Query 002021
Match_columns 979
No_of_seqs 988 out of 6644
Neff 9.4
Searched_HMMs 29240
Date Mon Mar 25 09:01:42 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/002021.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/002021hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3rgz_A Protein brassinosteroid 100.0 1.9E-79 6.5E-84 759.4 46.0 584 25-619 8-753 (768)
2 3rgz_A Protein brassinosteroid 100.0 4.6E-61 1.6E-65 594.9 36.0 488 73-581 179-742 (768)
3 1ziw_A TOLL-like receptor 3; i 100.0 2.9E-58 9.9E-63 564.9 38.9 521 72-607 25-626 (680)
4 4eco_A Uncharacterized protein 100.0 2E-59 7E-64 566.8 21.4 494 27-582 28-602 (636)
5 4ecn_A Leucine-rich repeat pro 100.0 6.7E-58 2.3E-62 561.1 31.7 496 25-580 265-864 (876)
6 3t6q_A CD180 antigen; protein- 100.0 1.6E-57 5.5E-62 550.7 34.7 504 62-584 14-564 (606)
7 3j0a_A TOLL-like receptor 5; m 100.0 3.4E-56 1.2E-60 557.0 38.1 516 60-606 14-563 (844)
8 3vq2_A TLR4, TOLL-like recepto 100.0 2.4E-56 8.1E-61 540.4 35.5 488 71-585 31-563 (606)
9 1ziw_A TOLL-like receptor 3; i 100.0 3.6E-56 1.2E-60 546.2 37.4 504 72-589 49-631 (680)
10 3t6q_A CD180 antigen; protein- 100.0 2.1E-56 7.2E-61 540.8 34.6 510 76-607 16-564 (606)
11 3vq2_A TLR4, TOLL-like recepto 100.0 5E-55 1.7E-59 528.8 31.7 502 76-607 15-562 (606)
12 2z81_A CD282 antigen, TOLL-lik 100.0 1E-52 3.5E-57 502.3 30.9 494 59-585 3-515 (549)
13 3j0a_A TOLL-like receptor 5; m 100.0 1.9E-50 6.4E-55 505.1 38.9 503 76-607 8-543 (844)
14 4asz_A BDNF/NT-3 growth factor 100.0 9E-53 3.1E-57 454.9 12.0 260 682-964 13-291 (299)
15 4aoj_A High affinity nerve gro 100.0 3.2E-52 1.1E-56 457.0 15.4 259 682-963 41-320 (329)
16 2z63_A TOLL-like receptor 4, v 100.0 1.2E-50 4.1E-55 487.0 29.8 482 77-586 12-537 (570)
17 3omv_A RAF proto-oncogene seri 100.0 1.5E-51 5.2E-56 444.9 18.7 263 681-964 35-302 (307)
18 4gt4_A Tyrosine-protein kinase 100.0 3.5E-52 1.2E-56 452.3 12.7 256 683-961 27-305 (308)
19 2z63_A TOLL-like receptor 4, v 100.0 1.3E-49 4.4E-54 478.0 33.8 465 71-561 27-536 (570)
20 2z81_A CD282 antigen, TOLL-lik 100.0 1.2E-49 4E-54 475.9 29.0 483 60-560 12-514 (549)
21 4eco_A Uncharacterized protein 100.0 1.6E-50 5.3E-55 489.1 19.6 506 26-607 24-604 (636)
22 4fih_A Serine/threonine-protei 100.0 6E-50 2.1E-54 437.5 18.3 250 682-956 74-324 (346)
23 2z7x_B TOLL-like receptor 1, v 100.0 2.7E-49 9.4E-54 469.2 24.8 461 76-585 4-486 (520)
24 4g3f_A NF-kappa-beta-inducing 100.0 9.8E-50 3.4E-54 434.6 16.5 256 682-964 58-318 (336)
25 4ase_A Vascular endothelial gr 100.0 4.4E-50 1.5E-54 443.5 13.9 271 672-964 54-349 (353)
26 4b9d_A Serine/threonine-protei 100.0 3.7E-50 1.3E-54 439.9 11.4 251 681-956 23-277 (350)
27 4aw0_A HPDK1, 3-phosphoinositi 100.0 4E-50 1.4E-54 432.2 11.4 250 682-956 32-285 (311)
28 3hmm_A TGF-beta receptor type- 100.0 1.9E-49 6.3E-54 432.4 15.3 277 683-963 4-298 (303)
29 4fie_A Serine/threonine-protei 100.0 9.6E-49 3.3E-53 438.6 19.3 250 682-956 151-401 (423)
30 3fpq_A Serine/threonine-protei 100.0 8E-49 2.7E-53 420.5 17.8 245 685-956 29-283 (290)
31 3hyh_A Carbon catabolite-derep 100.0 6.8E-49 2.3E-53 417.2 14.5 246 682-956 13-263 (275)
32 4ecn_A Leucine-rich repeat pro 100.0 1.8E-47 6.1E-52 468.9 26.7 490 96-609 323-872 (876)
33 4g8a_A TOLL-like receptor 4; l 100.0 9.9E-47 3.4E-51 459.1 33.0 488 72-584 52-584 (635)
34 2z7x_B TOLL-like receptor 1, v 100.0 1.3E-47 4.5E-52 454.7 23.9 441 72-560 21-485 (520)
35 3ubd_A Ribosomal protein S6 ki 100.0 6.8E-49 2.3E-53 423.0 7.9 248 682-956 24-282 (304)
36 4g8a_A TOLL-like receptor 4; l 100.0 3.3E-46 1.1E-50 454.5 31.9 529 52-607 15-584 (635)
37 3a79_B TLR6, VLRB.59, TOLL-lik 100.0 2.3E-46 7.8E-51 447.9 28.3 462 75-585 34-515 (562)
38 4g31_A Eukaryotic translation 100.0 1.4E-46 4.7E-51 407.3 14.4 250 682-956 5-280 (299)
39 3a79_B TLR6, VLRB.59, TOLL-lik 100.0 2.3E-44 7.7E-49 430.6 24.6 440 72-560 52-514 (562)
40 4f9c_A Cell division cycle 7-r 100.0 1.8E-44 6.2E-49 401.7 17.2 270 678-956 17-353 (361)
41 1jl5_A Outer protein YOPM; leu 100.0 1.8E-43 6.1E-48 408.6 25.6 405 95-605 10-431 (454)
42 4b99_A Mitogen-activated prote 100.0 3.4E-44 1.2E-48 403.6 18.2 269 682-956 54-345 (398)
43 3uto_A Twitchin; kinase, muscl 100.0 1.3E-43 4.5E-48 418.9 17.1 253 681-956 156-411 (573)
44 1jl5_A Outer protein YOPM; leu 100.0 2.4E-42 8.1E-47 399.2 27.0 406 72-585 11-434 (454)
45 1ogq_A PGIP-2, polygalacturona 100.0 6.6E-43 2.3E-47 384.6 21.1 293 25-337 2-302 (313)
46 3v47_A TOLL-like receptor 5B a 100.0 9.9E-42 3.4E-46 397.3 30.5 371 176-589 30-417 (455)
47 3v5w_A G-protein coupled recep 100.0 3.8E-43 1.3E-47 410.0 17.9 249 681-956 188-450 (689)
48 3v47_A TOLL-like receptor 5B a 100.0 6.2E-42 2.1E-46 399.0 26.1 365 96-512 30-412 (455)
49 2qkw_B Protein kinase; three-h 100.0 3.4E-42 1.2E-46 381.3 21.5 282 672-962 29-315 (321)
50 3uim_A Brassinosteroid insensi 100.0 2E-41 6.8E-46 376.2 20.4 282 668-959 16-308 (326)
51 3s95_A LIMK-1, LIM domain kina 100.0 1E-41 3.5E-46 375.6 17.4 264 682-966 10-286 (310)
52 3fxz_A Serine/threonine-protei 100.0 3.6E-41 1.2E-45 368.3 19.7 251 681-956 19-270 (297)
53 3soc_A Activin receptor type-2 100.0 1.4E-41 4.9E-46 376.2 15.7 276 681-963 23-319 (322)
54 2psq_A Fibroblast growth facto 100.0 1.8E-41 6.3E-46 382.2 16.4 262 681-965 80-367 (370)
55 2nru_A Interleukin-1 receptor- 100.0 5.3E-40 1.8E-44 361.4 26.2 281 669-962 12-306 (307)
56 3cbl_A C-FES, proto-oncogene t 100.0 7.9E-42 2.7E-46 386.6 11.5 261 681-964 113-376 (377)
57 3bz5_A Internalin-J, INLJ; leu 100.0 7.9E-40 2.7E-44 378.4 28.2 360 87-585 33-392 (457)
58 3p86_A Serine/threonine-protei 100.0 2.5E-41 8.5E-46 371.5 14.8 263 680-967 35-303 (309)
59 1csn_A Casein kinase-1; phosph 100.0 2.2E-40 7.6E-45 362.8 21.8 275 681-976 9-297 (298)
60 3kul_A Ephrin type-A receptor 100.0 3.7E-41 1.3E-45 373.1 14.5 260 682-964 49-315 (325)
61 3vhe_A Vascular endothelial gr 100.0 6.6E-41 2.3E-45 377.4 16.8 274 669-964 9-357 (359)
62 4hcu_A Tyrosine-protein kinase 100.0 3.7E-41 1.3E-45 363.0 13.9 257 682-963 10-267 (269)
63 3ugc_A Tyrosine-protein kinase 100.0 1.5E-41 5E-46 371.5 10.0 274 682-964 10-293 (295)
64 3sxs_A Cytoplasmic tyrosine-pr 100.0 6.2E-41 2.1E-45 361.1 14.4 259 681-964 7-266 (268)
65 3tki_A Serine/threonine-protei 100.0 2.1E-40 7.2E-45 366.6 18.7 254 681-956 6-262 (323)
66 2izr_A Casein kinase I isoform 100.0 2.5E-40 8.6E-45 367.8 18.4 275 681-975 8-294 (330)
67 2c30_A Serine/threonine-protei 100.0 5.1E-40 1.7E-44 363.3 20.7 262 670-956 23-295 (321)
68 3fe3_A MAP/microtubule affinit 100.0 6.6E-41 2.3E-45 370.6 12.9 249 680-956 13-265 (328)
69 1tki_A Titin; serine kinase, m 100.0 2.1E-40 7.3E-45 366.0 16.8 253 681-957 4-259 (321)
70 3zgw_A Maternal embryonic leuc 100.0 8.1E-41 2.8E-45 371.9 13.5 251 680-956 8-261 (347)
71 3lb7_A RAF proto-oncogene seri 100.0 4.1E-40 1.4E-44 361.7 18.7 263 681-964 35-302 (307)
72 2qol_A Ephrin receptor; recept 100.0 9.2E-41 3.2E-45 376.7 13.6 259 682-963 45-310 (373)
73 2yab_A Death-associated protei 100.0 4.9E-40 1.7E-44 368.0 19.3 252 681-956 11-273 (361)
74 3bz5_A Internalin-J, INLJ; leu 100.0 5E-39 1.7E-43 371.7 27.9 358 106-602 28-386 (457)
75 1luf_A Muscle-specific tyrosin 100.0 9.9E-41 3.4E-45 373.5 12.4 268 678-968 43-341 (343)
76 4aw2_A Serine/threonine-protei 100.0 5.7E-41 2E-45 383.8 10.6 262 674-956 66-339 (437)
77 3niz_A Rhodanese family protei 100.0 9.1E-40 3.1E-44 359.7 19.8 269 681-956 20-301 (311)
78 3gen_A Tyrosine-protein kinase 100.0 1.6E-40 5.6E-45 360.9 13.6 258 681-963 23-281 (283)
79 3op5_A Serine/threonine-protei 100.0 3.3E-40 1.1E-44 371.9 15.3 283 681-977 34-344 (364)
80 1o6l_A RAC-beta serine/threoni 100.0 3.6E-40 1.2E-44 365.6 15.3 249 681-956 4-261 (337)
81 1o6v_A Internalin A; bacterial 100.0 2.1E-38 7.3E-43 369.5 31.0 211 96-339 46-256 (466)
82 3tt0_A Basic fibroblast growth 100.0 3.7E-40 1.3E-44 373.9 15.4 267 681-970 68-360 (382)
83 1t46_A HOMO sapiens V-KIT hard 100.0 7.2E-40 2.5E-44 361.4 17.4 264 681-966 22-311 (313)
84 1rjb_A FL cytokine receptor; k 100.0 7.2E-40 2.5E-44 366.5 17.5 267 680-968 43-340 (344)
85 3poz_A Epidermal growth factor 100.0 2.5E-40 8.7E-45 367.0 13.2 258 682-963 15-279 (327)
86 3q4u_A Activin receptor type-1 100.0 2.4E-39 8.3E-44 355.1 20.8 265 681-960 7-300 (301)
87 3l9p_A Anaplastic lymphoma kin 100.0 1.1E-40 3.9E-45 375.5 10.1 259 682-963 71-346 (367)
88 2ivs_A Proto-oncogene tyrosine 100.0 4.3E-40 1.5E-44 363.4 14.2 260 681-963 22-312 (314)
89 2y0a_A Death-associated protei 100.0 1.5E-39 5.3E-44 360.3 18.6 251 682-956 11-272 (326)
90 1k9a_A Carboxyl-terminal SRC k 100.0 1.1E-39 3.6E-44 377.7 17.5 252 681-963 192-446 (450)
91 1qcf_A Haematopoetic cell kina 100.0 1.8E-40 6E-45 385.0 10.9 264 680-969 186-451 (454)
92 3h4j_B AMPK kdaid, SNF1-like p 100.0 6E-40 2.1E-44 363.5 14.6 247 681-956 8-259 (336)
93 4eqm_A Protein kinase; transfe 100.0 1E-39 3.5E-44 356.4 16.2 261 681-962 10-275 (294)
94 1o6v_A Internalin A; bacterial 100.0 5.5E-38 1.9E-42 366.0 31.9 345 118-532 44-388 (466)
95 3mdy_A Bone morphogenetic prot 100.0 3.4E-39 1.1E-43 360.1 20.7 274 673-964 28-333 (337)
96 1kob_A Twitchin; kinase, intra 100.0 9.3E-40 3.2E-44 369.0 16.3 253 681-956 50-305 (387)
97 3kex_A Receptor tyrosine-prote 100.0 4.4E-40 1.5E-44 364.9 13.3 258 682-963 13-277 (325)
98 3uzp_A CKI-delta, CKID, casein 100.0 3E-39 1E-43 353.4 19.7 276 681-977 8-295 (296)
99 4euu_A Serine/threonine-protei 100.0 2.5E-39 8.5E-44 358.0 19.2 273 682-960 9-307 (319)
100 3c0i_A Peripheral plasma membr 100.0 9.2E-40 3.2E-44 365.9 15.4 252 682-956 24-287 (351)
101 3soa_A Calcium/calmodulin-depe 100.0 1.2E-39 4E-44 374.5 16.4 254 680-956 9-268 (444)
102 1ob3_A PFPK5, cell division co 100.0 1.2E-39 3.9E-44 355.1 15.4 268 682-956 2-281 (288)
103 4f0f_A Serine/threonine-protei 100.0 3.9E-39 1.3E-43 350.8 19.6 253 681-960 18-287 (287)
104 2bdw_A Hypothetical protein K1 100.0 1.3E-39 4.3E-44 365.8 16.1 253 680-956 27-285 (362)
105 1mp8_A Focal adhesion kinase 1 100.0 6.5E-40 2.2E-44 355.7 13.2 260 681-965 14-279 (281)
106 3o0g_A Cell division protein k 100.0 2.4E-39 8.3E-44 353.3 17.8 269 682-956 2-283 (292)
107 2zv2_A Calcium/calmodulin-depe 100.0 1.9E-39 6.4E-44 355.3 16.9 250 681-956 12-293 (298)
108 3t9t_A Tyrosine-protein kinase 100.0 7.3E-40 2.5E-44 352.5 13.1 257 682-963 8-265 (267)
109 4hgt_A Casein kinase I isoform 100.0 4.2E-39 1.4E-43 352.2 19.3 275 680-975 7-293 (296)
110 2x4f_A Myosin light chain kina 100.0 1.2E-39 4.3E-44 367.2 15.3 247 687-956 94-343 (373)
111 3v8s_A RHO-associated protein 100.0 5.9E-40 2E-44 372.6 12.7 259 675-956 62-330 (410)
112 2jii_A Serine/threonine-protei 100.0 1.5E-39 5.2E-44 364.8 15.9 278 682-978 42-352 (352)
113 3og7_A AKAP9-BRAF fusion prote 100.0 1.6E-39 5.4E-44 354.2 15.5 260 681-962 23-288 (289)
114 4dc2_A Protein kinase C IOTA t 100.0 1.1E-39 3.7E-44 368.3 14.4 255 681-956 51-319 (396)
115 3txo_A PKC-L, NPKC-ETA, protei 100.0 4E-40 1.4E-44 367.8 10.7 249 681-956 22-281 (353)
116 3qup_A Tyrosine-protein kinase 100.0 9.2E-40 3.1E-44 362.3 13.5 260 681-963 22-299 (323)
117 2eva_A TAK1 kinase - TAB1 chim 100.0 5.2E-39 1.8E-43 353.1 19.1 256 682-965 8-266 (307)
118 4e5w_A Tyrosine-protein kinase 100.0 1.3E-39 4.4E-44 357.5 14.1 272 682-961 21-301 (302)
119 2xir_A Vascular endothelial gr 100.0 2.3E-39 7.7E-44 358.0 16.0 273 671-965 16-313 (316)
120 3lxl_A Tyrosine-protein kinase 100.0 9.2E-40 3.1E-44 362.8 12.5 275 682-965 23-306 (327)
121 2pvf_A Fibroblast growth facto 100.0 2E-39 6.9E-44 361.1 15.2 263 681-966 34-322 (334)
122 3dtc_A Mitogen-activated prote 100.0 2.4E-39 8.4E-44 349.2 15.3 251 681-960 6-271 (271)
123 2vd5_A DMPK protein; serine/th 100.0 1.2E-39 4E-44 370.4 13.3 262 674-956 53-328 (412)
124 1fot_A TPK1 delta, CAMP-depend 100.0 2.4E-39 8.3E-44 356.5 15.0 245 682-956 6-259 (318)
125 2i1m_A Macrophage colony-stimu 100.0 1.6E-39 5.5E-44 362.0 13.7 266 678-965 42-329 (333)
126 2id5_A Lingo-1, leucine rich r 100.0 2E-38 6.8E-43 371.5 23.7 345 228-607 15-360 (477)
127 2w4o_A Calcium/calmodulin-depe 100.0 3.3E-39 1.1E-43 360.9 16.2 252 680-956 51-306 (349)
128 4fr4_A YANK1, serine/threonine 100.0 7.7E-39 2.6E-43 360.2 18.8 249 682-955 15-271 (384)
129 1fmk_A C-SRC, P60-SRC, tyrosin 100.0 9.8E-40 3.4E-44 378.2 11.8 262 681-968 183-446 (452)
130 4fvq_A Tyrosine-protein kinase 100.0 1.8E-39 6.3E-44 353.8 12.9 252 682-963 8-276 (289)
131 2ozo_A Tyrosine-protein kinase 100.0 3.2E-39 1.1E-43 386.7 16.1 264 689-976 343-612 (613)
132 1qpc_A LCK kinase; alpha beta 100.0 2.1E-39 7.3E-44 351.3 13.1 260 681-966 12-273 (279)
133 3gni_B Strad alpha; kinase fol 100.0 5.3E-39 1.8E-43 365.7 16.9 273 681-956 24-334 (389)
134 3c1x_A Hepatocyte growth facto 100.0 1.3E-39 4.4E-44 366.8 11.6 262 684-968 91-361 (373)
135 1xjd_A Protein kinase C, theta 100.0 1E-39 3.5E-44 363.0 10.6 251 679-956 14-270 (345)
136 2yex_A Serine/threonine-protei 100.0 1.2E-38 4.1E-43 344.8 18.6 253 682-956 7-262 (276)
137 2pmi_A Negative RE, cyclin-dep 100.0 7.9E-39 2.7E-43 353.4 17.1 269 681-956 4-294 (317)
138 3lzb_A Epidermal growth factor 100.0 1.9E-39 6.5E-44 359.8 12.2 258 682-963 15-279 (327)
139 1u59_A Tyrosine-protein kinase 100.0 5.2E-39 1.8E-43 349.8 15.2 263 682-968 9-278 (287)
140 3f3z_A Calcium/calmodulin-depe 100.0 9.1E-39 3.1E-43 346.0 17.0 251 681-956 8-262 (277)
141 3kmu_A ILK, integrin-linked ki 100.0 5.6E-39 1.9E-43 346.3 15.3 251 682-962 10-270 (271)
142 3f66_A Hepatocyte growth facto 100.0 1.2E-38 4.2E-43 348.9 18.1 263 682-967 25-296 (298)
143 3g2f_A Bone morphogenetic prot 100.0 4.1E-39 1.4E-43 359.2 14.6 280 681-969 12-325 (336)
144 2w1i_A JAK2; chromosomal rearr 100.0 4.1E-39 1.4E-43 357.3 14.5 275 682-965 41-325 (326)
145 1p4o_A Insulin-like growth fac 100.0 4.4E-40 1.5E-44 364.7 6.7 272 675-969 18-306 (322)
146 1opk_A P150, C-ABL, proto-onco 100.0 2E-39 7E-44 379.5 12.6 256 681-961 219-477 (495)
147 3lxp_A Non-receptor tyrosine-p 100.0 5.5E-39 1.9E-43 354.9 15.2 273 684-967 33-315 (318)
148 3a62_A Ribosomal protein S6 ki 100.0 4.4E-39 1.5E-43 356.8 14.4 249 681-956 16-277 (327)
149 3p1a_A MYT1 kinase, membrane-a 100.0 7.6E-39 2.6E-43 352.5 15.9 245 682-956 57-305 (311)
150 3a8x_A Protein kinase C IOTA t 100.0 3.6E-39 1.2E-43 359.4 13.4 254 682-956 9-276 (345)
151 1b6c_B TGF-B superfamily recep 100.0 4.6E-38 1.6E-42 351.6 22.3 278 672-964 32-338 (342)
152 3cc6_A Protein tyrosine kinase 100.0 4.7E-39 1.6E-43 349.0 13.5 259 681-964 11-275 (281)
153 1rdq_E PKA C-alpha, CAMP-depen 100.0 3.9E-39 1.3E-43 359.6 13.1 245 682-956 41-294 (350)
154 3cok_A Serine/threonine-protei 100.0 6E-39 2E-43 347.6 14.2 250 681-956 10-263 (278)
155 2wqm_A Serine/threonine-protei 100.0 1.3E-38 4.4E-43 350.8 17.0 267 680-968 30-303 (310)
156 3hko_A Calcium/calmodulin-depe 100.0 9.6E-39 3.3E-43 357.6 16.3 257 680-956 24-331 (345)
157 3kn6_A Ribosomal protein S6 ki 100.0 9E-39 3.1E-43 353.8 15.8 249 687-956 16-271 (325)
158 3pls_A Macrophage-stimulating 100.0 2.3E-38 7.9E-43 346.7 18.9 262 684-967 23-292 (298)
159 1mqb_A Ephrin type-A receptor 100.0 6.2E-39 2.1E-43 356.7 14.4 260 682-964 44-311 (333)
160 2i0e_A Protein kinase C-beta I 100.0 3.7E-39 1.3E-43 359.7 12.6 249 681-956 19-277 (353)
161 3brb_A Proto-oncogene tyrosine 100.0 6E-39 2E-43 354.0 13.9 263 680-965 32-311 (313)
162 2a2a_A Death-associated protei 100.0 1.9E-38 6.4E-43 351.2 17.9 252 681-956 11-273 (321)
163 3uc3_A Serine/threonine-protei 100.0 7.9E-39 2.7E-43 359.4 15.1 253 681-956 19-275 (361)
164 3dbq_A Dual specificity protei 100.0 6E-39 2E-43 358.5 13.8 253 681-957 8-275 (343)
165 4eut_A Serine/threonine-protei 100.0 9.7E-39 3.3E-43 363.8 15.7 277 682-964 9-311 (396)
166 2h34_A Serine/threonine-protei 100.0 1E-38 3.6E-43 351.1 15.4 271 681-974 33-308 (309)
167 3qd2_B Eukaryotic translation 100.0 1.1E-38 3.7E-43 355.1 15.7 251 681-956 5-326 (332)
168 2buj_A Serine/threonine-protei 100.0 8.4E-39 2.9E-43 353.5 14.2 263 681-964 28-308 (317)
169 3fdn_A Serine/threonine-protei 100.0 7.5E-39 2.6E-43 347.0 13.5 247 681-956 8-258 (279)
170 2y94_A 5'-AMP-activated protei 100.0 9.8E-39 3.3E-43 369.1 15.1 247 682-956 16-267 (476)
171 3kk8_A Calcium/calmodulin depe 100.0 1.6E-38 5.6E-43 345.3 16.0 252 681-956 5-262 (284)
172 3e7e_A HBUB1, BUB1A, mitotic c 100.0 3.3E-38 1.1E-42 355.8 19.1 256 680-966 63-343 (365)
173 3ork_A Serine/threonine protei 100.0 2.7E-39 9.3E-44 356.2 9.9 261 681-962 11-281 (311)
174 3mtl_A Cell division protein k 100.0 8.6E-39 2.9E-43 354.2 13.9 268 682-956 2-282 (324)
175 3kfa_A Tyrosine-protein kinase 100.0 6.7E-39 2.3E-43 349.1 12.7 259 680-963 11-272 (288)
176 2qr7_A Ribosomal protein S6 ki 100.0 4.7E-39 1.6E-43 358.0 11.7 252 681-956 21-278 (342)
177 3g33_A Cell division protein k 100.0 3.3E-38 1.1E-42 347.2 17.9 269 680-956 7-297 (308)
178 2eue_A Carbon catabolite derep 100.0 8.6E-39 2.9E-43 345.8 12.9 247 681-956 12-263 (275)
179 1nxk_A MAP kinase-activated pr 100.0 2.4E-38 8.3E-43 360.2 17.3 250 682-957 61-323 (400)
180 3sv0_A Casein kinase I-like; t 100.0 6.2E-38 2.1E-42 363.0 20.9 276 681-975 6-291 (483)
181 3i6u_A CDS1, serine/threonine- 100.0 5.1E-38 1.7E-42 360.1 19.9 253 680-956 133-400 (419)
182 3dls_A PAS domain-containing s 100.0 7.1E-39 2.4E-43 356.1 12.4 243 680-956 22-275 (335)
183 3ttj_A Mitogen-activated prote 100.0 3.6E-38 1.2E-42 365.2 18.7 262 681-956 61-356 (464)
184 2zmd_A Dual specificity protei 100.0 1.5E-38 5E-43 361.0 15.1 251 682-956 56-321 (390)
185 4agu_A Cyclin-dependent kinase 100.0 3.1E-38 1E-42 348.0 16.9 265 682-956 3-285 (311)
186 2ac3_A MAP kinase-interacting 100.0 1.2E-38 4.1E-43 352.2 13.5 268 682-956 12-296 (316)
187 2h8h_A Proto-oncogene tyrosine 100.0 3.5E-39 1.2E-43 381.0 9.8 262 681-968 266-529 (535)
188 1u5q_A Serine/threonine protei 100.0 1.5E-38 5.2E-43 355.0 14.4 247 682-957 54-307 (348)
189 3gxj_A TGF-beta receptor type- 100.0 5.4E-40 1.8E-44 360.6 2.5 276 682-963 3-298 (303)
190 1byg_A CSK, protein (C-termina 100.0 9E-39 3.1E-43 346.2 12.0 253 681-964 20-275 (278)
191 3n9x_A Phosphotransferase; mal 100.0 4.1E-38 1.4E-42 362.6 18.1 271 681-956 25-362 (432)
192 1fvr_A Tyrosine-protein kinase 100.0 1.6E-38 5.4E-43 352.9 14.0 261 682-968 25-306 (327)
193 2acx_A G protein-coupled recep 100.0 3.2E-38 1.1E-42 369.1 17.2 251 681-956 183-445 (576)
194 2v62_A Serine/threonine-protei 100.0 1.5E-38 5.1E-43 355.6 13.5 266 682-962 37-328 (345)
195 2yfx_A Tyrosine-protein kinase 100.0 9.7E-39 3.3E-43 354.6 11.9 260 681-963 29-305 (327)
196 3llt_A Serine/threonine kinase 100.0 3.1E-38 1.1E-42 355.6 15.9 276 670-956 23-356 (360)
197 3gbz_A Kinase, CMGC CDK; ssgci 100.0 2.1E-38 7.3E-43 351.9 14.1 271 678-956 30-319 (329)
198 3oz6_A Mitogen-activated prote 100.0 2.2E-38 7.4E-43 360.4 14.3 269 680-956 7-329 (388)
199 3bhy_A Death-associated protei 100.0 5.9E-38 2E-42 340.7 17.0 251 682-956 5-266 (283)
200 4ejn_A RAC-alpha serine/threon 100.0 5.6E-39 1.9E-43 371.8 9.5 249 681-956 147-405 (446)
201 3is5_A Calcium-dependent prote 100.0 2.4E-38 8.3E-43 344.0 13.9 250 682-956 22-279 (285)
202 1ua2_A CAK, cell division prot 100.0 5.4E-38 1.8E-42 351.2 16.8 271 679-956 7-292 (346)
203 1xbb_A Tyrosine-protein kinase 100.0 2.6E-38 8.9E-43 345.0 13.3 259 682-965 16-282 (291)
204 2id5_A Lingo-1, leucine rich r 100.0 4.6E-37 1.6E-41 359.9 24.6 347 147-585 14-361 (477)
205 2jam_A Calcium/calmodulin-depe 100.0 3.8E-38 1.3E-42 346.0 14.3 251 681-956 8-262 (304)
206 2r5t_A Serine/threonine-protei 100.0 1.3E-38 4.4E-43 357.8 10.4 244 681-951 37-285 (373)
207 2clq_A Mitogen-activated prote 100.0 1.2E-37 4E-42 340.6 17.7 252 682-956 22-279 (295)
208 3pg1_A Mitogen-activated prote 100.0 9.9E-38 3.4E-42 351.8 17.6 277 672-956 12-317 (362)
209 2y7j_A Phosphorylase B kinase 100.0 8.2E-38 2.8E-42 351.9 16.8 258 675-956 87-360 (365)
210 3rp9_A Mitogen-activated prote 100.0 6.4E-38 2.2E-42 364.6 16.1 196 681-881 52-281 (458)
211 3ll6_A Cyclin G-associated kin 100.0 6.2E-38 2.1E-42 349.8 15.1 260 682-968 28-314 (337)
212 3c4z_A Rhodopsin kinase; Ser/T 100.0 1.1E-37 3.6E-42 364.2 17.7 253 682-956 185-449 (543)
213 2pml_X PFPK7, Ser/Thr protein 100.0 1.3E-37 4.3E-42 349.0 17.7 265 681-956 30-323 (348)
214 3nsz_A CK II alpha, casein kin 100.0 1.1E-37 3.6E-42 346.8 16.9 262 682-956 36-320 (330)
215 1t4h_A Serine/threonine-protei 100.0 1.6E-37 5.4E-42 338.6 17.9 247 683-956 27-283 (290)
216 2vgo_A Serine/threonine-protei 100.0 5.5E-38 1.9E-42 341.1 14.2 246 682-956 14-263 (284)
217 4fl3_A Tyrosine-protein kinase 100.0 4.3E-38 1.5E-42 377.7 14.5 253 688-965 375-634 (635)
218 3com_A Serine/threonine-protei 100.0 6.1E-38 2.1E-42 346.2 14.4 252 680-956 27-279 (314)
219 2a19_B Interferon-induced, dou 100.0 3.8E-38 1.3E-42 342.4 12.5 251 681-966 10-278 (284)
220 2rku_A Serine/threonine-protei 100.0 4.5E-38 1.5E-42 343.7 13.0 250 681-957 14-267 (294)
221 2j7t_A Serine/threonine-protei 100.0 3.9E-38 1.3E-42 345.7 12.5 253 681-956 18-276 (302)
222 3lm5_A Serine/threonine-protei 100.0 1.1E-37 3.8E-42 345.8 16.0 253 681-956 27-288 (327)
223 3q5i_A Protein kinase; CDPK, m 100.0 1.8E-37 6.2E-42 364.8 18.2 252 680-956 34-302 (504)
224 3a7i_A MST3 kinase, serine/thr 100.0 9.2E-38 3.2E-42 342.8 14.7 250 682-958 22-273 (303)
225 3mi9_A Cell division protein k 100.0 1.9E-37 6.5E-42 347.8 17.3 272 681-956 16-312 (351)
226 3mwu_A Calmodulin-domain prote 100.0 9.5E-38 3.3E-42 365.7 15.5 251 681-956 21-277 (486)
227 3fme_A Dual specificity mitoge 100.0 6.2E-38 2.1E-42 341.9 12.9 251 681-956 6-267 (290)
228 4aaa_A Cyclin-dependent kinase 100.0 4.2E-38 1.4E-42 350.0 11.7 268 681-956 24-307 (331)
229 2owb_A Serine/threonine-protei 100.0 4.8E-38 1.7E-42 349.9 12.1 249 681-956 40-292 (335)
230 1u46_A ACK-1, activated CDC42 100.0 1.9E-38 6.5E-43 346.1 8.6 259 682-963 18-285 (291)
231 3lij_A Calcium/calmodulin depe 100.0 1.5E-37 5.1E-42 364.7 16.6 251 681-956 36-292 (494)
232 3nyv_A Calmodulin-domain prote 100.0 6.6E-38 2.3E-42 367.2 13.5 250 682-956 26-282 (484)
233 3eb0_A Putative uncharacterize 100.0 1.7E-37 5.7E-42 352.3 16.4 272 679-962 4-330 (383)
234 2xrw_A Mitogen-activated prote 100.0 4.4E-37 1.5E-41 347.1 19.4 262 681-957 24-320 (371)
235 3byv_A Rhoptry kinase; malaria 100.0 1.2E-38 4.2E-43 360.8 6.5 241 681-956 72-360 (377)
236 1vzo_A Ribosomal protein S6 ki 100.0 8.6E-38 3E-42 350.5 13.3 254 682-957 54-323 (355)
237 2ycf_A Serine/threonine-protei 100.0 3.6E-37 1.2E-41 341.1 18.1 252 681-956 9-275 (322)
238 3an0_A Dual specificity mitoge 100.0 1.3E-37 4.3E-42 347.7 14.4 252 680-956 49-311 (340)
239 1cm8_A Phosphorylated MAP kina 100.0 1.1E-37 3.8E-42 350.9 13.8 263 681-956 24-308 (367)
240 3q60_A ROP5B; pseudokinase, tr 100.0 2.7E-38 9.2E-43 357.3 8.4 254 682-956 62-353 (371)
241 2w5a_A Serine/threonine-protei 100.0 2.7E-38 9.2E-43 342.7 7.8 254 681-959 5-271 (279)
242 2h6d_A 5'-AMP-activated protei 100.0 1.3E-37 4.5E-42 336.7 12.9 248 681-956 10-262 (276)
243 2y4i_B KSR2, HKSR2, kinase sup 100.0 4.2E-38 1.4E-42 348.3 9.0 273 680-977 31-317 (319)
244 2vwi_A Serine/threonine-protei 100.0 5.8E-38 2E-42 344.4 9.9 264 679-956 12-288 (303)
245 3eqc_A Dual specificity mitoge 100.0 3.9E-38 1.3E-42 354.7 8.8 265 682-956 33-325 (360)
246 2wtk_C Serine/threonine-protei 100.0 3E-37 1E-41 339.1 15.4 251 681-956 4-264 (305)
247 1phk_A Phosphorylase kinase; g 100.0 3.2E-37 1.1E-41 337.7 15.5 253 680-956 15-284 (298)
248 2fst_X Mitogen-activated prote 100.0 1.9E-37 6.6E-42 348.5 14.0 263 681-956 28-312 (367)
249 1x8b_A WEE1HU, WEE1-like prote 100.0 3.8E-37 1.3E-41 335.2 15.6 244 681-956 10-280 (289)
250 2r3i_A Cell division protein k 100.0 5E-37 1.7E-41 336.3 16.5 268 682-956 3-284 (299)
251 3o6n_A APL1; leucine-rich repe 100.0 4.8E-36 1.7E-40 341.5 24.5 348 51-509 4-353 (390)
252 2x7f_A TRAF2 and NCK-interacti 100.0 1.8E-37 6E-42 344.4 12.3 256 676-956 18-287 (326)
253 3kvw_A DYRK2, dual specificity 100.0 5.5E-37 1.9E-41 352.4 16.7 197 681-887 96-302 (429)
254 3pfq_A PKC-B, PKC-beta, protei 100.0 2E-37 6.9E-42 374.5 13.5 250 680-956 339-598 (674)
255 1wak_A Serine/threonine-protei 100.0 4E-37 1.4E-41 351.6 14.5 265 681-956 36-392 (397)
256 3qyz_A Mitogen-activated prote 100.0 7E-37 2.4E-41 344.7 16.2 268 681-956 26-314 (364)
257 3cek_A Dual specificity protei 100.0 1.3E-37 4.5E-42 343.2 9.8 256 678-957 24-294 (313)
258 2j0j_A Focal adhesion kinase 1 100.0 3E-37 1E-41 371.8 13.4 259 681-964 389-653 (656)
259 1zy4_A Serine/threonine-protei 100.0 5.8E-37 2E-41 336.3 13.9 253 681-956 5-284 (303)
260 1j1b_A Glycogen synthase kinas 100.0 9.2E-37 3.1E-41 349.8 16.1 263 682-956 54-337 (420)
261 4exu_A Mitogen-activated prote 100.0 8E-37 2.7E-41 344.9 15.1 262 681-956 41-324 (371)
262 4e7w_A Glycogen synthase kinas 100.0 6.4E-37 2.2E-41 348.2 14.2 264 682-956 40-322 (394)
263 2i6l_A Mitogen-activated prote 100.0 7.5E-37 2.6E-41 338.3 14.0 269 681-956 10-306 (320)
264 1blx_A Cyclin-dependent kinase 100.0 2.3E-36 7.9E-41 335.4 17.8 269 680-956 9-297 (326)
265 2wei_A Calmodulin-domain prote 100.0 1.1E-36 3.9E-41 331.2 14.5 253 679-956 19-277 (287)
266 3oja_B Anopheles plasmodium-re 100.0 1.5E-35 5E-40 356.2 25.5 347 51-510 10-360 (597)
267 3rgf_A Cyclin-dependent kinase 100.0 1.8E-36 6.1E-41 346.5 16.1 268 683-956 21-334 (405)
268 1z57_A Dual specificity protei 100.0 2.1E-36 7.1E-41 337.7 16.1 265 681-956 13-329 (339)
269 2b9h_A MAP kinase FUS3, mitoge 100.0 1.1E-36 3.7E-41 342.1 13.7 269 681-956 10-306 (353)
270 3fhr_A MAP kinase-activated pr 100.0 1.4E-36 4.6E-41 338.1 13.9 253 681-957 27-289 (336)
271 3o6n_A APL1; leucine-rich repe 100.0 2.7E-35 9.2E-40 335.3 24.4 334 249-607 45-378 (390)
272 2iwi_A Serine/threonine-protei 100.0 7E-37 2.4E-41 337.3 10.9 245 677-956 26-284 (312)
273 3e3p_A Protein kinase, putativ 100.0 6.6E-36 2.3E-40 336.6 18.2 275 675-956 16-315 (360)
274 1ogq_A PGIP-2, polygalacturona 100.0 6E-36 2.1E-40 329.1 17.1 258 352-614 50-312 (313)
275 3coi_A Mitogen-activated prote 100.0 3.2E-36 1.1E-40 338.0 15.1 262 681-956 23-306 (353)
276 4fcg_A Uncharacterized protein 100.0 8.3E-36 2.8E-40 329.9 18.2 273 25-312 23-316 (328)
277 3p23_A Serine/threonine-protei 100.0 2.1E-36 7.1E-41 347.1 13.5 250 682-956 24-284 (432)
278 3aln_A Dual specificity mitoge 100.0 2.2E-36 7.5E-41 335.7 13.2 254 681-956 21-286 (327)
279 2vx3_A Dual specificity tyrosi 100.0 3.2E-36 1.1E-40 341.6 14.8 201 679-887 51-261 (382)
280 3a99_A Proto-oncogene serine/t 100.0 6.1E-37 2.1E-41 338.7 8.6 244 678-956 39-294 (320)
281 2rio_A Serine/threonine-protei 100.0 4.5E-36 1.6E-40 345.6 15.0 250 684-956 17-296 (434)
282 2eu9_A Dual specificity protei 100.0 8.7E-36 3E-40 335.0 16.4 264 681-956 18-334 (355)
283 3oja_B Anopheles plasmodium-re 100.0 6E-35 2E-39 350.9 24.4 334 249-607 51-384 (597)
284 1q8y_A SR protein kinase; tran 100.0 3.3E-36 1.1E-40 340.9 12.3 265 682-956 19-334 (373)
285 2dyl_A Dual specificity mitoge 100.0 4.5E-36 1.6E-40 331.8 12.2 252 681-956 24-284 (318)
286 4fmz_A Internalin; leucine ric 100.0 4.5E-34 1.5E-38 319.9 25.9 307 220-580 40-346 (347)
287 3qa8_A MGC80376 protein; kinas 100.0 1.2E-35 4.2E-40 350.1 13.1 272 681-962 13-309 (676)
288 4fmz_A Internalin; leucine ric 100.0 1.5E-33 5.1E-38 315.6 27.8 305 198-556 42-346 (347)
289 3uqc_A Probable conserved tran 100.0 7.2E-35 2.4E-39 316.0 16.3 234 682-965 31-268 (286)
290 2pzi_A Probable serine/threoni 100.0 2E-34 6.9E-39 351.0 17.8 242 681-963 79-329 (681)
291 3m2w_A MAP kinase-activated pr 100.0 3E-34 1E-38 314.1 16.7 231 682-957 17-258 (299)
292 3dzo_A Rhoptry kinase domain; 100.0 7E-35 2.4E-39 333.4 11.0 240 682-956 78-364 (413)
293 2vuw_A Serine/threonine-protei 100.0 3.3E-34 1.1E-38 319.3 8.8 244 682-956 20-332 (336)
294 1xku_A Decorin; proteoglycan, 100.0 6.5E-32 2.2E-36 299.9 26.5 292 76-411 35-330 (330)
295 2ft3_A Biglycan; proteoglycan, 100.0 2.8E-32 9.6E-37 303.1 23.4 291 76-411 37-331 (332)
296 1z7x_W Ribonuclease inhibitor; 100.0 1.6E-35 5.5E-40 345.5 -3.1 360 144-532 3-411 (461)
297 2ft3_A Biglycan; proteoglycan, 100.0 5.6E-32 1.9E-36 300.6 22.8 268 249-578 54-331 (332)
298 1xku_A Decorin; proteoglycan, 100.0 1.2E-31 4E-36 297.9 24.5 269 249-578 52-330 (330)
299 1z7x_W Ribonuclease inhibitor; 100.0 7.3E-35 2.5E-39 339.8 -2.2 360 200-582 3-413 (461)
300 3ogk_B Coronatine-insensitive 100.0 1.1E-33 3.8E-38 340.9 -2.2 450 59-577 41-548 (592)
301 2z80_A TOLL-like receptor 2, v 100.0 2.6E-30 9E-35 289.8 17.4 91 53-157 23-113 (353)
302 2z66_A Variable lymphocyte rec 100.0 2.9E-30 1E-34 283.4 16.2 252 60-340 7-262 (306)
303 3g06_A SSPH2 (leucine-rich rep 100.0 1.4E-29 4.9E-34 300.8 20.5 290 47-397 10-305 (622)
304 2z66_A Variable lymphocyte rec 100.0 1E-29 3.6E-34 278.9 16.6 273 330-608 11-292 (306)
305 3ogk_B Coronatine-insensitive 100.0 3.8E-31 1.3E-35 318.7 1.8 413 135-582 64-528 (592)
306 3zyi_A Leucine-rich repeat-con 100.0 1.2E-28 4.2E-33 285.9 22.3 244 77-339 59-303 (452)
307 2z80_A TOLL-like receptor 2, v 100.0 1.4E-29 4.6E-34 284.0 13.1 280 251-584 33-318 (353)
308 1wwl_A Monocyte differentiatio 100.0 4.7E-30 1.6E-34 282.2 8.9 250 92-390 39-310 (312)
309 3zyi_A Leucine-rich repeat-con 100.0 1.9E-28 6.6E-33 284.2 21.5 249 329-584 57-307 (452)
310 3zyj_A Leucine-rich repeat-con 100.0 2.6E-28 9E-33 282.0 22.0 250 328-584 45-296 (440)
311 1wwl_A Monocyte differentiatio 100.0 1.5E-30 5E-35 286.2 2.8 267 51-340 22-310 (312)
312 4fcg_A Uncharacterized protein 100.0 1.4E-28 4.7E-33 272.0 17.6 224 353-580 82-314 (328)
313 1ozn_A Reticulon 4 receptor; N 100.0 2.3E-28 7.8E-33 265.3 17.6 227 75-313 14-241 (285)
314 3zyj_A Leucine-rich repeat-con 100.0 8.5E-28 2.9E-32 277.8 23.3 244 77-339 48-292 (440)
315 1ozn_A Reticulon 4 receptor; N 100.0 1.9E-28 6.4E-33 266.0 15.8 251 329-585 14-266 (285)
316 3oja_A Leucine-rich immune mol 100.0 3.3E-30 1.1E-34 300.6 2.1 217 377-605 35-252 (487)
317 2p1m_B Transport inhibitor res 100.0 1.8E-31 6.2E-36 321.8 -9.8 461 59-580 34-544 (594)
318 3o53_A Protein LRIM1, AGAP0063 100.0 4.4E-29 1.5E-33 275.1 8.4 268 226-562 12-282 (317)
319 3g06_A SSPH2 (leucine-rich rep 99.9 2.7E-27 9.2E-32 281.3 22.4 268 225-567 41-308 (622)
320 3o53_A Protein LRIM1, AGAP0063 99.9 1E-28 3.6E-33 272.1 7.4 269 201-538 11-282 (317)
321 2o6q_A Variable lymphocyte rec 99.9 1.7E-26 5.9E-31 248.2 19.1 218 57-311 2-219 (270)
322 4azs_A Methyltransferase WBDD; 99.9 1.2E-28 4.2E-33 291.1 0.7 186 689-884 241-438 (569)
323 3oja_A Leucine-rich immune mol 99.9 5.1E-27 1.8E-31 273.6 12.5 235 249-551 34-270 (487)
324 2z62_A TOLL-like receptor 4, v 99.9 8.6E-26 2.9E-30 243.7 17.6 210 377-587 29-244 (276)
325 2p1m_B Transport inhibitor res 99.9 4.3E-28 1.5E-32 292.2 -0.5 379 173-581 102-520 (594)
326 2z62_A TOLL-like receptor 4, v 99.9 4.2E-25 1.4E-29 238.3 17.4 223 331-559 12-240 (276)
327 1p9a_G Platelet glycoprotein I 99.9 8.6E-25 2.9E-29 236.9 16.8 206 372-583 6-211 (290)
328 2o6q_A Variable lymphocyte rec 99.9 3.6E-24 1.2E-28 230.0 18.6 184 401-584 38-222 (270)
329 3rfs_A Internalin B, repeat mo 99.9 1.6E-24 5.6E-29 232.9 15.8 185 372-565 59-244 (272)
330 1p9a_G Platelet glycoprotein I 99.9 4.3E-24 1.5E-28 231.4 17.4 208 395-607 5-212 (290)
331 3rfs_A Internalin B, repeat mo 99.9 1.7E-24 5.7E-29 232.8 11.6 219 354-585 21-240 (272)
332 3en9_A Glycoprotease, O-sialog 99.9 3.3E-25 1.1E-29 260.4 6.7 186 685-885 339-539 (540)
333 2ast_B S-phase kinase-associat 99.9 1.9E-25 6.6E-30 248.5 3.3 268 58-374 35-315 (336)
334 3m19_A Variable lymphocyte rec 99.9 1.1E-23 3.7E-28 223.6 16.6 191 58-287 3-193 (251)
335 3goz_A Leucine-rich repeat-con 99.9 1.7E-24 5.8E-29 243.1 8.2 265 254-539 3-304 (362)
336 2ca6_A RAN GTPase-activating p 99.9 3.9E-25 1.3E-29 250.9 1.7 187 373-559 91-319 (386)
337 3goz_A Leucine-rich repeat-con 99.9 1.8E-24 6.3E-29 242.8 6.2 232 353-584 23-301 (362)
338 2xwt_C Thyrotropin receptor; s 99.9 2.2E-23 7.5E-28 219.6 13.7 196 377-577 32-236 (239)
339 2xwt_C Thyrotropin receptor; s 99.9 3.6E-23 1.2E-27 217.9 14.8 186 87-287 25-219 (239)
340 4glp_A Monocyte differentiatio 99.9 7.2E-24 2.5E-28 232.6 9.2 228 97-339 65-307 (310)
341 1h6u_A Internalin H; cell adhe 99.9 8.1E-23 2.8E-27 223.7 15.5 197 92-313 37-233 (308)
342 2ca6_A RAN GTPase-activating p 99.9 2E-24 7E-29 245.0 2.9 265 264-550 23-337 (386)
343 4glp_A Monocyte differentiatio 99.9 4.3E-23 1.5E-27 226.4 13.2 202 353-580 92-307 (310)
344 3cvr_A Invasion plasmid antige 99.9 3.4E-23 1.2E-27 242.9 11.8 209 51-298 34-255 (571)
345 1h6u_A Internalin H; cell adhe 99.9 1.4E-22 4.9E-27 221.7 15.0 190 352-556 41-230 (308)
346 3m19_A Variable lymphocyte rec 99.9 3.3E-22 1.1E-26 212.2 16.9 181 402-585 16-197 (251)
347 2ast_B S-phase kinase-associat 99.9 1.5E-23 5.1E-28 233.2 6.3 229 352-585 70-311 (336)
348 2o6s_A Variable lymphocyte rec 99.9 2.1E-22 7.1E-27 207.2 13.7 183 59-272 6-188 (208)
349 4ay9_X Follicle-stimulating ho 99.9 6.8E-22 2.3E-26 220.7 16.7 243 60-336 9-256 (350)
350 4ay9_X Follicle-stimulating ho 99.9 6.9E-22 2.4E-26 220.6 15.7 179 372-577 75-256 (350)
351 1zar_A RIO2 kinase; serine kin 99.9 5.7E-22 2E-26 213.2 9.1 150 677-857 85-252 (282)
352 3cvr_A Invasion plasmid antige 99.8 4.1E-21 1.4E-25 225.3 13.8 169 376-568 80-255 (571)
353 2v70_A SLIT-2, SLIT homolog 2 99.8 5.5E-21 1.9E-25 198.0 9.5 156 427-585 14-171 (220)
354 3e6j_A Variable lymphocyte rec 99.8 3.4E-20 1.2E-24 193.4 15.2 163 52-238 11-173 (229)
355 2o6s_A Variable lymphocyte rec 99.8 4.1E-20 1.4E-24 190.0 15.2 141 421-568 49-190 (208)
356 4b8c_D Glucose-repressible alc 99.8 9.3E-22 3.2E-26 239.7 1.6 267 26-340 129-405 (727)
357 2v9t_B SLIT homolog 2 protein 99.8 1.6E-20 5.4E-25 194.5 9.5 155 427-584 14-169 (220)
358 1h6t_A Internalin B; cell adhe 99.8 1.1E-19 3.9E-24 196.8 13.8 172 93-287 43-214 (291)
359 1m9s_A Internalin B; cell inva 99.8 2.5E-19 8.7E-24 212.6 16.9 174 92-312 39-212 (605)
360 1dce_A Protein (RAB geranylger 99.8 5.1E-22 1.8E-26 234.4 -6.2 190 93-314 346-550 (567)
361 1h6t_A Internalin B; cell adhe 99.8 1.7E-19 5.9E-24 195.4 13.8 171 374-557 44-214 (291)
362 2xot_A Amphoterin-induced prot 99.8 1E-19 3.6E-24 203.8 11.6 177 404-583 22-205 (361)
363 2v9t_B SLIT homolog 2 protein 99.8 3.5E-19 1.2E-23 184.3 13.7 147 79-237 18-165 (220)
364 1m9s_A Internalin B; cell inva 99.8 1.8E-19 6.1E-24 213.9 12.6 182 373-567 40-221 (605)
365 3e6j_A Variable lymphocyte rec 99.8 8.7E-19 3E-23 182.7 14.5 154 427-584 22-176 (229)
366 2xot_A Amphoterin-induced prot 99.8 5E-19 1.7E-23 198.3 13.2 127 76-213 22-149 (361)
367 1w8a_A SLIT protein; signaling 99.8 1.5E-19 5.2E-24 182.9 7.4 155 451-607 11-166 (192)
368 2v70_A SLIT-2, SLIT homolog 2 99.8 1.1E-18 3.6E-23 180.8 13.2 153 404-559 15-169 (220)
369 1dce_A Protein (RAB geranylger 99.8 2.6E-21 9E-26 228.3 -7.5 199 353-584 350-550 (567)
370 4ezg_A Putative uncharacterize 99.8 1.4E-18 4.9E-23 176.6 11.7 154 421-581 41-195 (197)
371 1xeu_A Internalin C; cellular 99.8 6.6E-19 2.2E-23 187.7 8.9 170 375-558 18-187 (263)
372 4b8c_D Glucose-repressible alc 99.8 6.1E-19 2.1E-23 214.8 9.0 143 392-537 216-359 (727)
373 1xeu_A Internalin C; cellular 99.8 1.2E-18 4.1E-23 185.7 9.9 167 354-534 21-187 (263)
374 1w8a_A SLIT protein; signaling 99.7 2.9E-18 9.8E-23 173.4 11.2 176 427-608 11-188 (192)
375 4ezg_A Putative uncharacterize 99.7 3.5E-18 1.2E-22 173.7 11.4 65 171-235 83-147 (197)
376 1zth_A RIO1 serine protein kin 99.7 2.7E-18 9.2E-23 182.4 8.1 137 684-832 49-219 (258)
377 2wfh_A SLIT homolog 2 protein 99.7 6.9E-18 2.4E-22 170.6 7.7 131 451-584 13-143 (193)
378 3sb4_A Hypothetical leucine ri 99.7 1.7E-17 5.9E-22 183.3 10.2 100 423-524 225-326 (329)
379 3sb4_A Hypothetical leucine ri 99.7 7.2E-18 2.5E-22 186.4 6.7 102 325-430 225-327 (329)
380 2o6r_A Variable lymphocyte rec 99.7 1.5E-16 5E-21 158.7 11.1 134 450-585 9-142 (177)
381 2ell_A Acidic leucine-rich nuc 99.7 1.9E-16 6.6E-21 156.4 10.9 132 424-556 24-160 (168)
382 2ell_A Acidic leucine-rich nuc 99.7 1.5E-16 5.3E-21 157.1 9.6 131 96-236 24-159 (168)
383 2wfh_A SLIT homolog 2 protein 99.6 7.5E-16 2.6E-20 155.6 11.9 128 427-557 13-140 (193)
384 2je0_A Acidic leucine-rich nuc 99.6 1.9E-16 6.4E-21 153.0 7.0 126 96-231 17-147 (149)
385 2o6r_A Variable lymphocyte rec 99.6 1.1E-15 3.7E-20 152.3 12.2 134 60-216 7-140 (177)
386 2je0_A Acidic leucine-rich nuc 99.6 4.1E-16 1.4E-20 150.6 8.5 127 424-551 17-148 (149)
387 4fdw_A Leucine rich hypothetic 99.6 6E-15 2.1E-19 166.3 18.5 245 322-580 132-383 (401)
388 4gyi_A RIO2 kinase; protein ki 99.6 3E-16 1E-20 172.3 6.8 137 682-832 95-265 (397)
389 4fdw_A Leucine rich hypothetic 99.6 1.5E-14 5E-19 163.2 18.2 242 274-556 136-383 (401)
390 1ds9_A Outer arm dynein; leuci 99.6 4.4E-17 1.5E-21 165.7 -3.2 155 396-580 14-185 (198)
391 1ds9_A Outer arm dynein; leuci 99.6 3.2E-17 1.1E-21 166.7 -4.5 144 420-585 14-158 (198)
392 1a9n_A U2A', U2A'; complex (nu 99.6 2.1E-15 7.1E-20 150.1 7.0 129 447-580 18-153 (176)
393 4fs7_A Uncharacterized protein 99.5 1.1E-13 3.8E-18 156.7 20.6 80 489-572 314-393 (394)
394 1a9n_A U2A', U2A'; complex (nu 99.5 8.4E-15 2.9E-19 145.7 8.7 133 420-557 15-154 (176)
395 4fs7_A Uncharacterized protein 99.5 3.6E-13 1.2E-17 152.6 19.8 197 371-577 180-376 (394)
396 3g39_A Variable lymphocyte rec 99.5 2.9E-14 1E-18 140.7 9.4 90 495-584 30-119 (170)
397 3g39_A Variable lymphocyte rec 99.5 5.7E-14 1.9E-18 138.6 9.6 108 450-559 11-118 (170)
398 2r9u_A Variable lymphocyte rec 99.5 6.8E-14 2.3E-18 138.5 9.5 90 495-584 33-122 (174)
399 2r9u_A Variable lymphocyte rec 99.5 7.7E-14 2.6E-18 138.1 8.6 106 451-558 15-120 (174)
400 2ifg_A High affinity nerve gro 99.3 9E-13 3.1E-17 146.6 8.5 102 453-556 13-116 (347)
401 3un9_A NLR family member X1; l 99.3 6.1E-14 2.1E-18 156.5 -1.7 61 424-484 126-196 (372)
402 3un9_A NLR family member X1; l 99.3 5.9E-14 2E-18 156.7 -2.6 17 323-339 180-196 (372)
403 4gt6_A Cell surface protein; l 99.3 6.8E-11 2.3E-15 133.7 22.2 332 193-580 56-391 (394)
404 4gt6_A Cell surface protein; l 99.3 9.7E-11 3.3E-15 132.5 21.3 115 132-258 51-169 (394)
405 2ifg_A High affinity nerve gro 99.3 4.5E-12 1.5E-16 141.0 8.4 131 474-608 11-146 (347)
406 3tm0_A Aminoglycoside 3'-phosp 99.2 2.4E-11 8.3E-16 129.2 10.7 146 679-831 11-213 (263)
407 1nd4_A Aminoglycoside 3'-phosp 99.1 1.1E-10 3.9E-15 123.8 10.0 129 691-831 29-214 (264)
408 4h09_A Hypothetical leucine ri 99.0 1.2E-08 4.1E-13 114.6 21.8 76 489-566 280-355 (379)
409 4h09_A Hypothetical leucine ri 99.0 1.6E-08 5.5E-13 113.6 21.8 154 419-577 189-343 (379)
410 2ra8_A Uncharacterized protein 99.0 1.1E-10 3.8E-15 128.9 2.9 216 71-337 106-341 (362)
411 3dxp_A Putative acyl-COA dehyd 98.9 2.2E-09 7.4E-14 119.7 11.5 142 686-831 42-248 (359)
412 3rw6_A Nuclear RNA export fact 98.9 1.1E-11 3.8E-16 129.7 -7.1 146 59-214 77-234 (267)
413 2ra8_A Uncharacterized protein 98.9 3.7E-10 1.3E-14 124.8 4.6 84 493-578 250-341 (362)
414 3sg8_A APH(2'')-ID; antibiotic 98.8 4.9E-09 1.7E-13 113.9 8.0 184 687-885 25-288 (304)
415 1io0_A Tropomodulin; LRR prote 98.7 6.7E-10 2.3E-14 110.8 -2.2 123 87-213 27-164 (185)
416 3r70_A Aminoglycoside phosphot 98.5 2.4E-07 8.1E-12 101.2 11.0 136 683-831 38-237 (320)
417 1io0_A Tropomodulin; LRR prote 98.5 1.1E-08 3.8E-13 101.9 0.2 124 114-262 30-164 (185)
418 3d1u_A Putative fructosamine-3 98.4 1.1E-06 3.7E-11 94.0 13.1 77 686-766 19-98 (288)
419 3rw6_A Nuclear RNA export fact 98.4 9.3E-08 3.2E-12 99.9 2.3 68 197-265 167-236 (267)
420 3tdw_A Gentamicin resistance p 98.3 2.8E-06 9.7E-11 91.9 11.7 136 687-831 24-224 (306)
421 3ats_A Putative uncharacterize 98.2 3.1E-06 1E-10 94.0 10.6 144 688-831 26-252 (357)
422 4gkh_A Aminoglycoside 3'-phosp 98.2 3.5E-06 1.2E-10 89.4 10.3 136 688-831 30-223 (272)
423 3ovc_A Hygromycin-B 4-O-kinase 98.2 6.1E-06 2.1E-10 91.3 12.0 76 685-766 44-122 (362)
424 1pgv_A TMD-1, tropomodulin TMD 97.9 1E-06 3.5E-11 86.9 -1.5 121 88-212 33-169 (197)
425 3f7w_A Putative fructosamine-3 97.8 6.1E-05 2.1E-09 80.5 11.0 79 683-765 16-97 (288)
426 2olc_A MTR kinase, methylthior 97.8 3.8E-05 1.3E-09 86.4 9.6 75 687-763 35-120 (397)
427 2q83_A YTAA protein; 2635576, 97.7 4.4E-05 1.5E-09 83.9 7.9 138 688-830 38-251 (346)
428 3e4g_A ATP synthase subunit S, 97.7 2.4E-05 8.2E-10 75.6 4.5 82 353-434 62-149 (176)
429 3jr1_A Putative fructosamine-3 97.6 0.00026 8.7E-09 76.1 11.9 137 686-827 40-232 (312)
430 3e4g_A ATP synthase subunit S, 97.6 2.6E-05 8.8E-10 75.4 3.6 93 369-461 54-153 (176)
431 1pgv_A TMD-1, tropomodulin TMD 97.5 2.5E-05 8.5E-10 77.0 1.8 71 140-214 37-112 (197)
432 2ppq_A HSK, HK, homoserine kin 97.3 0.00068 2.3E-08 73.6 10.1 156 672-830 7-216 (322)
433 3dxq_A Choline/ethanolamine ki 97.3 0.00084 2.9E-08 72.1 10.7 131 684-831 20-202 (301)
434 3feg_A Choline/ethanolamine ki 97.1 0.0013 4.4E-08 72.6 9.5 140 687-831 55-254 (379)
435 2pyw_A Uncharacterized protein 97.0 0.0012 4E-08 74.7 8.9 79 800-881 231-313 (420)
436 3csv_A Aminoglycoside phosphot 97.0 0.0018 6.1E-08 70.6 9.6 139 688-831 24-217 (333)
437 1nw1_A Choline kinase (49.2 KD 97.0 0.0018 6.1E-08 73.2 9.7 73 687-765 78-159 (429)
438 2qg7_A Ethanolamine kinase PV0 96.9 0.0032 1.1E-07 71.4 11.2 75 687-766 113-189 (458)
439 3rfe_A Platelet glycoprotein I 96.9 0.0008 2.7E-08 61.9 4.9 58 523-582 12-70 (130)
440 1zyl_A Hypothetical protein YI 96.8 0.0052 1.8E-07 66.7 11.7 140 688-831 32-223 (328)
441 3c5i_A Choline kinase; choline 96.8 0.0022 7.5E-08 71.0 8.6 73 688-765 39-121 (369)
442 3f2s_A CK, chetk-alpha, cholin 96.3 0.013 4.5E-07 64.7 10.5 140 688-831 58-280 (401)
443 3i1a_A Spectinomycin phosphotr 96.3 0.015 5.3E-07 63.2 10.8 67 692-765 33-108 (339)
444 3rfe_A Platelet glycoprotein I 96.2 0.0059 2E-07 56.0 5.8 37 496-532 32-68 (130)
445 2yle_A Protein spire homolog 1 96.1 0.011 3.8E-07 58.3 7.8 102 764-883 34-135 (229)
446 3mes_A Choline kinase; malaria 95.8 0.025 8.7E-07 63.2 9.7 74 687-765 75-157 (424)
447 3g15_A CK, chetk-alpha, cholin 93.6 0.099 3.4E-06 58.2 7.3 30 802-831 245-280 (401)
448 2ks1_B Epidermal growth factor 85.3 1 3.6E-05 31.6 4.0 25 627-651 13-37 (44)
449 4ann_A ESSB; membrane protein, 80.4 4.3 0.00015 40.0 7.9 125 736-894 43-167 (215)
450 2l2t_A Receptor tyrosine-prote 77.9 2.8 9.4E-05 29.5 4.0 17 635-651 20-36 (44)
451 2jwa_A Receptor tyrosine-prote 76.1 3 0.0001 29.2 3.7 7 628-634 14-20 (44)
452 3cxl_A N-chimerin; SH2, RHO-GA 71.2 0.4 1.4E-05 54.3 -2.7 59 686-747 146-213 (463)
453 2k1k_A Ephrin type-A receptor 70.7 2.7 9.3E-05 28.6 2.4 26 627-652 12-37 (38)
454 4ano_A ESSB; membrane protein, 63.1 15 0.00051 36.3 7.1 117 736-887 48-165 (219)
455 2lz0_A Uncharacterized protein 31.3 78 0.0027 26.6 5.6 45 212-258 8-52 (100)
456 2lz0_A Uncharacterized protein 28.0 82 0.0028 26.5 5.2 13 562-574 38-50 (100)
457 3ox7_P MH027; urokinase-type p 24.3 22 0.00074 20.0 0.5 10 57-66 5-14 (23)
No 1
>3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A*
Probab=100.00 E-value=1.9e-79 Score=759.44 Aligned_cols=584 Identities=32% Similarity=0.494 Sum_probs=446.4
Q ss_pred CCChhHHHHHHHHHHhcccCCCCccccccCCCCCCCccceeEeeCCCCcEEEEEecCCCcccc---CC------------
Q 002021 25 SSTITDQDALLALKAHITHDPTNFLAKNWNTSTPVCNWTGVACEVHSQRVTVLNISSLNLTGT---IP------------ 89 (979)
Q Consensus 25 ~~~~~~~~all~~k~~~~~~~~~~~~~~w~~~~~~c~w~gv~c~~~~~~v~~l~l~~~~l~g~---~~------------ 89 (979)
.+..+|++||++||+++. ||. .+ ++|+.+++||+|.||+|+ +++|+.|||++++++|. +|
T Consensus 8 ~~~~~~~~all~~k~~~~-~~~-~l-~~W~~~~~~C~w~gv~C~--~~~v~~L~L~~~~l~g~~~~l~~~l~~L~~L~~l 82 (768)
T 3rgz_A 8 QSLYREIHQLISFKDVLP-DKN-LL-PDWSSNKNPCTFDGVTCR--DDKVTSIDLSSKPLNVGFSAVSSSLLSLTGLESL 82 (768)
T ss_dssp CCHHHHHHHHHHHHTTCS-CTT-SS-TTCCTTSCGGGSTTEEEE--TTEEEEEECTTSCCCEEHHHHHHHTTTCTTCCEE
T ss_pred cCCHHHHHHHHHHHhhCC-Ccc-cc-cCCCCCCCCcCCcceEEC--CCcEEEEECCCCCcCCccCccChhHhccCccccc
Confidence 446789999999999996 887 66 699888899999999998 68999999999999987 43
Q ss_pred -----------CCCcCCCCCCeeeccCCcccccCCc--cccccCcccEEecccccccccCCccc-cCCCCCcEEEccCCc
Q 002021 90 -----------SQLGNLSSLQSLNLSFNRLFGSIPS--AIFTTYTLKYVCLRGNQLSGTFPSFI-SNKSSLQHLDLSSNA 155 (979)
Q Consensus 90 -----------~~l~~l~~L~~L~L~~n~~~~~~p~--~~~~l~~L~~L~L~~n~l~~~~p~~l-~~l~~L~~L~Ls~N~ 155 (979)
+.++.+++|++|||++|+++|.+|. .++.+++|++|+|++|.+++.+|..+ .++++|++|||++|.
T Consensus 83 ~~~~~~~~~l~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~~l~~L~~L~Ls~n~ 162 (768)
T 3rgz_A 83 FLSNSHINGSVSGFKCSASLTSLDLSRNSLSGPVTTLTSLGSCSGLKFLNVSSNTLDFPGKVSGGLKLNSLEVLDLSANS 162 (768)
T ss_dssp ECTTSCEEECCCCCCCCTTCCEEECCSSEEEEEGGGGGGGGGCTTCCEEECCSSEEECCSSCCSCCCCTTCSEEECCSSC
T ss_pred CCcCCCcCCCchhhccCCCCCEEECCCCcCCCcCCChHHHhCCCCCCEEECcCCccCCcCCHHHhccCCCCCEEECCCCc
Confidence 5788899999999999999999998 99999999999999999998888775 788888888888888
Q ss_pred cCchhhhhh--hccC---------------CcccCCCCccceeecccccccccccccccCCCCCCceecCCCeeeecCCc
Q 002021 156 LSGEIRANI--CREI---------------PREFGNLPELELMSLAANNLQGKIPLKIGNLRNLEKLDIGDNKLVGIAPI 218 (979)
Q Consensus 156 l~~~~~~~~--~~~i---------------p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~ 218 (979)
+++..+... ...+ ...++.+++|++|+|++|++++.+|. ++++++|++|+|++|++++..|.
T Consensus 163 l~~~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~l~~L~~L~Ls~n~l~~~~~~-l~~l~~L~~L~Ls~n~l~~~~~~ 241 (768)
T 3rgz_A 163 ISGANVVGWVLSDGCGELKHLAISGNKISGDVDVSRCVNLEFLDVSSNNFSTGIPF-LGDCSALQHLDISGNKLSGDFSR 241 (768)
T ss_dssp CEEETHHHHHHTTCCTTCCEEECCSSEEESCCBCTTCTTCCEEECCSSCCCSCCCB-CTTCCSCCEEECCSSCCCSCHHH
T ss_pred cCCcCChhhhhhccCCCCCEEECCCCcccccCCcccCCcCCEEECcCCcCCCCCcc-cccCCCCCEEECcCCcCCCcccH
Confidence 876533210 0000 01125566666666666666665655 66677777777777777666666
Q ss_pred cccccCccceeeccCCCCcCCCcc----------------------cccCCCCCcCEEEccCCccccccCcccccCCCCc
Q 002021 219 AIFNVSTLKILGLQDNSLSGCLSS----------------------IGYARLPNLEILSLWGNNFSGTIPRFIFNASKLS 276 (979)
Q Consensus 219 ~l~~l~~L~~L~L~~N~l~~~~~~----------------------~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~ 276 (979)
.+.++++|+.|+|++|++++..+. ..+..+++|++|+|++|++++.+|..+.++++|+
T Consensus 242 ~l~~l~~L~~L~Ls~n~l~~~~~~~~l~~L~~L~L~~n~l~~~ip~~~~~~~~~L~~L~Ls~n~l~~~~p~~~~~l~~L~ 321 (768)
T 3rgz_A 242 AISTCTELKLLNISSNQFVGPIPPLPLKSLQYLSLAENKFTGEIPDFLSGACDTLTGLDLSGNHFYGAVPPFFGSCSLLE 321 (768)
T ss_dssp HTTTCSSCCEEECCSSCCEESCCCCCCTTCCEEECCSSEEEESCCCCSCTTCTTCSEEECCSSEEEECCCGGGGGCTTCC
T ss_pred HHhcCCCCCEEECCCCcccCccCccccCCCCEEECcCCccCCccCHHHHhhcCcCCEEECcCCcCCCccchHHhcCCCcc
Confidence 666666666666666666544332 2122234555555555555555555555555555
Q ss_pred EEeccccccccccCcc-ccccccccceeccccccc-cccchhhhhh-------------------cccC--CCCccEEEc
Q 002021 277 ILDLEGNSFSGFIPNT-FGNLRNLSWLVLSDNYLT-SSTQELSFLS-------------------SLSN--CKFLKYFDL 333 (979)
Q Consensus 277 ~L~Ls~N~l~~~~~~~-~~~l~~L~~L~Ls~N~l~-~~~~~~~~~~-------------------~l~~--l~~L~~L~L 333 (979)
+|+|++|.+++.+|.. |.++++|++|+|++|+++ ..+..+..+. .+.. +++|++|++
T Consensus 322 ~L~L~~n~l~~~ip~~~l~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~~L~~L~Ls~N~l~~~~~~~~~~~~~~~L~~L~L 401 (768)
T 3rgz_A 322 SLALSSNNFSGELPMDTLLKMRGLKVLDLSFNEFSGELPESLTNLSASLLTLDLSSNNFSGPILPNLCQNPKNTLQELYL 401 (768)
T ss_dssp EEECCSSEEEEECCHHHHTTCTTCCEEECCSSEEEECCCTTHHHHTTTCSEEECCSSEEEEECCTTTTCSTTCCCCEEEC
T ss_pred EEECCCCcccCcCCHHHHhcCCCCCEEeCcCCccCccccHHHHhhhcCCcEEEccCCCcCCCcChhhhhcccCCccEEEC
Confidence 5555555554444433 455555555555555544 2222111110 0111 334455555
Q ss_pred cCCCCcccCCccccccccccccEEEccCccccCCCCccccCCCcccEEEecCCCCCchhHHhhhcCCCCcEEEecCcccC
Q 002021 334 SYNPLYRILPRTTVGNLSHSLEEFKMSNCNISGGIPEEISNLTNLRTIYLGGNKLNGSILITLSKLQKLQDLGLKDNKLE 413 (979)
Q Consensus 334 s~N~l~~~~~~~~~~~l~~~L~~L~L~~n~i~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~ 413 (979)
++|++.+..+..+ .. .++|++|++++|++++.+|..++.+++|+.|++++|++.+.+|..+..+++|++|++++|++.
T Consensus 402 ~~n~l~~~~p~~l-~~-l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~ 479 (768)
T 3rgz_A 402 QNNGFTGKIPPTL-SN-CSELVSLHLSFNYLSGTIPSSLGSLSKLRDLKLWLNMLEGEIPQELMYVKTLETLILDFNDLT 479 (768)
T ss_dssp CSSEEEEECCGGG-GG-CTTCCEEECCSSEEESCCCGGGGGCTTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSCCC
T ss_pred CCCccccccCHHH-hc-CCCCCEEECcCCcccCcccHHHhcCCCCCEEECCCCcccCcCCHHHcCCCCceEEEecCCccc
Confidence 5554444333322 11 246888888888888888888888888888888888888888888888888999999999998
Q ss_pred CCccccccCCCCCceEecCCCcccccCCccccCCCcCceEecCCCccc-cccccccCcCCCcEEEeccccccCCCcccc-
Q 002021 414 GSIPYDICNLAELYRLDLDGNKLSGSIPACFSNLTSLRIVSLGSNELT-SIPLTFWNLKDILNLNFSSNFLTGSLPLEI- 491 (979)
Q Consensus 414 ~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~-~lp~~~~~l~~L~~L~ls~N~l~~~~p~~~- 491 (979)
+.+|..+.++++|++|+|++|++++.+|..++.+++|++|+|++|+++ .+|..+..+++|+.|++++|+++|.+|..+
T Consensus 480 ~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~g~ip~~~~ 559 (768)
T 3rgz_A 480 GEIPSGLSNCTNLNWISLSNNRLTGEIPKWIGRLENLAILKLSNNSFSGNIPAELGDCRSLIWLDLNTNLFNGTIPAAMF 559 (768)
T ss_dssp SCCCGGGGGCTTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSCCEEECCGGGGGCTTCCEEECCSSEEESBCCGGGG
T ss_pred CcCCHHHhcCCCCCEEEccCCccCCcCChHHhcCCCCCEEECCCCcccCcCCHHHcCCCCCCEEECCCCccCCcCChHHh
Confidence 888888999999999999999999889999999999999999999998 788889999999999999999987777543
Q ss_pred ---------------------------------------------------------------------ccccccceEec
Q 002021 492 ---------------------------------------------------------------------GSLKVLVGIDL 502 (979)
Q Consensus 492 ---------------------------------------------------------------------~~l~~L~~L~L 502 (979)
+.+++|+.|||
T Consensus 560 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~g~~~~~~~~l~~L~~LdL 639 (768)
T 3rgz_A 560 KQSGKIAANFIAGKRYVYIKNDGMKKECHGAGNLLEFQGIRSEQLNRLSTRNPCNITSRVYGGHTSPTFDNNGSMMFLDM 639 (768)
T ss_dssp TTTTCBCCSTTCSCEEEEEECCSCCTTCCSSEEEEECTTCCGGGGGGGGGTCCSCTTSCEEEEECCCSCSSSBCCCEEEC
T ss_pred cccchhhhhccccccccccccccccccccccccccccccccchhhhccccccccccccceecccCchhhhccccccEEEC
Confidence 33567899999
Q ss_pred cCCccCcccchhhcCCcccceeecCCccccCCCCCcccccccccccccccccccccCCccccCccccCeEeccCCccccc
Q 002021 503 SRNNFSGVIPTEIGGLKNLEYLFLGYNRLQGSIPNSFGDLISLKFLNLSNNNLSGVIPASLEKLSYLEDLNLSFNQLEGK 582 (979)
Q Consensus 503 s~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~ 582 (979)
++|+++|.+|..|+++++|+.|+|++|+++|.+|..|+++++|+.|||++|+++|.+|..+..+++|+.|+|++|+++|.
T Consensus 640 s~N~l~g~ip~~l~~l~~L~~L~Ls~N~l~g~ip~~l~~L~~L~~LdLs~N~l~g~ip~~l~~l~~L~~L~ls~N~l~g~ 719 (768)
T 3rgz_A 640 SYNMLSGYIPKEIGSMPYLFILNLGHNDISGSIPDEVGDLRGLNILDLSSNKLDGRIPQAMSALTMLTEIDLSNNNLSGP 719 (768)
T ss_dssp CSSCCBSCCCGGGGGCTTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSCCEECCCGGGGGCCCCSEEECCSSEEEEE
T ss_pred cCCcccccCCHHHhccccCCEEeCcCCccCCCCChHHhCCCCCCEEECCCCcccCcCChHHhCCCCCCEEECcCCccccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCCcccccccCCccccCCCCCCCCCCCCccc
Q 002021 583 IPRGGSFGNFSAQSFEGNELLCGSPNLQIPPCKTSIH 619 (979)
Q Consensus 583 ~p~~~~~~~~~~~~~~~N~~~c~~p~~~~~~~~~~~~ 619 (979)
||.++.|.++...+|.||+++||.| +++|.....
T Consensus 720 iP~~~~~~~~~~~~~~gN~~Lcg~~---l~~C~~~~~ 753 (768)
T 3rgz_A 720 IPEMGQFETFPPAKFLNNPGLCGYP---LPRCDPSNA 753 (768)
T ss_dssp CCSSSSGGGSCGGGGCSCTEEESTT---SCCCCSCC-
T ss_pred CCCchhhccCCHHHhcCCchhcCCC---CcCCCCCcc
Confidence 9999999999999999999999998 568976443
No 2
>3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A*
Probab=100.00 E-value=4.6e-61 Score=594.86 Aligned_cols=488 Identities=34% Similarity=0.477 Sum_probs=425.2
Q ss_pred cEEEEEecCCCccccCCCCCcCCCCCCeeeccCCcccccCCccccccCcccEEecccccccccCCccccCCCCCcEEEcc
Q 002021 73 RVTVLNISSLNLTGTIPSQLGNLSSLQSLNLSFNRLFGSIPSAIFTTYTLKYVCLRGNQLSGTFPSFISNKSSLQHLDLS 152 (979)
Q Consensus 73 ~v~~l~l~~~~l~g~~~~~l~~l~~L~~L~L~~n~~~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls 152 (979)
+++.|++++|.++|.+|. +.+++|++|+|++|++++.+|. ++.+++|++|+|++|++++.+|..++++++|++|+|+
T Consensus 179 ~L~~L~Ls~n~l~~~~~~--~~l~~L~~L~Ls~n~l~~~~~~-l~~l~~L~~L~Ls~n~l~~~~~~~l~~l~~L~~L~Ls 255 (768)
T 3rgz_A 179 ELKHLAISGNKISGDVDV--SRCVNLEFLDVSSNNFSTGIPF-LGDCSALQHLDISGNKLSGDFSRAISTCTELKLLNIS 255 (768)
T ss_dssp TCCEEECCSSEEESCCBC--TTCTTCCEEECCSSCCCSCCCB-CTTCCSCCEEECCSSCCCSCHHHHTTTCSSCCEEECC
T ss_pred CCCEEECCCCcccccCCc--ccCCcCCEEECcCCcCCCCCcc-cccCCCCCEEECcCCcCCCcccHHHhcCCCCCEEECC
Confidence 455555555555554432 6777888888888888877776 8888888888888888888888888888888888888
Q ss_pred CCccCchhhhhhhccCCcccCCCCccceeecccccccccccccccCC-CCCCceecCCCeeeecCCccccccCccceeec
Q 002021 153 SNALSGEIRANICREIPREFGNLPELELMSLAANNLQGKIPLKIGNL-RNLEKLDIGDNKLVGIAPIAIFNVSTLKILGL 231 (979)
Q Consensus 153 ~N~l~~~~~~~~~~~ip~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l-~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L 231 (979)
+|.+++. +|.. .+++|++|+|++|++++.+|..+..+ ++|++|+|++|++++..|..|.++++|+.|+|
T Consensus 256 ~n~l~~~--------~~~~--~l~~L~~L~L~~n~l~~~ip~~~~~~~~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L 325 (768)
T 3rgz_A 256 SNQFVGP--------IPPL--PLKSLQYLSLAENKFTGEIPDFLSGACDTLTGLDLSGNHFYGAVPPFFGSCSLLESLAL 325 (768)
T ss_dssp SSCCEES--------CCCC--CCTTCCEEECCSSEEEESCCCCSCTTCTTCSEEECCSSEEEECCCGGGGGCTTCCEEEC
T ss_pred CCcccCc--------cCcc--ccCCCCEEECcCCccCCccCHHHHhhcCcCCEEECcCCcCCCccchHHhcCCCccEEEC
Confidence 8888764 4443 78889999999999988889888775 99999999999999999999999999999999
Q ss_pred cCCCCcCCCcccccCCCCCcCEEEccCCccccccCcccccCC-CCcEEeccccccccccCccccc--cccccceeccccc
Q 002021 232 QDNSLSGCLSSIGYARLPNLEILSLWGNNFSGTIPRFIFNAS-KLSILDLEGNSFSGFIPNTFGN--LRNLSWLVLSDNY 308 (979)
Q Consensus 232 ~~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~-~L~~L~Ls~N~l~~~~~~~~~~--l~~L~~L~Ls~N~ 308 (979)
++|++++..+...+..+++|++|+|++|++++.+|..+.+++ +|++|++++|++++.+|..+.. +++|++|++++|.
T Consensus 326 ~~n~l~~~ip~~~l~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~~L~~L~Ls~N~l~~~~~~~~~~~~~~~L~~L~L~~n~ 405 (768)
T 3rgz_A 326 SSNNFSGELPMDTLLKMRGLKVLDLSFNEFSGELPESLTNLSASLLTLDLSSNNFSGPILPNLCQNPKNTLQELYLQNNG 405 (768)
T ss_dssp CSSEEEEECCHHHHTTCTTCCEEECCSSEEEECCCTTHHHHTTTCSEEECCSSEEEEECCTTTTCSTTCCCCEEECCSSE
T ss_pred CCCcccCcCCHHHHhcCCCCCEEeCcCCccCccccHHHHhhhcCCcEEEccCCCcCCCcChhhhhcccCCccEEECCCCc
Confidence 999998766665688999999999999999999999998887 8999999999999888888877 8899999999999
Q ss_pred cccccchhhhhhcccCCCCccEEEccCCCCcccCCccccccccccccEEEccCccccCCCCccccCCCcccEEEecCCCC
Q 002021 309 LTSSTQELSFLSSLSNCKFLKYFDLSYNPLYRILPRTTVGNLSHSLEEFKMSNCNISGGIPEEISNLTNLRTIYLGGNKL 388 (979)
Q Consensus 309 l~~~~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~~L~~L~L~~n~i~~~~p~~l~~l~~L~~L~L~~N~l 388 (979)
+++..+. .+.++++|++|++++|++.+..+..+. . .++|+.|++++|.+++.+|..+..+++|++|++++|++
T Consensus 406 l~~~~p~-----~l~~l~~L~~L~Ls~N~l~~~~p~~l~-~-l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l 478 (768)
T 3rgz_A 406 FTGKIPP-----TLSNCSELVSLHLSFNYLSGTIPSSLG-S-LSKLRDLKLWLNMLEGEIPQELMYVKTLETLILDFNDL 478 (768)
T ss_dssp EEEECCG-----GGGGCTTCCEEECCSSEEESCCCGGGG-G-CTTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSCC
T ss_pred cccccCH-----HHhcCCCCCEEECcCCcccCcccHHHh-c-CCCCCEEECCCCcccCcCCHHHcCCCCceEEEecCCcc
Confidence 9854332 478899999999999999877665543 3 35899999999999999999999999999999999999
Q ss_pred CchhHHhhhcCCCCcEEEecCcccCCCccccccCCCCCceEecCCCcccccCCccccCCCcCceEecCCCccc-cccccc
Q 002021 389 NGSILITLSKLQKLQDLGLKDNKLEGSIPYDICNLAELYRLDLDGNKLSGSIPACFSNLTSLRIVSLGSNELT-SIPLTF 467 (979)
Q Consensus 389 ~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~-~lp~~~ 467 (979)
++.+|..+.++++|++|++++|++.+.+|.+++.+++|++|+|++|++++.+|..++++++|++|++++|+++ .+|..+
T Consensus 479 ~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~g~ip~~~ 558 (768)
T 3rgz_A 479 TGEIPSGLSNCTNLNWISLSNNRLTGEIPKWIGRLENLAILKLSNNSFSGNIPAELGDCRSLIWLDLNTNLFNGTIPAAM 558 (768)
T ss_dssp CSCCCGGGGGCTTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSCCEEECCGGGGGCTTCCEEECCSSEEESBCCGGG
T ss_pred cCcCCHHHhcCCCCCEEEccCCccCCcCChHHhcCCCCCEEECCCCcccCcCCHHHcCCCCCCEEECCCCccCCcCChHH
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999987 666543
Q ss_pred ----------------------------------------------------------------------cCcCCCcEEE
Q 002021 468 ----------------------------------------------------------------------WNLKDILNLN 477 (979)
Q Consensus 468 ----------------------------------------------------------------------~~l~~L~~L~ 477 (979)
..+++|+.|+
T Consensus 559 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~g~~~~~~~~l~~L~~Ld 638 (768)
T 3rgz_A 559 FKQSGKIAANFIAGKRYVYIKNDGMKKECHGAGNLLEFQGIRSEQLNRLSTRNPCNITSRVYGGHTSPTFDNNGSMMFLD 638 (768)
T ss_dssp GTTTTCBCCSTTCSCEEEEEECCSCCTTCCSSEEEEECTTCCGGGGGGGGGTCCSCTTSCEEEEECCCSCSSSBCCCEEE
T ss_pred hcccchhhhhccccccccccccccccccccccccccccccccchhhhccccccccccccceecccCchhhhccccccEEE
Confidence 3357789999
Q ss_pred eccccccCCCccccccccccceEeccCCccCcccchhhcCCcccceeecCCccccCCCCCcccccccccccccccccccc
Q 002021 478 FSSNFLTGSLPLEIGSLKVLVGIDLSRNNFSGVIPTEIGGLKNLEYLFLGYNRLQGSIPNSFGDLISLKFLNLSNNNLSG 557 (979)
Q Consensus 478 ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~ 557 (979)
|++|+++|.+|..++.++.|+.|+|++|+++|.+|..|+++++|+.|||++|+++|.+|..+.++++|++|||++|+++|
T Consensus 639 Ls~N~l~g~ip~~l~~l~~L~~L~Ls~N~l~g~ip~~l~~L~~L~~LdLs~N~l~g~ip~~l~~l~~L~~L~ls~N~l~g 718 (768)
T 3rgz_A 639 MSYNMLSGYIPKEIGSMPYLFILNLGHNDISGSIPDEVGDLRGLNILDLSSNKLDGRIPQAMSALTMLTEIDLSNNNLSG 718 (768)
T ss_dssp CCSSCCBSCCCGGGGGCTTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSCCEECCCGGGGGCCCCSEEECCSSEEEE
T ss_pred CcCCcccccCCHHHhccccCCEEeCcCCccCCCCChHHhCCCCCCEEECCCCcccCcCChHHhCCCCCCEEECcCCcccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCccccCccccCeEeccCCc-ccc
Q 002021 558 VIPASLEKLSYLEDLNLSFNQ-LEG 581 (979)
Q Consensus 558 ~~p~~~~~l~~L~~L~L~~N~-l~~ 581 (979)
.+|.. ..+..+....+.+|+ +.|
T Consensus 719 ~iP~~-~~~~~~~~~~~~gN~~Lcg 742 (768)
T 3rgz_A 719 PIPEM-GQFETFPPAKFLNNPGLCG 742 (768)
T ss_dssp ECCSS-SSGGGSCGGGGCSCTEEES
T ss_pred cCCCc-hhhccCCHHHhcCCchhcC
Confidence 99965 456667777788997 444
No 3
>1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A*
Probab=100.00 E-value=2.9e-58 Score=564.87 Aligned_cols=521 Identities=23% Similarity=0.252 Sum_probs=418.6
Q ss_pred CcEEEEEecCCCccccCCCCCcCCCCCCeeeccCCcccccCCccccccCcccEEecccccccccCCccccCCCCCcEEEc
Q 002021 72 QRVTVLNISSLNLTGTIPSQLGNLSSLQSLNLSFNRLFGSIPSAIFTTYTLKYVCLRGNQLSGTFPSFISNKSSLQHLDL 151 (979)
Q Consensus 72 ~~v~~l~l~~~~l~g~~~~~l~~l~~L~~L~L~~n~~~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L 151 (979)
.+++.|+|++|++++..+..++++++|++|||++|++++..|.+++.+++|++|+|++|++++..+..|+++++|++|+|
T Consensus 25 ~~l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~l~~L~~L~L 104 (680)
T 1ziw_A 25 TNITVLNLTHNQLRRLPAANFTRYSQLTSLDVGFNTISKLEPELCQKLPMLKVLNLQHNELSQLSDKTFAFCTNLTELHL 104 (680)
T ss_dssp TTCSEEECCSSCCCCCCGGGGGGGTTCSEEECCSSCCCCCCTTHHHHCTTCCEEECCSSCCCCCCTTTTTTCTTCSEEEC
T ss_pred CCCcEEECCCCCCCCcCHHHHhCCCcCcEEECCCCccCccCHHHHhcccCcCEEECCCCccCccChhhhccCCCCCEEEC
Confidence 57999999999999877778999999999999999999999999999999999999999999776678999999999999
Q ss_pred cCCccCchhhhhhhccCCcccCCCCccceeecccccccccccccccCCCCCCceecCCCeeeecCCcccc--ccCcccee
Q 002021 152 SSNALSGEIRANICREIPREFGNLPELELMSLAANNLQGKIPLKIGNLRNLEKLDIGDNKLVGIAPIAIF--NVSTLKIL 229 (979)
Q Consensus 152 s~N~l~~~~~~~~~~~ip~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~--~l~~L~~L 229 (979)
++|.+++. .|..|+++++|++|+|++|.+++..|..++++++|++|++++|++++..+..+. .+++|+.|
T Consensus 105 ~~n~l~~~--------~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~~~L~~L 176 (680)
T 1ziw_A 105 MSNSIQKI--------KNNPFVKQKNLITLDLSHNGLSSTKLGTQVQLENLQELLLSNNKIQALKSEELDIFANSSLKKL 176 (680)
T ss_dssp CSSCCCCC--------CSCTTTTCTTCCEEECCSSCCSCCCCCSSSCCTTCCEEECCSSCCCCBCHHHHGGGTTCEESEE
T ss_pred CCCccCcc--------ChhHccccCCCCEEECCCCcccccCchhhcccccCCEEEccCCcccccCHHHhhccccccccEE
Confidence 99999753 457899999999999999999999999999999999999999999998887665 45899999
Q ss_pred eccCCCCcCCCcccccCC---------------------------CCCcCEEEccCCccccccCcccccCCC--CcEEec
Q 002021 230 GLQDNSLSGCLSSIGYAR---------------------------LPNLEILSLWGNNFSGTIPRFIFNASK--LSILDL 280 (979)
Q Consensus 230 ~L~~N~l~~~~~~~~~~~---------------------------l~~L~~L~L~~N~l~~~~p~~l~~l~~--L~~L~L 280 (979)
++++|++++..+.. |.. .++|++|++++|.+++..|..+.+++. |++|+|
T Consensus 177 ~L~~n~l~~~~~~~-~~~l~~L~~L~l~~~~l~~~~~~~~~~~l~~~~L~~L~L~~n~l~~~~~~~~~~l~~~~L~~L~L 255 (680)
T 1ziw_A 177 ELSSNQIKEFSPGC-FHAIGRLFGLFLNNVQLGPSLTEKLCLELANTSIRNLSLSNSQLSTTSNTTFLGLKWTNLTMLDL 255 (680)
T ss_dssp ECTTCCCCCBCTTG-GGGSSEECEEECTTCCCHHHHHHHHHHHHTTSCCCEEECTTSCCCEECTTTTGGGGGSCCCEEEC
T ss_pred ECCCCcccccChhh-hhhhhhhhhhhccccccChhhHHHHHHHhhhccccEEEccCCcccccChhHhhccCcCCCCEEEC
Confidence 99999998765431 222 256777778888887777777777644 888888
Q ss_pred cccccccccCccccccccccceeccccccccccchhhhhhcccCCCCccEEEccCCCCcccCC--------ccccccccc
Q 002021 281 EGNSFSGFIPNTFGNLRNLSWLVLSDNYLTSSTQELSFLSSLSNCKFLKYFDLSYNPLYRILP--------RTTVGNLSH 352 (979)
Q Consensus 281 s~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~~--------~~~~~~l~~ 352 (979)
++|++++..|..|+.+++|++|++++|+++...+. .+.++++|++|++++|......+ ...+. ..+
T Consensus 256 s~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~-----~~~~l~~L~~L~L~~~~~~~~~~~~~lp~i~~~~~~-~l~ 329 (680)
T 1ziw_A 256 SYNNLNVVGNDSFAWLPQLEYFFLEYNNIQHLFSH-----SLHGLFNVRYLNLKRSFTKQSISLASLPKIDDFSFQ-WLK 329 (680)
T ss_dssp TTSCCCEECTTTTTTCTTCCEEECCSCCBSEECTT-----TTTTCTTCCEEECTTCBCCC------CCEECTTTTT-TCT
T ss_pred CCCCcCccCcccccCcccccEeeCCCCccCccChh-----hhcCCCCccEEeccchhhhcccccccccccChhhcc-cCC
Confidence 88888877777788888888888888887765432 24445555555554443221000 00011 123
Q ss_pred cccEEEccCccccCCCCccccCCC----------------------------cccEEEecCCCCCchhHHhhhcCCCCcE
Q 002021 353 SLEEFKMSNCNISGGIPEEISNLT----------------------------NLRTIYLGGNKLNGSILITLSKLQKLQD 404 (979)
Q Consensus 353 ~L~~L~L~~n~i~~~~p~~l~~l~----------------------------~L~~L~L~~N~l~~~~~~~l~~l~~L~~ 404 (979)
+|++|++++|++++..+..|..++ +|+.|++++|++++..+..|..+++|+.
T Consensus 330 ~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~~~~~~l~~~~f~~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~ 409 (680)
T 1ziw_A 330 CLEHLNMEDNDIPGIKSNMFTGLINLKYLSLSNSFTSLRTLTNETFVSLAHSPLHILNLTKNKISKIESDAFSWLGHLEV 409 (680)
T ss_dssp TCCEEECCSCCBCCCCTTTTTTCTTCCEEECTTCBSCCCEECTTTTGGGTTSCCCEEECTTSCCCEECTTTTTTCTTCCE
T ss_pred CCCEEECCCCccCCCChhHhccccCCcEEECCCCchhhhhcchhhhcccccCcCceEECCCCCCCeEChhhhhCCCCCCE
Confidence 455555555555544444444444 4555556666777777788888888888
Q ss_pred EEecCcccCCCcc-ccccCCCCCceEecCCCcccccCCccccCCCcCceEecCCCccc---cccccccCcCCCcEEEecc
Q 002021 405 LGLKDNKLEGSIP-YDICNLAELYRLDLDGNKLSGSIPACFSNLTSLRIVSLGSNELT---SIPLTFWNLKDILNLNFSS 480 (979)
Q Consensus 405 L~L~~N~l~~~~p-~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~---~lp~~~~~l~~L~~L~ls~ 480 (979)
|++++|.+.+.+| ..+.++++|++|++++|++.+..+..|..+++|+.|++++|.++ .+|..+..+++|+.|++++
T Consensus 410 L~L~~N~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~p~~~~~l~~L~~L~Ls~ 489 (680)
T 1ziw_A 410 LDLGLNEIGQELTGQEWRGLENIFEIYLSYNKYLQLTRNSFALVPSLQRLMLRRVALKNVDSSPSPFQPLRNLTILDLSN 489 (680)
T ss_dssp EECCSSCCEEECCSGGGTTCTTCCEEECCSCSEEECCTTTTTTCTTCCEEECTTSCCBCTTCSSCTTTTCTTCCEEECCS
T ss_pred EeCCCCcCccccCcccccCcccccEEecCCCCcceeChhhhhcCcccccchhccccccccccCCcccccCCCCCEEECCC
Confidence 8888888876555 67888888888888888888888888888889999999998876 5678899999999999999
Q ss_pred ccccCCCccccccccccceEeccCCccCcccc--------hhhcCCcccceeecCCccccCCCCCccccccccccccccc
Q 002021 481 NFLTGSLPLEIGSLKVLVGIDLSRNNFSGVIP--------TEIGGLKNLEYLFLGYNRLQGSIPNSFGDLISLKFLNLSN 552 (979)
Q Consensus 481 N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p--------~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~ 552 (979)
|++++..|..|..+++|+.|+|++|++++..+ ..|.++++|+.|+|++|+++...+..|.++++|+.|+|++
T Consensus 490 N~l~~i~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~~~~~l~~L~~L~L~~N~l~~i~~~~~~~l~~L~~L~Ls~ 569 (680)
T 1ziw_A 490 NNIANINDDMLEGLEKLEILDLQHNNLARLWKHANPGGPIYFLKGLSHLHILNLESNGFDEIPVEVFKDLFELKIIDLGL 569 (680)
T ss_dssp SCCCCCCTTTTTTCTTCCEEECCSSCCGGGGSTTSTTSCCCTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCS
T ss_pred CCCCcCChhhhccccccCEEeCCCCCccccchhhccCCcchhhcCCCCCCEEECCCCCCCCCCHHHcccccCcceeECCC
Confidence 99998888889999999999999999986532 2478899999999999999965556799999999999999
Q ss_pred ccccccCCccccCccccCeEeccCCcccccCCCCC--CCCCcccccccCCccccCCC
Q 002021 553 NNLSGVIPASLEKLSYLEDLNLSFNQLEGKIPRGG--SFGNFSAQSFEGNELLCGSP 607 (979)
Q Consensus 553 N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~--~~~~~~~~~~~~N~~~c~~p 607 (979)
|+|++..+..|..+++|+.|+|++|++++..|... .++++..+.+.+||+.|+++
T Consensus 570 N~l~~l~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~L~~l~l~~N~~~c~c~ 626 (680)
T 1ziw_A 570 NNLNTLPASVFNNQVSLKSLNLQKNLITSVEKKVFGPAFRNLTELDMRFNPFDCTCE 626 (680)
T ss_dssp SCCCCCCTTTTTTCTTCCEEECTTSCCCBCCHHHHHHHHTTCSEEECTTCCCCBCCC
T ss_pred CCCCcCCHhHhCCCCCCCEEECCCCcCCccChhHhcccccccCEEEccCCCcccCCc
Confidence 99998888888999999999999999998776522 46788889999999999876
No 4
>4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697}
Probab=100.00 E-value=2e-59 Score=566.82 Aligned_cols=494 Identities=19% Similarity=0.238 Sum_probs=295.6
Q ss_pred ChhHHHHHHHHHHhcccCCCCcc------ccccCCCCCCCcc---ceeEeeCCCCcEEEEEecCCCccccCCCCCcCCCC
Q 002021 27 TITDQDALLALKAHITHDPTNFL------AKNWNTSTPVCNW---TGVACEVHSQRVTVLNISSLNLTGTIPSQLGNLSS 97 (979)
Q Consensus 27 ~~~~~~all~~k~~~~~~~~~~~------~~~w~~~~~~c~w---~gv~c~~~~~~v~~l~l~~~~l~g~~~~~l~~l~~ 97 (979)
...|++||.+||+++..+++... ..+|+.+.+||.| .||+|+.. +||+.|+|++++++|.+|+++++|++
T Consensus 28 ~~~d~~aL~~~~~~~~~~~w~~~~~~~~~~~~W~~~~~~c~w~~~~GV~C~~~-~~V~~L~L~~~~l~g~lp~~l~~L~~ 106 (636)
T 4eco_A 28 YIKDYLALKEIWDALNGKNWSQQGFGTQPGANWNFNKELDMWGAQPGVSLNSN-GRVTGLSLEGFGASGRVPDAIGQLTE 106 (636)
T ss_dssp HHHHHHHHHHHHHHTTGGGCCCCC------CCCCCSSCGGGTTCCTTEEECTT-CCEEEEECTTSCCEEEECGGGGGCTT
T ss_pred HHHHHHHHHHHHHHcCCCCcccCCcCCccCCCCCCCCCcccccCCCCeEEcCC-CCEEEEEecCcccCCcCChHHhcCcc
Confidence 34789999999999865544321 1379999999999 99999865 89999999999999999999999999
Q ss_pred CCeeeccCCcc------cc------cCCccccccCcccEEecccccccccCCccccCC-CCCcEEEcc------------
Q 002021 98 LQSLNLSFNRL------FG------SIPSAIFTTYTLKYVCLRGNQLSGTFPSFISNK-SSLQHLDLS------------ 152 (979)
Q Consensus 98 L~~L~L~~n~~------~~------~~p~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l-~~L~~L~Ls------------ 152 (979)
|++|||++|++ .| .+|... +..|+ +++++|.+.+.+|..++.+ ..+..+++.
T Consensus 107 L~~L~Ls~N~~~~~~~~~~~~~~~~~~~~~~--~~~l~-l~l~~~~l~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~l 183 (636)
T 4eco_A 107 LEVLALGSHGEKVNERLFGPKGISANMSDEQ--KQKMR-MHYQKTFVDYDPREDFSDLIKDCINSDPQQKSIKKSSRITL 183 (636)
T ss_dssp CCEEESCCGGGGGTCCSBSTTSBCTTCCHHH--HHHHH-THHHHHHTCCCGGGGSCHHHHHHHHHCTTSCCCCCCCCCCC
T ss_pred ceEEECcCCccccCCccccccccccCchHHH--HHHHH-hhHHHhhhccCchhhHHHHHHHHhhcCccccccccccccch
Confidence 99999999987 44 455444 45566 6777777766666555421 111222222
Q ss_pred --------CCccCchhhhhhhccCCcccCCCCccceeeccccccccc-----------------cccccc--CCCCCCce
Q 002021 153 --------SNALSGEIRANICREIPREFGNLPELELMSLAANNLQGK-----------------IPLKIG--NLRNLEKL 205 (979)
Q Consensus 153 --------~N~l~~~~~~~~~~~ip~~l~~l~~L~~L~L~~N~l~~~-----------------~p~~~~--~l~~L~~L 205 (979)
.|+++| ||++++++++|++|+|++|+++|. +|..++ ++++|++|
T Consensus 184 ~~l~l~~~~n~l~~---------ip~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~~~~~~~~~~~ip~~l~~~~l~~L~~L 254 (636)
T 4eco_A 184 KDTQIGQLSNNITF---------VSKAVMRLTKLRQFYMGNSPFVAENICEAWENENSEYAQQYKTEDLKWDNLKDLTDV 254 (636)
T ss_dssp CTTTTTCCSCEEEE---------ECGGGGGCTTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHTTSCCCGGGCTTCCEE
T ss_pred hhhhhccccCCCcc---------CCHHHhcccCCCEEECcCCccccccccccccccccchhcccCchhhhhcccCCCCEE
Confidence 233332 455555555555555555555553 555555 55555555
Q ss_pred ecCCCeeeecCCccccccCccceeeccCCC-CcC-CCcccccC------CCCCcCEEEccCCccccccCc--ccccCCCC
Q 002021 206 DIGDNKLVGIAPIAIFNVSTLKILGLQDNS-LSG-CLSSIGYA------RLPNLEILSLWGNNFSGTIPR--FIFNASKL 275 (979)
Q Consensus 206 ~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~-l~~-~~~~~~~~------~l~~L~~L~L~~N~l~~~~p~--~l~~l~~L 275 (979)
+|++|++.+.+|..|.++++|+.|+|++|+ +++ ..+. .+. .+++|++|+|++|+++ .+|. .+.++++|
T Consensus 255 ~L~~n~l~~~~p~~l~~l~~L~~L~Ls~n~~l~~~~lp~-~~~~L~~~~~l~~L~~L~L~~n~l~-~ip~~~~l~~l~~L 332 (636)
T 4eco_A 255 EVYNCPNLTKLPTFLKALPEMQLINVACNRGISGEQLKD-DWQALADAPVGEKIQIIYIGYNNLK-TFPVETSLQKMKKL 332 (636)
T ss_dssp EEECCTTCSSCCTTTTTCSSCCEEECTTCTTSCHHHHHH-HHHHHHHSGGGGTCCEEECCSSCCS-SCCCHHHHTTCTTC
T ss_pred EecCCcCCccChHHHhcCCCCCEEECcCCCCCccccchH-HHHhhhccccCCCCCEEECCCCcCC-ccCchhhhccCCCC
Confidence 555555555555555555555555555555 554 2221 122 2356666666666666 5555 56666666
Q ss_pred cEEeccccccccccCccccccccccceeccccccccccchhhhhhcccCCCC-ccEEEccCCCCcccCCccccccccccc
Q 002021 276 SILDLEGNSFSGFIPNTFGNLRNLSWLVLSDNYLTSSTQELSFLSSLSNCKF-LKYFDLSYNPLYRILPRTTVGNLSHSL 354 (979)
Q Consensus 276 ~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~l~~l~~-L~~L~Ls~N~l~~~~~~~~~~~l~~~L 354 (979)
++|++++|+++|.+| .|+.+++|++|+|++|+++.++. .+..+++ |++|++++|++..++. .+...-.++|
T Consensus 333 ~~L~L~~N~l~g~ip-~~~~l~~L~~L~L~~N~l~~lp~------~l~~l~~~L~~L~Ls~N~l~~lp~-~~~~~~l~~L 404 (636)
T 4eco_A 333 GMLECLYNQLEGKLP-AFGSEIKLASLNLAYNQITEIPA------NFCGFTEQVENLSFAHNKLKYIPN-IFDAKSVSVM 404 (636)
T ss_dssp CEEECCSCCCEEECC-CCEEEEEESEEECCSSEEEECCT------TSEEECTTCCEEECCSSCCSSCCS-CCCTTCSSCE
T ss_pred CEEeCcCCcCccchh-hhCCCCCCCEEECCCCccccccH------hhhhhcccCcEEEccCCcCcccch-hhhhcccCcc
Confidence 666666666665566 66666666666666666664432 2445555 6666666665553321 1111111245
Q ss_pred cEEEccCccccCCCCcccc-------CCCcccEEEecCCCCCchhHHhhhcCCCCcEEEecCcccCCCccccccCCCCCc
Q 002021 355 EEFKMSNCNISGGIPEEIS-------NLTNLRTIYLGGNKLNGSILITLSKLQKLQDLGLKDNKLEGSIPYDICNLAELY 427 (979)
Q Consensus 355 ~~L~L~~n~i~~~~p~~l~-------~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~ 427 (979)
++|++++|.+++.+|..+. .+++|++|+|++|+++..++..+..+++|++|++++|+++ .+|.......
T Consensus 405 ~~L~Ls~N~l~~~~p~~l~~~~~~~~~~~~L~~L~Ls~N~l~~lp~~~~~~l~~L~~L~Ls~N~l~-~i~~~~~~~~--- 480 (636)
T 4eco_A 405 SAIDFSYNEIGSVDGKNFDPLDPTPFKGINVSSINLSNNQISKFPKELFSTGSPLSSINLMGNMLT-EIPKNSLKDE--- 480 (636)
T ss_dssp EEEECCSSCTTTTTTCSSCTTCSSCCCCCCEEEEECCSSCCCSCCTHHHHTTCCCSEEECCSSCCS-BCCSSSSEET---
T ss_pred CEEECcCCcCCCcchhhhcccccccccCCCCCEEECcCCccCcCCHHHHccCCCCCEEECCCCCCC-CcCHHHhccc---
Confidence 5555555555555555555 4555555555555555444444444455555555555544 2222211100
Q ss_pred eEecCCCcccccCCccccCCCcCceEecCCCcccccccccc--CcCCCcEEEeccccccCCCccccccccccceEeccCC
Q 002021 428 RLDLDGNKLSGSIPACFSNLTSLRIVSLGSNELTSIPLTFW--NLKDILNLNFSSNFLTGSLPLEIGSLKVLVGIDLSRN 505 (979)
Q Consensus 428 ~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~lp~~~~--~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~Ls~N 505 (979)
+..+.++++|++|+|++|+++.+|..+. .+++|+.|++++|++++ +|..+..+++|+.|+|++|
T Consensus 481 -------------~~~~~~l~~L~~L~Ls~N~l~~lp~~~~~~~l~~L~~L~Ls~N~l~~-ip~~~~~l~~L~~L~Ls~N 546 (636)
T 4eco_A 481 -------------NENFKNTYLLTSIDLRFNKLTKLSDDFRATTLPYLVGIDLSYNSFSK-FPTQPLNSSTLKGFGIRNQ 546 (636)
T ss_dssp -------------TEECTTGGGCCEEECCSSCCCBCCGGGSTTTCTTCCEEECCSSCCSS-CCCGGGGCSSCCEEECCSC
T ss_pred -------------cccccccCCccEEECcCCcCCccChhhhhccCCCcCEEECCCCCCCC-cChhhhcCCCCCEEECCCC
Confidence 0001123367777777777777776665 67777777777777775 6666667777777777665
Q ss_pred ccCcccchhhcCCcccceeecCCccccCCCCCcccccccccccccccccccccCCccccCccccCeEeccCCccccc
Q 002021 506 NFSGVIPTEIGGLKNLEYLFLGYNRLQGSIPNSFGDLISLKFLNLSNNNLSGVIPASLEKLSYLEDLNLSFNQLEGK 582 (979)
Q Consensus 506 ~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~ 582 (979)
+ ++++|++.+.+|..+.++++|++|+|++|++ +.+|..+. ++|+.|+|++|++.+.
T Consensus 547 ~------------------~ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l-~~ip~~~~--~~L~~L~Ls~N~l~~~ 602 (636)
T 4eco_A 547 R------------------DAQGNRTLREWPEGITLCPSLTQLQIGSNDI-RKVNEKIT--PNISVLDIKDNPNISI 602 (636)
T ss_dssp B------------------CTTCCBCCCCCCTTGGGCSSCCEEECCSSCC-CBCCSCCC--TTCCEEECCSCTTCEE
T ss_pred c------------------ccccCcccccChHHHhcCCCCCEEECCCCcC-CccCHhHh--CcCCEEECcCCCCccc
Confidence 4 4455666666666666666666666666666 35555444 5666666666665543
No 5
>4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron}
Probab=100.00 E-value=6.7e-58 Score=561.12 Aligned_cols=496 Identities=20% Similarity=0.215 Sum_probs=319.3
Q ss_pred CCChhHHHHHHHHHHhcccCCCCccccccCCCC-----CC--Ccc------------ceeEeeCCCCcEEEEEecCCCcc
Q 002021 25 SSTITDQDALLALKAHITHDPTNFLAKNWNTST-----PV--CNW------------TGVACEVHSQRVTVLNISSLNLT 85 (979)
Q Consensus 25 ~~~~~~~~all~~k~~~~~~~~~~~~~~w~~~~-----~~--c~w------------~gv~c~~~~~~v~~l~l~~~~l~ 85 (979)
++..+|++||++||+++. || +|+.+. +| |+| .||+|+. .+||+.|+|++++++
T Consensus 265 ~~~~~d~~ALl~~k~~l~-~~------~W~~~~~~~~~~~~~C~W~~~~~~~~w~~~~GV~C~~-~~~V~~L~Ls~~~L~ 336 (876)
T 4ecn_A 265 AEYIKDYKALKAIWEALD-GK------NWRYYSGTINNTIHSLNWNFNKELDMWGDQPGVDLDN-NGRVTGLSLAGFGAK 336 (876)
T ss_dssp CHHHHHHHHHHHHHHHTT-GG------GCCCCCSSCSSCCCCCSCCCSSCGGGTTCCTTEEECT-TSCEEEEECTTTCCE
T ss_pred ccchHHHHHHHHHHHHcC-CC------CCCcCCCcccccCCccccccccccccccCcCceEecC-CCCEEEEECccCCCC
Confidence 344579999999999994 44 575443 44 999 9999986 689999999999999
Q ss_pred ccCCCCCcCCCCCCeeec-cCCcccccCCcccc-----------------------------------------------
Q 002021 86 GTIPSQLGNLSSLQSLNL-SFNRLFGSIPSAIF----------------------------------------------- 117 (979)
Q Consensus 86 g~~~~~l~~l~~L~~L~L-~~n~~~~~~p~~~~----------------------------------------------- 117 (979)
|.+|+++++|++|++||| ++|.++|..|-...
T Consensus 337 G~ip~~l~~L~~L~~LdLss~N~lsG~~~~~~~~~~~~l~~~~l~~lr~~~~~~~l~~~~~~~~s~l~~~~l~~~~~~~~ 416 (876)
T 4ecn_A 337 GRVPDAIGQLTELKVLSFGTHSETVSGRLFGDEELTPDMSEERKHRIRMHYKKMFLDYDQRLNLSDLLQDAINRNPEMKP 416 (876)
T ss_dssp EEECGGGGGCTTCCEEESCCTTHHHHTTCBTTBCCCSSCCHHHHHHHHTHHHHHHTCCCGGGGSCHHHHHHHHTCTTSCC
T ss_pred CcCchHHhccccceEeeecccccccccccccccccccccchhHHHHHHHhhhhhhhccCcchhhhHHHHHHhhhCccccc
Confidence 999999999999999999 99999887553311
Q ss_pred ----ccCcccEEeccc--ccccccCCccccCCCCCcEEEccCCccCchh-hhh--------hhccCCcccC--CCCccce
Q 002021 118 ----TTYTLKYVCLRG--NQLSGTFPSFISNKSSLQHLDLSSNALSGEI-RAN--------ICREIPREFG--NLPELEL 180 (979)
Q Consensus 118 ----~l~~L~~L~L~~--n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~-~~~--------~~~~ip~~l~--~l~~L~~ 180 (979)
....++.+.+.. |++++ +|..|+++++|++|+|++|.|+|.. ... ....+|+.++ ++++|++
T Consensus 417 i~~~~~l~l~~l~l~~~~N~L~~-IP~~l~~L~~L~~L~Ls~N~Lsg~~i~~~~~~~s~n~~~g~iP~~l~f~~L~~L~~ 495 (876)
T 4ecn_A 417 IKKDSRISLKDTQIGNLTNRITF-ISKAIQRLTKLQIIYFANSPFTYDNIAVDWEDANSDYAKQYENEELSWSNLKDLTD 495 (876)
T ss_dssp CCCCCCCCCCTTTTTCCSCEEEE-ECGGGGGCTTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHTTSCCCGGGCTTCCE
T ss_pred cccccccchhhceeccccCcccc-hhHHHhcCCCCCEEECcCCcCCCCcccccccccccccccccCChhhhhccCCCCCE
Confidence 122334444443 88887 8888888888999999988888620 000 0001555555 6666666
Q ss_pred eecccccccccccccccCCCCCCceecCCCe-eee-cCCccccccCccceeeccCCCCcCCCcccccCCCCCcCEEEccC
Q 002021 181 MSLAANNLQGKIPLKIGNLRNLEKLDIGDNK-LVG-IAPIAIFNVSTLKILGLQDNSLSGCLSSIGYARLPNLEILSLWG 258 (979)
Q Consensus 181 L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~-l~~-~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~l~~L~~L~L~~ 258 (979)
|+|++|++.+.+|..|+++++|++|+|++|+ +++ .+|..+.+++ ..+..+++|++|+|++
T Consensus 496 L~Ls~N~l~~~iP~~l~~L~~L~~L~Ls~N~~lsg~~iP~~i~~L~------------------~~~~~l~~L~~L~Ls~ 557 (876)
T 4ecn_A 496 VELYNCPNMTQLPDFLYDLPELQSLNIACNRGISAAQLKADWTRLA------------------DDEDTGPKIQIFYMGY 557 (876)
T ss_dssp EEEESCTTCCSCCGGGGGCSSCCEEECTTCTTSCHHHHHHHHHHHH------------------HCTTTTTTCCEEECCS
T ss_pred EECcCCCCCccChHHHhCCCCCCEEECcCCCCcccccchHHHHhhh------------------hcccccCCccEEEeeC
Confidence 6666666666666666666666666666665 555 4455444433 0233455666666666
Q ss_pred CccccccCc--ccccCCCCcEEeccccccccccCccccccccccceeccccccccccchhhhhhcccCCCC-ccEEEccC
Q 002021 259 NNFSGTIPR--FIFNASKLSILDLEGNSFSGFIPNTFGNLRNLSWLVLSDNYLTSSTQELSFLSSLSNCKF-LKYFDLSY 335 (979)
Q Consensus 259 N~l~~~~p~--~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~l~~l~~-L~~L~Ls~ 335 (979)
|+++ .+|. .+.++++|++|+|++|+++ .+| .|+.+++|+.|+|++|+++.++. .+.++++ |++|+|++
T Consensus 558 N~L~-~ip~~~~l~~L~~L~~L~Ls~N~l~-~lp-~~~~L~~L~~L~Ls~N~l~~lp~------~l~~l~~~L~~L~Ls~ 628 (876)
T 4ecn_A 558 NNLE-EFPASASLQKMVKLGLLDCVHNKVR-HLE-AFGTNVKLTDLKLDYNQIEEIPE------DFCAFTDQVEGLGFSH 628 (876)
T ss_dssp SCCC-BCCCHHHHTTCTTCCEEECTTSCCC-BCC-CCCTTSEESEEECCSSCCSCCCT------TSCEECTTCCEEECCS
T ss_pred CcCC-ccCChhhhhcCCCCCEEECCCCCcc-cch-hhcCCCcceEEECcCCccccchH------HHhhccccCCEEECcC
Confidence 6666 5555 5666666666666666666 445 56666666666666666664442 2455555 66666666
Q ss_pred CCCcccCCccccccccccccEEEccCccccCCCCcc---cc--CCCcccEEEecCCCCCchhHHhhhcCCCCcEEEecCc
Q 002021 336 NPLYRILPRTTVGNLSHSLEEFKMSNCNISGGIPEE---IS--NLTNLRTIYLGGNKLNGSILITLSKLQKLQDLGLKDN 410 (979)
Q Consensus 336 N~l~~~~~~~~~~~l~~~L~~L~L~~n~i~~~~p~~---l~--~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N 410 (979)
|++..++ ..+...-.++|+.|++++|++++.+|.. +. .+++|+.|+|++|+++..+...+..+++|+.|+|++|
T Consensus 629 N~L~~lp-~~~~~~~~~~L~~L~Ls~N~l~g~ip~l~~~l~~~~~~~L~~L~Ls~N~L~~lp~~~~~~l~~L~~L~Ls~N 707 (876)
T 4ecn_A 629 NKLKYIP-NIFNAKSVYVMGSVDFSYNKIGSEGRNISCSMDDYKGINASTVTLSYNEIQKFPTELFATGSPISTIILSNN 707 (876)
T ss_dssp SCCCSCC-SCCCTTCSSCEEEEECCSSCTTTTSSSCSSCTTTCCCCCEEEEECCSSCCCSCCHHHHHTTCCCSEEECCSC
T ss_pred CCCCcCc-hhhhccccCCCCEEECcCCcCCCccccchhhhccccCCCcCEEEccCCcCCccCHHHHccCCCCCEEECCCC
Confidence 6665432 2111111124777777777776655432 22 3447888888888888665566667777888888777
Q ss_pred ccCCCccccccCC--------CCCceEecCCCcccccCCcccc--CCCcCceEecCCCccccccccccCcCCCcEEEecc
Q 002021 411 KLEGSIPYDICNL--------AELYRLDLDGNKLSGSIPACFS--NLTSLRIVSLGSNELTSIPLTFWNLKDILNLNFSS 480 (979)
Q Consensus 411 ~l~~~~p~~~~~l--------~~L~~L~Ls~N~l~~~~~~~~~--~l~~L~~L~L~~N~l~~lp~~~~~l~~L~~L~ls~ 480 (979)
++. .+|..+... ++|+.|+|++|+|+ .+|..+. .+++|+.|+|++|+|+.+|..+..+++|+.|+|++
T Consensus 708 ~L~-~ip~~~~~~~~~~l~nl~~L~~L~Ls~N~L~-~lp~~l~~~~l~~L~~L~Ls~N~L~~lp~~l~~L~~L~~L~Ls~ 785 (876)
T 4ecn_A 708 LMT-SIPENSLKPKDGNYKNTYLLTTIDLRFNKLT-SLSDDFRATTLPYLSNMDVSYNCFSSFPTQPLNSSQLKAFGIRH 785 (876)
T ss_dssp CCS-CCCTTSSSCTTSCCTTGGGCCEEECCSSCCC-CCCGGGSTTTCTTCCEEECCSSCCSSCCCGGGGCTTCCEEECCC
T ss_pred cCC-ccChHHhccccccccccCCccEEECCCCCCc-cchHHhhhccCCCcCEEEeCCCCCCccchhhhcCCCCCEEECCC
Confidence 777 455443322 25666666666665 4455554 55555555555555555555555555555555555
Q ss_pred ccccCCCccccccccccceEeccCCccCcccchhhcCCcccceeecCCccccCCCCCcccccccccccccccccccccCC
Q 002021 481 NFLTGSLPLEIGSLKVLVGIDLSRNNFSGVIPTEIGGLKNLEYLFLGYNRLQGSIPNSFGDLISLKFLNLSNNNLSGVIP 560 (979)
Q Consensus 481 N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p 560 (979)
|+ ++++|++.+.+|..|.++++|+.|+|++|+| +.+|..+. ++|+.|||++|++....+
T Consensus 786 N~------------------~ls~N~l~~~ip~~l~~L~~L~~L~Ls~N~L-~~Ip~~l~--~~L~~LdLs~N~l~~i~~ 844 (876)
T 4ecn_A 786 QR------------------DAEGNRILRQWPTGITTCPSLIQLQIGSNDI-RKVDEKLT--PQLYILDIADNPNISIDV 844 (876)
T ss_dssp CB------------------CTTCCBCCCCCCTTGGGCSSCCEEECCSSCC-CBCCSCCC--SSSCEEECCSCTTCEEEC
T ss_pred CC------------------CcccccccccChHHHhcCCCCCEEECCCCCC-CccCHhhc--CCCCEEECCCCCCCccCh
Confidence 44 3455777777777777777777777777777 46666654 577777777777776666
Q ss_pred ccccCccccCeEeccCCccc
Q 002021 561 ASLEKLSYLEDLNLSFNQLE 580 (979)
Q Consensus 561 ~~~~~l~~L~~L~L~~N~l~ 580 (979)
..+.....+..+.|.+|++.
T Consensus 845 ~~~~~~~~~~~~~L~~n~~~ 864 (876)
T 4ecn_A 845 TSVCPYIEAGMYVLLYDKTQ 864 (876)
T ss_dssp GGGHHHHHTTCCEEECCTTS
T ss_pred HHccccccchheeecCCCcc
Confidence 66666656666666666554
No 6
>3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A*
Probab=100.00 E-value=1.6e-57 Score=550.68 Aligned_cols=504 Identities=22% Similarity=0.209 Sum_probs=350.9
Q ss_pred cceeEeeCC---------CCcEEEEEecCCCccccCCCCCcCCCCCCeeeccCCcccccCCccccccCcccEEecccccc
Q 002021 62 WTGVACEVH---------SQRVTVLNISSLNLTGTIPSQLGNLSSLQSLNLSFNRLFGSIPSAIFTTYTLKYVCLRGNQL 132 (979)
Q Consensus 62 w~gv~c~~~---------~~~v~~l~l~~~~l~g~~~~~l~~l~~L~~L~L~~n~~~~~~p~~~~~l~~L~~L~L~~n~l 132 (979)
+.-|.|... ...++.|||++|.+++..|..++++++|++|||++|++++..|.+|..+++|++|+|++|++
T Consensus 14 ~~~~~c~~~~l~~iP~~l~~~l~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l 93 (606)
T 3t6q_A 14 NKTYNCENLGLNEIPGTLPNSTECLEFSFNVLPTIQNTTFSRLINLTFLDLTRCQIYWIHEDTFQSQHRLDTLVLTANPL 93 (606)
T ss_dssp TTEEECTTSCCSSCCTTSCTTCCEEECTTCCCSEECTTTSTTCTTCSEEECTTCCCCEECTTTTTTCTTCCEEECTTCCC
T ss_pred CceEECCCCCcccCcCCCCCcCcEEEccCCccCcCChhHhccCccceEEECCCCccceeChhhccCccccCeeeCCCCcc
Confidence 445677532 24688889999998887788888899999999999988888888888888999999999988
Q ss_pred cccCCccccCCCCCcEEEccCCccCchhhhhhhccCCcccCCCCccceeecccccccccccccccCCCCCCceecCCCee
Q 002021 133 SGTFPSFISNKSSLQHLDLSSNALSGEIRANICREIPREFGNLPELELMSLAANNLQGKIPLKIGNLRNLEKLDIGDNKL 212 (979)
Q Consensus 133 ~~~~p~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~~ip~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l 212 (979)
++..|..|+++++|++|+|++|.+++. .|..++++++|++|+|++|++++..+..+..+++|++|++++|++
T Consensus 94 ~~~~~~~~~~l~~L~~L~L~~n~i~~l--------~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l 165 (606)
T 3t6q_A 94 IFMAETALSGPKALKHLFFIQTGISSI--------DFIPLHNQKTLESLYLGSNHISSIKLPKGFPTEKLKVLDFQNNAI 165 (606)
T ss_dssp SEECTTTTSSCTTCCEEECTTSCCSCG--------GGSCCTTCTTCCEEECCSSCCCCCCCCTTCCCTTCCEEECCSSCC
T ss_pred cccChhhhcccccccEeeccccCcccC--------CcchhccCCcccEEECCCCcccccCcccccCCcccCEEEcccCcc
Confidence 888888888899999999999888753 256688888899999999988875444455588899999999988
Q ss_pred eecCCccccccCccc--eeeccCCCCcCCCcccccCCCCCcCEEEccCCcccc--------------------------c
Q 002021 213 VGIAPIAIFNVSTLK--ILGLQDNSLSGCLSSIGYARLPNLEILSLWGNNFSG--------------------------T 264 (979)
Q Consensus 213 ~~~~p~~l~~l~~L~--~L~L~~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~--------------------------~ 264 (979)
+++.|..|..+++|+ .|++++|.+++..+.. | ...+|++|++++|.... .
T Consensus 166 ~~~~~~~~~~l~~L~~l~L~l~~n~l~~~~~~~-~-~~~~L~~L~l~~~~~~~~~~~~l~~~~l~~l~~~~~~~~~~~~i 243 (606)
T 3t6q_A 166 HYLSKEDMSSLQQATNLSLNLNGNDIAGIEPGA-F-DSAVFQSLNFGGTQNLLVIFKGLKNSTIQSLWLGTFEDMDDEDI 243 (606)
T ss_dssp CEECHHHHHTTTTCCSEEEECTTCCCCEECTTT-T-TTCEEEEEECTTCSCHHHHHHHTTTCEEEEEECCCCTTSCCCCC
T ss_pred cccChhhhhhhcccceeEEecCCCccCccChhH-h-hhccccccccCCchhHHHHhhhccccchhheechhhcccccccc
Confidence 888888888888888 8888888888766543 2 44678888888775110 0
Q ss_pred cCcccccCC--CCcEEeccccccccccCccccccccccceeccccccccccchhhhhhcccCCCCccEEEccCCCCcccC
Q 002021 265 IPRFIFNAS--KLSILDLEGNSFSGFIPNTFGNLRNLSWLVLSDNYLTSSTQELSFLSSLSNCKFLKYFDLSYNPLYRIL 342 (979)
Q Consensus 265 ~p~~l~~l~--~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~ 342 (979)
.+..+..+. +|+.|++++|.+++..+..|+++++|++|++++|+++.+|. .+..+++|++|++++|++..+.
T Consensus 244 ~~~~~~~l~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~lp~------~l~~l~~L~~L~l~~n~l~~~~ 317 (606)
T 3t6q_A 244 SPAVFEGLCEMSVESINLQKHYFFNISSNTFHCFSGLQELDLTATHLSELPS------GLVGLSTLKKLVLSANKFENLC 317 (606)
T ss_dssp CGGGGGGGGGSEEEEEECTTCCCSSCCTTTTTTCTTCSEEECTTSCCSCCCS------SCCSCTTCCEEECTTCCCSBGG
T ss_pred ChhHhchhhcCceeEEEeecCccCccCHHHhccccCCCEEeccCCccCCCCh------hhcccccCCEEECccCCcCcCc
Confidence 011111111 56667777777766666667777777777777777665543 2556666777777777666654
Q ss_pred CccccccccccccEEEccCccccCCCCc-cccCCCcccEEEecCCCCCchh--HHhhhcCCCCcEEEecCcccCCCcccc
Q 002021 343 PRTTVGNLSHSLEEFKMSNCNISGGIPE-EISNLTNLRTIYLGGNKLNGSI--LITLSKLQKLQDLGLKDNKLEGSIPYD 419 (979)
Q Consensus 343 ~~~~~~~l~~~L~~L~L~~n~i~~~~p~-~l~~l~~L~~L~L~~N~l~~~~--~~~l~~l~~L~~L~L~~N~l~~~~p~~ 419 (979)
+..+ .. .++|++|++++|.+.+.+|. .+..+++|++|++++|.+++.. +..+..+++|++|++++|.+.+..|..
T Consensus 318 ~~~~-~~-l~~L~~L~l~~n~~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~ 395 (606)
T 3t6q_A 318 QISA-SN-FPSLTHLSIKGNTKRLELGTGCLENLENLRELDLSHDDIETSDCCNLQLRNLSHLQSLNLSYNEPLSLKTEA 395 (606)
T ss_dssp GGCG-GG-CTTCSEEECCSCSSCCBCCSSTTTTCTTCCEEECCSSCCCEEEESTTTTTTCTTCCEEECCSCSCEEECTTT
T ss_pred hhhh-hc-cCcCCEEECCCCCcccccchhhhhccCcCCEEECCCCccccccCcchhcccCCCCCEEECCCCcCCcCCHHH
Confidence 4322 22 24567777777766654443 3666677777777777766655 556666677777777777666666666
Q ss_pred ccCCCCCceEecCCCcccccCCc-cccCCCcCceEecCCCccccc-cccccCcCCCcEEEeccccccCC---Cccccccc
Q 002021 420 ICNLAELYRLDLDGNKLSGSIPA-CFSNLTSLRIVSLGSNELTSI-PLTFWNLKDILNLNFSSNFLTGS---LPLEIGSL 494 (979)
Q Consensus 420 ~~~l~~L~~L~Ls~N~l~~~~~~-~~~~l~~L~~L~L~~N~l~~l-p~~~~~l~~L~~L~ls~N~l~~~---~p~~~~~l 494 (979)
+..+++|+.|++++|++.+..+. .+..+++|++|++++|.++.. |..+..+++|+.|++++|++++. .+..+..+
T Consensus 396 ~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~l 475 (606)
T 3t6q_A 396 FKECPQLELLDLAFTRLKVKDAQSPFQNLHLLKVLNLSHSLLDISSEQLFDGLPALQHLNLQGNHFPKGNIQKTNSLQTL 475 (606)
T ss_dssp TTTCTTCSEEECTTCCEECCTTCCTTTTCTTCCEEECTTCCCBTTCTTTTTTCTTCCEEECTTCBCGGGEECSSCGGGGC
T ss_pred hcCCccCCeEECCCCcCCCcccchhhhCcccCCEEECCCCccCCcCHHHHhCCCCCCEEECCCCCCCccccccchhhccC
Confidence 66666777777777776655443 366666777777777766643 44566666677777777766652 23456666
Q ss_pred cccceEeccCCccCcccchhhcCCcccceeecCCccccCCCCCcccccccccccccccccccccCCccccCccccCeEec
Q 002021 495 KVLVGIDLSRNNFSGVIPTEIGGLKNLEYLFLGYNRLQGSIPNSFGDLISLKFLNLSNNNLSGVIPASLEKLSYLEDLNL 574 (979)
Q Consensus 495 ~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L 574 (979)
++|+.|+|++|++++..|..|+++++|+.|+|++|++++..|..+.++++| +|+|++|++++.+|..+..+++|+.|++
T Consensus 476 ~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L-~L~L~~N~l~~~~~~~~~~l~~L~~L~l 554 (606)
T 3t6q_A 476 GRLEILVLSFCDLSSIDQHAFTSLKMMNHVDLSHNRLTSSSIEALSHLKGI-YLNLASNHISIILPSLLPILSQQRTINL 554 (606)
T ss_dssp TTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCGGGGGGGTTCCSC-EEECCSSCCCCCCGGGHHHHHTSSEEEC
T ss_pred CCccEEECCCCccCccChhhhccccCCCEEECCCCccCcCChhHhCccccc-EEECcCCcccccCHhhcccCCCCCEEeC
Confidence 667777777777766666666667777777777777766666666666666 6777777776666666666666777777
Q ss_pred cCCcccccCC
Q 002021 575 SFNQLEGKIP 584 (979)
Q Consensus 575 ~~N~l~~~~p 584 (979)
++|+++|.++
T Consensus 555 ~~N~~~c~c~ 564 (606)
T 3t6q_A 555 RQNPLDCTCS 564 (606)
T ss_dssp TTCCEECSGG
T ss_pred CCCCccccCC
Confidence 7777666555
No 7
>3j0a_A TOLL-like receptor 5; membrane protein, leucine-rich repeat, asymmetric homodimer, glycoprotein, immune system; HET: NAG FUC; 26.00A {Homo sapiens}
Probab=100.00 E-value=3.4e-56 Score=557.00 Aligned_cols=516 Identities=24% Similarity=0.272 Sum_probs=344.1
Q ss_pred CccceeEeeCCCCcEEEEEecCCCccccCCCCCcCCCCCCeeeccCCcccccC-CccccccCcccEEecccccccccCCc
Q 002021 60 CNWTGVACEVHSQRVTVLNISSLNLTGTIPSQLGNLSSLQSLNLSFNRLFGSI-PSAIFTTYTLKYVCLRGNQLSGTFPS 138 (979)
Q Consensus 60 c~w~gv~c~~~~~~v~~l~l~~~~l~g~~~~~l~~l~~L~~L~L~~n~~~~~~-p~~~~~l~~L~~L~L~~n~l~~~~p~ 138 (979)
|.|.+|.+ ...+++.|||++|.+++..|..+.++++|++|||++|.+.+.+ |.++..+++|++|+|++|++++..|.
T Consensus 14 ~~L~~vP~--lp~~l~~LdLs~N~i~~i~~~~~~~l~~L~~LdLs~n~~~~~i~~~~f~~L~~L~~L~Ls~N~l~~~~p~ 91 (844)
T 3j0a_A 14 CNLTQVPQ--VLNTTERLLLSFNYIRTVTASSFPFLEQLQLLELGSQYTPLTIDKEAFRNLPNLRILDLGSSKIYFLHPD 91 (844)
T ss_dssp CCSSCCCS--SCTTCCEEEEESCCCCEECSSSCSSCCSCSEEEECTTCCCCEECTTTTSSCTTCCEEECTTCCCCEECTT
T ss_pred CCCCCCCC--CCCCcCEEECCCCcCCccChhHCcccccCeEEeCCCCCCccccCHHHhcCCCCCCEEECCCCcCcccCHh
Confidence 67888877 4678999999999999988999999999999999999877777 78899999999999999999999999
Q ss_pred cccCCCCCcEEEccCCccCchhhhhhhccCCcc--cCCCCccceeeccccccccccc-ccccCCCCCCceecCCCeeeec
Q 002021 139 FISNKSSLQHLDLSSNALSGEIRANICREIPRE--FGNLPELELMSLAANNLQGKIP-LKIGNLRNLEKLDIGDNKLVGI 215 (979)
Q Consensus 139 ~l~~l~~L~~L~Ls~N~l~~~~~~~~~~~ip~~--l~~l~~L~~L~L~~N~l~~~~p-~~~~~l~~L~~L~Ls~N~l~~~ 215 (979)
.|+++++|++|+|++|.+++. +|.. |+++++|++|+|++|.+++..+ ..|+++++|++|+|++|++++.
T Consensus 92 ~~~~l~~L~~L~Ls~n~l~~~--------~~~~~~~~~L~~L~~L~Ls~N~l~~~~~~~~~~~L~~L~~L~Ls~N~i~~~ 163 (844)
T 3j0a_A 92 AFQGLFHLFELRLYFCGLSDA--------VLKDGYFRNLKALTRLDLSKNQIRSLYLHPSFGKLNSLKSIDFSSNQIFLV 163 (844)
T ss_dssp SSCSCSSCCCEECTTCCCSSC--------CSTTCCCSSCSSCCEEEEESCCCCCCCCCGGGGTCSSCCEEEEESSCCCCC
T ss_pred HccCCcccCEeeCcCCCCCcc--------cccCccccccCCCCEEECCCCcccccccchhHhhCCCCCEEECCCCcCCee
Confidence 999999999999999999864 4544 9999999999999999998765 6799999999999999999999
Q ss_pred CCcccccc--CccceeeccCCCCcCCCcccccCCCC------CcCEEEccCCccccccCcccccC---CCCcEEeccc--
Q 002021 216 APIAIFNV--STLKILGLQDNSLSGCLSSIGYARLP------NLEILSLWGNNFSGTIPRFIFNA---SKLSILDLEG-- 282 (979)
Q Consensus 216 ~p~~l~~l--~~L~~L~L~~N~l~~~~~~~~~~~l~------~L~~L~L~~N~l~~~~p~~l~~l---~~L~~L~Ls~-- 282 (979)
.+..+..+ ++|+.|+|+.|.+.+..+. .+..++ +|++|++++|++++.+|..+... .+++.|+++.
T Consensus 164 ~~~~l~~l~~~~L~~L~L~~n~l~~~~~~-~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~~l~~~~l~~L~l~~~~ 242 (844)
T 3j0a_A 164 CEHELEPLQGKTLSFFSLAANSLYSRVSV-DWGKCMNPFRNMVLEILDVSGNGWTVDITGNFSNAISKSQAFSLILAHHI 242 (844)
T ss_dssp CSGGGHHHHHCSSCCCEECCSBSCCCCCC-CCCSSSCTTTTCCBSEEBCSSCCSSTTTTSGGGGTSCSCCBSEEECCSSC
T ss_pred CHHHcccccCCccceEECCCCcccccccc-chhhcCCccccCceeEEecCCCcCchhHHHHHHhhcCcccccceeccccc
Confidence 99999988 8999999999999875543 233444 49999999999988777766543 4455555542
Q ss_pred -------cccccccCcccccc--ccccceeccccccccccchhhhhhcccCCCCccEEEccCCCCcccCCcccccccccc
Q 002021 283 -------NSFSGFIPNTFGNL--RNLSWLVLSDNYLTSSTQELSFLSSLSNCKFLKYFDLSYNPLYRILPRTTVGNLSHS 353 (979)
Q Consensus 283 -------N~l~~~~~~~~~~l--~~L~~L~Ls~N~l~~~~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~~ 353 (979)
|.+.+..+..|.++ ++|+.|+|++|.++..+.. .+..+++|++|+|++|++..+.+..+. . .++
T Consensus 243 ~~~~~~~~~l~~~~~~~f~~l~~~~L~~L~Ls~n~l~~~~~~-----~~~~l~~L~~L~L~~n~i~~~~~~~~~-~-l~~ 315 (844)
T 3j0a_A 243 MGAGFGFHNIKDPDQNTFAGLARSSVRHLDLSHGFVFSLNSR-----VFETLKDLKVLNLAYNKINKIADEAFY-G-LDN 315 (844)
T ss_dssp CBCSSSCSSSTTGGGTTTTTTTTSCCCEEECTTCCCCEECSC-----CSSSCCCCCEEEEESCCCCEECTTTTT-T-CSS
T ss_pred ccccccccccCCCChhhhhccccCCccEEECCCCcccccChh-----hhhcCCCCCEEECCCCcCCCCChHHhc-C-CCC
Confidence 22333333344443 4566666666655554332 245555666666666665555443322 1 235
Q ss_pred ccEEEccCccccCCCCccccCCCcccEEEecCCCCCchhHHhhhcCCCCcEEEecCcccCCCccccccCCCCCceEecCC
Q 002021 354 LEEFKMSNCNISGGIPEEISNLTNLRTIYLGGNKLNGSILITLSKLQKLQDLGLKDNKLEGSIPYDICNLAELYRLDLDG 433 (979)
Q Consensus 354 L~~L~L~~n~i~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~ 433 (979)
|++|++++|.+++..|..|..+++|+.|++++|++.+..+..|..+++|+.|++++|.+++. + .+++|+.|++++
T Consensus 316 L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~i-~----~~~~L~~L~l~~ 390 (844)
T 3j0a_A 316 LQVLNLSYNLLGELYSSNFYGLPKVAYIDLQKNHIAIIQDQTFKFLEKLQTLDLRDNALTTI-H----FIPSIPDIFLSG 390 (844)
T ss_dssp CCEEEEESCCCSCCCSCSCSSCTTCCEEECCSCCCCCCCSSCSCSCCCCCEEEEETCCSCCC-S----SCCSCSEEEEES
T ss_pred CCEEECCCCCCCccCHHHhcCCCCCCEEECCCCCCCccChhhhcCCCCCCEEECCCCCCCcc-c----CCCCcchhccCC
Confidence 66666666666555555566666666666666666555555555566666666666655531 1 245555666666
Q ss_pred CcccccCCccccCCCcCceEecCCCccccccc--cccCcCCCcEEEeccccccCCCcc-ccccccccceEeccCCccC--
Q 002021 434 NKLSGSIPACFSNLTSLRIVSLGSNELTSIPL--TFWNLKDILNLNFSSNFLTGSLPL-EIGSLKVLVGIDLSRNNFS-- 508 (979)
Q Consensus 434 N~l~~~~~~~~~~l~~L~~L~L~~N~l~~lp~--~~~~l~~L~~L~ls~N~l~~~~p~-~~~~l~~L~~L~Ls~N~l~-- 508 (979)
|+++ .+|.. ..+++.|++++|+++.++. .+..+++|+.|++++|++++..+. .+..+++|+.|+|++|.++
T Consensus 391 N~l~-~l~~~---~~~l~~L~ls~N~l~~l~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~L~~L~Ls~N~l~~~ 466 (844)
T 3j0a_A 391 NKLV-TLPKI---NLTANLIHLSENRLENLDILYFLLRVPHLQILILNQNRFSSCSGDQTPSENPSLEQLFLGENMLQLA 466 (844)
T ss_dssp CCCC-CCCCC---CTTCCEEECCSCCCCSSTTHHHHTTCTTCCEEEEESCCCCCCCSSSSSCSCTTCCBCEEESCCCSSS
T ss_pred CCcc-ccccc---ccccceeecccCccccCchhhhhhcCCccceeeCCCCcccccccccccccCCccccccCCCCccccc
Confidence 6655 22322 3345555566665554433 233555556666666655543322 2334555555566665554
Q ss_pred ---cccchhhcCCcccceeecCCccccCCCCCcccccccccccccccccccccCCccccCccccCeEeccCCcccccCCC
Q 002021 509 ---GVIPTEIGGLKNLEYLFLGYNRLQGSIPNSFGDLISLKFLNLSNNNLSGVIPASLEKLSYLEDLNLSFNQLEGKIPR 585 (979)
Q Consensus 509 ---~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~ 585 (979)
+..+..|.++++|+.|+|++|+|++.+|..|.++++|+.|+|++|+|++..|..+. ++|+.|+|++|++++.+|.
T Consensus 467 ~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~~~--~~L~~L~Ls~N~l~~~~~~ 544 (844)
T 3j0a_A 467 WETELCWDVFEGLSHLQVLYLNHNYLNSLPPGVFSHLTALRGLSLNSNRLTVLSHNDLP--ANLEILDISRNQLLAPNPD 544 (844)
T ss_dssp CCSCCCSSCSSCBCCEECCCCCHHHHTTCCTTSSSSCCSCSEEEEESCCCSSCCCCCCC--SCCCEEEEEEECCCCCCSC
T ss_pred cccccchhhhcCcccccEEECCCCcccccChhHccchhhhheeECCCCCCCccChhhhh--ccccEEECCCCcCCCCChh
Confidence 23334455555566666666666555555555556666666666665554444443 5555566666666555553
Q ss_pred CCCCCCcccccccCCccccCC
Q 002021 586 GGSFGNFSAQSFEGNELLCGS 606 (979)
Q Consensus 586 ~~~~~~~~~~~~~~N~~~c~~ 606 (979)
.|..+..+.+.+||+.|.+
T Consensus 545 --~~~~L~~l~l~~Np~~C~c 563 (844)
T 3j0a_A 545 --VFVSLSVLDITHNKFICEC 563 (844)
T ss_dssp --CCSSCCEEEEEEECCCCSS
T ss_pred --HhCCcCEEEecCCCccccc
Confidence 2445555555555555544
No 8
>3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A*
Probab=100.00 E-value=2.4e-56 Score=540.42 Aligned_cols=488 Identities=21% Similarity=0.174 Sum_probs=396.7
Q ss_pred CCcEEEEEecCCCccccCCCCCcCCCCCCeeeccCCcccccCCccccccCcccEEecccccccccCCccccCCCCCcEEE
Q 002021 71 SQRVTVLNISSLNLTGTIPSQLGNLSSLQSLNLSFNRLFGSIPSAIFTTYTLKYVCLRGNQLSGTFPSFISNKSSLQHLD 150 (979)
Q Consensus 71 ~~~v~~l~l~~~~l~g~~~~~l~~l~~L~~L~L~~n~~~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~ 150 (979)
..+++.|+|++|.+++..+..++++++|++|||++|++++..|.++..+++|++|+|++|++++..|..|+++++|++|+
T Consensus 31 ~~~l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~i~~~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~ 110 (606)
T 3vq2_A 31 PSSTKNIDLSFNPLKILKSYSFSNFSELQWLDLSRCEIETIEDKAWHGLHHLSNLILTGNPIQSFSPGSFSGLTSLENLV 110 (606)
T ss_dssp CTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCCCCTTSSTTCTTCCEEE
T ss_pred CCCcCEEECCCCCcCEeChhhccCCccCcEEeCCCCcccccCHHHhhchhhcCEeECCCCcccccChhhcCCcccCCEEE
Confidence 35799999999999998888999999999999999999988899999999999999999999999999999999999999
Q ss_pred ccCCccCchhhhhhhccCCcccCCCCccceeecccccccc-cccccccCCCCCCceecCCCeeeecCCccccccCccc--
Q 002021 151 LSSNALSGEIRANICREIPREFGNLPELELMSLAANNLQG-KIPLKIGNLRNLEKLDIGDNKLVGIAPIAIFNVSTLK-- 227 (979)
Q Consensus 151 Ls~N~l~~~~~~~~~~~ip~~l~~l~~L~~L~L~~N~l~~-~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~-- 227 (979)
|++|.+++. .|..++++++|++|+|++|.+++ .+|..++++++|++|+|++|+++++.|..+..+++|+
T Consensus 111 L~~n~l~~~--------~~~~~~~l~~L~~L~L~~n~l~~~~lp~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~~ 182 (606)
T 3vq2_A 111 AVETKLASL--------ESFPIGQLITLKKLNVAHNFIHSCKLPAYFSNLTNLVHVDLSYNYIQTITVNDLQFLRENPQV 182 (606)
T ss_dssp CTTSCCCCS--------SSSCCTTCTTCCEEECCSSCCCCCCCCGGGGTCTTCCEEECCSSCCCEECTTTTHHHHHCTTC
T ss_pred ccCCccccc--------cccccCCCCCCCEEeCCCCcccceechHhHhhcCCCCEEEccCCcceecChhhhhhhhccccc
Confidence 999999853 34779999999999999999986 6799999999999999999999999999998888776
Q ss_pred --eeeccCCCCcCCCcccccCCCCCcCEEEccCCccc-cccCcccccCCCCcEEec------------------------
Q 002021 228 --ILGLQDNSLSGCLSSIGYARLPNLEILSLWGNNFS-GTIPRFIFNASKLSILDL------------------------ 280 (979)
Q Consensus 228 --~L~L~~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~-~~~p~~l~~l~~L~~L~L------------------------ 280 (979)
.|++++|.+++..+.. +... +|++|++++|.++ +.+|..+.++++|+.+++
T Consensus 183 l~~L~l~~n~l~~~~~~~-~~~~-~L~~L~L~~n~~~~~~~~~~~~~l~~L~~l~l~~~~~~~~~~l~~~~~~~~~~l~~ 260 (606)
T 3vq2_A 183 NLSLDMSLNPIDFIQDQA-FQGI-KLHELTLRGNFNSSNIMKTCLQNLAGLHVHRLILGEFKDERNLEIFEPSIMEGLCD 260 (606)
T ss_dssp CCEEECTTCCCCEECTTT-TTTC-EEEEEEEESCCSCHHHHHHHHHTTTTCEEEEEEEECCTTSCCCSCCCGGGGTTGGG
T ss_pred cceeeccCCCcceeCccc-ccCc-eeeeeeccCCccchhHHHHHhccccccccccccccccccCCcccccChHHhhhhhh
Confidence 7999999999766543 4444 8999999999987 456777888888887776
Q ss_pred ---------cccccccccCccccccccccceeccccccccccchhhhhhcccCCCCccEEEccCCCCcccCCcccccccc
Q 002021 281 ---------EGNSFSGFIPNTFGNLRNLSWLVLSDNYLTSSTQELSFLSSLSNCKFLKYFDLSYNPLYRILPRTTVGNLS 351 (979)
Q Consensus 281 ---------s~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~ 351 (979)
..|.+++.+|. |..+++|+.|++++|.++.++ .+..+++|++|++++|.+..++. + ..
T Consensus 261 l~l~~l~l~~~~~~~~~~~~-~~~l~~L~~L~l~~~~~~~l~-------~l~~~~~L~~L~l~~n~l~~lp~--~---~l 327 (606)
T 3vq2_A 261 VTIDEFRLTYTNDFSDDIVK-FHCLANVSAMSLAGVSIKYLE-------DVPKHFKWQSLSIIRCQLKQFPT--L---DL 327 (606)
T ss_dssp SEEEEEEECCCTTCCGGGGS-CGGGTTCSEEEEESCCCCCCC-------CCCTTCCCSEEEEESCCCSSCCC--C---CC
T ss_pred ccHhheeccccccccccccc-cccCCCCCEEEecCccchhhh-------hccccccCCEEEcccccCccccc--C---CC
Confidence 55666666666 777888888888888877655 36677788888888888855541 1 23
Q ss_pred ccccEEEccCccccCCCCccccCCCcccEEEecCCCCCchh--HHhhhcCCCCcEEEecCcccCCCccccccCCCCCceE
Q 002021 352 HSLEEFKMSNCNISGGIPEEISNLTNLRTIYLGGNKLNGSI--LITLSKLQKLQDLGLKDNKLEGSIPYDICNLAELYRL 429 (979)
Q Consensus 352 ~~L~~L~L~~n~i~~~~p~~l~~l~~L~~L~L~~N~l~~~~--~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L 429 (979)
++|++|++++|...+.. .+..+++|++|++++|++++.. +..+..+++|++|++++|.+.+ +|..+..+++|+.|
T Consensus 328 ~~L~~L~l~~n~~~~~~--~~~~l~~L~~L~ls~n~l~~~~~~~~~~~~~~~L~~L~L~~n~l~~-~~~~~~~l~~L~~L 404 (606)
T 3vq2_A 328 PFLKSLTLTMNKGSISF--KKVALPSLSYLDLSRNALSFSGCCSYSDLGTNSLRHLDLSFNGAII-MSANFMGLEELQHL 404 (606)
T ss_dssp SSCCEEEEESCSSCEEC--CCCCCTTCCEEECCSSCEEEEEECCHHHHCCSCCCEEECCSCSEEE-ECCCCTTCTTCCEE
T ss_pred CccceeeccCCcCccch--hhccCCCCCEEECcCCccCCCcchhhhhccCCcccEeECCCCcccc-chhhccCCCCCCee
Confidence 57888888888554333 5667888888888888887663 6777888888888888888774 55777788888888
Q ss_pred ecCCCcccccCC-ccccCCCcCceEecCCCcccc-ccccccCcCCCcEEEeccccccC-CCccccccccccceEeccCCc
Q 002021 430 DLDGNKLSGSIP-ACFSNLTSLRIVSLGSNELTS-IPLTFWNLKDILNLNFSSNFLTG-SLPLEIGSLKVLVGIDLSRNN 506 (979)
Q Consensus 430 ~Ls~N~l~~~~~-~~~~~l~~L~~L~L~~N~l~~-lp~~~~~l~~L~~L~ls~N~l~~-~~p~~~~~l~~L~~L~Ls~N~ 506 (979)
++++|++.+..| ..+.++++|++|++++|+++. .|..+..+++|+.|++++|++++ .+|..++.+++|+.|+|++|+
T Consensus 405 ~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~Ls~n~ 484 (606)
T 3vq2_A 405 DFQHSTLKRVTEFSAFLSLEKLLYLDISYTNTKIDFDGIFLGLTSLNTLKMAGNSFKDNTLSNVFANTTNLTFLDLSKCQ 484 (606)
T ss_dssp ECTTSEEESTTTTTTTTTCTTCCEEECTTSCCEECCTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSC
T ss_pred ECCCCccCCccChhhhhccccCCEEECcCCCCCccchhhhcCCCCCCEEECCCCcCCCcchHHhhccCCCCCEEECCCCc
Confidence 888888877766 577788888888888888874 45667778888888888888876 367778888888888888888
Q ss_pred cCcccchhhcCCcccceeecCCccccCCCCCcccccccccccccccccccccCCccccCcc-ccCeEeccCCcccccCCC
Q 002021 507 FSGVIPTEIGGLKNLEYLFLGYNRLQGSIPNSFGDLISLKFLNLSNNNLSGVIPASLEKLS-YLEDLNLSFNQLEGKIPR 585 (979)
Q Consensus 507 l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~-~L~~L~L~~N~l~~~~p~ 585 (979)
+++..|..|.++++|++|+|++|++++.+|..|.++++|++|||++|+|+ .+|..+..++ +|+.|++++|++.|..+.
T Consensus 485 l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~-~~p~~~~~l~~~L~~l~l~~N~~~c~c~~ 563 (606)
T 3vq2_A 485 LEQISWGVFDTLHRLQLLNMSHNNLLFLDSSHYNQLYSLSTLDCSFNRIE-TSKGILQHFPKSLAFFNLTNNSVACICEH 563 (606)
T ss_dssp CCEECTTTTTTCTTCCEEECCSSCCSCEEGGGTTTCTTCCEEECTTSCCC-CEESCGGGSCTTCCEEECCSCCCCCSSTT
T ss_pred CCccChhhhcccccCCEEECCCCcCCCcCHHHccCCCcCCEEECCCCcCc-ccCHhHhhhcccCcEEEccCCCcccCCcc
Confidence 88777788888888888888888888777888888888888888888887 5566677776 588888888888877664
No 9
>1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A*
Probab=100.00 E-value=3.6e-56 Score=546.25 Aligned_cols=504 Identities=23% Similarity=0.253 Sum_probs=382.1
Q ss_pred CcEEEEEecCCCccccCCCCCcCCCCCCeeeccCCcccccCCccccccCcccEEecccccccccCCccccCCCCCcEEEc
Q 002021 72 QRVTVLNISSLNLTGTIPSQLGNLSSLQSLNLSFNRLFGSIPSAIFTTYTLKYVCLRGNQLSGTFPSFISNKSSLQHLDL 151 (979)
Q Consensus 72 ~~v~~l~l~~~~l~g~~~~~l~~l~~L~~L~L~~n~~~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L 151 (979)
.+++.|+|++|.+++..|..++++++|++|+|++|++++..+.+++.+++|++|+|++|++++..|..|+++++|++|||
T Consensus 49 ~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L 128 (680)
T 1ziw_A 49 SQLTSLDVGFNTISKLEPELCQKLPMLKVLNLQHNELSQLSDKTFAFCTNLTELHLMSNSIQKIKNNPFVKQKNLITLDL 128 (680)
T ss_dssp TTCSEEECCSSCCCCCCTTHHHHCTTCCEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCSCTTTTCTTCCEEEC
T ss_pred CcCcEEECCCCccCccCHHHHhcccCcCEEECCCCccCccChhhhccCCCCCEEECCCCccCccChhHccccCCCCEEEC
Confidence 45778888888888777777888888888888888887544456788888888888888888777777888888888888
Q ss_pred cCCccCchhhhhhhccCCcccCCCCccceeeccccccccccccccc--CCCCCCceecCCCeeeecCCccccccC-----
Q 002021 152 SSNALSGEIRANICREIPREFGNLPELELMSLAANNLQGKIPLKIG--NLRNLEKLDIGDNKLVGIAPIAIFNVS----- 224 (979)
Q Consensus 152 s~N~l~~~~~~~~~~~ip~~l~~l~~L~~L~L~~N~l~~~~p~~~~--~l~~L~~L~Ls~N~l~~~~p~~l~~l~----- 224 (979)
++|.+++. .|..++++++|++|++++|.+++..+..++ .+++|++|++++|++++..|..+..++
T Consensus 129 s~n~l~~~--------~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L 200 (680)
T 1ziw_A 129 SHNGLSST--------KLGTQVQLENLQELLLSNNKIQALKSEELDIFANSSLKKLELSSNQIKEFSPGCFHAIGRLFGL 200 (680)
T ss_dssp CSSCCSCC--------CCCSSSCCTTCCEEECCSSCCCCBCHHHHGGGTTCEESEEECTTCCCCCBCTTGGGGSSEECEE
T ss_pred CCCccccc--------CchhhcccccCCEEEccCCcccccCHHHhhccccccccEEECCCCcccccChhhhhhhhhhhhh
Confidence 88887754 456677777777777777777766665543 346777777777777766666554432
Q ss_pred ----------------------ccceeeccCCCCcCCCcccccCCCC--CcCEEEccCCccccccCcccccCCCCcEEec
Q 002021 225 ----------------------TLKILGLQDNSLSGCLSSIGYARLP--NLEILSLWGNNFSGTIPRFIFNASKLSILDL 280 (979)
Q Consensus 225 ----------------------~L~~L~L~~N~l~~~~~~~~~~~l~--~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L 280 (979)
+|+.|++++|.+++..+. .|..++ +|++|+|++|++++..|..+..+++|++|+|
T Consensus 201 ~l~~~~l~~~~~~~~~~~l~~~~L~~L~L~~n~l~~~~~~-~~~~l~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L 279 (680)
T 1ziw_A 201 FLNNVQLGPSLTEKLCLELANTSIRNLSLSNSQLSTTSNT-TFLGLKWTNLTMLDLSYNNLNVVGNDSFAWLPQLEYFFL 279 (680)
T ss_dssp ECTTCCCHHHHHHHHHHHHTTSCCCEEECTTSCCCEECTT-TTGGGGGSCCCEEECTTSCCCEECTTTTTTCTTCCEEEC
T ss_pred hccccccChhhHHHHHHHhhhccccEEEccCCcccccChh-HhhccCcCCCCEEECCCCCcCccCcccccCcccccEeeC
Confidence 334444455544443322 233332 2666666666665555555555566666666
Q ss_pred cccccccccCccccc---------------------------------cccccceeccccccccccchhhhhhcccCCCC
Q 002021 281 EGNSFSGFIPNTFGN---------------------------------LRNLSWLVLSDNYLTSSTQELSFLSSLSNCKF 327 (979)
Q Consensus 281 s~N~l~~~~~~~~~~---------------------------------l~~L~~L~Ls~N~l~~~~~~~~~~~~l~~l~~ 327 (979)
++|.+++..|..|.+ +++|++|++++|.++..+.. .+.++++
T Consensus 280 ~~n~l~~~~~~~~~~l~~L~~L~L~~~~~~~~~~~~~lp~i~~~~~~~l~~L~~L~l~~n~l~~~~~~-----~~~~l~~ 354 (680)
T 1ziw_A 280 EYNNIQHLFSHSLHGLFNVRYLNLKRSFTKQSISLASLPKIDDFSFQWLKCLEHLNMEDNDIPGIKSN-----MFTGLIN 354 (680)
T ss_dssp CSCCBSEECTTTTTTCTTCCEEECTTCBCCC------CCEECTTTTTTCTTCCEEECCSCCBCCCCTT-----TTTTCTT
T ss_pred CCCccCccChhhhcCCCCccEEeccchhhhcccccccccccChhhcccCCCCCEEECCCCccCCCChh-----HhccccC
Confidence 666655555554444 45555555555555544332 2455666
Q ss_pred ccEEEccCCCCc--ccCCccccccccccccEEEccCccccCCCCccccCCCcccEEEecCCCCCchhH-HhhhcCCCCcE
Q 002021 328 LKYFDLSYNPLY--RILPRTTVGNLSHSLEEFKMSNCNISGGIPEEISNLTNLRTIYLGGNKLNGSIL-ITLSKLQKLQD 404 (979)
Q Consensus 328 L~~L~Ls~N~l~--~~~~~~~~~~l~~~L~~L~L~~n~i~~~~p~~l~~l~~L~~L~L~~N~l~~~~~-~~l~~l~~L~~ 404 (979)
|++|++++|.+. .+....+......+|+.|++++|++++..|..+..+++|+.|+|++|++.+.++ ..|..+++|++
T Consensus 355 L~~L~Ls~n~~~~~~l~~~~f~~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~l~~L~~ 434 (680)
T 1ziw_A 355 LKYLSLSNSFTSLRTLTNETFVSLAHSPLHILNLTKNKISKIESDAFSWLGHLEVLDLGLNEIGQELTGQEWRGLENIFE 434 (680)
T ss_dssp CCEEECTTCBSCCCEECTTTTGGGTTSCCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCEEECCSGGGTTCTTCCE
T ss_pred CcEEECCCCchhhhhcchhhhcccccCcCceEECCCCCCCeEChhhhhCCCCCCEEeCCCCcCccccCcccccCcccccE
Confidence 666666666532 222222221112478999999999999999999999999999999999987554 78999999999
Q ss_pred EEecCcccCCCccccccCCCCCceEecCCCccc--ccCCccccCCCcCceEecCCCccccccc-cccCcCCCcEEEeccc
Q 002021 405 LGLKDNKLEGSIPYDICNLAELYRLDLDGNKLS--GSIPACFSNLTSLRIVSLGSNELTSIPL-TFWNLKDILNLNFSSN 481 (979)
Q Consensus 405 L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~--~~~~~~~~~l~~L~~L~L~~N~l~~lp~-~~~~l~~L~~L~ls~N 481 (979)
|++++|++.+..+..|..+++|+.|++++|.+. +..|..|.++++|++|++++|+++.+|. .+..+++|+.|++++|
T Consensus 435 L~Ls~n~l~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~p~~~~~l~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~Ls~N 514 (680)
T 1ziw_A 435 IYLSYNKYLQLTRNSFALVPSLQRLMLRRVALKNVDSSPSPFQPLRNLTILDLSNNNIANINDDMLEGLEKLEILDLQHN 514 (680)
T ss_dssp EECCSCSEEECCTTTTTTCTTCCEEECTTSCCBCTTCSSCTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred EecCCCCcceeChhhhhcCcccccchhccccccccccCCcccccCCCCCEEECCCCCCCcCChhhhccccccCEEeCCCC
Confidence 999999999988999999999999999999997 5788999999999999999999998876 4889999999999999
Q ss_pred cccCCCc--------cccccccccceEeccCCccCcccchhhcCCcccceeecCCccccCCCCCcccccccccccccccc
Q 002021 482 FLTGSLP--------LEIGSLKVLVGIDLSRNNFSGVIPTEIGGLKNLEYLFLGYNRLQGSIPNSFGDLISLKFLNLSNN 553 (979)
Q Consensus 482 ~l~~~~p--------~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N 553 (979)
++++..+ ..+..+++|+.|+|++|+++...+..|.++++|+.|+|++|+|++..+..|.++++|+.|+|++|
T Consensus 515 ~l~~~~~~~~~~~~~~~~~~l~~L~~L~L~~N~l~~i~~~~~~~l~~L~~L~Ls~N~l~~l~~~~~~~l~~L~~L~L~~N 594 (680)
T 1ziw_A 515 NLARLWKHANPGGPIYFLKGLSHLHILNLESNGFDEIPVEVFKDLFELKIIDLGLNNLNTLPASVFNNQVSLKSLNLQKN 594 (680)
T ss_dssp CCGGGGSTTSTTSCCCTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECTTS
T ss_pred CccccchhhccCCcchhhcCCCCCCEEECCCCCCCCCCHHHcccccCcceeECCCCCCCcCCHhHhCCCCCCCEEECCCC
Confidence 9986422 24789999999999999999776678999999999999999999877788999999999999999
Q ss_pred cccccCCcccc-CccccCeEeccCCcccccCCCCCCC
Q 002021 554 NLSGVIPASLE-KLSYLEDLNLSFNQLEGKIPRGGSF 589 (979)
Q Consensus 554 ~l~~~~p~~~~-~l~~L~~L~L~~N~l~~~~p~~~~~ 589 (979)
+|++..|..+. .+++|+.|++++|++.|.++...+|
T Consensus 595 ~l~~~~~~~~~~~~~~L~~l~l~~N~~~c~c~~~~~~ 631 (680)
T 1ziw_A 595 LITSVEKKVFGPAFRNLTELDMRFNPFDCTCESIAWF 631 (680)
T ss_dssp CCCBCCHHHHHHHHTTCSEEECTTCCCCBCCCCCSSE
T ss_pred cCCccChhHhcccccccCEEEccCCCcccCCccHHHH
Confidence 99998888887 7999999999999999998753344
No 10
>3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A*
Probab=100.00 E-value=2.1e-56 Score=540.85 Aligned_cols=510 Identities=22% Similarity=0.266 Sum_probs=451.4
Q ss_pred EEEecCCCccccCCCCCcCCCCCCeeeccCCcccccCCccccccCcccEEecccccccccCCccccCCCCCcEEEccCCc
Q 002021 76 VLNISSLNLTGTIPSQLGNLSSLQSLNLSFNRLFGSIPSAIFTTYTLKYVCLRGNQLSGTFPSFISNKSSLQHLDLSSNA 155 (979)
Q Consensus 76 ~l~l~~~~l~g~~~~~l~~l~~L~~L~L~~n~~~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~N~ 155 (979)
.++.++.+++ .+|..+.. ++++|||++|++++..|.+++.+++|++|+|++|++++..|..|+++++|++|+|++|.
T Consensus 16 ~~~c~~~~l~-~iP~~l~~--~l~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~ 92 (606)
T 3t6q_A 16 TYNCENLGLN-EIPGTLPN--STECLEFSFNVLPTIQNTTFSRLINLTFLDLTRCQIYWIHEDTFQSQHRLDTLVLTANP 92 (606)
T ss_dssp EEECTTSCCS-SCCTTSCT--TCCEEECTTCCCSEECTTTSTTCTTCSEEECTTCCCCEECTTTTTTCTTCCEEECTTCC
T ss_pred eEECCCCCcc-cCcCCCCC--cCcEEEccCCccCcCChhHhccCccceEEECCCCccceeChhhccCccccCeeeCCCCc
Confidence 5788999888 67776654 79999999999999889999999999999999999999999999999999999999999
Q ss_pred cCchhhhhhhccCCcccCCCCccceeecccccccccccccccCCCCCCceecCCCeeeecCCccccccCccceeeccCCC
Q 002021 156 LSGEIRANICREIPREFGNLPELELMSLAANNLQGKIPLKIGNLRNLEKLDIGDNKLVGIAPIAIFNVSTLKILGLQDNS 235 (979)
Q Consensus 156 l~~~~~~~~~~~ip~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~ 235 (979)
+++. .|..|+++++|++|+|++|++++..|..++++++|++|+|++|+++++.+..+..+++|+.|++++|.
T Consensus 93 l~~~--------~~~~~~~l~~L~~L~L~~n~i~~l~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~ 164 (606)
T 3t6q_A 93 LIFM--------AETALSGPKALKHLFFIQTGISSIDFIPLHNQKTLESLYLGSNHISSIKLPKGFPTEKLKVLDFQNNA 164 (606)
T ss_dssp CSEE--------CTTTTSSCTTCCEEECTTSCCSCGGGSCCTTCTTCCEEECCSSCCCCCCCCTTCCCTTCCEEECCSSC
T ss_pred cccc--------ChhhhcccccccEeeccccCcccCCcchhccCCcccEEECCCCcccccCcccccCCcccCEEEcccCc
Confidence 9864 68899999999999999999998878999999999999999999999776667779999999999999
Q ss_pred CcCCCcccccCCCCCcC--EEEccCCccccccCcccccCCCCcEEecccccc--------------------------cc
Q 002021 236 LSGCLSSIGYARLPNLE--ILSLWGNNFSGTIPRFIFNASKLSILDLEGNSF--------------------------SG 287 (979)
Q Consensus 236 l~~~~~~~~~~~l~~L~--~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l--------------------------~~ 287 (979)
+++..+. .|..+++|+ .|++++|.+++..|..+. ..+|++|++++|.. ..
T Consensus 165 l~~~~~~-~~~~l~~L~~l~L~l~~n~l~~~~~~~~~-~~~L~~L~l~~~~~~~~~~~~l~~~~l~~l~~~~~~~~~~~~ 242 (606)
T 3t6q_A 165 IHYLSKE-DMSSLQQATNLSLNLNGNDIAGIEPGAFD-SAVFQSLNFGGTQNLLVIFKGLKNSTIQSLWLGTFEDMDDED 242 (606)
T ss_dssp CCEECHH-HHHTTTTCCSEEEECTTCCCCEECTTTTT-TCEEEEEECTTCSCHHHHHHHTTTCEEEEEECCCCTTSCCCC
T ss_pred ccccChh-hhhhhcccceeEEecCCCccCccChhHhh-hccccccccCCchhHHHHhhhccccchhheechhhccccccc
Confidence 9976543 477899999 999999999987776655 46899999998851 11
Q ss_pred ccCccccccc--cccceeccccccccccchhhhhhcccCCCCccEEEccCCCCcccCCccccccccccccEEEccCcccc
Q 002021 288 FIPNTFGNLR--NLSWLVLSDNYLTSSTQELSFLSSLSNCKFLKYFDLSYNPLYRILPRTTVGNLSHSLEEFKMSNCNIS 365 (979)
Q Consensus 288 ~~~~~~~~l~--~L~~L~Ls~N~l~~~~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~~L~~L~L~~n~i~ 365 (979)
..+..|.++. +|+.|++++|.++.++.. .+..+++|++|++++|++..++.. +.. .++|++|++++|.++
T Consensus 243 i~~~~~~~l~~~~L~~L~l~~n~l~~~~~~-----~~~~l~~L~~L~l~~n~l~~lp~~--l~~-l~~L~~L~l~~n~l~ 314 (606)
T 3t6q_A 243 ISPAVFEGLCEMSVESINLQKHYFFNISSN-----TFHCFSGLQELDLTATHLSELPSG--LVG-LSTLKKLVLSANKFE 314 (606)
T ss_dssp CCGGGGGGGGGSEEEEEECTTCCCSSCCTT-----TTTTCTTCSEEECTTSCCSCCCSS--CCS-CTTCCEEECTTCCCS
T ss_pred cChhHhchhhcCceeEEEeecCccCccCHH-----HhccccCCCEEeccCCccCCCChh--hcc-cccCCEEECccCCcC
Confidence 2233344443 799999999999988764 478899999999999999976443 233 368999999999999
Q ss_pred CCCCccccCCCcccEEEecCCCCCchhH-HhhhcCCCCcEEEecCcccCCCc--cccccCCCCCceEecCCCcccccCCc
Q 002021 366 GGIPEEISNLTNLRTIYLGGNKLNGSIL-ITLSKLQKLQDLGLKDNKLEGSI--PYDICNLAELYRLDLDGNKLSGSIPA 442 (979)
Q Consensus 366 ~~~p~~l~~l~~L~~L~L~~N~l~~~~~-~~l~~l~~L~~L~L~~N~l~~~~--p~~~~~l~~L~~L~Ls~N~l~~~~~~ 442 (979)
+..|..+..+++|++|++++|.+.+..+ ..+..+++|++|++++|.+.+.. +..+..+++|++|++++|++.+..|.
T Consensus 315 ~~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~ 394 (606)
T 3t6q_A 315 NLCQISASNFPSLTHLSIKGNTKRLELGTGCLENLENLRELDLSHDDIETSDCCNLQLRNLSHLQSLNLSYNEPLSLKTE 394 (606)
T ss_dssp BGGGGCGGGCTTCSEEECCSCSSCCBCCSSTTTTCTTCCEEECCSSCCCEEEESTTTTTTCTTCCEEECCSCSCEEECTT
T ss_pred cCchhhhhccCcCCEEECCCCCcccccchhhhhccCcCCEEECCCCccccccCcchhcccCCCCCEEECCCCcCCcCCHH
Confidence 9889999999999999999999985554 56999999999999999999766 77899999999999999999999999
Q ss_pred cccCCCcCceEecCCCccccc-cc-cccCcCCCcEEEeccccccCCCccccccccccceEeccCCccCcc---cchhhcC
Q 002021 443 CFSNLTSLRIVSLGSNELTSI-PL-TFWNLKDILNLNFSSNFLTGSLPLEIGSLKVLVGIDLSRNNFSGV---IPTEIGG 517 (979)
Q Consensus 443 ~~~~l~~L~~L~L~~N~l~~l-p~-~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~---~p~~~~~ 517 (979)
.|..+++|++|++++|+++.. |. .+..+++|+.|++++|.+++..|..++.+++|+.|++++|++++. .+..+..
T Consensus 395 ~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~ 474 (606)
T 3t6q_A 395 AFKECPQLELLDLAFTRLKVKDAQSPFQNLHLLKVLNLSHSLLDISSEQLFDGLPALQHLNLQGNHFPKGNIQKTNSLQT 474 (606)
T ss_dssp TTTTCTTCSEEECTTCCEECCTTCCTTTTCTTCCEEECTTCCCBTTCTTTTTTCTTCCEEECTTCBCGGGEECSSCGGGG
T ss_pred HhcCCccCCeEECCCCcCCCcccchhhhCcccCCEEECCCCccCCcCHHHHhCCCCCCEEECCCCCCCccccccchhhcc
Confidence 999999999999999999965 33 488999999999999999999999999999999999999999873 3367999
Q ss_pred CcccceeecCCccccCCCCCcccccccccccccccccccccCCccccCccccCeEeccCCcccccCCCC-CCCCCccccc
Q 002021 518 LKNLEYLFLGYNRLQGSIPNSFGDLISLKFLNLSNNNLSGVIPASLEKLSYLEDLNLSFNQLEGKIPRG-GSFGNFSAQS 596 (979)
Q Consensus 518 l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~-~~~~~~~~~~ 596 (979)
+++|++|+|++|++++..|..|..+++|++|+|++|++++.+|..+..+++| .|++++|++++.+|.. ..++.+..+.
T Consensus 475 l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L-~L~L~~N~l~~~~~~~~~~l~~L~~L~ 553 (606)
T 3t6q_A 475 LGRLEILVLSFCDLSSIDQHAFTSLKMMNHVDLSHNRLTSSSIEALSHLKGI-YLNLASNHISIILPSLLPILSQQRTIN 553 (606)
T ss_dssp CTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCGGGGGGGTTCCSC-EEECCSSCCCCCCGGGHHHHHTSSEEE
T ss_pred CCCccEEECCCCccCccChhhhccccCCCEEECCCCccCcCChhHhCccccc-EEECcCCcccccCHhhcccCCCCCEEe
Confidence 9999999999999999889999999999999999999999999999999999 9999999999887753 3466778899
Q ss_pred ccCCccccCCC
Q 002021 597 FEGNELLCGSP 607 (979)
Q Consensus 597 ~~~N~~~c~~p 607 (979)
+.+|++.|.++
T Consensus 554 l~~N~~~c~c~ 564 (606)
T 3t6q_A 554 LRQNPLDCTCS 564 (606)
T ss_dssp CTTCCEECSGG
T ss_pred CCCCCccccCC
Confidence 99999999765
No 11
>3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A*
Probab=100.00 E-value=5e-55 Score=528.85 Aligned_cols=502 Identities=22% Similarity=0.227 Sum_probs=436.9
Q ss_pred EEEecCCCccccCCCCCcCCCCCCeeeccCCcccccCCccccccCcccEEecccccccccCCccccCCCCCcEEEccCCc
Q 002021 76 VLNISSLNLTGTIPSQLGNLSSLQSLNLSFNRLFGSIPSAIFTTYTLKYVCLRGNQLSGTFPSFISNKSSLQHLDLSSNA 155 (979)
Q Consensus 76 ~l~l~~~~l~g~~~~~l~~l~~L~~L~L~~n~~~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~N~ 155 (979)
.++.++++++ .+|..+. ++|++|||++|++++..|..+..+++|++|+|++|++++..|..|+++++|++|+|++|.
T Consensus 15 ~~~c~~~~l~-~ip~~~~--~~l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~i~~~~~~~l~~L~~L~Ls~n~ 91 (606)
T 3vq2_A 15 TYQCMDQKLS-KVPDDIP--SSTKNIDLSFNPLKILKSYSFSNFSELQWLDLSRCEIETIEDKAWHGLHHLSNLILTGNP 91 (606)
T ss_dssp EEECTTSCCS-SCCTTSC--TTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCC
T ss_pred ceEccCCCcc-cCCCCCC--CCcCEEECCCCCcCEeChhhccCCccCcEEeCCCCcccccCHHHhhchhhcCEeECCCCc
Confidence 4677888888 5777664 899999999999998888899999999999999999999999999999999999999999
Q ss_pred cCchhhhhhhccCCcccCCCCccceeecccccccccccccccCCCCCCceecCCCeeeec-CCccccccCccceeeccCC
Q 002021 156 LSGEIRANICREIPREFGNLPELELMSLAANNLQGKIPLKIGNLRNLEKLDIGDNKLVGI-APIAIFNVSTLKILGLQDN 234 (979)
Q Consensus 156 l~~~~~~~~~~~ip~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~-~p~~l~~l~~L~~L~L~~N 234 (979)
+++. .|..|+++++|++|+|++|.+++..+..++++++|++|+|++|++.+. .|..|.++++|++|++++|
T Consensus 92 l~~~--------~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~lp~~~~~l~~L~~L~Ls~n 163 (606)
T 3vq2_A 92 IQSF--------SPGSFSGLTSLENLVAVETKLASLESFPIGQLITLKKLNVAHNFIHSCKLPAYFSNLTNLVHVDLSYN 163 (606)
T ss_dssp CCCC--------CTTSSTTCTTCCEEECTTSCCCCSSSSCCTTCTTCCEEECCSSCCCCCCCCGGGGTCTTCCEEECCSS
T ss_pred cccc--------ChhhcCCcccCCEEEccCCccccccccccCCCCCCCEEeCCCCcccceechHhHhhcCCCCEEEccCC
Confidence 9864 588999999999999999999988888999999999999999999974 5999999999999999999
Q ss_pred CCcCCCcccccCCCCCc----CEEEccCCccccccCcccccCCCCcEEeccccccc-cccCccccccccccceeccc---
Q 002021 235 SLSGCLSSIGYARLPNL----EILSLWGNNFSGTIPRFIFNASKLSILDLEGNSFS-GFIPNTFGNLRNLSWLVLSD--- 306 (979)
Q Consensus 235 ~l~~~~~~~~~~~l~~L----~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~-~~~~~~~~~l~~L~~L~Ls~--- 306 (979)
++++..+. .+..+.+| ++|++++|.+++..+..+. ..+|++|++++|.++ +..|..+.++++|+.+++..
T Consensus 164 ~l~~~~~~-~~~~l~~L~~~l~~L~l~~n~l~~~~~~~~~-~~~L~~L~L~~n~~~~~~~~~~~~~l~~L~~l~l~~~~~ 241 (606)
T 3vq2_A 164 YIQTITVN-DLQFLRENPQVNLSLDMSLNPIDFIQDQAFQ-GIKLHELTLRGNFNSSNIMKTCLQNLAGLHVHRLILGEF 241 (606)
T ss_dssp CCCEECTT-TTHHHHHCTTCCCEEECTTCCCCEECTTTTT-TCEEEEEEEESCCSCHHHHHHHHHTTTTCEEEEEEEECC
T ss_pred cceecChh-hhhhhhccccccceeeccCCCcceeCccccc-CceeeeeeccCCccchhHHHHHhcccccccccccccccc
Confidence 99986543 34455544 4899999999966655554 459999999999987 45667778888887777643
Q ss_pred ------------------------------cccccccchhhhhhcccCCCCccEEEccCCCCcccCCccccccccccccE
Q 002021 307 ------------------------------NYLTSSTQELSFLSSLSNCKFLKYFDLSYNPLYRILPRTTVGNLSHSLEE 356 (979)
Q Consensus 307 ------------------------------N~l~~~~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~~L~~ 356 (979)
|.++... ..+..+++|+.|++++|.+..+. .+.. .++|++
T Consensus 242 ~~~~~l~~~~~~~~~~l~~l~l~~l~l~~~~~~~~~~------~~~~~l~~L~~L~l~~~~~~~l~---~l~~-~~~L~~ 311 (606)
T 3vq2_A 242 KDERNLEIFEPSIMEGLCDVTIDEFRLTYTNDFSDDI------VKFHCLANVSAMSLAGVSIKYLE---DVPK-HFKWQS 311 (606)
T ss_dssp TTSCCCSCCCGGGGTTGGGSEEEEEEECCCTTCCGGG------GSCGGGTTCSEEEEESCCCCCCC---CCCT-TCCCSE
T ss_pred ccCCcccccChHHhhhhhhccHhheeccccccccccc------cccccCCCCCEEEecCccchhhh---hccc-cccCCE
Confidence 3333222 23677899999999999998775 2332 358999
Q ss_pred EEccCccccCCCCccccCCCcccEEEecCCCCCchhHHhhhcCCCCcEEEecCcccCCC--ccccccCCCCCceEecCCC
Q 002021 357 FKMSNCNISGGIPEEISNLTNLRTIYLGGNKLNGSILITLSKLQKLQDLGLKDNKLEGS--IPYDICNLAELYRLDLDGN 434 (979)
Q Consensus 357 L~L~~n~i~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~--~p~~~~~l~~L~~L~Ls~N 434 (979)
|++++|.+ +.+| .+ .+++|++|++++|+..+.. .+..+++|++|++++|.+++. .|..+..+++|++|++++|
T Consensus 312 L~l~~n~l-~~lp-~~-~l~~L~~L~l~~n~~~~~~--~~~~l~~L~~L~ls~n~l~~~~~~~~~~~~~~~L~~L~L~~n 386 (606)
T 3vq2_A 312 LSIIRCQL-KQFP-TL-DLPFLKSLTLTMNKGSISF--KKVALPSLSYLDLSRNALSFSGCCSYSDLGTNSLRHLDLSFN 386 (606)
T ss_dssp EEEESCCC-SSCC-CC-CCSSCCEEEEESCSSCEEC--CCCCCTTCCEEECCSSCEEEEEECCHHHHCCSCCCEEECCSC
T ss_pred EEcccccC-cccc-cC-CCCccceeeccCCcCccch--hhccCCCCCEEECcCCccCCCcchhhhhccCCcccEeECCCC
Confidence 99999999 5777 55 9999999999999765544 778999999999999999876 3788999999999999999
Q ss_pred cccccCCccccCCCcCceEecCCCccccccc--cccCcCCCcEEEeccccccCCCccccccccccceEeccCCccCc-cc
Q 002021 435 KLSGSIPACFSNLTSLRIVSLGSNELTSIPL--TFWNLKDILNLNFSSNFLTGSLPLEIGSLKVLVGIDLSRNNFSG-VI 511 (979)
Q Consensus 435 ~l~~~~~~~~~~l~~L~~L~L~~N~l~~lp~--~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~-~~ 511 (979)
.+.+ +|..+..+++|++|++++|+++.++. .+..+++|+.|++++|.+++..|..++.+++|+.|++++|++++ .+
T Consensus 387 ~l~~-~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~ 465 (606)
T 3vq2_A 387 GAII-MSANFMGLEELQHLDFQHSTLKRVTEFSAFLSLEKLLYLDISYTNTKIDFDGIFLGLTSLNTLKMAGNSFKDNTL 465 (606)
T ss_dssp SEEE-ECCCCTTCTTCCEEECTTSEEESTTTTTTTTTCTTCCEEECTTSCCEECCTTTTTTCTTCCEEECTTCEEGGGEE
T ss_pred cccc-chhhccCCCCCCeeECCCCccCCccChhhhhccccCCEEECcCCCCCccchhhhcCCCCCCEEECCCCcCCCcch
Confidence 9985 66899999999999999999997754 78899999999999999999999999999999999999999998 47
Q ss_pred chhhcCCcccceeecCCccccCCCCCcccccccccccccccccccccCCccccCccccCeEeccCCcccccCCCC-CCCC
Q 002021 512 PTEIGGLKNLEYLFLGYNRLQGSIPNSFGDLISLKFLNLSNNNLSGVIPASLEKLSYLEDLNLSFNQLEGKIPRG-GSFG 590 (979)
Q Consensus 512 p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~-~~~~ 590 (979)
|..|+.+++|+.|+|++|++++..|..|.++++|++|+|++|++++.+|..+..+++|+.|+|++|+++. +|.. ..++
T Consensus 466 ~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~-~p~~~~~l~ 544 (606)
T 3vq2_A 466 SNVFANTTNLTFLDLSKCQLEQISWGVFDTLHRLQLLNMSHNNLLFLDSSHYNQLYSLSTLDCSFNRIET-SKGILQHFP 544 (606)
T ss_dssp CSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSCEEGGGTTTCTTCCEEECTTSCCCC-EESCGGGSC
T ss_pred HHhhccCCCCCEEECCCCcCCccChhhhcccccCCEEECCCCcCCCcCHHHccCCCcCCEEECCCCcCcc-cCHhHhhhc
Confidence 9999999999999999999999999999999999999999999999999999999999999999999995 5543 3444
Q ss_pred -CcccccccCCccccCCC
Q 002021 591 -NFSAQSFEGNELLCGSP 607 (979)
Q Consensus 591 -~~~~~~~~~N~~~c~~p 607 (979)
.+..+.+.+|++.|+++
T Consensus 545 ~~L~~l~l~~N~~~c~c~ 562 (606)
T 3vq2_A 545 KSLAFFNLTNNSVACICE 562 (606)
T ss_dssp TTCCEEECCSCCCCCSST
T ss_pred ccCcEEEccCCCcccCCc
Confidence 47888999999999877
No 12
>2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A*
Probab=100.00 E-value=1e-52 Score=502.34 Aligned_cols=494 Identities=23% Similarity=0.253 Sum_probs=316.1
Q ss_pred CCccceeEeeCCCCcEEEEEecCCCccccCCCCCcCCCCCCeeeccCCcccccCCccccccCcccEEecccccccccCCc
Q 002021 59 VCNWTGVACEVHSQRVTVLNISSLNLTGTIPSQLGNLSSLQSLNLSFNRLFGSIPSAIFTTYTLKYVCLRGNQLSGTFPS 138 (979)
Q Consensus 59 ~c~w~gv~c~~~~~~v~~l~l~~~~l~g~~~~~l~~l~~L~~L~L~~n~~~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~ 138 (979)
.|.|.|| |+. ++++++ .+|+.+. ++|++|||++|++++..|.++..+++|++|+|++|++++..|.
T Consensus 3 ~C~~~~~-c~~----------~~~~l~-~ip~~~~--~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~ 68 (549)
T 2z81_A 3 SCDASGV-CDG----------RSRSFT-SIPSGLT--AAMKSLDLSFNKITYIGHGDLRACANLQVLILKSSRINTIEGD 68 (549)
T ss_dssp EECTTSE-EEC----------TTSCCS-SCCSCCC--TTCCEEECCSSCCCEECSSTTSSCTTCCEEECTTSCCCEECTT
T ss_pred cCCCCce-EEC----------CCCccc-cccccCC--CCccEEECcCCccCccChhhhhcCCcccEEECCCCCcCccChh
Confidence 4999999 863 334444 3444432 4556666666665555555555566666666666666555555
Q ss_pred cccCCCCCcEEEccCCccCchhhhhhhccCCcccCCCCccceeecccccccc-cccccccCCCCCCceecCCCe-eeecC
Q 002021 139 FISNKSSLQHLDLSSNALSGEIRANICREIPREFGNLPELELMSLAANNLQG-KIPLKIGNLRNLEKLDIGDNK-LVGIA 216 (979)
Q Consensus 139 ~l~~l~~L~~L~Ls~N~l~~~~~~~~~~~ip~~l~~l~~L~~L~L~~N~l~~-~~p~~~~~l~~L~~L~Ls~N~-l~~~~ 216 (979)
.|+++++|++|||++|.+++. .|..|+++++|++|+|++|.+++ ..|..++++++|++|++++|+ +..+.
T Consensus 69 ~~~~l~~L~~L~Ls~n~l~~~--------~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~l~~L~~L~L~~n~~~~~~~ 140 (549)
T 2z81_A 69 AFYSLGSLEHLDLSDNHLSSL--------SSSWFGPLSSLKYLNLMGNPYQTLGVTSLFPNLTNLQTLRIGNVETFSEIR 140 (549)
T ss_dssp TTTTCTTCCEEECTTSCCCSC--------CHHHHTTCTTCCEEECTTCCCSSSCSSCSCTTCTTCCEEEEEESSSCCEEC
T ss_pred hccccccCCEEECCCCccCcc--------CHHHhccCCCCcEEECCCCcccccchhhhhhccCCccEEECCCCccccccC
Confidence 555666666666666655532 22335555666666666665554 234455555666666666555 33443
Q ss_pred CccccccCccceeeccCCCCcCCCcccccCCCCCcCEEEccCCccccccCcccccCCCCcEEecccccccccc--C-ccc
Q 002021 217 PIAIFNVSTLKILGLQDNSLSGCLSSIGYARLPNLEILSLWGNNFSGTIPRFIFNASKLSILDLEGNSFSGFI--P-NTF 293 (979)
Q Consensus 217 p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~--~-~~~ 293 (979)
+..|.++++|++|++++|++++..+. .+..+++|++|++++|.+....+..+..+++|++|++++|++++.. | ...
T Consensus 141 ~~~~~~l~~L~~L~L~~n~l~~~~~~-~l~~l~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~ 219 (549)
T 2z81_A 141 RIDFAGLTSLNELEIKALSLRNYQSQ-SLKSIRDIHHLTLHLSESAFLLEIFADILSSVRYLELRDTNLARFQFSPLPVD 219 (549)
T ss_dssp TTTTTTCCEEEEEEEEETTCCEECTT-TTTTCSEEEEEEEECSBSTTHHHHHHHSTTTBSEEEEESCBCTTCCCCCCSSC
T ss_pred HhhhhcccccCeeeccCCcccccChh-hhhccccCceEecccCcccccchhhHhhcccccEEEccCCccccccccccchh
Confidence 44555556666666666655543332 3445555666666665554222222234556666666666655431 1 122
Q ss_pred cccccccceeccccccccccchhhhhhcccCCCCccEEEccCCCCcccCCccc----cccccccccEEEccCccccCC--
Q 002021 294 GNLRNLSWLVLSDNYLTSSTQELSFLSSLSNCKFLKYFDLSYNPLYRILPRTT----VGNLSHSLEEFKMSNCNISGG-- 367 (979)
Q Consensus 294 ~~l~~L~~L~Ls~N~l~~~~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~~~~~----~~~l~~~L~~L~L~~n~i~~~-- 367 (979)
..+++|+.|++++|.+++.... .....+..+++|+.+++++|.+.++..... ......+|+.|++.++.+...
T Consensus 220 ~~~~~L~~L~l~~n~l~~~~~~-~l~~~~~~~~~L~~l~l~~~~~~~~~~~~~~~~~~~~~l~~L~~L~l~~~~i~~~~~ 298 (549)
T 2z81_A 220 EVSSPMKKLAFRGSVLTDESFN-ELLKLLRYILELSEVEFDDCTLNGLGDFNPSESDVVSELGKVETVTIRRLHIPQFYL 298 (549)
T ss_dssp CCCCCCCEEEEESCEEEHHHHH-HHHGGGGGCTTCCEEEEESCEEECCSCCCCCTTTCCCCCTTCCEEEEESCBCSCGGG
T ss_pred hhhhcccceeccccccchhHHH-HHHHHhhhhccccccccccccccccccccccchhhhhhhcccccccccccccchhhh
Confidence 3345566666666655543221 122234455566666666665544321100 001123566666666655431
Q ss_pred ---CCccccCCCcccEEEecCCCCCchhHHhhhcCCCCcEEEecCcccCCCccc---cccCCCCCceEecCCCcccccCC
Q 002021 368 ---IPEEISNLTNLRTIYLGGNKLNGSILITLSKLQKLQDLGLKDNKLEGSIPY---DICNLAELYRLDLDGNKLSGSIP 441 (979)
Q Consensus 368 ---~p~~l~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~---~~~~l~~L~~L~Ls~N~l~~~~~ 441 (979)
++..+...++|+.|++++|++...+...+..+++|++|++++|++.+.+|. .++.+++|+.|++++|++++..+
T Consensus 299 ~~~l~~~~~~~~~L~~L~l~~n~l~~ip~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~ 378 (549)
T 2z81_A 299 FYDLSTVYSLLEKVKRITVENSKVFLVPCSFSQHLKSLEFLDLSENLMVEEYLKNSACKGAWPSLQTLVLSQNHLRSMQK 378 (549)
T ss_dssp SCCCCHHHHHSTTCCEEEEESSCCCCCCHHHHHHCTTCCEEECCSSCCCHHHHHHHTCTTSSTTCCEEECTTSCCCCHHH
T ss_pred cccchhhhhhcccceEEEeccCccccCCHHHHhcCccccEEEccCCccccccccchhhhhccccCcEEEccCCccccccc
Confidence 122233456788888888888755555556788888888888888876543 36778888888888888876533
Q ss_pred --ccccCCCcCceEecCCCccccccccccCcCCCcEEEeccccccCCCccccccccccceEeccCCccCcccchhhcCCc
Q 002021 442 --ACFSNLTSLRIVSLGSNELTSIPLTFWNLKDILNLNFSSNFLTGSLPLEIGSLKVLVGIDLSRNNFSGVIPTEIGGLK 519 (979)
Q Consensus 442 --~~~~~l~~L~~L~L~~N~l~~lp~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~ 519 (979)
..+..+++|++|++++|+++.+|..+..+++|+.|++++|++++ +|..+. ++|+.|||++|++++.+ ..++
T Consensus 379 ~~~~~~~l~~L~~L~Ls~N~l~~lp~~~~~~~~L~~L~Ls~N~l~~-l~~~~~--~~L~~L~Ls~N~l~~~~----~~l~ 451 (549)
T 2z81_A 379 TGEILLTLKNLTSLDISRNTFHPMPDSCQWPEKMRFLNLSSTGIRV-VKTCIP--QTLEVLDVSNNNLDSFS----LFLP 451 (549)
T ss_dssp HHHHGGGCTTCCEEECTTCCCCCCCSCCCCCTTCCEEECTTSCCSC-CCTTSC--TTCSEEECCSSCCSCCC----CCCT
T ss_pred chhhhhcCCCCCEEECCCCCCccCChhhcccccccEEECCCCCccc-ccchhc--CCceEEECCCCChhhhc----ccCC
Confidence 45788888888888888888888888888888889999888874 343332 58999999999998753 5789
Q ss_pred ccceeecCCccccCCCCCcccccccccccccccccccccCCccccCccccCeEeccCCcccccCCC
Q 002021 520 NLEYLFLGYNRLQGSIPNSFGDLISLKFLNLSNNNLSGVIPASLEKLSYLEDLNLSFNQLEGKIPR 585 (979)
Q Consensus 520 ~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~ 585 (979)
+|++|+|++|+|+ .+|. ...+++|++|||++|++++.+|..+..+++|+.|++++|+++|.+|.
T Consensus 452 ~L~~L~Ls~N~l~-~ip~-~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~~~ 515 (549)
T 2z81_A 452 RLQELYISRNKLK-TLPD-ASLFPVLLVMKISRNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCPR 515 (549)
T ss_dssp TCCEEECCSSCCS-SCCC-GGGCTTCCEEECCSSCCCCCCTTGGGGCTTCCEEECCSSCBCCCHHH
T ss_pred hhcEEECCCCccC-cCCC-cccCccCCEEecCCCccCCcCHHHHhcCcccCEEEecCCCccCCCcc
Confidence 9999999999999 6776 57899999999999999999888899999999999999999998884
No 13
>3j0a_A TOLL-like receptor 5; membrane protein, leucine-rich repeat, asymmetric homodimer, glycoprotein, immune system; HET: NAG FUC; 26.00A {Homo sapiens}
Probab=100.00 E-value=1.9e-50 Score=505.12 Aligned_cols=503 Identities=23% Similarity=0.238 Sum_probs=429.4
Q ss_pred EEEecCCCccccCCCCCcCCCCCCeeeccCCcccccCCccccccCcccEEecccccccccC-CccccCCCCCcEEEccCC
Q 002021 76 VLNISSLNLTGTIPSQLGNLSSLQSLNLSFNRLFGSIPSAIFTTYTLKYVCLRGNQLSGTF-PSFISNKSSLQHLDLSSN 154 (979)
Q Consensus 76 ~l~l~~~~l~g~~~~~l~~l~~L~~L~L~~n~~~~~~p~~~~~l~~L~~L~L~~n~l~~~~-p~~l~~l~~L~~L~Ls~N 154 (979)
..|.++++++. +|. -.++|++|||++|++++..|..+..+++|++|+|++|...+.+ |..|+++++|++|+|++|
T Consensus 8 ~~dcs~~~L~~-vP~---lp~~l~~LdLs~N~i~~i~~~~~~~l~~L~~LdLs~n~~~~~i~~~~f~~L~~L~~L~Ls~N 83 (844)
T 3j0a_A 8 IAFYRFCNLTQ-VPQ---VLNTTERLLLSFNYIRTVTASSFPFLEQLQLLELGSQYTPLTIDKEAFRNLPNLRILDLGSS 83 (844)
T ss_dssp EEEESCCCSSC-CCS---SCTTCCEEEEESCCCCEECSSSCSSCCSCSEEEECTTCCCCEECTTTTSSCTTCCEEECTTC
T ss_pred EEEccCCCCCC-CCC---CCCCcCEEECCCCcCCccChhHCcccccCeEEeCCCCCCccccCHHHhcCCCCCCEEECCCC
Confidence 45677888984 565 4689999999999999999999999999999999999777666 788999999999999999
Q ss_pred ccCchhhhhhhccCCcccCCCCccceeeccccccccccccc--ccCCCCCCceecCCCeeeecCC-ccccccCccceeec
Q 002021 155 ALSGEIRANICREIPREFGNLPELELMSLAANNLQGKIPLK--IGNLRNLEKLDIGDNKLVGIAP-IAIFNVSTLKILGL 231 (979)
Q Consensus 155 ~l~~~~~~~~~~~ip~~l~~l~~L~~L~L~~N~l~~~~p~~--~~~l~~L~~L~Ls~N~l~~~~p-~~l~~l~~L~~L~L 231 (979)
.+++. .|..|+++++|++|+|++|.+++.+|.. ++++++|++|+|++|++++..+ ..|.++++|+.|+|
T Consensus 84 ~l~~~--------~p~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~~L~~L~~L~Ls~N~l~~~~~~~~~~~L~~L~~L~L 155 (844)
T 3j0a_A 84 KIYFL--------HPDAFQGLFHLFELRLYFCGLSDAVLKDGYFRNLKALTRLDLSKNQIRSLYLHPSFGKLNSLKSIDF 155 (844)
T ss_dssp CCCEE--------CTTSSCSCSSCCCEECTTCCCSSCCSTTCCCSSCSSCCEEEEESCCCCCCCCCGGGGTCSSCCEEEE
T ss_pred cCccc--------CHhHccCCcccCEeeCcCCCCCcccccCccccccCCCCEEECCCCcccccccchhHhhCCCCCEEEC
Confidence 99864 6899999999999999999999877665 9999999999999999998865 57999999999999
Q ss_pred cCCCCcCCCcccccCCC--CCcCEEEccCCccccccCcccccCCC------CcEEeccccccccccCcccccc---cccc
Q 002021 232 QDNSLSGCLSSIGYARL--PNLEILSLWGNNFSGTIPRFIFNASK------LSILDLEGNSFSGFIPNTFGNL---RNLS 300 (979)
Q Consensus 232 ~~N~l~~~~~~~~~~~l--~~L~~L~L~~N~l~~~~p~~l~~l~~------L~~L~Ls~N~l~~~~~~~~~~l---~~L~ 300 (979)
++|.+++..+. .+..+ ++|+.|+|++|.+.+..|..+..+.+ |++|++++|.+++..+..+... .+++
T Consensus 156 s~N~i~~~~~~-~l~~l~~~~L~~L~L~~n~l~~~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~~l~~~~l~ 234 (844)
T 3j0a_A 156 SSNQIFLVCEH-ELEPLQGKTLSFFSLAANSLYSRVSVDWGKCMNPFRNMVLEILDVSGNGWTVDITGNFSNAISKSQAF 234 (844)
T ss_dssp ESSCCCCCCSG-GGHHHHHCSSCCCEECCSBSCCCCCCCCCSSSCTTTTCCBSEEBCSSCCSSTTTTSGGGGTSCSCCBS
T ss_pred CCCcCCeeCHH-HcccccCCccceEECCCCccccccccchhhcCCccccCceeEEecCCCcCchhHHHHHHhhcCccccc
Confidence 99999876544 34555 89999999999999988887777665 9999999999998888877654 5788
Q ss_pred ceecccccc---------ccccchhhhhhcccCC--CCccEEEccCCCCcccCCccccccccccccEEEccCccccCCCC
Q 002021 301 WLVLSDNYL---------TSSTQELSFLSSLSNC--KFLKYFDLSYNPLYRILPRTTVGNLSHSLEEFKMSNCNISGGIP 369 (979)
Q Consensus 301 ~L~Ls~N~l---------~~~~~~~~~~~~l~~l--~~L~~L~Ls~N~l~~~~~~~~~~~l~~~L~~L~L~~n~i~~~~p 369 (979)
.|.++.+.+ ..... ..+..+ ++|++|++++|.+..+.+..+ .. .++|+.|+|++|+|++..|
T Consensus 235 ~L~l~~~~~~~~~~~~~l~~~~~-----~~f~~l~~~~L~~L~Ls~n~l~~~~~~~~-~~-l~~L~~L~L~~n~i~~~~~ 307 (844)
T 3j0a_A 235 SLILAHHIMGAGFGFHNIKDPDQ-----NTFAGLARSSVRHLDLSHGFVFSLNSRVF-ET-LKDLKVLNLAYNKINKIAD 307 (844)
T ss_dssp EEECCSSCCBCSSSCSSSTTGGG-----TTTTTTTTSCCCEEECTTCCCCEECSCCS-SS-CCCCCEEEEESCCCCEECT
T ss_pred ceecccccccccccccccCCCCh-----hhhhccccCCccEEECCCCcccccChhhh-hc-CCCCCEEECCCCcCCCCCh
Confidence 888874433 22221 123343 789999999999988765543 22 4689999999999999999
Q ss_pred ccccCCCcccEEEecCCCCCchhHHhhhcCCCCcEEEecCcccCCCccccccCCCCCceEecCCCcccccCCccccCCCc
Q 002021 370 EEISNLTNLRTIYLGGNKLNGSILITLSKLQKLQDLGLKDNKLEGSIPYDICNLAELYRLDLDGNKLSGSIPACFSNLTS 449 (979)
Q Consensus 370 ~~l~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~ 449 (979)
..|..+++|++|+|++|++++..+..|..+++|+.|++++|.+.+..+..|..+++|+.|+|++|.+++. ..+++
T Consensus 308 ~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~i-----~~~~~ 382 (844)
T 3j0a_A 308 EAFYGLDNLQVLNLSYNLLGELYSSNFYGLPKVAYIDLQKNHIAIIQDQTFKFLEKLQTLDLRDNALTTI-----HFIPS 382 (844)
T ss_dssp TTTTTCSSCCEEEEESCCCSCCCSCSCSSCTTCCEEECCSCCCCCCCSSCSCSCCCCCEEEEETCCSCCC-----SSCCS
T ss_pred HHhcCCCCCCEEECCCCCCCccCHHHhcCCCCCCEEECCCCCCCccChhhhcCCCCCCEEECCCCCCCcc-----cCCCC
Confidence 9999999999999999999999899999999999999999999988888899999999999999999843 33889
Q ss_pred CceEecCCCccccccccccCcCCCcEEEeccccccCCC-ccccccccccceEeccCCccCcccch-hhcCCcccceeecC
Q 002021 450 LRIVSLGSNELTSIPLTFWNLKDILNLNFSSNFLTGSL-PLEIGSLKVLVGIDLSRNNFSGVIPT-EIGGLKNLEYLFLG 527 (979)
Q Consensus 450 L~~L~L~~N~l~~lp~~~~~l~~L~~L~ls~N~l~~~~-p~~~~~l~~L~~L~Ls~N~l~~~~p~-~~~~l~~L~~L~Ls 527 (979)
|+.|++++|+++.+|.. ..+++.|++++|++++.. +..+..+++|+.|+|++|++++..+. .+..+++|+.|+|+
T Consensus 383 L~~L~l~~N~l~~l~~~---~~~l~~L~ls~N~l~~l~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~L~~L~Ls 459 (844)
T 3j0a_A 383 IPDIFLSGNKLVTLPKI---NLTANLIHLSENRLENLDILYFLLRVPHLQILILNQNRFSSCSGDQTPSENPSLEQLFLG 459 (844)
T ss_dssp CSEEEEESCCCCCCCCC---CTTCCEEECCSCCCCSSTTHHHHTTCTTCCEEEEESCCCCCCCSSSSSCSCTTCCBCEEE
T ss_pred cchhccCCCCccccccc---ccccceeecccCccccCchhhhhhcCCccceeeCCCCcccccccccccccCCccccccCC
Confidence 99999999999998865 467899999999999743 33466899999999999999976554 46678999999999
Q ss_pred Ccccc-----CCCCCcccccccccccccccccccccCCccccCccccCeEeccCCcccccCCCCCCCCCcccccccCCcc
Q 002021 528 YNRLQ-----GSIPNSFGDLISLKFLNLSNNNLSGVIPASLEKLSYLEDLNLSFNQLEGKIPRGGSFGNFSAQSFEGNEL 602 (979)
Q Consensus 528 ~N~l~-----~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~~~~~~~~~~N~~ 602 (979)
+|.++ +..+..|.++++|+.|+|++|+|++.+|..|..+++|+.|+|++|+|++.+|.... +++..+.+++|..
T Consensus 460 ~N~l~~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~~~-~~L~~L~Ls~N~l 538 (844)
T 3j0a_A 460 ENMLQLAWETELCWDVFEGLSHLQVLYLNHNYLNSLPPGVFSHLTALRGLSLNSNRLTVLSHNDLP-ANLEILDISRNQL 538 (844)
T ss_dssp SCCCSSSCCSCCCSSCSSCBCCEECCCCCHHHHTTCCTTSSSSCCSCSEEEEESCCCSSCCCCCCC-SCCCEEEEEEECC
T ss_pred CCccccccccccchhhhcCcccccEEECCCCcccccChhHccchhhhheeECCCCCCCccChhhhh-ccccEEECCCCcC
Confidence 99997 44567799999999999999999999999999999999999999999986665433 7788888999976
Q ss_pred ccCCC
Q 002021 603 LCGSP 607 (979)
Q Consensus 603 ~c~~p 607 (979)
..-.|
T Consensus 539 ~~~~~ 543 (844)
T 3j0a_A 539 LAPNP 543 (844)
T ss_dssp CCCCS
T ss_pred CCCCh
Confidence 54444
No 14
>4asz_A BDNF/NT-3 growth factors receptor; transferase, TRKA, TRKB; 1.70A {Homo sapiens} PDB: 4at3_A* 4at4_A* 4at5_A* 3v5q_A*
Probab=100.00 E-value=9e-53 Score=454.90 Aligned_cols=260 Identities=28% Similarity=0.457 Sum_probs=217.3
Q ss_pred CCCCCCceeeeecceEEEEEEcC------CCcEEEEEEeccccccchhcHHHHHHHHHhcCCCCeeeEEEeeccCCeeEE
Q 002021 682 DGFSENNLIGRGGFGSVYKASLG------DGMEVAVKVFTSQCGRAFKSFDVECEIMKSIRHRNLIKVISSCSNEEFKAL 755 (979)
Q Consensus 682 ~~~~~~~~lG~G~~g~Vy~~~~~------~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 755 (979)
++|.+.+.||+|+||+||+|++. +++.||||+++.......++|.+|+++|++++|||||+++++|.+++..++
T Consensus 13 ~~~~l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~~~~~~l 92 (299)
T 4asz_A 13 HNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQHEHIVKFYGVCVEGDPLIM 92 (299)
T ss_dssp GGEEEEEEEEC--CCCEEEEEECSCC----CEEEEEEEECSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSEEE
T ss_pred HHeEEeeEEeeCCCcEEEEEEECCcccCCCCEEEEEEEeCCCChHHHHHHHHHHHHHHhCCCCCCccEEEEEeeCCEEEE
Confidence 46777899999999999999753 478899999987665667889999999999999999999999999999999
Q ss_pred EEEecCCCccceeeccC------------CCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCEEeCCCCcEEE
Q 002021 756 VLEYMPHGSLEKYLYSS------------NCILDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHL 823 (979)
Q Consensus 756 v~E~~~~g~L~~~l~~~------------~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~i~H~Dik~~NIll~~~~~~kl 823 (979)
|||||++|+|.++++.. ...+++.++++|+.|||+||+||| +++|+||||||+|||+++++.+||
T Consensus 93 V~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH---~~~iiHRDlKp~NILl~~~~~~Ki 169 (299)
T 4asz_A 93 VFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQIAAGMVYLA---SQHFVHRDLATRNCLVGENLLVKI 169 (299)
T ss_dssp EEECCTTCBHHHHHHHTSHHHHHC----CCCCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEECGGGCEEE
T ss_pred EEEcCCCCcHHHHHHhcCcccccccccCCCCCCCHHHHHHHHHHHHHHHHHHH---hCCcccCccCHhhEEECCCCcEEE
Confidence 99999999999999753 246999999999999999999999 899999999999999999999999
Q ss_pred EeeccccccCCCCCcceecccccCCCCCCccccCCCCCCCchhHHHHHHHHHHHHc-CCCCCcccccCcchHhHhhhhhc
Q 002021 824 SDFSIAKMLTGEDQSMIQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFT-GKKPTDEIFNGEMTLKHWVNDWL 902 (979)
Q Consensus 824 ~Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~t-g~~P~~~~~~~~~~~~~~~~~~~ 902 (979)
+|||+|+.....+.........||+.|||||++.++.|+.++|||||||++|||+| |+.||...... .....+...
T Consensus 170 ~DFGla~~~~~~~~~~~~~~~~gt~~ymAPE~~~~~~~~~k~DVwS~Gvvl~Ellt~G~~Pf~~~~~~--~~~~~i~~~- 246 (299)
T 4asz_A 170 GDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQPWYQLSNN--EVIECITQG- 246 (299)
T ss_dssp CCCSCHHHHTGGGCEEETTTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCHH--HHHHHHHHT-
T ss_pred CCcccceecCCCCceeecCceecChhhcCHHHHcCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCHH--HHHHHHHcC-
Confidence 99999987654444433445679999999999999999999999999999999999 89999763221 111111100
Q ss_pred CCccchhhcccccCchhhhhHHHHHHHHHHHHHHHhccccCcCCCCCHHHHHHHHHHhHHhh
Q 002021 903 PISTMEVVDANLLSQEDIHFVAKEQCVSFVFNLAMECTMEFPKQRINAKEIVTKLLKIRDSL 964 (979)
Q Consensus 903 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~eil~~L~~~~~~~ 964 (979)
.....+..+++++.+++.+||+.||++|||++||++.|+++.++.
T Consensus 247 -----------------~~~~~p~~~~~~~~~li~~cl~~dP~~RPs~~~i~~~L~~~~~~~ 291 (299)
T 4asz_A 247 -----------------RVLQRPRTCPQEVYELMLGCWQREPHMRKNIKGIHTLLQNLAKAS 291 (299)
T ss_dssp -----------------CCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHS
T ss_pred -----------------CCCCCCccchHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHhcC
Confidence 011123456788999999999999999999999999999988653
No 15
>4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens}
Probab=100.00 E-value=3.2e-52 Score=457.00 Aligned_cols=259 Identities=27% Similarity=0.461 Sum_probs=209.1
Q ss_pred CCCCCCceeeeecceEEEEEEcC------CCcEEEEEEeccccccchhcHHHHHHHHHhcCCCCeeeEEEeeccCCeeEE
Q 002021 682 DGFSENNLIGRGGFGSVYKASLG------DGMEVAVKVFTSQCGRAFKSFDVECEIMKSIRHRNLIKVISSCSNEEFKAL 755 (979)
Q Consensus 682 ~~~~~~~~lG~G~~g~Vy~~~~~------~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 755 (979)
++|...+.||+|+||+||+|++. +++.||||+++.......+.|.+|+++|++++|||||+++++|.+++..++
T Consensus 41 ~d~~l~~~LG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~~~~~~l 120 (329)
T 4aoj_A 41 RDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRFFGVCTEGRPLLM 120 (329)
T ss_dssp GGEEEEEEEEECSSEEEEEEEESSSCC---CEEEEEEEESCCSHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSEEE
T ss_pred HHeEEEEEEccCCCcEEEEEEECCcccCCCCeEEEEEEECcCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEE
Confidence 45667789999999999999753 478999999987655567889999999999999999999999999999999
Q ss_pred EEEecCCCccceeeccC--------------CCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCEEeCCCCcE
Q 002021 756 VLEYMPHGSLEKYLYSS--------------NCILDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVA 821 (979)
Q Consensus 756 v~E~~~~g~L~~~l~~~--------------~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~i~H~Dik~~NIll~~~~~~ 821 (979)
|||||++|+|.++++.. ...+++.+++.|+.|||+||+||| +++|+||||||+|||+++++.+
T Consensus 121 V~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH---~~~iiHRDLKp~NILl~~~~~~ 197 (329)
T 4aoj_A 121 VFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYLA---GLHFVHRDLATRNCLVGQGLVV 197 (329)
T ss_dssp EEECCTTCBHHHHHHTSSCC-----------CCSCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEEETTTEE
T ss_pred EEEcCCCCcHHHHHHhcCcccccccccccccCCCCCHHHHHHHHHHHHHHHHHHh---cCCeecccccHhhEEECCCCcE
Confidence 99999999999998754 235899999999999999999999 8999999999999999999999
Q ss_pred EEEeeccccccCCCCCcceecccccCCCCCCccccCCCCCCCchhHHHHHHHHHHHHc-CCCCCcccccCcchHhHhhhh
Q 002021 822 HLSDFSIAKMLTGEDQSMIQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFT-GKKPTDEIFNGEMTLKHWVND 900 (979)
Q Consensus 822 kl~Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~t-g~~P~~~~~~~~~~~~~~~~~ 900 (979)
||+|||+++.....+.........||+.|||||++.+..|+.++|||||||++|||+| |+.||......+ ....+..
T Consensus 198 Ki~DFGla~~~~~~~~~~~~~~~~gt~~ymAPE~~~~~~~~~~sDvwS~Gvvl~Ellt~G~~Pf~~~~~~~--~~~~i~~ 275 (329)
T 4aoj_A 198 KIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQPWYQLSNTE--AIDCITQ 275 (329)
T ss_dssp EECCCC----------------CCCCGGGCCHHHHTTCCCCHHHHHHHHHHHHHHHHTTSCCTTCSSCHHH--HHHHHHH
T ss_pred EEcccccceeccCCCcceecCcccccccccChhhhcCCCCCccccccchHHHHHHHHcCCCCCCCCCCHHH--HHHHHHc
Confidence 9999999987654444444455679999999999999999999999999999999999 899997632211 1111100
Q ss_pred hcCCccchhhcccccCchhhhhHHHHHHHHHHHHHHHhccccCcCCCCCHHHHHHHHHHhHHh
Q 002021 901 WLPISTMEVVDANLLSQEDIHFVAKEQCVSFVFNLAMECTMEFPKQRINAKEIVTKLLKIRDS 963 (979)
Q Consensus 901 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~eil~~L~~~~~~ 963 (979)
..+...+..+++++.++|.+||+.||++||||+||+++|+.+.++
T Consensus 276 ------------------g~~~~~p~~~~~~~~~li~~cl~~dP~~RPs~~ei~~~L~~l~~~ 320 (329)
T 4aoj_A 276 ------------------GRELERPRACPPEVYAIMRGCWQREPQQRHSIKDVHARLQALAQA 320 (329)
T ss_dssp ------------------TCCCCCCTTCCHHHHHHHHHHCCSSTTTSCCHHHHHHHHHHHHHS
T ss_pred ------------------CCCCCCcccccHHHHHHHHHHcCcChhHCcCHHHHHHHHHHHhhC
Confidence 001122345778899999999999999999999999999999864
No 16
>2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens}
Probab=100.00 E-value=1.2e-50 Score=487.00 Aligned_cols=482 Identities=22% Similarity=0.272 Sum_probs=379.8
Q ss_pred EEecCCCccccCCCCCcCCCCCCeeeccCCcccccCCccccccCcccEEecccccccccCCccccCCCCCcEEEccCCcc
Q 002021 77 LNISSLNLTGTIPSQLGNLSSLQSLNLSFNRLFGSIPSAIFTTYTLKYVCLRGNQLSGTFPSFISNKSSLQHLDLSSNAL 156 (979)
Q Consensus 77 l~l~~~~l~g~~~~~l~~l~~L~~L~L~~n~~~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l 156 (979)
++.++.+++ .+|..+. +++++|||++|++++..|.++..+++|++|+|++|++++..|..|+++++|++|+|++|.+
T Consensus 12 ~~c~~~~l~-~ip~~l~--~~l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~i~~~~~~~l~~L~~L~L~~n~l 88 (570)
T 2z63_A 12 YQCMELNFY-KIPDNLP--FSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPI 88 (570)
T ss_dssp EECCSSCCS-SCCSSSC--SSCCEEECCSCCCCEECTTTTTTCSSCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCC
T ss_pred EEeCCCCcc-ccCCCcc--ccccEEEccCCccCccChhHhhCCCCceEEECCCCcCCccCcccccCchhCCEEeCcCCcC
Confidence 555666776 5676553 5899999999999988888999999999999999999998889999999999999999999
Q ss_pred CchhhhhhhccCCcccCCCCccceeecccccccccccccccCCCCCCceecCCCeeeec-CCccccccCccceeeccCCC
Q 002021 157 SGEIRANICREIPREFGNLPELELMSLAANNLQGKIPLKIGNLRNLEKLDIGDNKLVGI-APIAIFNVSTLKILGLQDNS 235 (979)
Q Consensus 157 ~~~~~~~~~~~ip~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~-~p~~l~~l~~L~~L~L~~N~ 235 (979)
++. .|..|+++++|++|++++|++++..+..++++++|++|+|++|+++++ .|..|.++++|+.|++++|+
T Consensus 89 ~~~--------~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~l~~L~~L~L~~n~l~~~~lp~~~~~l~~L~~L~l~~n~ 160 (570)
T 2z63_A 89 QSL--------ALGAFSGLSSLQKLVAVETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNK 160 (570)
T ss_dssp CEE--------CTTTTTTCTTCCEEECTTSCCCCSTTCSCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECTTSC
T ss_pred Ccc--------CHhhhcCccccccccccccccccCCCccccccccccEEecCCCccceecChhhhcccCCCCEEeCcCCc
Confidence 853 457899999999999999999977777899999999999999999985 58999999999999999999
Q ss_pred CcCCCcccccCCCCCc----CEEEccCCccccccCcccccCCCCcEEecccccccc-ccCccccccccc-----------
Q 002021 236 LSGCLSSIGYARLPNL----EILSLWGNNFSGTIPRFIFNASKLSILDLEGNSFSG-FIPNTFGNLRNL----------- 299 (979)
Q Consensus 236 l~~~~~~~~~~~l~~L----~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~-~~~~~~~~l~~L----------- 299 (979)
+++..+. .+..+++| +.|++++|.+++..|..+... +|++|++++|.... ..+..+.+++++
T Consensus 161 l~~~~~~-~~~~l~~L~~~~~~L~l~~n~l~~~~~~~~~~~-~L~~L~l~~n~~~~~~~~~~~~~l~~l~~~~l~~~~~~ 238 (570)
T 2z63_A 161 IQSIYCT-DLRVLHQMPLLNLSLDLSLNPMNFIQPGAFKEI-RLHKLTLRNNFDSLNVMKTCIQGLAGLEVHRLVLGEFR 238 (570)
T ss_dssp CCEECGG-GGHHHHTCTTCCCEEECTTCCCCEECTTTTTTC-EEEEEEEESCCSCTTHHHHHHHTTTTCEEEEEEEEECC
T ss_pred cceecHH-HccchhccchhhhhcccCCCCceecCHHHhccC-cceeEecccccccccchhhhhcCccccceeeecccccc
Confidence 9876543 46667777 899999999998888777655 89999999984321 112223333333
Q ss_pred ---------------------cceecccc-ccccccchhhhhhcccCCCCccEEEccCCCCcccCCccccccccccccEE
Q 002021 300 ---------------------SWLVLSDN-YLTSSTQELSFLSSLSNCKFLKYFDLSYNPLYRILPRTTVGNLSHSLEEF 357 (979)
Q Consensus 300 ---------------------~~L~Ls~N-~l~~~~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~~L~~L 357 (979)
+.+++++| .+.... ...+..+++|++|++++|.+..++.. +..+ +|++|
T Consensus 239 ~~~~l~~~~~~~~~~l~~l~l~~l~l~~~~~~~~~~-----~~~~~~l~~L~~L~l~~~~l~~l~~~--~~~~--~L~~L 309 (570)
T 2z63_A 239 NEGNLEKFDKSALEGLCNLTIEEFRLAYLDYYLDDI-----IDLFNCLTNVSSFSLVSVTIERVKDF--SYNF--GWQHL 309 (570)
T ss_dssp CCSSCEECCTTTTGGGGGSEEEEEEEEETTEEESCS-----TTTTGGGTTCSEEEEESCEECSCCBC--CSCC--CCSEE
T ss_pred Cchhhhhcchhhhccccccchhhhhhhcchhhhhhc-----hhhhcCcCcccEEEecCccchhhhhh--hccC--CccEE
Confidence 33444444 232222 12356678888888888888765332 2223 78888
Q ss_pred EccCccccCCCCccccCCCcccEEEecCCCCCchhHHhhhcCCCCcEEEecCcccCCCc--cccccCCCCCceEecCCCc
Q 002021 358 KMSNCNISGGIPEEISNLTNLRTIYLGGNKLNGSILITLSKLQKLQDLGLKDNKLEGSI--PYDICNLAELYRLDLDGNK 435 (979)
Q Consensus 358 ~L~~n~i~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~--p~~~~~l~~L~~L~Ls~N~ 435 (979)
++++|.+. .+|. ..+++|+.|++++|.+.+..+. ..+++|++|++++|.+.+.. |..+..+++|++|++++|+
T Consensus 310 ~l~~n~~~-~l~~--~~l~~L~~L~l~~n~~~~~~~~--~~~~~L~~L~l~~n~l~~~~~~~~~~~~~~~L~~L~l~~n~ 384 (570)
T 2z63_A 310 ELVNCKFG-QFPT--LKLKSLKRLTFTSNKGGNAFSE--VDLPSLEFLDLSRNGLSFKGCCSQSDFGTTSLKYLDLSFNG 384 (570)
T ss_dssp EEESCBCS-SCCB--CBCSSCCEEEEESCBSCCBCCC--CBCTTCCEEECCSSCCBEEEEEEHHHHTCSCCCEEECCSCS
T ss_pred eeccCccc-ccCc--ccccccCEEeCcCCcccccccc--ccCCCCCEEeCcCCccCccccccccccccCccCEEECCCCc
Confidence 88888887 4443 4677888888888887765544 67888888888888887544 6677788888888888888
Q ss_pred ccccCCccccCCCcCceEecCCCccccccc--cccCcCCCcEEEeccccccCCCccccccccccceEeccCCccC-cccc
Q 002021 436 LSGSIPACFSNLTSLRIVSLGSNELTSIPL--TFWNLKDILNLNFSSNFLTGSLPLEIGSLKVLVGIDLSRNNFS-GVIP 512 (979)
Q Consensus 436 l~~~~~~~~~~l~~L~~L~L~~N~l~~lp~--~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~-~~~p 512 (979)
+.+..+. +..+++|++|++++|+++.++. .+..+++|+.|++++|.+++..|..+..+++|+.|+|++|+++ +.+|
T Consensus 385 l~~~~~~-~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~p 463 (570)
T 2z63_A 385 VITMSSN-FLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLP 463 (570)
T ss_dssp EEEEEEE-EETCTTCCEEECTTSEEESCTTSCTTTTCTTCCEEECTTSCCEECCTTTTTTCTTCCEEECTTCEEGGGEEC
T ss_pred ccccccc-ccccCCCCEEEccCCccccccchhhhhcCCCCCEEeCcCCcccccchhhhhcCCcCcEEECcCCcCccccch
Confidence 8765444 8888888888888888886543 5777888888888888888888888888888888888888887 5678
Q ss_pred hhhcCCcccceeecCCccccCCCCCcccccccccccccccccccccCCccccCccccCeEeccCCcccccCCCC
Q 002021 513 TEIGGLKNLEYLFLGYNRLQGSIPNSFGDLISLKFLNLSNNNLSGVIPASLEKLSYLEDLNLSFNQLEGKIPRG 586 (979)
Q Consensus 513 ~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~ 586 (979)
..+..+++|++|+|++|++++..|..|..+++|++|+|++|++++.+|..+..+++|+.|++++|+++|.+|..
T Consensus 464 ~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~~~~ 537 (570)
T 2z63_A 464 DIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMASNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCPRI 537 (570)
T ss_dssp SCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCCTTTT
T ss_pred hhhhcccCCCEEECCCCccccCChhhhhcccCCCEEeCCCCcCCCCCHHHhhcccCCcEEEecCCcccCCCcch
Confidence 88888888888888888888777888888888888888888888877777888888888888888888887764
No 17
>3omv_A RAF proto-oncogene serine/threonine-protein kinas; serine/threonine-protein kinase, transferase; HET: SM5; 4.00A {Homo sapiens}
Probab=100.00 E-value=1.5e-51 Score=444.90 Aligned_cols=263 Identities=27% Similarity=0.428 Sum_probs=208.3
Q ss_pred hCCCCCCceeeeecceEEEEEEcCCCcEEEEEEecccc--ccchhcHHHHHHHHHhcCCCCeeeEEEeeccCCeeEEEEE
Q 002021 681 TDGFSENNLIGRGGFGSVYKASLGDGMEVAVKVFTSQC--GRAFKSFDVECEIMKSIRHRNLIKVISSCSNEEFKALVLE 758 (979)
Q Consensus 681 ~~~~~~~~~lG~G~~g~Vy~~~~~~~~~vAvK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~E 758 (979)
.++++..+.||+|+||+||+|++.+ .||||+++... ....+.|.+|++++++++|||||++++++.+ +..++|||
T Consensus 35 ~~~l~l~~~iG~G~fG~Vy~~~~~~--~vAvK~~~~~~~~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~~-~~~~iVmE 111 (307)
T 3omv_A 35 ASEVMLSTRIGSGSFGTVYKGKWHG--DVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGYMTK-DNLAIVTQ 111 (307)
T ss_dssp TTSCCEEEECCCCSSSEEEEEESSS--EEEEEECCCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECS-SSCEEEEE
T ss_pred HHHeEEeeEEeeCCCcEEEEEEECC--cEEEEEEEecCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEC-CeEEEEEE
Confidence 3677888999999999999998753 59999986432 2345789999999999999999999999865 56899999
Q ss_pred ecCCCccceeeccCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCEEeCCCCcEEEEeeccccccCCCCCc
Q 002021 759 YMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFSIAKMLTGEDQS 838 (979)
Q Consensus 759 ~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~i~H~Dik~~NIll~~~~~~kl~Dfg~~~~~~~~~~~ 838 (979)
||++|+|.++++..+..+++.++..|+.|||+||+||| +++|+||||||+|||+++++.+||+|||+|+........
T Consensus 112 y~~gGsL~~~l~~~~~~l~~~~~~~i~~qia~gL~yLH---~~~IiHRDlKp~NILl~~~~~~Ki~DFGla~~~~~~~~~ 188 (307)
T 3omv_A 112 WCEGSSLYKHLHVQETKFQMFQLIDIARQTAQGMDYLH---AKNIIHRDMKSNNIFLHEGLTVKIGDFGLATVKSRWSGS 188 (307)
T ss_dssp CCSSCBHHHHHHTSCCCCCHHHHHHHHHHHHHHHHHHH---HTTCBCSCCCSSSEEEETTEEEEECCCSSCBC-------
T ss_pred cCCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHH---HCCccCCccCHHHEEECCCCcEEEeeccCceecccCCcc
Confidence 99999999999887778999999999999999999999 899999999999999999999999999999876443333
Q ss_pred ceecccccCCCCCCccccCC---CCCCCchhHHHHHHHHHHHHcCCCCCcccccCcchHhHhhhhhcCCccchhhccccc
Q 002021 839 MIQTQTLATIGYMAPEYGRE---GRVSANGDVYSFGIMLMETFTGKKPTDEIFNGEMTLKHWVNDWLPISTMEVVDANLL 915 (979)
Q Consensus 839 ~~~~~~~gt~~y~aPE~~~~---~~~~~~~DvwslG~il~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 915 (979)
......+||+.|||||++.+ +.|+.++|||||||++|||+||+.||....... .....+...... +..
T Consensus 189 ~~~~~~~GT~~ymAPE~l~~~~~~~y~~ksDVwS~Gvvl~Elltg~~Pf~~~~~~~-~~~~~~~~~~~~-------p~~- 259 (307)
T 3omv_A 189 QQVEQPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPYSHINNRD-QIIFMVGRGYAS-------PDL- 259 (307)
T ss_dssp -----CCCCTTSCCHHHHHCCSSCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCHH-HHHHHHHTTCCC-------CCS-
T ss_pred eeecccccCCCccCHHHhhccCCCCCCcHHHhHhHHHHHHHHHHCCCCCCCCChHH-HHHHHHhcCCCC-------CCc-
Confidence 33455689999999999853 468999999999999999999999997532221 111111110000 000
Q ss_pred CchhhhhHHHHHHHHHHHHHHHhccccCcCCCCCHHHHHHHHHHhHHhh
Q 002021 916 SQEDIHFVAKEQCVSFVFNLAMECTMEFPKQRINAKEIVTKLLKIRDSL 964 (979)
Q Consensus 916 ~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~eil~~L~~~~~~~ 964 (979)
...+..+++++.+++.+||+.||++||||.||+++|+.+..++
T Consensus 260 ------~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ei~~~Le~l~~~l 302 (307)
T 3omv_A 260 ------SKLYKNCPKAMKRLVADCVKKVKEERPLFPQILSSIELLQHSL 302 (307)
T ss_dssp ------TTSCTTSCHHHHHHHHHHTCSSSTTSCCHHHHHHHHHHHHTTC
T ss_pred ------ccccccchHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHhccC
Confidence 0122356778999999999999999999999999999887654
No 18
>4gt4_A Tyrosine-protein kinase transmembrane receptor RO; ATP binding, phosphorylation, transferase; 2.41A {Homo sapiens} PDB: 3zzw_A
Probab=100.00 E-value=3.5e-52 Score=452.27 Aligned_cols=256 Identities=25% Similarity=0.455 Sum_probs=212.9
Q ss_pred CCCCCceeeeecceEEEEEEc------CCCcEEEEEEeccccc-cchhcHHHHHHHHHhcCCCCeeeEEEeeccCCeeEE
Q 002021 683 GFSENNLIGRGGFGSVYKASL------GDGMEVAVKVFTSQCG-RAFKSFDVECEIMKSIRHRNLIKVISSCSNEEFKAL 755 (979)
Q Consensus 683 ~~~~~~~lG~G~~g~Vy~~~~------~~~~~vAvK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 755 (979)
+++..+.||+|+||+||+|.+ .+++.||||+++.... ...+.|.+|+.++++++|||||+++|+|.+++..++
T Consensus 27 ~~~~~~~lG~G~fG~Vykg~~~~~~~~~~~~~VAvK~l~~~~~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~~~~~~~l 106 (308)
T 4gt4_A 27 AVRFMEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRARLQHPNVVCLLGVVTKDQPLSM 106 (308)
T ss_dssp GEEEEEEEEECSSCEEEEEEEC-------CEEEEEEECCC-CCC-CHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEE
T ss_pred HCeEeeEeccCCCcEEEEEEEcCCccCCCCeEEEEEEECcccChHHHHHHHHHHHHHHhCCCCCCCCcceEEEECCEEEE
Confidence 456678999999999999976 2568899999975533 345789999999999999999999999999999999
Q ss_pred EEEecCCCccceeeccC---------------CCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCEEeCCCCc
Q 002021 756 VLEYMPHGSLEKYLYSS---------------NCILDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMV 820 (979)
Q Consensus 756 v~E~~~~g~L~~~l~~~---------------~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~i~H~Dik~~NIll~~~~~ 820 (979)
|||||++|+|.+++... +..+++.++++|+.|||+||+||| +++|+||||||+|||+++++.
T Consensus 107 V~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH---~~~iiHRDLK~~NILl~~~~~ 183 (308)
T 4gt4_A 107 IFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVAQIAAGMEYLS---SHHVVHKDLATRNVLVYDKLN 183 (308)
T ss_dssp EEECCSSCBHHHHHHTTCSSCCCC-----CCEECCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEECGGGC
T ss_pred EEEcCCCCcHHHHHHhhCccccccccccccccccCCCHHHHHHHHHHHHHHHHHHH---hCCCCCCCccccceEECCCCC
Confidence 99999999999999643 245899999999999999999999 999999999999999999999
Q ss_pred EEEEeeccccccCCCCCcceecccccCCCCCCccccCCCCCCCchhHHHHHHHHHHHHc-CCCCCcccccCcchHhHhhh
Q 002021 821 AHLSDFSIAKMLTGEDQSMIQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFT-GKKPTDEIFNGEMTLKHWVN 899 (979)
Q Consensus 821 ~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~t-g~~P~~~~~~~~~~~~~~~~ 899 (979)
+||+|||+++.....+.........||+.|||||++.++.|+.++|||||||++|||+| |+.||...... .....+.
T Consensus 184 ~Ki~DFGlar~~~~~~~~~~~~~~~gt~~ymAPE~l~~~~~s~ksDVwSfGvvl~El~t~g~~Pf~~~~~~--~~~~~i~ 261 (308)
T 4gt4_A 184 VKISDLGLFREVYAADYYKLLGNSLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGYSNQ--DVVEMIR 261 (308)
T ss_dssp EEECCSCCBCGGGGGGCBCSSSSSCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTCCHH--HHHHHHH
T ss_pred EEECCcccceeccCCCceeEecccccCCcccCHHHHhCCCCCccchhhhHHHHHHHHHhCCCCCCCCCCHH--HHHHHHH
Confidence 99999999987654444444456689999999999999999999999999999999999 89999763221 1111111
Q ss_pred hhcCCccchhhcccccCchhhhhHHHHHHHHHHHHHHHhccccCcCCCCCHHHHHHHHHHhH
Q 002021 900 DWLPISTMEVVDANLLSQEDIHFVAKEQCVSFVFNLAMECTMEFPKQRINAKEIVTKLLKIR 961 (979)
Q Consensus 900 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~eil~~L~~~~ 961 (979)
.. ...+.+..|+.++.++|.+||+.||++||||+||+++|+.+.
T Consensus 262 ~~------------------~~~~~p~~~~~~~~~li~~C~~~dP~~RPs~~ei~~~L~a~~ 305 (308)
T 4gt4_A 262 NR------------------QVLPCPDDCPAWVYALMIECWNEFPSRRPRFKDIHSRLRAWG 305 (308)
T ss_dssp TT------------------CCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTSC
T ss_pred cC------------------CCCCCcccchHHHHHHHHHHcCCChhHCcCHHHHHHHHHhcc
Confidence 00 011223467788999999999999999999999999998754
No 19
>2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens}
Probab=100.00 E-value=1.3e-49 Score=477.97 Aligned_cols=465 Identities=22% Similarity=0.195 Sum_probs=408.8
Q ss_pred CCcEEEEEecCCCccccCCCCCcCCCCCCeeeccCCcccccCCccccccCcccEEecccccccccCCccccCCCCCcEEE
Q 002021 71 SQRVTVLNISSLNLTGTIPSQLGNLSSLQSLNLSFNRLFGSIPSAIFTTYTLKYVCLRGNQLSGTFPSFISNKSSLQHLD 150 (979)
Q Consensus 71 ~~~v~~l~l~~~~l~g~~~~~l~~l~~L~~L~L~~n~~~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~ 150 (979)
..+++.|||++|++++..+.+++++++|++|||++|++++..|.++..+++|++|+|++|++++..|..|+++++|++|+
T Consensus 27 ~~~l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~i~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~ 106 (570)
T 2z63_A 27 PFSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLV 106 (570)
T ss_dssp CSSCCEEECCSCCCCEECTTTTTTCSSCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEE
T ss_pred cccccEEEccCCccCccChhHhhCCCCceEEECCCCcCCccCcccccCchhCCEEeCcCCcCCccCHhhhcCcccccccc
Confidence 34789999999999988888999999999999999999988889999999999999999999998889999999999999
Q ss_pred ccCCccCchhhhhhhccCCc-ccCCCCccceeecccccccc-cccccccCCCCCCceecCCCeeeecCCccccccCcc--
Q 002021 151 LSSNALSGEIRANICREIPR-EFGNLPELELMSLAANNLQG-KIPLKIGNLRNLEKLDIGDNKLVGIAPIAIFNVSTL-- 226 (979)
Q Consensus 151 Ls~N~l~~~~~~~~~~~ip~-~l~~l~~L~~L~L~~N~l~~-~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L-- 226 (979)
|++|.+++ +|. .++++++|++|++++|.+++ .+|..|+++++|++|++++|+++++.|..+..+++|
T Consensus 107 L~~n~l~~---------l~~~~~~~l~~L~~L~L~~n~l~~~~lp~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~ 177 (570)
T 2z63_A 107 AVETNLAS---------LENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTDLRVLHQMPL 177 (570)
T ss_dssp CTTSCCCC---------STTCSCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECTTSCCCEECGGGGHHHHTCTT
T ss_pred cccccccc---------CCCccccccccccEEecCCCccceecChhhhcccCCCCEEeCcCCccceecHHHccchhccch
Confidence 99999985 343 69999999999999999987 479999999999999999999999999999999999
Q ss_pred --ceeeccCCCCcCCCcccccCCCCCcCEEEccCCcccc-ccCcccccCC------------------------------
Q 002021 227 --KILGLQDNSLSGCLSSIGYARLPNLEILSLWGNNFSG-TIPRFIFNAS------------------------------ 273 (979)
Q Consensus 227 --~~L~L~~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~-~~p~~l~~l~------------------------------ 273 (979)
+.|++++|.+++..+. .|... +|++|++++|.... .++..+..++
T Consensus 178 ~~~~L~l~~n~l~~~~~~-~~~~~-~L~~L~l~~n~~~~~~~~~~~~~l~~l~~~~l~~~~~~~~~~l~~~~~~~~~~l~ 255 (570)
T 2z63_A 178 LNLSLDLSLNPMNFIQPG-AFKEI-RLHKLTLRNNFDSLNVMKTCIQGLAGLEVHRLVLGEFRNEGNLEKFDKSALEGLC 255 (570)
T ss_dssp CCCEEECTTCCCCEECTT-TTTTC-EEEEEEEESCCSCTTHHHHHHHTTTTCEEEEEEEEECCCCSSCEECCTTTTGGGG
T ss_pred hhhhcccCCCCceecCHH-HhccC-cceeEecccccccccchhhhhcCccccceeeeccccccCchhhhhcchhhhcccc
Confidence 8999999999987654 34444 89999999984321 1122222222
Q ss_pred --CCcEEecccc-ccccccCccccccccccceeccccccccccchhhhhhcccCCCCccEEEccCCCCcccCCccccccc
Q 002021 274 --KLSILDLEGN-SFSGFIPNTFGNLRNLSWLVLSDNYLTSSTQELSFLSSLSNCKFLKYFDLSYNPLYRILPRTTVGNL 350 (979)
Q Consensus 274 --~L~~L~Ls~N-~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~~l 350 (979)
+++.+++++| .+.+..|..|..+++|+.|++++|.++.++.. +..+ +|++|++++|.+..++.. .
T Consensus 256 ~l~l~~l~l~~~~~~~~~~~~~~~~l~~L~~L~l~~~~l~~l~~~------~~~~-~L~~L~l~~n~~~~l~~~-----~ 323 (570)
T 2z63_A 256 NLTIEEFRLAYLDYYLDDIIDLFNCLTNVSSFSLVSVTIERVKDF------SYNF-GWQHLELVNCKFGQFPTL-----K 323 (570)
T ss_dssp GSEEEEEEEEETTEEESCSTTTTGGGTTCSEEEEESCEECSCCBC------CSCC-CCSEEEEESCBCSSCCBC-----B
T ss_pred ccchhhhhhhcchhhhhhchhhhcCcCcccEEEecCccchhhhhh------hccC-CccEEeeccCcccccCcc-----c
Confidence 2556777777 77888899999999999999999999987653 5666 999999999999866442 2
Q ss_pred cccccEEEccCccccCCCCccccCCCcccEEEecCCCCCchh--HHhhhcCCCCcEEEecCcccCCCccccccCCCCCce
Q 002021 351 SHSLEEFKMSNCNISGGIPEEISNLTNLRTIYLGGNKLNGSI--LITLSKLQKLQDLGLKDNKLEGSIPYDICNLAELYR 428 (979)
Q Consensus 351 ~~~L~~L~L~~n~i~~~~p~~l~~l~~L~~L~L~~N~l~~~~--~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~ 428 (979)
.++|+.|++++|.+.+..+. ..+++|++|++++|++++.. +..+..+++|++|++++|.+.+..+ .+..+++|++
T Consensus 324 l~~L~~L~l~~n~~~~~~~~--~~~~~L~~L~l~~n~l~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~-~~~~l~~L~~ 400 (570)
T 2z63_A 324 LKSLKRLTFTSNKGGNAFSE--VDLPSLEFLDLSRNGLSFKGCCSQSDFGTTSLKYLDLSFNGVITMSS-NFLGLEQLEH 400 (570)
T ss_dssp CSSCCEEEEESCBSCCBCCC--CBCTTCCEEECCSSCCBEEEEEEHHHHTCSCCCEEECCSCSEEEEEE-EEETCTTCCE
T ss_pred ccccCEEeCcCCcccccccc--ccCCCCCEEeCcCCccCccccccccccccCccCEEECCCCccccccc-cccccCCCCE
Confidence 46899999999999877665 78999999999999998765 7889999999999999999996544 4999999999
Q ss_pred EecCCCcccccCC-ccccCCCcCceEecCCCcccc-ccccccCcCCCcEEEecccccc-CCCccccccccccceEeccCC
Q 002021 429 LDLDGNKLSGSIP-ACFSNLTSLRIVSLGSNELTS-IPLTFWNLKDILNLNFSSNFLT-GSLPLEIGSLKVLVGIDLSRN 505 (979)
Q Consensus 429 L~Ls~N~l~~~~~-~~~~~l~~L~~L~L~~N~l~~-lp~~~~~l~~L~~L~ls~N~l~-~~~p~~~~~l~~L~~L~Ls~N 505 (979)
|++++|++.+..+ ..+.++++|++|++++|+++. .|..+..+++|+.|++++|.++ +.+|..+..+++|+.|+|++|
T Consensus 401 L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~p~~~~~l~~L~~L~l~~n 480 (570)
T 2z63_A 401 LDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQC 480 (570)
T ss_dssp EECTTSEEESCTTSCTTTTCTTCCEEECTTSCCEECCTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTS
T ss_pred EEccCCccccccchhhhhcCCCCCEEeCcCCcccccchhhhhcCCcCcEEECcCCcCccccchhhhhcccCCCEEECCCC
Confidence 9999999998766 578999999999999999995 5667889999999999999998 678999999999999999999
Q ss_pred ccCcccchhhcCCcccceeecCCccccCCCCCcccccccccccccccccccccCCc
Q 002021 506 NFSGVIPTEIGGLKNLEYLFLGYNRLQGSIPNSFGDLISLKFLNLSNNNLSGVIPA 561 (979)
Q Consensus 506 ~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~ 561 (979)
++++..|..|..+++|++|+|++|++++..|..|.++++|+.|++++|++++..|.
T Consensus 481 ~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~~~ 536 (570)
T 2z63_A 481 QLEQLSPTAFNSLSSLQVLNMASNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCPR 536 (570)
T ss_dssp CCCEECTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCCTTT
T ss_pred ccccCChhhhhcccCCCEEeCCCCcCCCCCHHHhhcccCCcEEEecCCcccCCCcc
Confidence 99999999999999999999999999998888999999999999999999987764
No 20
>2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A*
Probab=100.00 E-value=1.2e-49 Score=475.91 Aligned_cols=483 Identities=20% Similarity=0.176 Sum_probs=408.7
Q ss_pred CccceeEeeCC--CCcEEEEEecCCCccccCCCCCcCCCCCCeeeccCCcccccCCccccccCcccEEecccccccccCC
Q 002021 60 CNWTGVACEVH--SQRVTVLNISSLNLTGTIPSQLGNLSSLQSLNLSFNRLFGSIPSAIFTTYTLKYVCLRGNQLSGTFP 137 (979)
Q Consensus 60 c~w~gv~c~~~--~~~v~~l~l~~~~l~g~~~~~l~~l~~L~~L~L~~n~~~~~~p~~~~~l~~L~~L~L~~n~l~~~~p 137 (979)
|++.+++.-+. ...++.|+|++|++++..|..++++++|++|+|++|++++..|.+++.+++|++|+|++|++++..|
T Consensus 12 ~~~~~l~~ip~~~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~ 91 (549)
T 2z81_A 12 GRSRSFTSIPSGLTAAMKSLDLSFNKITYIGHGDLRACANLQVLILKSSRINTIEGDAFYSLGSLEHLDLSDNHLSSLSS 91 (549)
T ss_dssp CTTSCCSSCCSCCCTTCCEEECCSSCCCEECSSTTSSCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCCSCCH
T ss_pred CCCCccccccccCCCCccEEECcCCccCccChhhhhcCCcccEEECCCCCcCccChhhccccccCCEEECCCCccCccCH
Confidence 56666665432 3579999999999999889999999999999999999999999999999999999999999999888
Q ss_pred ccccCCCCCcEEEccCCccCchhhhhhhccCCcccCCCCccceeeccccccccccc-ccccCCCCCCceecCCCeeeecC
Q 002021 138 SFISNKSSLQHLDLSSNALSGEIRANICREIPREFGNLPELELMSLAANNLQGKIP-LKIGNLRNLEKLDIGDNKLVGIA 216 (979)
Q Consensus 138 ~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~~ip~~l~~l~~L~~L~L~~N~l~~~~p-~~~~~l~~L~~L~Ls~N~l~~~~ 216 (979)
..++++++|++|+|++|.+++. .+|..++++++|++|++++|.+.+.+| ..++++++|++|++++|++++..
T Consensus 92 ~~~~~l~~L~~L~Ls~n~l~~~-------~~~~~~~~l~~L~~L~L~~n~~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~ 164 (549)
T 2z81_A 92 SWFGPLSSLKYLNLMGNPYQTL-------GVTSLFPNLTNLQTLRIGNVETFSEIRRIDFAGLTSLNELEIKALSLRNYQ 164 (549)
T ss_dssp HHHTTCTTCCEEECTTCCCSSS-------CSSCSCTTCTTCCEEEEEESSSCCEECTTTTTTCCEEEEEEEEETTCCEEC
T ss_pred HHhccCCCCcEEECCCCccccc-------chhhhhhccCCccEEECCCCccccccCHhhhhcccccCeeeccCCcccccC
Confidence 8899999999999999999853 357889999999999999999554554 68999999999999999999999
Q ss_pred CccccccCccceeeccCCCCcCCCcccccCCCCCcCEEEccCCcccccc--C-cccccCCCCcEEeccccccccccCc--
Q 002021 217 PIAIFNVSTLKILGLQDNSLSGCLSSIGYARLPNLEILSLWGNNFSGTI--P-RFIFNASKLSILDLEGNSFSGFIPN-- 291 (979)
Q Consensus 217 p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~--p-~~l~~l~~L~~L~Ls~N~l~~~~~~-- 291 (979)
|..+.++++|+.|+++.|.+.... ...+..+++|++|++++|++++.. | .....+++|+.|++++|.+++..+.
T Consensus 165 ~~~l~~l~~L~~L~l~~n~~~~~~-~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~l 243 (549)
T 2z81_A 165 SQSLKSIRDIHHLTLHLSESAFLL-EIFADILSSVRYLELRDTNLARFQFSPLPVDEVSSPMKKLAFRGSVLTDESFNEL 243 (549)
T ss_dssp TTTTTTCSEEEEEEEECSBSTTHH-HHHHHSTTTBSEEEEESCBCTTCCCCCCSSCCCCCCCCEEEEESCEEEHHHHHHH
T ss_pred hhhhhccccCceEecccCcccccc-hhhHhhcccccEEEccCCccccccccccchhhhhhcccceeccccccchhHHHHH
Confidence 999999999999999999987543 333567999999999999998742 2 2234578999999999999875543
Q ss_pred --cccccccccceeccccccccccchh-hhhhcccCCCCccEEEccCCCCcccCCccc---cccccccccEEEccCcccc
Q 002021 292 --TFGNLRNLSWLVLSDNYLTSSTQEL-SFLSSLSNCKFLKYFDLSYNPLYRILPRTT---VGNLSHSLEEFKMSNCNIS 365 (979)
Q Consensus 292 --~~~~l~~L~~L~Ls~N~l~~~~~~~-~~~~~l~~l~~L~~L~Ls~N~l~~~~~~~~---~~~l~~~L~~L~L~~n~i~ 365 (979)
.+..+++|+.|++++|.+.+...-. .....+..+.+|+.|+++++.+........ ......+|+.|++++|.++
T Consensus 244 ~~~~~~~~~L~~l~l~~~~~~~~~~~~~~~~~~~~~l~~L~~L~l~~~~i~~~~~~~~l~~~~~~~~~L~~L~l~~n~l~ 323 (549)
T 2z81_A 244 LKLLRYILELSEVEFDDCTLNGLGDFNPSESDVVSELGKVETVTIRRLHIPQFYLFYDLSTVYSLLEKVKRITVENSKVF 323 (549)
T ss_dssp HGGGGGCTTCCEEEEESCEEECCSCCCCCTTTCCCCCTTCCEEEEESCBCSCGGGSCCCCHHHHHSTTCCEEEEESSCCC
T ss_pred HHHhhhhccccccccccccccccccccccchhhhhhhcccccccccccccchhhhcccchhhhhhcccceEEEeccCccc
Confidence 4567789999999999987653211 112345778899999999998765421111 1122458999999999998
Q ss_pred CCCCccc-cCCCcccEEEecCCCCCchhHHh---hhcCCCCcEEEecCcccCCCcc--ccccCCCCCceEecCCCccccc
Q 002021 366 GGIPEEI-SNLTNLRTIYLGGNKLNGSILIT---LSKLQKLQDLGLKDNKLEGSIP--YDICNLAELYRLDLDGNKLSGS 439 (979)
Q Consensus 366 ~~~p~~l-~~l~~L~~L~L~~N~l~~~~~~~---l~~l~~L~~L~L~~N~l~~~~p--~~~~~l~~L~~L~Ls~N~l~~~ 439 (979)
.+|..+ ..+++|++|++++|++++..+.. +..+++|++|++++|++++..+ ..+..+++|++|++++|+++ .
T Consensus 324 -~ip~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~l~~L~~L~Ls~N~l~-~ 401 (549)
T 2z81_A 324 -LVPCSFSQHLKSLEFLDLSENLMVEEYLKNSACKGAWPSLQTLVLSQNHLRSMQKTGEILLTLKNLTSLDISRNTFH-P 401 (549)
T ss_dssp -CCCHHHHHHCTTCCEEECCSSCCCHHHHHHHTCTTSSTTCCEEECTTSCCCCHHHHHHHGGGCTTCCEEECTTCCCC-C
T ss_pred -cCCHHHHhcCccccEEEccCCccccccccchhhhhccccCcEEEccCCcccccccchhhhhcCCCCCEEECCCCCCc-c
Confidence 566655 68999999999999999877543 7899999999999999986543 56899999999999999999 6
Q ss_pred CCccccCCCcCceEecCCCccccccccccCcCCCcEEEeccccccCCCccccccccccceEeccCCccCcccchhhcCCc
Q 002021 440 IPACFSNLTSLRIVSLGSNELTSIPLTFWNLKDILNLNFSSNFLTGSLPLEIGSLKVLVGIDLSRNNFSGVIPTEIGGLK 519 (979)
Q Consensus 440 ~~~~~~~l~~L~~L~L~~N~l~~lp~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~ 519 (979)
+|..+..+++|++|++++|+++.+|..+. ++|+.|++++|++++.. ..+++|+.|+|++|+|+ .+|. ...++
T Consensus 402 lp~~~~~~~~L~~L~Ls~N~l~~l~~~~~--~~L~~L~Ls~N~l~~~~----~~l~~L~~L~Ls~N~l~-~ip~-~~~l~ 473 (549)
T 2z81_A 402 MPDSCQWPEKMRFLNLSSTGIRVVKTCIP--QTLEVLDVSNNNLDSFS----LFLPRLQELYISRNKLK-TLPD-ASLFP 473 (549)
T ss_dssp CCSCCCCCTTCCEEECTTSCCSCCCTTSC--TTCSEEECCSSCCSCCC----CCCTTCCEEECCSSCCS-SCCC-GGGCT
T ss_pred CChhhcccccccEEECCCCCcccccchhc--CCceEEECCCCChhhhc----ccCChhcEEECCCCccC-cCCC-cccCc
Confidence 78889999999999999999999887653 68999999999999753 57899999999999999 5665 56799
Q ss_pred ccceeecCCccccCCCCCcccccccccccccccccccccCC
Q 002021 520 NLEYLFLGYNRLQGSIPNSFGDLISLKFLNLSNNNLSGVIP 560 (979)
Q Consensus 520 ~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p 560 (979)
+|++|+|++|++++.+|..|..+++|+.|+|++|++++..|
T Consensus 474 ~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~~ 514 (549)
T 2z81_A 474 VLLVMKISRNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCP 514 (549)
T ss_dssp TCCEEECCSSCCCCCCTTGGGGCTTCCEEECCSSCBCCCHH
T ss_pred cCCEEecCCCccCCcCHHHHhcCcccCEEEecCCCccCCCc
Confidence 99999999999999889999999999999999999987765
No 21
>4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697}
Probab=100.00 E-value=1.6e-50 Score=489.10 Aligned_cols=506 Identities=18% Similarity=0.257 Sum_probs=332.8
Q ss_pred CChhHHHHHHHHHHhcccCCCCccccccCCCCC----CCccceeE-eeCC--CCcEEEEEecCCCccccCCCCCcCCCCC
Q 002021 26 STITDQDALLALKAHITHDPTNFLAKNWNTSTP----VCNWTGVA-CEVH--SQRVTVLNISSLNLTGTIPSQLGNLSSL 98 (979)
Q Consensus 26 ~~~~~~~all~~k~~~~~~~~~~~~~~w~~~~~----~c~w~gv~-c~~~--~~~v~~l~l~~~~l~g~~~~~l~~l~~L 98 (979)
...++...-.++++-...-. ...|....+ .|+|..-+ |..- ...|+. + . -.++
T Consensus 24 ~~~~~~~d~~aL~~~~~~~~----~~~w~~~~~~~~~~~~W~~~~~~c~w~~~~GV~C---~---------~----~~~V 83 (636)
T 4eco_A 24 RTAEYIKDYLALKEIWDALN----GKNWSQQGFGTQPGANWNFNKELDMWGAQPGVSL---N---------S----NGRV 83 (636)
T ss_dssp CCCHHHHHHHHHHHHHHHTT----GGGCCCCC------CCCCCSSCGGGTTCCTTEEE---C---------T----TCCE
T ss_pred hhhhHHHHHHHHHHHHHHcC----CCCcccCCcCCccCCCCCCCCCcccccCCCCeEE---c---------C----CCCE
Confidence 34556677888887765432 247874332 25796321 2110 012221 0 0 0467
Q ss_pred CeeeccCCcccccCCccccccCcccEEecccccc------cc------cCCccccCCCCCcEEEccCCccCchhhhhhhc
Q 002021 99 QSLNLSFNRLFGSIPSAIFTTYTLKYVCLRGNQL------SG------TFPSFISNKSSLQHLDLSSNALSGEIRANICR 166 (979)
Q Consensus 99 ~~L~L~~n~~~~~~p~~~~~l~~L~~L~L~~n~l------~~------~~p~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~ 166 (979)
+.|+|++|+++|.+|++++.+++|++|+|++|.+ .| .+|... +..|+ +++++|.+.+.
T Consensus 84 ~~L~L~~~~l~g~lp~~l~~L~~L~~L~Ls~N~~~~~~~~~~~~~~~~~~~~~~--~~~l~-l~l~~~~l~~~------- 153 (636)
T 4eco_A 84 TGLSLEGFGASGRVPDAIGQLTELEVLALGSHGEKVNERLFGPKGISANMSDEQ--KQKMR-MHYQKTFVDYD------- 153 (636)
T ss_dssp EEEECTTSCCEEEECGGGGGCTTCCEEESCCGGGGGTCCSBSTTSBCTTCCHHH--HHHHH-THHHHHHTCCC-------
T ss_pred EEEEecCcccCCcCChHHhcCccceEEECcCCccccCCccccccccccCchHHH--HHHHH-hhHHHhhhccC-------
Confidence 8888888888888888888888888888888876 22 333333 44555 66666665543
Q ss_pred cCCcccCC-CCccceeecccccccccccccccCCCCCCceecC--CCeeeecCCccccccCccceeeccCCCCcC-----
Q 002021 167 EIPREFGN-LPELELMSLAANNLQGKIPLKIGNLRNLEKLDIG--DNKLVGIAPIAIFNVSTLKILGLQDNSLSG----- 238 (979)
Q Consensus 167 ~ip~~l~~-l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls--~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~----- 238 (979)
+|..++. +..+..+++....+. ......++.+.+. +|++++ +|..+.++++|++|+|++|++++
T Consensus 154 -~~~~~~~~~~~l~~~~l~~~~~~------~~~~~~l~~l~l~~~~n~l~~-ip~~l~~l~~L~~L~Ls~n~l~~~~~~~ 225 (636)
T 4eco_A 154 -PREDFSDLIKDCINSDPQQKSIK------KSSRITLKDTQIGQLSNNITF-VSKAVMRLTKLRQFYMGNSPFVAENICE 225 (636)
T ss_dssp -GGGGSCHHHHHHHHHCTTSCCCC------CCCCCCCCTTTTTCCSCEEEE-ECGGGGGCTTCCEEEEESCCCCGGGBSS
T ss_pred -chhhHHHHHHHHhhcCccccccc------cccccchhhhhhccccCCCcc-CCHHHhcccCCCEEECcCCccccccccc
Confidence 2222221 122223333222221 1112234444443 577888 67778888888888888887776
Q ss_pred -------------CCcccccCCCCCcCEEEccCCccccccCcccccCCCCcEEeccccc-ccc-ccCcccccc------c
Q 002021 239 -------------CLSSIGYARLPNLEILSLWGNNFSGTIPRFIFNASKLSILDLEGNS-FSG-FIPNTFGNL------R 297 (979)
Q Consensus 239 -------------~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~-l~~-~~~~~~~~l------~ 297 (979)
++....|..+++|++|+|++|++.+.+|..++++++|++|+|++|+ +++ .+|..++.+ +
T Consensus 226 ~~~~~~~~~~~~~ip~~l~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~n~~l~~~~lp~~~~~L~~~~~l~ 305 (636)
T 4eco_A 226 AWENENSEYAQQYKTEDLKWDNLKDLTDVEVYNCPNLTKLPTFLKALPEMQLINVACNRGISGEQLKDDWQALADAPVGE 305 (636)
T ss_dssp SCSCTTSHHHHHHTTSCCCGGGCTTCCEEEEECCTTCSSCCTTTTTCSSCCEEECTTCTTSCHHHHHHHHHHHHHSGGGG
T ss_pred cccccccchhcccCchhhhhcccCCCCEEEecCCcCCccChHHHhcCCCCCEEECcCCCCCccccchHHHHhhhccccCC
Confidence 3332222255555555555555555555555555555555555555 555 455555444 5
Q ss_pred cccceeccccccccccchhhhhhcccCCCCccEEEccCCCCcccCCccccccccccccEEEccCccccCCCCccccCCCc
Q 002021 298 NLSWLVLSDNYLTSSTQELSFLSSLSNCKFLKYFDLSYNPLYRILPRTTVGNLSHSLEEFKMSNCNISGGIPEEISNLTN 377 (979)
Q Consensus 298 ~L~~L~Ls~N~l~~~~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~~L~~L~L~~n~i~~~~p~~l~~l~~ 377 (979)
+|++|+|++|+++.+|.. ..+.+++ +|++|++++|+++|.+| .++.+++
T Consensus 306 ~L~~L~L~~n~l~~ip~~----~~l~~l~--------------------------~L~~L~L~~N~l~g~ip-~~~~l~~ 354 (636)
T 4eco_A 306 KIQIIYIGYNNLKTFPVE----TSLQKMK--------------------------KLGMLECLYNQLEGKLP-AFGSEIK 354 (636)
T ss_dssp TCCEEECCSSCCSSCCCH----HHHTTCT--------------------------TCCEEECCSCCCEEECC-CCEEEEE
T ss_pred CCCEEECCCCcCCccCch----hhhccCC--------------------------CCCEEeCcCCcCccchh-hhCCCCC
Confidence 555555555555433320 0133334 45555555555555566 6677777
Q ss_pred ccEEEecCCCCCchhHHhhhcCCC-CcEEEecCcccCCCccccccCCC--CCceEecCCCcccccCCcccc-------CC
Q 002021 378 LRTIYLGGNKLNGSILITLSKLQK-LQDLGLKDNKLEGSIPYDICNLA--ELYRLDLDGNKLSGSIPACFS-------NL 447 (979)
Q Consensus 378 L~~L~L~~N~l~~~~~~~l~~l~~-L~~L~L~~N~l~~~~p~~~~~l~--~L~~L~Ls~N~l~~~~~~~~~-------~l 447 (979)
|++|+|++|+++ .+|..+..+++ |++|++++|.++ .+|..+..+. +|+.|++++|++++..|..+. .+
T Consensus 355 L~~L~L~~N~l~-~lp~~l~~l~~~L~~L~Ls~N~l~-~lp~~~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~~~~~~~~~ 432 (636)
T 4eco_A 355 LASLNLAYNQIT-EIPANFCGFTEQVENLSFAHNKLK-YIPNIFDAKSVSVMSAIDFSYNEIGSVDGKNFDPLDPTPFKG 432 (636)
T ss_dssp ESEEECCSSEEE-ECCTTSEEECTTCCEEECCSSCCS-SCCSCCCTTCSSCEEEEECCSSCTTTTTTCSSCTTCSSCCCC
T ss_pred CCEEECCCCccc-cccHhhhhhcccCcEEEccCCcCc-ccchhhhhcccCccCEEECcCCcCCCcchhhhcccccccccC
Confidence 777777777777 55566777777 777777777777 5676666554 788888888888877777777 67
Q ss_pred CcCceEecCCCcccccccccc-CcCCCcEEEeccccccCCCccc-cccc-------cccceEeccCCccCcccchhhc--
Q 002021 448 TSLRIVSLGSNELTSIPLTFW-NLKDILNLNFSSNFLTGSLPLE-IGSL-------KVLVGIDLSRNNFSGVIPTEIG-- 516 (979)
Q Consensus 448 ~~L~~L~L~~N~l~~lp~~~~-~l~~L~~L~ls~N~l~~~~p~~-~~~l-------~~L~~L~Ls~N~l~~~~p~~~~-- 516 (979)
++|++|+|++|+++.+|..+. .+++|+.|++++|+++ .+|.. +... ++|+.|+|++|+++ .+|..+.
T Consensus 433 ~~L~~L~Ls~N~l~~lp~~~~~~l~~L~~L~Ls~N~l~-~i~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~~ 510 (636)
T 4eco_A 433 INVSSINLSNNQISKFPKELFSTGSPLSSINLMGNMLT-EIPKNSLKDENENFKNTYLLTSIDLRFNKLT-KLSDDFRAT 510 (636)
T ss_dssp CCEEEEECCSSCCCSCCTHHHHTTCCCSEEECCSSCCS-BCCSSSSEETTEECTTGGGCCEEECCSSCCC-BCCGGGSTT
T ss_pred CCCCEEECcCCccCcCCHHHHccCCCCCEEECCCCCCC-CcCHHHhccccccccccCCccEEECcCCcCC-ccChhhhhc
Confidence 788888888888888877544 4788888888888888 44443 3322 38999999999998 6777776
Q ss_pred CCcccceeecCCccccCCCCCccccccccccccc------ccccccccCCccccCccccCeEeccCCcccccCCCCCCCC
Q 002021 517 GLKNLEYLFLGYNRLQGSIPNSFGDLISLKFLNL------SNNNLSGVIPASLEKLSYLEDLNLSFNQLEGKIPRGGSFG 590 (979)
Q Consensus 517 ~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L------s~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~ 590 (979)
.+++|+.|+|++|++++ +|..+..+++|+.|+| ++|++.+.+|..+..+++|+.|+|++|++ +.+|.. .++
T Consensus 511 ~l~~L~~L~Ls~N~l~~-ip~~~~~l~~L~~L~Ls~N~~ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l-~~ip~~-~~~ 587 (636)
T 4eco_A 511 TLPYLVGIDLSYNSFSK-FPTQPLNSSTLKGFGIRNQRDAQGNRTLREWPEGITLCPSLTQLQIGSNDI-RKVNEK-ITP 587 (636)
T ss_dssp TCTTCCEEECCSSCCSS-CCCGGGGCSSCCEEECCSCBCTTCCBCCCCCCTTGGGCSSCCEEECCSSCC-CBCCSC-CCT
T ss_pred cCCCcCEEECCCCCCCC-cChhhhcCCCCCEEECCCCcccccCcccccChHHHhcCCCCCEEECCCCcC-CccCHh-HhC
Confidence 88999999999999996 8888889999999998 67889999999999999999999999999 788875 448
Q ss_pred CcccccccCCccccCCC
Q 002021 591 NFSAQSFEGNELLCGSP 607 (979)
Q Consensus 591 ~~~~~~~~~N~~~c~~p 607 (979)
.+..+.+++|+..|-..
T Consensus 588 ~L~~L~Ls~N~l~~~~~ 604 (636)
T 4eco_A 588 NISVLDIKDNPNISIDL 604 (636)
T ss_dssp TCCEEECCSCTTCEEEC
T ss_pred cCCEEECcCCCCccccH
Confidence 89999999999988554
No 22
>4fih_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP; 1.97A {Homo sapiens} PDB: 4fig_A* 4fif_A* 4fii_A* 4fij_A*
Probab=100.00 E-value=6e-50 Score=437.51 Aligned_cols=250 Identities=24% Similarity=0.287 Sum_probs=210.7
Q ss_pred CCCCCCceeeeecceEEEEEE-cCCCcEEEEEEeccccccchhcHHHHHHHHHhcCCCCeeeEEEeeccCCeeEEEEEec
Q 002021 682 DGFSENNLIGRGGFGSVYKAS-LGDGMEVAVKVFTSQCGRAFKSFDVECEIMKSIRHRNLIKVISSCSNEEFKALVLEYM 760 (979)
Q Consensus 682 ~~~~~~~~lG~G~~g~Vy~~~-~~~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~E~~ 760 (979)
..|+..+.||+|+||+||+|. ..+|+.||||++........+.+.+|+++|+.++|||||+++++|.+++..|+|||||
T Consensus 74 ~~y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~~~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~~~~ivmEy~ 153 (346)
T 4fih_A 74 SYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFL 153 (346)
T ss_dssp GTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGCSSGGGGHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEECCC
T ss_pred HhcEEeEEeecCcCeEEEEEEECCCCCEEEEEEEecCchhHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEeCC
Confidence 458888999999999999995 4679999999997665556677899999999999999999999999999999999999
Q ss_pred CCCccceeeccCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCEEeCCCCcEEEEeeccccccCCCCCcce
Q 002021 761 PHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFSIAKMLTGEDQSMI 840 (979)
Q Consensus 761 ~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~i~H~Dik~~NIll~~~~~~kl~Dfg~~~~~~~~~~~~~ 840 (979)
+||+|.+++... .+++.++..++.||+.||+||| +++|+||||||+|||++.++.+||+|||+|+.+..... .
T Consensus 154 ~gg~L~~~l~~~--~l~e~~~~~~~~qi~~aL~ylH---~~~IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~~~~--~ 226 (346)
T 4fih_A 154 EGGALTDIVTHT--RMNEEQIAAVCLAVLQALSVLH---AQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVP--R 226 (346)
T ss_dssp TTEEHHHHHHHS--CCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECTTCCEEECCCTTCEECCSSSC--C
T ss_pred CCCcHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHH---HCCcccccCCHHHEEECCCCCEEEecCcCceecCCCCC--c
Confidence 999999998764 5999999999999999999999 99999999999999999999999999999987643322 2
Q ss_pred ecccccCCCCCCccccCCCCCCCchhHHHHHHHHHHHHcCCCCCcccccCcchHhHhhhhhcCCccchhhcccccCchhh
Q 002021 841 QTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFTGKKPTDEIFNGEMTLKHWVNDWLPISTMEVVDANLLSQEDI 920 (979)
Q Consensus 841 ~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 920 (979)
....+||+.|||||++.+..|+.++||||+||++|||++|+.||..... ......+....+ .
T Consensus 227 ~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~--~~~~~~i~~~~~----------------~ 288 (346)
T 4fih_A 227 RKSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPP--LKAMKMIRDNLP----------------P 288 (346)
T ss_dssp BCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCH--HHHHHHHHHSSC----------------C
T ss_pred ccccccCcCcCCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCH--HHHHHHHHcCCC----------------C
Confidence 3557899999999999999999999999999999999999999975221 111111111100 0
Q ss_pred hhHHHHHHHHHHHHHHHhccccCcCCCCCHHHHHHH
Q 002021 921 HFVAKEQCVSFVFNLAMECTMEFPKQRINAKEIVTK 956 (979)
Q Consensus 921 ~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~eil~~ 956 (979)
....+..+++++.+++.+||+.||++|||++|+++|
T Consensus 289 ~~~~~~~~s~~~~dli~~~L~~dP~~R~ta~e~l~H 324 (346)
T 4fih_A 289 RLKNLHKVSPSLKGFLDRLLVRDPAQRATAAELLKH 324 (346)
T ss_dssp CCSCGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTTC
T ss_pred CCCccccCCHHHHHHHHHHcCCChhHCcCHHHHhcC
Confidence 111223456779999999999999999999999886
No 23
>2z7x_B TOLL-like receptor 1, variable lymphocyte recepto; TLR2, TLR1, lipopeptide, innate immunity, glycoPro immune response, inflammatory response, leucine-rich repeat membrane, receptor; HET: NAG NDG MAN BMA PCJ; 2.10A {Homo sapiens}
Probab=100.00 E-value=2.7e-49 Score=469.19 Aligned_cols=461 Identities=19% Similarity=0.209 Sum_probs=325.8
Q ss_pred EEEecCCCccccCCCCCcCCCCCCeeeccCCcccccCCccccccCcccEEecccccccccCCccccCCCCCcEEEccCCc
Q 002021 76 VLNISSLNLTGTIPSQLGNLSSLQSLNLSFNRLFGSIPSAIFTTYTLKYVCLRGNQLSGTFPSFISNKSSLQHLDLSSNA 155 (979)
Q Consensus 76 ~l~l~~~~l~g~~~~~l~~l~~L~~L~L~~n~~~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~N~ 155 (979)
.||+++|+++ .+|..+. ++|++|||++|++++..|.++..+++|++|+|++|++++..|..|+++++|++|||++|+
T Consensus 4 ~l~ls~n~l~-~ip~~~~--~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~ 80 (520)
T 2z7x_B 4 LVDRSKNGLI-HVPKDLS--QKTTILNISQNYISELWTSDILSLSKLRILIISHNRIQYLDISVFKFNQELEYLDLSHNK 80 (520)
T ss_dssp EEECTTSCCS-SCCCSCC--TTCSEEECCSSCCCCCCHHHHTTCTTCCEEECCSSCCCEEEGGGGTTCTTCCEEECCSSC
T ss_pred eEecCCCCcc-ccccccc--ccccEEECCCCcccccChhhccccccccEEecCCCccCCcChHHhhcccCCCEEecCCCc
Confidence 5666677666 4565554 666666666666665555666666666666666666666666666666666666666666
Q ss_pred cCchhhhhhhccCCcccCCCCccceeecccccccc-cccccccCCCCCCceecCCCeeeecCCccccccCccceeeccCC
Q 002021 156 LSGEIRANICREIPREFGNLPELELMSLAANNLQG-KIPLKIGNLRNLEKLDIGDNKLVGIAPIAIFNVSTLKILGLQDN 234 (979)
Q Consensus 156 l~~~~~~~~~~~ip~~l~~l~~L~~L~L~~N~l~~-~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N 234 (979)
+++ +|.. .+++|++|+|++|++++ .+|..|+++++|++|+|++|++++ ..+..+++|
T Consensus 81 l~~---------lp~~--~l~~L~~L~L~~N~l~~~~~p~~~~~l~~L~~L~L~~n~l~~---~~~~~l~~L-------- 138 (520)
T 2z7x_B 81 LVK---------ISCH--PTVNLKHLDLSFNAFDALPICKEFGNMSQLKFLGLSTTHLEK---SSVLPIAHL-------- 138 (520)
T ss_dssp CCE---------EECC--CCCCCSEEECCSSCCSSCCCCGGGGGCTTCCEEEEEESSCCG---GGGGGGTTS--------
T ss_pred eee---------cCcc--ccCCccEEeccCCccccccchhhhccCCcceEEEecCcccch---hhccccccc--------
Confidence 652 4443 55666666666666654 345556666666666666655554 233334444
Q ss_pred CCcCCCcccccCCCCCcCEEEccCCcc--ccccCcccccCC-CCcEEeccccccccccC-ccccccccccceeccccc--
Q 002021 235 SLSGCLSSIGYARLPNLEILSLWGNNF--SGTIPRFIFNAS-KLSILDLEGNSFSGFIP-NTFGNLRNLSWLVLSDNY-- 308 (979)
Q Consensus 235 ~l~~~~~~~~~~~l~~L~~L~L~~N~l--~~~~p~~l~~l~-~L~~L~Ls~N~l~~~~~-~~~~~l~~L~~L~Ls~N~-- 308 (979)
+|++|++++|.+ .+..|..+..+. +...+++++|.+.+.++ ..+.++++|+.|++++|.
T Consensus 139 ---------------~L~~L~l~~n~l~~~~~~~~~l~~l~~~~l~l~l~~n~~~~~~~~~~~~~l~~L~~L~l~~n~~~ 203 (520)
T 2z7x_B 139 ---------------NISKVLLVLGETYGEKEDPEGLQDFNTESLHIVFPTNKEFHFILDVSVKTVANLELSNIKCVLED 203 (520)
T ss_dssp ---------------CEEEEEEEECTTTTSSCCTTTTTTCCEEEEEEECCSSSCCCCCCCCCCTTCSEEEECCEEECCST
T ss_pred ---------------eeeEEEeecccccccccccccccccccceEEEEeccCcchhhhhhhhhhcccceeeccccccccc
Confidence 015555555555 444454444433 23345566666554433 345566666666666664
Q ss_pred --cccccchhhhhhcccCCCCccEEEccCCCCcccCCcccccc-ccccccEEEccCccccCCCCccc-----cCCCcccE
Q 002021 309 --LTSSTQELSFLSSLSNCKFLKYFDLSYNPLYRILPRTTVGN-LSHSLEEFKMSNCNISGGIPEEI-----SNLTNLRT 380 (979)
Q Consensus 309 --l~~~~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~~-l~~~L~~L~L~~n~i~~~~p~~l-----~~l~~L~~ 380 (979)
+..... .+..+..+++|++|++++|.+.+......... ..++|++|++++|++++.+|..+ +.+++|+.
T Consensus 204 ~~~~~~~~---~~~~l~~l~~L~~L~l~~~~l~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~p~~~~~~~~~~l~~L~~ 280 (520)
T 2z7x_B 204 NKCSYFLS---ILAKLQTNPKLSNLTLNNIETTWNSFIRILQLVWHTTVWYFSISNVKLQGQLDFRDFDYSGTSLKALSI 280 (520)
T ss_dssp TTTHHHHH---HHHGGGGCTTCCEEEEEEEEEEHHHHHHHHHHHHTSSCSEEEEEEEEEESCCCCCCCCCCSCCCCEEEE
T ss_pred cccceeec---chhhhccccchhhccccccccCHHHHHHHHHHhhhCcccEEEeecccccCccccchhhcccccCceeEe
Confidence 111111 12245566667777776666543211111100 02378999999999998899888 99999999
Q ss_pred EEecCCCCCchhHHhhhcC---CCCcEEEecCcccCCCccccccCCCCCceEecCCCcccccCCccccCCCcCceEecCC
Q 002021 381 IYLGGNKLNGSILITLSKL---QKLQDLGLKDNKLEGSIPYDICNLAELYRLDLDGNKLSGSIPACFSNLTSLRIVSLGS 457 (979)
Q Consensus 381 L~L~~N~l~~~~~~~l~~l---~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~ 457 (979)
+++++|.+ ..+...+..+ .+|+.|++++|.+.... .+..+++|++|++++|++++..|..+..+++|++|++++
T Consensus 281 l~l~~n~~-~~p~~~~~~~~~~~~L~~L~l~~n~l~~~~--~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~ 357 (520)
T 2z7x_B 281 HQVVSDVF-GFPQSYIYEIFSNMNIKNFTVSGTRMVHML--CPSKISPFLHLDFSNNLLTDTVFENCGHLTELETLILQM 357 (520)
T ss_dssp EEEEECCC-CSCTHHHHHHHHTCCCSEEEEESSCCCCCC--CCSSCCCCCEEECCSSCCCTTTTTTCCCCSSCCEEECCS
T ss_pred ccccccce-ecchhhhhcccccCceeEEEcCCCcccccc--chhhCCcccEEEeECCccChhhhhhhccCCCCCEEEccC
Confidence 99999999 3333555544 78999999999987532 136889999999999999998999999999999999999
Q ss_pred Ccccc---ccccccCcCCCcEEEeccccccCCCcc-ccccccccceEeccCCccCcccchhhcCCcccceeecCCccccC
Q 002021 458 NELTS---IPLTFWNLKDILNLNFSSNFLTGSLPL-EIGSLKVLVGIDLSRNNFSGVIPTEIGGLKNLEYLFLGYNRLQG 533 (979)
Q Consensus 458 N~l~~---lp~~~~~l~~L~~L~ls~N~l~~~~p~-~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~ 533 (979)
|+++. +|..+..+++|+.|++++|++++.+|. .+..+++|+.|++++|++++..|..+. ++|+.|+|++|+++
T Consensus 358 N~l~~l~~~~~~~~~l~~L~~L~Ls~N~l~~~l~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~--~~L~~L~Ls~N~l~- 434 (520)
T 2z7x_B 358 NQLKELSKIAEMTTQMKSLQQLDISQNSVSYDEKKGDCSWTKSLLSLNMSSNILTDTIFRCLP--PRIKVLDLHSNKIK- 434 (520)
T ss_dssp SCCCBHHHHHHHHTTCTTCCEEECCSSCCBCCGGGCSCCCCTTCCEEECCSSCCCGGGGGSCC--TTCCEEECCSSCCC-
T ss_pred CccCccccchHHHhhCCCCCEEECCCCcCCcccccchhccCccCCEEECcCCCCCcchhhhhc--ccCCEEECCCCccc-
Confidence 99995 456789999999999999999985665 488999999999999999988888775 79999999999999
Q ss_pred CCCCcccccccccccccccccccccCCccccCccccCeEeccCCcccccCCC
Q 002021 534 SIPNSFGDLISLKFLNLSNNNLSGVIPASLEKLSYLEDLNLSFNQLEGKIPR 585 (979)
Q Consensus 534 ~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~ 585 (979)
.+|..+..+++|++|+|++|+|++..+..+..+++|+.|++++|+++|.++.
T Consensus 435 ~ip~~~~~l~~L~~L~L~~N~l~~l~~~~~~~l~~L~~L~l~~N~~~c~c~~ 486 (520)
T 2z7x_B 435 SIPKQVVKLEALQELNVASNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCPR 486 (520)
T ss_dssp CCCGGGGGCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCBCCCHHH
T ss_pred ccchhhhcCCCCCEEECCCCcCCccCHHHhccCCcccEEECcCCCCcccCCc
Confidence 7888888999999999999999954444499999999999999999998763
No 24
>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A*
Probab=100.00 E-value=9.8e-50 Score=434.64 Aligned_cols=256 Identities=22% Similarity=0.273 Sum_probs=209.0
Q ss_pred CCCCCCceeeeecceEEEEEE-cCCCcEEEEEEeccccccchhcHHHHHHHHHhcCCCCeeeEEEeeccCCeeEEEEEec
Q 002021 682 DGFSENNLIGRGGFGSVYKAS-LGDGMEVAVKVFTSQCGRAFKSFDVECEIMKSIRHRNLIKVISSCSNEEFKALVLEYM 760 (979)
Q Consensus 682 ~~~~~~~~lG~G~~g~Vy~~~-~~~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~E~~ 760 (979)
+.|+..++||+|+||+||+|. ..+|+.||||+++... ...+|+++++.++|||||++++++.+++..|+||||+
T Consensus 58 ~~~~~~~~lG~G~fG~Vy~a~~~~~g~~vAiK~i~~~~-----~~~~E~~il~~l~HpnIV~l~~~~~~~~~~~ivmEy~ 132 (336)
T 4g3f_A 58 HWMTHQPRVGRGSFGEVHRMKDKQTGFQCAVKKVRLEV-----FRVEELVACAGLSSPRIVPLYGAVREGPWVNIFMELL 132 (336)
T ss_dssp TEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTT-----CCTHHHHTTTTCCCTTBCCEEEEEEETTEEEEEECCC
T ss_pred hheEeCcEeccCCCeEEEEEEECCCCCEEEEEEECHHH-----hHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEecc
Confidence 456777899999999999995 5679999999996532 2246999999999999999999999999999999999
Q ss_pred CCCccceeeccCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCEEeCCCC-cEEEEeeccccccCCCCCc-
Q 002021 761 PHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNM-VAHLSDFSIAKMLTGEDQS- 838 (979)
Q Consensus 761 ~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~i~H~Dik~~NIll~~~~-~~kl~Dfg~~~~~~~~~~~- 838 (979)
+||+|.+++.+.+ .+++.++..++.||+.||+||| +++|+||||||+|||++.++ .+||+|||+|+........
T Consensus 133 ~gg~L~~~l~~~~-~l~e~~~~~~~~qi~~aL~ylH---~~~IiHRDlKp~NILl~~~g~~vKl~DFGla~~~~~~~~~~ 208 (336)
T 4g3f_A 133 EGGSLGQLIKQMG-CLPEDRALYYLGQALEGLEYLH---TRRILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGK 208 (336)
T ss_dssp TTCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHH---TTTEECSCCCGGGEEECTTSCCEEECCCTTCEEC-------
T ss_pred CCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHH---HCCceecccCHHHEEEeCCCCEEEEeeCCCCeEccCCCccc
Confidence 9999999997654 6999999999999999999999 99999999999999999987 6999999999876533221
Q ss_pred --ceecccccCCCCCCccccCCCCCCCchhHHHHHHHHHHHHcCCCCCcccccCcchHhHhhhhhcCCccchhhcccccC
Q 002021 839 --MIQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFTGKKPTDEIFNGEMTLKHWVNDWLPISTMEVVDANLLS 916 (979)
Q Consensus 839 --~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 916 (979)
......+||+.|||||++.+..|+.++||||+||++|||+||+.||......+... .......
T Consensus 209 ~~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyemltG~~Pf~~~~~~~~~~-~i~~~~~-------------- 273 (336)
T 4g3f_A 209 SLLTGDYIPGTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNGCHPWTQYFRGPLCL-KIASEPP-------------- 273 (336)
T ss_dssp -----CCCCCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSTTTCCSCCHH-HHHHSCC--------------
T ss_pred ceecCCccccCccccCHHHHCCCCCCcHHHHHHHHHHHHHHHHCcCCCCCCCHHHHHH-HHHcCCC--------------
Confidence 12234579999999999999999999999999999999999999997643332211 1111000
Q ss_pred chhhhhHHHHHHHHHHHHHHHhccccCcCCCCCHHHHHHHHHHhHHhh
Q 002021 917 QEDIHFVAKEQCVSFVFNLAMECTMEFPKQRINAKEIVTKLLKIRDSL 964 (979)
Q Consensus 917 ~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~eil~~L~~~~~~~ 964 (979)
.....+..+++++.+++.+||+.||.+|||+.|+++++.+.....
T Consensus 274 ---~~~~~~~~~s~~~~~li~~~L~~dP~~R~sa~el~~~l~~~l~~~ 318 (336)
T 4g3f_A 274 ---PIREIPPSCAPLTAQAIQEGLRKEPVHRASAMELRRKVGKALQEV 318 (336)
T ss_dssp ---GGGGSCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHT
T ss_pred ---CchhcCccCCHHHHHHHHHHccCCHhHCcCHHHHHHHHHHHHhhh
Confidence 001122356778999999999999999999999999998887643
No 25
>4ase_A Vascular endothelial growth factor receptor 2; transferase, angiogenesis, signaling protein, phosphorylatio receptor, inhibitor; HET: AV9; 1.83A {Homo sapiens} PDB: 4agd_A* 4asd_A* 4agc_A*
Probab=100.00 E-value=4.4e-50 Score=443.45 Aligned_cols=271 Identities=24% Similarity=0.378 Sum_probs=222.1
Q ss_pred ccHHHHHHhhCCCCCCceeeeecceEEEEEEcC------CCcEEEEEEeccccc-cchhcHHHHHHHHHhcCC-CCeeeE
Q 002021 672 FSYLELCRATDGFSENNLIGRGGFGSVYKASLG------DGMEVAVKVFTSQCG-RAFKSFDVECEIMKSIRH-RNLIKV 743 (979)
Q Consensus 672 ~~~~~~~~~~~~~~~~~~lG~G~~g~Vy~~~~~------~~~~vAvK~~~~~~~-~~~~~~~~E~~~l~~l~h-~niv~l 743 (979)
+...+++...++|++.+.||+|+||+||+|.+. .++.||||++..... ...+.|.+|+++|++++| ||||++
T Consensus 54 ~~~~~wEi~~~~~~l~~~LG~G~fG~Vy~a~~~~~~~~~~~k~VAvK~l~~~~~~~~~~~~~~E~~il~~l~hhpnIV~l 133 (353)
T 4ase_A 54 YDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNL 133 (353)
T ss_dssp CCHHHHBCCGGGEEEEEEEEECSSEEEEEEEEETSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCE
T ss_pred CCCcccEecHHHeEEeeEEecCCCeEEEEEEEcCCCcccCCeEEEEEEEccccChHHHHHHHHHHHHHHHcCCCCcEEEE
Confidence 344555556678999999999999999999642 346899999975543 345678999999999975 899999
Q ss_pred EEeeccC-CeeEEEEEecCCCccceeeccC---------------CCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecC
Q 002021 744 ISSCSNE-EFKALVLEYMPHGSLEKYLYSS---------------NCILDIFQRLNIMIDVASALEYLHFGYSAPVIHCD 807 (979)
Q Consensus 744 ~~~~~~~-~~~~lv~E~~~~g~L~~~l~~~---------------~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~i~H~D 807 (979)
+++|.++ +..++|||||++|+|.++++.. +..+++.+++.++.|||+||+||| +++|+|||
T Consensus 134 ~g~~~~~~~~~~iV~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qia~gl~yLH---~~~iiHRD 210 (353)
T 4ase_A 134 LGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLA---SRKCIHRD 210 (353)
T ss_dssp EEEECCTTSCCEEEEECCTTEEHHHHHHHTGGGBCCC-------CTTCBCHHHHHHHHHHHHHHHHHHH---HTTCCCSC
T ss_pred EEEEEecCCEEEEEEEcCCCCCHHHHHHhcccccccccccchhhccccCCHHHHHHHHHHHHHHHHhHh---hCCeecCc
Confidence 9998764 5689999999999999999753 235899999999999999999999 99999999
Q ss_pred CCCCCEEeCCCCcEEEEeeccccccCCCCCcceecccccCCCCCCccccCCCCCCCchhHHHHHHHHHHHHc-CCCCCcc
Q 002021 808 LKPSNVLLDDNMVAHLSDFSIAKMLTGEDQSMIQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFT-GKKPTDE 886 (979)
Q Consensus 808 ik~~NIll~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~t-g~~P~~~ 886 (979)
|||+|||+++++.+||+|||+|+...............||+.|||||++.+..|+.++|||||||++|||+| |+.||..
T Consensus 211 LK~~NILl~~~~~vKi~DFGlar~~~~~~~~~~~~~~~gt~~ymAPE~l~~~~y~~ksDVwS~Gv~l~El~t~G~~Pf~~ 290 (353)
T 4ase_A 211 LAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPG 290 (353)
T ss_dssp CSGGGEEECGGGCEEECCCGGGSCTTTCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTT
T ss_pred cCccceeeCCCCCEEECcchhhhhcccCCCceeeccccccccccCHHHHhcCCCCCcccEeehHHHHHHHHhCCCCCCCC
Confidence 999999999999999999999987755544445566789999999999999999999999999999999998 9999976
Q ss_pred cccCcchHhHhhhhhcCCccchhhcccccCchhhhhHHHHHHHHHHHHHHHhccccCcCCCCCHHHHHHHHHHhHHhh
Q 002021 887 IFNGEMTLKHWVNDWLPISTMEVVDANLLSQEDIHFVAKEQCVSFVFNLAMECTMEFPKQRINAKEIVTKLLKIRDSL 964 (979)
Q Consensus 887 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~eil~~L~~~~~~~ 964 (979)
....+. +...+.. ..+...+..+++++.++|.+||+.||++||||.||+++|+++.++-
T Consensus 291 ~~~~~~-~~~~i~~------------------g~~~~~p~~~~~~~~~li~~c~~~dP~~RPt~~eil~~L~~llq~~ 349 (353)
T 4ase_A 291 VKIDEE-FCRRLKE------------------GTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQAN 349 (353)
T ss_dssp CCCSHH-HHHHHHH------------------TCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHT
T ss_pred CCHHHH-HHHHHHc------------------CCCCCCCccCCHHHHHHHHHHcCcChhHCcCHHHHHHHHHHHHHHh
Confidence 432221 1111111 0111223456778999999999999999999999999999998653
No 26
>4b9d_A Serine/threonine-protein kinase NEK1; transferase, inhibitor; HET: CK7; 1.90A {Homo sapiens} PDB: 4apc_A*
Probab=100.00 E-value=3.7e-50 Score=439.86 Aligned_cols=251 Identities=20% Similarity=0.311 Sum_probs=203.4
Q ss_pred hCCCCCCceeeeecceEEEEEE-cCCCcEEEEEEecccc--ccchhcHHHHHHHHHhcCCCCeeeEEEeeccCCeeEEEE
Q 002021 681 TDGFSENNLIGRGGFGSVYKAS-LGDGMEVAVKVFTSQC--GRAFKSFDVECEIMKSIRHRNLIKVISSCSNEEFKALVL 757 (979)
Q Consensus 681 ~~~~~~~~~lG~G~~g~Vy~~~-~~~~~~vAvK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 757 (979)
.++|+..+.||+|+||+||+|. ..+|+.||||++.... ....+.+.+|++++++++|||||++++++.+++..|+||
T Consensus 23 me~Y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~yiVm 102 (350)
T 4b9d_A 23 MEKYVRLQKIGEGSFGKAILVKSTEDGRQYVIKEINISRMSSKEREESRREVAVLANMKHPNIVQYRESFEENGSLYIVM 102 (350)
T ss_dssp CCCEEEEEEC------CEEEEEETTTCCEEEEEEEECTTSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEE
T ss_pred ccceEEeEEEecCCCeEEEEEEECCCCCEEEEEEEehHHCCHHHHHHHHHHHHHHHHCCCCCCCcEEEEEEECCEEEEEE
Confidence 3679999999999999999995 5679999999996542 234567899999999999999999999999999999999
Q ss_pred EecCCCccceeeccC-CCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCEEeCCCCcEEEEeeccccccCCCC
Q 002021 758 EYMPHGSLEKYLYSS-NCILDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFSIAKMLTGED 836 (979)
Q Consensus 758 E~~~~g~L~~~l~~~-~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~i~H~Dik~~NIll~~~~~~kl~Dfg~~~~~~~~~ 836 (979)
||++||+|.+++... ...+++.+++.|+.||+.||+||| +++|+||||||+|||+++++.+||+|||+|+.....
T Consensus 103 Ey~~gg~L~~~i~~~~~~~~~e~~~~~~~~qi~~aL~ylH---~~~IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~~- 178 (350)
T 4b9d_A 103 DYCEGGDLFKRINAQKGVLFQEDQILDWFVQICLALKHVH---DRKILHRDIKSQNIFLTKDGTVQLGDFGIARVLNST- 178 (350)
T ss_dssp ECCTTCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHH---HTTCEETTCCGGGEEECTTCCEEECSTTEESCCCHH-
T ss_pred eCCCCCcHHHHHHHcCCCCCCHHHHHHHHHHHHHHHHHHH---HCCeeeccCCHHHEEECCCCCEEEcccccceeecCC-
Confidence 999999999999754 345799999999999999999999 999999999999999999999999999999876322
Q ss_pred CcceecccccCCCCCCccccCCCCCCCchhHHHHHHHHHHHHcCCCCCcccccCcchHhHhhhhhcCCccchhhcccccC
Q 002021 837 QSMIQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFTGKKPTDEIFNGEMTLKHWVNDWLPISTMEVVDANLLS 916 (979)
Q Consensus 837 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 916 (979)
.......+||+.|||||++.+..|+.++||||+||++|||+||+.||......+ .+........+
T Consensus 179 -~~~~~~~~GT~~YmAPE~l~~~~y~~~~DiwSlGvilyemltG~~PF~~~~~~~-~~~~i~~~~~~------------- 243 (350)
T 4b9d_A 179 -VELARACIGTPYYLSPEICENKPYNNKSDIWALGCVLYELCTLKHAFEAGSMKN-LVLKIISGSFP------------- 243 (350)
T ss_dssp -HHHHHHHHSCCTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHH-HHHHHHHTCCC-------------
T ss_pred -cccccccCCCccccCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHHH-HHHHHHcCCCC-------------
Confidence 112245679999999999999999999999999999999999999997532111 11111111100
Q ss_pred chhhhhHHHHHHHHHHHHHHHhccccCcCCCCCHHHHHHH
Q 002021 917 QEDIHFVAKEQCVSFVFNLAMECTMEFPKQRINAKEIVTK 956 (979)
Q Consensus 917 ~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~eil~~ 956 (979)
+.+..+++++.+++.+||+.||++|||++|+++|
T Consensus 244 ------~~~~~~s~~~~~li~~~L~~dP~~R~s~~e~l~h 277 (350)
T 4b9d_A 244 ------PVSLHYSYDLRSLVSQLFKRNPRDRPSVNSILEK 277 (350)
T ss_dssp ------CCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHTS
T ss_pred ------CCCccCCHHHHHHHHHHccCChhHCcCHHHHhcC
Confidence 1122456679999999999999999999999886
No 27
>4aw0_A HPDK1, 3-phosphoinositide-dependent protein kinase 1; transferase, allosteric regulation, allosteric site, phosphorylation, AGC protein kinase; HET: SEP ATP MJF; 1.43A {Homo sapiens} PDB: 3hrc_A* 3hrf_A* 4a06_A* 4a07_A* 3rcj_A* 4aw1_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* 1uu3_A* ...
Probab=100.00 E-value=4e-50 Score=432.21 Aligned_cols=250 Identities=24% Similarity=0.364 Sum_probs=210.3
Q ss_pred CCCCCCceeeeecceEEEEEE-cCCCcEEEEEEecccc---ccchhcHHHHHHHHHhcCCCCeeeEEEeeccCCeeEEEE
Q 002021 682 DGFSENNLIGRGGFGSVYKAS-LGDGMEVAVKVFTSQC---GRAFKSFDVECEIMKSIRHRNLIKVISSCSNEEFKALVL 757 (979)
Q Consensus 682 ~~~~~~~~lG~G~~g~Vy~~~-~~~~~~vAvK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 757 (979)
++|++.+.||+|+||+||+|. ..+|+.||||++.+.. ....+.+.+|++++++++|||||++++++.+++..|+||
T Consensus 32 ~dy~i~~~lG~G~fg~V~~a~~~~~~~~~AiK~i~k~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~yivm 111 (311)
T 4aw0_A 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGL 111 (311)
T ss_dssp GGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred cccEEEEEEecccCeEEEEEEECCCCCEEEEEEEEHHHCCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEE
Confidence 569999999999999999994 5689999999996532 334567899999999999999999999999999999999
Q ss_pred EecCCCccceeeccCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCEEeCCCCcEEEEeeccccccCCCCC
Q 002021 758 EYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFSIAKMLTGEDQ 837 (979)
Q Consensus 758 E~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~i~H~Dik~~NIll~~~~~~kl~Dfg~~~~~~~~~~ 837 (979)
||++||+|.+++.+.+ .+++.+++.++.||+.||+||| +++|+||||||+|||+++++.+||+|||+|+.+.....
T Consensus 112 Ey~~gG~L~~~i~~~~-~l~e~~~~~~~~qi~~al~ylH---~~~IiHRDlKPeNILl~~~g~vKl~DFGla~~~~~~~~ 187 (311)
T 4aw0_A 112 SYAKNGELLKYIRKIG-SFDETCTRFYTAEIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESK 187 (311)
T ss_dssp CCCTTEEHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECTTSCEEECCCTTCEECCTTTT
T ss_pred ecCCCCCHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHH---HCCCccCCCCHHHeEEcCCCCEEEEEcCCceecCCCCC
Confidence 9999999999997654 6999999999999999999999 99999999999999999999999999999998754444
Q ss_pred cceecccccCCCCCCccccCCCCCCCchhHHHHHHHHHHHHcCCCCCcccccCcchHhHhhhhhcCCccchhhcccccCc
Q 002021 838 SMIQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFTGKKPTDEIFNGEMTLKHWVNDWLPISTMEVVDANLLSQ 917 (979)
Q Consensus 838 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 917 (979)
.......+||+.|||||++.+..|+.++||||+||++|||+||+.||...... ..+........
T Consensus 188 ~~~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~~-~~~~~i~~~~~--------------- 251 (311)
T 4aw0_A 188 QARANSFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEG-LIFAKIIKLEY--------------- 251 (311)
T ss_dssp CCCBCCCCSCGGGCCHHHHHHSCBCHHHHHHHHHHHHHHHHHSSCSSCCSSHH-HHHHHHHHTCC---------------
T ss_pred cccccCcccCcccCCHHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHH-HHHHHHHcCCC---------------
Confidence 44445678999999999999999999999999999999999999999752211 11111111000
Q ss_pred hhhhhHHHHHHHHHHHHHHHhccccCcCCCCCHHHHHHH
Q 002021 918 EDIHFVAKEQCVSFVFNLAMECTMEFPKQRINAKEIVTK 956 (979)
Q Consensus 918 ~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~eil~~ 956 (979)
..++.+++++.+++.+|++.||++|||++|++.+
T Consensus 252 -----~~p~~~s~~~~dli~~lL~~dp~~R~t~~e~~~~ 285 (311)
T 4aw0_A 252 -----DFPEKFFPKARDLVEKLLVLDATKRLGCEEMEGY 285 (311)
T ss_dssp -----CCCTTCCHHHHHHHHHHSCSSGGGSTTSGGGTCH
T ss_pred -----CCCcccCHHHHHHHHHHccCCHhHCcChHHHcCC
Confidence 0112345678999999999999999999997554
No 28
>3hmm_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*
Probab=100.00 E-value=1.9e-49 Score=432.39 Aligned_cols=277 Identities=22% Similarity=0.294 Sum_probs=202.7
Q ss_pred CCCCCceeeeecceEEEEEEcCCCcEEEEEEeccccccchhcHHHHHHHHHhcCCCCeeeEEEeeccCC----eeEEEEE
Q 002021 683 GFSENNLIGRGGFGSVYKASLGDGMEVAVKVFTSQCGRAFKSFDVECEIMKSIRHRNLIKVISSCSNEE----FKALVLE 758 (979)
Q Consensus 683 ~~~~~~~lG~G~~g~Vy~~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~----~~~lv~E 758 (979)
+|...+.||+|+||+||+|++ +|+.||||++..... ....+++|+..+.+++|||||+++++|.+++ ..++|||
T Consensus 4 ~i~L~~~iG~G~fG~Vy~~~~-~g~~VAvK~l~~~~~-~~~~~e~Ei~~~~~l~HpNIv~l~g~~~~~~~~~~~~~lV~E 81 (303)
T 3hmm_A 4 TIVLQESIGKGRFGEVWRGKW-RGEEVAVKIFSSREE-RSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWLVSD 81 (303)
T ss_dssp GEEEEEEEEECSSSEEEEEEE-TTEEEEEEEECGGGH-HHHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEEEEEEE
T ss_pred EEEEEEEEeeCCCeEEEEEEE-CCEEEEEEEECccch-hhHHHHHHHHHHhcCCCCCCCcEEEEEEecCCCceEEEEEec
Confidence 466778999999999999988 689999999965422 1122334555567889999999999997653 5799999
Q ss_pred ecCCCccceeeccCCCCCCHHHHHHHHHHHHHHHHHHhcCC-----CCCeEecCCCCCCEEeCCCCcEEEEeeccccccC
Q 002021 759 YMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGY-----SAPVIHCDLKPSNVLLDDNMVAHLSDFSIAKMLT 833 (979)
Q Consensus 759 ~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~-----~~~i~H~Dik~~NIll~~~~~~kl~Dfg~~~~~~ 833 (979)
|+++|+|.++++.. .++++++.+++.|+|+||+|||..+ .++|+||||||+|||+++++.+||+|||+|+...
T Consensus 82 y~~~gsL~~~l~~~--~l~~~~~~~i~~~ia~gl~ylH~~~~~~~~~~~IiHRDlKp~NILl~~~~~~Ki~DFGla~~~~ 159 (303)
T 3hmm_A 82 YHEHGSLFDYLNRY--TVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHD 159 (303)
T ss_dssp CCTTCBHHHHHHHC--CBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCCEECSCCCGGGEEECTTSCEEECCCTTCEEEE
T ss_pred CCCCCcHHHHHHhC--CCCHHHHHHHHHHHHHHHHHHHHhhhhccCCCCEeeccCCcccEEECCCCCEEEEeCCCCcccc
Confidence 99999999999765 5899999999999999999999321 2399999999999999999999999999998765
Q ss_pred CCCCc--ceecccccCCCCCCccccCCC------CCCCchhHHHHHHHHHHHHcCCCCCcccccCcchHhHhhhhhcCCc
Q 002021 834 GEDQS--MIQTQTLATIGYMAPEYGREG------RVSANGDVYSFGIMLMETFTGKKPTDEIFNGEMTLKHWVNDWLPIS 905 (979)
Q Consensus 834 ~~~~~--~~~~~~~gt~~y~aPE~~~~~------~~~~~~DvwslG~il~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~ 905 (979)
..... ......+||+.|||||++.+. .+++++|||||||++|||+||+.||......+..+..+........
T Consensus 160 ~~~~~~~~~~~~~~GT~~ymAPE~l~~~~~~~~~~~~~k~DVwS~Gvvl~El~tg~~~~~~~~~~~~p~~~~~~~~~~~~ 239 (303)
T 3hmm_A 160 SATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSDPSVE 239 (303)
T ss_dssp TTTTEESCC-----CCGGGCCHHHHTTCSCTTCHHHHHHHHHHHHHHHHHHHHHTBCBTTBCCCCCCTTTTTSCSSCCHH
T ss_pred CCCCceeeecccccccccccCHHHhcccccccCCccChhHhhhhHHHHHHHHHHCCCCCCccccccccchhcccccchHH
Confidence 43322 122345799999999998653 4678999999999999999999887654433332221111000000
Q ss_pred -cchhhcccccCchhhhhHHHHHHHHHHHHHHHhccccCcCCCCCHHHHHHHHHHhHHh
Q 002021 906 -TMEVVDANLLSQEDIHFVAKEQCVSFVFNLAMECTMEFPKQRINAKEIVTKLLKIRDS 963 (979)
Q Consensus 906 -~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~eil~~L~~~~~~ 963 (979)
....+.....+..-........++..+.++|.+||+.||++||||.||+++|+++.++
T Consensus 240 ~~~~~~~~~~~rp~~p~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~ei~~~L~~l~~~ 298 (303)
T 3hmm_A 240 EMRKVVCEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQLSQQ 298 (303)
T ss_dssp HHHHHHTTSCCCCCCCGGGGSSHHHHHHHHHHHTTCCSSGGGSCCHHHHHHHHHHHHHC
T ss_pred HHHHHHhcccCCCCCCccccchHHHHHHHHHHHHHcccCHhHCcCHHHHHHHHHHHHHH
Confidence 0000000111111111122234667899999999999999999999999999998764
No 29
>4fie_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP ANP; 3.11A {Homo sapiens}
Probab=100.00 E-value=9.6e-49 Score=438.57 Aligned_cols=250 Identities=24% Similarity=0.287 Sum_probs=210.6
Q ss_pred CCCCCCceeeeecceEEEEEE-cCCCcEEEEEEeccccccchhcHHHHHHHHHhcCCCCeeeEEEeeccCCeeEEEEEec
Q 002021 682 DGFSENNLIGRGGFGSVYKAS-LGDGMEVAVKVFTSQCGRAFKSFDVECEIMKSIRHRNLIKVISSCSNEEFKALVLEYM 760 (979)
Q Consensus 682 ~~~~~~~~lG~G~~g~Vy~~~-~~~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~E~~ 760 (979)
+.|+..+.||+|+||.||+|. ..+|+.||||++........+.+.+|+++|+.++|||||+++++|.+++..|+|||||
T Consensus 151 ~~y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~~~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~~~~iVmEy~ 230 (423)
T 4fie_A 151 SYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFL 230 (423)
T ss_dssp GTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEESTTCSSGGGHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECC
T ss_pred HhcEeeeEeccCcCcEEEEEEECCCCCEEEEEEEeccchhHHHHHHHHHHHHHhCCCCCCCceEEEEEECCEEEEEEeCC
Confidence 468899999999999999995 5679999999997665556678999999999999999999999999999999999999
Q ss_pred CCCccceeeccCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCEEeCCCCcEEEEeeccccccCCCCCcce
Q 002021 761 PHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFSIAKMLTGEDQSMI 840 (979)
Q Consensus 761 ~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~i~H~Dik~~NIll~~~~~~kl~Dfg~~~~~~~~~~~~~ 840 (979)
+||+|.+++... .+++.++..++.||+.||+||| +++|+||||||+|||++.++.+||+|||+|+.+..... .
T Consensus 231 ~gG~L~~~i~~~--~l~e~~~~~~~~qil~aL~ylH---~~~IiHRDiKp~NILl~~~g~vKl~DFGla~~~~~~~~--~ 303 (423)
T 4fie_A 231 EGGALTDIVTHT--RMNEEQIAAVCLAVLQALSVLH---AQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVP--R 303 (423)
T ss_dssp TTEEHHHHHHHS--CCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSTTTEEECTTCCEEECCCTTCEECCSSCC--C
T ss_pred CCCcHHHHHhcc--CCCHHHHHHHHHHHHHHHHHHH---HCCeecccCCHHHEEEcCCCCEEEecCccceECCCCCc--c
Confidence 999999998754 5899999999999999999999 99999999999999999999999999999987643322 2
Q ss_pred ecccccCCCCCCccccCCCCCCCchhHHHHHHHHHHHHcCCCCCcccccCcchHhHhhhhhcCCccchhhcccccCchhh
Q 002021 841 QTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFTGKKPTDEIFNGEMTLKHWVNDWLPISTMEVVDANLLSQEDI 920 (979)
Q Consensus 841 ~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 920 (979)
....+||+.|||||++.+..|+.++||||+||++|||++|+.||..... ......+....+.
T Consensus 304 ~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~--~~~~~~i~~~~~~---------------- 365 (423)
T 4fie_A 304 RKSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPP--LKAMKMIRDNLPP---------------- 365 (423)
T ss_dssp BCCCEECTTTCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCH--HHHHHHHHHSCCC----------------
T ss_pred ccccccCcCcCCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCH--HHHHHHHHcCCCC----------------
Confidence 3557899999999999999999999999999999999999999965221 1111111111000
Q ss_pred hhHHHHHHHHHHHHHHHhccccCcCCCCCHHHHHHH
Q 002021 921 HFVAKEQCVSFVFNLAMECTMEFPKQRINAKEIVTK 956 (979)
Q Consensus 921 ~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~eil~~ 956 (979)
....+..+++++.+|+.+||+.||++|||+.|+++|
T Consensus 366 ~~~~~~~~s~~~~dli~~~L~~dP~~R~ta~ell~H 401 (423)
T 4fie_A 366 RLKNLHKVSPSLKGFLDRLLVRDPAQRATAAELLKH 401 (423)
T ss_dssp CCSCTTSSCHHHHHHHHHHSCSSTTTSCCHHHHTTC
T ss_pred CCcccccCCHHHHHHHHHHcCCChhHCcCHHHHhcC
Confidence 001123456679999999999999999999999886
No 30
>3fpq_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase, ATP-BIND kinase, nucleotide-binding, phosphoprotein; 1.80A {Rattus norvegicus}
Probab=100.00 E-value=8e-49 Score=420.55 Aligned_cols=245 Identities=24% Similarity=0.371 Sum_probs=197.1
Q ss_pred CCCceeeeecceEEEEEE-cCCCcEEEEEEecccc--ccchhcHHHHHHHHHhcCCCCeeeEEEeecc----CCeeEEEE
Q 002021 685 SENNLIGRGGFGSVYKAS-LGDGMEVAVKVFTSQC--GRAFKSFDVECEIMKSIRHRNLIKVISSCSN----EEFKALVL 757 (979)
Q Consensus 685 ~~~~~lG~G~~g~Vy~~~-~~~~~~vAvK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~----~~~~~lv~ 757 (979)
+..+.||+|+||+||+|. ..+++.||||++.... ....+.|.+|++++++++|||||+++++|.+ ++..|+||
T Consensus 29 ~~~~~iG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~~~~~lvm 108 (290)
T 3fpq_A 29 KFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIVLVT 108 (290)
T ss_dssp EEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEEEETTEEEEEEEE
T ss_pred EeeeEEecCcCcEEEEEEECCCCeEEEEEEEchhhCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEeeccCCCcEEEEEE
Confidence 456689999999999995 4578999999986442 2345678999999999999999999999854 45689999
Q ss_pred EecCCCccceeeccCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCC--eEecCCCCCCEEeC-CCCcEEEEeeccccccCC
Q 002021 758 EYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGYSAP--VIHCDLKPSNVLLD-DNMVAHLSDFSIAKMLTG 834 (979)
Q Consensus 758 E~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~--i~H~Dik~~NIll~-~~~~~kl~Dfg~~~~~~~ 834 (979)
|||++|+|.+++.+.+ .+++..+..++.||+.||+||| +++ |+||||||+|||++ +++.+||+|||+|+....
T Consensus 109 Ey~~gg~L~~~l~~~~-~l~~~~~~~~~~qi~~aL~ylH---~~~~~IiHRDlKp~NILl~~~~g~vKl~DFGla~~~~~ 184 (290)
T 3fpq_A 109 ELMTSGTLKTYLKRFK-VMKIKVLRSWCRQILKGLQFLH---TRTPPIIHRDLKCDNIFITGPTGSVKIGDLGLATLKRA 184 (290)
T ss_dssp ECCCSCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHH---TSSSCCCCCCCCGGGEEESSTTSCEEECCTTGGGGCCT
T ss_pred eCCCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---HCCCCEEecccChhheeEECCCCCEEEEeCcCCEeCCC
Confidence 9999999999997643 6899999999999999999999 777 99999999999998 489999999999986432
Q ss_pred CCCcceecccccCCCCCCccccCCCCCCCchhHHHHHHHHHHHHcCCCCCcccccCcchHhHhhhhhcCCccchhhcccc
Q 002021 835 EDQSMIQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFTGKKPTDEIFNGEMTLKHWVNDWLPISTMEVVDANL 914 (979)
Q Consensus 835 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 914 (979)
. .....+||+.|||||++.+ .|++++||||+||++|||+||+.||..................
T Consensus 185 ~----~~~~~~GTp~YmAPE~~~~-~y~~~~DiwSlGvilyelltg~~Pf~~~~~~~~~~~~i~~~~~------------ 247 (290)
T 3fpq_A 185 S----FAKAVIGTPEFMAPEMYEE-KYDESVDVYAFGMCMLEMATSEYPYSECQNAAQIYRRVTSGVK------------ 247 (290)
T ss_dssp T----SBEESCSSCCCCCGGGGGT-CCCTHHHHHHHHHHHHHHHHSSCTTTTCSSHHHHHHHHTTTCC------------
T ss_pred C----ccCCcccCccccCHHHcCC-CCCcHHHHHHHHHHHHHHHHCCCCCCCCCcHHHHHHHHHcCCC------------
Confidence 2 2245689999999998864 6999999999999999999999999653221111111100000
Q ss_pred cCchhhhhHHHHHHHHHHHHHHHhccccCcCCCCCHHHHHHH
Q 002021 915 LSQEDIHFVAKEQCVSFVFNLAMECTMEFPKQRINAKEIVTK 956 (979)
Q Consensus 915 ~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~eil~~ 956 (979)
....+..+++++.+++.+||+.||++|||++|+++|
T Consensus 248 ------~~~~~~~~~~~~~~li~~~L~~dP~~R~s~~e~l~H 283 (290)
T 3fpq_A 248 ------PASFDKVAIPEVKEIIEGCIRQNKDERYSIKDLLNH 283 (290)
T ss_dssp ------CGGGGGCCCHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred ------CCCCCccCCHHHHHHHHHHccCChhHCcCHHHHhcC
Confidence 011122345678999999999999999999999876
No 31
>3hyh_A Carbon catabolite-derepressing protein kinase; kinase domain, transferase, ATP-binding, carbohydrate metabo kinase, membrane; 2.20A {Saccharomyces cerevisiae} PDB: 3dae_A 2fh9_A 3mn3_A
Probab=100.00 E-value=6.8e-49 Score=417.18 Aligned_cols=246 Identities=23% Similarity=0.366 Sum_probs=191.9
Q ss_pred CCCCCCceeeeecceEEEEEE-cCCCcEEEEEEecccc---ccchhcHHHHHHHHHhcCCCCeeeEEEeeccCCeeEEEE
Q 002021 682 DGFSENNLIGRGGFGSVYKAS-LGDGMEVAVKVFTSQC---GRAFKSFDVECEIMKSIRHRNLIKVISSCSNEEFKALVL 757 (979)
Q Consensus 682 ~~~~~~~~lG~G~~g~Vy~~~-~~~~~~vAvK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 757 (979)
++|++.+.||+|+||+||+|. ..+|+.||||++.+.. ....+.+.+|++++++++|||||++++++.+++..|+||
T Consensus 13 g~Y~i~~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~~~~~ivm 92 (275)
T 3hyh_A 13 GNYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIKSKDEIIMVI 92 (275)
T ss_dssp -CCEEEEEEEC---CCEEEEECTTTCCEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred eCeEEEEEEecCcCeEEEEEEECCCCCEEEEEEEeHHHcCCHHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEEEE
Confidence 689999999999999999995 4579999999986542 233467889999999999999999999999999999999
Q ss_pred EecCCCccceeeccCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCEEeCCCCcEEEEeeccccccCCCCC
Q 002021 758 EYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFSIAKMLTGEDQ 837 (979)
Q Consensus 758 E~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~i~H~Dik~~NIll~~~~~~kl~Dfg~~~~~~~~~~ 837 (979)
||+ +|+|.+++.+.+ .+++.++..++.||+.||+||| +++|+||||||+|||+++++.+||+|||+|+......
T Consensus 93 Ey~-~g~L~~~l~~~~-~l~e~~~~~~~~qi~~al~ylH---~~~IiHRDiKP~NILl~~~~~vkl~DFGla~~~~~~~- 166 (275)
T 3hyh_A 93 EYA-GNELFDYIVQRD-KMSEQEARRFFQQIISAVEYCH---RHKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGN- 166 (275)
T ss_dssp ECC-CEEHHHHHHHSC-SCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCTTTEEECTTCCEEECCSSCC--------
T ss_pred eCC-CCCHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHH---HCCcccccCChHHeEECCCCCEEEeecCCCeecCCCC-
Confidence 999 679999987654 6999999999999999999999 9999999999999999999999999999998754322
Q ss_pred cceecccccCCCCCCccccCCCCC-CCchhHHHHHHHHHHHHcCCCCCcccccCcchHhHhhhhhcCCccchhhcccccC
Q 002021 838 SMIQTQTLATIGYMAPEYGREGRV-SANGDVYSFGIMLMETFTGKKPTDEIFNGEMTLKHWVNDWLPISTMEVVDANLLS 916 (979)
Q Consensus 838 ~~~~~~~~gt~~y~aPE~~~~~~~-~~~~DvwslG~il~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 916 (979)
.....+||+.|||||++.+..+ ++++||||+||++|||+||+.||...... ..+.......
T Consensus 167 --~~~~~~GT~~Y~APE~~~~~~y~~~~~DiwSlGvily~lltg~~PF~~~~~~-~~~~~i~~~~--------------- 228 (275)
T 3hyh_A 167 --FLKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDESIP-VLFKNISNGV--------------- 228 (275)
T ss_dssp ----------CTTSCHHHHSSSSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHH-HHHHHHHHTC---------------
T ss_pred --ccCCeeECcccCChhhhcCCCCCCChhhhHHHHHHHHHHHHCCCCCCCCCHH-HHHHHHHcCC---------------
Confidence 2345689999999999988775 58999999999999999999999752111 1111111100
Q ss_pred chhhhhHHHHHHHHHHHHHHHhccccCcCCCCCHHHHHHH
Q 002021 917 QEDIHFVAKEQCVSFVFNLAMECTMEFPKQRINAKEIVTK 956 (979)
Q Consensus 917 ~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~eil~~ 956 (979)
...+..+++++.+++.+|++.||++|||++|+++|
T Consensus 229 -----~~~p~~~s~~~~~li~~~L~~dP~~R~s~~eil~h 263 (275)
T 3hyh_A 229 -----YTLPKFLSPGAAGLIKRMLIVNPLNRISIHEIMQD 263 (275)
T ss_dssp -----CCCCTTSCHHHHHHHHHHSCSSGGGSCCHHHHHHC
T ss_pred -----CCCCCCCCHHHHHHHHHHccCChhHCcCHHHHHcC
Confidence 00112345678999999999999999999999986
No 32
>4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron}
Probab=100.00 E-value=1.8e-47 Score=468.87 Aligned_cols=490 Identities=19% Similarity=0.195 Sum_probs=299.8
Q ss_pred CCCCeeeccCCcccccCCccccccCcccEEec-ccccccccCCccccCCCCCcEEEccCCccCch---hhhhhhccCCcc
Q 002021 96 SSLQSLNLSFNRLFGSIPSAIFTTYTLKYVCL-RGNQLSGTFPSFISNKSSLQHLDLSSNALSGE---IRANICREIPRE 171 (979)
Q Consensus 96 ~~L~~L~L~~n~~~~~~p~~~~~l~~L~~L~L-~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~---~~~~~~~~ip~~ 171 (979)
.+++.|+|++|+++|.+|++++.+++|++|+| ++|.++|..|...... .++++...+... .........|.
T Consensus 323 ~~V~~L~Ls~~~L~G~ip~~l~~L~~L~~LdLss~N~lsG~~~~~~~~~----~~~l~~~~l~~lr~~~~~~~l~~~~~- 397 (876)
T 4ecn_A 323 GRVTGLSLAGFGAKGRVPDAIGQLTELKVLSFGTHSETVSGRLFGDEEL----TPDMSEERKHRIRMHYKKMFLDYDQR- 397 (876)
T ss_dssp SCEEEEECTTTCCEEEECGGGGGCTTCCEEESCCTTHHHHTTCBTTBCC----CSSCCHHHHHHHHTHHHHHHTCCCGG-
T ss_pred CCEEEEECccCCCCCcCchHHhccccceEeeeccccccccccccccccc----ccccchhHHHHHHHhhhhhhhccCcc-
Confidence 46777888888888888888888888888888 7777777644321111 000000000000 00000000000
Q ss_pred cCCCCccceeecccccccccccccccCCCCCCceecCC--CeeeecCCccccccCccceeeccCCCCcC-----------
Q 002021 172 FGNLPELELMSLAANNLQGKIPLKIGNLRNLEKLDIGD--NKLVGIAPIAIFNVSTLKILGLQDNSLSG----------- 238 (979)
Q Consensus 172 l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~--N~l~~~~p~~l~~l~~L~~L~L~~N~l~~----------- 238 (979)
..+..+....+..+. ...+........++.+.++. |++++ +|..|.++++|+.|+|++|+|++
T Consensus 398 -~~~s~l~~~~l~~~~--~~~~i~~~~~l~l~~l~l~~~~N~L~~-IP~~l~~L~~L~~L~Ls~N~Lsg~~i~~~~~~~s 473 (876)
T 4ecn_A 398 -LNLSDLLQDAINRNP--EMKPIKKDSRISLKDTQIGNLTNRITF-ISKAIQRLTKLQIIYFANSPFTYDNIAVDWEDAN 473 (876)
T ss_dssp -GGSCHHHHHHHHTCT--TSCCCCCCCCCCCCTTTTTCCSCEEEE-ECGGGGGCTTCCEEEEESCCCCGGGBSSSCSCTT
T ss_pred -hhhhHHHHHHhhhCc--cccccccccccchhhceeccccCcccc-hhHHHhcCCCCCEEECcCCcCCCCcccccccccc
Confidence 000000000000000 00011111222333333333 55555 35555555555555555555555
Q ss_pred -------CCcccccCCCCCcCEEEccCCccccccCcccccCCCCcEEeccccc-ccc-ccCccccccc-------cccce
Q 002021 239 -------CLSSIGYARLPNLEILSLWGNNFSGTIPRFIFNASKLSILDLEGNS-FSG-FIPNTFGNLR-------NLSWL 302 (979)
Q Consensus 239 -------~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~-l~~-~~~~~~~~l~-------~L~~L 302 (979)
++....|..+++|++|+|++|++.+.+|..++++++|++|+|++|+ +++ .+|..++.++ +|++|
T Consensus 474 ~n~~~g~iP~~l~f~~L~~L~~L~Ls~N~l~~~iP~~l~~L~~L~~L~Ls~N~~lsg~~iP~~i~~L~~~~~~l~~L~~L 553 (876)
T 4ecn_A 474 SDYAKQYENEELSWSNLKDLTDVELYNCPNMTQLPDFLYDLPELQSLNIACNRGISAAQLKADWTRLADDEDTGPKIQIF 553 (876)
T ss_dssp SHHHHHHTTSCCCGGGCTTCCEEEEESCTTCCSCCGGGGGCSSCCEEECTTCTTSCHHHHHHHHHHHHHCTTTTTTCCEE
T ss_pred cccccccCChhhhhccCCCCCEEECcCCCCCccChHHHhCCCCCCEEECcCCCCcccccchHHHHhhhhcccccCCccEE
Confidence 3333334466666666666666666666666666777777777776 666 5666555554 67777
Q ss_pred eccccccccccchhhhhhcccCCCCccEEEccCCCCcccCCccccccccccccEEEccCccccCCCCccccCCCc-ccEE
Q 002021 303 VLSDNYLTSSTQELSFLSSLSNCKFLKYFDLSYNPLYRILPRTTVGNLSHSLEEFKMSNCNISGGIPEEISNLTN-LRTI 381 (979)
Q Consensus 303 ~Ls~N~l~~~~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~~L~~L~L~~n~i~~~~p~~l~~l~~-L~~L 381 (979)
+|++|+++.+|.. ..+.++++|++|+|++|++..++ .++. .++|+.|+|++|+++ .+|..+..+++ |+.|
T Consensus 554 ~Ls~N~L~~ip~~----~~l~~L~~L~~L~Ls~N~l~~lp---~~~~-L~~L~~L~Ls~N~l~-~lp~~l~~l~~~L~~L 624 (876)
T 4ecn_A 554 YMGYNNLEEFPAS----ASLQKMVKLGLLDCVHNKVRHLE---AFGT-NVKLTDLKLDYNQIE-EIPEDFCAFTDQVEGL 624 (876)
T ss_dssp ECCSSCCCBCCCH----HHHTTCTTCCEEECTTSCCCBCC---CCCT-TSEESEEECCSSCCS-CCCTTSCEECTTCCEE
T ss_pred EeeCCcCCccCCh----hhhhcCCCCCEEECCCCCcccch---hhcC-CCcceEEECcCCccc-cchHHHhhccccCCEE
Confidence 7777776654430 12556666777777777666432 2222 246777777777777 66667777777 7777
Q ss_pred EecCCCCCchhHHhhhcCCC--CcEEEecCcccCCCccccc---c--CCCCCceEecCCCcccccCCccccCCCcCceEe
Q 002021 382 YLGGNKLNGSILITLSKLQK--LQDLGLKDNKLEGSIPYDI---C--NLAELYRLDLDGNKLSGSIPACFSNLTSLRIVS 454 (979)
Q Consensus 382 ~L~~N~l~~~~~~~l~~l~~--L~~L~L~~N~l~~~~p~~~---~--~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~ 454 (979)
+|++|+++ .+|..+..++. |+.|++++|++.+.+|... . .+++|+.|+|++|+++...+..+..+++|+.|+
T Consensus 625 ~Ls~N~L~-~lp~~~~~~~~~~L~~L~Ls~N~l~g~ip~l~~~l~~~~~~~L~~L~Ls~N~L~~lp~~~~~~l~~L~~L~ 703 (876)
T 4ecn_A 625 GFSHNKLK-YIPNIFNAKSVYVMGSVDFSYNKIGSEGRNISCSMDDYKGINASTVTLSYNEIQKFPTELFATGSPISTII 703 (876)
T ss_dssp ECCSSCCC-SCCSCCCTTCSSCEEEEECCSSCTTTTSSSCSSCTTTCCCCCEEEEECCSSCCCSCCHHHHHTTCCCSEEE
T ss_pred ECcCCCCC-cCchhhhccccCCCCEEECcCCcCCCccccchhhhccccCCCcCEEEccCCcCCccCHHHHccCCCCCEEE
Confidence 77777777 45556655543 7777777777776555322 2 334788888888888743333344778888888
Q ss_pred cCCCccccccccccCc--------CCCcEEEeccccccCCCccccc--cccccceEeccCCccCcccchhhcCCccccee
Q 002021 455 LGSNELTSIPLTFWNL--------KDILNLNFSSNFLTGSLPLEIG--SLKVLVGIDLSRNNFSGVIPTEIGGLKNLEYL 524 (979)
Q Consensus 455 L~~N~l~~lp~~~~~l--------~~L~~L~ls~N~l~~~~p~~~~--~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L 524 (979)
|++|+|+.+|..+... ++|+.|+|++|+++ .+|..+. .+++|+.|+|++|+|++ +|..+..+++|+.|
T Consensus 704 Ls~N~L~~ip~~~~~~~~~~l~nl~~L~~L~Ls~N~L~-~lp~~l~~~~l~~L~~L~Ls~N~L~~-lp~~l~~L~~L~~L 781 (876)
T 4ecn_A 704 LSNNLMTSIPENSLKPKDGNYKNTYLLTTIDLRFNKLT-SLSDDFRATTLPYLSNMDVSYNCFSS-FPTQPLNSSQLKAF 781 (876)
T ss_dssp CCSCCCSCCCTTSSSCTTSCCTTGGGCCEEECCSSCCC-CCCGGGSTTTCTTCCEEECCSSCCSS-CCCGGGGCTTCCEE
T ss_pred CCCCcCCccChHHhccccccccccCCccEEECCCCCCc-cchHHhhhccCCCcCEEEeCCCCCCc-cchhhhcCCCCCEE
Confidence 8888888777755432 27888888888888 5777776 78888888888888886 67778888888888
Q ss_pred ecCC------ccccCCCCCcccccccccccccccccccccCCccccCccccCeEeccCCcccccCCCCC-CCCCcccccc
Q 002021 525 FLGY------NRLQGSIPNSFGDLISLKFLNLSNNNLSGVIPASLEKLSYLEDLNLSFNQLEGKIPRGG-SFGNFSAQSF 597 (979)
Q Consensus 525 ~Ls~------N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~-~~~~~~~~~~ 597 (979)
+|++ |++.+.+|..|.++++|+.|+|++|+| +.+|..+. ++|+.|+|++|++....+... .........+
T Consensus 782 ~Ls~N~~ls~N~l~~~ip~~l~~L~~L~~L~Ls~N~L-~~Ip~~l~--~~L~~LdLs~N~l~~i~~~~~~~~~~~~~~~L 858 (876)
T 4ecn_A 782 GIRHQRDAEGNRILRQWPTGITTCPSLIQLQIGSNDI-RKVDEKLT--PQLYILDIADNPNISIDVTSVCPYIEAGMYVL 858 (876)
T ss_dssp ECCCCBCTTCCBCCCCCCTTGGGCSSCCEEECCSSCC-CBCCSCCC--SSSCEEECCSCTTCEEECGGGHHHHHTTCCEE
T ss_pred ECCCCCCcccccccccChHHHhcCCCCCEEECCCCCC-CccCHhhc--CCCCEEECCCCCCCccChHHccccccchheee
Confidence 8865 889999999999999999999999999 68888866 699999999999976544311 0111233455
Q ss_pred cCCcc--ccCCCCC
Q 002021 598 EGNEL--LCGSPNL 609 (979)
Q Consensus 598 ~~N~~--~c~~p~~ 609 (979)
.+|+. .+|+|..
T Consensus 859 ~~n~~~~I~gC~~L 872 (876)
T 4ecn_A 859 LYDKTQDIRGCDAL 872 (876)
T ss_dssp ECCTTSEEESCGGG
T ss_pred cCCCccccCCCCCc
Confidence 55544 4466643
No 33
>4g8a_A TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, immune system; HET: NAG LP4 LP5 DAO MYR KDO; 2.40A {Homo sapiens} PDB: 3fxi_A*
Probab=100.00 E-value=9.9e-47 Score=459.09 Aligned_cols=488 Identities=22% Similarity=0.174 Sum_probs=383.6
Q ss_pred CcEEEEEecCCCccccCCCCCcCCCCCCeeeccCCcccccCCccccccCcccEEecccccccccCCccccCCCCCcEEEc
Q 002021 72 QRVTVLNISSLNLTGTIPSQLGNLSSLQSLNLSFNRLFGSIPSAIFTTYTLKYVCLRGNQLSGTFPSFISNKSSLQHLDL 151 (979)
Q Consensus 72 ~~v~~l~l~~~~l~g~~~~~l~~l~~L~~L~L~~n~~~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L 151 (979)
..+++|||++|+|++..+.+|.++++|++|||++|+|++..|.+|..+++|++|+|++|+|++..|..|+++++|++|+|
T Consensus 52 ~~~~~LdLs~N~i~~l~~~~f~~l~~L~~L~Ls~N~i~~i~~~~f~~L~~L~~L~Ls~N~l~~l~~~~f~~L~~L~~L~L 131 (635)
T 4g8a_A 52 FSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVA 131 (635)
T ss_dssp TTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECGGGGTTCTTCCEEEC
T ss_pred cCCCEEEeeCCCCCCCCHHHHhCCCCCCEEECCCCcCCCcChhHhcCCCCCCEEEccCCcCCCCCHHHhcCCCCCCEEEC
Confidence 36889999999999777778999999999999999999877888999999999999999999887788999999999999
Q ss_pred cCCccCchhhhhhhccCCcccCCCCccceeecccccccc-cccccccCCCCCCceecCCCeeeecCCccccccCccc---
Q 002021 152 SSNALSGEIRANICREIPREFGNLPELELMSLAANNLQG-KIPLKIGNLRNLEKLDIGDNKLVGIAPIAIFNVSTLK--- 227 (979)
Q Consensus 152 s~N~l~~~~~~~~~~~ip~~l~~l~~L~~L~L~~N~l~~-~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~--- 227 (979)
++|++++. .+..|+++++|++|+|++|.+++ .+|..++.+++|++|+|++|+|+++.+..|..+.+++
T Consensus 132 s~N~l~~l--------~~~~~~~L~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~l~~L~~l~~~~ 203 (635)
T 4g8a_A 132 VETNLASL--------ENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTDLRVLHQMPLLN 203 (635)
T ss_dssp TTSCCCCS--------TTCCCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECCSSCCCEECGGGGHHHHTCTTCC
T ss_pred CCCcCCCC--------ChhhhhcCcccCeeccccCccccCCCchhhccchhhhhhcccCccccccccccccchhhhhhhh
Confidence 99999753 33568999999999999999975 4678889999999999999999999888888776554
Q ss_pred -eeeccCCCCcCCCcccccCCCCCcCEEEccCCcccc-ccCcccccCCCCcEEeccccccc------c------------
Q 002021 228 -ILGLQDNSLSGCLSSIGYARLPNLEILSLWGNNFSG-TIPRFIFNASKLSILDLEGNSFS------G------------ 287 (979)
Q Consensus 228 -~L~L~~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~-~~p~~l~~l~~L~~L~Ls~N~l~------~------------ 287 (979)
.++++.|.++...+.. .....++.+++++|.... ..+..+..+..++...+..+... .
T Consensus 204 ~~~~ls~n~l~~i~~~~--~~~~~~~~l~l~~n~~~~~~~~~~~~~l~~l~~~~l~~~~~~~~~~l~~~~~~~~~~~~~l 281 (635)
T 4g8a_A 204 LSLDLSLNPMNFIQPGA--FKEIRLHKLTLRNNFDSLNVMKTCIQGLAGLEVHRLVLGEFRNEGNLEKFDKSALEGLCNL 281 (635)
T ss_dssp CEEECTTCCCCEECTTT--TTTCEEEEEEEESCCSSHHHHHHHHHTTTTCEEEEEEEECCTTSCCCSCCCTTTTGGGGGS
T ss_pred hhhhcccCcccccCccc--ccchhhhhhhhhcccccccccchhhcCCcccccccccccccccccccccccccccccccch
Confidence 5788889887655432 244566777887775542 22334444555554444322211 1
Q ss_pred ---------------ccCccccccccccceeccccccccccchhhhhhcccCCCCccEEEccCCCCcccCCccccccccc
Q 002021 288 ---------------FIPNTFGNLRNLSWLVLSDNYLTSSTQELSFLSSLSNCKFLKYFDLSYNPLYRILPRTTVGNLSH 352 (979)
Q Consensus 288 ---------------~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~ 352 (979)
..+..+..+.+++.+++.+|.+.... .+.....|+.|++++|.+..+.... ..
T Consensus 282 ~~~~l~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~~~-------~~~~~~~L~~L~l~~~~~~~~~~~~-----l~ 349 (635)
T 4g8a_A 282 TIEEFRLAYLDYYLDGIIDLFNCLTNVSSFSLVSVTIERVK-------DFSYNFGWQHLELVNCKFGQFPTLK-----LK 349 (635)
T ss_dssp EEEEEEEECCCSCEEECTTTTGGGTTCSEEEEESCEEEECG-------GGGSCCCCSEEEEESCEESSCCCCB-----CT
T ss_pred hhhhhhhhhhcccccchhhhhhhhccccccccccccccccc-------ccccchhhhhhhcccccccCcCccc-----ch
Confidence 11223444556666666666665443 2455677888888888876654432 34
Q ss_pred cccEEEccCccccCCCCccccCCCcccEEEecCCCCCc--hhHHhhhcCCCCcEEEecCcccCCCccccccCCCCCceEe
Q 002021 353 SLEEFKMSNCNISGGIPEEISNLTNLRTIYLGGNKLNG--SILITLSKLQKLQDLGLKDNKLEGSIPYDICNLAELYRLD 430 (979)
Q Consensus 353 ~L~~L~L~~n~i~~~~p~~l~~l~~L~~L~L~~N~l~~--~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ 430 (979)
.|+.+++.+|.+... .....+++|+.|++++|.+.. ..+..+..+.+|+.+++..|.+.. .+..+..+++|+.++
T Consensus 350 ~L~~l~l~~n~~~~~--~~~~~l~~L~~L~ls~n~l~~~~~~~~~~~~~~~L~~L~~~~~~~~~-~~~~~~~l~~L~~l~ 426 (635)
T 4g8a_A 350 SLKRLTFTSNKGGNA--FSEVDLPSLEFLDLSRNGLSFKGCCSQSDFGTISLKYLDLSFNGVIT-MSSNFLGLEQLEHLD 426 (635)
T ss_dssp TCCEEEEESCCSCCB--CCCCBCTTCCEEECCSSCCBEEEECCHHHHSCSCCCEEECCSCSEEE-ECSCCTTCTTCCEEE
T ss_pred hhhhcccccccCCCC--cccccccccccchhhccccccccccccchhhhhhhhhhhcccccccc-ccccccccccccchh
Confidence 688888888877643 345578899999999998864 445677788899999999988874 566788889999999
Q ss_pred cCCCcccccCC-ccccCCCcCceEecCCCccccc-cccccCcCCCcEEEecccccc-CCCccccccccccceEeccCCcc
Q 002021 431 LDGNKLSGSIP-ACFSNLTSLRIVSLGSNELTSI-PLTFWNLKDILNLNFSSNFLT-GSLPLEIGSLKVLVGIDLSRNNF 507 (979)
Q Consensus 431 Ls~N~l~~~~~-~~~~~l~~L~~L~L~~N~l~~l-p~~~~~l~~L~~L~ls~N~l~-~~~p~~~~~l~~L~~L~Ls~N~l 507 (979)
++.|+.....+ ..|..+++++.+++++|+++.+ |..+..++.++.|++++|.+. +..|..|..+++|+.|||++|+|
T Consensus 427 l~~~~~~~~~~~~~~~~l~~l~~l~ls~n~l~~~~~~~~~~~~~L~~L~Ls~N~~~~~~~~~~~~~l~~L~~L~Ls~N~L 506 (635)
T 4g8a_A 427 FQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQL 506 (635)
T ss_dssp CTTSEEESTTSSCTTTTCTTCCEEECTTSCCEECCTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCC
T ss_pred hhhccccccccccccccccccccccccccccccccccccccchhhhhhhhhhcccccccCchhhhhccccCEEECCCCcc
Confidence 99888765544 5678899999999999999855 456778899999999998754 45788899999999999999999
Q ss_pred CcccchhhcCCcccceeecCCccccCCCCCcccccccccccccccccccccCCccccCc-cccCeEeccCCcccccCC
Q 002021 508 SGVIPTEIGGLKNLEYLFLGYNRLQGSIPNSFGDLISLKFLNLSNNNLSGVIPASLEKL-SYLEDLNLSFNQLEGKIP 584 (979)
Q Consensus 508 ~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l-~~L~~L~L~~N~l~~~~p 584 (979)
++.+|..|.++++|++|+|++|+|++..|..|.++++|++|||++|+|++..|..+..+ ++|+.|+|++|+|+|...
T Consensus 507 ~~l~~~~f~~l~~L~~L~Ls~N~l~~l~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~~L~~L~L~~Np~~C~C~ 584 (635)
T 4g8a_A 507 EQLSPTAFNSLSSLQVLNMSHNNFFSLDTFPYKCLNSLQVLDYSLNHIMTSKKQELQHFPSSLAFLNLTQNDFACTCE 584 (635)
T ss_dssp CEECTTTTTTCTTCCEEECTTSCCCBCCCGGGTTCTTCCEEECTTSCCCBCCSSCTTCCCTTCCEEECTTCCBCCSGG
T ss_pred CCcChHHHcCCCCCCEEECCCCcCCCCChhHHhCCCCCCEEECCCCcCCCCCHHHHHhhhCcCCEEEeeCCCCcccCC
Confidence 98889999999999999999999998888889999999999999999999999999888 689999999999998765
No 34
>2z7x_B TOLL-like receptor 1, variable lymphocyte recepto; TLR2, TLR1, lipopeptide, innate immunity, glycoPro immune response, inflammatory response, leucine-rich repeat membrane, receptor; HET: NAG NDG MAN BMA PCJ; 2.10A {Homo sapiens}
Probab=100.00 E-value=1.3e-47 Score=454.71 Aligned_cols=441 Identities=23% Similarity=0.245 Sum_probs=339.3
Q ss_pred CcEEEEEecCCCccccCCCCCcCCCCCCeeeccCCcccccCCccccccCcccEEecccccccccCCccccCCCCCcEEEc
Q 002021 72 QRVTVLNISSLNLTGTIPSQLGNLSSLQSLNLSFNRLFGSIPSAIFTTYTLKYVCLRGNQLSGTFPSFISNKSSLQHLDL 151 (979)
Q Consensus 72 ~~v~~l~l~~~~l~g~~~~~l~~l~~L~~L~L~~n~~~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L 151 (979)
.+++.|+|++|.+++..|..+.++++|++|+|++|++++..|..++.+++|++|+|++|+++ .+|.. .+++|++|+|
T Consensus 21 ~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~-~lp~~--~l~~L~~L~L 97 (520)
T 2z7x_B 21 QKTTILNISQNYISELWTSDILSLSKLRILIISHNRIQYLDISVFKFNQELEYLDLSHNKLV-KISCH--PTVNLKHLDL 97 (520)
T ss_dssp TTCSEEECCSSCCCCCCHHHHTTCTTCCEEECCSSCCCEEEGGGGTTCTTCCEEECCSSCCC-EEECC--CCCCCSEEEC
T ss_pred ccccEEECCCCcccccChhhccccccccEEecCCCccCCcChHHhhcccCCCEEecCCCcee-ecCcc--ccCCccEEec
Confidence 67999999999999888889999999999999999999988999999999999999999999 56666 8999999999
Q ss_pred cCCccCchhhhhhhccCCcccCCCCccceeecccccccccccccccCCCCC--CceecCCCee--eecCCccccccC-cc
Q 002021 152 SSNALSGEIRANICREIPREFGNLPELELMSLAANNLQGKIPLKIGNLRNL--EKLDIGDNKL--VGIAPIAIFNVS-TL 226 (979)
Q Consensus 152 s~N~l~~~~~~~~~~~ip~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L--~~L~Ls~N~l--~~~~p~~l~~l~-~L 226 (979)
++|.+++. .+|..|+++++|++|+|++|++++ ..++.+++| ++|++++|++ .+..|..+..+. +.
T Consensus 98 ~~N~l~~~-------~~p~~~~~l~~L~~L~L~~n~l~~---~~~~~l~~L~L~~L~l~~n~l~~~~~~~~~l~~l~~~~ 167 (520)
T 2z7x_B 98 SFNAFDAL-------PICKEFGNMSQLKFLGLSTTHLEK---SSVLPIAHLNISKVLLVLGETYGEKEDPEGLQDFNTES 167 (520)
T ss_dssp CSSCCSSC-------CCCGGGGGCTTCCEEEEEESSCCG---GGGGGGTTSCEEEEEEEECTTTTSSCCTTTTTTCCEEE
T ss_pred cCCccccc-------cchhhhccCCcceEEEecCcccch---hhccccccceeeEEEeecccccccccccccccccccce
Confidence 99999863 378899999999999999999986 457778888 9999999999 888888888776 45
Q ss_pred ceeeccCCCCcCCCcccccCCCCCcCEEEccCCc-------cccccCcccccCCCCcEEeccccccccccCcccc---cc
Q 002021 227 KILGLQDNSLSGCLSSIGYARLPNLEILSLWGNN-------FSGTIPRFIFNASKLSILDLEGNSFSGFIPNTFG---NL 296 (979)
Q Consensus 227 ~~L~L~~N~l~~~~~~~~~~~l~~L~~L~L~~N~-------l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~~~~~~---~l 296 (979)
..+++++|.+.+......+..+++|+.|++++|. +.+.+| .+..+++|+.|++++|.+++..+..+. ..
T Consensus 168 l~l~l~~n~~~~~~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~~-~l~~l~~L~~L~l~~~~l~~~~~~~~~~~~~~ 246 (520)
T 2z7x_B 168 LHIVFPTNKEFHFILDVSVKTVANLELSNIKCVLEDNKCSYFLSILA-KLQTNPKLSNLTLNNIETTWNSFIRILQLVWH 246 (520)
T ss_dssp EEEECCSSSCCCCCCCCCCTTCSEEEECCEEECCSTTTTHHHHHHHH-GGGGCTTCCEEEEEEEEEEHHHHHHHHHHHHT
T ss_pred EEEEeccCcchhhhhhhhhhcccceeeccccccccccccceeecchh-hhccccchhhccccccccCHHHHHHHHHHhhh
Confidence 5678999999887777778889999999999987 777666 778888999999988888764332221 13
Q ss_pred ccccceeccccccc-cccchhhhhhcccCCCCccEEEccCCCCcccCCccccccccccccEEEccCccccCCCCccccCC
Q 002021 297 RNLSWLVLSDNYLT-SSTQELSFLSSLSNCKFLKYFDLSYNPLYRILPRTTVGNLSHSLEEFKMSNCNISGGIPEEISNL 375 (979)
Q Consensus 297 ~~L~~L~Ls~N~l~-~~~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~~L~~L~L~~n~i~~~~p~~l~~l 375 (979)
++|++|++++|+++ .++... +......++.|+.+++++|.+ .++ ...+..+
T Consensus 247 ~~L~~L~l~~n~l~~~~p~~~-~~~~~~~l~~L~~l~l~~n~~-~~p--------------------------~~~~~~~ 298 (520)
T 2z7x_B 247 TTVWYFSISNVKLQGQLDFRD-FDYSGTSLKALSIHQVVSDVF-GFP--------------------------QSYIYEI 298 (520)
T ss_dssp SSCSEEEEEEEEEESCCCCCC-CCCCSCCCCEEEEEEEEECCC-CSC--------------------------THHHHHH
T ss_pred CcccEEEeecccccCccccch-hhcccccCceeEeccccccce-ecc--------------------------hhhhhcc
Confidence 47788888888776 333221 000014555555555555555 221 1223222
Q ss_pred ---CcccEEEecCCCCCchhHHhhhcCCCCcEEEecCcccCCCccccccCCCCCceEecCCCcccc--cCCccccCCCcC
Q 002021 376 ---TNLRTIYLGGNKLNGSILITLSKLQKLQDLGLKDNKLEGSIPYDICNLAELYRLDLDGNKLSG--SIPACFSNLTSL 450 (979)
Q Consensus 376 ---~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~--~~~~~~~~l~~L 450 (979)
++|+.|++++|.+.... .+..+++|++|++++|++.+..|..++.+++|++|++++|++++ .+|..+..+++|
T Consensus 299 ~~~~~L~~L~l~~n~l~~~~--~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~~~l~~L 376 (520)
T 2z7x_B 299 FSNMNIKNFTVSGTRMVHML--CPSKISPFLHLDFSNNLLTDTVFENCGHLTELETLILQMNQLKELSKIAEMTTQMKSL 376 (520)
T ss_dssp HHTCCCSEEEEESSCCCCCC--CCSSCCCCCEEECCSSCCCTTTTTTCCCCSSCCEEECCSSCCCBHHHHHHHHTTCTTC
T ss_pred cccCceeEEEcCCCcccccc--chhhCCcccEEEeECCccChhhhhhhccCCCCCEEEccCCccCccccchHHHhhCCCC
Confidence 45666666666554322 12456667777777777776667777777777777777777775 445667777778
Q ss_pred ceEecCCCcccc-cccc-ccCcCCCcEEEeccccccCCCccccccccccceEeccCCccCcccchhhcCCcccceeecCC
Q 002021 451 RIVSLGSNELTS-IPLT-FWNLKDILNLNFSSNFLTGSLPLEIGSLKVLVGIDLSRNNFSGVIPTEIGGLKNLEYLFLGY 528 (979)
Q Consensus 451 ~~L~L~~N~l~~-lp~~-~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~ 528 (979)
++|++++|+++. +|.. +..+++|+.|++++|++++..|..+. ++|+.|||++|+|+ .+|..+..+++|++|+|++
T Consensus 377 ~~L~Ls~N~l~~~l~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~--~~L~~L~Ls~N~l~-~ip~~~~~l~~L~~L~L~~ 453 (520)
T 2z7x_B 377 QQLDISQNSVSYDEKKGDCSWTKSLLSLNMSSNILTDTIFRCLP--PRIKVLDLHSNKIK-SIPKQVVKLEALQELNVAS 453 (520)
T ss_dssp CEEECCSSCCBCCGGGCSCCCCTTCCEEECCSSCCCGGGGGSCC--TTCCEEECCSSCCC-CCCGGGGGCTTCCEEECCS
T ss_pred CEEECCCCcCCcccccchhccCccCCEEECcCCCCCcchhhhhc--ccCCEEECCCCccc-ccchhhhcCCCCCEEECCC
Confidence 888888887776 7764 66778888888888888777776664 78899999999998 6777777999999999999
Q ss_pred ccccCCCCC-cccccccccccccccccccccCC
Q 002021 529 NRLQGSIPN-SFGDLISLKFLNLSNNNLSGVIP 560 (979)
Q Consensus 529 N~l~~~~p~-~~~~l~~L~~L~Ls~N~l~~~~p 560 (979)
|+|+. +|. .|..+++|++|+|++|++++..+
T Consensus 454 N~l~~-l~~~~~~~l~~L~~L~l~~N~~~c~c~ 485 (520)
T 2z7x_B 454 NQLKS-VPDGIFDRLTSLQKIWLHTNPWDCSCP 485 (520)
T ss_dssp SCCCC-CCTTTTTTCTTCCEEECCSSCBCCCHH
T ss_pred CcCCc-cCHHHhccCCcccEEECcCCCCcccCC
Confidence 99994 555 48899999999999999986543
No 35
>3ubd_A Ribosomal protein S6 kinase alpha-3; kinase-inhibitor complex, induced FIT, transferase-transfera inhibitor complex; HET: SL0; 1.53A {Mus musculus} PDB: 4el9_A* 3g51_A* 2z7q_A* 2z7r_A* 2z7s_A*
Probab=100.00 E-value=6.8e-49 Score=423.00 Aligned_cols=248 Identities=25% Similarity=0.313 Sum_probs=198.3
Q ss_pred CCCCCCceeeeecceEEEEEEc----CCCcEEEEEEecccc--ccchhcHHHHHHHHHhcCCCCeeeEEEeeccCCeeEE
Q 002021 682 DGFSENNLIGRGGFGSVYKASL----GDGMEVAVKVFTSQC--GRAFKSFDVECEIMKSIRHRNLIKVISSCSNEEFKAL 755 (979)
Q Consensus 682 ~~~~~~~~lG~G~~g~Vy~~~~----~~~~~vAvK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 755 (979)
++|++.+.||+|+||+||+|+. .+++.||||++.... ......+.+|++++++++|||||++++++.+++..|+
T Consensus 24 ~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~i 103 (304)
T 3ubd_A 24 SQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVNHPFIVKLHYAFQTEGKLYL 103 (304)
T ss_dssp GGEEEEEEEECGGGCEEEEEEECSSTTTTCEEEEEEEESEEEEEEECC------CCCCCCCCTTEECEEEEEEETTEEEE
T ss_pred cccEEEEEEecCCCeEEEEEEEccCCCCCEEEEEEEEehHHcChHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEE
Confidence 4688999999999999999954 357899999986543 2334568889999999999999999999999999999
Q ss_pred EEEecCCCccceeeccCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCEEeCCCCcEEEEeeccccccCCC
Q 002021 756 VLEYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFSIAKMLTGE 835 (979)
Q Consensus 756 v~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~i~H~Dik~~NIll~~~~~~kl~Dfg~~~~~~~~ 835 (979)
||||++||+|.+++.+.+ .+++.++..++.||+.||+||| +++|+||||||+|||+++++.+||+|||+|+.....
T Consensus 104 vmEy~~gg~L~~~l~~~~-~l~e~~~~~~~~qi~~aL~ylH---~~~IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~~ 179 (304)
T 3ubd_A 104 ILDFLRGGDLFTRLSKEV-MFTEEDVKFYLAELALALDHLH---SLGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDH 179 (304)
T ss_dssp EECCCTTCEEHHHHHHHC-CCCHHHHHHHHHHHHHHHHHHH---HTTCCCSSCCGGGEEECTTSCEEEESSEEEEC----
T ss_pred EEEcCCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---HCCCcCCCCCHHHeEEcCCCCEEecccccceeccCC
Confidence 999999999999997654 6999999999999999999999 999999999999999999999999999999865332
Q ss_pred CCcceecccccCCCCCCccccCCCCCCCchhHHHHHHHHHHHHcCCCCCcccccCcchHhHhhhhhcCCccchhhccccc
Q 002021 836 DQSMIQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFTGKKPTDEIFNGEMTLKHWVNDWLPISTMEVVDANLL 915 (979)
Q Consensus 836 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 915 (979)
. ......+||+.|||||++.+..|+.++||||+||++|||+||+.||......+ .+.......
T Consensus 180 ~--~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyemltG~~PF~~~~~~~-~~~~i~~~~-------------- 242 (304)
T 3ubd_A 180 E--KKAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPFQGKDRKE-TMTMILKAK-------------- 242 (304)
T ss_dssp ---CCCCSCCCCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHH-HHHHHHHCC--------------
T ss_pred C--ccccccccCcccCCHHHhccCCCCCCCcccchHHHHHHHHhCCCCCCCcCHHH-HHHHHHcCC--------------
Confidence 2 22345689999999999999999999999999999999999999997532111 111111100
Q ss_pred CchhhhhHHHHHHHHHHHHHHHhccccCcCCCCCH-----HHHHHH
Q 002021 916 SQEDIHFVAKEQCVSFVFNLAMECTMEFPKQRINA-----KEIVTK 956 (979)
Q Consensus 916 ~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~-----~eil~~ 956 (979)
...+..+++++.+++.+||+.||++|||+ +|+++|
T Consensus 243 ------~~~p~~~s~~~~~li~~~L~~dP~~R~ta~~~~~~eil~H 282 (304)
T 3ubd_A 243 ------LGMPQFLSPEAQSLLRMLFKRNPANRLGAGPDGVEEIKRH 282 (304)
T ss_dssp ------CCCCTTSCHHHHHHHHHHTCSSGGGSTTCSTTTHHHHHTS
T ss_pred ------CCCCCcCCHHHHHHHHHHcccCHHHCCCCCcCCHHHHHcC
Confidence 01123456779999999999999999984 677765
No 36
>4g8a_A TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, immune system; HET: NAG LP4 LP5 DAO MYR KDO; 2.40A {Homo sapiens} PDB: 3fxi_A*
Probab=100.00 E-value=3.3e-46 Score=454.48 Aligned_cols=529 Identities=21% Similarity=0.248 Sum_probs=414.6
Q ss_pred ccCCCCCCCccceeEeeCCCCcEEEEEecCCCccccCCCCCcCCCCCCeeeccCCcccccCCccccccCcccEEeccccc
Q 002021 52 NWNTSTPVCNWTGVACEVHSQRVTVLNISSLNLTGTIPSQLGNLSSLQSLNLSFNRLFGSIPSAIFTTYTLKYVCLRGNQ 131 (979)
Q Consensus 52 ~w~~~~~~c~w~gv~c~~~~~~v~~l~l~~~~l~g~~~~~l~~l~~L~~L~L~~n~~~~~~p~~~~~l~~L~~L~L~~n~ 131 (979)
+|+.+. +..|....|..... ..+.++.+++ .+|+.+- +++++|||++|+|++..|.+|..+++|++|+|++|+
T Consensus 15 ~~~~~~-p~~~~~c~~~~~~~---~~~c~~~~l~-~vP~~lp--~~~~~LdLs~N~i~~l~~~~f~~l~~L~~L~Ls~N~ 87 (635)
T 4g8a_A 15 AANSSI-PESWEPCVEVVPNI---TYQCMELNFY-KIPDNLP--FSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCE 87 (635)
T ss_dssp -----------CCSEEEETTT---EEECTTSCCS-SCCSSSC--TTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCC
T ss_pred cccCCC-CCCCCCccccCCCC---EEECCCCCcC-ccCCCCC--cCCCEEEeeCCCCCCCCHHHHhCCCCCCEEECCCCc
Confidence 454433 23455544442221 2356677787 5776553 479999999999998778899999999999999999
Q ss_pred ccccCCccccCCCCCcEEEccCCccCchhhhhhhccCCcccCCCCccceeecccccccccccccccCCCCCCceecCCCe
Q 002021 132 LSGTFPSFISNKSSLQHLDLSSNALSGEIRANICREIPREFGNLPELELMSLAANNLQGKIPLKIGNLRNLEKLDIGDNK 211 (979)
Q Consensus 132 l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~~ip~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~ 211 (979)
|++..|.+|+++++|++|+|++|+|++. .|..|+++++|++|+|++|++++..+..|+++++|++|+|++|+
T Consensus 88 i~~i~~~~f~~L~~L~~L~Ls~N~l~~l--------~~~~f~~L~~L~~L~Ls~N~l~~l~~~~~~~L~~L~~L~Ls~N~ 159 (635)
T 4g8a_A 88 IQTIEDGAYQSLSHLSTLILTGNPIQSL--------ALGAFSGLSSLQKLVAVETNLASLENFPIGHLKTLKELNVAHNL 159 (635)
T ss_dssp CCEECTTTTTTCTTCCEEECTTCCCCEE--------CGGGGTTCTTCCEEECTTSCCCCSTTCCCTTCTTCCEEECCSSC
T ss_pred CCCcChhHhcCCCCCCEEEccCCcCCCC--------CHHHhcCCCCCCEEECCCCcCCCCChhhhhcCcccCeeccccCc
Confidence 9988888999999999999999999853 23568999999999999999998888889999999999999999
Q ss_pred eeec-CCccccccCccceeeccCCCCcCCCcccccCCCCC----cCEEEccCCccccccCcccccCCCCcEEeccccccc
Q 002021 212 LVGI-APIAIFNVSTLKILGLQDNSLSGCLSSIGYARLPN----LEILSLWGNNFSGTIPRFIFNASKLSILDLEGNSFS 286 (979)
Q Consensus 212 l~~~-~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~l~~----L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~ 286 (979)
+++. .|..+.++++|+.|+|++|+|++..+. .|..+.+ +..++++.|.++...+. ......+..+++++|...
T Consensus 160 l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~-~l~~L~~l~~~~~~~~ls~n~l~~i~~~-~~~~~~~~~l~l~~n~~~ 237 (635)
T 4g8a_A 160 IQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCT-DLRVLHQMPLLNLSLDLSLNPMNFIQPG-AFKEIRLHKLTLRNNFDS 237 (635)
T ss_dssp CCCCCCCGGGGGCTTCCEEECCSSCCCEECGG-GGHHHHTCTTCCCEEECTTCCCCEECTT-TTTTCEEEEEEEESCCSS
T ss_pred cccCCCchhhccchhhhhhcccCccccccccc-cccchhhhhhhhhhhhcccCcccccCcc-cccchhhhhhhhhccccc
Confidence 9875 578889999999999999999986543 2333333 45789999999865544 445567888999998765
Q ss_pred cc-cCccccccccccceecccccccccc------ch----------------------hhhhhcccCCCCccEEEccCCC
Q 002021 287 GF-IPNTFGNLRNLSWLVLSDNYLTSST------QE----------------------LSFLSSLSNCKFLKYFDLSYNP 337 (979)
Q Consensus 287 ~~-~~~~~~~l~~L~~L~Ls~N~l~~~~------~~----------------------~~~~~~l~~l~~L~~L~Ls~N~ 337 (979)
.. .+..+.++..++...+..+...... .. ......+..+.+++.+++..|.
T Consensus 238 ~~~~~~~~~~l~~l~~~~l~~~~~~~~~~l~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~ 317 (635)
T 4g8a_A 238 LNVMKTCIQGLAGLEVHRLVLGEFRNEGNLEKFDKSALEGLCNLTIEEFRLAYLDYYLDGIIDLFNCLTNVSSFSLVSVT 317 (635)
T ss_dssp HHHHHHHHHTTTTCEEEEEEEECCTTSCCCSCCCTTTTGGGGGSEEEEEEEECCCSCEEECTTTTGGGTTCSEEEEESCE
T ss_pred ccccchhhcCCcccccccccccccccccccccccccccccccchhhhhhhhhhhcccccchhhhhhhhcccccccccccc
Confidence 32 2344556666655554332211100 00 0001224455678888888888
Q ss_pred CcccCCccccccccccccEEEccCccccCCCCccccCCCcccEEEecCCCCCchhHHhhhcCCCCcEEEecCcccCC--C
Q 002021 338 LYRILPRTTVGNLSHSLEEFKMSNCNISGGIPEEISNLTNLRTIYLGGNKLNGSILITLSKLQKLQDLGLKDNKLEG--S 415 (979)
Q Consensus 338 l~~~~~~~~~~~l~~~L~~L~L~~n~i~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~--~ 415 (979)
+..+.+..+ ..+++.|++.+|.+.+..+. .+..|+.+++.+|.+... .....+++|+.|++++|.+.. .
T Consensus 318 ~~~~~~~~~----~~~L~~L~l~~~~~~~~~~~---~l~~L~~l~l~~n~~~~~--~~~~~l~~L~~L~ls~n~l~~~~~ 388 (635)
T 4g8a_A 318 IERVKDFSY----NFGWQHLELVNCKFGQFPTL---KLKSLKRLTFTSNKGGNA--FSEVDLPSLEFLDLSRNGLSFKGC 388 (635)
T ss_dssp EEECGGGGS----CCCCSEEEEESCEESSCCCC---BCTTCCEEEEESCCSCCB--CCCCBCTTCCEEECCSSCCBEEEE
T ss_pred ccccccccc----chhhhhhhcccccccCcCcc---cchhhhhcccccccCCCC--cccccccccccchhhccccccccc
Confidence 776644322 34789999999998865543 467788999999987653 345678999999999999864 4
Q ss_pred ccccccCCCCCceEecCCCcccccCCccccCCCcCceEecCCCcccccc--ccccCcCCCcEEEeccccccCCCcccccc
Q 002021 416 IPYDICNLAELYRLDLDGNKLSGSIPACFSNLTSLRIVSLGSNELTSIP--LTFWNLKDILNLNFSSNFLTGSLPLEIGS 493 (979)
Q Consensus 416 ~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~lp--~~~~~l~~L~~L~ls~N~l~~~~p~~~~~ 493 (979)
.+..+..+.+|+.|+++.|.+.. .+..+..+++|+.+++.+|+....+ ..+..+.+++.++++.|.+++..|..+..
T Consensus 389 ~~~~~~~~~~L~~L~~~~~~~~~-~~~~~~~l~~L~~l~l~~~~~~~~~~~~~~~~l~~l~~l~ls~n~l~~~~~~~~~~ 467 (635)
T 4g8a_A 389 CSQSDFGTISLKYLDLSFNGVIT-MSSNFLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNG 467 (635)
T ss_dssp CCHHHHSCSCCCEEECCSCSEEE-ECSCCTTCTTCCEEECTTSEEESTTSSCTTTTCTTCCEEECTTSCCEECCTTTTTT
T ss_pred cccchhhhhhhhhhhcccccccc-ccccccccccccchhhhhcccccccccccccccccccccccccccccccccccccc
Confidence 55667788999999999999874 5667889999999999999877543 35778999999999999999999999999
Q ss_pred ccccceEeccCCcc-CcccchhhcCCcccceeecCCccccCCCCCcccccccccccccccccccccCCccccCccccCeE
Q 002021 494 LKVLVGIDLSRNNF-SGVIPTEIGGLKNLEYLFLGYNRLQGSIPNSFGDLISLKFLNLSNNNLSGVIPASLEKLSYLEDL 572 (979)
Q Consensus 494 l~~L~~L~Ls~N~l-~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L 572 (979)
++.|+.|+|++|++ .+.+|..|..+++|++|+|++|+|++..|..|.++++|++|+|++|+|++..|..|..+++|+.|
T Consensus 468 ~~~L~~L~Ls~N~~~~~~~~~~~~~l~~L~~L~Ls~N~L~~l~~~~f~~l~~L~~L~Ls~N~l~~l~~~~~~~l~~L~~L 547 (635)
T 4g8a_A 468 LSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMSHNNFFSLDTFPYKCLNSLQVL 547 (635)
T ss_dssp CTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCCBCCCGGGTTCTTCCEE
T ss_pred chhhhhhhhhhcccccccCchhhhhccccCEEECCCCccCCcChHHHcCCCCCCEEECCCCcCCCCChhHHhCCCCCCEE
Confidence 99999999999985 45688999999999999999999999999999999999999999999999999999999999999
Q ss_pred eccCCcccccCCCCC-CC-CCcccccccCCccccCCC
Q 002021 573 NLSFNQLEGKIPRGG-SF-GNFSAQSFEGNELLCGSP 607 (979)
Q Consensus 573 ~L~~N~l~~~~p~~~-~~-~~~~~~~~~~N~~~c~~p 607 (979)
+|++|+|++.+|... .+ .++..+.+.+||+.|.+.
T Consensus 548 ~Ls~N~l~~~~~~~l~~l~~~L~~L~L~~Np~~C~C~ 584 (635)
T 4g8a_A 548 DYSLNHIMTSKKQELQHFPSSLAFLNLTQNDFACTCE 584 (635)
T ss_dssp ECTTSCCCBCCSSCTTCCCTTCCEEECTTCCBCCSGG
T ss_pred ECCCCcCCCCCHHHHHhhhCcCCEEEeeCCCCcccCC
Confidence 999999999988632 23 567889999999999765
No 37
>3a79_B TLR6, VLRB.59, TOLL-like receptor 6, variable lymphocyte recepto; diacyl lipopeptide, innate immunity, Leu repeat, cell membrane, cytoplasmic vesicle; HET: PXS NAG BMA NDG; 2.90A {Mus musculus}
Probab=100.00 E-value=2.3e-46 Score=447.87 Aligned_cols=462 Identities=21% Similarity=0.190 Sum_probs=342.9
Q ss_pred EEEEecCCCccccCCCCCcCCCCCCeeeccCCcccccCCccccccCcccEEecccccccccCCccccCCCCCcEEEccCC
Q 002021 75 TVLNISSLNLTGTIPSQLGNLSSLQSLNLSFNRLFGSIPSAIFTTYTLKYVCLRGNQLSGTFPSFISNKSSLQHLDLSSN 154 (979)
Q Consensus 75 ~~l~l~~~~l~g~~~~~l~~l~~L~~L~L~~n~~~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~N 154 (979)
..+|++++++++ +|..+. ++|++|||++|++++..|.++..+++|++|+|++|++++..|..|+++++|++|||++|
T Consensus 34 ~~l~ls~~~L~~-ip~~~~--~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N 110 (562)
T 3a79_B 34 SMVDYSNRNLTH-VPKDLP--PRTKALSLSQNSISELRMPDISFLSELRVLRLSHNRIRSLDFHVFLFNQDLEYLDVSHN 110 (562)
T ss_dssp CEEECTTSCCCS-CCTTSC--TTCCEEECCSSCCCCCCGGGTTTCTTCCEEECCSCCCCEECTTTTTTCTTCCEEECTTS
T ss_pred cEEEcCCCCCcc-CCCCCC--CCcCEEECCCCCccccChhhhccCCCccEEECCCCCCCcCCHHHhCCCCCCCEEECCCC
Confidence 678888888885 776654 78888888888888777778888888888888888888777788888888888888888
Q ss_pred ccCchhhhhhhccCCcccCCCCccceeecccccccc-cccccccCCCCCCceecCCCeeeecCCccccccCccceeeccC
Q 002021 155 ALSGEIRANICREIPREFGNLPELELMSLAANNLQG-KIPLKIGNLRNLEKLDIGDNKLVGIAPIAIFNVSTLKILGLQD 233 (979)
Q Consensus 155 ~l~~~~~~~~~~~ip~~l~~l~~L~~L~L~~N~l~~-~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~ 233 (979)
.++ .+|.. .+++|++|+|++|++++ .+|..|+++++|++|+|++|++++. .+..+++|
T Consensus 111 ~l~---------~lp~~--~l~~L~~L~Ls~N~l~~l~~p~~~~~l~~L~~L~L~~n~l~~~---~~~~l~~L------- 169 (562)
T 3a79_B 111 RLQ---------NISCC--PMASLRHLDLSFNDFDVLPVCKEFGNLTKLTFLGLSAAKFRQL---DLLPVAHL------- 169 (562)
T ss_dssp CCC---------EECSC--CCTTCSEEECCSSCCSBCCCCGGGGGCTTCCEEEEECSBCCTT---TTGGGTTS-------
T ss_pred cCC---------ccCcc--ccccCCEEECCCCCccccCchHhhcccCcccEEecCCCccccC---chhhhhhc-------
Confidence 876 25655 67777777777777765 3356677777777777777766542 23333333
Q ss_pred CCCcCCCcccccCCCCCcCEEEccCCcc--ccccCcccccCC-CCcEEeccccccccccCc-cccccccccceecccccc
Q 002021 234 NSLSGCLSSIGYARLPNLEILSLWGNNF--SGTIPRFIFNAS-KLSILDLEGNSFSGFIPN-TFGNLRNLSWLVLSDNYL 309 (979)
Q Consensus 234 N~l~~~~~~~~~~~l~~L~~L~L~~N~l--~~~~p~~l~~l~-~L~~L~Ls~N~l~~~~~~-~~~~l~~L~~L~Ls~N~l 309 (979)
+|++|++++|.+ ++..|..+..+. +...+++++|.+.+.++. .+..+++|+.|++++|+.
T Consensus 170 ----------------~L~~L~L~~n~l~~~~~~~~~l~~l~~~~l~l~l~~n~~~~~~~~~~~~~l~~L~~L~l~~n~~ 233 (562)
T 3a79_B 170 ----------------HLSCILLDLVSYHIKGGETESLQIPNTTVLHLVFHPNSLFSVQVNMSVNALGHLQLSNIKLNDE 233 (562)
T ss_dssp ----------------CEEEEEEEESSCCCCSSSCCEEEECCEEEEEEEECSSSCCCCCCEEEESSEEEEEEEEEECCST
T ss_pred ----------------eeeEEEeecccccccccCcccccccCcceEEEEecCccchhhhhhhcccccceEEEeccccccc
Confidence 225555555555 445555555433 122456666666654443 455677777777777742
Q ss_pred c--cccchhhhhhcccCCCCccEEEccCCCCcccCCccccc-cccccccEEEccCccccCCCCccc-----cCCCcccEE
Q 002021 310 T--SSTQELSFLSSLSNCKFLKYFDLSYNPLYRILPRTTVG-NLSHSLEEFKMSNCNISGGIPEEI-----SNLTNLRTI 381 (979)
Q Consensus 310 ~--~~~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~-~l~~~L~~L~L~~n~i~~~~p~~l-----~~l~~L~~L 381 (979)
. ..+ ..+..+..++.|+.|+++++.+.......... ....+|++|++++|.+++.+|..+ ..++.|+.+
T Consensus 234 ~~~~l~---~~~~~l~~l~~L~~L~L~~~~l~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~ip~~~~~~~~~~L~~L~~~ 310 (562)
T 3a79_B 234 NCQRLM---TFLSELTRGPTLLNVTLQHIETTWKCSVKLFQFFWPRPVEYLNIYNLTITERIDREEFTYSETALKSLMIE 310 (562)
T ss_dssp THHHHH---HHHHHHHSCSSCEEEEEEEEEECHHHHHHHHHHHTTSSEEEEEEEEEEECSCCCCCCCCCCSCSCCEEEEE
T ss_pred ccchHH---HHHHHHhccCcceEEEecCCcCcHHHHHHHHHhhhcccccEEEEeccEeeccccchhhhcccccchheehh
Confidence 1 111 12334566777777777766654321110000 012379999999999998899887 888889889
Q ss_pred EecCCCCCchhHHhhh---cCCCCcEEEecCcccCCCccccccCCCCCceEecCCCcccccCCccccCCCcCceEecCCC
Q 002021 382 YLGGNKLNGSILITLS---KLQKLQDLGLKDNKLEGSIPYDICNLAELYRLDLDGNKLSGSIPACFSNLTSLRIVSLGSN 458 (979)
Q Consensus 382 ~L~~N~l~~~~~~~l~---~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N 458 (979)
++..|.+ ..+...+. ...+|+.|++++|.+.... ....+++|++|++++|++++..|..+.++++|++|++++|
T Consensus 311 ~~~~~~~-~~p~~~~~~~~~~~~L~~L~l~~n~~~~~~--~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N 387 (562)
T 3a79_B 311 HVKNQVF-LFSKEALYSVFAEMNIKMLSISDTPFIHMV--CPPSPSSFTFLNFTQNVFTDSVFQGCSTLKRLQTLILQRN 387 (562)
T ss_dssp EEEECCC-SSCHHHHHHHHHTCCCSEEEEESSCCCCCC--CCSSCCCCCEEECCSSCCCTTTTTTCCSCSSCCEEECCSS
T ss_pred hccccee-ecChhhhhhhhccCcceEEEccCCCccccc--CccCCCCceEEECCCCccccchhhhhcccCCCCEEECCCC
Confidence 9988887 23323333 2378999999999986432 1268899999999999999989999999999999999999
Q ss_pred cccccc---ccccCcCCCcEEEeccccccCCCcc-ccccccccceEeccCCccCcccchhhcCCcccceeecCCccccCC
Q 002021 459 ELTSIP---LTFWNLKDILNLNFSSNFLTGSLPL-EIGSLKVLVGIDLSRNNFSGVIPTEIGGLKNLEYLFLGYNRLQGS 534 (979)
Q Consensus 459 ~l~~lp---~~~~~l~~L~~L~ls~N~l~~~~p~-~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~ 534 (979)
+++.++ ..+..+++|+.|++++|++++.+|. .+..+++|+.|+|++|++++.+|..+. ++|++|+|++|+|+ .
T Consensus 388 ~l~~~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~--~~L~~L~L~~N~l~-~ 464 (562)
T 3a79_B 388 GLKNFFKVALMTKNMSSLETLDVSLNSLNSHAYDRTCAWAESILVLNLSSNMLTGSVFRCLP--PKVKVLDLHNNRIM-S 464 (562)
T ss_dssp CCCBTTHHHHTTTTCTTCCEEECTTSCCBSCCSSCCCCCCTTCCEEECCSSCCCGGGGSSCC--TTCSEEECCSSCCC-C
T ss_pred CcCCcccchhhhcCCCCCCEEECCCCcCCCccChhhhcCcccCCEEECCCCCCCcchhhhhc--CcCCEEECCCCcCc-c
Confidence 999664 5688999999999999999985554 588999999999999999988777665 79999999999999 6
Q ss_pred CCCcccccccccccccccccccccCCccccCccccCeEeccCCcccccCCC
Q 002021 535 IPNSFGDLISLKFLNLSNNNLSGVIPASLEKLSYLEDLNLSFNQLEGKIPR 585 (979)
Q Consensus 535 ~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~ 585 (979)
+|..+..+++|++|+|++|+|++..+..+..+++|+.|++++|+++|.+|.
T Consensus 465 ip~~~~~l~~L~~L~L~~N~l~~l~~~~~~~l~~L~~L~l~~N~~~c~c~~ 515 (562)
T 3a79_B 465 IPKDVTHLQALQELNVASNQLKSVPDGVFDRLTSLQYIWLHDNPWDCTCPG 515 (562)
T ss_dssp CCTTTTSSCCCSEEECCSSCCCCCCTTSTTTCTTCCCEECCSCCBCCCHHH
T ss_pred cChhhcCCCCCCEEECCCCCCCCCCHHHHhcCCCCCEEEecCCCcCCCcch
Confidence 887777999999999999999954444499999999999999999998774
No 38
>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A*
Probab=100.00 E-value=1.4e-46 Score=407.34 Aligned_cols=250 Identities=21% Similarity=0.338 Sum_probs=189.1
Q ss_pred CCCCCCceeeeecceEEEEEE-cCCCcEEEEEEeccccc-cchhcHHHHHHHHHhcCCCCeeeEEEeeccCC--------
Q 002021 682 DGFSENNLIGRGGFGSVYKAS-LGDGMEVAVKVFTSQCG-RAFKSFDVECEIMKSIRHRNLIKVISSCSNEE-------- 751 (979)
Q Consensus 682 ~~~~~~~~lG~G~~g~Vy~~~-~~~~~~vAvK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~-------- 751 (979)
++|+..+.||+|+||+||+|. ..+|+.||||+++.... ...+.+.+|+++|++++|||||++++++.+.+
T Consensus 5 ~dy~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~~~~~~ 84 (299)
T 4g31_A 5 TDFEPIQCLGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYFNAWLEKNTTEKLQPS 84 (299)
T ss_dssp HHEEEEEEEEECC--EEEEEEETTTCCEEEEEEEEECSSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEEC--------
T ss_pred hhCEEeeEEecCCCeEEEEEEECCCCCEEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEecCcccccccc
Confidence 458889999999999999995 56799999999875432 34467889999999999999999999986543
Q ss_pred ----eeEEEEEecCCCccceeeccCC--CCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCEEeCCCCcEEEEe
Q 002021 752 ----FKALVLEYMPHGSLEKYLYSSN--CILDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSD 825 (979)
Q Consensus 752 ----~~~lv~E~~~~g~L~~~l~~~~--~~l~~~~~~~i~~~ia~~L~~LH~~~~~~i~H~Dik~~NIll~~~~~~kl~D 825 (979)
..|+||||+++|+|.+++.... ...++..++.++.||++||+||| +++|+||||||+|||++.++.+||+|
T Consensus 85 ~~~~~l~ivmE~~~gg~L~~~l~~~~~~~~~~~~~~~~i~~qi~~al~ylH---~~~IiHRDlKp~NILl~~~~~vKl~D 161 (299)
T 4g31_A 85 SPKVYLYIQMQLCRKENLKDWMNGRCTIEERERSVCLHIFLQIAEAVEFLH---SKGLMHRDLKPSNIFFTMDDVVKVGD 161 (299)
T ss_dssp --CEEEEEEEECCCSCCHHHHHHTCCSGGGSCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEECTTCCEEECC
T ss_pred CCCcEEEEEEecCCCCcHHHHHHhcCCCChhHHHHHHHHHHHHHHHHHHHH---HCcCccccCcHHHeEECCCCcEEEcc
Confidence 3689999999999999997653 23566778999999999999999 99999999999999999999999999
Q ss_pred eccccccCCCCCc----------ceecccccCCCCCCccccCCCCCCCchhHHHHHHHHHHHHcCCCCCcccccCcchHh
Q 002021 826 FSIAKMLTGEDQS----------MIQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFTGKKPTDEIFNGEMTLK 895 (979)
Q Consensus 826 fg~~~~~~~~~~~----------~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~tg~~P~~~~~~~~~~~~ 895 (979)
||+|+........ ......+||+.|||||++.+..|+.++||||+||++|||++ ||...... ..
T Consensus 162 FGla~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyell~---Pf~~~~~~---~~ 235 (299)
T 4g31_A 162 FGLVTAMDQDEEEQTVLTPMPAYARHTGQVGTKLYMSPEQIHGNSYSHKVDIFSLGLILFELLY---PFSTQMER---VR 235 (299)
T ss_dssp CCCC--------------------------CCCTTSCHHHHTTCCCCTHHHHHHHHHHHHHHHS---CCSSHHHH---HH
T ss_pred CccceecCCCccccccccccccccccCCcccCccccCHHHHcCCCCCCHHHHHHHHHHHHHHcc---CCCCccHH---HH
Confidence 9999876433211 12234579999999999999999999999999999999996 77532111 11
Q ss_pred HhhhhhcCCccchhhcccccCchhhhhHHHHHHHHHHHHHHHhccccCcCCCCCHHHHHHH
Q 002021 896 HWVNDWLPISTMEVVDANLLSQEDIHFVAKEQCVSFVFNLAMECTMEFPKQRINAKEIVTK 956 (979)
Q Consensus 896 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~eil~~ 956 (979)
.. ...... ...+.....++...+++.+||+.||++|||+.|+++|
T Consensus 236 ~~-~~~~~~---------------~~p~~~~~~~~~~~~li~~~L~~dP~~Rps~~eil~h 280 (299)
T 4g31_A 236 TL-TDVRNL---------------KFPPLFTQKYPCEYVMVQDMLSPSPMERPEAINIIEN 280 (299)
T ss_dssp HH-HHHHTT---------------CCCHHHHHHCHHHHHHHHHHTCSSGGGSCCHHHHHTS
T ss_pred HH-HHHhcC---------------CCCCCCcccCHHHHHHHHHHcCCChhHCcCHHHHhcC
Confidence 00 000000 0011223344567889999999999999999999875
No 39
>3a79_B TLR6, VLRB.59, TOLL-like receptor 6, variable lymphocyte recepto; diacyl lipopeptide, innate immunity, Leu repeat, cell membrane, cytoplasmic vesicle; HET: PXS NAG BMA NDG; 2.90A {Mus musculus}
Probab=100.00 E-value=2.3e-44 Score=430.59 Aligned_cols=440 Identities=22% Similarity=0.236 Sum_probs=324.0
Q ss_pred CcEEEEEecCCCccccCCCCCcCCCCCCeeeccCCcccccCCccccccCcccEEecccccccccCCccccCCCCCcEEEc
Q 002021 72 QRVTVLNISSLNLTGTIPSQLGNLSSLQSLNLSFNRLFGSIPSAIFTTYTLKYVCLRGNQLSGTFPSFISNKSSLQHLDL 151 (979)
Q Consensus 72 ~~v~~l~l~~~~l~g~~~~~l~~l~~L~~L~L~~n~~~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L 151 (979)
..++.|+|++|.+++..|..++++++|++|+|++|++++..|.++..+++|++|+|++|+++ .+|.. .+++|++|||
T Consensus 52 ~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~-~lp~~--~l~~L~~L~L 128 (562)
T 3a79_B 52 PRTKALSLSQNSISELRMPDISFLSELRVLRLSHNRIRSLDFHVFLFNQDLEYLDVSHNRLQ-NISCC--PMASLRHLDL 128 (562)
T ss_dssp TTCCEEECCSSCCCCCCGGGTTTCTTCCEEECCSCCCCEECTTTTTTCTTCCEEECTTSCCC-EECSC--CCTTCSEEEC
T ss_pred CCcCEEECCCCCccccChhhhccCCCccEEECCCCCCCcCCHHHhCCCCCCCEEECCCCcCC-ccCcc--ccccCCEEEC
Confidence 57999999999999888889999999999999999999999999999999999999999999 56666 8999999999
Q ss_pred cCCccCchhhhhhhccCCcccCCCCccceeecccccccccccccccCCCCC--CceecCCCee--eecCCccccccC-cc
Q 002021 152 SSNALSGEIRANICREIPREFGNLPELELMSLAANNLQGKIPLKIGNLRNL--EKLDIGDNKL--VGIAPIAIFNVS-TL 226 (979)
Q Consensus 152 s~N~l~~~~~~~~~~~ip~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L--~~L~Ls~N~l--~~~~p~~l~~l~-~L 226 (979)
++|++++. .+|..|+++++|++|+|++|++++. .+..+++| ++|+|++|++ ++..|..+.++. +.
T Consensus 129 s~N~l~~l-------~~p~~~~~l~~L~~L~L~~n~l~~~---~~~~l~~L~L~~L~L~~n~l~~~~~~~~~l~~l~~~~ 198 (562)
T 3a79_B 129 SFNDFDVL-------PVCKEFGNLTKLTFLGLSAAKFRQL---DLLPVAHLHLSCILLDLVSYHIKGGETESLQIPNTTV 198 (562)
T ss_dssp CSSCCSBC-------CCCGGGGGCTTCCEEEEECSBCCTT---TTGGGTTSCEEEEEEEESSCCCCSSSCCEEEECCEEE
T ss_pred CCCCcccc-------CchHhhcccCcccEEecCCCccccC---chhhhhhceeeEEEeecccccccccCcccccccCcce
Confidence 99999863 2568999999999999999999863 45555666 9999999999 888898888765 22
Q ss_pred ceeeccCCCCcCCCcccccCCCCCcCEEEccCCc-----cccccCcccccCCCCcEEeccccccccccCcc---cccccc
Q 002021 227 KILGLQDNSLSGCLSSIGYARLPNLEILSLWGNN-----FSGTIPRFIFNASKLSILDLEGNSFSGFIPNT---FGNLRN 298 (979)
Q Consensus 227 ~~L~L~~N~l~~~~~~~~~~~l~~L~~L~L~~N~-----l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~~~~---~~~l~~ 298 (979)
-.++++.|.+.+......+..+++|+.|++++|+ +.+. ...+..+++|+.|+++++.+++..... ....++
T Consensus 199 l~l~l~~n~~~~~~~~~~~~~l~~L~~L~l~~n~~~~~~l~~~-~~~l~~l~~L~~L~L~~~~l~~~~~~~~~~~~~~~~ 277 (562)
T 3a79_B 199 LHLVFHPNSLFSVQVNMSVNALGHLQLSNIKLNDENCQRLMTF-LSELTRGPTLLNVTLQHIETTWKCSVKLFQFFWPRP 277 (562)
T ss_dssp EEEEECSSSCCCCCCEEEESSEEEEEEEEEECCSTTHHHHHHH-HHHHHSCSSCEEEEEEEEEECHHHHHHHHHHHTTSS
T ss_pred EEEEecCccchhhhhhhcccccceEEEecccccccccchHHHH-HHHHhccCcceEEEecCCcCcHHHHHHHHHhhhccc
Confidence 3568899999887777778888999999999885 3322 234667778888888777765431111 111236
Q ss_pred ccceeccccccc-cccchhhhhhcccCCCCccEEEccCCCCcccCCccccccccccccEEEccCccccCCCC-ccccC--
Q 002021 299 LSWLVLSDNYLT-SSTQELSFLSSLSNCKFLKYFDLSYNPLYRILPRTTVGNLSHSLEEFKMSNCNISGGIP-EEISN-- 374 (979)
Q Consensus 299 L~~L~Ls~N~l~-~~~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~~L~~L~L~~n~i~~~~p-~~l~~-- 374 (979)
|++|++++|.++ .+|... +.....+++.|+.++++.|.+ . +| ..+..
T Consensus 278 L~~L~l~~n~l~~~ip~~~-~~~~~~~L~~L~~~~~~~~~~-~---------------------------~p~~~~~~~~ 328 (562)
T 3a79_B 278 VEYLNIYNLTITERIDREE-FTYSETALKSLMIEHVKNQVF-L---------------------------FSKEALYSVF 328 (562)
T ss_dssp EEEEEEEEEEECSCCCCCC-CCCCSCSCCEEEEEEEEECCC-S---------------------------SCHHHHHHHH
T ss_pred ccEEEEeccEeeccccchh-hhcccccchheehhhccccee-e---------------------------cChhhhhhhh
Confidence 677777777666 333221 000013344444444444433 1 22 11111
Q ss_pred -CCcccEEEecCCCCCchhHHhhhcCCCCcEEEecCcccCCCccccccCCCCCceEecCCCccccc--CCccccCCCcCc
Q 002021 375 -LTNLRTIYLGGNKLNGSILITLSKLQKLQDLGLKDNKLEGSIPYDICNLAELYRLDLDGNKLSGS--IPACFSNLTSLR 451 (979)
Q Consensus 375 -l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~--~~~~~~~l~~L~ 451 (979)
..+|++|++++|.+.... ....+++|++|++++|++++..|..+.++++|++|++++|++++. .|..+.++++|+
T Consensus 329 ~~~~L~~L~l~~n~~~~~~--~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~l~~L~ 406 (562)
T 3a79_B 329 AEMNIKMLSISDTPFIHMV--CPPSPSSFTFLNFTQNVFTDSVFQGCSTLKRLQTLILQRNGLKNFFKVALMTKNMSSLE 406 (562)
T ss_dssp HTCCCSEEEEESSCCCCCC--CCSSCCCCCEEECCSSCCCTTTTTTCCSCSSCCEEECCSSCCCBTTHHHHTTTTCTTCC
T ss_pred ccCcceEEEccCCCccccc--CccCCCCceEEECCCCccccchhhhhcccCCCCEEECCCCCcCCcccchhhhcCCCCCC
Confidence 145666666666654322 115666777777777777776777777777777777777777753 245677777888
Q ss_pred eEecCCCcccc-cccc-ccCcCCCcEEEeccccccCCCccccccccccceEeccCCccCcccchhhcCCcccceeecCCc
Q 002021 452 IVSLGSNELTS-IPLT-FWNLKDILNLNFSSNFLTGSLPLEIGSLKVLVGIDLSRNNFSGVIPTEIGGLKNLEYLFLGYN 529 (979)
Q Consensus 452 ~L~L~~N~l~~-lp~~-~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N 529 (979)
+|++++|+++. +|.. +..+++|+.|++++|++++..|..+. ++|+.|+|++|+|+ .+|..+..+++|++|+|++|
T Consensus 407 ~L~l~~N~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~--~~L~~L~L~~N~l~-~ip~~~~~l~~L~~L~L~~N 483 (562)
T 3a79_B 407 TLDVSLNSLNSHAYDRTCAWAESILVLNLSSNMLTGSVFRCLP--PKVKVLDLHNNRIM-SIPKDVTHLQALQELNVASN 483 (562)
T ss_dssp EEECTTSCCBSCCSSCCCCCCTTCCEEECCSSCCCGGGGSSCC--TTCSEEECCSSCCC-CCCTTTTSSCCCSEEECCSS
T ss_pred EEECCCCcCCCccChhhhcCcccCCEEECCCCCCCcchhhhhc--CcCCEEECCCCcCc-ccChhhcCCCCCCEEECCCC
Confidence 88888888775 7664 66778888888888888776666554 68889999999998 56766668999999999999
Q ss_pred cccCCCCCc-ccccccccccccccccccccCC
Q 002021 530 RLQGSIPNS-FGDLISLKFLNLSNNNLSGVIP 560 (979)
Q Consensus 530 ~l~~~~p~~-~~~l~~L~~L~Ls~N~l~~~~p 560 (979)
+|++ +|.. |..+++|+.|+|++|++++..|
T Consensus 484 ~l~~-l~~~~~~~l~~L~~L~l~~N~~~c~c~ 514 (562)
T 3a79_B 484 QLKS-VPDGVFDRLTSLQYIWLHDNPWDCTCP 514 (562)
T ss_dssp CCCC-CCTTSTTTCTTCCCEECCSCCBCCCHH
T ss_pred CCCC-CCHHHHhcCCCCCEEEecCCCcCCCcc
Confidence 9994 5554 8899999999999999986544
No 40
>4f9c_A Cell division cycle 7-related protein kinase; Ser/Thr protein kinase, transferase, phosphorylation, cell C cell division, mitosis, S phase; HET: 0SX; 2.08A {Homo sapiens} PDB: 4f99_A* 4f9b_A* 4f9a_A*
Probab=100.00 E-value=1.8e-44 Score=401.66 Aligned_cols=270 Identities=20% Similarity=0.292 Sum_probs=201.6
Q ss_pred HHhhCCCCCCceeeeecceEEEEEEc----CCCcEEEEEEeccccccchhcHHHHHHHHHhc-CCCCeeeEEEeeccCCe
Q 002021 678 CRATDGFSENNLIGRGGFGSVYKASL----GDGMEVAVKVFTSQCGRAFKSFDVECEIMKSI-RHRNLIKVISSCSNEEF 752 (979)
Q Consensus 678 ~~~~~~~~~~~~lG~G~~g~Vy~~~~----~~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~ 752 (979)
....+.|++.+.||+|+||+||+|+. .+++.||||++... .....+.+|+++++.+ +|||||++++++.+.++
T Consensus 17 p~l~~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~--~~~~~~~~E~~~l~~~~~h~nIv~l~~~~~~~~~ 94 (361)
T 4f9c_A 17 PQLSNVFKIEDKIGEGTFSSVYLATAQLQVGPEEKIALKHLIPT--SHPIRIAAELQCLTVAGGQDNVMGVKYCFRKNDH 94 (361)
T ss_dssp GGGGGTCEEEEEEEECSSEEEEEEEEEBTTSCEEEEEEEEECTT--SCHHHHHHHHHHHHHTCSBTTBCCCSEEEEETTE
T ss_pred CCccCcEEEEEEEecccCcEEEEEEEcccCCCCCEEEEEEEccc--cCHHHHHHHHHHHHHhcCCCCCceEEEEEEECCE
Confidence 34567899999999999999999953 35788999998654 2345678899999998 69999999999999999
Q ss_pred eEEEEEecCCCccceeeccCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCEEeCCC-CcEEEEeeccccc
Q 002021 753 KALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDN-MVAHLSDFSIAKM 831 (979)
Q Consensus 753 ~~lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~i~H~Dik~~NIll~~~-~~~kl~Dfg~~~~ 831 (979)
.|+||||+++|+|.+++. .+++.+++.++.|++.||+||| +++|+||||||+|||++.+ +.+||+|||+|+.
T Consensus 95 ~~lvmE~~~g~~L~~~~~----~l~~~~~~~~~~qll~al~ylH---~~gIiHRDiKPeNiLl~~~~~~~kl~DFGla~~ 167 (361)
T 4f9c_A 95 VVIAMPYLEHESFLDILN----SLSFQEVREYMLNLFKALKRIH---QFGIVHRDVKPSNFLYNRRLKKYALVDFGLAQG 167 (361)
T ss_dssp EEEEEECCCCCCHHHHHT----TCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEEETTTTEEEECCCTTCEE
T ss_pred EEEEEeCCCcccHHHHHc----CCCHHHHHHHHHHHHHHHHHHH---HCCeEeCcCCHHHeEEeCCCCeEEECcCCCCcc
Confidence 999999999999999884 4899999999999999999999 9999999999999999876 7999999999976
Q ss_pred cCCCCCc--------------------------ceecccccCCCCCCccccCCC-CCCCchhHHHHHHHHHHHHcCCCCC
Q 002021 832 LTGEDQS--------------------------MIQTQTLATIGYMAPEYGREG-RVSANGDVYSFGIMLMETFTGKKPT 884 (979)
Q Consensus 832 ~~~~~~~--------------------------~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwslG~il~el~tg~~P~ 884 (979)
....... ......+||+.|+|||++.+. .|+.++||||+||++|||+||+.||
T Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~y~~~~DiWSlG~il~ell~G~~Pf 247 (361)
T 4f9c_A 168 THDTKIELLKFVQSEAQQERCSQNKCSICLSRRQQVAPRAGTPGFRAPEVLTKCPNQTTAIDMWSAGVIFLSLLSGRYPF 247 (361)
T ss_dssp CTTCSCGGGGGC--------------------------CCCCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHHHTCSSS
T ss_pred cCCccccccccccccccccccccccccccccccccccccccCccccCHHHHcCCCCCCCccchhhhHHHHHHHHHCCCCC
Confidence 5322110 112345799999999998765 5899999999999999999999999
Q ss_pred cccccCcchHhHhhhh------------h---------cCCc-cchhhc---------ccccC---chhhhhHHHHHHHH
Q 002021 885 DEIFNGEMTLKHWVND------------W---------LPIS-TMEVVD---------ANLLS---QEDIHFVAKEQCVS 930 (979)
Q Consensus 885 ~~~~~~~~~~~~~~~~------------~---------~~~~-~~~~~~---------~~~~~---~~~~~~~~~~~~~~ 930 (979)
....+....+...... . .+.. ...... +.... ........+..+++
T Consensus 248 ~~~~~~~~~l~~I~~~~G~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~is~ 327 (361)
T 4f9c_A 248 YKASDDLTALAQIMTIRGSRETIQAAKTFGKSILCSKEVPAQDLRKLCERLRGMDSSTPKLTSDIQGHATNLEGWNEVPD 327 (361)
T ss_dssp SCCSSHHHHHHHHHHHHCHHHHHHHHHHTTEEEEESSCCCCCCHHHHHHHHC----------------------CTTCCH
T ss_pred CCCCCHHHHHHHHHHhcCCccchhhhhhccccccccccCcchhhhHHHHhhccccccccccccccccccccccccccCCH
Confidence 6433221111111100 0 0000 000000 00000 00001112234567
Q ss_pred HHHHHHHhccccCcCCCCCHHHHHHH
Q 002021 931 FVFNLAMECTMEFPKQRINAKEIVTK 956 (979)
Q Consensus 931 ~l~~l~~~cl~~dP~~Rps~~eil~~ 956 (979)
++.+|+.+|++.||++|||++|+++|
T Consensus 328 ~a~DLl~~lL~~dP~~R~ta~eaL~H 353 (361)
T 4f9c_A 328 EAYDLLDKLLDLNPASRITAEEALLH 353 (361)
T ss_dssp HHHHHHHHHTCSCTTTSCCHHHHHTS
T ss_pred HHHHHHHHHCcCChhHCcCHHHHhcC
Confidence 79999999999999999999999876
No 41
>1jl5_A Outer protein YOPM; leucine-rich repeat, molecular pathogenesis, effector protein, virulence factor, toxin; 2.10A {Yersinia pestis} SCOP: c.10.2.6 PDB: 1g9u_A
Probab=100.00 E-value=1.8e-43 Score=408.56 Aligned_cols=405 Identities=26% Similarity=0.314 Sum_probs=204.3
Q ss_pred CCCCCeeeccCCcccccCCccccccCcccEEecccccccccCCccccCCCCC-------------cEEEccCCccCchhh
Q 002021 95 LSSLQSLNLSFNRLFGSIPSAIFTTYTLKYVCLRGNQLSGTFPSFISNKSSL-------------QHLDLSSNALSGEIR 161 (979)
Q Consensus 95 l~~L~~L~L~~n~~~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L-------------~~L~Ls~N~l~~~~~ 161 (979)
.++|++|++++|++ |.+|++++.+++|++|+|++|+++|.+|..++++++| ++|++++|.+++
T Consensus 10 ~~~L~~L~l~~n~l-~~iP~~i~~L~~L~~L~l~~n~~~~~~p~~~~~l~~L~~l~l~~c~~~~l~~L~l~~~~l~~--- 85 (454)
T 1jl5_A 10 NTFLQEPLRHSSNL-TEMPVEAENVKSKTEYYNAWSEWERNAPPGNGEQREMAVSRLRDCLDRQAHELELNNLGLSS--- 85 (454)
T ss_dssp -------------------------CCHHHHHHHHHHHHHTSCTTSCCCHHHHHHHHHHHHHHTCSEEECTTSCCSC---
T ss_pred cccchhhhcccCch-hhCChhHhcccchhhhhccCCcccccCCcccccchhcchhhhhhhhccCCCEEEecCCcccc---
Confidence 45555566665555 4556555556666666666666655555555555554 555665555543
Q ss_pred hhhhccCCcccCCCCccceeecccccccccccccccCCCCCCceecCCCeeeecCCccccccCccceeeccCCCCcCCCc
Q 002021 162 ANICREIPREFGNLPELELMSLAANNLQGKIPLKIGNLRNLEKLDIGDNKLVGIAPIAIFNVSTLKILGLQDNSLSGCLS 241 (979)
Q Consensus 162 ~~~~~~ip~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~ 241 (979)
+|.. .++|++|++++|.+++ +|.. +++|++|++++|+++++...
T Consensus 86 ------lp~~---~~~L~~L~l~~n~l~~-lp~~---~~~L~~L~l~~n~l~~l~~~----------------------- 129 (454)
T 1jl5_A 86 ------LPEL---PPHLESLVASCNSLTE-LPEL---PQSLKSLLVDNNNLKALSDL----------------------- 129 (454)
T ss_dssp ------CCSC---CTTCSEEECCSSCCSS-CCCC---CTTCCEEECCSSCCSCCCSC-----------------------
T ss_pred ------CCCC---cCCCCEEEccCCcCCc-cccc---cCCCcEEECCCCccCcccCC-----------------------
Confidence 2321 2345555555555554 3322 24455555555555443110
Q ss_pred ccccCCCCCcCEEEccCCccccccCcccccCCCCcEEeccccccccccCccccccccccceeccccccccccchhhhhhc
Q 002021 242 SIGYARLPNLEILSLWGNNFSGTIPRFIFNASKLSILDLEGNSFSGFIPNTFGNLRNLSWLVLSDNYLTSSTQELSFLSS 321 (979)
Q Consensus 242 ~~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~ 321 (979)
.++|++|++++|++++ +| .+.++++|++|++++|++++ +|..+ .+|++|++++|+++.++ +
T Consensus 130 ------~~~L~~L~L~~n~l~~-lp-~~~~l~~L~~L~l~~N~l~~-lp~~~---~~L~~L~L~~n~l~~l~-------~ 190 (454)
T 1jl5_A 130 ------PPLLEYLGVSNNQLEK-LP-ELQNSSFLKIIDVDNNSLKK-LPDLP---PSLEFIAAGNNQLEELP-------E 190 (454)
T ss_dssp ------CTTCCEEECCSSCCSS-CC-CCTTCTTCCEEECCSSCCSC-CCCCC---TTCCEEECCSSCCSSCC-------C
T ss_pred ------CCCCCEEECcCCCCCC-Cc-ccCCCCCCCEEECCCCcCcc-cCCCc---ccccEEECcCCcCCcCc-------c
Confidence 1345555555555543 34 34555555555555555553 23222 35555555555555432 2
Q ss_pred ccCCCCccEEEccCCCCcccCCccccccccccccEEEccCccccCCCCccccCCCcccEEEecCCCCCchhHHhhhcCCC
Q 002021 322 LSNCKFLKYFDLSYNPLYRILPRTTVGNLSHSLEEFKMSNCNISGGIPEEISNLTNLRTIYLGGNKLNGSILITLSKLQK 401 (979)
Q Consensus 322 l~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~~L~~L~L~~n~i~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~l~~l~~ 401 (979)
+.++++|++|++++|++.+++. .+.+|++|++++|.++ .+| .++.+++|++|++++|++++... .+++
T Consensus 191 ~~~l~~L~~L~l~~N~l~~l~~------~~~~L~~L~l~~n~l~-~lp-~~~~l~~L~~L~l~~N~l~~l~~----~~~~ 258 (454)
T 1jl5_A 191 LQNLPFLTAIYADNNSLKKLPD------LPLSLESIVAGNNILE-ELP-ELQNLPFLTTIYADNNLLKTLPD----LPPS 258 (454)
T ss_dssp CTTCTTCCEEECCSSCCSSCCC------CCTTCCEEECCSSCCS-SCC-CCTTCTTCCEEECCSSCCSSCCS----CCTT
T ss_pred ccCCCCCCEEECCCCcCCcCCC------CcCcccEEECcCCcCC-ccc-ccCCCCCCCEEECCCCcCCcccc----cccc
Confidence 4455555666666665554321 1246777777777777 455 37788888888888888876332 2477
Q ss_pred CcEEEecCcccCCCccccccCCCCCceEecCCCcccccCCccccCCCcCceEecCCCccccccccccCcCCCcEEEeccc
Q 002021 402 LQDLGLKDNKLEGSIPYDICNLAELYRLDLDGNKLSGSIPACFSNLTSLRIVSLGSNELTSIPLTFWNLKDILNLNFSSN 481 (979)
Q Consensus 402 L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~lp~~~~~l~~L~~L~ls~N 481 (979)
|+.|++++|++++ +|.. +++|+.|++++|++++. |.. .++|++|++++|+++.++.. .++|+.|++++|
T Consensus 259 L~~L~l~~N~l~~-l~~~---~~~L~~L~ls~N~l~~l-~~~---~~~L~~L~l~~N~l~~i~~~---~~~L~~L~Ls~N 327 (454)
T 1jl5_A 259 LEALNVRDNYLTD-LPEL---PQSLTFLDVSENIFSGL-SEL---PPNLYYLNASSNEIRSLCDL---PPSLEELNVSNN 327 (454)
T ss_dssp CCEEECCSSCCSC-CCCC---CTTCCEEECCSSCCSEE-SCC---CTTCCEEECCSSCCSEECCC---CTTCCEEECCSS
T ss_pred cCEEECCCCcccc-cCcc---cCcCCEEECcCCccCcc-cCc---CCcCCEEECcCCcCCcccCC---cCcCCEEECCCC
Confidence 8888888888875 4443 36788888888888762 211 26788888888888876532 257888888888
Q ss_pred cccCCCccccccccccceEeccCCccCcccchhhcCCcccceeecCCccccC--CCCCcccccccccccccccccccccC
Q 002021 482 FLTGSLPLEIGSLKVLVGIDLSRNNFSGVIPTEIGGLKNLEYLFLGYNRLQG--SIPNSFGDLISLKFLNLSNNNLSGVI 559 (979)
Q Consensus 482 ~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~--~~p~~~~~l~~L~~L~Ls~N~l~~~~ 559 (979)
++++ +|.. +++|+.|++++|++++ +|. .+++|++|++++|++++ .+|.++..+ +.|++.+.+
T Consensus 328 ~l~~-lp~~---~~~L~~L~L~~N~l~~-lp~---~l~~L~~L~L~~N~l~~l~~ip~~l~~L--------~~n~~~~~i 391 (454)
T 1jl5_A 328 KLIE-LPAL---PPRLERLIASFNHLAE-VPE---LPQNLKQLHVEYNPLREFPDIPESVEDL--------RMNSHLAEV 391 (454)
T ss_dssp CCSC-CCCC---CTTCCEEECCSSCCSC-CCC---CCTTCCEEECCSSCCSSCCCCCTTCCEE--------ECCC-----
T ss_pred cccc-cccc---CCcCCEEECCCCcccc-ccc---hhhhccEEECCCCCCCcCCCChHHHHhh--------hhccccccc
Confidence 8886 5543 4778888888888884 455 46788888888888887 567666543 346666666
Q ss_pred CccccCccccCeEeccCCcccc--cCCCCCCCCCcccccccCCccccC
Q 002021 560 PASLEKLSYLEDLNLSFNQLEG--KIPRGGSFGNFSAQSFEGNELLCG 605 (979)
Q Consensus 560 p~~~~~l~~L~~L~L~~N~l~~--~~p~~~~~~~~~~~~~~~N~~~c~ 605 (979)
|.. +++|+.|++++|++++ .+|. .+..+.+.+|...|.
T Consensus 392 ~~~---~~~L~~L~ls~N~l~~~~~iP~-----sl~~L~~~~~~~~~~ 431 (454)
T 1jl5_A 392 PEL---PQNLKQLHVETNPLREFPDIPE-----SVEDLRMNSERVVDP 431 (454)
T ss_dssp ------------------------------------------------
T ss_pred ccc---cCcCCEEECCCCcCCccccchh-----hHhheeCcCcccCCc
Confidence 653 4677778888888876 5553 233444555544443
No 42
>4b99_A Mitogen-activated protein kinase 7; transferase, inhibitor; HET: R4L; 2.80A {Homo sapiens}
Probab=100.00 E-value=3.4e-44 Score=403.55 Aligned_cols=269 Identities=24% Similarity=0.256 Sum_probs=202.4
Q ss_pred CCCCCCceeeeecceEEEEEE-cCCCcEEEEEEeccccc--cchhcHHHHHHHHHhcCCCCeeeEEEeecc------CCe
Q 002021 682 DGFSENNLIGRGGFGSVYKAS-LGDGMEVAVKVFTSQCG--RAFKSFDVECEIMKSIRHRNLIKVISSCSN------EEF 752 (979)
Q Consensus 682 ~~~~~~~~lG~G~~g~Vy~~~-~~~~~~vAvK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~~~~~~------~~~ 752 (979)
++|++.+.||+|+||+||+|. ..+|+.||||+++.... ...+.+.+|+++|+.++|||||++++++.. .+.
T Consensus 54 ~~Y~~~~~lG~G~fG~V~~a~~~~t~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~~~~~ 133 (398)
T 4b99_A 54 DEYEIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELKILKHFKHDNIIAIKDILRPTVPYGEFKS 133 (398)
T ss_dssp SSEEEEEEEEECSSCEEEEEEETTTCCEEEEEEETTTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSSCTTTCCC
T ss_pred CCeEEEEEEecccCeEEEEEEECCCCCEEEEEEECccccchHHHHHHHHHHHHHHhcCCCCcceEeeeeecccccccCCE
Confidence 578999999999999999995 56899999999965432 234567889999999999999999998753 467
Q ss_pred eEEEEEecCCCccceeeccCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCEEeCCCCcEEEEeecccccc
Q 002021 753 KALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFSIAKML 832 (979)
Q Consensus 753 ~~lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~i~H~Dik~~NIll~~~~~~kl~Dfg~~~~~ 832 (979)
.|+|||||+ |+|.+++...+ .+++.++..++.||+.||+||| +++|+||||||+|||++.++.+||+|||+|+.+
T Consensus 134 ~~ivmE~~~-g~L~~~i~~~~-~l~~~~~~~~~~qil~al~ylH---~~~iiHRDlKP~NIl~~~~~~~Ki~DFGla~~~ 208 (398)
T 4b99_A 134 VYVVLDLME-SDLHQIIHSSQ-PLTLEHVRYFLYQLLRGLKYMH---SAQVIHRDLKPSNLLVNENCELKIGDFGMARGL 208 (398)
T ss_dssp EEEEEECCS-EEHHHHHTSSS-CCCHHHHHHHHHHHHHHHHHHH---HTTCBCCCCCGGGEEECTTCCEEECCCTTCBCC
T ss_pred EEEEEeCCC-CCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---HCcCcCCCcCccccccCCCCCEEEeecceeeec
Confidence 899999996 68999887654 7999999999999999999999 999999999999999999999999999999876
Q ss_pred CCCC--CcceecccccCCCCCCccccCCC-CCCCchhHHHHHHHHHHHHcCCCCCcccccCcchHhHhhhhhcCCc--cc
Q 002021 833 TGED--QSMIQTQTLATIGYMAPEYGREG-RVSANGDVYSFGIMLMETFTGKKPTDEIFNGEMTLKHWVNDWLPIS--TM 907 (979)
Q Consensus 833 ~~~~--~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwslG~il~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~--~~ 907 (979)
.... ........+||+.|||||++.+. .++.++||||+||++|||++|+.||......+ .+........... ..
T Consensus 209 ~~~~~~~~~~~~~~~GT~~Y~APEv~~~~~~~~~~~DiWSlG~il~ell~G~~pF~g~~~~~-~l~~I~~~~g~p~~~~~ 287 (398)
T 4b99_A 209 CTSPAEHQYFMTEYVATRWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQLFPGKNYVH-QLQLIMMVLGTPSPAVI 287 (398)
T ss_dssp -------CCCCCSSCCCCTTCCHHHHTTCSCCCTHHHHHHHHHHHHHHHHTSCSSCCSSHHH-HHHHHHHHHCCCCGGGT
T ss_pred ccCccccccccccceeChHhcCHHHhcCCCCCCChhheehhHHHHHHHHHCCCCCCCCCHHH-HHHHHHHhcCCCChHHh
Confidence 4322 12233557899999999998765 56999999999999999999999997532111 1111111110000 00
Q ss_pred hhhc--------ccccCc-hhhhhHHHHHHHHHHHHHHHhccccCcCCCCCHHHHHHH
Q 002021 908 EVVD--------ANLLSQ-EDIHFVAKEQCVSFVFNLAMECTMEFPKQRINAKEIVTK 956 (979)
Q Consensus 908 ~~~~--------~~~~~~-~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~eil~~ 956 (979)
.... ...... ...-......+++++.+|+.+|++.||++|||+.|+++|
T Consensus 288 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~H 345 (398)
T 4b99_A 288 QAVGAERVRAYIQSLPPRQPVPWETVYPGADRQALSLLGRMLRFEPSARISAAAALRH 345 (398)
T ss_dssp C-----CHHHHHHSSCCCCCCCHHHHSTTCCHHHHHHHHHHSCSSTTTSCCHHHHTTS
T ss_pred hhhhhhhhhhhhhcCCCcCCCCHHHhCCCCCHHHHHHHHHHCcCChhHCcCHHHHhcC
Confidence 0000 000000 000001112345778999999999999999999999987
No 43
>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A
Probab=100.00 E-value=1.3e-43 Score=418.90 Aligned_cols=253 Identities=19% Similarity=0.272 Sum_probs=211.6
Q ss_pred hCCCCCCceeeeecceEEEEE-EcCCCcEEEEEEeccccccchhcHHHHHHHHHhcCCCCeeeEEEeeccCCeeEEEEEe
Q 002021 681 TDGFSENNLIGRGGFGSVYKA-SLGDGMEVAVKVFTSQCGRAFKSFDVECEIMKSIRHRNLIKVISSCSNEEFKALVLEY 759 (979)
Q Consensus 681 ~~~~~~~~~lG~G~~g~Vy~~-~~~~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~E~ 759 (979)
.++|++.+.||+|+||+||+| ...+|+.||||++........+.+.+|+++|+.++|||||+++++|.+++..|+||||
T Consensus 156 l~~Y~i~~~lG~G~fg~V~~~~~~~tg~~~AiK~i~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~iv~E~ 235 (573)
T 3uto_A 156 LDHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLHDAFEDDNEMVMIYEF 235 (573)
T ss_dssp GGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHHHTCCTTBCCEEEEEECSSEEEEEEEC
T ss_pred ccccEEEEEEeeccCeEEEEEEECCCCCEEEEEEEeccchhhHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEEEee
Confidence 367999999999999999999 4568999999999765545567788999999999999999999999999999999999
Q ss_pred cCCCccceeeccCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCEEeCCC--CcEEEEeeccccccCCCCC
Q 002021 760 MPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDN--MVAHLSDFSIAKMLTGEDQ 837 (979)
Q Consensus 760 ~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~i~H~Dik~~NIll~~~--~~~kl~Dfg~~~~~~~~~~ 837 (979)
|+||+|.+++......+++.++..++.||+.||+||| +++|+||||||+|||++.+ +.+||+|||+|+.+....
T Consensus 236 ~~gg~L~~~i~~~~~~l~e~~~~~~~~qi~~al~ylH---~~~iiHRDlKp~Nill~~~~~~~vKl~DFG~a~~~~~~~- 311 (573)
T 3uto_A 236 MSGGELFEKVADEHNKMSEDEAVEYMRQVCKGLCHMH---ENNYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQ- 311 (573)
T ss_dssp CCCCBHHHHHTCTTSCEEHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEESSSSCCCEEECCCSSCEECCTTS-
T ss_pred cCCCcHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHH---HCCeeeccCChhhccccCCCCCCEEEeeccceeEccCCC-
Confidence 9999999999877668999999999999999999999 9999999999999999854 899999999999874332
Q ss_pred cceecccccCCCCCCccccCCCCCCCchhHHHHHHHHHHHHcCCCCCcccccCcchHhHhhhhhcCCccchhhcccccCc
Q 002021 838 SMIQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFTGKKPTDEIFNGEMTLKHWVNDWLPISTMEVVDANLLSQ 917 (979)
Q Consensus 838 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 917 (979)
.....+||+.|||||++.+..|+.++||||+||++|||++|+.||......+ .+........
T Consensus 312 --~~~~~~GT~~y~APEv~~~~~y~~~~DiWSlGvilyeml~G~~Pf~~~~~~~-~~~~i~~~~~--------------- 373 (573)
T 3uto_A 312 --SVKVTTGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSPFGGENDDE-TLRNVKSCDW--------------- 373 (573)
T ss_dssp --EEEEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCSSHHH-HHHHHHTTCC---------------
T ss_pred --ceeeeEECccccCHHHhCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHHH-HHHHHHhCCC---------------
Confidence 2345689999999999999999999999999999999999999997532111 1111111000
Q ss_pred hhhhhHHHHHHHHHHHHHHHhccccCcCCCCCHHHHHHH
Q 002021 918 EDIHFVAKEQCVSFVFNLAMECTMEFPKQRINAKEIVTK 956 (979)
Q Consensus 918 ~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~eil~~ 956 (979)
......+..++.++.+|+.+||+.||.+|||+.|+++|
T Consensus 374 -~~~~~~~~~~s~~~~dli~~~L~~dp~~R~t~~e~l~H 411 (573)
T 3uto_A 374 -NMDDSAFSGISEDGKDFIRKLLLADPNTRMTIHQALEH 411 (573)
T ss_dssp -CCCSGGGTTSCHHHHHHHHTTSCSSGGGSCCHHHHHHS
T ss_pred -CCCcccccCCCHHHHHHHHHHccCChhHCcCHHHHhcC
Confidence 00111223456678999999999999999999999986
No 44
>1jl5_A Outer protein YOPM; leucine-rich repeat, molecular pathogenesis, effector protein, virulence factor, toxin; 2.10A {Yersinia pestis} SCOP: c.10.2.6 PDB: 1g9u_A
Probab=100.00 E-value=2.4e-42 Score=399.19 Aligned_cols=406 Identities=24% Similarity=0.288 Sum_probs=244.3
Q ss_pred CcEEEEEecCCCccccCCCCCcCCCCCCeeeccCCcccccCCccccccCcc-------------cEEecccccccccCCc
Q 002021 72 QRVTVLNISSLNLTGTIPSQLGNLSSLQSLNLSFNRLFGSIPSAIFTTYTL-------------KYVCLRGNQLSGTFPS 138 (979)
Q Consensus 72 ~~v~~l~l~~~~l~g~~~~~l~~l~~L~~L~L~~n~~~~~~p~~~~~l~~L-------------~~L~L~~n~l~~~~p~ 138 (979)
.++.+|++++|++ |.+|+++++|++|++|++++|++.|.+|.+++.+.+| ++|++++|++++ +|.
T Consensus 11 ~~L~~L~l~~n~l-~~iP~~i~~L~~L~~L~l~~n~~~~~~p~~~~~l~~L~~l~l~~c~~~~l~~L~l~~~~l~~-lp~ 88 (454)
T 1jl5_A 11 TFLQEPLRHSSNL-TEMPVEAENVKSKTEYYNAWSEWERNAPPGNGEQREMAVSRLRDCLDRQAHELELNNLGLSS-LPE 88 (454)
T ss_dssp ------------------------CCHHHHHHHHHHHHHTSCTTSCCCHHHHHHHHHHHHHHTCSEEECTTSCCSC-CCS
T ss_pred ccchhhhcccCch-hhCChhHhcccchhhhhccCCcccccCCcccccchhcchhhhhhhhccCCCEEEecCCcccc-CCC
Confidence 5688999999999 8999999999999999999999999999999998875 999999999996 444
Q ss_pred cccCCCCCcEEEccCCccCchhhhhhhccCCcccCCCCccceeecccccccccccccccCCCCCCceecCCCeeeecCCc
Q 002021 139 FISNKSSLQHLDLSSNALSGEIRANICREIPREFGNLPELELMSLAANNLQGKIPLKIGNLRNLEKLDIGDNKLVGIAPI 218 (979)
Q Consensus 139 ~l~~l~~L~~L~Ls~N~l~~~~~~~~~~~ip~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~ 218 (979)
. .++|++|+|++|.+++ +|.. +++|++|++++|++++ +|.. .++|++|++++|+++++ |
T Consensus 89 ~---~~~L~~L~l~~n~l~~---------lp~~---~~~L~~L~l~~n~l~~-l~~~---~~~L~~L~L~~n~l~~l-p- 147 (454)
T 1jl5_A 89 L---PPHLESLVASCNSLTE---------LPEL---PQSLKSLLVDNNNLKA-LSDL---PPLLEYLGVSNNQLEKL-P- 147 (454)
T ss_dssp C---CTTCSEEECCSSCCSS---------CCCC---CTTCCEEECCSSCCSC-CCSC---CTTCCEEECCSSCCSSC-C-
T ss_pred C---cCCCCEEEccCCcCCc---------cccc---cCCCcEEECCCCccCc-ccCC---CCCCCEEECcCCCCCCC-c-
Confidence 2 4799999999999985 5643 4789999999999985 3322 27999999999999985 5
Q ss_pred cccccCccceeeccCCCCcCCCcccccCCCCCcCEEEccCCccccccCcccccCCCCcEEeccccccccccCcccccccc
Q 002021 219 AIFNVSTLKILGLQDNSLSGCLSSIGYARLPNLEILSLWGNNFSGTIPRFIFNASKLSILDLEGNSFSGFIPNTFGNLRN 298 (979)
Q Consensus 219 ~l~~l~~L~~L~L~~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~ 298 (979)
.+.++++|++|++++|++++.+. ..++|++|++++|++++ +| .+.++++|++|++++|++++ +|... ++
T Consensus 148 ~~~~l~~L~~L~l~~N~l~~lp~-----~~~~L~~L~L~~n~l~~-l~-~~~~l~~L~~L~l~~N~l~~-l~~~~---~~ 216 (454)
T 1jl5_A 148 ELQNSSFLKIIDVDNNSLKKLPD-----LPPSLEFIAAGNNQLEE-LP-ELQNLPFLTAIYADNNSLKK-LPDLP---LS 216 (454)
T ss_dssp CCTTCTTCCEEECCSSCCSCCCC-----CCTTCCEEECCSSCCSS-CC-CCTTCTTCCEEECCSSCCSS-CCCCC---TT
T ss_pred ccCCCCCCCEEECCCCcCcccCC-----CcccccEEECcCCcCCc-Cc-cccCCCCCCEEECCCCcCCc-CCCCc---Cc
Confidence 59999999999999999997543 23699999999999996 56 58899999999999999986 34433 58
Q ss_pred ccceeccccccccccchhhhhhcccCCCCccEEEccCCCCcccCCccccccccccccEEEccCccccCCCCccccCCCcc
Q 002021 299 LSWLVLSDNYLTSSTQELSFLSSLSNCKFLKYFDLSYNPLYRILPRTTVGNLSHSLEEFKMSNCNISGGIPEEISNLTNL 378 (979)
Q Consensus 299 L~~L~Ls~N~l~~~~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~~L~~L~L~~n~i~~~~p~~l~~l~~L 378 (979)
|++|++++|.++.++ .+..+++|++|++++|++..+.. .+.+|++|++++|++++ +|.. .++|
T Consensus 217 L~~L~l~~n~l~~lp-------~~~~l~~L~~L~l~~N~l~~l~~------~~~~L~~L~l~~N~l~~-l~~~---~~~L 279 (454)
T 1jl5_A 217 LESIVAGNNILEELP-------ELQNLPFLTTIYADNNLLKTLPD------LPPSLEALNVRDNYLTD-LPEL---PQSL 279 (454)
T ss_dssp CCEEECCSSCCSSCC-------CCTTCTTCCEEECCSSCCSSCCS------CCTTCCEEECCSSCCSC-CCCC---CTTC
T ss_pred ccEEECcCCcCCccc-------ccCCCCCCCEEECCCCcCCcccc------cccccCEEECCCCcccc-cCcc---cCcC
Confidence 999999999998655 26788889999999998876532 23577788888877775 3432 3566
Q ss_pred cEEEecCCCCCchhHHhhhcCCCCcEEEecCcccCCCccccccCCCCCceEecCCCcccccCCccccCC-CcCceEecCC
Q 002021 379 RTIYLGGNKLNGSILITLSKLQKLQDLGLKDNKLEGSIPYDICNLAELYRLDLDGNKLSGSIPACFSNL-TSLRIVSLGS 457 (979)
Q Consensus 379 ~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l-~~L~~L~L~~ 457 (979)
++|++++|++++... -.+ +|+.|++++|++++. + .+ ++|++|++++
T Consensus 280 ~~L~ls~N~l~~l~~----~~~------------------------~L~~L~l~~N~l~~i-~----~~~~~L~~L~Ls~ 326 (454)
T 1jl5_A 280 TFLDVSENIFSGLSE----LPP------------------------NLYYLNASSNEIRSL-C----DLPPSLEELNVSN 326 (454)
T ss_dssp CEEECCSSCCSEESC----CCT------------------------TCCEEECCSSCCSEE-C----CCCTTCCEEECCS
T ss_pred CEEECcCCccCcccC----cCC------------------------cCCEEECcCCcCCcc-c----CCcCcCCEEECCC
Confidence 667776666664210 013 445555555555431 1 11 3555555555
Q ss_pred CccccccccccCcCCCcEEEeccccccCCCccccccccccceEeccCCccCc--ccchhhcCCcccceeecCCccccCCC
Q 002021 458 NELTSIPLTFWNLKDILNLNFSSNFLTGSLPLEIGSLKVLVGIDLSRNNFSG--VIPTEIGGLKNLEYLFLGYNRLQGSI 535 (979)
Q Consensus 458 N~l~~lp~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~--~~p~~~~~l~~L~~L~Ls~N~l~~~~ 535 (979)
|+++.+|.. +++|+.|++++|++++ +|. .+++|+.|++++|++++ .+|..++. |+.|.+.+.+
T Consensus 327 N~l~~lp~~---~~~L~~L~L~~N~l~~-lp~---~l~~L~~L~L~~N~l~~l~~ip~~l~~--------L~~n~~~~~i 391 (454)
T 1jl5_A 327 NKLIELPAL---PPRLERLIASFNHLAE-VPE---LPQNLKQLHVEYNPLREFPDIPESVED--------LRMNSHLAEV 391 (454)
T ss_dssp SCCSCCCCC---CTTCCEEECCSSCCSC-CCC---CCTTCCEEECCSSCCSSCCCCCTTCCE--------EECCC-----
T ss_pred Ccccccccc---CCcCCEEECCCCcccc-ccc---hhhhccEEECCCCCCCcCCCChHHHHh--------hhhccccccc
Confidence 555555543 3556666666666653 443 35667777777777776 45555443 2346666666
Q ss_pred CCcccccccccccccccccccc--cCCccccCccccCeEeccCCcccccCCC
Q 002021 536 PNSFGDLISLKFLNLSNNNLSG--VIPASLEKLSYLEDLNLSFNQLEGKIPR 585 (979)
Q Consensus 536 p~~~~~l~~L~~L~Ls~N~l~~--~~p~~~~~l~~L~~L~L~~N~l~~~~p~ 585 (979)
|.. +++|+.||+++|++++ .+|.+ ++.|.+.+|.+.+.+|.
T Consensus 392 ~~~---~~~L~~L~ls~N~l~~~~~iP~s------l~~L~~~~~~~~~~~~~ 434 (454)
T 1jl5_A 392 PEL---PQNLKQLHVETNPLREFPDIPES------VEDLRMNSERVVDPYEF 434 (454)
T ss_dssp ----------------------------------------------------
T ss_pred ccc---cCcCCEEECCCCcCCccccchhh------HhheeCcCcccCCcccc
Confidence 653 4678888888888886 55543 55667788888877764
No 45
>1ogq_A PGIP-2, polygalacturonase inhibiting protein; inhibitor; HET: NAG; 1.7A {Phaseolus vulgaris} SCOP: c.10.2.8
Probab=100.00 E-value=6.6e-43 Score=384.63 Aligned_cols=293 Identities=32% Similarity=0.482 Sum_probs=265.9
Q ss_pred CCChhHHHHHHHHHHhcccCCCCccccccCCCCCCCc--cceeEeeCCC--CcEEEEEecCCCccc--cCCCCCcCCCCC
Q 002021 25 SSTITDQDALLALKAHITHDPTNFLAKNWNTSTPVCN--WTGVACEVHS--QRVTVLNISSLNLTG--TIPSQLGNLSSL 98 (979)
Q Consensus 25 ~~~~~~~~all~~k~~~~~~~~~~~~~~w~~~~~~c~--w~gv~c~~~~--~~v~~l~l~~~~l~g--~~~~~l~~l~~L 98 (979)
.|.++|++||++||+++ .||. .+ ++|..+++||. |.||+|+..+ ++|+.|+|++++++| .+|+.++++++|
T Consensus 2 ~c~~~~~~aL~~~k~~~-~~~~-~l-~~W~~~~~~C~~~w~gv~C~~~~~~~~l~~L~L~~~~l~~~~~~~~~l~~l~~L 78 (313)
T 1ogq_A 2 LCNPQDKQALLQIKKDL-GNPT-TL-SSWLPTTDCCNRTWLGVLCDTDTQTYRVNNLDLSGLNLPKPYPIPSSLANLPYL 78 (313)
T ss_dssp CSCHHHHHHHHHHHHHT-TCCG-GG-TTCCTTSCTTTTCSTTEEECCSSSCCCEEEEEEECCCCSSCEECCGGGGGCTTC
T ss_pred CCCHHHHHHHHHHHHhc-CCcc-cc-cCCCCCCCCCcCCCcceEeCCCCCCceEEEEECCCCCccCCcccChhHhCCCCC
Confidence 47789999999999999 4776 45 58988889998 9999998655 899999999999999 999999999999
Q ss_pred CeeeccC-CcccccCCccccccCcccEEecccccccccCCccccCCCCCcEEEccCCccCchhhhhhhccCCcccCCCCc
Q 002021 99 QSLNLSF-NRLFGSIPSAIFTTYTLKYVCLRGNQLSGTFPSFISNKSSLQHLDLSSNALSGEIRANICREIPREFGNLPE 177 (979)
Q Consensus 99 ~~L~L~~-n~~~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~~ip~~l~~l~~ 177 (979)
++|+|++ |++.+.+|..++.+++|++|+|++|++++.+|..++++++|++|||++|.+++. +|..++++++
T Consensus 79 ~~L~L~~~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~--------~p~~~~~l~~ 150 (313)
T 1ogq_A 79 NFLYIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKTLVTLDFSYNALSGT--------LPPSISSLPN 150 (313)
T ss_dssp SEEEEEEETTEESCCCGGGGGCTTCSEEEEEEECCEEECCGGGGGCTTCCEEECCSSEEESC--------CCGGGGGCTT
T ss_pred CeeeCCCCCcccccCChhHhcCCCCCEEECcCCeeCCcCCHHHhCCCCCCEEeCCCCccCCc--------CChHHhcCCC
Confidence 9999995 999999999999999999999999999999999999999999999999999864 7899999999
Q ss_pred cceeecccccccccccccccCCC-CCCceecCCCeeeecCCccccccCccceeeccCCCCcCCCcccccCCCCCcCEEEc
Q 002021 178 LELMSLAANNLQGKIPLKIGNLR-NLEKLDIGDNKLVGIAPIAIFNVSTLKILGLQDNSLSGCLSSIGYARLPNLEILSL 256 (979)
Q Consensus 178 L~~L~L~~N~l~~~~p~~~~~l~-~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~l~~L~~L~L 256 (979)
|++|+|++|++++.+|..++.++ +|++|+|++|++++..|..+..++ |+.|++++|++++..+. .|..+++|++|+|
T Consensus 151 L~~L~L~~N~l~~~~p~~l~~l~~~L~~L~L~~N~l~~~~~~~~~~l~-L~~L~Ls~N~l~~~~~~-~~~~l~~L~~L~L 228 (313)
T 1ogq_A 151 LVGITFDGNRISGAIPDSYGSFSKLFTSMTISRNRLTGKIPPTFANLN-LAFVDLSRNMLEGDASV-LFGSDKNTQKIHL 228 (313)
T ss_dssp CCEEECCSSCCEEECCGGGGCCCTTCCEEECCSSEEEEECCGGGGGCC-CSEEECCSSEEEECCGG-GCCTTSCCSEEEC
T ss_pred CCeEECcCCcccCcCCHHHhhhhhcCcEEECcCCeeeccCChHHhCCc-ccEEECcCCcccCcCCH-HHhcCCCCCEEEC
Confidence 99999999999999999999998 999999999999999999999997 99999999999876543 5789999999999
Q ss_pred cCCccccccCcccccCCCCcEEeccccccccccCccccccccccceeccccccccccchhhhhhcccCCCCccEEEccCC
Q 002021 257 WGNNFSGTIPRFIFNASKLSILDLEGNSFSGFIPNTFGNLRNLSWLVLSDNYLTSSTQELSFLSSLSNCKFLKYFDLSYN 336 (979)
Q Consensus 257 ~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~l~~l~~L~~L~Ls~N 336 (979)
++|++++.+|. +..+++|++|+|++|++++.+|..|..+++|++|+|++|++++..+. ...+++|+.+++++|
T Consensus 229 ~~N~l~~~~~~-~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~ip~------~~~l~~L~~l~l~~N 301 (313)
T 1ogq_A 229 AKNSLAFDLGK-VGLSKNLNGLDLRNNRIYGTLPQGLTQLKFLHSLNVSFNNLCGEIPQ------GGNLQRFDVSAYANN 301 (313)
T ss_dssp CSSEECCBGGG-CCCCTTCCEEECCSSCCEECCCGGGGGCTTCCEEECCSSEEEEECCC------STTGGGSCGGGTCSS
T ss_pred CCCceeeecCc-ccccCCCCEEECcCCcccCcCChHHhcCcCCCEEECcCCcccccCCC------CccccccChHHhcCC
Confidence 99999977766 78889999999999999999999999999999999999999854332 356777888888888
Q ss_pred C
Q 002021 337 P 337 (979)
Q Consensus 337 ~ 337 (979)
+
T Consensus 302 ~ 302 (313)
T 1ogq_A 302 K 302 (313)
T ss_dssp S
T ss_pred C
Confidence 6
No 46
>3v47_A TOLL-like receptor 5B and variable lymphocyte REC chimeric protein; innate immunity, leucine-rich repeat, innate immune receptor system; HET: NAG; 2.47A {Danio rerio} PDB: 3v44_A*
Probab=100.00 E-value=9.9e-42 Score=397.25 Aligned_cols=371 Identities=20% Similarity=0.238 Sum_probs=250.0
Q ss_pred CccceeecccccccccccccccCCCCCCceecCCCeee-ecCCccccccCccceeeccCCCCcCCCcccccCCCCCcCEE
Q 002021 176 PELELMSLAANNLQGKIPLKIGNLRNLEKLDIGDNKLV-GIAPIAIFNVSTLKILGLQDNSLSGCLSSIGYARLPNLEIL 254 (979)
Q Consensus 176 ~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~-~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~l~~L~~L 254 (979)
++|++|+|++|.+++..|..|+++++|++|+|++|++. .+.+..|.++++|++|+|++|++
T Consensus 30 ~~l~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~n~~~~~i~~~~~~~l~~L~~L~Ls~n~l------------------ 91 (455)
T 3v47_A 30 AHVNYVDLSLNSIAELNETSFSRLQDLQFLKVEQQTPGLVIRNNTFRGLSSLIILKLDYNQF------------------ 91 (455)
T ss_dssp TTCCEEECCSSCCCEECTTTTSSCTTCCEEECCCCSTTCEECTTTTTTCTTCCEEECTTCTT------------------
T ss_pred CccCEEEecCCccCcCChhHhccCccccEEECcCCcccceECcccccccccCCEEeCCCCcc------------------
Confidence 45666666666666555555666666666666666554 23344455555555555555554
Q ss_pred EccCCccccccCcccccCCCCcEEeccccccccccCcc--ccccccccceeccccccccccchhhhhhcccCCCCccEEE
Q 002021 255 SLWGNNFSGTIPRFIFNASKLSILDLEGNSFSGFIPNT--FGNLRNLSWLVLSDNYLTSSTQELSFLSSLSNCKFLKYFD 332 (979)
Q Consensus 255 ~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~~~~--~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~l~~l~~L~~L~ 332 (979)
++..|..+.++++|++|+|++|++++..+.. |+++++|++|+|++|+++...+.. .+.++++|++|+
T Consensus 92 -------~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~----~~~~l~~L~~L~ 160 (455)
T 3v47_A 92 -------LQLETGAFNGLANLEVLTLTQCNLDGAVLSGNFFKPLTSLEMLVLRDNNIKKIQPAS----FFLNMRRFHVLD 160 (455)
T ss_dssp -------CEECTTTTTTCTTCCEEECTTSCCBTHHHHSSTTTTCTTCCEEECCSSBCCSCCCCG----GGGGCTTCCEEE
T ss_pred -------CccChhhccCcccCCEEeCCCCCCCccccCcccccCcccCCEEECCCCccCccCccc----ccCCCCcccEEe
Confidence 4444444444444444444444444422222 444445555555555444432210 133445555555
Q ss_pred ccCCCCcccCCccccccccccccEEEccCccccCCCCcc--------ccCCCcccEEEecCCCCCchhHHhhhcC---CC
Q 002021 333 LSYNPLYRILPRTTVGNLSHSLEEFKMSNCNISGGIPEE--------ISNLTNLRTIYLGGNKLNGSILITLSKL---QK 401 (979)
Q Consensus 333 Ls~N~l~~~~~~~~~~~l~~~L~~L~L~~n~i~~~~p~~--------l~~l~~L~~L~L~~N~l~~~~~~~l~~l---~~ 401 (979)
+++|++..+.+..+..-...+|+.|++++|.+.+..+.. +..+++|++|++++|++++..+..+... ++
T Consensus 161 L~~n~l~~~~~~~l~~l~~~~L~~L~l~~n~l~~~~~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~~~~~~~ 240 (455)
T 3v47_A 161 LTFNKVKSICEEDLLNFQGKHFTLLRLSSITLQDMNEYWLGWEKCGNPFKNTSITTLDLSGNGFKESMAKRFFDAIAGTK 240 (455)
T ss_dssp CTTCCBSCCCTTTSGGGTTCEEEEEECTTCBCTTCSTTCTTHHHHCCTTTTCEEEEEECTTSCCCHHHHHHHHHHTTTCC
T ss_pred CCCCcccccChhhhhccccccccccccccCcccccchhhccccccccccccceeeeEecCCCcccccchhhhhccccccc
Confidence 555555444333322222235666666666666544433 3467889999999999998888877655 88
Q ss_pred CcEEEecCcccCCCccccccCCCCCceEecCCCcccccCCccccC--CCcCceEecCCCccccc-cccccCcCCCcEEEe
Q 002021 402 LQDLGLKDNKLEGSIPYDICNLAELYRLDLDGNKLSGSIPACFSN--LTSLRIVSLGSNELTSI-PLTFWNLKDILNLNF 478 (979)
Q Consensus 402 L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~--l~~L~~L~L~~N~l~~l-p~~~~~l~~L~~L~l 478 (979)
|+.|++++|.+.+.. +..+.+.+..+..+.. .++|++|++++|+++.+ |..+..+++|+.|++
T Consensus 241 L~~L~l~~~~~~~~~--------------~~~~~~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L 306 (455)
T 3v47_A 241 IQSLILSNSYNMGSS--------------FGHTNFKDPDNFTFKGLEASGVKTCDLSKSKIFALLKSVFSHFTDLEQLTL 306 (455)
T ss_dssp EEEEECTTCTTTSCC--------------TTCCSSCCCCTTTTGGGTTSCCCEEECCSSCCCEECTTTTTTCTTCCEEEC
T ss_pred eeeEeeccccccccc--------------cchhhhccCcccccccccccCceEEEecCccccccchhhcccCCCCCEEEC
Confidence 889999888766421 1223333333333333 36788888888888854 556788888899999
Q ss_pred ccccccCCCccccccccccceEeccCCccCcccchhhcCCcccceeecCCccccCCCCCccccccccccccccccccccc
Q 002021 479 SSNFLTGSLPLEIGSLKVLVGIDLSRNNFSGVIPTEIGGLKNLEYLFLGYNRLQGSIPNSFGDLISLKFLNLSNNNLSGV 558 (979)
Q Consensus 479 s~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~ 558 (979)
++|++++..|..|+.+++|+.|+|++|++++..|..|.++++|++|+|++|++++..|..|.++++|++|+|++|++++.
T Consensus 307 s~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~ 386 (455)
T 3v47_A 307 AQNEINKIDDNAFWGLTHLLKLNLSQNFLGSIDSRMFENLDKLEVLDLSYNHIRALGDQSFLGLPNLKELALDTNQLKSV 386 (455)
T ss_dssp TTSCCCEECTTTTTTCTTCCEEECCSSCCCEECGGGGTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCSCC
T ss_pred CCCcccccChhHhcCcccCCEEECCCCccCCcChhHhcCcccCCEEECCCCcccccChhhccccccccEEECCCCccccC
Confidence 99999888888999999999999999999988899999999999999999999988899999999999999999999988
Q ss_pred CCccccCccccCeEeccCCcccccCCCCCCC
Q 002021 559 IPASLEKLSYLEDLNLSFNQLEGKIPRGGSF 589 (979)
Q Consensus 559 ~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~ 589 (979)
.+..+..+++|+.|++++|+++|.+|...++
T Consensus 387 ~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~l 417 (455)
T 3v47_A 387 PDGIFDRLTSLQKIWLHTNPWDCSCPRIDYL 417 (455)
T ss_dssp CTTTTTTCTTCCEEECCSSCBCCCTTTTHHH
T ss_pred CHhHhccCCcccEEEccCCCcccCCCcchHH
Confidence 7778899999999999999999999964433
No 47
>3v5w_A G-protein coupled receptor kinase 2; inhibitor complex, protein kinase, beta propeller, RGS homol domain; HET: 8PR; 2.07A {Homo sapiens} PDB: 3cik_A* 3krw_A* 3krx_A* 1omw_A 1ym7_A 2bcj_A* 3uzs_A 3uzt_A 3pvu_A* 3psc_A* 3pvw_A* 1bak_A
Probab=100.00 E-value=3.8e-43 Score=409.99 Aligned_cols=249 Identities=21% Similarity=0.291 Sum_probs=201.3
Q ss_pred hCCCCCCceeeeecceEEEEEE-cCCCcEEEEEEecccc---ccchhcHHHH---HHHHHhcCCCCeeeEEEeeccCCee
Q 002021 681 TDGFSENNLIGRGGFGSVYKAS-LGDGMEVAVKVFTSQC---GRAFKSFDVE---CEIMKSIRHRNLIKVISSCSNEEFK 753 (979)
Q Consensus 681 ~~~~~~~~~lG~G~~g~Vy~~~-~~~~~~vAvK~~~~~~---~~~~~~~~~E---~~~l~~l~h~niv~l~~~~~~~~~~ 753 (979)
.++|++.+.||+|+||+||+|+ ..+|+.||||++.+.. ......+.+| +++++.++|||||+++++|.+++..
T Consensus 188 lddf~i~k~LG~G~fG~V~la~~~~tg~~~AiK~i~K~~i~~~~~~~~~~~E~~~l~ll~~~~HP~IV~l~~~f~~~~~l 267 (689)
T 3v5w_A 188 MNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKL 267 (689)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHSSSCCTTBCCEEEEEECSSEE
T ss_pred hHHeEEEEEEecccCeEEEEEEECCCCCEEEEEEEeHHHcchhhhHHHHHHHHHHHHHHhhCCCCCEeEEEEEEEECCEE
Confidence 3679999999999999999994 5679999999996432 1222333344 5566677899999999999999999
Q ss_pred EEEEEecCCCccceeeccCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCEEeCCCCcEEEEeeccccccC
Q 002021 754 ALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFSIAKMLT 833 (979)
Q Consensus 754 ~lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~i~H~Dik~~NIll~~~~~~kl~Dfg~~~~~~ 833 (979)
|+||||++||+|.+++.+.+ .+++..++.++.||+.||+||| +++|+||||||+|||++.+|.+||+|||+|+...
T Consensus 268 ylVmEy~~GGdL~~~l~~~~-~l~E~~a~~y~~qIl~aL~yLH---~~gIiHRDLKPeNILld~~G~vKL~DFGlA~~~~ 343 (689)
T 3v5w_A 268 SFILDLMNGGDLHYHLSQHG-VFSEADMRFYAAEIILGLEHMH---NRFVVYRDLKPANILLDEHGHVRISDLGLACDFS 343 (689)
T ss_dssp EEEECCCCSCBHHHHHHHHC-CCCHHHHHHHHHHHHHHHHHHH---TTTEECCCCSGGGEEECTTSCEEECCCTTCEECS
T ss_pred EEEEecCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---HCCccccCCchHHeEEeCCCCEEecccceeeecC
Confidence 99999999999999997654 6999999999999999999999 9999999999999999999999999999998764
Q ss_pred CCCCcceecccccCCCCCCccccCC-CCCCCchhHHHHHHHHHHHHcCCCCCcccccCcc-hHhHhhhhhcCCccchhhc
Q 002021 834 GEDQSMIQTQTLATIGYMAPEYGRE-GRVSANGDVYSFGIMLMETFTGKKPTDEIFNGEM-TLKHWVNDWLPISTMEVVD 911 (979)
Q Consensus 834 ~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwslG~il~el~tg~~P~~~~~~~~~-~~~~~~~~~~~~~~~~~~~ 911 (979)
... ....+||+.|||||++.. ..|+.++||||+||++|||++|+.||........ .+.......
T Consensus 344 ~~~----~~t~~GTp~YmAPEvl~~~~~y~~~vDiWSLGvilYEmLtG~~PF~~~~~~~~~~i~~~i~~~---------- 409 (689)
T 3v5w_A 344 KKK----PHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTM---------- 409 (689)
T ss_dssp SCC----CCSCCSCGGGCCHHHHSTTCCCCTHHHHHHHHHHHHHHHHSSCTTCGGGCCCHHHHHHHHHHC----------
T ss_pred CCC----CCCccCCcCccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhhcCC----------
Confidence 322 245689999999999865 5799999999999999999999999976332211 111100000
Q ss_pred ccccCchhhhhHHHHHHHHHHHHHHHhccccCcCCCCC-----HHHHHHH
Q 002021 912 ANLLSQEDIHFVAKEQCVSFVFNLAMECTMEFPKQRIN-----AKEIVTK 956 (979)
Q Consensus 912 ~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps-----~~eil~~ 956 (979)
....+..+++++.+|+.+|++.||.+|++ ++||++|
T Consensus 410 ---------~~~~p~~~S~~a~dLI~~lL~~dP~~Rl~~~~~ga~ei~~H 450 (689)
T 3v5w_A 410 ---------AVELPDSFSPELRSLLEGLLQRDVNRRLGCLGRGAQEVKES 450 (689)
T ss_dssp ---------CCCCCTTSCHHHHHHHHHHTCSCGGGCTTCSSSTHHHHTTS
T ss_pred ---------CCCCCccCCHHHHHHHHHHccCCHhHCCCCCCCCHHHHhcC
Confidence 00112345677999999999999999998 7888876
No 48
>3v47_A TOLL-like receptor 5B and variable lymphocyte REC chimeric protein; innate immunity, leucine-rich repeat, innate immune receptor system; HET: NAG; 2.47A {Danio rerio} PDB: 3v44_A*
Probab=100.00 E-value=6.2e-42 Score=398.96 Aligned_cols=365 Identities=21% Similarity=0.273 Sum_probs=200.5
Q ss_pred CCCCeeeccCCcccccCCccccccCcccEEecccccccccC-CccccCCCCCcEEEccCCccCchhhhhhhccCCcccCC
Q 002021 96 SSLQSLNLSFNRLFGSIPSAIFTTYTLKYVCLRGNQLSGTF-PSFISNKSSLQHLDLSSNALSGEIRANICREIPREFGN 174 (979)
Q Consensus 96 ~~L~~L~L~~n~~~~~~p~~~~~l~~L~~L~L~~n~l~~~~-p~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~~ip~~l~~ 174 (979)
++|++|||++|++++..|..+..+++|++|+|++|.+.+.+ |..|+++++|++|||++|.+++. .|..|++
T Consensus 30 ~~l~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~n~~~~~i~~~~~~~l~~L~~L~Ls~n~l~~~--------~~~~~~~ 101 (455)
T 3v47_A 30 AHVNYVDLSLNSIAELNETSFSRLQDLQFLKVEQQTPGLVIRNNTFRGLSSLIILKLDYNQFLQL--------ETGAFNG 101 (455)
T ss_dssp TTCCEEECCSSCCCEECTTTTSSCTTCCEEECCCCSTTCEECTTTTTTCTTCCEEECTTCTTCEE--------CTTTTTT
T ss_pred CccCEEEecCCccCcCChhHhccCccccEEECcCCcccceECcccccccccCCEEeCCCCccCcc--------ChhhccC
Confidence 56666777776666666666666666777777766665444 34566667777777777666542 4566666
Q ss_pred CCccceeeccccccccccccc--ccCCCCCCceecCCCeeeecCCcc-ccccCccceeeccCCCCcCCCcccccCCC--C
Q 002021 175 LPELELMSLAANNLQGKIPLK--IGNLRNLEKLDIGDNKLVGIAPIA-IFNVSTLKILGLQDNSLSGCLSSIGYARL--P 249 (979)
Q Consensus 175 l~~L~~L~L~~N~l~~~~p~~--~~~l~~L~~L~Ls~N~l~~~~p~~-l~~l~~L~~L~L~~N~l~~~~~~~~~~~l--~ 249 (979)
+++|++|+|++|++++.+|.. ++++++|++|+|++|++++..|.. +.++++|+.|++++|++++..+.. +..+ .
T Consensus 102 l~~L~~L~L~~n~l~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~-l~~l~~~ 180 (455)
T 3v47_A 102 LANLEVLTLTQCNLDGAVLSGNFFKPLTSLEMLVLRDNNIKKIQPASFFLNMRRFHVLDLTFNKVKSICEED-LLNFQGK 180 (455)
T ss_dssp CTTCCEEECTTSCCBTHHHHSSTTTTCTTCCEEECCSSBCCSCCCCGGGGGCTTCCEEECTTCCBSCCCTTT-SGGGTTC
T ss_pred cccCCEEeCCCCCCCccccCcccccCcccCCEEECCCCccCccCcccccCCCCcccEEeCCCCcccccChhh-hhccccc
Confidence 677777777777666544443 666667777777777776665554 566677777777777666543321 2222 4
Q ss_pred CcCEEEccCCccccccCcc--------cccCCCCcEEeccccccccccCcccccc---ccccceeccccccccccchhhh
Q 002021 250 NLEILSLWGNNFSGTIPRF--------IFNASKLSILDLEGNSFSGFIPNTFGNL---RNLSWLVLSDNYLTSSTQELSF 318 (979)
Q Consensus 250 ~L~~L~L~~N~l~~~~p~~--------l~~l~~L~~L~Ls~N~l~~~~~~~~~~l---~~L~~L~Ls~N~l~~~~~~~~~ 318 (979)
+|+.|++++|.+.+..+.. +..+++|++|++++|++++..|..+..+ ++|+.|++++|.+....
T Consensus 181 ~L~~L~l~~n~l~~~~~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~----- 255 (455)
T 3v47_A 181 HFTLLRLSSITLQDMNEYWLGWEKCGNPFKNTSITTLDLSGNGFKESMAKRFFDAIAGTKIQSLILSNSYNMGSS----- 255 (455)
T ss_dssp EEEEEECTTCBCTTCSTTCTTHHHHCCTTTTCEEEEEECTTSCCCHHHHHHHHHHTTTCCEEEEECTTCTTTSCC-----
T ss_pred cccccccccCcccccchhhccccccccccccceeeeEecCCCcccccchhhhhccccccceeeEeeccccccccc-----
Confidence 5666666666665433322 2244566666666666666555555443 55555555555443211
Q ss_pred hhcccCCCCccEEEccCCCCcccCCccccccccccccEEEccCccccCCCCccccCCCcccEEEecCCCCCchhHHhhhc
Q 002021 319 LSSLSNCKFLKYFDLSYNPLYRILPRTTVGNLSHSLEEFKMSNCNISGGIPEEISNLTNLRTIYLGGNKLNGSILITLSK 398 (979)
Q Consensus 319 ~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~~L~~L~L~~n~i~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~l~~ 398 (979)
+..+.+.......+.+....+|++|++++|++++.+|..++.+++|++|+|++|++++..+.
T Consensus 256 --------------~~~~~~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~---- 317 (455)
T 3v47_A 256 --------------FGHTNFKDPDNFTFKGLEASGVKTCDLSKSKIFALLKSVFSHFTDLEQLTLAQNEINKIDDN---- 317 (455)
T ss_dssp --------------TTCCSSCCCCTTTTGGGTTSCCCEEECCSSCCCEECTTTTTTCTTCCEEECTTSCCCEECTT----
T ss_pred --------------cchhhhccCcccccccccccCceEEEecCccccccchhhcccCCCCCEEECCCCcccccChh----
Confidence 01111111111111111113445555555555544455555555555555555555544444
Q ss_pred CCCCcEEEecCcccCCCccccccCCCCCceEecCCCcccccCCccccCCCcCceEecCCCccccc-cccccCcCCCcEEE
Q 002021 399 LQKLQDLGLKDNKLEGSIPYDICNLAELYRLDLDGNKLSGSIPACFSNLTSLRIVSLGSNELTSI-PLTFWNLKDILNLN 477 (979)
Q Consensus 399 l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~l-p~~~~~l~~L~~L~ 477 (979)
.|.++++|++|+|++|++++..|..|.++++|++|+|++|+++.+ |..+..+++|+.|+
T Consensus 318 --------------------~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~ 377 (455)
T 3v47_A 318 --------------------AFWGLTHLLKLNLSQNFLGSIDSRMFENLDKLEVLDLSYNHIRALGDQSFLGLPNLKELA 377 (455)
T ss_dssp --------------------TTTTCTTCCEEECCSSCCCEECGGGGTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEE
T ss_pred --------------------HhcCcccCCEEECCCCccCCcChhHhcCcccCCEEECCCCcccccChhhccccccccEEE
Confidence 444445555555555555444444455555555555555555543 33444555555555
Q ss_pred eccccccCCCccccccccccceEeccCCccCcccc
Q 002021 478 FSSNFLTGSLPLEIGSLKVLVGIDLSRNNFSGVIP 512 (979)
Q Consensus 478 ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p 512 (979)
+++|++++..+..+..+++|+.|+|++|++++..|
T Consensus 378 L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~ 412 (455)
T 3v47_A 378 LDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCP 412 (455)
T ss_dssp CCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCCTT
T ss_pred CCCCccccCCHhHhccCCcccEEEccCCCcccCCC
Confidence 55555554444455666666666666666665544
No 49
>2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A*
Probab=100.00 E-value=3.4e-42 Score=381.32 Aligned_cols=282 Identities=33% Similarity=0.536 Sum_probs=229.7
Q ss_pred ccHHHHHHhhCCCCCCceeeeecceEEEEEEcCCCcEEEEEEeccccccchhcHHHHHHHHHhcCCCCeeeEEEeeccCC
Q 002021 672 FSYLELCRATDGFSENNLIGRGGFGSVYKASLGDGMEVAVKVFTSQCGRAFKSFDVECEIMKSIRHRNLIKVISSCSNEE 751 (979)
Q Consensus 672 ~~~~~~~~~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~ 751 (979)
+++.++...+++|+..+.||+|+||.||+|...+++.||||++........+.+.+|+++++.++||||+++++++.+++
T Consensus 29 ~~~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~ 108 (321)
T 2qkw_B 29 VPLVDLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEEFETEIETLSFCRHPHLVSLIGFCDERN 108 (321)
T ss_dssp -CCSCCCCCCCCCSCCCCSCBCSSSEEEEEECTTCCEEEEEECCSCCSSHHHHHHHHHHGGGSCCCTTBCCEEEECCCTT
T ss_pred ecHHHHHHHHhccCccceeecCCCeeEEEEEECCCCEEEEEEecccChHHHHHHHHHHHHHHhCCCCCEeeEEEEEcCCC
Confidence 33344556778999999999999999999998889999999987665566678999999999999999999999999999
Q ss_pred eeEEEEEecCCCccceeeccCC---CCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCEEeCCCCcEEEEeecc
Q 002021 752 FKALVLEYMPHGSLEKYLYSSN---CILDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFSI 828 (979)
Q Consensus 752 ~~~lv~E~~~~g~L~~~l~~~~---~~l~~~~~~~i~~~ia~~L~~LH~~~~~~i~H~Dik~~NIll~~~~~~kl~Dfg~ 828 (979)
..++||||+++|+|.+++.... ..+++.+++.++.|++.||+||| +++|+||||||+||+++.++.+||+|||+
T Consensus 109 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH---~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~ 185 (321)
T 2qkw_B 109 EMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGAARGLHYLH---TRAIIHRDVKSINILLDENFVPKITDFGI 185 (321)
T ss_dssp CCEEEEECCTTCBTGGGSSSSCCCSCCCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCCSTTEEECTTCCEEECCCTT
T ss_pred eEEEEEEcCCCCcHHHHHhccCCCccccCHHHHHHHHHHHHHHHHHhc---CCCeecCCCCHHHEEECCCCCEEEeeccc
Confidence 9999999999999999997653 35899999999999999999999 89999999999999999999999999999
Q ss_pred ccccCCCCCcceecccccCCCCCCccccCCCCCCCchhHHHHHHHHHHHHcCCCCCcccccCcc-hHhHhhhhhc-CCcc
Q 002021 829 AKMLTGEDQSMIQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFTGKKPTDEIFNGEM-TLKHWVNDWL-PIST 906 (979)
Q Consensus 829 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~tg~~P~~~~~~~~~-~~~~~~~~~~-~~~~ 906 (979)
+................||+.|+|||.+.++.++.++||||+|+++|||++|+.||......+. ....|..... ....
T Consensus 186 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 265 (321)
T 2qkw_B 186 SKKGTELDQTHLSTVVKGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNLAEWAVESHNNGQL 265 (321)
T ss_dssp CEECSSSSCCCCBCCCEEETTTCCHHHHHHCBCCTHHHHHHHHHHHHHHHHCCTTCSCSSSSSCCCHHHHTHHHHTTTCC
T ss_pred ccccccccccccccccCCCccccCHHHhcCCCCCcccchHhHHHHHHHHHhCCCcccccCcHHHHHHHHHhhhccccccH
Confidence 9875433333333445689999999999888999999999999999999999999976443322 2233322211 1112
Q ss_pred chhhcccccCchhhhhHHHHHHHHHHHHHHHhccccCcCCCCCHHHHHHHHHHhHH
Q 002021 907 MEVVDANLLSQEDIHFVAKEQCVSFVFNLAMECTMEFPKQRINAKEIVTKLLKIRD 962 (979)
Q Consensus 907 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~eil~~L~~~~~ 962 (979)
....++.... .....++..+.+++.+||+.||++|||+.|++++|+++.+
T Consensus 266 ~~~~~~~~~~------~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~l~ 315 (321)
T 2qkw_B 266 EQIVDPNLAD------KIRPESLRKFGDTAVKCLALSSEDRPSMGDVLWKLEYALR 315 (321)
T ss_dssp CSSSSSSCTT------CSCHHHHHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred HHhcChhhcc------ccCHHHHHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHhh
Confidence 2222222211 1224567789999999999999999999999999999875
No 50
>3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3ulz_A* 3tl8_A*
Probab=100.00 E-value=2e-41 Score=376.20 Aligned_cols=282 Identities=35% Similarity=0.550 Sum_probs=231.3
Q ss_pred ccccccHHHHHHhhCCCCCCceeeeecceEEEEEEcCCCcEEEEEEeccccc-cchhcHHHHHHHHHhcCCCCeeeEEEe
Q 002021 668 SRRMFSYLELCRATDGFSENNLIGRGGFGSVYKASLGDGMEVAVKVFTSQCG-RAFKSFDVECEIMKSIRHRNLIKVISS 746 (979)
Q Consensus 668 ~~~~~~~~~~~~~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~vAvK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~ 746 (979)
....+++.++....++|+..+.||+|+||.||+|...+|+.||||++..... .....+.+|+++++.++||||++++++
T Consensus 16 ~~~~~~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~ 95 (326)
T 3uim_A 16 QLKRFSLRELQVASDNFSNKNILGRGGFGKVYKGRLADGTLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLRGF 95 (326)
T ss_dssp CCEECCTHHHHTTTTSSCSTTEEECCSSSEEEEECCSSSCCEEEEECCC-----CCCHHHHHHHGGGTCCCTTBCCCCEE
T ss_pred ccceecHHHHHHHhhccccceeEecCCCcEEEEEEecCCCEEEEEEeccccCchHHHHHHHHHHHHHhccCCCccceEEE
Confidence 3456888999999999999999999999999999887899999999875532 234468999999999999999999999
Q ss_pred eccCCeeEEEEEecCCCccceeeccCC---CCCCHHHHHHHHHHHHHHHHHHhcCCCC---CeEecCCCCCCEEeCCCCc
Q 002021 747 CSNEEFKALVLEYMPHGSLEKYLYSSN---CILDIFQRLNIMIDVASALEYLHFGYSA---PVIHCDLKPSNVLLDDNMV 820 (979)
Q Consensus 747 ~~~~~~~~lv~E~~~~g~L~~~l~~~~---~~l~~~~~~~i~~~ia~~L~~LH~~~~~---~i~H~Dik~~NIll~~~~~ 820 (979)
+.+++..++||||+++|+|.+++.... ..+++..+..++.|++.||+||| ++ +|+||||||+||+++.++.
T Consensus 96 ~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH---~~~~~~ivH~Dlkp~Nil~~~~~~ 172 (326)
T 3uim_A 96 CMTPTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRIALGSARGLAYLH---DHCDPKIIHRDVKAANILLDEEFE 172 (326)
T ss_dssp ECCSSCCEEEEECCTTCBHHHHHHCCSTTCCCCCHHHHHHHHHHHHHHHHHHH---HSSSSCEECCCCSGGGEEECTTCC
T ss_pred EecCCceEEEEEeccCCCHHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHH---hCCCCCeEeCCCchhhEEECCCCC
Confidence 999999999999999999999987653 35899999999999999999999 66 9999999999999999999
Q ss_pred EEEEeeccccccCCCCCcceecccccCCCCCCccccCCCCCCCchhHHHHHHHHHHHHcCCCCCcccc---cCcchHhHh
Q 002021 821 AHLSDFSIAKMLTGEDQSMIQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFTGKKPTDEIF---NGEMTLKHW 897 (979)
Q Consensus 821 ~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~tg~~P~~~~~---~~~~~~~~~ 897 (979)
+||+|||++....... ........||+.|+|||.+.+..++.++||||+|+++|||++|+.||+... ........|
T Consensus 173 ~kl~Dfg~~~~~~~~~-~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~ 251 (326)
T 3uim_A 173 AVVGDFGLAKLMDYKD-THVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDW 251 (326)
T ss_dssp EEECCCSSCEECCSSS-SCEECCCCSCGGGCCHHHHHHSEECHHHHHHHHHHHHHHHHHCCCSBCHHHHTTTSCSBHHHH
T ss_pred EEeccCccccccCccc-ccccccccCCcCccCHHHhccCCCCccccchhHHHHHHHHHhCCCcccccccccccchhHHHH
Confidence 9999999998764332 223344569999999999988889999999999999999999999996422 233344455
Q ss_pred hhhhcCCc-cchhhcccccCchhhhhHHHHHHHHHHHHHHHhccccCcCCCCCHHHHHHHHHH
Q 002021 898 VNDWLPIS-TMEVVDANLLSQEDIHFVAKEQCVSFVFNLAMECTMEFPKQRINAKEIVTKLLK 959 (979)
Q Consensus 898 ~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~eil~~L~~ 959 (979)
+....... .....+..... .....++..+.+++.+||+.||++|||+.|++++|++
T Consensus 252 ~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~ 308 (326)
T 3uim_A 252 VKGLLKEKKLEALVDVDLQG------NYKDEEVEQLIQVALLCTQSSPMERPKMSEVVRMLEG 308 (326)
T ss_dssp HTTTTSSCCSTTSSCTTCTT------SCCHHHHHHHHHHHHHHTCSCGGGSCCHHHHHHHHHT
T ss_pred HHHHhhchhhhhhcChhhcc------ccCHHHHHHHHHHHHHHhCcCCccCCCHHHHHHHhcC
Confidence 54444332 22222222211 1224556789999999999999999999999999985
No 51
>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens}
Probab=100.00 E-value=1e-41 Score=375.56 Aligned_cols=264 Identities=23% Similarity=0.358 Sum_probs=218.1
Q ss_pred CCCCCCceeeeecceEEEEEEc-CCCcEEEEEEeccccccchhcHHHHHHHHHhcCCCCeeeEEEeeccCCeeEEEEEec
Q 002021 682 DGFSENNLIGRGGFGSVYKASL-GDGMEVAVKVFTSQCGRAFKSFDVECEIMKSIRHRNLIKVISSCSNEEFKALVLEYM 760 (979)
Q Consensus 682 ~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~E~~ 760 (979)
++|...+.||+|+||.||+|.. .+++.||+|++........+.+.+|++++++++||||+++++++.+++..++||||+
T Consensus 10 ~~~~~~~~lG~G~~g~V~~~~~~~~~~~va~K~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~ 89 (310)
T 3s95_A 10 SDLIHGEVLGKGCFGQAIKVTHRETGEVMVMKELIRFDEETQRTFLKEVKVMRCLEHPNVLKFIGVLYKDKRLNFITEYI 89 (310)
T ss_dssp GGEEEEEEEECCSSEEEEEEEETTTCCEEEEEEESCCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEECC
T ss_pred hHeeccceecCCCCEEEEEEEECCCCcEEEEEEeccCCHHHHHHHHHHHHHHHhCCCcCcccEEEEEecCCeeEEEEEec
Confidence 5688889999999999999954 579999999987655556778999999999999999999999999999999999999
Q ss_pred CCCccceeeccCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCEEeCCCCcEEEEeeccccccCCCCCcc-
Q 002021 761 PHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFSIAKMLTGEDQSM- 839 (979)
Q Consensus 761 ~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~i~H~Dik~~NIll~~~~~~kl~Dfg~~~~~~~~~~~~- 839 (979)
++|+|.+++......+++.+++.++.|+++||+||| +++|+||||||+||+++.++.+||+|||++..........
T Consensus 90 ~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH---~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~ 166 (310)
T 3s95_A 90 KGGTLRGIIKSMDSQYPWSQRVSFAKDIASGMAYLH---SMNIIHRDLNSHNCLVRENKNVVVADFGLARLMVDEKTQPE 166 (310)
T ss_dssp TTCBHHHHHHHCCTTSCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSTTSEEECTTSCEEECCCTTCEECC-------
T ss_pred CCCcHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHH---hCCccCCCCCcCeEEECCCCCEEEeecccceeccccccccc
Confidence 999999999887678999999999999999999999 9999999999999999999999999999998764332211
Q ss_pred -----------eecccccCCCCCCccccCCCCCCCchhHHHHHHHHHHHHcCCCCCcccccCcchHhHhhhhhcCCccch
Q 002021 840 -----------IQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFTGKKPTDEIFNGEMTLKHWVNDWLPISTME 908 (979)
Q Consensus 840 -----------~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~ 908 (979)
......||+.|+|||++.+..+++++||||+|+++|||++|..||..............
T Consensus 167 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~~~~~---------- 236 (310)
T 3s95_A 167 GLRSLKKPDRKKRYTVVGNPYWMAPEMINGRSYDEKVDVFSFGIVLCEIIGRVNADPDYLPRTMDFGLNV---------- 236 (310)
T ss_dssp -------------CCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHTCCSSTTTSCBCTTSSBCH----------
T ss_pred ccccccccccccccccCCCcceeCHHHhcCCCCCcHHHHHHHHHHHHHHhcCCCCCcchhhhHHHHhhhh----------
Confidence 11145789999999999999999999999999999999999999875433222111000
Q ss_pred hhcccccCchhhhhHHHHHHHHHHHHHHHhccccCcCCCCCHHHHHHHHHHhHHhhcc
Q 002021 909 VVDANLLSQEDIHFVAKEQCVSFVFNLAMECTMEFPKQRINAKEIVTKLLKIRDSLLR 966 (979)
Q Consensus 909 ~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~eil~~L~~~~~~~~~ 966 (979)
........+..+++.+.+++.+||+.||++|||+.|+++.|+++......
T Consensus 237 --------~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~~l~~~L~~l~~~~~~ 286 (310)
T 3s95_A 237 --------RGFLDRYCPPNCPPSFFPITVRCCDLDPEKRPSFVKLEHWLETLRMHLAG 286 (310)
T ss_dssp --------HHHHHHTCCTTCCTTHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHHHH
T ss_pred --------hccccccCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHhccC
Confidence 00001111234556789999999999999999999999999999887654
No 52
>3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} SCOP: d.144.1.7 PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A*
Probab=100.00 E-value=3.6e-41 Score=368.32 Aligned_cols=251 Identities=25% Similarity=0.319 Sum_probs=210.0
Q ss_pred hCCCCCCceeeeecceEEEEEE-cCCCcEEEEEEeccccccchhcHHHHHHHHHhcCCCCeeeEEEeeccCCeeEEEEEe
Q 002021 681 TDGFSENNLIGRGGFGSVYKAS-LGDGMEVAVKVFTSQCGRAFKSFDVECEIMKSIRHRNLIKVISSCSNEEFKALVLEY 759 (979)
Q Consensus 681 ~~~~~~~~~lG~G~~g~Vy~~~-~~~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~E~ 759 (979)
.++|+..+.||+|+||.||+|. ..+++.||||++........+.+.+|+.+++.++||||+++++++..++..++||||
T Consensus 19 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~ 98 (297)
T 3fxz_A 19 KKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEY 98 (297)
T ss_dssp GGTBCCCEEEEEETTEEEEEEEBTTTCCEEEEEEEEGGGCSCHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEEC
T ss_pred hhceeeeeeeccCCCeEEEEEEECCCCcEEEEEEeecccccHHHHHHHHHHHHhcCCCCCCCeEeEEEEECCEEEEEEEC
Confidence 4679999999999999999995 567999999999766555667789999999999999999999999999999999999
Q ss_pred cCCCccceeeccCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCEEeCCCCcEEEEeeccccccCCCCCcc
Q 002021 760 MPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFSIAKMLTGEDQSM 839 (979)
Q Consensus 760 ~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~i~H~Dik~~NIll~~~~~~kl~Dfg~~~~~~~~~~~~ 839 (979)
+++|+|.+++... .+++.++..++.|++.||+||| +++|+||||||+||+++.++.+||+|||++........
T Consensus 99 ~~~~~L~~~~~~~--~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~-- 171 (297)
T 3fxz_A 99 LAGGSLTDVVTET--CMDEGQIAAVCRECLQALEFLH---SNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQS-- 171 (297)
T ss_dssp CTTCBHHHHHHHS--CCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECTTCCEEECCCTTCEECCSTTC--
T ss_pred CCCCCHHHHHhhc--CCCHHHHHHHHHHHHHHHHHHH---hCCceeCCCCHHHEEECCCCCEEEeeCCCceecCCccc--
Confidence 9999999998765 5899999999999999999999 99999999999999999999999999999987643322
Q ss_pred eecccccCCCCCCccccCCCCCCCchhHHHHHHHHHHHHcCCCCCcccccCcchHhHhhhhhcCCccchhhcccccCchh
Q 002021 840 IQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFTGKKPTDEIFNGEMTLKHWVNDWLPISTMEVVDANLLSQED 919 (979)
Q Consensus 840 ~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 919 (979)
......||+.|+|||++.+..+++++||||+||++|||++|+.||.......... .......
T Consensus 172 ~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~-~~~~~~~----------------- 233 (297)
T 3fxz_A 172 KRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALY-LIATNGT----------------- 233 (297)
T ss_dssp CBCCCCSCGGGCCHHHHHCSCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHH-HHHHHCS-----------------
T ss_pred ccCCccCCcCccChhhhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHH-HHHhCCC-----------------
Confidence 2345679999999999999999999999999999999999999996532111111 1000000
Q ss_pred hhhHHHHHHHHHHHHHHHhccccCcCCCCCHHHHHHH
Q 002021 920 IHFVAKEQCVSFVFNLAMECTMEFPKQRINAKEIVTK 956 (979)
Q Consensus 920 ~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~eil~~ 956 (979)
.....+..++..+.+++.+||+.||++|||+.|+++|
T Consensus 234 ~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~h 270 (297)
T 3fxz_A 234 PELQNPEKLSAIFRDFLNRCLEMDVEKRGSAKELLQH 270 (297)
T ss_dssp CCCSCGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTTC
T ss_pred CCCCCccccCHHHHHHHHHHccCChhHCcCHHHHhhC
Confidence 0011123456678999999999999999999999875
No 53
>3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 4asx_A* 2qlu_A*
Probab=100.00 E-value=1.4e-41 Score=376.25 Aligned_cols=276 Identities=22% Similarity=0.291 Sum_probs=212.0
Q ss_pred hCCCCCCceeeeecceEEEEEEcCCCcEEEEEEeccccccchhcHHHHHHHHHhcCCCCeeeEEEeeccCC----eeEEE
Q 002021 681 TDGFSENNLIGRGGFGSVYKASLGDGMEVAVKVFTSQCGRAFKSFDVECEIMKSIRHRNLIKVISSCSNEE----FKALV 756 (979)
Q Consensus 681 ~~~~~~~~~lG~G~~g~Vy~~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~----~~~lv 756 (979)
.++|+..+.||+|+||.||+|+.. ++.||||++.... .....+.+|+.++++++||||+++++++.+.. ..++|
T Consensus 23 ~~~y~~~~~lg~G~~g~Vy~~~~~-~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~lv 100 (322)
T 3soc_A 23 SMPLQLLEVKARGRFGCVWKAQLL-NEYVAVKIFPIQD-KQSWQNEYEVYSLPGMKHENILQFIGAEKRGTSVDVDLWLI 100 (322)
T ss_dssp TEEEEEEEEEECSTTCEEEEEEET-TEEEEEEEECGGG-HHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEEEEE
T ss_pred hhhchhhheecccCceEEEEEEEC-CCEEEEEEeecCc-hHHHHHHHHHHHHhcCCCCCchhhcceeccCCCCCceEEEE
Confidence 367888999999999999999874 7999999986542 23345566888999999999999999987644 46999
Q ss_pred EEecCCCccceeeccCCCCCCHHHHHHHHHHHHHHHHHHhcCCCC----------CeEecCCCCCCEEeCCCCcEEEEee
Q 002021 757 LEYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGYSA----------PVIHCDLKPSNVLLDDNMVAHLSDF 826 (979)
Q Consensus 757 ~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~----------~i~H~Dik~~NIll~~~~~~kl~Df 826 (979)
|||+++|+|.+++... .+++..++.++.|++.||+||| +. +|+||||||+||+++.++.+||+||
T Consensus 101 ~e~~~~g~L~~~l~~~--~~~~~~~~~i~~qi~~al~~LH---~~~~~l~~~~~~~ivH~Dlkp~Nill~~~~~~kL~DF 175 (322)
T 3soc_A 101 TAFHEKGSLSDFLKAN--VVSWNELCHIAETMARGLAYLH---EDIPGLKDGHKPAISHRDIKSKNVLLKNNLTACIADF 175 (322)
T ss_dssp EECCTTCBHHHHHHHC--CBCHHHHHHHHHHHHHHHHHHT---CCEEEETTEEECEEECSCCSGGGEEECTTCCEEECCC
T ss_pred EecCCCCCHHHHHHhc--CCCHHHHHHHHHHHHHHHHHHH---hhccccccccCCCEEeCCCChHhEEECCCCeEEEccC
Confidence 9999999999999765 4899999999999999999999 88 9999999999999999999999999
Q ss_pred ccccccCCCCCcceecccccCCCCCCccccCC-----CCCCCchhHHHHHHHHHHHHcCCCCCcccccCcc-hHhHhhhh
Q 002021 827 SIAKMLTGEDQSMIQTQTLATIGYMAPEYGRE-----GRVSANGDVYSFGIMLMETFTGKKPTDEIFNGEM-TLKHWVND 900 (979)
Q Consensus 827 g~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-----~~~~~~~DvwslG~il~el~tg~~P~~~~~~~~~-~~~~~~~~ 900 (979)
|+++...............||+.|+|||++.+ ..++.++|||||||++|||+||+.||........ .+......
T Consensus 176 g~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~~~~~~~~~ 255 (322)
T 3soc_A 176 GLALKFEAGKSAGDTHGQVGTRRYMAPEVLEGAINFQRDAFLRIDMYAMGLVLWELASRCTAADGPVDEYMLPFEEEIGQ 255 (322)
T ss_dssp TTCEEECTTSCCCCCTTCCCCGGGCCHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHHTTBTTSSSCCCCCCCTTHHHHCS
T ss_pred CcccccccccCccccccCccCccccCHhhcccccccCcCCCccchhHHHHHHHHHHHhCCCCCCCCcchhccchhhhhcc
Confidence 99987654443333445679999999999876 3566789999999999999999999976433211 11111110
Q ss_pred hcCCc-cchhhcccccCchhhhhHHHHHHHHHHHHHHHhccccCcCCCCCHHHHHHHHHHhHHh
Q 002021 901 WLPIS-TMEVVDANLLSQEDIHFVAKEQCVSFVFNLAMECTMEFPKQRINAKEIVTKLLKIRDS 963 (979)
Q Consensus 901 ~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~eil~~L~~~~~~ 963 (979)
..... ..+...................++.++.+++.+||+.||++|||+.|+++.|+++.+.
T Consensus 256 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~l~~~ 319 (322)
T 3soc_A 256 HPSLEDMQEVVVHKKKRPVLRDYWQKHAGMAMLCETIEECWDHDAEARLSAGCVGERITQMQRL 319 (322)
T ss_dssp SCCHHHHHHHHTTSCCCCCCCGGGGSSHHHHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred CCchhhhhhhhhcccCCCCccccccccchHHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHH
Confidence 00000 0011111111111111122335667799999999999999999999999999999864
No 54
>2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A
Probab=100.00 E-value=1.8e-41 Score=382.20 Aligned_cols=262 Identities=27% Similarity=0.442 Sum_probs=214.7
Q ss_pred hCCCCCCceeeeecceEEEEEEc--------CCCcEEEEEEeccccc-cchhcHHHHHHHHHhc-CCCCeeeEEEeeccC
Q 002021 681 TDGFSENNLIGRGGFGSVYKASL--------GDGMEVAVKVFTSQCG-RAFKSFDVECEIMKSI-RHRNLIKVISSCSNE 750 (979)
Q Consensus 681 ~~~~~~~~~lG~G~~g~Vy~~~~--------~~~~~vAvK~~~~~~~-~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~ 750 (979)
.++|+..+.||+|+||.||+|+. .++..||||+++.... ...+.+.+|+++++.+ +||||+++++++.++
T Consensus 80 ~~~~~~~~~LG~G~fg~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~~~ 159 (370)
T 2psq_A 80 RDKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQD 159 (370)
T ss_dssp GGGEEEEEEESCCSSSEEEEEEEETCSTTCTTCEEEEEEEECCTTCBHHHHHHHHHHHHHHHHSCCCTTBCCEEEEECSS
T ss_pred HHHCEeeeEEeeCCCeeEEEEEEecccCcCcCcceeEEEEEecCCcCHHHHHHHHHHHHHHHHhcCCCCEeeEEEEEccC
Confidence 36788889999999999999964 2456899999975532 3456788999999999 899999999999999
Q ss_pred CeeEEEEEecCCCccceeeccCC---------------CCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCEEe
Q 002021 751 EFKALVLEYMPHGSLEKYLYSSN---------------CILDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLL 815 (979)
Q Consensus 751 ~~~~lv~E~~~~g~L~~~l~~~~---------------~~l~~~~~~~i~~~ia~~L~~LH~~~~~~i~H~Dik~~NIll 815 (979)
+..++||||+++|+|.+++.... ..+++.+++.++.||+.||+||| +++|+||||||+||++
T Consensus 160 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH---~~~ivHrDlkp~NIll 236 (370)
T 2psq_A 160 GPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLA---SQKCIHRDLAARNVLV 236 (370)
T ss_dssp SSCEEEEECCTTCBHHHHHHHTCCC-----------CCCCCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCCGGGEEE
T ss_pred CCEEEEEEcCCCCCHHHHHHhhCCccccccccccccccccCCHHHHHHHHHHHHHHHHHHH---hCCeeccccchhhEEE
Confidence 99999999999999999987643 35789999999999999999999 9999999999999999
Q ss_pred CCCCcEEEEeeccccccCCCCCcceecccccCCCCCCccccCCCCCCCchhHHHHHHHHHHHHc-CCCCCcccccCcchH
Q 002021 816 DDNMVAHLSDFSIAKMLTGEDQSMIQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFT-GKKPTDEIFNGEMTL 894 (979)
Q Consensus 816 ~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~t-g~~P~~~~~~~~~~~ 894 (979)
+.++.+||+|||+++...............+|+.|+|||++.+..++.++|||||||++|||++ |+.||......+ .
T Consensus 237 ~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~ellt~g~~p~~~~~~~~--~ 314 (370)
T 2psq_A 237 TENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEE--L 314 (370)
T ss_dssp CTTCCEEECCCSSCEETTCCCTTCTTTTTTSCGGGCCHHHHHTCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGGG--H
T ss_pred CCCCCEEEccccCCcccCcccceecccCCCcccceECHhHhcCCCCCcHHHHHHHHHHHHHHHcCCCCCCCCCCHHH--H
Confidence 9999999999999987654433333344567889999999998899999999999999999999 999987532211 1
Q ss_pred hHhhhhhcCCccchhhcccccCchhhhhHHHHHHHHHHHHHHHhccccCcCCCCCHHHHHHHHHHhHHhhc
Q 002021 895 KHWVNDWLPISTMEVVDANLLSQEDIHFVAKEQCVSFVFNLAMECTMEFPKQRINAKEIVTKLLKIRDSLL 965 (979)
Q Consensus 895 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~eil~~L~~~~~~~~ 965 (979)
...+.... ....+..++.++.+++.+||+.||++||++.|++++|+++.....
T Consensus 315 ~~~~~~~~------------------~~~~~~~~~~~l~~li~~~l~~dP~~Rpt~~ell~~L~~il~~~~ 367 (370)
T 2psq_A 315 FKLLKEGH------------------RMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRILTLTT 367 (370)
T ss_dssp HHHHHTTC------------------CCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHHC
T ss_pred HHHHhcCC------------------CCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHHhc
Confidence 11111000 001123456679999999999999999999999999999987543
No 55
>2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A*
Probab=100.00 E-value=5.3e-40 Score=361.41 Aligned_cols=281 Identities=30% Similarity=0.485 Sum_probs=226.6
Q ss_pred cccccHHHHHHhhCCCCCC------ceeeeecceEEEEEEcCCCcEEEEEEecccc----ccchhcHHHHHHHHHhcCCC
Q 002021 669 RRMFSYLELCRATDGFSEN------NLIGRGGFGSVYKASLGDGMEVAVKVFTSQC----GRAFKSFDVECEIMKSIRHR 738 (979)
Q Consensus 669 ~~~~~~~~~~~~~~~~~~~------~~lG~G~~g~Vy~~~~~~~~~vAvK~~~~~~----~~~~~~~~~E~~~l~~l~h~ 738 (979)
...|++.++..++++|... +.||+|+||.||+|.. +++.||||++.... ....+.+.+|+++++.++||
T Consensus 12 ~~~~~~~~l~~~~~~f~~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~ 90 (307)
T 2nru_A 12 FHSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYV-NNTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHE 90 (307)
T ss_dssp CEECCHHHHHHHTTTTCCSBTTTTCCEEEECSSEEEEEEES-SSCEEEEEEECCCTTSCTTTHHHHHHHHHHHHHHCCCT
T ss_pred CCcccHHHHHHHHcccccccccccCCccccCCCeEEEEEEE-CCceEEEEEEecccCcchHHHHHHHHHHHHHHHhcCCC
Confidence 4668999999999999877 8999999999999987 68899999986532 23356788999999999999
Q ss_pred CeeeEEEeeccCCeeEEEEEecCCCccceeeccC--CCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCEEeC
Q 002021 739 NLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSS--NCILDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLD 816 (979)
Q Consensus 739 niv~l~~~~~~~~~~~lv~E~~~~g~L~~~l~~~--~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~i~H~Dik~~NIll~ 816 (979)
||+++++++.+.+..++||||+++++|.+++... ...+++..++.++.|++.||+||| +++|+||||||+||+++
T Consensus 91 ~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lH---~~~i~H~dlkp~Nili~ 167 (307)
T 2nru_A 91 NLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGINFLH---ENHHIHRDIKSANILLD 167 (307)
T ss_dssp TBCCEEEEECSSSSCEEEEECCTTCBHHHHHHTGGGCCCCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCCGGGEEEC
T ss_pred CeEEEEEEEecCCceEEEEEecCCCcHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHh---cCCeecCCCCHHHEEEc
Confidence 9999999999999999999999999999998643 346899999999999999999999 99999999999999999
Q ss_pred CCCcEEEEeeccccccCCCCCcceecccccCCCCCCccccCCCCCCCchhHHHHHHHHHHHHcCCCCCcccccCcchHhH
Q 002021 817 DNMVAHLSDFSIAKMLTGEDQSMIQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFTGKKPTDEIFNGEMTLKH 896 (979)
Q Consensus 817 ~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~tg~~P~~~~~~~~~~~~~ 896 (979)
+++.+||+|||++................||+.|+|||.+.+ .++.++||||+|+++|||++|+.||........ ...
T Consensus 168 ~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~-~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~-~~~ 245 (307)
T 2nru_A 168 EAFTAKISDFGLARASEKFAQTVMTSRIVGTTAYMAPEALRG-EITPKSDIYSFGVVLLEIITGLPAVDEHREPQL-LLD 245 (307)
T ss_dssp TTCCEEECCCTTCEECCSCSSCEECSSCCSCGGGCCHHHHTT-EECTHHHHHHHHHHHHHHHHCCCSBCTTBSSSB-TTH
T ss_pred CCCcEEEeecccccccccccccccccccCCCcCcCChHHhcC-CCCccchhHHHHHHHHHHHHCCCCcccCcchHH-HHH
Confidence 999999999999987654333333345678999999998764 589999999999999999999999976443322 112
Q ss_pred hhhhhcC--CccchhhcccccCchhhhhHHHHHHHHHHHHHHHhccccCcCCCCCHHHHHHHHHHhHH
Q 002021 897 WVNDWLP--ISTMEVVDANLLSQEDIHFVAKEQCVSFVFNLAMECTMEFPKQRINAKEIVTKLLKIRD 962 (979)
Q Consensus 897 ~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~eil~~L~~~~~ 962 (979)
+...... ....+..+..... .+..++..+.+++.+||+.||.+|||+.|++++|+++..
T Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~l~~li~~cl~~~p~~Rps~~~l~~~L~~l~~ 306 (307)
T 2nru_A 246 IKEEIEDEEKTIEDYIDKKMND-------ADSTSVEAMYSVASQCLHEKKNKRPDIKKVQQLLQEMTA 306 (307)
T ss_dssp HHHHHHTTSCCHHHHSCSSCSC-------CCHHHHHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHC-
T ss_pred HHHHhhhhhhhhhhhccccccc-------cchHHHHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHhc
Confidence 2111111 1111222221111 123456779999999999999999999999999999864
No 56
>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A*
Probab=100.00 E-value=7.9e-42 Score=386.64 Aligned_cols=261 Identities=29% Similarity=0.431 Sum_probs=214.5
Q ss_pred hCCCCCCceeeeecceEEEEEEcC-CCcEEEEEEeccccc-cchhcHHHHHHHHHhcCCCCeeeEEEeeccCCeeEEEEE
Q 002021 681 TDGFSENNLIGRGGFGSVYKASLG-DGMEVAVKVFTSQCG-RAFKSFDVECEIMKSIRHRNLIKVISSCSNEEFKALVLE 758 (979)
Q Consensus 681 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vAvK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~E 758 (979)
.++|...+.||+|+||.||+|... +++.||||+++.... ...+.+.+|++++++++||||+++++++.+++..++|||
T Consensus 113 ~~~~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e 192 (377)
T 3cbl_A 113 HEDLVLGEQIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQPIYIVME 192 (377)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEECCTTSCHHHHTTTTHHHHHHTTCCCTTBCCEEEEECSSSSCEEEEE
T ss_pred hHHeEEeeEeccCCCCeEEEEEEecCCeEEEEEEccccCCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEecCCCcEEEEE
Confidence 467888899999999999999664 789999999875432 334678899999999999999999999999999999999
Q ss_pred ecCCCccceeeccCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCEEeCCCCcEEEEeeccccccCCCCCc
Q 002021 759 YMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFSIAKMLTGEDQS 838 (979)
Q Consensus 759 ~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~i~H~Dik~~NIll~~~~~~kl~Dfg~~~~~~~~~~~ 838 (979)
|+++|+|.+++...+..+++.+++.++.|+++||+||| +++|+||||||+||++++++.+||+|||+++........
T Consensus 193 ~~~~g~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~LH---~~~ivHrDlkp~Nil~~~~~~~kl~DfG~s~~~~~~~~~ 269 (377)
T 3cbl_A 193 LVQGGDFLTFLRTEGARLRVKTLLQMVGDAAAGMEYLE---SKCCIHRDLAARNCLVTEKNVLKISDFGMSREEADGVYA 269 (377)
T ss_dssp CCTTCBHHHHHHHHGGGCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECTTCCEEECCGGGCEECTTSEEE
T ss_pred cCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH---HCCcCCcccCHHHEEEcCCCcEEECcCCCceecCCCcee
Confidence 99999999999876667999999999999999999999 999999999999999999999999999999865322211
Q ss_pred ceecccccCCCCCCccccCCCCCCCchhHHHHHHHHHHHHc-CCCCCcccccCcchHhHhhhhhcCCccchhhcccccCc
Q 002021 839 MIQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFT-GKKPTDEIFNGEMTLKHWVNDWLPISTMEVVDANLLSQ 917 (979)
Q Consensus 839 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~t-g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 917 (979)
.......+++.|+|||.+.++.++.++|||||||++|||+| |+.||...... .....+...
T Consensus 270 ~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~el~t~g~~p~~~~~~~--~~~~~~~~~---------------- 331 (377)
T 3cbl_A 270 ASGGLRQVPVKWTAPEALNYGRYSSESDVWSFGILLWETFSLGASPYPNLSNQ--QTREFVEKG---------------- 331 (377)
T ss_dssp CCSSCCEEEGGGSCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCSSTTSCHH--HHHHHHHTT----------------
T ss_pred ecCCCCCCCcCcCCHhHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHH--HHHHHHHcC----------------
Confidence 11122345778999999988889999999999999999999 99998753221 111111100
Q ss_pred hhhhhHHHHHHHHHHHHHHHhccccCcCCCCCHHHHHHHHHHhHHhh
Q 002021 918 EDIHFVAKEQCVSFVFNLAMECTMEFPKQRINAKEIVTKLLKIRDSL 964 (979)
Q Consensus 918 ~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~eil~~L~~~~~~~ 964 (979)
.+.+.+..++.++.+++.+||+.||++|||+.|+++.|+++.+..
T Consensus 332 --~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~~L~~i~~~~ 376 (377)
T 3cbl_A 332 --GRLPCPELCPDAVFRLMEQCWAYEPGQRPSFSTIYQELQSIRKRH 376 (377)
T ss_dssp --CCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHC
T ss_pred --CCCCCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHHHHhhc
Confidence 011122346677999999999999999999999999999998653
No 57
>3bz5_A Internalin-J, INLJ; leucine rich repeat (LRR), cysteine ladder, asparagine ladder, virulence factor, solenoid, cell WALL; 2.70A {Listeria monocytogenes}
Probab=100.00 E-value=7.9e-40 Score=378.43 Aligned_cols=360 Identities=19% Similarity=0.167 Sum_probs=207.4
Q ss_pred cCCCCCcCCCCCCeeeccCCcccccCCccccccCcccEEecccccccccCCccccCCCCCcEEEccCCccCchhhhhhhc
Q 002021 87 TIPSQLGNLSSLQSLNLSFNRLFGSIPSAIFTTYTLKYVCLRGNQLSGTFPSFISNKSSLQHLDLSSNALSGEIRANICR 166 (979)
Q Consensus 87 ~~~~~l~~l~~L~~L~L~~n~~~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~ 166 (979)
..+..++++++|++|||++|++++ +| .++.+++|++|+|++|++++. | ++.+++|++|+|++|.+++
T Consensus 33 ~~~~~~~~l~~L~~L~Ls~n~l~~-~~-~l~~l~~L~~L~Ls~n~l~~~-~--~~~l~~L~~L~Ls~N~l~~-------- 99 (457)
T 3bz5_A 33 TDTISEEQLATLTSLDCHNSSITD-MT-GIEKLTGLTKLICTSNNITTL-D--LSQNTNLTYLACDSNKLTN-------- 99 (457)
T ss_dssp TSEEEHHHHTTCCEEECCSSCCCC-CT-TGGGCTTCSEEECCSSCCSCC-C--CTTCTTCSEEECCSSCCSC--------
T ss_pred ccccChhHcCCCCEEEccCCCccc-Ch-hhcccCCCCEEEccCCcCCeE-c--cccCCCCCEEECcCCCCce--------
Confidence 334456777888888888888775 35 577777788888888877764 3 7777778888888777764
Q ss_pred cCCcccCCCCccceeecccccccccccccccCCCCCCceecCCCeeeecCCccccccCccceeeccCCCCcCCCcccccC
Q 002021 167 EIPREFGNLPELELMSLAANNLQGKIPLKIGNLRNLEKLDIGDNKLVGIAPIAIFNVSTLKILGLQDNSLSGCLSSIGYA 246 (979)
Q Consensus 167 ~ip~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~ 246 (979)
+| ++++++|++|++++|++++ +| ++.+++|++|++++|+++++ .+.++++|+.|++++|+..+.. .+.
T Consensus 100 -~~--~~~l~~L~~L~L~~N~l~~-l~--~~~l~~L~~L~l~~N~l~~l---~l~~l~~L~~L~l~~n~~~~~~---~~~ 167 (457)
T 3bz5_A 100 -LD--VTPLTKLTYLNCDTNKLTK-LD--VSQNPLLTYLNCARNTLTEI---DVSHNTQLTELDCHLNKKITKL---DVT 167 (457)
T ss_dssp -CC--CTTCTTCCEEECCSSCCSC-CC--CTTCTTCCEEECTTSCCSCC---CCTTCTTCCEEECTTCSCCCCC---CCT
T ss_pred -ee--cCCCCcCCEEECCCCcCCe-ec--CCCCCcCCEEECCCCcccee---ccccCCcCCEEECCCCCccccc---ccc
Confidence 33 6777777777777777775 33 67777777777777777764 2556666666666666433222 244
Q ss_pred CCCCcCEEEccCCccccccCcccccCCCCcEEeccccccccccCccccccccccceeccccccccccchhhhhhcccCCC
Q 002021 247 RLPNLEILSLWGNNFSGTIPRFIFNASKLSILDLEGNSFSGFIPNTFGNLRNLSWLVLSDNYLTSSTQELSFLSSLSNCK 326 (979)
Q Consensus 247 ~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~l~~l~ 326 (979)
.+++|++|++++|++++ +| +..+++|++|++++|++++. .++.+++|++|++++|++++++ +..++
T Consensus 168 ~l~~L~~L~ls~n~l~~-l~--l~~l~~L~~L~l~~N~l~~~---~l~~l~~L~~L~Ls~N~l~~ip--------~~~l~ 233 (457)
T 3bz5_A 168 PQTQLTTLDCSFNKITE-LD--VSQNKLLNRLNCDTNNITKL---DLNQNIQLTFLDCSSNKLTEID--------VTPLT 233 (457)
T ss_dssp TCTTCCEEECCSSCCCC-CC--CTTCTTCCEEECCSSCCSCC---CCTTCTTCSEEECCSSCCSCCC--------CTTCT
T ss_pred cCCcCCEEECCCCccce-ec--cccCCCCCEEECcCCcCCee---ccccCCCCCEEECcCCcccccC--------ccccC
Confidence 55555666666555554 23 44555555555555555543 2444444555555544444422 22333
Q ss_pred CccEEEccCCCCcccCCccccccccccccEEEccCccccCCCCccccCCCcccEEEecCCCCCchhHHhhhcCCCCcEEE
Q 002021 327 FLKYFDLSYNPLYRILPRTTVGNLSHSLEEFKMSNCNISGGIPEEISNLTNLRTIYLGGNKLNGSILITLSKLQKLQDLG 406 (979)
Q Consensus 327 ~L~~L~Ls~N~l~~~~~~~~~~~l~~~L~~L~L~~n~i~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~ 406 (979)
+ |+.|++++|++++.. ++.+++|+.|++++|+ |+.|+
T Consensus 234 ~--------------------------L~~L~l~~N~l~~~~---~~~l~~L~~L~l~~n~--------------L~~L~ 270 (457)
T 3bz5_A 234 Q--------------------------LTYFDCSVNPLTELD---VSTLSKLTTLHCIQTD--------------LLEID 270 (457)
T ss_dssp T--------------------------CSEEECCSSCCSCCC---CTTCTTCCEEECTTCC--------------CSCCC
T ss_pred C--------------------------CCEEEeeCCcCCCcC---HHHCCCCCEEeccCCC--------------CCEEE
Confidence 3 444444444444332 3345566666665543 34556
Q ss_pred ecCcccCCCccccccCCCCCceEecCCCcccccCCccccCCCcCceEecCCCccccccccccCcCCCcEEEeccccccCC
Q 002021 407 LKDNKLEGSIPYDICNLAELYRLDLDGNKLSGSIPACFSNLTSLRIVSLGSNELTSIPLTFWNLKDILNLNFSSNFLTGS 486 (979)
Q Consensus 407 L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~lp~~~~~l~~L~~L~ls~N~l~~~ 486 (979)
+++|.+.+.+| ++.+++|+.|++++|...+.+|. ..++|+.|++++|
T Consensus 271 l~~n~~~~~~~--~~~l~~L~~L~Ls~n~~l~~l~~---~~~~L~~L~l~~~---------------------------- 317 (457)
T 3bz5_A 271 LTHNTQLIYFQ--AEGCRKIKELDVTHNTQLYLLDC---QAAGITELDLSQN---------------------------- 317 (457)
T ss_dssp CTTCTTCCEEE--CTTCTTCCCCCCTTCTTCCEEEC---TTCCCSCCCCTTC----------------------------
T ss_pred CCCCccCCccc--ccccccCCEEECCCCcccceecc---CCCcceEechhhc----------------------------
Confidence 66666555554 34556666666666665554442 2233333333322
Q ss_pred CccccccccccceEeccCCccCcccchhhcCCcccceeecCCccccCCCCCcccccccccccccccccccccCCccccCc
Q 002021 487 LPLEIGSLKVLVGIDLSRNNFSGVIPTEIGGLKNLEYLFLGYNRLQGSIPNSFGDLISLKFLNLSNNNLSGVIPASLEKL 566 (979)
Q Consensus 487 ~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l 566 (979)
++|+.|++++|++++. + ++.+++|+.|++++|+|++ ++.|..|++++|+++|. ..+
T Consensus 318 --------~~L~~L~L~~N~l~~l-~--l~~l~~L~~L~l~~N~l~~--------l~~L~~L~l~~n~l~g~-----~~~ 373 (457)
T 3bz5_A 318 --------PKLVYLYLNNTELTEL-D--VSHNTKLKSLSCVNAHIQD--------FSSVGKIPALNNNFEAE-----GQT 373 (457)
T ss_dssp --------TTCCEEECTTCCCSCC-C--CTTCTTCSEEECCSSCCCB--------CTTGGGSSGGGTSEEEE-----EEE
T ss_pred --------ccCCEEECCCCccccc-c--cccCCcCcEEECCCCCCCC--------ccccccccccCCcEEec-----cee
Confidence 3455555555555543 1 5555566666666666553 23455556666666654 234
Q ss_pred cccCeEeccCCcccccCCC
Q 002021 567 SYLEDLNLSFNQLEGKIPR 585 (979)
Q Consensus 567 ~~L~~L~L~~N~l~~~~p~ 585 (979)
..|..+++++|+++|.+|.
T Consensus 374 ~~l~~l~l~~N~l~g~ip~ 392 (457)
T 3bz5_A 374 ITMPKETLTNNSLTIAVSP 392 (457)
T ss_dssp EECCCBCCBTTBEEEECCT
T ss_pred eecCccccccCcEEEEcCh
Confidence 4556666666666666664
No 58
>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A*
Probab=100.00 E-value=2.5e-41 Score=371.51 Aligned_cols=263 Identities=27% Similarity=0.387 Sum_probs=204.7
Q ss_pred hhCCCCCCceeeeecceEEEEEEcCCCcEEEEEEecccc--ccchhcHHHHHHHHHhcCCCCeeeEEEeeccCCeeEEEE
Q 002021 680 ATDGFSENNLIGRGGFGSVYKASLGDGMEVAVKVFTSQC--GRAFKSFDVECEIMKSIRHRNLIKVISSCSNEEFKALVL 757 (979)
Q Consensus 680 ~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~vAvK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 757 (979)
..++|+..+.||+|+||.||+|+. +|+.||||++.... ....+.+.+|++++++++||||+++++++.+.+..++||
T Consensus 35 ~~~~y~i~~~lG~G~~g~V~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~ 113 (309)
T 3p86_A 35 PWCDLNIKEKIGAGSFGTVHRAEW-HGSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMGAVTQPPNLSIVT 113 (309)
T ss_dssp CGGGEEEEEEEEECSSEEEEEEEE-TTEEEEEEEECCCCCSHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSTTCCEEEE
T ss_pred ChhHceeeeEeecCCCeEEEEEEE-CCCcEEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCceEEEE
Confidence 446788899999999999999977 68899999986543 223457889999999999999999999999999999999
Q ss_pred EecCCCccceeeccCC--CCCCHHHHHHHHHHHHHHHHHHhcCCCCC--eEecCCCCCCEEeCCCCcEEEEeeccccccC
Q 002021 758 EYMPHGSLEKYLYSSN--CILDIFQRLNIMIDVASALEYLHFGYSAP--VIHCDLKPSNVLLDDNMVAHLSDFSIAKMLT 833 (979)
Q Consensus 758 E~~~~g~L~~~l~~~~--~~l~~~~~~~i~~~ia~~L~~LH~~~~~~--i~H~Dik~~NIll~~~~~~kl~Dfg~~~~~~ 833 (979)
||+++|+|.+++.... ..+++..++.++.|++.||+||| +++ |+||||||+||+++.++.+||+|||+++...
T Consensus 114 e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~qi~~aL~~LH---~~~~~ivH~Dikp~NIll~~~~~~kL~Dfg~a~~~~ 190 (309)
T 3p86_A 114 EYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLH---NRNPPIVHRNLKSPNLLVDKKYTVKVCDFGLSRLKA 190 (309)
T ss_dssp ECCTTCBHHHHHHSTTHHHHSCHHHHHHHHHHHHHHHHHHH---TSSSCCCCTTCCGGGEEECTTCCEEECCCC------
T ss_pred ecCCCCcHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHH---cCCCCEECCCCChhhEEEeCCCcEEECCCCCCcccc
Confidence 9999999999997753 24899999999999999999999 888 9999999999999999999999999997643
Q ss_pred CCCCcceecccccCCCCCCccccCCCCCCCchhHHHHHHHHHHHHcCCCCCcccccCcchHhHhhhhhcCCccchhhccc
Q 002021 834 GEDQSMIQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFTGKKPTDEIFNGEMTLKHWVNDWLPISTMEVVDAN 913 (979)
Q Consensus 834 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 913 (979)
.. ........||+.|+|||.+.+..+++++||||+|+++|||++|+.||......+ ....+.....
T Consensus 191 ~~--~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~Pf~~~~~~~--~~~~~~~~~~---------- 256 (309)
T 3p86_A 191 ST--FLSSKSAAGTPEWMAPEVLRDEPSNEKSDVYSFGVILWELATLQQPWGNLNPAQ--VVAAVGFKCK---------- 256 (309)
T ss_dssp -------------CCTTSCHHHHTTCCCCTTHHHHHHHHHHHHHHHCCCTTTTSCHHH--HHHHHHHSCC----------
T ss_pred cc--ccccccCCCCccccChhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHH--HHHHHHhcCC----------
Confidence 22 122344678999999999999999999999999999999999999997532211 1111100000
Q ss_pred ccCchhhhhHHHHHHHHHHHHHHHhccccCcCCCCCHHHHHHHHHHhHHhhccC
Q 002021 914 LLSQEDIHFVAKEQCVSFVFNLAMECTMEFPKQRINAKEIVTKLLKIRDSLLRN 967 (979)
Q Consensus 914 ~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~eil~~L~~~~~~~~~~ 967 (979)
....+..+++++.+++.+||+.||++|||+.|+++.|+++.++..+.
T Consensus 257 -------~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~~ll~~L~~~~~~~~p~ 303 (309)
T 3p86_A 257 -------RLEIPRNLNPQVAAIIEGCWTNEPWKRPSFATIMDLLRPLIKSAVPP 303 (309)
T ss_dssp -------CCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHC-----
T ss_pred -------CCCCCccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHhCCCC
Confidence 00112245567899999999999999999999999999998876554
No 59
>1csn_A Casein kinase-1; phosphotransferase; HET: ATP; 2.00A {Schizosaccharomyces pombe} SCOP: d.144.1.7 PDB: 1eh4_A* 2csn_A*
Probab=100.00 E-value=2.2e-40 Score=362.79 Aligned_cols=275 Identities=14% Similarity=0.107 Sum_probs=227.5
Q ss_pred hCCCCCCceeeeecceEEEEEE-cCCCcEEEEEEeccccccchhcHHHHHHHHHhc-CCCCeeeEEEeeccCCeeEEEEE
Q 002021 681 TDGFSENNLIGRGGFGSVYKAS-LGDGMEVAVKVFTSQCGRAFKSFDVECEIMKSI-RHRNLIKVISSCSNEEFKALVLE 758 (979)
Q Consensus 681 ~~~~~~~~~lG~G~~g~Vy~~~-~~~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lv~E 758 (979)
.++|+..+.||+|+||.||+|. ..+++.||||++... ...+.+.+|+++++.+ +|++++++++++.+....++|||
T Consensus 9 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~--~~~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~~~lv~e 86 (298)
T 1csn_A 9 GVHYKVGRRIGEGSFGVIFEGTNLLNNQQVAIKFEPRR--SDAPQLRDEYRTYKLLAGCTGIPNVYYFGQEGLHNVLVID 86 (298)
T ss_dssp TTTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEECC--TTSCCHHHHHHHHHHTTTCTTCCCEEEEEEETTEEEEEEE
T ss_pred ccceEEEEEEeecCCEEEEEEEECCCCcEEEEEEeccC--CccHHHHHHHHHHHHHhcCCCCCeEEeecCCCceeEEEEE
Confidence 3678899999999999999996 468999999998644 3446788999999999 79999999999999999999999
Q ss_pred ecCCCccceeeccCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCEEeCCCCc-----EEEEeeccccccC
Q 002021 759 YMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMV-----AHLSDFSIAKMLT 833 (979)
Q Consensus 759 ~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~i~H~Dik~~NIll~~~~~-----~kl~Dfg~~~~~~ 833 (979)
|+ +++|.+++...+..+++.+++.++.|++.||+||| +++|+||||||+||+++.++. +||+|||++....
T Consensus 87 ~~-~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH---~~~ivH~Dlkp~NIl~~~~~~~~~~~~kl~Dfg~~~~~~ 162 (298)
T 1csn_A 87 LL-GPSLEDLLDLCGRKFSVKTVAMAAKQMLARVQSIH---EKSLVYRDIKPDNFLIGRPNSKNANMIYVVDFGMVKFYR 162 (298)
T ss_dssp CC-CCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHH---TTTEECCCCCGGGEEECCSSSTTTTCEEECCCTTCEESB
T ss_pred ec-CCCHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHH---hCCEecCCCCHHHEEeccCCCCCCCeEEEEECccccccc
Confidence 99 99999999877667999999999999999999999 999999999999999987776 9999999998765
Q ss_pred CCCCc-----ceecccccCCCCCCccccCCCCCCCchhHHHHHHHHHHHHcCCCCCcccccCcchH--hHhhhhhcCCcc
Q 002021 834 GEDQS-----MIQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFTGKKPTDEIFNGEMTL--KHWVNDWLPIST 906 (979)
Q Consensus 834 ~~~~~-----~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~tg~~P~~~~~~~~~~~--~~~~~~~~~~~~ 906 (979)
..... .......||+.|+|||.+.+..+++++||||+|+++|||++|+.||.......... ........
T Consensus 163 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~---- 238 (298)
T 1csn_A 163 DPVTKQHIPYREKKNLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGLKAATNKQKYERIGEKKQ---- 238 (298)
T ss_dssp CTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCSCCHHHHHHHHHHHHH----
T ss_pred cccccccccccCccCCCCCcccCCchhhcCCCCChHHHHHHHHHHHHHHHcCCCCcchhhccccHHHHHHHHhhcc----
Confidence 43221 12345579999999999999899999999999999999999999997643221110 00000000
Q ss_pred chhhcccccCchhhhhHHHHHHHHHHHHHHHhccccCcCCCCCHHHHHHHHHHhHHhhccCCCCcceecc
Q 002021 907 MEVVDANLLSQEDIHFVAKEQCVSFVFNLAMECTMEFPKQRINAKEIVTKLLKIRDSLLRNVGGRCVRQS 976 (979)
Q Consensus 907 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~eil~~L~~~~~~~~~~~~~~~~~~~ 976 (979)
..........++.++.+++.+||+.||++||+++|+++.|+++.++.......+.+|+.
T Consensus 239 -----------~~~~~~~~~~~~~~l~~li~~~l~~dp~~RP~~~~l~~~l~~~~~~~~~~~~~~~dw~~ 297 (298)
T 1csn_A 239 -----------STPLRELCAGFPEEFYKYMHYARNLAFDATPDYDYLQGLFSKVLERLNTTEDENFDWNL 297 (298)
T ss_dssp -----------HSCHHHHTTTSCHHHHHHHHHHHHCCTTCCCCHHHHHHHHHHHHHHTTCCSCSCCGGGC
T ss_pred -----------CccHHHHHhhCcHHHHHHHHHHhcCCcccCCCHHHHHHHHHHHHHhcCCCCCCccccCC
Confidence 00001111245678999999999999999999999999999999999999999999975
No 60
>3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens}
Probab=100.00 E-value=3.7e-41 Score=373.15 Aligned_cols=260 Identities=27% Similarity=0.420 Sum_probs=211.5
Q ss_pred CCCCCCceeeeecceEEEEEEcC----CCcEEEEEEecccc-ccchhcHHHHHHHHHhcCCCCeeeEEEeeccCCeeEEE
Q 002021 682 DGFSENNLIGRGGFGSVYKASLG----DGMEVAVKVFTSQC-GRAFKSFDVECEIMKSIRHRNLIKVISSCSNEEFKALV 756 (979)
Q Consensus 682 ~~~~~~~~lG~G~~g~Vy~~~~~----~~~~vAvK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 756 (979)
++|+..+.||+|+||.||+|... .+..||||++.... ....+.+.+|+++++.++||||+++++++.+++..++|
T Consensus 49 ~~y~i~~~lG~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv 128 (325)
T 3kul_A 49 SRIHIEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIMGQFDHPNIIRLEGVVTRGRLAMIV 128 (325)
T ss_dssp GGEEEEEEEEETTTEEEEEEEECCTTSCCEEEEEEEECTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECGGGCCEEE
T ss_pred hHeEEeeEEEeCCCcEEEEEEEecCCCCCceEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCccEEE
Confidence 45777899999999999999653 45569999997543 33456789999999999999999999999999999999
Q ss_pred EEecCCCccceeeccCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCEEeCCCCcEEEEeeccccccCCCC
Q 002021 757 LEYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFSIAKMLTGED 836 (979)
Q Consensus 757 ~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~i~H~Dik~~NIll~~~~~~kl~Dfg~~~~~~~~~ 836 (979)
|||+++|+|.+++......+++.+++.++.|++.||+||| +++|+||||||+||+++.++.+||+|||+++......
T Consensus 129 ~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~LH---~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~ 205 (325)
T 3kul_A 129 TEYMENGSLDTFLRTHDGQFTIMQLVGMLRGVGAGMRYLS---DLGYVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDP 205 (325)
T ss_dssp EECCTTCBHHHHHHTTTTCSCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECTTCCEEECCCSSCEECC---
T ss_pred eeCCCCCcHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHH---HCCeeCCCCCcceEEECCCCCEEECCCCcccccccCc
Confidence 9999999999999877678999999999999999999999 9999999999999999999999999999998765332
Q ss_pred C-cceecccccCCCCCCccccCCCCCCCchhHHHHHHHHHHHHc-CCCCCcccccCcchHhHhhhhhcCCccchhhcccc
Q 002021 837 Q-SMIQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFT-GKKPTDEIFNGEMTLKHWVNDWLPISTMEVVDANL 914 (979)
Q Consensus 837 ~-~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~t-g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 914 (979)
. ........+|+.|+|||++.+..++.++||||+|+++|||++ |+.||......+ ....+...
T Consensus 206 ~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~~--~~~~~~~~------------- 270 (325)
T 3kul_A 206 DAAYTTTGGKIPIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLAYGERPYWNMTNRD--VISSVEEG------------- 270 (325)
T ss_dssp -CCEECC---CCGGGSCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTSCHHH--HHHHHHTT-------------
T ss_pred cceeeccCCCCcccccCHhHhcCCCCCcHHHHHHHHHHHHHHHcCCCCCcccCCHHH--HHHHHHcC-------------
Confidence 2 222233456788999999988899999999999999999999 999986532211 11111000
Q ss_pred cCchhhhhHHHHHHHHHHHHHHHhccccCcCCCCCHHHHHHHHHHhHHhh
Q 002021 915 LSQEDIHFVAKEQCVSFVFNLAMECTMEFPKQRINAKEIVTKLLKIRDSL 964 (979)
Q Consensus 915 ~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~eil~~L~~~~~~~ 964 (979)
.....+..++..+.+++.+||..||++|||+.|+++.|+++.+..
T Consensus 271 -----~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~eil~~L~~l~~~~ 315 (325)
T 3kul_A 271 -----YRLPAPMGCPHALHQLMLDCWHKDRAQRPRFSQIVSVLDALIRSP 315 (325)
T ss_dssp -----CCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHSC
T ss_pred -----CCCCCCCCcCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHhCc
Confidence 001112345677999999999999999999999999999998653
No 61
>3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vhk_A* 3vid_A* 3hng_A*
Probab=100.00 E-value=6.6e-41 Score=377.40 Aligned_cols=274 Identities=24% Similarity=0.375 Sum_probs=220.6
Q ss_pred cccccHHHHHHhhCCCCCCceeeeecceEEEEEE------cCCCcEEEEEEeccccc-cchhcHHHHHHHHHhc-CCCCe
Q 002021 669 RRMFSYLELCRATDGFSENNLIGRGGFGSVYKAS------LGDGMEVAVKVFTSQCG-RAFKSFDVECEIMKSI-RHRNL 740 (979)
Q Consensus 669 ~~~~~~~~~~~~~~~~~~~~~lG~G~~g~Vy~~~------~~~~~~vAvK~~~~~~~-~~~~~~~~E~~~l~~l-~h~ni 740 (979)
...+....+....++|+..+.||+|+||.||+|. ..+++.||||++..... ...+.+.+|+++++++ +||||
T Consensus 9 ~~~~~~~~~~~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpni 88 (359)
T 3vhe_A 9 RLPYDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNV 88 (359)
T ss_dssp GSCCCHHHHBCCGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTB
T ss_pred hCCCCcccccccccceeeceeecCCCCceEEEEEeccccccccceEEEEEEecCcCCHHHHHHHHHHHHHHHhhcCCcce
Confidence 3345556666777899999999999999999995 34568999999975432 3346789999999999 79999
Q ss_pred eeEEEeeccCC-eeEEEEEecCCCccceeeccCCC---------------------------------------------
Q 002021 741 IKVISSCSNEE-FKALVLEYMPHGSLEKYLYSSNC--------------------------------------------- 774 (979)
Q Consensus 741 v~l~~~~~~~~-~~~lv~E~~~~g~L~~~l~~~~~--------------------------------------------- 774 (979)
+++++++.+.+ ..++||||+++|+|.+++.....
T Consensus 89 v~~~~~~~~~~~~~~iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 168 (359)
T 3vhe_A 89 VNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTKGARFRQGKDYVGAIPVDLKRRLDSITSSQSSASSGFV 168 (359)
T ss_dssp CCEEEEECSTTSCCEEEEECCTTEEHHHHHHTTTTSBCSCC---------------------------------------
T ss_pred eeeeeeeecCCCceEEEEEecCCCcHHHHHHhccccccccccccchhhcccccccccchhhhccccccCccccccccccc
Confidence 99999987754 48999999999999999876432
Q ss_pred --------------------CCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCEEeCCCCcEEEEeeccccccCC
Q 002021 775 --------------------ILDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFSIAKMLTG 834 (979)
Q Consensus 775 --------------------~l~~~~~~~i~~~ia~~L~~LH~~~~~~i~H~Dik~~NIll~~~~~~kl~Dfg~~~~~~~ 834 (979)
.+++..++.++.|++.||+||| +++|+||||||+||+++.++.+||+|||+++....
T Consensus 169 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ql~~aL~~LH---~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~ 245 (359)
T 3vhe_A 169 EEKSLSDVEEEEAPEDLYKDFLTLEHLICYSFQVAKGMEFLA---SRKCIHRDLAARNILLSEKNVVKICDFGLARDIYK 245 (359)
T ss_dssp ---------------CTTTTCBCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEECGGGCEEECCCGGGSCTTS
T ss_pred cccccchhhhcccccchhccccCHHHHHHHHHHHHHHHHHHH---HCCcccCCCChhhEEEcCCCcEEEEeccceeeecc
Confidence 2899999999999999999999 99999999999999999999999999999987654
Q ss_pred CCCcceecccccCCCCCCccccCCCCCCCchhHHHHHHHHHHHHc-CCCCCcccccCcchHhHhhhhhcCCccchhhccc
Q 002021 835 EDQSMIQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFT-GKKPTDEIFNGEMTLKHWVNDWLPISTMEVVDAN 913 (979)
Q Consensus 835 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~t-g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 913 (979)
...........+|+.|+|||++.+..++.++||||+||++|||+| |+.||......+...... .....
T Consensus 246 ~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~~~~~-~~~~~---------- 314 (359)
T 3vhe_A 246 DPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRL-KEGTR---------- 314 (359)
T ss_dssp CTTCEEC--CEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCCSHHHHHHH-HHTCC----------
T ss_pred cccchhccccCCCceeEChhhhcCCCCCchhhhhhHHHHHHHHHhcCCCCCCccchhHHHHHHH-HcCCC----------
Confidence 444444456678999999999988899999999999999999998 999997543222111111 11000
Q ss_pred ccCchhhhhHHHHHHHHHHHHHHHhccccCcCCCCCHHHHHHHHHHhHHhh
Q 002021 914 LLSQEDIHFVAKEQCVSFVFNLAMECTMEFPKQRINAKEIVTKLLKIRDSL 964 (979)
Q Consensus 914 ~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~eil~~L~~~~~~~ 964 (979)
...+..+++++.+++.+||+.||++|||+.|++++|+++..+-
T Consensus 315 --------~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~~~~~ 357 (359)
T 3vhe_A 315 --------MRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQAN 357 (359)
T ss_dssp --------CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHH
T ss_pred --------CCCCCCCCHHHHHHHHHHccCChhhCCCHHHHHHHHHHHHHHh
Confidence 0011234567899999999999999999999999999998753
No 62
>4hcu_A Tyrosine-protein kinase ITK/TSK; transferase-transferase inhibitor complex; HET: 13L; 1.43A {Homo sapiens} PDB: 4hct_A* 4hcv_A* 3t9t_A* 1sm2_A* 1snu_A* 1snx_A 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*
Probab=100.00 E-value=3.7e-41 Score=363.04 Aligned_cols=257 Identities=27% Similarity=0.428 Sum_probs=213.9
Q ss_pred CCCCCCceeeeecceEEEEEEcCCCcEEEEEEeccccccchhcHHHHHHHHHhcCCCCeeeEEEeeccCCeeEEEEEecC
Q 002021 682 DGFSENNLIGRGGFGSVYKASLGDGMEVAVKVFTSQCGRAFKSFDVECEIMKSIRHRNLIKVISSCSNEEFKALVLEYMP 761 (979)
Q Consensus 682 ~~~~~~~~lG~G~~g~Vy~~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~E~~~ 761 (979)
++|+..+.||+|+||.||+|...+++.||||++.... ...+.+.+|++++++++||||+++++++.+++..++||||++
T Consensus 10 ~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~ 88 (269)
T 4hcu_A 10 SELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGA-MSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFEFME 88 (269)
T ss_dssp GGEEEEEEEEECSSCEEEEEEETTTEEEEEEEECTTS-BCHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEEEEECCT
T ss_pred hhceeeheecCCCccEEEEEEecCCCeEEEEEecccc-cCHHHHHHHHHHHHhCCCCCEeeEEEEEecCCceEEEEEeCC
Confidence 5688889999999999999988788999999997543 334678999999999999999999999999999999999999
Q ss_pred CCccceeeccCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCEEeCCCCcEEEEeeccccccCCCCCccee
Q 002021 762 HGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFSIAKMLTGEDQSMIQ 841 (979)
Q Consensus 762 ~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~i~H~Dik~~NIll~~~~~~kl~Dfg~~~~~~~~~~~~~~ 841 (979)
+++|.+++......+++..++.++.|++.|++||| +++|+||||||+||+++.++.+||+|||++....... ....
T Consensus 89 ~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH---~~~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~-~~~~ 164 (269)
T 4hcu_A 89 HGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLE---EACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQ-YTSS 164 (269)
T ss_dssp TCBHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEECGGGCEEECCTTGGGGBCCHH-HHST
T ss_pred CCcHHHHHHhcCcccCHHHHHHHHHHHHHHHHHHH---hCCeecCCcchheEEEcCCCCEEeccccccccccccc-cccc
Confidence 99999999887778999999999999999999999 9999999999999999999999999999998654221 1222
Q ss_pred cccccCCCCCCccccCCCCCCCchhHHHHHHHHHHHHc-CCCCCcccccCcchHhHhhhhhcCCccchhhcccccCchhh
Q 002021 842 TQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFT-GKKPTDEIFNGEMTLKHWVNDWLPISTMEVVDANLLSQEDI 920 (979)
Q Consensus 842 ~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~t-g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 920 (979)
....+|+.|+|||.+.+..+++++||||+|+++|||++ |+.||......+ ....+....
T Consensus 165 ~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~~g~~p~~~~~~~~--~~~~~~~~~------------------ 224 (269)
T 4hcu_A 165 TGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSE--VVEDISTGF------------------ 224 (269)
T ss_dssp TSTTCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHH--HHHHHHTTC------------------
T ss_pred cCcccccccCCHHHhcCCCCCchhhhHHHHHHHHHHhcCCCCCCCCCCHHH--HHHHHhcCc------------------
Confidence 34456788999999988899999999999999999999 999987532211 111100000
Q ss_pred hhHHHHHHHHHHHHHHHhccccCcCCCCCHHHHHHHHHHhHHh
Q 002021 921 HFVAKEQCVSFVFNLAMECTMEFPKQRINAKEIVTKLLKIRDS 963 (979)
Q Consensus 921 ~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~eil~~L~~~~~~ 963 (979)
....+..++..+.+++.+||+.||++|||+.|++++|+++.++
T Consensus 225 ~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~ll~~l~~l~~~ 267 (269)
T 4hcu_A 225 RLYKPRLASTHVYQIMNHCWRERPEDRPAFSRLLRQLAEIAES 267 (269)
T ss_dssp CCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHC
T ss_pred cCCCCCcCCHHHHHHHHHHccCCcccCcCHHHHHHHHHHHHHc
Confidence 0001122346689999999999999999999999999999864
No 63
>3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 4e4m_A* 4f08_A* 4f09_A* 3q32_A* 3rvg_A* 4hge_A* 3tjc_A* 3tjd_A* 4bbe_A* 4bbf_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* ...
Probab=100.00 E-value=1.5e-41 Score=371.54 Aligned_cols=274 Identities=25% Similarity=0.422 Sum_probs=211.9
Q ss_pred CCCCCCceeeeecceEEEEEEc-----CCCcEEEEEEeccccccchhcHHHHHHHHHhcCCCCeeeEEEeecc--CCeeE
Q 002021 682 DGFSENNLIGRGGFGSVYKASL-----GDGMEVAVKVFTSQCGRAFKSFDVECEIMKSIRHRNLIKVISSCSN--EEFKA 754 (979)
Q Consensus 682 ~~~~~~~~lG~G~~g~Vy~~~~-----~~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~--~~~~~ 754 (979)
++|+..+.||+|+||.||+|++ .+++.||||++........+.+.+|++++++++||||+++++++.. ....+
T Consensus 10 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 89 (295)
T 3ugc_A 10 RHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLK 89 (295)
T ss_dssp GGEEEEEEEEECSSEEEEEEEECTTCSSCCEEEEEEEESCCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECHHHHTSCE
T ss_pred HHhhhhheeeccCCEEEEEEEEecccCCCCcEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCCCceE
Confidence 5688899999999999999973 3689999999986655556788999999999999999999999854 45689
Q ss_pred EEEEecCCCccceeeccCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCEEeCCCCcEEEEeeccccccCC
Q 002021 755 LVLEYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFSIAKMLTG 834 (979)
Q Consensus 755 lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~i~H~Dik~~NIll~~~~~~kl~Dfg~~~~~~~ 834 (979)
+||||+++|+|.+++......+++.+++.++.|++.||+||| +++|+||||||+||+++.++.+||+|||++.....
T Consensus 90 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH---~~~ivH~Dikp~Nil~~~~~~~kl~Dfg~~~~~~~ 166 (295)
T 3ugc_A 90 LIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLG---TKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQ 166 (295)
T ss_dssp EEEECCTTCBHHHHHHHCGGGCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEEEETTEEEECCCCSCC----
T ss_pred EEEEeCCCCCHHHHHHhcccccCHHHHHHHHHHHHHHHHHHh---cCCcccCCCCHhhEEEcCCCeEEEccCcccccccC
Confidence 999999999999999887767999999999999999999999 99999999999999999999999999999987643
Q ss_pred CCCc-ceecccccCCCCCCccccCCCCCCCchhHHHHHHHHHHHHcCCCCCcccccCcchHhHhhhhhcCCccc--hhhc
Q 002021 835 EDQS-MIQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFTGKKPTDEIFNGEMTLKHWVNDWLPISTM--EVVD 911 (979)
Q Consensus 835 ~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~--~~~~ 911 (979)
.... .......++..|+|||.+.+..+++++||||+|+++|||+||..||...... .............. ...+
T Consensus 167 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~ 243 (295)
T 3ugc_A 167 DKEFFKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAE---FMRMIGNDKQGQMIVFHLIE 243 (295)
T ss_dssp ---------CTTCGGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTTCTTCSHHHH---HHHHHCTTCCTHHHHHHHHH
T ss_pred CcceeeeccCCCCccceeCcHHhcCCCCChHHHHHHHHHHHHHHHhcccccCCChHH---HHhhhcCccccchhHHHHHH
Confidence 3221 2223345677899999999889999999999999999999999998653211 11110000000000 0000
Q ss_pred ccccCchhhhhHHHHHHHHHHHHHHHhccccCcCCCCCHHHHHHHHHHhHHhh
Q 002021 912 ANLLSQEDIHFVAKEQCVSFVFNLAMECTMEFPKQRINAKEIVTKLLKIRDSL 964 (979)
Q Consensus 912 ~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~eil~~L~~~~~~~ 964 (979)
.. ....+.+.+..+++++.+++.+||+.||++|||+.|+++.|+++.+.+
T Consensus 244 -~~--~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~el~~~L~~l~~~l 293 (295)
T 3ugc_A 244 -LL--KNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRDNM 293 (295)
T ss_dssp -HH--HTTCCCCCCTTCCHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHHHC-
T ss_pred -HH--hccCcCCCCcCcCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHHhc
Confidence 00 001111223456778999999999999999999999999999998765
No 64
>3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} SCOP: d.144.1.7 PDB: 3sxr_A*
Probab=100.00 E-value=6.2e-41 Score=361.09 Aligned_cols=259 Identities=25% Similarity=0.399 Sum_probs=213.8
Q ss_pred hCCCCCCceeeeecceEEEEEEcCCCcEEEEEEeccccccchhcHHHHHHHHHhcCCCCeeeEEEeeccCCeeEEEEEec
Q 002021 681 TDGFSENNLIGRGGFGSVYKASLGDGMEVAVKVFTSQCGRAFKSFDVECEIMKSIRHRNLIKVISSCSNEEFKALVLEYM 760 (979)
Q Consensus 681 ~~~~~~~~~lG~G~~g~Vy~~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~E~~ 760 (979)
.++|+..+.||+|+||.||+|+..++..||||++.... ...+.+.+|++++++++||||+++++++.+++..++||||+
T Consensus 7 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 85 (268)
T 3sxs_A 7 REEITLLKELGSGQFGVVKLGKWKGQYDVAVKMIKEGS-MSEDEFFQEAQTMMKLSHPKLVKFYGVCSKEYPIYIVTEYI 85 (268)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECBTT-BCHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSEEEEEECC
T ss_pred hhheeeeeeeccCCCceEEEEEecCceeEEEEEeccCC-CcHHHHHHHHHHHHhCCCCCEeeEEEEEccCCceEEEEEcc
Confidence 35788899999999999999988888899999997543 33467899999999999999999999999999999999999
Q ss_pred CCCccceeeccCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCEEeCCCCcEEEEeeccccccCCCCCcce
Q 002021 761 PHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFSIAKMLTGEDQSMI 840 (979)
Q Consensus 761 ~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~i~H~Dik~~NIll~~~~~~kl~Dfg~~~~~~~~~~~~~ 840 (979)
++++|.+++......+++.+++.++.|++.|++||| +++|+||||||+||+++.++.+||+|||.+....... ...
T Consensus 86 ~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH---~~~i~H~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~~-~~~ 161 (268)
T 3sxs_A 86 SNGCLLNYLRSHGKGLEPSQLLEMCYDVCEGMAFLE---SHQFIHRDLAARNCLVDRDLCVKVSDFGMTRYVLDDQ-YVS 161 (268)
T ss_dssp TTCBHHHHHHHHGGGCCHHHHHHHHHHHHHHHHHHH---HTTEEESSCSGGGEEECTTCCEEECCTTCEEECCTTC-EEE
T ss_pred CCCcHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHH---HCCeecCCcCcceEEECCCCCEEEccCccceecchhh-hhc
Confidence 999999999877667999999999999999999999 9999999999999999999999999999998764332 222
Q ss_pred ecccccCCCCCCccccCCCCCCCchhHHHHHHHHHHHHc-CCCCCcccccCcchHhHhhhhhcCCccchhhcccccCchh
Q 002021 841 QTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFT-GKKPTDEIFNGEMTLKHWVNDWLPISTMEVVDANLLSQED 919 (979)
Q Consensus 841 ~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~t-g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 919 (979)
.....+|+.|+|||.+.+..+++++||||+|+++|||++ |+.||......+.. ........
T Consensus 162 ~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~-~~~~~~~~----------------- 223 (268)
T 3sxs_A 162 SVGTKFPVKWSAPEVFHYFKYSSKSDVWAFGILMWEVFSLGKMPYDLYTNSEVV-LKVSQGHR----------------- 223 (268)
T ss_dssp CCSCCCCGGGCCHHHHHHSEEETTHHHHHHHHHHHHHHTTTCCTTTTSCHHHHH-HHHHTTCC-----------------
T ss_pred ccCCCcCcccCCHHHHhccCCchhhhhHHHHHHHHHHHcCCCCCccccChHHHH-HHHHcCCC-----------------
Confidence 334456778999999988889999999999999999999 99998653222111 11000000
Q ss_pred hhhHHHHHHHHHHHHHHHhccccCcCCCCCHHHHHHHHHHhHHhh
Q 002021 920 IHFVAKEQCVSFVFNLAMECTMEFPKQRINAKEIVTKLLKIRDSL 964 (979)
Q Consensus 920 ~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~eil~~L~~~~~~~ 964 (979)
...+..+++.+.+++.+||+.||++|||+.|++++|+++.+..
T Consensus 224 --~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~L~~l~~~~ 266 (268)
T 3sxs_A 224 --LYRPHLASDTIYQIMYSCWHELPEKRPTFQQLLSSIEPLREKD 266 (268)
T ss_dssp --CCCCTTSCHHHHHHHHHTTCSSGGGSCCHHHHHHHHGGGCC--
T ss_pred --CCCCCcChHHHHHHHHHHcCCChhhCcCHHHHHHHHHHhhhcc
Confidence 0011223456899999999999999999999999999987653
No 65
>3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A*
Probab=100.00 E-value=2.1e-40 Score=366.57 Aligned_cols=254 Identities=23% Similarity=0.315 Sum_probs=207.9
Q ss_pred hCCCCCCceeeeecceEEEEEEc-CCCcEEEEEEecccc-ccchhcHHHHHHHHHhcCCCCeeeEEEeeccCCeeEEEEE
Q 002021 681 TDGFSENNLIGRGGFGSVYKASL-GDGMEVAVKVFTSQC-GRAFKSFDVECEIMKSIRHRNLIKVISSCSNEEFKALVLE 758 (979)
Q Consensus 681 ~~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vAvK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~E 758 (979)
.++|+..+.||+|+||.||+|.. .+++.||||++.... ....+.+.+|+.+++.++||||+++++++.+++..++|||
T Consensus 6 ~~~y~i~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~e 85 (323)
T 3tki_A 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLE 85 (323)
T ss_dssp TTCEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECC-------CHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEE
T ss_pred hhhceeeeEEecCCCEEEEEEEECCCCcEEEEEEEEcccccchHHHHHHHHHHHHhCCCCCCCeEEEEEecCCeEEEEEE
Confidence 36789999999999999999954 579999999986443 2334678999999999999999999999999999999999
Q ss_pred ecCCCccceeeccCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCEEeCCCCcEEEEeeccccccCCCCCc
Q 002021 759 YMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFSIAKMLTGEDQS 838 (979)
Q Consensus 759 ~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~i~H~Dik~~NIll~~~~~~kl~Dfg~~~~~~~~~~~ 838 (979)
|+++|+|.+++.... .+++.+++.++.|++.||+||| +++|+||||||+||+++.++.+||+|||++..+......
T Consensus 86 ~~~~~~L~~~l~~~~-~~~~~~~~~i~~qi~~aL~~LH---~~givH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~ 161 (323)
T 3tki_A 86 YCSGGELFDRIEPDI-GMPEPDAQRFFHQLMAGVVYLH---GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRE 161 (323)
T ss_dssp CCTTEEGGGGSBTTT-BCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECTTCCEEECCCTTCEECEETTEE
T ss_pred cCCCCcHHHHHhhcC-CCCHHHHHHHHHHHHHHHHHHH---HCCccccccchHHEEEeCCCCEEEEEeeccceeccCCcc
Confidence 999999999997653 5899999999999999999999 999999999999999999999999999999876433333
Q ss_pred ceecccccCCCCCCccccCCCCC-CCchhHHHHHHHHHHHHcCCCCCcccccCcchHhHhhhhhcCCccchhhcccccCc
Q 002021 839 MIQTQTLATIGYMAPEYGREGRV-SANGDVYSFGIMLMETFTGKKPTDEIFNGEMTLKHWVNDWLPISTMEVVDANLLSQ 917 (979)
Q Consensus 839 ~~~~~~~gt~~y~aPE~~~~~~~-~~~~DvwslG~il~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 917 (979)
.......||+.|+|||++.+..+ +.++||||+||++|||++|+.||.........+..+......
T Consensus 162 ~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~~~~~~~~~-------------- 227 (323)
T 3tki_A 162 RLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTY-------------- 227 (323)
T ss_dssp CCBCSCCSCGGGSCHHHHHCSSBCHHHHHHHHHHHHHHHHHHSSCSCSSSCTTSHHHHHHHTTCTT--------------
T ss_pred cccCCCccCcCccCcHHhccCCCCCCcccHHHHHHHHHHHHhCCCCCCCCchHHHHHHHHhccccc--------------
Confidence 33345679999999999877665 778999999999999999999997644433333332221110
Q ss_pred hhhhhHHHHHHHHHHHHHHHhccccCcCCCCCHHHHHHH
Q 002021 918 EDIHFVAKEQCVSFVFNLAMECTMEFPKQRINAKEIVTK 956 (979)
Q Consensus 918 ~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~eil~~ 956 (979)
......++..+.+++.+|++.||++|||+.|++++
T Consensus 228 ----~~~~~~~~~~~~~li~~~L~~dP~~R~t~~eil~h 262 (323)
T 3tki_A 228 ----LNPWKKIDSAPLALLHKILVENPSARITIPDIKKD 262 (323)
T ss_dssp ----STTGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTTC
T ss_pred ----CCccccCCHHHHHHHHHHccCChhhCcCHHHHhhC
Confidence 01112345678899999999999999999999876
No 66
>2izr_A Casein kinase I isoform gamma-3; serine/threonine-protein kinase, transferase, ATP- binding, phosphorylation, nucleotide-binding; HET: BRK; 1.3A {Homo sapiens} PDB: 2izs_A* 2izt_A* 2izu_A* 2chl_A* 2c47_A* 2cmw_A*
Probab=100.00 E-value=2.5e-40 Score=367.77 Aligned_cols=275 Identities=20% Similarity=0.172 Sum_probs=222.4
Q ss_pred hCCCCCCceeeeecceEEEEEE-cCCCcEEEEEEeccccccchhcHHHHHHHHHhc-CCCCeeeEEEeeccCCeeEEEEE
Q 002021 681 TDGFSENNLIGRGGFGSVYKAS-LGDGMEVAVKVFTSQCGRAFKSFDVECEIMKSI-RHRNLIKVISSCSNEEFKALVLE 758 (979)
Q Consensus 681 ~~~~~~~~~lG~G~~g~Vy~~~-~~~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lv~E 758 (979)
.++|+..+.||+|+||.||+|. ..+|+.||||++... ...+.+.+|+++++.+ +||||+++++++.+++..++|||
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~--~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~~~~lv~e 85 (330)
T 2izr_A 8 GPNFRVGKKIGCGNFGELRLGKNLYTNEYVAIKLEPMK--SRAPQLHLEYRFYKQLGSGDGIPQVYYFGPCGKYNAMVLE 85 (330)
T ss_dssp TTTEEEEEECCC-CTTSEEEEEETTTTEEEEEEEEETT--CSSCCHHHHHHHHHHHCSCTTSCCEEEEEEETTEEEEEEE
T ss_pred cCCeEEEEEeeccCCceEEEEEECCCCcEEEEEEeccc--cchHHHHHHHHHHHHhhCCCCCCEEEEEEecCCccEEEEE
Confidence 3678899999999999999995 468999999998654 2346789999999999 99999999999999999999999
Q ss_pred ecCCCccceeeccCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCEEeCCCCc-----EEEEeeccccccC
Q 002021 759 YMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMV-----AHLSDFSIAKMLT 833 (979)
Q Consensus 759 ~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~i~H~Dik~~NIll~~~~~-----~kl~Dfg~~~~~~ 833 (979)
|+ +++|.+++......+++.+++.++.|++.||+||| +++|+||||||+||+++.++. +||+|||+++.+.
T Consensus 86 ~~-~~~L~~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH---~~~iiHrDlkp~Nill~~~~~~~~~~~kl~DFg~a~~~~ 161 (330)
T 2izr_A 86 LL-GPSLEDLFDLCDRTFSLKTVLMIAIQLISRMEYVH---SKNLIYRDVKPENFLIGRPGNKTQQVIHIIDFALAKEYI 161 (330)
T ss_dssp CC-CCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEECCGGGTCTTSEEECCCTTCEESB
T ss_pred eC-CCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHH---hCCeeccCCCHHHeeeccCCCCCCceEEEEEcccceeee
Confidence 99 89999999876668999999999999999999999 899999999999999998887 9999999998764
Q ss_pred CCCCcc-----eecccccCCCCCCccccCCCCCCCchhHHHHHHHHHHHHcCCCCCcccccCcchHhHhhhhhcCCccch
Q 002021 834 GEDQSM-----IQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFTGKKPTDEIFNGEMTLKHWVNDWLPISTME 908 (979)
Q Consensus 834 ~~~~~~-----~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~ 908 (979)
...... ......||+.|+|||++.+..++.++|||||||++|||++|+.||........ .......
T Consensus 162 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~Pf~~~~~~~~--~~~~~~i------- 232 (330)
T 2izr_A 162 DPETKKHIPYREHKSLTGTARYMSINTHLGKEQSRRDDLEALGHMFMYFLRGSLPWQGLKADTL--KERYQKI------- 232 (330)
T ss_dssp CTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCSSH--HHHHHHH-------
T ss_pred cCCCCccccccccCCcCCCccccChHHHcCCCCCchhHHHHHHHHHHHHhcCCCCccccccccH--HHHHHHH-------
Confidence 332211 12456799999999999999999999999999999999999999976432211 1000000
Q ss_pred hhcccccCchhhhhHHHHHHHHHHHHHHHhccccCcCCCCCHHHHHHHHHHhHHhhccCCCCcceec
Q 002021 909 VVDANLLSQEDIHFVAKEQCVSFVFNLAMECTMEFPKQRINAKEIVTKLLKIRDSLLRNVGGRCVRQ 975 (979)
Q Consensus 909 ~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~eil~~L~~~~~~~~~~~~~~~~~~ 975 (979)
........ .......++ ++.+++.+||+.||.+||+++++++.|+++.+.......+..+|.
T Consensus 233 -~~~~~~~~---~~~~~~~~p-~~~~li~~~l~~~p~~RP~~~~l~~~l~~~~~~~~~~~~~~~dw~ 294 (330)
T 2izr_A 233 -GDTKRATP---IEVLCENFP-EMATYLRYVRRLDFFEKPDYDYLRKLFTDLFDRKGYMFDYEYDWI 294 (330)
T ss_dssp -HHHHHHSC---HHHHTTTCH-HHHHHHHHHHHCCTTCCCCHHHHHHHHHHHHHHTTCCCSCCCTTT
T ss_pred -HhhhccCC---HHHHhccCh-HHHHHHHHHHhCCCCCCCCHHHHHHHHHHHHHHcCCCCCCCccCC
Confidence 00000000 000111244 799999999999999999999999999999998877777777775
No 67
>2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A*
Probab=100.00 E-value=5.1e-40 Score=363.30 Aligned_cols=262 Identities=23% Similarity=0.270 Sum_probs=214.1
Q ss_pred ccccHHHHHHhhCC----------CCCCceeeeecceEEEEEEc-CCCcEEEEEEeccccccchhcHHHHHHHHHhcCCC
Q 002021 670 RMFSYLELCRATDG----------FSENNLIGRGGFGSVYKASL-GDGMEVAVKVFTSQCGRAFKSFDVECEIMKSIRHR 738 (979)
Q Consensus 670 ~~~~~~~~~~~~~~----------~~~~~~lG~G~~g~Vy~~~~-~~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~h~ 738 (979)
..++++++..++.. |+..+.||+|+||.||+|.. .+|+.||||++........+.+.+|+.+++.++||
T Consensus 23 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~G~~g~V~~a~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~ 102 (321)
T 2c30_A 23 GVVTHEQFKAALRMVVDQGDPRLLLDSYVKIGEGSTGIVCLAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHF 102 (321)
T ss_dssp --CCHHHHHHHHHTTSCSSCHHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCSHHHHHHHHHHHTTCCCT
T ss_pred CcCcHHHHHHHHhhccCCCCchhhhhccEEeccCCCeEEEEEEECCCCcEEEEEEEeccchhHHHHHHHHHHHHHhCCCC
Confidence 45777777776654 56667999999999999965 47999999999766555667789999999999999
Q ss_pred CeeeEEEeeccCCeeEEEEEecCCCccceeeccCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCEEeCCC
Q 002021 739 NLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDN 818 (979)
Q Consensus 739 niv~l~~~~~~~~~~~lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~i~H~Dik~~NIll~~~ 818 (979)
||+++++++...+..++||||+++++|.+++... .+++.++..++.|++.||+||| +++|+||||||+||+++.+
T Consensus 103 niv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~--~l~~~~~~~i~~qi~~~L~~LH---~~~ivH~Dlkp~NIll~~~ 177 (321)
T 2c30_A 103 NVVEMYKSYLVGEELWVLMEFLQGGALTDIVSQV--RLNEEQIATVCEAVLQALAYLH---AQGVIHRDIKSDSILLTLD 177 (321)
T ss_dssp TBCCEEEEEEETTEEEEEECCCCSCBHHHHHTTC--CCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECTT
T ss_pred CcceEEEEEEECCEEEEEEecCCCCCHHHHHHhc--CCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCHHHEEECCC
Confidence 9999999999999999999999999999988654 5899999999999999999999 8999999999999999999
Q ss_pred CcEEEEeeccccccCCCCCcceecccccCCCCCCccccCCCCCCCchhHHHHHHHHHHHHcCCCCCcccccCcchHhHhh
Q 002021 819 MVAHLSDFSIAKMLTGEDQSMIQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFTGKKPTDEIFNGEMTLKHWV 898 (979)
Q Consensus 819 ~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~tg~~P~~~~~~~~~~~~~~~ 898 (979)
+.+||+|||++........ ......||+.|+|||++.+..++.++||||+|+++|||++|+.||...... .....+
T Consensus 178 ~~~kl~Dfg~~~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~pf~~~~~~--~~~~~~ 253 (321)
T 2c30_A 178 GRVKLSDFGFCAQISKDVP--KRKSLVGTPYWMAPEVISRSLYATEVDIWSLGIMVIEMVDGEPPYFSDSPV--QAMKRL 253 (321)
T ss_dssp CCEEECCCTTCEECCSSSC--CBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHH--HHHHHH
T ss_pred CcEEEeeeeeeeecccCcc--ccccccCCccccCHhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH--HHHHHH
Confidence 9999999999987643222 224457999999999999999999999999999999999999999653211 111111
Q ss_pred hhhcCCccchhhcccccCchhhhhHHHHHHHHHHHHHHHhccccCcCCCCCHHHHHHH
Q 002021 899 NDWLPISTMEVVDANLLSQEDIHFVAKEQCVSFVFNLAMECTMEFPKQRINAKEIVTK 956 (979)
Q Consensus 899 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~eil~~ 956 (979)
....... ......+++.+.+++.+||+.||++|||+.|+++|
T Consensus 254 ~~~~~~~----------------~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~h 295 (321)
T 2c30_A 254 RDSPPPK----------------LKNSHKVSPVLRDFLERMLVRDPQERATAQELLDH 295 (321)
T ss_dssp HHSSCCC----------------CTTGGGSCHHHHHHHHHHSCSSTTTSCCHHHHHTS
T ss_pred hcCCCCC----------------cCccccCCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 1111000 01112345678999999999999999999999986
No 68
>3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A
Probab=100.00 E-value=6.6e-41 Score=370.63 Aligned_cols=249 Identities=24% Similarity=0.320 Sum_probs=206.0
Q ss_pred hhCCCCCCceeeeecceEEEEEEc-CCCcEEEEEEecccc--ccchhcHHHHHHHHHhcCCCCeeeEEEeeccCCeeEEE
Q 002021 680 ATDGFSENNLIGRGGFGSVYKASL-GDGMEVAVKVFTSQC--GRAFKSFDVECEIMKSIRHRNLIKVISSCSNEEFKALV 756 (979)
Q Consensus 680 ~~~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vAvK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 756 (979)
..++|+..+.||+|+||.||+|.. .+|+.||||++.... ....+.+.+|+++++.++||||+++++++..++..++|
T Consensus 13 ~~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv 92 (328)
T 3fe3_A 13 HIGNYRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLFEVIETEKTLYLI 92 (328)
T ss_dssp EETTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEE
T ss_pred ccCCEEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEhhcCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCEEEEE
Confidence 346799999999999999999954 689999999986542 23346688999999999999999999999999999999
Q ss_pred EEecCCCccceeeccCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCEEeCCCCcEEEEeeccccccCCCC
Q 002021 757 LEYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFSIAKMLTGED 836 (979)
Q Consensus 757 ~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~i~H~Dik~~NIll~~~~~~kl~Dfg~~~~~~~~~ 836 (979)
|||+++|+|.+++...+ .+++.+++.++.|+++|++||| +++|+||||||+||+++.++.+||+|||++.......
T Consensus 93 ~e~~~~~~L~~~l~~~~-~l~~~~~~~~~~qi~~al~~lH---~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~ 168 (328)
T 3fe3_A 93 MEYASGGEVFDYLVAHG-RMKEKEARSKFRQIVSAVQYCH---QKRIVHRDLKAENLLLDADMNIKIADFGFSNEFTVGG 168 (328)
T ss_dssp ECCCTTCBHHHHHHHHC-CCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEECTTSCEEECSTTCCGGGSSSC
T ss_pred EECCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHH---HCCEeccCCCHHHEEEcCCCCEEEeeccCceecCCCC
Confidence 99999999999987653 5899999999999999999999 9999999999999999999999999999998764332
Q ss_pred CcceecccccCCCCCCccccCCCCCC-CchhHHHHHHHHHHHHcCCCCCcccccCcchHhHhhhhhcCCccchhhccccc
Q 002021 837 QSMIQTQTLATIGYMAPEYGREGRVS-ANGDVYSFGIMLMETFTGKKPTDEIFNGEMTLKHWVNDWLPISTMEVVDANLL 915 (979)
Q Consensus 837 ~~~~~~~~~gt~~y~aPE~~~~~~~~-~~~DvwslG~il~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 915 (979)
.....+||+.|+|||++.+..+. +++||||+||++|||++|+.||...... .....+. .. .
T Consensus 169 ---~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~--~~~~~i~-----------~~-~- 230 (328)
T 3fe3_A 169 ---KLDAFCGAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLK--ELRERVL-----------RG-K- 230 (328)
T ss_dssp ---GGGTTSSSGGGCCHHHHHTCCCCSHHHHHHHHHHHHHHHHHSSCSSCCSSHH--HHHHHHH-----------HC-C-
T ss_pred ---ccccccCCcceeCcccccCCCcCCchhhhhhhHHHHHHHHhCCCCCCCCCHH--HHHHHHH-----------hC-C-
Confidence 23456799999999999887764 7999999999999999999999753211 1111000 00 0
Q ss_pred CchhhhhHHHHHHHHHHHHHHHhccccCcCCCCCHHHHHHH
Q 002021 916 SQEDIHFVAKEQCVSFVFNLAMECTMEFPKQRINAKEIVTK 956 (979)
Q Consensus 916 ~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~eil~~ 956 (979)
...+..+++++.+++.+|++.||.+|||++|+++|
T Consensus 231 ------~~~p~~~s~~~~~li~~~L~~dP~~R~t~~eil~h 265 (328)
T 3fe3_A 231 ------YRIPFYMSTDCENLLKRFLVLNPIKRGTLEQIMKD 265 (328)
T ss_dssp ------CCCCTTSCHHHHHHHHHHCCSSTTTSCCHHHHTTC
T ss_pred ------CCCCCCCCHHHHHHHHHHCCCChhHCcCHHHHhcC
Confidence 00112345668899999999999999999999986
No 69
>1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=2.1e-40 Score=365.99 Aligned_cols=253 Identities=20% Similarity=0.280 Sum_probs=209.7
Q ss_pred hCCCCCCceeeeecceEEEEEE-cCCCcEEEEEEeccccccchhcHHHHHHHHHhcCCCCeeeEEEeeccCCeeEEEEEe
Q 002021 681 TDGFSENNLIGRGGFGSVYKAS-LGDGMEVAVKVFTSQCGRAFKSFDVECEIMKSIRHRNLIKVISSCSNEEFKALVLEY 759 (979)
Q Consensus 681 ~~~~~~~~~lG~G~~g~Vy~~~-~~~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~E~ 759 (979)
.++|+..+.||+|+||.||+|. ..+++.||+|++... ....+.+.+|+++++.++||||+++++++.+.+..++||||
T Consensus 4 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~a~K~~~~~-~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~e~ 82 (321)
T 1tki_A 4 YEKYMIAEDLGRGEFGIVHRCVETSSKKTYMAKFVKVK-GTDQVLVKKEISILNIARHRNILHLHESFESMEELVMIFEF 82 (321)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCC-THHHHHHHHHHHHHHHSCCTTBCCEEEEEEETTEEEEEECC
T ss_pred hhceEeeeEEecCCCeEEEEEEECCCCcEEEEEEEecC-cccHHHHHHHHHHHHhCCCCCCCeEeEEEecCCEEEEEEEe
Confidence 4678899999999999999995 457899999998644 23446688999999999999999999999999999999999
Q ss_pred cCCCccceeeccCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCEEeCC--CCcEEEEeeccccccCCCCC
Q 002021 760 MPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDD--NMVAHLSDFSIAKMLTGEDQ 837 (979)
Q Consensus 760 ~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~i~H~Dik~~NIll~~--~~~~kl~Dfg~~~~~~~~~~ 837 (979)
+++|+|.+++......+++.+++.++.|++.|++||| +++|+||||||+||+++. ++.+||+|||++.......
T Consensus 83 ~~g~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH---~~givH~Dlkp~NIl~~~~~~~~~kl~Dfg~a~~~~~~~- 158 (321)
T 1tki_A 83 ISGLDIFERINTSAFELNEREIVSYVHQVCEALQFLH---SHNIGHFDIRPENIIYQTRRSSTIKIIEFGQARQLKPGD- 158 (321)
T ss_dssp CCCCBHHHHHTSSSCCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEESSSSCCCEEECCCTTCEECCTTC-
T ss_pred CCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH---HCCCCcCCCCHHHEEEccCCCCCEEEEECCCCeECCCCC-
Confidence 9999999999877667999999999999999999999 999999999999999997 7899999999998764332
Q ss_pred cceecccccCCCCCCccccCCCCCCCchhHHHHHHHHHHHHcCCCCCcccccCcchHhHhhhhhcCCccchhhcccccCc
Q 002021 838 SMIQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFTGKKPTDEIFNGEMTLKHWVNDWLPISTMEVVDANLLSQ 917 (979)
Q Consensus 838 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 917 (979)
......||+.|+|||++.+..+++++||||+||++|||++|+.||......+ ..........
T Consensus 159 --~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~-~~~~i~~~~~--------------- 220 (321)
T 1tki_A 159 --NFRLLFTAPEYYAPEVHQHDVVSTATDMWSLGTLVYVLLSGINPFLAETNQQ-IIENIMNAEY--------------- 220 (321)
T ss_dssp --EEEEEESCGGGSCHHHHTTCEECHHHHHHHHHHHHHHHHHSSCTTCCSSHHH-HHHHHHHTCC---------------
T ss_pred --ccccccCChhhcCcHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCcCCCHHH-HHHHHHcCCC---------------
Confidence 2344678999999999988889999999999999999999999996532111 1111111000
Q ss_pred hhhhhHHHHHHHHHHHHHHHhccccCcCCCCCHHHHHHHH
Q 002021 918 EDIHFVAKEQCVSFVFNLAMECTMEFPKQRINAKEIVTKL 957 (979)
Q Consensus 918 ~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~eil~~L 957 (979)
.........++.++.+++.+|+..||++|||+.|+++|-
T Consensus 221 -~~~~~~~~~~s~~~~~li~~~L~~dp~~Rpt~~e~l~hp 259 (321)
T 1tki_A 221 -TFDEEAFKEISIEAMDFVDRLLVKERKSRMTASEALQHP 259 (321)
T ss_dssp -CCCHHHHTTSCHHHHHHHHTTSCSSGGGSCCHHHHHHSH
T ss_pred -CCChhhhccCCHHHHHHHHHHcCCChhHCcCHHHHhcCh
Confidence 011122334567799999999999999999999999864
No 70
>3zgw_A Maternal embryonic leucine zipper kinase; transferase; HET: ANP; 2.60A {Homo sapiens}
Probab=100.00 E-value=8.1e-41 Score=371.89 Aligned_cols=251 Identities=25% Similarity=0.366 Sum_probs=198.7
Q ss_pred hhCCCCCCceeeeecceEEEEEE-cCCCcEEEEEEecccc-ccchhcHHHHHHHHHhcCCCCeeeEEEeeccCCeeEEEE
Q 002021 680 ATDGFSENNLIGRGGFGSVYKAS-LGDGMEVAVKVFTSQC-GRAFKSFDVECEIMKSIRHRNLIKVISSCSNEEFKALVL 757 (979)
Q Consensus 680 ~~~~~~~~~~lG~G~~g~Vy~~~-~~~~~~vAvK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 757 (979)
..+.|+..+.||+|+||.||+|. ..+|+.||||++.... ....+.+.+|+++++.++||||+++++++.+.+..++||
T Consensus 8 l~~~y~i~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~Ei~~l~~l~hpnIv~l~~~~~~~~~~~lv~ 87 (347)
T 3zgw_A 8 LLKYYELHETIGTGGFAKVKLACHILTGEMVAIKIMDKNTLGSDLPRIKTEIEALKNLRHQHICQLYHVLETANKIFMVL 87 (347)
T ss_dssp TTTTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEESSCC---CCHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred HhcCeEEEEEEEcCCCeEEEEEEECCCCCEEEEEEEEccccchHHHHHHHHHHHHHhCCCCCEeeEEEEEEeCCEEEEEE
Confidence 45778999999999999999995 5689999999986543 234567889999999999999999999999999999999
Q ss_pred EecCCCccceeeccCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCEEeCCCCcEEEEeeccccccCCCCC
Q 002021 758 EYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFSIAKMLTGEDQ 837 (979)
Q Consensus 758 E~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~i~H~Dik~~NIll~~~~~~kl~Dfg~~~~~~~~~~ 837 (979)
||+++|+|.+++...+ .+++.+++.++.|++.|++||| +++|+||||||+||++++++.+||+|||++.......
T Consensus 88 E~~~gg~L~~~l~~~~-~l~~~~~~~i~~qi~~aL~~LH---~~givHrDlkp~NIll~~~~~~kL~DFG~a~~~~~~~- 162 (347)
T 3zgw_A 88 EYCPGGELFDYIISQD-RLSEEETRVVFRQIVSAVAYVH---SQGYAHRDLKPENLLFDEYHKLKLIDFGLCAKPKGNK- 162 (347)
T ss_dssp ECCTTCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHH---HTTCBCCCCCGGGEEECTTSCEEECCCTTCBC------
T ss_pred eCCCCCCHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHH---HCCeEeCCccHHHEEEcCCCCEEEEeccCcccccCCC-
Confidence 9999999999987654 6899999999999999999999 9999999999999999999999999999987654322
Q ss_pred cceecccccCCCCCCccccCCCCC-CCchhHHHHHHHHHHHHcCCCCCcccccCcchHhHhhhhhcCCccchhhcccccC
Q 002021 838 SMIQTQTLATIGYMAPEYGREGRV-SANGDVYSFGIMLMETFTGKKPTDEIFNGEMTLKHWVNDWLPISTMEVVDANLLS 916 (979)
Q Consensus 838 ~~~~~~~~gt~~y~aPE~~~~~~~-~~~~DvwslG~il~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 916 (979)
........||+.|+|||++.+..+ +.++||||+||++|||++|+.||......+ .........
T Consensus 163 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~Pf~~~~~~~-~~~~i~~~~--------------- 226 (347)
T 3zgw_A 163 DYHLQTCCGSLAYAAPELIQGKSYLGSEADVWSMGILLYVLMCGFLPFDDDNVMA-LYKKIMRGK--------------- 226 (347)
T ss_dssp ---------CGGGCCHHHHTTC---CCHHHHHHHHHHHHHHHHSSCSSCCSSHHH-HHHHHHHTC---------------
T ss_pred CccccccCCccCccCHHHHcCCCCCCcHhHHHHHHHHHHHHHHCCCCCCCCCHHH-HHHHHHcCC---------------
Confidence 222345679999999999987775 899999999999999999999997521111 111110000
Q ss_pred chhhhhHHHHHHHHHHHHHHHhccccCcCCCCCHHHHHHH
Q 002021 917 QEDIHFVAKEQCVSFVFNLAMECTMEFPKQRINAKEIVTK 956 (979)
Q Consensus 917 ~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~eil~~ 956 (979)
...+..+++.+.+++.+||+.||++|||+.|+++|
T Consensus 227 -----~~~p~~~s~~~~~li~~~L~~dP~~Rps~~eil~h 261 (347)
T 3zgw_A 227 -----YDVPKWLSPSSILLLQQMLQVDPKKRISMKNLLNH 261 (347)
T ss_dssp -----CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHTC
T ss_pred -----CCCCCCCCHHHHHHHHHHcccCHhHCcCHHHHhcC
Confidence 00112345668899999999999999999999987
No 71
>3lb7_A RAF proto-oncogene serine/threonine-protein kinas; kinase domain, alternative splicing, ATP-binding, disease MU kinase, metal-binding; 4.00A {Homo sapiens} PDB: 3omv_A*
Probab=100.00 E-value=4.1e-40 Score=361.66 Aligned_cols=263 Identities=26% Similarity=0.417 Sum_probs=206.5
Q ss_pred hCCCCCCceeeeecceEEEEEEcCCCcEEEEEEecccc--ccchhcHHHHHHHHHhcCCCCeeeEEEeeccCCeeEEEEE
Q 002021 681 TDGFSENNLIGRGGFGSVYKASLGDGMEVAVKVFTSQC--GRAFKSFDVECEIMKSIRHRNLIKVISSCSNEEFKALVLE 758 (979)
Q Consensus 681 ~~~~~~~~~lG~G~~g~Vy~~~~~~~~~vAvK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~E 758 (979)
.++|+..+.||+|+||.||+|.... .+|||+++... ....+.+.+|++++++++||||+++++++.. +..++|||
T Consensus 35 ~~~~~~~~~lG~G~~g~Vy~~~~~~--~~avk~~k~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~-~~~~lv~e 111 (307)
T 3lb7_A 35 ASEVMLSTRIGSGSFGTVYKGKWHG--DVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGYMTK-DNLAIVTQ 111 (307)
T ss_dssp TTSCCEEEEEEECSSCEEEEEESSS--EEEEEECCCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECS-SSCEEEEE
T ss_pred ccceEEEeEecCCCCeEEEEEEECC--EEEEEEEecCCCCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEcc-CcEEEEEe
Confidence 4678899999999999999997743 58999886432 2345678899999999999999999998754 55789999
Q ss_pred ecCCCccceeeccCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCEEeCCCCcEEEEeeccccccCCCCCc
Q 002021 759 YMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFSIAKMLTGEDQS 838 (979)
Q Consensus 759 ~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~i~H~Dik~~NIll~~~~~~kl~Dfg~~~~~~~~~~~ 838 (979)
|+++++|.+++......+++.+++.++.|++.||+||| +++|+||||||+||++++++.+||+|||++.........
T Consensus 112 ~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~LH---~~~ivH~Dlkp~NIll~~~~~~kl~DFg~a~~~~~~~~~ 188 (307)
T 3lb7_A 112 WCEGSSLYKHLHVQETKFQMFQLIDIARQTAQGMDYLH---AKNIIHRDMKSNNIFLHEGLTVKIGDFGLATVKSRWSGS 188 (307)
T ss_dssp CCSSCBHHHHHHTSCCCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCSSSEEECTTSCEEECCCCSSCC-------
T ss_pred cCCCCcHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHH---hCCEeeCCCChhhEEEcCCCCEEEccCCCceeccccccc
Confidence 99999999999877778999999999999999999999 899999999999999999999999999999865432333
Q ss_pred ceecccccCCCCCCccccC---CCCCCCchhHHHHHHHHHHHHcCCCCCcccccCcchHhHhhhhhcCCccchhhccccc
Q 002021 839 MIQTQTLATIGYMAPEYGR---EGRVSANGDVYSFGIMLMETFTGKKPTDEIFNGEMTLKHWVNDWLPISTMEVVDANLL 915 (979)
Q Consensus 839 ~~~~~~~gt~~y~aPE~~~---~~~~~~~~DvwslG~il~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 915 (979)
.......||+.|+|||.+. +..++.++|||||||++|||++|+.||......+................
T Consensus 189 ~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~-------- 260 (307)
T 3lb7_A 189 QQVEQPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPYSHINNRDQIIFMVGRGYASPDLS-------- 260 (307)
T ss_dssp -----CCCCTTSCCHHHHHCCSSCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCHHHHHHHHHHTCCCCCST--------
T ss_pred ccccCCCCCcceECcceeeccCCCCCCchhhHHHHHHHHHHHHhCCCCCccCCcHHHHHHHHhcCCCCcchh--------
Confidence 3334567999999999875 56788999999999999999999999975332221111111111100000
Q ss_pred CchhhhhHHHHHHHHHHHHHHHhccccCcCCCCCHHHHHHHHHHhHHhh
Q 002021 916 SQEDIHFVAKEQCVSFVFNLAMECTMEFPKQRINAKEIVTKLLKIRDSL 964 (979)
Q Consensus 916 ~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~eil~~L~~~~~~~ 964 (979)
.....+++.+.+++.+||+.+|++||++.|++++|+.+..++
T Consensus 261 -------~~~~~~~~~l~~li~~~l~~~p~~RPs~~~il~~l~~l~~~~ 302 (307)
T 3lb7_A 261 -------KLYKNCPKAMKRLVADCVKKVKEERPLFPQILSSIELLQHSL 302 (307)
T ss_dssp -------TSCSSSCHHHHHHHHHHSCSSSTTSCCHHHHHHHHHHHHTTC
T ss_pred -------hhhcCCcHHHHHHHHHHhhCChhhCcCHHHHHHHHHHHHhhc
Confidence 011245667999999999999999999999999999998665
No 72
>2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ...
Probab=100.00 E-value=9.2e-41 Score=376.69 Aligned_cols=259 Identities=25% Similarity=0.455 Sum_probs=201.9
Q ss_pred CCCCCCceeeeecceEEEEEEcC----CCcEEEEEEecccc-ccchhcHHHHHHHHHhcCCCCeeeEEEeeccCCeeEEE
Q 002021 682 DGFSENNLIGRGGFGSVYKASLG----DGMEVAVKVFTSQC-GRAFKSFDVECEIMKSIRHRNLIKVISSCSNEEFKALV 756 (979)
Q Consensus 682 ~~~~~~~~lG~G~~g~Vy~~~~~----~~~~vAvK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 756 (979)
++|+..+.||+|+||.||+|+.. ++..||||+++... ....+.+.+|++++++++||||+++++++.+.+..++|
T Consensus 45 ~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv 124 (373)
T 2qol_A 45 TNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIV 124 (373)
T ss_dssp GGCCCCEEEEECSSSEEEEC-CBCTTSCBCCEEEEECCTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSCEEE
T ss_pred hhceeeeEEeeCCCeEEEEEEEecCCCCceeEEEEEecCccCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEeeCCceEEE
Confidence 57889999999999999999653 57789999987543 23456789999999999999999999999999999999
Q ss_pred EEecCCCccceeeccCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCEEeCCCCcEEEEeeccccccCCCC
Q 002021 757 LEYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFSIAKMLTGED 836 (979)
Q Consensus 757 ~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~i~H~Dik~~NIll~~~~~~kl~Dfg~~~~~~~~~ 836 (979)
|||+++|+|.+++......+++.+++.++.|+++||+||| +++|+||||||+||+++.++.+||+|||+++......
T Consensus 125 ~e~~~~~sL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH---~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~ 201 (373)
T 2qol_A 125 TEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLS---DMGYVHRDLAARNILINSNLVCKVSDFGLGRVLEDDP 201 (373)
T ss_dssp EECCTTCBHHHHHHTTTTCSCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEECTTCCEEECCC----------
T ss_pred EeCCCCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHH---HCCeeCCCCCcceEEEcCCCCEEECcCccccccccCC
Confidence 9999999999999887778999999999999999999999 8999999999999999999999999999998764332
Q ss_pred Cc-ceecccccCCCCCCccccCCCCCCCchhHHHHHHHHHHHHc-CCCCCcccccCcchHhHhhhhhcCCccchhhcccc
Q 002021 837 QS-MIQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFT-GKKPTDEIFNGEMTLKHWVNDWLPISTMEVVDANL 914 (979)
Q Consensus 837 ~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~t-g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 914 (979)
.. .......+++.|+|||++.+..++.++||||||+++||+++ |+.||......+ ....+ ....
T Consensus 202 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~SlG~il~ellt~g~~P~~~~~~~~--~~~~i------------~~~~ 267 (373)
T 2qol_A 202 EAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQD--VIKAV------------DEGY 267 (373)
T ss_dssp ------------CTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTC-CTTTTCCHHH--HHHHH------------HTTE
T ss_pred ccceeccCCCcCCCccChhhhccCCcCchhcHHHHHHHHHHHHhCCCCCCCCCCHHH--HHHHH------------HcCC
Confidence 21 11223345778999999998899999999999999999998 999986532111 11111 0000
Q ss_pred cCchhhhhHHHHHHHHHHHHHHHhccccCcCCCCCHHHHHHHHHHhHHh
Q 002021 915 LSQEDIHFVAKEQCVSFVFNLAMECTMEFPKQRINAKEIVTKLLKIRDS 963 (979)
Q Consensus 915 ~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~eil~~L~~~~~~ 963 (979)
+.+.+..++..+.+++.+||+.||++||++.|+++.|+++.+.
T Consensus 268 ------~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~~i~~~L~~~~~~ 310 (373)
T 2qol_A 268 ------RLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKLIRN 310 (373)
T ss_dssp ------ECCCCTTCBHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHC
T ss_pred ------CCCCCccccHHHHHHHHHHhCcChhhCcCHHHHHHHHHHHHhC
Confidence 0111224566799999999999999999999999999999764
No 73
>2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A*
Probab=100.00 E-value=4.9e-40 Score=367.98 Aligned_cols=252 Identities=21% Similarity=0.300 Sum_probs=207.1
Q ss_pred hCCCCCCceeeeecceEEEEEE-cCCCcEEEEEEecccccc------chhcHHHHHHHHHhcCCCCeeeEEEeeccCCee
Q 002021 681 TDGFSENNLIGRGGFGSVYKAS-LGDGMEVAVKVFTSQCGR------AFKSFDVECEIMKSIRHRNLIKVISSCSNEEFK 753 (979)
Q Consensus 681 ~~~~~~~~~lG~G~~g~Vy~~~-~~~~~~vAvK~~~~~~~~------~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~ 753 (979)
.+.|+..+.||+|+||.||+|. ..+|+.||||++...... ..+.+.+|+++++.++||||+++++++.+++..
T Consensus 11 ~~~y~~~~~LG~G~fg~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~ 90 (361)
T 2yab_A 11 EDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVSILRQVLHPNIITLHDVYENRTDV 90 (361)
T ss_dssp GGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEE
T ss_pred hhceEEeeEEeeCcCEEEEEEEECCCCCEEEEEEEEccccccccchhHHHHHHHHHHHHHhCCCcCCCcEEEEEEeCCEE
Confidence 4678899999999999999995 457999999998754321 246788999999999999999999999999999
Q ss_pred EEEEEecCCCccceeeccCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCEEeCCCC----cEEEEeeccc
Q 002021 754 ALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNM----VAHLSDFSIA 829 (979)
Q Consensus 754 ~lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~i~H~Dik~~NIll~~~~----~~kl~Dfg~~ 829 (979)
++||||+++|+|.+++... ..+++..+..++.||+.||+||| +++|+||||||+||+++.++ .+||+|||++
T Consensus 91 ~lv~e~~~gg~L~~~l~~~-~~l~~~~~~~i~~qi~~aL~~LH---~~givHrDlkp~NIll~~~~~~~~~vkl~DFG~a 166 (361)
T 2yab_A 91 VLILELVSGGELFDFLAQK-ESLSEEEATSFIKQILDGVNYLH---TKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLA 166 (361)
T ss_dssp EEEEECCCSCBHHHHHTTC-SCCBHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEESCTTSSSCCEEECCCSSC
T ss_pred EEEEEcCCCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCCHHHEEEeCCCCCccCEEEEecCCc
Confidence 9999999999999998764 36899999999999999999999 99999999999999998776 7999999999
Q ss_pred cccCCCCCcceecccccCCCCCCccccCCCCCCCchhHHHHHHHHHHHHcCCCCCcccccCcchHhHhhhhhcCCccchh
Q 002021 830 KMLTGEDQSMIQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFTGKKPTDEIFNGEMTLKHWVNDWLPISTMEV 909 (979)
Q Consensus 830 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~ 909 (979)
....... ......||+.|+|||++.+..++.++||||+||++|+|++|..||...... ..+......
T Consensus 167 ~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~g~~Pf~~~~~~-~~~~~i~~~--------- 233 (361)
T 2yab_A 167 HEIEDGV---EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQ-ETLANITAV--------- 233 (361)
T ss_dssp EECCTTC---CCCCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSHH-HHHHHHHTT---------
T ss_pred eEcCCCC---ccccCCCCccEECchHHcCCCCCccccHHHHHHHHHHHHhCCCCCCCCCHH-HHHHHHHhc---------
Confidence 8764322 224467999999999999889999999999999999999999999653211 111111000
Q ss_pred hcccccCchhhhhHHHHHHHHHHHHHHHhccccCcCCCCCHHHHHHH
Q 002021 910 VDANLLSQEDIHFVAKEQCVSFVFNLAMECTMEFPKQRINAKEIVTK 956 (979)
Q Consensus 910 ~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~eil~~ 956 (979)
........+..++..+.+++.+|+..||++|||+.|+++|
T Consensus 234 -------~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~h 273 (361)
T 2yab_A 234 -------SYDFDEEFFSQTSELAKDFIRKLLVKETRKRLTIQEALRH 273 (361)
T ss_dssp -------CCCCCHHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHTS
T ss_pred -------CCCCCchhccCCCHHHHHHHHHHCCCChhHCcCHHHHhcC
Confidence 0001112234556779999999999999999999999865
No 74
>3bz5_A Internalin-J, INLJ; leucine rich repeat (LRR), cysteine ladder, asparagine ladder, virulence factor, solenoid, cell WALL; 2.70A {Listeria monocytogenes}
Probab=100.00 E-value=5e-39 Score=371.72 Aligned_cols=358 Identities=19% Similarity=0.175 Sum_probs=210.9
Q ss_pred CcccccCCccccccCcccEEecccccccccCCccccCCCCCcEEEccCCccCchhhhhhhccCCcccCCCCccceeeccc
Q 002021 106 NRLFGSIPSAIFTTYTLKYVCLRGNQLSGTFPSFISNKSSLQHLDLSSNALSGEIRANICREIPREFGNLPELELMSLAA 185 (979)
Q Consensus 106 n~~~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~~ip~~l~~l~~L~~L~L~~ 185 (979)
....+..|..++.+++|++|+|++|.+++. | .++.+++|++|+|++|.+++ +| ++.+++|++|+|++
T Consensus 28 ~~~~~~~~~~~~~l~~L~~L~Ls~n~l~~~-~-~l~~l~~L~~L~Ls~n~l~~---------~~--~~~l~~L~~L~Ls~ 94 (457)
T 3bz5_A 28 FEMQATDTISEEQLATLTSLDCHNSSITDM-T-GIEKLTGLTKLICTSNNITT---------LD--LSQNTNLTYLACDS 94 (457)
T ss_dssp TTCCTTSEEEHHHHTTCCEEECCSSCCCCC-T-TGGGCTTCSEEECCSSCCSC---------CC--CTTCTTCSEEECCS
T ss_pred cCcCcccccChhHcCCCCEEEccCCCcccC-h-hhcccCCCCEEEccCCcCCe---------Ec--cccCCCCCEEECcC
Confidence 334445555666777777777777777753 4 56777777777777777764 33 66667777777777
Q ss_pred ccccccccccccCCCCCCceecCCCeeeecCCccccccCccceeeccCCCCcCCCcccccCCCCCcCEEEccCCcccccc
Q 002021 186 NNLQGKIPLKIGNLRNLEKLDIGDNKLVGIAPIAIFNVSTLKILGLQDNSLSGCLSSIGYARLPNLEILSLWGNNFSGTI 265 (979)
Q Consensus 186 N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~ 265 (979)
|++++. | ++++++|++|++++|+++++ | +.++++|+.|++++|++++. .+..+++|++|++++|+..+.+
T Consensus 95 N~l~~~-~--~~~l~~L~~L~L~~N~l~~l-~--~~~l~~L~~L~l~~N~l~~l----~l~~l~~L~~L~l~~n~~~~~~ 164 (457)
T 3bz5_A 95 NKLTNL-D--VTPLTKLTYLNCDTNKLTKL-D--VSQNPLLTYLNCARNTLTEI----DVSHNTQLTELDCHLNKKITKL 164 (457)
T ss_dssp SCCSCC-C--CTTCTTCCEEECCSSCCSCC-C--CTTCTTCCEEECTTSCCSCC----CCTTCTTCCEEECTTCSCCCCC
T ss_pred CCCcee-e--cCCCCcCCEEECCCCcCCee-c--CCCCCcCCEEECCCCcccee----ccccCCcCCEEECCCCCccccc
Confidence 776653 2 66666667777766666664 2 55556666666666665553 1345555555555555333333
Q ss_pred CcccccCCCCcEEeccccccccccCccccccccccceeccccccccccchhhhhhcccCCCCccEEEccCCCCcccCCcc
Q 002021 266 PRFIFNASKLSILDLEGNSFSGFIPNTFGNLRNLSWLVLSDNYLTSSTQELSFLSSLSNCKFLKYFDLSYNPLYRILPRT 345 (979)
Q Consensus 266 p~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~~~~ 345 (979)
.+..+++|++|++++|++++. | ++.+++|+.|++++|+++..+ +..+
T Consensus 165 --~~~~l~~L~~L~ls~n~l~~l-~--l~~l~~L~~L~l~~N~l~~~~--------l~~l-------------------- 211 (457)
T 3bz5_A 165 --DVTPQTQLTTLDCSFNKITEL-D--VSQNKLLNRLNCDTNNITKLD--------LNQN-------------------- 211 (457)
T ss_dssp --CCTTCTTCCEEECCSSCCCCC-C--CTTCTTCCEEECCSSCCSCCC--------CTTC--------------------
T ss_pred --ccccCCcCCEEECCCCcccee-c--cccCCCCCEEECcCCcCCeec--------cccC--------------------
Confidence 244445555555555554432 2 344444444444444433321 1222
Q ss_pred ccccccccccEEEccCccccCCCCccccCCCcccEEEecCCCCCchhHHhhhcCCCCcEEEecCcccCCCccccccCCCC
Q 002021 346 TVGNLSHSLEEFKMSNCNISGGIPEEISNLTNLRTIYLGGNKLNGSILITLSKLQKLQDLGLKDNKLEGSIPYDICNLAE 425 (979)
Q Consensus 346 ~~~~l~~~L~~L~L~~n~i~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~ 425 (979)
++|++|++++|++++ +| ++.+++|+.|++++|++++.. +..+ ++
T Consensus 212 ------~~L~~L~Ls~N~l~~-ip--~~~l~~L~~L~l~~N~l~~~~---~~~l------------------------~~ 255 (457)
T 3bz5_A 212 ------IQLTFLDCSSNKLTE-ID--VTPLTQLTYFDCSVNPLTELD---VSTL------------------------SK 255 (457)
T ss_dssp ------TTCSEEECCSSCCSC-CC--CTTCTTCSEEECCSSCCSCCC---CTTC------------------------TT
T ss_pred ------CCCCEEECcCCcccc-cC--ccccCCCCEEEeeCCcCCCcC---HHHC------------------------CC
Confidence 233444444444443 22 455555666666665555432 2333 44
Q ss_pred CceEecCCCcccccCCccccCCCcCceEecCCCccc-cccccccCcCCCcEEEeccccccCCCccccccccccceEeccC
Q 002021 426 LYRLDLDGNKLSGSIPACFSNLTSLRIVSLGSNELT-SIPLTFWNLKDILNLNFSSNFLTGSLPLEIGSLKVLVGIDLSR 504 (979)
Q Consensus 426 L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~-~lp~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~Ls~ 504 (979)
|+.|++++| +|+.|++++|.+. .+| ++.+++|+.|++++|.+.+.+|. ...+|+.|++++
T Consensus 256 L~~L~l~~n--------------~L~~L~l~~n~~~~~~~--~~~l~~L~~L~Ls~n~~l~~l~~---~~~~L~~L~l~~ 316 (457)
T 3bz5_A 256 LTTLHCIQT--------------DLLEIDLTHNTQLIYFQ--AEGCRKIKELDVTHNTQLYLLDC---QAAGITELDLSQ 316 (457)
T ss_dssp CCEEECTTC--------------CCSCCCCTTCTTCCEEE--CTTCTTCCCCCCTTCTTCCEEEC---TTCCCSCCCCTT
T ss_pred CCEEeccCC--------------CCCEEECCCCccCCccc--ccccccCCEEECCCCcccceecc---CCCcceEechhh
Confidence 444444443 2334444444432 333 24456666666666666655553 335566666666
Q ss_pred CccCcccchhhcCCcccceeecCCccccCCCCCcccccccccccccccccccccCCccccCccccCeEeccCCcccccCC
Q 002021 505 NNFSGVIPTEIGGLKNLEYLFLGYNRLQGSIPNSFGDLISLKFLNLSNNNLSGVIPASLEKLSYLEDLNLSFNQLEGKIP 584 (979)
Q Consensus 505 N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p 584 (979)
| ++|++|+|++|+|++. + ++++++|+.||+++|+|++ ++.|..|++++|.++|. +
T Consensus 317 ~-------------~~L~~L~L~~N~l~~l-~--l~~l~~L~~L~l~~N~l~~--------l~~L~~L~l~~n~l~g~-~ 371 (457)
T 3bz5_A 317 N-------------PKLVYLYLNNTELTEL-D--VSHNTKLKSLSCVNAHIQD--------FSSVGKIPALNNNFEAE-G 371 (457)
T ss_dssp C-------------TTCCEEECTTCCCSCC-C--CTTCTTCSEEECCSSCCCB--------CTTGGGSSGGGTSEEEE-E
T ss_pred c-------------ccCCEEECCCCccccc-c--cccCCcCcEEECCCCCCCC--------ccccccccccCCcEEec-c
Confidence 5 6899999999999974 3 8999999999999999996 35677889999999987 2
Q ss_pred CCCCCCCcccccccCCcc
Q 002021 585 RGGSFGNFSAQSFEGNEL 602 (979)
Q Consensus 585 ~~~~~~~~~~~~~~~N~~ 602 (979)
.+..++...++.|..
T Consensus 372 ---~~~~l~~l~l~~N~l 386 (457)
T 3bz5_A 372 ---QTITMPKETLTNNSL 386 (457)
T ss_dssp ---EEEECCCBCCBTTBE
T ss_pred ---eeeecCccccccCcE
Confidence 344566667777754
No 75
>1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7
Probab=100.00 E-value=9.9e-41 Score=373.46 Aligned_cols=268 Identities=25% Similarity=0.404 Sum_probs=214.2
Q ss_pred HHhhCCCCCCceeeeecceEEEEEEcC------CCcEEEEEEeccccc-cchhcHHHHHHHHHhcCCCCeeeEEEeeccC
Q 002021 678 CRATDGFSENNLIGRGGFGSVYKASLG------DGMEVAVKVFTSQCG-RAFKSFDVECEIMKSIRHRNLIKVISSCSNE 750 (979)
Q Consensus 678 ~~~~~~~~~~~~lG~G~~g~Vy~~~~~------~~~~vAvK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~ 750 (979)
....++|+..+.||+|+||.||+|... +++.||||+++.... ...+.+.+|++++++++||||+++++++.++
T Consensus 43 ~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~ 122 (343)
T 1luf_A 43 EYPRNNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDNPNIVKLLGVCAVG 122 (343)
T ss_dssp BCCGGGCEEEEEEEECSSCEEEEEEEETSSTTSSEEEEEEEECCTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSS
T ss_pred EecHHHCeeeeeeeecCCeeEEEEEecCcCCCCCceeEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEccC
Confidence 334578999999999999999999653 458899999975432 3356789999999999999999999999999
Q ss_pred CeeEEEEEecCCCccceeeccCC-----------------------CCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecC
Q 002021 751 EFKALVLEYMPHGSLEKYLYSSN-----------------------CILDIFQRLNIMIDVASALEYLHFGYSAPVIHCD 807 (979)
Q Consensus 751 ~~~~lv~E~~~~g~L~~~l~~~~-----------------------~~l~~~~~~~i~~~ia~~L~~LH~~~~~~i~H~D 807 (979)
+..++||||+++|+|.+++.... ..+++.+++.++.||++||+||| +++|+|||
T Consensus 123 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH---~~~ivH~D 199 (343)
T 1luf_A 123 KPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYLS---ERKFVHRD 199 (343)
T ss_dssp SSCEEEEECCTTCBHHHHHHHTCC----------------------CCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSC
T ss_pred CceEEEEecCCCCcHHHHHHHhCcccccccccccccccccccccCCCCCCHHHHHHHHHHHHHHHHHHH---hCCeecCC
Confidence 99999999999999999987632 46899999999999999999999 99999999
Q ss_pred CCCCCEEeCCCCcEEEEeeccccccCCCCCcceecccccCCCCCCccccCCCCCCCchhHHHHHHHHHHHHc-CCCCCcc
Q 002021 808 LKPSNVLLDDNMVAHLSDFSIAKMLTGEDQSMIQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFT-GKKPTDE 886 (979)
Q Consensus 808 ik~~NIll~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~t-g~~P~~~ 886 (979)
|||+||++++++.+||+|||++................+|+.|+|||.+.+..++.++||||||+++|||++ |+.||..
T Consensus 200 lkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~ 279 (343)
T 1luf_A 200 LATRNCLVGENMVVKIADFGLSRNIYSADYYKADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGLQPYYG 279 (343)
T ss_dssp CSGGGEEECGGGCEEECCCSCHHHHTGGGCBC----CCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTT
T ss_pred CCcceEEECCCCeEEEeecCCCcccccCccccccCCCcccceecChhhhccCCcCcccccHHHHHHHHHHHhcCCCcCCC
Confidence 999999999999999999999987643333233345568899999999988889999999999999999999 9999875
Q ss_pred cccCcchHhHhhhhhcCCccchhhcccccCchhhhhHHHHHHHHHHHHHHHhccccCcCCCCCHHHHHHHHHHhHHhhcc
Q 002021 887 IFNGEMTLKHWVNDWLPISTMEVVDANLLSQEDIHFVAKEQCVSFVFNLAMECTMEFPKQRINAKEIVTKLLKIRDSLLR 966 (979)
Q Consensus 887 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~eil~~L~~~~~~~~~ 966 (979)
.... .....+.... . ...+..++..+.+++.+||+.||++|||+.|++++|+++.+.+..
T Consensus 280 ~~~~--~~~~~~~~~~-----------~-------~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~~~~~L~~~~~~~~~ 339 (343)
T 1luf_A 280 MAHE--EVIYYVRDGN-----------I-------LACPENCPLELYNLMRLCWSKLPADRPSFCSIHRILQRMCERAEG 339 (343)
T ss_dssp SCHH--HHHHHHHTTC-----------C-------CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTTC----
T ss_pred CChH--HHHHHHhCCC-----------c-------CCCCCCCCHHHHHHHHHHcccCcccCCCHHHHHHHHHHHHhhhhh
Confidence 3211 1111111000 0 001124556799999999999999999999999999999877655
Q ss_pred CC
Q 002021 967 NV 968 (979)
Q Consensus 967 ~~ 968 (979)
.+
T Consensus 340 ~~ 341 (343)
T 1luf_A 340 TV 341 (343)
T ss_dssp --
T ss_pred hc
Confidence 44
No 76
>4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A*
Probab=100.00 E-value=5.7e-41 Score=383.81 Aligned_cols=262 Identities=19% Similarity=0.248 Sum_probs=211.4
Q ss_pred HHHHHHhhCCCCCCceeeeecceEEEEEEc-CCCcEEEEEEecccc---ccchhcHHHHHHHHHhcCCCCeeeEEEeecc
Q 002021 674 YLELCRATDGFSENNLIGRGGFGSVYKASL-GDGMEVAVKVFTSQC---GRAFKSFDVECEIMKSIRHRNLIKVISSCSN 749 (979)
Q Consensus 674 ~~~~~~~~~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vAvK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~ 749 (979)
+.++....++|+..+.||+|+||+||+|+. .+++.||||++.+.. ....+.+.+|+.++..++||||++++++|.+
T Consensus 66 ~~~~~~~~~~y~~~~~LG~G~fG~V~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~~~~ 145 (437)
T 4aw2_A 66 VKQMRLHREDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDSKWITTLHYAFQD 145 (437)
T ss_dssp HHHHSCCGGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTTTCCHHHHHHHHHHSCTTTBCCEEEEEEC
T ss_pred hhcccCChhheEEEEEEEeCCCEEEEEEEEcCCCcEEEEEEEEHHHhhhHHHHHHHHHHHHHHHhCCCCCEEEEEEEEee
Confidence 344555668899999999999999999965 468899999986532 2334568999999999999999999999999
Q ss_pred CCeeEEEEEecCCCccceeeccCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCEEeCCCCcEEEEeeccc
Q 002021 750 EEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFSIA 829 (979)
Q Consensus 750 ~~~~~lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~i~H~Dik~~NIll~~~~~~kl~Dfg~~ 829 (979)
++..|+||||+++|+|.+++......+++..++.++.|++.||+||| +++|+||||||+|||++.++.+||+|||++
T Consensus 146 ~~~~~lV~Ey~~gg~L~~~l~~~~~~l~e~~~~~~~~qi~~aL~~LH---~~giiHrDLKp~NILl~~~g~vkL~DFGla 222 (437)
T 4aw2_A 146 DNNLYLVMDYYVGGDLLTLLSKFEDRLPEEMARFYLAEMVIAIDSVH---QLHYVHRDIKPDNILMDMNGHIRLADFGSC 222 (437)
T ss_dssp SSEEEEEECCCTTCBHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECTTSCEEECCCTTC
T ss_pred CCEEEEEEecCCCCcHHHHHHHccCCCCHHHHHHHHHHHHHHHHHHH---hCCeEecccCHHHeeEcCCCCEEEcchhhh
Confidence 99999999999999999999886667999999999999999999999 999999999999999999999999999999
Q ss_pred cccCCCCCcceecccccCCCCCCccccC-----CCCCCCchhHHHHHHHHHHHHcCCCCCcccccCcchHhHhhhhhcCC
Q 002021 830 KMLTGEDQSMIQTQTLATIGYMAPEYGR-----EGRVSANGDVYSFGIMLMETFTGKKPTDEIFNGEMTLKHWVNDWLPI 904 (979)
Q Consensus 830 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~-----~~~~~~~~DvwslG~il~el~tg~~P~~~~~~~~~~~~~~~~~~~~~ 904 (979)
+...... .......+||+.|+|||++. .+.++.++||||+||++|||++|+.||......+ .+...+....
T Consensus 223 ~~~~~~~-~~~~~~~~GT~~Y~APE~l~~~~~~~~~~~~~~DvwSlGvil~elltG~~Pf~~~~~~~-~~~~i~~~~~-- 298 (437)
T 4aw2_A 223 LKLMEDG-TVQSSVAVGTPDYISPEILQAMEGGKGRYGPECDWWSLGVCMYEMLYGETPFYAESLVE-TYGKIMNHKE-- 298 (437)
T ss_dssp EECCTTS-CEECCSCCSCGGGCCHHHHHHHHTSCCEECTHHHHHHHHHHHHHHHHSSCTTCCSSHHH-HHHHHHTHHH--
T ss_pred hhcccCC-CcccccccCCcCeeChHHHhhcccCCCCCCCcCeeHHHHHHHHHHHhCCCCCCCCChhH-HHHhhhhccc--
Confidence 8764332 22234467999999999986 5678999999999999999999999997532111 1111110000
Q ss_pred ccchhhcccccCchhhhhH-HHHHHHHHHHHHHHhccccCcCC--CCCHHHHHHH
Q 002021 905 STMEVVDANLLSQEDIHFV-AKEQCVSFVFNLAMECTMEFPKQ--RINAKEIVTK 956 (979)
Q Consensus 905 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~l~~l~~~cl~~dP~~--Rps~~eil~~ 956 (979)
...++ ....+++++.+++.+|+..+|++ ||+++|+++|
T Consensus 299 --------------~~~~p~~~~~~s~~~~dLi~~lL~~~~~r~~r~~~~eil~H 339 (437)
T 4aw2_A 299 --------------RFQFPTQVTDVSENAKDLIRRLICSREHRLGQNGIEDFKKH 339 (437)
T ss_dssp --------------HCCCCSSCCCSCHHHHHHHHTTSSCGGGCTTTTTTHHHHTS
T ss_pred --------------cccCCcccccCCHHHHHHHHHHhcccccccCCCCHHHHhCC
Confidence 00000 00124567899999999988888 9999999886
No 77
>3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} SCOP: d.144.1.7 PDB: 2qkr_A*
Probab=100.00 E-value=9.1e-40 Score=359.73 Aligned_cols=269 Identities=22% Similarity=0.285 Sum_probs=207.6
Q ss_pred hCCCCCCceeeeecceEEEEEEcCCCcEEEEEEeccccc--cchhcHHHHHHHHHhcCCCCeeeEEEeeccCCeeEEEEE
Q 002021 681 TDGFSENNLIGRGGFGSVYKASLGDGMEVAVKVFTSQCG--RAFKSFDVECEIMKSIRHRNLIKVISSCSNEEFKALVLE 758 (979)
Q Consensus 681 ~~~~~~~~~lG~G~~g~Vy~~~~~~~~~vAvK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~E 758 (979)
.++|+..+.||+|+||.||+|...+|+.||||++..... ...+.+.+|++++++++||||+++++++.+++..++|||
T Consensus 20 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e 99 (311)
T 3niz_A 20 MEKYQKLEKVGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNIVSLIDVIHSERCLTLVFE 99 (311)
T ss_dssp SCEEEEEEEEEECSSCEEEEEEETTSCEEEEEEEC------CHHHHHHHHHHHHHHCCCTTBCCEEEEECCSSCEEEEEE
T ss_pred HhhhHhhhhccCCCCeEEEEEEECCCCEEEEEEEecccccchhhHHHHHHHHHHHHcCCCCEeeeeeEEccCCEEEEEEc
Confidence 477899999999999999999887899999999865432 234678899999999999999999999999999999999
Q ss_pred ecCCCccceeeccCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCEEeCCCCcEEEEeeccccccCCCCCc
Q 002021 759 YMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFSIAKMLTGEDQS 838 (979)
Q Consensus 759 ~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~i~H~Dik~~NIll~~~~~~kl~Dfg~~~~~~~~~~~ 838 (979)
|+++ +|.+++......+++.++..++.|++.||+||| +++|+||||||+||+++.++.+||+|||+++.......
T Consensus 100 ~~~~-~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~LH---~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~~~~- 174 (311)
T 3niz_A 100 FMEK-DLKKVLDENKTGLQDSQIKIYLYQLLRGVAHCH---QHRILHRDLKPQNLLINSDGALKLADFGLARAFGIPVR- 174 (311)
T ss_dssp CCSE-EHHHHHHTCTTCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEECTTCCEEECCCTTCEETTSCCC-
T ss_pred CCCC-CHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCchHhEEECCCCCEEEccCcCceecCCCcc-
Confidence 9975 888888877777999999999999999999999 99999999999999999999999999999987643222
Q ss_pred ceecccccCCCCCCccccCC-CCCCCchhHHHHHHHHHHHHcCCCCCcccccCcchHhHhhhhh---cCCccchhhc---
Q 002021 839 MIQTQTLATIGYMAPEYGRE-GRVSANGDVYSFGIMLMETFTGKKPTDEIFNGEMTLKHWVNDW---LPISTMEVVD--- 911 (979)
Q Consensus 839 ~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwslG~il~el~tg~~P~~~~~~~~~~~~~~~~~~---~~~~~~~~~~--- 911 (979)
......+|+.|+|||++.+ ..++.++||||+||++|||++|+.||......+. ........ .+.......+
T Consensus 175 -~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~-~~~i~~~~~~~~~~~~~~~~~~~~ 252 (311)
T 3niz_A 175 -SYTHEVVTLWYRAPDVLMGSKKYSTSVDIWSIGCIFAEMITGKPLFPGVTDDDQ-LPKIFSILGTPNPREWPQVQELPL 252 (311)
T ss_dssp ----CCCCCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSTTTH-HHHHHHHHCCCCTTTSGGGTTSHH
T ss_pred -cccCCcccCCcCCHHHhcCCCCCCchHHhHHHHHHHHHHHhCCCCCCCCChHHH-HHHHHHHHCCCChHHhhhhhccch
Confidence 2344578999999998876 5689999999999999999999999976433322 22211111 1111111000
Q ss_pred --ccccCc--hhhhhHHHHHHHHHHHHHHHhccccCcCCCCCHHHHHHH
Q 002021 912 --ANLLSQ--EDIHFVAKEQCVSFVFNLAMECTMEFPKQRINAKEIVTK 956 (979)
Q Consensus 912 --~~~~~~--~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~eil~~ 956 (979)
...... ..........++.++.+++.+|++.||++|||++|+++|
T Consensus 253 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 301 (311)
T 3niz_A 253 WKQRTFQVFEKKPWSSIIPGFCQEGIDLLSNMLCFDPNKRISARDAMNH 301 (311)
T ss_dssp HHSCCCCCCCCCCHHHHSTTCCHHHHHHHHHHSCSCTTTSCCHHHHHTS
T ss_pred hhhcccccccCCcHHHhCcccCHHHHHHHHHHcCCChhHCCCHHHHhcC
Confidence 000000 000111223355678999999999999999999999975
No 78
>3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A
Probab=100.00 E-value=1.6e-40 Score=360.92 Aligned_cols=258 Identities=23% Similarity=0.413 Sum_probs=211.2
Q ss_pred hCCCCCCceeeeecceEEEEEEcCCCcEEEEEEeccccccchhcHHHHHHHHHhcCCCCeeeEEEeeccCCeeEEEEEec
Q 002021 681 TDGFSENNLIGRGGFGSVYKASLGDGMEVAVKVFTSQCGRAFKSFDVECEIMKSIRHRNLIKVISSCSNEEFKALVLEYM 760 (979)
Q Consensus 681 ~~~~~~~~~lG~G~~g~Vy~~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~E~~ 760 (979)
.++|+..+.||+|+||.||+|...++..||||++.... ...+.+.+|++++++++||||+++++++.+++..++||||+
T Consensus 23 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 101 (283)
T 3gen_A 23 PKDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGS-MSEDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYM 101 (283)
T ss_dssp GGGEEEEEECC---CEEEEEEEETTTEEEEEEEECTTS-BCHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEEEECCC
T ss_pred HHHHHhHhhcCCCCCceEEEEEEcCCCeEEEEEecCCC-CCHHHHHHHHHHHhcCCCCCEeeEEEEEecCCCeEEEEecc
Confidence 46788889999999999999988888899999997543 23467889999999999999999999999999999999999
Q ss_pred CCCccceeeccCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCEEeCCCCcEEEEeeccccccCCCCCcce
Q 002021 761 PHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFSIAKMLTGEDQSMI 840 (979)
Q Consensus 761 ~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~i~H~Dik~~NIll~~~~~~kl~Dfg~~~~~~~~~~~~~ 840 (979)
++++|.+++......+++.+++.++.|++.|++||| +++|+||||||+||+++.++.+||+|||.+....... ...
T Consensus 102 ~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH---~~~i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~~~~-~~~ 177 (283)
T 3gen_A 102 ANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLE---SKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDE-YTS 177 (283)
T ss_dssp TTCBHHHHHHCGGGCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSSCSGGGEEECTTSCEEECSTTGGGGBCCHH-HHS
T ss_pred CCCcHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHH---HCCccCCCCccceEEEcCCCCEEEccccccccccccc-ccc
Confidence 999999999876667999999999999999999999 9999999999999999999999999999998764321 122
Q ss_pred ecccccCCCCCCccccCCCCCCCchhHHHHHHHHHHHHc-CCCCCcccccCcchHhHhhhhhcCCccchhhcccccCchh
Q 002021 841 QTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFT-GKKPTDEIFNGEMTLKHWVNDWLPISTMEVVDANLLSQED 919 (979)
Q Consensus 841 ~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~t-g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 919 (979)
.....+|+.|+|||.+.+..++.++||||+|+++|||+| |+.||......+ ....+....
T Consensus 178 ~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~~l~t~g~~p~~~~~~~~--~~~~~~~~~----------------- 238 (283)
T 3gen_A 178 SVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSE--TAEHIAQGL----------------- 238 (283)
T ss_dssp TTSTTSCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTTCCTTTTSCHHH--HHHHHHTTC-----------------
T ss_pred ccCCccCcccCCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCccccChhH--HHHHHhccc-----------------
Confidence 233456788999999988889999999999999999998 999987532211 111100000
Q ss_pred hhhHHHHHHHHHHHHHHHhccccCcCCCCCHHHHHHHHHHhHHh
Q 002021 920 IHFVAKEQCVSFVFNLAMECTMEFPKQRINAKEIVTKLLKIRDS 963 (979)
Q Consensus 920 ~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~eil~~L~~~~~~ 963 (979)
....+..++..+.+++.+||+.||++|||+.|++++|+++.+.
T Consensus 239 -~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~L~~~~~~ 281 (283)
T 3gen_A 239 -RLYRPHLASEKVYTIMYSCWHEKADERPTFKILLSNILDVMDE 281 (283)
T ss_dssp -CCCCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred -CCCCCCcCCHHHHHHHHHHccCChhHCcCHHHHHHHHHHHhhc
Confidence 0001122345689999999999999999999999999998864
No 79
>3op5_A Serine/threonine-protein kinase VRK1; adenosine triphosphate, amino acid sequence, binding sites, domain, models, molecular; HET: REB; 2.40A {Homo sapiens} PDB: 2lav_A 2kty_A 2kul_A
Probab=100.00 E-value=3.3e-40 Score=371.92 Aligned_cols=283 Identities=16% Similarity=0.178 Sum_probs=217.8
Q ss_pred hCCCCCCceeeeecceEEEEEEcCC------CcEEEEEEeccccccc-----------hhcHHHHHHHHHhcCCCCeeeE
Q 002021 681 TDGFSENNLIGRGGFGSVYKASLGD------GMEVAVKVFTSQCGRA-----------FKSFDVECEIMKSIRHRNLIKV 743 (979)
Q Consensus 681 ~~~~~~~~~lG~G~~g~Vy~~~~~~------~~~vAvK~~~~~~~~~-----------~~~~~~E~~~l~~l~h~niv~l 743 (979)
.++|+..+.||+|+||.||+|...+ ++.||||++....... ...+..|+..++.++||||+++
T Consensus 34 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~~iv~~ 113 (364)
T 3op5_A 34 AAAWKVGLPIGQGGFGCIYLADMNSSESVGSDAPCVVKVEPSDNGPLFTELKFYQRAAKPEQIQKWIRTRKLKYLGVPKY 113 (364)
T ss_dssp CCEEEEEEECCCC-CCEEEEEEECCSSCCCTTCSEEEEEEETTCHHHHHHHHHHHHHCCHHHHHHHHHHTTCSCCCSCCE
T ss_pred CCeEEEEEEEecCCCeEEEEeeecCccccccccceEEEEeeccchhHHHHHHHHHhhhhhHHHHHHHHHhhccCCCCCeE
Confidence 4579999999999999999996643 4789999986543111 1223345566777789999999
Q ss_pred EEeeccC----CeeEEEEEecCCCccceeeccCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCEEeC--C
Q 002021 744 ISSCSNE----EFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLD--D 817 (979)
Q Consensus 744 ~~~~~~~----~~~~lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~i~H~Dik~~NIll~--~ 817 (979)
++++... ...++||||+ +++|.+++......+++.+++.++.||+.||+||| +++|+||||||+||+++ .
T Consensus 114 ~~~~~~~~~~~~~~~lv~e~~-g~~L~~~~~~~~~~l~~~~~~~i~~qi~~~l~~lH---~~~iiHrDlkp~Nill~~~~ 189 (364)
T 3op5_A 114 WGSGLHDKNGKSYRFMIMDRF-GSDLQKIYEANAKRFSRKTVLQLSLRILDILEYIH---EHEYVHGDIKASNLLLNYKN 189 (364)
T ss_dssp EEEEEEEETTEEEEEEEEECE-EEEHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEEESSC
T ss_pred EeeeeeccCCcceEEEEEeCC-CCCHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHH---HCCeEEecCCHHHEEEecCC
Confidence 9998664 5589999999 99999999887678999999999999999999999 89999999999999999 8
Q ss_pred CCcEEEEeeccccccCCCCCcc-----eecccccCCCCCCccccCCCCCCCchhHHHHHHHHHHHHcCCCCCcccccCcc
Q 002021 818 NMVAHLSDFSIAKMLTGEDQSM-----IQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFTGKKPTDEIFNGEM 892 (979)
Q Consensus 818 ~~~~kl~Dfg~~~~~~~~~~~~-----~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~tg~~P~~~~~~~~~ 892 (979)
++.+||+|||+++.+....... ......||+.|+|||++.+..++.++|||||||++|||+||+.||........
T Consensus 190 ~~~~kl~DFG~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~Pf~~~~~~~~ 269 (364)
T 3op5_A 190 PDQVYLVDYGLAYRYCPEGVHKAYAADPKRCHDGTIEFTSIDAHNGVAPSRRGDLEILGYCMIQWLTGHLPWEDNLKDPK 269 (364)
T ss_dssp TTCEEECCCTTCEESSGGGCCCCSSCCSSCCCCCCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSCCTTGGGTTCHH
T ss_pred CCeEEEEECCcceecccCCcccccccCcccccCCCCCccCHHHhCCCCCCchhhHHHHHHHHHHHHhCCCCccccccCHH
Confidence 8999999999998764332211 11334599999999999998999999999999999999999999986332221
Q ss_pred hHhHhhhhhcCCccchhhcccccCchhhhhHHHHHHHHHHHHHHHhccccCcCCCCCHHHHHHHHHHhHHhhccCCCCcc
Q 002021 893 TLKHWVNDWLPISTMEVVDANLLSQEDIHFVAKEQCVSFVFNLAMECTMEFPKQRINAKEIVTKLLKIRDSLLRNVGGRC 972 (979)
Q Consensus 893 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~eil~~L~~~~~~~~~~~~~~~ 972 (979)
. ..+..........++.+... ....++.++.+++..||..||++||++.++++.|+++.+..........
T Consensus 270 ~-~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~li~~cl~~~p~~RP~~~~l~~~l~~~~~~~~~~~~~~~ 339 (364)
T 3op5_A 270 Y-VRDSKIRYRENIASLMDKCF---------PAANAPGEIAKYMETVKLLDYTEKPLYENLRDILLQGLKAIGSKDDGKL 339 (364)
T ss_dssp H-HHHHHHHHHHCHHHHHHHHS---------CTTCCCHHHHHHHHHHHTCCTTCCCCHHHHHHHHHHHHHHTTCCCCCCC
T ss_pred H-HHHHHHHhhhhHHHHHHHhc---------ccccCHHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHHHHHcCCCcCCcc
Confidence 1 11111111111111111111 0123467899999999999999999999999999999999999999999
Q ss_pred eeccC
Q 002021 973 VRQSN 977 (979)
Q Consensus 973 ~~~~~ 977 (979)
+|...
T Consensus 340 dw~~~ 344 (364)
T 3op5_A 340 DLSVV 344 (364)
T ss_dssp CC---
T ss_pred ceEec
Confidence 98754
No 80
>1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ...
Probab=100.00 E-value=3.6e-40 Score=365.65 Aligned_cols=249 Identities=22% Similarity=0.292 Sum_probs=205.9
Q ss_pred hCCCCCCceeeeecceEEEEEE-cCCCcEEEEEEecccc---ccchhcHHHHHHHHHhcCCCCeeeEEEeeccCCeeEEE
Q 002021 681 TDGFSENNLIGRGGFGSVYKAS-LGDGMEVAVKVFTSQC---GRAFKSFDVECEIMKSIRHRNLIKVISSCSNEEFKALV 756 (979)
Q Consensus 681 ~~~~~~~~~lG~G~~g~Vy~~~-~~~~~~vAvK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 756 (979)
.++|+..+.||+|+||.||+|+ ..+|+.||||++++.. ....+.+.+|+++++.++||||+++++++.+.+..++|
T Consensus 4 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~lv 83 (337)
T 1o6l_A 4 MNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFV 83 (337)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCCTTBCCEEEEEECSSEEEEE
T ss_pred hHHeEEEEEEecCCCeEEEEEEECCCCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhCCCCcCcceEEEEEeCCEEEEE
Confidence 3578889999999999999995 4579999999997542 33456788899999999999999999999999999999
Q ss_pred EEecCCCccceeeccCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCEEeCCCCcEEEEeeccccccCCCC
Q 002021 757 LEYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFSIAKMLTGED 836 (979)
Q Consensus 757 ~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~i~H~Dik~~NIll~~~~~~kl~Dfg~~~~~~~~~ 836 (979)
|||+++|+|.+++...+ .+++.+++.++.||+.||+||| +++|+||||||+||+++.++.+||+|||+++......
T Consensus 84 ~E~~~gg~L~~~l~~~~-~~~~~~~~~~~~qi~~aL~~LH---~~~ivHrDlkp~NIll~~~g~vkL~DFG~a~~~~~~~ 159 (337)
T 1o6l_A 84 MEYANGGELFFHLSRER-VFTEERARFYGAEIVSALEYLH---SRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDG 159 (337)
T ss_dssp EECCTTCBHHHHHHHHS-CCCHHHHHHHHHHHHHHHHHHH---HTTCBCCCCCGGGEEECTTSCEEECCCTTCBCSCCTT
T ss_pred EeCCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---HCCeecCcCCHHHEEECCCCCEEEeeccchhhcccCC
Confidence 99999999999887643 6899999999999999999999 9999999999999999999999999999998643222
Q ss_pred CcceecccccCCCCCCccccCCCCCCCchhHHHHHHHHHHHHcCCCCCcccccCcchHhHhhhhhcCCccchhhcccccC
Q 002021 837 QSMIQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFTGKKPTDEIFNGEMTLKHWVNDWLPISTMEVVDANLLS 916 (979)
Q Consensus 837 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 916 (979)
......+||+.|+|||++.+..++.++||||+||++|||++|+.||...... .....+.. ...
T Consensus 160 --~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~--~~~~~i~~-----------~~~-- 222 (337)
T 1o6l_A 160 --ATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHE--RLFELILM-----------EEI-- 222 (337)
T ss_dssp --CCBCCCEECGGGCCGGGGSSSCBCTTHHHHHHHHHHHHHHHSSCSSCCSSHH--HHHHHHHH-----------CCC--
T ss_pred --CcccccccChhhCChhhhcCCCCCchhhcccchhHHHHHhcCCCCCCCCCHH--HHHHHHHc-----------CCC--
Confidence 2234567999999999999999999999999999999999999999652211 11110000 000
Q ss_pred chhhhhHHHHHHHHHHHHHHHhccccCcCCCC-----CHHHHHHH
Q 002021 917 QEDIHFVAKEQCVSFVFNLAMECTMEFPKQRI-----NAKEIVTK 956 (979)
Q Consensus 917 ~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rp-----s~~eil~~ 956 (979)
..+..+++++.+++.+|++.||++|| +++|+++|
T Consensus 223 ------~~p~~~s~~~~~li~~lL~~dP~~R~g~~~~~~~ei~~h 261 (337)
T 1o6l_A 223 ------RFPRTLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEH 261 (337)
T ss_dssp ------CCCTTSCHHHHHHHHHHTCSSTTTSTTCSTTTHHHHHTS
T ss_pred ------CCCCCCCHHHHHHHHHHhhcCHHHhcCCCCCCHHHHHcC
Confidence 01123456789999999999999999 99999887
No 81
>1o6v_A Internalin A; bacterial infection, extracellular recognition, cell WALL attached, leucine rich repeat; 1.5A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 1o6s_A* 1o6t_A 2omz_A 2omy_A 2omw_A 2omv_A 2omt_A 2omx_A 2omu_A
Probab=100.00 E-value=2.1e-38 Score=369.52 Aligned_cols=211 Identities=26% Similarity=0.350 Sum_probs=98.8
Q ss_pred CCCCeeeccCCcccccCCccccccCcccEEecccccccccCCccccCCCCCcEEEccCCccCchhhhhhhccCCcccCCC
Q 002021 96 SSLQSLNLSFNRLFGSIPSAIFTTYTLKYVCLRGNQLSGTFPSFISNKSSLQHLDLSSNALSGEIRANICREIPREFGNL 175 (979)
Q Consensus 96 ~~L~~L~L~~n~~~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~~ip~~l~~l 175 (979)
++|++|++++|.++ .+|. +..+++|++|+|++|.+++..| ++++++|++|+|++|.+++ ++. ++++
T Consensus 46 ~~l~~L~l~~~~i~-~l~~-~~~l~~L~~L~Ls~n~l~~~~~--~~~l~~L~~L~l~~n~l~~---------~~~-~~~l 111 (466)
T 1o6v_A 46 DQVTTLQADRLGIK-SIDG-VEYLNNLTQINFSNNQLTDITP--LKNLTKLVDILMNNNQIAD---------ITP-LANL 111 (466)
T ss_dssp HTCCEEECCSSCCC-CCTT-GGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCC---------CGG-GTTC
T ss_pred ccccEEecCCCCCc-cCcc-hhhhcCCCEEECCCCccCCchh--hhccccCCEEECCCCcccc---------Chh-hcCC
Confidence 34444444444443 2332 3444444444444444443322 4444455555555444442 122 4444
Q ss_pred CccceeecccccccccccccccCCCCCCceecCCCeeeecCCccccccCccceeeccCCCCcCCCcccccCCCCCcCEEE
Q 002021 176 PELELMSLAANNLQGKIPLKIGNLRNLEKLDIGDNKLVGIAPIAIFNVSTLKILGLQDNSLSGCLSSIGYARLPNLEILS 255 (979)
Q Consensus 176 ~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~l~~L~~L~ 255 (979)
++|++|++++|.+++..+ +.++++|++|++++|++.++. .+.++++|+.|+++ |.+.+.. .+..+++|++|+
T Consensus 112 ~~L~~L~L~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~~--~~~~l~~L~~L~l~-~~~~~~~---~~~~l~~L~~L~ 183 (466)
T 1o6v_A 112 TNLTGLTLFNNQITDIDP--LKNLTNLNRLELSSNTISDIS--ALSGLTSLQQLSFG-NQVTDLK---PLANLTTLERLD 183 (466)
T ss_dssp TTCCEEECCSSCCCCCGG--GTTCTTCSEEEEEEEEECCCG--GGTTCTTCSEEEEE-ESCCCCG---GGTTCTTCCEEE
T ss_pred CCCCEEECCCCCCCCChH--HcCCCCCCEEECCCCccCCCh--hhccCCcccEeecC-CcccCch---hhccCCCCCEEE
Confidence 445555554444443322 444555555555555554431 24444455555543 2232221 144555555555
Q ss_pred ccCCccccccCcccccCCCCcEEeccccccccccCccccccccccceeccccccccccchhhhhhcccCCCCccEEEccC
Q 002021 256 LWGNNFSGTIPRFIFNASKLSILDLEGNSFSGFIPNTFGNLRNLSWLVLSDNYLTSSTQELSFLSSLSNCKFLKYFDLSY 335 (979)
Q Consensus 256 L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~l~~l~~L~~L~Ls~ 335 (979)
+++|.+++. ..+..+++|++|++++|.+++..| ++.+++|+.|++++|+++..+ .+..+++|++|++++
T Consensus 184 l~~n~l~~~--~~l~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~~-------~l~~l~~L~~L~l~~ 252 (466)
T 1o6v_A 184 ISSNKVSDI--SVLAKLTNLESLIATNNQISDITP--LGILTNLDELSLNGNQLKDIG-------TLASLTNLTDLDLAN 252 (466)
T ss_dssp CCSSCCCCC--GGGGGCTTCSEEECCSSCCCCCGG--GGGCTTCCEEECCSSCCCCCG-------GGGGCTTCSEEECCS
T ss_pred CcCCcCCCC--hhhccCCCCCEEEecCCccccccc--ccccCCCCEEECCCCCcccch-------hhhcCCCCCEEECCC
Confidence 555555532 235555666666666666655433 455555555555555555432 233444455555554
Q ss_pred CCCc
Q 002021 336 NPLY 339 (979)
Q Consensus 336 N~l~ 339 (979)
|.+.
T Consensus 253 n~l~ 256 (466)
T 1o6v_A 253 NQIS 256 (466)
T ss_dssp SCCC
T ss_pred Cccc
Confidence 4443
No 82
>3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens}
Probab=100.00 E-value=3.7e-40 Score=373.87 Aligned_cols=267 Identities=27% Similarity=0.418 Sum_probs=216.9
Q ss_pred hCCCCCCceeeeecceEEEEEEc--------CCCcEEEEEEeccccc-cchhcHHHHHHHHHhc-CCCCeeeEEEeeccC
Q 002021 681 TDGFSENNLIGRGGFGSVYKASL--------GDGMEVAVKVFTSQCG-RAFKSFDVECEIMKSI-RHRNLIKVISSCSNE 750 (979)
Q Consensus 681 ~~~~~~~~~lG~G~~g~Vy~~~~--------~~~~~vAvK~~~~~~~-~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~ 750 (979)
.++|...+.||+|+||.||+|.. .++..||||++..... ...+.+.+|+++++++ +||||+++++++.++
T Consensus 68 ~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~~~ 147 (382)
T 3tt0_A 68 RDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQD 147 (382)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEEETSSTTCTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSS
T ss_pred hhheEeeeEEecCCCeEEEEEEEccccccccccceEEEEEeeccccCHHHHHHHHHHHHHHHHhcCCchhhhheeeeccC
Confidence 35788889999999999999964 2346799999976532 3446788999999999 899999999999999
Q ss_pred CeeEEEEEecCCCccceeeccCC---------------CCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCEEe
Q 002021 751 EFKALVLEYMPHGSLEKYLYSSN---------------CILDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLL 815 (979)
Q Consensus 751 ~~~~lv~E~~~~g~L~~~l~~~~---------------~~l~~~~~~~i~~~ia~~L~~LH~~~~~~i~H~Dik~~NIll 815 (979)
+..++||||+++|+|.+++.... ..+++.+++.++.|++.||+||| +++|+||||||+||++
T Consensus 148 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH---~~~ivH~Dlkp~NIll 224 (382)
T 3tt0_A 148 GPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLA---SKKCIHRDLAARNVLV 224 (382)
T ss_dssp SSCEEEEECCTTCBHHHHHHHTCCSSSSSCCCCCSSCCCCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEE
T ss_pred CceEEEEEecCCCcHHHHHHHhcccccccccccccccccccCHHHHHHHHHHHHHHHHHHH---hCCEecCCCCcceEEE
Confidence 99999999999999999987643 35899999999999999999999 8999999999999999
Q ss_pred CCCCcEEEEeeccccccCCCCCcceecccccCCCCCCccccCCCCCCCchhHHHHHHHHHHHHc-CCCCCcccccCcchH
Q 002021 816 DDNMVAHLSDFSIAKMLTGEDQSMIQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFT-GKKPTDEIFNGEMTL 894 (979)
Q Consensus 816 ~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~t-g~~P~~~~~~~~~~~ 894 (979)
++++.+||+|||+++...............+|+.|+|||++.+..++.++|||||||++|||++ |+.||...... ..
T Consensus 225 ~~~~~~kL~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~ellt~g~~p~~~~~~~--~~ 302 (382)
T 3tt0_A 225 TEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVE--EL 302 (382)
T ss_dssp CTTCCEEECSCSCCCCSSCCCTTCCCTTCCCGGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHH--HH
T ss_pred cCCCcEEEcccCcccccccccccccccCCCCCcceeCHHHhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCHH--HH
Confidence 9999999999999987654433333445567889999999999999999999999999999999 99998653211 11
Q ss_pred hHhhhhhcCCccchhhcccccCchhhhhHHHHHHHHHHHHHHHhccccCcCCCCCHHHHHHHHHHhHHhhccCCCC
Q 002021 895 KHWVNDWLPISTMEVVDANLLSQEDIHFVAKEQCVSFVFNLAMECTMEFPKQRINAKEIVTKLLKIRDSLLRNVGG 970 (979)
Q Consensus 895 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~eil~~L~~~~~~~~~~~~~ 970 (979)
...+.... ....+..++.++.+++.+||+.||++|||+.|++++|+++.......-.+
T Consensus 303 ~~~~~~~~------------------~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~~~~~~~~~~~ 360 (382)
T 3tt0_A 303 FKLLKEGH------------------RMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRIVALTSNQEMG 360 (382)
T ss_dssp HHHHHTTC------------------CCCCCSSCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHSCSCC--
T ss_pred HHHHHcCC------------------CCCCCccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHHHhcCCCC
Confidence 11111000 00011235567999999999999999999999999999999766554433
No 83
>1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A*
Probab=100.00 E-value=7.2e-40 Score=361.40 Aligned_cols=264 Identities=23% Similarity=0.377 Sum_probs=217.0
Q ss_pred hCCCCCCceeeeecceEEEEEEc------CCCcEEEEEEeccccc-cchhcHHHHHHHHHhc-CCCCeeeEEEeeccCCe
Q 002021 681 TDGFSENNLIGRGGFGSVYKASL------GDGMEVAVKVFTSQCG-RAFKSFDVECEIMKSI-RHRNLIKVISSCSNEEF 752 (979)
Q Consensus 681 ~~~~~~~~~lG~G~~g~Vy~~~~------~~~~~vAvK~~~~~~~-~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~ 752 (979)
.++|+..+.||+|+||.||+|+. .+++.||||++..... ...+.+.+|+++++++ +||||+++++++.+++.
T Consensus 22 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~~ 101 (313)
T 1t46_A 22 RNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACTIGGP 101 (313)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSS
T ss_pred hhhhhHHHhhCccCCcceEEEEEeeccccchhhhhHHHhcCcchhHHHHHHHHHHHHHHhhcccCCCeeeEEEEEecCCC
Confidence 36788899999999999999963 4578999999975432 2456788999999999 89999999999999999
Q ss_pred eEEEEEecCCCccceeeccCCC-----------------CCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCEEe
Q 002021 753 KALVLEYMPHGSLEKYLYSSNC-----------------ILDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLL 815 (979)
Q Consensus 753 ~~lv~E~~~~g~L~~~l~~~~~-----------------~l~~~~~~~i~~~ia~~L~~LH~~~~~~i~H~Dik~~NIll 815 (979)
.++||||+++|+|.+++..... .+++.+++.++.|++.||+||| +++|+||||||+||++
T Consensus 102 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dlkp~Nil~ 178 (313)
T 1t46_A 102 TLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLA---SKNCIHRDLAARNILL 178 (313)
T ss_dssp CEEEEECCTTEEHHHHHHHTTTTC--------------CCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEE
T ss_pred cEEEEecCCCCCHHHHHHhcccccccccccccccccccccCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCccceEEE
Confidence 9999999999999999876532 4899999999999999999999 9999999999999999
Q ss_pred CCCCcEEEEeeccccccCCCCCcceecccccCCCCCCccccCCCCCCCchhHHHHHHHHHHHHc-CCCCCcccccCcchH
Q 002021 816 DDNMVAHLSDFSIAKMLTGEDQSMIQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFT-GKKPTDEIFNGEMTL 894 (979)
Q Consensus 816 ~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~t-g~~P~~~~~~~~~~~ 894 (979)
+.++.+||+|||++................+|+.|+|||.+.+..++.++||||+|+++|||+| |+.||........ .
T Consensus 179 ~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~-~ 257 (313)
T 1t46_A 179 THGRITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSK-F 257 (313)
T ss_dssp ETTTEEEECCCGGGSCTTSCTTSEECSSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCSSHH-H
T ss_pred cCCCCEEEccccccccccccccceeccCCCCcceeeChHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCCCcccchhH-H
Confidence 9999999999999987754443333445567889999999988899999999999999999999 9999876432221 1
Q ss_pred hHhhhhhcCCccchhhcccccCchhhhhHHHHHHHHHHHHHHHhccccCcCCCCCHHHHHHHHHHhHHhhcc
Q 002021 895 KHWVNDWLPISTMEVVDANLLSQEDIHFVAKEQCVSFVFNLAMECTMEFPKQRINAKEIVTKLLKIRDSLLR 966 (979)
Q Consensus 895 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~eil~~L~~~~~~~~~ 966 (979)
...+..... ...+..++..+.+++.+||+.||.+|||+.|++++|+++.+....
T Consensus 258 ~~~~~~~~~------------------~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~~~~~ 311 (313)
T 1t46_A 258 YKMIKEGFR------------------MLSPEHAPAEMYDIMKTCWDADPLKRPTFKQIVQLIEKQISESTN 311 (313)
T ss_dssp HHHHHHTCC------------------CCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHTCC
T ss_pred HHHhccCCC------------------CCCcccCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHHHHHHhhc
Confidence 111111100 001123456789999999999999999999999999999876544
No 84
>1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=7.2e-40 Score=366.54 Aligned_cols=267 Identities=22% Similarity=0.368 Sum_probs=212.4
Q ss_pred hhCCCCCCceeeeecceEEEEEEc------CCCcEEEEEEecccc-ccchhcHHHHHHHHHhc-CCCCeeeEEEeeccCC
Q 002021 680 ATDGFSENNLIGRGGFGSVYKASL------GDGMEVAVKVFTSQC-GRAFKSFDVECEIMKSI-RHRNLIKVISSCSNEE 751 (979)
Q Consensus 680 ~~~~~~~~~~lG~G~~g~Vy~~~~------~~~~~vAvK~~~~~~-~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~ 751 (979)
..++|+..+.||+|+||.||+|.. .+++.||||++.... ....+.+.+|+++++++ +||||+++++++...+
T Consensus 43 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~ 122 (344)
T 1rjb_A 43 PRENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQLGSHENIVNLLGACTLSG 122 (344)
T ss_dssp CGGGEEEEEEEEECSSEEEEEEEEESCSSSSCEEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEECSSS
T ss_pred CHHHceeeeeecCCCCceeEEeeeeccccCCcceEEEEEecccccCHHHHHHHHHHHHHHHhhcCCCCeeeEEEEEeeCC
Confidence 346788899999999999999964 356789999997543 33457789999999999 8999999999999999
Q ss_pred eeEEEEEecCCCccceeeccCCC----------------------CCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCC
Q 002021 752 FKALVLEYMPHGSLEKYLYSSNC----------------------ILDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLK 809 (979)
Q Consensus 752 ~~~lv~E~~~~g~L~~~l~~~~~----------------------~l~~~~~~~i~~~ia~~L~~LH~~~~~~i~H~Dik 809 (979)
..++||||+++|+|.+++..... .+++..++.++.|++.||+||| +++|+|||||
T Consensus 123 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH---~~~ivH~Dik 199 (344)
T 1rjb_A 123 PIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLE---FKSCVHRDLA 199 (344)
T ss_dssp SCEEEEECCTTCBHHHHHHTTTTCC---------------------CCHHHHHHHHHHHHHHHHHHH---HTTEEETTCS
T ss_pred ccEEEEecCCCCcHHHHHhhccccccccccchhhhcccccccccccCCHHHHHHHHHHHHHHHHHHH---hCCcccCCCC
Confidence 99999999999999999976532 3789999999999999999999 9999999999
Q ss_pred CCCEEeCCCCcEEEEeeccccccCCCCCcceecccccCCCCCCccccCCCCCCCchhHHHHHHHHHHHHc-CCCCCcccc
Q 002021 810 PSNVLLDDNMVAHLSDFSIAKMLTGEDQSMIQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFT-GKKPTDEIF 888 (979)
Q Consensus 810 ~~NIll~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~t-g~~P~~~~~ 888 (979)
|+||+++.++.+||+|||++................+|+.|+|||.+.++.+++++||||||+++|||+| |+.||....
T Consensus 200 p~NIll~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~ 279 (344)
T 1rjb_A 200 ARNVLVTHGKVVKICDFGLARDIMSDSNYVVRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIFSLGVNPYPGIP 279 (344)
T ss_dssp GGGEEEETTTEEEECCCGGGSCGGGCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCC
T ss_pred hhhEEEcCCCcEEeCCCccCcccccCccceeccCccCccCccCHHHhccCCCChhHhHHHHHHHHHHHHcCCCCCcccCC
Confidence 9999999999999999999987654443334455667889999999988899999999999999999998 999997643
Q ss_pred cCcchHhHhhhhhcCCccchhhcccccCchhhhhHHHHHHHHHHHHHHHhccccCcCCCCCHHHHHHHHHHhHHhhccCC
Q 002021 889 NGEMTLKHWVNDWLPISTMEVVDANLLSQEDIHFVAKEQCVSFVFNLAMECTMEFPKQRINAKEIVTKLLKIRDSLLRNV 968 (979)
Q Consensus 889 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~eil~~L~~~~~~~~~~~ 968 (979)
... .....+..... ...+..+++++.+++.+||+.||.+|||+.|++++|+.+........
T Consensus 280 ~~~-~~~~~~~~~~~------------------~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~~~~~~~~~ 340 (344)
T 1rjb_A 280 VDA-NFYKLIQNGFK------------------MDQPFYATEEIYIIMQSCWAFDSRKRPSFPNLTSFLGCQLADAEEAM 340 (344)
T ss_dssp CSH-HHHHHHHTTCC------------------CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHC-------
T ss_pred cHH-HHHHHHhcCCC------------------CCCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHHHHHHHHHHH
Confidence 221 11111111100 01112345679999999999999999999999999999987665543
No 85
>3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 4g5j_A* 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* ...
Probab=100.00 E-value=2.5e-40 Score=367.03 Aligned_cols=258 Identities=25% Similarity=0.403 Sum_probs=204.6
Q ss_pred CCCCCCceeeeecceEEEEEEc-CCCcE----EEEEEecccc-ccchhcHHHHHHHHHhcCCCCeeeEEEeeccCCeeEE
Q 002021 682 DGFSENNLIGRGGFGSVYKASL-GDGME----VAVKVFTSQC-GRAFKSFDVECEIMKSIRHRNLIKVISSCSNEEFKAL 755 (979)
Q Consensus 682 ~~~~~~~~lG~G~~g~Vy~~~~-~~~~~----vAvK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 755 (979)
++|+..+.||+|+||.||+|.. .+++. ||+|++.... ....+.+.+|++++++++||||+++++++.+.. .++
T Consensus 15 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~-~~~ 93 (327)
T 3poz_A 15 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTST-VQL 93 (327)
T ss_dssp GGEEEEEEEEEETTEEEEEEEECC----CCEEEEEEEC-------CHHHHHHHHHHHHHCCBTTBCCEEEEEESSS-EEE
T ss_pred HHcccceEEeeCCCeEEEEEEEcCCCceEEEEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCEeEEEEEEecCC-eEE
Confidence 5688889999999999999964 34443 5888775433 234577899999999999999999999998765 779
Q ss_pred EEEecCCCccceeeccCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCEEeCCCCcEEEEeeccccccCCC
Q 002021 756 VLEYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFSIAKMLTGE 835 (979)
Q Consensus 756 v~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~i~H~Dik~~NIll~~~~~~kl~Dfg~~~~~~~~ 835 (979)
|+||+++|+|.+++......+++..++.++.|++.||+||| +++|+||||||+||+++.++.+||+|||+++.....
T Consensus 94 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~LH---~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~ 170 (327)
T 3poz_A 94 ITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAE 170 (327)
T ss_dssp EEECCTTCBHHHHHHHSTTSCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEEEETTEEEECCTTHHHHHTTT
T ss_pred EEEecCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHh---hCCeeCCCCChheEEECCCCCEEEccCcceeEccCC
Confidence 99999999999999887778999999999999999999999 899999999999999999999999999999877544
Q ss_pred CCcceecccccCCCCCCccccCCCCCCCchhHHHHHHHHHHHHc-CCCCCcccccCcchHhHhhhhhcCCccchhhcccc
Q 002021 836 DQSMIQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFT-GKKPTDEIFNGEMTLKHWVNDWLPISTMEVVDANL 914 (979)
Q Consensus 836 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~t-g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 914 (979)
..........+|+.|+|||++.+..++.++|||||||++|||+| |+.||......+ ....+....
T Consensus 171 ~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~--~~~~~~~~~------------ 236 (327)
T 3poz_A 171 EKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASE--ISSILEKGE------------ 236 (327)
T ss_dssp CC-------CCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGGG--HHHHHHTTC------------
T ss_pred cccccccCCCccccccChHHhccCCCCchhhhhhhHHHHHHHHhcCCCCccCCCHHH--HHHHHHcCC------------
Confidence 44433445567889999999999999999999999999999999 999997532221 111111110
Q ss_pred cCchhhhhHHHHHHHHHHHHHHHhccccCcCCCCCHHHHHHHHHHhHHh
Q 002021 915 LSQEDIHFVAKEQCVSFVFNLAMECTMEFPKQRINAKEIVTKLLKIRDS 963 (979)
Q Consensus 915 ~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~eil~~L~~~~~~ 963 (979)
....+..++..+.+++.+||+.||++||++.|++++|+++.+.
T Consensus 237 ------~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~ell~~l~~~~~~ 279 (327)
T 3poz_A 237 ------RLPQPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKMARD 279 (327)
T ss_dssp ------CCCCCTTBCHHHHHHHHHHTCSCGGGSCCHHHHHHHHHHHHTS
T ss_pred ------CCCCCccCCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHhh
Confidence 0011223456789999999999999999999999999998764
No 86
>3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A*
Probab=100.00 E-value=2.4e-39 Score=355.06 Aligned_cols=265 Identities=27% Similarity=0.378 Sum_probs=206.2
Q ss_pred hCCCCCCceeeeecceEEEEEEcCCCcEEEEEEeccccccchhcHHHHHHHHHh--cCCCCeeeEEEeecc----CCeeE
Q 002021 681 TDGFSENNLIGRGGFGSVYKASLGDGMEVAVKVFTSQCGRAFKSFDVECEIMKS--IRHRNLIKVISSCSN----EEFKA 754 (979)
Q Consensus 681 ~~~~~~~~~lG~G~~g~Vy~~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~--l~h~niv~l~~~~~~----~~~~~ 754 (979)
.++|+..+.||+|+||.||+|+. +++.||||++... ..+.+.+|.+++.. ++||||+++++++.+ ....+
T Consensus 7 ~~~y~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~---~~~~~~~e~~~~~~~~l~h~niv~~~~~~~~~~~~~~~~~ 82 (301)
T 3q4u_A 7 ARDITLLECVGKGRYGEVWRGSW-QGENVAVKIFSSR---DEKSWFRETELYNTVMLRHENILGFIASDMTSRHSSTQLW 82 (301)
T ss_dssp GGGCEEEEEEEECSSEEEEEEEE-TTEEEEEEEECGG---GHHHHHHHHHHHHHTCCCCTTBCCEEEEEEEEETTEEEEE
T ss_pred cCcEEEEEeeccCCCcEEEEEEE-CCEEEEEEEeccc---cchhhHHHHHHHHHhhccCcCeeeEEEeeccccCCCceeE
Confidence 46789999999999999999987 7899999998643 33556667777776 789999999998643 45689
Q ss_pred EEEEecCCCccceeeccCCCCCCHHHHHHHHHHHHHHHHHHhcCC-----CCCeEecCCCCCCEEeCCCCcEEEEeeccc
Q 002021 755 LVLEYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGY-----SAPVIHCDLKPSNVLLDDNMVAHLSDFSIA 829 (979)
Q Consensus 755 lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~-----~~~i~H~Dik~~NIll~~~~~~kl~Dfg~~ 829 (979)
+||||+++|+|.++++.. .+++..++.++.|++.||+|||... +++|+||||||+||+++.++.+||+|||++
T Consensus 83 lv~e~~~~g~L~~~l~~~--~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~a 160 (301)
T 3q4u_A 83 LITHYHEMGSLYDYLQLT--TLDTVSCLRIVLSIASGLAHLHIEIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLA 160 (301)
T ss_dssp EEECCCTTCBHHHHHTTC--CBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBCEEECSCCCGGGEEECTTSCEEECCCTTC
T ss_pred EehhhccCCCHHHHHhhc--ccCHHHHHHHHHHHHHHHHHHHHhhhhccCCCCeecCCCChHhEEEcCCCCEEEeeCCCe
Confidence 999999999999999654 6899999999999999999999322 679999999999999999999999999999
Q ss_pred cccCCCCCcc--eecccccCCCCCCccccCCC------CCCCchhHHHHHHHHHHHHcC----------CCCCcccccCc
Q 002021 830 KMLTGEDQSM--IQTQTLATIGYMAPEYGREG------RVSANGDVYSFGIMLMETFTG----------KKPTDEIFNGE 891 (979)
Q Consensus 830 ~~~~~~~~~~--~~~~~~gt~~y~aPE~~~~~------~~~~~~DvwslG~il~el~tg----------~~P~~~~~~~~ 891 (979)
+......... ......||+.|+|||.+.+. .+++++||||+||++|||+|| +.||.......
T Consensus 161 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DvwslG~il~el~tg~~~~~~~~~~~~pf~~~~~~~ 240 (301)
T 3q4u_A 161 VMHSQSTNQLDVGNNPRVGTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEVARRMVSNGIVEDYKPPFYDVVPND 240 (301)
T ss_dssp EEEETTTTEEECCCCCCCCCGGGCCHHHHTTCCCTTCHHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCTTTTTSCSS
T ss_pred eecccccccccccccccccccceeChhhhcCcCCCCcccCCchhhHHHHHHHHHHHHhhhcCccccccccccccccCCCC
Confidence 8664332221 12334799999999998776 456799999999999999999 77776544443
Q ss_pred chHhHhhhhhcCCccchhhcccccCchhhhhHHHHHHHHHHHHHHHhccccCcCCCCCHHHHHHHHHHh
Q 002021 892 MTLKHWVNDWLPISTMEVVDANLLSQEDIHFVAKEQCVSFVFNLAMECTMEFPKQRINAKEIVTKLLKI 960 (979)
Q Consensus 892 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~eil~~L~~~ 960 (979)
................ ...........++..+.+++.+||+.||++|||+.|+++.|+++
T Consensus 241 ~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~~L~~i 300 (301)
T 3q4u_A 241 PSFEDMRKVVCVDQQR---------PNIPNRWFSDPTLTSLAKLMKECWYQNPSARLTALRIKKTLTKI 300 (301)
T ss_dssp CCHHHHHHHHTTSCCC---------CCCCGGGGGSHHHHHHHHHHHHHCCSSGGGSCCHHHHHHHHHHH
T ss_pred cchhhhhHHHhccCCC---------CCCChhhccCccHHHHHHHHHHHhhcChhhCCCHHHHHHHHhcc
Confidence 3333222211111100 00011112235677899999999999999999999999999986
No 87
>3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens}
Probab=100.00 E-value=1.1e-40 Score=375.47 Aligned_cols=259 Identities=24% Similarity=0.404 Sum_probs=210.3
Q ss_pred CCCCCCceeeeecceEEEEEEcC------CCcEEEEEEecccc-ccchhcHHHHHHHHHhcCCCCeeeEEEeeccCCeeE
Q 002021 682 DGFSENNLIGRGGFGSVYKASLG------DGMEVAVKVFTSQC-GRAFKSFDVECEIMKSIRHRNLIKVISSCSNEEFKA 754 (979)
Q Consensus 682 ~~~~~~~~lG~G~~g~Vy~~~~~------~~~~vAvK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~ 754 (979)
++|+..+.||+|+||.||+|.+. +++.||||++.... ......+.+|+.++++++||||+++++++.+.+..+
T Consensus 71 ~~~~~~~~LG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~ 150 (367)
T 3l9p_A 71 KNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRF 150 (367)
T ss_dssp GGEEEEEECCCCSSSCEEEEEECC-----CCEEEEEEECCSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCE
T ss_pred hHeEEeeEeeeCCCEEEEEEEEccCCCCCcceeEEEEecccccChhhHHHHHHHHHHHHhCCCCCCCeEEEEEecCCCCE
Confidence 56888899999999999999742 46789999986542 234457889999999999999999999999999999
Q ss_pred EEEEecCCCccceeeccCC------CCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCEEeCCCC---cEEEEe
Q 002021 755 LVLEYMPHGSLEKYLYSSN------CILDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNM---VAHLSD 825 (979)
Q Consensus 755 lv~E~~~~g~L~~~l~~~~------~~l~~~~~~~i~~~ia~~L~~LH~~~~~~i~H~Dik~~NIll~~~~---~~kl~D 825 (979)
+||||+++|+|.+++.... ..+++.+++.++.|+++||+||| +++|+||||||+||+++.++ .+||+|
T Consensus 151 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH---~~~ivHrDlkp~NIll~~~~~~~~~kL~D 227 (367)
T 3l9p_A 151 ILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE---ENHFIHRDIAARNCLLTCPGPGRVAKIGD 227 (367)
T ss_dssp EEEECCTTEEHHHHHHHHSCCSSSCCCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEESCSSTTCCEEECC
T ss_pred EEEEeCCCCCHHHHHHhhccccCccccccHHHHHHHHHHHHHHHHHHH---hCCeeCCCCChhhEEEecCCCCceEEECC
Confidence 9999999999999987542 45899999999999999999999 99999999999999999555 599999
Q ss_pred eccccccCCCCCcceecccccCCCCCCccccCCCCCCCchhHHHHHHHHHHHHc-CCCCCcccccCcchHhHhhhhhcCC
Q 002021 826 FSIAKMLTGEDQSMIQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFT-GKKPTDEIFNGEMTLKHWVNDWLPI 904 (979)
Q Consensus 826 fg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~t-g~~P~~~~~~~~~~~~~~~~~~~~~ 904 (979)
||+++...............+|+.|+|||++.+..++.++|||||||++|||++ |+.||...... .....+....
T Consensus 228 FG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~ellt~g~~pf~~~~~~--~~~~~i~~~~-- 303 (367)
T 3l9p_A 228 FGMARDIYRAGYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQ--EVLEFVTSGG-- 303 (367)
T ss_dssp CHHHHHHHHHSSCTTCCGGGSCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHH--HHHHHHHTTC--
T ss_pred CccccccccccccccCCCcCCcccEECHHHhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHH--HHHHHHHcCC--
Confidence 999986543333333344568899999999988899999999999999999998 99998753211 1111111000
Q ss_pred ccchhhcccccCchhhhhHHHHHHHHHHHHHHHhccccCcCCCCCHHHHHHHHHHhHHh
Q 002021 905 STMEVVDANLLSQEDIHFVAKEQCVSFVFNLAMECTMEFPKQRINAKEIVTKLLKIRDS 963 (979)
Q Consensus 905 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~eil~~L~~~~~~ 963 (979)
....+..++..+.+++.+||+.||++|||+.|++++|+.+.+.
T Consensus 304 ----------------~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~eil~~l~~~~~~ 346 (367)
T 3l9p_A 304 ----------------RMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYCTQD 346 (367)
T ss_dssp ----------------CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHC
T ss_pred ----------------CCCCCccCCHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHhhC
Confidence 0011224556789999999999999999999999999988763
No 88
>2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A*
Probab=100.00 E-value=4.3e-40 Score=363.37 Aligned_cols=260 Identities=24% Similarity=0.394 Sum_probs=214.1
Q ss_pred hCCCCCCceeeeecceEEEEEEc------CCCcEEEEEEecccc-ccchhcHHHHHHHHHhcCCCCeeeEEEeeccCCee
Q 002021 681 TDGFSENNLIGRGGFGSVYKASL------GDGMEVAVKVFTSQC-GRAFKSFDVECEIMKSIRHRNLIKVISSCSNEEFK 753 (979)
Q Consensus 681 ~~~~~~~~~lG~G~~g~Vy~~~~------~~~~~vAvK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~ 753 (979)
.++|...+.||+|+||.||+|.. .+++.||||++.... ....+.+.+|+++++.++||||+++++++.+.+..
T Consensus 22 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~ 101 (314)
T 2ivs_A 22 RKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHPHVIKLYGACSQDGPL 101 (314)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEEETGGGCSSEEEEEEEECCTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSC
T ss_pred hhheeeeeeecccCCeeEEEEEEeccCcccCcceEEEEeccCCCCHHHHHHHHHHHHHHhhCCCCceeeEEEEEecCCce
Confidence 46788889999999999999954 356889999997543 23456788999999999999999999999999999
Q ss_pred EEEEEecCCCccceeeccCC-----------------------CCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCC
Q 002021 754 ALVLEYMPHGSLEKYLYSSN-----------------------CILDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKP 810 (979)
Q Consensus 754 ~lv~E~~~~g~L~~~l~~~~-----------------------~~l~~~~~~~i~~~ia~~L~~LH~~~~~~i~H~Dik~ 810 (979)
++||||+++|+|.+++.... ..+++.+++.++.|+++||+||| +++|+||||||
T Consensus 102 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH---~~~ivH~dikp 178 (314)
T 2ivs_A 102 LLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLA---EMKLVHRDLAA 178 (314)
T ss_dssp EEEEECCTTCBHHHHHHHTTTSTTEEC----------------CEECHHHHHHHHHHHHHHHHHHH---HTTEECCCCSG
T ss_pred EEEEeecCCCCHHHHHHHHhhccCCcccccccccccccccccccCcCHHHHHHHHHHHHHHHHHHH---HCCCcccccch
Confidence 99999999999999987643 24889999999999999999999 99999999999
Q ss_pred CCEEeCCCCcEEEEeeccccccCCCCCcceecccccCCCCCCccccCCCCCCCchhHHHHHHHHHHHHc-CCCCCccccc
Q 002021 811 SNVLLDDNMVAHLSDFSIAKMLTGEDQSMIQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFT-GKKPTDEIFN 889 (979)
Q Consensus 811 ~NIll~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~t-g~~P~~~~~~ 889 (979)
+||++++++.+||+|||++................+|+.|+|||.+.+..+++++||||+|+++|||++ |+.||.....
T Consensus 179 ~NIli~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~ 258 (314)
T 2ivs_A 179 RNILVAEGRKMKISDFGLSRDVYEEDSYVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGIPP 258 (314)
T ss_dssp GGEEEETTTEEEECCCTTCEECTTTSCEECSSCCCSCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCCG
T ss_pred heEEEcCCCCEEEccccccccccccccceeccCCCCcccccChhhhcCCCcCchhhHHHHHHHHHHHHhCCCCCCCCCCH
Confidence 999999999999999999987654443333344567889999999988889999999999999999999 9999875322
Q ss_pred CcchHhHhhhhhcCCccchhhcccccCchhhhhHHHHHHHHHHHHHHHhccccCcCCCCCHHHHHHHHHHhHHh
Q 002021 890 GEMTLKHWVNDWLPISTMEVVDANLLSQEDIHFVAKEQCVSFVFNLAMECTMEFPKQRINAKEIVTKLLKIRDS 963 (979)
Q Consensus 890 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~eil~~L~~~~~~ 963 (979)
.. ....+..... ...+..+++.+.+++.+||+.||++||++.|++++|+++.+.
T Consensus 259 ~~--~~~~~~~~~~------------------~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~l~~~l~~~~~~ 312 (314)
T 2ivs_A 259 ER--LFNLLKTGHR------------------MERPDNCSEEMYRLMLQCWKQEPDKRPVFADISKDLEKMMVK 312 (314)
T ss_dssp GG--HHHHHHTTCC------------------CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHT
T ss_pred HH--HHHHhhcCCc------------------CCCCccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHhh
Confidence 21 1111111000 011124556799999999999999999999999999998864
No 89
>2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens}
Probab=100.00 E-value=1.5e-39 Score=360.29 Aligned_cols=251 Identities=22% Similarity=0.308 Sum_probs=205.7
Q ss_pred CCCCCCceeeeecceEEEEEE-cCCCcEEEEEEecccccc------chhcHHHHHHHHHhcCCCCeeeEEEeeccCCeeE
Q 002021 682 DGFSENNLIGRGGFGSVYKAS-LGDGMEVAVKVFTSQCGR------AFKSFDVECEIMKSIRHRNLIKVISSCSNEEFKA 754 (979)
Q Consensus 682 ~~~~~~~~lG~G~~g~Vy~~~-~~~~~~vAvK~~~~~~~~------~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~ 754 (979)
+.|+..+.||+|+||.||+|. ..+|+.||||++...... ..+.+.+|+++++.++||||+++++++.+++..+
T Consensus 11 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~ 90 (326)
T 2y0a_A 11 DYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVI 90 (326)
T ss_dssp HHEEEEEEEECCSSEEEEEEEETTTCCEEEEEEEEBCCSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEE
T ss_pred cceEeceEEeeCCCeEEEEEEECCCCcEEEEEEEEccccccccchhhHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEE
Confidence 458888999999999999995 457999999998654321 3467889999999999999999999999999999
Q ss_pred EEEEecCCCccceeeccCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCEEeCCCC----cEEEEeecccc
Q 002021 755 LVLEYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNM----VAHLSDFSIAK 830 (979)
Q Consensus 755 lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~i~H~Dik~~NIll~~~~----~~kl~Dfg~~~ 830 (979)
+||||+++|+|.+++... ..+++.+++.++.|++.||+||| +++|+||||||+||+++.++ .+||+|||++.
T Consensus 91 lv~e~~~~~~L~~~l~~~-~~~~~~~~~~i~~qi~~al~~lH---~~~ivH~Dlkp~NIll~~~~~~~~~~kl~Dfg~a~ 166 (326)
T 2y0a_A 91 LILELVAGGELFDFLAEK-ESLTEEEATEFLKQILNGVYYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAH 166 (326)
T ss_dssp EEEECCCSCBHHHHHTTS-SCCBHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEESCSSSSSCCEEECCCTTCE
T ss_pred EEEEcCCCCCHHHHHHhc-CCcCHHHHHHHHHHHHHHHHHHH---HCCeEcCCCCHHHEEEecCCCCCCCEEEEECCCCe
Confidence 999999999999998764 46899999999999999999999 99999999999999999887 89999999998
Q ss_pred ccCCCCCcceecccccCCCCCCccccCCCCCCCchhHHHHHHHHHHHHcCCCCCcccccCcchHhHhhhhhcCCccchhh
Q 002021 831 MLTGEDQSMIQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFTGKKPTDEIFNGEMTLKHWVNDWLPISTMEVV 910 (979)
Q Consensus 831 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~ 910 (979)
....... .....||+.|+|||++.+..++.++||||+||++|||++|+.||......+ .........
T Consensus 167 ~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~-~~~~~~~~~--------- 233 (326)
T 2y0a_A 167 KIDFGNE---FKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQE-TLANVSAVN--------- 233 (326)
T ss_dssp ECCTTSC---CCCCCSCTTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSHHH-HHHHHHHTC---------
T ss_pred ECCCCCc---cccccCCcCcCCceeecCCCCCcHHHHHHHHHHHHHHHHCcCCCCCCCHHH-HHHHHHhcC---------
Confidence 7643221 234579999999999988899999999999999999999999996532111 111100000
Q ss_pred cccccCchhhhhHHHHHHHHHHHHHHHhccccCcCCCCCHHHHHHH
Q 002021 911 DANLLSQEDIHFVAKEQCVSFVFNLAMECTMEFPKQRINAKEIVTK 956 (979)
Q Consensus 911 ~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~eil~~ 956 (979)
..........++..+.+++.+|++.||++|||+.|+++|
T Consensus 234 -------~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~h 272 (326)
T 2y0a_A 234 -------YEFEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQH 272 (326)
T ss_dssp -------CCCCHHHHTTSCHHHHHHHHHHSCSSGGGSCCHHHHHHS
T ss_pred -------CCcCccccccCCHHHHHHHHHHccCChhhCCCHHHHhcC
Confidence 000111223456778999999999999999999999985
No 90
>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A
Probab=100.00 E-value=1.1e-39 Score=377.70 Aligned_cols=252 Identities=30% Similarity=0.454 Sum_probs=208.9
Q ss_pred hCCCCCCceeeeecceEEEEEEcCCCcEEEEEEeccccccchhcHHHHHHHHHhcCCCCeeeEEEeeccCC-eeEEEEEe
Q 002021 681 TDGFSENNLIGRGGFGSVYKASLGDGMEVAVKVFTSQCGRAFKSFDVECEIMKSIRHRNLIKVISSCSNEE-FKALVLEY 759 (979)
Q Consensus 681 ~~~~~~~~~lG~G~~g~Vy~~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~-~~~lv~E~ 759 (979)
.++|+..+.||+|+||.||+|.+ .|+.||||+++... ..+.+.+|++++++++||||+++++++.+.+ ..++||||
T Consensus 192 ~~~~~~~~~lG~G~fg~V~~~~~-~~~~vavK~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~iv~e~ 268 (450)
T 1k9a_A 192 MKELKLLQTIGKGEFGDVMLGDY-RGNKVAVKCIKNDA--TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEY 268 (450)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEE-TTEEEEEEEESSCT--TSHHHHHHHHHHHTCCCTTBCCEEEEEECTTSCEEEEEEC
T ss_pred hHHeEEEeeecCcCCeeEEEEEe-cCCeEEEEEeCCch--HHHHHHHHHHHHHhccCCCEEEEEEEEEcCCCceEEEEEe
Confidence 46688889999999999999988 47899999997543 4578999999999999999999999976654 78999999
Q ss_pred cCCCccceeeccCCC-CCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCEEeCCCCcEEEEeeccccccCCCCCc
Q 002021 760 MPHGSLEKYLYSSNC-ILDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFSIAKMLTGEDQS 838 (979)
Q Consensus 760 ~~~g~L~~~l~~~~~-~l~~~~~~~i~~~ia~~L~~LH~~~~~~i~H~Dik~~NIll~~~~~~kl~Dfg~~~~~~~~~~~ 838 (979)
+++|+|.+++...+. .+++..++.++.|+++||+||| +++|+||||||+||++++++.+||+|||+++.....
T Consensus 269 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH---~~~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~--- 342 (450)
T 1k9a_A 269 MAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLE---GNNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASST--- 342 (450)
T ss_dssp CTTCBHHHHHHHHCTTTCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCCGGGEEECTTSCEEECCCTTCEECC-----
T ss_pred cCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHH---hCCeeCCCCCHhhEEECCCCCEEEeeCCCccccccc---
Confidence 999999999986543 4799999999999999999999 999999999999999999999999999999854321
Q ss_pred ceecccccCCCCCCccccCCCCCCCchhHHHHHHHHHHHHc-CCCCCcccccCcchHhHhhhhhcCCccchhhcccccCc
Q 002021 839 MIQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFT-GKKPTDEIFNGEMTLKHWVNDWLPISTMEVVDANLLSQ 917 (979)
Q Consensus 839 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~t-g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 917 (979)
.....+++.|+|||.+.+..++.++|||||||++|||+| |+.||......+. ...+..
T Consensus 343 --~~~~~~~~~y~aPE~~~~~~~~~~sDvwslG~~l~el~t~g~~P~~~~~~~~~--~~~i~~----------------- 401 (450)
T 1k9a_A 343 --QDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDV--VPRVEK----------------- 401 (450)
T ss_dssp ------CCCTTTSCHHHHHSSCCCHHHHHHHHHHHHHHHHTTTCCSSTTSCTTTH--HHHHHT-----------------
T ss_pred --ccCCCCCcceeCHHHhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHHHH--HHHHHc-----------------
Confidence 122357889999999999999999999999999999998 9999975432211 111100
Q ss_pred hhhhhHHHHHHHHHHHHHHHhccccCcCCCCCHHHHHHHHHHhHHh
Q 002021 918 EDIHFVAKEQCVSFVFNLAMECTMEFPKQRINAKEIVTKLLKIRDS 963 (979)
Q Consensus 918 ~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~eil~~L~~~~~~ 963 (979)
..+...+..+++.+.++|.+||+.||++|||+.|+++.|+++...
T Consensus 402 -~~~~~~p~~~~~~l~~li~~cl~~dp~~Rpt~~~l~~~L~~i~~~ 446 (450)
T 1k9a_A 402 -GYKMDAPDGCPPAVYDVMKNCWHLDAATRPTFLQLREQLEHIRTH 446 (450)
T ss_dssp -TCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHT
T ss_pred -CCCCCCCCcCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHHh
Confidence 001112345677899999999999999999999999999999865
No 91
>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B
Probab=100.00 E-value=1.8e-40 Score=384.96 Aligned_cols=264 Identities=24% Similarity=0.420 Sum_probs=215.9
Q ss_pred hhCCCCCCceeeeecceEEEEEEcCCCcEEEEEEeccccccchhcHHHHHHHHHhcCCCCeeeEEEeeccCCeeEEEEEe
Q 002021 680 ATDGFSENNLIGRGGFGSVYKASLGDGMEVAVKVFTSQCGRAFKSFDVECEIMKSIRHRNLIKVISSCSNEEFKALVLEY 759 (979)
Q Consensus 680 ~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~E~ 759 (979)
..++|+..+.||+|+||.||+|.+.++..||||+++... ...+.+.+|+++++.++||||+++++++. .+..++||||
T Consensus 186 ~~~~~~~~~~lG~G~fg~V~~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~h~~iv~l~~~~~-~~~~~lv~e~ 263 (454)
T 1qcf_A 186 PRESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPGS-MSVEAFLAEANVMKTLQHDKLVKLHAVVT-KEPIYIITEF 263 (454)
T ss_dssp CGGGEEEEEEEECCSSEEEEEEEETTTEEEEEEEECTTS-BCHHHHHHHHHHHTTCCCTTBCCEEEEEC-SSSCEEEECC
T ss_pred chHHeEEEEEcccCCceEEEEEEECCccEEEEEEecCCC-ccHHHHHHHHHHHhhCCCCCEeeEEEEEe-CCccEEEEee
Confidence 346788889999999999999988888999999997543 35678999999999999999999999986 5678999999
Q ss_pred cCCCccceeeccCC-CCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCEEeCCCCcEEEEeeccccccCCCCCc
Q 002021 760 MPHGSLEKYLYSSN-CILDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFSIAKMLTGEDQS 838 (979)
Q Consensus 760 ~~~g~L~~~l~~~~-~~l~~~~~~~i~~~ia~~L~~LH~~~~~~i~H~Dik~~NIll~~~~~~kl~Dfg~~~~~~~~~~~ 838 (979)
+++|+|.+++.... ..+++.+++.++.||+.||+||| +++|+||||||+||+++.++.+||+|||+++...... .
T Consensus 264 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH---~~~ivHrDlkp~Nill~~~~~~kl~DFG~a~~~~~~~-~ 339 (454)
T 1qcf_A 264 MAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIE---QRNYIHRDLRAANILVSASLVCKIADFGLARVIEDNE-Y 339 (454)
T ss_dssp CTTCBHHHHHHSHHHHTCCHHHHHHHHHHHHHHHHHHH---HTTCCCSSCSGGGEEECTTCCEEECSTTGGGGBCCHH-H
T ss_pred cCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHH---hCCccCCCCCHHHEEECCCCcEEEeeCCCceEcCCCc-e
Confidence 99999999997542 36889999999999999999999 9999999999999999999999999999998764221 1
Q ss_pred ceecccccCCCCCCccccCCCCCCCchhHHHHHHHHHHHHc-CCCCCcccccCcchHhHhhhhhcCCccchhhcccccCc
Q 002021 839 MIQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFT-GKKPTDEIFNGEMTLKHWVNDWLPISTMEVVDANLLSQ 917 (979)
Q Consensus 839 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~t-g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 917 (979)
.......+|+.|+|||.+..+.++.++|||||||++|||+| |+.||......+ ....+...
T Consensus 340 ~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~t~g~~P~~~~~~~~--~~~~i~~~---------------- 401 (454)
T 1qcf_A 340 TAREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNPE--VIRALERG---------------- 401 (454)
T ss_dssp HTTCSSSSCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHHH--HHHHHHHT----------------
T ss_pred eccCCCcccccccCHHHhccCCCCcHHHHHhHHHHHHHHHhCCCCCCCCCCHHH--HHHHHHcC----------------
Confidence 11233456788999999988899999999999999999999 999997532211 11111100
Q ss_pred hhhhhHHHHHHHHHHHHHHHhccccCcCCCCCHHHHHHHHHHhHHhhccCCC
Q 002021 918 EDIHFVAKEQCVSFVFNLAMECTMEFPKQRINAKEIVTKLLKIRDSLLRNVG 969 (979)
Q Consensus 918 ~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~eil~~L~~~~~~~~~~~~ 969 (979)
.+.+.+..+++++.++|.+||+.||++|||+.+|++.|+++..+...++.
T Consensus 402 --~~~~~~~~~~~~l~~li~~cl~~dp~~RPt~~~i~~~L~~~~~~~~~~~~ 451 (454)
T 1qcf_A 402 --YRMPRPENCPEELYNIMMRCWKNRPEERPTFEYIQSVLDDFYTATESQYE 451 (454)
T ss_dssp --CCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTSSSSSCCSSB
T ss_pred --CCCCCCCCCCHHHHHHHHHHccCChhHCcCHHHHHHHHHHHHhccccccc
Confidence 01112235677899999999999999999999999999998876555543
No 92
>3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe}
Probab=100.00 E-value=6e-40 Score=363.46 Aligned_cols=247 Identities=26% Similarity=0.385 Sum_probs=203.5
Q ss_pred hCCCCCCceeeeecceEEEEEE-cCCCcEEEEEEecccc---ccchhcHHHHHHHHHhcCCCCeeeEEEeeccCCeeEEE
Q 002021 681 TDGFSENNLIGRGGFGSVYKAS-LGDGMEVAVKVFTSQC---GRAFKSFDVECEIMKSIRHRNLIKVISSCSNEEFKALV 756 (979)
Q Consensus 681 ~~~~~~~~~lG~G~~g~Vy~~~-~~~~~~vAvK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 756 (979)
.++|...+.||+|+||.||+|. ..+++.||||++.... ....+.+.+|+++++.++||||+++++++.+++..++|
T Consensus 8 i~~Y~i~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv 87 (336)
T 3h4j_B 8 IGPYIIRETLGEGSFGKVKLATHYKTQQKVALKFISRQLLKKSDMHMRVEREISYLKLLRHPHIIKLYDVITTPTDIVMV 87 (336)
T ss_dssp ETTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCSHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEE
T ss_pred cCCEEEEEEEecCCCeEEEEEEECCCCCEEEEEEEehHHccchhHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEE
Confidence 3678899999999999999995 4689999999986432 22345788999999999999999999999999999999
Q ss_pred EEecCCCccceeeccCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCEEeCCCCcEEEEeeccccccCCCC
Q 002021 757 LEYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFSIAKMLTGED 836 (979)
Q Consensus 757 ~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~i~H~Dik~~NIll~~~~~~kl~Dfg~~~~~~~~~ 836 (979)
|||+ +|+|.+++...+ .+++.+++.++.|++.|++||| +++|+||||||+||++++++.+||+|||++.......
T Consensus 88 ~E~~-~g~l~~~l~~~~-~l~~~~~~~i~~qi~~aL~~LH---~~givH~Dlkp~NIll~~~~~~kl~DFG~s~~~~~~~ 162 (336)
T 3h4j_B 88 IEYA-GGELFDYIVEKK-RMTEDEGRRFFQQIICAIEYCH---RHKIVHRDLKPENLLLDDNLNVKIADFGLSNIMTDGN 162 (336)
T ss_dssp ECCC-CEEHHHHHHHHC-SCCHHHHHHHHHHHHHHHHHHH---HHTCCCCCCSTTTEEECTTCCEEECCSSCTBTTTTSB
T ss_pred EECC-CCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHH---HCCeEecCCchhhEEEcCCCCEEEEEeccceeccCCc
Confidence 9999 679988886643 6899999999999999999999 8999999999999999999999999999998764332
Q ss_pred CcceecccccCCCCCCccccCCCCC-CCchhHHHHHHHHHHHHcCCCCCcccccCcchHhHhhhhhcCCccchhhccccc
Q 002021 837 QSMIQTQTLATIGYMAPEYGREGRV-SANGDVYSFGIMLMETFTGKKPTDEIFNGEMTLKHWVNDWLPISTMEVVDANLL 915 (979)
Q Consensus 837 ~~~~~~~~~gt~~y~aPE~~~~~~~-~~~~DvwslG~il~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 915 (979)
. ....+||+.|+|||++.+..+ ++++||||+||++|+|++|+.||......... ..+...
T Consensus 163 ~---~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~Pf~~~~~~~~~--------------~~i~~~-- 223 (336)
T 3h4j_B 163 F---LKTSCGSPNYAAPEVINGKLYAGPEVDVWSCGIVLYVMLVGRLPFDDEFIPNLF--------------KKVNSC-- 223 (336)
T ss_dssp T---TCCCTTSTTTSCGGGSCCSGGGCHHHHHHHHHHHHHHHHHSSCSSBCSSSTTCB--------------CCCCSS--
T ss_pred c---cccccCCcCcCCHHHHcCCCCCCCccchhHHHHHHHHHHhCCCCCCCccHHHHH--------------HHHHcC--
Confidence 1 244579999999999987775 78999999999999999999999753221110 000000
Q ss_pred CchhhhhHHHHHHHHHHHHHHHhccccCcCCCCCHHHHHHH
Q 002021 916 SQEDIHFVAKEQCVSFVFNLAMECTMEFPKQRINAKEIVTK 956 (979)
Q Consensus 916 ~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~eil~~ 956 (979)
....+..+++++.+++.+|++.||.+|||+.|+++|
T Consensus 224 -----~~~~p~~~s~~~~~li~~~L~~dP~~Rpt~~eil~h 259 (336)
T 3h4j_B 224 -----VYVMPDFLSPGAQSLIRRMIVADPMQRITIQEIRRD 259 (336)
T ss_dssp -----CCCCCTTSCHHHHHHHHTTSCSSGGGSCCHHHHTTC
T ss_pred -----CCCCcccCCHHHHHHHHHHcCCChhHCcCHHHHHhC
Confidence 001122345678999999999999999999999886
No 93
>4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp}
Probab=100.00 E-value=1e-39 Score=356.38 Aligned_cols=261 Identities=23% Similarity=0.385 Sum_probs=207.5
Q ss_pred hCCCCCCceeeeecceEEEEEE-cCCCcEEEEEEeccccc---cchhcHHHHHHHHHhcCCCCeeeEEEeeccCCeeEEE
Q 002021 681 TDGFSENNLIGRGGFGSVYKAS-LGDGMEVAVKVFTSQCG---RAFKSFDVECEIMKSIRHRNLIKVISSCSNEEFKALV 756 (979)
Q Consensus 681 ~~~~~~~~~lG~G~~g~Vy~~~-~~~~~~vAvK~~~~~~~---~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 756 (979)
.++|+..+.||+|+||.||+|. ..+++.||+|++..... ...+.+.+|++++++++||||+++++++.+++..++|
T Consensus 10 ~~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~lv 89 (294)
T 4eqm_A 10 NERYKIVDKLGGGGMSTVYLAEDTILNIKVAIKAIFIPPREKEETLKRFEREVHNSSQLSHQNIVSMIDVDEEDDCYYLV 89 (294)
T ss_dssp ETTEEEEEEEEEETTEEEEEEEETTTCSEEEEEEEECCSSCCHHHHHHHHHHHHHHTTCCBTTBCCEEEEEECSSEEEEE
T ss_pred hccEEEEEEEccCCCEEEEEEEECCCCCeEEEEEeccCccccHHHHHHHHHHHHHHhcCCCCCCceEEEeeeeCCeEEEE
Confidence 3678899999999999999995 55789999999854322 2346788999999999999999999999999999999
Q ss_pred EEecCCCccceeeccCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCEEeCCCCcEEEEeeccccccCCCC
Q 002021 757 LEYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFSIAKMLTGED 836 (979)
Q Consensus 757 ~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~i~H~Dik~~NIll~~~~~~kl~Dfg~~~~~~~~~ 836 (979)
|||+++++|.+++...+ .+++.+++.++.|++.|++||| +++|+||||||+||+++.++.+||+|||++.......
T Consensus 90 ~e~~~g~~L~~~l~~~~-~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~ 165 (294)
T 4eqm_A 90 MEYIEGPTLSEYIESHG-PLSVDTAINFTNQILDGIKHAH---DMRIVHRDIKPQNILIDSNKTLKIFDFGIAKALSETS 165 (294)
T ss_dssp EECCCSCBHHHHHHHHC-SCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEECTTSCEEECCCSSSTTC----
T ss_pred EeCCCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCCHHHEEECCCCCEEEEeCCCcccccccc
Confidence 99999999999987654 6899999999999999999999 9999999999999999999999999999998764322
Q ss_pred CcceecccccCCCCCCccccCCCCCCCchhHHHHHHHHHHHHcCCCCCcccccCcchHhHhhhhhcCCccchhhcccccC
Q 002021 837 QSMIQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFTGKKPTDEIFNGEMTLKHWVNDWLPISTMEVVDANLLS 916 (979)
Q Consensus 837 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 916 (979)
........||+.|+|||.+.+..++.++||||+|+++|||++|+.||............ ... .
T Consensus 166 -~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~~~~~~~----~~~-~----------- 228 (294)
T 4eqm_A 166 -LTQTNHVLGTVQYFSPEQAKGEATDECTDIYSIGIVLYEMLVGEPPFNGETAVSIAIKH----IQD-S----------- 228 (294)
T ss_dssp ----------CCSSCCHHHHHTCCCCTTHHHHHHHHHHHHHHHSSCSSCSSCHHHHHHHH----HSS-C-----------
T ss_pred -ccccCccccCccccCHhHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCChHHHHHHH----hhc-c-----------
Confidence 12223456899999999999989999999999999999999999999753221111111 000 0
Q ss_pred chhhhhHHHHHHHHHHHHHHHhccccCcCCCC-CHHHHHHHHHHhHH
Q 002021 917 QEDIHFVAKEQCVSFVFNLAMECTMEFPKQRI-NAKEIVTKLLKIRD 962 (979)
Q Consensus 917 ~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rp-s~~eil~~L~~~~~ 962 (979)
...........++..+.+++.+|+..||++|| +++++.+.|+++..
T Consensus 229 ~~~~~~~~~~~~~~~l~~li~~~l~~dp~~R~~~~~~l~~~l~~~~~ 275 (294)
T 4eqm_A 229 VPNVTTDVRKDIPQSLSNVILRATEKDKANRYKTIQEMKDDLSSVLH 275 (294)
T ss_dssp CCCHHHHSCTTSCHHHHHHHHHHSCSSGGGSCSSHHHHHHHHHTSSS
T ss_pred CCCcchhcccCCCHHHHHHHHHHhcCCHhHccccHHHHHHHHHHHHh
Confidence 00011112234567799999999999999999 99999999988764
No 94
>1o6v_A Internalin A; bacterial infection, extracellular recognition, cell WALL attached, leucine rich repeat; 1.5A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 1o6s_A* 1o6t_A 2omz_A 2omy_A 2omw_A 2omv_A 2omt_A 2omx_A 2omu_A
Probab=100.00 E-value=5.5e-38 Score=366.03 Aligned_cols=345 Identities=24% Similarity=0.361 Sum_probs=163.4
Q ss_pred ccCcccEEecccccccccCCccccCCCCCcEEEccCCccCchhhhhhhccCCcccCCCCccceeeccccccccccccccc
Q 002021 118 TTYTLKYVCLRGNQLSGTFPSFISNKSSLQHLDLSSNALSGEIRANICREIPREFGNLPELELMSLAANNLQGKIPLKIG 197 (979)
Q Consensus 118 ~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~~ip~~l~~l~~L~~L~L~~N~l~~~~p~~~~ 197 (979)
.+.+|+.|++++|.+.. +|. +..+++|++|||++|.+++ +|. ++++++|++|++++|.+++..+ ++
T Consensus 44 ~l~~l~~L~l~~~~i~~-l~~-~~~l~~L~~L~Ls~n~l~~---------~~~-~~~l~~L~~L~l~~n~l~~~~~--~~ 109 (466)
T 1o6v_A 44 DLDQVTTLQADRLGIKS-IDG-VEYLNNLTQINFSNNQLTD---------ITP-LKNLTKLVDILMNNNQIADITP--LA 109 (466)
T ss_dssp HHHTCCEEECCSSCCCC-CTT-GGGCTTCCEEECCSSCCCC---------CGG-GTTCTTCCEEECCSSCCCCCGG--GT
T ss_pred HhccccEEecCCCCCcc-Ccc-hhhhcCCCEEECCCCccCC---------chh-hhccccCCEEECCCCccccChh--hc
Confidence 35566677777666663 342 5666666666666666653 233 5666666666666666664443 66
Q ss_pred CCCCCCceecCCCeeeecCCccccccCccceeeccCCCCcCCCcccccCCCCCcCEEEccCCccccccCcccccCCCCcE
Q 002021 198 NLRNLEKLDIGDNKLVGIAPIAIFNVSTLKILGLQDNSLSGCLSSIGYARLPNLEILSLWGNNFSGTIPRFIFNASKLSI 277 (979)
Q Consensus 198 ~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~ 277 (979)
++++|++|++++|+++++.+ +.++++|++|++++|.+++.. .+..+++|++|+++ |.+.
T Consensus 110 ~l~~L~~L~L~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~~---~~~~l~~L~~L~l~-~~~~--------------- 168 (466)
T 1o6v_A 110 NLTNLTGLTLFNNQITDIDP--LKNLTNLNRLELSSNTISDIS---ALSGLTSLQQLSFG-NQVT--------------- 168 (466)
T ss_dssp TCTTCCEEECCSSCCCCCGG--GTTCTTCSEEEEEEEEECCCG---GGTTCTTCSEEEEE-ESCC---------------
T ss_pred CCCCCCEEECCCCCCCCChH--HcCCCCCCEEECCCCccCCCh---hhccCCcccEeecC-Cccc---------------
Confidence 66666666666666665533 455555555555555554422 13444444444443 2222
Q ss_pred EeccccccccccCccccccccccceeccccccccccchhhhhhcccCCCCccEEEccCCCCcccCCccccccccccccEE
Q 002021 278 LDLEGNSFSGFIPNTFGNLRNLSWLVLSDNYLTSSTQELSFLSSLSNCKFLKYFDLSYNPLYRILPRTTVGNLSHSLEEF 357 (979)
Q Consensus 278 L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~~L~~L 357 (979)
+..+ +.++++|++|++++|.++..+ .+..+++|++|++++|.+.++.+ ++ ..++|++|
T Consensus 169 ---------~~~~--~~~l~~L~~L~l~~n~l~~~~-------~l~~l~~L~~L~l~~n~l~~~~~---~~-~l~~L~~L 226 (466)
T 1o6v_A 169 ---------DLKP--LANLTTLERLDISSNKVSDIS-------VLAKLTNLESLIATNNQISDITP---LG-ILTNLDEL 226 (466)
T ss_dssp ---------CCGG--GTTCTTCCEEECCSSCCCCCG-------GGGGCTTCSEEECCSSCCCCCGG---GG-GCTTCCEE
T ss_pred ---------Cchh--hccCCCCCEEECcCCcCCCCh-------hhccCCCCCEEEecCCccccccc---cc-ccCCCCEE
Confidence 2211 444444444444444443321 13334444444444444433322 00 01233333
Q ss_pred EccCccccCCCCccccCCCcccEEEecCCCCCchhHHhhhcCCCCcEEEecCcccCCCccccccCCCCCceEecCCCccc
Q 002021 358 KMSNCNISGGIPEEISNLTNLRTIYLGGNKLNGSILITLSKLQKLQDLGLKDNKLEGSIPYDICNLAELYRLDLDGNKLS 437 (979)
Q Consensus 358 ~L~~n~i~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~ 437 (979)
++++|++++. +.+..+++|++|++++|.+++..+ +..+++|+.|++++|.+.+..+ +..+++|+.|++++|++.
T Consensus 227 ~l~~n~l~~~--~~l~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~L~~n~l~ 300 (466)
T 1o6v_A 227 SLNGNQLKDI--GTLASLTNLTDLDLANNQISNLAP--LSGLTKLTELKLGANQISNISP--LAGLTALTNLELNENQLE 300 (466)
T ss_dssp ECCSSCCCCC--GGGGGCTTCSEEECCSSCCCCCGG--GTTCTTCSEEECCSSCCCCCGG--GTTCTTCSEEECCSSCCS
T ss_pred ECCCCCcccc--hhhhcCCCCCEEECCCCccccchh--hhcCCCCCEEECCCCccCcccc--ccCCCccCeEEcCCCccc
Confidence 3333333321 234445555555555555544333 4444455555555554443222 444444555555555544
Q ss_pred ccCCccccCCCcCceEecCCCccccccccccCcCCCcEEEeccccccCCCccccccccccceEeccCCccCcccchhhcC
Q 002021 438 GSIPACFSNLTSLRIVSLGSNELTSIPLTFWNLKDILNLNFSSNFLTGSLPLEIGSLKVLVGIDLSRNNFSGVIPTEIGG 517 (979)
Q Consensus 438 ~~~~~~~~~l~~L~~L~L~~N~l~~lp~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~ 517 (979)
+..+ +..+++|+.|++++|+++.++. +..+++|+.|++++|++++. ..+..+++|+.|++++|++++..| +..
T Consensus 301 ~~~~--~~~l~~L~~L~L~~n~l~~~~~-~~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~l~~n~l~~~~~--~~~ 373 (466)
T 1o6v_A 301 DISP--ISNLKNLTYLTLYFNNISDISP-VSSLTKLQRLFFYNNKVSDV--SSLANLTNINWLSAGHNQISDLTP--LAN 373 (466)
T ss_dssp CCGG--GGGCTTCSEEECCSSCCSCCGG-GGGCTTCCEEECCSSCCCCC--GGGTTCTTCCEEECCSSCCCBCGG--GTT
T ss_pred Cchh--hcCCCCCCEEECcCCcCCCchh-hccCccCCEeECCCCccCCc--hhhccCCCCCEEeCCCCccCccch--hhc
Confidence 3322 4444444444444444444332 33444444444444444432 234444444444444444444433 444
Q ss_pred CcccceeecCCcccc
Q 002021 518 LKNLEYLFLGYNRLQ 532 (979)
Q Consensus 518 l~~L~~L~Ls~N~l~ 532 (979)
+++|+.|++++|+++
T Consensus 374 l~~L~~L~l~~n~~~ 388 (466)
T 1o6v_A 374 LTRITQLGLNDQAWT 388 (466)
T ss_dssp CTTCCEEECCCEEEE
T ss_pred CCCCCEEeccCCccc
Confidence 444444444444444
No 95
>3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=3.4e-39 Score=360.08 Aligned_cols=274 Identities=26% Similarity=0.358 Sum_probs=208.8
Q ss_pred cHHHHHHhhCCCCCCceeeeecceEEEEEEcCCCcEEEEEEeccccccchhcHHHHHHHHHhc--CCCCeeeEEEeeccC
Q 002021 673 SYLELCRATDGFSENNLIGRGGFGSVYKASLGDGMEVAVKVFTSQCGRAFKSFDVECEIMKSI--RHRNLIKVISSCSNE 750 (979)
Q Consensus 673 ~~~~~~~~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l--~h~niv~l~~~~~~~ 750 (979)
+........++|+..+.||+|+||.||+|+.. ++.||||++... ....+.+|.+++... +||||+++++++.+.
T Consensus 28 ~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~---~~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~ 103 (337)
T 3mdy_A 28 PLLVQRTIAKQIQMVKQIGKGRYGEVWMGKWR-GEKVAVKVFFTT---EEASWFRETEIYQTVLMRHENILGFIAADIKG 103 (337)
T ss_dssp CHHHHTTHHHHCEEEEEEEEETTEEEEEEEET-TEEEEEEEEEGG---GHHHHHHHHHHHTSTTCCCTTBCCEEEEEEES
T ss_pred CcccccccccceEEEeEeecCCCeEEEEEEEC-CceEEEEEEecc---ccchhhhHHHHHHHHhhcCCCeeeEEEEEccC
Confidence 33344445578999999999999999999874 899999998643 224455566666654 899999999998776
Q ss_pred ----CeeEEEEEecCCCccceeeccCCCCCCHHHHHHHHHHHHHHHHHHhcCCCC--------CeEecCCCCCCEEeCCC
Q 002021 751 ----EFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGYSA--------PVIHCDLKPSNVLLDDN 818 (979)
Q Consensus 751 ----~~~~lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~--------~i~H~Dik~~NIll~~~ 818 (979)
...++||||+++|+|.+++... .+++..++.++.|++.||+||| ++ +|+||||||+||+++.+
T Consensus 104 ~~~~~~~~lv~e~~~~g~L~~~l~~~--~~~~~~~~~i~~~i~~~l~~lH---~~~~~~~~~~~ivH~Dikp~Nill~~~ 178 (337)
T 3mdy_A 104 TGSWTQLYLITDYHENGSLYDYLKST--TLDAKSMLKLAYSSVSGLCHLH---TEIFSTQGKPAIAHRDLKSKNILVKKN 178 (337)
T ss_dssp CGGGCEEEEEECCCTTCBHHHHHHHC--CBCHHHHHHHHHHHHHHHHHHH---SCBCSTTCBCCEECSCCCGGGEEECTT
T ss_pred CCCCCceEEEEeccCCCcHHHHhhcc--CCCHHHHHHHHHHHHHHHHHHH---HhhhhhccCCCEEecccchHHEEECCC
Confidence 6889999999999999999765 5899999999999999999999 77 99999999999999999
Q ss_pred CcEEEEeeccccccCCCCCcc--eecccccCCCCCCccccCCCCCCCc------hhHHHHHHHHHHHHcCC---------
Q 002021 819 MVAHLSDFSIAKMLTGEDQSM--IQTQTLATIGYMAPEYGREGRVSAN------GDVYSFGIMLMETFTGK--------- 881 (979)
Q Consensus 819 ~~~kl~Dfg~~~~~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~------~DvwslG~il~el~tg~--------- 881 (979)
+.+||+|||++.......... ......||+.|+|||++.+..++.+ +|||||||++|||+||+
T Consensus 179 ~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~tg~~~~~~~~~~ 258 (337)
T 3mdy_A 179 GTCCIADLGLAVKFISDTNEVDIPPNTRVGTKRYMPPEVLDESLNRNHFQSYIMADMYSFGLILWEVARRCVSGGIVEEY 258 (337)
T ss_dssp SCEEECCCTTCEECC---------CCSSCSCGGGCCHHHHTTCCCTTCTHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCC
T ss_pred CCEEEEeCCCceeeccccccccCCCCCCccCcceeChhhcccccCCccccCccccchHHHHHHHHHHHhccCcccccccc
Confidence 999999999997664332221 1234579999999999887766654 99999999999999994
Q ss_pred -CCCcccccCcchHhHhhhhhcCCccchhhcccccCchhhhhHHHHHHHHHHHHHHHhccccCcCCCCCHHHHHHHHHHh
Q 002021 882 -KPTDEIFNGEMTLKHWVNDWLPISTMEVVDANLLSQEDIHFVAKEQCVSFVFNLAMECTMEFPKQRINAKEIVTKLLKI 960 (979)
Q Consensus 882 -~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~eil~~L~~~ 960 (979)
.||............+...... ...............++.++.+++.+||+.||++|||+.|++++|+++
T Consensus 259 ~~p~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~l 329 (337)
T 3mdy_A 259 QLPYHDLVPSDPSYEDMREIVCI---------KKLRPSFPNRWSSDECLRQMGKLMTECWAHNPASRLTALRVKKTLAKM 329 (337)
T ss_dssp CCTTTTTSCSSCCHHHHHHHHTT---------SCCCCCCCGGGGGSHHHHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHH
T ss_pred cccHhhhcCCCCchhhhHHHHhh---------hccCccccccchhhHHHHHHHHHHHHhhhhChhhCCCHHHHHHHHHHH
Confidence 4544333222222221111111 111111111222346788899999999999999999999999999999
Q ss_pred HHhh
Q 002021 961 RDSL 964 (979)
Q Consensus 961 ~~~~ 964 (979)
.++.
T Consensus 330 ~~~~ 333 (337)
T 3mdy_A 330 SESQ 333 (337)
T ss_dssp HHTT
T ss_pred Hhhc
Confidence 8754
No 96
>1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7
Probab=100.00 E-value=9.3e-40 Score=369.04 Aligned_cols=253 Identities=19% Similarity=0.261 Sum_probs=208.4
Q ss_pred hCCCCCCceeeeecceEEEEEE-cCCCcEEEEEEeccccccchhcHHHHHHHHHhcCCCCeeeEEEeeccCCeeEEEEEe
Q 002021 681 TDGFSENNLIGRGGFGSVYKAS-LGDGMEVAVKVFTSQCGRAFKSFDVECEIMKSIRHRNLIKVISSCSNEEFKALVLEY 759 (979)
Q Consensus 681 ~~~~~~~~~lG~G~~g~Vy~~~-~~~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~E~ 759 (979)
.+.|+..+.||+|+||.||+|. ..+|+.||+|++..........+.+|+++++.++||||+++++++.+++..++||||
T Consensus 50 ~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~lv~E~ 129 (387)
T 1kob_A 50 YDYYDILEELGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKYTVKNEISIMNQLHHPKLINLHDAFEDKYEMVLILEF 129 (387)
T ss_dssp GGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHTTCCSTTBCCEEEEEECSSEEEEEEEC
T ss_pred ccceEEEEEEecCCCEEEEEEEECCCCCEEEEEEecccchhhHHHHHHHHHHHHhCCCcCCCeEEEEEEeCCEEEEEEEc
Confidence 4678999999999999999995 457899999998765444556788999999999999999999999999999999999
Q ss_pred cCCCccceeeccCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCEEeCC--CCcEEEEeeccccccCCCCC
Q 002021 760 MPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDD--NMVAHLSDFSIAKMLTGEDQ 837 (979)
Q Consensus 760 ~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~i~H~Dik~~NIll~~--~~~~kl~Dfg~~~~~~~~~~ 837 (979)
+++|+|.+++......+++.+++.++.|++.||+||| +++|+||||||+||+++. ++.+||+|||++........
T Consensus 130 ~~gg~L~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LH---~~givHrDlkp~NIll~~~~~~~vkL~DFG~a~~~~~~~~ 206 (387)
T 1kob_A 130 LSGGELFDRIAAEDYKMSEAEVINYMRQACEGLKHMH---EHSIVHLDIKPENIMCETKKASSVKIIDFGLATKLNPDEI 206 (387)
T ss_dssp CCCCBHHHHTTCTTCCBCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEESSTTCCCEEECCCTTCEECCTTSC
T ss_pred CCCCcHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHH---hCCeeecccchHHeEEecCCCCceEEEecccceecCCCcc
Confidence 9999999999877667999999999999999999999 999999999999999984 57899999999987643322
Q ss_pred cceecccccCCCCCCccccCCCCCCCchhHHHHHHHHHHHHcCCCCCcccccCcchHhHhhhhhcCCccchhhcccccCc
Q 002021 838 SMIQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFTGKKPTDEIFNGEMTLKHWVNDWLPISTMEVVDANLLSQ 917 (979)
Q Consensus 838 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 917 (979)
.....||+.|+|||++.+..++.++||||+||++|||++|+.||...... ............
T Consensus 207 ---~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~~~~~-~~~~~i~~~~~~-------------- 268 (387)
T 1kob_A 207 ---VKVTTATAEFAAPEIVDREPVGFYTDMWAIGVLGYVLLSGLSPFAGEDDL-ETLQNVKRCDWE-------------- 268 (387)
T ss_dssp ---EEEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCSSHH-HHHHHHHHCCCC--------------
T ss_pred ---eeeeccCCCccCchhccCCCCCCcccEeeHhHHHHHHHhCCCCCCCCCHH-HHHHHHHhCCCC--------------
Confidence 23457899999999999889999999999999999999999999753211 111111100000
Q ss_pred hhhhhHHHHHHHHHHHHHHHhccccCcCCCCCHHHHHHH
Q 002021 918 EDIHFVAKEQCVSFVFNLAMECTMEFPKQRINAKEIVTK 956 (979)
Q Consensus 918 ~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~eil~~ 956 (979)
........+++++.+++.+||+.||++|||+.|+++|
T Consensus 269 --~~~~~~~~~s~~~~~li~~~L~~dP~~Rpt~~ell~h 305 (387)
T 1kob_A 269 --FDEDAFSSVSPEAKDFIKNLLQKEPRKRLTVHDALEH 305 (387)
T ss_dssp --CCSSTTTTSCHHHHHHHHTTSCSSGGGSCCHHHHHTS
T ss_pred --CCccccccCCHHHHHHHHHHcCCChhHCcCHHHHhhC
Confidence 0000112345678999999999999999999999986
No 97
>3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A*
Probab=100.00 E-value=4.4e-40 Score=364.90 Aligned_cols=258 Identities=23% Similarity=0.397 Sum_probs=207.6
Q ss_pred CCCCCCceeeeecceEEEEEEc-CCCcE----EEEEEecccc-ccchhcHHHHHHHHHhcCCCCeeeEEEeeccCCeeEE
Q 002021 682 DGFSENNLIGRGGFGSVYKASL-GDGME----VAVKVFTSQC-GRAFKSFDVECEIMKSIRHRNLIKVISSCSNEEFKAL 755 (979)
Q Consensus 682 ~~~~~~~~lG~G~~g~Vy~~~~-~~~~~----vAvK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 755 (979)
++|+..+.||+|+||.||+|.. .+++. ||+|++.... ....+.+.+|+.+++.++||||+++++++. ++..++
T Consensus 13 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-~~~~~~ 91 (325)
T 3kex_A 13 TELRKLKVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAHIVRLLGLCP-GSSLQL 91 (325)
T ss_dssp TTEEEEEEEECCSSCEEEEEEECCTTCSCCEEEEEEEECCTTSCSCBCSCCHHHHHHHTCCCTTBCCEEEEEC-BSSEEE
T ss_pred hHceeeeeeeecCCceEEEEEEcCCCceEEEEEEEEeccccccHHHHHHHHHHHHHHhcCCCCCcCeEEEEEc-CCccEE
Confidence 5688889999999999999964 44543 7888775443 334567788999999999999999999986 456889
Q ss_pred EEEecCCCccceeeccCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCEEeCCCCcEEEEeeccccccCCC
Q 002021 756 VLEYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFSIAKMLTGE 835 (979)
Q Consensus 756 v~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~i~H~Dik~~NIll~~~~~~kl~Dfg~~~~~~~~ 835 (979)
||||+++|+|.+++......+++..++.++.|++.||+||| +++|+||||||+||+++.++.+||+|||+++.....
T Consensus 92 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH---~~~ivH~Dikp~Nil~~~~~~~kl~Dfg~a~~~~~~ 168 (325)
T 3kex_A 92 VTQYLPLGSLLDHVRQHRGALGPQLLLNWGVQIAKGMYYLE---EHGMVHRNLAARNVLLKSPSQVQVADFGVADLLPPD 168 (325)
T ss_dssp EEECCTTCBSHHHHHSSGGGSCTTHHHHHHHHHHHHHHHHH---HTTCCCSCCSSTTEEESSSSCEEECSCSGGGGSCCC
T ss_pred EEEeCCCCCHHHHHHHccccCCHHHHHHHHHHHHHHHHHHH---hCCCCCCccchheEEECCCCeEEECCCCcccccCcc
Confidence 99999999999999887668999999999999999999999 999999999999999999999999999999987655
Q ss_pred CCcceecccccCCCCCCccccCCCCCCCchhHHHHHHHHHHHHc-CCCCCcccccCcchHhHhhhhhcCCccchhhcccc
Q 002021 836 DQSMIQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFT-GKKPTDEIFNGEMTLKHWVNDWLPISTMEVVDANL 914 (979)
Q Consensus 836 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~t-g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 914 (979)
..........+|..|+|||.+.++.++.++||||+|+++|||+| |+.||......+ ....+....
T Consensus 169 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~--~~~~~~~~~------------ 234 (325)
T 3kex_A 169 DKQLLYSEAKTPIKWMALESIHFGKYTHQSDVWSYGVTVWELMTFGAEPYAGLRLAE--VPDLLEKGE------------ 234 (325)
T ss_dssp TTCCC-----CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTSCTTH--HHHHHHTTC------------
T ss_pred cccccccCCCCcccccChHHhccCCCChhhHhHHhHHHHHHHHhCCCCCccccCHHH--HHHHHHcCC------------
Confidence 44444455678889999999998899999999999999999999 999997633221 111111100
Q ss_pred cCchhhhhHHHHHHHHHHHHHHHhccccCcCCCCCHHHHHHHHHHhHHh
Q 002021 915 LSQEDIHFVAKEQCVSFVFNLAMECTMEFPKQRINAKEIVTKLLKIRDS 963 (979)
Q Consensus 915 ~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~eil~~L~~~~~~ 963 (979)
....+..++.++.+++.+||..||++|||+.|++++|+++...
T Consensus 235 ------~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~el~~~l~~~~~~ 277 (325)
T 3kex_A 235 ------RLAQPQICTIDVYMVMVKCWMIDENIRPTFKELANEFTRMARD 277 (325)
T ss_dssp ------BCCCCTTBCTTTTHHHHHHTCSCTTTSCCHHHHHHHHHHHTTS
T ss_pred ------CCCCCCcCcHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhc
Confidence 0001112344578899999999999999999999999998754
No 98
>3uzp_A CKI-delta, CKID, casein kinase I isoform delta; CK1D, inhibitor, PF670462, transferase-transferase I complex; HET: 0CK; 1.94A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 1cki_A 1ckj_A
Probab=100.00 E-value=3e-39 Score=353.41 Aligned_cols=276 Identities=19% Similarity=0.198 Sum_probs=223.8
Q ss_pred hCCCCCCceeeeecceEEEEEE-cCCCcEEEEEEeccccccchhcHHHHHHHHHhcCCCCeeeEEEee-ccCCeeEEEEE
Q 002021 681 TDGFSENNLIGRGGFGSVYKAS-LGDGMEVAVKVFTSQCGRAFKSFDVECEIMKSIRHRNLIKVISSC-SNEEFKALVLE 758 (979)
Q Consensus 681 ~~~~~~~~~lG~G~~g~Vy~~~-~~~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~-~~~~~~~lv~E 758 (979)
.++|+..+.||+|+||.||+|. ..+++.||||++.... ..+.+.+|+++++.++|+++++.+.++ .+.+..++|||
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~e 85 (296)
T 3uzp_A 8 GNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKT--KHPQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVMVME 85 (296)
T ss_dssp TTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEEESCS--SCCHHHHHHHHHHHHTTSTTCCCEEEEEEETTEEEEEEE
T ss_pred ccEEEEEEEEccCCCeEEEEEEEcCCCcEEEEEEecCCc--chhHHHHHHHHHHHhhcCCCCCccccccCCCCceEEEEE
Confidence 4678999999999999999996 4689999999986542 345688999999999998877766655 66778899999
Q ss_pred ecCCCccceeeccCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCEEe---CCCCcEEEEeeccccccCCC
Q 002021 759 YMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLL---DDNMVAHLSDFSIAKMLTGE 835 (979)
Q Consensus 759 ~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~i~H~Dik~~NIll---~~~~~~kl~Dfg~~~~~~~~ 835 (979)
|+ +++|.+++......+++.+++.++.|++.||+||| +++|+||||||+||++ ++++.+||+|||++......
T Consensus 86 ~~-~~~L~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH---~~~ivH~dlkp~NIl~~~~~~~~~~kl~Dfg~~~~~~~~ 161 (296)
T 3uzp_A 86 LL-GPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIH---SKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDA 161 (296)
T ss_dssp CC-CCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCCGGGEEECCGGGTTCEEECCCTTCEECBCT
T ss_pred ec-CCCHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHH---hCCeeeCCCCHHHeEEecCCCCCeEEEeeCCCccccccc
Confidence 99 89999999866667999999999999999999999 9999999999999999 48889999999999876543
Q ss_pred CCc-----ceecccccCCCCCCccccCCCCCCCchhHHHHHHHHHHHHcCCCCCcccccCc--chHhHhhhhhcCCccch
Q 002021 836 DQS-----MIQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFTGKKPTDEIFNGE--MTLKHWVNDWLPISTME 908 (979)
Q Consensus 836 ~~~-----~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~tg~~P~~~~~~~~--~~~~~~~~~~~~~~~~~ 908 (979)
... .......||+.|+|||.+.+..+++++||||+||++|||++|+.||....... ..+.......
T Consensus 162 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~------- 234 (296)
T 3uzp_A 162 RTHQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKK------- 234 (296)
T ss_dssp TTCCBCCCCCSCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSSSSHHHHHHHHH-------
T ss_pred ccccccccccccccccccccCChhhhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCcCchhhhhhhhhhcccc-------
Confidence 221 11244578999999999999899999999999999999999999997643221 1111110000
Q ss_pred hhcccccCchhhhhHHHHHHHHHHHHHHHhccccCcCCCCCHHHHHHHHHHhHHhhccCCCCcceeccC
Q 002021 909 VVDANLLSQEDIHFVAKEQCVSFVFNLAMECTMEFPKQRINAKEIVTKLLKIRDSLLRNVGGRCVRQSN 977 (979)
Q Consensus 909 ~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~eil~~L~~~~~~~~~~~~~~~~~~~~ 977 (979)
... ........+++++.+++.+||+.||++|||+.|+++.|+++............+|+.+
T Consensus 235 -----~~~---~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~~~~~~~~~~~~~dw~~~ 295 (296)
T 3uzp_A 235 -----MST---PIEVLCKGYPSEFATYLNFCRSLRFDDKPDYSYLRQLFRNLFHRQGFSYDYVFDWNML 295 (296)
T ss_dssp -----HHS---CHHHHTTTSCHHHHHHHHHHHTSCTTCCCCHHHHHHHHHHHHHHTTCCSSCCCGGGGC
T ss_pred -----cCC---chHHHHhhCCHHHHHHHHHHHhcCcCcCCCHHHHHHHHHHHHHhcCCccccccccccc
Confidence 000 0001113456779999999999999999999999999999999999999999999864
No 99
>4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens}
Probab=100.00 E-value=2.5e-39 Score=357.99 Aligned_cols=273 Identities=19% Similarity=0.278 Sum_probs=210.2
Q ss_pred CCCCCCceeeeecceEEEEEEc-CCCcEEEEEEecccc-ccchhcHHHHHHHHHhcCCCCeeeEEEeeccCC--eeEEEE
Q 002021 682 DGFSENNLIGRGGFGSVYKASL-GDGMEVAVKVFTSQC-GRAFKSFDVECEIMKSIRHRNLIKVISSCSNEE--FKALVL 757 (979)
Q Consensus 682 ~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vAvK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~--~~~lv~ 757 (979)
+.|+..+.||+|+||.||+|.. .+++.||||++.... ....+.+.+|++++++++||||+++++++.... ..++||
T Consensus 9 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~ 88 (319)
T 4euu_A 9 HLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFAIEEETTTRHKVLIM 88 (319)
T ss_dssp EEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECGGGGGSCHHHHHHHHHHHHHCCCTTBCCEEEEEECTTTCCEEEEE
T ss_pred CCEEEEEEecCCCCeEEEEEEECCCCcEEEEEEeccccccchHHHHHHHHHHHHhcCCCCcceEEEEeecCCCceEEEEE
Confidence 5688899999999999999954 468999999987543 234567789999999999999999999987654 779999
Q ss_pred EecCCCccceeeccCCC--CCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCEEe----CCCCcEEEEeeccccc
Q 002021 758 EYMPHGSLEKYLYSSNC--ILDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLL----DDNMVAHLSDFSIAKM 831 (979)
Q Consensus 758 E~~~~g~L~~~l~~~~~--~l~~~~~~~i~~~ia~~L~~LH~~~~~~i~H~Dik~~NIll----~~~~~~kl~Dfg~~~~ 831 (979)
||+++++|.+++..... .+++.+++.++.|++.||+||| +++|+||||||+||++ +.++.+||+|||+++.
T Consensus 89 e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~qi~~~L~~LH---~~~ivH~Dlkp~NIll~~~~~~~~~~kL~Dfg~a~~ 165 (319)
T 4euu_A 89 EFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLR---ENGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARE 165 (319)
T ss_dssp ECCTTCBHHHHHHSGGGTTCCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEEEECTTSCEEEEECCCTTCEE
T ss_pred eCCCCCCHHHHHHHhccccCCCHHHHHHHHHHHHHHHHHHH---HCCEecCCCCHHHEEEeccCCCCceEEEccCCCcee
Confidence 99999999999976532 3899999999999999999999 9999999999999999 7888999999999987
Q ss_pred cCCCCCcceecccccCCCCCCccccC--------CCCCCCchhHHHHHHHHHHHHcCCCCCcccccCcch---HhHhhhh
Q 002021 832 LTGEDQSMIQTQTLATIGYMAPEYGR--------EGRVSANGDVYSFGIMLMETFTGKKPTDEIFNGEMT---LKHWVND 900 (979)
Q Consensus 832 ~~~~~~~~~~~~~~gt~~y~aPE~~~--------~~~~~~~~DvwslG~il~el~tg~~P~~~~~~~~~~---~~~~~~~ 900 (979)
...... .....||+.|+|||++. +..++.++||||+||++|||++|+.||......... .......
T Consensus 166 ~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~ 242 (319)
T 4euu_A 166 LEDDEQ---FVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRRNKEVMYKIITG 242 (319)
T ss_dssp CCTTCC---BCCCCSCGGGCCHHHHHHHTSCCCCCCCBCTTHHHHHHHHHHHHHHHSSCSEECTTCGGGCHHHHHHHHHH
T ss_pred cCCCCc---eeecccCCCccCHHHhhhccccccccCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCccchhHHHHHHHhcC
Confidence 643322 23456899999999875 467899999999999999999999999754332221 1122221
Q ss_pred hcCCccchhhccc-----ccCchhhhhHHHHHHHHHHHHHHHhccccCcCCCCCHHHHHHHHHHh
Q 002021 901 WLPISTMEVVDAN-----LLSQEDIHFVAKEQCVSFVFNLAMECTMEFPKQRINAKEIVTKLLKI 960 (979)
Q Consensus 901 ~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~eil~~L~~~ 960 (979)
..+.....+.... ...............+..+.+++.+|++.||++|||++|+++|..+.
T Consensus 243 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~~R~s~~ell~h~~d~ 307 (319)
T 4euu_A 243 KPSGAISGVQKAENGPIDWSGDMPVSCSLSRGLQVLLTPVLANILEADQEKCWGFDQFFAETSDI 307 (319)
T ss_dssp CCTTCCEEEECSTTCCEEEESSCCTTCSSCHHHHHHHHHHHHHHSCCCTTTSCCHHHHHHHHHHH
T ss_pred CCcccchhhhcccCCccccCccCCcccccchhHHHHhHHHHHHhccCChhhhccHHHhhhccHHH
Confidence 1111111100000 00000011112245667899999999999999999999999998854
No 100
>3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A
Probab=100.00 E-value=9.2e-40 Score=365.90 Aligned_cols=252 Identities=21% Similarity=0.301 Sum_probs=204.9
Q ss_pred CCCCCCceeeeecceEEEEEE-cCCCcEEEEEEecccc-----ccchhcHHHHHHHHHhcCCCCeeeEEEeeccCCeeEE
Q 002021 682 DGFSENNLIGRGGFGSVYKAS-LGDGMEVAVKVFTSQC-----GRAFKSFDVECEIMKSIRHRNLIKVISSCSNEEFKAL 755 (979)
Q Consensus 682 ~~~~~~~~lG~G~~g~Vy~~~-~~~~~~vAvK~~~~~~-----~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 755 (979)
+.|+..+.||+|+||.||+|. ..+|+.||||++.... ....+.+.+|+++++.++||||+++++++.+++..++
T Consensus 24 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~l 103 (351)
T 3c0i_A 24 DVYELCEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVELLETYSSDGMLYM 103 (351)
T ss_dssp HHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHTSSSCCHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEE
T ss_pred cceEEeeEEeeCCCEEEEEEEECCCCCEEEEEEEEhhhccccccchHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEEE
Confidence 468889999999999999995 4679999999986431 1235678999999999999999999999999999999
Q ss_pred EEEecCCCccceeeccC---CCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCEEeCCCCc---EEEEeeccc
Q 002021 756 VLEYMPHGSLEKYLYSS---NCILDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMV---AHLSDFSIA 829 (979)
Q Consensus 756 v~E~~~~g~L~~~l~~~---~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~i~H~Dik~~NIll~~~~~---~kl~Dfg~~ 829 (979)
||||+++|+|.+++... ...+++..+..++.||+.||+||| +++|+||||||+||+++.++. +||+|||++
T Consensus 104 v~e~~~g~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~al~~lH---~~~ivHrDlkp~NIl~~~~~~~~~vkl~Dfg~a 180 (351)
T 3c0i_A 104 VFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRYCH---DNNIIHRDVKPHCVLLASKENSAPVKLGGFGVA 180 (351)
T ss_dssp EEECCSSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECSSSTTCCEEECCCTTC
T ss_pred EEeCCCCCCHHHHHHHhcccCCCCCHHHHHHHHHHHHHHHHHHH---HCCceeccCChHHeEEecCCCCCcEEEecCcce
Confidence 99999999998887543 335899999999999999999999 999999999999999986654 999999999
Q ss_pred cccCCCCCcceecccccCCCCCCccccCCCCCCCchhHHHHHHHHHHHHcCCCCCcccccCcchHhHhhhhhcCCccchh
Q 002021 830 KMLTGEDQSMIQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFTGKKPTDEIFNGEMTLKHWVNDWLPISTMEV 909 (979)
Q Consensus 830 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~ 909 (979)
....... .......||+.|+|||++.+..++.++||||+||++|||++|+.||.... +..........
T Consensus 181 ~~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~--~~~~~~i~~~~-------- 248 (351)
T 3c0i_A 181 IQLGESG--LVAGGRVGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSGCLPFYGTK--ERLFEGIIKGK-------- 248 (351)
T ss_dssp EECCTTS--CBCCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCSSH--HHHHHHHHHTC--------
T ss_pred eEecCCC--eeecCCcCCcCccCHHHHcCCCCCchHhhHHHHHHHHHHHHCCCCCCCcH--HHHHHHHHcCC--------
Confidence 8764332 22345679999999999998899999999999999999999999997521 11111111000
Q ss_pred hcccccCchhhhhHHHHHHHHHHHHHHHhccccCcCCCCCHHHHHHH
Q 002021 910 VDANLLSQEDIHFVAKEQCVSFVFNLAMECTMEFPKQRINAKEIVTK 956 (979)
Q Consensus 910 ~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~eil~~ 956 (979)
..........++.++.+++.+||+.||++|||+.|+++|
T Consensus 249 --------~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~s~~e~l~h 287 (351)
T 3c0i_A 249 --------YKMNPRQWSHISESAKDLVRRMLMLDPAERITVYEALNH 287 (351)
T ss_dssp --------CCCCHHHHTTSCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred --------CCCCccccccCCHHHHHHHHHHCCCChhHCcCHHHHhcC
Confidence 001112223456779999999999999999999999875
No 101
>3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens}
Probab=100.00 E-value=1.2e-39 Score=374.54 Aligned_cols=254 Identities=21% Similarity=0.294 Sum_probs=205.8
Q ss_pred hhCCCCCCceeeeecceEEEEE-EcCCCcEEEEEEecccc--ccchhcHHHHHHHHHhcCCCCeeeEEEeeccCCeeEEE
Q 002021 680 ATDGFSENNLIGRGGFGSVYKA-SLGDGMEVAVKVFTSQC--GRAFKSFDVECEIMKSIRHRNLIKVISSCSNEEFKALV 756 (979)
Q Consensus 680 ~~~~~~~~~~lG~G~~g~Vy~~-~~~~~~~vAvK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 756 (979)
..++|+..+.||+|+||.||+| ...+|+.||+|++.... ....+.+.+|+++++.++||||+++++++.+++..++|
T Consensus 9 ~~~~Y~i~~~LG~G~fg~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lv 88 (444)
T 3soa_A 9 FTEEYQLFEELGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDSISEEGHHYLI 88 (444)
T ss_dssp HHHHEEEEEEEEEC--CEEEEEEETTTTEEEEEEEEESCSCHHHHHHHHHHHHHHHHHCCBTTBCCEEEEEECSSEEEEE
T ss_pred ccCCeEEEEEeccCCCeEEEEEEECCCCcEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCcCCCeEEEEEEECCEEEEE
Confidence 4567889999999999999999 45689999999986543 23346688999999999999999999999999999999
Q ss_pred EEecCCCccceeeccCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCEEeC---CCCcEEEEeeccccccC
Q 002021 757 LEYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLD---DNMVAHLSDFSIAKMLT 833 (979)
Q Consensus 757 ~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~i~H~Dik~~NIll~---~~~~~kl~Dfg~~~~~~ 833 (979)
|||+++|+|.+++...+ .+++.++..++.||+.|++||| +++|+||||||+||+++ .++.+||+|||++....
T Consensus 89 ~E~~~gg~L~~~i~~~~-~~~e~~~~~i~~qil~aL~~lH---~~givHrDlKp~NIll~~~~~~~~vkL~DFG~a~~~~ 164 (444)
T 3soa_A 89 FDLVTGGELFEDIVARE-YYSEADASHCIQQILEAVLHCH---QMGVVHRNLKPENLLLASKLKGAAVKLADFGLAIEVE 164 (444)
T ss_dssp ECCCBCCBHHHHHHHCS-CCCHHHHHHHHHHHHHHHHHHH---HTTCBCCCCSSTTEEESBSSTTCCEEECCCSSCBCCC
T ss_pred EEeCCCCCHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHH---HCCccccCCCHHHEEEeccCCCCcEEEccCceeEEec
Confidence 99999999999887654 6899999999999999999999 99999999999999998 46789999999998764
Q ss_pred CCCCcceecccccCCCCCCccccCCCCCCCchhHHHHHHHHHHHHcCCCCCcccccCcchHhHhhhhhcCCccchhhccc
Q 002021 834 GEDQSMIQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFTGKKPTDEIFNGEMTLKHWVNDWLPISTMEVVDAN 913 (979)
Q Consensus 834 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 913 (979)
.... ......||+.|+|||++.+..+++++||||+||++|+|++|+.||......+ ...........
T Consensus 165 ~~~~--~~~~~~gt~~Y~APE~l~~~~~~~~~DIwSlGvilyell~G~~Pf~~~~~~~-~~~~i~~~~~~---------- 231 (444)
T 3soa_A 165 GEQQ--AWFGFAGTPGYLSPEVLRKDPYGKPVDLWACGVILYILLVGYPPFWDEDQHR-LYQQIKAGAYD---------- 231 (444)
T ss_dssp TTCC--BCCCSCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSCCCSSHHH-HHHHHHHTCCC----------
T ss_pred CCCc--eeecccCCcccCCHHHhcCCCCCCccccHHHHHHHHHHHhCCCCCCCccHHH-HHHHHHhCCCC----------
Confidence 3322 2245679999999999998899999999999999999999999996522111 11111110000
Q ss_pred ccCchhhhhHHHHHHHHHHHHHHHhccccCcCCCCCHHHHHHH
Q 002021 914 LLSQEDIHFVAKEQCVSFVFNLAMECTMEFPKQRINAKEIVTK 956 (979)
Q Consensus 914 ~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~eil~~ 956 (979)
...+....+++++.+++.+|++.||++|||+.|+++|
T Consensus 232 ------~~~~~~~~~s~~~~~li~~~L~~dP~~Rpta~e~L~h 268 (444)
T 3soa_A 232 ------FPSPEWDTVTPEAKDLINKMLTINPSKRITAAEALKH 268 (444)
T ss_dssp ------CCTTTTTTSCHHHHHHHHHHSCSSTTTSCCHHHHHHS
T ss_pred ------CCccccccCCHHHHHHHHHHcCCChhHCCCHHHHhcC
Confidence 0011122456679999999999999999999999986
No 102
>1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A
Probab=100.00 E-value=1.2e-39 Score=355.07 Aligned_cols=268 Identities=22% Similarity=0.270 Sum_probs=203.4
Q ss_pred CCCCCCceeeeecceEEEEEEcCCCcEEEEEEecccc--ccchhcHHHHHHHHHhcCCCCeeeEEEeeccCCeeEEEEEe
Q 002021 682 DGFSENNLIGRGGFGSVYKASLGDGMEVAVKVFTSQC--GRAFKSFDVECEIMKSIRHRNLIKVISSCSNEEFKALVLEY 759 (979)
Q Consensus 682 ~~~~~~~~lG~G~~g~Vy~~~~~~~~~vAvK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~E~ 759 (979)
++|+..+.||+|+||.||+|...+|+.||||++.... ....+.+.+|+++++.++||||+++++++.+++..++||||
T Consensus 2 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 81 (288)
T 1ob3_A 2 EKYHGLEKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVIHTKKRLVLVFEH 81 (288)
T ss_dssp CSEEEEEEEEEETTEEEEEEEETTSCEEEEEEECCSSGGGCCCHHHHHHHHGGGGCCCTTBCCEEEEEECSSCEEEEEEC
T ss_pred ccchhhhhcccCCCEEEEEEEcCCCCEEEEEEEeccccccccchhHHHHHHHHHhcCCCCEeeeeeEEccCCeEEEEEEe
Confidence 4688889999999999999987789999999986543 22346788999999999999999999999999999999999
Q ss_pred cCCCccceeeccCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCEEeCCCCcEEEEeeccccccCCCCCcc
Q 002021 760 MPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFSIAKMLTGEDQSM 839 (979)
Q Consensus 760 ~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~i~H~Dik~~NIll~~~~~~kl~Dfg~~~~~~~~~~~~ 839 (979)
+++ +|.+++......+++..+..++.|+++||+||| +++|+||||||+||+++.++.+||+|||++........
T Consensus 82 ~~~-~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~-- 155 (288)
T 1ob3_A 82 LDQ-DLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCH---DRRVLHRDLKPQNLLINREGELKIADFGLARAFGIPVR-- 155 (288)
T ss_dssp CSE-EHHHHHHTSTTCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEECTTSCEEECCTTHHHHHCC-----
T ss_pred cCC-CHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCHHHEEEcCCCCEEEeECccccccCcccc--
Confidence 975 999998877677999999999999999999999 99999999999999999999999999999987643221
Q ss_pred eecccccCCCCCCccccCC-CCCCCchhHHHHHHHHHHHHcCCCCCcccccCcchHhHhhhhhc---CCccchh-----h
Q 002021 840 IQTQTLATIGYMAPEYGRE-GRVSANGDVYSFGIMLMETFTGKKPTDEIFNGEMTLKHWVNDWL---PISTMEV-----V 910 (979)
Q Consensus 840 ~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwslG~il~el~tg~~P~~~~~~~~~~~~~~~~~~~---~~~~~~~-----~ 910 (979)
......+|+.|+|||++.+ ..++.++||||+||++|||++|+.||......+. ......... ....... .
T Consensus 156 ~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (288)
T 1ob3_A 156 KYTHEIVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEADQ-LMRIFRILGTPNSKNWPNVTELPKY 234 (288)
T ss_dssp ------CCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHH-HHHHHHHHCCCCTTTSTTGGGSTTC
T ss_pred ccccccccccccCchheeCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHH-HHHHHHHHCCCChhhchhhhccccc
Confidence 2244578999999999865 4589999999999999999999999975332211 111111100 0000000 0
Q ss_pred cccccCchh-hhhHHHHHHHHHHHHHHHhccccCcCCCCCHHHHHHH
Q 002021 911 DANLLSQED-IHFVAKEQCVSFVFNLAMECTMEFPKQRINAKEIVTK 956 (979)
Q Consensus 911 ~~~~~~~~~-~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~eil~~ 956 (979)
++....... ........++.++.+++.+|++.||++|||+.|+++|
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~h 281 (288)
T 1ob3_A 235 DPNFTVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQALEH 281 (288)
T ss_dssp CTTCCCCCCCCGGGTCCSCCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred ccccccccCccHHHHhhhcCHHHHHHHHHHcCCCcccCCCHHHHhcC
Confidence 000000000 0000112345678999999999999999999999875
No 103
>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A*
Probab=100.00 E-value=3.9e-39 Score=350.80 Aligned_cols=253 Identities=27% Similarity=0.433 Sum_probs=206.2
Q ss_pred hCCCCCCceeeeecceEEEEEEc-CCCcEEEEEEecccccc-------chhcHHHHHHHHHhcCCCCeeeEEEeeccCCe
Q 002021 681 TDGFSENNLIGRGGFGSVYKASL-GDGMEVAVKVFTSQCGR-------AFKSFDVECEIMKSIRHRNLIKVISSCSNEEF 752 (979)
Q Consensus 681 ~~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vAvK~~~~~~~~-------~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~ 752 (979)
.++|+..+.||+|+||.||+|.. .+++.||||++...... ..+.+.+|++++++++||||+++++++.+..
T Consensus 18 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~- 96 (287)
T 4f0f_A 18 DNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIVKLYGLMHNPP- 96 (287)
T ss_dssp STTEEEEEECCCCSSSCEEEEEETTTCCEEEEEECCCCTTTCCHHHHCCSHHHHHHHHHHTTCCCTTBCCEEEEETTTT-
T ss_pred hccceehhccccCCceeEEEEEEcCCceEEEEEEeeccccccchhHHHHHHHHHHHHHHHHhCCCCCchhhheeecCCC-
Confidence 36788899999999999999954 68999999998644321 1267889999999999999999999997665
Q ss_pred eEEEEEecCCCccceeeccCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCC--eEecCCCCCCEEeCCCCc-----EEEEe
Q 002021 753 KALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGYSAP--VIHCDLKPSNVLLDDNMV-----AHLSD 825 (979)
Q Consensus 753 ~~lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~--i~H~Dik~~NIll~~~~~-----~kl~D 825 (979)
++||||+++|+|.+++......+++..++.++.|++.|++||| +++ |+||||||+||+++.++. +||+|
T Consensus 97 -~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~l~~~l~~lH---~~~~~ivH~dikp~Nil~~~~~~~~~~~~kl~D 172 (287)
T 4f0f_A 97 -RMVMEFVPCGDLYHRLLDKAHPIKWSVKLRLMLDIALGIEYMQ---NQNPPIVHRDLRSPNIFLQSLDENAPVCAKVAD 172 (287)
T ss_dssp -EEEEECCTTCBHHHHHHCTTSCCCHHHHHHHHHHHHHHHHHHH---TSSSCCBCSCCSGGGEEESCCCTTCSCCEEECC
T ss_pred -eEEEEecCCCCHHHHHhcccCCccHHHHHHHHHHHHHHHHHHH---hCCCCeecCCCCcceEEEeccCCCCceeEEeCC
Confidence 6999999999999999887778999999999999999999999 888 999999999999988776 99999
Q ss_pred eccccccCCCCCcceecccccCCCCCCcccc--CCCCCCCchhHHHHHHHHHHHHcCCCCCcccccCcchHhHhhhhhcC
Q 002021 826 FSIAKMLTGEDQSMIQTQTLATIGYMAPEYG--REGRVSANGDVYSFGIMLMETFTGKKPTDEIFNGEMTLKHWVNDWLP 903 (979)
Q Consensus 826 fg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~--~~~~~~~~~DvwslG~il~el~tg~~P~~~~~~~~~~~~~~~~~~~~ 903 (979)
||+++.... ......||+.|+|||.+ ....+++++||||+|+++|||++|+.||...................
T Consensus 173 fg~~~~~~~-----~~~~~~g~~~y~aPE~~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~ 247 (287)
T 4f0f_A 173 FGLSQQSVH-----SVSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFDEYSYGKIKFINMIREEGL 247 (287)
T ss_dssp CTTCBCCSS-----CEECCCCCCTTSCGGGSSCSSCEECHHHHHHHHHHHHHHHHHSSCTTTTCCCCHHHHHHHHHHSCC
T ss_pred CCccccccc-----cccccCCCccccCchhhccCCCCcCchhhHHHHHHHHHHHHcCCCCCccccccHHHHHHHHhccCC
Confidence 999975432 12446789999999998 34567899999999999999999999997644333222221111100
Q ss_pred CccchhhcccccCchhhhhHHHHHHHHHHHHHHHhccccCcCCCCCHHHHHHHHHHh
Q 002021 904 ISTMEVVDANLLSQEDIHFVAKEQCVSFVFNLAMECTMEFPKQRINAKEIVTKLLKI 960 (979)
Q Consensus 904 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~eil~~L~~~ 960 (979)
....+..+++.+.+++.+||+.||++|||+.|+++.|+++
T Consensus 248 -----------------~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~L~~l 287 (287)
T 4f0f_A 248 -----------------RPTIPEDCPPRLRNVIELCWSGDPKKRPHFSYIVKELSEL 287 (287)
T ss_dssp -----------------CCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTC
T ss_pred -----------------CCCCCcccCHHHHHHHHHHhcCChhhCcCHHHHHHHHHhC
Confidence 0011234566799999999999999999999999999864
No 104
>2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B
Probab=100.00 E-value=1.3e-39 Score=365.85 Aligned_cols=253 Identities=22% Similarity=0.351 Sum_probs=206.0
Q ss_pred hhCCCCCCceeeeecceEEEEEE-cCCCcEEEEEEecccc--ccchhcHHHHHHHHHhcCCCCeeeEEEeeccCCeeEEE
Q 002021 680 ATDGFSENNLIGRGGFGSVYKAS-LGDGMEVAVKVFTSQC--GRAFKSFDVECEIMKSIRHRNLIKVISSCSNEEFKALV 756 (979)
Q Consensus 680 ~~~~~~~~~~lG~G~~g~Vy~~~-~~~~~~vAvK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 756 (979)
..++|+..+.||+|+||.||+|. ..+|+.||||++.... ....+.+.+|+++++.++||||+++++++.+++..++|
T Consensus 27 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~lv 106 (362)
T 2bdw_A 27 FSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLV 106 (362)
T ss_dssp HHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEE
T ss_pred cccCeEEeeEEecCCCeEEEEEEECCCCCEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEE
Confidence 34678999999999999999995 4578999999986542 23446788999999999999999999999999999999
Q ss_pred EEecCCCccceeeccCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCEEeCCCC---cEEEEeeccccccC
Q 002021 757 LEYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNM---VAHLSDFSIAKMLT 833 (979)
Q Consensus 757 ~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~i~H~Dik~~NIll~~~~---~~kl~Dfg~~~~~~ 833 (979)
|||+++|+|.+++.... .+++.++..++.||+.||+||| +++|+||||||+||+++.++ .+||+|||++....
T Consensus 107 ~e~~~gg~L~~~l~~~~-~~~~~~~~~~~~qi~~al~~lH---~~~ivH~Dlkp~NIll~~~~~~~~~kl~DfG~a~~~~ 182 (362)
T 2bdw_A 107 FDLVTGGELFEDIVARE-FYSEADASHCIQQILESIAYCH---SNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVN 182 (362)
T ss_dssp ECCCCSCBHHHHHTTCS-CCCHHHHHHHHHHHHHHHHHHH---HTTCBCCCCSGGGEEESCSSTTCCEEECCCTTCBCCT
T ss_pred EecCCCCCHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHH---HCCeEeccCchHHEEEecCCCCCCEEEeecCcceEec
Confidence 99999999999887653 6899999999999999999999 99999999999999998654 59999999998764
Q ss_pred CCCCcceecccccCCCCCCccccCCCCCCCchhHHHHHHHHHHHHcCCCCCcccccCcchHhHhhhhhcCCccchhhccc
Q 002021 834 GEDQSMIQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFTGKKPTDEIFNGEMTLKHWVNDWLPISTMEVVDAN 913 (979)
Q Consensus 834 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 913 (979)
... ......||+.|+|||++.+..++.++||||+||++|||++|+.||...... .....+....
T Consensus 183 ~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~Pf~~~~~~--~~~~~i~~~~----------- 246 (362)
T 2bdw_A 183 DSE---AWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQH--RLYAQIKAGA----------- 246 (362)
T ss_dssp TCC---SCCCSCSCTTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHH--HHHHHHHHTC-----------
T ss_pred CCc---ccccCCCCccccCHHHHccCCCCchhhHHHHHHHHHHHHHCCCCCCCCCHH--HHHHHHHhCC-----------
Confidence 322 224467999999999999889999999999999999999999998653211 1111110000
Q ss_pred ccCchhhhhHHHHHHHHHHHHHHHhccccCcCCCCCHHHHHHH
Q 002021 914 LLSQEDIHFVAKEQCVSFVFNLAMECTMEFPKQRINAKEIVTK 956 (979)
Q Consensus 914 ~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~eil~~ 956 (979)
. .........+++++.+++.+||+.||++|||+.|+++|
T Consensus 247 -~---~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h 285 (362)
T 2bdw_A 247 -Y---DYPSPEWDTVTPEAKSLIDSMLTVNPKKRITADQALKV 285 (362)
T ss_dssp -C---CCCTTGGGGSCHHHHHHHHHHSCSSGGGSCCHHHHTTS
T ss_pred -C---CCCcccccCCCHHHHHHHHHHcCCChhhCcCHHHHhcC
Confidence 0 00011123456779999999999999999999999887
No 105
>1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A*
Probab=100.00 E-value=6.5e-40 Score=355.73 Aligned_cols=260 Identities=23% Similarity=0.357 Sum_probs=201.1
Q ss_pred hCCCCCCceeeeecceEEEEEEcC----CCcEEEEEEecccc-ccchhcHHHHHHHHHhcCCCCeeeEEEeeccCCeeEE
Q 002021 681 TDGFSENNLIGRGGFGSVYKASLG----DGMEVAVKVFTSQC-GRAFKSFDVECEIMKSIRHRNLIKVISSCSNEEFKAL 755 (979)
Q Consensus 681 ~~~~~~~~~lG~G~~g~Vy~~~~~----~~~~vAvK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 755 (979)
.++|+..+.||+|+||.||+|... .+..||||++.... ....+.+.+|+.++++++||||+++++++. ++..++
T Consensus 14 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-~~~~~l 92 (281)
T 1mp8_A 14 RERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVIT-ENPVWI 92 (281)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEECCC--CCEEEEEEECTTTTSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEC-SSSCEE
T ss_pred hHHeEEEeEeeecCCeeEEEEEEecCCCCceEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCccceEEEEEc-cCccEE
Confidence 357888899999999999999653 35679999986543 234567889999999999999999999985 456889
Q ss_pred EEEecCCCccceeeccCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCEEeCCCCcEEEEeeccccccCCC
Q 002021 756 VLEYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFSIAKMLTGE 835 (979)
Q Consensus 756 v~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~i~H~Dik~~NIll~~~~~~kl~Dfg~~~~~~~~ 835 (979)
||||+++++|.+++......+++..++.++.|++.||+||| +++|+||||||+||+++.++.+||+|||++......
T Consensus 93 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~ 169 (281)
T 1mp8_A 93 IMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLE---SKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDS 169 (281)
T ss_dssp EEECCTTEEHHHHHHHTTTTSCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEEEETTEEEECC----------
T ss_pred EEecCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH---hCCeecccccHHHEEECCCCCEEECccccccccCcc
Confidence 99999999999999877667999999999999999999999 999999999999999999999999999999876433
Q ss_pred CCcceecccccCCCCCCccccCCCCCCCchhHHHHHHHHHHHHc-CCCCCcccccCcchHhHhhhhhcCCccchhhcccc
Q 002021 836 DQSMIQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFT-GKKPTDEIFNGEMTLKHWVNDWLPISTMEVVDANL 914 (979)
Q Consensus 836 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~t-g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 914 (979)
.. .......+|+.|+|||.+.+..++.++||||+|+++|||++ |..||......+ ....+....
T Consensus 170 ~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~ell~~g~~pf~~~~~~~--~~~~i~~~~------------ 234 (281)
T 1mp8_A 170 TY-YKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNND--VIGRIENGE------------ 234 (281)
T ss_dssp ----------CCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTSCCTTTTCCGGG--HHHHHHTTC------------
T ss_pred cc-cccccCCCcccccChhhcccCCCCCccCchHHHHHHHHHHhcCCCCCCcCCHHH--HHHHHHcCC------------
Confidence 21 22234456789999999988889999999999999999997 999987533221 111111000
Q ss_pred cCchhhhhHHHHHHHHHHHHHHHhccccCcCCCCCHHHHHHHHHHhHHhhc
Q 002021 915 LSQEDIHFVAKEQCVSFVFNLAMECTMEFPKQRINAKEIVTKLLKIRDSLL 965 (979)
Q Consensus 915 ~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~eil~~L~~~~~~~~ 965 (979)
....+..+++.+.+++.+||..||++|||+.|++++|+++.++.+
T Consensus 235 ------~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~~~~~ 279 (281)
T 1mp8_A 235 ------RLPMPPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQLSTILEEEK 279 (281)
T ss_dssp ------CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHHH
T ss_pred ------CCCCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHHhc
Confidence 001123456779999999999999999999999999999987654
No 106
>3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} SCOP: d.144.1.7 PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A
Probab=100.00 E-value=2.4e-39 Score=353.31 Aligned_cols=269 Identities=22% Similarity=0.237 Sum_probs=205.0
Q ss_pred CCCCCCceeeeecceEEEEEEc-CCCcEEEEEEeccccc--cchhcHHHHHHHHHhcCCCCeeeEEEeeccCCeeEEEEE
Q 002021 682 DGFSENNLIGRGGFGSVYKASL-GDGMEVAVKVFTSQCG--RAFKSFDVECEIMKSIRHRNLIKVISSCSNEEFKALVLE 758 (979)
Q Consensus 682 ~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vAvK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~E 758 (979)
++|+..+.||+|+||.||+|.. .+++.||||++..... ...+.+.+|++++++++||||+++++++.+++..++|||
T Consensus 2 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 81 (292)
T 3o0g_A 2 QKYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHSDKKLTLVFE 81 (292)
T ss_dssp CSEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEESSCSSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred CCceeeeEecCCCCeEEEEEEECCCCceEEEEeeeccCCcCCcchHHHHHHHHHhcCCCCCEeeEEeEEEeCCEEEEEEe
Confidence 4688899999999999999954 5789999999875432 234678899999999999999999999999999999999
Q ss_pred ecCCCccceeeccCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCEEeCCCCcEEEEeeccccccCCCCCc
Q 002021 759 YMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFSIAKMLTGEDQS 838 (979)
Q Consensus 759 ~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~i~H~Dik~~NIll~~~~~~kl~Dfg~~~~~~~~~~~ 838 (979)
|+++ ++.+++......+++.+++.++.|++.||+||| +++|+||||||+||+++.++.+||+|||++.......
T Consensus 82 ~~~~-~l~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lH---~~~ivH~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~-- 155 (292)
T 3o0g_A 82 FCDQ-DLKKYFDSCNGDLDPEIVKSFLFQLLKGLGFCH---SRNVLHRDLKPQNLLINRNGELKLANFGLARAFGIPV-- 155 (292)
T ss_dssp CCSE-EHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECTTSCEEECCCTTCEECCSCC--
T ss_pred cCCC-CHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCHHHEEEcCCCCEEEeecccceecCCcc--
Confidence 9975 666666665667999999999999999999999 9999999999999999999999999999998764322
Q ss_pred ceecccccCCCCCCccccCCCC-CCCchhHHHHHHHHHHHHcCCCCCcccccCcchHhHhhhhhcC---Cccchhhc---
Q 002021 839 MIQTQTLATIGYMAPEYGREGR-VSANGDVYSFGIMLMETFTGKKPTDEIFNGEMTLKHWVNDWLP---ISTMEVVD--- 911 (979)
Q Consensus 839 ~~~~~~~gt~~y~aPE~~~~~~-~~~~~DvwslG~il~el~tg~~P~~~~~~~~~~~~~~~~~~~~---~~~~~~~~--- 911 (979)
.......+|+.|+|||++.+.. ++.++||||+||++|||++|+.||................... .......+
T Consensus 156 ~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~~~~p~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~ 235 (292)
T 3o0g_A 156 RCYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEEQWPSMTKLPD 235 (292)
T ss_dssp SCCCSCCSCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHTTTSCCSCCCSSHHHHHHHHHHHHCCCCTTTCTTGGGSTT
T ss_pred ccccCCccccCCcChHHHcCCCCcCchHHHHHHHHHHHHHHHcCCCCcCCCCHHHHHHHHHHHhCCCChhhhhhhccccc
Confidence 2234557899999999987765 7999999999999999999999864432222222222211110 00000000
Q ss_pred cc---ccCchhhhhHHHHHHHHHHHHHHHhccccCcCCCCCHHHHHHH
Q 002021 912 AN---LLSQEDIHFVAKEQCVSFVFNLAMECTMEFPKQRINAKEIVTK 956 (979)
Q Consensus 912 ~~---~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~eil~~ 956 (979)
.. ..............++.++.+++.+|++.||++|||++|+++|
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h 283 (292)
T 3o0g_A 236 YKPYPMYPATTSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEALQH 283 (292)
T ss_dssp CCCCCCCCTTCCCTTTSTTCCHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred ccccccccCCcchhhcccccChHHHHHHHHHhccChhhCCCHHHHhcC
Confidence 00 0000000001112355678999999999999999999999875
No 107
>2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens}
Probab=100.00 E-value=1.9e-39 Score=355.32 Aligned_cols=250 Identities=25% Similarity=0.337 Sum_probs=197.8
Q ss_pred hCCCCCCceeeeecceEEEEEE-cCCCcEEEEEEeccccc--------------------------cchhcHHHHHHHHH
Q 002021 681 TDGFSENNLIGRGGFGSVYKAS-LGDGMEVAVKVFTSQCG--------------------------RAFKSFDVECEIMK 733 (979)
Q Consensus 681 ~~~~~~~~~lG~G~~g~Vy~~~-~~~~~~vAvK~~~~~~~--------------------------~~~~~~~~E~~~l~ 733 (979)
.++|+..+.||+|+||.||+|. ..+++.||||++..... ...+.+.+|+++++
T Consensus 12 ~~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~ 91 (298)
T 2zv2_A 12 LNQYTLKDEIGKGSYGVVKLAYNENDNTYYAMKVLSKKKLIRQAGFPRRPPPRGTRPAPGGCIQPRGPIEQVYQEIAILK 91 (298)
T ss_dssp ETTEEEEEEEEC--CCEEEEEEETTTTEEEEEEEEECC-------------------------------CHHHHHHHHHH
T ss_pred ecceEEEeEEeecCCEEEEEEEECCCCcEEEEEEeehhhhhhhcccccccccccccccccccccccchHHHHHHHHHHHH
Confidence 4678899999999999999995 46789999999864321 12356889999999
Q ss_pred hcCCCCeeeEEEeecc--CCeeEEEEEecCCCccceeeccCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCC
Q 002021 734 SIRHRNLIKVISSCSN--EEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPS 811 (979)
Q Consensus 734 ~l~h~niv~l~~~~~~--~~~~~lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~i~H~Dik~~ 811 (979)
+++||||+++++++.+ .+..++||||+++++|.+++.. ..+++.+++.++.|+++||+||| +++|+||||||+
T Consensus 92 ~l~h~~iv~~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~--~~~~~~~~~~~~~qi~~~l~~lH---~~~ivH~Dlkp~ 166 (298)
T 2zv2_A 92 KLDHPNVVKLVEVLDDPNEDHLYMVFELVNQGPVMEVPTL--KPLSEDQARFYFQDLIKGIEYLH---YQKIIHRDIKPS 166 (298)
T ss_dssp TCCCTTBCCEEEEEECSSSSEEEEEEECCTTCBSCCSSCS--SCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGG
T ss_pred hCCCCCCCeEEEEEEcCCCCEEEEEEecCCCCcHHHHhhc--CCCCHHHHHHHHHHHHHHHHHHH---HCCeeccCCCHH
Confidence 9999999999999876 6788999999999999987654 36899999999999999999999 899999999999
Q ss_pred CEEeCCCCcEEEEeeccccccCCCCCcceecccccCCCCCCccccCCCC---CCCchhHHHHHHHHHHHHcCCCCCcccc
Q 002021 812 NVLLDDNMVAHLSDFSIAKMLTGEDQSMIQTQTLATIGYMAPEYGREGR---VSANGDVYSFGIMLMETFTGKKPTDEIF 888 (979)
Q Consensus 812 NIll~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~---~~~~~DvwslG~il~el~tg~~P~~~~~ 888 (979)
||+++.++.+||+|||++........ ......||+.|+|||.+.+.. ++.++||||+||++|||++|+.||....
T Consensus 167 Nil~~~~~~~kl~Dfg~~~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~ 244 (298)
T 2zv2_A 167 NLLVGEDGHIKIADFGVSNEFKGSDA--LLSNTVGTPAFMAPESLSETRKIFSGKALDVWAMGVTLYCFVFGQCPFMDER 244 (298)
T ss_dssp GEEECTTSCEEECCCTTCEECSSSSC--EECCCCSCGGGCCGGGCCTTCCCEESHHHHHHHHHHHHHHHHHSSCSSCCSS
T ss_pred HEEECCCCCEEEecCCCccccccccc--cccCCcCCccccChhhhccCCCCCCCchhhhHhHHHHHHHHHHCCCCCCCcc
Confidence 99999999999999999987643322 234567999999999987654 4788999999999999999999996521
Q ss_pred cCcchHhHhhhhhcCCccchhhcccccCchhhhhHHHHHHHHHHHHHHHhccccCcCCCCCHHHHHHH
Q 002021 889 NGEMTLKHWVNDWLPISTMEVVDANLLSQEDIHFVAKEQCVSFVFNLAMECTMEFPKQRINAKEIVTK 956 (979)
Q Consensus 889 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~eil~~ 956 (979)
.. .....+.... . ..+....+++++.+++.+||+.||++|||+.|+++|
T Consensus 245 ~~--~~~~~~~~~~------------~-----~~~~~~~~~~~l~~li~~~l~~dp~~R~s~~e~l~h 293 (298)
T 2zv2_A 245 IM--CLHSKIKSQA------------L-----EFPDQPDIAEDLKDLITRMLDKNPESRIVVPEIKLH 293 (298)
T ss_dssp HH--HHHHHHHHCC------------C-----CCCSSSCCCHHHHHHHHHHTCSCTTTSCCHHHHTTC
T ss_pred HH--HHHHHHhccc------------C-----CCCCccccCHHHHHHHHHHhhcChhhCCCHHHHhcC
Confidence 11 1111000000 0 000112345678999999999999999999999875
No 108
>3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*
Probab=100.00 E-value=7.3e-40 Score=352.50 Aligned_cols=257 Identities=27% Similarity=0.422 Sum_probs=213.0
Q ss_pred CCCCCCceeeeecceEEEEEEcCCCcEEEEEEeccccccchhcHHHHHHHHHhcCCCCeeeEEEeeccCCeeEEEEEecC
Q 002021 682 DGFSENNLIGRGGFGSVYKASLGDGMEVAVKVFTSQCGRAFKSFDVECEIMKSIRHRNLIKVISSCSNEEFKALVLEYMP 761 (979)
Q Consensus 682 ~~~~~~~~lG~G~~g~Vy~~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~E~~~ 761 (979)
++|+..+.||+|+||.||+|...+++.||+|++.... ...+.+.+|+++++.++||||+++++++.+++..++||||++
T Consensus 8 ~~y~~~~~lg~G~~g~V~~~~~~~~~~vaiK~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~ 86 (267)
T 3t9t_A 8 SELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGA-MSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVTEFME 86 (267)
T ss_dssp GGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECTTT-BCHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSCEEEECCCT
T ss_pred hheeeeeEecCCCceeEEEEEecCCCeEEEEEccccC-CCHHHHHHHHHHHHhCCCCCEeeEEEEEccCCCeEEEEeCCC
Confidence 5678889999999999999988788999999997543 234678999999999999999999999999999999999999
Q ss_pred CCccceeeccCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCEEeCCCCcEEEEeeccccccCCCCCccee
Q 002021 762 HGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFSIAKMLTGEDQSMIQ 841 (979)
Q Consensus 762 ~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~i~H~Dik~~NIll~~~~~~kl~Dfg~~~~~~~~~~~~~~ 841 (979)
+++|.+++......+++..++.++.|++.|++||| +++|+||||||+||+++.++.+||+|||.+....... ....
T Consensus 87 ~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~~-~~~~ 162 (267)
T 3t9t_A 87 HGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLE---EACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQ-YTSS 162 (267)
T ss_dssp TCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSSCCGGGEEECGGGCEEECCTTGGGGBCCHH-HHST
T ss_pred CCcHHHHHhhCcccCCHHHHHHHHHHHHHHHHHHH---hCCcccCCCchheEEECCCCCEEEccccccccccccc-cccc
Confidence 99999999877667999999999999999999999 9999999999999999999999999999998754221 1122
Q ss_pred cccccCCCCCCccccCCCCCCCchhHHHHHHHHHHHHc-CCCCCcccccCcchHhHhhhhhcCCccchhhcccccCchhh
Q 002021 842 TQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFT-GKKPTDEIFNGEMTLKHWVNDWLPISTMEVVDANLLSQEDI 920 (979)
Q Consensus 842 ~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~t-g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 920 (979)
....+++.|+|||.+.+..+++++||||+|+++|||++ |+.||......+ ....+.....
T Consensus 163 ~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~--~~~~i~~~~~----------------- 223 (267)
T 3t9t_A 163 TGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSE--VVEDISTGFR----------------- 223 (267)
T ss_dssp TSTTCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHH--HHHHHHTTCC-----------------
T ss_pred ccccccccccChhhhcCCCccchhchhhhHHHHHHHhccCCCCCCCCCHHH--HHHHHhcCCc-----------------
Confidence 33456788999999988889999999999999999999 899986532111 1111100000
Q ss_pred hhHHHHHHHHHHHHHHHhccccCcCCCCCHHHHHHHHHHhHHh
Q 002021 921 HFVAKEQCVSFVFNLAMECTMEFPKQRINAKEIVTKLLKIRDS 963 (979)
Q Consensus 921 ~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~eil~~L~~~~~~ 963 (979)
...+..++..+.+++.+||+.||++|||+.|++++|+++.++
T Consensus 224 -~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~L~~l~~~ 265 (267)
T 3t9t_A 224 -LYKPRLASTHVYQIMNHCWRERPEDRPAFSRLLRQLAEIAES 265 (267)
T ss_dssp -CCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHC
T ss_pred -CCCCccCcHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHhc
Confidence 001122356689999999999999999999999999999864
No 109
>4hgt_A Casein kinase I isoform delta; CK1D, inhibitor, transferase-transferase inhibitor C; HET: 15G; 1.80A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 3uzp_A* 4hnf_A* 1cki_A 1ckj_A 4hni_A* 4hok_A
Probab=100.00 E-value=4.2e-39 Score=352.22 Aligned_cols=275 Identities=19% Similarity=0.210 Sum_probs=219.1
Q ss_pred hhCCCCCCceeeeecceEEEEEE-cCCCcEEEEEEeccccccchhcHHHHHHHHHhcCCCCeeeEEEee-ccCCeeEEEE
Q 002021 680 ATDGFSENNLIGRGGFGSVYKAS-LGDGMEVAVKVFTSQCGRAFKSFDVECEIMKSIRHRNLIKVISSC-SNEEFKALVL 757 (979)
Q Consensus 680 ~~~~~~~~~~lG~G~~g~Vy~~~-~~~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~-~~~~~~~lv~ 757 (979)
..++|+..+.||+|+||.||+|. ..+++.||||++... ...+.+.+|+++++.++|++++..++++ .+.+..++||
T Consensus 7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~--~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~ 84 (296)
T 4hgt_A 7 VGNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVK--TKHPQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVMVM 84 (296)
T ss_dssp ----CEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEC-----CCCHHHHHHHHHHHTTSTTCCCEEEEEEETTEEEEEE
T ss_pred cCCceEEeeeecCCCCeEEEEEEEcCCCceEEEEeeccc--ccchHHHHHHHHHHHhcCCCCCCeeeeecCCCCceEEEE
Confidence 35789999999999999999995 468999999987544 2345788999999999988877777655 6677889999
Q ss_pred EecCCCccceeeccCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCEEe---CCCCcEEEEeeccccccCC
Q 002021 758 EYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLL---DDNMVAHLSDFSIAKMLTG 834 (979)
Q Consensus 758 E~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~i~H~Dik~~NIll---~~~~~~kl~Dfg~~~~~~~ 834 (979)
||+ +++|.+++......+++.+++.++.|++.||+||| +++|+||||||+||++ ++++.+||+|||++.....
T Consensus 85 e~~-~~~L~~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH---~~~ivH~Dlkp~NIl~~~~~~~~~~kL~Dfg~a~~~~~ 160 (296)
T 4hgt_A 85 ELL-GPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIH---SKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRD 160 (296)
T ss_dssp ECC-CCBHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECCGGGTTCEEECCCTTCEECBC
T ss_pred Ecc-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCHHHeeeeccCCCCeEEEecCccceeccC
Confidence 999 89999999866667999999999999999999999 9999999999999999 7889999999999987654
Q ss_pred CCCc-----ceecccccCCCCCCccccCCCCCCCchhHHHHHHHHHHHHcCCCCCcccccCcc--hHhHhhhhhcCCccc
Q 002021 835 EDQS-----MIQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFTGKKPTDEIFNGEM--TLKHWVNDWLPISTM 907 (979)
Q Consensus 835 ~~~~-----~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~tg~~P~~~~~~~~~--~~~~~~~~~~~~~~~ 907 (979)
.... .......||+.|+|||.+.+..+++++||||+||++|||++|+.||........ .+......
T Consensus 161 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~------- 233 (296)
T 4hgt_A 161 ARTHQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEK------- 233 (296)
T ss_dssp TTTCCBCCCCCSCCCCSCGGGCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSSSSHHHHHHHH-------
T ss_pred cccCccCCCCcccccCCCccccchHHhcCCCCCchhHHHHHHHHHHHHhcCCCCCcccchhhhhhhhhhhhcc-------
Confidence 3221 122345789999999999998999999999999999999999999976432211 11110000
Q ss_pred hhhcccccCchhhhhHHHHHHHHHHHHHHHhccccCcCCCCCHHHHHHHHHHhHHhhccCCCCcceec
Q 002021 908 EVVDANLLSQEDIHFVAKEQCVSFVFNLAMECTMEFPKQRINAKEIVTKLLKIRDSLLRNVGGRCVRQ 975 (979)
Q Consensus 908 ~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~eil~~L~~~~~~~~~~~~~~~~~~ 975 (979)
.... ........+++++.+++.+||+.||++|||+.|+++.|+++.+..........+|.
T Consensus 234 -----~~~~---~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~l~~~l~~~~~~~~~~~~~~~dw~ 293 (296)
T 4hgt_A 234 -----KMST---PIEVLCKGYPSEFATYLNFCRSLRFDDKPDYSYLRQLFRNLFHRQGFSYDYVFDWN 293 (296)
T ss_dssp -----HHHS---CHHHHTTTSCHHHHHHHHHHHTSCTTCCCCHHHHHHHHHHHHHHHTCCTTCCCGGG
T ss_pred -----cccc---hhhhhhccCCHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHhCCCccCccchh
Confidence 0000 00011123467899999999999999999999999999999999998888888886
No 110
>2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens}
Probab=100.00 E-value=1.2e-39 Score=367.20 Aligned_cols=247 Identities=21% Similarity=0.313 Sum_probs=199.7
Q ss_pred CceeeeecceEEEEEE-cCCCcEEEEEEeccccccchhcHHHHHHHHHhcCCCCeeeEEEeeccCCeeEEEEEecCCCcc
Q 002021 687 NNLIGRGGFGSVYKAS-LGDGMEVAVKVFTSQCGRAFKSFDVECEIMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSL 765 (979)
Q Consensus 687 ~~~lG~G~~g~Vy~~~-~~~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~E~~~~g~L 765 (979)
.+.||+|+||.||+|. ..+|+.||||++........+.+.+|++++++++||||+++++++.+.+..++||||+++|+|
T Consensus 94 ~~~lG~G~~g~Vy~a~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~E~~~~~~L 173 (373)
T 2x4f_A 94 TEILGGGRFGQVHKCEETATGLKLAAKIIKTRGMKDKEEVKNEISVMNQLDHANLIQLYDAFESKNDIVLVMEYVDGGEL 173 (373)
T ss_dssp EEECC-----CEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEECCTTCEE
T ss_pred ceEEecCcCEEEEEEEEcCCCcEEEEEEEcccccccHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEEEeCCCCCcH
Confidence 5679999999999995 467999999999765545567889999999999999999999999999999999999999999
Q ss_pred ceeeccCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCEEe--CCCCcEEEEeeccccccCCCCCcceecc
Q 002021 766 EKYLYSSNCILDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLL--DDNMVAHLSDFSIAKMLTGEDQSMIQTQ 843 (979)
Q Consensus 766 ~~~l~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~i~H~Dik~~NIll--~~~~~~kl~Dfg~~~~~~~~~~~~~~~~ 843 (979)
.+++......+++.+++.++.||+.||+||| +++|+||||||+||++ +.++.+||+|||+++.+..... ...
T Consensus 174 ~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LH---~~~ivH~Dlkp~NIll~~~~~~~~kl~DFG~a~~~~~~~~---~~~ 247 (373)
T 2x4f_A 174 FDRIIDESYNLTELDTILFMKQICEGIRHMH---QMYILHLDLKPENILCVNRDAKQIKIIDFGLARRYKPREK---LKV 247 (373)
T ss_dssp HHHHHHTGGGCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEEEETTTTEEEECCCSSCEECCTTCB---CCC
T ss_pred HHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH---HCCcccccCCHHHEEEecCCCCcEEEEeCCCceecCCccc---ccc
Confidence 9999877667999999999999999999999 9999999999999999 5778999999999987643322 234
Q ss_pred cccCCCCCCccccCCCCCCCchhHHHHHHHHHHHHcCCCCCcccccCcchHhHhhhhhcCCccchhhcccccCchhhhhH
Q 002021 844 TLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFTGKKPTDEIFNGEMTLKHWVNDWLPISTMEVVDANLLSQEDIHFV 923 (979)
Q Consensus 844 ~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 923 (979)
..||+.|+|||++.+..++.++|||||||++|||++|+.||...... ............ ....
T Consensus 248 ~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~-~~~~~i~~~~~~----------------~~~~ 310 (373)
T 2x4f_A 248 NFGTPEFLAPEVVNYDFVSFPTDMWSVGVIAYMLLSGLSPFLGDNDA-ETLNNILACRWD----------------LEDE 310 (373)
T ss_dssp CCSSCTTCCHHHHTTCBCCHHHHHHHHHHHHHHHHHSSCTTCCSSHH-HHHHHHHHTCCC----------------SCSG
T ss_pred ccCCCcEeChhhccCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCCHH-HHHHHHHhccCC----------------CChh
Confidence 56999999999998889999999999999999999999999653211 111111111000 0001
Q ss_pred HHHHHHHHHHHHHHhccccCcCCCCCHHHHHHH
Q 002021 924 AKEQCVSFVFNLAMECTMEFPKQRINAKEIVTK 956 (979)
Q Consensus 924 ~~~~~~~~l~~l~~~cl~~dP~~Rps~~eil~~ 956 (979)
....+++++.+++.+|++.||++|||+.|+++|
T Consensus 311 ~~~~~~~~~~~li~~~L~~dp~~Rps~~e~l~h 343 (373)
T 2x4f_A 311 EFQDISEEAKEFISKLLIKEKSWRISASEALKH 343 (373)
T ss_dssp GGTTSCHHHHHHHHTTSCSSGGGSCCHHHHHHS
T ss_pred hhccCCHHHHHHHHHHcCCChhhCCCHHHHhcC
Confidence 122345679999999999999999999999985
No 111
>3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3twj_A* 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A*
Probab=100.00 E-value=5.9e-40 Score=372.62 Aligned_cols=259 Identities=22% Similarity=0.269 Sum_probs=209.2
Q ss_pred HHHHHhhCCCCCCceeeeecceEEEEEEc-CCCcEEEEEEecccc---ccchhcHHHHHHHHHhcCCCCeeeEEEeeccC
Q 002021 675 LELCRATDGFSENNLIGRGGFGSVYKASL-GDGMEVAVKVFTSQC---GRAFKSFDVECEIMKSIRHRNLIKVISSCSNE 750 (979)
Q Consensus 675 ~~~~~~~~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vAvK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~ 750 (979)
.++....++|+..+.||+|+||.||+|+. .+++.||+|++.+.. ....+.+.+|+++++.++||||++++++|.++
T Consensus 62 ~~~~~~~~~y~~~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~k~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~ 141 (410)
T 3v8s_A 62 RDLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQDD 141 (410)
T ss_dssp HHHSCCGGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTCCCSTHHHHHHHHHHCCCTTBCCEEEEEECS
T ss_pred HhcccCccccEEEEEEEcCCCEEEEEEEECCCCcEEEEEEEehhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEEEEC
Confidence 34445567899999999999999999954 568999999986532 23456688999999999999999999999999
Q ss_pred CeeEEEEEecCCCccceeeccCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCEEeCCCCcEEEEeecccc
Q 002021 751 EFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFSIAK 830 (979)
Q Consensus 751 ~~~~lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~i~H~Dik~~NIll~~~~~~kl~Dfg~~~ 830 (979)
+..|+||||+++|+|.+++... .+++..++.++.||+.||+||| +++|+||||||+||+++.++.+||+|||+++
T Consensus 142 ~~~~lV~E~~~gg~L~~~l~~~--~~~e~~~~~~~~qi~~aL~~LH---~~givHrDLKp~NILl~~~g~ikL~DFG~a~ 216 (410)
T 3v8s_A 142 RYLYMVMEYMPGGDLVNLMSNY--DVPEKWARFYTAEVVLALDAIH---SMGFIHRDVKPDNMLLDKSGHLKLADFGTCM 216 (410)
T ss_dssp SEEEEEECCCTTEEHHHHHHHC--CCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECTTSCEEECCCTTCE
T ss_pred CEEEEEEeCCCCCcHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHH---HCCeEeccCCHHHeeECCCCCEEEeccceeE
Confidence 9999999999999999998764 5899999999999999999999 9999999999999999999999999999998
Q ss_pred ccCCCCCcceecccccCCCCCCccccCCCC----CCCchhHHHHHHHHHHHHcCCCCCcccccCcchHhHhhhhhcCCcc
Q 002021 831 MLTGEDQSMIQTQTLATIGYMAPEYGREGR----VSANGDVYSFGIMLMETFTGKKPTDEIFNGEMTLKHWVNDWLPIST 906 (979)
Q Consensus 831 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~----~~~~~DvwslG~il~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~ 906 (979)
...... .......+||+.|+|||++.+.. ++.++||||+||++|||++|+.||...... ..+.......
T Consensus 217 ~~~~~~-~~~~~~~~gt~~Y~APE~l~~~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~~-~~~~~i~~~~----- 289 (410)
T 3v8s_A 217 KMNKEG-MVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLV-GTYSKIMNHK----- 289 (410)
T ss_dssp ECCTTS-EEECCSCCSCGGGCCHHHHHTTTTTCEEETHHHHHHHHHHHHHHHHSSCTTCCSSHH-HHHHHHHTHH-----
T ss_pred eeccCC-cccccCCcCCccccCHHHhhccCCCcCCCCcceEecchHHHHHHHhCCCCCCCCChh-hHHHHHHhcc-----
Confidence 764332 22234568999999999987654 789999999999999999999999752211 1111111100
Q ss_pred chhhcccccCchhhhhHHHHHHHHHHHHHHHhccccCcCC--CCCHHHHHHH
Q 002021 907 MEVVDANLLSQEDIHFVAKEQCVSFVFNLAMECTMEFPKQ--RINAKEIVTK 956 (979)
Q Consensus 907 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~--Rps~~eil~~ 956 (979)
....++....++.++.+++.+|++.+|.+ ||+++||++|
T Consensus 290 -----------~~~~~p~~~~~s~~~~~li~~lL~~~~~rlgR~~~~ei~~H 330 (410)
T 3v8s_A 290 -----------NSLTFPDDNDISKEAKNLICAFLTDREVRLGRNGVEEIKRH 330 (410)
T ss_dssp -----------HHCCCCTTCCCCHHHHHHHHHHSSCGGGCTTSSCHHHHHTS
T ss_pred -----------ccccCCCcccccHHHHHHHHHHccChhhhCCCCCHHHHhcC
Confidence 00011111234567899999999999998 9999999987
No 112
>2jii_A Serine/threonine-protein kinase VRK3 molecule: VA related kinase 3; transferase, pseudo kinase domain, vaccinia related kinase, ATP-binding; 2.00A {Homo sapiens}
Probab=100.00 E-value=1.5e-39 Score=364.85 Aligned_cols=278 Identities=12% Similarity=0.109 Sum_probs=220.6
Q ss_pred CCCCCCceeeeecceEEEEEEcC---------CCcEEEEEEeccccccchhcHHHHHHHHHhcCCCCeee----------
Q 002021 682 DGFSENNLIGRGGFGSVYKASLG---------DGMEVAVKVFTSQCGRAFKSFDVECEIMKSIRHRNLIK---------- 742 (979)
Q Consensus 682 ~~~~~~~~lG~G~~g~Vy~~~~~---------~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~---------- 742 (979)
++|+..+.||+|+||.||+|... +++.||||++... +.+.+|++++++++||||++
T Consensus 42 ~~y~~~~~lg~G~~g~Vy~~~~~~t~~~~~~~~~~~vavK~~~~~-----~~~~~E~~~l~~l~h~niv~~~~~~~~~~~ 116 (352)
T 2jii_A 42 RQWKLKSFQTRDNQGILYEAAPTSTLTCDSGPQKQKFSLKLDAKD-----GRLFNEQNFFQRAAKPLQVNKWKKLYSTPL 116 (352)
T ss_dssp CEEEEEEEEEEETTEEEEEEEECC-----------CEEEEEEETT-----STHHHHHHHHHHHCCHHHHHHHHHHTTCTT
T ss_pred CeEEEEEEecCCCCeEEEEEeecCCccccccccCceEEEEEeccc-----chHHHHHHHHHHhcccchhhhhhhhccCCc
Confidence 67889999999999999999654 3789999998643 56889999999999999998
Q ss_pred -----EEEeecc-CCeeEEEEEecCCCccceeeccC-CCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCEEe
Q 002021 743 -----VISSCSN-EEFKALVLEYMPHGSLEKYLYSS-NCILDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLL 815 (979)
Q Consensus 743 -----l~~~~~~-~~~~~lv~E~~~~g~L~~~l~~~-~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~i~H~Dik~~NIll 815 (979)
+++++.. ++..++||||+ +++|.+++... ...+++.+++.++.|++.||+||| +++|+||||||+||++
T Consensus 117 ~~i~~~~~~~~~~~~~~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH---~~~ivH~Dikp~NIl~ 192 (352)
T 2jii_A 117 LAIPTCMGFGVHQDKYRFLVLPSL-GRSLQSALDVSPKHVLSERSVLQVACRLLDALEFLH---ENEYVHGNVTAENIFV 192 (352)
T ss_dssp CSCCCCCEEEEETTTEEEEEEECC-CEEHHHHHHHSGGGCCCHHHHHHHHHHHHHHHHHHH---HTTCBCSCCCGGGEEE
T ss_pred cCccchhhccccCCcEEEEEecCC-CcCHHHHHHhCCcCCCCHHHHHHHHHHHHHHHHHHH---hCCccCCCCCHHHEEE
Confidence 5666654 77889999999 99999999865 357999999999999999999999 8999999999999999
Q ss_pred CCCC--cEEEEeeccccccCCCCCc-----ceecccccCCCCCCccccCCCCCCCchhHHHHHHHHHHHHcCCCCCcccc
Q 002021 816 DDNM--VAHLSDFSIAKMLTGEDQS-----MIQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFTGKKPTDEIF 888 (979)
Q Consensus 816 ~~~~--~~kl~Dfg~~~~~~~~~~~-----~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~tg~~P~~~~~ 888 (979)
+.++ .+||+|||+++.+...... .......||+.|+|||++.+..++.++|||||||++|||++|+.||....
T Consensus 193 ~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~ 272 (352)
T 2jii_A 193 DPEDQSQVTLAGYGFAFRYCPSGKHVAYVEGSRSPHEGDLEFISMDLHKGCGPSRRSDLQSLGYCMLKWLYGFLPWTNCL 272 (352)
T ss_dssp ETTEEEEEEECCGGGCBCSSGGGCCCCCCTTSSCTTCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSCCTTGGGT
T ss_pred cCCCCceEEEecCcceeeccCCCccccccccccccccCCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCcccCC
Confidence 9998 9999999999876433211 11233478999999999998899999999999999999999999998754
Q ss_pred cCcchHhHhhhhhcCCccchhhcccccCchhhhhHHHHHHHHHHHHHHHhccccCcCCCCCHHHHHHHHHHhHHhhccCC
Q 002021 889 NGEMTLKHWVNDWLPISTMEVVDANLLSQEDIHFVAKEQCVSFVFNLAMECTMEFPKQRINAKEIVTKLLKIRDSLLRNV 968 (979)
Q Consensus 889 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~eil~~L~~~~~~~~~~~ 968 (979)
................. ....+. ......++.++.+++.+||+.||++|||+.|+++.|+++.+......
T Consensus 273 ~~~~~~~~~~~~~~~~~-~~~~~~---------~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~~~~~~~~~~ 342 (352)
T 2jii_A 273 PNTEDIMKQKQKFVDKP-GPFVGP---------CGHWIRPSETLQKYLKVVMALTYEEKPPYAMLRNNLEALLQDLRVSP 342 (352)
T ss_dssp TCHHHHHHHHHHHHHSC-CCEECT---------TSCEECCCHHHHHHHHHHHTCCTTCCCCHHHHHHHHHHHHHHTTCCT
T ss_pred cCHHHHHHHHHhccCCh-hhhhhh---------ccccCCCcHHHHHHHHHHHhCChhhCCCHHHHHHHHHHHHHhcCCCc
Confidence 33333322221111000 000000 00011235679999999999999999999999999999999999999
Q ss_pred CCcceeccCC
Q 002021 969 GGRCVRQSNL 978 (979)
Q Consensus 969 ~~~~~~~~~~ 978 (979)
.++.+|..+|
T Consensus 343 ~~~~dw~~~p 352 (352)
T 2jii_A 343 YDPIGLPMVP 352 (352)
T ss_dssp TSCCCCCC--
T ss_pred CccccCcCCC
Confidence 9999998876
No 113
>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} SCOP: d.144.1.7 PDB: 4fk3_A* 3c4c_A* 3c4d_A* 3idp_A* 4g9r_A* 3ii5_A* 4e26_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 3d4q_A* 4e4x_A* 4g9c_A* ...
Probab=100.00 E-value=1.6e-39 Score=354.16 Aligned_cols=260 Identities=26% Similarity=0.407 Sum_probs=197.3
Q ss_pred hCCCCCCceeeeecceEEEEEEcCCCcEEEEEEecccc--ccchhcHHHHHHHHHhcCCCCeeeEEEeeccCCeeEEEEE
Q 002021 681 TDGFSENNLIGRGGFGSVYKASLGDGMEVAVKVFTSQC--GRAFKSFDVECEIMKSIRHRNLIKVISSCSNEEFKALVLE 758 (979)
Q Consensus 681 ~~~~~~~~~lG~G~~g~Vy~~~~~~~~~vAvK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~E 758 (979)
.++|+..+.||+|+||.||+|.... .||||++.... ....+.+.+|+++++.++||||+++++++ ..+..++|||
T Consensus 23 ~~~y~~~~~lG~G~~g~Vy~~~~~~--~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~-~~~~~~lv~e 99 (289)
T 3og7_A 23 DGQITVGQRIGSGSFGTVYKGKWHG--DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS-TAPQLAIVTQ 99 (289)
T ss_dssp TTSCEEEEEEEECSSEEEEEEESSS--EEEEEEESCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEE-CSSSCEEEEE
T ss_pred ccceeeeeEecCCCCeEEEEEEEcC--ceEEEEEeccCCCHHHHHHHHHHHHHHHhCCCCcEEEEEeec-cCCccEEEEE
Confidence 4679999999999999999998743 59999986543 23456788999999999999999999965 4556889999
Q ss_pred ecCCCccceeeccCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCEEeCCCCcEEEEeeccccccCCCCCc
Q 002021 759 YMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFSIAKMLTGEDQS 838 (979)
Q Consensus 759 ~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~i~H~Dik~~NIll~~~~~~kl~Dfg~~~~~~~~~~~ 838 (979)
|+++++|.+++......+++.+++.++.|++.||+||| +++|+||||||+||+++.++.+||+|||++.........
T Consensus 100 ~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~lH---~~~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~ 176 (289)
T 3og7_A 100 WCEGSSLYHHLHASETKFEMKKLIDIARQTARGMDYLH---AKSIIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGS 176 (289)
T ss_dssp CCCEEEHHHHHTTC---CCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEEETTTEEEECCCC-----------
T ss_pred ecCCCcHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHH---hCCcccccCccceEEECCCCCEEEccceecccccccccc
Confidence 99999999999877778999999999999999999999 999999999999999999999999999999865433333
Q ss_pred ceecccccCCCCCCccccC---CCCCCCchhHHHHHHHHHHHHcCCCCCcccccCcchHhHhhhhh-cCCccchhhcccc
Q 002021 839 MIQTQTLATIGYMAPEYGR---EGRVSANGDVYSFGIMLMETFTGKKPTDEIFNGEMTLKHWVNDW-LPISTMEVVDANL 914 (979)
Q Consensus 839 ~~~~~~~gt~~y~aPE~~~---~~~~~~~~DvwslG~il~el~tg~~P~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~ 914 (979)
.......||+.|+|||.+. +..++.++||||+|+++|||++|+.||......+. ....+... ......
T Consensus 177 ~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~-~~~~~~~~~~~~~~~------- 248 (289)
T 3og7_A 177 HQFEQLSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQ-IIEMVGRGSLSPDLS------- 248 (289)
T ss_dssp -------CCCTTCCHHHHC----CCSCHHHHHHHHHHHHHHHHHSSCTTSSCCCHHH-HHHHHHHTSCCCCTT-------
T ss_pred ccccccCCCccccCchhhcccCCCCCCcccchHHHHHHHHHHHHCCCCccccchHHH-HHHHhcccccCcchh-------
Confidence 3334567899999999886 56688899999999999999999999976432221 11111111 100000
Q ss_pred cCchhhhhHHHHHHHHHHHHHHHhccccCcCCCCCHHHHHHHHHHhHH
Q 002021 915 LSQEDIHFVAKEQCVSFVFNLAMECTMEFPKQRINAKEIVTKLLKIRD 962 (979)
Q Consensus 915 ~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~eil~~L~~~~~ 962 (979)
.....+++.+.+++.+||+.||.+|||+.|+++.|+++.+
T Consensus 249 --------~~~~~~~~~l~~li~~~l~~~p~~Rps~~ell~~L~~l~~ 288 (289)
T 3og7_A 249 --------KVRSNCPKRMKRLMAECLKKKRDERPSFPRILAEIEELAR 288 (289)
T ss_dssp --------SSCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTTC
T ss_pred --------hccccCCHHHHHHHHHHccCChhhCCCHHHHHHHHHHHhh
Confidence 0112455779999999999999999999999999998753
No 114
>4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus}
Probab=100.00 E-value=1.1e-39 Score=368.26 Aligned_cols=255 Identities=20% Similarity=0.264 Sum_probs=202.8
Q ss_pred hCCCCCCceeeeecceEEEEEE-cCCCcEEEEEEecccc---ccchhcHHHHHHHHHhc-CCCCeeeEEEeeccCCeeEE
Q 002021 681 TDGFSENNLIGRGGFGSVYKAS-LGDGMEVAVKVFTSQC---GRAFKSFDVECEIMKSI-RHRNLIKVISSCSNEEFKAL 755 (979)
Q Consensus 681 ~~~~~~~~~lG~G~~g~Vy~~~-~~~~~~vAvK~~~~~~---~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~l 755 (979)
.++|+..+.||+|+||.||+|+ ..+++.||||++++.. ....+.+.+|..++.++ +||||+++++++.+++..++
T Consensus 51 ~~~y~~~~~LG~G~fG~V~~~~~~~~~~~~AvK~~~k~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~~~~~~l 130 (396)
T 4dc2_A 51 LQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMRVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFF 130 (396)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGTC----CCHHHHHHHHHHHHTTCTTBCCEEEEEECSSEEEE
T ss_pred hhHcEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhcCCCCCcCeeEEEEEECCEEEE
Confidence 4678899999999999999995 4568899999997542 23345688899999887 89999999999999999999
Q ss_pred EEEecCCCccceeeccCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCEEeCCCCcEEEEeeccccccCCC
Q 002021 756 VLEYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFSIAKMLTGE 835 (979)
Q Consensus 756 v~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~i~H~Dik~~NIll~~~~~~kl~Dfg~~~~~~~~ 835 (979)
||||+++|+|.+++...+ .+++..++.++.||+.||+||| +++|+||||||+||+++.++.+||+|||+++.....
T Consensus 131 V~E~~~gg~L~~~l~~~~-~l~~~~~~~~~~qi~~aL~~LH---~~givHrDLKp~NILl~~~g~ikL~DFGla~~~~~~ 206 (396)
T 4dc2_A 131 VIEYVNGGDLMFHMQRQR-KLPEEHARFYSAEISLALNYLH---ERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRP 206 (396)
T ss_dssp EEECCTTCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHH---HTTCBCCCCCGGGEEECTTSCEEECCCTTCBCCCCT
T ss_pred EEEcCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHH---HCCEEeccCCHHHEEECCCCCEEEeecceeeecccC
Confidence 999999999999887643 6899999999999999999999 999999999999999999999999999999863322
Q ss_pred CCcceecccccCCCCCCccccCCCCCCCchhHHHHHHHHHHHHcCCCCCcccccCcchH---hHhhhhhcCCccchhhcc
Q 002021 836 DQSMIQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFTGKKPTDEIFNGEMTL---KHWVNDWLPISTMEVVDA 912 (979)
Q Consensus 836 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~tg~~P~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~ 912 (979)
. ......+||+.|+|||++.+..++.++||||+||++|||++|+.||......+... ..++.. .+...
T Consensus 207 ~--~~~~~~~gt~~Y~aPE~l~~~~~~~~~DiwslGvllyell~G~~Pf~~~~~~~~~~~~~~~~~~~-------~i~~~ 277 (396)
T 4dc2_A 207 G--DTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQ-------VILEK 277 (396)
T ss_dssp T--CCBCCCCBCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSTTTTC------CCHHHHHH-------HHHHC
T ss_pred C--CccccccCCcccCCchhhcCCCCChHHHHHHHHHHHHHHHhCCCCCcccccccccchhhHHHHHH-------HHhcc
Confidence 2 22345689999999999999999999999999999999999999996432111100 000000 00000
Q ss_pred cccCchhhhhHHHHHHHHHHHHHHHhccccCcCCCCCH------HHHHHH
Q 002021 913 NLLSQEDIHFVAKEQCVSFVFNLAMECTMEFPKQRINA------KEIVTK 956 (979)
Q Consensus 913 ~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~------~eil~~ 956 (979)
....+..++.++.+++.+||+.||++||++ .|+++|
T Consensus 278 --------~~~~p~~~s~~~~~li~~lL~~dP~~R~~~~~~~~~~ei~~H 319 (396)
T 4dc2_A 278 --------QIRIPRSLSVKAASVLKSFLNKDPKERLGCHPQTGFADIQGH 319 (396)
T ss_dssp --------CCCCCTTSCHHHHHHHHHHTCSCTTTSTTCSTTTHHHHHHHS
T ss_pred --------ccCCCCcCCHHHHHHHHHHhcCCHhHcCCCCCCCCHHHHhcC
Confidence 001122345678999999999999999995 667665
No 115
>3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens}
Probab=100.00 E-value=4e-40 Score=367.76 Aligned_cols=249 Identities=24% Similarity=0.292 Sum_probs=200.6
Q ss_pred hCCCCCCceeeeecceEEEEEE-cCCCcEEEEEEecccc---ccchhcHHHHHHHHHhc-CCCCeeeEEEeeccCCeeEE
Q 002021 681 TDGFSENNLIGRGGFGSVYKAS-LGDGMEVAVKVFTSQC---GRAFKSFDVECEIMKSI-RHRNLIKVISSCSNEEFKAL 755 (979)
Q Consensus 681 ~~~~~~~~~lG~G~~g~Vy~~~-~~~~~~vAvK~~~~~~---~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~l 755 (979)
.++|+..+.||+|+||.||+|+ ..+|+.||||++.... ....+.+.+|.++++.+ +||||+++++++.+++..|+
T Consensus 22 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~~~~~~l 101 (353)
T 3txo_A 22 IDNFEFIRVLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLFCCFQTPDRLFF 101 (353)
T ss_dssp -CCEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHHTTHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEE
T ss_pred hhheEEEEEEeeCCCEEEEEEEEcCCCCEEEEEEEEHHHhcchhHHHHHHHHHHHHHhccCCCceeeEEEEEEeCCEEEE
Confidence 4789999999999999999995 4578999999997542 23446678899999988 69999999999999999999
Q ss_pred EEEecCCCccceeeccCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCEEeCCCCcEEEEeeccccccCCC
Q 002021 756 VLEYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFSIAKMLTGE 835 (979)
Q Consensus 756 v~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~i~H~Dik~~NIll~~~~~~kl~Dfg~~~~~~~~ 835 (979)
||||+++|+|.+++...+ .+++.+++.++.||+.||+||| +++|+||||||+||+++.++.+||+|||+++.....
T Consensus 102 v~E~~~gg~L~~~l~~~~-~~~~~~~~~~~~qi~~aL~~LH---~~givHrDlkp~NILl~~~g~ikL~DFG~a~~~~~~ 177 (353)
T 3txo_A 102 VMEFVNGGDLMFHIQKSR-RFDEARARFYAAEIISALMFLH---DKGIIYRDLKLDNVLLDHEGHCKLADFGMCKEGICN 177 (353)
T ss_dssp EEECCCSCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHH---HTTCBCCCCCGGGEEECTTSCEEECCCTTCBCSCC-
T ss_pred EEeCCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHH---HCCCcccCCCHHHEEECCCCCEEEccccceeecccC
Confidence 999999999999987653 6899999999999999999999 999999999999999999999999999999864322
Q ss_pred CCcceecccccCCCCCCccccCCCCCCCchhHHHHHHHHHHHHcCCCCCcccccCcchHhHhhhhhcCCccchhhccccc
Q 002021 836 DQSMIQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFTGKKPTDEIFNGEMTLKHWVNDWLPISTMEVVDANLL 915 (979)
Q Consensus 836 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 915 (979)
.......+||+.|+|||++.+..++.++||||+||++|||++|+.||......+ .+........
T Consensus 178 --~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~~~-~~~~i~~~~~------------- 241 (353)
T 3txo_A 178 --GVTTATFCGTPDYIAPEILQEMLYGPAVDWWAMGVLLYEMLCGHAPFEAENEDD-LFEAILNDEV------------- 241 (353)
T ss_dssp ----------CCGGGCCHHHHHHHHCTTHHHHHHHHHHHHHHHHSSCSSCCSSHHH-HHHHHHHCCC-------------
T ss_pred --CccccccCCCcCeEChhhcCCCCcCCccCCCcchHHHHHHHhCCCCCCCCCHHH-HHHHHHcCCC-------------
Confidence 222345679999999999988889999999999999999999999997532111 1111111000
Q ss_pred CchhhhhHHHHHHHHHHHHHHHhccccCcCCCCCH------HHHHHH
Q 002021 916 SQEDIHFVAKEQCVSFVFNLAMECTMEFPKQRINA------KEIVTK 956 (979)
Q Consensus 916 ~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~------~eil~~ 956 (979)
..+...+..+.+++.+|++.||++||++ .|+++|
T Consensus 242 -------~~p~~~~~~~~~li~~lL~~dP~~R~~~~~~~~~~~il~h 281 (353)
T 3txo_A 242 -------VYPTWLHEDATGILKSFMTKNPTMRLGSLTQGGEHAILRH 281 (353)
T ss_dssp -------CCCTTSCHHHHHHHHHHTCSSGGGSTTSGGGTCTHHHHTS
T ss_pred -------CCCCCCCHHHHHHHHHHhhhCHHHccCCcccCCHHHHhhC
Confidence 0112245668999999999999999998 777765
No 116
>3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus}
Probab=100.00 E-value=9.2e-40 Score=362.28 Aligned_cols=260 Identities=26% Similarity=0.443 Sum_probs=195.7
Q ss_pred hCCCCCCceeeeecceEEEEEEcCC-C---cEEEEEEeccc--cccchhcHHHHHHHHHhcCCCCeeeEEEeeccCCee-
Q 002021 681 TDGFSENNLIGRGGFGSVYKASLGD-G---MEVAVKVFTSQ--CGRAFKSFDVECEIMKSIRHRNLIKVISSCSNEEFK- 753 (979)
Q Consensus 681 ~~~~~~~~~lG~G~~g~Vy~~~~~~-~---~~vAvK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~- 753 (979)
.++|+..+.||+|+||.||+|.... + ..||||++... .....+.+.+|++++++++||||+++++++......
T Consensus 22 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~ 101 (323)
T 3qup_A 22 EQQFTLGRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSDIEEFLREAACMKEFDHPHVAKLVGVSLRSRAKG 101 (323)
T ss_dssp ---CEEEEEEEEETTEEEEEEEC-------CEEEEEEC------CHHHHHHHHHHHHHTTCCCTTBCCCCEEEECC----
T ss_pred hhHeEEeceecccCCeEEEEEEEcccCCcceeEEEEEecccccCHHHHHHHHHHHHHHHHCCCCceehhhceeecccccc
Confidence 4678999999999999999996543 3 27999998754 234457789999999999999999999999776655
Q ss_pred -----EEEEEecCCCccceeeccC-----CCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCEEeCCCCcEEE
Q 002021 754 -----ALVLEYMPHGSLEKYLYSS-----NCILDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHL 823 (979)
Q Consensus 754 -----~lv~E~~~~g~L~~~l~~~-----~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~i~H~Dik~~NIll~~~~~~kl 823 (979)
++||||+++|+|.+++... ...+++.+++.++.|+++||+||| +++|+||||||+||++++++.+||
T Consensus 102 ~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH---~~~ivH~Dikp~NIli~~~~~~kl 178 (323)
T 3qup_A 102 RLPIPMVILPFMKHGDLHAFLLASRIGENPFNLPLQTLVRFMVDIACGMEYLS---SRNFIHRDLAARNCMLAEDMTVCV 178 (323)
T ss_dssp ---CEEEEEECCTTCBHHHHHHHHHC---CCCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEECTTSCEEE
T ss_pred CCCccEEEEEeccCCcHHHHHHhhhccccccccCHHHHHHHHHHHHHHHHHHH---cCCcccCCCCcceEEEcCCCCEEE
Confidence 9999999999999998643 225899999999999999999999 999999999999999999999999
Q ss_pred EeeccccccCCCCCcceecccccCCCCCCccccCCCCCCCchhHHHHHHHHHHHHc-CCCCCcccccCcchHhHhhhhhc
Q 002021 824 SDFSIAKMLTGEDQSMIQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFT-GKKPTDEIFNGEMTLKHWVNDWL 902 (979)
Q Consensus 824 ~Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~t-g~~P~~~~~~~~~~~~~~~~~~~ 902 (979)
+|||+++...............+++.|+|||.+.+..++.++||||+||++|||++ |+.||......+. .........
T Consensus 179 ~Dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~~~-~~~~~~~~~ 257 (323)
T 3qup_A 179 ADFGLSRKIYSGDYYRQGCASKLPVKWLALESLADNLYTVHSDVWAFGVTMWEIMTRGQTPYAGIENAEI-YNYLIGGNR 257 (323)
T ss_dssp CCCCC-----------------CCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGGGH-HHHHHTTCC
T ss_pred eeccccccccccccccccccccCcccccCchhhcCCCCCCccchhhHHHHHHHHHhCCCCCccccChHHH-HHHHhcCCC
Confidence 99999987654433333344567889999999988899999999999999999999 9999875332211 111110000
Q ss_pred CCccchhhcccccCchhhhhHHHHHHHHHHHHHHHhccccCcCCCCCHHHHHHHHHHhHHh
Q 002021 903 PISTMEVVDANLLSQEDIHFVAKEQCVSFVFNLAMECTMEFPKQRINAKEIVTKLLKIRDS 963 (979)
Q Consensus 903 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~eil~~L~~~~~~ 963 (979)
...+..++.++.+++.+||+.||++|||+.|+++.|+++...
T Consensus 258 -------------------~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~l~~ 299 (323)
T 3qup_A 258 -------------------LKQPPECMEEVYDLMYQCWSADPKQRPSFTCLRMELENILGH 299 (323)
T ss_dssp -------------------CCCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHHC
T ss_pred -------------------CCCCCccCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHH
Confidence 011123456789999999999999999999999999999873
No 117
>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens}
Probab=100.00 E-value=5.2e-39 Score=353.07 Aligned_cols=256 Identities=28% Similarity=0.380 Sum_probs=200.9
Q ss_pred CCCCCCceeeeecceEEEEEEcCCCcEEEEEEeccccccchhcHHHHHHHHHhcCCCCeeeEEEeeccCCeeEEEEEecC
Q 002021 682 DGFSENNLIGRGGFGSVYKASLGDGMEVAVKVFTSQCGRAFKSFDVECEIMKSIRHRNLIKVISSCSNEEFKALVLEYMP 761 (979)
Q Consensus 682 ~~~~~~~~lG~G~~g~Vy~~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~E~~~ 761 (979)
++|+..+.||+|+||.||+|++ .++.||||++... ...+.+.+|++++++++||||+++++++.+ ..++||||++
T Consensus 8 ~~~~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~--~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~--~~~lv~e~~~ 82 (307)
T 2eva_A 8 KEIEVEEVVGRGAFGVVCKAKW-RAKDVAIKQIESE--SERKAFIVELRQLSRVNHPNIVKLYGACLN--PVCLVMEYAE 82 (307)
T ss_dssp GGEEEEEEEECCSSSEEEEEEE-TTEEEEEEECSST--THHHHHHHHHHHHHHCCCTTBCCEEEBCTT--TTEEEEECCT
T ss_pred hHeeeeeEeecCCCceEEEEEE-CCeeEEEEEecCh--hHHHHHHHHHHHHhcCCCCCcCeEEEEEcC--CcEEEEEcCC
Confidence 5678889999999999999987 4789999998643 345678999999999999999999999874 4789999999
Q ss_pred CCccceeeccCCC--CCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCEEeCCCCc-EEEEeeccccccCCCCCc
Q 002021 762 HGSLEKYLYSSNC--ILDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMV-AHLSDFSIAKMLTGEDQS 838 (979)
Q Consensus 762 ~g~L~~~l~~~~~--~l~~~~~~~i~~~ia~~L~~LH~~~~~~i~H~Dik~~NIll~~~~~-~kl~Dfg~~~~~~~~~~~ 838 (979)
+|+|.+++..... .+++..++.++.|+++|++|||....++|+||||||+||+++.++. +||+|||++......
T Consensus 83 ~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~~kl~Dfg~~~~~~~~--- 159 (307)
T 2eva_A 83 GGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTACDIQTH--- 159 (307)
T ss_dssp TCBHHHHHHCSSSEECCCHHHHHHHHHHHHHHHHHHHTCSSSCCCCCCCSGGGEEEETTTTEEEECCCCC----------
T ss_pred CCCHHHHHhccCCCCccCHHHHHHHHHHHHHHHHHHHhCCCCCeecCCCChhHEEEeCCCCEEEEcccccccccccc---
Confidence 9999999976542 4789999999999999999999221289999999999999998886 799999999765322
Q ss_pred ceecccccCCCCCCccccCCCCCCCchhHHHHHHHHHHHHcCCCCCcccccCcchHhHhhhhhcCCccchhhcccccCch
Q 002021 839 MIQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFTGKKPTDEIFNGEMTLKHWVNDWLPISTMEVVDANLLSQE 918 (979)
Q Consensus 839 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 918 (979)
.....||+.|+|||.+.+..++.++||||||+++|||++|+.||...................
T Consensus 160 --~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~--------------- 222 (307)
T 2eva_A 160 --MTNNKGSAAWMAPEVFEGSNYSEKCDVFSWGIILWEVITRRKPFDEIGGPAFRIMWAVHNGTR--------------- 222 (307)
T ss_dssp -------CCTTSSCHHHHTCCCCCTHHHHHHHHHHHHHHHHTCCTTTTTCSSHHHHHHHHHTTCC---------------
T ss_pred --cccCCCCCceEChhhhCCCCCCcHHHHHHHHHHHHHHHHCCCCchhhCccHHHHHHHHhcCCC---------------
Confidence 133468999999999998899999999999999999999999997533222111111000000
Q ss_pred hhhhHHHHHHHHHHHHHHHhccccCcCCCCCHHHHHHHHHHhHHhhc
Q 002021 919 DIHFVAKEQCVSFVFNLAMECTMEFPKQRINAKEIVTKLLKIRDSLL 965 (979)
Q Consensus 919 ~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~eil~~L~~~~~~~~ 965 (979)
......++..+.+++.+||+.||++|||+.|++++|+++.+...
T Consensus 223 ---~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~~~~ 266 (307)
T 2eva_A 223 ---PPLIKNLPKPIESLMTRCWSKDPSQRPSMEEIVKIMTHLMRYFP 266 (307)
T ss_dssp ---CCCBTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHGGGCC
T ss_pred ---CCcccccCHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHHHhcc
Confidence 00112345668999999999999999999999999999986543
No 118
>4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 4ehz_A* 4ei4_A* 4fk6_A* 3eyg_A* 3eyh_A*
Probab=100.00 E-value=1.3e-39 Score=357.45 Aligned_cols=272 Identities=22% Similarity=0.375 Sum_probs=209.9
Q ss_pred CCCCCCceeeeecceEEEEEE-----cCCCcEEEEEEecccc-ccchhcHHHHHHHHHhcCCCCeeeEEEeeccC--Cee
Q 002021 682 DGFSENNLIGRGGFGSVYKAS-----LGDGMEVAVKVFTSQC-GRAFKSFDVECEIMKSIRHRNLIKVISSCSNE--EFK 753 (979)
Q Consensus 682 ~~~~~~~~lG~G~~g~Vy~~~-----~~~~~~vAvK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~--~~~ 753 (979)
..|+..+.||+|+||.||+|. ..+++.||||++.... ....+.+.+|+++++.++||||+++++++.+. ...
T Consensus 21 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~ 100 (302)
T 4e5w_A 21 RFLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKYKGICTEDGGNGI 100 (302)
T ss_dssp GGEEEEEEEEECSSEEEEEEEECTTSSSCSEEEEEEEEC-----CCHHHHHHHHHHHHTCCCTTBCCEEEEEEC---CCE
T ss_pred hhhhhhhccCCCCceEEEEEEEccccCccCeEEEEEEecccccchhHHHHHHHHHHHHhCCCCCeeeeeeEEecCCCceE
Confidence 447788999999999999997 3468999999987543 33457788999999999999999999999776 668
Q ss_pred EEEEEecCCCccceeeccCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCEEeCCCCcEEEEeeccccccC
Q 002021 754 ALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFSIAKMLT 833 (979)
Q Consensus 754 ~lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~i~H~Dik~~NIll~~~~~~kl~Dfg~~~~~~ 833 (979)
++||||+++|+|.+++......+++.+++.++.|++.||+||| +++|+||||||+||+++.++.+||+|||++....
T Consensus 101 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~ 177 (302)
T 4e5w_A 101 KLIMEFLPSGSLKEYLPKNKNKINLKQQLKYAVQICKGMDYLG---SRQYVHRDLAARNVLVESEHQVKIGDFGLTKAIE 177 (302)
T ss_dssp EEEEECCTTCBHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEEEETTEEEECCCTTCEECC
T ss_pred EEEEEeCCCCcHHHHHHhccccCCHHHHHHHHHHHHHHHHHhh---cCCcccCCCchheEEEcCCCCEEECccccccccc
Confidence 9999999999999999776667999999999999999999999 9999999999999999999999999999998765
Q ss_pred CCCCc-ceecccccCCCCCCccccCCCCCCCchhHHHHHHHHHHHHcCCCCCcccccCcchHhHhhhhhcCCccchhhcc
Q 002021 834 GEDQS-MIQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFTGKKPTDEIFNGEMTLKHWVNDWLPISTMEVVDA 912 (979)
Q Consensus 834 ~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 912 (979)
..... .......+|..|+|||.+.+..++.++||||+|+++|||++|+.|+...... ...................
T Consensus 178 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~---~~~~~~~~~~~~~~~~~~~ 254 (302)
T 4e5w_A 178 TDKEYYTVKDDRDSPVFWYAPECLMQSKFYIASDVWSFGVTLHELLTYCDSDSSPMAL---FLKMIGPTHGQMTVTRLVN 254 (302)
T ss_dssp TTCCEEECCCCTTCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHH---HHHHHCSCCGGGHHHHHHH
T ss_pred CCCcceeccCCCCCCccccCCeeecCCCCCcchhHHHHHHHHHHHHHccCCCcchhhH---HhhccCCcccccCHHHHHH
Confidence 43322 2234456788899999998888999999999999999999999986542110 0000000000000000000
Q ss_pred cccCchhhhhHHHHHHHHHHHHHHHhccccCcCCCCCHHHHHHHHHHhH
Q 002021 913 NLLSQEDIHFVAKEQCVSFVFNLAMECTMEFPKQRINAKEIVTKLLKIR 961 (979)
Q Consensus 913 ~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~eil~~L~~~~ 961 (979)
... .......+..+++.+.+++.+||+.||++|||+.|+++.|+++.
T Consensus 255 ~~~--~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~L~~ll 301 (302)
T 4e5w_A 255 TLK--EGKRLPCPPNCPDEVYQLMRKCWEFQPSNRTSFQNLIEGFEALL 301 (302)
T ss_dssp HHH--TTCCCCCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHH
T ss_pred HHh--ccCCCCCCCCCCHHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHh
Confidence 000 00011122345677999999999999999999999999999875
No 119
>2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ...
Probab=100.00 E-value=2.3e-39 Score=357.97 Aligned_cols=273 Identities=23% Similarity=0.372 Sum_probs=219.8
Q ss_pred cccHHHHHHhhCCCCCCceeeeecceEEEEEEc------CCCcEEEEEEeccccc-cchhcHHHHHHHHHhc-CCCCeee
Q 002021 671 MFSYLELCRATDGFSENNLIGRGGFGSVYKASL------GDGMEVAVKVFTSQCG-RAFKSFDVECEIMKSI-RHRNLIK 742 (979)
Q Consensus 671 ~~~~~~~~~~~~~~~~~~~lG~G~~g~Vy~~~~------~~~~~vAvK~~~~~~~-~~~~~~~~E~~~l~~l-~h~niv~ 742 (979)
.+....+....++|+..+.||+|+||.||+|.. .+++.||||++..... ...+.+.+|+++++++ +||||++
T Consensus 16 ~~~~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~ 95 (316)
T 2xir_A 16 PYDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVN 95 (316)
T ss_dssp CCCHHHHBCCGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCC
T ss_pred cccccceecchhheeeeeEEcCCCceeEEEEEEecCCccccceEEEEEecccCCCcHHHHHHHHHHHHHHhcccCCCeee
Confidence 344555556678899999999999999999963 4678999999975432 2346788999999999 7999999
Q ss_pred EEEeeccCC-eeEEEEEecCCCccceeeccCCC---------------CCCHHHHHHHHHHHHHHHHHHhcCCCCCeEec
Q 002021 743 VISSCSNEE-FKALVLEYMPHGSLEKYLYSSNC---------------ILDIFQRLNIMIDVASALEYLHFGYSAPVIHC 806 (979)
Q Consensus 743 l~~~~~~~~-~~~lv~E~~~~g~L~~~l~~~~~---------------~l~~~~~~~i~~~ia~~L~~LH~~~~~~i~H~ 806 (979)
+++++...+ ..++||||+++|+|.+++..... .+++.+++.++.|++.|++||| +++|+||
T Consensus 96 ~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH---~~~i~H~ 172 (316)
T 2xir_A 96 LLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLA---SRKCIHR 172 (316)
T ss_dssp EEEEECCTTSCCEEEEECCTTEEHHHHHHTCTTSEECC-------CTTCEEHHHHHHHHHHHHHHHHHHH---HTTCCCS
T ss_pred EEEEEecCCCceEEEEEcCCCCcHHHHHHhcccccccccccchhhhccccCHHHHHHHHHHHHHHHHHHH---hCCcccc
Confidence 999987654 58999999999999999976543 2789999999999999999999 9999999
Q ss_pred CCCCCCEEeCCCCcEEEEeeccccccCCCCCcceecccccCCCCCCccccCCCCCCCchhHHHHHHHHHHHHc-CCCCCc
Q 002021 807 DLKPSNVLLDDNMVAHLSDFSIAKMLTGEDQSMIQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFT-GKKPTD 885 (979)
Q Consensus 807 Dik~~NIll~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~t-g~~P~~ 885 (979)
||||+||+++.++.+||+|||++................+|+.|+|||.+.+..++.++||||+|+++|||+| |+.||.
T Consensus 173 dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~ 252 (316)
T 2xir_A 173 DLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYP 252 (316)
T ss_dssp CCSGGGEEECGGGCEEECCCGGGSCTTTCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSST
T ss_pred cCccceEEECCCCCEEECCCccccccccCccceeccCCCcceeecCchhhccccccchhHHHHHHHHHHHHHhCCCCCCc
Confidence 9999999999999999999999987654444444455678899999999988899999999999999999998 999987
Q ss_pred ccccCcchHhHhhhhhcCCccchhhcccccCchhhhhHHHHHHHHHHHHHHHhccccCcCCCCCHHHHHHHHHHhHHhhc
Q 002021 886 EIFNGEMTLKHWVNDWLPISTMEVVDANLLSQEDIHFVAKEQCVSFVFNLAMECTMEFPKQRINAKEIVTKLLKIRDSLL 965 (979)
Q Consensus 886 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~eil~~L~~~~~~~~ 965 (979)
.....+...... ..... ...+..+++.+.+++.+||+.||++|||+.|++++|+++.++..
T Consensus 253 ~~~~~~~~~~~~-~~~~~------------------~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~~~~ 313 (316)
T 2xir_A 253 GVKIDEEFCRRL-KEGTR------------------MRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQANA 313 (316)
T ss_dssp TCCCSHHHHHHH-HHTCC------------------CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHHC
T ss_pred ccchhHHHHHHh-ccCcc------------------CCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhhhc
Confidence 533222111111 11000 00112345668999999999999999999999999999987643
No 120
>3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 4hvd_A* 4hvg_A* 4hvh_A* 4hvi_A* 3pjc_A* 1yvj_A*
Probab=100.00 E-value=9.2e-40 Score=362.84 Aligned_cols=275 Identities=24% Similarity=0.332 Sum_probs=213.5
Q ss_pred CCCCCCceeeeecceEEEEEE-----cCCCcEEEEEEeccccccchhcHHHHHHHHHhcCCCCeeeEEEeec--cCCeeE
Q 002021 682 DGFSENNLIGRGGFGSVYKAS-----LGDGMEVAVKVFTSQCGRAFKSFDVECEIMKSIRHRNLIKVISSCS--NEEFKA 754 (979)
Q Consensus 682 ~~~~~~~~lG~G~~g~Vy~~~-----~~~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~--~~~~~~ 754 (979)
++|+..+.||+|+||.||+|+ ..+++.||||++........+.+.+|++++++++||||+++++++. +....+
T Consensus 23 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~ 102 (327)
T 3lxl_A 23 RHLKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYRGVSYGPGRQSLR 102 (327)
T ss_dssp GGEEEEEEEEEETTEEEEEEEECTTSSSCSEEEEEEEESSCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSSCEEE
T ss_pred hhhhhhhhccCCCCeEEEEEEeccCCCCcceEEEEEEeccCCHHHHHHHHHHHHHHHhcCCCceeEEEEEEecCCCceEE
Confidence 568888999999999999997 3468899999997665555677899999999999999999999875 556789
Q ss_pred EEEEecCCCccceeeccCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCEEeCCCCcEEEEeeccccccCC
Q 002021 755 LVLEYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFSIAKMLTG 834 (979)
Q Consensus 755 lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~i~H~Dik~~NIll~~~~~~kl~Dfg~~~~~~~ 834 (979)
+||||+++++|.+++......+++.+++.++.|++.||+||| +++|+||||||+||+++.++.+||+|||.+.....
T Consensus 103 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH---~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~~~~~~~ 179 (327)
T 3lxl_A 103 LVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQICKGMEYLG---SRRCVHRDLAARNILVESEAHVKIADFGLAKLLPL 179 (327)
T ss_dssp EEEECCTTCBHHHHHHHHGGGCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEEEETTEEEECCGGGCEECCT
T ss_pred EEEeecCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHH---hCCccCCCCChhhEEECCCCCEEEcccccceeccc
Confidence 999999999999999876667999999999999999999999 99999999999999999999999999999987653
Q ss_pred CCCc-ceecccccCCCCCCccccCCCCCCCchhHHHHHHHHHHHHcCCCCCcccccCcchHhHhhhhhcCCc-cchhhcc
Q 002021 835 EDQS-MIQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFTGKKPTDEIFNGEMTLKHWVNDWLPIS-TMEVVDA 912 (979)
Q Consensus 835 ~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~ 912 (979)
.... .......+|+.|+|||.+.+..+++++||||+|+++|||++|+.||.......... ........ ...+.+.
T Consensus 180 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~g~~p~~~~~~~~~~~---~~~~~~~~~~~~~~~~ 256 (327)
T 3lxl_A 180 DKDYYVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFTYCDKSCSPSAEFLRM---MGCERDVPALSRLLEL 256 (327)
T ss_dssp TCSEEECSSCCCSCGGGSCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHH---CC----CCHHHHHHHH
T ss_pred CCccceeeccCCccccccCHHHhccCCCChHHhHHHHHHHHHHHHhCCCCCccccchhhhh---cccccccccHHHHHHH
Confidence 3322 22234567888999999988889999999999999999999999986532111000 00000000 0000000
Q ss_pred cccCchhhhhHHHHHHHHHHHHHHHhccccCcCCCCCHHHHHHHHHHhHHhhc
Q 002021 913 NLLSQEDIHFVAKEQCVSFVFNLAMECTMEFPKQRINAKEIVTKLLKIRDSLL 965 (979)
Q Consensus 913 ~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~eil~~L~~~~~~~~ 965 (979)
. ........+..+++.+.+++.+||+.||++|||+.|++++|+++..+..
T Consensus 257 -~--~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~~~~~~ 306 (327)
T 3lxl_A 257 -L--EEGQRLPAPPACPAEVHELMKLCWAPSPQDRPSFSALGPQLDMLWSGSR 306 (327)
T ss_dssp -H--HTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHC-----
T ss_pred -h--hcccCCCCCCcccHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhhhc
Confidence 0 0001111234566789999999999999999999999999999876543
No 121
>2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ...
Probab=100.00 E-value=2e-39 Score=361.14 Aligned_cols=263 Identities=27% Similarity=0.438 Sum_probs=213.1
Q ss_pred hCCCCCCceeeeecceEEEEEEc--------CCCcEEEEEEecccc-ccchhcHHHHHHHHHhc-CCCCeeeEEEeeccC
Q 002021 681 TDGFSENNLIGRGGFGSVYKASL--------GDGMEVAVKVFTSQC-GRAFKSFDVECEIMKSI-RHRNLIKVISSCSNE 750 (979)
Q Consensus 681 ~~~~~~~~~lG~G~~g~Vy~~~~--------~~~~~vAvK~~~~~~-~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~ 750 (979)
.++|+..+.||+|+||.||+|.. .+++.||||++.... ....+.+.+|+++++++ +||||+++++++.+.
T Consensus 34 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~ 113 (334)
T 2pvf_A 34 RDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQD 113 (334)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEETTCSTTCC---CEEEEEECCTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSS
T ss_pred HhHeEEeeEEeecCceeEEEeEeccccccccccceEEEEeeeccCCcHHHHHHHHHHHHHHHHhhcCCCEeeEEEEEccC
Confidence 36788899999999999999964 356789999997543 23456788999999999 899999999999999
Q ss_pred CeeEEEEEecCCCccceeeccCC---------------CCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCEEe
Q 002021 751 EFKALVLEYMPHGSLEKYLYSSN---------------CILDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLL 815 (979)
Q Consensus 751 ~~~~lv~E~~~~g~L~~~l~~~~---------------~~l~~~~~~~i~~~ia~~L~~LH~~~~~~i~H~Dik~~NIll 815 (979)
+..++||||+++|+|.+++.... ..+++.+++.++.|++.||+||| +++|+||||||+||++
T Consensus 114 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH---~~~ivH~Dlkp~NIll 190 (334)
T 2pvf_A 114 GPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLA---SQKCIHRDLAARNVLV 190 (334)
T ss_dssp SCCEEEEECCTTCBHHHHHHTTSCTTCCSCC--------CCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEE
T ss_pred CceEEEEECCCCCcHHHHHHHhccccccccccccccccccCCHHHHHHHHHHHHHHHHHHH---hCCeeCCCCccceEEE
Confidence 99999999999999999987653 24899999999999999999999 9999999999999999
Q ss_pred CCCCcEEEEeeccccccCCCCCcceecccccCCCCCCccccCCCCCCCchhHHHHHHHHHHHHc-CCCCCcccccCcchH
Q 002021 816 DDNMVAHLSDFSIAKMLTGEDQSMIQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFT-GKKPTDEIFNGEMTL 894 (979)
Q Consensus 816 ~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~t-g~~P~~~~~~~~~~~ 894 (979)
+.++.+||+|||++................+|+.|+|||++.+..++.++||||+|+++|||++ |+.||...... ..
T Consensus 191 ~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~--~~ 268 (334)
T 2pvf_A 191 TENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVE--EL 268 (334)
T ss_dssp CTTCCEEECCCTTCEECTTTSSEECCSCCCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCCHH--HH
T ss_pred cCCCCEEEccccccccccccccccccCCCCcccceeChHHhcCCCcChHHHHHHHHHHHHHHHhCCCCCcCcCCHH--HH
Confidence 9999999999999987654433333344567889999999988889999999999999999999 99998653211 11
Q ss_pred hHhhhhhcCCccchhhcccccCchhhhhHHHHHHHHHHHHHHHhccccCcCCCCCHHHHHHHHHHhHHhhcc
Q 002021 895 KHWVNDWLPISTMEVVDANLLSQEDIHFVAKEQCVSFVFNLAMECTMEFPKQRINAKEIVTKLLKIRDSLLR 966 (979)
Q Consensus 895 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~eil~~L~~~~~~~~~ 966 (979)
...+..... ...+..++..+.+++.+||+.||.+|||+.|++++|+++......
T Consensus 269 ~~~~~~~~~------------------~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~l~~~~~~ 322 (334)
T 2pvf_A 269 FKLLKEGHR------------------MDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRILTLTTN 322 (334)
T ss_dssp HHHHHHTCC------------------CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHHC-
T ss_pred HHHHhcCCC------------------CCCCccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHhcccc
Confidence 111110000 001123556789999999999999999999999999999886543
No 122
>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} SCOP: d.144.1.0
Probab=100.00 E-value=2.4e-39 Score=349.24 Aligned_cols=251 Identities=27% Similarity=0.425 Sum_probs=195.0
Q ss_pred hCCCCCCceeeeecceEEEEEEcCCCcEEEEEEeccccc----cchhcHHHHHHHHHhcCCCCeeeEEEeeccCCeeEEE
Q 002021 681 TDGFSENNLIGRGGFGSVYKASLGDGMEVAVKVFTSQCG----RAFKSFDVECEIMKSIRHRNLIKVISSCSNEEFKALV 756 (979)
Q Consensus 681 ~~~~~~~~~lG~G~~g~Vy~~~~~~~~~vAvK~~~~~~~----~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 756 (979)
.++|+..+.||+|+||.||+|.. .++.||||++..... ...+.+.+|+++++.++||||+++++++.+++..++|
T Consensus 6 ~~~~~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 84 (271)
T 3dtc_A 6 FAELTLEEIIGIGGFGKVYRAFW-IGDEVAVKAARHDPDEDISQTIENVRQEAKLFAMLKHPNIIALRGVCLKEPNLCLV 84 (271)
T ss_dssp TTSEEEEEEEEEETTEEEEEEEE-TTEEEEEEEC----------CHHHHHHHHHHHHHCCCTTBCCEEEEECCC--CEEE
T ss_pred hhheeeeeeeccCCCeEEEEEEE-cCCeEEEEEEecCCcccHHHHHHHHHHHHHHHHhcCCCCEeeEEEEEecCCceEEE
Confidence 35788899999999999999987 489999999865432 2346788999999999999999999999999999999
Q ss_pred EEecCCCccceeeccCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCC---eEecCCCCCCEEeCC--------CCcEEEEe
Q 002021 757 LEYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGYSAP---VIHCDLKPSNVLLDD--------NMVAHLSD 825 (979)
Q Consensus 757 ~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~---i~H~Dik~~NIll~~--------~~~~kl~D 825 (979)
|||+++++|.+++... .+++..++.++.|++.|++||| +++ |+||||||+||+++. ++.+||+|
T Consensus 85 ~e~~~~~~L~~~~~~~--~~~~~~~~~i~~~l~~~l~~lH---~~~~~~i~H~dikp~Nil~~~~~~~~~~~~~~~kl~D 159 (271)
T 3dtc_A 85 MEFARGGPLNRVLSGK--RIPPDILVNWAVQIARGMNYLH---DEAIVPIIHRDLKSSNILILQKVENGDLSNKILKITD 159 (271)
T ss_dssp EECCTTEEHHHHHTSS--CCCHHHHHHHHHHHHHHHHHHH---HSSSSCCCCSCCSGGGEEESSCCSSSCCSSCCEEECC
T ss_pred EEcCCCCCHHHHhhcC--CCCHHHHHHHHHHHHHHHHHHH---hCCCCceeecCCchHHEEEecccccccccCcceEEcc
Confidence 9999999999998643 6899999999999999999999 777 999999999999986 77899999
Q ss_pred eccccccCCCCCcceecccccCCCCCCccccCCCCCCCchhHHHHHHHHHHHHcCCCCCcccccCcchHhHhhhhhcCCc
Q 002021 826 FSIAKMLTGEDQSMIQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFTGKKPTDEIFNGEMTLKHWVNDWLPIS 905 (979)
Q Consensus 826 fg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~ 905 (979)
||.+........ ....||+.|+|||.+.+..+++++||||+|+++|||++|+.||............ ....
T Consensus 160 fg~~~~~~~~~~----~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~-~~~~---- 230 (271)
T 3dtc_A 160 FGLAREWHRTTK----MSAAGAYAWMAPEVIRASMFSKGSDVWSYGVLLWELLTGEVPFRGIDGLAVAYGV-AMNK---- 230 (271)
T ss_dssp CCC-----------------CCGGGSCHHHHHHCCCSHHHHHHHHHHHHHHHHHCCCTTTTSCHHHHHHHH-HTSC----
T ss_pred CCcccccccccc----cCCCCccceeCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHhh-hcCC----
Confidence 999986543221 2456899999999998888999999999999999999999999753221111100 0000
Q ss_pred cchhhcccccCchhhhhHHHHHHHHHHHHHHHhccccCcCCCCCHHHHHHHHHHh
Q 002021 906 TMEVVDANLLSQEDIHFVAKEQCVSFVFNLAMECTMEFPKQRINAKEIVTKLLKI 960 (979)
Q Consensus 906 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~eil~~L~~~ 960 (979)
.....+..+++.+.+++.+||+.||++|||+.|++++|+++
T Consensus 231 --------------~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~L~~l 271 (271)
T 3dtc_A 231 --------------LALPIPSTCPEPFAKLMEDCWNPDPHSRPSFTNILDQLTTI 271 (271)
T ss_dssp --------------CCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHC-
T ss_pred --------------CCCCCCcccCHHHHHHHHHHhcCCcccCcCHHHHHHHHhcC
Confidence 00011224456799999999999999999999999999864
No 123
>2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens}
Probab=100.00 E-value=1.2e-39 Score=370.41 Aligned_cols=262 Identities=22% Similarity=0.273 Sum_probs=210.0
Q ss_pred HHHHHHhhCCCCCCceeeeecceEEEEEEc-CCCcEEEEEEecccc---ccchhcHHHHHHHHHhcCCCCeeeEEEeecc
Q 002021 674 YLELCRATDGFSENNLIGRGGFGSVYKASL-GDGMEVAVKVFTSQC---GRAFKSFDVECEIMKSIRHRNLIKVISSCSN 749 (979)
Q Consensus 674 ~~~~~~~~~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vAvK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~ 749 (979)
+.+.....++|+..+.||+|+||.||+|+. .+|+.||||++.+.. ....+.+.+|++++..++||||+++++++.+
T Consensus 53 ~~~~~~~~~~f~~~~~lG~G~fG~V~~~~~~~~~~~vAiK~l~k~~~~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~~~~ 132 (412)
T 2vd5_A 53 LKEVRLQRDDFEILKVIGRGAFSEVAVVKMKQTGQVYAMKIMNKWDMLKRGEVSCFREERDVLVNGDRRWITQLHFAFQD 132 (412)
T ss_dssp HHHHSCCGGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHHGGGCCHHHHHHHHHHSCTTTBCCEEEEEEC
T ss_pred hhhccCChhhEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhcCCCCeeeEEEEEee
Confidence 344445568899999999999999999954 579999999986532 2345678999999999999999999999999
Q ss_pred CCeeEEEEEecCCCccceeeccCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCEEeCCCCcEEEEeeccc
Q 002021 750 EEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFSIA 829 (979)
Q Consensus 750 ~~~~~lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~i~H~Dik~~NIll~~~~~~kl~Dfg~~ 829 (979)
++..|+||||+++|+|.+++.+.+..+++..++.++.||+.||+||| +++|+||||||+||+++.++.+||+|||++
T Consensus 133 ~~~~~lVmE~~~gg~L~~~l~~~~~~l~~~~~~~~~~qi~~aL~~LH---~~giiHrDLKp~NILld~~g~vkL~DFGla 209 (412)
T 2vd5_A 133 ENYLYLVMEYYVGGDLLTLLSKFGERIPAEMARFYLAEIVMAIDSVH---RLGYVHRDIKPDNILLDRCGHIRLADFGSC 209 (412)
T ss_dssp SSEEEEEECCCCSCBHHHHHHHHSSCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECTTSCEEECCCTTC
T ss_pred CCEEEEEEcCCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH---HCCeeecccCHHHeeecCCCCEEEeechhh
Confidence 99999999999999999999876567999999999999999999999 999999999999999999999999999999
Q ss_pred cccCCCCCcceecccccCCCCCCccccC-------CCCCCCchhHHHHHHHHHHHHcCCCCCcccccCcchHhHhhhhhc
Q 002021 830 KMLTGEDQSMIQTQTLATIGYMAPEYGR-------EGRVSANGDVYSFGIMLMETFTGKKPTDEIFNGEMTLKHWVNDWL 902 (979)
Q Consensus 830 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~-------~~~~~~~~DvwslG~il~el~tg~~P~~~~~~~~~~~~~~~~~~~ 902 (979)
+...... .......+||+.|+|||++. ...++.++||||+||++|||++|+.||......+ .+...+....
T Consensus 210 ~~~~~~~-~~~~~~~~Gt~~Y~APE~l~~~~~~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~~~-~~~~i~~~~~ 287 (412)
T 2vd5_A 210 LKLRADG-TVRSLVAVGTPDYLSPEILQAVGGGPGTGSYGPECDWWALGVFAYEMFYGQTPFYADSTAE-TYGKIVHYKE 287 (412)
T ss_dssp EECCTTS-CEECSSCCSCGGGCCHHHHHHHHTCTTCSEECTHHHHHHHHHHHHHHHHSSCTTCCSSHHH-HHHHHHTHHH
T ss_pred eeccCCC-ccccceeccccCcCCHHHHhhcccCcCCCCCChHHhhhHHhHHHHHHHhCCCCCCCCCHHH-HHHHHHhccc
Confidence 8764332 22223467999999999886 4578999999999999999999999997532111 1111111000
Q ss_pred CCccchhhcccccCchhhhhHHHHHHHHHHHHHHHhccccCcCCC---CCHHHHHHH
Q 002021 903 PISTMEVVDANLLSQEDIHFVAKEQCVSFVFNLAMECTMEFPKQR---INAKEIVTK 956 (979)
Q Consensus 903 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~R---ps~~eil~~ 956 (979)
. ... ......+++++.+++.+|+. +|++| |+++|+++|
T Consensus 288 ~-----------~~~----p~~~~~~s~~~~dli~~lL~-~p~~Rlgr~~~~ei~~H 328 (412)
T 2vd5_A 288 H-----------LSL----PLVDEGVPEEARDFIQRLLC-PPETRLGRGGAGDFRTH 328 (412)
T ss_dssp H-----------CCC----C----CCCHHHHHHHHTTSS-CGGGCTTTTTHHHHHTS
T ss_pred C-----------cCC----CccccCCCHHHHHHHHHHcC-ChhhcCCCCCHHHHhcC
Confidence 0 000 00123456779999999999 99998 599999876
No 124
>1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7
Probab=100.00 E-value=2.4e-39 Score=356.45 Aligned_cols=245 Identities=24% Similarity=0.303 Sum_probs=204.4
Q ss_pred CCCCCCceeeeecceEEEEEE-cCCCcEEEEEEecccc---ccchhcHHHHHHHHHhcCCCCeeeEEEeeccCCeeEEEE
Q 002021 682 DGFSENNLIGRGGFGSVYKAS-LGDGMEVAVKVFTSQC---GRAFKSFDVECEIMKSIRHRNLIKVISSCSNEEFKALVL 757 (979)
Q Consensus 682 ~~~~~~~~lG~G~~g~Vy~~~-~~~~~~vAvK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 757 (979)
++|+..+.||+|+||.||+|. ..+|+.||+|++.... ....+.+.+|+.+++.++||||+++++++.+.+..++||
T Consensus 6 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~~lv~ 85 (318)
T 1fot_A 6 QDFQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHPFIIRMWGTFQDAQQIFMIM 85 (318)
T ss_dssp GGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCBTTBCCEEEEEECSSEEEEEE
T ss_pred HHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHhhCCCCCCceEeEEEEeCCEEEEEE
Confidence 578889999999999999995 4579999999987542 234566788999999999999999999999999999999
Q ss_pred EecCCCccceeeccCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCEEeCCCCcEEEEeeccccccCCCCC
Q 002021 758 EYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFSIAKMLTGEDQ 837 (979)
Q Consensus 758 E~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~i~H~Dik~~NIll~~~~~~kl~Dfg~~~~~~~~~~ 837 (979)
||+++|+|.+++.... .+++..++.++.||+.||+||| +++|+||||||+||+++.++.+||+|||+++.....
T Consensus 86 e~~~gg~L~~~l~~~~-~~~~~~~~~~~~qi~~aL~~LH---~~~ivHrDlkp~NIll~~~g~~kL~Dfg~a~~~~~~-- 159 (318)
T 1fot_A 86 DYIEGGELFSLLRKSQ-RFPNPVAKFYAAEVCLALEYLH---SKDIIYRDLKPENILLDKNGHIKITDFGFAKYVPDV-- 159 (318)
T ss_dssp CCCCSCBHHHHHHHTS-SCCHHHHHHHHHHHHHHHHHHH---TTTEECCCCCGGGEEECTTSCEEECCCSSCEECSSC--
T ss_pred eCCCCCCHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHH---HCCccccCCChheEEEcCCCCEEEeecCcceecCCc--
Confidence 9999999999997654 6899999999999999999999 999999999999999999999999999999875322
Q ss_pred cceecccccCCCCCCccccCCCCCCCchhHHHHHHHHHHHHcCCCCCcccccCcchHhHhhhhhcCCccchhhcccccCc
Q 002021 838 SMIQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFTGKKPTDEIFNGEMTLKHWVNDWLPISTMEVVDANLLSQ 917 (979)
Q Consensus 838 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 917 (979)
....+||+.|+|||++.+..++.++||||+||++|||++|+.||...... ..+...... ..
T Consensus 160 ---~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~-~~~~~i~~~------------~~--- 220 (318)
T 1fot_A 160 ---TYTLCGTPDYIAPEVVSTKPYNKSIDWWSFGILIYEMLAGYTPFYDSNTM-KTYEKILNA------------EL--- 220 (318)
T ss_dssp ---BCCCCSCTTTCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCSSHH-HHHHHHHHC------------CC---
T ss_pred ---cccccCCccccCHhHhcCCCCCcccchhhhHHHHHHHHhCCCCCCCCCHH-HHHHHHHhC------------CC---
Confidence 23457999999999999999999999999999999999999999652211 111111110 00
Q ss_pred hhhhhHHHHHHHHHHHHHHHhccccCcCCCC-----CHHHHHHH
Q 002021 918 EDIHFVAKEQCVSFVFNLAMECTMEFPKQRI-----NAKEIVTK 956 (979)
Q Consensus 918 ~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rp-----s~~eil~~ 956 (979)
..+..++.++.+++.+|++.||++|| +++|+++|
T Consensus 221 -----~~p~~~~~~~~~li~~lL~~dp~~R~~~~~~~~~~i~~h 259 (318)
T 1fot_A 221 -----RFPPFFNEDVKDLLSRLITRDLSQRLGNLQNGTEDVKNH 259 (318)
T ss_dssp -----CCCTTSCHHHHHHHHHHTCSCTTTCTTSSTTTTHHHHTS
T ss_pred -----CCCCCCCHHHHHHHHHHhccCHHHcCCCcCCCHHHHhcC
Confidence 00123456689999999999999999 89999876
No 125
>2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A*
Probab=100.00 E-value=1.6e-39 Score=361.97 Aligned_cols=266 Identities=23% Similarity=0.360 Sum_probs=214.6
Q ss_pred HHhhCCCCCCceeeeecceEEEEEEcC-C-----CcEEEEEEeccccc-cchhcHHHHHHHHHhc-CCCCeeeEEEeecc
Q 002021 678 CRATDGFSENNLIGRGGFGSVYKASLG-D-----GMEVAVKVFTSQCG-RAFKSFDVECEIMKSI-RHRNLIKVISSCSN 749 (979)
Q Consensus 678 ~~~~~~~~~~~~lG~G~~g~Vy~~~~~-~-----~~~vAvK~~~~~~~-~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~ 749 (979)
....++|+..+.||+|+||.||+|... + +..||||++..... ...+.+.+|+++++.+ +||||+++++++.+
T Consensus 42 ~~~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~ 121 (333)
T 2i1m_A 42 EFPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACTH 121 (333)
T ss_dssp BCCTTSEEEEEEEEECSSEEEEEEEETTCSSSCCCCEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECS
T ss_pred cCCHHHceeeeEeccCCCcceEEEEecCCCcccchhHHHHHhcccccChHHHHHHHHHHHHHHhhcCCCCeeeEEEEEec
Confidence 334577889999999999999999642 2 34799999875532 3456788999999999 89999999999999
Q ss_pred CCeeEEEEEecCCCccceeeccC-------------CCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCEEeC
Q 002021 750 EEFKALVLEYMPHGSLEKYLYSS-------------NCILDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLD 816 (979)
Q Consensus 750 ~~~~~lv~E~~~~g~L~~~l~~~-------------~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~i~H~Dik~~NIll~ 816 (979)
++..++||||+++|+|.+++... ...+++..++.++.|++.||+||| +++|+||||||+||+++
T Consensus 122 ~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH---~~~ivH~Dlkp~NIl~~ 198 (333)
T 2i1m_A 122 GGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTASTRDLLHFSSQVAQGMAFLA---SKNCIHRDVAARNVLLT 198 (333)
T ss_dssp SSSCEEEEECCTTEEHHHHHHHHHHHHSCC-------CCCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGCEEE
T ss_pred CCceEEEEecCCCCcHHHHHHHhcccccccccccccccccCHHHHHHHHHHHHHHHHHHh---cCCcccCCcccceEEEC
Confidence 99999999999999999998653 235799999999999999999999 89999999999999999
Q ss_pred CCCcEEEEeeccccccCCCCCcceecccccCCCCCCccccCCCCCCCchhHHHHHHHHHHHHc-CCCCCcccccCcchHh
Q 002021 817 DNMVAHLSDFSIAKMLTGEDQSMIQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFT-GKKPTDEIFNGEMTLK 895 (979)
Q Consensus 817 ~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~t-g~~P~~~~~~~~~~~~ 895 (979)
.++.+||+|||++................+|+.|+|||.+.+..++.++||||||+++|||+| |..||........ ..
T Consensus 199 ~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~~-~~ 277 (333)
T 2i1m_A 199 NGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPYPGILVNSK-FY 277 (333)
T ss_dssp GGGEEEBCCCGGGCCGGGCTTSEECSSCEECGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCSSHH-HH
T ss_pred CCCeEEECccccccccccccceeecCCCCCCccccCHHHhccCCCChHHHHHHHHHHHHHHHcCCCCCCcccchhHH-HH
Confidence 999999999999987654433333445567889999999988889999999999999999999 9999875332211 11
Q ss_pred HhhhhhcCCccchhhcccccCchhhhhHHHHHHHHHHHHHHHhccccCcCCCCCHHHHHHHHHHhHHhhc
Q 002021 896 HWVNDWLPISTMEVVDANLLSQEDIHFVAKEQCVSFVFNLAMECTMEFPKQRINAKEIVTKLLKIRDSLL 965 (979)
Q Consensus 896 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~eil~~L~~~~~~~~ 965 (979)
..+..... ...+..++..+.+++.+||+.||.+|||+.|++++|+++.....
T Consensus 278 ~~~~~~~~------------------~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~L~~~~~~~~ 329 (333)
T 2i1m_A 278 KLVKDGYQ------------------MAQPAFAPKNIYSIMQACWALEPTHRPTFQQICSFLQEQAQEDR 329 (333)
T ss_dssp HHHHHTCC------------------CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHHH
T ss_pred HHHhcCCC------------------CCCCCCCCHHHHHHHHHHhccChhhCcCHHHHHHHHHHHHHhhh
Confidence 11111100 00112335668999999999999999999999999999887543
No 126
>2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens}
Probab=100.00 E-value=2e-38 Score=371.47 Aligned_cols=345 Identities=22% Similarity=0.199 Sum_probs=246.5
Q ss_pred eeeccCCCCcCCCcccccCCCCCcCEEEccCCccccccCcccccCCCCcEEeccccccccccCccccccccccceecccc
Q 002021 228 ILGLQDNSLSGCLSSIGYARLPNLEILSLWGNNFSGTIPRFIFNASKLSILDLEGNSFSGFIPNTFGNLRNLSWLVLSDN 307 (979)
Q Consensus 228 ~L~L~~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N 307 (979)
.++++++.++.++... .+++++|+|++|++++..|..|.++++|++|+|++|.+++..|..|.++++|++|+|++|
T Consensus 15 ~v~c~~~~l~~ip~~~----~~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n 90 (477)
T 2id5_A 15 AVLCHRKRFVAVPEGI----PTETRLLDLGKNRIKTLNQDEFASFPHLEELELNENIVSAVEPGAFNNLFNLRTLGLRSN 90 (477)
T ss_dssp EEECCSCCCSSCCSCC----CTTCSEEECCSSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSS
T ss_pred EEEeCCCCcCcCCCCC----CCCCcEEECCCCccceECHhHccCCCCCCEEECCCCccCEeChhhhhCCccCCEEECCCC
Confidence 4455555555443321 246677777777777666667777777777777777777766777777777777777777
Q ss_pred ccccccchhhhhhcccCCCCccEEEccCCCCcccCCccccccccccccEEEccCccccCCCCccccCCCcccEEEecCCC
Q 002021 308 YLTSSTQELSFLSSLSNCKFLKYFDLSYNPLYRILPRTTVGNLSHSLEEFKMSNCNISGGIPEEISNLTNLRTIYLGGNK 387 (979)
Q Consensus 308 ~l~~~~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~~L~~L~L~~n~i~~~~p~~l~~l~~L~~L~L~~N~ 387 (979)
+++.++.. .+.++++|++|+|++|++.. ..+..|..+++|++|+|++|.
T Consensus 91 ~l~~~~~~-----~~~~l~~L~~L~Ls~n~i~~--------------------------~~~~~~~~l~~L~~L~l~~n~ 139 (477)
T 2id5_A 91 RLKLIPLG-----VFTGLSNLTKLDISENKIVI--------------------------LLDYMFQDLYNLKSLEVGDND 139 (477)
T ss_dssp CCCSCCTT-----SSTTCTTCCEEECTTSCCCE--------------------------ECTTTTTTCTTCCEEEECCTT
T ss_pred cCCccCcc-----cccCCCCCCEEECCCCcccc--------------------------CChhHccccccCCEEECCCCc
Confidence 77665543 24555555555555555443 344556666666777777776
Q ss_pred CCchhHHhhhcCCCCcEEEecCcccCCCccccccCCCCCceEecCCCcccccCCccccCCCcCceEecCCCccc-ccccc
Q 002021 388 LNGSILITLSKLQKLQDLGLKDNKLEGSIPYDICNLAELYRLDLDGNKLSGSIPACFSNLTSLRIVSLGSNELT-SIPLT 466 (979)
Q Consensus 388 l~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~-~lp~~ 466 (979)
+++..+..|..+++|+.|++++|.+++..+..+.++++|+.|++++|.+.+..+..|..+++|+.|++++|.+. .+|..
T Consensus 140 l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~l~~~~~~~~~~~~ 219 (477)
T 2id5_A 140 LVYISHRAFSGLNSLEQLTLEKCNLTSIPTEALSHLHGLIVLRLRHLNINAIRDYSFKRLYRLKVLEISHWPYLDTMTPN 219 (477)
T ss_dssp CCEECTTSSTTCTTCCEEEEESCCCSSCCHHHHTTCTTCCEEEEESCCCCEECTTCSCSCTTCCEEEEECCTTCCEECTT
T ss_pred cceeChhhccCCCCCCEEECCCCcCcccChhHhcccCCCcEEeCCCCcCcEeChhhcccCcccceeeCCCCccccccCcc
Confidence 66666666666777777777777776655566677777777777777777666667777777777777776543 56666
Q ss_pred ccCcCCCcEEEeccccccCCCccccccccccceEeccCCccCcccchhhcCCcccceeecCCccccCCCCCccccccccc
Q 002021 467 FWNLKDILNLNFSSNFLTGSLPLEIGSLKVLVGIDLSRNNFSGVIPTEIGGLKNLEYLFLGYNRLQGSIPNSFGDLISLK 546 (979)
Q Consensus 467 ~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~ 546 (979)
.....+|+.|++++|++++..+..+..+++|+.|+|++|++++..+..|.++++|+.|+|++|++++..|..|.++++|+
T Consensus 220 ~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~ 299 (477)
T 2id5_A 220 CLYGLNLTSLSITHCNLTAVPYLAVRHLVYLRFLNLSYNPISTIEGSMLHELLRLQEIQLVGGQLAVVEPYAFRGLNYLR 299 (477)
T ss_dssp TTTTCCCSEEEEESSCCCSCCHHHHTTCTTCCEEECCSSCCCEECTTSCTTCTTCCEEECCSSCCSEECTTTBTTCTTCC
T ss_pred cccCccccEEECcCCcccccCHHHhcCccccCeeECCCCcCCccChhhccccccCCEEECCCCccceECHHHhcCcccCC
Confidence 66666788888888888865556788888888888888888888888888889999999999999888888888999999
Q ss_pred ccccccccccccCCccccCccccCeEeccCCcccccCCCCCCCCCcccccccCCccccCCC
Q 002021 547 FLNLSNNNLSGVIPASLEKLSYLEDLNLSFNQLEGKIPRGGSFGNFSAQSFEGNELLCGSP 607 (979)
Q Consensus 547 ~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~~~~~~~~~~N~~~c~~p 607 (979)
.|+|++|+|++..+..|..+++|+.|+|++|+|+|..+....+.......+.++...|..|
T Consensus 300 ~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~c~c~~~~~~~~~~~~~~~~~~~~C~~p 360 (477)
T 2id5_A 300 VLNVSGNQLTTLEESVFHSVGNLETLILDSNPLACDCRLLWVFRRRWRLNFNRQQPTCATP 360 (477)
T ss_dssp EEECCSSCCSCCCGGGBSCGGGCCEEECCSSCEECSGGGHHHHTTTTSSCCTTCCCBEEES
T ss_pred EEECCCCcCceeCHhHcCCCcccCEEEccCCCccCccchHhHHhhhhccccCccCceeCCc
Confidence 9999999998877778888999999999999998876543223333446677888888766
No 127
>2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens}
Probab=100.00 E-value=3.3e-39 Score=360.94 Aligned_cols=252 Identities=22% Similarity=0.293 Sum_probs=191.3
Q ss_pred hhCCCCCCceeeeecceEEEEEEc-CCCcEEEEEEeccccccchhcHHHHHHHHHhcCCCCeeeEEEeeccCCeeEEEEE
Q 002021 680 ATDGFSENNLIGRGGFGSVYKASL-GDGMEVAVKVFTSQCGRAFKSFDVECEIMKSIRHRNLIKVISSCSNEEFKALVLE 758 (979)
Q Consensus 680 ~~~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~E 758 (979)
..+.|+..+.||+|+||.||+|.. .+++.||||++.... ..+.+.+|++++++++||||+++++++.+++..++|||
T Consensus 51 ~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 128 (349)
T 2w4o_A 51 LSDFFEVESELGRGATSIVYRCKQKGTQKPYALKVLKKTV--DKKIVRTEIGVLLRLSHPNIIKLKEIFETPTEISLVLE 128 (349)
T ss_dssp GGGTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEC------------CHHHHHCCCTTBCCEEEEEECSSEEEEEEC
T ss_pred ccCcEEEeeEEeeCCCEEEEEEEECCCCcEEEEEEeccch--hHHHHHHHHHHHHhCCCCCCcceeeeEecCCeEEEEEE
Confidence 346788999999999999999965 468899999987543 34668889999999999999999999999999999999
Q ss_pred ecCCCccceeeccCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCEEeCC---CCcEEEEeeccccccCCC
Q 002021 759 YMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDD---NMVAHLSDFSIAKMLTGE 835 (979)
Q Consensus 759 ~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~i~H~Dik~~NIll~~---~~~~kl~Dfg~~~~~~~~ 835 (979)
|+++|+|.+++...+ .+++.+++.++.|++.||+||| +++|+||||||+||+++. ++.+||+|||+++.....
T Consensus 129 ~~~~~~L~~~l~~~~-~~~~~~~~~i~~qi~~~L~~LH---~~~ivH~Dikp~NIll~~~~~~~~~kl~Dfg~a~~~~~~ 204 (349)
T 2w4o_A 129 LVTGGELFDRIVEKG-YYSERDAADAVKQILEAVAYLH---ENGIVHRDLKPENLLYATPAPDAPLKIADFGLSKIVEHQ 204 (349)
T ss_dssp CCCSCBHHHHHTTCS-SCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEESSSSTTCCEEECCCC--------
T ss_pred eCCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---HCCeEecCCCcccEEEecCCCCCCEEEccCccccccCcc
Confidence 999999999987653 5899999999999999999999 899999999999999975 889999999999865422
Q ss_pred CCcceecccccCCCCCCccccCCCCCCCchhHHHHHHHHHHHHcCCCCCcccccCcchHhHhhhhhcCCccchhhccccc
Q 002021 836 DQSMIQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFTGKKPTDEIFNGEMTLKHWVNDWLPISTMEVVDANLL 915 (979)
Q Consensus 836 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 915 (979)
. ......||+.|+|||++.+..+++++|||||||++|||++|+.||......+.............
T Consensus 205 ~---~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~i~~~~~~~----------- 270 (349)
T 2w4o_A 205 V---LMKTVCGTPGYCAPEILRGCAYGPEVDMWSVGIITYILLCGFEPFYDERGDQFMFRRILNCEYYF----------- 270 (349)
T ss_dssp -----------CGGGSCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCTTCHHHHHHHHHTTCCCC-----------
T ss_pred c---ccccccCCCCccCHHHhcCCCCCcccchHHHHHHHHHHHhCCCCCCCCcccHHHHHHHHhCCCcc-----------
Confidence 1 22345789999999999988999999999999999999999999965332221222111110000
Q ss_pred CchhhhhHHHHHHHHHHHHHHHhccccCcCCCCCHHHHHHH
Q 002021 916 SQEDIHFVAKEQCVSFVFNLAMECTMEFPKQRINAKEIVTK 956 (979)
Q Consensus 916 ~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~eil~~ 956 (979)
..+....++.++.+++.+|++.||++|||+.|+++|
T Consensus 271 -----~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~h 306 (349)
T 2w4o_A 271 -----ISPWWDEVSLNAKDLVRKLIVLDPKKRLTTFQALQH 306 (349)
T ss_dssp -----CTTTTTTSCHHHHHHHHTTSCSSGGGSCCHHHHHHS
T ss_pred -----CCchhhhCCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 001112345678999999999999999999999875
No 128
>4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens}
Probab=100.00 E-value=7.7e-39 Score=360.16 Aligned_cols=249 Identities=26% Similarity=0.333 Sum_probs=202.8
Q ss_pred CCCCCCceeeeecceEEEEEE-cCCCcEEEEEEecccc---ccchhcHHHHHHHHHhcCCCCeeeEEEeeccCCeeEEEE
Q 002021 682 DGFSENNLIGRGGFGSVYKAS-LGDGMEVAVKVFTSQC---GRAFKSFDVECEIMKSIRHRNLIKVISSCSNEEFKALVL 757 (979)
Q Consensus 682 ~~~~~~~~lG~G~~g~Vy~~~-~~~~~~vAvK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 757 (979)
++|+..+.||+|+||.||+|. ..+++.||+|++.... ....+.+.+|+++++.++||||+++++++.+.+..++||
T Consensus 15 ~~y~i~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~lv~ 94 (384)
T 4fr4_A 15 DHFEILRAIGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNEVRNVFKELQIMQGLEHPFLVNLWYSFQDEEDMFMVV 94 (384)
T ss_dssp GGEEEEEEEECCTTCCEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred HHeEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEehhhcccHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEEEEE
Confidence 578889999999999999995 5578999999986542 234567889999999999999999999999999999999
Q ss_pred EecCCCccceeeccCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCEEeCCCCcEEEEeeccccccCCCCC
Q 002021 758 EYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFSIAKMLTGEDQ 837 (979)
Q Consensus 758 E~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~i~H~Dik~~NIll~~~~~~kl~Dfg~~~~~~~~~~ 837 (979)
||+++|+|.+++... ..+++..++.++.|++.||+||| +++|+||||||+||+++.++.+||+|||++.......
T Consensus 95 e~~~gg~L~~~l~~~-~~l~~~~~~~~~~qi~~aL~~LH---~~givHrDlkp~NIll~~~g~vkL~DFG~a~~~~~~~- 169 (384)
T 4fr4_A 95 DLLLGGDLRYHLQQN-VHFKEETVKLFICELVMALDYLQ---NQRIIHRDMKPDNILLDEHGHVHITDFNIAAMLPRET- 169 (384)
T ss_dssp CCCTTEEHHHHHHTT-CCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECTTSCEEECCCTTCEECCTTC-
T ss_pred ecCCCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHH---HCCceeccCcHHHeEECCCCCEEEeccceeeeccCCC-
Confidence 999999999998765 36999999999999999999999 9999999999999999999999999999998764322
Q ss_pred cceecccccCCCCCCccccCC---CCCCCchhHHHHHHHHHHHHcCCCCCcccccCcchHhHhhhhhcCCccchhhcccc
Q 002021 838 SMIQTQTLATIGYMAPEYGRE---GRVSANGDVYSFGIMLMETFTGKKPTDEIFNGEMTLKHWVNDWLPISTMEVVDANL 914 (979)
Q Consensus 838 ~~~~~~~~gt~~y~aPE~~~~---~~~~~~~DvwslG~il~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 914 (979)
......||+.|+|||++.. ..++.++||||+||++|||++|+.||........ ........ ...
T Consensus 170 --~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~il~elltG~~Pf~~~~~~~~--~~~~~~~~---------~~~ 236 (384)
T 4fr4_A 170 --QITTMAGTKPYMAPEMFSSRKGAGYSFAVDWWSLGVTAYELLRGRRPYHIRSSTSS--KEIVHTFE---------TTV 236 (384)
T ss_dssp --CBCCCCSCGGGCCGGGTCCCSSCCBCTTHHHHHHHHHHHHHHHSSCSSCCCTTSCH--HHHHHHHH---------HCC
T ss_pred --ceeccCCCccccCCeeeccCCCCCCCccceeechHHHHHHHHhCCCCCCCCCCccH--HHHHHHHh---------hcc
Confidence 2345679999999999864 4589999999999999999999999975322211 11110000 000
Q ss_pred cCchhhhhHHHHHHHHHHHHHHHhccccCcCCCCC-HHHHHH
Q 002021 915 LSQEDIHFVAKEQCVSFVFNLAMECTMEFPKQRIN-AKEIVT 955 (979)
Q Consensus 915 ~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps-~~eil~ 955 (979)
...+..++..+.+++.+||+.||++||+ ++++++
T Consensus 237 -------~~~p~~~s~~~~~li~~lL~~dP~~R~s~~~~l~~ 271 (384)
T 4fr4_A 237 -------VTYPSAWSQEMVSLLKKLLEPNPDQRFSQLSDVQN 271 (384)
T ss_dssp -------CCCCTTSCHHHHHHHHHHSCSSGGGSCCSHHHHHT
T ss_pred -------cCCCCcCCHHHHHHHHHHhcCCHhHhcccHHHHHc
Confidence 0011234567899999999999999998 777665
No 129
>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ...
Probab=100.00 E-value=9.8e-40 Score=378.21 Aligned_cols=262 Identities=26% Similarity=0.421 Sum_probs=209.5
Q ss_pred hCCCCCCceeeeecceEEEEEEcCCCcEEEEEEeccccccchhcHHHHHHHHHhcCCCCeeeEEEeeccCCeeEEEEEec
Q 002021 681 TDGFSENNLIGRGGFGSVYKASLGDGMEVAVKVFTSQCGRAFKSFDVECEIMKSIRHRNLIKVISSCSNEEFKALVLEYM 760 (979)
Q Consensus 681 ~~~~~~~~~lG~G~~g~Vy~~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~E~~ 760 (979)
.++|+..+.||+|+||.||+|.+.++..||||+++... ...+.+.+|++++++++||||+++++++.+ +..++||||+
T Consensus 183 ~~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~-~~~~iv~e~~ 260 (452)
T 1fmk_A 183 RESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVTEYM 260 (452)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEETTTEEEEEEECCTTS-SCHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCEEEECCC
T ss_pred hhHceeeeeecCCCCeEEEEEEECCCceEEEEEeccCC-CCHHHHHHHHHHHHhCCCCCEeeEEEEEcC-CceEEEehhh
Confidence 45678889999999999999988878889999997543 345678999999999999999999999876 6789999999
Q ss_pred CCCccceeeccC-CCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCEEeCCCCcEEEEeeccccccCCCCCcc
Q 002021 761 PHGSLEKYLYSS-NCILDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFSIAKMLTGEDQSM 839 (979)
Q Consensus 761 ~~g~L~~~l~~~-~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~i~H~Dik~~NIll~~~~~~kl~Dfg~~~~~~~~~~~~ 839 (979)
++|+|.+++... ...+++.+++.++.|++.||+||| +++|+||||||+||++++++.+||+|||+++...... ..
T Consensus 261 ~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~LH---~~~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~-~~ 336 (452)
T 1fmk_A 261 SKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVE---RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNE-YT 336 (452)
T ss_dssp TTCBHHHHHSHHHHTTCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEECGGGCEEECCCCTTC---------
T ss_pred cCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHH---hCCeeCCCCChhhEEECCCCCEEECCCccceecCCCc-ee
Confidence 999999999753 345899999999999999999999 9999999999999999999999999999998764322 12
Q ss_pred eecccccCCCCCCccccCCCCCCCchhHHHHHHHHHHHHc-CCCCCcccccCcchHhHhhhhhcCCccchhhcccccCch
Q 002021 840 IQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFT-GKKPTDEIFNGEMTLKHWVNDWLPISTMEVVDANLLSQE 918 (979)
Q Consensus 840 ~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~t-g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 918 (979)
......+++.|+|||.+.++.++.++||||||+++|||++ |+.||......+ ....+...
T Consensus 337 ~~~~~~~~~~y~aPE~~~~~~~~~~sDvwslG~~l~el~t~g~~P~~~~~~~~--~~~~i~~~----------------- 397 (452)
T 1fmk_A 337 ARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNRE--VLDQVERG----------------- 397 (452)
T ss_dssp ------CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCHHH--HHHHHHTT-----------------
T ss_pred cccCCcccccccCHhHHhcCCCCccccHHhHHHHHHHHHhCCCCCCCCCCHHH--HHHHHHcC-----------------
Confidence 2234457789999999988899999999999999999999 999986532211 11111000
Q ss_pred hhhhHHHHHHHHHHHHHHHhccccCcCCCCCHHHHHHHHHHhHHhhccCC
Q 002021 919 DIHFVAKEQCVSFVFNLAMECTMEFPKQRINAKEIVTKLLKIRDSLLRNV 968 (979)
Q Consensus 919 ~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~eil~~L~~~~~~~~~~~ 968 (979)
.+.+.+..++..+.++|.+||+.||++|||++++++.|+++..+..+++
T Consensus 398 -~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~~l~~~L~~~~~~~~~~~ 446 (452)
T 1fmk_A 398 -YRMPCPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYFTSTEPQY 446 (452)
T ss_dssp -CCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTTTSCSCCCC
T ss_pred -CCCCCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHhccCCccc
Confidence 0111223566779999999999999999999999999999887655544
No 130
>4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A*
Probab=100.00 E-value=1.8e-39 Score=353.77 Aligned_cols=252 Identities=23% Similarity=0.335 Sum_probs=204.9
Q ss_pred CCCCCCceeeeecceEEEEEEcC-CC-------cEEEEEEeccccccchhcHHHHHHHHHhcCCCCeeeEEEeeccCCee
Q 002021 682 DGFSENNLIGRGGFGSVYKASLG-DG-------MEVAVKVFTSQCGRAFKSFDVECEIMKSIRHRNLIKVISSCSNEEFK 753 (979)
Q Consensus 682 ~~~~~~~~lG~G~~g~Vy~~~~~-~~-------~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~ 753 (979)
++|+..+.||+|+||.||+|... ++ ..||+|++........+.+.+|+++++.++||||+++++++.+++..
T Consensus 8 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~ 87 (289)
T 4fvq_A 8 EDLIFNESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASMMSKLSHKHLVLNYGVCVCGDEN 87 (289)
T ss_dssp GGEEEEEEEEEETTEEEEEEEEEEECGGGCEEEEEEEEEEECGGGGGGHHHHHHHHHHHHTSCCTTBCCEEEEECCTTCC
T ss_pred hHeeeeeeeccCCCceEEEEEEecccccccccchhhhhhhcccccHHHHHHHHHHHHHHHhCCCCCEeEEEEEEEeCCCC
Confidence 56888899999999999999543 33 57999999766556667899999999999999999999999999999
Q ss_pred EEEEEecCCCccceeeccCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCEEeCCCCc--------EEEEe
Q 002021 754 ALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMV--------AHLSD 825 (979)
Q Consensus 754 ~lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~i~H~Dik~~NIll~~~~~--------~kl~D 825 (979)
++||||+++|+|.+++......+++..++.++.|++.||+||| +++|+||||||+||+++.++. +||+|
T Consensus 88 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~LH---~~~ivH~Dlkp~NIll~~~~~~~~~~~~~~kl~D 164 (289)
T 4fvq_A 88 ILVQEFVKFGSLDTYLKKNKNCINILWKLEVAKQLAAAMHFLE---ENTLIHGNVCAKNILLIREEDRKTGNPPFIKLSD 164 (289)
T ss_dssp EEEEECCTTCBHHHHHHHTGGGCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEEEECCBGGGTBCCEEEECC
T ss_pred EEEEECCCCCCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHh---hCCeECCCcCcceEEEecCCcccccccceeeecc
Confidence 9999999999999999887767999999999999999999999 999999999999999998876 99999
Q ss_pred eccccccCCCCCcceecccccCCCCCCccccCC-CCCCCchhHHHHHHHHHHHHcCCCCCcccccCcchHhHhhhhhcCC
Q 002021 826 FSIAKMLTGEDQSMIQTQTLATIGYMAPEYGRE-GRVSANGDVYSFGIMLMETFTGKKPTDEIFNGEMTLKHWVNDWLPI 904 (979)
Q Consensus 826 fg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwslG~il~el~tg~~P~~~~~~~~~~~~~~~~~~~~~ 904 (979)
||.+...... ....+|+.|+|||.+.+ ..++.++||||+|+++|||++|..|+............ ......
T Consensus 165 fg~~~~~~~~------~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~~~~~~~~~~~~~~~-~~~~~~- 236 (289)
T 4fvq_A 165 PGISITVLPK------DILQERIPWVPPECIENPKNLNLATDKWSFGTTLWEICSGGDKPLSALDSQRKLQF-YEDRHQ- 236 (289)
T ss_dssp CCSCTTTSCH------HHHHHTTTTSCHHHHHCGGGCCHHHHHHHHHHHHHHHHTTTCCTTTTSCHHHHHHH-HHTTCC-
T ss_pred CcccccccCc------cccCCcCcccCHHHhCCCCCCCchhHHHHHHHHHHHHHcCCCCCccccchHHHHHH-hhccCC-
Confidence 9998765321 23457889999999877 67899999999999999999966554332211111111 110000
Q ss_pred ccchhhcccccCchhhhhHHHHHHHHHHHHHHHhccccCcCCCCCHHHHHHHHHHhHHh
Q 002021 905 STMEVVDANLLSQEDIHFVAKEQCVSFVFNLAMECTMEFPKQRINAKEIVTKLLKIRDS 963 (979)
Q Consensus 905 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~eil~~L~~~~~~ 963 (979)
.+..++.++.+++.+||+.||++|||+.|++++|+++...
T Consensus 237 -------------------~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~l~~l~~p 276 (289)
T 4fvq_A 237 -------------------LPAPKAAELANLINNCMDYEPDHRPSFRAIIRDLNSLFTP 276 (289)
T ss_dssp -------------------CCCCSSCTTHHHHHHHSCSSGGGSCCHHHHHHHHHTCC--
T ss_pred -------------------CCCCCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHhcCC
Confidence 0011234478999999999999999999999999998764
No 131
>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens}
Probab=100.00 E-value=3.2e-39 Score=386.72 Aligned_cols=264 Identities=23% Similarity=0.378 Sum_probs=213.3
Q ss_pred eeeeecceEEEEEEcC---CCcEEEEEEecccc-ccchhcHHHHHHHHHhcCCCCeeeEEEeeccCCeeEEEEEecCCCc
Q 002021 689 LIGRGGFGSVYKASLG---DGMEVAVKVFTSQC-GRAFKSFDVECEIMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGS 764 (979)
Q Consensus 689 ~lG~G~~g~Vy~~~~~---~~~~vAvK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~E~~~~g~ 764 (979)
.||+|+||.||+|.+. ++..||||+++... ....+.+.+|+++++.++|||||++++++.. +..++||||+++|+
T Consensus 343 ~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~E~~il~~l~hpniv~l~~~~~~-~~~~lv~E~~~~g~ 421 (613)
T 2ozo_A 343 ELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVCQA-EALMLVMEMAGGGP 421 (613)
T ss_dssp EEEECSSSEEEEEEEECSSCEEEEEEEECCCCCSSTTHHHHHHHHHHHTTCCCTTBCCEEEEEES-SSEEEEEECCTTCB
T ss_pred EEecCCCcEEEEEEEecCCCcEEEEEEEcCCCCChHHHHHHHHHHHHHHhCCCCCEeeEEEEecc-CCeEEEEEeCCCCc
Confidence 7999999999999652 56789999997653 2346789999999999999999999999976 56899999999999
Q ss_pred cceeeccCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCEEeCCCCcEEEEeeccccccCCCCCc-ceecc
Q 002021 765 LEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFSIAKMLTGEDQS-MIQTQ 843 (979)
Q Consensus 765 L~~~l~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~i~H~Dik~~NIll~~~~~~kl~Dfg~~~~~~~~~~~-~~~~~ 843 (979)
|.+++......+++.+++.++.||+.||+||| +++|+||||||+||+++.++.+||+|||+++........ .....
T Consensus 422 L~~~l~~~~~~l~~~~~~~i~~qi~~~L~~LH---~~~iiHrDlkp~NILl~~~~~vkL~DFGla~~~~~~~~~~~~~~~ 498 (613)
T 2ozo_A 422 LHKFLVGKREEIPVSNVAELLHQVSMGMKYLE---EKNFVHRNLAARNVLLVNRHYAKISDFGLSKALGADDSYYTARSA 498 (613)
T ss_dssp HHHHHTTCTTTSCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEEEETTEEEECCCSTTTTCC-----------
T ss_pred HHHHHhhccCCCCHHHHHHHHHHHHHHHHHHH---HCCEEcCcCCHHHEEEcCCCcEEEeeccCcccccCCCceeeeccC
Confidence 99999877777999999999999999999999 999999999999999999999999999999876433221 11223
Q ss_pred cccCCCCCCccccCCCCCCCchhHHHHHHHHHHHHc-CCCCCcccccCcchHhHhhhhhcCCccchhhcccccCchhhhh
Q 002021 844 TLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFT-GKKPTDEIFNGEMTLKHWVNDWLPISTMEVVDANLLSQEDIHF 922 (979)
Q Consensus 844 ~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~t-g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 922 (979)
..+|+.|+|||++.++.++.++|||||||++|||++ |+.||......+ ....+... .+.
T Consensus 499 ~~~~~~y~APE~~~~~~~~~~sDvwSlGv~l~ellt~G~~Pf~~~~~~~--~~~~i~~~------------------~~~ 558 (613)
T 2ozo_A 499 GKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGPE--VMAFIEQG------------------KRM 558 (613)
T ss_dssp ---CCTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCSHH--HHHHHHTT------------------CCC
T ss_pred CCCccceeCHhhhcCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCCHHH--HHHHHHcC------------------CCC
Confidence 346789999999988899999999999999999998 999997632221 11111100 011
Q ss_pred HHHHHHHHHHHHHHHhccccCcCCCCCHHHHHHHHHHhHHhhccCCCCcceecc
Q 002021 923 VAKEQCVSFVFNLAMECTMEFPKQRINAKEIVTKLLKIRDSLLRNVGGRCVRQS 976 (979)
Q Consensus 923 ~~~~~~~~~l~~l~~~cl~~dP~~Rps~~eil~~L~~~~~~~~~~~~~~~~~~~ 976 (979)
..+..+++++.++|.+||..||++||++.|+++.|+++..+.........+.++
T Consensus 559 ~~p~~~~~~l~~li~~cl~~dP~~RPs~~~l~~~L~~~~~~~~~~~~~~s~lev 612 (613)
T 2ozo_A 559 ECPPECPPELYALMSDCWIYKWEDRPDFLTVEQRMRACYYSLASKVEGGSALEV 612 (613)
T ss_dssp CCCTTCCHHHHHHHHHTTCSSTTTSCCHHHHHHHHHHHHHHHSCSCCCSSSCSC
T ss_pred CCCCcCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHHHhccccCCccceec
Confidence 122356778999999999999999999999999999999988888777766654
No 132
>1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ...
Probab=100.00 E-value=2.1e-39 Score=351.31 Aligned_cols=260 Identities=24% Similarity=0.413 Sum_probs=211.2
Q ss_pred hCCCCCCceeeeecceEEEEEEcCCCcEEEEEEeccccccchhcHHHHHHHHHhcCCCCeeeEEEeeccCCeeEEEEEec
Q 002021 681 TDGFSENNLIGRGGFGSVYKASLGDGMEVAVKVFTSQCGRAFKSFDVECEIMKSIRHRNLIKVISSCSNEEFKALVLEYM 760 (979)
Q Consensus 681 ~~~~~~~~~lG~G~~g~Vy~~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~E~~ 760 (979)
.++|+..+.||+|+||.||+|...+++.||||++.... ...+.+.+|+++++.++||||+++++++.+ +..++||||+
T Consensus 12 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~-~~~~~v~e~~ 89 (279)
T 1qpc_A 12 RETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGS-MSPDAFLAEANLMKQLQHQRLVRLYAVVTQ-EPIYIITEYM 89 (279)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECTTS-SCHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCEEEEECC
T ss_pred HHhhhheeeecCCCCeEEEEEEEcCCcEEEEEEecCCc-ccHHHHHHHHHHHHhCCCcCcceEEEEEcC-CCcEEEEecC
Confidence 46788899999999999999988788899999986543 345778999999999999999999999864 4588999999
Q ss_pred CCCccceeeccCC-CCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCEEeCCCCcEEEEeeccccccCCCCCcc
Q 002021 761 PHGSLEKYLYSSN-CILDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFSIAKMLTGEDQSM 839 (979)
Q Consensus 761 ~~g~L~~~l~~~~-~~l~~~~~~~i~~~ia~~L~~LH~~~~~~i~H~Dik~~NIll~~~~~~kl~Dfg~~~~~~~~~~~~ 839 (979)
++++|.+++.... ..+++.+++.++.|++.||+||| +++|+||||||+||++++++.+||+|||.+....... ..
T Consensus 90 ~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH---~~~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~-~~ 165 (279)
T 1qpc_A 90 ENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIE---ERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNE-YT 165 (279)
T ss_dssp TTCBHHHHTTSHHHHTCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECTTSCEEECCCTTCEECSSSC-EE
T ss_pred CCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHH---HCCeeccCCCHhhEEEcCCCCEEECCCcccccccCcc-cc
Confidence 9999999987642 36899999999999999999999 9999999999999999999999999999998764332 12
Q ss_pred eecccccCCCCCCccccCCCCCCCchhHHHHHHHHHHHHc-CCCCCcccccCcchHhHhhhhhcCCccchhhcccccCch
Q 002021 840 IQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFT-GKKPTDEIFNGEMTLKHWVNDWLPISTMEVVDANLLSQE 918 (979)
Q Consensus 840 ~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~t-g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 918 (979)
......++..|+|||.+.++.++.++||||+|+++|||++ |+.||......+ ....+....
T Consensus 166 ~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~--~~~~~~~~~---------------- 227 (279)
T 1qpc_A 166 AREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPE--VIQNLERGY---------------- 227 (279)
T ss_dssp CCTTCCCCTTTSCHHHHHHCEECHHHHHHHHHHHHHHHHTTTCCSSTTCCHHH--HHHHHHTTC----------------
T ss_pred cccCCCCccCccChhhhccCCCCchhhhHHHHHHHHHHHhCCCCCCcccCHHH--HHHHHhccc----------------
Confidence 2234456789999999988889999999999999999999 999986532211 111110000
Q ss_pred hhhhHHHHHHHHHHHHHHHhccccCcCCCCCHHHHHHHHHHhHHhhcc
Q 002021 919 DIHFVAKEQCVSFVFNLAMECTMEFPKQRINAKEIVTKLLKIRDSLLR 966 (979)
Q Consensus 919 ~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~eil~~L~~~~~~~~~ 966 (979)
....+..++.++.+++.+|+..||++|||+.|+++.|+++..+...
T Consensus 228 --~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~~~~~~ 273 (279)
T 1qpc_A 228 --RMVRPDNCPEELYQLMRLCWKERPEDRPTFDYLRSVLEDFFTATEG 273 (279)
T ss_dssp --CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHC--
T ss_pred --CCCCcccccHHHHHHHHHHhccChhhCCCHHHHHHHHHHHHHhccC
Confidence 0001123456799999999999999999999999999999876543
No 133
>3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B*
Probab=100.00 E-value=5.3e-39 Score=365.69 Aligned_cols=273 Identities=17% Similarity=0.229 Sum_probs=205.8
Q ss_pred hCCCCCCceeeee--cceEEEEEEc-CCCcEEEEEEecccc--ccchhcHHHHHHHHHhcCCCCeeeEEEeeccCCeeEE
Q 002021 681 TDGFSENNLIGRG--GFGSVYKASL-GDGMEVAVKVFTSQC--GRAFKSFDVECEIMKSIRHRNLIKVISSCSNEEFKAL 755 (979)
Q Consensus 681 ~~~~~~~~~lG~G--~~g~Vy~~~~-~~~~~vAvK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 755 (979)
.++|+..+.||+| +||.||+|.. .+|+.||||++.... ....+.+.+|+++++.++||||+++++++.+++..++
T Consensus 24 ~~~y~~~~~lG~G~~~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~l 103 (389)
T 3gni_B 24 GGCYELLTVIGKGFEDLMTVNLARYKPTGEYVTVRRINLEACSNEMVTFLQGELHVSKLFNHPNIVPYRATFIADNELWV 103 (389)
T ss_dssp GGGEEEEEEEEEETTTTEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEE
T ss_pred CCcEEEEecccCCcCCceEEEEEEEcCCCCEEEEEEecccccChHHHHHHHHHHHHHHhCCCCCCCcEeEEEEECCEEEE
Confidence 3678899999999 9999999954 579999999997543 2334677889999999999999999999999999999
Q ss_pred EEEecCCCccceeeccC-CCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCEEeCCCCcEEEEeeccccccCC
Q 002021 756 VLEYMPHGSLEKYLYSS-NCILDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFSIAKMLTG 834 (979)
Q Consensus 756 v~E~~~~g~L~~~l~~~-~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~i~H~Dik~~NIll~~~~~~kl~Dfg~~~~~~~ 834 (979)
||||+++|+|.+++... ...+++..+..++.||+.||+||| +++|+||||||+||+++.++.+||+|||.+.....
T Consensus 104 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH---~~~ivHrDlkp~NIll~~~~~~kl~dfg~~~~~~~ 180 (389)
T 3gni_B 104 VTSFMAYGSAKDLICTHFMDGMNELAIAYILQGVLKALDYIH---HMGYVHRSVKASHILISVDGKVYLSGLRSNLSMIS 180 (389)
T ss_dssp EEECCTTCBHHHHHHHTCTTCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECTTCCEEECCGGGCEECEE
T ss_pred EEEccCCCCHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCHHHEEEcCCCCEEEcccccceeecc
Confidence 99999999999998764 346899999999999999999999 99999999999999999999999999999865432
Q ss_pred CCC-----cceecccccCCCCCCccccCC--CCCCCchhHHHHHHHHHHHHcCCCCCcccccCcchHhHhhhhhcCCc--
Q 002021 835 EDQ-----SMIQTQTLATIGYMAPEYGRE--GRVSANGDVYSFGIMLMETFTGKKPTDEIFNGEMTLKHWVNDWLPIS-- 905 (979)
Q Consensus 835 ~~~-----~~~~~~~~gt~~y~aPE~~~~--~~~~~~~DvwslG~il~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~-- 905 (979)
... ........||+.|+|||++.+ ..++.++||||+||++|||++|+.||......+.....+........
T Consensus 181 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~ 260 (389)
T 3gni_B 181 HGQRQRVVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKDMPATQMLLEKLNGTVPCLLDT 260 (389)
T ss_dssp TTEECSCBCCCCTTCTTTGGGSCHHHHSTTSSCBCTHHHHHHHHHHHHHHHHSSCTTTTCCSTTHHHHC-----------
T ss_pred ccccccccccccccccccccccCHHHHhccCCCCCcHhHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHhcCCCCccccc
Confidence 211 111233478999999999887 57899999999999999999999999764333222111100000000
Q ss_pred --------------------cchhhc---ccccCchhhhhHHHHHHHHHHHHHHHhccccCcCCCCCHHHHHHH
Q 002021 906 --------------------TMEVVD---ANLLSQEDIHFVAKEQCVSFVFNLAMECTMEFPKQRINAKEIVTK 956 (979)
Q Consensus 906 --------------------~~~~~~---~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~eil~~ 956 (979)
..+... .............+..+++++.+++.+||+.||++|||+.|+++|
T Consensus 261 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rpta~ell~h 334 (389)
T 3gni_B 261 STIPAEELTMSPSRSVANSGLSDSLTTSTPRPSNGDSPSHPYHRTFSPHFHHFVEQCLQRNPDARPSASTLLNH 334 (389)
T ss_dssp ---------------------------------------------CCHHHHHHHHHHTCSCTTTSCCHHHHTTS
T ss_pred cccccccccccccccccccccccccccCccccccCCCCCCccccccCHHHHHHHHHHhhcCcccCCCHHHHhcC
Confidence 000000 000000001112334566789999999999999999999999987
No 134
>3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=1.3e-39 Score=366.81 Aligned_cols=262 Identities=25% Similarity=0.435 Sum_probs=200.8
Q ss_pred CCCCceeeeecceEEEEEEcC--CC--cEEEEEEecccc-ccchhcHHHHHHHHHhcCCCCeeeEEEeec-cCCeeEEEE
Q 002021 684 FSENNLIGRGGFGSVYKASLG--DG--MEVAVKVFTSQC-GRAFKSFDVECEIMKSIRHRNLIKVISSCS-NEEFKALVL 757 (979)
Q Consensus 684 ~~~~~~lG~G~~g~Vy~~~~~--~~--~~vAvK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~-~~~~~~lv~ 757 (979)
|+..+.||+|+||.||+|... ++ ..||||.+.... ....+.+.+|+.++++++||||+++++++. .++..++||
T Consensus 91 ~~~~~~LG~G~fg~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~~lv~ 170 (373)
T 3c1x_A 91 VHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVL 170 (373)
T ss_dssp EEEEEEEECCSSSEEEEEEEEETTTEEEEEEEEECCSCSCSHHHHHHHHHHTTSTTCCCTTBCCCCEEECCCSSCCEEEE
T ss_pred eecCcEeeeCCCeEEEEEEEECCCCcEEEEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEEcCCCCeEEEE
Confidence 556689999999999999652 22 468999986543 234577899999999999999999999865 456789999
Q ss_pred EecCCCccceeeccCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCEEeCCCCcEEEEeeccccccCCCCC
Q 002021 758 EYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFSIAKMLTGEDQ 837 (979)
Q Consensus 758 E~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~i~H~Dik~~NIll~~~~~~kl~Dfg~~~~~~~~~~ 837 (979)
||+++|+|.+++......+++.+++.++.|+++||+||| +++|+||||||+||++++++.+||+|||+++.......
T Consensus 171 e~~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH---~~~ivHrDlkp~NIll~~~~~~kL~DFG~a~~~~~~~~ 247 (373)
T 3c1x_A 171 PYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLA---SKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEF 247 (373)
T ss_dssp ECCTTCBHHHHHHCTTCCCBHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEECTTCCEEECCC-----------
T ss_pred ECCCCCCHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHH---HCCEecCccchheEEECCCCCEEEeecccccccccccc
Confidence 999999999999887777899999999999999999999 99999999999999999999999999999986643321
Q ss_pred c--ceecccccCCCCCCccccCCCCCCCchhHHHHHHHHHHHHc-CCCCCcccccCcchHhHhhhhhcCCccchhhcccc
Q 002021 838 S--MIQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFT-GKKPTDEIFNGEMTLKHWVNDWLPISTMEVVDANL 914 (979)
Q Consensus 838 ~--~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~t-g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 914 (979)
. .......+|+.|+|||.+.+..++.++|||||||++|||+| |..||......+ ....+....
T Consensus 248 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~il~ellt~~~~p~~~~~~~~--~~~~~~~~~------------ 313 (373)
T 3c1x_A 248 DSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFD--ITVYLLQGR------------ 313 (373)
T ss_dssp ----------CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSCSSC--HHHHHHTTC------------
T ss_pred ccccccCCCCCcccccChHHhcCCCCCcHHHHHHHHHHHHHHHhCcCCCCCCCCHHH--HHHHHHcCC------------
Confidence 1 12234457889999999998899999999999999999999 666775532221 111111000
Q ss_pred cCchhhhhHHHHHHHHHHHHHHHhccccCcCCCCCHHHHHHHHHHhHHhhccCC
Q 002021 915 LSQEDIHFVAKEQCVSFVFNLAMECTMEFPKQRINAKEIVTKLLKIRDSLLRNV 968 (979)
Q Consensus 915 ~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~eil~~L~~~~~~~~~~~ 968 (979)
+...+..++..+.+++.+||+.||++|||+.|++++|+++.+++..+.
T Consensus 314 ------~~~~p~~~~~~l~~li~~cl~~dp~~RPs~~ell~~L~~i~~~~~~~~ 361 (373)
T 3c1x_A 314 ------RLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAIFSTFIGEH 361 (373)
T ss_dssp ------CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHTCCSCC
T ss_pred ------CCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHhccccc
Confidence 001123456679999999999999999999999999999998776544
No 135
>1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A*
Probab=100.00 E-value=1e-39 Score=363.03 Aligned_cols=251 Identities=22% Similarity=0.297 Sum_probs=204.2
Q ss_pred HhhCCCCCCceeeeecceEEEEEEc-CCCcEEEEEEecccc---ccchhcHHHHHHHHHhc-CCCCeeeEEEeeccCCee
Q 002021 679 RATDGFSENNLIGRGGFGSVYKASL-GDGMEVAVKVFTSQC---GRAFKSFDVECEIMKSI-RHRNLIKVISSCSNEEFK 753 (979)
Q Consensus 679 ~~~~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vAvK~~~~~~---~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~ 753 (979)
...++|+..+.||+|+||.||+|+. .+|+.||||+++... ....+.+..|.++++.+ +||||+++++++.+++..
T Consensus 14 ~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~iv~l~~~~~~~~~~ 93 (345)
T 1xjd_A 14 LKIEDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHMFCTFQTKENL 93 (345)
T ss_dssp --CTTEEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHTTCTTBCCEEEEEECSSEE
T ss_pred CChHHeEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhHHhhhhhhHHHHHHHHHHHHhcCCCCCCCcEEEEEEeCCEE
Confidence 3457899999999999999999964 578999999997542 23456678899999887 899999999999999999
Q ss_pred EEEEEecCCCccceeeccCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCEEeCCCCcEEEEeeccccccC
Q 002021 754 ALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFSIAKMLT 833 (979)
Q Consensus 754 ~lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~i~H~Dik~~NIll~~~~~~kl~Dfg~~~~~~ 833 (979)
|+||||+++|+|.+++.... .+++.++..++.|++.||+||| +++|+||||||+||+++.++.+||+|||+++...
T Consensus 94 ~lv~E~~~gg~L~~~l~~~~-~~~~~~~~~~~~qi~~aL~~LH---~~~ivHrDlkp~NIll~~~g~vkL~DFG~a~~~~ 169 (345)
T 1xjd_A 94 FFVMEYLNGGDLMYHIQSCH-KFDLSRATFYAAEIILGLQFLH---SKGIVYRDLKLDNILLDKDGHIKIADFGMCKENM 169 (345)
T ss_dssp EEEEECCTTCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHH---HTTCBCCCCCGGGEEECTTSCEEECCCTTCBCCC
T ss_pred EEEEeCCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHH---HCCeEeCCCChhhEEECCCCCEEEeEChhhhhcc
Confidence 99999999999999987643 6899999999999999999999 9999999999999999999999999999998643
Q ss_pred CCCCcceecccccCCCCCCccccCCCCCCCchhHHHHHHHHHHHHcCCCCCcccccCcchHhHhhhhhcCCccchhhccc
Q 002021 834 GEDQSMIQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFTGKKPTDEIFNGEMTLKHWVNDWLPISTMEVVDAN 913 (979)
Q Consensus 834 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 913 (979)
.... .....+||+.|+|||++.+..++.++||||+||++|||++|+.||...... .....+....
T Consensus 170 ~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~--~~~~~i~~~~----------- 234 (345)
T 1xjd_A 170 LGDA--KTNTFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQDEE--ELFHSIRMDN----------- 234 (345)
T ss_dssp CTTC--CBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHH--HHHHHHHHCC-----------
T ss_pred cCCC--cccCCCCCcccCChhhhcCCCCCChhhhHHHHHHHHHHhcCCCCCCCCCHH--HHHHHHHhCC-----------
Confidence 2221 234567999999999999989999999999999999999999999753211 1111100000
Q ss_pred ccCchhhhhHHHHHHHHHHHHHHHhccccCcCCCCCHH-HHHHH
Q 002021 914 LLSQEDIHFVAKEQCVSFVFNLAMECTMEFPKQRINAK-EIVTK 956 (979)
Q Consensus 914 ~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~-eil~~ 956 (979)
...+..++.++.+++.+|++.||++||++. |+++|
T Consensus 235 --------~~~p~~~s~~~~~li~~lL~~dp~~R~~~~~~i~~h 270 (345)
T 1xjd_A 235 --------PFYPRWLEKEAKDLLVKLFVREPEKRLGVRGDIRQH 270 (345)
T ss_dssp --------CCCCTTSCHHHHHHHHHHSCSSGGGSBTTBSCGGGS
T ss_pred --------CCCCcccCHHHHHHHHHHhcCCHhHcCCChHHHHcC
Confidence 001123456789999999999999999997 66643
No 136
>2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ...
Probab=100.00 E-value=1.2e-38 Score=344.78 Aligned_cols=253 Identities=23% Similarity=0.318 Sum_probs=208.2
Q ss_pred CCCCCCceeeeecceEEEEEEc-CCCcEEEEEEecccc-ccchhcHHHHHHHHHhcCCCCeeeEEEeeccCCeeEEEEEe
Q 002021 682 DGFSENNLIGRGGFGSVYKASL-GDGMEVAVKVFTSQC-GRAFKSFDVECEIMKSIRHRNLIKVISSCSNEEFKALVLEY 759 (979)
Q Consensus 682 ~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vAvK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~E~ 759 (979)
++|+..+.||+|+||.||+|.. .+++.||||++.... ....+.+.+|+++++.++||||+++++++.+++..++||||
T Consensus 7 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 86 (276)
T 2yex_A 7 EDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEY 86 (276)
T ss_dssp HHEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGCTTHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEEC
T ss_pred cceEEEEEeecCCCcEEEEEEECCCCcEEEEEEeeeccchhhhHHHHHHHHHHHhcCCCCceeeeeEEEcCCEEEEEEEe
Confidence 5688899999999999999954 478999999986443 23456788999999999999999999999999999999999
Q ss_pred cCCCccceeeccCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCEEeCCCCcEEEEeeccccccCCCCCcc
Q 002021 760 MPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFSIAKMLTGEDQSM 839 (979)
Q Consensus 760 ~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~i~H~Dik~~NIll~~~~~~kl~Dfg~~~~~~~~~~~~ 839 (979)
+++++|.+++... ..+++.+++.++.|++.||+||| +++|+||||||+||+++.++.+||+|||.+..........
T Consensus 87 ~~~~~L~~~l~~~-~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~~ 162 (276)
T 2yex_A 87 CSGGELFDRIEPD-IGMPEPDAQRFFHQLMAGVVYLH---GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRER 162 (276)
T ss_dssp CTTEEGGGGSBTT-TBCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECTTCCEEECCCTTCEECEETTEEC
T ss_pred cCCCcHHHHHhhc-cCCCHHHHHHHHHHHHHHHHHHH---hCCeeccCCChHHEEEccCCCEEEeeCCCccccCCCcchh
Confidence 9999999998764 36899999999999999999999 9999999999999999999999999999998654332222
Q ss_pred eecccccCCCCCCccccCCCCC-CCchhHHHHHHHHHHHHcCCCCCcccccCcchHhHhhhhhcCCccchhhcccccCch
Q 002021 840 IQTQTLATIGYMAPEYGREGRV-SANGDVYSFGIMLMETFTGKKPTDEIFNGEMTLKHWVNDWLPISTMEVVDANLLSQE 918 (979)
Q Consensus 840 ~~~~~~gt~~y~aPE~~~~~~~-~~~~DvwslG~il~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 918 (979)
......||+.|+|||.+.+..+ +.++||||+|+++|||++|+.||............|......
T Consensus 163 ~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~--------------- 227 (276)
T 2yex_A 163 LLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTY--------------- 227 (276)
T ss_dssp CBCCCCSCGGGCCGGGGTCSSBCHHHHHHHHHHHHHHHHHHSSCCCSCSCTTSHHHHHHHTTCTT---------------
T ss_pred cccCCccccCccChHHHhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCCchHHHHHHHhhhcccc---------------
Confidence 2345678999999999987665 778999999999999999999997644333333333221100
Q ss_pred hhhhHHHHHHHHHHHHHHHhccccCcCCCCCHHHHHHH
Q 002021 919 DIHFVAKEQCVSFVFNLAMECTMEFPKQRINAKEIVTK 956 (979)
Q Consensus 919 ~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~eil~~ 956 (979)
......++..+.+++.+|++.||++|||+.|+++|
T Consensus 228 ---~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~ 262 (276)
T 2yex_A 228 ---LNPWKKIDSAPLALLHKILVENPSARITIPDIKKD 262 (276)
T ss_dssp ---STTGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTTC
T ss_pred ---cCchhhcCHHHHHHHHHHCCCCchhCCCHHHHhcC
Confidence 01112345678999999999999999999999875
No 137
>2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A*
Probab=100.00 E-value=7.9e-39 Score=353.38 Aligned_cols=269 Identities=23% Similarity=0.296 Sum_probs=192.0
Q ss_pred hCCCCCCceeeeecceEEEEEEc-CCCcEEEEEEecccc-ccchhcHHHHHHHHHhcCCCCeeeEEEeeccCCeeEEEEE
Q 002021 681 TDGFSENNLIGRGGFGSVYKASL-GDGMEVAVKVFTSQC-GRAFKSFDVECEIMKSIRHRNLIKVISSCSNEEFKALVLE 758 (979)
Q Consensus 681 ~~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vAvK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~E 758 (979)
.++|+..+.||+|+||.||+|.. .+|+.||||++.... ....+.+.+|++++++++||||+++++++.+++..++|||
T Consensus 4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e 83 (317)
T 2pmi_A 4 SSQFKQLEKLGNGTYATVYKGLNKTTGVYVALKEVKLDSEEGTPSTAIREISLMKELKHENIVRLYDVIHTENKLTLVFE 83 (317)
T ss_dssp ---------------CEEEEEECSSSCCEEEEEEEECCSTTCSCHHHHHHHHHHTTCCBTTBCCEEEEECCTTEEEEEEE
T ss_pred ccceeEeeEECCCCCEEEEEEEECCCCcEEEEEEeecccccccHHHHHHHHHHHHhcCCCCcceEEEEEEECCeEEEEEE
Confidence 46789999999999999999954 578999999987543 2344678899999999999999999999999999999999
Q ss_pred ecCCCccceeeccC-----CCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCEEeCCCCcEEEEeeccccccC
Q 002021 759 YMPHGSLEKYLYSS-----NCILDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFSIAKMLT 833 (979)
Q Consensus 759 ~~~~g~L~~~l~~~-----~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~i~H~Dik~~NIll~~~~~~kl~Dfg~~~~~~ 833 (979)
|++ |+|.+++... ...+++..+..++.|++.||+||| +++|+||||||+||+++.++.+||+|||++....
T Consensus 84 ~~~-~~L~~~l~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~lH---~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~ 159 (317)
T 2pmi_A 84 FMD-NDLKKYMDSRTVGNTPRGLELNLVKYFQWQLLQGLAFCH---ENKILHRDLKPQNLLINKRGQLKLGDFGLARAFG 159 (317)
T ss_dssp CCC-CBHHHHHHHHHSSSCCCCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEECTTCCEEECCCSSCEETT
T ss_pred ecC-CCHHHHHHhccccccccCCCHHHHHHHHHHHHHHHHHHH---HCCeeeCCCChHHeEEcCCCCEEECcCccceecC
Confidence 998 5998887643 245899999999999999999999 9999999999999999999999999999998764
Q ss_pred CCCCcceecccccCCCCCCccccCC-CCCCCchhHHHHHHHHHHHHcCCCCCcccccCcchHhHhhhhhc--CCc-cchh
Q 002021 834 GEDQSMIQTQTLATIGYMAPEYGRE-GRVSANGDVYSFGIMLMETFTGKKPTDEIFNGEMTLKHWVNDWL--PIS-TMEV 909 (979)
Q Consensus 834 ~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwslG~il~el~tg~~P~~~~~~~~~~~~~~~~~~~--~~~-~~~~ 909 (979)
.... ......+|+.|+|||++.+ ..++.++||||+||++|||++|+.||......+ .......... ... ...+
T Consensus 160 ~~~~--~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~-~~~~i~~~~~~~~~~~~~~~ 236 (317)
T 2pmi_A 160 IPVN--TFSSEVVTLWYRAPDVLMGSRTYSTSIDIWSCGCILAEMITGKPLFPGTNDEE-QLKLIFDIMGTPNESLWPSV 236 (317)
T ss_dssp SCCC--CCCCCCSCCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHH-HHHHHHHHHCSCCTTTCGGG
T ss_pred CCcc--cCCCCcccccccCchHhhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHH-HHHHHHHHhCCCChhHhhhh
Confidence 3222 2244578999999999876 468999999999999999999999997532211 1111111000 000 0000
Q ss_pred hc-----ccccCc--h----hhhhHHHHHHHHHHHHHHHhccccCcCCCCCHHHHHHH
Q 002021 910 VD-----ANLLSQ--E----DIHFVAKEQCVSFVFNLAMECTMEFPKQRINAKEIVTK 956 (979)
Q Consensus 910 ~~-----~~~~~~--~----~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~eil~~ 956 (979)
.+ ...... . .........++.++.+++.+|++.||++|||+.|+++|
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~e~l~h 294 (317)
T 2pmi_A 237 TKLPKYNPNIQQRPPRDLRQVLQPHTKEPLDGNLMDFLHGLLQLNPDMRLSAKQALHH 294 (317)
T ss_dssp GGCTTCCTTCCCCCCCCSHHHHGGGCSSCCCHHHHHHHHHHSCSSGGGSCCHHHHTTS
T ss_pred hhhhhcccccccccchhHHHhhcccccccCCHHHHHHHHHHCCCCcccCCCHHHHhCC
Confidence 00 000000 0 00011112355679999999999999999999999886
No 138
>3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens}
Probab=100.00 E-value=1.9e-39 Score=359.76 Aligned_cols=258 Identities=25% Similarity=0.398 Sum_probs=202.8
Q ss_pred CCCCCCceeeeecceEEEEEEc-CCCcE----EEEEEecccc-ccchhcHHHHHHHHHhcCCCCeeeEEEeeccCCeeEE
Q 002021 682 DGFSENNLIGRGGFGSVYKASL-GDGME----VAVKVFTSQC-GRAFKSFDVECEIMKSIRHRNLIKVISSCSNEEFKAL 755 (979)
Q Consensus 682 ~~~~~~~~lG~G~~g~Vy~~~~-~~~~~----vAvK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 755 (979)
++|+..+.||+|+||.||+|.. .+++. ||+|.+.... ....+.+.+|+++++.++||||+++++++..+. .++
T Consensus 15 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~iK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~-~~~ 93 (327)
T 3lzb_A 15 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTST-VQL 93 (327)
T ss_dssp TTEEEEEEEEECSSEEEEEEEECCTTCSCCEEEEEEEECCCSSCCCHHHHHHHHHHHTTCCBTTBCCCCEEEESSS-EEE
T ss_pred hHceEEEEeeeCCCeEEEEEEEcCCCceEEEEEEEEeeccccCHHHHHHHHHHHHHHHhCCCCCeeEEEEEEecCC-ceE
Confidence 6788999999999999999964 44544 5777765432 335577899999999999999999999998765 789
Q ss_pred EEEecCCCccceeeccCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCEEeCCCCcEEEEeeccccccCCC
Q 002021 756 VLEYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFSIAKMLTGE 835 (979)
Q Consensus 756 v~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~i~H~Dik~~NIll~~~~~~kl~Dfg~~~~~~~~ 835 (979)
|+||+++|+|.+++......+++..++.++.|++.||+||| +++|+||||||+||+++.++.+||+|||+++.....
T Consensus 94 v~~~~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH---~~~ivH~Dikp~NIl~~~~~~~kL~DfG~a~~~~~~ 170 (327)
T 3lzb_A 94 ITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAE 170 (327)
T ss_dssp EECCCSSCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEEEETTEEEECCTTC-------
T ss_pred EEEecCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHh---hCCCcCCCCCHHHEEEcCCCCEEEccCcceeEccCc
Confidence 99999999999999887778999999999999999999999 999999999999999999999999999999876544
Q ss_pred CCcceecccccCCCCCCccccCCCCCCCchhHHHHHHHHHHHHc-CCCCCcccccCcchHhHhhhhhcCCccchhhcccc
Q 002021 836 DQSMIQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFT-GKKPTDEIFNGEMTLKHWVNDWLPISTMEVVDANL 914 (979)
Q Consensus 836 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~t-g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 914 (979)
..........+|+.|+|||.+.+..+++++||||+||++|||++ |+.||......+ ....+....
T Consensus 171 ~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~~--~~~~~~~~~------------ 236 (327)
T 3lzb_A 171 EKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASE--ISSILEKGE------------ 236 (327)
T ss_dssp ---------CCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGGG--HHHHHHTTC------------
T ss_pred cccccccCCCccccccCHHHHcCCCCChHHHHHHHHHHHHHHHHCCCCCCCCCCHHH--HHHHHHcCC------------
Confidence 43333445567889999999999999999999999999999999 999997633221 111111100
Q ss_pred cCchhhhhHHHHHHHHHHHHHHHhccccCcCCCCCHHHHHHHHHHhHHh
Q 002021 915 LSQEDIHFVAKEQCVSFVFNLAMECTMEFPKQRINAKEIVTKLLKIRDS 963 (979)
Q Consensus 915 ~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~eil~~L~~~~~~ 963 (979)
....+..++.++.+++.+||..||++||++.|+++.|+++.+.
T Consensus 237 ------~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~~ 279 (327)
T 3lzb_A 237 ------RLPQPPICTIDVYMIMRKCWMIDADSRPKFRELIIEFSKMARD 279 (327)
T ss_dssp ------CCCCCTTBCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHTS
T ss_pred ------CCCCCccCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHhC
Confidence 0011223456789999999999999999999999999999853
No 139
>1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=5.2e-39 Score=349.79 Aligned_cols=263 Identities=23% Similarity=0.380 Sum_probs=212.6
Q ss_pred CCCCCCc-eeeeecceEEEEEEc---CCCcEEEEEEecccc-ccchhcHHHHHHHHHhcCCCCeeeEEEeeccCCeeEEE
Q 002021 682 DGFSENN-LIGRGGFGSVYKASL---GDGMEVAVKVFTSQC-GRAFKSFDVECEIMKSIRHRNLIKVISSCSNEEFKALV 756 (979)
Q Consensus 682 ~~~~~~~-~lG~G~~g~Vy~~~~---~~~~~vAvK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 756 (979)
++|...+ .||+|+||.||+|.. .++..||||++.... ....+.+.+|+++++.++||||+++++++ +.+..++|
T Consensus 9 ~~~~i~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~-~~~~~~lv 87 (287)
T 1u59_A 9 DNLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVC-QAEALMLV 87 (287)
T ss_dssp GGEEEEEEEEECCTTEEEEEEEEC---CCEEEEEEEECSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEE-ESSSEEEE
T ss_pred HHhhhhhccccccCceeEEEeEeccCCCcceEEEEecCCccchhHHHHHHHHHHHHHhCCCCCEeEEEEEe-cCCCcEEE
Confidence 3455555 899999999999964 367889999997643 23456788999999999999999999999 45668999
Q ss_pred EEecCCCccceeeccCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCEEeCCCCcEEEEeeccccccCCCC
Q 002021 757 LEYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFSIAKMLTGED 836 (979)
Q Consensus 757 ~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~i~H~Dik~~NIll~~~~~~kl~Dfg~~~~~~~~~ 836 (979)
|||+++++|.+++......+++.+++.++.|++.||+||| +++|+||||||+||+++.++.+||+|||++.......
T Consensus 88 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dlkp~Nili~~~~~~kl~Dfg~~~~~~~~~ 164 (287)
T 1u59_A 88 MEMAGGGPLHKFLVGKREEIPVSNVAELLHQVSMGMKYLE---EKNFVHRDLAARNVLLVNRHYAKISDFGLSKALGADD 164 (287)
T ss_dssp EECCTTEEHHHHHTTCTTTSCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEEEETTEEEECCCTTCEECTTCS
T ss_pred EEeCCCCCHHHHHHhCCccCCHHHHHHHHHHHHHHHHHHH---HCCEeeCCCchheEEEcCCCCEEECcccceeeeccCc
Confidence 9999999999999877677999999999999999999999 9999999999999999999999999999998764333
Q ss_pred Cc-ceecccccCCCCCCccccCCCCCCCchhHHHHHHHHHHHHc-CCCCCcccccCcchHhHhhhhhcCCccchhhcccc
Q 002021 837 QS-MIQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFT-GKKPTDEIFNGEMTLKHWVNDWLPISTMEVVDANL 914 (979)
Q Consensus 837 ~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~t-g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 914 (979)
.. .......+|+.|+|||.+.+..++.++||||+|+++|||++ |+.||...... .....+....
T Consensus 165 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~--~~~~~i~~~~------------ 230 (287)
T 1u59_A 165 SYYTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGP--EVMAFIEQGK------------ 230 (287)
T ss_dssp CEECCCCSSCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCTH--HHHHHHHTTC------------
T ss_pred ceeeccccccccccccCHHHhccCCCCchhhHHHHHHHHHHHHcCCCCCcccCCHH--HHHHHHhcCC------------
Confidence 22 11233456889999999988889999999999999999999 99999753221 1111111100
Q ss_pred cCchhhhhHHHHHHHHHHHHHHHhccccCcCCCCCHHHHHHHHHHhHHhhccCC
Q 002021 915 LSQEDIHFVAKEQCVSFVFNLAMECTMEFPKQRINAKEIVTKLLKIRDSLLRNV 968 (979)
Q Consensus 915 ~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~eil~~L~~~~~~~~~~~ 968 (979)
....+..+++.+.+++.+||+.||++||++.|++++|+++..+.....
T Consensus 231 ------~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~~~~~~~~ 278 (287)
T 1u59_A 231 ------RMECPPECPPELYALMSDCWIYKWEDRPDFLTVEQRMRACYYSLASKV 278 (287)
T ss_dssp ------CCCCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHHHHHTTC
T ss_pred ------cCCCCCCcCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHhcCCcc
Confidence 001122456779999999999999999999999999999998765443
No 140
>3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A*
Probab=100.00 E-value=9.1e-39 Score=345.98 Aligned_cols=251 Identities=25% Similarity=0.307 Sum_probs=206.3
Q ss_pred hCCCCCCceeeeecceEEEEEE-cCCCcEEEEEEeccccccchhcHHHHHHHHHhcCCCCeeeEEEeeccCCeeEEEEEe
Q 002021 681 TDGFSENNLIGRGGFGSVYKAS-LGDGMEVAVKVFTSQCGRAFKSFDVECEIMKSIRHRNLIKVISSCSNEEFKALVLEY 759 (979)
Q Consensus 681 ~~~~~~~~~lG~G~~g~Vy~~~-~~~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~E~ 759 (979)
.+.|+..+.||+|+||.||+|. ..++..||+|++........+.+.+|+++++.++||||+++++++.+.+..++||||
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 87 (277)
T 3f3z_A 8 NQYYTLENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFVEDVDRFKQEIEIMKSLDHPNIIRLYETFEDNTDIYLVMEL 87 (277)
T ss_dssp HHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEEEC
T ss_pred hhhEEeeeEEeecCCEEEEEEEeCCCCcEEEEEeehhhccchHHHHHHHHHHHHhCCCCCEeeEEEEEecCCeEEEEEec
Confidence 4568889999999999999995 456789999999776556677899999999999999999999999999999999999
Q ss_pred cCCCccceeeccCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCEEe---CCCCcEEEEeeccccccCCCC
Q 002021 760 MPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLL---DDNMVAHLSDFSIAKMLTGED 836 (979)
Q Consensus 760 ~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~i~H~Dik~~NIll---~~~~~~kl~Dfg~~~~~~~~~ 836 (979)
+++++|.+++.... .+++.+++.++.|++.|++||| +++|+||||||+||++ +.++.+||+|||.+.......
T Consensus 88 ~~~~~L~~~~~~~~-~~~~~~~~~i~~~i~~~l~~lH---~~~i~H~dlkp~Nil~~~~~~~~~~~l~Dfg~~~~~~~~~ 163 (277)
T 3f3z_A 88 CTGGELFERVVHKR-VFRESDAARIMKDVLSAVAYCH---KLNVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPGK 163 (277)
T ss_dssp CCSCBHHHHHHHHC-SCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEESSSSTTCCEEECCCTTCEECCTTS
T ss_pred cCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHH---HCCccCCCCCHHHEEEecCCCCCcEEEEecccceeccCcc
Confidence 99999999887643 5899999999999999999999 9999999999999999 788999999999998764332
Q ss_pred CcceecccccCCCCCCccccCCCCCCCchhHHHHHHHHHHHHcCCCCCcccccCcchHhHhhhhhcCCccchhhcccccC
Q 002021 837 QSMIQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFTGKKPTDEIFNGEMTLKHWVNDWLPISTMEVVDANLLS 916 (979)
Q Consensus 837 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 916 (979)
......+|+.|+|||.+.+ .+++++||||+|+++|||++|+.||......+. .........
T Consensus 164 ---~~~~~~~t~~y~aPE~~~~-~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~-~~~~~~~~~-------------- 224 (277)
T 3f3z_A 164 ---MMRTKVGTPYYVSPQVLEG-LYGPECDEWSAGVMMYVLLCGYPPFSAPTDSEV-MLKIREGTF-------------- 224 (277)
T ss_dssp ---CBCCCCSCTTTCCHHHHTT-CBCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHH-HHHHHHCCC--------------
T ss_pred ---chhccCCCCCccChHHhcc-cCCchhhehhHHHHHHHHHHCCCCCCCCCHHHH-HHHHHhCCC--------------
Confidence 2244578999999998865 489999999999999999999999975322111 111100000
Q ss_pred chhhhhHHHHHHHHHHHHHHHhccccCcCCCCCHHHHHHH
Q 002021 917 QEDIHFVAKEQCVSFVFNLAMECTMEFPKQRINAKEIVTK 956 (979)
Q Consensus 917 ~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~eil~~ 956 (979)
.........+++.+.+++.+|++.||++|||+.|+++|
T Consensus 225 --~~~~~~~~~~~~~~~~li~~~l~~dp~~R~s~~~~l~h 262 (277)
T 3f3z_A 225 --TFPEKDWLNVSPQAESLIRRLLTKSPKQRITSLQALEH 262 (277)
T ss_dssp --CCCHHHHTTSCHHHHHHHHHHTCSSTTTSCCHHHHTTS
T ss_pred --CCCchhhhcCCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 00111122456779999999999999999999999875
No 141
>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} SCOP: d.144.1.0 PDB: 3kmw_A* 3rep_A*
Probab=100.00 E-value=5.6e-39 Score=346.34 Aligned_cols=251 Identities=23% Similarity=0.373 Sum_probs=205.2
Q ss_pred CCCCCCceeeeecceEEEEEEcCCCcEEEEEEecccc--ccchhcHHHHHHHHHhcCCCCeeeEEEeeccC--CeeEEEE
Q 002021 682 DGFSENNLIGRGGFGSVYKASLGDGMEVAVKVFTSQC--GRAFKSFDVECEIMKSIRHRNLIKVISSCSNE--EFKALVL 757 (979)
Q Consensus 682 ~~~~~~~~lG~G~~g~Vy~~~~~~~~~vAvK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~--~~~~lv~ 757 (979)
++|+..+.||+|+||.||+|.. +++.||||++.... ....+.+.+|++++++++||||+++++++.+. +..++||
T Consensus 10 ~~y~~~~~lg~G~~g~V~~~~~-~~~~~avK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~ 88 (271)
T 3kmu_A 10 KQLNFLTKLNENHSGELWKGRW-QGNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPNVLPVLGACQSPPAPHPTLIT 88 (271)
T ss_dssp GGCEEEEEEEEETTEEEEEEEE-TTEEEEEEEECCTTCCHHHHHHHHHHGGGGCCCSCTTEECEEEEECTTTSSSCEEEE
T ss_pred HHhHHHHHhcCCCcceEEEEEE-CCeeEEEEEecccccCHHHHHHHHHHHHHHHhcCCCchhheEEEEccCCCCCeEeee
Confidence 5688899999999999999987 48899999987543 23346788999999999999999999999876 7889999
Q ss_pred EecCCCccceeeccCCC-CCCHHHHHHHHHHHHHHHHHHhcCCCCC--eEecCCCCCCEEeCCCCcEEEEeeccccccCC
Q 002021 758 EYMPHGSLEKYLYSSNC-ILDIFQRLNIMIDVASALEYLHFGYSAP--VIHCDLKPSNVLLDDNMVAHLSDFSIAKMLTG 834 (979)
Q Consensus 758 E~~~~g~L~~~l~~~~~-~l~~~~~~~i~~~ia~~L~~LH~~~~~~--i~H~Dik~~NIll~~~~~~kl~Dfg~~~~~~~ 834 (979)
||+++|+|.+++..... .+++.+++.++.|++.||+||| +++ |+||||||+||+++.++.++++|||++.....
T Consensus 89 e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH---~~~~~i~H~dikp~Nil~~~~~~~~l~~~~~~~~~~~ 165 (271)
T 3kmu_A 89 HWMPYGSLYNVLHEGTNFVVDQSQAVKFALDMARGMAFLH---TLEPLIPRHALNSRSVMIDEDMTARISMADVKFSFQS 165 (271)
T ss_dssp ECCTTCBHHHHHHSCSSCCCCHHHHHHHHHHHHHHHHHHT---TSSSCCTTCCCSGGGEEECTTSCEEEEGGGSCCTTSC
T ss_pred cccCCCcHHHHHhhcccCCCCHHHHHHHHHHHHHHHHHHh---cCCCceecCCCccceEEEcCCcceeEEeccceeeecc
Confidence 99999999999987643 5899999999999999999999 888 99999999999999999999999998765321
Q ss_pred CCCcceecccccCCCCCCccccCCCCCCC---chhHHHHHHHHHHHHcCCCCCcccccCcchHhHhhhhhcCCccchhhc
Q 002021 835 EDQSMIQTQTLATIGYMAPEYGREGRVSA---NGDVYSFGIMLMETFTGKKPTDEIFNGEMTLKHWVNDWLPISTMEVVD 911 (979)
Q Consensus 835 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~---~~DvwslG~il~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 911 (979)
....+|+.|+|||.+.+..++. ++||||+|+++|||++|+.||......+..... .....
T Consensus 166 -------~~~~~t~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~-~~~~~--------- 228 (271)
T 3kmu_A 166 -------PGRMYAPAWVAPEALQKKPEDTNRRSADMWSFAVLLWELVTREVPFADLSNMEIGMKV-ALEGL--------- 228 (271)
T ss_dssp -------TTCBSCGGGSCHHHHHSCGGGSCHHHHHHHHHHHHHHHHHHCSCTTTTSCHHHHHHHH-HHSCC---------
T ss_pred -------cCccCCccccChhhhccCCCCCCCchhhHHHHHHHHHHHHhCCCCccccChHHHHHHH-HhcCC---------
Confidence 2346889999999987765544 799999999999999999999753222111110 00000
Q ss_pred ccccCchhhhhHHHHHHHHHHHHHHHhccccCcCCCCCHHHHHHHHHHhHH
Q 002021 912 ANLLSQEDIHFVAKEQCVSFVFNLAMECTMEFPKQRINAKEIVTKLLKIRD 962 (979)
Q Consensus 912 ~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~eil~~L~~~~~ 962 (979)
....+..+++.+.+++.+||+.||++|||+.|+++.|+++.+
T Consensus 229 ---------~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~L~~l~~ 270 (271)
T 3kmu_A 229 ---------RPTIPPGISPHVSKLMKICMNEDPAKRPKFDMIVPILEKMQD 270 (271)
T ss_dssp ---------CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHCC
T ss_pred ---------CCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHhhc
Confidence 001112355679999999999999999999999999998864
No 142
>3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 4deg_A* 4deh_A* 4dei_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 4aoi_A* 4ap7_A* 3q6w_A* ...
Probab=100.00 E-value=1.2e-38 Score=348.92 Aligned_cols=263 Identities=24% Similarity=0.408 Sum_probs=207.5
Q ss_pred CCCCCCceeeeecceEEEEEEcCC----CcEEEEEEeccccc-cchhcHHHHHHHHHhcCCCCeeeEEEee-ccCCeeEE
Q 002021 682 DGFSENNLIGRGGFGSVYKASLGD----GMEVAVKVFTSQCG-RAFKSFDVECEIMKSIRHRNLIKVISSC-SNEEFKAL 755 (979)
Q Consensus 682 ~~~~~~~~lG~G~~g~Vy~~~~~~----~~~vAvK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~~-~~~~~~~l 755 (979)
..|+..+.||+|+||.||+|...+ ...||||++..... ...+.+.+|++++++++||||+++++++ ..++..++
T Consensus 25 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 104 (298)
T 3f66_A 25 LIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLV 104 (298)
T ss_dssp EEEEEEEEEEEETTEEEEEEEEC-----CEEEEEEEETTCCSHHHHHHHHHHHHHHHTCCCTTBCCCCEEECCSSSCCEE
T ss_pred eehhhcceeeecCCceEEEEEEecCCCceeEEEEEecccCCCHHHHHHHHHHHHHHHhCCCCCEeeeeeEEEcCCCceEE
Confidence 457788999999999999996532 23689999875432 3456788999999999999999999985 55678899
Q ss_pred EEEecCCCccceeeccCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCEEeCCCCcEEEEeeccccccCCC
Q 002021 756 VLEYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFSIAKMLTGE 835 (979)
Q Consensus 756 v~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~i~H~Dik~~NIll~~~~~~kl~Dfg~~~~~~~~ 835 (979)
||||+++|+|.+++......+++.+++.++.|++.|++||| +++|+||||||+||+++.++.+||+|||.+......
T Consensus 105 v~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~ql~~~l~~lH---~~~i~H~dikp~Nil~~~~~~~kl~Dfg~a~~~~~~ 181 (298)
T 3f66_A 105 VLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLA---SKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDK 181 (298)
T ss_dssp EEECCTTCBHHHHHHCTTCCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEECTTCCEEECSCGGGCCCSCG
T ss_pred EEeCCCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHH---hCCccCCCCchheEEECCCCCEEECccccccccccc
Confidence 99999999999999887777999999999999999999999 999999999999999999999999999999876433
Q ss_pred CC--cceecccccCCCCCCccccCCCCCCCchhHHHHHHHHHHHHcCC-CCCcccccCcchHhHhhhhhcCCccchhhcc
Q 002021 836 DQ--SMIQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFTGK-KPTDEIFNGEMTLKHWVNDWLPISTMEVVDA 912 (979)
Q Consensus 836 ~~--~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~tg~-~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 912 (979)
.. ........+|+.|+|||.+.+..+++++||||+|+++|||++|. .||......+ ..........
T Consensus 182 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~~~~~~-~~~~~~~~~~---------- 250 (298)
T 3f66_A 182 EYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFD-ITVYLLQGRR---------- 250 (298)
T ss_dssp GGCBC-----CCBCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTSCTTT-HHHHHHTTCC----------
T ss_pred chhccccccCCCCCccccChHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCCccCCHHH-HHHHHhcCCC----------
Confidence 21 12233456788999999998889999999999999999999954 4554322111 1111111000
Q ss_pred cccCchhhhhHHHHHHHHHHHHHHHhccccCcCCCCCHHHHHHHHHHhHHhhccC
Q 002021 913 NLLSQEDIHFVAKEQCVSFVFNLAMECTMEFPKQRINAKEIVTKLLKIRDSLLRN 967 (979)
Q Consensus 913 ~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~eil~~L~~~~~~~~~~ 967 (979)
...+..++..+.+++.+||+.||++|||+.|+++.|+++.+++..+
T Consensus 251 ---------~~~~~~~~~~l~~li~~~l~~~p~~Rps~~ell~~L~~~~~~~~~~ 296 (298)
T 3f66_A 251 ---------LLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAIFSTFIGE 296 (298)
T ss_dssp ---------CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHTSCCS
T ss_pred ---------CCCCccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHhhccC
Confidence 0011234566899999999999999999999999999999876543
No 143
>3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens}
Probab=100.00 E-value=4.1e-39 Score=359.16 Aligned_cols=280 Identities=27% Similarity=0.335 Sum_probs=202.9
Q ss_pred hCCCCCCceeeeecceEEEEEEcCCCcEEEEEEeccccccchhcHHHHHHH--HHhcCCCCeeeEEEee-----ccCCee
Q 002021 681 TDGFSENNLIGRGGFGSVYKASLGDGMEVAVKVFTSQCGRAFKSFDVECEI--MKSIRHRNLIKVISSC-----SNEEFK 753 (979)
Q Consensus 681 ~~~~~~~~~lG~G~~g~Vy~~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~~--l~~l~h~niv~l~~~~-----~~~~~~ 753 (979)
.++|+..+.||+|+||.||+|+. +++.||||++.... ...+..|.++ +..++||||+++++++ ......
T Consensus 12 ~~~y~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~~---~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~ 87 (336)
T 3g2f_A 12 LDNLKLLELIGRGRYGAVYKGSL-DERPVAVKVFSFAN---RQNFINEKNIYRVPLMEHDNIARFIVGDERVTADGRMEY 87 (336)
T ss_dssp TTSEEEEEEEEECSSEEEEEEEE-TTEEEEEEEEEGGG---HHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECTTSCEEE
T ss_pred hHHhheeeecccCCCeEEEEEEE-CCeEEEEEEeeccc---hhhHHHHHHHHHHHhccCcchhhheecccccccCCCceE
Confidence 46788999999999999999977 68999999986432 2344445555 4458999999999744 234467
Q ss_pred EEEEEecCCCccceeeccCCCCCCHHHHHHHHHHHHHHHHHHhcCCCC---------CeEecCCCCCCEEeCCCCcEEEE
Q 002021 754 ALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGYSA---------PVIHCDLKPSNVLLDDNMVAHLS 824 (979)
Q Consensus 754 ~lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~---------~i~H~Dik~~NIll~~~~~~kl~ 824 (979)
++||||+++|+|.+++.... .++..++.++.|+++||+||| +. +|+||||||+||+++.++.+||+
T Consensus 88 ~lv~e~~~~g~L~~~l~~~~--~~~~~~~~i~~qi~~~L~~LH---~~~~~~~~~~~~ivH~Dikp~Nill~~~~~~kL~ 162 (336)
T 3g2f_A 88 LLVMEYYPNGSLXKYLSLHT--SDWVSSCRLAHSVTRGLAYLH---TELPRGDHYKPAISHRDLNSRNVLVKNDGTCVIS 162 (336)
T ss_dssp EEEECCCTTCBHHHHHHHCC--BCHHHHHHHHHHHHHHHHHHH---CCBCCGGGCBCCEECSSCSGGGEEECTTSCEEEC
T ss_pred EEEEecCCCCcHHHHHhhcc--cchhHHHHHHHHHHHHHHHHH---hhhccccccccceeecccccceEEEcCCCcEEEe
Confidence 89999999999999997654 588999999999999999999 77 99999999999999999999999
Q ss_pred eeccccccCCCCC------cceecccccCCCCCCccccCC-------CCCCCchhHHHHHHHHHHHHcCCCCCcccccCc
Q 002021 825 DFSIAKMLTGEDQ------SMIQTQTLATIGYMAPEYGRE-------GRVSANGDVYSFGIMLMETFTGKKPTDEIFNGE 891 (979)
Q Consensus 825 Dfg~~~~~~~~~~------~~~~~~~~gt~~y~aPE~~~~-------~~~~~~~DvwslG~il~el~tg~~P~~~~~~~~ 891 (979)
|||+++.+..... ........||+.|+|||++.+ ..+++++|||||||++|||++|+.||.......
T Consensus 163 DFG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~il~ell~g~~p~~~~~~~~ 242 (336)
T 3g2f_A 163 DFGLSMRLTGNRLVRPGEEDNAAISEVGTIRYMAPEVLEGAVNLRDXESALKQVDMYALGLIYWEIFMRCTDLFPGESVP 242 (336)
T ss_dssp CCTTCEECSSSSCC---------CCTTSCGGGCCHHHHTTCCCGGGHHHHHHHHHHHHHHHHHHHHHTTBGGGSTTSCCC
T ss_pred eccceeecccccccCccccccccccCCCccceeCchhhcCCcccccccccccccchHHHHHHHHHHHhcCCcCCCccchh
Confidence 9999987643221 112234569999999999876 456778999999999999999988765432211
Q ss_pred chHhHhhhhhcCCccch----hhc-ccccCchhhhhHHHHHHHHHHHHHHHhccccCcCCCCCHHHHHHHHHHhHHhhcc
Q 002021 892 MTLKHWVNDWLPISTME----VVD-ANLLSQEDIHFVAKEQCVSFVFNLAMECTMEFPKQRINAKEIVTKLLKIRDSLLR 966 (979)
Q Consensus 892 ~~~~~~~~~~~~~~~~~----~~~-~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~eil~~L~~~~~~~~~ 966 (979)
.....+..........+ ... ................++..+.+++.+||+.||++|||++|+++.|+++.+.+.+
T Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~e~l~~L~~ll~~~~~ 322 (336)
T 3g2f_A 243 EYQMAFQTEVGNHPTFEDMQVLVSREKQRPKFPEAWKENSLAVRSLKETIEDCWDQDAEARLTAQXAEERMAELMMIWER 322 (336)
T ss_dssp CCCCTTHHHHCSSCCHHHHHHHHTTSCCCCCCCTTCCCCSHHHHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHHHCCCC
T ss_pred HHHHhhhcccCCCchHHHHHhhhcccccCCCCCcccccccchHHHHHHHHHHHhcCChhhCcchHHHHHHHHHHHHHHHh
Confidence 11111100000000000 000 0000000001111234667899999999999999999999999999999988776
Q ss_pred CCC
Q 002021 967 NVG 969 (979)
Q Consensus 967 ~~~ 969 (979)
+-+
T Consensus 323 ~~~ 325 (336)
T 3g2f_A 323 NKS 325 (336)
T ss_dssp ---
T ss_pred ccc
Confidence 544
No 144
>2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens}
Probab=100.00 E-value=4.1e-39 Score=357.34 Aligned_cols=275 Identities=25% Similarity=0.410 Sum_probs=215.2
Q ss_pred CCCCCCceeeeecceEEEEEE-----cCCCcEEEEEEeccccccchhcHHHHHHHHHhcCCCCeeeEEEeeccCC--eeE
Q 002021 682 DGFSENNLIGRGGFGSVYKAS-----LGDGMEVAVKVFTSQCGRAFKSFDVECEIMKSIRHRNLIKVISSCSNEE--FKA 754 (979)
Q Consensus 682 ~~~~~~~~lG~G~~g~Vy~~~-----~~~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~--~~~ 754 (979)
+.|+..+.||+|+||.||+|. ..+++.||||++........+.+.+|++++++++||||+++++++...+ ..+
T Consensus 41 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 120 (326)
T 2w1i_A 41 RHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLK 120 (326)
T ss_dssp GGEEEEEEEECCSSEEEEEEEECTTSSSCCEEEEEEEESSCCSHHHHHHHHHHHHHHTCCCTTBCCEEEEECC----CCE
T ss_pred HHceeeeeeccCCCeEEEEEEeccccCCCceEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEEecCCCceE
Confidence 557888999999999999997 3468999999997765556678999999999999999999999886644 789
Q ss_pred EEEEecCCCccceeeccCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCEEeCCCCcEEEEeeccccccCC
Q 002021 755 LVLEYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFSIAKMLTG 834 (979)
Q Consensus 755 lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~i~H~Dik~~NIll~~~~~~kl~Dfg~~~~~~~ 834 (979)
+||||+++++|.+++......+++.+++.++.|+++||+||| +++|+||||||+||+++.++.+||+|||++.....
T Consensus 121 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH---~~~ivH~dikp~NIli~~~~~~kL~Dfg~~~~~~~ 197 (326)
T 2w1i_A 121 LIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLG---TKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQ 197 (326)
T ss_dssp EEECCCTTCBHHHHHHHSTTSSCHHHHHHHHHHHHHHHHHHH---HTTEECSCCCGGGEEEEETTEEEECCCTTCEECCS
T ss_pred EEEECCCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHH---hCCEeccCCCcceEEEcCCCcEEEecCcchhhccc
Confidence 999999999999999887667999999999999999999999 99999999999999999999999999999987654
Q ss_pred CCCcc-eecccccCCCCCCccccCCCCCCCchhHHHHHHHHHHHHcCCCCCcccccCcchHhHhhhhhcCCccc--hhhc
Q 002021 835 EDQSM-IQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFTGKKPTDEIFNGEMTLKHWVNDWLPISTM--EVVD 911 (979)
Q Consensus 835 ~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~--~~~~ 911 (979)
..... ......++..|+|||.+.+..++.++||||+|+++|||+||..||...... +............. .+..
T Consensus 198 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~tg~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~ 274 (326)
T 2w1i_A 198 DKEYYKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAE---FMRMIGNDKQGQMIVFHLIE 274 (326)
T ss_dssp SCSEEECSSCCSCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHHTTCGGGSHHHH---HHHHHCTTCCTHHHHHHHHH
T ss_pred cccccccccCCCCceeEECchhhcCCCCCchhhHHHHHHHHHHHHhcCCCCCCCHHH---HHHhhccccchhhhHHHHHH
Confidence 33221 122345677899999998888999999999999999999999997642110 00000000000000 0000
Q ss_pred ccccCchhhhhHHHHHHHHHHHHHHHhccccCcCCCCCHHHHHHHHHHhHHhhc
Q 002021 912 ANLLSQEDIHFVAKEQCVSFVFNLAMECTMEFPKQRINAKEIVTKLLKIRDSLL 965 (979)
Q Consensus 912 ~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~eil~~L~~~~~~~~ 965 (979)
... ...+.+.+..++.++.+++.+||+.||++|||+.|+++.|+++++++.
T Consensus 275 -~~~--~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~el~~~L~~l~~~l~ 325 (326)
T 2w1i_A 275 -LLK--NNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRDQMA 325 (326)
T ss_dssp -HHH--TTCCCCCCTTCCHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHHHHHH
T ss_pred -Hhh--cCCCCCCCCcccHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHHhc
Confidence 000 000111223566789999999999999999999999999999998763
No 145
>1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ...
Probab=100.00 E-value=4.4e-40 Score=364.67 Aligned_cols=272 Identities=23% Similarity=0.399 Sum_probs=217.5
Q ss_pred HHHHHhhCCCCCCceeeeecceEEEEEEcC------CCcEEEEEEeccccc-cchhcHHHHHHHHHhcCCCCeeeEEEee
Q 002021 675 LELCRATDGFSENNLIGRGGFGSVYKASLG------DGMEVAVKVFTSQCG-RAFKSFDVECEIMKSIRHRNLIKVISSC 747 (979)
Q Consensus 675 ~~~~~~~~~~~~~~~lG~G~~g~Vy~~~~~------~~~~vAvK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~~ 747 (979)
.++....++|+..+.||+|+||.||+|... +++.||||++..... .....+.+|+++++.++||||+++++++
T Consensus 18 ~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~ 97 (322)
T 1p4o_A 18 DEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVV 97 (322)
T ss_dssp CTTBCCGGGEEEEEEEEECSSSEEEEEEEEEEETTEEEEEEEEEECCTTSCHHHHHHHHHHHHHGGGCCCTTBCCEEEEE
T ss_pred hhhcchhhheeeeeEeccCCceEEEeeeecCccCCCCceEEEEEecccccCHHHHHHHHHHHHHHHhcCCCCEeeeEEEE
Confidence 334445678999999999999999999643 467899999875432 2345688999999999999999999999
Q ss_pred ccCCeeEEEEEecCCCccceeeccCC---------CCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCEEeCCC
Q 002021 748 SNEEFKALVLEYMPHGSLEKYLYSSN---------CILDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDN 818 (979)
Q Consensus 748 ~~~~~~~lv~E~~~~g~L~~~l~~~~---------~~l~~~~~~~i~~~ia~~L~~LH~~~~~~i~H~Dik~~NIll~~~ 818 (979)
.+.+..++||||+++|+|.+++...+ ..+++..++.++.|++.||+||| +++|+||||||+||+++.+
T Consensus 98 ~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH---~~~i~H~dikp~NIli~~~ 174 (322)
T 1p4o_A 98 SQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLN---ANKFVHRDLAARNCMVAED 174 (322)
T ss_dssp CSSSSCEEEEECCTTCBHHHHHHHHHHHHHHCTTCCCCCHHHHHHHHHHHHHHHHHHH---HTTCBCSCCSGGGEEECTT
T ss_pred ccCCccEEEEEeCCCCcHHHHHHHhchhhccCCCCCCcCHHHHHHHHHHHHHHHHHHH---HCCCccCCCccceEEEcCC
Confidence 99999999999999999999987532 35689999999999999999999 8999999999999999999
Q ss_pred CcEEEEeeccccccCCCCCcceecccccCCCCCCccccCCCCCCCchhHHHHHHHHHHHHc-CCCCCcccccCcchHhHh
Q 002021 819 MVAHLSDFSIAKMLTGEDQSMIQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFT-GKKPTDEIFNGEMTLKHW 897 (979)
Q Consensus 819 ~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~t-g~~P~~~~~~~~~~~~~~ 897 (979)
+.+||+|||++................+|+.|+|||.+.+..++.++||||+|+++|||++ |+.||...... .....
T Consensus 175 ~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~--~~~~~ 252 (322)
T 1p4o_A 175 FTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNE--QVLRF 252 (322)
T ss_dssp CCEEECCTTCCCGGGGGGCEEGGGSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTSCCTTTTSCHH--HHHHH
T ss_pred CeEEECcCccccccccccccccccCCCCCCCccChhhhccCCCCchhhHHHHHHHHHHHHhcCCCccccCCHH--HHHHH
Confidence 9999999999987643333223344567889999999988889999999999999999999 88998653211 11111
Q ss_pred hhhhcCCccchhhcccccCchhhhhHHHHHHHHHHHHHHHhccccCcCCCCCHHHHHHHHHHhHHhhccCCC
Q 002021 898 VNDWLPISTMEVVDANLLSQEDIHFVAKEQCVSFVFNLAMECTMEFPKQRINAKEIVTKLLKIRDSLLRNVG 969 (979)
Q Consensus 898 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~eil~~L~~~~~~~~~~~~ 969 (979)
+.. .. .. ..+..++..+.+++.+||+.||++|||+.|++++|+++.+....++.
T Consensus 253 ~~~---~~--------~~-------~~~~~~~~~l~~li~~~l~~dp~~Rps~~e~l~~L~~~~~~~~~~~~ 306 (322)
T 1p4o_A 253 VME---GG--------LL-------DKPDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIKEEMEPGFREVS 306 (322)
T ss_dssp HHT---TC--------CC-------CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHGGGSCTTHHHHC
T ss_pred HHc---CC--------cC-------CCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHHhhccCCcccc
Confidence 100 00 00 01124556789999999999999999999999999988765554443
No 146
>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A
Probab=100.00 E-value=2e-39 Score=379.53 Aligned_cols=256 Identities=25% Similarity=0.415 Sum_probs=212.3
Q ss_pred hCCCCCCceeeeecceEEEEEEcC-CCcEEEEEEeccccccchhcHHHHHHHHHhcCCCCeeeEEEeeccCCeeEEEEEe
Q 002021 681 TDGFSENNLIGRGGFGSVYKASLG-DGMEVAVKVFTSQCGRAFKSFDVECEIMKSIRHRNLIKVISSCSNEEFKALVLEY 759 (979)
Q Consensus 681 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~E~ 759 (979)
..+|+..+.||+|+||.||+|.+. ++..||||+++... ...+.|.+|++++++++||||++++++|.+++..++||||
T Consensus 219 ~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~E~ 297 (495)
T 1opk_A 219 RTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDT-MEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEF 297 (495)
T ss_dssp GGGEEEEEESGGGTTSSEEEEEEGGGTEEEEEEECCSSS-SCHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEEC
T ss_pred HHHceeeeEecCCCCeEEEEEEEcCCCeEEEEEEecCcc-cchHHHHHHHHHHHhcCCCCEeeEEEEEecCCcEEEEEEc
Confidence 356788899999999999999664 48899999997543 3457799999999999999999999999999999999999
Q ss_pred cCCCccceeeccC-CCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCEEeCCCCcEEEEeeccccccCCCCCc
Q 002021 760 MPHGSLEKYLYSS-NCILDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFSIAKMLTGEDQS 838 (979)
Q Consensus 760 ~~~g~L~~~l~~~-~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~i~H~Dik~~NIll~~~~~~kl~Dfg~~~~~~~~~~~ 838 (979)
+++|+|.+++... ...+++..++.++.||+.||+||| +++|+||||||+||+++.++.+||+|||+++...... .
T Consensus 298 ~~~g~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~LH---~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~-~ 373 (495)
T 1opk_A 298 MTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLE---KKNFIHRNLAARNCLVGENHLVKVADFGLSRLMTGDT-Y 373 (495)
T ss_dssp CTTCBHHHHHHHSCTTTSCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECGGGCEEECCTTCEECCTTCC-E
T ss_pred cCCCCHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHH---hCCcccCCCChhhEEECCCCcEEEeecccceeccCCc-e
Confidence 9999999999764 346899999999999999999999 9999999999999999999999999999998764322 2
Q ss_pred ceecccccCCCCCCccccCCCCCCCchhHHHHHHHHHHHHc-CCCCCcccccCcchHhHhhhhhcCCccchhhcccccCc
Q 002021 839 MIQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFT-GKKPTDEIFNGEMTLKHWVNDWLPISTMEVVDANLLSQ 917 (979)
Q Consensus 839 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~t-g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 917 (979)
.......+++.|+|||.+....++.++|||||||++|||+| |+.||......+ ....+...
T Consensus 374 ~~~~~~~~~~~y~aPE~~~~~~~~~~sDvwSlG~~l~el~t~g~~p~~~~~~~~--~~~~~~~~---------------- 435 (495)
T 1opk_A 374 TAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQ--VYELLEKD---------------- 435 (495)
T ss_dssp ECCTTCCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCCGGG--HHHHHHTT----------------
T ss_pred eecCCCcCCcceeCHhHHhcCCCCcHHhHHhHHHHHHHHHhCCCCCCCCCCHHH--HHHHHHcC----------------
Confidence 22234456789999999988899999999999999999999 999987532211 11111100
Q ss_pred hhhhhHHHHHHHHHHHHHHHhccccCcCCCCCHHHHHHHHHHhH
Q 002021 918 EDIHFVAKEQCVSFVFNLAMECTMEFPKQRINAKEIVTKLLKIR 961 (979)
Q Consensus 918 ~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~eil~~L~~~~ 961 (979)
.+...+..++..+.++|.+||+.||++|||+.|+++.|+++.
T Consensus 436 --~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~el~~~L~~~~ 477 (495)
T 1opk_A 436 --YRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMF 477 (495)
T ss_dssp --CCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTSC
T ss_pred --CCCCCCCCCCHHHHHHHHHHcCcChhHCcCHHHHHHHHHHHH
Confidence 011122356678999999999999999999999999999875
No 147
>3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* 4e20_A* 4e1z_A*
Probab=100.00 E-value=5.5e-39 Score=354.87 Aligned_cols=273 Identities=24% Similarity=0.399 Sum_probs=211.6
Q ss_pred CCCCceeeeecceEEEEEEc-----CCCcEEEEEEeccccc-cchhcHHHHHHHHHhcCCCCeeeEEEeecc--CCeeEE
Q 002021 684 FSENNLIGRGGFGSVYKASL-----GDGMEVAVKVFTSQCG-RAFKSFDVECEIMKSIRHRNLIKVISSCSN--EEFKAL 755 (979)
Q Consensus 684 ~~~~~~lG~G~~g~Vy~~~~-----~~~~~vAvK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~~~~--~~~~~l 755 (979)
|+..+.||+|+||.||+|.+ .+++.||||++..... ...+.+.+|++++++++||||+++++++.+ ....++
T Consensus 33 ~~~~~~lG~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~l 112 (318)
T 3lxp_A 33 LKKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADAGPQHRSGWKQEIDILRTLYHEHIIKYKGCCEDAGAASLQL 112 (318)
T ss_dssp EEEEEEEEECSSEEEEEEEECSCC--CCEEEEEEEECTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTTTEEEE
T ss_pred HhhhheecCCCCeEEEEEEEccCCCCCCcEEEEEEeccccChHHHHHHHHHHHHHHhCCCcchhhEEEEEecCCCceEEE
Confidence 47889999999999998854 2688999999976532 335678899999999999999999999976 467899
Q ss_pred EEEecCCCccceeeccCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCEEeCCCCcEEEEeeccccccCCC
Q 002021 756 VLEYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFSIAKMLTGE 835 (979)
Q Consensus 756 v~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~i~H~Dik~~NIll~~~~~~kl~Dfg~~~~~~~~ 835 (979)
||||+++|+|.+++... .+++.+++.++.|++.|++||| +++|+||||||+||+++.++.+||+|||++......
T Consensus 113 v~e~~~~~~L~~~l~~~--~~~~~~~~~i~~~l~~~l~~LH---~~~ivH~Dikp~Nil~~~~~~~kl~Dfg~a~~~~~~ 187 (318)
T 3lxp_A 113 VMEYVPLGSLRDYLPRH--SIGLAQLLLFAQQICEGMAYLH---AQHYIHRDLAARNVLLDNDRLVKIGDFGLAKAVPEG 187 (318)
T ss_dssp EECCCTTCBHHHHGGGS--CCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECTTCCEEECCGGGCEECCTT
T ss_pred EEecccCCcHHHHHhhC--CCCHHHHHHHHHHHHHHHHHHH---hCCccCCCCchheEEEcCCCCEEECCcccccccccc
Confidence 99999999999999765 4899999999999999999999 999999999999999999999999999999877543
Q ss_pred CCc-ceecccccCCCCCCccccCCCCCCCchhHHHHHHHHHHHHcCCCCCcccccCcchHhHhhhhhcC-Cccchhhccc
Q 002021 836 DQS-MIQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFTGKKPTDEIFNGEMTLKHWVNDWLP-ISTMEVVDAN 913 (979)
Q Consensus 836 ~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~tg~~P~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~ 913 (979)
... .......+|..|+|||.+.+..++.++||||+|+++|||++|+.||............+...... ....+..+..
T Consensus 188 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 267 (318)
T 3lxp_A 188 HEYYRVREDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYELLTHCDSSQSPPTKFLELIGIAQGQMTVLRLTELLERG 267 (318)
T ss_dssp CSEEEC---CCCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHHCSCCHHHHHHHHHHHHHTT
T ss_pred ccccccccCCCCCceeeChHHhcCCCCCcHHHHHHHHHHHHHHHhCCCcccccchhhhhhhcccccchhHHHHHHHHhcc
Confidence 322 22334567888999999988889999999999999999999999986532211110000000000 0000011100
Q ss_pred ccCchhhhhHHHHHHHHHHHHHHHhccccCcCCCCCHHHHHHHHHHhHHhhccC
Q 002021 914 LLSQEDIHFVAKEQCVSFVFNLAMECTMEFPKQRINAKEIVTKLLKIRDSLLRN 967 (979)
Q Consensus 914 ~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~eil~~L~~~~~~~~~~ 967 (979)
.....+..++.++.+++.+||+.||++|||+.|+++.|+++.+++...
T Consensus 268 ------~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~l~~~~~~~ 315 (318)
T 3lxp_A 268 ------ERLPRPDKCPAEVYHLMKNCWETEASFRPTFENLIPILKTVHEKYQGQ 315 (318)
T ss_dssp ------CCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHHHC-
T ss_pred ------cCCCCCccccHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHHHhhccC
Confidence 111122356678999999999999999999999999999999877543
No 148
>3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A*
Probab=100.00 E-value=4.4e-39 Score=356.78 Aligned_cols=249 Identities=22% Similarity=0.314 Sum_probs=195.5
Q ss_pred hCCCCCCceeeeecceEEEEEEc----CCCcEEEEEEecccc----ccchhcHHHHHHHHHhcCCCCeeeEEEeeccCCe
Q 002021 681 TDGFSENNLIGRGGFGSVYKASL----GDGMEVAVKVFTSQC----GRAFKSFDVECEIMKSIRHRNLIKVISSCSNEEF 752 (979)
Q Consensus 681 ~~~~~~~~~lG~G~~g~Vy~~~~----~~~~~vAvK~~~~~~----~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~ 752 (979)
.++|+..+.||+|+||.||+|.. .+|+.||||++.... ......+.+|+++++.++||||+++++++.+++.
T Consensus 16 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~ 95 (327)
T 3a62_A 16 PECFELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVKHPFIVDLIYAFQTGGK 95 (327)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEECSSTTTTCEEEEEEECCC--------------HHHHHHHCCCTTBCCEEEEEECSSC
T ss_pred HHHeEEEEEEEeCCCEEEEEEEEeccCCCCcEEEEEEEEHHHhhhhhhHHHHHHHHHHHHHhCCCCCccceeEEEEcCCE
Confidence 36788999999999999999965 578999999987542 2234567889999999999999999999999999
Q ss_pred eEEEEEecCCCccceeeccCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCEEeCCCCcEEEEeecccccc
Q 002021 753 KALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFSIAKML 832 (979)
Q Consensus 753 ~~lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~i~H~Dik~~NIll~~~~~~kl~Dfg~~~~~ 832 (979)
.++||||+++|+|.+++...+ .+++..+..++.|++.||+||| +++|+||||||+||+++.++.+||+|||+++..
T Consensus 96 ~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~qi~~al~~lH---~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~~~~~ 171 (327)
T 3a62_A 96 LYLILEYLSGGELFMQLEREG-IFMEDTACFYLAEISMALGHLH---QKGIIYRDLKPENIMLNHQGHVKLTDFGLCKES 171 (327)
T ss_dssp EEEEEECCTTEEHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCTTTEEECTTSCEEECCCSCC---
T ss_pred EEEEEeCCCCCcHHHHHHhCC-CCCHHHHHHHHHHHHHHHHHHH---hCCEEcccCCHHHeEECCCCcEEEEeCCccccc
Confidence 999999999999999987643 5899999999999999999999 899999999999999999999999999999764
Q ss_pred CCCCCcceecccccCCCCCCccccCCCCCCCchhHHHHHHHHHHHHcCCCCCcccccCcchHhHhhhhhcCCccchhhcc
Q 002021 833 TGEDQSMIQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFTGKKPTDEIFNGEMTLKHWVNDWLPISTMEVVDA 912 (979)
Q Consensus 833 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 912 (979)
.... .......||+.|+|||++.+..++.++||||+|+++|||++|+.||......+ ..........
T Consensus 172 ~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~-~~~~i~~~~~---------- 238 (327)
T 3a62_A 172 IHDG--TVTHTFCGTIEYMAPEILMRSGHNRAVDWWSLGALMYDMLTGAPPFTGENRKK-TIDKILKCKL---------- 238 (327)
T ss_dssp ---------CTTSSCCTTSCHHHHTTSCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHH-HHHHHHHTCC----------
T ss_pred ccCC--ccccccCCCcCccCHhhCcCCCCCCcccchhHHHHHHHHHHCCCCCCCCCHHH-HHHHHHhCCC----------
Confidence 3222 12244578999999999998899999999999999999999999997532111 1111111000
Q ss_pred cccCchhhhhHHHHHHHHHHHHHHHhccccCcCCCC-----CHHHHHHH
Q 002021 913 NLLSQEDIHFVAKEQCVSFVFNLAMECTMEFPKQRI-----NAKEIVTK 956 (979)
Q Consensus 913 ~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rp-----s~~eil~~ 956 (979)
..+..++.++.+++.+||+.||++|| ++.|+++|
T Consensus 239 ----------~~p~~~~~~~~~li~~~L~~dp~~R~~~~~~~~~e~l~h 277 (327)
T 3a62_A 239 ----------NLPPYLTQEARDLLKKLLKRNAASRLGAGPGDAGEVQAH 277 (327)
T ss_dssp ----------CCCTTSCHHHHHHHHHHSCSCGGGSTTSSTTTHHHHHHS
T ss_pred ----------CCCCCCCHHHHHHHHHHHhcCHhhccCCCCCCHHHHHcC
Confidence 01123456789999999999999999 78888876
No 149
>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens}
Probab=100.00 E-value=7.6e-39 Score=352.48 Aligned_cols=245 Identities=21% Similarity=0.203 Sum_probs=195.2
Q ss_pred CCCCCCceeeeecceEEEEEEc-CCCcEEEEEEecccccc--chhcHHHHHHHHHhc-CCCCeeeEEEeeccCCeeEEEE
Q 002021 682 DGFSENNLIGRGGFGSVYKASL-GDGMEVAVKVFTSQCGR--AFKSFDVECEIMKSI-RHRNLIKVISSCSNEEFKALVL 757 (979)
Q Consensus 682 ~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vAvK~~~~~~~~--~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lv~ 757 (979)
++|+..+.||+|+||+||+|.. .+|+.||||++...... ....+..|+..+.++ +||||++++++|.+++..++||
T Consensus 57 ~~y~~~~~LG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~~~~~~~h~~iv~l~~~~~~~~~~~lv~ 136 (311)
T 3p1a_A 57 QSFQRLSRLGHGSYGEVFKVRSKEDGRLYAVKRSMSPFRGPKDRARKLAEVGSHEKVGQHPCCVRLEQAWEEGGILYLQT 136 (311)
T ss_dssp HHEEEEEEEEEETTEEEEEEEETTTSCEEEEEEESSSCCSHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEE
T ss_pred hheeeeheeccCCCeEEEEEEECCCCeEEEEEEecccccChHHHHHHHHHHHHHHHhcCCCcEEEEEEEEEeCCEEEEEE
Confidence 5688899999999999999965 47999999998654322 223444555555555 8999999999999999999999
Q ss_pred EecCCCccceeeccCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCEEeCCCCcEEEEeeccccccCCCCC
Q 002021 758 EYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFSIAKMLTGEDQ 837 (979)
Q Consensus 758 E~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~i~H~Dik~~NIll~~~~~~kl~Dfg~~~~~~~~~~ 837 (979)
||+ +++|.+++...+..+++..++.++.|++.||+||| +++|+||||||+||+++.++.+||+|||++.......
T Consensus 137 e~~-~~~L~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH---~~~ivH~Dikp~NIll~~~~~~kl~DFG~a~~~~~~~- 211 (311)
T 3p1a_A 137 ELC-GPSLQQHCEAWGASLPEAQVWGYLRDTLLALAHLH---SQGLVHLDVKPANIFLGPRGRCKLGDFGLLVELGTAG- 211 (311)
T ss_dssp ECC-CCBHHHHHHHHCSCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECGGGCEEECCCTTCEECC----
T ss_pred ecc-CCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH---HCCEecCCCCHHHEEECCCCCEEEccceeeeecccCC-
Confidence 999 66999998877777999999999999999999999 8999999999999999999999999999998764322
Q ss_pred cceecccccCCCCCCccccCCCCCCCchhHHHHHHHHHHHHcCCCCCcccccCcchHhHhhhhhcCCccchhhcccccCc
Q 002021 838 SMIQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFTGKKPTDEIFNGEMTLKHWVNDWLPISTMEVVDANLLSQ 917 (979)
Q Consensus 838 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 917 (979)
......||+.|+|||++.+ .++.++|||||||++|||++|..|+... .........
T Consensus 212 --~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~el~~g~~~~~~~----~~~~~~~~~----------------- 267 (311)
T 3p1a_A 212 --AGEVQEGDPRYMAPELLQG-SYGTAADVFSLGLTILEVACNMELPHGG----EGWQQLRQG----------------- 267 (311)
T ss_dssp -----CCCCCGGGCCGGGGGT-CCSTHHHHHHHHHHHHHHHHTCCCCSSH----HHHHHHTTT-----------------
T ss_pred --CCcccCCCccccCHhHhcC-CCCchhhHHHHHHHHHHHHhCCCCCCCc----cHHHHHhcc-----------------
Confidence 2244568999999998875 7899999999999999999997765431 111111000
Q ss_pred hhhhhHHHHHHHHHHHHHHHhccccCcCCCCCHHHHHHH
Q 002021 918 EDIHFVAKEQCVSFVFNLAMECTMEFPKQRINAKEIVTK 956 (979)
Q Consensus 918 ~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~eil~~ 956 (979)
......+..++.++.+++.+|++.||++|||+.|+++|
T Consensus 268 -~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~ell~h 305 (311)
T 3p1a_A 268 -YLPPEFTAGLSSELRSVLVMMLEPDPKLRATAEALLAL 305 (311)
T ss_dssp -CCCHHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHTS
T ss_pred -CCCcccccCCCHHHHHHHHHHcCCChhhCcCHHHHHhC
Confidence 00112233456779999999999999999999999875
No 150
>3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A*
Probab=100.00 E-value=3.6e-39 Score=359.37 Aligned_cols=254 Identities=21% Similarity=0.279 Sum_probs=202.9
Q ss_pred CCCCCCceeeeecceEEEEEEc-CCCcEEEEEEecccc---ccchhcHHHHHHHHHhc-CCCCeeeEEEeeccCCeeEEE
Q 002021 682 DGFSENNLIGRGGFGSVYKASL-GDGMEVAVKVFTSQC---GRAFKSFDVECEIMKSI-RHRNLIKVISSCSNEEFKALV 756 (979)
Q Consensus 682 ~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vAvK~~~~~~---~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lv 756 (979)
++|+..+.||+|+||.||+|+. .+++.||||++.... ....+.+.+|+++++++ +||||+++++++.+++..++|
T Consensus 9 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~~~~~~lv 88 (345)
T 3a8x_A 9 QDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFFV 88 (345)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGSCSHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEE
T ss_pred hheEEEEEEEecCCeEEEEEEECCCCCEEEEEEEEhHHhcchHHHHHHHHHHHHHHhcCCCCccCeEEEEEEeCCEEEEE
Confidence 5688899999999999999954 578999999997543 22345678899999988 899999999999999999999
Q ss_pred EEecCCCccceeeccCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCEEeCCCCcEEEEeeccccccCCCC
Q 002021 757 LEYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFSIAKMLTGED 836 (979)
Q Consensus 757 ~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~i~H~Dik~~NIll~~~~~~kl~Dfg~~~~~~~~~ 836 (979)
|||+++|+|.+++...+ .+++..++.++.||+.||+||| +++|+||||||+||+++.++.+||+|||+++......
T Consensus 89 ~e~~~gg~L~~~l~~~~-~l~~~~~~~~~~qi~~aL~~LH---~~~ivHrDlkp~NIll~~~g~~kL~DFG~a~~~~~~~ 164 (345)
T 3a8x_A 89 IEYVNGGDLMFHMQRQR-KLPEEHARFYSAEISLALNYLH---ERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPG 164 (345)
T ss_dssp ECCCCSCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHH---HTTCBCCCCCGGGEEECTTSCEEECCGGGCBCSCCTT
T ss_pred EeCCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHH---HCCceecCCCHHHEEECCCCCEEEEeccccccccCCC
Confidence 99999999999987643 6899999999999999999999 9999999999999999999999999999998643222
Q ss_pred CcceecccccCCCCCCccccCCCCCCCchhHHHHHHHHHHHHcCCCCCcccccCcch---HhHhhhhhcCCccchhhccc
Q 002021 837 QSMIQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFTGKKPTDEIFNGEMT---LKHWVNDWLPISTMEVVDAN 913 (979)
Q Consensus 837 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~tg~~P~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~ 913 (979)
......+||+.|+|||++.+..++.++||||+||++|||++|+.||......... ....... .+....
T Consensus 165 --~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~-------~i~~~~ 235 (345)
T 3a8x_A 165 --DTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQ-------VILEKQ 235 (345)
T ss_dssp --CCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTTTC-------CHHHHHH-------HHHHCC
T ss_pred --CcccccCCCccccCccccCCCCCChHHhHHHHHHHHHHHHhCCCCcCCcccccccccccHHHHHH-------HHHcCC
Confidence 1234567999999999999989999999999999999999999999653211100 0000000 000000
Q ss_pred ccCchhhhhHHHHHHHHHHHHHHHhccccCcCCCCCH------HHHHHH
Q 002021 914 LLSQEDIHFVAKEQCVSFVFNLAMECTMEFPKQRINA------KEIVTK 956 (979)
Q Consensus 914 ~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~------~eil~~ 956 (979)
...+..++.++.+++.+|++.||++||++ .|+++|
T Consensus 236 --------~~~p~~~s~~~~~li~~lL~~dP~~R~~~~~~~~~~~i~~h 276 (345)
T 3a8x_A 236 --------IRIPRSLSVKAASVLKSFLNKDPKERLGCHPQTGFADIQGH 276 (345)
T ss_dssp --------CCCCTTSCHHHHHHHHHHTCSSTTTSTTCCTTTHHHHHHTS
T ss_pred --------CCCCCCCCHHHHHHHHHHhcCCHhHCCCCCCcCCHHHHhcC
Confidence 00112345678999999999999999995 677765
No 151
>1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A*
Probab=100.00 E-value=4.6e-38 Score=351.61 Aligned_cols=278 Identities=23% Similarity=0.339 Sum_probs=216.6
Q ss_pred ccHHHHHHhhCCCCCCceeeeecceEEEEEEcCCCcEEEEEEeccccccchhcHHHHHHHHHh--cCCCCeeeEEEeecc
Q 002021 672 FSYLELCRATDGFSENNLIGRGGFGSVYKASLGDGMEVAVKVFTSQCGRAFKSFDVECEIMKS--IRHRNLIKVISSCSN 749 (979)
Q Consensus 672 ~~~~~~~~~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~--l~h~niv~l~~~~~~ 749 (979)
.+........++|+..+.||+|+||.||+|+. +|+.||||++... ..+.+.+|+++++. ++||||+++++++..
T Consensus 32 ~~~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~---~~~~~~~e~~~~~~~~l~h~ni~~~~~~~~~ 107 (342)
T 1b6c_B 32 LPLLVQRTIARTIVLQESIGKGRFGEVWRGKW-RGEEVAVKIFSSR---EERSWFREAEIYQTVMLRHENILGFIAADNK 107 (342)
T ss_dssp SCHHHHHHHHHHCEEEEEEEEETTEEEEEEEE-TTEEEEEEEECGG---GHHHHHHHHHHHHHSCCCCTTBCCEEEEEEC
T ss_pred CceeecccccccEEEEeeecCCCCcEEEEEEE-cCccEEEEEeCch---hHHHHHHHHHHHHHhhcCCCcEEEEEeeecc
Confidence 34444455567899999999999999999987 5899999998643 34567789999888 789999999999977
Q ss_pred CC----eeEEEEEecCCCccceeeccCCCCCCHHHHHHHHHHHHHHHHHHhcCC-----CCCeEecCCCCCCEEeCCCCc
Q 002021 750 EE----FKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGY-----SAPVIHCDLKPSNVLLDDNMV 820 (979)
Q Consensus 750 ~~----~~~lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~-----~~~i~H~Dik~~NIll~~~~~ 820 (979)
.. ..++||||+++|+|.+++... .+++.+++.++.|++.|++|||... +++|+||||||+||+++.++.
T Consensus 108 ~~~~~~~~~lv~e~~~~g~L~~~l~~~--~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dlkp~NIll~~~~~ 185 (342)
T 1b6c_B 108 DNGTWTQLWLVSDYHEHGSLFDYLNRY--TVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGT 185 (342)
T ss_dssp CCSSCCCEEEEECCCTTCBHHHHHHHC--CBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCEEECSCCSGGGEEECTTSC
T ss_pred cCCccceeEEEEeecCCCcHHHHHhcc--CccHHHHHHHHHHHHHHHHHHHHHHhhhcccCCeeeCCCCHHHEEECCCCC
Confidence 65 789999999999999999764 5899999999999999999999321 479999999999999999999
Q ss_pred EEEEeeccccccCCCCCcc--eecccccCCCCCCccccCCC------CCCCchhHHHHHHHHHHHHcC----------CC
Q 002021 821 AHLSDFSIAKMLTGEDQSM--IQTQTLATIGYMAPEYGREG------RVSANGDVYSFGIMLMETFTG----------KK 882 (979)
Q Consensus 821 ~kl~Dfg~~~~~~~~~~~~--~~~~~~gt~~y~aPE~~~~~------~~~~~~DvwslG~il~el~tg----------~~ 882 (979)
+||+|||++.......... ......||+.|+|||.+.+. .+++++||||||+++|||+|| ..
T Consensus 186 ~kL~Dfg~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~el~tg~~~~~~~~~~~~ 265 (342)
T 1b6c_B 186 CCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQL 265 (342)
T ss_dssp EEECCCTTCEEEETTTTEEEECCCSCCCCGGGCCHHHHTSCCCTTCHHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCC
T ss_pred EEEEECCCceeccccccccccccccCCcCcccCCHhhhcccccccccccCCcccHHHHHHHHHHHHhccCcCCccccccc
Confidence 9999999998765433221 22445789999999998765 334789999999999999999 67
Q ss_pred CCcccccCcchHhHhhhhhcCCccchhhcccccCchhhhhHHHHHHHHHHHHHHHhccccCcCCCCCHHHHHHHHHHhHH
Q 002021 883 PTDEIFNGEMTLKHWVNDWLPISTMEVVDANLLSQEDIHFVAKEQCVSFVFNLAMECTMEFPKQRINAKEIVTKLLKIRD 962 (979)
Q Consensus 883 P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~eil~~L~~~~~ 962 (979)
||............+.......... ...........++..+.+++.+||+.||++|||+.|++++|+++.+
T Consensus 266 p~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~i~~~L~~i~~ 336 (342)
T 1b6c_B 266 PYYDLVPSDPSVEEMRKVVCEQKLR---------PNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQLSQ 336 (342)
T ss_dssp TTTTTSCSSCCHHHHHHHHTTSCCC---------CCCCGGGGTSHHHHHHHHHHHHHCCSSGGGSCCHHHHHHHHHHHHH
T ss_pred CccccCcCcccHHHHHHHHHHHHhC---------CCCcccccchhHHHHHHHHHHHHhccChhhCCCHHHHHHHHHHHHH
Confidence 7765444333333332222111110 0000111223567789999999999999999999999999999987
Q ss_pred hh
Q 002021 963 SL 964 (979)
Q Consensus 963 ~~ 964 (979)
+.
T Consensus 337 ~~ 338 (342)
T 1b6c_B 337 QE 338 (342)
T ss_dssp TT
T ss_pred Hh
Confidence 64
No 152
>3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A*
Probab=100.00 E-value=4.7e-39 Score=348.96 Aligned_cols=259 Identities=24% Similarity=0.393 Sum_probs=207.2
Q ss_pred hCCCCCCceeeeecceEEEEEEcC----CCcEEEEEEecccc-ccchhcHHHHHHHHHhcCCCCeeeEEEeeccCCeeEE
Q 002021 681 TDGFSENNLIGRGGFGSVYKASLG----DGMEVAVKVFTSQC-GRAFKSFDVECEIMKSIRHRNLIKVISSCSNEEFKAL 755 (979)
Q Consensus 681 ~~~~~~~~~lG~G~~g~Vy~~~~~----~~~~vAvK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 755 (979)
.++|+..+.||+|+||.||+|... ++..||||++.... ....+.+.+|+++++.++||||+++++++.++ ..++
T Consensus 11 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~-~~~~ 89 (281)
T 3cc6_A 11 REDVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKLIGIIEEE-PTWI 89 (281)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEEECTTCCEEEEEEEECCTTSCHHHHHHHHHHHHHHHHHCCTTBCCEEEEECSS-SCEE
T ss_pred ccceEEEEEEEecCCeeEEEeEEcCCCCCcceEEEEecccccCchHHHHHHHHHHHHHhCCCCCcceEEEEEcCC-CCEE
Confidence 467888899999999999999642 23469999987553 23456788999999999999999999998754 5689
Q ss_pred EEEecCCCccceeeccCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCEEeCCCCcEEEEeeccccccCCC
Q 002021 756 VLEYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFSIAKMLTGE 835 (979)
Q Consensus 756 v~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~i~H~Dik~~NIll~~~~~~kl~Dfg~~~~~~~~ 835 (979)
||||+++++|.+++......+++..++.++.|++.|++||| +++|+||||||+||+++.++.+||+|||.+......
T Consensus 90 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~ 166 (281)
T 3cc6_A 90 IMELYPYGELGHYLERNKNSLKVLTLVLYSLQICKAMAYLE---SINCVHRDIAVRNILVASPECVKLGDFGLSRYIEDE 166 (281)
T ss_dssp EEECCTTCBHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCSGGGEEEEETTEEEECCCCGGGCC---
T ss_pred EEecCCCCCHHHHHHhccccCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCccceEEECCCCcEEeCccCCCcccccc
Confidence 99999999999999877667999999999999999999999 999999999999999999999999999999876433
Q ss_pred CCcceecccccCCCCCCccccCCCCCCCchhHHHHHHHHHHHHc-CCCCCcccccCcchHhHhhhhhcCCccchhhcccc
Q 002021 836 DQSMIQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFT-GKKPTDEIFNGEMTLKHWVNDWLPISTMEVVDANL 914 (979)
Q Consensus 836 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~t-g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 914 (979)
.. .......+|+.|+|||.+.+..+++++||||+|+++|||++ |+.||......+ ....+.....
T Consensus 167 ~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~llt~g~~p~~~~~~~~--~~~~~~~~~~----------- 232 (281)
T 3cc6_A 167 DY-YKASVTRLPIKWMSPESINFRRFTTASDVWMFAVCMWEILSFGKQPFFWLENKD--VIGVLEKGDR----------- 232 (281)
T ss_dssp -------CCCCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCGGG--HHHHHHHTCC-----------
T ss_pred cc-cccccCCCCcceeCchhhccCCCCchhccHHHHHHHHHHHhCCCCCcccCChHH--HHHHHhcCCC-----------
Confidence 21 22234457889999999988889999999999999999998 999986532221 1111110000
Q ss_pred cCchhhhhHHHHHHHHHHHHHHHhccccCcCCCCCHHHHHHHHHHhHHhh
Q 002021 915 LSQEDIHFVAKEQCVSFVFNLAMECTMEFPKQRINAKEIVTKLLKIRDSL 964 (979)
Q Consensus 915 ~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~eil~~L~~~~~~~ 964 (979)
...+..+++.+.+++.+||..||++|||+.|++++|+++.+..
T Consensus 233 -------~~~~~~~~~~l~~li~~~l~~~p~~Rps~~ell~~L~~~~~~~ 275 (281)
T 3cc6_A 233 -------LPKPDLCPPVLYTLMTRCWDYDPSDRPRFTELVCSLSDVYQME 275 (281)
T ss_dssp -------CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHH
T ss_pred -------CCCCCCCCHHHHHHHHHHccCCchhCcCHHHHHHHHHHHHHhh
Confidence 0011234567899999999999999999999999999988643
No 153
>1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ...
Probab=100.00 E-value=3.9e-39 Score=359.64 Aligned_cols=245 Identities=22% Similarity=0.237 Sum_probs=204.8
Q ss_pred CCCCCCceeeeecceEEEEEEc-CCCcEEEEEEecccc---ccchhcHHHHHHHHHhcCCCCeeeEEEeeccCCeeEEEE
Q 002021 682 DGFSENNLIGRGGFGSVYKASL-GDGMEVAVKVFTSQC---GRAFKSFDVECEIMKSIRHRNLIKVISSCSNEEFKALVL 757 (979)
Q Consensus 682 ~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vAvK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 757 (979)
++|+..+.||+|+||.||+|+. .+|+.||||++.... ....+.+.+|+++++.++||||+++++++.+.+..|+||
T Consensus 41 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~ 120 (350)
T 1rdq_E 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVM 120 (350)
T ss_dssp GGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred HHCEEEEEeecCcCcEEEEEEECCCCCEEEEEEEEhHHhccHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEcCCEEEEEE
Confidence 5788899999999999999954 579999999986542 234567888999999999999999999999999999999
Q ss_pred EecCCCccceeeccCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCEEeCCCCcEEEEeeccccccCCCCC
Q 002021 758 EYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFSIAKMLTGEDQ 837 (979)
Q Consensus 758 E~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~i~H~Dik~~NIll~~~~~~kl~Dfg~~~~~~~~~~ 837 (979)
||+++|+|.+++...+ .+++.+++.++.||+.||+||| +++|+||||||+||+++.++.+||+|||+++.....
T Consensus 121 e~~~gg~L~~~l~~~~-~~~~~~~~~~~~qi~~aL~~LH---~~~ivHrDlkp~NIll~~~g~~kL~DFg~a~~~~~~-- 194 (350)
T 1rdq_E 121 EYVAGGEMFSHLRRIG-RFSEPHARFYAAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR-- 194 (350)
T ss_dssp ECCTTCBHHHHHHHHC-CCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECTTSCEEECCCTTCEECSSC--
T ss_pred cCCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHH---HCCcccccCccceEEECCCCCEEEcccccceeccCC--
Confidence 9999999999987643 5899999999999999999999 999999999999999999999999999999876432
Q ss_pred cceecccccCCCCCCccccCCCCCCCchhHHHHHHHHHHHHcCCCCCcccccCcchHhHhhhhhcCCccchhhcccccCc
Q 002021 838 SMIQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFTGKKPTDEIFNGEMTLKHWVNDWLPISTMEVVDANLLSQ 917 (979)
Q Consensus 838 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 917 (979)
.....||+.|+|||++.+..++.++||||+||++|||++|+.||...... ..+........
T Consensus 195 ---~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~-~~~~~i~~~~~--------------- 255 (350)
T 1rdq_E 195 ---TWTLCGTPEALAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPI-QIYEKIVSGKV--------------- 255 (350)
T ss_dssp ---BCCCEECGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHH-HHHHHHHHCCC---------------
T ss_pred ---cccccCCccccCHHHhcCCCCCCcCCEecccHhHhHHhhCCCCCCCCCHH-HHHHHHHcCCC---------------
Confidence 13457899999999999989999999999999999999999999753211 11111111000
Q ss_pred hhhhhHHHHHHHHHHHHHHHhccccCcCCCCC-----HHHHHHH
Q 002021 918 EDIHFVAKEQCVSFVFNLAMECTMEFPKQRIN-----AKEIVTK 956 (979)
Q Consensus 918 ~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps-----~~eil~~ 956 (979)
..+..++.++.+++.+|++.||++||+ ++|+++|
T Consensus 256 -----~~p~~~~~~~~~li~~lL~~dp~~R~~~~~~~~~ei~~h 294 (350)
T 1rdq_E 256 -----RFPSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNH 294 (350)
T ss_dssp -----CCCTTCCHHHHHHHHHHSCSCTTTCTTSSTTTTHHHHTS
T ss_pred -----CCCCCCCHHHHHHHHHHhhcCHHhccCCccCCHHHHHhC
Confidence 011234567899999999999999998 8888876
No 154
>3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens}
Probab=100.00 E-value=6e-39 Score=347.59 Aligned_cols=250 Identities=24% Similarity=0.385 Sum_probs=186.3
Q ss_pred hCCCCCCceeeeecceEEEEEEc-CCCcEEEEEEecccc---ccchhcHHHHHHHHHhcCCCCeeeEEEeeccCCeeEEE
Q 002021 681 TDGFSENNLIGRGGFGSVYKASL-GDGMEVAVKVFTSQC---GRAFKSFDVECEIMKSIRHRNLIKVISSCSNEEFKALV 756 (979)
Q Consensus 681 ~~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vAvK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 756 (979)
.++|+..+.||+|+||.||+|.. .+|+.||||++.... ....+.+.+|+++++.++||||+++++++.+.+..++|
T Consensus 10 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 89 (278)
T 3cok_A 10 IEDFKVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLKHPSILELYNYFEDSNYVYLV 89 (278)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTBCCTTBCCEEEEEECSSEEEEE
T ss_pred cccceeeeeecCCCceEEEEEEEccCCceEEEEEeehhhhhhhhHHHHHHHHHHHHHhCCCCCeEeEEEEEccCCeEEEE
Confidence 46788899999999999999954 689999999986442 22346788999999999999999999999999999999
Q ss_pred EEecCCCccceeeccCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCEEeCCCCcEEEEeeccccccCCCC
Q 002021 757 LEYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFSIAKMLTGED 836 (979)
Q Consensus 757 ~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~i~H~Dik~~NIll~~~~~~kl~Dfg~~~~~~~~~ 836 (979)
|||+++++|.+++......+++.+++.++.|+++|++||| +++|+||||||+||+++.++.+||+|||.+.......
T Consensus 90 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~~ 166 (278)
T 3cok_A 90 LEMCHNGEMNRYLKNRVKPFSENEARHFMHQIITGMLYLH---SHGILHRDLTLSNLLLTRNMNIKIADFGLATQLKMPH 166 (278)
T ss_dssp EECCTTEEHHHHHHTCSSCCCHHHHHHHHHHHHHHHHHHH---HTTEECSSCCGGGEEECTTCCEEECCCTTCEECC---
T ss_pred EecCCCCcHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCHHHEEEcCCCCEEEEeecceeeccCCC
Confidence 9999999999999877677999999999999999999999 9999999999999999999999999999998764322
Q ss_pred CcceecccccCCCCCCccccCCCCCCCchhHHHHHHHHHHHHcCCCCCcccccCcchHhHhhhhhcCCccchhhcccccC
Q 002021 837 QSMIQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFTGKKPTDEIFNGEMTLKHWVNDWLPISTMEVVDANLLS 916 (979)
Q Consensus 837 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 916 (979)
. ......||+.|+|||.+.+..++.++||||+|+++|||++|+.||......+. ... . .....
T Consensus 167 ~--~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~-~~~----~--------~~~~~-- 229 (278)
T 3cok_A 167 E--KHYTLCGTPNYISPEIATRSAHGLESDVWSLGCMFYTLLIGRPPFDTDTVKNT-LNK----V--------VLADY-- 229 (278)
T ss_dssp ---------------------------CTHHHHHHHHHHHHHHSSCSSCCCSCC----------C--------CSSCC--
T ss_pred C--cceeccCCCCcCCcchhcCCCCCchhhHHHHHHHHHHHHhCCCCCCChhHHHH-HHH----H--------hhccc--
Confidence 1 12345689999999999888899999999999999999999999875321111 000 0 00000
Q ss_pred chhhhhHHHHHHHHHHHHHHHhccccCcCCCCCHHHHHHH
Q 002021 917 QEDIHFVAKEQCVSFVFNLAMECTMEFPKQRINAKEIVTK 956 (979)
Q Consensus 917 ~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~eil~~ 956 (979)
..+..++.++.+++.+||+.||++|||+.|+++|
T Consensus 230 ------~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~h 263 (278)
T 3cok_A 230 ------EMPSFLSIEAKDLIHQLLRRNPADRLSLSSVLDH 263 (278)
T ss_dssp ------CCCTTSCHHHHHHHHHHSCSSGGGSCCHHHHTTS
T ss_pred ------CCccccCHHHHHHHHHHcccCHhhCCCHHHHhcC
Confidence 0112345668999999999999999999999875
No 155
>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A*
Probab=100.00 E-value=1.3e-38 Score=350.83 Aligned_cols=267 Identities=23% Similarity=0.312 Sum_probs=202.9
Q ss_pred hhCCCCCCceeeeecceEEEEEE-cCCCcEEEEEEecccc---ccchhcHHHHHHHHHhcCCCCeeeEEEeeccCCeeEE
Q 002021 680 ATDGFSENNLIGRGGFGSVYKAS-LGDGMEVAVKVFTSQC---GRAFKSFDVECEIMKSIRHRNLIKVISSCSNEEFKAL 755 (979)
Q Consensus 680 ~~~~~~~~~~lG~G~~g~Vy~~~-~~~~~~vAvK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 755 (979)
..++|+..+.||+|+||.||+|. ..+|+.||||++.... ....+.+.+|+++++.++||||+++++++.+++..++
T Consensus 30 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~l 109 (310)
T 2wqm_A 30 TLANFRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFIEDNELNI 109 (310)
T ss_dssp SGGGEEEEEEEECC--CEEEEEEETTTCCEEEEEEECTTSSCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEE
T ss_pred cccceEEEEeecCCCCceEEEEEEcCCCceEEEEeeehhhccCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCcEEE
Confidence 34678899999999999999995 4679999999987532 2345678899999999999999999999999999999
Q ss_pred EEEecCCCccceeecc---CCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCEEeCCCCcEEEEeecccccc
Q 002021 756 VLEYMPHGSLEKYLYS---SNCILDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFSIAKML 832 (979)
Q Consensus 756 v~E~~~~g~L~~~l~~---~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~i~H~Dik~~NIll~~~~~~kl~Dfg~~~~~ 832 (979)
||||+++++|.+++.. ....+++..++.++.|++.||+||| +++|+||||||+||+++.++.+||+|||++...
T Consensus 110 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH---~~~i~H~dl~p~NIl~~~~~~~kl~Dfg~~~~~ 186 (310)
T 2wqm_A 110 VLELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCSALEHMH---SRRVMHRDIKPANVFITATGVVKLGDLGLGRFF 186 (310)
T ss_dssp EEECCCSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEECTTSCEEECCC------
T ss_pred EEecCCCCCHHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHHh---hCCeeCCCCcHHHEEEcCCCCEEEEeccceeee
Confidence 9999999999998864 3456899999999999999999999 999999999999999999999999999999865
Q ss_pred CCCCCcceecccccCCCCCCccccCCCCCCCchhHHHHHHHHHHHHcCCCCCcccccCcchHhHhhhhhcCCccchhhcc
Q 002021 833 TGEDQSMIQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFTGKKPTDEIFNGEMTLKHWVNDWLPISTMEVVDA 912 (979)
Q Consensus 833 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 912 (979)
..... ......+++.|+|||.+.+..++.++||||||+++|||++|+.||.............+.... ..
T Consensus 187 ~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~---~~----- 256 (310)
T 2wqm_A 187 SSKTT--AAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLYSLCKKIEQCD---YP----- 256 (310)
T ss_dssp --------------CCSSCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTC---CCHHHHHHHHHTTC---SC-----
T ss_pred cCCCc--cccccCCCeeEeChHHhCCCCCCchhhHHHHHHHHHHHHhCCCCCcccchhHHHHHHHhhccc---CC-----
Confidence 43221 123456899999999999889999999999999999999999998653222111111111000 00
Q ss_pred cccCchhhhhHHHHHHHHHHHHHHHhccccCcCCCCCHHHHHHHHHHhHHhhccCC
Q 002021 913 NLLSQEDIHFVAKEQCVSFVFNLAMECTMEFPKQRINAKEIVTKLLKIRDSLLRNV 968 (979)
Q Consensus 913 ~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~eil~~L~~~~~~~~~~~ 968 (979)
......++.++.+++.+||..||++|||+.|++++|+++........
T Consensus 257 ---------~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~il~~l~~l~~~~~~~~ 303 (310)
T 2wqm_A 257 ---------PLPSDHYSEELRQLVNMCINPDPEKRPDVTYVYDVAKRMHACTASSL 303 (310)
T ss_dssp ---------CCCTTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHHC---
T ss_pred ---------CCcccccCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHHhhhhhh
Confidence 00012345678999999999999999999999999999998776554
No 156
>3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II}
Probab=100.00 E-value=9.6e-39 Score=357.62 Aligned_cols=257 Identities=22% Similarity=0.283 Sum_probs=200.6
Q ss_pred hhCCCCCCceeeeecceEEEEEE-cCCCcEEEEEEeccc-----cccchhcHHHHHHHHHhcCCCCeeeEEEeeccCCee
Q 002021 680 ATDGFSENNLIGRGGFGSVYKAS-LGDGMEVAVKVFTSQ-----CGRAFKSFDVECEIMKSIRHRNLIKVISSCSNEEFK 753 (979)
Q Consensus 680 ~~~~~~~~~~lG~G~~g~Vy~~~-~~~~~~vAvK~~~~~-----~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~ 753 (979)
..++|+..+.||+|+||.||+|. ..+++.||||++... .....+.+.+|++++++++||||+++++++.+.+..
T Consensus 24 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~ 103 (345)
T 3hko_A 24 LQKKYHLKGAIGQGSYGVVRVAIENQTRAIRAIKIMNKNKIRQINPKDVERIKTEVRLMKKLHHPNIARLYEVYEDEQYI 103 (345)
T ss_dssp HHHHEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHC---CHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEE
T ss_pred hhhheeecceeeecCCeEEEEEEECCCCceEEEeehhhhhhcccCHHHHHHHHHHHHHHHhCCCCCcceeehhhccCCeE
Confidence 45679999999999999999995 467889999998643 234456788999999999999999999999999999
Q ss_pred EEEEEecCCCccceeeccC---------------------------------------CCCCCHHHHHHHHHHHHHHHHH
Q 002021 754 ALVLEYMPHGSLEKYLYSS---------------------------------------NCILDIFQRLNIMIDVASALEY 794 (979)
Q Consensus 754 ~lv~E~~~~g~L~~~l~~~---------------------------------------~~~l~~~~~~~i~~~ia~~L~~ 794 (979)
++||||+++|+|.+++... ...+++..++.++.|++.||+|
T Consensus 104 ~lv~e~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~ 183 (345)
T 3hko_A 104 CLVMELCHGGHLLDKLNVFIDDSTGKCAMDVVKTQICPCPECNEEAINGSIHGFRESLDFVQREKLISNIMRQIFSALHY 183 (345)
T ss_dssp EEEEECCCSCBHHHHEEEEEETTTTEEEEEEECCCCCCSHHHHHHHHHSCC--CEEECCHHHHHHHHHHHHHHHHHHHHH
T ss_pred EEEEeCCCCCcHHHHHHHhhcccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHH
Confidence 9999999999999988521 1123577888999999999999
Q ss_pred HhcCCCCCeEecCCCCCCEEeCCCC--cEEEEeeccccccCCCCC--cceecccccCCCCCCccccCC--CCCCCchhHH
Q 002021 795 LHFGYSAPVIHCDLKPSNVLLDDNM--VAHLSDFSIAKMLTGEDQ--SMIQTQTLATIGYMAPEYGRE--GRVSANGDVY 868 (979)
Q Consensus 795 LH~~~~~~i~H~Dik~~NIll~~~~--~~kl~Dfg~~~~~~~~~~--~~~~~~~~gt~~y~aPE~~~~--~~~~~~~Dvw 868 (979)
|| +++|+||||||+||+++.++ .+||+|||++..+..... ........||+.|+|||.+.+ ..+++++|||
T Consensus 184 LH---~~~ivH~Dlkp~NIll~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~Diw 260 (345)
T 3hko_A 184 LH---NQGICHRDIKPENFLFSTNKSFEIKLVDFGLSKEFYKLNNGEYYGMTTKAGTPYFVAPEVLNTTNESYGPKCDAW 260 (345)
T ss_dssp HH---HTTEECCCCCGGGEEESCSSSCCEEECCCTTCEEGGGTTCC--------CCCGGGCCHHHHTCSSSCCCTHHHHH
T ss_pred HH---HCCccccCCChhhEEEecCCCceEEEeeccccccccccCccccccccccCCCccccCchhhccCCCCCCcHHHHH
Confidence 99 89999999999999998776 899999999986543221 222345679999999998865 6789999999
Q ss_pred HHHHHHHHHHcCCCCCcccccCcchHhHhhhhhcCCccchhhcccccCchhhhhHHHHHHHHHHHHHHHhccccCcCCCC
Q 002021 869 SFGIMLMETFTGKKPTDEIFNGEMTLKHWVNDWLPISTMEVVDANLLSQEDIHFVAKEQCVSFVFNLAMECTMEFPKQRI 948 (979)
Q Consensus 869 slG~il~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rp 948 (979)
|+|+++|||++|+.||......+. ......... ....+....+++++.+++.+|++.||.+||
T Consensus 261 slG~il~el~~g~~pf~~~~~~~~-~~~~~~~~~----------------~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp 323 (345)
T 3hko_A 261 SAGVLLHLLLMGAVPFPGVNDADT-ISQVLNKKL----------------CFENPNYNVLSPLARDLLSNLLNRNVDERF 323 (345)
T ss_dssp HHHHHHHHHHHSSCSSCCSSHHHH-HHHHHHCCC----------------CTTSGGGGGSCHHHHHHHHHHSCSCTTTSC
T ss_pred HHHHHHHHHHHCCCCCCCCChHHH-HHHHHhccc----------------ccCCcccccCCHHHHHHHHHHcCCChhHCC
Confidence 999999999999999975322211 111111000 001112223567799999999999999999
Q ss_pred CHHHHHHH
Q 002021 949 NAKEIVTK 956 (979)
Q Consensus 949 s~~eil~~ 956 (979)
++.|+++|
T Consensus 324 s~~~~l~h 331 (345)
T 3hko_A 324 DAMRALQH 331 (345)
T ss_dssp CHHHHHHS
T ss_pred CHHHHhcC
Confidence 99999886
No 157
>3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A
Probab=100.00 E-value=9e-39 Score=353.81 Aligned_cols=249 Identities=20% Similarity=0.250 Sum_probs=182.2
Q ss_pred CceeeeecceEEEEEEc-CCCcEEEEEEeccccccchhcHHHHHHHHHhcC-CCCeeeEEEeeccCCeeEEEEEecCCCc
Q 002021 687 NNLIGRGGFGSVYKASL-GDGMEVAVKVFTSQCGRAFKSFDVECEIMKSIR-HRNLIKVISSCSNEEFKALVLEYMPHGS 764 (979)
Q Consensus 687 ~~~lG~G~~g~Vy~~~~-~~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~~~~lv~E~~~~g~ 764 (979)
.+.||+|+||.||+|.. .+++.||||++... ....+.+|+++++.++ ||||+++++++.+++..++||||+++|+
T Consensus 16 ~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~---~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e~~~~~~ 92 (325)
T 3kn6_A 16 DKPLGEGSFSICRKCVHKKSNQAFAVKIISKR---MEANTQKEITALKLCEGHPNIVKLHEVFHDQLHTFLVMELLNGGE 92 (325)
T ss_dssp SCCSEEETTEEEEEEEETTTCCEEEEEEEEGG---GHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEECCCCSCB
T ss_pred CCccccCCCeEEEEEEECCCCCEEEEEEEChh---hhhhHHHHHHHHHHhcCCCCeeEEEEEEEcCCEEEEEEEccCCCc
Confidence 47899999999999954 57899999998643 3456788999999997 9999999999999999999999999999
Q ss_pred cceeeccCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCEEeCCCC---cEEEEeeccccccCCCCCccee
Q 002021 765 LEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNM---VAHLSDFSIAKMLTGEDQSMIQ 841 (979)
Q Consensus 765 L~~~l~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~i~H~Dik~~NIll~~~~---~~kl~Dfg~~~~~~~~~~~~~~ 841 (979)
|.+++... ..+++.++..++.|++.||+||| +++|+||||||+||+++.++ .+||+|||+++...... ...
T Consensus 93 L~~~l~~~-~~~~~~~~~~i~~qi~~~l~~LH---~~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~~~~~--~~~ 166 (325)
T 3kn6_A 93 LFERIKKK-KHFSETEASYIMRKLVSAVSHMH---DVGVVHRDLKPENLLFTDENDNLEIKIIDFGFARLKPPDN--QPL 166 (325)
T ss_dssp HHHHHHHC-SCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEEEC----CEEEECCCTTCEECCC-------
T ss_pred HHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHH---HCCCeecCCCHHHEEEecCCCcccEEEeccccceecCCCC--Ccc
Confidence 99999775 36899999999999999999999 99999999999999998665 89999999998654322 222
Q ss_pred cccccCCCCCCccccCCCCCCCchhHHHHHHHHHHHHcCCCCCcccccCc--chHhHhhhhhcCCccchhhcccccCchh
Q 002021 842 TQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFTGKKPTDEIFNGE--MTLKHWVNDWLPISTMEVVDANLLSQED 919 (979)
Q Consensus 842 ~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~tg~~P~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 919 (979)
....||+.|+|||++.+..++.++||||+||++|||++|+.||....... ........... .....
T Consensus 167 ~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~~~~~~~~i~------------~~~~~ 234 (325)
T 3kn6_A 167 KTPCFTLHYAAPELLNQNGYDESCDLWSLGVILYTMLSGQVPFQSHDRSLTCTSAVEIMKKIK------------KGDFS 234 (325)
T ss_dssp -----------------CCCCHHHHHHHHHHHHHHHHHSSCTTC-------CCCHHHHHHHHT------------TTCCC
T ss_pred cccCCCcCccCHHHhcCCCCCCccchHHHHHHHHHHHhCCCCCCCCccccccccHHHHHHHHH------------cCCCC
Confidence 44568999999999999999999999999999999999999997633211 01111111111 00111
Q ss_pred hhhHHHHHHHHHHHHHHHhccccCcCCCCCHHHHHHH
Q 002021 920 IHFVAKEQCVSFVFNLAMECTMEFPKQRINAKEIVTK 956 (979)
Q Consensus 920 ~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~eil~~ 956 (979)
.....+..++.++.+++.+|++.||++|||+.|+++|
T Consensus 235 ~~~~~~~~~s~~~~~li~~~L~~dP~~Rpt~~ell~h 271 (325)
T 3kn6_A 235 FEGEAWKNVSQEAKDLIQGLLTVDPNKRLKMSGLRYN 271 (325)
T ss_dssp CCSHHHHTSCHHHHHHHHHHHCCCTTTCCCTTTSTTC
T ss_pred CCcccccCCCHHHHHHHHHHCCCChhHCCCHHHHhcC
Confidence 1112334567789999999999999999999998865
No 158
>3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=2.3e-38 Score=346.73 Aligned_cols=262 Identities=23% Similarity=0.388 Sum_probs=209.0
Q ss_pred CCCCceeeeecceEEEEEEc-CC---CcEEEEEEeccccc-cchhcHHHHHHHHHhcCCCCeeeEEEeeccCCee-EEEE
Q 002021 684 FSENNLIGRGGFGSVYKASL-GD---GMEVAVKVFTSQCG-RAFKSFDVECEIMKSIRHRNLIKVISSCSNEEFK-ALVL 757 (979)
Q Consensus 684 ~~~~~~lG~G~~g~Vy~~~~-~~---~~~vAvK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~-~lv~ 757 (979)
|+..+.||+|+||.||+|.. .+ +..||+|++..... ...+.+.+|+++++.++||||+++++++.+.+.. ++||
T Consensus 23 ~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~v~ 102 (298)
T 3pls_A 23 THSDRVIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRITEMQQVEAFLREGLLMRGLNHPNVLALIGIMLPPEGLPHVLL 102 (298)
T ss_dssp EEEEEEEEEETTEEEEEEEEECSSSCEEEEEEEEETTCCSHHHHHHHHHHHHHHHTCCCTTBCCCCEEECCSSSCCEEEE
T ss_pred EccCceeccCCCceEEEEEEecCCCceeeeeeeeccccccHHHHHHHHHHHHHHHhCCCCCeeeEEEEEecCCCCcEEEE
Confidence 45568999999999999964 22 33799999875432 3456788999999999999999999999766554 9999
Q ss_pred EecCCCccceeeccCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCEEeCCCCcEEEEeeccccccCCCCC
Q 002021 758 EYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFSIAKMLTGEDQ 837 (979)
Q Consensus 758 E~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~i~H~Dik~~NIll~~~~~~kl~Dfg~~~~~~~~~~ 837 (979)
||+.+|+|.+++......+++.+++.++.|++.||+||| +++|+||||||+||+++.++.+||+|||++........
T Consensus 103 e~~~~~~L~~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH---~~~i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~~~~~ 179 (298)
T 3pls_A 103 PYMCHGDLLQFIRSPQRNPTVKDLISFGLQVARGMEYLA---EQKFVHRDLAARNCMLDESFTVKVADFGLARDILDREY 179 (298)
T ss_dssp CCCTTCBHHHHHHCTTCCCBHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEECTTCCEEECCTTSSCTTTTGGG
T ss_pred ecccCCCHHHHHhccccCCCHHHHHHHHHHHHHHHHHHH---hCCcccCCCCcceEEEcCCCcEEeCcCCCcccccCCcc
Confidence 999999999999887778999999999999999999999 89999999999999999999999999999986543221
Q ss_pred --cceecccccCCCCCCccccCCCCCCCchhHHHHHHHHHHHHcCCCCCcccccCcchHhHhhhhhcCCccchhhccccc
Q 002021 838 --SMIQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFTGKKPTDEIFNGEMTLKHWVNDWLPISTMEVVDANLL 915 (979)
Q Consensus 838 --~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 915 (979)
........+|+.|+|||.+.+..+++++||||+|+++|||++|..|+....... .....+.....
T Consensus 180 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~~~~~~~~~~-~~~~~~~~~~~------------ 246 (298)
T 3pls_A 180 YSVQQHRHARLPVKWTALESLQTYRFTTKSDVWSFGVLLWELLTRGAPPYRHIDPF-DLTHFLAQGRR------------ 246 (298)
T ss_dssp GCSCCSSCTTCGGGGSCHHHHTTCCCCHHHHHHHHHHHHHHHHHTSCCTTTTSCGG-GHHHHHHTTCC------------
T ss_pred cccccCcCCCCCccccChhhhccCCCChhhchhhHHHHHHHHhhCCCCCCccCCHH-HHHHHhhcCCC------------
Confidence 122234567889999999999999999999999999999999766654322221 11111111110
Q ss_pred CchhhhhHHHHHHHHHHHHHHHhccccCcCCCCCHHHHHHHHHHhHHhhccC
Q 002021 916 SQEDIHFVAKEQCVSFVFNLAMECTMEFPKQRINAKEIVTKLLKIRDSLLRN 967 (979)
Q Consensus 916 ~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~eil~~L~~~~~~~~~~ 967 (979)
...+..++..+.+++.+||+.||++|||+.|+++.|+++.+++...
T Consensus 247 ------~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~l~~~~~~l~~~ 292 (298)
T 3pls_A 247 ------LPQPEYCPDSLYQVMQQCWEADPAVRPTFRVLVGEVEQIVSALLGD 292 (298)
T ss_dssp ------CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHCCSC
T ss_pred ------CCCCccchHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHHHhcc
Confidence 0111234567899999999999999999999999999999876543
No 159
>1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=6.2e-39 Score=356.72 Aligned_cols=260 Identities=27% Similarity=0.462 Sum_probs=204.2
Q ss_pred CCCCCCceeeeecceEEEEEEcCC-----CcEEEEEEeccccc-cchhcHHHHHHHHHhcCCCCeeeEEEeeccCCeeEE
Q 002021 682 DGFSENNLIGRGGFGSVYKASLGD-----GMEVAVKVFTSQCG-RAFKSFDVECEIMKSIRHRNLIKVISSCSNEEFKAL 755 (979)
Q Consensus 682 ~~~~~~~~lG~G~~g~Vy~~~~~~-----~~~vAvK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 755 (979)
..|+..+.||+|+||.||+|.... +..||||++..... .....+.+|+++++.++||||+++++++.+.+..++
T Consensus 44 ~~~~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~l 123 (333)
T 1mqb_A 44 SCVTRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHNIIRLEGVISKYKPMMI 123 (333)
T ss_dssp TTEEEEEEEEECSSSEEEEEEEEC---CCEEEEEEEEECTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEE
T ss_pred HHhhcccEEecCCCeEEEEEEEecCCCCccccEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEecCCCcEE
Confidence 456667899999999999996432 34699999875432 334578899999999999999999999999999999
Q ss_pred EEEecCCCccceeeccCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCEEeCCCCcEEEEeeccccccCCC
Q 002021 756 VLEYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFSIAKMLTGE 835 (979)
Q Consensus 756 v~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~i~H~Dik~~NIll~~~~~~kl~Dfg~~~~~~~~ 835 (979)
||||+++|+|.+++......+++.+++.++.|++.||+||| +++|+||||||+||+++.++.+||+|||++......
T Consensus 124 v~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH---~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~~~~~~~~ 200 (333)
T 1mqb_A 124 ITEYMENGALDKFLREKDGEFSVLQLVGMLRGIAAGMKYLA---NMNYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDD 200 (333)
T ss_dssp EEECCTTEEHHHHHHHTTTCSCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEECTTCCEEECCCCC-------
T ss_pred EEeCCCCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHH---hCCeeCCCCChheEEECCCCcEEECCCCcchhhccc
Confidence 99999999999999877678999999999999999999999 899999999999999999999999999999876433
Q ss_pred CC-cceecccccCCCCCCccccCCCCCCCchhHHHHHHHHHHHHc-CCCCCcccccCcchHhHhhhhhcCCccchhhccc
Q 002021 836 DQ-SMIQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFT-GKKPTDEIFNGEMTLKHWVNDWLPISTMEVVDAN 913 (979)
Q Consensus 836 ~~-~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~t-g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 913 (979)
.. ........+|+.|+|||.+.+..++.++||||+|+++|||++ |+.||...... .....+....
T Consensus 201 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~pf~~~~~~--~~~~~~~~~~----------- 267 (333)
T 1mqb_A 201 PEATYTTSGGKIPIRWTAPEAISYRKFTSASDVWSFGIVMWEVMTYGERPYWELSNH--EVMKAINDGF----------- 267 (333)
T ss_dssp ----------CCCGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHH--HHHHHHHTTC-----------
T ss_pred cccccccCCCCccccccCchhcccCCCCchhhhHHHHHHHHHHHcCCCCCcccCCHH--HHHHHHHCCC-----------
Confidence 22 112233456788999999988899999999999999999999 99998653221 1111110000
Q ss_pred ccCchhhhhHHHHHHHHHHHHHHHhccccCcCCCCCHHHHHHHHHHhHHhh
Q 002021 914 LLSQEDIHFVAKEQCVSFVFNLAMECTMEFPKQRINAKEIVTKLLKIRDSL 964 (979)
Q Consensus 914 ~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~eil~~L~~~~~~~ 964 (979)
+.+.+..++..+.+++.+||+.||++||++.|++++|+++.+..
T Consensus 268 -------~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~L~~~~~~~ 311 (333)
T 1mqb_A 268 -------RLPTPMDCPSAIYQLMMQCWQQERARRPKFADIVSILDKLIRAP 311 (333)
T ss_dssp -------CCCCCTTCBHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHHHSG
T ss_pred -------cCCCcccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhcc
Confidence 00111235567899999999999999999999999999988743
No 160
>2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A*
Probab=100.00 E-value=3.7e-39 Score=359.72 Aligned_cols=249 Identities=20% Similarity=0.257 Sum_probs=204.3
Q ss_pred hCCCCCCceeeeecceEEEEEEc-CCCcEEEEEEecccc---ccchhcHHHHHHHHHhc-CCCCeeeEEEeeccCCeeEE
Q 002021 681 TDGFSENNLIGRGGFGSVYKASL-GDGMEVAVKVFTSQC---GRAFKSFDVECEIMKSI-RHRNLIKVISSCSNEEFKAL 755 (979)
Q Consensus 681 ~~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vAvK~~~~~~---~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~l 755 (979)
.++|+..+.||+|+||.||+|+. .+|+.||||++.... ....+.+..|.+++..+ +||+|+++++++.+.+..|+
T Consensus 19 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~~~~~~l 98 (353)
T 2i0e_A 19 LTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLYF 98 (353)
T ss_dssp CTTEEEEEEEEEETTEEEEEEEETTEEEEEEEEEEEHHHHHHTTCHHHHHHHHHHHTCTTCCTTBCCEEEEEECSSEEEE
T ss_pred hHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhcchHHHHHHHHHHHHHhcCCCCEEeeEEEEEEcCCEEEE
Confidence 46799999999999999999965 458899999987542 23456678899999988 79999999999999999999
Q ss_pred EEEecCCCccceeeccCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCEEeCCCCcEEEEeeccccccCCC
Q 002021 756 VLEYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFSIAKMLTGE 835 (979)
Q Consensus 756 v~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~i~H~Dik~~NIll~~~~~~kl~Dfg~~~~~~~~ 835 (979)
||||+++|+|.+++...+ .+++.+++.++.||+.||+||| +++|+||||||+||+++.++.+||+|||+++.....
T Consensus 99 v~E~~~gg~L~~~l~~~~-~~~~~~~~~~~~qi~~aL~~LH---~~givHrDlkp~NIll~~~g~vkL~DFG~a~~~~~~ 174 (353)
T 2i0e_A 99 VMEYVNGGDLMYHIQQVG-RFKEPHAVFYAAEIAIGLFFLQ---SKGIIYRDLKLDNVMLDSEGHIKIADFGMCKENIWD 174 (353)
T ss_dssp EEECCCSCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHH---HTTCBCCCCCGGGEEECTTSCEEECCCTTCBCCCCT
T ss_pred EEeCCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---HCCEEeccCCHHHEEEcCCCcEEEEeCCcccccccC
Confidence 999999999999987643 5899999999999999999999 999999999999999999999999999999864322
Q ss_pred CCcceecccccCCCCCCccccCCCCCCCchhHHHHHHHHHHHHcCCCCCcccccCcchHhHhhhhhcCCccchhhccccc
Q 002021 836 DQSMIQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFTGKKPTDEIFNGEMTLKHWVNDWLPISTMEVVDANLL 915 (979)
Q Consensus 836 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 915 (979)
. ......+||+.|+|||++.+..++.++||||+||++|||++|+.||...... ..+........
T Consensus 175 ~--~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~~-~~~~~i~~~~~------------- 238 (353)
T 2i0e_A 175 G--VTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDED-ELFQSIMEHNV------------- 238 (353)
T ss_dssp T--CCBCCCCSCGGGCCHHHHTTCCBSTHHHHHHHHHHHHHHHHSSCSSCCSSHH-HHHHHHHHCCC-------------
T ss_pred C--cccccccCCccccChhhhcCCCcCCcccccchHHHHHHHHcCCCCCCCCCHH-HHHHHHHhCCC-------------
Confidence 2 2234567999999999999899999999999999999999999999753211 11111111000
Q ss_pred CchhhhhHHHHHHHHHHHHHHHhccccCcCCCCC-----HHHHHHH
Q 002021 916 SQEDIHFVAKEQCVSFVFNLAMECTMEFPKQRIN-----AKEIVTK 956 (979)
Q Consensus 916 ~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps-----~~eil~~ 956 (979)
..+..++.++.+++.+|++.||++||+ +.|+++|
T Consensus 239 -------~~p~~~s~~~~~li~~lL~~dP~~R~~~~~~~~~~i~~h 277 (353)
T 2i0e_A 239 -------AYPKSMSKEAVAICKGLMTKHPGKRLGCGPEGERDIKEH 277 (353)
T ss_dssp -------CCCTTSCHHHHHHHHHHTCSCTTSCTTCSTTHHHHHHTS
T ss_pred -------CCCCCCCHHHHHHHHHHhhcCHHHcCCCCCCCHHHHhcC
Confidence 011234567899999999999999995 6888776
No 161
>3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A*
Probab=100.00 E-value=6e-39 Score=354.04 Aligned_cols=263 Identities=25% Similarity=0.409 Sum_probs=199.3
Q ss_pred hhCCCCCCceeeeecceEEEEEEcC----CCcEEEEEEecccc--ccchhcHHHHHHHHHhcCCCCeeeEEEeeccCC--
Q 002021 680 ATDGFSENNLIGRGGFGSVYKASLG----DGMEVAVKVFTSQC--GRAFKSFDVECEIMKSIRHRNLIKVISSCSNEE-- 751 (979)
Q Consensus 680 ~~~~~~~~~~lG~G~~g~Vy~~~~~----~~~~vAvK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~-- 751 (979)
..++|...+.||+|+||.||+|... +++.||||++.... ....+.+.+|++++++++||||+++++++.+.+
T Consensus 32 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~ 111 (313)
T 3brb_A 32 DRNLLILGKILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDFSHPNVIRLLGVCIEMSSQ 111 (313)
T ss_dssp CGGGEEEEEEEEC-CCCCEEEEEEECTTSCEEEEEEEEC---CCCHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEC----
T ss_pred CHHHeeeccceeecCCeEEEEEEEeccCCceeEEEEEEEeccccchhHHHHHHHHHHHHhcCCCCCeeeeeEEEeecccc
Confidence 3466888899999999999999542 35589999987542 233467889999999999999999999987654
Q ss_pred ---eeEEEEEecCCCccceeecc-----CCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCEEeCCCCcEEE
Q 002021 752 ---FKALVLEYMPHGSLEKYLYS-----SNCILDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHL 823 (979)
Q Consensus 752 ---~~~lv~E~~~~g~L~~~l~~-----~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~i~H~Dik~~NIll~~~~~~kl 823 (979)
..++||||+++|+|.+++.. ....+++.+++.++.|+++||+||| +++|+||||||+||+++.++.+||
T Consensus 112 ~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH---~~~ivH~dikp~NIli~~~~~~kl 188 (313)
T 3brb_A 112 GIPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIALGMEYLS---NRNFLHRDLAARNCMLRDDMTVCV 188 (313)
T ss_dssp ---CEEEEEECCTTCBHHHHHHHTTBTTSCCCCCHHHHHHHHHHHHHHHHHHH---TTTCCCCCCSGGGEEECTTSCEEE
T ss_pred CCcccEEEEecccCCCHHHHHHHhhhhcCCccCCHHHHHHHHHHHHHHHHHHH---hCCcccCCCCcceEEEcCCCcEEE
Confidence 35999999999999999842 2356899999999999999999999 999999999999999999999999
Q ss_pred EeeccccccCCCCCcceecccccCCCCCCccccCCCCCCCchhHHHHHHHHHHHHc-CCCCCcccccCcchHhHhhhhhc
Q 002021 824 SDFSIAKMLTGEDQSMIQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFT-GKKPTDEIFNGEMTLKHWVNDWL 902 (979)
Q Consensus 824 ~Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~t-g~~P~~~~~~~~~~~~~~~~~~~ 902 (979)
+|||++................+++.|+|||.+.+..+++++||||||+++|||++ |..||......+. .........
T Consensus 189 ~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~-~~~~~~~~~ 267 (313)
T 3brb_A 189 ADFGLSKKIYSGDYYRQGRIAKMPVKWIAIESLADRVYTSKSDVWAFGVTMWEIATRGMTPYPGVQNHEM-YDYLLHGHR 267 (313)
T ss_dssp CSCSCC----------------CCGGGSCHHHHHSSCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGGGH-HHHHHTTCC
T ss_pred eecCcceecccccccCcccccCCCccccCchhhcCCCccchhhhHHHHHHHHHHHhcCCCCCccCCHHHH-HHHHHcCCC
Confidence 99999987654333333344567889999999988899999999999999999999 8888865322211 111111000
Q ss_pred CCccchhhcccccCchhhhhHHHHHHHHHHHHHHHhccccCcCCCCCHHHHHHHHHHhHHhhc
Q 002021 903 PISTMEVVDANLLSQEDIHFVAKEQCVSFVFNLAMECTMEFPKQRINAKEIVTKLLKIRDSLL 965 (979)
Q Consensus 903 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~eil~~L~~~~~~~~ 965 (979)
...+..++..+.+++.+||..||++|||+.|++++|+++.++..
T Consensus 268 -------------------~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~l~~~lp 311 (313)
T 3brb_A 268 -------------------LKQPEDCLDELYEIMYSCWRTDPLDRPTFSVLRLQLEKLLESLP 311 (313)
T ss_dssp -------------------CCCBTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHHHC-
T ss_pred -------------------CCCCccccHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHhcC
Confidence 01112455679999999999999999999999999999987653
No 162
>2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A
Probab=100.00 E-value=1.9e-38 Score=351.23 Aligned_cols=252 Identities=21% Similarity=0.304 Sum_probs=205.9
Q ss_pred hCCCCCCceeeeecceEEEEEE-cCCCcEEEEEEecccccc------chhcHHHHHHHHHhcCCCCeeeEEEeeccCCee
Q 002021 681 TDGFSENNLIGRGGFGSVYKAS-LGDGMEVAVKVFTSQCGR------AFKSFDVECEIMKSIRHRNLIKVISSCSNEEFK 753 (979)
Q Consensus 681 ~~~~~~~~~lG~G~~g~Vy~~~-~~~~~~vAvK~~~~~~~~------~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~ 753 (979)
.+.|+..+.||+|+||.||+|. ..+|+.||||++...... ..+.+.+|+++++.++||||+++++++.+++..
T Consensus 11 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~ 90 (321)
T 2a2a_A 11 EDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVITLHDVYENRTDV 90 (321)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSSSCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEE
T ss_pred hccEEEeeEeeecCCEEEEEEEECCCCeEEEEEEEecccccccccchhHHHHHHHHHHHHhCCCCCcceEEEEEecCCEE
Confidence 3568889999999999999995 457999999998654321 246688999999999999999999999999999
Q ss_pred EEEEEecCCCccceeeccCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCEEeCCCC----cEEEEeeccc
Q 002021 754 ALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNM----VAHLSDFSIA 829 (979)
Q Consensus 754 ~lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~i~H~Dik~~NIll~~~~----~~kl~Dfg~~ 829 (979)
++||||+++++|.+++... ..+++..++.++.|++.||+||| +++|+||||||+||+++.++ .+||+|||++
T Consensus 91 ~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~i~~qi~~aL~~lH---~~~ivH~dikp~NIl~~~~~~~~~~~kl~Dfg~~ 166 (321)
T 2a2a_A 91 VLILELVSGGELFDFLAQK-ESLSEEEATSFIKQILDGVNYLH---TKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLA 166 (321)
T ss_dssp EEEECCCCSCBHHHHHHTC-SCEEHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEESCTTSSSCCEEECCCTTC
T ss_pred EEEEEcCCCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCChHHEEEecCCCCcCCEEEccCccc
Confidence 9999999999999999764 36899999999999999999999 99999999999999999887 7999999999
Q ss_pred cccCCCCCcceecccccCCCCCCccccCCCCCCCchhHHHHHHHHHHHHcCCCCCcccccCcchHhHhhhhhcCCccchh
Q 002021 830 KMLTGEDQSMIQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFTGKKPTDEIFNGEMTLKHWVNDWLPISTMEV 909 (979)
Q Consensus 830 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~ 909 (979)
....... ......||+.|+|||.+.+..++.++||||+|+++|||++|+.||......+ .........
T Consensus 167 ~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~-~~~~i~~~~-------- 234 (321)
T 2a2a_A 167 HEIEDGV---EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQE-TLANITSVS-------- 234 (321)
T ss_dssp EECCTTC---CCCCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSHHH-HHHHHHTTC--------
T ss_pred eecCccc---cccccCCCCCccCcccccCCCCCCccccHHHHHHHHHHHHCCCCCCCCCHHH-HHHHHHhcc--------
Confidence 8764322 1234568999999999998899999999999999999999999996532111 111110000
Q ss_pred hcccccCchhhhhHHHHHHHHHHHHHHHhccccCcCCCCCHHHHHHH
Q 002021 910 VDANLLSQEDIHFVAKEQCVSFVFNLAMECTMEFPKQRINAKEIVTK 956 (979)
Q Consensus 910 ~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~eil~~ 956 (979)
..........++..+.+++.+|+..||++|||+.|+++|
T Consensus 235 --------~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~e~l~h 273 (321)
T 2a2a_A 235 --------YDFDEEFFSHTSELAKDFIRKLLVKETRKRLTIQEALRH 273 (321)
T ss_dssp --------CCCCHHHHTTCCHHHHHHHHTTSCSSTTTSCCHHHHHHS
T ss_pred --------cccChhhhcccCHHHHHHHHHHcCCChhhCcCHHHHhcC
Confidence 000111223456678999999999999999999999975
No 163
>3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A
Probab=100.00 E-value=7.9e-39 Score=359.40 Aligned_cols=253 Identities=22% Similarity=0.254 Sum_probs=195.1
Q ss_pred hCCCCCCceeeeecceEEEEEEc-CCCcEEEEEEeccccccchhcHHHHHHHHHhcCCCCeeeEEEeeccCCeeEEEEEe
Q 002021 681 TDGFSENNLIGRGGFGSVYKASL-GDGMEVAVKVFTSQCGRAFKSFDVECEIMKSIRHRNLIKVISSCSNEEFKALVLEY 759 (979)
Q Consensus 681 ~~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~E~ 759 (979)
.++|+..+.||+|+||.||+|.. .+++.||||++.... ...+.+.+|+.+++.++||||+++++++.+++..++||||
T Consensus 19 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~ 97 (361)
T 3uc3_A 19 SDRYDFVKDIGSGNFGVARLMRDKLTKELVAVKYIERGA-AIDENVQREIINHRSLRHPNIVRFKEVILTPTHLAIIMEY 97 (361)
T ss_dssp TTTEEEEEEESSSTTSSEEEEEETTTCCEEEEEEEESST-TSCHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEEC
T ss_pred CCcEEEEEEeccCCCEEEEEEEECCCCcEEEEEEEecCc-cccHHHHHHHHHHHhCCCCCCCcEEEEEeeCCEEEEEEEe
Confidence 46799999999999999999954 579999999996543 2346688999999999999999999999999999999999
Q ss_pred cCCCccceeeccCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCEEeCCCCc--EEEEeeccccccCCCCC
Q 002021 760 MPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMV--AHLSDFSIAKMLTGEDQ 837 (979)
Q Consensus 760 ~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~i~H~Dik~~NIll~~~~~--~kl~Dfg~~~~~~~~~~ 837 (979)
+++|+|.+++...+ .+++..++.++.|++.||+||| +++|+||||||+||+++.++. +||+|||+++.....
T Consensus 98 ~~~~~L~~~l~~~~-~~~~~~~~~i~~ql~~~L~~LH---~~~ivH~Dlkp~Nill~~~~~~~~kl~Dfg~a~~~~~~-- 171 (361)
T 3uc3_A 98 ASGGELYERICNAG-RFSEDEARFFFQQLLSGVSYCH---SMQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLH-- 171 (361)
T ss_dssp CCSCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHH---HTTCCSCCCCGGGEEECSSSSCCEEECCCCCC--------
T ss_pred CCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCCHHHEEEcCCCCceEEEeecCcccccccc--
Confidence 99999999986643 5899999999999999999999 999999999999999987765 999999999753222
Q ss_pred cceecccccCCCCCCccccCCCCCCCc-hhHHHHHHHHHHHHcCCCCCcccccCcchHhHhhhhhcCCccchhhcccccC
Q 002021 838 SMIQTQTLATIGYMAPEYGREGRVSAN-GDVYSFGIMLMETFTGKKPTDEIFNGEMTLKHWVNDWLPISTMEVVDANLLS 916 (979)
Q Consensus 838 ~~~~~~~~gt~~y~aPE~~~~~~~~~~-~DvwslG~il~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 916 (979)
.......||+.|+|||++.+..+..+ +||||+||++|||++|+.||........ +...+.......
T Consensus 172 -~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~-~~~~~~~~~~~~----------- 238 (361)
T 3uc3_A 172 -SQPKSTVGTPAYIAPEVLLRQEYDGKIADVWSCGVTLYVMLVGAYPFEDPEEPRD-YRKTIQRILSVK----------- 238 (361)
T ss_dssp ----------CTTSCHHHHHCSSCCHHHHHHHHHHHHHHHHHHSSCSCC----CCC-HHHHHHHHHTTC-----------
T ss_pred -CCCCCCcCCCCcCChhhhcCCCCCCCeeeeehhHHHHHHHHhCCCCCCCCccHHH-HHHHHHHHhcCC-----------
Confidence 12244579999999999888777655 8999999999999999999976433222 111111111000
Q ss_pred chhhhhHHHHHHHHHHHHHHHhccccCcCCCCCHHHHHHH
Q 002021 917 QEDIHFVAKEQCVSFVFNLAMECTMEFPKQRINAKEIVTK 956 (979)
Q Consensus 917 ~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~eil~~ 956 (979)
...+....+++++.+++.+||+.||++|||+.|+++|
T Consensus 239 ---~~~~~~~~~s~~~~~li~~~L~~dP~~Rps~~ell~h 275 (361)
T 3uc3_A 239 ---YSIPDDIRISPECCHLISRIFVADPATRISIPEIKTH 275 (361)
T ss_dssp ---CCCCTTSCCCHHHHHHHHHHSCSCTTTSCCHHHHHTS
T ss_pred ---CCCCCcCCCCHHHHHHHHHHccCChhHCcCHHHHHhC
Confidence 0001111345678999999999999999999999987
No 164
>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens}
Probab=100.00 E-value=6e-39 Score=358.55 Aligned_cols=253 Identities=23% Similarity=0.357 Sum_probs=197.0
Q ss_pred hCCCCCCceeeeecceEEEEEEcCCCcEEEEEEecccc--ccchhcHHHHHHHHHhcCC--CCeeeEEEeeccCCeeEEE
Q 002021 681 TDGFSENNLIGRGGFGSVYKASLGDGMEVAVKVFTSQC--GRAFKSFDVECEIMKSIRH--RNLIKVISSCSNEEFKALV 756 (979)
Q Consensus 681 ~~~~~~~~~lG~G~~g~Vy~~~~~~~~~vAvK~~~~~~--~~~~~~~~~E~~~l~~l~h--~niv~l~~~~~~~~~~~lv 756 (979)
.+.|+..+.||+|+||.||+|...+++.||||++.... ....+.+.+|+++++.++| |||+++++++.+++..++|
T Consensus 8 ~~~y~i~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~~~~~~~~lv 87 (343)
T 3dbq_A 8 GRIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMV 87 (343)
T ss_dssp SCEEEEEEEESCCSSEEEEEEECTTSCEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEE
T ss_pred cCEEEEEEEEecCCCeEEEEEEeCCCCEEEEEEeeccccchHHHHHHHHHHHHHHhhhhcCCceEEEeeeEeeCCEEEEE
Confidence 35688899999999999999988889999999986543 2234678899999999986 9999999999999999999
Q ss_pred EEecCCCccceeeccCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCEEeCCCCcEEEEeeccccccCCCC
Q 002021 757 LEYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFSIAKMLTGED 836 (979)
Q Consensus 757 ~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~i~H~Dik~~NIll~~~~~~kl~Dfg~~~~~~~~~ 836 (979)
||+ .+++|.+++.... .+++.++..++.|++.||+||| +++|+||||||+||+++ ++.+||+|||++.......
T Consensus 88 ~e~-~~~~L~~~l~~~~-~~~~~~~~~i~~qi~~al~~lH---~~~iiHrDikp~NIll~-~~~~kl~DFG~a~~~~~~~ 161 (343)
T 3dbq_A 88 MEC-GNIDLNSWLKKKK-SIDPWERKSYWKNMLEAVHTIH---QHGIVHSDLKPANFLIV-DGMLKLIDFGIANQMQPDT 161 (343)
T ss_dssp ECC-CSEEHHHHHHHSC-CCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEEE-TTEEEECCCSSSCCC----
T ss_pred EeC-CCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCcceEEEE-CCcEEEeecccccccCccc
Confidence 995 5789999997753 6899999999999999999999 89999999999999997 5789999999998765443
Q ss_pred CcceecccccCCCCCCccccCC-----------CCCCCchhHHHHHHHHHHHHcCCCCCcccccCcchHhHhhhhhcCCc
Q 002021 837 QSMIQTQTLATIGYMAPEYGRE-----------GRVSANGDVYSFGIMLMETFTGKKPTDEIFNGEMTLKHWVNDWLPIS 905 (979)
Q Consensus 837 ~~~~~~~~~gt~~y~aPE~~~~-----------~~~~~~~DvwslG~il~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~ 905 (979)
.........||+.|+|||++.+ ..++.++||||+||++|||++|+.||....................
T Consensus 162 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~- 240 (343)
T 3dbq_A 162 TSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAIIDPNHEI- 240 (343)
T ss_dssp --------CCCCSSCCHHHHHHCC-----------CCHHHHHHHHHHHHHHHHHSSCTTTTCCSHHHHHHHHHCTTSCC-
T ss_pred ccccCCCCcCCcCcCCHHHHhhccccccccccccCCCchhhHHHHHHHHHHHHhCCCcchhhhhHHHHHHHHhcCCccc-
Confidence 3333445679999999998754 6788999999999999999999999975322211111111100000
Q ss_pred cchhhcccccCchhhhhHHHHHHHHHHHHHHHhccccCcCCCCCHHHHHHHH
Q 002021 906 TMEVVDANLLSQEDIHFVAKEQCVSFVFNLAMECTMEFPKQRINAKEIVTKL 957 (979)
Q Consensus 906 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~eil~~L 957 (979)
..+..++.++.+++.+||+.||.+|||+.|+++|-
T Consensus 241 -----------------~~~~~~~~~l~~li~~~L~~dp~~Rpt~~e~l~hp 275 (343)
T 3dbq_A 241 -----------------EFPDIPEKDLQDVLKCCLKRDPKQRISIPELLAHP 275 (343)
T ss_dssp -----------------CCCCCSCHHHHHHHHHHTCSSTTTSCCHHHHHTSH
T ss_pred -----------------CCcccCCHHHHHHHHHHcCCChhHCCCHHHHHhCc
Confidence 00112234688999999999999999999999874
No 165
>4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens}
Probab=100.00 E-value=9.7e-39 Score=363.85 Aligned_cols=277 Identities=19% Similarity=0.263 Sum_probs=212.5
Q ss_pred CCCCCCceeeeecceEEEEEEc-CCCcEEEEEEecccc-ccchhcHHHHHHHHHhcCCCCeeeEEEeeccCC--eeEEEE
Q 002021 682 DGFSENNLIGRGGFGSVYKASL-GDGMEVAVKVFTSQC-GRAFKSFDVECEIMKSIRHRNLIKVISSCSNEE--FKALVL 757 (979)
Q Consensus 682 ~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vAvK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~--~~~lv~ 757 (979)
+.|...+.||+|+||.||+|.. .+|+.||||++.... ....+.+.+|++++++++||||+++++++.+.+ ..++||
T Consensus 9 ~~y~i~~~LG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~lv~ 88 (396)
T 4eut_A 9 HLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFAIEEETTTRHKVLIM 88 (396)
T ss_dssp EEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECGGGGGSCHHHHHHHHHHHHHCCCTTBCCEEEEEECTTTCCEEEEE
T ss_pred CceEEEEEEEcCCCeEEEEEEECCCCcEEEEEEeccccccchHHHHHHHHHHHHhcCCCCCCeEEEeeccCCCCeeEEEE
Confidence 5688899999999999999954 469999999997543 234567789999999999999999999987654 779999
Q ss_pred EecCCCccceeeccCC--CCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCEEe----CCCCcEEEEeeccccc
Q 002021 758 EYMPHGSLEKYLYSSN--CILDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLL----DDNMVAHLSDFSIAKM 831 (979)
Q Consensus 758 E~~~~g~L~~~l~~~~--~~l~~~~~~~i~~~ia~~L~~LH~~~~~~i~H~Dik~~NIll----~~~~~~kl~Dfg~~~~ 831 (979)
||+++|+|.+++.... ..+++..++.++.|++.||+||| +++|+||||||+||++ +.++.+||+|||+++.
T Consensus 89 e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH---~~~ivH~Dlkp~NIll~~~~~~~~~~kL~DFG~a~~ 165 (396)
T 4eut_A 89 EFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLR---ENGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARE 165 (396)
T ss_dssp CCCTTEEHHHHTTSGGGTTCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEEEECTTSCEEEEECCGGGCEE
T ss_pred ecCCCCCHHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHHH---HCCEEECCcCHHHEEEeecCCCceeEEEecCCCceE
Confidence 9999999999997653 23899999999999999999999 9999999999999999 7888899999999987
Q ss_pred cCCCCCcceecccccCCCCCCccccCC--------CCCCCchhHHHHHHHHHHHHcCCCCCcccccCcchH---hHhhhh
Q 002021 832 LTGEDQSMIQTQTLATIGYMAPEYGRE--------GRVSANGDVYSFGIMLMETFTGKKPTDEIFNGEMTL---KHWVND 900 (979)
Q Consensus 832 ~~~~~~~~~~~~~~gt~~y~aPE~~~~--------~~~~~~~DvwslG~il~el~tg~~P~~~~~~~~~~~---~~~~~~ 900 (979)
..... ......||+.|+|||++.+ ..++.++|||||||++|||++|+.||.......... ......
T Consensus 166 ~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~~~~~~~~~~ 242 (396)
T 4eut_A 166 LEDDE---QFVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRRNKEVMYKIITG 242 (396)
T ss_dssp CCCGG---GSSCSSSCCTTCCHHHHHHHCC--CHHHHHHHHHHHHHHHHHHHHHHHSSCSEECTTCTTTCHHHHHHHHHS
T ss_pred ccCCC---ccccccCCccccCHHHhhccccccccccCCCcHHHHHHHHHHHHHHHHCCCCCCCCCcccchHHHHHHHhcC
Confidence 64322 2234579999999998764 567889999999999999999999997543322221 111111
Q ss_pred hcCCccchhhccc-----ccCchhhhhHHHHHHHHHHHHHHHhccccCcCCCCCHHHHHHHHHHhHHhh
Q 002021 901 WLPISTMEVVDAN-----LLSQEDIHFVAKEQCVSFVFNLAMECTMEFPKQRINAKEIVTKLLKIRDSL 964 (979)
Q Consensus 901 ~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~eil~~L~~~~~~~ 964 (979)
..+.....+.... ...............+..+.+++.+|++.||++||+++|+++.++++.+..
T Consensus 243 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~ll~~~L~~dP~~R~s~~e~l~~l~~il~~~ 311 (396)
T 4eut_A 243 KPSGAISGVQKAENGPIDWSGDMPVSCSLSRGLQVLLTPVLANILEADQEKCWGFDQFFAETSDILHRM 311 (396)
T ss_dssp CCTTCCEEEECSTTCCEEEESSCCTTCSSCHHHHHHHHHHHHHHSCCCTTTSCCHHHHHHHHHHHHTCE
T ss_pred CCcccchhheeccCCCcccCccCCcccccchHHHhhchHHHHHhhccChhhhccHHHHHHHHHHHhhce
Confidence 1111111000000 000000011122456678999999999999999999999999999988743
No 166
>2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis}
Probab=100.00 E-value=1e-38 Score=351.14 Aligned_cols=271 Identities=21% Similarity=0.248 Sum_probs=201.8
Q ss_pred hCCCCCCceeeeecceEEEEEEc-CCCcEEEEEEecccccc---chhcHHHHHHHHHhcCCCCeeeEEEeeccCCeeEEE
Q 002021 681 TDGFSENNLIGRGGFGSVYKASL-GDGMEVAVKVFTSQCGR---AFKSFDVECEIMKSIRHRNLIKVISSCSNEEFKALV 756 (979)
Q Consensus 681 ~~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vAvK~~~~~~~~---~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 756 (979)
.++|+..+.||+|+||.||+|.. .+++.||||++...... ..+.+.+|++++++++||||+++++++.+++..++|
T Consensus 33 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~lv 112 (309)
T 2h34_A 33 FGPYRLRRLVGRGGMGDVYEAEDTVRERIVALKLMSETLSSDPVFRTRMQREARTAGRLQEPHVVPIHDFGEIDGQLYVD 112 (309)
T ss_dssp -CCEEEEEEEEECSSSEEEEEEETTTTEEEEEEECGGGGGGSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEE
T ss_pred eccEEEEEEEcCCCCeeEEEEEEcCCCeEEEEEecCcccccCHHHHHHHHHHHHHHhhcCCCCeeEEEEEEeeCCeEEEE
Confidence 47899999999999999999964 57899999998754322 246788999999999999999999999999999999
Q ss_pred EEecCCCccceeeccCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCEEeCCCCcEEEEeeccccccCCCC
Q 002021 757 LEYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFSIAKMLTGED 836 (979)
Q Consensus 757 ~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~i~H~Dik~~NIll~~~~~~kl~Dfg~~~~~~~~~ 836 (979)
|||+++++|.+++.... .+++.+++.++.|++.|++||| +++|+||||||+||+++.++.+||+|||++.......
T Consensus 113 ~e~~~~~~L~~~l~~~~-~~~~~~~~~i~~qi~~~l~~lH---~~~i~H~dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~ 188 (309)
T 2h34_A 113 MRLINGVDLAAMLRRQG-PLAPPRAVAIVRQIGSALDAAH---AAGATHRDVKPENILVSADDFAYLVDFGIASATTDEK 188 (309)
T ss_dssp EECCCCEEHHHHHHHHC-SCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEECTTSCEEECSCCC--------
T ss_pred EEecCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---HCcCCcCCCChHHEEEcCCCCEEEecCccCccccccc
Confidence 99999999999987643 6899999999999999999999 9999999999999999999999999999998654322
Q ss_pred CcceecccccCCCCCCccccCCCCCCCchhHHHHHHHHHHHHcCCCCCcccccCcchHhHhhhhhcCCccchhhcccccC
Q 002021 837 QSMIQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFTGKKPTDEIFNGEMTLKHWVNDWLPISTMEVVDANLLS 916 (979)
Q Consensus 837 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 916 (979)
........+++.|+|||.+.+..++.++||||+|+++|||++|+.||...... .....+....+.
T Consensus 189 -~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~--~~~~~~~~~~~~------------ 253 (309)
T 2h34_A 189 -LTQLGNTVGTLYYMAPERFSESHATYRADIYALTCVLYECLTGSPPYQGDQLS--VMGAHINQAIPR------------ 253 (309)
T ss_dssp ---------CCGGGCCGGGTCC----CCCHHHHHHHHHHHHHHSSCSSCSCHHH--HHHHHHHSCCCC------------
T ss_pred -cccccccCCCcCccCHHHHcCCCCCchHhHHHHHHHHHHHHHCCCCCCCchHH--HHHHHhccCCCC------------
Confidence 12223456899999999999889999999999999999999999999753211 111111100000
Q ss_pred chhhhhHHHHHHHHHHHHHHHhccccCcCCCC-CHHHHHHHHHHhHHhhccCCCCccee
Q 002021 917 QEDIHFVAKEQCVSFVFNLAMECTMEFPKQRI-NAKEIVTKLLKIRDSLLRNVGGRCVR 974 (979)
Q Consensus 917 ~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rp-s~~eil~~L~~~~~~~~~~~~~~~~~ 974 (979)
....+..++.++.+++.+||+.||++|| +++|+++.|+++......+.....+|
T Consensus 254 ----~~~~~~~~~~~l~~li~~~l~~dP~~Rp~s~~~l~~~l~~~l~~~~~~~~~~~~~ 308 (309)
T 2h34_A 254 ----PSTVRPGIPVAFDAVIARGMAKNPEDRYVTCGDLSAAAHAALATADQDRATDILR 308 (309)
T ss_dssp ----GGGTSTTCCTHHHHHHHHHTCSSGGGSCSSHHHHHHHHHHTCC------------
T ss_pred ----ccccCCCCCHHHHHHHHHhccCCHHHHHHhHHHHHHHHHHHHHhhcccchhhhhh
Confidence 0011234556789999999999999999 99999999999887766555444443
No 167
>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus}
Probab=100.00 E-value=1.1e-38 Score=355.07 Aligned_cols=251 Identities=22% Similarity=0.315 Sum_probs=198.2
Q ss_pred hCCCCCCceeeeecceEEEEEEc-CCCcEEEEEEecccc-ccchhcHHHHHHHHHhcCCCCeeeEEEeeccCC-------
Q 002021 681 TDGFSENNLIGRGGFGSVYKASL-GDGMEVAVKVFTSQC-GRAFKSFDVECEIMKSIRHRNLIKVISSCSNEE------- 751 (979)
Q Consensus 681 ~~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vAvK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~------- 751 (979)
.++|+..+.||+|+||.||+|.. .+|+.||||++.... ....+.+.+|++++++++||||++++++|.+..
T Consensus 5 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~ 84 (332)
T 3qd2_B 5 LTDFEPIQCMGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYFNAWLETPPEKWQEE 84 (332)
T ss_dssp HHHEEEEEEEECC-CSEEEEEEETTTCCEEEEEEEECCSTTTHHHHHHHHHHHHTSCCCTTBCCEEEEEEECCSCHHHHH
T ss_pred hhcCceeeEecCCCCeEEEEEEEcCCCcEEEEEEeecCCchhHHHHHHHHHHHHHhCCCCCEeeEEEEEEEeccchhhhh
Confidence 35688899999999999999965 489999999987543 234577899999999999999999999885433
Q ss_pred --------------------------------------------------eeEEEEEecCCCccceeeccCC--CCCCHH
Q 002021 752 --------------------------------------------------FKALVLEYMPHGSLEKYLYSSN--CILDIF 779 (979)
Q Consensus 752 --------------------------------------------------~~~lv~E~~~~g~L~~~l~~~~--~~l~~~ 779 (979)
..++||||+++|+|.+++.... ...++.
T Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~ 164 (332)
T 3qd2_B 85 MDEIWLKDESTDWPLSSPSPMDAPSVKIRRMDPFSTKNTVGQLQPSSPKVYLYIQMQLCRKENLKDWMNRRCSLEDREHG 164 (332)
T ss_dssp HHC--------------------------------------------CCCEEEEEEECCCSSCHHHHHHTCCSGGGSCHH
T ss_pred hhhhhhccccccccccCCCcccccccceeeccccCcccccccccCCCCCceEEEEEEecCCCCHHHHHhcccCccchhhH
Confidence 3799999999999999997653 345677
Q ss_pred HHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCEEeCCCCcEEEEeeccccccCCCCCc----------ceecccccCCC
Q 002021 780 QRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFSIAKMLTGEDQS----------MIQTQTLATIG 849 (979)
Q Consensus 780 ~~~~i~~~ia~~L~~LH~~~~~~i~H~Dik~~NIll~~~~~~kl~Dfg~~~~~~~~~~~----------~~~~~~~gt~~ 849 (979)
.++.++.|++.||+||| +++|+||||||+||+++.++.+||+|||+++........ .......||+.
T Consensus 165 ~~~~i~~qi~~aL~~LH---~~~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~ 241 (332)
T 3qd2_B 165 VCLHIFIQIAEAVEFLH---SKGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYATHTGQVGTKL 241 (332)
T ss_dssp HHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEECTTCCEEECCCTTCEECSCC--------------CCCSCC-CGG
T ss_pred HHHHHHHHHHHHHHHHH---hCCeeecCCCcccEEEeCCCCEEEeecCcccccccchhhccccccccccccccccCCCcC
Confidence 78999999999999999 999999999999999999999999999999876543211 12234579999
Q ss_pred CCCccccCCCCCCCchhHHHHHHHHHHHHcCCCCCcccccCcchHhHhhhhhcCCccchhhcccccCchhhhhHHHHHHH
Q 002021 850 YMAPEYGREGRVSANGDVYSFGIMLMETFTGKKPTDEIFNGEMTLKHWVNDWLPISTMEVVDANLLSQEDIHFVAKEQCV 929 (979)
Q Consensus 850 y~aPE~~~~~~~~~~~DvwslG~il~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 929 (979)
|+|||.+.+..+++++||||+||++|||++|..|+..... ... ..... .........+
T Consensus 242 y~aPE~~~~~~~~~~~Di~slG~il~el~~~~~~~~~~~~----~~~---~~~~~---------------~~~~~~~~~~ 299 (332)
T 3qd2_B 242 YMSPEQIHGNNYSHKVDIFSLGLILFELLYSFSTQMERVR----IIT---DVRNL---------------KFPLLFTQKY 299 (332)
T ss_dssp GSCHHHHHCCCCCTHHHHHHHHHHHHHHHSCCCCHHHHHH----HHH---HHHTT---------------CCCHHHHHHC
T ss_pred ccChHHhcCCCCcchhhHHHHHHHHHHHHHcCCChhHHHH----HHH---Hhhcc---------------CCCcccccCC
Confidence 9999999988999999999999999999998877532110 000 00000 0011223445
Q ss_pred HHHHHHHHhccccCcCCCCCHHHHHHH
Q 002021 930 SFVFNLAMECTMEFPKQRINAKEIVTK 956 (979)
Q Consensus 930 ~~l~~l~~~cl~~dP~~Rps~~eil~~ 956 (979)
+.+.+++.+||+.||++|||+.|+++|
T Consensus 300 ~~~~~li~~~l~~~p~~Rps~~~~l~~ 326 (332)
T 3qd2_B 300 PQEHMMVQDMLSPSPTERPEATDIIEN 326 (332)
T ss_dssp HHHHHHHHHHHCSSGGGSCCHHHHHHS
T ss_pred hhHHHHHHHHccCCCCcCCCHHHHhhc
Confidence 668999999999999999999999875
No 168
>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens}
Probab=100.00 E-value=8.4e-39 Score=353.55 Aligned_cols=263 Identities=22% Similarity=0.276 Sum_probs=208.2
Q ss_pred hCCCCCCceeeeecceEEEEEEc-CCCcEEEEEEeccccccchhcHHHHHHHHHhcCCCCeeeEEEeec----cCCeeEE
Q 002021 681 TDGFSENNLIGRGGFGSVYKASL-GDGMEVAVKVFTSQCGRAFKSFDVECEIMKSIRHRNLIKVISSCS----NEEFKAL 755 (979)
Q Consensus 681 ~~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~----~~~~~~l 755 (979)
.++|+..+.||+|+||.||+|.. .+++.||||++........+.+.+|+++++.++||||+++++++. .....++
T Consensus 28 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~l 107 (317)
T 2buj_A 28 NKHYLFIQKLGEGGFSYVDLVEGLHDGHFYALKRILCHEQQDREEAQREADMHRLFNHPNILRLVAYCLRERGAKHEAWL 107 (317)
T ss_dssp TEEEEEEEEEEC--CEEEEEEEETTTCCEEEEEEEEESSHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEEEETTEEEEEE
T ss_pred CeEEEEEEEecCCCCeEEEEEEecCCCcEEEEEEEecCCHHHHHHHHHHHHHHhhcCCCCeeeEEEEEEeccCCCceeEE
Confidence 36788999999999999999954 689999999987655556678899999999999999999999986 3457899
Q ss_pred EEEecCCCccceeecc---CCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCEEeCCCCcEEEEeecccccc
Q 002021 756 VLEYMPHGSLEKYLYS---SNCILDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFSIAKML 832 (979)
Q Consensus 756 v~E~~~~g~L~~~l~~---~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~i~H~Dik~~NIll~~~~~~kl~Dfg~~~~~ 832 (979)
||||+++|+|.+++.. ....+++.+++.++.|++.||+||| +++|+||||||+||+++.++.+||+|||.+...
T Consensus 108 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH---~~~ivH~dlkp~NIl~~~~~~~kl~dfg~~~~~ 184 (317)
T 2buj_A 108 LLPFFKRGTLWNEIERLKDKGNFLTEDQILWLLLGICRGLEAIH---AKGYAHRDLKPTNILLGDEGQPVLMDLGSMNQA 184 (317)
T ss_dssp EEECCTTCBHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEECTTSCEEECCCSSCEES
T ss_pred EEEeCCCCcHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH---hCCcccCCCCHHHEEEcCCCCEEEEecCcchhc
Confidence 9999999999999875 3557999999999999999999999 899999999999999999999999999998764
Q ss_pred CCCCCc-------ceecccccCCCCCCccccCCCC---CCCchhHHHHHHHHHHHHcCCCCCcccccCcchHhHhhhhhc
Q 002021 833 TGEDQS-------MIQTQTLATIGYMAPEYGREGR---VSANGDVYSFGIMLMETFTGKKPTDEIFNGEMTLKHWVNDWL 902 (979)
Q Consensus 833 ~~~~~~-------~~~~~~~gt~~y~aPE~~~~~~---~~~~~DvwslG~il~el~tg~~P~~~~~~~~~~~~~~~~~~~ 902 (979)
...... .......||+.|+|||.+.+.. +++++||||||+++|||++|+.||..................
T Consensus 185 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~ 264 (317)
T 2buj_A 185 CIHVEGSRQALTLQDWAAQRCTISYRAPELFSVQSHCVIDERTDVWSLGCVLYAMMFGEGPYDMVFQKGDSVALAVQNQL 264 (317)
T ss_dssp CEEEESHHHHHHHHHHHHHHSCGGGCCGGGSSCCSEEEECTHHHHHHHHHHHHHHHHSSCTTHHHHHTTSCHHHHHHCC-
T ss_pred ccccccccccccccccccccCCcccCCHhHhccCCCcCCCchhhHHHHHHHHHHHHhCCCChhhhhcccchhhHHhhccC
Confidence 321111 0112345799999999987543 789999999999999999999999753322222211111100
Q ss_pred CCccchhhcccccCchhhhhHHHHHHHHHHHHHHHhccccCcCCCCCHHHHHHHHHHhHHhh
Q 002021 903 PISTMEVVDANLLSQEDIHFVAKEQCVSFVFNLAMECTMEFPKQRINAKEIVTKLLKIRDSL 964 (979)
Q Consensus 903 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~eil~~L~~~~~~~ 964 (979)
..+....++.++.+++.+||+.||.+|||+.|++++|+++....
T Consensus 265 ------------------~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~L~~~~~~~ 308 (317)
T 2buj_A 265 ------------------SIPQSPRHSSALWQLLNSMMTVDPHQRPHIPLLLSQLEALQPPA 308 (317)
T ss_dssp -------------------CCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTCCCC
T ss_pred ------------------CCCccccCCHHHHHHHHHHhhcChhhCCCHHHHHHHhhhcCCCC
Confidence 00111234567999999999999999999999999999886543
No 169
>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 4dea_A* 4deb_A* ...
Probab=100.00 E-value=7.5e-39 Score=347.01 Aligned_cols=247 Identities=26% Similarity=0.365 Sum_probs=201.3
Q ss_pred hCCCCCCceeeeecceEEEEEE-cCCCcEEEEEEecccc---ccchhcHHHHHHHHHhcCCCCeeeEEEeeccCCeeEEE
Q 002021 681 TDGFSENNLIGRGGFGSVYKAS-LGDGMEVAVKVFTSQC---GRAFKSFDVECEIMKSIRHRNLIKVISSCSNEEFKALV 756 (979)
Q Consensus 681 ~~~~~~~~~lG~G~~g~Vy~~~-~~~~~~vAvK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 756 (979)
.++|+..+.||+|+||.||+|. ..+++.||||++.... ....+.+.+|+++++.++||||+++++++.+.+..++|
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 87 (279)
T 3fdn_A 8 LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLI 87 (279)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHHTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEE
T ss_pred cccEEEeeEEecCCCeEEEEEEEccCCcEEEEEEEeccccchhhHHHHHHHHHHHHHcCCCCCCcchhheEecCCEEEEE
Confidence 4678889999999999999994 5568899999986432 22346688999999999999999999999999999999
Q ss_pred EEecCCCccceeeccCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCEEeCCCCcEEEEeeccccccCCCC
Q 002021 757 LEYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFSIAKMLTGED 836 (979)
Q Consensus 757 ~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~i~H~Dik~~NIll~~~~~~kl~Dfg~~~~~~~~~ 836 (979)
|||+++|+|.+++.... .+++..++.++.|++.|++||| +++|+||||||+||+++.++.+||+|||++.......
T Consensus 88 ~e~~~~~~l~~~l~~~~-~~~~~~~~~~~~qi~~~l~~LH---~~~i~H~dlkp~Nili~~~~~~~l~Dfg~~~~~~~~~ 163 (279)
T 3fdn_A 88 LEYAPLGTVYRELQKLS-KFDEQRTATYITELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR 163 (279)
T ss_dssp ECCCTTEEHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHH---TTTCEECCCCGGGEEECTTSCEEECSCCEESCC----
T ss_pred EecCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---hCCEecccCChHhEEEcCCCCEEEEeccccccCCccc
Confidence 99999999999987643 5899999999999999999999 9999999999999999999999999999986543221
Q ss_pred CcceecccccCCCCCCccccCCCCCCCchhHHHHHHHHHHHHcCCCCCcccccCcchHhHhhhhhcCCccchhhcccccC
Q 002021 837 QSMIQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFTGKKPTDEIFNGEMTLKHWVNDWLPISTMEVVDANLLS 916 (979)
Q Consensus 837 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 916 (979)
.....||+.|+|||.+.+..++.++||||+|+++|||++|+.||......+ ..... ...
T Consensus 164 ----~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~-~~~~~-~~~--------------- 222 (279)
T 3fdn_A 164 ----RTDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQE-TYKRI-SRV--------------- 222 (279)
T ss_dssp --------CCCCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCTTCCSSHHH-HHHHH-HHT---------------
T ss_pred ----ccccCCCCCccCHhHhccCCCCccchhHhHHHHHHHHHHCCCCCCCCcHHH-HHHHH-HhC---------------
Confidence 234578999999999998889999999999999999999999987522111 01100 000
Q ss_pred chhhhhHHHHHHHHHHHHHHHhccccCcCCCCCHHHHHHH
Q 002021 917 QEDIHFVAKEQCVSFVFNLAMECTMEFPKQRINAKEIVTK 956 (979)
Q Consensus 917 ~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~eil~~ 956 (979)
....+..++..+.+++.+||+.||++|||+.|+++|
T Consensus 223 ----~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~h 258 (279)
T 3fdn_A 223 ----EFTFPDFVTEGARDLISRLLKHNPSQRPMLREVLEH 258 (279)
T ss_dssp ----CCCCCTTSCHHHHHHHHHHCCSSGGGSCCHHHHHHC
T ss_pred ----CCCCCCcCCHHHHHHHHHHhccChhhCCCHHHHhhC
Confidence 000112345668899999999999999999999997
No 170
>2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus}
Probab=100.00 E-value=9.8e-39 Score=369.06 Aligned_cols=247 Identities=26% Similarity=0.357 Sum_probs=204.7
Q ss_pred CCCCCCceeeeecceEEEEEEc-CCCcEEEEEEecccc---ccchhcHHHHHHHHHhcCCCCeeeEEEeeccCCeeEEEE
Q 002021 682 DGFSENNLIGRGGFGSVYKASL-GDGMEVAVKVFTSQC---GRAFKSFDVECEIMKSIRHRNLIKVISSCSNEEFKALVL 757 (979)
Q Consensus 682 ~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vAvK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 757 (979)
++|...+.||+|+||.||+|.. .+|+.||||++.... ....+.+.+|+++++.++||||+++++++.+++..++||
T Consensus 16 ~~Y~l~~~LG~G~fg~V~~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~lv~ 95 (476)
T 2y94_A 16 GHYILGDTLGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFRHPHIIKLYQVISTPSDIFMVM 95 (476)
T ss_dssp TTEEEEEEEECCSSSCEEEEEETTTCCEEEEEEEEHHHHHHTTTHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred cCEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEE
Confidence 6788899999999999999954 579999999986542 223467889999999999999999999999999999999
Q ss_pred EecCCCccceeeccCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCEEeCCCCcEEEEeeccccccCCCCC
Q 002021 758 EYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFSIAKMLTGEDQ 837 (979)
Q Consensus 758 E~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~i~H~Dik~~NIll~~~~~~kl~Dfg~~~~~~~~~~ 837 (979)
||+++|+|.+++... ..+++.+++.++.||+.|++||| +++|+||||||+||+++.++.+||+|||++.......
T Consensus 96 E~~~gg~L~~~l~~~-~~l~~~~~~~i~~qi~~aL~~LH---~~givHrDLkp~NIll~~~~~vkL~DFG~a~~~~~~~- 170 (476)
T 2y94_A 96 EYVSGGELFDYICKN-GRLDEKESRRLFQQILSGVDYCH---RHMVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGE- 170 (476)
T ss_dssp ECCSSEEHHHHTTSS-SSCCHHHHHHHHHHHHHHHHHHH---TTTEECSCCSGGGEEECTTCCEEECCCSSCEECCTTC-
T ss_pred eCCCCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHH---HCCCCcccccHHHEEEecCCCeEEEeccchhhccccc-
Confidence 999999999999764 36899999999999999999999 9999999999999999999999999999998764322
Q ss_pred cceecccccCCCCCCccccCCCCC-CCchhHHHHHHHHHHHHcCCCCCcccccCcchHhHhhhhhcCCccchhhcccccC
Q 002021 838 SMIQTQTLATIGYMAPEYGREGRV-SANGDVYSFGIMLMETFTGKKPTDEIFNGEMTLKHWVNDWLPISTMEVVDANLLS 916 (979)
Q Consensus 838 ~~~~~~~~gt~~y~aPE~~~~~~~-~~~~DvwslG~il~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 916 (979)
.....+||+.|+|||++.+..+ ++++||||+||++|||++|+.||....... ......... .
T Consensus 171 --~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~-~~~~i~~~~-------------~- 233 (476)
T 2y94_A 171 --FLRTSCGSPNYAAPEVISGRLYAGPEVDIWSSGVILYALLCGTLPFDDDHVPT-LFKKICDGI-------------F- 233 (476)
T ss_dssp --CBCCCCSCSTTCCHHHHTTCCBCSHHHHHHHHHHHHHHHHHSSCSSCCSSSHH-HHHHHHTTC-------------C-
T ss_pred --cccccCCCcCeEChhhccCCCCCCCcceehhhHHHHHHHhhCCCCCCCCCHHH-HHHHHhcCC-------------c-
Confidence 2244579999999999987765 689999999999999999999997532111 111110000 0
Q ss_pred chhhhhHHHHHHHHHHHHHHHhccccCcCCCCCHHHHHHH
Q 002021 917 QEDIHFVAKEQCVSFVFNLAMECTMEFPKQRINAKEIVTK 956 (979)
Q Consensus 917 ~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~eil~~ 956 (979)
..+..+++++.+++.+||+.||++|||+.|+++|
T Consensus 234 ------~~p~~~s~~~~~Li~~~L~~dP~~Rpt~~eil~h 267 (476)
T 2y94_A 234 ------YTPQYLNPSVISLLKHMLQVDPMKRATIKDIREH 267 (476)
T ss_dssp ------CCCTTCCHHHHHHHHHHTCSSTTTSCCHHHHHTC
T ss_pred ------CCCccCCHHHHHHHHHHcCCCchhCcCHHHHHhC
Confidence 0112345668999999999999999999999986
No 171
>3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A*
Probab=100.00 E-value=1.6e-38 Score=345.34 Aligned_cols=252 Identities=21% Similarity=0.341 Sum_probs=205.0
Q ss_pred hCCCCCCceeeeecceEEEEEE-cCCCcEEEEEEecccc--ccchhcHHHHHHHHHhcCCCCeeeEEEeeccCCeeEEEE
Q 002021 681 TDGFSENNLIGRGGFGSVYKAS-LGDGMEVAVKVFTSQC--GRAFKSFDVECEIMKSIRHRNLIKVISSCSNEEFKALVL 757 (979)
Q Consensus 681 ~~~~~~~~~lG~G~~g~Vy~~~-~~~~~~vAvK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 757 (979)
.++|+..+.||+|+||.||+|. ..+++.||+|++.... ....+.+.+|++++++++||||+++++++.+++..++||
T Consensus 5 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~ 84 (284)
T 3kk8_A 5 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVF 84 (284)
T ss_dssp TTTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred hhhhhhhhhhcCcCCeEEEEEEEcCCCceEEEEEeecccCCHHHHHHHHHHHHHHHHcCCCCcCeEEEEEEcCCEEEEEE
Confidence 4778999999999999999995 4578999999986543 233467889999999999999999999999999999999
Q ss_pred EecCCCccceeeccCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCEEeCCCCc---EEEEeeccccccCC
Q 002021 758 EYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMV---AHLSDFSIAKMLTG 834 (979)
Q Consensus 758 E~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~i~H~Dik~~NIll~~~~~---~kl~Dfg~~~~~~~ 834 (979)
||+++++|.+++.... .+++..+..++.|++.|++||| +++|+||||||+||+++.++. +||+|||.+.....
T Consensus 85 e~~~~~~l~~~~~~~~-~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dikp~Nil~~~~~~~~~~kl~Dfg~~~~~~~ 160 (284)
T 3kk8_A 85 DLVTGGELFEDIVARE-FYSEADASHCIQQILESIAYCH---SNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVND 160 (284)
T ss_dssp CCCCSCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCCGGGEEESSSSTTCCEEECCCTTCEECCS
T ss_pred ecCCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---HCCcCcCCCCHHHEEEecCCCCCcEEEeeceeeEEccc
Confidence 9999999988886653 6899999999999999999999 999999999999999986655 99999999987643
Q ss_pred CCCcceecccccCCCCCCccccCCCCCCCchhHHHHHHHHHHHHcCCCCCcccccCcchHhHhhhhhcCCccchhhcccc
Q 002021 835 EDQSMIQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFTGKKPTDEIFNGEMTLKHWVNDWLPISTMEVVDANL 914 (979)
Q Consensus 835 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 914 (979)
.. ......||+.|+|||.+.+..++.++||||+|+++|+|++|+.||....... ...........
T Consensus 161 ~~---~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~-~~~~~~~~~~~----------- 225 (284)
T 3kk8_A 161 SE---AWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQHR-LYAQIKAGAYD----------- 225 (284)
T ss_dssp SC---BCCCSCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHH-HHHHHHHTCCC-----------
T ss_pred Cc---cccCCCCCcCCcCchhhcCCCCCcccchHHHHHHHHHHHHCCCCCCCCchhH-HHHHHHhcccc-----------
Confidence 22 2244578999999999999999999999999999999999999986532111 11111100000
Q ss_pred cCchhhhhHHHHHHHHHHHHHHHhccccCcCCCCCHHHHHHH
Q 002021 915 LSQEDIHFVAKEQCVSFVFNLAMECTMEFPKQRINAKEIVTK 956 (979)
Q Consensus 915 ~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~eil~~ 956 (979)
........+++++.+++.+|++.||++|||+.|+++|
T Consensus 226 -----~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~h 262 (284)
T 3kk8_A 226 -----YPSPEWDTVTPEAKSLIDSMLTVNPKKRITADQALKV 262 (284)
T ss_dssp -----CCTTTTTTSCHHHHHHHHHHSCSSTTTSCCHHHHTTS
T ss_pred -----CCchhhcccCHHHHHHHHHHcccChhhCCCHHHHhcC
Confidence 0001112345678999999999999999999999986
No 172
>3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens}
Probab=100.00 E-value=3.3e-38 Score=355.85 Aligned_cols=256 Identities=16% Similarity=0.163 Sum_probs=209.9
Q ss_pred hhCCCCCCceeeeecceEEEEEE------cCCCcEEEEEEeccccccchhcHHHHHHHHHhcC---CCCeeeEEEeeccC
Q 002021 680 ATDGFSENNLIGRGGFGSVYKAS------LGDGMEVAVKVFTSQCGRAFKSFDVECEIMKSIR---HRNLIKVISSCSNE 750 (979)
Q Consensus 680 ~~~~~~~~~~lG~G~~g~Vy~~~------~~~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~---h~niv~l~~~~~~~ 750 (979)
..+.|...+.||+|+||.||+|. ..+++.||||++... ....+..|+++++.++ |+||+++++++..+
T Consensus 63 ~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~---~~~~~~~e~~~~~~l~~~~~~~iv~~~~~~~~~ 139 (365)
T 3e7e_A 63 GSKLVYVHHLLGEGAFAQVYEATQGDLNDAKNKQKFVLKVQKPA---NPWEFYIGTQLMERLKPSMQHMFMKFYSAHLFQ 139 (365)
T ss_dssp SSSEEEEEEEEEECSSEEEEEEEC-------CCCCEEEEEESSC---CHHHHHHHHHHHHHSCGGGGGGBCCEEEEEECS
T ss_pred CCEEEEEEEEeeccCCEEEEEEEecCCcccccCcEEEEEEeCCC---ChhHHHHHHHHHHHhhhhhhhhhhhhheeeecC
Confidence 34678888999999999999993 457889999998654 3456788898888887 99999999999999
Q ss_pred CeeEEEEEecCCCccceeecc----CCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCEEeCC---------
Q 002021 751 EFKALVLEYMPHGSLEKYLYS----SNCILDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDD--------- 817 (979)
Q Consensus 751 ~~~~lv~E~~~~g~L~~~l~~----~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~i~H~Dik~~NIll~~--------- 817 (979)
+..++||||+++|+|.+++.. ....+++..++.++.|++.||+||| +++|+||||||+|||++.
T Consensus 140 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~~lH---~~~ivHrDiKp~NIll~~~~~~~~~~~ 216 (365)
T 3e7e_A 140 NGSVLVGELYSYGTLLNAINLYKNTPEKVMPQGLVISFAMRMLYMIEQVH---DCEIIHGDIKPDNFILGNGFLEQDDED 216 (365)
T ss_dssp SCEEEEECCCCSCBHHHHHHHHHTSTTCSCCHHHHHHHHHHHHHHHHHHH---TTTEECCCCSGGGEEECGGGTCC----
T ss_pred CCcEEEEeccCCCcHHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHh---hCCeecCCCCHHHEEecccccCccccc
Confidence 999999999999999999974 3456999999999999999999999 999999999999999998
Q ss_pred --CCcEEEEeeccccccCCCCCcceecccccCCCCCCccccCCCCCCCchhHHHHHHHHHHHHcCCCCCcccccCcchHh
Q 002021 818 --NMVAHLSDFSIAKMLTGEDQSMIQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFTGKKPTDEIFNGEMTLK 895 (979)
Q Consensus 818 --~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~tg~~P~~~~~~~~~~~~ 895 (979)
++.+||+|||+++.+............+||+.|+|||++.+..+++++|||||||++|||+||+.||.....+.....
T Consensus 217 ~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~ 296 (365)
T 3e7e_A 217 DLSAGLALIDLGQSIDMKLFPKGTIFTAKCETSGFQCVEMLSNKPWNYQIDYFGVAATVYCMLFGTYMKVKNEGGECKPE 296 (365)
T ss_dssp --CTTEEECCCTTCEEGGGSCTTEEECCSSCTTSCCCHHHHTTCCBSTHHHHHHHHHHHHHHHHSSCCCEEEETTEEEEC
T ss_pred cccCCEEEeeCchhhhhhccCCCceeeeecCCCCCCChHHhcCCCCCccccHHHHHHHHHHHHhCCCccccCCCCceeec
Confidence 899999999999765433334445667899999999999999999999999999999999999999865433211100
Q ss_pred HhhhhhcCCccchhhcccccCchhhhhHHHHHHHHHHHHHHHhccccCcCCC-CCHHHHHHHHHHhHHhhcc
Q 002021 896 HWVNDWLPISTMEVVDANLLSQEDIHFVAKEQCVSFVFNLAMECTMEFPKQR-INAKEIVTKLLKIRDSLLR 966 (979)
Q Consensus 896 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~R-ps~~eil~~L~~~~~~~~~ 966 (979)
. .... . .....+.+++.+|++.+|.+| |+++++.+.|+++.++...
T Consensus 297 ~-----------------~~~~----~----~~~~~~~~~~~~~l~~~p~~r~~~~~~l~~~l~~~l~~~~~ 343 (365)
T 3e7e_A 297 G-----------------LFRR----L----PHLDMWNEFFHVMLNIPDCHHLPSLDLLRQKLKKVFQQHYT 343 (365)
T ss_dssp S-----------------CCTT----C----SSHHHHHHHHHHHHCCCCTTCCCCHHHHHHHHHHHHHHHTT
T ss_pred h-----------------hccc----c----CcHHHHHHHHHHHcCCCCCCcchHHHHHHHHHHHHHHHhhh
Confidence 0 0000 0 113446789999999999998 6888999999988876443
No 173
>3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A*
Probab=100.00 E-value=2.7e-39 Score=356.24 Aligned_cols=261 Identities=23% Similarity=0.386 Sum_probs=198.4
Q ss_pred hCCCCCCceeeeecceEEEEEE-cCCCcEEEEEEeccccc---cchhcHHHHHHHHHhcCCCCeeeEEEeeccCCe----
Q 002021 681 TDGFSENNLIGRGGFGSVYKAS-LGDGMEVAVKVFTSQCG---RAFKSFDVECEIMKSIRHRNLIKVISSCSNEEF---- 752 (979)
Q Consensus 681 ~~~~~~~~~lG~G~~g~Vy~~~-~~~~~~vAvK~~~~~~~---~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~---- 752 (979)
.++|+..+.||+|+||.||+|. ..+++.||||++..... .....+.+|++++++++||||+++++++.....
T Consensus 11 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~~~ 90 (311)
T 3ork_A 11 SDRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAETPAGPL 90 (311)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECTTTTTSHHHHHHHHHHHTTCCCCCCTTBCCEEEEEEEEETTEEE
T ss_pred cCcEEEEEEEccCCCEEEEEEEECCCCceEEEEEeCccccCCHHHHHHHHHHHHHHHcCCCCCcceEEEeeeccCCCCcc
Confidence 4678999999999999999995 46899999999975432 223568899999999999999999999866543
Q ss_pred eEEEEEecCCCccceeeccCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCEEeCCCCcEEEEeecccccc
Q 002021 753 KALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFSIAKML 832 (979)
Q Consensus 753 ~~lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~i~H~Dik~~NIll~~~~~~kl~Dfg~~~~~ 832 (979)
.++||||+++++|.+++...+ .+++.+++.++.|++.||+||| +++|+||||||+||+++.++.+||+|||++...
T Consensus 91 ~~lv~e~~~g~~L~~~l~~~~-~~~~~~~~~~~~qi~~~l~~lH---~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~a~~~ 166 (311)
T 3ork_A 91 PYIVMEYVDGVTLRDIVHTEG-PMTPKRAIEVIADACQALNFSH---QNGIIHRDVKPANIMISATNAVKVMDFGIARAI 166 (311)
T ss_dssp EEEEEECCCEEEHHHHHHHHC-SCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEEETTSCEEECCCSCC---
T ss_pred cEEEEecCCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---HCCCCcCCCCHHHEEEcCCCCEEEeeccCcccc
Confidence 499999999999999987643 6899999999999999999999 999999999999999999999999999999876
Q ss_pred CCCCCc-ceecccccCCCCCCccccCCCCCCCchhHHHHHHHHHHHHcCCCCCcccccCcchHhHhhhhhcCCccchhhc
Q 002021 833 TGEDQS-MIQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFTGKKPTDEIFNGEMTLKHWVNDWLPISTMEVVD 911 (979)
Q Consensus 833 ~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 911 (979)
...... .......||+.|+|||++.+..++.++||||+|+++|||++|+.||......+..... ..
T Consensus 167 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~~~~~~~-~~------------ 233 (311)
T 3ork_A 167 ADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQH-VR------------ 233 (311)
T ss_dssp ---------------CCTTCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHH-HH------------
T ss_pred cccccccccccccCcCcccCCHHHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCChHHHHHHH-hc------------
Confidence 433222 2223456899999999999889999999999999999999999999653221111110 00
Q ss_pred ccccCchhhhhHHHHHHHHHHHHHHHhccccCcCCCCCHHHHH-HHHHHhHH
Q 002021 912 ANLLSQEDIHFVAKEQCVSFVFNLAMECTMEFPKQRINAKEIV-TKLLKIRD 962 (979)
Q Consensus 912 ~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~eil-~~L~~~~~ 962 (979)
............++.++.+++.+||+.||++||++.+++ +.+.++..
T Consensus 234 ----~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~R~~~~~~l~~~l~~~~~ 281 (311)
T 3ork_A 234 ----EDPIPPSARHEGLSADLDAVVLKALAKNPENRYQTAAEMRADLVRVHN 281 (311)
T ss_dssp ----CCCCCHHHHSTTCCHHHHHHHHHHTCSSGGGSCSSHHHHHHHHHHHHT
T ss_pred ----CCCCCcccccCCCCHHHHHHHHHHHhcCHhhChhhHHHHHHHHHHHhc
Confidence 000011112234567799999999999999999666554 55555543
No 174
>3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens}
Probab=100.00 E-value=8.6e-39 Score=354.23 Aligned_cols=268 Identities=20% Similarity=0.256 Sum_probs=199.6
Q ss_pred CCCCCCceeeeecceEEEEEEc-CCCcEEEEEEeccccc-cchhcHHHHHHHHHhcCCCCeeeEEEeeccCCeeEEEEEe
Q 002021 682 DGFSENNLIGRGGFGSVYKASL-GDGMEVAVKVFTSQCG-RAFKSFDVECEIMKSIRHRNLIKVISSCSNEEFKALVLEY 759 (979)
Q Consensus 682 ~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vAvK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~E~ 759 (979)
++|...+.||+|+||.||+|.. .+++.||||++..... .....+.+|+++++.++||||+++++++.+++..++||||
T Consensus 2 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 81 (324)
T 3mtl_A 2 ETYIKLDKLGEGTYATVYKGKSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIIHTEKSLTLVFEY 81 (324)
T ss_dssp CSEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECC------CCCCCCCHHHHSCCCCTTBCCEEEEEECSSCEEEEEEC
T ss_pred CceEEEEEEcCCCCEEEEEEEECCCCcEEEEEEEecccccccchhHHHHHHHHHhcCCCCCCeeeeEEeeCCEEEEEecc
Confidence 4688889999999999999954 5789999999865432 2233456799999999999999999999999999999999
Q ss_pred cCCCccceeeccCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCEEeCCCCcEEEEeeccccccCCCCCcc
Q 002021 760 MPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFSIAKMLTGEDQSM 839 (979)
Q Consensus 760 ~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~i~H~Dik~~NIll~~~~~~kl~Dfg~~~~~~~~~~~~ 839 (979)
++ |+|.+++......+++..+..++.|++.||+||| +++|+||||||+||+++.++.+||+|||++....... .
T Consensus 82 ~~-~~l~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH---~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~~~--~ 155 (324)
T 3mtl_A 82 LD-KDLKQYLDDCGNIINMHNVKLFLFQLLRGLAYCH---RQKVLHRDLKPQNLLINERGELKLADFGLARAKSIPT--K 155 (324)
T ss_dssp CS-EEHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHH---HTTEEESSCCGGGEEECTTCCEEECSSSEEECC-------
T ss_pred cc-cCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH---HCCccCCCcCHHHEEECCCCCEEEccCcccccccCCc--c
Confidence 97 5999998887778999999999999999999999 9999999999999999999999999999998654222 2
Q ss_pred eecccccCCCCCCccccCC-CCCCCchhHHHHHHHHHHHHcCCCCCcccccCcchHhHhhhhh---cCCccchhhccc--
Q 002021 840 IQTQTLATIGYMAPEYGRE-GRVSANGDVYSFGIMLMETFTGKKPTDEIFNGEMTLKHWVNDW---LPISTMEVVDAN-- 913 (979)
Q Consensus 840 ~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwslG~il~el~tg~~P~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~-- 913 (979)
......+|+.|+|||++.+ ..++.++||||+||++|||++|+.||......+ ......... ....+.......
T Consensus 156 ~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~-~~~~i~~~~~~~~~~~~~~~~~~~~~ 234 (324)
T 3mtl_A 156 TYDNEVVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMATGRPLFPGSTVEE-QLHFIFRILGTPTEETWPGILSNEEF 234 (324)
T ss_dssp -------CGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHH-HHHHHHHHHCCCCTTTSTTGGGCHHH
T ss_pred ccccccCcccccChhhhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHH-HHHHHHHHhCCCChHhchhhhcchhh
Confidence 2244578999999998876 568999999999999999999999997632211 111111111 011111111000
Q ss_pred ----ccC-chhhhhHHHHHHHHHHHHHHHhccccCcCCCCCHHHHHHH
Q 002021 914 ----LLS-QEDIHFVAKEQCVSFVFNLAMECTMEFPKQRINAKEIVTK 956 (979)
Q Consensus 914 ----~~~-~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~eil~~ 956 (979)
... ...........+++++.+++.+|++.||++|||+.|+++|
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h 282 (324)
T 3mtl_A 235 KTYNYPKYRAEALLSHAPRLDSDGADLLTKLLQFEGRNRISAEDAMKH 282 (324)
T ss_dssp HHTCCCCCCCCCHHHHCTTSCHHHHHHHHHHSCSSGGGSCCHHHHTTS
T ss_pred cccccccccchhhhhhcCCCCHHHHHHHHHHcCcCcccCCCHHHHhcC
Confidence 000 0000112223456778999999999999999999999985
No 175
>3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} SCOP: d.144.1.7 PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ...
Probab=100.00 E-value=6.7e-39 Score=349.14 Aligned_cols=259 Identities=25% Similarity=0.415 Sum_probs=214.2
Q ss_pred hhCCCCCCceeeeecceEEEEEEc-CCCcEEEEEEeccccccchhcHHHHHHHHHhcCCCCeeeEEEeeccCCeeEEEEE
Q 002021 680 ATDGFSENNLIGRGGFGSVYKASL-GDGMEVAVKVFTSQCGRAFKSFDVECEIMKSIRHRNLIKVISSCSNEEFKALVLE 758 (979)
Q Consensus 680 ~~~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~E 758 (979)
..++|+..+.||+|+||.||+|.. .++..||||++... ....+.+.+|++++++++||||+++++++.+++..++|||
T Consensus 11 ~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~-~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e 89 (288)
T 3kfa_A 11 ERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKED-TMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITE 89 (288)
T ss_dssp CGGGEEEEEESGGGTTCSEEEEEEGGGTEEEEEEEECSC-STHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSEEEEEE
T ss_pred cccceeEEeecCCCCceeEEEeEecCCCEEEEEEecCcC-HHHHHHHHHHHHHHHhCCCCCEeeEEEEEccCCCEEEEEE
Confidence 346788889999999999999965 45889999998654 3345778899999999999999999999999999999999
Q ss_pred ecCCCccceeeccC-CCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCEEeCCCCcEEEEeeccccccCCCCC
Q 002021 759 YMPHGSLEKYLYSS-NCILDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFSIAKMLTGEDQ 837 (979)
Q Consensus 759 ~~~~g~L~~~l~~~-~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~i~H~Dik~~NIll~~~~~~kl~Dfg~~~~~~~~~~ 837 (979)
|+++++|.+++... ...+++..++.++.|++.|++||| +++|+||||||+||+++.++.+||+|||.+.......
T Consensus 90 ~~~~~~L~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH---~~~i~H~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~~- 165 (288)
T 3kfa_A 90 FMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDT- 165 (288)
T ss_dssp CCTTEEHHHHHHHCCTTTSCHHHHHHHHHHHHHHHHHHH---HHTCCCSCCSGGGEEECGGGCEEECCCCGGGTSCSSS-
T ss_pred cCCCCcHHHHHHhcccCCccHhHHHHHHHHHHHHHHHHH---HCCccCCCCCcceEEEcCCCCEEEccCccceeccCCc-
Confidence 99999999999764 346899999999999999999999 8999999999999999999999999999998765332
Q ss_pred cceecccccCCCCCCccccCCCCCCCchhHHHHHHHHHHHHc-CCCCCcccccCcchHhHhhhhhcCCccchhhcccccC
Q 002021 838 SMIQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFT-GKKPTDEIFNGEMTLKHWVNDWLPISTMEVVDANLLS 916 (979)
Q Consensus 838 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~t-g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 916 (979)
........+|+.|+|||.+.+..++.++||||+|+++|+|++ |..||....... ....+....
T Consensus 166 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~~g~~p~~~~~~~~--~~~~~~~~~-------------- 229 (288)
T 3kfa_A 166 YTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQ--VYELLEKDY-------------- 229 (288)
T ss_dssp SEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGGG--HHHHHHTTC--------------
T ss_pred cccccCCccccCcCChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHH--HHHHHhccC--------------
Confidence 233344567889999999988899999999999999999999 999986532211 111111000
Q ss_pred chhhhhHHHHHHHHHHHHHHHhccccCcCCCCCHHHHHHHHHHhHHh
Q 002021 917 QEDIHFVAKEQCVSFVFNLAMECTMEFPKQRINAKEIVTKLLKIRDS 963 (979)
Q Consensus 917 ~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~eil~~L~~~~~~ 963 (979)
....+..+++.+.+++.+|+..||++|||+.|+++.|+++...
T Consensus 230 ----~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~~~~~l~~~~~~ 272 (288)
T 3kfa_A 230 ----RMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQE 272 (288)
T ss_dssp ----CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred ----CCCCCCCCCHHHHHHHHHHhCCChhhCcCHHHHHHHHHHHHHh
Confidence 0011134556799999999999999999999999999988764
No 176
>2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A
Probab=100.00 E-value=4.7e-39 Score=357.98 Aligned_cols=252 Identities=24% Similarity=0.337 Sum_probs=200.6
Q ss_pred hCCCCCCceeeeecceEEEEEE-cCCCcEEEEEEeccccccchhcHHHHHHHHHhc-CCCCeeeEEEeeccCCeeEEEEE
Q 002021 681 TDGFSENNLIGRGGFGSVYKAS-LGDGMEVAVKVFTSQCGRAFKSFDVECEIMKSI-RHRNLIKVISSCSNEEFKALVLE 758 (979)
Q Consensus 681 ~~~~~~~~~lG~G~~g~Vy~~~-~~~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lv~E 758 (979)
.++|+..+.||+|+||.||+|. ..+|+.||||++.... ....+|++++.++ +||||+++++++.+++..|+|||
T Consensus 21 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~----~~~~~E~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~E 96 (342)
T 2qr7_A 21 TDGYEVKEDIGVGSYSVCKRCIHKATNMEFAVKIIDKSK----RDPTEEIEILLRYGQHPNIITLKDVYDDGKYVYVVTE 96 (342)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTT----CCCHHHHHHHHHHTTSTTBCCEEEEEECSSEEEEEEC
T ss_pred cccEEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEccc----CChHHHHHHHHHhcCCCCcCeEEEEEEcCCEEEEEEe
Confidence 4568889999999999999995 4578999999996542 2346788998888 79999999999999999999999
Q ss_pred ecCCCccceeeccCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCEEeCCC----CcEEEEeeccccccCC
Q 002021 759 YMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDN----MVAHLSDFSIAKMLTG 834 (979)
Q Consensus 759 ~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~i~H~Dik~~NIll~~~----~~~kl~Dfg~~~~~~~ 834 (979)
|+++|+|.+++...+ .+++.++..++.||+.||+||| +++|+||||||+||++.++ +.+||+|||+++....
T Consensus 97 ~~~gg~L~~~i~~~~-~~~~~~~~~~~~qi~~al~~lH---~~givHrDlkp~NIl~~~~~~~~~~~kl~Dfg~a~~~~~ 172 (342)
T 2qr7_A 97 LMKGGELLDKILRQK-FFSEREASAVLFTITKTVEYLH---AQGVVHRDLKPSNILYVDESGNPESIRICDFGFAKQLRA 172 (342)
T ss_dssp CCCSCBHHHHHHTCT-TCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCCGGGEEESSSSCSGGGEEECCCTTCEECBC
T ss_pred CCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHH---HCCcEeccCCHHHEEEecCCCCcCeEEEEECCCcccCcC
Confidence 999999999987654 6899999999999999999999 9999999999999998533 3599999999987643
Q ss_pred CCCcceecccccCCCCCCccccCCCCCCCchhHHHHHHHHHHHHcCCCCCcccccCcchHhHhhhhhcCCccchhhcccc
Q 002021 835 EDQSMIQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFTGKKPTDEIFNGEMTLKHWVNDWLPISTMEVVDANL 914 (979)
Q Consensus 835 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 914 (979)
... ......||+.|+|||++.+..++.++||||+||++|||++|+.||....... ......... ...
T Consensus 173 ~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~--~~~~~~~i~---------~~~ 239 (342)
T 2qr7_A 173 ENG--LLMTPCYTANFVAPEVLERQGYDAACDIWSLGVLLYTMLTGYTPFANGPDDT--PEEILARIG---------SGK 239 (342)
T ss_dssp TTC--CBCCSSCCSSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCSSCSSTTSC--HHHHHHHHH---------HCC
T ss_pred CCC--ceeccCCCccccCHHHhcCCCCCCccCeeeHhHHHHHHhcCCCCCCCCCcCC--HHHHHHHHc---------cCC
Confidence 322 2244578999999999988789999999999999999999999997532111 111111000 000
Q ss_pred cCchhhhhHHHHHHHHHHHHHHHhccccCcCCCCCHHHHHHH
Q 002021 915 LSQEDIHFVAKEQCVSFVFNLAMECTMEFPKQRINAKEIVTK 956 (979)
Q Consensus 915 ~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~eil~~ 956 (979)
.. .....+..++.++.+++.+|+..||++|||+.|+++|
T Consensus 240 ~~---~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~~il~h 278 (342)
T 2qr7_A 240 FS---LSGGYWNSVSDTAKDLVSKMLHVDPHQRLTAALVLRH 278 (342)
T ss_dssp CC---CCSTTTTTSCHHHHHHHHHHTCSSTTTSCCHHHHTTS
T ss_pred cc---cCccccccCCHHHHHHHHHHCCCChhHCcCHHHHhcC
Confidence 00 0001123456678999999999999999999999886
No 177
>3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens}
Probab=100.00 E-value=3.3e-38 Score=347.20 Aligned_cols=269 Identities=23% Similarity=0.268 Sum_probs=202.4
Q ss_pred hhCCCCCCceeeeecceEEEEEEc-CCCcEEEEEEecccc-----ccchhcHHHHHHHHHhcC---CCCeeeEEEeeccC
Q 002021 680 ATDGFSENNLIGRGGFGSVYKASL-GDGMEVAVKVFTSQC-----GRAFKSFDVECEIMKSIR---HRNLIKVISSCSNE 750 (979)
Q Consensus 680 ~~~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vAvK~~~~~~-----~~~~~~~~~E~~~l~~l~---h~niv~l~~~~~~~ 750 (979)
..++|+..+.||+|+||.||+|.. .+++.||||++.... ......+.+|+++++.++ ||||+++++++...
T Consensus 7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~niv~~~~~~~~~ 86 (308)
T 3g33_A 7 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALLRRLEAFEHPNVVRLMDVCATS 86 (308)
T ss_dssp ---CCEEEEEECCSSSCCEEEEECTTTCCEEEEEEEEEECCCTTSSCCCHHHHHHHHHHHHHHHHCCTTBCCEEEEEEEC
T ss_pred cccceEEEEEEecCCCeEEEEEEECCCCcEEEEEEEecccccccccccchhHHHHHHHHHHHhhcCCCCeEEeeeeeecc
Confidence 357899999999999999999964 678999999986432 122346778888888775 99999999998765
Q ss_pred C-----eeEEEEEecCCCccceeeccCC-CCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCEEeCCCCcEEEE
Q 002021 751 E-----FKALVLEYMPHGSLEKYLYSSN-CILDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLS 824 (979)
Q Consensus 751 ~-----~~~lv~E~~~~g~L~~~l~~~~-~~l~~~~~~~i~~~ia~~L~~LH~~~~~~i~H~Dik~~NIll~~~~~~kl~ 824 (979)
. ..++||||++ ++|.+++.... ..+++.+++.++.|++.||+||| +++|+||||||+||+++.++.+||+
T Consensus 87 ~~~~~~~~~lv~e~~~-~~L~~~~~~~~~~~~~~~~~~~i~~qi~~al~~lH---~~~ivH~Dlkp~Nil~~~~~~~kl~ 162 (308)
T 3g33_A 87 RTDREIKVTLVFEHVD-QDLRTYLDKAPPPGLPAETIKDLMRQFLRGLDFLH---ANCIVHRDLKPENILVTSGGTVKLA 162 (308)
T ss_dssp CSSSEEEEEEEEECCC-CBHHHHHHTCCTTCSCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCTTTEEECTTSCEEEC
T ss_pred CCCCceeEEEEehhhh-cCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCCHHHEEEcCCCCEEEe
Confidence 4 5799999997 59999987654 34899999999999999999999 9999999999999999999999999
Q ss_pred eeccccccCCCCCcceecccccCCCCCCccccCCCCCCCchhHHHHHHHHHHHHcCCCCCcccccCcchHhHhhhhhc--
Q 002021 825 DFSIAKMLTGEDQSMIQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFTGKKPTDEIFNGEMTLKHWVNDWL-- 902 (979)
Q Consensus 825 Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~tg~~P~~~~~~~~~~~~~~~~~~~-- 902 (979)
|||++....... ......||+.|+|||++.+..++.++||||+||++|||++|+.||......+ ..........
T Consensus 163 Dfg~a~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~-~~~~i~~~~~~~ 238 (308)
T 3g33_A 163 DFGLARIYSYQM---ALTPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEAD-QLGKIFDLIGLP 238 (308)
T ss_dssp SCSCTTTSTTCC---CSGGGGCCCSSCCHHHHHTSCCCSTHHHHHHHHHHHHTTTSSCSCCCSSHHH-HHHHHHHHHCCC
T ss_pred eCccccccCCCc---ccCCccccccccCchHHcCCCCCchHHHHHHHHHHHHHHhCCCCCCCCCHHH-HHHHHHHHhCCC
Confidence 999998754222 2345678999999999998999999999999999999999999997532221 1111111110
Q ss_pred -CCccchhh--cccccCc--hhhhhHHHHHHHHHHHHHHHhccccCcCCCCCHHHHHHH
Q 002021 903 -PISTMEVV--DANLLSQ--EDIHFVAKEQCVSFVFNLAMECTMEFPKQRINAKEIVTK 956 (979)
Q Consensus 903 -~~~~~~~~--~~~~~~~--~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~eil~~ 956 (979)
...+.... ....... ..........++..+.+++.+|++.||++|||+.|+++|
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h 297 (308)
T 3g33_A 239 PEDDWPRDVSLPRGAFPPRGPRPVQSVVPEMEESGAQLLLEMLTFNPHKRISAFRALQH 297 (308)
T ss_dssp CTTTSCSSCSSCGGGSCCCCCCCHHHHSCSCCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred ChhhccchhhccccccCCCCCCcHHHhCccccHHHHHHHHHHhcCCCccCCCHHHHhcC
Confidence 00000000 0000000 000111223456778999999999999999999999875
No 178
>2eue_A Carbon catabolite derepressing protein kinase; kinase domain; 2.20A {Saccharomyces cerevisiae} PDB: 3fam_A 3hyh_A 3dae_A 2fh9_A 3mn3_A
Probab=100.00 E-value=8.6e-39 Score=345.75 Aligned_cols=247 Identities=22% Similarity=0.351 Sum_probs=182.0
Q ss_pred hCCCCCCceeeeecceEEEEEE-cCCCcEEEEEEecccc---ccchhcHHHHHHHHHhcCCCCeeeEEEeeccCCeeEEE
Q 002021 681 TDGFSENNLIGRGGFGSVYKAS-LGDGMEVAVKVFTSQC---GRAFKSFDVECEIMKSIRHRNLIKVISSCSNEEFKALV 756 (979)
Q Consensus 681 ~~~~~~~~~lG~G~~g~Vy~~~-~~~~~~vAvK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 756 (979)
.++|+..+.||+|+||.||+|. ..+++.||+|++.... ....+.+.+|+++++.++||||+++++++.+++..++|
T Consensus 12 ~~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 91 (275)
T 2eue_A 12 IGNYQIVKTLGEGSFAKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIKSKDEIIMV 91 (275)
T ss_dssp CCCBCCCC---------EEEEECTTTCCEEEEEEECSCC-----CHHHHHHHHHHHHHCCCTTBCCEEEEEECSSCEEEE
T ss_pred ccceEEEEEEEcCCCEEEEEEEECCCCCEEEEEEEEhhhcchHHHHHHHHHHHHHHHhCCCCCeEEEEEEEecCCeEEEE
Confidence 3679999999999999999995 4578999999986542 22345788999999999999999999999999999999
Q ss_pred EEecCCCccceeeccCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCEEeCCCCcEEEEeeccccccCCCC
Q 002021 757 LEYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFSIAKMLTGED 836 (979)
Q Consensus 757 ~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~i~H~Dik~~NIll~~~~~~kl~Dfg~~~~~~~~~ 836 (979)
|||+ ++++.+++.... .+++.+++.++.|++.|++||| +++|+||||||+||++++++.+||+|||.+.......
T Consensus 92 ~e~~-~~~l~~~~~~~~-~~~~~~~~~~~~~i~~~l~~LH---~~~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~ 166 (275)
T 2eue_A 92 IEYA-GNELFDYIVQRD-KMSEQEARRFFQQIISAVEYCH---RHKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGN 166 (275)
T ss_dssp EECC-CEEHHHHHHTSS-SCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCSGGGEEECTTSCEEECCSSCC-------
T ss_pred ehhc-CCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---HCCCeeccCChHhEEECCCCCEEEeecccceeccCcc
Confidence 9999 678888876653 6899999999999999999999 9999999999999999999999999999998654322
Q ss_pred CcceecccccCCCCCCccccCCCCC-CCchhHHHHHHHHHHHHcCCCCCcccccCcchHhHhhhhhcCCccchhhccccc
Q 002021 837 QSMIQTQTLATIGYMAPEYGREGRV-SANGDVYSFGIMLMETFTGKKPTDEIFNGEMTLKHWVNDWLPISTMEVVDANLL 915 (979)
Q Consensus 837 ~~~~~~~~~gt~~y~aPE~~~~~~~-~~~~DvwslG~il~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 915 (979)
......||+.|+|||.+.+..+ ++++||||+|+++|||++|+.||....... .........
T Consensus 167 ---~~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~-~~~~~~~~~-------------- 228 (275)
T 2eue_A 167 ---FLKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDESIPV-LFKNISNGV-------------- 228 (275)
T ss_dssp -----------CTTCCHHHHCC-----THHHHHHHHHHHHHHHHSSCSSCCSSHHH-HHHHHHHTC--------------
T ss_pred ---cccCCCCCcCcCCceeeeCCCCCCcccchHHHHHHHHHHHhCCCCCCCCCHHH-HHHHHHhCC--------------
Confidence 1234568999999999887765 789999999999999999999997532111 001000000
Q ss_pred CchhhhhHHHHHHHHHHHHHHHhccccCcCCCCCHHHHHHH
Q 002021 916 SQEDIHFVAKEQCVSFVFNLAMECTMEFPKQRINAKEIVTK 956 (979)
Q Consensus 916 ~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~eil~~ 956 (979)
...+..+++.+.+++.+|++.||++|||+.|+++|
T Consensus 229 ------~~~~~~~~~~~~~li~~~l~~dP~~Rps~~e~l~h 263 (275)
T 2eue_A 229 ------YTLPKFLSPGAAGLIKRMLIVNPLNRISIHEIMQD 263 (275)
T ss_dssp ------CCCCTTSCHHHHHHHHHHSCSSGGGSCCHHHHTTC
T ss_pred ------CCCCccCCHHHHHHHHHHhhcCHhHCCCHHHHhhC
Confidence 00112345668999999999999999999999876
No 179
>1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C
Probab=100.00 E-value=2.4e-38 Score=360.19 Aligned_cols=250 Identities=21% Similarity=0.272 Sum_probs=192.8
Q ss_pred CCCCCC-ceeeeecceEEEEEE-cCCCcEEEEEEeccccccchhcHHHHHHHHH-hcCCCCeeeEEEeecc----CCeeE
Q 002021 682 DGFSEN-NLIGRGGFGSVYKAS-LGDGMEVAVKVFTSQCGRAFKSFDVECEIMK-SIRHRNLIKVISSCSN----EEFKA 754 (979)
Q Consensus 682 ~~~~~~-~~lG~G~~g~Vy~~~-~~~~~~vAvK~~~~~~~~~~~~~~~E~~~l~-~l~h~niv~l~~~~~~----~~~~~ 754 (979)
++|... +.||+|+||.||+|. ..+|+.||||++.. ...+.+|++++. ..+||||+++++++.. .+..+
T Consensus 61 ~~y~~~~~~LG~G~~g~V~~~~~~~~~~~vAiK~~~~-----~~~~~~E~~~~~~~~~hp~iv~l~~~~~~~~~~~~~~~ 135 (400)
T 1nxk_A 61 DDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQD-----CPKARREVELHWRASQCPHIVRIVDVYENLYAGRKCLL 135 (400)
T ss_dssp GTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEC-----SHHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEEE
T ss_pred ccceeccceeeeccCeEEEEEEECCCCCEEEEEEeCc-----chhHHHHHHHHHHhcCCCCcceEeEEEeecccCCcEEE
Confidence 456655 689999999999995 45789999999853 245678888875 4589999999998865 66789
Q ss_pred EEEEecCCCccceeeccCC-CCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCEEeCC---CCcEEEEeecccc
Q 002021 755 LVLEYMPHGSLEKYLYSSN-CILDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDD---NMVAHLSDFSIAK 830 (979)
Q Consensus 755 lv~E~~~~g~L~~~l~~~~-~~l~~~~~~~i~~~ia~~L~~LH~~~~~~i~H~Dik~~NIll~~---~~~~kl~Dfg~~~ 830 (979)
+||||+++|+|.+++.... ..+++.+++.++.||+.||+||| +++|+||||||+||+++. ++.+||+|||+++
T Consensus 136 lv~E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH---~~~ivHrDlkp~Nill~~~~~~~~~kl~DFG~a~ 212 (400)
T 1nxk_A 136 IVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLH---SINIAHRDVKPENLLYTSKRPNAILKLTDFGFAK 212 (400)
T ss_dssp EEEECCCSEEHHHHHHCC---CCBHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEESSSSTTCCEEECCCTTCE
T ss_pred EEEEeCCCCcHHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHH---HCCccccCcCcceEEEecCCCCccEEEEeccccc
Confidence 9999999999999998753 46899999999999999999999 899999999999999997 7899999999998
Q ss_pred ccCCCCCcceecccccCCCCCCccccCCCCCCCchhHHHHHHHHHHHHcCCCCCcccccCcch--HhHhhhhhcCCccch
Q 002021 831 MLTGEDQSMIQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFTGKKPTDEIFNGEMT--LKHWVNDWLPISTME 908 (979)
Q Consensus 831 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~tg~~P~~~~~~~~~~--~~~~~~~~~~~~~~~ 908 (979)
...... .....+||+.|+|||++.+..++.++|||||||++|||++|+.||......... ....+...
T Consensus 213 ~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~i~~~------- 282 (400)
T 1nxk_A 213 ETTSHN---SLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMG------- 282 (400)
T ss_dssp ECC--------------CTTCCGGGSCCCCSSSHHHHHHHHHHHHHHHHSSCSCCCCTTCSSCCSHHHHHHHT-------
T ss_pred ccCCCC---ccccCCCCCCccCHhhcCCCCCCCcccHHHHHHHHHHHHhCCCCCCCCccccccHHHHHHHHcC-------
Confidence 654222 224567899999999999999999999999999999999999999764322110 11110000
Q ss_pred hhcccccCchhhhhHHHHHHHHHHHHHHHhccccCcCCCCCHHHHHHHH
Q 002021 909 VVDANLLSQEDIHFVAKEQCVSFVFNLAMECTMEFPKQRINAKEIVTKL 957 (979)
Q Consensus 909 ~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~eil~~L 957 (979)
.. .........++.++.+++.+||+.||++|||+.|+++|-
T Consensus 283 -----~~---~~~~~~~~~~s~~~~~li~~~L~~dP~~Rpt~~eil~hp 323 (400)
T 1nxk_A 283 -----QY---EFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHP 323 (400)
T ss_dssp -----CC---CCCTTTTTTSCHHHHHHHHTTSCSSGGGSCCHHHHHHSH
T ss_pred -----cc---cCCCcccccCCHHHHHHHHHHCCCChhHCcCHHHHhcCc
Confidence 00 000011234567799999999999999999999999873
No 180
>3sv0_A Casein kinase I-like; typical kinase domain fold, cytosol, transferase; 2.00A {Oryza sativa japonica group}
Probab=100.00 E-value=6.2e-38 Score=363.05 Aligned_cols=276 Identities=17% Similarity=0.176 Sum_probs=220.2
Q ss_pred hCCCCCCceeeeecceEEEEEE-cCCCcEEEEEEeccccccchhcHHHHHHHHHhcCC-CCeeeEEEeeccCCeeEEEEE
Q 002021 681 TDGFSENNLIGRGGFGSVYKAS-LGDGMEVAVKVFTSQCGRAFKSFDVECEIMKSIRH-RNLIKVISSCSNEEFKALVLE 758 (979)
Q Consensus 681 ~~~~~~~~~lG~G~~g~Vy~~~-~~~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~h-~niv~l~~~~~~~~~~~lv~E 758 (979)
.++|++.+.||+|+||.||+|. ..+++.||||++... ...+.+.+|+++++.++| +++..+..++.+.+..++|||
T Consensus 6 ~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~--~~~~~~~~E~~il~~L~~~~~i~~i~~~~~~~~~~~lvme 83 (483)
T 3sv0_A 6 GNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVK--TKHPQLLYESKIYRILQGGTGIPNVRWFGVEGDYNVLVMD 83 (483)
T ss_dssp TTTEECCCCCEECSSCEEEEEEETTTCCEEEEEEEETT--CSSCCHHHHHHHHHHTTTSTTCCCEEEEEEETTEEEEEEE
T ss_pred CCcEEEEEEEeeCCCEEEEEEEECCCCcEEEEEEeccc--cccHHHHHHHHHHHHhcCCCCCCeEEEEEeeCCEEEEEEE
Confidence 4679999999999999999996 467999999987654 234578899999999987 555566666677888999999
Q ss_pred ecCCCccceeeccCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCEEe---CCCCcEEEEeeccccccCCC
Q 002021 759 YMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLL---DDNMVAHLSDFSIAKMLTGE 835 (979)
Q Consensus 759 ~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~i~H~Dik~~NIll---~~~~~~kl~Dfg~~~~~~~~ 835 (979)
|+ +++|.+++......+++.+++.|+.||+.||+||| +++|+||||||+|||+ +.++.+||+|||+++.+...
T Consensus 84 ~~-g~sL~~ll~~~~~~l~~~~~~~i~~qi~~aL~yLH---~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~~ 159 (483)
T 3sv0_A 84 LL-GPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVH---SKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKKYRDT 159 (483)
T ss_dssp CC-CCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEECCGGGTTCEEECCCTTCEECBCT
T ss_pred CC-CCCHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHH---HCCEeecccCcceEEEecCCCCCeEEEEeCCcceeccCC
Confidence 99 89999999876668999999999999999999999 9999999999999999 58899999999999876543
Q ss_pred CCc-----ceecccccCCCCCCccccCCCCCCCchhHHHHHHHHHHHHcCCCCCcccccCcchHhHhhhhhcCCccchhh
Q 002021 836 DQS-----MIQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFTGKKPTDEIFNGEMTLKHWVNDWLPISTMEVV 910 (979)
Q Consensus 836 ~~~-----~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~ 910 (979)
... .......||+.|+|||++.+..++.++|||||||++|||++|+.||............ . .+.
T Consensus 160 ~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDvwSlGvil~elltG~~Pf~~~~~~~~~~~~--~--------~i~ 229 (483)
T 3sv0_A 160 STHQHIPYRENKNLTGTARYASVNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKY--E--------KIS 229 (483)
T ss_dssp TTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSHHHHH--H--------HHH
T ss_pred ccccccccccccccCCCccccCHHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCccccchhHHHHH--H--------HHh
Confidence 321 1123567999999999999999999999999999999999999999764332211110 0 000
Q ss_pred cccccCchhhhhHHHHHHHHHHHHHHHhccccCcCCCCCHHHHHHHHHHhHHhhccCCCCcceec
Q 002021 911 DANLLSQEDIHFVAKEQCVSFVFNLAMECTMEFPKQRINAKEIVTKLLKIRDSLLRNVGGRCVRQ 975 (979)
Q Consensus 911 ~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~eil~~L~~~~~~~~~~~~~~~~~~ 975 (979)
..... .........++.++.+++.+||+.+|++||++.+|++.|+++............+|.
T Consensus 230 ~~~~~---~~~~~l~~~~p~~l~~li~~cl~~dP~~RPs~~el~~~L~~l~~~~~~~~~~~~dW~ 291 (483)
T 3sv0_A 230 EKKVA---TSIEALCRGYPTEFASYFHYCRSLRFDDKPDYSYLKRLFRDLFIREGFQFDYVFDWT 291 (483)
T ss_dssp HHHHH---SCHHHHHTTSCHHHHHHHHHHHTCCTTCCCCHHHHHHHHHHHHHHTTCCCSSCCHHH
T ss_pred hcccc---ccHHHHhcCCcHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHHHHcCCCccCCcCch
Confidence 00000 000112234567899999999999999999999999999999988777776666664
No 181
>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A
Probab=100.00 E-value=5.1e-38 Score=360.11 Aligned_cols=253 Identities=23% Similarity=0.286 Sum_probs=194.9
Q ss_pred hhCCCCCCceeeeecceEEEEEE-cCCCcEEEEEEecccc--------ccchhcHHHHHHHHHhcCCCCeeeEEEeeccC
Q 002021 680 ATDGFSENNLIGRGGFGSVYKAS-LGDGMEVAVKVFTSQC--------GRAFKSFDVECEIMKSIRHRNLIKVISSCSNE 750 (979)
Q Consensus 680 ~~~~~~~~~~lG~G~~g~Vy~~~-~~~~~~vAvK~~~~~~--------~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~ 750 (979)
..++|...+.||+|+||.||+|. ..+++.||||++.... ......+.+|++++++++||||+++++++..
T Consensus 133 ~~~~y~~~~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~- 211 (419)
T 3i6u_A 133 LRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFDA- 211 (419)
T ss_dssp HHTTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGGTTC--------CCHHHHHHHHHHCCCTTBCCCCEEEES-
T ss_pred hhccEEEEeEEeeCCCeEEEEEEECCCCcEEEEEEEEechhcccccccchhHHHHHHHHHHHHhCCCCCEeeEEEEEec-
Confidence 45789999999999999999994 5678999999986432 1223468899999999999999999999854
Q ss_pred CeeEEEEEecCCCccceeeccCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCEEeCCCC---cEEEEeec
Q 002021 751 EFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNM---VAHLSDFS 827 (979)
Q Consensus 751 ~~~~lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~i~H~Dik~~NIll~~~~---~~kl~Dfg 827 (979)
+..++||||+++|+|.+++.... .+++.+++.++.|++.||+||| +++|+||||||+||+++.++ .+||+|||
T Consensus 212 ~~~~lv~e~~~~g~L~~~l~~~~-~~~~~~~~~i~~qi~~~l~~LH---~~~ivHrDlkp~NIll~~~~~~~~~kl~DFG 287 (419)
T 3i6u_A 212 EDYYIVLELMEGGELFDKVVGNK-RLKEATCKLYFYQMLLAVQYLH---ENGIIHRDLKPENVLLSSQEEDCLIKITDFG 287 (419)
T ss_dssp SEEEEEEECCTTCBGGGGTSSSC-CCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEESSSSSSCCEEECCSS
T ss_pred CceEEEEEcCCCCcHHHHHhccC-CCCHHHHHHHHHHHHHHHHHHH---HCCccccCCChHhEEEecCCCcceEEEeecc
Confidence 45789999999999999887654 6899999999999999999999 89999999999999997544 59999999
Q ss_pred cccccCCCCCcceecccccCCCCCCccccCC---CCCCCchhHHHHHHHHHHHHcCCCCCcccccCcchHhHhhhhhcCC
Q 002021 828 IAKMLTGEDQSMIQTQTLATIGYMAPEYGRE---GRVSANGDVYSFGIMLMETFTGKKPTDEIFNGEMTLKHWVNDWLPI 904 (979)
Q Consensus 828 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~---~~~~~~~DvwslG~il~el~tg~~P~~~~~~~~~~~~~~~~~~~~~ 904 (979)
+++..... .......||+.|+|||++.+ ..++.++||||+||++|||++|+.||.................
T Consensus 288 ~a~~~~~~---~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~~i~~~~--- 361 (419)
T 3i6u_A 288 HSKILGET---SLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGK--- 361 (419)
T ss_dssp TTTSCC--------------CTTCCTTTTC----CTTHHHHHHHHHHHHHHHHHHSSCSSCCCSSSCCHHHHHHTTC---
T ss_pred cceecCCC---ccccccCCCCCccCceeeecCCCCCCCchhhhHhHHHHHHHHHHCCCCCCCCcchHHHHHHHhcCC---
Confidence 99876422 22245679999999999853 5678899999999999999999999975332221111110000
Q ss_pred ccchhhcccccCchhhhhHHHHHHHHHHHHHHHhccccCcCCCCCHHHHHHH
Q 002021 905 STMEVVDANLLSQEDIHFVAKEQCVSFVFNLAMECTMEFPKQRINAKEIVTK 956 (979)
Q Consensus 905 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~eil~~ 956 (979)
..........++..+.+++.+|++.||++|||+.|+++|
T Consensus 362 -------------~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~e~l~h 400 (419)
T 3i6u_A 362 -------------YNFIPEVWAEVSEKALDLVKKLLVVDPKARFTTEEALRH 400 (419)
T ss_dssp -------------CCCCHHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHHS
T ss_pred -------------CCCCchhhcccCHHHHHHHHHHccCChhHCcCHHHHhCC
Confidence 000112223456779999999999999999999999986
No 182
>3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens}
Probab=100.00 E-value=7.1e-39 Score=356.07 Aligned_cols=243 Identities=24% Similarity=0.324 Sum_probs=203.4
Q ss_pred hhCCCCCCceeeeecceEEEEEE-cCCCcEEEEEEeccccc--------cchhcHHHHHHHHHhcCCCCeeeEEEeeccC
Q 002021 680 ATDGFSENNLIGRGGFGSVYKAS-LGDGMEVAVKVFTSQCG--------RAFKSFDVECEIMKSIRHRNLIKVISSCSNE 750 (979)
Q Consensus 680 ~~~~~~~~~~lG~G~~g~Vy~~~-~~~~~~vAvK~~~~~~~--------~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~ 750 (979)
..++|+..+.||+|+||.||+|. ..+++.||||++..... ...+.+.+|++++++++||||+++++++.+.
T Consensus 22 ~~~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~ 101 (335)
T 3dls_A 22 YSQKYSTMSPLGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGKVTLEIAILSRVEHANIIKVLDIFENQ 101 (335)
T ss_dssp HHHHEEEEEECSSSSSCSEEEEEETTTTEEEEEEEEESTTSCTTSEEEETTTEEEEHHHHHHTTCCCTTBCCEEEEEECS
T ss_pred cccceEEEeEEEecCCEEEEEEEECCCCcEEEEEEEehhhcccccccchHHHHHHHHHHHHHHhCCCCCEeeEEEEEeeC
Confidence 45678999999999999999995 56899999999875421 1345678899999999999999999999999
Q ss_pred CeeEEEEEecCCC-ccceeeccCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCEEeCCCCcEEEEeeccc
Q 002021 751 EFKALVLEYMPHG-SLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFSIA 829 (979)
Q Consensus 751 ~~~~lv~E~~~~g-~L~~~l~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~i~H~Dik~~NIll~~~~~~kl~Dfg~~ 829 (979)
+..++||||+.+| +|.+++.... .+++..++.++.|++.||+||| +++|+||||||+||+++.++.+||+|||++
T Consensus 102 ~~~~lv~e~~~~g~~l~~~~~~~~-~l~~~~~~~i~~qi~~~L~~LH---~~~ivH~Dlkp~NIll~~~~~~kL~Dfg~a 177 (335)
T 3dls_A 102 GFFQLVMEKHGSGLDLFAFIDRHP-RLDEPLASYIFRQLVSAVGYLR---LKDIIHRDIKDENIVIAEDFTIKLIDFGSA 177 (335)
T ss_dssp SEEEEEEECCTTSCBHHHHHHTCC-CCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECTTSCEEECCCTTC
T ss_pred CEEEEEEEeCCCCccHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---hCCeEEeccCHHHEEEcCCCcEEEeecccc
Confidence 9999999999777 9999887654 5899999999999999999999 999999999999999999999999999999
Q ss_pred cccCCCCCcceecccccCCCCCCccccCCCCC-CCchhHHHHHHHHHHHHcCCCCCcccccCcchHhHhhhhhcCCccch
Q 002021 830 KMLTGEDQSMIQTQTLATIGYMAPEYGREGRV-SANGDVYSFGIMLMETFTGKKPTDEIFNGEMTLKHWVNDWLPISTME 908 (979)
Q Consensus 830 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~~DvwslG~il~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~ 908 (979)
........ .....||+.|+|||++.+..+ ++++||||+||++|||++|+.||.......
T Consensus 178 ~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~----------------- 237 (335)
T 3dls_A 178 AYLERGKL---FYTFCGTIEYCAPEVLMGNPYRGPELEMWSLGVTLYTLVFEENPFCELEETV----------------- 237 (335)
T ss_dssp EECCTTCC---BCEECSCGGGCCHHHHTTCCBCSHHHHHHHHHHHHHHHHHSSCSCSSGGGGT-----------------
T ss_pred eECCCCCc---eeccCCCccccChhhhcCCCCCCCcccchhHHHHHHHHHhCCCchhhHHHHH-----------------
Confidence 87643322 234568999999999887776 789999999999999999999996521110
Q ss_pred hhcccccCchhhhhHHHHHHHHHHHHHHHhccccCcCCCCCHHHHHHH
Q 002021 909 VVDANLLSQEDIHFVAKEQCVSFVFNLAMECTMEFPKQRINAKEIVTK 956 (979)
Q Consensus 909 ~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~eil~~ 956 (979)
.... ..+..++.++.+++.+||+.||++|||+.|++++
T Consensus 238 --~~~~--------~~~~~~~~~l~~li~~~L~~dP~~Rps~~ell~h 275 (335)
T 3dls_A 238 --EAAI--------HPPYLVSKELMSLVSGLLQPVPERRTTLEKLVTD 275 (335)
T ss_dssp --TTCC--------CCSSCCCHHHHHHHHHHTCSSGGGSCCHHHHHHC
T ss_pred --hhcc--------CCCcccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 0000 0011245668999999999999999999999987
No 183
>3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A*
Probab=100.00 E-value=3.6e-38 Score=365.24 Aligned_cols=262 Identities=21% Similarity=0.228 Sum_probs=195.9
Q ss_pred hCCCCCCceeeeecceEEEEE-EcCCCcEEEEEEecccc--ccchhcHHHHHHHHHhcCCCCeeeEEEeeccC------C
Q 002021 681 TDGFSENNLIGRGGFGSVYKA-SLGDGMEVAVKVFTSQC--GRAFKSFDVECEIMKSIRHRNLIKVISSCSNE------E 751 (979)
Q Consensus 681 ~~~~~~~~~lG~G~~g~Vy~~-~~~~~~~vAvK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~------~ 751 (979)
.++|+..+.||+|+||.||+| ...+++.||||++.... ....+.+.+|+++++.++||||+++++++... .
T Consensus 61 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~~~~ 140 (464)
T 3ttj_A 61 LKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQ 140 (464)
T ss_dssp ETTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEESGGGSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCCSTTTCC
T ss_pred cCCeEEEEEeecCCCeEEEEEEECCCCCEEEEEEECccccChHHHHHHHHHHHHHHhCCCCCCCcEEEEEccCCccccCC
Confidence 477999999999999999999 45679999999997542 23456788999999999999999999998654 4
Q ss_pred eeEEEEEecCCCccceeeccCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCEEeCCCCcEEEEeeccccc
Q 002021 752 FKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFSIAKM 831 (979)
Q Consensus 752 ~~~lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~i~H~Dik~~NIll~~~~~~kl~Dfg~~~~ 831 (979)
..|+||||+++ ++.+.+.. .+++.++..++.|++.||+||| +++|+||||||+||+++.++.+||+|||+++.
T Consensus 141 ~~~lv~E~~~~-~l~~~~~~---~l~~~~~~~~~~qil~aL~~lH---~~~iiHrDlkp~NIll~~~~~~kl~DFG~a~~ 213 (464)
T 3ttj_A 141 DVYLVMELMDA-NLCQVIQM---ELDHERMSYLLYQMLCGIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLART 213 (464)
T ss_dssp EEEEEEECCSE-EHHHHHTS---CCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEECTTSCEEECCCCCC--
T ss_pred eEEEEEeCCCC-CHHHHHhh---cCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCChHhEEEeCCCCEEEEEEEeeee
Confidence 57999999976 56665543 4899999999999999999999 99999999999999999999999999999987
Q ss_pred cCCCCCcceecccccCCCCCCccccCCCCCCCchhHHHHHHHHHHHHcCCCCCcccccCcchHhHhhhhhc---------
Q 002021 832 LTGEDQSMIQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFTGKKPTDEIFNGEMTLKHWVNDWL--------- 902 (979)
Q Consensus 832 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~tg~~P~~~~~~~~~~~~~~~~~~~--------- 902 (979)
.... ......+||+.|+|||++.+..++.++||||+||++|||++|+.||......+ .+...+....
T Consensus 214 ~~~~---~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~pF~g~~~~~-~~~~i~~~lg~p~~~~~~~ 289 (464)
T 3ttj_A 214 AGTS---FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYID-QWNKVIEQLGTPCPEFMKK 289 (464)
T ss_dssp ---C---CCC----CCCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHH-HHHHHHHHHCSCCHHHHTT
T ss_pred cCCC---cccCCCcccccccCHHHHcCCCCCHHHHHHHHHHHHHHHHhCCCCCCCCCHHH-HHHHHHHhcCCCCHHHHHH
Confidence 5422 22345679999999999999999999999999999999999999997532111 1111111000
Q ss_pred -------------CCc---cchhhcccccCchhhhhHHHHHHHHHHHHHHHhccccCcCCCCCHHHHHHH
Q 002021 903 -------------PIS---TMEVVDANLLSQEDIHFVAKEQCVSFVFNLAMECTMEFPKQRINAKEIVTK 956 (979)
Q Consensus 903 -------------~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~eil~~ 956 (979)
... ....+....... ........++++.+++.+|++.||++|||++|+++|
T Consensus 290 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~H 356 (464)
T 3ttj_A 290 LQPTVRNYVENRPKYAGLTFPKLFPDSLFPA---DSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQH 356 (464)
T ss_dssp SCHHHHHHHTTSCCCCCCCHHHHSCGGGSCC---SSHHHHHHHHHHHHHHHHHSCSSTTTSCCHHHHHTS
T ss_pred cchhhhhHhhcccccCCCChHHhCccccccc---ccccccccCHHHHHHHHHHcCCChhhCCCHHHHhcC
Confidence 000 000000000000 001122346779999999999999999999999987
No 184
>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A*
Probab=100.00 E-value=1.5e-38 Score=360.95 Aligned_cols=251 Identities=22% Similarity=0.359 Sum_probs=197.0
Q ss_pred CCCCCCceeeeecceEEEEEEcCCCcEEEEEEecccc--ccchhcHHHHHHHHHhcC--CCCeeeEEEeeccCCeeEEEE
Q 002021 682 DGFSENNLIGRGGFGSVYKASLGDGMEVAVKVFTSQC--GRAFKSFDVECEIMKSIR--HRNLIKVISSCSNEEFKALVL 757 (979)
Q Consensus 682 ~~~~~~~~lG~G~~g~Vy~~~~~~~~~vAvK~~~~~~--~~~~~~~~~E~~~l~~l~--h~niv~l~~~~~~~~~~~lv~ 757 (979)
..|+..+.||+|+||.||+|...+++.||||++.... ....+.+.+|+++++.++ ||||+++++++..++..++||
T Consensus 56 ~~y~~~~~LG~G~fg~Vy~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~Ei~~l~~l~~~~~~iv~~~~~~~~~~~~~lv~ 135 (390)
T 2zmd_A 56 RIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVM 135 (390)
T ss_dssp EEEEEEEEEECCSSEEEEEEECTTCCEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEE
T ss_pred CceEEEEEEccCCCeEEEEEEcCCCCEEEEEEEecccccHHHHHHHHHHHHHHHHcccCCCeEEEEEEEEecCCEEEEEE
Confidence 4588899999999999999987789999999986542 234567889999999996 599999999999999999999
Q ss_pred EecCCCccceeeccCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCEEeCCCCcEEEEeeccccccCCCCC
Q 002021 758 EYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFSIAKMLTGEDQ 837 (979)
Q Consensus 758 E~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~i~H~Dik~~NIll~~~~~~kl~Dfg~~~~~~~~~~ 837 (979)
| +.+++|.+++.... .+++.+++.++.||+.||+||| +++|+||||||+||+++ ++.+||+|||+++.+.....
T Consensus 136 E-~~~~~L~~~l~~~~-~~~~~~~~~i~~qi~~aL~~lH---~~~ivHrDlkp~NIll~-~~~~kl~DFG~a~~~~~~~~ 209 (390)
T 2zmd_A 136 E-CGNIDLNSWLKKKK-SIDPWERKSYWKNMLEAVHTIH---QHGIVHSDLKPANFLIV-DGMLKLIDFGIANQMQPDTT 209 (390)
T ss_dssp E-CCSEEHHHHHHHCS-SCCHHHHHHHHHHHHHHHHHHH---TTTCCCCCCCGGGEEES-SSCEEECCCSSSCCC-----
T ss_pred e-cCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---HCCeeecCCCHHHEEEE-CCeEEEEecCccccccCCCc
Confidence 9 56789999987754 6899999999999999999999 99999999999999996 58999999999987654333
Q ss_pred cceecccccCCCCCCccccCC-----------CCCCCchhHHHHHHHHHHHHcCCCCCcccccCcchHhHhhhhhcCCcc
Q 002021 838 SMIQTQTLATIGYMAPEYGRE-----------GRVSANGDVYSFGIMLMETFTGKKPTDEIFNGEMTLKHWVNDWLPIST 906 (979)
Q Consensus 838 ~~~~~~~~gt~~y~aPE~~~~-----------~~~~~~~DvwslG~il~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~ 906 (979)
.......+||+.|+|||++.+ ..+++++|||||||++|||++|+.||.........+...+......
T Consensus 210 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~~~~~~~~~~~~~~~~~-- 287 (390)
T 2zmd_A 210 SVVKDSQVGAVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAIIDPNHEI-- 287 (390)
T ss_dssp ----CCSCCCGGGCCHHHHHCC------------CCHHHHHHHHHHHHHHHHHSSCTTTTCCCHHHHHHHHHCTTSCC--
T ss_pred cccCCCCCcCCCccChHHhhhccccccccccccCCCChhhHHHHHHHHHHHHHCCCcchhhhHHHHHHHHHhCccccC--
Confidence 333345679999999998754 3688999999999999999999999965322111111111100000
Q ss_pred chhhcccccCchhhhhHHHHHHHHHHHHHHHhccccCcCCCCCHHHHHHH
Q 002021 907 MEVVDANLLSQEDIHFVAKEQCVSFVFNLAMECTMEFPKQRINAKEIVTK 956 (979)
Q Consensus 907 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~eil~~ 956 (979)
..+...+.++.+++.+||+.||.+|||+.|+++|
T Consensus 288 ----------------~~~~~~~~~~~~li~~~L~~dP~~Rps~~ell~h 321 (390)
T 2zmd_A 288 ----------------EFPDIPEKDLQDVLKCCLKRDPKQRISIPELLAH 321 (390)
T ss_dssp ----------------CCCCCSCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred ----------------CCCccchHHHHHHHHHHcccChhhCCCHHHHhhC
Confidence 0011123568899999999999999999999986
No 185
>4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens}
Probab=100.00 E-value=3.1e-38 Score=348.04 Aligned_cols=265 Identities=21% Similarity=0.271 Sum_probs=200.0
Q ss_pred CCCCCCceeeeecceEEEEEEc-CCCcEEEEEEecccccc--chhcHHHHHHHHHhcCCCCeeeEEEeeccCCeeEEEEE
Q 002021 682 DGFSENNLIGRGGFGSVYKASL-GDGMEVAVKVFTSQCGR--AFKSFDVECEIMKSIRHRNLIKVISSCSNEEFKALVLE 758 (979)
Q Consensus 682 ~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vAvK~~~~~~~~--~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~E 758 (979)
++|+..+.||+|+||.||+|.. .+|+.||||++...... ..+.+.+|++++++++||||+++++++.+.+..++|||
T Consensus 3 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 82 (311)
T 4agu_A 3 EKYEKIGKIGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLKHPNLVNLLEVFRRKRRLHLVFE 82 (311)
T ss_dssp CCEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECCCCC-HHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred ccceEeeEEeecCCeEEEEEEeCCCCcEEEEEEeeccccchHHHHHHHHHHHHHHhCCCCCccchhheeecCCeEEEEEE
Confidence 5788899999999999999955 56999999998654322 24567889999999999999999999999999999999
Q ss_pred ecCCCccceeeccCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCEEeCCCCcEEEEeeccccccCCCCCc
Q 002021 759 YMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFSIAKMLTGEDQS 838 (979)
Q Consensus 759 ~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~i~H~Dik~~NIll~~~~~~kl~Dfg~~~~~~~~~~~ 838 (979)
|+++++|.+++... ..+++..+..++.|++.|++||| +++|+||||||+||+++.++.+||+|||.+........
T Consensus 83 ~~~~~~l~~~~~~~-~~~~~~~~~~i~~~l~~~l~~lH---~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~- 157 (311)
T 4agu_A 83 YCDHTVLHELDRYQ-RGVPEHLVKSITWQTLQAVNFCH---KHNCIHRDVKPENILITKHSVIKLCDFGFARLLTGPSD- 157 (311)
T ss_dssp CCSEEHHHHHHHTS-SCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECTTSCEEECCCTTCEECC-----
T ss_pred eCCCchHHHHHhhh-cCCCHHHHHHHHHHHHHHHHHHH---HCCCcCCCCChhhEEEcCCCCEEEeeCCCchhccCccc-
Confidence 99999998887654 36899999999999999999999 99999999999999999999999999999987643322
Q ss_pred ceecccccCCCCCCccccCC-CCCCCchhHHHHHHHHHHHHcCCCCCcccccCcchHhHhhhhhcC-----------Ccc
Q 002021 839 MIQTQTLATIGYMAPEYGRE-GRVSANGDVYSFGIMLMETFTGKKPTDEIFNGEMTLKHWVNDWLP-----------IST 906 (979)
Q Consensus 839 ~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwslG~il~el~tg~~P~~~~~~~~~~~~~~~~~~~~-----------~~~ 906 (979)
......+|+.|+|||.+.+ ..++.++||||+|+++|||++|+.||......+.. ......... ...
T Consensus 158 -~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 235 (311)
T 4agu_A 158 -YYDDEVATRWYRSPELLVGDTQYGPPVDVWAIGCVFAELLSGVPLWPGKSDVDQL-YLIRKTLGDLIPRHQQVFSTNQY 235 (311)
T ss_dssp ---------GGGCCHHHHHTCSCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHH-HHHHHHHCSCCHHHHHHHHTCGG
T ss_pred -ccCCCcCCccccChHHHhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHH-HHHHHHhcccccccccccccccc
Confidence 2244578999999998865 56899999999999999999999999764322111 110000000 000
Q ss_pred ---chhhcccccCchhhhhHHHHHHHHHHHHHHHhccccCcCCCCCHHHHHHH
Q 002021 907 ---MEVVDANLLSQEDIHFVAKEQCVSFVFNLAMECTMEFPKQRINAKEIVTK 956 (979)
Q Consensus 907 ---~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~eil~~ 956 (979)
....++.... ........++..+.+++.+||+.||++|||++|+++|
T Consensus 236 ~~~~~~~~~~~~~---~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 285 (311)
T 4agu_A 236 FSGVKIPDPEDME---PLELKFPNISYPALGLLKGCLHMDPTERLTCEQLLHH 285 (311)
T ss_dssp GTTCCCCCCSSCC---CHHHHCTTCCHHHHHHHHHHCCSSTTTSCCHHHHHTS
T ss_pred cccCcCCCccccc---hhhhhcccccHHHHHHHHHHccCChhhcCCHHHHhcC
Confidence 0000000000 0111123456779999999999999999999999976
No 186
>2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A
Probab=100.00 E-value=1.2e-38 Score=352.17 Aligned_cols=268 Identities=21% Similarity=0.265 Sum_probs=200.0
Q ss_pred CCCCCC-ceeeeecceEEEEEE-cCCCcEEEEEEeccccccchhcHHHHHHHHHhc-CCCCeeeEEEeeccCCeeEEEEE
Q 002021 682 DGFSEN-NLIGRGGFGSVYKAS-LGDGMEVAVKVFTSQCGRAFKSFDVECEIMKSI-RHRNLIKVISSCSNEEFKALVLE 758 (979)
Q Consensus 682 ~~~~~~-~~lG~G~~g~Vy~~~-~~~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lv~E 758 (979)
+.|++. +.||+|+||.||+|. ..+++.||||++........+.+.+|++++.++ +||||+++++++.+++..++|||
T Consensus 12 ~~y~i~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~~~~h~~i~~~~~~~~~~~~~~lv~e 91 (316)
T 2ac3_A 12 DVYQLQEDVLGEGAHARVQTCINLITSQEYAVKIIEKQPGHIRSRVFREVEMLYQCQGHRNVLELIEFFEEEDRFYLVFE 91 (316)
T ss_dssp TSCEECCCCCCCCSSEEEEEEECSSSCCEEEEEEEECCSSCCHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred eeEEecCceecCCceEEEEEEEEcCCCcEEEEEEEeeCcchhHHHHHHHHHHHHHhcCCCCeeeEEEEEeeCCEEEEEEE
Confidence 556663 789999999999995 457999999999766555567889999999985 79999999999999999999999
Q ss_pred ecCCCccceeeccCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCEEeCCCCc---EEEEeeccccccCCC
Q 002021 759 YMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMV---AHLSDFSIAKMLTGE 835 (979)
Q Consensus 759 ~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~i~H~Dik~~NIll~~~~~---~kl~Dfg~~~~~~~~ 835 (979)
|+++|+|.+++.... .+++.+++.++.|++.||+||| +++|+||||||+||+++.++. +||+|||++......
T Consensus 92 ~~~~~~L~~~l~~~~-~~~~~~~~~i~~qi~~~l~~lH---~~~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~~~~~~~~ 167 (316)
T 2ac3_A 92 KMRGGSILSHIHKRR-HFNELEASVVVQDVASALDFLH---NKGIAHRDLKPENILCEHPNQVSPVKICDFDLGSGIKLN 167 (316)
T ss_dssp CCTTCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEESCSSSSCSEEECCTTCCC-----
T ss_pred cCCCCcHHHHHhccC-CCCHHHHHHHHHHHHHHHHHHH---hCCceeCCCCHHHEEEccCCCcCceEEEEccCccccccC
Confidence 999999999987653 6899999999999999999999 899999999999999998776 999999998765322
Q ss_pred CC-----cceecccccCCCCCCccccCC-----CCCCCchhHHHHHHHHHHHHcCCCCCcccccCcchHhHhhhhhcCCc
Q 002021 836 DQ-----SMIQTQTLATIGYMAPEYGRE-----GRVSANGDVYSFGIMLMETFTGKKPTDEIFNGEMTLKHWVNDWLPIS 905 (979)
Q Consensus 836 ~~-----~~~~~~~~gt~~y~aPE~~~~-----~~~~~~~DvwslG~il~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~ 905 (979)
.. ........||+.|+|||++.. ..++.++||||+||++|||++|+.||......+..... ......
T Consensus 168 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~---~~~~~~ 244 (316)
T 2ac3_A 168 GDCSPISTPELLTPCGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPPFVGRCGSDCGWDR---GEACPA 244 (316)
T ss_dssp --------------CCSGGGCCHHHHHHTSHHHHHHTTTHHHHHHHHHHHHHHHSSCSCCCCCCSCSCC-------CCHH
T ss_pred CccccccccccccccCCcCccChHHhhcccccccCCCcccccHhHHHHHHHHHHCCCCCcccccccccccc---cccchh
Confidence 11 111233468999999998864 56889999999999999999999999764332211000 000000
Q ss_pred -cchhhcccccCchhhhhHHHHHHHHHHHHHHHhccccCcCCCCCHHHHHHH
Q 002021 906 -TMEVVDANLLSQEDIHFVAKEQCVSFVFNLAMECTMEFPKQRINAKEIVTK 956 (979)
Q Consensus 906 -~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~eil~~ 956 (979)
...+..................++.++.+++.+|++.||++|||+.|+++|
T Consensus 245 ~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~e~l~h 296 (316)
T 2ac3_A 245 CQNMLFESIQEGKYEFPDKDWAHISCAAKDLISKLLVRDAKQRLSAAQVLQH 296 (316)
T ss_dssp HHHHHHHHHHHCCCCCCHHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHHS
T ss_pred HHHHHHHHHhccCcccCchhcccCCHHHHHHHHHHhhCChhhCCCHHHHhcC
Confidence 000000000000000111223456779999999999999999999999986
No 187
>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7
Probab=100.00 E-value=3.5e-39 Score=380.99 Aligned_cols=262 Identities=26% Similarity=0.421 Sum_probs=213.9
Q ss_pred hCCCCCCceeeeecceEEEEEEcCCCcEEEEEEeccccccchhcHHHHHHHHHhcCCCCeeeEEEeeccCCeeEEEEEec
Q 002021 681 TDGFSENNLIGRGGFGSVYKASLGDGMEVAVKVFTSQCGRAFKSFDVECEIMKSIRHRNLIKVISSCSNEEFKALVLEYM 760 (979)
Q Consensus 681 ~~~~~~~~~lG~G~~g~Vy~~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~E~~ 760 (979)
.++|+..+.||+|+||.||+|.+.++..||||+++... ...+.|.+|+++|++++||||+++++++.+ +..++||||+
T Consensus 266 ~~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~hpniv~~~~~~~~-~~~~lv~e~~ 343 (535)
T 2h8h_A 266 RESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVTEYM 343 (535)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTEEEEEEEECTTS-SCHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCEEEECCC
T ss_pred hhhhhhheecccCCCeEEEEEEECCCceEEEEEeCCCC-CCHHHHHHHHHHHHhCCCCCEeeEEEEEee-ccceEeeehh
Confidence 45678889999999999999988888889999997543 345679999999999999999999999876 6789999999
Q ss_pred CCCccceeeccC-CCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCEEeCCCCcEEEEeeccccccCCCCCcc
Q 002021 761 PHGSLEKYLYSS-NCILDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFSIAKMLTGEDQSM 839 (979)
Q Consensus 761 ~~g~L~~~l~~~-~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~i~H~Dik~~NIll~~~~~~kl~Dfg~~~~~~~~~~~~ 839 (979)
++|+|.+++... ...+++.+++.++.||++||+||| +++|+||||||+|||+++++.+||+|||+++...... ..
T Consensus 344 ~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH---~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~-~~ 419 (535)
T 2h8h_A 344 SKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVE---RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNE-YT 419 (535)
T ss_dssp TTEEHHHHHSHHHHTTCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEECGGGCEEECCTTSTTTCCCHH-HH
T ss_pred cCCcHHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHH---hCCeeCCCCCHhhEEEcCCCcEEEcccccceecCCCc-ee
Confidence 999999999753 345899999999999999999999 9999999999999999999999999999998754221 11
Q ss_pred eecccccCCCCCCccccCCCCCCCchhHHHHHHHHHHHHc-CCCCCcccccCcchHhHhhhhhcCCccchhhcccccCch
Q 002021 840 IQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFT-GKKPTDEIFNGEMTLKHWVNDWLPISTMEVVDANLLSQE 918 (979)
Q Consensus 840 ~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~t-g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 918 (979)
......++..|+|||.+..+.++.++|||||||++|||++ |+.||......+ ....+...
T Consensus 420 ~~~~~~~~~~y~aPE~~~~~~~~~~sDvwSlGv~l~el~t~g~~P~~~~~~~~--~~~~i~~~----------------- 480 (535)
T 2h8h_A 420 ARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNRE--VLDQVERG----------------- 480 (535)
T ss_dssp TTCSTTSCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHTTTTCCSSTTCCHHH--HHHHHHTT-----------------
T ss_pred cccCCcCcccccCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHH--HHHHHHcC-----------------
Confidence 1233456788999999988899999999999999999999 999987532211 11111000
Q ss_pred hhhhHHHHHHHHHHHHHHHhccccCcCCCCCHHHHHHHHHHhHHhhccCC
Q 002021 919 DIHFVAKEQCVSFVFNLAMECTMEFPKQRINAKEIVTKLLKIRDSLLRNV 968 (979)
Q Consensus 919 ~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~eil~~L~~~~~~~~~~~ 968 (979)
.+...+..++..+.++|.+||+.||++|||+.||++.|+++..+...++
T Consensus 481 -~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~~l~~~L~~~~~~~~~~~ 529 (535)
T 2h8h_A 481 -YRMPCPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYFTSTEPQY 529 (535)
T ss_dssp -CCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTSSCCCSCSS
T ss_pred -CCCCCCCCCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHhhccCccc
Confidence 0111223566779999999999999999999999999998876655554
No 188
>1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A*
Probab=100.00 E-value=1.5e-38 Score=354.96 Aligned_cols=247 Identities=26% Similarity=0.365 Sum_probs=200.9
Q ss_pred CCCCCCceeeeecceEEEEEE-cCCCcEEEEEEeccccc---cchhcHHHHHHHHHhcCCCCeeeEEEeeccCCeeEEEE
Q 002021 682 DGFSENNLIGRGGFGSVYKAS-LGDGMEVAVKVFTSQCG---RAFKSFDVECEIMKSIRHRNLIKVISSCSNEEFKALVL 757 (979)
Q Consensus 682 ~~~~~~~~lG~G~~g~Vy~~~-~~~~~~vAvK~~~~~~~---~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 757 (979)
+.|+..+.||+|+||.||+|. ..+|+.||||++..... ...+.+.+|++++++++||||+++++++.+++..++||
T Consensus 54 ~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~ 133 (348)
T 1u5q_A 54 KLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVM 133 (348)
T ss_dssp HHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEESCSSCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEE
T ss_pred hheeeeeEEccCCCEEEEEEEEccCCeEEEEEEEccccccchHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCeEEEEE
Confidence 347788999999999999995 46899999999865422 23457889999999999999999999999999999999
Q ss_pred EecCCCccceeeccCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCEEeCCCCcEEEEeeccccccCCCCC
Q 002021 758 EYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFSIAKMLTGEDQ 837 (979)
Q Consensus 758 E~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~i~H~Dik~~NIll~~~~~~kl~Dfg~~~~~~~~~~ 837 (979)
||++ |++.+++......+++.++..++.|+++||+||| +++|+||||||+||+++.++.+||+|||++......
T Consensus 134 e~~~-g~l~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LH---~~~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~~-- 207 (348)
T 1u5q_A 134 EYCL-GSASDLLEVHKKPLQEVEIAAVTHGALQGLAYLH---SHNMIHRDVKAGNILLSEPGLVKLGDFGSASIMAPA-- 207 (348)
T ss_dssp ECCS-EEHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHH---HTTCBCCCCSGGGEEEETTTEEEECCCTTCBSSSSB--
T ss_pred ecCC-CCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH---hCCeeeCCCCHHHEEECCCCCEEEeeccCceecCCC--
Confidence 9997 6888888766667999999999999999999999 899999999999999999999999999999865322
Q ss_pred cceecccccCCCCCCccccC---CCCCCCchhHHHHHHHHHHHHcCCCCCcccccCcchHhHhhhhhcCCccchhhcccc
Q 002021 838 SMIQTQTLATIGYMAPEYGR---EGRVSANGDVYSFGIMLMETFTGKKPTDEIFNGEMTLKHWVNDWLPISTMEVVDANL 914 (979)
Q Consensus 838 ~~~~~~~~gt~~y~aPE~~~---~~~~~~~~DvwslG~il~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 914 (979)
....||+.|+|||++. ++.++.++|||||||++|||++|+.||....... ..........+.
T Consensus 208 ----~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~p~~~~~~~~-~~~~~~~~~~~~---------- 272 (348)
T 1u5q_A 208 ----NSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMS-ALYHIAQNESPA---------- 272 (348)
T ss_dssp ----CCCCSCGGGCCHHHHHTTSSCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHH-HHHHHHHSCCCC----------
T ss_pred ----CcccCCcceeCHhhhccccCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHH-HHHHHHhcCCCC----------
Confidence 2356899999999874 5678999999999999999999999986532111 111111100000
Q ss_pred cCchhhhhHHHHHHHHHHHHHHHhccccCcCCCCCHHHHHHHH
Q 002021 915 LSQEDIHFVAKEQCVSFVFNLAMECTMEFPKQRINAKEIVTKL 957 (979)
Q Consensus 915 ~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~eil~~L 957 (979)
.....++..+.+++.+||+.||++|||+.|+++|-
T Consensus 273 --------~~~~~~~~~l~~li~~~l~~dP~~Rps~~~ll~h~ 307 (348)
T 1u5q_A 273 --------LQSGHWSEYFRNFVDSCLQKIPQDRPTSEVLLKHR 307 (348)
T ss_dssp --------CCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHTTCH
T ss_pred --------CCCCCCCHHHHHHHHHHcccChhhCcCHHHHhhCh
Confidence 00123345688999999999999999999998763
No 189
>3gxj_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3hmm_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*
Probab=100.00 E-value=5.4e-40 Score=360.62 Aligned_cols=276 Identities=24% Similarity=0.327 Sum_probs=190.6
Q ss_pred CCCCCCceeeeecceEEEEEEcCCCcEEEEEEeccccccchhcHHHHHHHHHh--cCCCCeeeEEEeeccCC----eeEE
Q 002021 682 DGFSENNLIGRGGFGSVYKASLGDGMEVAVKVFTSQCGRAFKSFDVECEIMKS--IRHRNLIKVISSCSNEE----FKAL 755 (979)
Q Consensus 682 ~~~~~~~~lG~G~~g~Vy~~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~--l~h~niv~l~~~~~~~~----~~~l 755 (979)
++|+..+.||+|+||.||+|+. +++.||||++... ....+.+|.+++.. ++||||+++++++.+.. ..++
T Consensus 3 ~~y~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~---~~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~l 78 (303)
T 3gxj_A 3 RTIVLQESIGKGRFGEVWRGKW-RGEEVAVKIFSSR---EERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWL 78 (303)
T ss_dssp GGCCCCEEEEECSSSEEEEC-C-TTSCEEEEECC-T---THHHHHHHHHHHTSTTCCC-CBCCEEEEEEEECSSSEEEEE
T ss_pred ceeeehhhccCCCCeEEEEEEE-cCcceEEEEeccc---chhhHHHHHHHHHHHhccCcceeeeeeecccCCCccceeEE
Confidence 5789999999999999999987 4899999998643 33567778888887 78999999999987765 7899
Q ss_pred EEEecCCCccceeeccCCCCCCHHHHHHHHHHHHHHHHHHhcCC-----CCCeEecCCCCCCEEeCCCCcEEEEeecccc
Q 002021 756 VLEYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGY-----SAPVIHCDLKPSNVLLDDNMVAHLSDFSIAK 830 (979)
Q Consensus 756 v~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~-----~~~i~H~Dik~~NIll~~~~~~kl~Dfg~~~ 830 (979)
||||+++|+|.+++... .+++.+++.++.|++.|++|||... +++|+||||||+||+++.++.+||+|||++.
T Consensus 79 v~e~~~~g~L~~~l~~~--~~~~~~~~~~~~~i~~~l~~lH~~~~~~~~~~~ivH~Dlkp~Nil~~~~~~~kl~DFg~a~ 156 (303)
T 3gxj_A 79 VSDYHEHGSLFDYLNRY--TVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAV 156 (303)
T ss_dssp EEECCTTCCHHHHHHHC--CBCC-CHHHHC-CHHHHHC-CCCCBCSTTCBC-CCCSCCCGGGC-CCTTCCC-BCCCCC-C
T ss_pred EEeccCCCCHHHHHhcc--CcchHHHHHHHHHHHHHHHHHHHHHhhhccCCCEeeCcCCHHHeEECCCCCEEEeecCcce
Confidence 99999999999999664 5788899999999999999999322 6799999999999999999999999999997
Q ss_pred ccCCCCCcc--eecccccCCCCCCccccCCC------CCCCchhHHHHHHHHHHHHcCCCCCcccccCcchHhHhhhhhc
Q 002021 831 MLTGEDQSM--IQTQTLATIGYMAPEYGREG------RVSANGDVYSFGIMLMETFTGKKPTDEIFNGEMTLKHWVNDWL 902 (979)
Q Consensus 831 ~~~~~~~~~--~~~~~~gt~~y~aPE~~~~~------~~~~~~DvwslG~il~el~tg~~P~~~~~~~~~~~~~~~~~~~ 902 (979)
......... ......||+.|+|||++.+. .+++++|||||||++|||++|+.|+.........+........
T Consensus 157 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~~~~~~~~~~~p~~~~~~~~~ 236 (303)
T 3gxj_A 157 RHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSDP 236 (303)
T ss_dssp CEETTTTEESCC-----CCGGGCCHHHHTTCSCTTCHHHHHHHHHHC-CCCC-CTGGGBCBTTBC-CCCCTTTTTCC-CC
T ss_pred eccCCCcccccccCCCCcCccccCHhhhcCcccccccccCcchhHHHHHHHHHHHHhcCCCccccceeeccccccCCCCc
Confidence 664333221 12334799999999998765 4456899999999999999994443322111111111000000
Q ss_pred C-CccchhhcccccCchhhhhHHHHHHHHHHHHHHHhccccCcCCCCCHHHHHHHHHHhHHh
Q 002021 903 P-ISTMEVVDANLLSQEDIHFVAKEQCVSFVFNLAMECTMEFPKQRINAKEIVTKLLKIRDS 963 (979)
Q Consensus 903 ~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~eil~~L~~~~~~ 963 (979)
. ........................++..+.+++.+||+.||++|||+.|+++.|+++.++
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~~L~~l~~~ 298 (303)
T 3gxj_A 237 SVEEMRKVVCEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQLSQQ 298 (303)
T ss_dssp CCC-CHHHHTTSCCCCCCCGGGGSSHHHHHHHHHHHTTCCSSGGGSCCHHHHHHHHHC-CCC
T ss_pred cHHHHHHHHHHhhcCCCccccccchhhHHHHHHHHHHHhccCcccCCCHHHHHHHHHHhhhh
Confidence 0 000011111111111111112235677899999999999999999999999999988753
No 190
>1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A*
Probab=100.00 E-value=9e-39 Score=346.17 Aligned_cols=253 Identities=29% Similarity=0.432 Sum_probs=200.7
Q ss_pred hCCCCCCceeeeecceEEEEEEcCCCcEEEEEEeccccccchhcHHHHHHHHHhcCCCCeeeEEEeecc-CCeeEEEEEe
Q 002021 681 TDGFSENNLIGRGGFGSVYKASLGDGMEVAVKVFTSQCGRAFKSFDVECEIMKSIRHRNLIKVISSCSN-EEFKALVLEY 759 (979)
Q Consensus 681 ~~~~~~~~~lG~G~~g~Vy~~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~-~~~~~lv~E~ 759 (979)
.++|+..+.||+|+||.||+|+. +|+.||||++... ...+.+.+|++++++++||||+++++++.+ .+..++||||
T Consensus 20 ~~~y~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~--~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~lv~e~ 96 (278)
T 1byg_A 20 MKELKLLQTIGKGEFGDVMLGDY-RGNKVAVKCIKND--ATAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEY 96 (278)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEE-TTEEEEEEECCCC--C--HHHHHTHHHHTTCCCTTBCCEEEEECCC--CCEEEECC
T ss_pred hhhceEEeEEecCCCceEEEEEE-cCCEEEEEEecch--hHHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCCceEEEEec
Confidence 46788899999999999999987 5889999998754 345678899999999999999999998654 4578999999
Q ss_pred cCCCccceeeccCC-CCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCEEeCCCCcEEEEeeccccccCCCCCc
Q 002021 760 MPHGSLEKYLYSSN-CILDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFSIAKMLTGEDQS 838 (979)
Q Consensus 760 ~~~g~L~~~l~~~~-~~l~~~~~~~i~~~ia~~L~~LH~~~~~~i~H~Dik~~NIll~~~~~~kl~Dfg~~~~~~~~~~~ 838 (979)
+++++|.+++.... ..+++..++.++.|++.|++||| +++|+||||||+||+++.++.+||+|||++.......
T Consensus 97 ~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~~~-- 171 (278)
T 1byg_A 97 MAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLE---GNNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQ-- 171 (278)
T ss_dssp CTTEEHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEECTTSCEEECCCCC----------
T ss_pred CCCCCHHHHHHhcccccCCHHHHHHHHHHHHHHHHHHH---hCCccccCCCcceEEEeCCCcEEEeeccccccccccc--
Confidence 99999999987653 23789999999999999999999 9999999999999999999999999999997653221
Q ss_pred ceecccccCCCCCCccccCCCCCCCchhHHHHHHHHHHHHc-CCCCCcccccCcchHhHhhhhhcCCccchhhcccccCc
Q 002021 839 MIQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFT-GKKPTDEIFNGEMTLKHWVNDWLPISTMEVVDANLLSQ 917 (979)
Q Consensus 839 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~t-g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 917 (979)
....+++.|+|||.+.+..+++++||||+|+++|||++ |+.||......+ ....+....
T Consensus 172 ---~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~~~--~~~~~~~~~--------------- 231 (278)
T 1byg_A 172 ---DTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKD--VVPRVEKGY--------------- 231 (278)
T ss_dssp -------CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSCGGG--HHHHHTTTC---------------
T ss_pred ---cCCCccccccCHHHhCCCCCCchhcHHHHHHHHHHHHhCCCCCCCCCCHHH--HHHHHhcCC---------------
Confidence 23457889999999988889999999999999999998 999987532211 111110000
Q ss_pred hhhhhHHHHHHHHHHHHHHHhccccCcCCCCCHHHHHHHHHHhHHhh
Q 002021 918 EDIHFVAKEQCVSFVFNLAMECTMEFPKQRINAKEIVTKLLKIRDSL 964 (979)
Q Consensus 918 ~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~eil~~L~~~~~~~ 964 (979)
....+..+++.+.+++.+||+.||++|||+.|+++.|+++....
T Consensus 232 ---~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~L~~i~~~~ 275 (278)
T 1byg_A 232 ---KMDAPDGCPPAVYEVMKNCWHLDAAMRPSFLQLREQLEHIKTHE 275 (278)
T ss_dssp ---CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHC
T ss_pred ---CCCCcccCCHHHHHHHHHHhcCChhhCCCHHHHHHHHHHHHhhh
Confidence 00112245667999999999999999999999999999998753
No 191
>3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A*
Probab=100.00 E-value=4.1e-38 Score=362.60 Aligned_cols=271 Identities=20% Similarity=0.249 Sum_probs=199.3
Q ss_pred hCCCCCCceeeeecceEEEEEE-cCCCcEEEEEEeccccc--cchhcHHHHHHHHHhcCCCCeeeEEEeeccC-----Ce
Q 002021 681 TDGFSENNLIGRGGFGSVYKAS-LGDGMEVAVKVFTSQCG--RAFKSFDVECEIMKSIRHRNLIKVISSCSNE-----EF 752 (979)
Q Consensus 681 ~~~~~~~~~lG~G~~g~Vy~~~-~~~~~~vAvK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~-----~~ 752 (979)
.++|+..+.||+|+||.||+|. ..+++.||||++..... ...+.+.+|+++++.++||||+++++++... ..
T Consensus 25 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~~ 104 (432)
T 3n9x_A 25 PDNYIIKHLIGRGSYGYVYLAYDKNTEKNVAIKKVNRMFEDLIDCKRILREITILNRLKSDYIIRLYDLIIPDDLLKFDE 104 (432)
T ss_dssp CTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECSTTTSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCTTTCCC
T ss_pred cCCEEEEEEEeecCCEEEEEEEECCCCcEEEEEEeCchhcChHHHHHHHHHHHHHHHcCCCCcceEEEEEecCCCCcCCe
Confidence 4689999999999999999995 56789999999965422 2346788999999999999999999998765 57
Q ss_pred eEEEEEecCCCccceeeccCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCEEeCCCCcEEEEeecccccc
Q 002021 753 KALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFSIAKML 832 (979)
Q Consensus 753 ~~lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~i~H~Dik~~NIll~~~~~~kl~Dfg~~~~~ 832 (979)
.|+||||++ |+|.+++... ..+++.+++.++.||++||+||| +++|+||||||+||+++.++.+||+|||+++..
T Consensus 105 ~~lv~e~~~-~~L~~~~~~~-~~l~~~~~~~i~~qil~aL~~LH---~~givHrDlkp~NILl~~~~~~kL~DFGla~~~ 179 (432)
T 3n9x_A 105 LYIVLEIAD-SDLKKLFKTP-IFLTEEHIKTILYNLLLGENFIH---ESGIIHRDLKPANCLLNQDCSVKVCDFGLARTI 179 (432)
T ss_dssp EEEEEECCS-EEHHHHHHSS-CCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEECTTCCEEECCCTTCEEC
T ss_pred EEEEEecCC-cCHHHHHhcc-CCCCHHHHHHHHHHHHHHHHHHH---HCCCCCCCCCHHHeEECCCCCEEEccCCCcccc
Confidence 899999996 5999988764 46899999999999999999999 999999999999999999999999999999876
Q ss_pred CCCCCc--------------------ceecccccCCCCCCcccc-CCCCCCCchhHHHHHHHHHHHHcCCCCCcccccCc
Q 002021 833 TGEDQS--------------------MIQTQTLATIGYMAPEYG-REGRVSANGDVYSFGIMLMETFTGKKPTDEIFNGE 891 (979)
Q Consensus 833 ~~~~~~--------------------~~~~~~~gt~~y~aPE~~-~~~~~~~~~DvwslG~il~el~tg~~P~~~~~~~~ 891 (979)
...... ......+||+.|+|||++ ....++.++||||+||++|||++|..||.....+.
T Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~DiwSlG~il~ell~g~~p~~~~~~~~ 259 (432)
T 3n9x_A 180 NSEKDTNIVNDLEENEEPGPHNKNLKKQLTSHVVTRWYRAPELILLQENYTKSIDIWSTGCIFAELLNMLQSHINDPTNR 259 (432)
T ss_dssp -------------------------------CCCCCTTCCHHHHTTCSCCCTHHHHHHHHHHHHHHHTTCTTTCSSGGGC
T ss_pred cccccccccccccccccccccccchhccccCCCCCccccCHHHHhcCCCCCcccccchHHHHHHHHHhcccccccccccc
Confidence 433211 123556799999999985 55679999999999999999999776665322111
Q ss_pred chH-----------------------hH---hhhhhcCCccch------------hhcccccCchhhhhHHHHHHHHHHH
Q 002021 892 MTL-----------------------KH---WVNDWLPISTME------------VVDANLLSQEDIHFVAKEQCVSFVF 933 (979)
Q Consensus 892 ~~~-----------------------~~---~~~~~~~~~~~~------------~~~~~~~~~~~~~~~~~~~~~~~l~ 933 (979)
... .. .+.........+ ...................+++++.
T Consensus 260 ~p~f~g~~~~~~~~~~~~~~~~~~~~~~ql~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~ 339 (432)
T 3n9x_A 260 FPLFPGSSCFPLSPDRNSKKVHEKSNRDQLNIIFNIIGTPTEDDLKNINKPEVIKYIKLFPHRKPINLKQKYPSISDDGI 339 (432)
T ss_dssp CCSCCCSCSCC----------CHHHHHHHHHHHHHHHCSCCHHHHHTCCCHHHHHHHHTSCCCCCCCHHHHSTTSCHHHH
T ss_pred cccCCCccccccCcccccccccccchHHHHHHHHHhcCCCCHHHHHhccCHHHHHHHHhCCCCCCCCHHHHCCCCCHHHH
Confidence 000 00 000000000000 0000000000000111134567899
Q ss_pred HHHHhccccCcCCCCCHHHHHHH
Q 002021 934 NLAMECTMEFPKQRINAKEIVTK 956 (979)
Q Consensus 934 ~l~~~cl~~dP~~Rps~~eil~~ 956 (979)
+++.+||+.||++|||++|+++|
T Consensus 340 dLl~~mL~~dP~~R~ta~e~L~H 362 (432)
T 3n9x_A 340 NLLESMLKFNPNKRITIDQALDH 362 (432)
T ss_dssp HHHHHHSCSSTTTSCCHHHHHTC
T ss_pred HHHHHHhcCCcccCCCHHHHhcC
Confidence 99999999999999999999986
No 192
>1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A*
Probab=100.00 E-value=1.6e-38 Score=352.89 Aligned_cols=261 Identities=28% Similarity=0.455 Sum_probs=208.0
Q ss_pred CCCCCCceeeeecceEEEEEEc-CCCcEE--EEEEecccc-ccchhcHHHHHHHHHhc-CCCCeeeEEEeeccCCeeEEE
Q 002021 682 DGFSENNLIGRGGFGSVYKASL-GDGMEV--AVKVFTSQC-GRAFKSFDVECEIMKSI-RHRNLIKVISSCSNEEFKALV 756 (979)
Q Consensus 682 ~~~~~~~~lG~G~~g~Vy~~~~-~~~~~v--AvK~~~~~~-~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lv 756 (979)
++|+..+.||+|+||.||+|.. .++..+ |||++.... ....+.+.+|+++++++ +||||+++++++.+.+..++|
T Consensus 25 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~lv 104 (327)
T 1fvr_A 25 NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLA 104 (327)
T ss_dssp GGCEEEEEEECGGGCEEEEEEEEETTEEEEEEEEEEECC------CHHHHHHHHHTTCCCCTTBCCEEEEEEETTEEEEE
T ss_pred HHccceeeeecCCCceEEEEEEccCCcccceeeeeeccccchHHHHHHHHHHHHHHhccCCCchhhhceeeeeCCceEEE
Confidence 5788899999999999999954 456654 999886532 33456789999999999 899999999999999999999
Q ss_pred EEecCCCccceeeccCC---------------CCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCEEeCCCCcE
Q 002021 757 LEYMPHGSLEKYLYSSN---------------CILDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVA 821 (979)
Q Consensus 757 ~E~~~~g~L~~~l~~~~---------------~~l~~~~~~~i~~~ia~~L~~LH~~~~~~i~H~Dik~~NIll~~~~~~ 821 (979)
|||+++|+|.+++.... ..+++.+++.++.|++.||+||| +++|+||||||+||+++.++.+
T Consensus 105 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH---~~~ivH~dlkp~NIl~~~~~~~ 181 (327)
T 1fvr_A 105 IEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLS---QKQFIHRDLAARNILVGENYVA 181 (327)
T ss_dssp ECCCTTCBHHHHHHTTCHHHHCHHHHHHTTBSCSSCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECGGGCE
T ss_pred EecCCCCCHHHHHHhcccccccccccccccccccCCHHHHHHHHHHHHHHHHHHH---hCCccCCCCccceEEEcCCCeE
Confidence 99999999999997653 46899999999999999999999 9999999999999999999999
Q ss_pred EEEeeccccccCCCCCcceecccccCCCCCCccccCCCCCCCchhHHHHHHHHHHHHc-CCCCCcccccCcchHhHhhhh
Q 002021 822 HLSDFSIAKMLTGEDQSMIQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFT-GKKPTDEIFNGEMTLKHWVND 900 (979)
Q Consensus 822 kl~Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~t-g~~P~~~~~~~~~~~~~~~~~ 900 (979)
||+|||+++.... ........+++.|+|||.+.+..++.++||||+|+++|||++ |+.||......+ ....+..
T Consensus 182 kL~Dfg~~~~~~~---~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~pf~~~~~~~--~~~~~~~ 256 (327)
T 1fvr_A 182 KIADFGLSRGQEV---YVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAE--LYEKLPQ 256 (327)
T ss_dssp EECCTTCEESSCE---ECCC----CCTTTCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCHHH--HHHHGGG
T ss_pred EEcccCcCccccc---cccccCCCCCccccChhhhccccCCchhcchHHHHHHHHHHcCCCCCCCCCcHHH--HHHHhhc
Confidence 9999999974321 112233457889999999988889999999999999999998 999986532111 1110000
Q ss_pred hcCCccchhhcccccCchhhhhHHHHHHHHHHHHHHHhccccCcCCCCCHHHHHHHHHHhHHhhccCC
Q 002021 901 WLPISTMEVVDANLLSQEDIHFVAKEQCVSFVFNLAMECTMEFPKQRINAKEIVTKLLKIRDSLLRNV 968 (979)
Q Consensus 901 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~eil~~L~~~~~~~~~~~ 968 (979)
.. ....+..++..+.+++.+||..||++|||+.|++++|.++.+......
T Consensus 257 ~~------------------~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~~~~~~~ 306 (327)
T 1fvr_A 257 GY------------------RLEKPLNCDDEVYDLMRQCWREKPYERPSFAQILVSLNRMLEERKTYV 306 (327)
T ss_dssp TC------------------CCCCCTTBCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHSSSCSB
T ss_pred CC------------------CCCCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHhhcCcc
Confidence 00 001112345678999999999999999999999999999998665443
No 193
>2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A*
Probab=100.00 E-value=3.2e-38 Score=369.09 Aligned_cols=251 Identities=23% Similarity=0.346 Sum_probs=207.0
Q ss_pred hCCCCCCceeeeecceEEEEEEc-CCCcEEEEEEecccc---ccchhcHHHHHHHHHhcCCCCeeeEEEeeccCCeeEEE
Q 002021 681 TDGFSENNLIGRGGFGSVYKASL-GDGMEVAVKVFTSQC---GRAFKSFDVECEIMKSIRHRNLIKVISSCSNEEFKALV 756 (979)
Q Consensus 681 ~~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vAvK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 756 (979)
.++|+..+.||+|+||.||+|.. .+|+.||||++.... ....+.+.+|+++++.++||||+++++++.+.+..++|
T Consensus 183 ~~~f~~~~~LG~G~fG~Vy~a~~~~tg~~vAvK~l~k~~~~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~~~~~l~lV 262 (576)
T 2acx_A 183 KNTFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAYAYETKDALCLV 262 (576)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEE
T ss_pred ccceEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEhHhhhhhHHHHHHHHHHHHHHHcCCCCEeeEEEEEeeCCEEEEE
Confidence 35688889999999999999954 579999999986532 23345678899999999999999999999999999999
Q ss_pred EEecCCCccceeeccCC-CCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCEEeCCCCcEEEEeeccccccCCC
Q 002021 757 LEYMPHGSLEKYLYSSN-CILDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFSIAKMLTGE 835 (979)
Q Consensus 757 ~E~~~~g~L~~~l~~~~-~~l~~~~~~~i~~~ia~~L~~LH~~~~~~i~H~Dik~~NIll~~~~~~kl~Dfg~~~~~~~~ 835 (979)
|||++||+|.+++.... ..+++..++.++.||+.||+||| +++|+||||||+||+++.++.+||+|||+++.....
T Consensus 263 mEy~~gg~L~~~l~~~~~~~l~e~~~~~i~~qIl~aL~yLH---~~gIvHrDLKPeNILld~~g~vKL~DFGla~~~~~~ 339 (576)
T 2acx_A 263 LTLMNGGDLKFHIYHMGQAGFPEARAVFYAAEICCGLEDLH---RERIVYRDLKPENILLDDHGHIRISDLGLAVHVPEG 339 (576)
T ss_dssp ECCCCSCBHHHHHHSSSSCCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEECTTSCEEECCCTTCEECCTT
T ss_pred EEcCCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHH---HCCEeccCCchheEEEeCCCCeEEEecccceecccC
Confidence 99999999999987653 35899999999999999999999 999999999999999999999999999999876432
Q ss_pred CCcceecccccCCCCCCccccCCCCCCCchhHHHHHHHHHHHHcCCCCCcccccCcc--hHhHhhhhhcCCccchhhccc
Q 002021 836 DQSMIQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFTGKKPTDEIFNGEM--TLKHWVNDWLPISTMEVVDAN 913 (979)
Q Consensus 836 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~tg~~P~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~ 913 (979)
. .....+||+.|+|||++.+..++.++||||+||++|||++|+.||........ .+...+.... .
T Consensus 340 ~---~~~~~~GT~~Y~APEvl~~~~~~~~~DiwSLGvilyeLltG~~PF~~~~~~~~~~~i~~~i~~~~-~--------- 406 (576)
T 2acx_A 340 Q---TIKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIKREEVERLVKEVP-E--------- 406 (576)
T ss_dssp C---CEECCCSCGGGCCHHHHTTCEESSHHHHHHHHHHHHHHHHSSCSSSCSSSCCCHHHHHHHHHHCC-C---------
T ss_pred c---cccccCCCccccCHHHHcCCCCCccchHHHHHHHHHHHHhCCCCCcccccchhHHHHHHHhhccc-c---------
Confidence 2 22345799999999999988999999999999999999999999976432211 1111111000 0
Q ss_pred ccCchhhhhHHHHHHHHHHHHHHHhccccCcCCCC-----CHHHHHHH
Q 002021 914 LLSQEDIHFVAKEQCVSFVFNLAMECTMEFPKQRI-----NAKEIVTK 956 (979)
Q Consensus 914 ~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rp-----s~~eil~~ 956 (979)
..+..+++++.+++.+|++.||++|| +++|+++|
T Consensus 407 ---------~~p~~~s~~~~dLI~~lL~~dP~~R~g~~~~sa~eil~H 445 (576)
T 2acx_A 407 ---------EYSERFSPQARSLCSQLLCKDPAERLGCRGGSAREVKEH 445 (576)
T ss_dssp ---------CCCTTSCHHHHHHHHHHTCSSGGGSTTCSSSHHHHHHTS
T ss_pred ---------cCCccCCHHHHHHHHHhccCCHHHcCCCCCCCHHHHHhC
Confidence 01123456789999999999999999 78999876
No 194
>2v62_A Serine/threonine-protein kinase VRK2; transferase, ATP-binding, membrane, nucleotide-binding, TRAN; 1.7A {Homo sapiens}
Probab=100.00 E-value=1.5e-38 Score=355.64 Aligned_cols=266 Identities=18% Similarity=0.190 Sum_probs=201.7
Q ss_pred CCCCCCceeeeecceEEEEEEcC----CCcEEEEEEecccccc-----------chhcHHHHHHHHHhcCCCCeeeEEEe
Q 002021 682 DGFSENNLIGRGGFGSVYKASLG----DGMEVAVKVFTSQCGR-----------AFKSFDVECEIMKSIRHRNLIKVISS 746 (979)
Q Consensus 682 ~~~~~~~~lG~G~~g~Vy~~~~~----~~~~vAvK~~~~~~~~-----------~~~~~~~E~~~l~~l~h~niv~l~~~ 746 (979)
++|+..+.||+|+||.||+|... ++..||||++...... ..+.+.+|+..++.++||||++++++
T Consensus 37 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~ni~~~~~~ 116 (345)
T 2v62_A 37 NQWVLGKKIGSGGFGLIYLAFPTNKPEKDARHVVKVEYQENGPLFSELKFYQRVAKKDCIKKWIERKQLDYLGIPLFYGS 116 (345)
T ss_dssp CEEEEEEEC------CEEEEEESSSCGGGCCEEEEEEECC-CHHHHHHHHHHHHCCHHHHHHHHHHHTCSCCCCCCEEEE
T ss_pred ceEEEEeeEeecCCeEEEEEEecCCCCccceEEEEeeecCCcchHHHHHHHHHHhhhHHHHHHHhhccccccCcceeecc
Confidence 57889999999999999999654 5788999998654321 12346678888999999999999999
Q ss_pred ecc----CCeeEEEEEecCCCccceeeccCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCEEeCCCC--c
Q 002021 747 CSN----EEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNM--V 820 (979)
Q Consensus 747 ~~~----~~~~~lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~i~H~Dik~~NIll~~~~--~ 820 (979)
+.+ ....++||||+ +++|.+++...+ .+++.+++.++.|++.||+||| +++|+||||||+||+++.++ .
T Consensus 117 ~~~~~~~~~~~~lv~e~~-~~~L~~~l~~~~-~~~~~~~~~i~~qi~~aL~~LH---~~~ivH~Dlkp~NIll~~~~~~~ 191 (345)
T 2v62_A 117 GLTEFKGRSYRFMVMERL-GIDLQKISGQNG-TFKKSTVLQLGIRMLDVLEYIH---ENEYVHGDIKAANLLLGYKNPDQ 191 (345)
T ss_dssp EEEESSSCEEEEEEEECE-EEEHHHHCBGGG-BCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEEESSSTTS
T ss_pred cccccCCCcEEEEEEecc-CCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---hCCeeCCCcCHHHEEEccCCCCc
Confidence 877 77899999999 999999998765 7999999999999999999999 89999999999999999887 9
Q ss_pred EEEEeeccccccCCCCCc-----ceecccccCCCCCCccccCCCCCCCchhHHHHHHHHHHHHcCCCCCcccccCcchHh
Q 002021 821 AHLSDFSIAKMLTGEDQS-----MIQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFTGKKPTDEIFNGEMTLK 895 (979)
Q Consensus 821 ~kl~Dfg~~~~~~~~~~~-----~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~tg~~P~~~~~~~~~~~~ 895 (979)
+||+|||+++.+...... .......||+.|+|||++.+..++.++|||||||++|||++|+.||...........
T Consensus 192 ~kL~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~~~~~~~ 271 (345)
T 2v62_A 192 VYLADYGLSYRYCPNGNHKQYQENPRKGHNGTIEFTSLDAHKGVALSRRSDVEILGYCMLRWLCGKLPWEQNLKDPVAVQ 271 (345)
T ss_dssp EEECCCTTCEESSGGGCCCCCCCCGGGCSCSCTTTCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCTTGGGTTCHHHHH
T ss_pred EEEEeCCCceecccccccccchhccccccCCCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCccccccccHHHH
Confidence 999999999876432211 112445789999999999988899999999999999999999999965333222221
Q ss_pred HhhhhhcCCccchhhcccccCchhhhhHHHHHHHHHHHHHHHhccccCcCCCCCHHHHHHHHHHhHH
Q 002021 896 HWVNDWLPISTMEVVDANLLSQEDIHFVAKEQCVSFVFNLAMECTMEFPKQRINAKEIVTKLLKIRD 962 (979)
Q Consensus 896 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~eil~~L~~~~~ 962 (979)
............. . ........++.++.+++.+||+.||++||++.|+++.|+++.-
T Consensus 272 ~~~~~~~~~~~~~-~---------~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~~~~ 328 (345)
T 2v62_A 272 TAKTNLLDELPQS-V---------LKWAPSGSSCCEIAQFLVCAHSLAYDEKPNYQALKKILNPHGI 328 (345)
T ss_dssp HHHHHHHHTTTHH-H---------HHHSCTTSCCHHHHHHHHHHHTCCTTCCCCHHHHHHHHCTTCC
T ss_pred HHHHhhcccccHH-H---------HhhccccccHHHHHHHHHHHhhcCcccCCCHHHHHHHHhccCC
Confidence 1111110000000 0 0000011456689999999999999999999999999987653
No 195
>2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A*
Probab=100.00 E-value=9.7e-39 Score=354.57 Aligned_cols=260 Identities=24% Similarity=0.400 Sum_probs=206.4
Q ss_pred hCCCCCCceeeeecceEEEEEEc------CCCcEEEEEEecccc-ccchhcHHHHHHHHHhcCCCCeeeEEEeeccCCee
Q 002021 681 TDGFSENNLIGRGGFGSVYKASL------GDGMEVAVKVFTSQC-GRAFKSFDVECEIMKSIRHRNLIKVISSCSNEEFK 753 (979)
Q Consensus 681 ~~~~~~~~~lG~G~~g~Vy~~~~------~~~~~vAvK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~ 753 (979)
.++|+..+.||+|+||.||+|.. .+++.||||++.... ......+.+|+.++++++||||+++++++.+.+..
T Consensus 29 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~ 108 (327)
T 2yfx_A 29 RKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPR 108 (327)
T ss_dssp GGGCEEEEECC--CSSCEEEEEC--------CCEEEEEECCSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSC
T ss_pred hhheEEEEEEcCCCCeeEEEEEEcCCCCCCccceEEEEEeccccchhhHHHHHHHHHHHhhCCCCCCCeEEEEEcCCCCc
Confidence 46789999999999999999974 357789999986442 23456788999999999999999999999999999
Q ss_pred EEEEEecCCCccceeeccCC------CCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCEEeCC---CCcEEEE
Q 002021 754 ALVLEYMPHGSLEKYLYSSN------CILDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDD---NMVAHLS 824 (979)
Q Consensus 754 ~lv~E~~~~g~L~~~l~~~~------~~l~~~~~~~i~~~ia~~L~~LH~~~~~~i~H~Dik~~NIll~~---~~~~kl~ 824 (979)
++||||+++++|.+++.... ..+++.+++.++.|++.||+||| +++|+||||||+||+++. +..+||+
T Consensus 109 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH---~~~i~H~dlkp~NIli~~~~~~~~~kl~ 185 (327)
T 2yfx_A 109 FILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE---ENHFIHRDIAARNCLLTCPGPGRVAKIG 185 (327)
T ss_dssp EEEEECCTTEEHHHHHHHTSCCSSSTTSCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEESCSSTTCCEEEC
T ss_pred EEEEecCCCCcHHHHHHhhcccccccccccHHHHHHHHHHHHHHHHHHh---hCCeecCcCCHhHEEEecCCCcceEEEC
Confidence 99999999999999997653 45899999999999999999999 999999999999999994 4469999
Q ss_pred eeccccccCCCCCcceecccccCCCCCCccccCCCCCCCchhHHHHHHHHHHHHc-CCCCCcccccCcchHhHhhhhhcC
Q 002021 825 DFSIAKMLTGEDQSMIQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFT-GKKPTDEIFNGEMTLKHWVNDWLP 903 (979)
Q Consensus 825 Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~t-g~~P~~~~~~~~~~~~~~~~~~~~ 903 (979)
|||++................+|+.|+|||.+.+..++.++||||||+++|||+| |+.||...... .....+.....
T Consensus 186 Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~--~~~~~~~~~~~ 263 (327)
T 2yfx_A 186 DFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQ--EVLEFVTSGGR 263 (327)
T ss_dssp CCHHHHHHHC------CCGGGSCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHH--HHHHHHHTTCC
T ss_pred ccccccccccccccccCCCcCCCcceeCHhHhcCCCCCchhhHHHHHHHHHHHHcCCCCCCCCcCHH--HHHHHHhcCCC
Confidence 9999986543333333344567899999999988889999999999999999998 99998653211 11111111000
Q ss_pred CccchhhcccccCchhhhhHHHHHHHHHHHHHHHhccccCcCCCCCHHHHHHHHHHhHHh
Q 002021 904 ISTMEVVDANLLSQEDIHFVAKEQCVSFVFNLAMECTMEFPKQRINAKEIVTKLLKIRDS 963 (979)
Q Consensus 904 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~eil~~L~~~~~~ 963 (979)
...+..++..+.+++.+||+.||++||++.|++++|+.+...
T Consensus 264 ------------------~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~l~~~~~~ 305 (327)
T 2yfx_A 264 ------------------MDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYCTQD 305 (327)
T ss_dssp ------------------CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHC
T ss_pred ------------------CCCCCCCCHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHhcC
Confidence 001123456789999999999999999999999999988763
No 196
>3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria, structural GE structural genomics consortium, SGC, transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7}
Probab=100.00 E-value=3.1e-38 Score=355.61 Aligned_cols=276 Identities=24% Similarity=0.265 Sum_probs=209.3
Q ss_pred ccccHHHHHHhhCCCCCCceeeeecceEEEEEEc-CCCcEEEEEEeccccccchhcHHHHHHHHHhcC-----CCCeeeE
Q 002021 670 RMFSYLELCRATDGFSENNLIGRGGFGSVYKASL-GDGMEVAVKVFTSQCGRAFKSFDVECEIMKSIR-----HRNLIKV 743 (979)
Q Consensus 670 ~~~~~~~~~~~~~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~-----h~niv~l 743 (979)
..+++.+.....++|+..+.||+|+||.||+|.. .+++.||||++... ....+.+..|+++++.++ ||||+++
T Consensus 23 ~~~~~~~g~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~-~~~~~~~~~e~~~l~~l~~~~~~h~~iv~~ 101 (360)
T 3llt_A 23 VHFSWKKGMLLNNAFLVIRKMGDGTFGRVLLCQHIDNKKYYAVKVVRNI-KKYTRSAKIEADILKKIQNDDINNNNIVKY 101 (360)
T ss_dssp GSCCCCTTCEETTTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECSC-HHHHHHHHHHHHHHHHTCCCSTTGGGBCCE
T ss_pred eeeeeecceEecCEEEEEEEEcccCCeEEEEEEECCCCeEEEEEEeccc-hhhhhhhHHHHHHHHHhcccCCCCCCeecc
Confidence 3455555556678899999999999999999954 67899999998643 233456778999999996 9999999
Q ss_pred EEeeccCCeeEEEEEecCCCccceeeccCC-CCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCEEeCC-----
Q 002021 744 ISSCSNEEFKALVLEYMPHGSLEKYLYSSN-CILDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDD----- 817 (979)
Q Consensus 744 ~~~~~~~~~~~lv~E~~~~g~L~~~l~~~~-~~l~~~~~~~i~~~ia~~L~~LH~~~~~~i~H~Dik~~NIll~~----- 817 (979)
++++...+..++||||+ +++|.+++.... ..+++.+++.++.|++.||+||| +++|+||||||+||+++.
T Consensus 102 ~~~~~~~~~~~lv~e~~-~~~L~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH---~~~ivHrDlkp~NIll~~~~~~~ 177 (360)
T 3llt_A 102 HGKFMYYDHMCLIFEPL-GPSLYEIITRNNYNGFHIEDIKLYCIEILKALNYLR---KMSLTHTDLKPENILLDDPYFEK 177 (360)
T ss_dssp EEEEEETTEEEEEECCC-CCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEESCTTCCE
T ss_pred cceeeECCeeEEEEcCC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHH---HCCeeeCCCCcccEEEccccccc
Confidence 99999999999999999 889999987653 45899999999999999999999 999999999999999975
Q ss_pred --------------------CCcEEEEeeccccccCCCCCcceecccccCCCCCCccccCCCCCCCchhHHHHHHHHHHH
Q 002021 818 --------------------NMVAHLSDFSIAKMLTGEDQSMIQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMET 877 (979)
Q Consensus 818 --------------------~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el 877 (979)
++.+||+|||++....... ....||+.|+|||++.+..++.++||||+||++|||
T Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~~kl~DFG~a~~~~~~~-----~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el 252 (360)
T 3llt_A 178 SLITVRRVTDGKKIQIYRTKSTGIKLIDFGCATFKSDYH-----GSIINTRQYRAPEVILNLGWDVSSDMWSFGCVLAEL 252 (360)
T ss_dssp EEEEEECTTTCCEEEEEEESCCCEEECCCTTCEETTSCC-----CSCCSCGGGCCHHHHTTCCCCTTHHHHHHHHHHHHH
T ss_pred cccchhcccccccccccccCCCCEEEEeccCceecCCCC-----cCccCcccccCcHHHcCCCCCCccchHHHHHHHHHH
Confidence 7899999999998653221 345789999999999999999999999999999999
Q ss_pred HcCCCCCcccccCcchHhHhhhhhcCCc-----------cchhhcccccCc----h-----------hhhhHHHHHHHHH
Q 002021 878 FTGKKPTDEIFNGEMTLKHWVNDWLPIS-----------TMEVVDANLLSQ----E-----------DIHFVAKEQCVSF 931 (979)
Q Consensus 878 ~tg~~P~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~----~-----------~~~~~~~~~~~~~ 931 (979)
++|+.||......+ ..........+.. .....+...... . ...........+.
T Consensus 253 l~g~~pf~~~~~~~-~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 331 (360)
T 3llt_A 253 YTGSLLFRTHEHME-HLAMMESIIQPIPKNMLYEATKTNGSKYVNKDELKLAWPENASSINSIKHVKKCLPLYKIIKHEL 331 (360)
T ss_dssp HHSSCSCCCSSHHH-HHHHHHHHTCCCCHHHHHHHTTSGGGGGEETTTTEECTTTTCSCHHHHHHHHTCCCHHHHCCCHH
T ss_pred HHCCCCCCCCcHHH-HHHHHHHhcCCCCHHHHhhhhhccCccccCcccceecCcccccchhhhhhhhhcccccccchHHH
Confidence 99999997532211 1111111000000 000000000000 0 0000011112356
Q ss_pred HHHHHHhccccCcCCCCCHHHHHHH
Q 002021 932 VFNLAMECTMEFPKQRINAKEIVTK 956 (979)
Q Consensus 932 l~~l~~~cl~~dP~~Rps~~eil~~ 956 (979)
+.+++.+||+.||++|||+.|+++|
T Consensus 332 l~~li~~~L~~dP~~Rpta~elL~h 356 (360)
T 3llt_A 332 FCDFLYSILQIDPTLRPSPAELLKH 356 (360)
T ss_dssp HHHHHHHHCCSSGGGSCCHHHHTTS
T ss_pred HHHHHHHHhcCChhhCCCHHHHhcC
Confidence 8899999999999999999999865
No 197
>3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A*
Probab=100.00 E-value=2.1e-38 Score=351.88 Aligned_cols=271 Identities=21% Similarity=0.251 Sum_probs=197.5
Q ss_pred HHhhCCCCCCceeeeecceEEEEEE-cCCCcEEEEEEeccccc--cchhcHHHHHHHHHhcCCCCeeeEEEeeccCCeeE
Q 002021 678 CRATDGFSENNLIGRGGFGSVYKAS-LGDGMEVAVKVFTSQCG--RAFKSFDVECEIMKSIRHRNLIKVISSCSNEEFKA 754 (979)
Q Consensus 678 ~~~~~~~~~~~~lG~G~~g~Vy~~~-~~~~~~vAvK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~ 754 (979)
....++|+..+.||+|+||.||+|. ..+++.||||++..... ...+.+.+|++++++++||||+++++++.+++..+
T Consensus 30 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~ 109 (329)
T 3gbz_A 30 ATSIDRYRRITKLGEGTYGEVYKAIDTVTNETVAIKRIRLEHEEEGVPGTAIREVSLLKELQHRNIIELKSVIHHNHRLH 109 (329)
T ss_dssp --CGGGEEEEEEEEECSSSEEEEEEETTTTEEEEEEECCCCC--------CHHHHHHGGGCCCTTBCCEEEEEEETTEEE
T ss_pred ccchhhEEEEEEEEecCCeEEEEEEECCCCceEEEEEEcccccccccchhHHHHHHHHHHcCCCCcceEEEEEecCCEEE
Confidence 3445789999999999999999995 56899999999865432 23456778999999999999999999999999999
Q ss_pred EEEEecCCCccceeeccCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCEEe-----CCCCcEEEEeeccc
Q 002021 755 LVLEYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLL-----DDNMVAHLSDFSIA 829 (979)
Q Consensus 755 lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~i~H~Dik~~NIll-----~~~~~~kl~Dfg~~ 829 (979)
+||||+++ +|.+++.... .+++..++.++.|++.||+||| +++|+||||||+||++ +.++.+||+|||++
T Consensus 110 lv~e~~~~-~L~~~~~~~~-~~~~~~~~~i~~ql~~~l~~LH---~~~ivH~Dlkp~NIll~~~~~~~~~~~kl~Dfg~a 184 (329)
T 3gbz_A 110 LIFEYAEN-DLKKYMDKNP-DVSMRVIKSFLYQLINGVNFCH---SRRCLHRDLKPQNLLLSVSDASETPVLKIGDFGLA 184 (329)
T ss_dssp EEEECCSE-EHHHHHHHCT-TCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEEEC-----CCEEEECCTTHH
T ss_pred EEEecCCC-CHHHHHhhcC-CCCHHHHHHHHHHHHHHHHHHH---hCCEECCCCCHHHEEEecCCCCccceEEECcCCCc
Confidence 99999974 9999987654 5899999999999999999999 8999999999999999 45556999999999
Q ss_pred cccCCCCCcceecccccCCCCCCccccCCC-CCCCchhHHHHHHHHHHHHcCCCCCcccccCcchHhHhhhhhc-C-C-c
Q 002021 830 KMLTGEDQSMIQTQTLATIGYMAPEYGREG-RVSANGDVYSFGIMLMETFTGKKPTDEIFNGEMTLKHWVNDWL-P-I-S 905 (979)
Q Consensus 830 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwslG~il~el~tg~~P~~~~~~~~~~~~~~~~~~~-~-~-~ 905 (979)
........ ......+|+.|+|||++.+. .++.++||||+||++|||++|+.||......+. ......... + . .
T Consensus 185 ~~~~~~~~--~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~-~~~~~~~~~~~~~~~ 261 (329)
T 3gbz_A 185 RAFGIPIR--QFTHEIITLWYRPPEILLGSRHYSTSVDIWSIACIWAEMLMKTPLFPGDSEIDQ-LFKIFEVLGLPDDTT 261 (329)
T ss_dssp HHHC-------------CCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHH-HHHHHHHHCCCCTTT
T ss_pred cccCCccc--ccCCCcCCccccCHHHhcCCCCCCcHHHHHHHHHHHHHHHHCCCCcCCCCHHHH-HHHHHHHhCCCchhh
Confidence 87643222 22445689999999998764 489999999999999999999999975322211 111111100 0 0 0
Q ss_pred cchhhc-----cc--ccCchhhhhHHHHHHHHHHHHHHHhccccCcCCCCCHHHHHHH
Q 002021 906 TMEVVD-----AN--LLSQEDIHFVAKEQCVSFVFNLAMECTMEFPKQRINAKEIVTK 956 (979)
Q Consensus 906 ~~~~~~-----~~--~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~eil~~ 956 (979)
...... .. ..............++.++.+++.+|++.||++|||+.|+++|
T Consensus 262 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h 319 (329)
T 3gbz_A 262 WPGVTALPDWKQSFPKFRGKTLKRVLGALLDDEGLDLLTAMLEMDPVKRISAKNALEH 319 (329)
T ss_dssp STTGGGSTTCCTTCCCCCCCCHHHHHGGGSCHHHHHHHHHHTCSSGGGSCCHHHHHTS
T ss_pred hhhhhhhhhhhhhhhhhccccHhhhcccccCHHHHHHHHHHccCChhhCCCHHHHhCC
Confidence 000000 00 0011111222233456789999999999999999999999875
No 198
>3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase; structural genomics consortium, SGC, transferase; 2.37A {Cryptosporidium parvum iowa II}
Probab=100.00 E-value=2.2e-38 Score=360.40 Aligned_cols=269 Identities=22% Similarity=0.319 Sum_probs=193.5
Q ss_pred hhCCCCCCceeeeecceEEEEEE-cCCCcEEEEEEecccc--ccchhcHHHHHHHHHhcC-CCCeeeEEEeeccC--Cee
Q 002021 680 ATDGFSENNLIGRGGFGSVYKAS-LGDGMEVAVKVFTSQC--GRAFKSFDVECEIMKSIR-HRNLIKVISSCSNE--EFK 753 (979)
Q Consensus 680 ~~~~~~~~~~lG~G~~g~Vy~~~-~~~~~~vAvK~~~~~~--~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~--~~~ 753 (979)
..++|+..+.||+|+||.||+|. ..+|+.||||++.... ....+.+.+|+.+++.+. ||||+++++++..+ ...
T Consensus 7 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~l~~~~~~~~~~~~ 86 (388)
T 3oz6_A 7 VLRKYELVKKLGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQNSTDAQRTFREIMILTELSGHENIVNLLNVLRADNDRDV 86 (388)
T ss_dssp HHTTEEEEEC-------CEEEEEETTTCCEEEEEEECC--CCHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECTTSSCE
T ss_pred ccCceEEEEEeeeCCCeEEEEEEECCCCCEEEEEEecccccChHHHHHHHHHHHHHHhccCCCCCCeeeeEEecCCCCEE
Confidence 45789999999999999999994 5679999999986432 234456778999999997 99999999998644 478
Q ss_pred EEEEEecCCCccceeeccCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCEEeCCCCcEEEEeeccccccC
Q 002021 754 ALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFSIAKMLT 833 (979)
Q Consensus 754 ~lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~i~H~Dik~~NIll~~~~~~kl~Dfg~~~~~~ 833 (979)
|+||||++ ++|.+++... .+++..+..++.|++.||+||| +++|+||||||+||+++.++.+||+|||+++.+.
T Consensus 87 ~lv~e~~~-~~L~~~~~~~--~~~~~~~~~i~~qi~~~L~~LH---~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~ 160 (388)
T 3oz6_A 87 YLVFDYME-TDLHAVIRAN--ILEPVHKQYVVYQLIKVIKYLH---SGGLLHRDMKPSNILLNAECHVKVADFGLSRSFV 160 (388)
T ss_dssp EEEEECCS-EEHHHHHHHT--CCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEECTTCCEEECCCTTCEESS
T ss_pred EEEecccC-cCHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHH---hCCEEeCCCCHHHeEEcCCCCEEecCCccccccc
Confidence 99999997 5898888764 6899999999999999999999 9999999999999999999999999999998653
Q ss_pred CCC-------------------CcceecccccCCCCCCccccCC-CCCCCchhHHHHHHHHHHHHcCCCCCcccccCcch
Q 002021 834 GED-------------------QSMIQTQTLATIGYMAPEYGRE-GRVSANGDVYSFGIMLMETFTGKKPTDEIFNGEMT 893 (979)
Q Consensus 834 ~~~-------------------~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwslG~il~el~tg~~P~~~~~~~~~~ 893 (979)
... ........+||+.|+|||++.+ ..++.++||||+||++|||++|+.||...... ..
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~-~~ 239 (388)
T 3oz6_A 161 NIRRVTNNIPLSINENTENFDDDQPILTDYVATRWYRAPEILLGSTKYTKGIDMWSLGCILGEILCGKPIFPGSSTM-NQ 239 (388)
T ss_dssp SCCCCCCCGGGCCC---------------CCCGGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHH-HH
T ss_pred ccccccccccccccccccccccccccccCCcccCCcCCHHHhcCCCCCCChhhHHHHHHHHHHHHhCCCCCCCCCHH-HH
Confidence 211 1112244579999999999876 67899999999999999999999999753211 11
Q ss_pred HhHhhhhhcCCccchhhcc---------------------cccCchh-------hhhHHHHHHHHHHHHHHHhccccCcC
Q 002021 894 LKHWVNDWLPISTMEVVDA---------------------NLLSQED-------IHFVAKEQCVSFVFNLAMECTMEFPK 945 (979)
Q Consensus 894 ~~~~~~~~~~~~~~~~~~~---------------------~~~~~~~-------~~~~~~~~~~~~l~~l~~~cl~~dP~ 945 (979)
+....... .....+.... ....... .....+..+++++.+++.+||+.||+
T Consensus 240 ~~~i~~~~-~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~~L~~dP~ 318 (388)
T 3oz6_A 240 LERIIGVI-DFPSNEDVESIQSPFAKTMIESLKEKVEIRQSNKRDIFTKWKNLLLKINPKADCNEEALDLLDKLLQFNPN 318 (388)
T ss_dssp HHHHHHHH-CCCCHHHHHTSCCSSHHHHHHHHHHHCC-----CCCCHHHHHHHHHHHCTTCCCCHHHHHHHHHHCCSSGG
T ss_pred HHHHHHhc-CCCCHHHHHhccCHHHHHHHHhCcccccccCCCHHHhCcchhhhcccccccccCCHHHHHHHHHhhccCcc
Confidence 11111111 1000000000 0000000 00001114567899999999999999
Q ss_pred CCCCHHHHHHH
Q 002021 946 QRINAKEIVTK 956 (979)
Q Consensus 946 ~Rps~~eil~~ 956 (979)
+|||+.|+++|
T Consensus 319 ~R~t~~e~l~H 329 (388)
T 3oz6_A 319 KRISANDALKH 329 (388)
T ss_dssp GSCCHHHHTTS
T ss_pred cCCCHHHHhCC
Confidence 99999999988
No 199
>3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ...
Probab=100.00 E-value=5.9e-38 Score=340.73 Aligned_cols=251 Identities=24% Similarity=0.324 Sum_probs=202.4
Q ss_pred CCCCCCceeeeecceEEEEEEc-CCCcEEEEEEeccccc------cchhcHHHHHHHHHhcCCCCeeeEEEeeccCCeeE
Q 002021 682 DGFSENNLIGRGGFGSVYKASL-GDGMEVAVKVFTSQCG------RAFKSFDVECEIMKSIRHRNLIKVISSCSNEEFKA 754 (979)
Q Consensus 682 ~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vAvK~~~~~~~------~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~ 754 (979)
++|+..+.||+|+||.||+|.. .+++.||||++..... ...+.+.+|++++++++||||+++++++.+++..+
T Consensus 5 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~ 84 (283)
T 3bhy_A 5 DHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIRHPNIITLHDIFENKTDVV 84 (283)
T ss_dssp HHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEE
T ss_pred hhhhhHHhhcccCceEEEEEEEcCCCCeeehHHhhhccccccccchHHHHHHHHHHHHHhCCCCCeeehhheecCCCeEE
Confidence 4588889999999999999955 4799999999865421 13567889999999999999999999999999999
Q ss_pred EEEEecCCCccceeeccCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCEEeCCCC----cEEEEeecccc
Q 002021 755 LVLEYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNM----VAHLSDFSIAK 830 (979)
Q Consensus 755 lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~i~H~Dik~~NIll~~~~----~~kl~Dfg~~~ 830 (979)
+||||+++++|.+++... ..+++.+++.++.|++.||+||| +++|+||||||+||+++.++ .+||+|||.+.
T Consensus 85 lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dl~p~Nil~~~~~~~~~~~kl~dfg~~~ 160 (283)
T 3bhy_A 85 LILELVSGGELFDFLAEK-ESLTEDEATQFLKQILDGVHYLH---SKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAH 160 (283)
T ss_dssp EEEECCCSCBHHHHHHHH-SSCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEESCSSSSSCCEEECCCTTCE
T ss_pred EEEeecCCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHH---hCCccCCCCChHHEEEecCCCCCCceEEEecccce
Confidence 999999999999998654 36899999999999999999999 99999999999999999877 89999999998
Q ss_pred ccCCCCCcceecccccCCCCCCccccCCCCCCCchhHHHHHHHHHHHHcCCCCCcccccCcchHhHhhhhhcCCccchhh
Q 002021 831 MLTGEDQSMIQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFTGKKPTDEIFNGEMTLKHWVNDWLPISTMEVV 910 (979)
Q Consensus 831 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~ 910 (979)
...... ......+++.|+|||.+.+..++.++||||+|+++|||++|+.||......+ ........
T Consensus 161 ~~~~~~---~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~-~~~~~~~~---------- 226 (283)
T 3bhy_A 161 KIEAGN---EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGETKQE-TLTNISAV---------- 226 (283)
T ss_dssp ECC-----------CCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCSSHHH-HHHHHHTT----------
T ss_pred eccCCC---cccccCCCcCccCcceecCCCCCcchhhhhHHHHHHHHHHCCCCCCCcchHH-HHHHhHhc----------
Confidence 764322 1234568999999999998899999999999999999999999986532111 11111000
Q ss_pred cccccCchhhhhHHHHHHHHHHHHHHHhccccCcCCCCCHHHHHHH
Q 002021 911 DANLLSQEDIHFVAKEQCVSFVFNLAMECTMEFPKQRINAKEIVTK 956 (979)
Q Consensus 911 ~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~eil~~ 956 (979)
...........++..+.+++.+||..||++|||+.|+++|
T Consensus 227 ------~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~h 266 (283)
T 3bhy_A 227 ------NYDFDEEYFSNTSELAKDFIRRLLVKDPKRRMTIAQSLEH 266 (283)
T ss_dssp ------CCCCCHHHHTTCCHHHHHHHHTTSCSSGGGSCCHHHHHHC
T ss_pred ------ccCCcchhcccCCHHHHHHHHHHccCCHhHCcCHHHHHhC
Confidence 0000112223456678999999999999999999999985
No 200
>4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A*
Probab=100.00 E-value=5.6e-39 Score=371.85 Aligned_cols=249 Identities=23% Similarity=0.278 Sum_probs=195.9
Q ss_pred hCCCCCCceeeeecceEEEEEE-cCCCcEEEEEEeccc---cccchhcHHHHHHHHHhcCCCCeeeEEEeeccCCeeEEE
Q 002021 681 TDGFSENNLIGRGGFGSVYKAS-LGDGMEVAVKVFTSQ---CGRAFKSFDVECEIMKSIRHRNLIKVISSCSNEEFKALV 756 (979)
Q Consensus 681 ~~~~~~~~~lG~G~~g~Vy~~~-~~~~~~vAvK~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 756 (979)
.++|+..+.||+|+||.||+|. ..+|+.||||++... .......+.+|+++++.++||||+++++++.+.+..++|
T Consensus 147 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~~~~~lv 226 (446)
T 4ejn_A 147 MNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQTHDRLCFV 226 (446)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHC-------------CCCCCSCTTSCCEEEEEEETTEEEEE
T ss_pred hHHcEEeEEEeeCcCEEEEEEEEcCCCCEEEEEEEEhhhhhhhHHHHHHHHHHHHHHhCCCCeEeeEEEEEeeCCEEEEE
Confidence 3678899999999999999995 567999999998754 223445677899999999999999999999999999999
Q ss_pred EEecCCCccceeeccCCCCCCHHHHHHHHHHHHHHHHHHhcCCC-CCeEecCCCCCCEEeCCCCcEEEEeeccccccCCC
Q 002021 757 LEYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGYS-APVIHCDLKPSNVLLDDNMVAHLSDFSIAKMLTGE 835 (979)
Q Consensus 757 ~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~-~~i~H~Dik~~NIll~~~~~~kl~Dfg~~~~~~~~ 835 (979)
|||+++|+|.+++.... .+++..+..++.|++.||+||| + ++|+||||||+||+++.++.+||+|||+++.....
T Consensus 227 ~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~qi~~aL~~LH---~~~giiHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~ 302 (446)
T 4ejn_A 227 MEYANGGELFFHLSRER-VFSEDRARFYGAEIVSALDYLH---SEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKD 302 (446)
T ss_dssp ECCCSSCBHHHHHHHHS-CCCHHHHHHHHHHHHHHHHHHH---HHTCCCCCCCCGGGEEECSSSCEEECCCCCCCTTCC-
T ss_pred EeeCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHh---hcCCEEECCCCHHHEEECCCCCEEEccCCCceeccCC
Confidence 99999999999887643 6899999999999999999999 7 89999999999999999999999999999864322
Q ss_pred CCcceecccccCCCCCCccccCCCCCCCchhHHHHHHHHHHHHcCCCCCcccccCcchHhHhhhhhcCCccchhhccccc
Q 002021 836 DQSMIQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFTGKKPTDEIFNGEMTLKHWVNDWLPISTMEVVDANLL 915 (979)
Q Consensus 836 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 915 (979)
. .......||+.|+|||++.+..++.++||||+||++|||++|+.||...... .....+... ..
T Consensus 303 ~--~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~--~~~~~i~~~-----------~~- 366 (446)
T 4ejn_A 303 G--ATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHE--KLFELILME-----------EI- 366 (446)
T ss_dssp ------CCSSSCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHH--HHHHHHHHC-----------CC-
T ss_pred C--cccccccCCccccCHhhcCCCCCCCccchhhhHHHHHHHhhCCCCCCCCCHH--HHHHHHHhC-----------CC-
Confidence 2 2234567999999999999999999999999999999999999999653211 111100000 00
Q ss_pred CchhhhhHHHHHHHHHHHHHHHhccccCcCCCC-----CHHHHHHH
Q 002021 916 SQEDIHFVAKEQCVSFVFNLAMECTMEFPKQRI-----NAKEIVTK 956 (979)
Q Consensus 916 ~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rp-----s~~eil~~ 956 (979)
..+..+++++.+++.+||+.||.+|| +++|+++|
T Consensus 367 -------~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~t~~ell~h 405 (446)
T 4ejn_A 367 -------RFPRTLGPEAKSLLSGLLKKDPKQRLGGGSEDAKEIMQH 405 (446)
T ss_dssp -------CCCTTSCHHHHHHHHHHTCSSTTTSTTCSTTTHHHHHTS
T ss_pred -------CCCccCCHHHHHHHHHHcccCHHHhCCCCCCCHHHHHhC
Confidence 01123456789999999999999999 99999875
No 201
>3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii}
Probab=100.00 E-value=2.4e-38 Score=343.97 Aligned_cols=250 Identities=24% Similarity=0.344 Sum_probs=197.5
Q ss_pred CCCCCCceeeeecceEEEEEE-cCCCcEEEEEEecccc-ccchhcHHHHHHHHHhcCCCCeeeEEEeeccCCeeEEEEEe
Q 002021 682 DGFSENNLIGRGGFGSVYKAS-LGDGMEVAVKVFTSQC-GRAFKSFDVECEIMKSIRHRNLIKVISSCSNEEFKALVLEY 759 (979)
Q Consensus 682 ~~~~~~~~lG~G~~g~Vy~~~-~~~~~~vAvK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~E~ 759 (979)
+.|...+.||+|+||.||+|. ..++..||+|++.... ....+.+.+|++++++++||||+++++++.+.+..++||||
T Consensus 22 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~ 101 (285)
T 3is5_A 22 DLFIFKRKLGSGAFGDVHLVEERSSGLERVIKTINKDRSQVPMEQIEAEIEVLKSLDHPNIIKIFEVFEDYHNMYIVMET 101 (285)
T ss_dssp HHEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGCCSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEECC
T ss_pred hheeecceeccCCCeEEEEEEEccCCceEEEEEeeccccchhHHHHHHHHHHHHhCCCchHHhHHHheecCCeEEEEEEe
Confidence 568888999999999999995 4578999999987553 23457788999999999999999999999999999999999
Q ss_pred cCCCccceeeccC---CCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCEEe---CCCCcEEEEeeccccccC
Q 002021 760 MPHGSLEKYLYSS---NCILDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLL---DDNMVAHLSDFSIAKMLT 833 (979)
Q Consensus 760 ~~~g~L~~~l~~~---~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~i~H~Dik~~NIll---~~~~~~kl~Dfg~~~~~~ 833 (979)
+++|+|.+++... ...+++..++.++.|++.||+||| +++|+||||||+||++ +.++.+||+|||++....
T Consensus 102 ~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH---~~~ivH~dikp~NIl~~~~~~~~~~kl~Dfg~a~~~~ 178 (285)
T 3is5_A 102 CEGGELLERIVSAQARGKALSEGYVAELMKQMMNALAYFH---SQHVVHKDLKPENILFQDTSPHSPIKIIDFGLAELFK 178 (285)
T ss_dssp CSCCBHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCSGGGEEESSSSTTCCEEECCCCCCCC--
T ss_pred CCCCcHHHHHHhhhhcccCCCHHHHHHHHHHHHHHHHHHH---hCCEEECCCCHHHEEEecCCCCCCEEEEeeecceecC
Confidence 9999999988543 356999999999999999999999 9999999999999999 456789999999998654
Q ss_pred CCCCcceecccccCCCCCCccccCCCCCCCchhHHHHHHHHHHHHcCCCCCcccccCcchHhHhhhhhcCCccchhhccc
Q 002021 834 GEDQSMIQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFTGKKPTDEIFNGEMTLKHWVNDWLPISTMEVVDAN 913 (979)
Q Consensus 834 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 913 (979)
... ......||+.|+|||.+. +.++.++||||+|+++|||++|+.||......+. .............
T Consensus 179 ~~~---~~~~~~~t~~y~aPE~~~-~~~~~~~Di~slG~il~~ll~g~~pf~~~~~~~~--~~~~~~~~~~~~~------ 246 (285)
T 3is5_A 179 SDE---HSTNAAGTALYMAPEVFK-RDVTFKCDIWSAGVVMYFLLTGCLPFTGTSLEEV--QQKATYKEPNYAV------ 246 (285)
T ss_dssp -----------CTTGGGCCHHHHT-TCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHH--HHHHHHCCCCCCC------
T ss_pred Ccc---cCcCcccccCcCChHHhc-cCCCcccCeehHHHHHHHHHhCCCCCCCCCHHHH--HhhhccCCccccc------
Confidence 322 224456899999999875 5688999999999999999999999975322111 1110000000000
Q ss_pred ccCchhhhhHHHHHHHHHHHHHHHhccccCcCCCCCHHHHHHH
Q 002021 914 LLSQEDIHFVAKEQCVSFVFNLAMECTMEFPKQRINAKEIVTK 956 (979)
Q Consensus 914 ~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~eil~~ 956 (979)
.....++.+.+++.+|++.||++|||+.|+++|
T Consensus 247 ----------~~~~~~~~~~~li~~~L~~dP~~Rps~~e~l~h 279 (285)
T 3is5_A 247 ----------ECRPLTPQAVDLLKQMLTKDPERRPSAAQVLHH 279 (285)
T ss_dssp ------------CCCCHHHHHHHHHHTCSCTTTSCCHHHHHTS
T ss_pred ----------ccCcCCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 001134568899999999999999999999875
No 202
>1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=5.4e-38 Score=351.24 Aligned_cols=271 Identities=22% Similarity=0.252 Sum_probs=201.9
Q ss_pred HhhCCCCCCceeeeecceEEEEEEc-CCCcEEEEEEeccccc-----cchhcHHHHHHHHHhcCCCCeeeEEEeeccCCe
Q 002021 679 RATDGFSENNLIGRGGFGSVYKASL-GDGMEVAVKVFTSQCG-----RAFKSFDVECEIMKSIRHRNLIKVISSCSNEEF 752 (979)
Q Consensus 679 ~~~~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vAvK~~~~~~~-----~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~ 752 (979)
...++|+..+.||+|+||.||+|.. .+|+.||||++..... ...+.+.+|+++++.++||||+++++++.+.+.
T Consensus 7 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~ 86 (346)
T 1ua2_A 7 SRAKRYEKLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIGLLDAFGHKSN 86 (346)
T ss_dssp ------CEEEEEEEETTEEEEEEECSSCCSEEEEEEC------------CTHHHHHHHHHHHCCCTTBCCEEEEECCTTC
T ss_pred HHhcccEEEeEEeecCCEEEEEEEECCCCcEEEEEEEecCCcchhhhhhhHHHHHHHHHHhhCCCCCCCeEEEEEeeCCc
Confidence 3457899999999999999999965 4689999999864321 123567899999999999999999999999999
Q ss_pred eEEEEEecCCCccceeeccCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCEEeCCCCcEEEEeecccccc
Q 002021 753 KALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFSIAKML 832 (979)
Q Consensus 753 ~~lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~i~H~Dik~~NIll~~~~~~kl~Dfg~~~~~ 832 (979)
.++||||+++ +|.+++......+++.++..++.|+++||+||| +++|+||||||+||+++.++.+||+|||+++..
T Consensus 87 ~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH---~~~ivH~Dlkp~Nil~~~~~~~kl~Dfg~a~~~ 162 (346)
T 1ua2_A 87 ISLVFDFMET-DLEVIIKDNSLVLTPSHIKAYMLMTLQGLEYLH---QHWILHRDLKPNNLLLDENGVLKLADFGLAKSF 162 (346)
T ss_dssp CEEEEECCSE-EHHHHHTTCCSSCCSSHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEECTTCCEEECCCGGGSTT
T ss_pred eEEEEEcCCC-CHHHHHHhcCcCCCHHHHHHHHHHHHHHHHHHH---HCCEECCCCCHHHEEEcCCCCEEEEecccceec
Confidence 9999999986 898888877667899999999999999999999 999999999999999999999999999999876
Q ss_pred CCCCCcceecccccCCCCCCccccCCC-CCCCchhHHHHHHHHHHHHcCCCCCcccccCcchHhHhhhhhc---CCccch
Q 002021 833 TGEDQSMIQTQTLATIGYMAPEYGREG-RVSANGDVYSFGIMLMETFTGKKPTDEIFNGEMTLKHWVNDWL---PISTME 908 (979)
Q Consensus 833 ~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwslG~il~el~tg~~P~~~~~~~~~~~~~~~~~~~---~~~~~~ 908 (979)
.... .......+|+.|+|||.+.+. .++.++||||+||++|||++|..||......+ .+........ ...+.+
T Consensus 163 ~~~~--~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~~~~~~~~~~-~~~~i~~~~~~~~~~~~~~ 239 (346)
T 1ua2_A 163 GSPN--RAYTHQVVTRWYRAPELLFGARMYGVGVDMWAVGCILAELLLRVPFLPGDSDLD-QLTRIFETLGTPTEEQWPD 239 (346)
T ss_dssp TSCC--CCCCCSCCCCTTCCHHHHTTCSCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHH-HHHHHHHHHCCCCTTTSSS
T ss_pred cCCc--ccCCcccccccccCchHhhCCCCCCchhhhHhHHHHHHHHHHCCCCCCCCCHHH-HHHHHHHHcCCCChhhhhh
Confidence 4332 223456789999999998654 58899999999999999999999986532211 1111111110 000000
Q ss_pred h---hcccccCc--hhhhhHHHHHHHHHHHHHHHhccccCcCCCCCHHHHHHH
Q 002021 909 V---VDANLLSQ--EDIHFVAKEQCVSFVFNLAMECTMEFPKQRINAKEIVTK 956 (979)
Q Consensus 909 ~---~~~~~~~~--~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~eil~~ 956 (979)
. .+...... ..........++.++.+++.+|++.||++|||+.|+++|
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 292 (346)
T 1ua2_A 240 MCSLPDYVTFKSFPGIPLHHIFSAAGDDLLDLIQGLFLFNPCARITATQALKM 292 (346)
T ss_dssp TTSSTTCCCCCCCCCCCHHHHCTTCCHHHHHHHHHHHCSSTTTSCCHHHHHTS
T ss_pred hccCcccccccccCCCChHHhhccCCHHHHHHHHHHhccChhhCCCHHHHhcC
Confidence 0 00000000 000011123456779999999999999999999999987
No 203
>1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A*
Probab=100.00 E-value=2.6e-38 Score=344.97 Aligned_cols=259 Identities=23% Similarity=0.361 Sum_probs=206.5
Q ss_pred CCCCCCc-eeeeecceEEEEEEc---CCCcEEEEEEeccccc--cchhcHHHHHHHHHhcCCCCeeeEEEeeccCCeeEE
Q 002021 682 DGFSENN-LIGRGGFGSVYKASL---GDGMEVAVKVFTSQCG--RAFKSFDVECEIMKSIRHRNLIKVISSCSNEEFKAL 755 (979)
Q Consensus 682 ~~~~~~~-~lG~G~~g~Vy~~~~---~~~~~vAvK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 755 (979)
+.|+..+ .||+|+||.||+|.. .+++.||||++..... ...+.+.+|+++++.++||||+++++++ +.+..++
T Consensus 16 ~~y~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~-~~~~~~l 94 (291)
T 1xbb_A 16 KLLTLEDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGIC-EAESWML 94 (291)
T ss_dssp GGEEEEEEEEEECSSEEEEEEEEECSSSEEEEEEEEEC-----CHHHHHHHHHHHHHHTCCCTTBCCEEEEE-ESSSEEE
T ss_pred hhhhhccCccccccCeeeEeeeecCCCceeeEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCEEEEEEEE-CCCCcEE
Confidence 4566666 999999999999943 3578899999875432 2356788999999999999999999999 5667899
Q ss_pred EEEecCCCccceeeccCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCEEeCCCCcEEEEeeccccccCCC
Q 002021 756 VLEYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFSIAKMLTGE 835 (979)
Q Consensus 756 v~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~i~H~Dik~~NIll~~~~~~kl~Dfg~~~~~~~~ 835 (979)
||||+++++|.+++.... .+++.+++.++.|++.||+||| +++|+||||||+||+++.++.+||+|||++......
T Consensus 95 v~e~~~~~~L~~~l~~~~-~~~~~~~~~i~~qi~~~l~~LH---~~~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~ 170 (291)
T 1xbb_A 95 VMEMAELGPLNKYLQQNR-HVKDKNIIELVHQVSMGMKYLE---ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRAD 170 (291)
T ss_dssp EEECCTTEEHHHHHHHCT-TCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEEEETTEEEECCCTTCEECCTT
T ss_pred EEEeCCCCCHHHHHHhCc-CCCHHHHHHHHHHHHHHHHHHH---hCCeEcCCCCcceEEEeCCCcEEEccCCcceeeccC
Confidence 999999999999997653 5899999999999999999999 999999999999999999999999999999876543
Q ss_pred CCcc-eecccccCCCCCCccccCCCCCCCchhHHHHHHHHHHHHc-CCCCCcccccCcchHhHhhhhhcCCccchhhccc
Q 002021 836 DQSM-IQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFT-GKKPTDEIFNGEMTLKHWVNDWLPISTMEVVDAN 913 (979)
Q Consensus 836 ~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~t-g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 913 (979)
.... ......+++.|+|||.+.+..+++++||||+|+++|||++ |+.||...... .....+.....
T Consensus 171 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~--~~~~~~~~~~~---------- 238 (291)
T 1xbb_A 171 ENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGS--EVTAMLEKGER---------- 238 (291)
T ss_dssp CSEEEC----CCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCCSSTTCCHH--HHHHHHHTTCC----------
T ss_pred CCcccccccCCCCceeeChHHhccCCCChhhhHHHHHHHHHHHHhcCCCCCCCCCHH--HHHHHHHcCCC----------
Confidence 3221 1233456788999999988889999999999999999999 99998753221 11111111000
Q ss_pred ccCchhhhhHHHHHHHHHHHHHHHhccccCcCCCCCHHHHHHHHHHhHHhhc
Q 002021 914 LLSQEDIHFVAKEQCVSFVFNLAMECTMEFPKQRINAKEIVTKLLKIRDSLL 965 (979)
Q Consensus 914 ~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~eil~~L~~~~~~~~ 965 (979)
...+..++..+.+++.+||+.||++||++.|+++.|+++..+..
T Consensus 239 --------~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~~~~~~~ 282 (291)
T 1xbb_A 239 --------MGCPAGCPREMYDLMNLCWTYDVENRPGFAAVELRLRNYYYDVV 282 (291)
T ss_dssp --------CCCCTTCCHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHHHHHH
T ss_pred --------CCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHHHh
Confidence 01112456679999999999999999999999999999987654
No 204
>2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens}
Probab=100.00 E-value=4.6e-37 Score=359.88 Aligned_cols=347 Identities=23% Similarity=0.223 Sum_probs=193.0
Q ss_pred cEEEccCCccCchhhhhhhccCCcccCCCCccceeecccccccccccccccCCCCCCceecCCCeeeecCCccccccCcc
Q 002021 147 QHLDLSSNALSGEIRANICREIPREFGNLPELELMSLAANNLQGKIPLKIGNLRNLEKLDIGDNKLVGIAPIAIFNVSTL 226 (979)
Q Consensus 147 ~~L~Ls~N~l~~~~~~~~~~~ip~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L 226 (979)
+.++.+++.++ .+|..+. ++++.|+|++|++++..|..|.++++|++|+|++|+++++.|.+|.++++|
T Consensus 14 ~~v~c~~~~l~---------~ip~~~~--~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L 82 (477)
T 2id5_A 14 RAVLCHRKRFV---------AVPEGIP--TETRLLDLGKNRIKTLNQDEFASFPHLEELELNENIVSAVEPGAFNNLFNL 82 (477)
T ss_dssp TEEECCSCCCS---------SCCSCCC--TTCSEEECCSSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTC
T ss_pred CEEEeCCCCcC---------cCCCCCC--CCCcEEECCCCccceECHhHccCCCCCCEEECCCCccCEeChhhhhCCccC
Confidence 45666666654 2454432 355666666666665555556666666666666666655555555444444
Q ss_pred ceeeccCCCCcCCCcccccCCCCCcCEEEccCCccccccCcccccCCCCcEEeccccccccccCccccccccccceeccc
Q 002021 227 KILGLQDNSLSGCLSSIGYARLPNLEILSLWGNNFSGTIPRFIFNASKLSILDLEGNSFSGFIPNTFGNLRNLSWLVLSD 306 (979)
Q Consensus 227 ~~L~L~~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~ 306 (979)
+.|+|++|+++. ..+..|.++++|++|+|++|++++..+..|.++++|++|+|++
T Consensus 83 ~~L~L~~n~l~~-------------------------~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~l~~ 137 (477)
T 2id5_A 83 RTLGLRSNRLKL-------------------------IPLGVFTGLSNLTKLDISENKIVILLDYMFQDLYNLKSLEVGD 137 (477)
T ss_dssp CEEECCSSCCCS-------------------------CCTTSSTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEEECC
T ss_pred CEEECCCCcCCc-------------------------cCcccccCCCCCCEEECCCCccccCChhHccccccCCEEECCC
Confidence 444444444443 2222333344444444444444443343444433333333333
Q ss_pred cccccccchhhhhhcccCCCCccEEEccCCCCcccCCccccccccccccEEEccCccccCCCCccccCCCcccEEEecCC
Q 002021 307 NYLTSSTQELSFLSSLSNCKFLKYFDLSYNPLYRILPRTTVGNLSHSLEEFKMSNCNISGGIPEEISNLTNLRTIYLGGN 386 (979)
Q Consensus 307 N~l~~~~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~~L~~L~L~~n~i~~~~p~~l~~l~~L~~L~L~~N 386 (979)
|.++.. .+..|..+++|++|+|++|
T Consensus 138 n~l~~~-------------------------------------------------------~~~~~~~l~~L~~L~l~~n 162 (477)
T 2id5_A 138 NDLVYI-------------------------------------------------------SHRAFSGLNSLEQLTLEKC 162 (477)
T ss_dssp TTCCEE-------------------------------------------------------CTTSSTTCTTCCEEEEESC
T ss_pred Ccccee-------------------------------------------------------ChhhccCCCCCCEEECCCC
Confidence 333221 2223333444444444444
Q ss_pred CCCchhHHhhhcCCCCcEEEecCcccCCCccccccCCCCCceEecCCCcccccCCccccCCCcCceEecCCCccccccc-
Q 002021 387 KLNGSILITLSKLQKLQDLGLKDNKLEGSIPYDICNLAELYRLDLDGNKLSGSIPACFSNLTSLRIVSLGSNELTSIPL- 465 (979)
Q Consensus 387 ~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~lp~- 465 (979)
++++..+..|..+++|+.|++++|.+.+..+..|..+++|+.|++++|.+.+.+|.......+|++|++++|+++.+|.
T Consensus 163 ~l~~~~~~~l~~l~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~l~~~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~ 242 (477)
T 2id5_A 163 NLTSIPTEALSHLHGLIVLRLRHLNINAIRDYSFKRLYRLKVLEISHWPYLDTMTPNCLYGLNLTSLSITHCNLTAVPYL 242 (477)
T ss_dssp CCSSCCHHHHTTCTTCCEEEEESCCCCEECTTCSCSCTTCCEEEEECCTTCCEECTTTTTTCCCSEEEEESSCCCSCCHH
T ss_pred cCcccChhHhcccCCCcEEeCCCCcCcEeChhhcccCcccceeeCCCCccccccCcccccCccccEEECcCCcccccCHH
Confidence 4444444444455555555555555554444455555555666665555555555554455566666666666666663
Q ss_pred cccCcCCCcEEEeccccccCCCccccccccccceEeccCCccCcccchhhcCCcccceeecCCccccCCCCCcccccccc
Q 002021 466 TFWNLKDILNLNFSSNFLTGSLPLEIGSLKVLVGIDLSRNNFSGVIPTEIGGLKNLEYLFLGYNRLQGSIPNSFGDLISL 545 (979)
Q Consensus 466 ~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L 545 (979)
.+..+++|+.|+|++|.+++..+..|..+++|+.|+|++|++++..|..|.++++|+.|+|++|+|++..+..|..+++|
T Consensus 243 ~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L 322 (477)
T 2id5_A 243 AVRHLVYLRFLNLSYNPISTIEGSMLHELLRLQEIQLVGGQLAVVEPYAFRGLNYLRVLNVSGNQLTTLEESVFHSVGNL 322 (477)
T ss_dssp HHTTCTTCCEEECCSSCCCEECTTSCTTCTTCCEEECCSSCCSEECTTTBTTCTTCCEEECCSSCCSCCCGGGBSCGGGC
T ss_pred HhcCccccCeeECCCCcCCccChhhccccccCCEEECCCCccceECHHHhcCcccCCEEECCCCcCceeCHhHcCCCccc
Confidence 45566666677777776666666667777777777777777777777777777777777777777776666667777777
Q ss_pred cccccccccccccCCccccCccccCeEeccCCcccccCCC
Q 002021 546 KFLNLSNNNLSGVIPASLEKLSYLEDLNLSFNQLEGKIPR 585 (979)
Q Consensus 546 ~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~ 585 (979)
+.|+|++|.++...+. ..-...+..+.+.+|...|.-|.
T Consensus 323 ~~L~l~~N~l~c~c~~-~~~~~~~~~~~~~~~~~~C~~p~ 361 (477)
T 2id5_A 323 ETLILDSNPLACDCRL-LWVFRRRWRLNFNRQQPTCATPE 361 (477)
T ss_dssp CEEECCSSCEECSGGG-HHHHTTTTSSCCTTCCCBEEESG
T ss_pred CEEEccCCCccCccch-HhHHhhhhccccCccCceeCCch
Confidence 7777777777643221 11122234455666776666664
No 205
>2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A
Probab=100.00 E-value=3.8e-38 Score=346.00 Aligned_cols=251 Identities=21% Similarity=0.306 Sum_probs=202.4
Q ss_pred hCCCCCCceeeeecceEEEEEEc-CCCcEEEEEEeccccccchhcHHHHHHHHHhcCCCCeeeEEEeeccCCeeEEEEEe
Q 002021 681 TDGFSENNLIGRGGFGSVYKASL-GDGMEVAVKVFTSQCGRAFKSFDVECEIMKSIRHRNLIKVISSCSNEEFKALVLEY 759 (979)
Q Consensus 681 ~~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~E~ 759 (979)
.+.|...+.||+|+||.||+|.. .+|+.||||++........+.+.+|+++++.++||||+++++++.+.+..++||||
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 87 (304)
T 2jam_A 8 RKTFIFMEVLGSGAFSEVFLVKQRLTGKLFALKCIKKSPAFRDSSLENEIAVLKKIKHENIVTLEDIYESTTHYYLVMQL 87 (304)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEECC------HHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEECC
T ss_pred hccceeeeeccCCCCceEEEEEECCCCCEEEEEEEecccccchHHHHHHHHHHHhCCCCCeeehhhhcccCCEEEEEEEc
Confidence 35688899999999999999954 57999999999765444456788999999999999999999999999999999999
Q ss_pred cCCCccceeeccCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCEEe---CCCCcEEEEeeccccccCCCC
Q 002021 760 MPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLL---DDNMVAHLSDFSIAKMLTGED 836 (979)
Q Consensus 760 ~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~i~H~Dik~~NIll---~~~~~~kl~Dfg~~~~~~~~~ 836 (979)
+++++|.+++...+ .+++.++..++.|++.|++||| +++|+||||||+||++ +.++.+||+|||++......
T Consensus 88 ~~~~~L~~~l~~~~-~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dikp~NIl~~~~~~~~~~kl~Dfg~~~~~~~~- 162 (304)
T 2jam_A 88 VSGGELFDRILERG-VYTEKDASLVIQQVLSAVKYLH---ENGIVHRDLKPENLLYLTPEENSKIMITDFGLSKMEQNG- 162 (304)
T ss_dssp CCSCBHHHHHHHHS-CCCHHHHHHHHHHHHHHHHHHH---HTTCCCCSCCGGGCEESSSSTTCCEEBCSCSTTCCCCCB-
T ss_pred CCCccHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHH---HCCccccCCCHHHEEEecCCCCCCEEEccCCcceecCCC-
Confidence 99999999886543 5899999999999999999999 8999999999999999 78899999999999764322
Q ss_pred CcceecccccCCCCCCccccCCCCCCCchhHHHHHHHHHHHHcCCCCCcccccCcchHhHhhhhhcCCccchhhcccccC
Q 002021 837 QSMIQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFTGKKPTDEIFNGEMTLKHWVNDWLPISTMEVVDANLLS 916 (979)
Q Consensus 837 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 916 (979)
......||+.|+|||.+.+..++.++||||+|+++|||++|+.||......+ ...........
T Consensus 163 ---~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~-~~~~i~~~~~~------------- 225 (304)
T 2jam_A 163 ---IMSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVITYILLCGYPPFYEETESK-LFEKIKEGYYE------------- 225 (304)
T ss_dssp ---TTHHHHSCCCBCCTTTBSSCSCCHHHHHHHHHHHHHHHHHSSCTTTTSCHHH-HHHHHHHCCCC-------------
T ss_pred ---ccccccCCCCccChHHhccCCCCchhhHHHHHHHHHHHHHCCCCCCCCCHHH-HHHHHHcCCCC-------------
Confidence 1234568999999999999899999999999999999999999986532111 11111110000
Q ss_pred chhhhhHHHHHHHHHHHHHHHhccccCcCCCCCHHHHHHH
Q 002021 917 QEDIHFVAKEQCVSFVFNLAMECTMEFPKQRINAKEIVTK 956 (979)
Q Consensus 917 ~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~eil~~ 956 (979)
........++.++.+++.+|+..||++|||+.|+++|
T Consensus 226 ---~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~h 262 (304)
T 2jam_A 226 ---FESPFWDDISESAKDFICHLLEKDPNERYTCEKALSH 262 (304)
T ss_dssp ---CCTTTTTTSCHHHHHHHHHHHCSSTTTSCCHHHHHTS
T ss_pred ---CCccccccCCHHHHHHHHHHcCCChhHCcCHHHHhcC
Confidence 0001112345678999999999999999999999986
No 206
>2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A*
Probab=100.00 E-value=1.3e-38 Score=357.81 Aligned_cols=244 Identities=26% Similarity=0.301 Sum_probs=191.3
Q ss_pred hCCCCCCceeeeecceEEEEEEc-CCCcEEEEEEecccc---ccchhcHHHHHHH-HHhcCCCCeeeEEEeeccCCeeEE
Q 002021 681 TDGFSENNLIGRGGFGSVYKASL-GDGMEVAVKVFTSQC---GRAFKSFDVECEI-MKSIRHRNLIKVISSCSNEEFKAL 755 (979)
Q Consensus 681 ~~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vAvK~~~~~~---~~~~~~~~~E~~~-l~~l~h~niv~l~~~~~~~~~~~l 755 (979)
.++|+..+.||+|+||.||+|+. .+++.||||++.+.. ....+.+.+|..+ ++.++||||+++++++.+.+..|+
T Consensus 37 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~e~~~ll~~~~hp~Iv~l~~~~~~~~~~~l 116 (373)
T 2r5t_A 37 PSDFHFLKVIGKGSFGKVLLARHKAEEVFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQTADKLYF 116 (373)
T ss_dssp GGGEEEEEEEECCTTCEEEEEEETTTCCEEEEEEEEGGGBC-------------CCBCCCCCTTBCCEEEEEECSSEEEE
T ss_pred hhheEEEEEEeeCCCeEEEEEEEcCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHHhCCCCCCCCEEEEEEeCCEEEE
Confidence 36788999999999999999954 568899999997543 2233455667766 567899999999999999999999
Q ss_pred EEEecCCCccceeeccCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCEEeCCCCcEEEEeeccccccCCC
Q 002021 756 VLEYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFSIAKMLTGE 835 (979)
Q Consensus 756 v~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~i~H~Dik~~NIll~~~~~~kl~Dfg~~~~~~~~ 835 (979)
||||+++|+|.+++...+ .+++..++.++.||+.||+||| +++|+||||||+||+++.++.+||+|||+++.....
T Consensus 117 v~E~~~gg~L~~~l~~~~-~~~~~~~~~~~~qi~~aL~~LH---~~givHrDlkp~NIll~~~g~ikL~DFG~a~~~~~~ 192 (373)
T 2r5t_A 117 VLDYINGGELFYHLQRER-CFLEPRARFYAAEIASALGYLH---SLNIVYRDLKPENILLDSQGHIVLTDFGLCKENIEH 192 (373)
T ss_dssp EEECCCSCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEECTTSCEEECCCCBCGGGBCC
T ss_pred EEeCCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---HCCceecCCCHHHEEECCCCCEEEeeCccccccccC
Confidence 999999999999987643 6889999999999999999999 999999999999999999999999999999864322
Q ss_pred CCcceecccccCCCCCCccccCCCCCCCchhHHHHHHHHHHHHcCCCCCcccccCcchHhHhhhhhcCCccchhhccccc
Q 002021 836 DQSMIQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFTGKKPTDEIFNGEMTLKHWVNDWLPISTMEVVDANLL 915 (979)
Q Consensus 836 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 915 (979)
. ......+||+.|+|||++.+..++.++||||+||++|||++|+.||......+ .+...... ..
T Consensus 193 ~--~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~~~-~~~~i~~~------------~~- 256 (373)
T 2r5t_A 193 N--STTSTFCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRNTAE-MYDNILNK------------PL- 256 (373)
T ss_dssp C--CCCCSBSCCCCCCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCSBHHH-HHHHHHHS------------CC-
T ss_pred C--CccccccCCccccCHHHhCCCCCCchhhhHHHHHHHHHHHcCCCCCCCCCHHH-HHHHHHhc------------cc-
Confidence 2 22345679999999999999999999999999999999999999997532111 11111110 00
Q ss_pred CchhhhhHHHHHHHHHHHHHHHhccccCcCCCCCHH
Q 002021 916 SQEDIHFVAKEQCVSFVFNLAMECTMEFPKQRINAK 951 (979)
Q Consensus 916 ~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~ 951 (979)
..+..++..+.+++.+|++.||.+||++.
T Consensus 257 -------~~~~~~~~~~~~li~~lL~~dp~~R~~~~ 285 (373)
T 2r5t_A 257 -------QLKPNITNSARHLLEGLLQKDRTKRLGAK 285 (373)
T ss_dssp -------CCCSSSCHHHHHHHHHHTCSSGGGSTTTT
T ss_pred -------CCCCCCCHHHHHHHHHHcccCHHhCCCCC
Confidence 00123456689999999999999999985
No 207
>2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens}
Probab=100.00 E-value=1.2e-37 Score=340.56 Aligned_cols=252 Identities=25% Similarity=0.396 Sum_probs=200.0
Q ss_pred CCCCCCceeeeecceEEEEEE-cCCCcEEEEEEeccccccchhcHHHHHHHHHhcCCCCeeeEEEeeccCCeeEEEEEec
Q 002021 682 DGFSENNLIGRGGFGSVYKAS-LGDGMEVAVKVFTSQCGRAFKSFDVECEIMKSIRHRNLIKVISSCSNEEFKALVLEYM 760 (979)
Q Consensus 682 ~~~~~~~~lG~G~~g~Vy~~~-~~~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~E~~ 760 (979)
++|.....||+|+||.||+|. ..+++.||||++........+.+.+|+.+++.++||||+++++++.+.+..++||||+
T Consensus 22 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~ 101 (295)
T 2clq_A 22 DENGDRVVLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYLGSFSENGFIKIFMEQV 101 (295)
T ss_dssp CTTSSBCEEEECSSSEEEEEEETTTCCEEEEEEEECCCC---HHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEECC
T ss_pred cCCCCcEEEeecCcEEEEEEEECCCCeEEEEEEccCCchHHHHHHHHHHHHHHhCCCCCEeeEeeEEEeCCcEEEEEEeC
Confidence 445566799999999999995 5678999999997665555678899999999999999999999999999999999999
Q ss_pred CCCccceeeccCC--CCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCEEeCC-CCcEEEEeeccccccCCCCC
Q 002021 761 PHGSLEKYLYSSN--CILDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDD-NMVAHLSDFSIAKMLTGEDQ 837 (979)
Q Consensus 761 ~~g~L~~~l~~~~--~~l~~~~~~~i~~~ia~~L~~LH~~~~~~i~H~Dik~~NIll~~-~~~~kl~Dfg~~~~~~~~~~ 837 (979)
++++|.+++.... ..+++..+..++.|++.|++||| +++|+||||||+||+++. ++.+||+|||.+........
T Consensus 102 ~~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dl~p~Nil~~~~~~~~kl~Dfg~~~~~~~~~~ 178 (295)
T 2clq_A 102 PGGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLH---DNQIVHRDIKGDNVLINTYSGVLKISDFGTSKRLAGINP 178 (295)
T ss_dssp SEEEHHHHHHHTTCCCTTCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEEETTTCCEEECCTTTCEESCC---
T ss_pred CCCCHHHHHHhhccCCCccHHHHHHHHHHHHHHHHHHH---hCCEEccCCChhhEEEECCCCCEEEeecccccccCCCCC
Confidence 9999999987653 34678899999999999999999 899999999999999987 89999999999987643221
Q ss_pred cceecccccCCCCCCccccCCCC--CCCchhHHHHHHHHHHHHcCCCCCcccccCcchHhHhhhhhcCCccchhhccccc
Q 002021 838 SMIQTQTLATIGYMAPEYGREGR--VSANGDVYSFGIMLMETFTGKKPTDEIFNGEMTLKHWVNDWLPISTMEVVDANLL 915 (979)
Q Consensus 838 ~~~~~~~~gt~~y~aPE~~~~~~--~~~~~DvwslG~il~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 915 (979)
......||+.|+|||.+.++. ++.++||||||+++|||++|+.||............. . ...
T Consensus 179 --~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~-~-~~~------------ 242 (295)
T 2clq_A 179 --CTETFTGTLQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGKPPFYELGEPQAAMFKV-G-MFK------------ 242 (295)
T ss_dssp ----CCCCCCGGGCCHHHHHHGGGGCSHHHHHHHHHHHHHHHHHTSCTTGGGSSHHHHHHHH-H-HHC------------
T ss_pred --cccccCCCccccChhhhcCCCCCCCcHHHHHHHHHHHHHHHHCCCCccCCCchhHHHHhh-c-ccc------------
Confidence 123456899999999987643 7899999999999999999999996532221111100 0 000
Q ss_pred CchhhhhHHHHHHHHHHHHHHHhccccCcCCCCCHHHHHHH
Q 002021 916 SQEDIHFVAKEQCVSFVFNLAMECTMEFPKQRINAKEIVTK 956 (979)
Q Consensus 916 ~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~eil~~ 956 (979)
.....+..++.++.+++.+||+.||++||++.|+++|
T Consensus 243 ----~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~~ 279 (295)
T 2clq_A 243 ----VHPEIPESMSAEAKAFILKCFEPDPDKRACANDLLVD 279 (295)
T ss_dssp ----CCCCCCTTSCHHHHHHHHHTTCSSTTTSCCHHHHHTS
T ss_pred ----ccccccccCCHHHHHHHHHHccCChhhCCCHHHHhcC
Confidence 0000112345678999999999999999999999875
No 208
>3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} PDB: 3uib_A*
Probab=100.00 E-value=9.9e-38 Score=351.77 Aligned_cols=277 Identities=20% Similarity=0.226 Sum_probs=204.6
Q ss_pred ccHHHHHHhhCCCCCCceeeeecceEEEEEEcCCCcEEEEEEecccccc-----------chhcHHHHHHHHHhcCCCCe
Q 002021 672 FSYLELCRATDGFSENNLIGRGGFGSVYKASLGDGMEVAVKVFTSQCGR-----------AFKSFDVECEIMKSIRHRNL 740 (979)
Q Consensus 672 ~~~~~~~~~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~vAvK~~~~~~~~-----------~~~~~~~E~~~l~~l~h~ni 740 (979)
....++....++|+..+.||+|+||.||+|...+|+.||||++...... ..+.+.+|++++++++||||
T Consensus 12 ~~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i 91 (362)
T 3pg1_A 12 DLIAELHAMQSPYTVQRFISSGSYGAVCAGVDSEGIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLREIRLLNHFHHPNI 91 (362)
T ss_dssp HHHHHHHHTTCSCEEEEEEEEETTEEEEEEECTTSCEEEEEEECEECCTTSCEEGGGSHHHHHHHHHHHHHHHHCCCTTB
T ss_pred HHHHHHHHhccceEEeEEeccCCCEEEEEEECCCCCeEEEEeccccCCccchhhhhhhhhHHHHHHHHHHHHHhCCCcCc
Confidence 3456777888999999999999999999998778999999998643221 12668899999999999999
Q ss_pred eeEEEeec-----cCCeeEEEEEecCCCccceeeccCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCEEe
Q 002021 741 IKVISSCS-----NEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLL 815 (979)
Q Consensus 741 v~l~~~~~-----~~~~~~lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~i~H~Dik~~NIll 815 (979)
+++++++. .....++||||++ |+|.+++......+++..+..++.|++.||+||| +++|+||||||+||++
T Consensus 92 v~~~~~~~~~~~~~~~~~~lv~e~~~-~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH---~~~ivH~Dlkp~NIl~ 167 (362)
T 3pg1_A 92 LGLRDIFVHFEEPAMHKLYLVTELMR-TDLAQVIHDQRIVISPQHIQYFMYHILLGLHVLH---EAGVVHRDLHPGNILL 167 (362)
T ss_dssp CCCSEEEEECCTTTCCEEEEEEECCS-EEHHHHHHCTTSCCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEE
T ss_pred cceeeeEEeccCCCcceEEEEEccCC-CCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHH---HCcCEecCCChHHEEE
Confidence 99999883 3446899999997 6898888877778999999999999999999999 8999999999999999
Q ss_pred CCCCcEEEEeeccccccCCCCCcceecccccCCCCCCccccCC-CCCCCchhHHHHHHHHHHHHcCCCCCcccccCcchH
Q 002021 816 DDNMVAHLSDFSIAKMLTGEDQSMIQTQTLATIGYMAPEYGRE-GRVSANGDVYSFGIMLMETFTGKKPTDEIFNGEMTL 894 (979)
Q Consensus 816 ~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwslG~il~el~tg~~P~~~~~~~~~~~ 894 (979)
+.++.+||+|||++....... ......+|+.|+|||.+.+ ..++.++||||+||++|||++|+.||......+ ..
T Consensus 168 ~~~~~~kl~Dfg~~~~~~~~~---~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~-~~ 243 (362)
T 3pg1_A 168 ADNNDITICDFNLAREDTADA---NKTHYVTHRWYRAPELVMQFKGFTKLVDMWSAGCVMAEMFNRKALFRGSTFYN-QL 243 (362)
T ss_dssp CTTCCEEECCTTC------------------CGGGCCHHHHTTCTTCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHH-HH
T ss_pred cCCCCEEEEecCccccccccc---ccceecccceecCcHHhcCCCCCCcHhHHHhHHHHHHHHHhCCCCCCCCCHHH-HH
Confidence 999999999999997543222 2244578999999998876 678999999999999999999999997532111 11
Q ss_pred hHhhhhhcCCccc-----------hhhcccccCc-hhhhhHHHHHHHHHHHHHHHhccccCcCCCCCHHHHHHH
Q 002021 895 KHWVNDWLPISTM-----------EVVDANLLSQ-EDIHFVAKEQCVSFVFNLAMECTMEFPKQRINAKEIVTK 956 (979)
Q Consensus 895 ~~~~~~~~~~~~~-----------~~~~~~~~~~-~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~eil~~ 956 (979)
...+......... +......... ..........+++.+.+++.+|++.||++|||+.|+++|
T Consensus 244 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 317 (362)
T 3pg1_A 244 NKIVEVVGTPKIEDVVMFSSPSARDYLRNSLSNVPARAWTAVVPTADPVALDLIAKMLEFNPQRRISTEQALRH 317 (362)
T ss_dssp HHHHHHHCCCCHHHHHHTSCHHHHHHTTTCCCCCCCCCHHHHSTTSCHHHHHHHHHHTCSSGGGSCCHHHHHTS
T ss_pred HHHHHHcCCCChHHhhhccchhhhHHHHhhcccCChhhHHhhCCCCCHHHHHHHHHHhcCChhhCCCHHHHHcC
Confidence 1111111000000 0000000000 001111223456779999999999999999999999986
No 209
>2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A
Probab=100.00 E-value=8.2e-38 Score=351.89 Aligned_cols=258 Identities=26% Similarity=0.357 Sum_probs=206.9
Q ss_pred HHHHHhhCCCCCCceeeeecceEEEEEEc-CCCcEEEEEEecccccc--------chhcHHHHHHHHHhc-CCCCeeeEE
Q 002021 675 LELCRATDGFSENNLIGRGGFGSVYKASL-GDGMEVAVKVFTSQCGR--------AFKSFDVECEIMKSI-RHRNLIKVI 744 (979)
Q Consensus 675 ~~~~~~~~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vAvK~~~~~~~~--------~~~~~~~E~~~l~~l-~h~niv~l~ 744 (979)
.......++|+..+.||+|+||.||+|.. .+|+.||||++...... ..+.+.+|+++++++ +||||++++
T Consensus 87 ~~~~~~~~~y~~~~~lg~G~~g~Vy~a~~~~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~ 166 (365)
T 2y7j_A 87 AAAKEFYQKYDPKDVIGRGVSSVVRRCVHRATGHEFAVKIMEVTAERLSPEQLEEVREATRRETHILRQVAGHPHIITLI 166 (365)
T ss_dssp HHHHHHHHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEETTSSCCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEE
T ss_pred hhhhhhhhhcccceEEecCCCEEEEEEEECCCCcEEEEEEEEccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeEEE
Confidence 33444556799999999999999999965 47999999998654321 135678899999999 799999999
Q ss_pred EeeccCCeeEEEEEecCCCccceeeccCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCEEeCCCCcEEEE
Q 002021 745 SSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLS 824 (979)
Q Consensus 745 ~~~~~~~~~~lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~i~H~Dik~~NIll~~~~~~kl~ 824 (979)
+++...+..++||||+++++|.+++... ..+++..+..++.||+.||+||| +.+|+||||||+||+++.++.+||+
T Consensus 167 ~~~~~~~~~~lv~e~~~g~~L~~~l~~~-~~l~~~~~~~i~~qi~~~L~~LH---~~gi~H~Dlkp~NIl~~~~~~ikl~ 242 (365)
T 2y7j_A 167 DSYESSSFMFLVFDLMRKGELFDYLTEK-VALSEKETRSIMRSLLEAVSFLH---ANNIVHRDLKPENILLDDNMQIRLS 242 (365)
T ss_dssp EEEEBSSEEEEEECCCTTCBHHHHHHHH-SSCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECTTCCEEEC
T ss_pred EEEeeCCEEEEEEEeCCCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCHHHEEECCCCCEEEE
Confidence 9999999999999999999999998754 36899999999999999999999 8999999999999999999999999
Q ss_pred eeccccccCCCCCcceecccccCCCCCCccccCC------CCCCCchhHHHHHHHHHHHHcCCCCCcccccCcchHhHhh
Q 002021 825 DFSIAKMLTGEDQSMIQTQTLATIGYMAPEYGRE------GRVSANGDVYSFGIMLMETFTGKKPTDEIFNGEMTLKHWV 898 (979)
Q Consensus 825 Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~------~~~~~~~DvwslG~il~el~tg~~P~~~~~~~~~~~~~~~ 898 (979)
|||++........ .....||+.|+|||++.+ ..++.++|||||||++|||++|+.||...... .....+
T Consensus 243 DfG~~~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~~--~~~~~i 317 (365)
T 2y7j_A 243 DFGFSCHLEPGEK---LRELCGTPGYLAPEILKCSMDETHPGYGKEVDLWACGVILFTLLAGSPPFWHRRQI--LMLRMI 317 (365)
T ss_dssp CCTTCEECCTTCC---BCCCCSCGGGCCHHHHHHTTCTTSCCBCTTHHHHHHHHHHHHHHHSSCSSCCSSHH--HHHHHH
T ss_pred ecCcccccCCCcc---cccCCCCCCccChhhccccccccCcCCCchhhHHhHHHHHHHHHHCCCCCCCCCHH--HHHHHH
Confidence 9999987643322 244678999999998753 35889999999999999999999999652111 111110
Q ss_pred hhhcCCccchhhcccccCchhhhhHHHHHHHHHHHHHHHhccccCcCCCCCHHHHHHH
Q 002021 899 NDWLPISTMEVVDANLLSQEDIHFVAKEQCVSFVFNLAMECTMEFPKQRINAKEIVTK 956 (979)
Q Consensus 899 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~eil~~ 956 (979)
... ......+.+..++..+.+++.+|++.||++|||+.|+++|
T Consensus 318 ~~~---------------~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~ell~h 360 (365)
T 2y7j_A 318 MEG---------------QYQFSSPEWDDRSSTVKDLISRLLQVDPEARLTAEQALQH 360 (365)
T ss_dssp HHT---------------CCCCCHHHHSSSCHHHHHHHHHHSCSSTTTSCCHHHHHHS
T ss_pred HhC---------------CCCCCCcccccCCHHHHHHHHHHcCCChhHCcCHHHHhcC
Confidence 000 0001112223456679999999999999999999999875
No 210
>3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii}
Probab=100.00 E-value=6.4e-38 Score=364.64 Aligned_cols=196 Identities=24% Similarity=0.345 Sum_probs=154.1
Q ss_pred hCCCCCCceeeeecceEEEEEE-cCCCcEEEEEEeccccc--cchhcHHHHHHHHHhcCCCCeeeEEEeecc-----CCe
Q 002021 681 TDGFSENNLIGRGGFGSVYKAS-LGDGMEVAVKVFTSQCG--RAFKSFDVECEIMKSIRHRNLIKVISSCSN-----EEF 752 (979)
Q Consensus 681 ~~~~~~~~~lG~G~~g~Vy~~~-~~~~~~vAvK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~~~~~~-----~~~ 752 (979)
.++|+..+.||+|+||.||+|. ..+++.||||++..... ...+.+.+|+++++.++||||+++++++.. ...
T Consensus 52 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~ 131 (458)
T 3rp9_A 52 PDRYEIRHLIGTGSYGHVCEAYDKLEKRVVAIKKILRVFEDLIDCKRILREIAILNRLNHDHVVKVLDIVIPKDVEKFDE 131 (458)
T ss_dssp CTTEEECCC-------CEEEEEECC--CEEEEEEECSTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCTTTCCC
T ss_pred CCCeEEeeEeeecCCeEEEEEEECCCCcEEEEEEechhhcCHHHHHHHHHHHHHHHhCCCCCCCceEEEEecCCcccCce
Confidence 3679999999999999999994 45789999999865422 234678899999999999999999999843 357
Q ss_pred eEEEEEecCCCccceeeccCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCEEeCCCCcEEEEeecccccc
Q 002021 753 KALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFSIAKML 832 (979)
Q Consensus 753 ~~lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~i~H~Dik~~NIll~~~~~~kl~Dfg~~~~~ 832 (979)
.|+||||++ ++|.+++... ..+++..++.++.||+.||+||| +++|+||||||+|||++.++.+||+|||+++..
T Consensus 132 ~~lv~e~~~-~~L~~~~~~~-~~l~~~~~~~~~~qi~~aL~~LH---~~~iiHrDlKp~NILl~~~~~~kl~DFGla~~~ 206 (458)
T 3rp9_A 132 LYVVLEIAD-SDFKKLFRTP-VYLTELHIKTLLYNLLVGVKYVH---SAGILHRDLKPANCLVNQDCSVKVCDFGLARTV 206 (458)
T ss_dssp EEEEECCCS-EEHHHHHHSS-CCCCHHHHHHHHHHHHHHHHHHH---HTTCBCCCCCGGGEEECTTCCEEECCCTTCBCT
T ss_pred EEEEEeccc-cchhhhcccC-CCCCHHHHHHHHHHHHHHHHHHH---hCCcCCCCCChhhEEECCCCCEeecccccchhc
Confidence 899999984 6898888664 46999999999999999999999 999999999999999999999999999999876
Q ss_pred CCCCCc-------------------------ceecccccCCCCCCcccc-CCCCCCCchhHHHHHHHHHHHHcCC
Q 002021 833 TGEDQS-------------------------MIQTQTLATIGYMAPEYG-REGRVSANGDVYSFGIMLMETFTGK 881 (979)
Q Consensus 833 ~~~~~~-------------------------~~~~~~~gt~~y~aPE~~-~~~~~~~~~DvwslG~il~el~tg~ 881 (979)
...... ......+||+.|+|||++ ....++.++||||+||++|||++|.
T Consensus 207 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~DiwSlG~il~elltg~ 281 (458)
T 3rp9_A 207 DYPENGNSQLPISPREDDMNLVTFPHTKNLKRQLTGHVVTRWYRAPELILLQENYTEAIDVWSIGCIFAELLNMI 281 (458)
T ss_dssp TSCTTCCCCCC---------------------------CCCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHTTS
T ss_pred cCccccccccccCccccccccccccccccccccccCCcccccccChHHhhCCCCCCcHhHHHHHHHHHHHHHHhc
Confidence 422211 123445789999999975 5567999999999999999999943
No 211
>3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens}
Probab=100.00 E-value=6.2e-38 Score=349.77 Aligned_cols=260 Identities=23% Similarity=0.289 Sum_probs=192.3
Q ss_pred CCCCCCceeeeecceEEEEEE-cCCCcEEEEEEeccccccchhcHHHHHHHHHhcC-CCCeeeEEEee--------ccCC
Q 002021 682 DGFSENNLIGRGGFGSVYKAS-LGDGMEVAVKVFTSQCGRAFKSFDVECEIMKSIR-HRNLIKVISSC--------SNEE 751 (979)
Q Consensus 682 ~~~~~~~~lG~G~~g~Vy~~~-~~~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~l~~~~--------~~~~ 751 (979)
.+|+..+.||+|+||.||+|. ..+++.||||++........+.+.+|+.+++++. ||||+++++++ ....
T Consensus 28 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~~h~~iv~~~~~~~~~~~~~~~~~~ 107 (337)
T 3ll6_A 28 LRLRVRRVLAEGGFAFVYEAQDVGSGREYALKRLLSNEEEKNRAIIQEVCFMKKLSGHPNIVQFCSAASIGKEESDTGQA 107 (337)
T ss_dssp EEEEEEEEEECCSSEEEEEEEETTTCCEEEEEEEEESSHHHHHHHHHHHHHHHHHTTSTTBCCEEEEEEECTTTSTTSSE
T ss_pred ceEEEEEEEccCCceEEEEEEECCCCcEEEEEEecCCchHHHHHHHHHHHHHHHhccCCChhhccccccccccccccCCc
Confidence 568889999999999999996 4578999999986655555677889999999996 99999999998 3455
Q ss_pred eeEEEEEecCCCccceeecc--CCCCCCHHHHHHHHHHHHHHHHHHhcCCCCC--eEecCCCCCCEEeCCCCcEEEEeec
Q 002021 752 FKALVLEYMPHGSLEKYLYS--SNCILDIFQRLNIMIDVASALEYLHFGYSAP--VIHCDLKPSNVLLDDNMVAHLSDFS 827 (979)
Q Consensus 752 ~~~lv~E~~~~g~L~~~l~~--~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~--i~H~Dik~~NIll~~~~~~kl~Dfg 827 (979)
..++||||++ |+|.+++.. ....+++.+++.++.|++.||+||| +++ |+||||||+||+++.++.+||+|||
T Consensus 108 ~~~lv~e~~~-g~L~~~l~~~~~~~~~~~~~~~~i~~qi~~~l~~LH---~~~~~ivH~Dikp~NIl~~~~~~~kl~Dfg 183 (337)
T 3ll6_A 108 EFLLLTELCK-GQLVEFLKKMESRGPLSCDTVLKIFYQTCRAVQHMH---RQKPPIIHRDLKVENLLLSNQGTIKLCDFG 183 (337)
T ss_dssp EEEEEEECCS-EEHHHHHHHHHTTCSCCHHHHHHHHHHHHHHHHHHH---TSSSCCBCCCCCGGGCEECTTSCEEBCCCT
T ss_pred eEEEEEEecC-CCHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHH---hCCCCEEEccCCcccEEECCCCCEEEecCc
Confidence 6899999996 699988865 3456999999999999999999999 888 9999999999999999999999999
Q ss_pred cccccCCCCCcc----------eecccccCCCCCCcccc---CCCCCCCchhHHHHHHHHHHHHcCCCCCcccccCcchH
Q 002021 828 IAKMLTGEDQSM----------IQTQTLATIGYMAPEYG---REGRVSANGDVYSFGIMLMETFTGKKPTDEIFNGEMTL 894 (979)
Q Consensus 828 ~~~~~~~~~~~~----------~~~~~~gt~~y~aPE~~---~~~~~~~~~DvwslG~il~el~tg~~P~~~~~~~~~~~ 894 (979)
++.......... ......+|+.|+|||++ .+..+++++||||||+++|||++|+.||........
T Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~-- 261 (337)
T 3ll6_A 184 SATTISHYPDYSWSAQRRALVEEEITRNTTPMYRTPEIIDLYSNFPIGEKQDIWALGCILYLLCFRQHPFEDGAKLRI-- 261 (337)
T ss_dssp TCBCCSSCC-------------------------------CCTTSCSSHHHHHHHHHHHHHHHHHSSCCC----------
T ss_pred cceeccccCcccccccccccchhhccccCCCCcCChhhhhccccCCCChHHhHHHHHHHHHHHHhCCCCCcchhHHHh--
Confidence 998764332211 11244589999999988 566788999999999999999999999865221110
Q ss_pred hHhhhhhcCCccchhhcccccCchhhhhHHHHHHHHHHHHHHHhccccCcCCCCCHHHHHHHHHHhHHhhccCC
Q 002021 895 KHWVNDWLPISTMEVVDANLLSQEDIHFVAKEQCVSFVFNLAMECTMEFPKQRINAKEIVTKLLKIRDSLLRNV 968 (979)
Q Consensus 895 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~eil~~L~~~~~~~~~~~ 968 (979)
...... ......++..+.+++.+||+.||++|||+.|++++|+++........
T Consensus 262 ---~~~~~~------------------~~~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~l~~~~~~~~~~~ 314 (337)
T 3ll6_A 262 ---VNGKYS------------------IPPHDTQYTVFHSLIRAMLQVNPEERLSIAEVVHQLQEIAAARNVNP 314 (337)
T ss_dssp -------CC------------------CCTTCCSSGGGHHHHHHHSCSSGGGSCCHHHHHHHHHHHHHHTTCCT
T ss_pred ---hcCccc------------------CCcccccchHHHHHHHHHccCChhhCcCHHHHHHHHHHHHhccCCCC
Confidence 000000 00011223347889999999999999999999999999987654443
No 212
>3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B
Probab=100.00 E-value=1.1e-37 Score=364.20 Aligned_cols=253 Identities=23% Similarity=0.313 Sum_probs=205.2
Q ss_pred CCCCCCceeeeecceEEEEEEc-CCCcEEEEEEecccc---ccchhcHHHHHHHHHhcCCCCeeeEEEeeccCCeeEEEE
Q 002021 682 DGFSENNLIGRGGFGSVYKASL-GDGMEVAVKVFTSQC---GRAFKSFDVECEIMKSIRHRNLIKVISSCSNEEFKALVL 757 (979)
Q Consensus 682 ~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vAvK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 757 (979)
++|+..+.||+|+||.||+|+. .+|+.||||++.... ....+.+.+|+++++.++||||+++++++.+.+..|+||
T Consensus 185 ~~f~~~~~LG~G~fG~Vy~a~~~~tg~~vAiK~l~k~~~~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~~~~~l~lVm 264 (543)
T 3c4z_A 185 DWFLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSLAYAFETKTDLCLVM 264 (543)
T ss_dssp GGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred hheEEEEEEeeCCCeEEEEEEECCCCcEEEEEEEEhHHhhhhHHHHHHHHHHHHHHhcCCCCEeeEEEEEeeCCEEEEEE
Confidence 5688889999999999999965 579999999996542 233466888999999999999999999999999999999
Q ss_pred EecCCCccceeeccC---CCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCEEeCCCCcEEEEeeccccccCC
Q 002021 758 EYMPHGSLEKYLYSS---NCILDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFSIAKMLTG 834 (979)
Q Consensus 758 E~~~~g~L~~~l~~~---~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~i~H~Dik~~NIll~~~~~~kl~Dfg~~~~~~~ 834 (979)
||++||+|.+++... ...+++..++.++.||+.||+||| +++|+||||||+||+++.++.+||+|||+++....
T Consensus 265 E~~~gg~L~~~l~~~~~~~~~l~e~~~~~~~~qi~~aL~~LH---~~gIvHrDLKP~NILl~~~g~vkL~DFGla~~~~~ 341 (543)
T 3c4z_A 265 TIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLH---QRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKA 341 (543)
T ss_dssp CCCTTCBHHHHHHTSSTTSCSCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEECTTSCEEECCCTTCEECCT
T ss_pred EeccCCCHHHHHHHhhcccccccHHHHHHHHHHHHHHHHHHH---HcCCcccCCChHHEEEeCCCCEEEeecceeeeccC
Confidence 999999999988654 346999999999999999999999 99999999999999999999999999999987643
Q ss_pred CCCcceecccccCCCCCCccccCCCCCCCchhHHHHHHHHHHHHcCCCCCcccccCcchHhHhhhhhcCCccchhhcccc
Q 002021 835 EDQSMIQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFTGKKPTDEIFNGEMTLKHWVNDWLPISTMEVVDANL 914 (979)
Q Consensus 835 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 914 (979)
... .....+||+.|+|||++.+..++.++||||+||++|||++|+.||........ ........ ....
T Consensus 342 ~~~--~~~~~~GT~~Y~APE~l~~~~~~~~~DiwSlGvilyelltG~~PF~~~~~~~~-~~~~~~~i--------~~~~- 409 (543)
T 3c4z_A 342 GQT--KTKGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVE-NKELKQRV--------LEQA- 409 (543)
T ss_dssp TCC--CBCCCCSCTTTSCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCTTCCCC-HHHHHHHH--------HHCC-
T ss_pred CCc--ccccccCCccccChhhhcCCCCChHHhcCcchHHHHHHHhCCCCCCCCccchh-HHHHHHHH--------hhcc-
Confidence 322 12345799999999999998999999999999999999999999976422111 11111000 0000
Q ss_pred cCchhhhhHHHHHHHHHHHHHHHhccccCcCCCCCH-----HHHHHH
Q 002021 915 LSQEDIHFVAKEQCVSFVFNLAMECTMEFPKQRINA-----KEIVTK 956 (979)
Q Consensus 915 ~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~-----~eil~~ 956 (979)
...+..++.++.+++.+|++.||++||++ +|+++|
T Consensus 410 -------~~~p~~~s~~~~~li~~lL~~dP~~R~~~~~~~a~ei~~H 449 (543)
T 3c4z_A 410 -------VTYPDKFSPASKDFCEALLQKDPEKRLGFRDGSCDGLRTH 449 (543)
T ss_dssp -------CCCCTTSCHHHHHHHHHHSCSSGGGSCCCBTTBSHHHHTS
T ss_pred -------cCCCcccCHHHHHHHHHhccCCHhHCCCCcccCHHHHHcC
Confidence 00112445678999999999999999965 677764
No 213
>2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X*
Probab=100.00 E-value=1.3e-37 Score=348.96 Aligned_cols=265 Identities=19% Similarity=0.284 Sum_probs=206.9
Q ss_pred hCCCCCCceeeeecceEEEEEEcCCCcEEEEEEeccccccc---h--------------hcHHHHHHHHHhcCCCCeeeE
Q 002021 681 TDGFSENNLIGRGGFGSVYKASLGDGMEVAVKVFTSQCGRA---F--------------KSFDVECEIMKSIRHRNLIKV 743 (979)
Q Consensus 681 ~~~~~~~~~lG~G~~g~Vy~~~~~~~~~vAvK~~~~~~~~~---~--------------~~~~~E~~~l~~l~h~niv~l 743 (979)
.++|+..+.||+|+||.||+|.. +|+.||||++....... . +.+.+|++++++++||||+++
T Consensus 30 ~~~y~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~ 108 (348)
T 2pml_X 30 INDYRIIRTLNQGKFNKIILCEK-DNKFYALKKYEKSLLEKKRDFTKSNNDKISIKSKYDDFKNELQIITDIKNEYCLTC 108 (348)
T ss_dssp ETTEEEEEEEECCSSCCEEEEEE-TTEEEEEEEEEHHHHSSCEEECCCSSSSCCEEEHHHHHHHHHHHHTTCCCTTBCCC
T ss_pred cCceEEEEEEcCCCCeEEEEEEc-CCceEEEEEeecccccchhhhccccchhhhHHhHHHHHHHHHHHHHhCCCCCcceE
Confidence 36789999999999999999988 89999999986542111 1 778999999999999999999
Q ss_pred EEeeccCCeeEEEEEecCCCcccee------eccC-CCCCCHHHHHHHHHHHHHHHHHHhcCCC-CCeEecCCCCCCEEe
Q 002021 744 ISSCSNEEFKALVLEYMPHGSLEKY------LYSS-NCILDIFQRLNIMIDVASALEYLHFGYS-APVIHCDLKPSNVLL 815 (979)
Q Consensus 744 ~~~~~~~~~~~lv~E~~~~g~L~~~------l~~~-~~~l~~~~~~~i~~~ia~~L~~LH~~~~-~~i~H~Dik~~NIll 815 (979)
++++.+.+..++||||+++|+|.++ +... ...+++..++.++.|++.|++||| + ++|+||||||+||++
T Consensus 109 ~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH---~~~~i~H~dl~p~Nil~ 185 (348)
T 2pml_X 109 EGIITNYDEVYIIYEYMENDSILKFDEYFFVLDKNYTCFIPIQVIKCIIKSVLNSFSYIH---NEKNICHRDVKPSNILM 185 (348)
T ss_dssp SEEEESSSEEEEEEECCTTCBSSEESSSEESSCSSSCCCCCHHHHHHHHHHHHHHHHHHH---HTSCEECCCCCGGGEEE
T ss_pred EEEEeeCCeEEEEEeccCCCcHHHHHHHhhhhhhccccCCCHHHHHHHHHHHHHHHHHHh---ccCCEeecCCChHhEEE
Confidence 9999999999999999999999999 6543 457999999999999999999999 7 999999999999999
Q ss_pred CCCCcEEEEeeccccccCCCCCcceecccccCCCCCCccccCCC-CCCC-chhHHHHHHHHHHHHcCCCCCcccccCcch
Q 002021 816 DDNMVAHLSDFSIAKMLTGEDQSMIQTQTLATIGYMAPEYGREG-RVSA-NGDVYSFGIMLMETFTGKKPTDEIFNGEMT 893 (979)
Q Consensus 816 ~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~-~~DvwslG~il~el~tg~~P~~~~~~~~~~ 893 (979)
+.++.+||+|||.+...... ......+|+.|+|||.+.+. .++. ++||||+|+++|||++|+.||.........
T Consensus 186 ~~~~~~kl~dfg~~~~~~~~----~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~ 261 (348)
T 2pml_X 186 DKNGRVKLSDFGESEYMVDK----KIKGSRGTYEFMPPEFFSNESSYNGAKVDIWSLGICLYVMFYNVVPFSLKISLVEL 261 (348)
T ss_dssp CTTSCEEECCCTTCEECBTT----EECSSCSCGGGCCGGGGSSCCCEEHHHHHHHHHHHHHHHHHHSSCSSCCSSCSHHH
T ss_pred cCCCcEEEeccccccccccc----cccCCCCCcCccCchhhcCCCCCCcchhhHHHHHHHHHHHHhCCCCCCCCCcHHHH
Confidence 99999999999999875432 23456789999999999877 5666 999999999999999999999764332222
Q ss_pred HhHhhhhhcCCcc--chhhcccccCchhhhhHHHHHHHHHHHHHHHhccccCcCCCCCHHHHHHH
Q 002021 894 LKHWVNDWLPIST--MEVVDANLLSQEDIHFVAKEQCVSFVFNLAMECTMEFPKQRINAKEIVTK 956 (979)
Q Consensus 894 ~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~eil~~ 956 (979)
............. ...... .. ..........++..+.+++.+||+.||++|||+.|+++|
T Consensus 262 ~~~i~~~~~~~~~~~~~~~~~-~~--~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rps~~e~l~h 323 (348)
T 2pml_X 262 FNNIRTKNIEYPLDRNHFLYP-LT--NKKSTCSNNFLSNEDIDFLKLFLRKNPAERITSEDALKH 323 (348)
T ss_dssp HHHHTSCCCCCCCSSSSSTTT-TC--C--------CCCHHHHHHHHHHCCSSGGGSCCHHHHHTS
T ss_pred HHHHhccCcCCccchhhhhcc-cc--ccccccchhhcCHHHHHHHHHHccCChhhCCCHHHHhcC
Confidence 2221111111100 000000 00 000011123456779999999999999999999999985
No 214
>3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} SCOP: d.144.1.7 PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3u9c_A* 4fbx_A* 3mb7_A* 3mb6_A* ...
Probab=100.00 E-value=1.1e-37 Score=346.85 Aligned_cols=262 Identities=19% Similarity=0.275 Sum_probs=201.3
Q ss_pred CCCCCCceeeeecceEEEEEE-cCCCcEEEEEEeccccccchhcHHHHHHHHHhcC-CCCeeeEEEeecc--CCeeEEEE
Q 002021 682 DGFSENNLIGRGGFGSVYKAS-LGDGMEVAVKVFTSQCGRAFKSFDVECEIMKSIR-HRNLIKVISSCSN--EEFKALVL 757 (979)
Q Consensus 682 ~~~~~~~~lG~G~~g~Vy~~~-~~~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~--~~~~~lv~ 757 (979)
++|+..+.||+|+||.||+|. ..+++.||||++... ..+.+.+|++++++++ ||||+++++++.+ ....++||
T Consensus 36 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~---~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~~~lv~ 112 (330)
T 3nsz_A 36 DDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPV---KKKKIKREIKILENLRGGPNIITLADIVKDPVSRTPALVF 112 (330)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECSC---CHHHHHHHHHHHHHHTTSTTBCCEEEEEECTTTCCEEEEE
T ss_pred CceEEEEEecccCCeEEEEEEECCCCcEEEEEEeccc---chHHHHHHHHHHHHcCCCCCEEEeeeeeccCCCCceEEEE
Confidence 568889999999999999994 568999999998643 3467889999999997 9999999999987 66789999
Q ss_pred EecCCCccceeeccCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCEEeCCCC-cEEEEeeccccccCCCC
Q 002021 758 EYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNM-VAHLSDFSIAKMLTGED 836 (979)
Q Consensus 758 E~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~i~H~Dik~~NIll~~~~-~~kl~Dfg~~~~~~~~~ 836 (979)
||+++++|.+++.. +++.+++.++.|++.||+||| +++|+||||||+||+++.++ .+||+|||+++......
T Consensus 113 e~~~~~~l~~~~~~----~~~~~~~~~~~qi~~~l~~lH---~~~ivH~Dikp~Nil~~~~~~~~kl~Dfg~a~~~~~~~ 185 (330)
T 3nsz_A 113 EHVNNTDFKQLYQT----LTDYDIRFYMYEILKALDYCH---SMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQ 185 (330)
T ss_dssp ECCCCCCHHHHGGG----CCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEEETTTTEEEECCCTTCEECCTTC
T ss_pred eccCchhHHHHHHh----CCHHHHHHHHHHHHHHHHHHH---hCCeeeCCCCHHHEEEcCCCCEEEEEeCCCceEcCCCC
Confidence 99999999988753 889999999999999999999 99999999999999999776 89999999998764332
Q ss_pred CcceecccccCCCCCCccccCC-CCCCCchhHHHHHHHHHHHHcCCCCCcccccCcchHhHhhhhhcCCccc--------
Q 002021 837 QSMIQTQTLATIGYMAPEYGRE-GRVSANGDVYSFGIMLMETFTGKKPTDEIFNGEMTLKHWVNDWLPISTM-------- 907 (979)
Q Consensus 837 ~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwslG~il~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~-------- 907 (979)
. .....+|..|+|||.+.+ ..++.++||||+||++|||++|+.||.......................
T Consensus 186 ~---~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 262 (330)
T 3nsz_A 186 E---YNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNI 262 (330)
T ss_dssp C---CCSCCSCGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHTCSSSSCCSSHHHHHHHHHHHHCHHHHHHHHHHTTC
T ss_pred c---cccccccccccChhhhcCCCcCCchhhHHHHHHHHHHHHhCCCCcccCCchHHHHHHHHHhcCCchhhhHHHHhcc
Confidence 2 244578999999999876 6789999999999999999999999954322211111111100000000
Q ss_pred -------hhhcccccCc--hhhhhHHHHHHHHHHHHHHHhccccCcCCCCCHHHHHHH
Q 002021 908 -------EVVDANLLSQ--EDIHFVAKEQCVSFVFNLAMECTMEFPKQRINAKEIVTK 956 (979)
Q Consensus 908 -------~~~~~~~~~~--~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~eil~~ 956 (979)
+......... ..........+++++.+++.+|++.||++|||++|+++|
T Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpta~e~l~h 320 (330)
T 3nsz_A 263 ELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEH 320 (330)
T ss_dssp CCCTHHHHHHCCCCCCCGGGGCCTTTGGGCCHHHHHHHHTTSCSSGGGSCCHHHHHTS
T ss_pred ccccchhhhhhhccccchhhhccccccccCCHHHHHHHHHHhcCCcccCCCHHHHhcC
Confidence 0000000000 000011122356789999999999999999999999986
No 215
>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} PDB: 3fpq_A
Probab=100.00 E-value=1.6e-37 Score=338.65 Aligned_cols=247 Identities=23% Similarity=0.358 Sum_probs=197.6
Q ss_pred CCCCCceeeeecceEEEEEE-cCCCcEEEEEEecccc--ccchhcHHHHHHHHHhcCCCCeeeEEEeecc----CCeeEE
Q 002021 683 GFSENNLIGRGGFGSVYKAS-LGDGMEVAVKVFTSQC--GRAFKSFDVECEIMKSIRHRNLIKVISSCSN----EEFKAL 755 (979)
Q Consensus 683 ~~~~~~~lG~G~~g~Vy~~~-~~~~~~vAvK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~----~~~~~l 755 (979)
.|...+.||+|+||.||+|. ..++..||+|++.... ....+.+.+|+++++.++||||+++++++.. ....++
T Consensus 27 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~va~k~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~l 106 (290)
T 1t4h_A 27 FLKFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIVL 106 (290)
T ss_dssp EEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEESSSCEEEEE
T ss_pred eEEeeeeccCCCCeEEEEeEecCCceEEEEEEecchhhCHHHHHHHHHHHHHHHhCCCCCeeeeeeeeccccCCCceEEE
Confidence 36677889999999999995 4678899999986542 2345678899999999999999999998754 466899
Q ss_pred EEEecCCCccceeeccCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCC--eEecCCCCCCEEeC-CCCcEEEEeecccccc
Q 002021 756 VLEYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGYSAP--VIHCDLKPSNVLLD-DNMVAHLSDFSIAKML 832 (979)
Q Consensus 756 v~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~--i~H~Dik~~NIll~-~~~~~kl~Dfg~~~~~ 832 (979)
||||+++|+|.+++... ..+++..++.++.|++.||+||| +++ |+||||||+||+++ +++.+||+|||++...
T Consensus 107 v~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~qi~~~l~~lH---~~~~~i~H~dikp~Nil~~~~~~~~kl~Dfg~~~~~ 182 (290)
T 1t4h_A 107 VTELMTSGTLKTYLKRF-KVMKIKVLRSWCRQILKGLQFLH---TRTPPIIHRDLKCDNIFITGPTGSVKIGDLGLATLK 182 (290)
T ss_dssp EEECCCSCBHHHHHHHH-SSCCHHHHHHHHHHHHHHHHHHH---TSSSCCCCSCCCGGGEEESSTTSCEEECCTTGGGGC
T ss_pred EEEecCCCCHHHHHHHc-cCCCHHHHHHHHHHHHHHHHHHH---cCCCCEEECCCCHHHEEEECCCCCEEEeeCCCcccc
Confidence 99999999999999764 35899999999999999999999 888 99999999999998 8899999999999764
Q ss_pred CCCCCcceecccccCCCCCCccccCCCCCCCchhHHHHHHHHHHHHcCCCCCcccccCcchHhHhhhhhcCCccchhhcc
Q 002021 833 TGEDQSMIQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFTGKKPTDEIFNGEMTLKHWVNDWLPISTMEVVDA 912 (979)
Q Consensus 833 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 912 (979)
.... .....||+.|+|||.+. +.++.++||||+|+++|+|++|+.||..................+
T Consensus 183 ~~~~----~~~~~~t~~y~aPE~~~-~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~--------- 248 (290)
T 1t4h_A 183 RASF----AKAVIGTPEFMAPEMYE-EKYDESVDVYAFGMCMLEMATSEYPYSECQNAAQIYRRVTSGVKP--------- 248 (290)
T ss_dssp CTTS----BEESCSSCCCCCGGGGG-TCCCTHHHHHHHHHHHHHHHHSSCTTTTCSSHHHHHHHHTTTCCC---------
T ss_pred cccc----cccccCCcCcCCHHHHh-ccCCCcchHHHHHHHHHHHHhCCCCCCCcCcHHHHHHHHhccCCc---------
Confidence 3222 23456899999999876 458999999999999999999999996533222111111100000
Q ss_pred cccCchhhhhHHHHHHHHHHHHHHHhccccCcCCCCCHHHHHHH
Q 002021 913 NLLSQEDIHFVAKEQCVSFVFNLAMECTMEFPKQRINAKEIVTK 956 (979)
Q Consensus 913 ~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~eil~~ 956 (979)
...+..+++++.+++.+||+.||.+|||+.|+++|
T Consensus 249 ---------~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~h 283 (290)
T 1t4h_A 249 ---------ASFDKVAIPEVKEIIEGCIRQNKDERYSIKDLLNH 283 (290)
T ss_dssp ---------GGGGGCCCHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred ---------cccCCCCCHHHHHHHHHHccCChhhCCCHHHHhhC
Confidence 01112234568999999999999999999999875
No 216
>2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ...
Probab=100.00 E-value=5.5e-38 Score=341.15 Aligned_cols=246 Identities=25% Similarity=0.343 Sum_probs=203.9
Q ss_pred CCCCCCceeeeecceEEEEEEc-CCCcEEEEEEecccc---ccchhcHHHHHHHHHhcCCCCeeeEEEeeccCCeeEEEE
Q 002021 682 DGFSENNLIGRGGFGSVYKASL-GDGMEVAVKVFTSQC---GRAFKSFDVECEIMKSIRHRNLIKVISSCSNEEFKALVL 757 (979)
Q Consensus 682 ~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vAvK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 757 (979)
++|+..+.||+|+||.||+|.. .+++.||||++.... ....+.+.+|+++++.++||||+++++++.+.+..++||
T Consensus 14 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 93 (284)
T 2vgo_A 14 DDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRMYNYFHDRKRIYLML 93 (284)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred hhceeeheecCCCCeEEEEEEEcCCCcEEEEEEEcccccchHHHHHHHHHHHHHHhcCCCCCEeeEEEEEEcCCEEEEEE
Confidence 6788899999999999999954 468899999986432 223467889999999999999999999999999999999
Q ss_pred EecCCCccceeeccCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCEEeCCCCcEEEEeeccccccCCCCC
Q 002021 758 EYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFSIAKMLTGEDQ 837 (979)
Q Consensus 758 E~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~i~H~Dik~~NIll~~~~~~kl~Dfg~~~~~~~~~~ 837 (979)
||+++|+|.+++...+ .+++..++.++.|++.|++||| +++|+||||||+||+++.++.+||+|||++.......
T Consensus 94 e~~~~~~L~~~l~~~~-~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dl~p~Nil~~~~~~~kl~Dfg~~~~~~~~~- 168 (284)
T 2vgo_A 94 EFAPRGELYKELQKHG-RFDEQRSATFMEELADALHYCH---ERKVIHRDIKPENLLMGYKGELKIADFGWSVHAPSLR- 168 (284)
T ss_dssp CCCTTEEHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHH---TTTEECCCCSGGGEEECTTCCEEECCCTTCEECSSSC-
T ss_pred EeCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---HCCceecCCCHHHEEEcCCCCEEEecccccccCcccc-
Confidence 9999999999987653 5899999999999999999999 9999999999999999999999999999997653221
Q ss_pred cceecccccCCCCCCccccCCCCCCCchhHHHHHHHHHHHHcCCCCCcccccCcchHhHhhhhhcCCccchhhcccccCc
Q 002021 838 SMIQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFTGKKPTDEIFNGEMTLKHWVNDWLPISTMEVVDANLLSQ 917 (979)
Q Consensus 838 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 917 (979)
.....|++.|+|||.+.+..++.++||||+|+++|||++|+.||......+. ....... ..
T Consensus 169 ---~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~-~~~~~~~------------~~--- 229 (284)
T 2vgo_A 169 ---RRTMCGTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFDSPSHTET-HRRIVNV------------DL--- 229 (284)
T ss_dssp ---BCCCCSCGGGCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCSSHHHH-HHHHHTT------------CC---
T ss_pred ---cccccCCCCcCCHHHhccCCCCcccchhhHHHHHHHHHHCCCCCCCCCHhHH-HHHHhcc------------cc---
Confidence 2345689999999999988999999999999999999999999975321110 1110000 00
Q ss_pred hhhhhHHHHHHHHHHHHHHHhccccCcCCCCCHHHHHHH
Q 002021 918 EDIHFVAKEQCVSFVFNLAMECTMEFPKQRINAKEIVTK 956 (979)
Q Consensus 918 ~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~eil~~ 956 (979)
..+..++..+.+++.+|++.||.+||++.|+++|
T Consensus 230 -----~~~~~~~~~~~~li~~~l~~~p~~Rps~~~ll~h 263 (284)
T 2vgo_A 230 -----KFPPFLSDGSKDLISKLLRYHPPQRLPLKGVMEH 263 (284)
T ss_dssp -----CCCTTSCHHHHHHHHHHSCSSGGGSCCHHHHHTC
T ss_pred -----CCCCcCCHHHHHHHHHHhhcCHhhCCCHHHHhhC
Confidence 0112345668999999999999999999999986
No 217
>4fl3_A Tyrosine-protein kinase SYK; transferase; HET: ANP; 1.90A {Homo sapiens} PDB: 4fl2_A* 1a81_A* 1csy_A* 1csz_A*
Probab=100.00 E-value=4.3e-38 Score=377.69 Aligned_cols=253 Identities=24% Similarity=0.371 Sum_probs=201.9
Q ss_pred ceeeeecceEEEEEEc---CCCcEEEEEEeccccc--cchhcHHHHHHHHHhcCCCCeeeEEEeeccCCeeEEEEEecCC
Q 002021 688 NLIGRGGFGSVYKASL---GDGMEVAVKVFTSQCG--RAFKSFDVECEIMKSIRHRNLIKVISSCSNEEFKALVLEYMPH 762 (979)
Q Consensus 688 ~~lG~G~~g~Vy~~~~---~~~~~vAvK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~E~~~~ 762 (979)
+.||+|+||.||+|.+ ..++.||||+++.... ...+.+.+|++++++++|||||++++++.. +..++||||+++
T Consensus 375 ~~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~-~~~~lv~E~~~~ 453 (635)
T 4fl3_A 375 KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGICEA-ESWMLVMEMAEL 453 (635)
T ss_dssp EEEEECSSEEEEEEEEECSSCEEEEEEEEECGGGGCGGGHHHHHHHHHHHHHCCCTTBCCEEEEEES-SSEEEEEECCTT
T ss_pred CEeccCCCEEEEEEEEcCCCcceEEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEec-CCEEEEEEccCC
Confidence 4799999999999944 3567899999975432 235779999999999999999999999965 457899999999
Q ss_pred CccceeeccCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCEEeCCCCcEEEEeeccccccCCCCC-ccee
Q 002021 763 GSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFSIAKMLTGEDQ-SMIQ 841 (979)
Q Consensus 763 g~L~~~l~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~i~H~Dik~~NIll~~~~~~kl~Dfg~~~~~~~~~~-~~~~ 841 (979)
|+|.+++... ..+++.+++.++.||+.||+||| +++|+||||||+||+++.++.+||+|||+++.+..... ....
T Consensus 454 g~L~~~l~~~-~~l~~~~~~~i~~qi~~~L~yLH---~~~iiHrDLkp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~~ 529 (635)
T 4fl3_A 454 GPLNKYLQQN-RHVKDKNIIELVHQVSMGMKYLE---ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQ 529 (635)
T ss_dssp EEHHHHHHHC-TTCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEEEETTEEEECCTTHHHHTTC--------
T ss_pred CCHHHHHhhC-CCCCHHHHHHHHHHHHHHHHHHH---HCCEeCCCCChHhEEEeCCCCEEEEEcCCccccccCccccccc
Confidence 9999999764 36899999999999999999999 99999999999999999999999999999987653332 1222
Q ss_pred cccccCCCCCCccccCCCCCCCchhHHHHHHHHHHHHc-CCCCCcccccCcchHhHhhhhhcCCccchhhcccccCchhh
Q 002021 842 TQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFT-GKKPTDEIFNGEMTLKHWVNDWLPISTMEVVDANLLSQEDI 920 (979)
Q Consensus 842 ~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~t-g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 920 (979)
....+|+.|+|||++.+..++.++|||||||++|||++ |+.||......+ ....+....
T Consensus 530 ~~~~~t~~y~APE~~~~~~~~~~sDvwSlGv~l~ellt~G~~Pf~~~~~~~--~~~~i~~~~------------------ 589 (635)
T 4fl3_A 530 THGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSE--VTAMLEKGE------------------ 589 (635)
T ss_dssp -----CGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCHHH--HHHHHHTTC------------------
T ss_pred cCCCCceeeeChhhhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHHH--HHHHHHcCC------------------
Confidence 33456789999999998899999999999999999998 999997532211 111111000
Q ss_pred hhHHHHHHHHHHHHHHHhccccCcCCCCCHHHHHHHHHHhHHhhc
Q 002021 921 HFVAKEQCVSFVFNLAMECTMEFPKQRINAKEIVTKLLKIRDSLL 965 (979)
Q Consensus 921 ~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~eil~~L~~~~~~~~ 965 (979)
+...+..++.++.++|.+||+.||++||++.++++.|+++..++.
T Consensus 590 ~~~~p~~~~~~l~~li~~cl~~dP~~RPs~~~l~~~L~~~~~~l~ 634 (635)
T 4fl3_A 590 RMGCPAGCPREMYDLMNLCWTYDVENRPGFAAVELRLRNYYYDVV 634 (635)
T ss_dssp CCCCCTTCCHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHHHHHC
T ss_pred CCCCCCCCCHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHHHHhc
Confidence 011123466789999999999999999999999999999987654
No 218
>3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens}
Probab=100.00 E-value=6.1e-38 Score=346.17 Aligned_cols=252 Identities=27% Similarity=0.351 Sum_probs=202.1
Q ss_pred hhCCCCCCceeeeecceEEEEEEc-CCCcEEEEEEeccccccchhcHHHHHHHHHhcCCCCeeeEEEeeccCCeeEEEEE
Q 002021 680 ATDGFSENNLIGRGGFGSVYKASL-GDGMEVAVKVFTSQCGRAFKSFDVECEIMKSIRHRNLIKVISSCSNEEFKALVLE 758 (979)
Q Consensus 680 ~~~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~E 758 (979)
..+.|+..+.||+|+||.||+|.. .+|+.||||++... ...+.+.+|+++++.++||||+++++++.+.+..++|||
T Consensus 27 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~--~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 104 (314)
T 3com_A 27 PEEVFDVLEKLGEGSYGSVYKAIHKETGQIVAIKQVPVE--SDLQEIIKEISIMQQCDSPHVVKYYGSYFKNTDLWIVME 104 (314)
T ss_dssp ---CEEEEEECC----CEEEEEEETTTCCEEEEEEEETT--SCCHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred chhhhhhheeeccCCCeEEEEEEECCCCCEEEEEecCch--HHHHHHHHHHHHHHhCCCCCCccEEEEEEeCCEEEEEee
Confidence 346788999999999999999954 46999999998754 345678899999999999999999999999999999999
Q ss_pred ecCCCccceeeccCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCEEeCCCCcEEEEeeccccccCCCCCc
Q 002021 759 YMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFSIAKMLTGEDQS 838 (979)
Q Consensus 759 ~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~i~H~Dik~~NIll~~~~~~kl~Dfg~~~~~~~~~~~ 838 (979)
|+++++|.+++......+++.+++.++.|++.|++||| +++|+||||||+||+++.++.+||+|||.+.......
T Consensus 105 ~~~~~~L~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH---~~~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~-- 179 (314)
T 3com_A 105 YCGAGSVSDIIRLRNKTLTEDEIATILQSTLKGLEYLH---FMRKIHRDIKAGNILLNTEGHAKLADFGVAGQLTDTM-- 179 (314)
T ss_dssp CCTTEEHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECTTCCEEECCCTTCEECBTTB--
T ss_pred cCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH---hCCCcCCCcCHHHEEECCCCCEEEeecccchhhhhhc--
Confidence 99999999998755567999999999999999999999 9999999999999999999999999999998764322
Q ss_pred ceecccccCCCCCCccccCCCCCCCchhHHHHHHHHHHHHcCCCCCcccccCcchHhHhhhhhcCCccchhhcccccCch
Q 002021 839 MIQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFTGKKPTDEIFNGEMTLKHWVNDWLPISTMEVVDANLLSQE 918 (979)
Q Consensus 839 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 918 (979)
.......||+.|+|||.+.+..++.++||||+|+++|||++|+.||........ .........
T Consensus 180 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~--~~~~~~~~~--------------- 242 (314)
T 3com_A 180 AKRNTVIGTPFWMAPEVIQEIGYNCVADIWSLGITAIEMAEGKPPYADIHPMRA--IFMIPTNPP--------------- 242 (314)
T ss_dssp SCBCCCCSCGGGCCHHHHSSSCBCTTHHHHHHHHHHHHHHHSSCTTTTSCHHHH--HHHHHHSCC---------------
T ss_pred cccCccCCCCCccChhhcCCCCCCccccHHHHHHHHHHHHhCCCCCCCCChHHH--HHHHhcCCC---------------
Confidence 122445689999999999988999999999999999999999999975321111 000000000
Q ss_pred hhhhHHHHHHHHHHHHHHHhccccCcCCCCCHHHHHHH
Q 002021 919 DIHFVAKEQCVSFVFNLAMECTMEFPKQRINAKEIVTK 956 (979)
Q Consensus 919 ~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~eil~~ 956 (979)
.....+..++..+.+++.+||..||++|||+.|+++|
T Consensus 243 -~~~~~~~~~~~~l~~li~~~l~~dp~~Rpt~~~ll~~ 279 (314)
T 3com_A 243 -PTFRKPELWSDNFTDFVKQCLVKSPEQRATATQLLQH 279 (314)
T ss_dssp -CCCSSGGGSCHHHHHHHHHHTCSCTTTSCCHHHHTTS
T ss_pred -cccCCcccCCHHHHHHHHHHccCChhhCcCHHHHHhC
Confidence 0001122345678999999999999999999999875
No 219
>2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B*
Probab=100.00 E-value=3.8e-38 Score=342.43 Aligned_cols=251 Identities=24% Similarity=0.379 Sum_probs=204.8
Q ss_pred hCCCCCCceeeeecceEEEEEEc-CCCcEEEEEEeccccccchhcHHHHHHHHHhcCCCCeeeEEEeecc----------
Q 002021 681 TDGFSENNLIGRGGFGSVYKASL-GDGMEVAVKVFTSQCGRAFKSFDVECEIMKSIRHRNLIKVISSCSN---------- 749 (979)
Q Consensus 681 ~~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~---------- 749 (979)
..+|+..+.||+|+||.||+|.. .+++.||||++.... +.+.+|+++++.++||||+++++++..
T Consensus 10 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~----~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~ 85 (284)
T 2a19_B 10 GMDFKEIELIGSGGFGQVFKAKHRIDGKTYVIKRVKYNN----EKAEREVKALAKLDHVNIVHYNGCWDGFDYDPETSSK 85 (284)
T ss_dssp HHHEEEEEEEECSSSCCEEEEEETTTCCEEEEEEEECCS----GGGHHHHHHHHHCCCTTBCCEEEEEEEEEEC------
T ss_pred ccccceeeeeccCCceEEEEEEEcCCCeEEEEEEecccc----HHHHHHHHHHHhCCCCCEEEEeeeEeccccCcccccc
Confidence 35688899999999999999965 479999999986542 467789999999999999999998754
Q ss_pred ------CCeeEEEEEecCCCccceeeccC-CCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCEEeCCCCcEE
Q 002021 750 ------EEFKALVLEYMPHGSLEKYLYSS-NCILDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAH 822 (979)
Q Consensus 750 ------~~~~~lv~E~~~~g~L~~~l~~~-~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~i~H~Dik~~NIll~~~~~~k 822 (979)
....++||||+++|+|.+++... ...+++..++.++.|++.||+||| +++|+||||||+||++++++.+|
T Consensus 86 ~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH---~~~i~H~dlkp~Nil~~~~~~~k 162 (284)
T 2a19_B 86 NSSRSKTKCLFIQMEFCDKGTLEQWIEKRRGEKLDKVLALELFEQITKGVDYIH---SKKLINRDLKPSNIFLVDTKQVK 162 (284)
T ss_dssp ---CCEEEEEEEEECCCCSCBHHHHHHHGGGSCCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEEEETTEEE
T ss_pred cccccCcceEEEEEeccCCCCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHH---hCCeeeccCCHHHEEEcCCCCEE
Confidence 45579999999999999999754 356899999999999999999999 89999999999999999999999
Q ss_pred EEeeccccccCCCCCcceecccccCCCCCCccccCCCCCCCchhHHHHHHHHHHHHcCCCCCcccccCcchHhHhhhhhc
Q 002021 823 LSDFSIAKMLTGEDQSMIQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFTGKKPTDEIFNGEMTLKHWVNDWL 902 (979)
Q Consensus 823 l~Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~tg~~P~~~~~~~~~~~~~~~~~~~ 902 (979)
|+|||++........ .....+|+.|+|||.+.+..++.++||||+|+++|||++|..|+.... .+.....
T Consensus 163 l~Dfg~~~~~~~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~~-------~~~~~~~ 232 (284)
T 2a19_B 163 IGDFGLVTSLKNDGK---RTRSKGTLRYMSPEQISSQDYGKEVDLYALGLILAELLHVCDTAFETS-------KFFTDLR 232 (284)
T ss_dssp ECCCTTCEESSCCSC---CCCCCSCCTTSCHHHHHCSCCCTHHHHHHHHHHHHHHHSCCSSHHHHH-------HHHHHHH
T ss_pred ECcchhheecccccc---ccccCCcccccChhhhccCCCcchhhhHHHHHHHHHHHhcCCcchhHH-------HHHHHhh
Confidence 999999987643322 234568999999999988889999999999999999999999864311 0100000
Q ss_pred CCccchhhcccccCchhhhhHHHHHHHHHHHHHHHhccccCcCCCCCHHHHHHHHHHhHHhhcc
Q 002021 903 PISTMEVVDANLLSQEDIHFVAKEQCVSFVFNLAMECTMEFPKQRINAKEIVTKLLKIRDSLLR 966 (979)
Q Consensus 903 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~eil~~L~~~~~~~~~ 966 (979)
. .. .+..++..+.+++.+||+.||++|||+.|++++|..+.++...
T Consensus 233 ~---------~~---------~~~~~~~~~~~li~~~l~~dp~~Rps~~e~l~~l~~~~~~~~~ 278 (284)
T 2a19_B 233 D---------GI---------ISDIFDKKEKTLLQKLLSKKPEDRPNTSEILRTLTVWKKSPEK 278 (284)
T ss_dssp T---------TC---------CCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHTC----
T ss_pred c---------cc---------ccccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHhhCCCc
Confidence 0 00 0112345688999999999999999999999999998765443
No 220
>2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A*
Probab=100.00 E-value=4.5e-38 Score=343.70 Aligned_cols=250 Identities=20% Similarity=0.286 Sum_probs=205.0
Q ss_pred hCCCCCCceeeeecceEEEEEEc-CCCcEEEEEEecccc---ccchhcHHHHHHHHHhcCCCCeeeEEEeeccCCeeEEE
Q 002021 681 TDGFSENNLIGRGGFGSVYKASL-GDGMEVAVKVFTSQC---GRAFKSFDVECEIMKSIRHRNLIKVISSCSNEEFKALV 756 (979)
Q Consensus 681 ~~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vAvK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 756 (979)
.++|...+.||+|+||.||+|.. .+++.||+|++.... ....+.+.+|+++++.++||||+++++++.+.+..++|
T Consensus 14 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv 93 (294)
T 2rku_A 14 RRRYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVV 93 (294)
T ss_dssp TEEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEE
T ss_pred ccceEEEEEEeecCCEEEEEEEECCCCceEEEEEechhhccCHHHHHHHHHHHHHHHhCCCCCEeeeeeeeccCCEEEEE
Confidence 35688899999999999999954 468899999986542 22346788899999999999999999999999999999
Q ss_pred EEecCCCccceeeccCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCEEeCCCCcEEEEeeccccccCCCC
Q 002021 757 LEYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFSIAKMLTGED 836 (979)
Q Consensus 757 ~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~i~H~Dik~~NIll~~~~~~kl~Dfg~~~~~~~~~ 836 (979)
|||+++++|.+++... ..+++.+++.++.|+++|++||| +++|+||||||+||+++.++.+||+|||.+.......
T Consensus 94 ~e~~~~~~L~~~~~~~-~~~~~~~~~~i~~qi~~~l~~lH---~~~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~ 169 (294)
T 2rku_A 94 LELCRRRSLLELHKRR-KALTEPEARYYLRQIVLGCQYLH---RNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDG 169 (294)
T ss_dssp EECCTTCBHHHHHHHH-CSCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEECTTCCEEECCCTTCEECCSTT
T ss_pred EecCCCCCHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHH---HCCccccCCChHhEEEcCCCCEEEEeccCceecccCc
Confidence 9999999999987654 36899999999999999999999 9999999999999999999999999999998764322
Q ss_pred CcceecccccCCCCCCccccCCCCCCCchhHHHHHHHHHHHHcCCCCCcccccCcchHhHhhhhhcCCccchhhcccccC
Q 002021 837 QSMIQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFTGKKPTDEIFNGEMTLKHWVNDWLPISTMEVVDANLLS 916 (979)
Q Consensus 837 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 916 (979)
. ......||+.|+|||.+.+..++.++||||+|+++|||++|+.||......+ .........
T Consensus 170 ~--~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~-~~~~~~~~~--------------- 231 (294)
T 2rku_A 170 E--RKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKE-TYLRIKKNE--------------- 231 (294)
T ss_dssp C--CBCCCCSCCSSCCHHHHTTSCBCTHHHHHHHHHHHHHHHHSSCTTCCSSHHH-HHHHHHTTC---------------
T ss_pred c--ccccccCCCCcCCcchhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHH-HHHHHhhcc---------------
Confidence 2 2244568999999999988889999999999999999999999997532111 111110000
Q ss_pred chhhhhHHHHHHHHHHHHHHHhccccCcCCCCCHHHHHHHH
Q 002021 917 QEDIHFVAKEQCVSFVFNLAMECTMEFPKQRINAKEIVTKL 957 (979)
Q Consensus 917 ~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~eil~~L 957 (979)
...+..++..+.+++.+||+.||++|||+.|++++-
T Consensus 232 -----~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~ll~~~ 267 (294)
T 2rku_A 232 -----YSIPKHINPVAASLIQKMLQTDPTARPTINELLNDE 267 (294)
T ss_dssp -----CCCCTTSCHHHHHHHHHHTCSSGGGSCCGGGGGGSH
T ss_pred -----CCCccccCHHHHHHHHHHcccChhhCcCHHHHhhCh
Confidence 001123345688999999999999999999999873
No 221
>2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A*
Probab=100.00 E-value=3.9e-38 Score=345.67 Aligned_cols=253 Identities=23% Similarity=0.313 Sum_probs=200.9
Q ss_pred hCCCCCCceeeeecceEEEEEEc-CCCcEEEEEEeccccccchhcHHHHHHHHHhcCCCCeeeEEEeeccCCeeEEEEEe
Q 002021 681 TDGFSENNLIGRGGFGSVYKASL-GDGMEVAVKVFTSQCGRAFKSFDVECEIMKSIRHRNLIKVISSCSNEEFKALVLEY 759 (979)
Q Consensus 681 ~~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~E~ 759 (979)
.+.|+..+.||+|+||.||+|.. .+++.||+|++........+.+.+|+++++.++||||+++++++.+++..++||||
T Consensus 18 ~~~y~i~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 97 (302)
T 2j7t_A 18 NEVWEIVGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGAYYHDGKLWIMIEF 97 (302)
T ss_dssp GGTEEEEEEEECSTTCCEEEEEETTTCCEEEEEEEC----CCHHHHHHHHHHHHHCCCTTBCCEEEEEECC-CEEEEEEC
T ss_pred ccceeecceeccCCCeEEEEEEEcCCCcEEEEEEecCCCHHHHHHHHHHHHHHhcCCCCCEeeeeeeeeeCCeEEEEEEe
Confidence 46788899999999999999965 46899999999766556667889999999999999999999999999999999999
Q ss_pred cCCCccceeeccCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCEEeCCCCcEEEEeeccccccCCCCCcc
Q 002021 760 MPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFSIAKMLTGEDQSM 839 (979)
Q Consensus 760 ~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~i~H~Dik~~NIll~~~~~~kl~Dfg~~~~~~~~~~~~ 839 (979)
+++++|.+++......+++..++.++.|++.|++||| +++++||||||+||+++.++.+||+|||++...... ..
T Consensus 98 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~--~~ 172 (302)
T 2j7t_A 98 CPGGAVDAIMLELDRGLTEPQIQVVCRQMLEALNFLH---SKRIIHRDLKAGNVLMTLEGDIRLADFGVSAKNLKT--LQ 172 (302)
T ss_dssp CTTEEHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCSGGGEEECTTSCEEECCCHHHHHHHHH--HH
T ss_pred CCCCcHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHh---cCCcccCCCCHHHEEECCCCCEEEEECCCCcccccc--cc
Confidence 9999999998776667999999999999999999999 899999999999999999999999999997643211 11
Q ss_pred eecccccCCCCCCcccc-----CCCCCCCchhHHHHHHHHHHHHcCCCCCcccccCcchHhHhhhhhcCCccchhhcccc
Q 002021 840 IQTQTLATIGYMAPEYG-----REGRVSANGDVYSFGIMLMETFTGKKPTDEIFNGEMTLKHWVNDWLPISTMEVVDANL 914 (979)
Q Consensus 840 ~~~~~~gt~~y~aPE~~-----~~~~~~~~~DvwslG~il~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 914 (979)
......||+.|+|||++ ....++.++||||+|+++|||++|+.||....... ..........+
T Consensus 173 ~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~-~~~~~~~~~~~----------- 240 (302)
T 2j7t_A 173 KRDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELNPMR-VLLKIAKSDPP----------- 240 (302)
T ss_dssp C-----CCGGGCCHHHHHHHHTTSTTTTTHHHHHHHHHHHHHHHHSSCTTTTSCHHH-HHHHHHHSCCC-----------
T ss_pred ccccccCChhhcCCeeeccccCCCCCCchhhhHHHHHHHHHHHhcCCCCCccCCHHH-HHHHHhccCCc-----------
Confidence 12335689999999987 46678999999999999999999999987532211 11111111000
Q ss_pred cCchhhhhHHHHHHHHHHHHHHHhccccCcCCCCCHHHHHHH
Q 002021 915 LSQEDIHFVAKEQCVSFVFNLAMECTMEFPKQRINAKEIVTK 956 (979)
Q Consensus 915 ~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~eil~~ 956 (979)
....+..++..+.+++.+||..||++|||+.|+++|
T Consensus 241 ------~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~h 276 (302)
T 2j7t_A 241 ------TLLTPSKWSVEFRDFLKIALDKNPETRPSAAQLLEH 276 (302)
T ss_dssp ------CCSSGGGSCHHHHHHHHHHSCSCTTTSCCHHHHTTS
T ss_pred ------ccCCccccCHHHHHHHHHHcccChhhCCCHHHHhcC
Confidence 001123345678999999999999999999999874
No 222
>3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A*
Probab=100.00 E-value=1.1e-37 Score=345.77 Aligned_cols=253 Identities=18% Similarity=0.236 Sum_probs=200.4
Q ss_pred hCCCCCC-ceeeeecceEEEEEE-cCCCcEEEEEEecccc--ccchhcHHHHHHHHHhcC-CCCeeeEEEeeccCCeeEE
Q 002021 681 TDGFSEN-NLIGRGGFGSVYKAS-LGDGMEVAVKVFTSQC--GRAFKSFDVECEIMKSIR-HRNLIKVISSCSNEEFKAL 755 (979)
Q Consensus 681 ~~~~~~~-~~lG~G~~g~Vy~~~-~~~~~~vAvK~~~~~~--~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~~~~l 755 (979)
.+.|... +.||+|+||.||+|. ..+++.||||++.... ......+.+|+.+++.++ ||||+++++++.+.+..++
T Consensus 27 ~~~y~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~iv~~~~~~~~~~~~~l 106 (327)
T 3lm5_A 27 NNFYILTSKELGRGKFAVVRQCISKSTGQEYAAKFLKKRRRGQDCRAEILHEIAVLELAKSCPRVINLHEVYENTSEIIL 106 (327)
T ss_dssp HHHEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEESEETTEECHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEE
T ss_pred hhEEeeccceeCCCCCeEEEEEEECCCCCEEEEEEEehhhcchHHHHHHHHHHHHHHhccCCCCEEEEEEEEEeCCeEEE
Confidence 3456555 789999999999995 4579999999987543 223567889999999995 6999999999999999999
Q ss_pred EEEecCCCccceeeccC-CCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCEEeCC---CCcEEEEeeccccc
Q 002021 756 VLEYMPHGSLEKYLYSS-NCILDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDD---NMVAHLSDFSIAKM 831 (979)
Q Consensus 756 v~E~~~~g~L~~~l~~~-~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~i~H~Dik~~NIll~~---~~~~kl~Dfg~~~~ 831 (979)
||||+++|+|.+++... ...+++.+++.++.|++.||+||| +++|+||||||+||+++. ++.+||+|||++..
T Consensus 107 v~e~~~~~~L~~~~~~~~~~~~~~~~~~~i~~ql~~~L~~LH---~~givH~Dikp~NIl~~~~~~~~~~kL~Dfg~a~~ 183 (327)
T 3lm5_A 107 ILEYAAGGEIFSLCLPELAEMVSENDVIRLIKQILEGVYYLH---QNNIVHLDLKPQNILLSSIYPLGDIKIVDFGMSRK 183 (327)
T ss_dssp EEECCTTEEGGGGGSSCC-CCCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCCGGGEEESCBTTBCCEEECCGGGCEE
T ss_pred EEEecCCCcHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHH---HCCeecCcCChHHEEEecCCCCCcEEEeeCccccc
Confidence 99999999999998654 457899999999999999999999 999999999999999997 78999999999987
Q ss_pred cCCCCCcceecccccCCCCCCccccCCCCCCCchhHHHHHHHHHHHHcCCCCCcccccCcchHhHhhhhhcCCccchhhc
Q 002021 832 LTGEDQSMIQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFTGKKPTDEIFNGEMTLKHWVNDWLPISTMEVVD 911 (979)
Q Consensus 832 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 911 (979)
..... ......||+.|+|||++.+..++.++||||+|+++|||++|+.||......+. ..........
T Consensus 184 ~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~-~~~i~~~~~~-------- 251 (327)
T 3lm5_A 184 IGHAC---ELREIMGTPEYLAPEILNYDPITTATDMWNIGIIAYMLLTHTSPFVGEDNQET-YLNISQVNVD-------- 251 (327)
T ss_dssp C------------CCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHH-HHHHHHTCCC--------
T ss_pred cCCcc---ccccccCCcCccCCeeecCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCchHH-HHHHHhcccc--------
Confidence 64322 12345799999999999999999999999999999999999999965322111 1111000000
Q ss_pred ccccCchhhhhHHHHHHHHHHHHHHHhccccCcCCCCCHHHHHHH
Q 002021 912 ANLLSQEDIHFVAKEQCVSFVFNLAMECTMEFPKQRINAKEIVTK 956 (979)
Q Consensus 912 ~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~eil~~ 956 (979)
........++..+.+++.+||+.||++|||++|+++|
T Consensus 252 --------~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~~ll~h 288 (327)
T 3lm5_A 252 --------YSEETFSSVSQLATDFIQSLLVKNPEKRPTAEICLSH 288 (327)
T ss_dssp --------CCTTTTTTSCHHHHHHHHHHSCSSGGGSCCHHHHTTC
T ss_pred --------cCchhhcccCHHHHHHHHHHcCCChhhCcCHHHHhCC
Confidence 0011112345678999999999999999999999876
No 223
>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei}
Probab=100.00 E-value=1.8e-37 Score=364.84 Aligned_cols=252 Identities=22% Similarity=0.318 Sum_probs=203.1
Q ss_pred hhCCCCCCceeeeecceEEEEEE-cCCCcEEEEEEeccccc-------------cchhcHHHHHHHHHhcCCCCeeeEEE
Q 002021 680 ATDGFSENNLIGRGGFGSVYKAS-LGDGMEVAVKVFTSQCG-------------RAFKSFDVECEIMKSIRHRNLIKVIS 745 (979)
Q Consensus 680 ~~~~~~~~~~lG~G~~g~Vy~~~-~~~~~~vAvK~~~~~~~-------------~~~~~~~~E~~~l~~l~h~niv~l~~ 745 (979)
..+.|+..+.||+|+||.||+|. ..+++.||||++..... ...+.+.+|++++++++||||+++++
T Consensus 34 i~~~Y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~ 113 (504)
T 3q5i_A 34 IGESYFKVRKLGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYNEISLLKSLDHPNIIKLFD 113 (504)
T ss_dssp GGGTEEEEEEEEC--CEEEEEEEETTTCCEEEEEEEEC----------------CTHHHHHHHHHHHHTCCCTTBCCEEE
T ss_pred cccceEEEeEecccCCeEEEEEEECCCCcEEEEEEEEhhhcccccccccchhhHHHHHHHHHHHHHHHhCCCCCCCeEEE
Confidence 45779999999999999999995 45789999999865421 23456889999999999999999999
Q ss_pred eeccCCeeEEEEEecCCCccceeeccCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCEEeCCCC---cEE
Q 002021 746 SCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNM---VAH 822 (979)
Q Consensus 746 ~~~~~~~~~lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~i~H~Dik~~NIll~~~~---~~k 822 (979)
++.+++..++||||+++|+|.+++.... .+++..++.++.|++.||+||| +++|+||||||+||+++.++ .+|
T Consensus 114 ~~~~~~~~~lv~e~~~gg~L~~~l~~~~-~~~~~~~~~i~~qi~~~l~~lH---~~~ivH~Dlkp~Nil~~~~~~~~~~k 189 (504)
T 3q5i_A 114 VFEDKKYFYLVTEFYEGGELFEQIINRH-KFDECDAANIMKQILSGICYLH---KHNIVHRDIKPENILLENKNSLLNIK 189 (504)
T ss_dssp EEECSSEEEEEEECCTTCBHHHHHHHHS-CCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEESSTTCCSSEE
T ss_pred EEEcCCEEEEEEecCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHH---HCCeEeCCCcHHHEEEecCCCCccEE
Confidence 9999999999999999999999886643 6899999999999999999999 99999999999999998765 699
Q ss_pred EEeeccccccCCCCCcceecccccCCCCCCccccCCCCCCCchhHHHHHHHHHHHHcCCCCCcccccCcchHhHhhhhhc
Q 002021 823 LSDFSIAKMLTGEDQSMIQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFTGKKPTDEIFNGEMTLKHWVNDWL 902 (979)
Q Consensus 823 l~Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~tg~~P~~~~~~~~~~~~~~~~~~~ 902 (979)
|+|||++....... ......||+.|+|||++. +.+++++||||+||++|+|++|+.||...... .....+.
T Consensus 190 l~Dfg~a~~~~~~~---~~~~~~gt~~y~aPE~~~-~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~--~~~~~i~--- 260 (504)
T 3q5i_A 190 IVDFGLSSFFSKDY---KLRDRLGTAYYIAPEVLK-KKYNEKCDVWSCGVIMYILLCGYPPFGGQNDQ--DIIKKVE--- 260 (504)
T ss_dssp ECCCTTCEECCTTS---CBCCCCSCTTTCCHHHHT-TCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHH--HHHHHHH---
T ss_pred EEECCCCEEcCCCC---ccccccCCcCCCCHHHhc-cCCCchHHHHHHHHHHHHHHhCCCCCCCCCHH--HHHHHHH---
Confidence 99999998764332 224567999999999886 56899999999999999999999999753211 1111000
Q ss_pred CCccchhhcccccCchhhhhHHHHHHHHHHHHHHHhccccCcCCCCCHHHHHHH
Q 002021 903 PISTMEVVDANLLSQEDIHFVAKEQCVSFVFNLAMECTMEFPKQRINAKEIVTK 956 (979)
Q Consensus 903 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~eil~~ 956 (979)
..........+..+++++.+++.+|++.||.+|||+.|+++|
T Consensus 261 ------------~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~t~~e~l~h 302 (504)
T 3q5i_A 261 ------------KGKYYFDFNDWKNISDEAKELIKLMLTYDYNKRCTAEEALNS 302 (504)
T ss_dssp ------------HCCCCCCHHHHTTSCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred ------------cCCCCCCccccCCCCHHHHHHHHHHcCCChhHCCCHHHHhcC
Confidence 000111122334566789999999999999999999999876
No 224
>3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A*
Probab=100.00 E-value=9.2e-38 Score=342.79 Aligned_cols=250 Identities=25% Similarity=0.359 Sum_probs=206.8
Q ss_pred CCCCCCceeeeecceEEEEEE-cCCCcEEEEEEecccc-ccchhcHHHHHHHHHhcCCCCeeeEEEeeccCCeeEEEEEe
Q 002021 682 DGFSENNLIGRGGFGSVYKAS-LGDGMEVAVKVFTSQC-GRAFKSFDVECEIMKSIRHRNLIKVISSCSNEEFKALVLEY 759 (979)
Q Consensus 682 ~~~~~~~~lG~G~~g~Vy~~~-~~~~~~vAvK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~E~ 759 (979)
+.|+..+.||+|+||.||+|. ..+++.||||++.... ....+.+.+|+.+++.++||||+++++++.+++..++||||
T Consensus 22 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 101 (303)
T 3a7i_A 22 ELFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKDTKLWIIMEY 101 (303)
T ss_dssp GTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEETTTCSTTHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEEC
T ss_pred HHHHHhhhhcccCCeEEEEEEECCCCcEEEEEEecccccHHHHHHHHHHHHHHHhCCCCCEeEEEEEEecCCeEEEEEEe
Confidence 568888999999999999995 4578999999987543 33457789999999999999999999999999999999999
Q ss_pred cCCCccceeeccCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCEEeCCCCcEEEEeeccccccCCCCCcc
Q 002021 760 MPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFSIAKMLTGEDQSM 839 (979)
Q Consensus 760 ~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~i~H~Dik~~NIll~~~~~~kl~Dfg~~~~~~~~~~~~ 839 (979)
+++++|.+++... .+++.+++.++.|++.|++||| +++|+||||||+||+++.++.+||+|||.+....... .
T Consensus 102 ~~~~~L~~~~~~~--~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dl~p~Nil~~~~~~~kl~Dfg~~~~~~~~~--~ 174 (303)
T 3a7i_A 102 LGGGSALDLLEPG--PLDETQIATILREILKGLDYLH---SEKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQ--I 174 (303)
T ss_dssp CTTEEHHHHHTTS--CCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECTTSCEEECCCTTCEECBTTB--C
T ss_pred CCCCcHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHH---HCCCccCCCChheEEECCCCCEEEeecccceecCccc--c
Confidence 9999999998653 6899999999999999999999 8999999999999999999999999999998764332 2
Q ss_pred eecccccCCCCCCccccCCCCCCCchhHHHHHHHHHHHHcCCCCCcccccCcchHhHhhhhhcCCccchhhcccccCchh
Q 002021 840 IQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFTGKKPTDEIFNGEMTLKHWVNDWLPISTMEVVDANLLSQED 919 (979)
Q Consensus 840 ~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 919 (979)
......||+.|+|||.+.+..++.++||||||+++|||++|+.||......+ ....+......
T Consensus 175 ~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~--~~~~~~~~~~~--------------- 237 (303)
T 3a7i_A 175 KRNTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPPHSELHPMK--VLFLIPKNNPP--------------- 237 (303)
T ss_dssp CBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHH--HHHHHHHSCCC---------------
T ss_pred ccCccCCCcCccCHHHHhcCCCCchhhhHHHHHHHHHHccCCCCCCCcCHHH--HHHHhhcCCCC---------------
Confidence 2244578999999999999899999999999999999999999987532111 11111100000
Q ss_pred hhhHHHHHHHHHHHHHHHhccccCcCCCCCHHHHHHHHH
Q 002021 920 IHFVAKEQCVSFVFNLAMECTMEFPKQRINAKEIVTKLL 958 (979)
Q Consensus 920 ~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~eil~~L~ 958 (979)
..+..++..+.+++.+||+.||++|||+.|++++.-
T Consensus 238 ---~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~~~ 273 (303)
T 3a7i_A 238 ---TLEGNYSKPLKEFVEACLNKEPSFRPTAKELLKHKF 273 (303)
T ss_dssp ---CCCSSCCHHHHHHHHHHCCSSGGGSCCHHHHTTCHH
T ss_pred ---CCccccCHHHHHHHHHHcCCChhhCcCHHHHhhChh
Confidence 011234566899999999999999999999998754
No 225
>3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 4ec9_A* 4ec8_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* 4bch_A* 4bci_A* 4bcj_A* 4bcf_A*
Probab=100.00 E-value=1.9e-37 Score=347.84 Aligned_cols=272 Identities=21% Similarity=0.285 Sum_probs=204.1
Q ss_pred hCCCCCCceeeeecceEEEEEEc-CCCcEEEEEEeccccc--cchhcHHHHHHHHHhcCCCCeeeEEEeecc--------
Q 002021 681 TDGFSENNLIGRGGFGSVYKASL-GDGMEVAVKVFTSQCG--RAFKSFDVECEIMKSIRHRNLIKVISSCSN-------- 749 (979)
Q Consensus 681 ~~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vAvK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~~~~~~-------- 749 (979)
.++|+..+.||+|+||.||+|.. .+|+.||||++..... .....+.+|+++++.++||||+++++++..
T Consensus 16 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 95 (351)
T 3mi9_A 16 VSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKASPYNRC 95 (351)
T ss_dssp GGGEEEEEECSSCSTTSEEEEEETTTCCEEEEEECCCSSCSSSSCHHHHHHHHHHHHCCCTTBCCEEEEEEEC-------
T ss_pred ccceeEEEEEecCCCcEEEEEEECCCCCEEEEEEEecccccccchHHHHHHHHHHHhccCCCcccHhheeeccccccccC
Confidence 36788999999999999999954 6799999999865432 234567889999999999999999999876
Q ss_pred CCeeEEEEEecCCCccceeeccCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCEEeCCCCcEEEEeeccc
Q 002021 750 EEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFSIA 829 (979)
Q Consensus 750 ~~~~~lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~i~H~Dik~~NIll~~~~~~kl~Dfg~~ 829 (979)
.+..++||||+++ ++.+.+......+++.+++.++.|++.||+||| +++|+||||||+||+++.++.+||+|||++
T Consensus 96 ~~~~~lv~e~~~~-~l~~~l~~~~~~~~~~~~~~i~~qi~~~l~~LH---~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~a 171 (351)
T 3mi9_A 96 KGSIYLVFDFCEH-DLAGLLSNVLVKFTLSEIKRVMQMLLNGLYYIH---RNKILHRDMKAANVLITRDGVLKLADFGLA 171 (351)
T ss_dssp -CEEEEEEECCSE-EHHHHHHCTTSCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECTTSCEEECCCTTC
T ss_pred CceEEEEEeccCC-CHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHH---HCCeeCCCCCHHHEEEcCCCCEEEccchhc
Confidence 4568999999975 888888776667999999999999999999999 999999999999999999999999999999
Q ss_pred cccCCCC--CcceecccccCCCCCCccccCC-CCCCCchhHHHHHHHHHHHHcCCCCCcccccCcch--HhHhhhhhcCC
Q 002021 830 KMLTGED--QSMIQTQTLATIGYMAPEYGRE-GRVSANGDVYSFGIMLMETFTGKKPTDEIFNGEMT--LKHWVNDWLPI 904 (979)
Q Consensus 830 ~~~~~~~--~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwslG~il~el~tg~~P~~~~~~~~~~--~~~~~~~~~~~ 904 (979)
..+.... .........||+.|+|||++.+ ..++.++||||+||++|||++|+.||......... +........+.
T Consensus 172 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~ 251 (351)
T 3mi9_A 172 RAFSLAKNSQPNRYTNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALISQLCGSITPE 251 (351)
T ss_dssp EECCCCSSSSCCCCCSSCSCGGGCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCTT
T ss_pred ccccccccccccccCCcccccCccCchhhcCCCCCCcHhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCChh
Confidence 8764222 1222345678999999998875 45899999999999999999999999763222111 01111111111
Q ss_pred ccchhhcccc------cCchh---hhhHHHHHHHHHHHHHHHhccccCcCCCCCHHHHHHH
Q 002021 905 STMEVVDANL------LSQED---IHFVAKEQCVSFVFNLAMECTMEFPKQRINAKEIVTK 956 (979)
Q Consensus 905 ~~~~~~~~~~------~~~~~---~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~eil~~ 956 (979)
.......... ..... .........++.+.+++.+|++.||++|||++|+++|
T Consensus 252 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h 312 (351)
T 3mi9_A 252 VWPNVDNYELYEKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDPAQRIDSDDALNH 312 (351)
T ss_dssp TSTTGGGCGGGTSSCCCSSCCCCHHHHHHHHHCCHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred hccccccchhhcccccccccccCHHHHhhhccCChHHHHHHHHHhcCChhhCCCHHHHhCC
Confidence 1111100000 00000 0011111234668999999999999999999999987
No 226
>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A*
Probab=100.00 E-value=9.5e-38 Score=365.73 Aligned_cols=251 Identities=22% Similarity=0.307 Sum_probs=203.2
Q ss_pred hCCCCCCceeeeecceEEEEEEc-CCCcEEEEEEecccc--ccchhcHHHHHHHHHhcCCCCeeeEEEeeccCCeeEEEE
Q 002021 681 TDGFSENNLIGRGGFGSVYKASL-GDGMEVAVKVFTSQC--GRAFKSFDVECEIMKSIRHRNLIKVISSCSNEEFKALVL 757 (979)
Q Consensus 681 ~~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vAvK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 757 (979)
.+.|++.+.||+|+||.||+|.. .+++.||||++.... ....+.+.+|++++++++||||+++++++.+....++||
T Consensus 21 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~ 100 (486)
T 3mwu_A 21 AERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILEDSSSFYIVG 100 (486)
T ss_dssp HHHEEEEEEEECCSSSEEEEEEETTTCCEEEEEEEEHHHHBCSCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred hcceEEeEEEeecCCEEEEEEEECCCCCEEEEEEEecccccchHHHHHHHHHHHHHhCCCCCcCeEEEEEEcCCEEEEEE
Confidence 35688899999999999999954 579999999986432 234567889999999999999999999999999999999
Q ss_pred EecCCCccceeeccCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCEEeC---CCCcEEEEeeccccccCC
Q 002021 758 EYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLD---DNMVAHLSDFSIAKMLTG 834 (979)
Q Consensus 758 E~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~i~H~Dik~~NIll~---~~~~~kl~Dfg~~~~~~~ 834 (979)
||+++|+|.+++.... .+++.++..++.|++.||+||| +++|+||||||+||+++ .++.+||+|||++.....
T Consensus 101 e~~~~~~L~~~~~~~~-~~~~~~~~~i~~qi~~al~~lH---~~~ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~ 176 (486)
T 3mwu_A 101 ELYTGGELFDEIIKRK-RFSEHDAARIIKQVFSGITYMH---KHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQ 176 (486)
T ss_dssp CCCCSCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEESSSSTTCCEEECSCSCTTTBCC
T ss_pred EcCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---HCCeEeccCchHHEEEecCCCCCCEEEEECCcCeECCC
Confidence 9999999999886643 6899999999999999999999 99999999999999995 456799999999987643
Q ss_pred CCCcceecccccCCCCCCccccCCCCCCCchhHHHHHHHHHHHHcCCCCCcccccCcchHhHhhhhhcCCccchhhcccc
Q 002021 835 EDQSMIQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFTGKKPTDEIFNGEMTLKHWVNDWLPISTMEVVDANL 914 (979)
Q Consensus 835 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 914 (979)
.. ......||+.|+|||++.+ .+++++||||+||++|+|++|+.||......+ .........
T Consensus 177 ~~---~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~-~~~~i~~~~------------- 238 (486)
T 3mwu_A 177 NT---KMKDRIGTAYYIAPEVLRG-TYDEKCDVWSAGVILYILLSGTPPFYGKNEYD-ILKRVETGK------------- 238 (486)
T ss_dssp C-------CCTTGGGGCCGGGGGS-CCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHH-HHHHHHHTC-------------
T ss_pred CC---ccCCCcCCCCCCCHHHhCC-CCCchhhHHHHHHHHHHHHhCCCCCCCCCHHH-HHHHHHhCC-------------
Confidence 22 2345679999999999865 58999999999999999999999996532111 111110000
Q ss_pred cCchhhhhHHHHHHHHHHHHHHHhccccCcCCCCCHHHHHHH
Q 002021 915 LSQEDIHFVAKEQCVSFVFNLAMECTMEFPKQRINAKEIVTK 956 (979)
Q Consensus 915 ~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~eil~~ 956 (979)
.....+.+..+++++.+++.+||+.||++|||+.|+++|
T Consensus 239 ---~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~t~~~~l~h 277 (486)
T 3mwu_A 239 ---YAFDLPQWRTISDDAKDLIRKMLTFHPSLRITATQCLEH 277 (486)
T ss_dssp ---CCSCSGGGGGSCHHHHHHHHHHTCSSTTTSCCHHHHHHC
T ss_pred ---CCCCCcccCCCCHHHHHHHHHHcCCChhhCcCHHHHhcC
Confidence 001112233456779999999999999999999999987
No 227
>3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A
Probab=100.00 E-value=6.2e-38 Score=341.85 Aligned_cols=251 Identities=24% Similarity=0.276 Sum_probs=188.0
Q ss_pred hCCCCCCceeeeecceEEEEEE-cCCCcEEEEEEecccccc--chhcHHHHHHHHHhcCCCCeeeEEEeeccCCeeEEEE
Q 002021 681 TDGFSENNLIGRGGFGSVYKAS-LGDGMEVAVKVFTSQCGR--AFKSFDVECEIMKSIRHRNLIKVISSCSNEEFKALVL 757 (979)
Q Consensus 681 ~~~~~~~~~lG~G~~g~Vy~~~-~~~~~~vAvK~~~~~~~~--~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 757 (979)
.++|+..+.||+|+||.||+|. ..+|+.||||++...... ..+.+.++...++.++||||+++++++.+++..++||
T Consensus 6 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~h~~iv~~~~~~~~~~~~~lv~ 85 (290)
T 3fme_A 6 ADDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYGALFREGDVWICM 85 (290)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEC---CHHHHHHHHHHHHHHHTTCCCTTBCCEEEEEECSSSEEEEE
T ss_pred HHhhhhHHhcCCCCCeEEEEEEecCCCeEEEEEEeecccCcHHHHHHHHHHHHHHHhCCCCeEEEEeeeeeccCCEEEEE
Confidence 4678889999999999999995 468999999998754221 2233445555688889999999999999999999999
Q ss_pred EecCCCccceeecc---CCCCCCHHHHHHHHHHHHHHHHHHhcCCCC-CeEecCCCCCCEEeCCCCcEEEEeeccccccC
Q 002021 758 EYMPHGSLEKYLYS---SNCILDIFQRLNIMIDVASALEYLHFGYSA-PVIHCDLKPSNVLLDDNMVAHLSDFSIAKMLT 833 (979)
Q Consensus 758 E~~~~g~L~~~l~~---~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~-~i~H~Dik~~NIll~~~~~~kl~Dfg~~~~~~ 833 (979)
||++ |+|.+++.. ....+++..++.++.|++.|++||| ++ +|+||||||+||+++.++.+||+|||++....
T Consensus 86 e~~~-~~l~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH---~~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~ 161 (290)
T 3fme_A 86 ELMD-TSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLH---SKLSVIHRDVKPSNVLINALGQVKMCDFGISGYLV 161 (290)
T ss_dssp ECCS-EEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHH---HHSCCCCCCCSGGGCEECTTCCEEBCCC-------
T ss_pred ehhc-cchHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHh---hcCCeecCCCCHHHEEECCCCCEEEeecCCccccc
Confidence 9997 488777654 3557999999999999999999999 87 99999999999999999999999999998764
Q ss_pred CCCCcceecccccCCCCCCcccc----CCCCCCCchhHHHHHHHHHHHHcCCCCCcccccCcchHhHhhhhhcCCccchh
Q 002021 834 GEDQSMIQTQTLATIGYMAPEYG----REGRVSANGDVYSFGIMLMETFTGKKPTDEIFNGEMTLKHWVNDWLPISTMEV 909 (979)
Q Consensus 834 ~~~~~~~~~~~~gt~~y~aPE~~----~~~~~~~~~DvwslG~il~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~ 909 (979)
... ......||+.|+|||.+ .+..++.++||||+|+++|||++|+.||..................+..
T Consensus 162 ~~~---~~~~~~~t~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~---- 234 (290)
T 3fme_A 162 DDV---AKDIDAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSWGTPFQQLKQVVEEPSPQL---- 234 (290)
T ss_dssp -----------CCCCCCSCHHHHSCCTTC--CCHHHHHHHHHHHHHHHHHTSCSSCCCSCHHHHHHHHHHSCCCCC----
T ss_pred ccc---cccccCCCccccChhhcChhhcCcCCCcHHHHHHHHHHHHHHHHCCCCccccCchHHHHHHHhccCCCCc----
Confidence 322 22344689999999995 5567899999999999999999999999753222222222111111000
Q ss_pred hcccccCchhhhhHHHHHHHHHHHHHHHhccccCcCCCCCHHHHHHH
Q 002021 910 VDANLLSQEDIHFVAKEQCVSFVFNLAMECTMEFPKQRINAKEIVTK 956 (979)
Q Consensus 910 ~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~eil~~ 956 (979)
....++.++.+++.+|++.||++|||+.|+++|
T Consensus 235 --------------~~~~~~~~~~~li~~~l~~~p~~Rpt~~e~l~h 267 (290)
T 3fme_A 235 --------------PADKFSAEFVDFTSQCLKKNSKERPTYPELMQH 267 (290)
T ss_dssp --------------CTTTSCHHHHHHHHHHTCSSGGGSCCHHHHTTS
T ss_pred --------------ccccCCHHHHHHHHHHhhcChhhCcCHHHHHhC
Confidence 012345668999999999999999999999885
No 228
>4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} PDB: 4bbm_A*
Probab=100.00 E-value=4.2e-38 Score=350.03 Aligned_cols=268 Identities=24% Similarity=0.327 Sum_probs=201.2
Q ss_pred hCCCCCCceeeeecceEEEEEEc-CCCcEEEEEEecccccc--chhcHHHHHHHHHhcCCCCeeeEEEeeccCCeeEEEE
Q 002021 681 TDGFSENNLIGRGGFGSVYKASL-GDGMEVAVKVFTSQCGR--AFKSFDVECEIMKSIRHRNLIKVISSCSNEEFKALVL 757 (979)
Q Consensus 681 ~~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vAvK~~~~~~~~--~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 757 (979)
.++|+..+.||+|+||.||+|.. .+|+.||||++...... ..+.+.+|+++++.++||||+++++++.+.+..++||
T Consensus 24 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ 103 (331)
T 4aaa_A 24 MEKYENLGLVGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVKKIAMREIKLLKQLRHENLVNLLEVCKKKKRWYLVF 103 (331)
T ss_dssp GGGEEEEEEGGGGTTSSEEEEEETTTCCEEEEEEEESCSSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEE
T ss_pred hhhheeeeEEeecCCEEEEEEEECCCCceEEEEEEecCCCchHHHHHHHHHHHHHhhCCCCCEeeEEEEeecCCEEEEEE
Confidence 46788899999999999999954 56999999998654322 2455778999999999999999999999999999999
Q ss_pred EecCCCccceeeccCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCEEeCCCCcEEEEeeccccccCCCCC
Q 002021 758 EYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFSIAKMLTGEDQ 837 (979)
Q Consensus 758 E~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~i~H~Dik~~NIll~~~~~~kl~Dfg~~~~~~~~~~ 837 (979)
||+++++|.++.... ..+++..+..++.|++.|++||| +++|+||||||+||+++.++.+||+|||.+........
T Consensus 104 e~~~~~~l~~~~~~~-~~~~~~~~~~~~~qi~~~l~~LH---~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~ 179 (331)
T 4aaa_A 104 EFVDHTILDDLELFP-NGLDYQVVQKYLFQIINGIGFCH---SHNIIHRDIKPENILVSQSGVVKLCDFGFARTLAAPGE 179 (331)
T ss_dssp ECCSEEHHHHHHHST-TCCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEECTTSCEEECCCTTC--------
T ss_pred ecCCcchHHHHHhhc-cCCCHHHHHHHHHHHHHHHHHHH---HCCEEccCcChheEEEcCCCcEEEEeCCCceeecCCcc
Confidence 999998888876543 36899999999999999999999 99999999999999999999999999999986543222
Q ss_pred cceecccccCCCCCCccccCCC-CCCCchhHHHHHHHHHHHHcCCCCCcccccCcchHhHhhhhhcCC-----------c
Q 002021 838 SMIQTQTLATIGYMAPEYGREG-RVSANGDVYSFGIMLMETFTGKKPTDEIFNGEMTLKHWVNDWLPI-----------S 905 (979)
Q Consensus 838 ~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwslG~il~el~tg~~P~~~~~~~~~~~~~~~~~~~~~-----------~ 905 (979)
......+|+.|+|||++.+. .++.++||||+||++|||++|+.||......+. ........... .
T Consensus 180 --~~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 256 (331)
T 4aaa_A 180 --VYDDEVATRWYRAPELLVGDVKYGKAVDVWAIGCLVTEMFMGEPLFPGDSDIDQ-LYHIMMCLGNLIPRHQELFNKNP 256 (331)
T ss_dssp ------CCCCCTTCCHHHHTTCTTCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHH-HHHHHHHHCSCCHHHHHHHHHCG
T ss_pred --ccCCCcCCccccCcccccCCCCcchHHHHHHHHHHHHHHHhCCCCCCCCCcHHH-HHHHHHHhCCCChhhhhHhhhcc
Confidence 22445789999999998765 789999999999999999999999976432211 11111000000 0
Q ss_pred -cchhhcccccCchhhhhHHHHHHHHHHHHHHHhccccCcCCCCCHHHHHHH
Q 002021 906 -TMEVVDANLLSQEDIHFVAKEQCVSFVFNLAMECTMEFPKQRINAKEIVTK 956 (979)
Q Consensus 906 -~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~eil~~ 956 (979)
......+.... ..........++..+.+++.+||+.||++|||+.|+++|
T Consensus 257 ~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~ell~h 307 (331)
T 4aaa_A 257 VFAGVRLPEIKE-REPLERRYPKLSEVVIDLAKKCLHIDPDKRPFCAELLHH 307 (331)
T ss_dssp GGTTCCCCCCSS-CCCHHHHSTTSCHHHHHHHHHHTCSSGGGSCCGGGGGGS
T ss_pred ccccccCccccc-cchhhhcccchhHHHHHHHHHHhccCcccCCCHHHHhcC
Confidence 00000000000 011111223456789999999999999999999999986
No 229
>2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A*
Probab=100.00 E-value=4.8e-38 Score=349.94 Aligned_cols=249 Identities=20% Similarity=0.284 Sum_probs=204.8
Q ss_pred hCCCCCCceeeeecceEEEEEEc-CCCcEEEEEEecccc---ccchhcHHHHHHHHHhcCCCCeeeEEEeeccCCeeEEE
Q 002021 681 TDGFSENNLIGRGGFGSVYKASL-GDGMEVAVKVFTSQC---GRAFKSFDVECEIMKSIRHRNLIKVISSCSNEEFKALV 756 (979)
Q Consensus 681 ~~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vAvK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 756 (979)
.++|...+.||+|+||.||+|.. .+++.||+|++.... ....+.+.+|+++++.++||||+++++++.+.+..++|
T Consensus 40 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv 119 (335)
T 2owb_A 40 RRRYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVV 119 (335)
T ss_dssp TEEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEE
T ss_pred CCceEEEEEEeeCCCeEEEEEEECCCCCEEEEEEechhhhcCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEecCCeEEEE
Confidence 35788899999999999999954 568899999986542 22456788899999999999999999999999999999
Q ss_pred EEecCCCccceeeccCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCEEeCCCCcEEEEeeccccccCCCC
Q 002021 757 LEYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFSIAKMLTGED 836 (979)
Q Consensus 757 ~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~i~H~Dik~~NIll~~~~~~kl~Dfg~~~~~~~~~ 836 (979)
|||+++++|.+++... ..+++.+++.++.|++.||+||| +++|+||||||+||+++.++.+||+|||++.......
T Consensus 120 ~e~~~~~~L~~~~~~~-~~l~~~~~~~i~~qi~~aL~~LH---~~~ivH~dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~ 195 (335)
T 2owb_A 120 LELCRRRSLLELHKRR-KALTEPEARYYLRQIVLGCQYLH---RNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDG 195 (335)
T ss_dssp ECCCTTCBHHHHHHHH-CSCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCCGGGEEECTTCCEEECCCTTCEECCSTT
T ss_pred EecCCCCCHHHHHhcc-CCCCHHHHHHHHHHHHHHHHHHH---HCCCEecCCCchhEEEcCCCCEEEeeccCceecccCc
Confidence 9999999999987654 36899999999999999999999 9999999999999999999999999999998764322
Q ss_pred CcceecccccCCCCCCccccCCCCCCCchhHHHHHHHHHHHHcCCCCCcccccCcchHhHhhhhhcCCccchhhcccccC
Q 002021 837 QSMIQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFTGKKPTDEIFNGEMTLKHWVNDWLPISTMEVVDANLLS 916 (979)
Q Consensus 837 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 916 (979)
. ......||+.|+|||.+.+..++.++||||||+++|||++|+.||......+ ..........
T Consensus 196 ~--~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~-~~~~~~~~~~-------------- 258 (335)
T 2owb_A 196 E--RKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKE-TYLRIKKNEY-------------- 258 (335)
T ss_dssp C--CBCCCCSCCSSCCHHHHHTSCBCTHHHHHHHHHHHHHHHHSSCTTCCSSHHH-HHHHHHHTCC--------------
T ss_pred c--cccccCCCccccCHHHhccCCCCchhhHHHHHHHHHHHHHCcCCCCCCCHHH-HHHHHhcCCC--------------
Confidence 2 2244578999999999988889999999999999999999999996532111 1111100000
Q ss_pred chhhhhHHHHHHHHHHHHHHHhccccCcCCCCCHHHHHHH
Q 002021 917 QEDIHFVAKEQCVSFVFNLAMECTMEFPKQRINAKEIVTK 956 (979)
Q Consensus 917 ~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~eil~~ 956 (979)
..+..++..+.+++.+||+.||++|||+.|++++
T Consensus 259 ------~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~~ 292 (335)
T 2owb_A 259 ------SIPKHINPVAASLIQKMLQTDPTARPTINELLND 292 (335)
T ss_dssp ------CCCTTSCHHHHHHHHHHTCSSGGGSCCGGGGGGS
T ss_pred ------CCCccCCHHHHHHHHHHccCChhHCcCHHHHhcC
Confidence 0112334568899999999999999999999986
No 230
>1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B*
Probab=100.00 E-value=1.9e-38 Score=346.10 Aligned_cols=259 Identities=25% Similarity=0.380 Sum_probs=199.1
Q ss_pred CCCCCCceeeeecceEEEEEEc--CCCc--EEEEEEecccc---ccchhcHHHHHHHHHhcCCCCeeeEEEeeccCCeeE
Q 002021 682 DGFSENNLIGRGGFGSVYKASL--GDGM--EVAVKVFTSQC---GRAFKSFDVECEIMKSIRHRNLIKVISSCSNEEFKA 754 (979)
Q Consensus 682 ~~~~~~~~lG~G~~g~Vy~~~~--~~~~--~vAvK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~ 754 (979)
++|+..+.||+|+||.||+|.+ .+++ .||||+++... ....+.+.+|++++++++||||+++++++.++. .+
T Consensus 18 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~-~~ 96 (291)
T 1u46_A 18 KDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLTPP-MK 96 (291)
T ss_dssp GGEEEEEECC----CCCEEEEEECTTSCEEEEEEEC--------CHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSS-CE
T ss_pred hHeeeeeeecCCCceeEEEEEeccCCCceeEEEEEEEccCccCCHHHHHHHHHHHHHHHhCCCCCcccEEEEEccCC-ce
Confidence 5788899999999999999964 2333 68999986542 234567889999999999999999999998765 78
Q ss_pred EEEEecCCCccceeeccCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCEEeCCCCcEEEEeeccccccCC
Q 002021 755 LVLEYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFSIAKMLTG 834 (979)
Q Consensus 755 lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~i~H~Dik~~NIll~~~~~~kl~Dfg~~~~~~~ 834 (979)
+||||+++++|.+++......+++.++..++.|++.|++||| +++|+||||||+||+++.++.+||+|||++.....
T Consensus 97 ~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~~ 173 (291)
T 1u46_A 97 MVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLE---SKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQ 173 (291)
T ss_dssp EEEECCTTCBHHHHHHHHGGGSCHHHHHHHHHHHHHHHHHHH---HTTEECSCCCGGGEEEEETTEEEECCCTTCEECCC
T ss_pred eeEecccCCCHHHHHHhccCCcCHHHHHHHHHHHHHHHHHHH---hCCcccCCCchheEEEcCCCCEEEccccccccccc
Confidence 999999999999999876667999999999999999999999 99999999999999999999999999999987654
Q ss_pred CCCcc-eecccccCCCCCCccccCCCCCCCchhHHHHHHHHHHHHc-CCCCCcccccCcchHhHhhhhhcCCccchhhcc
Q 002021 835 EDQSM-IQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFT-GKKPTDEIFNGEMTLKHWVNDWLPISTMEVVDA 912 (979)
Q Consensus 835 ~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~t-g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 912 (979)
..... ......+|+.|+|||.+.+..++.++||||+|+++|||++ |+.||...... .....+....
T Consensus 174 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~--~~~~~~~~~~---------- 241 (291)
T 1u46_A 174 NDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGS--QILHKIDKEG---------- 241 (291)
T ss_dssp -CCEEEC-----CCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCTTTTCCHH--HHHHHHHTSC----------
T ss_pred cccchhhhccCCCCceeeCchhhcCCCCCchhhHHHHHHHHHHHHhCCCCCcccCCHH--HHHHHHHccC----------
Confidence 33221 2234467889999999988889999999999999999999 99998653211 1111100000
Q ss_pred cccCchhhhhHHHHHHHHHHHHHHHhccccCcCCCCCHHHHHHHHHHhHHh
Q 002021 913 NLLSQEDIHFVAKEQCVSFVFNLAMECTMEFPKQRINAKEIVTKLLKIRDS 963 (979)
Q Consensus 913 ~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~eil~~L~~~~~~ 963 (979)
.....+..++..+.+++.+||..||++|||+.|++++|+++..+
T Consensus 242 -------~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~~~ 285 (291)
T 1u46_A 242 -------ERLPRPEDCPQDIYNVMVQCWAHKPEDRPTFVALRDFLLEAQPT 285 (291)
T ss_dssp -------CCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHC--
T ss_pred -------CCCCCCcCcCHHHHHHHHHHccCCcccCcCHHHHHHHHHHhCcc
Confidence 00011124556799999999999999999999999999988753
No 231
>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A*
Probab=100.00 E-value=1.5e-37 Score=364.66 Aligned_cols=251 Identities=21% Similarity=0.314 Sum_probs=199.6
Q ss_pred hCCCCCCceeeeecceEEEEEEc-CCCcEEEEEEecccc--ccchhcHHHHHHHHHhcCCCCeeeEEEeeccCCeeEEEE
Q 002021 681 TDGFSENNLIGRGGFGSVYKASL-GDGMEVAVKVFTSQC--GRAFKSFDVECEIMKSIRHRNLIKVISSCSNEEFKALVL 757 (979)
Q Consensus 681 ~~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vAvK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 757 (979)
.+.|+..+.||+|+||.||+|.. .+++.||||++.... ....+.+.+|+++++.++||||+++++++.+.+..++||
T Consensus 36 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~ 115 (494)
T 3lij_A 36 SEMYQRVKKLGSGAYGEVLLCRDKVTHVERAIKIIRKTSVSTSSNSKLLEEVAVLKLLDHPNIMKLYDFFEDKRNYYLVM 115 (494)
T ss_dssp HHHEEEEEEEECC---EEEEEEETTTCCEEEEEEEEC-----CTTHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred hcCeEEeeEEecCCCEEEEEEEECCCCcEEEEEEEeccccCchHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEE
Confidence 34688899999999999999954 578999999987543 234567889999999999999999999999999999999
Q ss_pred EecCCCccceeeccCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCEEeCCC---CcEEEEeeccccccCC
Q 002021 758 EYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDN---MVAHLSDFSIAKMLTG 834 (979)
Q Consensus 758 E~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~i~H~Dik~~NIll~~~---~~~kl~Dfg~~~~~~~ 834 (979)
||+++|+|.+++... ..+++..++.++.||+.||+||| +++|+||||||+||+++.. +.+||+|||++.....
T Consensus 116 e~~~~g~L~~~~~~~-~~~~~~~~~~i~~qi~~~l~~lH---~~~ivH~Dlkp~Nil~~~~~~~~~~kl~DfG~a~~~~~ 191 (494)
T 3lij_A 116 ECYKGGELFDEIIHR-MKFNEVDAAVIIKQVLSGVTYLH---KHNIVHRDLKPENLLLESKEKDALIKIVDFGLSAVFEN 191 (494)
T ss_dssp ECCCSCBHHHHHHHH-SSCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEESCSSTTCCEEECCCTTCEECBT
T ss_pred ecCCCCcHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHH---HCCceeccCChhhEEEeCCCCCCcEEEEECCCCeECCC
Confidence 999999999888654 35899999999999999999999 9999999999999999764 4599999999987643
Q ss_pred CCCcceecccccCCCCCCccccCCCCCCCchhHHHHHHHHHHHHcCCCCCcccccCcchHhHhhhhhcCCccchhhcccc
Q 002021 835 EDQSMIQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFTGKKPTDEIFNGEMTLKHWVNDWLPISTMEVVDANL 914 (979)
Q Consensus 835 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 914 (979)
.. ......||+.|+|||++. +.+++++||||+||++|+|++|+.||......+ ...........
T Consensus 192 ~~---~~~~~~gt~~y~aPE~l~-~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~-~~~~i~~~~~~----------- 255 (494)
T 3lij_A 192 QK---KMKERLGTAYYIAPEVLR-KKYDEKCDVWSIGVILFILLAGYPPFGGQTDQE-ILRKVEKGKYT----------- 255 (494)
T ss_dssp TB---CBCCCCSCTTTCCHHHHT-TCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHH-HHHHHHHTCCC-----------
T ss_pred Cc---cccccCCCcCeeCHHHHc-ccCCCchhHHHHHHHHHHHHhCCCCCCCCCHHH-HHHHHHhCCCC-----------
Confidence 32 224567999999999876 568999999999999999999999997532211 11111110000
Q ss_pred cCchhhhhHHHHHHHHHHHHHHHhccccCcCCCCCHHHHHHH
Q 002021 915 LSQEDIHFVAKEQCVSFVFNLAMECTMEFPKQRINAKEIVTK 956 (979)
Q Consensus 915 ~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~eil~~ 956 (979)
...+.+..+++.+.+++.+||+.||.+|||+.|+++|
T Consensus 256 -----~~~~~~~~~s~~~~~li~~~L~~dp~~R~s~~e~l~h 292 (494)
T 3lij_A 256 -----FDSPEWKNVSEGAKDLIKQMLQFDSQRRISAQQALEH 292 (494)
T ss_dssp -----CCSGGGTTSCHHHHHHHHHHTCSSTTTSCCHHHHHTC
T ss_pred -----CCchhcccCCHHHHHHHHHHCCCChhhCccHHHHhcC
Confidence 0111223456679999999999999999999999987
No 232
>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A*
Probab=100.00 E-value=6.6e-38 Score=367.24 Aligned_cols=250 Identities=23% Similarity=0.338 Sum_probs=204.9
Q ss_pred CCCCCCceeeeecceEEEEEEc-CCCcEEEEEEecccc---ccchhcHHHHHHHHHhcCCCCeeeEEEeeccCCeeEEEE
Q 002021 682 DGFSENNLIGRGGFGSVYKASL-GDGMEVAVKVFTSQC---GRAFKSFDVECEIMKSIRHRNLIKVISSCSNEEFKALVL 757 (979)
Q Consensus 682 ~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vAvK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 757 (979)
+.|+..+.||+|+||.||+|.. .+|+.||||++.... ....+.+.+|++++++++||||+++++++.+.+..++||
T Consensus 26 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~ 105 (484)
T 3nyv_A 26 DRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLYEFFEDKGYFYLVG 105 (484)
T ss_dssp HHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCBSSCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred CceEEeeEEecCCCEEEEEEEECCCCCEEEEEEEEhhhcccchHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEEEEE
Confidence 5688899999999999999954 589999999986542 234567889999999999999999999999999999999
Q ss_pred EecCCCccceeeccCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCEEe---CCCCcEEEEeeccccccCC
Q 002021 758 EYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLL---DDNMVAHLSDFSIAKMLTG 834 (979)
Q Consensus 758 E~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~i~H~Dik~~NIll---~~~~~~kl~Dfg~~~~~~~ 834 (979)
||+++|+|.+++.... .+++.+++.++.|++.||+||| +++|+||||||+||++ +.++.+||+|||++..+..
T Consensus 106 e~~~~~~L~~~~~~~~-~~~~~~~~~i~~qi~~~l~~lH---~~~ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~ 181 (484)
T 3nyv_A 106 EVYTGGELFDEIISRK-RFSEVDAARIIRQVLSGITYMH---KNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEA 181 (484)
T ss_dssp CCCCSCBHHHHHHTCS-CCBHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEESSSSTTCCEEECCTTHHHHBCC
T ss_pred ecCCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---HCCeeeCCCCHHHEEEecCCCCCcEEEEeeeeeEEccc
Confidence 9999999999887654 6899999999999999999999 9999999999999999 4678999999999987643
Q ss_pred CCCcceecccccCCCCCCccccCCCCCCCchhHHHHHHHHHHHHcCCCCCcccccCcchHhHhhhhhcCCccchhhcccc
Q 002021 835 EDQSMIQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFTGKKPTDEIFNGEMTLKHWVNDWLPISTMEVVDANL 914 (979)
Q Consensus 835 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 914 (979)
.. ......||+.|+|||++.+ .+++++||||+||++|+|++|+.||...... .....+...
T Consensus 182 ~~---~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~ll~g~~pf~~~~~~--~~~~~i~~~------------- 242 (484)
T 3nyv_A 182 SK---KMKDKIGTAYYIAPEVLHG-TYDEKCDVWSTGVILYILLSGCPPFNGANEY--DILKKVEKG------------- 242 (484)
T ss_dssp CC---SHHHHTTGGGTCCHHHHHT-CCCTHHHHHHHHHHHHHHHHSSCSSCCSSHH--HHHHHHHHC-------------
T ss_pred cc---ccccCCCCccccCceeecC-CCCCcceeHHHHHHHHHHHHCCCCCCCCCHH--HHHHHHHcC-------------
Confidence 32 2244579999999998865 6899999999999999999999999753211 111111100
Q ss_pred cCchhhhhHHHHHHHHHHHHHHHhccccCcCCCCCHHHHHHH
Q 002021 915 LSQEDIHFVAKEQCVSFVFNLAMECTMEFPKQRINAKEIVTK 956 (979)
Q Consensus 915 ~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~eil~~ 956 (979)
......+.+..+++.+.+++.+|++.||++|||+.|+++|
T Consensus 243 --~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~s~~e~l~h 282 (484)
T 3nyv_A 243 --KYTFELPQWKKVSESAKDLIRKMLTYVPSMRISARDALDH 282 (484)
T ss_dssp --CCCCCSGGGGGSCHHHHHHHHHHTCSSGGGSCCHHHHHTS
T ss_pred --CCCCCCcccccCCHHHHHHHHHHCCCChhHCcCHHHHhhC
Confidence 0000112233456779999999999999999999999986
No 233
>3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II}
Probab=100.00 E-value=1.7e-37 Score=352.32 Aligned_cols=272 Identities=23% Similarity=0.320 Sum_probs=201.0
Q ss_pred HhhCCCCCCceeeeecceEEEEEE-cCCCcEEEEEEeccccccchhcHHHHHHHHHhcCCCCeeeEEEeecc--------
Q 002021 679 RATDGFSENNLIGRGGFGSVYKAS-LGDGMEVAVKVFTSQCGRAFKSFDVECEIMKSIRHRNLIKVISSCSN-------- 749 (979)
Q Consensus 679 ~~~~~~~~~~~lG~G~~g~Vy~~~-~~~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~-------- 749 (979)
...++|+..+.||+|+||.||+|. ..+|+.||||++.... ....+|+++++.++||||+++++++..
T Consensus 4 ~~~~~y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~~~~~~----~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~~~~ 79 (383)
T 3eb0_A 4 TSSKKYSLGKTLGTGSFGIVCEVFDIESGKRFALKKVLQDP----RYKNRELDIMKVLDHVNIIKLVDYFYTTGDEEPKP 79 (383)
T ss_dssp --CTTEEEEEEEECC-CEEEEEEEETTTCCEEEEEEEECCT----TSCCHHHHHHTTCCCTTBCCEEEEEEEC-------
T ss_pred cccceEEEEEEEEeccCEEEEEEEECCCCCEEEEEEEecCc----chHHHHHHHHHHcCCCCccchhheeeecCcccccc
Confidence 345789999999999999999995 5689999999986442 233479999999999999999998833
Q ss_pred ------------------------------CCeeEEEEEecCCCccceeecc---CCCCCCHHHHHHHHHHHHHHHHHHh
Q 002021 750 ------------------------------EEFKALVLEYMPHGSLEKYLYS---SNCILDIFQRLNIMIDVASALEYLH 796 (979)
Q Consensus 750 ------------------------------~~~~~lv~E~~~~g~L~~~l~~---~~~~l~~~~~~~i~~~ia~~L~~LH 796 (979)
....++||||++ |+|.+.+.. ....+++..++.++.|+++||+|||
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH 158 (383)
T 3eb0_A 80 PQPPDDHNKLGGKNNGVNNHHKSVIVNPSQNKYLNVIMEYVP-DTLHKVLKSFIRSGRSIPMNLISIYIYQLFRAVGFIH 158 (383)
T ss_dssp ------------------------------CCEEEEEECCCS-EEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHH
T ss_pred cccccccccccccccccccccccccccCCCceEEEEEEecCC-ccHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH
Confidence 334889999998 487777653 3457999999999999999999999
Q ss_pred cCCCCCeEecCCCCCCEEeC-CCCcEEEEeeccccccCCCCCcceecccccCCCCCCccccCCC-CCCCchhHHHHHHHH
Q 002021 797 FGYSAPVIHCDLKPSNVLLD-DNMVAHLSDFSIAKMLTGEDQSMIQTQTLATIGYMAPEYGREG-RVSANGDVYSFGIML 874 (979)
Q Consensus 797 ~~~~~~i~H~Dik~~NIll~-~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwslG~il 874 (979)
+++|+||||||+||+++ .++.+||+|||+++....... .....+|+.|+|||.+.+. .++.++||||+||++
T Consensus 159 ---~~gi~H~Dikp~Nil~~~~~~~~kl~Dfg~a~~~~~~~~---~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il 232 (383)
T 3eb0_A 159 ---SLGICHRDIKPQNLLVNSKDNTLKLCDFGSAKKLIPSEP---SVAYICSRFYRAPELMLGATEYTPSIDLWSIGCVF 232 (383)
T ss_dssp ---TTTEECSCCCGGGEEEETTTTEEEECCCTTCEECCTTSC---CCCCCCCSSCCCHHHHTTCSSCCTHHHHHHHHHHH
T ss_pred ---HCcCccCccCHHHEEEcCCCCcEEEEECCCCcccCCCCC---CcCcccCCCccCHHHhcCCCCCCcchhhhhHHHHH
Confidence 99999999999999998 689999999999987643322 2345689999999988764 589999999999999
Q ss_pred HHHHcCCCCCcccccCcchHhHhhhhhcCCccchh--hccc-------ccCchhhhhHHHHHHHHHHHHHHHhccccCcC
Q 002021 875 METFTGKKPTDEIFNGEMTLKHWVNDWLPISTMEV--VDAN-------LLSQEDIHFVAKEQCVSFVFNLAMECTMEFPK 945 (979)
Q Consensus 875 ~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~-------~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~ 945 (979)
|||++|+.||......+ .....+..........+ ..+. ...........+..+++++.+++.+||+.||+
T Consensus 233 ~ell~g~~pf~~~~~~~-~~~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~ 311 (383)
T 3eb0_A 233 GELILGKPLFSGETSID-QLVRIIQIMGTPTKEQMIRMNPHYTEVRFPTLKAKDWRKILPEGTPSLAIDLLEQILRYEPD 311 (383)
T ss_dssp HHHHHSSCSSCCSSHHH-HHHHHHHHHCCCCHHHHHHHCTTC--CCCCCCCCCCHHHHSCTTCCHHHHHHHHHHCCSSGG
T ss_pred HHHHhCCCCCCCCChHH-HHHHHHHHhCCCCHHHHHHhCcccccccCCccCcccHHhhCCCCCCHHHHHHHHHHccCChh
Confidence 99999999997532211 11111111110000000 0000 00011111222334667799999999999999
Q ss_pred CCCCHHHHHHH--HHHhHH
Q 002021 946 QRINAKEIVTK--LLKIRD 962 (979)
Q Consensus 946 ~Rps~~eil~~--L~~~~~ 962 (979)
+|||+.|+++| +.++.+
T Consensus 312 ~R~t~~e~l~hp~f~~~~~ 330 (383)
T 3eb0_A 312 LRINPYEAMAHPFFDHLRN 330 (383)
T ss_dssp GSCCHHHHHTSGGGHHHHH
T ss_pred hCCCHHHHhcCHHHHHHHh
Confidence 99999999975 444444
No 234
>2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ...
Probab=100.00 E-value=4.4e-37 Score=347.09 Aligned_cols=262 Identities=21% Similarity=0.222 Sum_probs=193.6
Q ss_pred hCCCCCCceeeeecceEEEEEE-cCCCcEEEEEEecccc--ccchhcHHHHHHHHHhcCCCCeeeEEEeeccCC------
Q 002021 681 TDGFSENNLIGRGGFGSVYKAS-LGDGMEVAVKVFTSQC--GRAFKSFDVECEIMKSIRHRNLIKVISSCSNEE------ 751 (979)
Q Consensus 681 ~~~~~~~~~lG~G~~g~Vy~~~-~~~~~~vAvK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~------ 751 (979)
.++|+..+.||+|+||.||+|. ..+++.||||++.... ....+.+.+|+.+++.++||||+++++++...+
T Consensus 24 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~ 103 (371)
T 2xrw_A 24 LKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQ 103 (371)
T ss_dssp ETTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEECTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSCCSTTTCC
T ss_pred hhheeEeeeeEecCCEEEEEEEECCCCceEEEEEeccccCChHHHHHHHHHHHHHHhcCCCCccceEEeecccccccccc
Confidence 4678999999999999999994 5578999999986532 223466889999999999999999999987654
Q ss_pred eeEEEEEecCCCccceeeccCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCEEeCCCCcEEEEeeccccc
Q 002021 752 FKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFSIAKM 831 (979)
Q Consensus 752 ~~~lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~i~H~Dik~~NIll~~~~~~kl~Dfg~~~~ 831 (979)
..++||||+++ +|.+++.. .+++.++..++.|++.||+||| +++|+||||||+||+++.++.+||+|||++..
T Consensus 104 ~~~lv~e~~~~-~l~~~~~~---~~~~~~~~~i~~qi~~al~~lH---~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~a~~ 176 (371)
T 2xrw_A 104 DVYIVMELMDA-NLCQVIQM---ELDHERMSYLLYQMLCGIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLART 176 (371)
T ss_dssp EEEEEEECCSE-EHHHHHHS---CCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEECTTSCEEECCCCC---
T ss_pred ceEEEEEcCCC-CHHHHHhh---ccCHHHHHHHHHHHHHHHHHHH---HCCeecccCCHHHEEEcCCCCEEEEEeecccc
Confidence 78999999975 78777753 4899999999999999999999 99999999999999999999999999999986
Q ss_pred cCCCCCcceecccccCCCCCCccccCCCCCCCchhHHHHHHHHHHHHcCCCCCcccccCcchHhHhhhhhcCCccc----
Q 002021 832 LTGEDQSMIQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFTGKKPTDEIFNGEMTLKHWVNDWLPISTM---- 907 (979)
Q Consensus 832 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~---- 907 (979)
.... .......||+.|+|||++.+..++.++||||+||++|||++|+.||......+ .+...+... .....
T Consensus 177 ~~~~---~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~-~~~~i~~~~-~~~~~~~~~ 251 (371)
T 2xrw_A 177 AGTS---FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHID-QWNKVIEQL-GTPCPEFMK 251 (371)
T ss_dssp ----------------CTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHH-HHHHHHC-C-CCCCHHHHT
T ss_pred cccc---cccCCceecCCccCHHHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCHHH-HHHHHHHHh-CCCCHHHHH
Confidence 5322 12244578999999999998899999999999999999999999997532111 111111000 00000
Q ss_pred ----------------------hhhcccccCchhhhhHHHHHHHHHHHHHHHhccccCcCCCCCHHHHHHHH
Q 002021 908 ----------------------EVVDANLLSQEDIHFVAKEQCVSFVFNLAMECTMEFPKQRINAKEIVTKL 957 (979)
Q Consensus 908 ----------------------~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~eil~~L 957 (979)
......... .........+.++.+++.+|++.||++|||++|+++|=
T Consensus 252 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~hp 320 (371)
T 2xrw_A 252 KLQPTVRTYVENRPKYAGYSFEKLFPDVLFP---ADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQHP 320 (371)
T ss_dssp TSCHHHHHHHHSSCCCCCCCHHHHSCGGGSC---CSSHHHHHHHHHHHHHHHHHSCSSGGGSCCHHHHHHSH
T ss_pred HhhhHHHHHHhhCccccccchhhhcccccCc---ccccccccccHHHHHHHHHHCcCChhhCCCHHHHhCCc
Confidence 000000000 00112234467899999999999999999999999873
No 235
>3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A
Probab=100.00 E-value=1.2e-38 Score=360.80 Aligned_cols=241 Identities=15% Similarity=0.153 Sum_probs=188.4
Q ss_pred hCCCCCCceeeeecceEEEEEEc-CCCcEEEEEEeccc---cccchhcHHHHHHH---HHhcCCCCeeeEE-------Ee
Q 002021 681 TDGFSENNLIGRGGFGSVYKASL-GDGMEVAVKVFTSQ---CGRAFKSFDVECEI---MKSIRHRNLIKVI-------SS 746 (979)
Q Consensus 681 ~~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vAvK~~~~~---~~~~~~~~~~E~~~---l~~l~h~niv~l~-------~~ 746 (979)
.+.|+..+.||+|+||.||+|.. .+|+.||||++... .....+.+.+|+++ ++.++|||||+++ ++
T Consensus 72 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~hpniv~~~~~~~~~~~~ 151 (377)
T 3byv_A 72 PRTLVRGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFDL 151 (377)
T ss_dssp CEEEEEEEEEEEETTEEEEEEEC-CCCCEEEEEEEEECC-CCTTHHHHHHHHHHGGGGSTTCCSHHHHHHHHCBCCCSEE
T ss_pred CceEEEcceeecCCCEEEEEEEECCCCcEEEEEEEeeccccchHHHHHHHHHHHHHHhccccCCHHHHHHHhhhhhhhhh
Confidence 35677889999999999999975 57999999998743 23345778899954 5555799999998 55
Q ss_pred eccCC-----------------eeEEEEEecCCCccceeeccCCC------CCCHHHHHHHHHHHHHHHHHHhcCCCCCe
Q 002021 747 CSNEE-----------------FKALVLEYMPHGSLEKYLYSSNC------ILDIFQRLNIMIDVASALEYLHFGYSAPV 803 (979)
Q Consensus 747 ~~~~~-----------------~~~lv~E~~~~g~L~~~l~~~~~------~l~~~~~~~i~~~ia~~L~~LH~~~~~~i 803 (979)
+.+++ ..++||||+ +|+|.+++...+. .+++..++.|+.||+.||+||| +++|
T Consensus 152 ~~~~~~~~~~~~~~~~~~~~i~~~~lv~E~~-~g~L~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH---~~~i 227 (377)
T 3byv_A 152 VKDPQKKKMIRVRLDERDMWVLSRFFLYPRM-QSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLH---HYGL 227 (377)
T ss_dssp EECTTSCSEEEC------CEEESEEEEEECC-SEEHHHHHHHHHHTTTTTHHHHHHHHHHHHHHHHHHHHHHH---HTTE
T ss_pred hhccCCccccccccCCCceEEEEEEEEEecc-CCCHHHHHHhccccccccccccHHHHHHHHHHHHHHHHHHH---hCCe
Confidence 55443 278999999 6799999876421 2335888899999999999999 9999
Q ss_pred EecCCCCCCEEeCCCCcEEEEeeccccccCCCCCcceecccccCCCCCCccccCCC-----------CCCCchhHHHHHH
Q 002021 804 IHCDLKPSNVLLDDNMVAHLSDFSIAKMLTGEDQSMIQTQTLATIGYMAPEYGREG-----------RVSANGDVYSFGI 872 (979)
Q Consensus 804 ~H~Dik~~NIll~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-----------~~~~~~DvwslG~ 872 (979)
+||||||+||+++.++.+||+|||+++.... ......| +.|+|||++.+. .++.++|||||||
T Consensus 228 vHrDikp~NIll~~~~~~kL~DFG~a~~~~~-----~~~~~~g-~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DvwSlG~ 301 (377)
T 3byv_A 228 VHTYLRPVDIVLDQRGGVFLTGFEHLVRDGA-----RVVSSVS-RGFEPPELEARRATISYHRDRRTLMTFSFDAWALGL 301 (377)
T ss_dssp ECSCCCGGGEEECTTCCEEECCGGGCEETTC-----EEECCCC-TTCCCHHHHHHHTSTHHHHCCEEECCHHHHHHHHHH
T ss_pred ecCCCCHHHEEEcCCCCEEEEechhheecCC-----cccCCCC-cCccChhhhcccccccccccccccCChhhhHHHHHH
Confidence 9999999999999999999999999986321 2234567 999999999877 8999999999999
Q ss_pred HHHHHHcCCCCCcccccCcchHhHhhhhhcCCccchhhcccccCchhhhhHHHHHHHHHHHHHHHhccccCcCCCCCHHH
Q 002021 873 MLMETFTGKKPTDEIFNGEMTLKHWVNDWLPISTMEVVDANLLSQEDIHFVAKEQCVSFVFNLAMECTMEFPKQRINAKE 952 (979)
Q Consensus 873 il~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~e 952 (979)
++|||++|+.||......... . .+.. ....+++++.+++.+||+.||++|||+.|
T Consensus 302 il~elltg~~Pf~~~~~~~~~-~------------~~~~------------~~~~~~~~~~~li~~~L~~dp~~Rpt~~e 356 (377)
T 3byv_A 302 VIYWIWCADLPITKDAALGGS-E------------WIFR------------SCKNIPQPVRALLEGFLRYPKEDRLLPLQ 356 (377)
T ss_dssp HHHHHHHSSCCC------CCS-G------------GGGS------------SCCCCCHHHHHHHHHHTCSSGGGCCCHHH
T ss_pred HHHHHHHCCCCCcccccccch-h------------hhhh------------hccCCCHHHHHHHHHHcCCCchhCCCHHH
Confidence 999999999999653221110 0 0000 00234567899999999999999999999
Q ss_pred HHHH
Q 002021 953 IVTK 956 (979)
Q Consensus 953 il~~ 956 (979)
+++|
T Consensus 357 ~l~h 360 (377)
T 3byv_A 357 AMET 360 (377)
T ss_dssp HHTS
T ss_pred HhhC
Confidence 9874
No 236
>1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=8.6e-38 Score=350.46 Aligned_cols=254 Identities=24% Similarity=0.319 Sum_probs=202.5
Q ss_pred CCCCCCceeeeecceEEEEEEc----CCCcEEEEEEecccc----ccchhcHHHHHHHHHhc-CCCCeeeEEEeeccCCe
Q 002021 682 DGFSENNLIGRGGFGSVYKASL----GDGMEVAVKVFTSQC----GRAFKSFDVECEIMKSI-RHRNLIKVISSCSNEEF 752 (979)
Q Consensus 682 ~~~~~~~~lG~G~~g~Vy~~~~----~~~~~vAvK~~~~~~----~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~ 752 (979)
++|+..+.||+|+||.||+|+. .+++.||||+++... ....+.+.+|+++++.+ +||||+++++++..++.
T Consensus 54 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~ 133 (355)
T 1vzo_A 54 ENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTETK 133 (355)
T ss_dssp GGEEEEEEEEETTTEEEEEEEECSSTTTTCEEEEEEESEEEEEEEESSGGGCCCHHHHHHHHHTCTTBCCEEEEEEETTE
T ss_pred cceEEEEEeccCCCEEEEEEEEcccCCCCeEEEEEEEeHHHhhhhhhHHHHHHHHHHHHHHccCCCceeEEEEEEeeCce
Confidence 5788899999999999999965 478999999986532 22345677899999999 69999999999999999
Q ss_pred eEEEEEecCCCccceeeccCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCEEeCCCCcEEEEeecccccc
Q 002021 753 KALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFSIAKML 832 (979)
Q Consensus 753 ~~lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~i~H~Dik~~NIll~~~~~~kl~Dfg~~~~~ 832 (979)
.++||||+++|+|.+++.... .+++.+++.++.|++.||+||| +++|+||||||+||+++.++.+||+|||+++..
T Consensus 134 ~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~qi~~aL~~LH---~~~ivH~Dlkp~NIll~~~~~~kl~DfG~a~~~ 209 (355)
T 1vzo_A 134 LHLILDYINGGELFTHLSQRE-RFTEHEVQIYVGEIVLALEHLH---KLGIIYRDIKLENILLDSNGHVVLTDFGLSKEF 209 (355)
T ss_dssp EEEEECCCCSCBHHHHHHHHS-CCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEECTTSCEEESCSSEEEEC
T ss_pred EEEEeecCCCCCHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCCHHHEEECCCCcEEEeeCCCCeec
Confidence 999999999999999987643 6899999999999999999999 899999999999999999999999999999865
Q ss_pred CCCCCcceecccccCCCCCCccccCC--CCCCCchhHHHHHHHHHHHHcCCCCCcccccCcchHhHhhhhhcCCccchhh
Q 002021 833 TGEDQSMIQTQTLATIGYMAPEYGRE--GRVSANGDVYSFGIMLMETFTGKKPTDEIFNGEMTLKHWVNDWLPISTMEVV 910 (979)
Q Consensus 833 ~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~~~DvwslG~il~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~ 910 (979)
..... .......||+.|+|||++.+ ..++.++|||||||++|||++|+.||........ ...+.....
T Consensus 210 ~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~~~~-~~~~~~~~~-------- 279 (355)
T 1vzo_A 210 VADET-ERAYDFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASPFTVDGEKNS-QAEISRRIL-------- 279 (355)
T ss_dssp CGGGG-GGGCGGGSCCTTCCHHHHTTCC---CTHHHHHHHHHHHHHHHHSSCTTSCTTSCCC-HHHHHHHHH--------
T ss_pred ccCCC-CcccCcccCcCccChhhhcCCCCCCCchhhHHHHHHHHHHHHHCCCCCccCCccch-HHHHHHHHh--------
Confidence 43222 22234579999999999875 3478999999999999999999999975322211 111111000
Q ss_pred cccccCchhhhhHHHHHHHHHHHHHHHhccccCcCCCC-----CHHHHHHHH
Q 002021 911 DANLLSQEDIHFVAKEQCVSFVFNLAMECTMEFPKQRI-----NAKEIVTKL 957 (979)
Q Consensus 911 ~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rp-----s~~eil~~L 957 (979)
.. ....+..++..+.+++.+||..||++|| +++|+++|.
T Consensus 280 ~~--------~~~~~~~~~~~~~~li~~~L~~dP~~R~~~~~~s~~ell~h~ 323 (355)
T 1vzo_A 280 KS--------EPPYPQEMSALAKDLIQRLLMKDPKKRLGCGPRDADEIKEHL 323 (355)
T ss_dssp HC--------CCCCCTTSCHHHHHHHHHHTCSSGGGSTTSSTTTHHHHHTSG
T ss_pred cc--------CCCCCcccCHHHHHHHHHHhhhCHHHhcCCCCCCHHHHHcCc
Confidence 00 0011123456688999999999999999 999999875
No 237
>2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A*
Probab=100.00 E-value=3.6e-37 Score=341.11 Aligned_cols=252 Identities=24% Similarity=0.303 Sum_probs=198.0
Q ss_pred hCCCCCCceeeeecceEEEEEE-cCCCcEEEEEEecccc--------ccchhcHHHHHHHHHhcCCCCeeeEEEeeccCC
Q 002021 681 TDGFSENNLIGRGGFGSVYKAS-LGDGMEVAVKVFTSQC--------GRAFKSFDVECEIMKSIRHRNLIKVISSCSNEE 751 (979)
Q Consensus 681 ~~~~~~~~~lG~G~~g~Vy~~~-~~~~~~vAvK~~~~~~--------~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~ 751 (979)
.++|+..+.||+|+||.||+|. ..+++.||||++.... ......+.+|+++++.++||||+++++++..+.
T Consensus 9 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~ 88 (322)
T 2ycf_A 9 RDEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFDAED 88 (322)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECC---------------CHHHHHHHHHHCCCTTBCCEEEEEESSS
T ss_pred hhceeEeeEEecCCCEEEEEEEEcCCCcEEEEEEeehhhhhhcccccchhhhhHHHHHHHHHhCCCCCCceEeeEEcCCc
Confidence 4568899999999999999995 4578999999986432 122356889999999999999999999987665
Q ss_pred eeEEEEEecCCCccceeeccCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCEEeCCCCc---EEEEeecc
Q 002021 752 FKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMV---AHLSDFSI 828 (979)
Q Consensus 752 ~~~lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~i~H~Dik~~NIll~~~~~---~kl~Dfg~ 828 (979)
.++||||+++++|.+++... ..+++.+++.++.|++.||+||| +++|+||||||+||+++.++. +||+|||+
T Consensus 89 -~~lv~e~~~~~~L~~~~~~~-~~~~~~~~~~~~~qi~~~l~~lH---~~~ivH~dlkp~NIl~~~~~~~~~~kl~Dfg~ 163 (322)
T 2ycf_A 89 -YYIVLELMEGGELFDKVVGN-KRLKEATCKLYFYQMLLAVQYLH---ENGIIHRDLKPENVLLSSQEEDCLIKITDFGH 163 (322)
T ss_dssp -EEEEEECCTTEETHHHHSTT-CCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEESSSSSSCCEEECCCTT
T ss_pred -eEEEEecCCCCcHHHHHhcc-CCCCHHHHHHHHHHHHHHHHHHH---HCCeeccCCCHHHEEEecCCCCCeEEEccCcc
Confidence 79999999999999988754 36899999999999999999999 999999999999999987654 99999999
Q ss_pred ccccCCCCCcceecccccCCCCCCccccC---CCCCCCchhHHHHHHHHHHHHcCCCCCcccccCcchHhHhhhhhcCCc
Q 002021 829 AKMLTGEDQSMIQTQTLATIGYMAPEYGR---EGRVSANGDVYSFGIMLMETFTGKKPTDEIFNGEMTLKHWVNDWLPIS 905 (979)
Q Consensus 829 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~---~~~~~~~~DvwslG~il~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~ 905 (979)
+....... ......||+.|+|||++. ...++.++||||+||++|||++|+.||........ ....+....
T Consensus 164 ~~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~-~~~~~~~~~--- 236 (322)
T 2ycf_A 164 SKILGETS---LMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVS-LKDQITSGK--- 236 (322)
T ss_dssp CEECCCCH---HHHHHHSCCTTCCHHHHHHTTTTTCTTHHHHHHHHHHHHHHHHSSCSSCSTTCSSC-HHHHHHHTC---
T ss_pred ceeccccc---ccccccCCcCccCchhhccCCCCCCCchhhHHHHHHHHHHHHhCCCCCcccchHHH-HHHHHHhCc---
Confidence 98764221 123456899999999863 56788999999999999999999999975332221 111111000
Q ss_pred cchhhcccccCchhhhhHHHHHHHHHHHHHHHhccccCcCCCCCHHHHHHH
Q 002021 906 TMEVVDANLLSQEDIHFVAKEQCVSFVFNLAMECTMEFPKQRINAKEIVTK 956 (979)
Q Consensus 906 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~eil~~ 956 (979)
..........++..+.+++.+||..||++||++.|+++|
T Consensus 237 ------------~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rps~~~~l~h 275 (322)
T 2ycf_A 237 ------------YNFIPEVWAEVSEKALDLVKKLLVVDPKARFTTEEALRH 275 (322)
T ss_dssp ------------CCCCHHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHTS
T ss_pred ------------cccCchhhhhcCHHHHHHHHHHcccCHhhCCCHHHHhhC
Confidence 000011223456779999999999999999999999864
No 238
>3an0_A Dual specificity mitogen-activated protein kinase; auto inhibition state, activation helix, serine/threonine-PR kinase; HET: ANK; 2.60A {Homo sapiens} PDB: 3vn9_A*
Probab=100.00 E-value=1.3e-37 Score=347.70 Aligned_cols=252 Identities=25% Similarity=0.322 Sum_probs=199.3
Q ss_pred hhCCCCCCceeeeecceEEEEEE-cCCCcEEEEEEeccccc-cchhcHHHHHHH-HHhcCCCCeeeEEEeeccCCeeEEE
Q 002021 680 ATDGFSENNLIGRGGFGSVYKAS-LGDGMEVAVKVFTSQCG-RAFKSFDVECEI-MKSIRHRNLIKVISSCSNEEFKALV 756 (979)
Q Consensus 680 ~~~~~~~~~~lG~G~~g~Vy~~~-~~~~~~vAvK~~~~~~~-~~~~~~~~E~~~-l~~l~h~niv~l~~~~~~~~~~~lv 756 (979)
..++|+..+.||+|+||.||+|. ..+|+.||||++..... .....+..|..+ ++.++||||+++++++.+++..++|
T Consensus 49 ~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~~~~~~~h~~iv~~~~~~~~~~~~~lv 128 (340)
T 3an0_A 49 KADDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYGALFREGDVWIC 128 (340)
T ss_dssp CSSCEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSCCCCHHHHHHHHHHHHHHTTCCCTTTCCEEEEEECSSCEEEE
T ss_pred ehhheeEeeEecccCCEEEEEEEEcCCCCEEEEEEeccccCcHHHHHHHHHHHHHHhhcCCCcEEEEeeEEEeCCcEEEE
Confidence 34678888999999999999995 46899999999875432 233445556555 7778999999999999999999999
Q ss_pred EEecCCCccceeecc---CCCCCCHHHHHHHHHHHHHHHHHHhcCCCC-CeEecCCCCCCEEeCCCCcEEEEeecccccc
Q 002021 757 LEYMPHGSLEKYLYS---SNCILDIFQRLNIMIDVASALEYLHFGYSA-PVIHCDLKPSNVLLDDNMVAHLSDFSIAKML 832 (979)
Q Consensus 757 ~E~~~~g~L~~~l~~---~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~-~i~H~Dik~~NIll~~~~~~kl~Dfg~~~~~ 832 (979)
|||+++ +|.+++.. ....+++..++.++.||+.||+||| ++ +|+||||||+||+++.++.+||+|||++...
T Consensus 129 ~e~~~~-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~lH---~~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~ 204 (340)
T 3an0_A 129 MELMDT-SLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLH---SKLSVIHRDVKPSNVLINALGQVKMCDFGISGYL 204 (340)
T ss_dssp ECCCSE-EHHHHHHHHHHTSCCCCHHHHHHHHHHHHHHHHHHH---HHTCCCCCSCCSTTEEECSTTCEEECCCSHHHHH
T ss_pred HHHhhC-cHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHh---hcCCeecCCCCHHHEEECCCCCEEEeeCCCceec
Confidence 999975 99888764 4557999999999999999999999 76 9999999999999999999999999999876
Q ss_pred CCCCCcceecccccCCCCCCccccC----CCCCCCchhHHHHHHHHHHHHcCCCCCcccccCcchHhHhhhhhcCCccch
Q 002021 833 TGEDQSMIQTQTLATIGYMAPEYGR----EGRVSANGDVYSFGIMLMETFTGKKPTDEIFNGEMTLKHWVNDWLPISTME 908 (979)
Q Consensus 833 ~~~~~~~~~~~~~gt~~y~aPE~~~----~~~~~~~~DvwslG~il~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~ 908 (979)
... .......||+.|+|||++. ...++.++|||||||++|||++|+.||.............+....+.
T Consensus 205 ~~~---~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~---- 277 (340)
T 3an0_A 205 VDS---VAKTIDAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSWGTPFQQLKQVVEEPSPQ---- 277 (340)
T ss_dssp SCH---HHHHHSSCCCCCCCHHHHSCCTTCCSCCHHHHHHHHHHHHHHHHHTSCSSCCCSCHHHHHHHHHHSCCCC----
T ss_pred ccc---cccccCCCCccccCccccccccccCCCCchhhHHHHHHHHHHHHHCCCCCccccchHHHHHHHhcCCCCC----
Confidence 322 1223357999999999864 34688999999999999999999999975322211222111110000
Q ss_pred hhcccccCchhhhhHHHHHHHHHHHHHHHhccccCcCCCCCHHHHHHH
Q 002021 909 VVDANLLSQEDIHFVAKEQCVSFVFNLAMECTMEFPKQRINAKEIVTK 956 (979)
Q Consensus 909 ~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~eil~~ 956 (979)
.....++.++.+++.+||+.||++|||+.|+++|
T Consensus 278 --------------~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~h 311 (340)
T 3an0_A 278 --------------LPADKFSAEFVDFTSQCLKKNSKERPTYPELMQH 311 (340)
T ss_dssp --------------CCGGGSCHHHHHHHHHHTCSSGGGSCCHHHHTTS
T ss_pred --------------CCcccCCHHHHHHHHHHccCCcccCcCHHHHhcC
Confidence 0112345679999999999999999999999885
No 239
>1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=1.1e-37 Score=350.89 Aligned_cols=263 Identities=24% Similarity=0.287 Sum_probs=195.8
Q ss_pred hCCCCCCceeeeecceEEEEEE-cCCCcEEEEEEecccc--ccchhcHHHHHHHHHhcCCCCeeeEEEeeccCC------
Q 002021 681 TDGFSENNLIGRGGFGSVYKAS-LGDGMEVAVKVFTSQC--GRAFKSFDVECEIMKSIRHRNLIKVISSCSNEE------ 751 (979)
Q Consensus 681 ~~~~~~~~~lG~G~~g~Vy~~~-~~~~~~vAvK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~------ 751 (979)
.+.|+..+.||+|+||.||+|. ..+|+.||||++.... ....+.+.+|+++++.++||||+++++++...+
T Consensus 24 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~~~~ 103 (367)
T 1cm8_A 24 RAVYRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENVIGLLDVFTPDETLDDFT 103 (367)
T ss_dssp BSSEEEEEEC------CEEEEEETTTCCEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCBTTBCCCSEEECSCSSTTTCC
T ss_pred cceEEEeEEeeecCCeEEEEEEECCCCCEEEEEEeCccccCHHHHHHHHHHHHHHHhCCCcCCCCceeeEecCCccccCc
Confidence 4678889999999999999995 4679999999986432 223467889999999999999999999987653
Q ss_pred eeEEEEEecCCCccceeeccCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCEEeCCCCcEEEEeeccccc
Q 002021 752 FKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFSIAKM 831 (979)
Q Consensus 752 ~~~lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~i~H~Dik~~NIll~~~~~~kl~Dfg~~~~ 831 (979)
..|+||||+ +++|.+++... .+++..+..++.|+++||+||| +++|+||||||+||+++.++.+||+|||+++.
T Consensus 104 ~~~lv~e~~-~~~L~~~~~~~--~l~~~~~~~~~~qi~~~L~~LH---~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~ 177 (367)
T 1cm8_A 104 DFYLVMPFM-GTDLGKLMKHE--KLGEDRIQFLVYQMLKGLRYIH---AAGIIHRDLKPGNLAVNEDCELKILDFGLARQ 177 (367)
T ss_dssp CCEEEEECC-SEEHHHHHHHC--CCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEECTTCCEEECCCTTCEE
T ss_pred eEEEEEecC-CCCHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHH---HCCccccCcCHHHEEEcCCCCEEEEeeecccc
Confidence 469999999 78999998763 5899999999999999999999 99999999999999999999999999999987
Q ss_pred cCCCCCcceecccccCCCCCCccccCC-CCCCCchhHHHHHHHHHHHHcCCCCCcccccCcchHhHhhhhhcCCccchhh
Q 002021 832 LTGEDQSMIQTQTLATIGYMAPEYGRE-GRVSANGDVYSFGIMLMETFTGKKPTDEIFNGEMTLKHWVNDWLPISTMEVV 910 (979)
Q Consensus 832 ~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwslG~il~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~ 910 (979)
.... .....+|+.|+|||++.+ ..++.++||||+||++|||++|+.||...... ..+....... .....+..
T Consensus 178 ~~~~-----~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~-~~l~~i~~~~-g~~~~~~~ 250 (367)
T 1cm8_A 178 ADSE-----MTGYVVTRWYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGKTLFKGSDHL-DQLKEIMKVT-GTPPAEFV 250 (367)
T ss_dssp CCSS-----CCSSCSCGGGCCTHHHHTTTCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHH-HHHHHHHHHH-CCCCHHHH
T ss_pred cccc-----cCcCcCCCCcCCHHHHhCCCCCChhhhHHHHHHHHHHHHhCCCCCCCCCHH-HHHHHHHHhc-CCCCHHHH
Confidence 5322 234578999999998876 67999999999999999999999999753211 1111111100 00000000
Q ss_pred cc-----------cccCchhh-hhHHHHHHHHHHHHHHHhccccCcCCCCCHHHHHHH
Q 002021 911 DA-----------NLLSQEDI-HFVAKEQCVSFVFNLAMECTMEFPKQRINAKEIVTK 956 (979)
Q Consensus 911 ~~-----------~~~~~~~~-~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~eil~~ 956 (979)
.. ........ .......+++.+.+++.+|++.||++|||+.|+++|
T Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~mL~~dP~~R~t~~e~l~h 308 (367)
T 1cm8_A 251 QRLQSDEAKNYMKGLPELEKKDFASILTNASPLAVNLLEKMLVLDAEQRVTAGEALAH 308 (367)
T ss_dssp HTCSCHHHHHHHHHSCCCCCCCGGGTCTTCCHHHHHHHHHHSCSSTTTSCCHHHHHHS
T ss_pred HHhhhHHHHHHHHhCCCCCCCCHHHHCCCCCHHHHHHHHHHccCChhHCCCHHHHhcC
Confidence 00 00000000 001112446779999999999999999999999986
No 240
>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A*
Probab=100.00 E-value=2.7e-38 Score=357.31 Aligned_cols=254 Identities=12% Similarity=0.108 Sum_probs=183.7
Q ss_pred CCCCCCceeeeecceEEEEEE-cCCCcEEEEEEeccccc---cchhcHHHHHHHHHhc--CCCCeeeEEE-------eec
Q 002021 682 DGFSENNLIGRGGFGSVYKAS-LGDGMEVAVKVFTSQCG---RAFKSFDVECEIMKSI--RHRNLIKVIS-------SCS 748 (979)
Q Consensus 682 ~~~~~~~~lG~G~~g~Vy~~~-~~~~~~vAvK~~~~~~~---~~~~~~~~E~~~l~~l--~h~niv~l~~-------~~~ 748 (979)
..|+..+.||+|+||.||+|. ..+|+.||||++..... ...+.+.+|+++++.+ +||||++++. ++.
T Consensus 62 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~~~~l~~~hp~iv~~~~~~~~p~d~~~ 141 (371)
T 3q60_A 62 RKLKLVEPLRVGDRSVVFLVRDVERLEDFALKVFTMGAENSRSELERLHEATFAAARLLGESPEEARDRRRLLLPSDAVA 141 (371)
T ss_dssp EEEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEECCSTTHHHHHHHHHHHHHHHHHHHC----------CBCCCCEEEE
T ss_pred eeeeeeeeccCCCCEEEEEEEECCCCceeEEEEEEecccccccHHHHHHHHHHHHHHhcccChhhhhhceeEEeeehhee
Confidence 457888999999999999996 45899999999976532 2345677886555555 6999888653 332
Q ss_pred cC-----------------CeeEEEEEecCCCccceeeccCCCCCCHHHH------HHHHHHHHHHHHHHhcCCCCCeEe
Q 002021 749 NE-----------------EFKALVLEYMPHGSLEKYLYSSNCILDIFQR------LNIMIDVASALEYLHFGYSAPVIH 805 (979)
Q Consensus 749 ~~-----------------~~~~lv~E~~~~g~L~~~l~~~~~~l~~~~~------~~i~~~ia~~L~~LH~~~~~~i~H 805 (979)
.+ ...++||||++ |+|.+++...+..+++..+ ..++.||++||+||| +++|+|
T Consensus 142 ~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~~~~~~~~~~~~~~vk~~i~~qi~~aL~~LH---~~~ivH 217 (371)
T 3q60_A 142 VQSQPPFAQLSPGQDDYAVANYLLLMPAAS-VDLELLFSTLDFVYVFRGDEGILALHILTAQLIRLAANLQ---SKGLVH 217 (371)
T ss_dssp ETTSCSSSBCSCC---CCEEEEEEEECCCS-EEHHHHHHHHHHSCCCCHHHHHHHHHHHHHHHHHHHHHHH---HTTEEE
T ss_pred cCCCCCeeeccCCcccceeeeEEEEecCCC-CCHHHHHHHhccccchhhhhhhhhHHHHHHHHHHHHHHHH---HCCCcc
Confidence 22 34799999998 8999999875444555566 788899999999999 999999
Q ss_pred cCCCCCCEEeCCCCcEEEEeeccccccCCCCCcceecccccCCCCCCccccCC--CCCCCchhHHHHHHHHHHHHcCCCC
Q 002021 806 CDLKPSNVLLDDNMVAHLSDFSIAKMLTGEDQSMIQTQTLATIGYMAPEYGRE--GRVSANGDVYSFGIMLMETFTGKKP 883 (979)
Q Consensus 806 ~Dik~~NIll~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~~~DvwslG~il~el~tg~~P 883 (979)
|||||+||+++.++.+||+|||+++..... .....+|+.|+|||++.+ ..++.++||||+||++|||++|+.|
T Consensus 218 rDikp~NIll~~~~~~kL~DFG~a~~~~~~-----~~~~~~t~~y~aPE~~~~~~~~~~~~~DiwSlG~il~elltg~~P 292 (371)
T 3q60_A 218 GHFTPDNLFIMPDGRLMLGDVSALWKVGTR-----GPASSVPVTYAPREFLNASTATFTHALNAWQLGLSIYRVWCLFLP 292 (371)
T ss_dssp TTCSGGGEEECTTSCEEECCGGGEEETTCE-----EEGGGSCGGGCCHHHHTCSEEECCHHHHHHHHHHHHHHHHHSSCS
T ss_pred CcCCHHHEEECCCCCEEEEecceeeecCCC-----ccCccCCcCCcChhhccCCCCCcCccccHHHHHHHHHHHHhCCCC
Confidence 999999999999999999999999865321 124557799999999987 6799999999999999999999999
Q ss_pred CcccccCcchHhHhhhhhcCCccchhhcccccCchhhhhHHHHHHHHHHHHHHHhccccCcCCCCCHHHHHHH
Q 002021 884 TDEIFNGEMTLKHWVNDWLPISTMEVVDANLLSQEDIHFVAKEQCVSFVFNLAMECTMEFPKQRINAKEIVTK 956 (979)
Q Consensus 884 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~eil~~ 956 (979)
|.......... |..... . .........+....+++.+.+++.+||+.||++|||+.|+++|
T Consensus 293 f~~~~~~~~~~--~~~~~~----~------~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~h 353 (371)
T 3q60_A 293 FGLVTPGIKGS--WKRPSL----R------VPGTDSLAFGSCTPLPDFVKTLIGRFLNFDRRRRLLPLEAMET 353 (371)
T ss_dssp TTBCCTTCTTC--CCBCCT----T------SCCCCSCCCTTSSCCCHHHHHHHHHHTCSSTTTCCCHHHHTTS
T ss_pred CCCcCcccccc--hhhhhh----h------hccccccchhhccCCCHHHHHHHHHHcCCChhhCCCHHHHhcC
Confidence 98653321110 000000 0 0000011111123456779999999999999999999999864
No 241
>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A*
Probab=100.00 E-value=2.7e-38 Score=342.66 Aligned_cols=254 Identities=21% Similarity=0.279 Sum_probs=202.4
Q ss_pred hCCCCCCceeeeecceEEEEEEc-CCCcEEEEEEecccc--ccchhcHHHHHHHHHhcCCCCeeeEEEee--ccCCeeEE
Q 002021 681 TDGFSENNLIGRGGFGSVYKASL-GDGMEVAVKVFTSQC--GRAFKSFDVECEIMKSIRHRNLIKVISSC--SNEEFKAL 755 (979)
Q Consensus 681 ~~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vAvK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~--~~~~~~~l 755 (979)
.++|+..+.||+|+||.||+|.. .+++.||+|++.... ....+.+.+|++++++++||||+++++++ ......++
T Consensus 5 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~l 84 (279)
T 2w5a_A 5 AEDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDRIIDRTNTTLYI 84 (279)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEECTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEEGGGTEEEE
T ss_pred hhheeeehhccCCCCcEEEEEEECCCCcEEEEEEEEcccCCHHHHHHHHHHHHHHHhcCCCCCCeEEEEEecCCCceEEE
Confidence 36788899999999999999954 578999999987543 23456788999999999999999999987 44678899
Q ss_pred EEEecCCCccceeeccC---CCCCCHHHHHHHHHHHHHHHHHHhcCCCCC-----eEecCCCCCCEEeCCCCcEEEEeec
Q 002021 756 VLEYMPHGSLEKYLYSS---NCILDIFQRLNIMIDVASALEYLHFGYSAP-----VIHCDLKPSNVLLDDNMVAHLSDFS 827 (979)
Q Consensus 756 v~E~~~~g~L~~~l~~~---~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~-----i~H~Dik~~NIll~~~~~~kl~Dfg 827 (979)
||||+++++|.+++... ...+++..++.++.|++.||+||| +.+ |+||||||+||+++.++.+||+|||
T Consensus 85 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH---~~~~~~~~ivH~dl~p~NIl~~~~~~~kl~dfg 161 (279)
T 2w5a_A 85 VMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECH---RRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFG 161 (279)
T ss_dssp EEECCTTEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHH---HHC------CCCCCSGGGEEECSSSCEEECCCC
T ss_pred EEeCCCCCCHHHHHHhhcccCCCCCHHHHHHHHHHHHHHHHHHh---cccCCCCeeEEeccchhhEEEcCCCCEEEecCc
Confidence 99999999999998753 335899999999999999999999 777 9999999999999999999999999
Q ss_pred cccccCCCCCcceecccccCCCCCCccccCCCCCCCchhHHHHHHHHHHHHcCCCCCcccccCcchHhHhhhhhcCCccc
Q 002021 828 IAKMLTGEDQSMIQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFTGKKPTDEIFNGEMTLKHWVNDWLPISTM 907 (979)
Q Consensus 828 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~ 907 (979)
.+........ ......||+.|+|||.+.+..++.++||||+|+++|||++|+.||...... .....+.....
T Consensus 162 ~~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~--~~~~~i~~~~~---- 233 (279)
T 2w5a_A 162 LARILNHDTS--FAKTFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQK--ELAGKIREGKF---- 233 (279)
T ss_dssp HHHHC---CH--HHHHHHSCCTTCCHHHHHCC-CCHHHHHHHHHHHHHHHHHSSCSSCCSSHH--HHHHHHHHTCC----
T ss_pred hheeeccccc--cccccCCCccccChHHhccCCCCchhhHHHHHHHHHHHHHCCCCCcccCHH--HHHHHHhhccc----
Confidence 9987643221 123456899999999998888999999999999999999999998753211 11111110000
Q ss_pred hhhcccccCchhhhhHHHHHHHHHHHHHHHhccccCcCCCCCHHHHHHHHHH
Q 002021 908 EVVDANLLSQEDIHFVAKEQCVSFVFNLAMECTMEFPKQRINAKEIVTKLLK 959 (979)
Q Consensus 908 ~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~eil~~L~~ 959 (979)
. ..+..++.++.+++.+||+.||++|||+.|+++++..
T Consensus 234 --------~------~~~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~~~~ 271 (279)
T 2w5a_A 234 --------R------RIPYRYSDELNEIITRMLNLKDYHRPSVEEILENPLI 271 (279)
T ss_dssp --------C------CCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHTSTTC
T ss_pred --------c------cCCcccCHHHHHHHHHHcCCCcccCCCHHHHHhChhh
Confidence 0 0112345678999999999999999999999987643
No 242
>2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A*
Probab=100.00 E-value=1.3e-37 Score=336.66 Aligned_cols=248 Identities=26% Similarity=0.363 Sum_probs=195.8
Q ss_pred hCCCCCCceeeeecceEEEEEEc-CCCcEEEEEEecccc---ccchhcHHHHHHHHHhcCCCCeeeEEEeeccCCeeEEE
Q 002021 681 TDGFSENNLIGRGGFGSVYKASL-GDGMEVAVKVFTSQC---GRAFKSFDVECEIMKSIRHRNLIKVISSCSNEEFKALV 756 (979)
Q Consensus 681 ~~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vAvK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 756 (979)
.++|+..+.||+|+||.||+|.. .+|+.||||++.... ....+.+.+|+++++.++||||+++++++.+++..++|
T Consensus 10 ~~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 89 (276)
T 2h6d_A 10 IGHYVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKLYQVISTPTDFFMV 89 (276)
T ss_dssp ETTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEE
T ss_pred eccEEEEeeecCCCCeEEEEEEECCCCceEEEEEeccccccchhHHHHHHHHHHHHhcCCCCCEeEEEEEEecCCeEEEE
Confidence 36788899999999999999965 479999999986542 23346788999999999999999999999999999999
Q ss_pred EEecCCCccceeeccCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCEEeCCCCcEEEEeeccccccCCCC
Q 002021 757 LEYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFSIAKMLTGED 836 (979)
Q Consensus 757 ~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~i~H~Dik~~NIll~~~~~~kl~Dfg~~~~~~~~~ 836 (979)
|||+++++|.+++.... .+++.++..++.|++.|++||| +++|+||||||+||+++.++.+||+|||.+.......
T Consensus 90 ~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dl~p~Nil~~~~~~~~l~dfg~~~~~~~~~ 165 (276)
T 2h6d_A 90 MEYVSGGELFDYICKHG-RVEEMEARRLFQQILSAVDYCH---RHMVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGE 165 (276)
T ss_dssp EECCCSCBHHHHHHHHC-SCCHHHHHHHHHHHHHHHHHHH---HHCSSCCCCCGGGEEECTTSCEEECCCCGGGCCCC--
T ss_pred EeccCCCcHHHHHhccC-CCCHHHHHHHHHHHHHHHHHHH---HCCCccCCCChhhEEECCCCCEEEeecccccccCCCc
Confidence 99999999999987653 5899999999999999999999 8999999999999999999999999999998764322
Q ss_pred CcceecccccCCCCCCccccCCCCC-CCchhHHHHHHHHHHHHcCCCCCcccccCcchHhHhhhhhcCCccchhhccccc
Q 002021 837 QSMIQTQTLATIGYMAPEYGREGRV-SANGDVYSFGIMLMETFTGKKPTDEIFNGEMTLKHWVNDWLPISTMEVVDANLL 915 (979)
Q Consensus 837 ~~~~~~~~~gt~~y~aPE~~~~~~~-~~~~DvwslG~il~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 915 (979)
......+++.|+|||.+.+..+ ++++||||+|+++|||++|+.||...... .....+... ..
T Consensus 166 ---~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~--~~~~~~~~~------------~~ 228 (276)
T 2h6d_A 166 ---FLRTSCGSPNYAAPEVISGRLYAGPEVDIWSCGVILYALLCGTLPFDDEHVP--TLFKKIRGG------------VF 228 (276)
T ss_dssp --------------CCTGGGTTSCCCHHHHHHHHHHHHHHHHHHSSCSSCCSSHH--HHHHHHHHC------------CC
T ss_pred ---ceecccCCccccCHHHHcCCCCCCccchHHHHHHHHHHHHhCCCCCCCCcHH--HHHHHhhcC------------cc
Confidence 1234568999999999887665 68999999999999999999998652111 111100000 00
Q ss_pred CchhhhhHHHHHHHHHHHHHHHhccccCcCCCCCHHHHHHH
Q 002021 916 SQEDIHFVAKEQCVSFVFNLAMECTMEFPKQRINAKEIVTK 956 (979)
Q Consensus 916 ~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~eil~~ 956 (979)
..+..++..+.+++.+|++.||++|||+.|+++|
T Consensus 229 -------~~~~~~~~~l~~li~~~l~~~p~~Rps~~~~l~h 262 (276)
T 2h6d_A 229 -------YIPEYLNRSVATLLMHMLQVDPLKRATIKDIREH 262 (276)
T ss_dssp -------CCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHS
T ss_pred -------cCchhcCHHHHHHHHHHccCChhhCCCHHHHHhC
Confidence 0112234568899999999999999999999986
No 243
>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens}
Probab=100.00 E-value=4.2e-38 Score=348.32 Aligned_cols=273 Identities=20% Similarity=0.281 Sum_probs=201.7
Q ss_pred hhCCCCCCceeeeecceEEEEEEcCCCcEEEEEEecccc--ccchhcHHHHHHHHHhcCCCCeeeEEEeeccCCeeEEEE
Q 002021 680 ATDGFSENNLIGRGGFGSVYKASLGDGMEVAVKVFTSQC--GRAFKSFDVECEIMKSIRHRNLIKVISSCSNEEFKALVL 757 (979)
Q Consensus 680 ~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~vAvK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 757 (979)
..++|+..+.||+|+||.||+|...+ .||+|++.... ....+.+.+|++++++++||||+++++++.+++..++||
T Consensus 31 ~~~~~~~~~~lg~G~~g~V~~~~~~~--~~avk~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~iv~ 108 (319)
T 2y4i_B 31 PFEQLEIGELIGKGRFGQVYHGRWHG--EVAIRLIDIERDNEDQLKAFKREVMAYRQTRHENVVLFMGACMSPPHLAIIT 108 (319)
T ss_dssp CCSCEECCCBCCCSSSSEEEEEEESS--SEEEEECCCCSCCCCCCCCCCTTGGGGTTCCCTTBCCCCEEEECSSCEEEEC
T ss_pred CHHHeEEeeEeccCCceEEEEEEEcC--eEEEEEeecCCCCHHHHHHHHHHHHHHhcCCCCCEeEEEEEEecCCceEEEe
Confidence 35788999999999999999997743 49999986542 234567788999999999999999999999999999999
Q ss_pred EecCCCccceeeccCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCEEeCCCCcEEEEeeccccccCCCC-
Q 002021 758 EYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFSIAKMLTGED- 836 (979)
Q Consensus 758 E~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~i~H~Dik~~NIll~~~~~~kl~Dfg~~~~~~~~~- 836 (979)
||+++++|.+++...+..+++.+++.++.|++.|++||| +++|+||||||+||+++ ++.+||+|||++.......
T Consensus 109 e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH---~~~i~H~dlkp~NIl~~-~~~~~l~Dfg~~~~~~~~~~ 184 (319)
T 2y4i_B 109 SLCKGRTLYSVVRDAKIVLDVNKTRQIAQEIVKGMGYLH---AKGILHKDLKSKNVFYD-NGKVVITDFGLFSISGVLQA 184 (319)
T ss_dssp BCCCSEEHHHHTTSSCCCCCSHHHHHHHHHHHHHHHHHH---HTTCCCCCCCSTTEEEC---CCEECCCSCCC-------
T ss_pred ecccCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH---hCCccccCCChhhEEEe-CCCEEEeecCCccccccccc
Confidence 999999999999887767999999999999999999999 99999999999999998 6799999999987543211
Q ss_pred --CcceecccccCCCCCCccccCC---------CCCCCchhHHHHHHHHHHHHcCCCCCcccccCcchHhHhhhhhcCCc
Q 002021 837 --QSMIQTQTLATIGYMAPEYGRE---------GRVSANGDVYSFGIMLMETFTGKKPTDEIFNGEMTLKHWVNDWLPIS 905 (979)
Q Consensus 837 --~~~~~~~~~gt~~y~aPE~~~~---------~~~~~~~DvwslG~il~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~ 905 (979)
.........||+.|+|||.+.+ ..++.++||||||+++|||++|+.||........ .........+
T Consensus 185 ~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~-~~~~~~~~~~-- 261 (319)
T 2y4i_B 185 GRREDKLRIQNGWLCHLAPEIIRQLSPDTEEDKLPFSKHSDVFALGTIWYELHAREWPFKTQPAEAI-IWQMGTGMKP-- 261 (319)
T ss_dssp ---CCSCBCCSGGGGTSCHHHHSCBSCC--CCCSCCCHHHHHHHHHHHHHHHHHSSCSSSSCCHHHH-HHHHHTTCCC--
T ss_pred cccccccccCCCcccccChHHhhhccccccccccCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHH-HHHhccCCCC--
Confidence 1112234468899999998764 3578899999999999999999999975322111 1110000000
Q ss_pred cchhhcccccCchhhhhHHHHHHHHHHHHHHHhccccCcCCCCCHHHHHHHHHHhHHhhccCCCCcceeccC
Q 002021 906 TMEVVDANLLSQEDIHFVAKEQCVSFVFNLAMECTMEFPKQRINAKEIVTKLLKIRDSLLRNVGGRCVRQSN 977 (979)
Q Consensus 906 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~eil~~L~~~~~~~~~~~~~~~~~~~~ 977 (979)
.. ....++.++.+++.+||..||++|||+.|+++.|+++.+.........-.|+++
T Consensus 262 -------~~---------~~~~~~~~l~~li~~~l~~~p~~Rpt~~~l~~~l~~l~~~~~~~~~~~~~~~~~ 317 (319)
T 2y4i_B 262 -------NL---------SQIGMGKEISDILLFCWAFEQEERPTFTKLMDMLEKLPKRNRRLSHPGHFWKSA 317 (319)
T ss_dssp -------CC---------CCSSCCTTHHHHHHHHHCSSTTTSCCHHHHHHHHTTC-----------------
T ss_pred -------CC---------CcCCCCHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHHHhhccCCCCccccccc
Confidence 00 001234558899999999999999999999999999998776665555556554
No 244
>2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A*
Probab=100.00 E-value=5.8e-38 Score=344.41 Aligned_cols=264 Identities=22% Similarity=0.306 Sum_probs=188.0
Q ss_pred HhhCCCCCCceeeeecceEEEEEEc-CCCcEEEEEEecccc-ccchhcHHHHHHHHHhcCCCCeeeEEEeeccCCeeEEE
Q 002021 679 RATDGFSENNLIGRGGFGSVYKASL-GDGMEVAVKVFTSQC-GRAFKSFDVECEIMKSIRHRNLIKVISSCSNEEFKALV 756 (979)
Q Consensus 679 ~~~~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vAvK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 756 (979)
...++|+..+.||+|+||.||+|.. .+++.||||++.... ....+.+.+|++++++++||||+++++++..++..++|
T Consensus 12 i~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 91 (303)
T 2vwi_A 12 INRDDYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPNIVSYYTSFVVKDELWLV 91 (303)
T ss_dssp -CCCCCEEEEECC---CCCEEEEEC----CEEEEECCC----------------CCCCCCCTTBCCEEEEEESSSCEEEE
T ss_pred cchhhhhhhheeccccceEEEEEEECCCCcEEEEEEEEhhhcchhHHHHHHHHHHHhhcCCCCEeeEEEEEeecCCcEEE
Confidence 3457899999999999999999964 478999999986442 33456788899999999999999999999999999999
Q ss_pred EEecCCCccceeecc-------CCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCEEeCCCCcEEEEeeccc
Q 002021 757 LEYMPHGSLEKYLYS-------SNCILDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFSIA 829 (979)
Q Consensus 757 ~E~~~~g~L~~~l~~-------~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~i~H~Dik~~NIll~~~~~~kl~Dfg~~ 829 (979)
|||+++++|.+++.. ....+++..++.++.|++.|++||| +++|+||||||+||+++.++.+||+|||.+
T Consensus 92 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH---~~~i~H~dl~p~Nil~~~~~~~kl~dfg~~ 168 (303)
T 2vwi_A 92 MKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLH---KNGQIHRDVKAGNILLGEDGSVQIADFGVS 168 (303)
T ss_dssp EECCTTCBHHHHHHHHHHTTTTTTCSSCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCSGGGEEECTTCCEEECCCHHH
T ss_pred ehhccCCchHHHHHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHH---hCCCCCCCCChhhEEEcCCCCEEEEeccch
Confidence 999999999999864 2446899999999999999999999 899999999999999999999999999999
Q ss_pred cccCCCCC---cceecccccCCCCCCccccCC-CCCCCchhHHHHHHHHHHHHcCCCCCcccccCcchHhHhhhhhcCCc
Q 002021 830 KMLTGEDQ---SMIQTQTLATIGYMAPEYGRE-GRVSANGDVYSFGIMLMETFTGKKPTDEIFNGEMTLKHWVNDWLPIS 905 (979)
Q Consensus 830 ~~~~~~~~---~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwslG~il~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~ 905 (979)
........ ........||+.|+|||.+.+ ..++.++||||+|+++|||++|+.||......+..... .....+..
T Consensus 169 ~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~-~~~~~~~~ 247 (303)
T 2vwi_A 169 AFLATGGDITRNKVRKTFVGTPCWMAPEVMEQVRGYDFKADIWSFGITAIELATGAAPYHKYPPMKVLMLT-LQNDPPSL 247 (303)
T ss_dssp HHCC---------------CCCTTCCHHHHHHHHCCCTHHHHHHHHHHHHHHHHSSCTTTTSCGGGHHHHH-HTSSCCCT
T ss_pred heeccCCCccchhhhcccCCCccccCHHHhccccCCCchhhHHHHHHHHHHHHhCCCCCccCchhhHHHHH-hccCCCcc
Confidence 76543221 111234568999999998865 56899999999999999999999999764322211111 11110000
Q ss_pred cchhhcccccCchhhhhHHHHHHHHHHHHHHHhccccCcCCCCCHHHHHHH
Q 002021 906 TMEVVDANLLSQEDIHFVAKEQCVSFVFNLAMECTMEFPKQRINAKEIVTK 956 (979)
Q Consensus 906 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~eil~~ 956 (979)
.....+.. ....++..+.+++.+||+.||++|||+.|+++|
T Consensus 248 ~~~~~~~~----------~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~h 288 (303)
T 2vwi_A 248 ETGVQDKE----------MLKKYGKSFRKMISLCLQKDPEKRPTAAELLRH 288 (303)
T ss_dssp TC-----C----------CCCCCCHHHHHHHHHHCCSSGGGSCCHHHHHTS
T ss_pred ccccccch----------hhhhhhHHHHHHHHHHccCChhhCcCHHHHhhC
Confidence 00000100 112345668999999999999999999999985
No 245
>3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3v01_A* 3v04_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* ...
Probab=100.00 E-value=3.9e-38 Score=354.71 Aligned_cols=265 Identities=21% Similarity=0.313 Sum_probs=203.7
Q ss_pred CCCCCCceeeeecceEEEEEEc-CCCcEEEEEEecccc-ccchhcHHHHHHHHHhcCCCCeeeEEEeeccCCeeEEEEEe
Q 002021 682 DGFSENNLIGRGGFGSVYKASL-GDGMEVAVKVFTSQC-GRAFKSFDVECEIMKSIRHRNLIKVISSCSNEEFKALVLEY 759 (979)
Q Consensus 682 ~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vAvK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~E~ 759 (979)
++|+..+.||+|+||.||+|.. .+++.||+|++.... ....+.+.+|+++++.++||||+++++++.+++..++||||
T Consensus 33 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 112 (360)
T 3eqc_A 33 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEH 112 (360)
T ss_dssp GGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEECCCCHHHHHHHHHHHGGGGGCCCTTBCCEEEEEEETTEEEEEECC
T ss_pred ccceeeeeecCCCCeEEEEEEECCCCcEEEEEEeccccCHHHHHHHHHHHHHHHHCCCCCEEEEeEEEEECCEEEEEEEC
Confidence 5688899999999999999954 478999999987553 23356788999999999999999999999999999999999
Q ss_pred cCCCccceeeccCCCCCCHHHHHHHHHHHHHHHHHHhcCCCC-CeEecCCCCCCEEeCCCCcEEEEeeccccccCCCCCc
Q 002021 760 MPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGYSA-PVIHCDLKPSNVLLDDNMVAHLSDFSIAKMLTGEDQS 838 (979)
Q Consensus 760 ~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~-~i~H~Dik~~NIll~~~~~~kl~Dfg~~~~~~~~~~~ 838 (979)
+++++|.+++...+ .+++..+..++.|++.|++||| +. +|+||||||+||+++.++.+||+|||++......
T Consensus 113 ~~~~~L~~~l~~~~-~~~~~~~~~i~~~i~~~l~~lh---~~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~--- 185 (360)
T 3eqc_A 113 MDGGSLDQVLKKAG-RIPEQILGKVSIAVIKGLTYLR---EKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS--- 185 (360)
T ss_dssp CTTCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHH---HHHCCCCSCCSGGGEEECTTCCEEECCCCCCHHHHHH---
T ss_pred CCCCCHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHH---HhCCEEcCCccHHHEEECCCCCEEEEECCCCcccccc---
Confidence 99999999987653 5899999999999999999999 75 9999999999999999999999999999765322
Q ss_pred ceecccccCCCCCCccccCCCCCCCchhHHHHHHHHHHHHcCCCCCcccccCcchHhHhh--h-----------------
Q 002021 839 MIQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFTGKKPTDEIFNGEMTLKHWV--N----------------- 899 (979)
Q Consensus 839 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~tg~~P~~~~~~~~~~~~~~~--~----------------- 899 (979)
......||+.|+|||++.+..++.++||||+||++|||++|+.||......+....... .
T Consensus 186 -~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 264 (360)
T 3eqc_A 186 -MANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQVEGDAAETPPRPRTPGRPL 264 (360)
T ss_dssp -C----CCCCTTCCHHHHTTCCCSHHHHHHHHHHHHHHHHHTSCCSSCCCHHHHHHHHC---------------------
T ss_pred -cccCCCCCCCeECHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHhcccccccCCCCCCCcccCCCcc
Confidence 12345789999999999999999999999999999999999999975322111100000 0
Q ss_pred ------hhcCCccchhhcccccCchhhhhHHHHHHHHHHHHHHHhccccCcCCCCCHHHHHHH
Q 002021 900 ------DWLPISTMEVVDANLLSQEDIHFVAKEQCVSFVFNLAMECTMEFPKQRINAKEIVTK 956 (979)
Q Consensus 900 ------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~eil~~ 956 (979)
........+..+...... ........++.++.+++.+||+.||++|||+.|+++|
T Consensus 265 ~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 325 (360)
T 3eqc_A 265 NKFGMDSRPPMAIFELLDYIVNEP--PPKLPSGVFSLEFQDFVNKCLIKNPAERADLKQLMVH 325 (360)
T ss_dssp ---------CCCHHHHHHHHHHSC--CCCCCTTTSCHHHHHHHHHHHCSSTTTSCCHHHHHTS
T ss_pred cccccCCCCcccchhhhhHHhccC--CCCCCcccccHHHHHHHHHHhhcChhhCCCHHHHhhC
Confidence 000000000000000000 0000112245679999999999999999999999987
No 246
>2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens}
Probab=100.00 E-value=3e-37 Score=339.08 Aligned_cols=251 Identities=20% Similarity=0.288 Sum_probs=198.8
Q ss_pred hCCCCCCceeeeecceEEEEEEc-CCCcEEEEEEecccc----ccchhcHHHHHHHHHhcCCCCeeeEEEee--ccCCee
Q 002021 681 TDGFSENNLIGRGGFGSVYKASL-GDGMEVAVKVFTSQC----GRAFKSFDVECEIMKSIRHRNLIKVISSC--SNEEFK 753 (979)
Q Consensus 681 ~~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vAvK~~~~~~----~~~~~~~~~E~~~l~~l~h~niv~l~~~~--~~~~~~ 753 (979)
.++|+..+.||+|+||.||+|.. .+++.||||++.... ....+.+.+|+++++.++||||+++++++ .+....
T Consensus 4 ~~~y~i~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~ 83 (305)
T 2wtk_C 4 IGKYLMGDLLGEGSYGKVKEVLDSETLCRRAVKILKKKKLRRIPNGEANVKKEIQLLRRLRHKNVIQLVDVLYNEEKQKM 83 (305)
T ss_dssp -CCBCCCCEEEECSSCEEEEEEBTTTCCEEEEEEECHHHHHHSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEECC---CE
T ss_pred ccceeEeeEEecCCCeEEEEEEECCCCcEEEEEEeccccccccchhHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCCCeE
Confidence 47899999999999999999954 578999999986542 23456788999999999999999999988 455688
Q ss_pred EEEEEecCCCccceeeccC-CCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCEEeCCCCcEEEEeecccccc
Q 002021 754 ALVLEYMPHGSLEKYLYSS-NCILDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFSIAKML 832 (979)
Q Consensus 754 ~lv~E~~~~g~L~~~l~~~-~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~i~H~Dik~~NIll~~~~~~kl~Dfg~~~~~ 832 (979)
++||||++++ +.+++... ...+++..++.++.|++.||+||| +++|+||||||+||+++.++.+||+|||.+...
T Consensus 84 ~lv~e~~~~~-l~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH---~~~i~H~dlkp~NIl~~~~~~~kl~dfg~~~~~ 159 (305)
T 2wtk_C 84 YMVMEYCVCG-MQEMLDSVPEKRFPVCQAHGYFCQLIDGLEYLH---SQGIVHKDIKPGNLLLTTGGTLKISALGVAEAL 159 (305)
T ss_dssp EEEEECCSEE-HHHHHHHSTTCSCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECTTCCEEECCCTTCEEC
T ss_pred EEEehhccCC-HHHHHHhCcccccCHHHHHHHHHHHHHHHHHHH---HCCeeecCCCcccEEEcCCCcEEeecccccccc
Confidence 9999999876 66665543 456899999999999999999999 999999999999999999999999999999876
Q ss_pred CCCCCcceecccccCCCCCCccccCCCC--CCCchhHHHHHHHHHHHHcCCCCCcccccCcchHhHhhhhhcCCccchhh
Q 002021 833 TGEDQSMIQTQTLATIGYMAPEYGREGR--VSANGDVYSFGIMLMETFTGKKPTDEIFNGEMTLKHWVNDWLPISTMEVV 910 (979)
Q Consensus 833 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~--~~~~~DvwslG~il~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~ 910 (979)
.............||+.|+|||++.+.. ++.++||||+|+++|||++|+.||...... .....+...
T Consensus 160 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~--~~~~~i~~~--------- 228 (305)
T 2wtk_C 160 HPFAADDTCRTSQGSPAFQPPEIANGLDTFSGFKVDIWSAGVTLYNITTGLYPFEGDNIY--KLFENIGKG--------- 228 (305)
T ss_dssp CTTCSSCEECCCCSCGGGCCHHHHTCCSCEESHHHHHHHHHHHHHHHHHSSCSCCCSSHH--HHHHHHHHC---------
T ss_pred CccccccccccCCCCCCCcChhhccCcccCCcchhhHHHHHHHHHHHHhCCCCCCCchHH--HHHHHHhcC---------
Confidence 5433333344567899999999987643 477999999999999999999998752111 111100000
Q ss_pred cccccCchhhhhHHHHHHHHHHHHHHHhccccCcCCCCCHHHHHHH
Q 002021 911 DANLLSQEDIHFVAKEQCVSFVFNLAMECTMEFPKQRINAKEIVTK 956 (979)
Q Consensus 911 ~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~eil~~ 956 (979)
. ...+..+++.+.+++.+||+.||++|||+.|+++|
T Consensus 229 ---~-------~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~ 264 (305)
T 2wtk_C 229 ---S-------YAIPGDCGPPLSDLLKGMLEYEPAKRFSIRQIRQH 264 (305)
T ss_dssp ---C-------CCCCSSSCHHHHHHHHHHTCSSTTTSCCHHHHHHS
T ss_pred ---C-------CCCCCccCHHHHHHHHHHccCChhhCCCHHHHhcC
Confidence 0 00112345678899999999999999999999987
No 247
>1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A*
Probab=100.00 E-value=3.2e-37 Score=337.69 Aligned_cols=253 Identities=23% Similarity=0.324 Sum_probs=203.5
Q ss_pred hhCCCCCCceeeeecceEEEEEEc-CCCcEEEEEEeccccc---------cchhcHHHHHHHHHhcC-CCCeeeEEEeec
Q 002021 680 ATDGFSENNLIGRGGFGSVYKASL-GDGMEVAVKVFTSQCG---------RAFKSFDVECEIMKSIR-HRNLIKVISSCS 748 (979)
Q Consensus 680 ~~~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vAvK~~~~~~~---------~~~~~~~~E~~~l~~l~-h~niv~l~~~~~ 748 (979)
..++|+..+.||+|+||.||+|.. .+|+.||||++..... ...+.+.+|++++++++ ||||+++++++.
T Consensus 15 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~ 94 (298)
T 1phk_A 15 FYENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKDTYE 94 (298)
T ss_dssp CTTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTCSTTCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEEE
T ss_pred hhhccceeeeecCCCceEEEEEEEcCcCceEEEEEEecccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeeeeeeec
Confidence 347889999999999999999954 5789999999865421 12356778999999996 999999999999
Q ss_pred cCCeeEEEEEecCCCccceeeccCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCEEeCCCCcEEEEeecc
Q 002021 749 NEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFSI 828 (979)
Q Consensus 749 ~~~~~~lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~i~H~Dik~~NIll~~~~~~kl~Dfg~ 828 (979)
+++..++||||+++++|.+++... ..+++.+++.++.|++.||+||| +++|+||||||+||+++.++.+||+|||.
T Consensus 95 ~~~~~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dl~p~Nil~~~~~~~kl~dfg~ 170 (298)
T 1phk_A 95 TNTFFFLVFDLMKKGELFDYLTEK-VTLSEKETRKIMRALLEVICALH---KLNIVHRDLKPENILLDDDMNIKLTDFGF 170 (298)
T ss_dssp CSSEEEEEEECCTTCBHHHHHHHH-SSCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECTTCCEEECCCTT
T ss_pred cCCeEEEEEeccCCCcHHHHHhcc-CCCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCCcceEEEcCCCcEEEecccc
Confidence 999999999999999999998764 36899999999999999999999 99999999999999999999999999999
Q ss_pred ccccCCCCCcceecccccCCCCCCccccC------CCCCCCchhHHHHHHHHHHHHcCCCCCcccccCcchHhHhhhhhc
Q 002021 829 AKMLTGEDQSMIQTQTLATIGYMAPEYGR------EGRVSANGDVYSFGIMLMETFTGKKPTDEIFNGEMTLKHWVNDWL 902 (979)
Q Consensus 829 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~------~~~~~~~~DvwslG~il~el~tg~~P~~~~~~~~~~~~~~~~~~~ 902 (979)
+........ .....+++.|+|||++. ...++.++||||+|+++|||++|+.||....... ..........
T Consensus 171 ~~~~~~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~-~~~~~~~~~~ 246 (298)
T 1phk_A 171 SCQLDPGEK---LREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQML-MLRMIMSGNY 246 (298)
T ss_dssp CEECCTTCC---BCCCCSCGGGCCHHHHHHHHCTTSCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHH-HHHHHHHTCC
T ss_pred hhhcCCCcc---cccccCCccccCHHHhccccccccccCCcccccHhHHHHHHHHHHCCCCCcCccHHH-HHHHHhcCCc
Confidence 987643221 23456899999999874 4568899999999999999999999986532111 0111000000
Q ss_pred CCccchhhcccccCchhhhhHHHHHHHHHHHHHHHhccccCcCCCCCHHHHHHH
Q 002021 903 PISTMEVVDANLLSQEDIHFVAKEQCVSFVFNLAMECTMEFPKQRINAKEIVTK 956 (979)
Q Consensus 903 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~eil~~ 956 (979)
. ...+....++..+.+++.+||+.||++|||+.|+++|
T Consensus 247 ~----------------~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~h 284 (298)
T 1phk_A 247 Q----------------FGSPEWDDYSDTVKDLVSRFLVVQPQKRYTAEEALAH 284 (298)
T ss_dssp C----------------CCTTTGGGSCHHHHHHHHHHCCSSGGGSCCHHHHTTS
T ss_pred c----------------cCcccccccCHHHHHHHHHHccCCcccCCCHHHHHhC
Confidence 0 0001123456679999999999999999999999874
No 248
>2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ...
Probab=100.00 E-value=1.9e-37 Score=348.49 Aligned_cols=263 Identities=23% Similarity=0.279 Sum_probs=185.3
Q ss_pred hCCCCCCceeeeecceEEEEEE-cCCCcEEEEEEecccc--ccchhcHHHHHHHHHhcCCCCeeeEEEeeccC------C
Q 002021 681 TDGFSENNLIGRGGFGSVYKAS-LGDGMEVAVKVFTSQC--GRAFKSFDVECEIMKSIRHRNLIKVISSCSNE------E 751 (979)
Q Consensus 681 ~~~~~~~~~lG~G~~g~Vy~~~-~~~~~~vAvK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~------~ 751 (979)
.++|+..+.||+|+||.||+|. ..+|+.||||++.... ....+.+.+|+++++.++||||+++++++... .
T Consensus 28 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~~ 107 (367)
T 2fst_X 28 PERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFN 107 (367)
T ss_dssp ETTEEEEEECC----CCEEEEEETTTTEEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSGGGCC
T ss_pred CCceEEeeEEeecCCeEEEEEEECCCCCEEEEEEeCccccCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEecCCccccCC
Confidence 4778999999999999999995 5679999999986532 22346778999999999999999999998654 5
Q ss_pred eeEEEEEecCCCccceeeccCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCEEeCCCCcEEEEeeccccc
Q 002021 752 FKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFSIAKM 831 (979)
Q Consensus 752 ~~~lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~i~H~Dik~~NIll~~~~~~kl~Dfg~~~~ 831 (979)
..++||||+ +++|.+++... .+++..+..++.||++||+||| +++|+||||||+||+++.++.+||+|||+++.
T Consensus 108 ~~~lv~e~~-~~~L~~~~~~~--~l~~~~~~~i~~qi~~aL~~LH---~~givH~Dlkp~NIll~~~~~~kL~DFG~a~~ 181 (367)
T 2fst_X 108 DVYLVTHLM-GADLNNIVKCQ--KLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARH 181 (367)
T ss_dssp CCEEEEECC-CEECC-----C--CCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEECTTCCEEECC------
T ss_pred eEEEEeccc-CCCHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHH---HCCeeeCCCCHhhEEECCCCCEEEeecccccc
Confidence 679999999 68999998763 6899999999999999999999 99999999999999999999999999999986
Q ss_pred cCCCCCcceecccccCCCCCCccccCC-CCCCCchhHHHHHHHHHHHHcCCCCCcccccCcchHhHhhhhhcCCccchhh
Q 002021 832 LTGEDQSMIQTQTLATIGYMAPEYGRE-GRVSANGDVYSFGIMLMETFTGKKPTDEIFNGEMTLKHWVNDWLPISTMEVV 910 (979)
Q Consensus 832 ~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwslG~il~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~ 910 (979)
.... .....||+.|+|||++.+ ..++.++||||+||++|||++|+.||...... ......... ......+..
T Consensus 182 ~~~~-----~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~-~~l~~i~~~-~g~p~~~~~ 254 (367)
T 2fst_X 182 TADE-----MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHI-DQLKLILRL-VGTPGAELL 254 (367)
T ss_dssp --------------CCCTTCCHHHHTTCCSCCTTHHHHHHHHHHHHHHHSSCSCCCSSHH-HHHHHHHHH-HCSCCHHHH
T ss_pred cccc-----CCCcCcCcCccChHHHcCCcCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH-HHHHHHHHH-hCCCCHHHH
Confidence 5322 234578999999999876 67899999999999999999999999753211 111111111 011000000
Q ss_pred c-----------ccccCchhhh-hHHHHHHHHHHHHHHHhccccCcCCCCCHHHHHHH
Q 002021 911 D-----------ANLLSQEDIH-FVAKEQCVSFVFNLAMECTMEFPKQRINAKEIVTK 956 (979)
Q Consensus 911 ~-----------~~~~~~~~~~-~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~eil~~ 956 (979)
. ..+....... ......+++.+.+++.+|++.||++|||+.|+++|
T Consensus 255 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dLl~~mL~~dP~~R~t~~e~L~h 312 (367)
T 2fst_X 255 KKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAH 312 (367)
T ss_dssp TTCCCHHHHHHHHTSCCCCCCCHHHHTTTCCHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred HHhhhHHHHHHHhccCCCCCCCHHHHCCCCCHHHHHHHHHhCCCCcccCcCHHHHhcC
Confidence 0 0000000000 01112345779999999999999999999999987
No 249
>1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A*
Probab=100.00 E-value=3.8e-37 Score=335.23 Aligned_cols=244 Identities=19% Similarity=0.265 Sum_probs=197.9
Q ss_pred hCCCCCCceeeeecceEEEEEEc-CCCcEEEEEEecccc--ccchhcHHHHHHHHHhc-CCCCeeeEEEeeccCCeeEEE
Q 002021 681 TDGFSENNLIGRGGFGSVYKASL-GDGMEVAVKVFTSQC--GRAFKSFDVECEIMKSI-RHRNLIKVISSCSNEEFKALV 756 (979)
Q Consensus 681 ~~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vAvK~~~~~~--~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lv 756 (979)
.++|+..+.||+|+||.||+|.. .+++.||||++.... ......+.+|+..+..+ +||||+++++++.+++..++|
T Consensus 10 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~~~~l~~h~~iv~~~~~~~~~~~~~lv 89 (289)
T 1x8b_A 10 TTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQHSHVVRYFSAWAEDDHMLIQ 89 (289)
T ss_dssp HHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCCTTSHHHHHHHHHHHHHHHSCSCTTBCCEEEEEEETTEEEEE
T ss_pred cchhhhhhhhcCCCceEEEEEEEcCCCceEEEEEecccccccHHHHHHHHHHHHHHHhCCCCCeeeeeeeeecCCeEEEE
Confidence 46788899999999999999955 479999999987542 23456678899999999 999999999999999999999
Q ss_pred EEecCCCccceeeccC---CCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCEEeCCC---------------
Q 002021 757 LEYMPHGSLEKYLYSS---NCILDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDN--------------- 818 (979)
Q Consensus 757 ~E~~~~g~L~~~l~~~---~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~i~H~Dik~~NIll~~~--------------- 818 (979)
|||+++++|.+++... ...+++.+++.++.|++.||+||| +++|+||||||+||+++.+
T Consensus 90 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~al~~lH---~~~ivH~Dikp~NIl~~~~~~~~~~~~~~~~~~~ 166 (289)
T 1x8b_A 90 NEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLRYIH---SMSLVHMDIKPSNIFISRTSIPNAASEEGDEDDW 166 (289)
T ss_dssp EECCTTCBHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEEC-----------------
T ss_pred EEecCCCcHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHH---hCCEeecCCCHHHEEEcCCCCCcccccccccccc
Confidence 9999999999999764 246899999999999999999999 9999999999999999844
Q ss_pred ----CcEEEEeeccccccCCCCCcceecccccCCCCCCccccCCC-CCCCchhHHHHHHHHHHHHcCCCCCcccccCcch
Q 002021 819 ----MVAHLSDFSIAKMLTGEDQSMIQTQTLATIGYMAPEYGREG-RVSANGDVYSFGIMLMETFTGKKPTDEIFNGEMT 893 (979)
Q Consensus 819 ----~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwslG~il~el~tg~~P~~~~~~~~~~ 893 (979)
..+||+|||.+....... ...||+.|+|||.+.+. .+++++||||+|+++|||++|..|+... ..
T Consensus 167 ~~~~~~~kl~Dfg~~~~~~~~~------~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~----~~ 236 (289)
T 1x8b_A 167 ASNKVMFKIGDLGHVTRISSPQ------VEEGDSRFLANEVLQENYTHLPKADIFALALTVVCAAGAEPLPRNG----DQ 236 (289)
T ss_dssp ---CCCEEECCCTTCEETTCSC------CCCCCGGGCCHHHHTTCCTTHHHHHHHHHHHHHHHHTTCCCCCSSS----HH
T ss_pred cCCceEEEEcccccccccCCcc------ccCCCccccChhHhcCCCCCCchhhHHHHHHHHHHHhcCCCCCcch----hH
Confidence 479999999998764322 23589999999998765 5668999999999999999998875431 11
Q ss_pred HhHhhhhhcCCccchhhcccccCchhhhhHHHHHHHHHHHHHHHhccccCcCCCCCHHHHHHH
Q 002021 894 LKHWVNDWLPISTMEVVDANLLSQEDIHFVAKEQCVSFVFNLAMECTMEFPKQRINAKEIVTK 956 (979)
Q Consensus 894 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~eil~~ 956 (979)
.........+ ..+..++..+.+++.+||+.||++|||+.|+++|
T Consensus 237 ~~~~~~~~~~-------------------~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~h 280 (289)
T 1x8b_A 237 WHEIRQGRLP-------------------RIPQVLSQEFTELLKVMIHPDPERRPSAMALVKH 280 (289)
T ss_dssp HHHHHTTCCC-------------------CCSSCCCHHHHHHHHHHTCSSGGGSCCHHHHHTC
T ss_pred HHHHHcCCCC-------------------CCCcccCHHHHHHHHHHhCCCcccCCCHHHHhhC
Confidence 1111110000 0112345678999999999999999999999876
No 250
>2r3i_A Cell division protein kinase 2; serine/threonine-protein kinase, cell cycle, inhibition, cyclin-dependent kinase, cancer, ATP-binding; HET: SCF; 1.28A {Homo sapiens} PDB: 2r3j_A* 2r3k_A* 2r3l_A* 2r3m_A* 2r3n_A* 2r3o_A* 2r3p_A* 2r3q_A* 1jvp_P* 1buh_A 1ckp_A* 1di8_A* 1dm2_A* 1f5q_A 1fin_A* 1fq1_B* 1fvt_A* 1fvv_A* 1g5s_A* 1gih_A* ...
Probab=100.00 E-value=5e-37 Score=336.28 Aligned_cols=268 Identities=22% Similarity=0.252 Sum_probs=202.2
Q ss_pred CCCCCCceeeeecceEEEEEEc-CCCcEEEEEEecccc--ccchhcHHHHHHHHHhcCCCCeeeEEEeeccCCeeEEEEE
Q 002021 682 DGFSENNLIGRGGFGSVYKASL-GDGMEVAVKVFTSQC--GRAFKSFDVECEIMKSIRHRNLIKVISSCSNEEFKALVLE 758 (979)
Q Consensus 682 ~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vAvK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~E 758 (979)
++|+..+.||+|+||.||+|.. .+|+.||||++.... ....+.+.+|++++++++||||+++++++.+++..++|||
T Consensus 3 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 82 (299)
T 2r3i_A 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFE 82 (299)
T ss_dssp TTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEC--------CCHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred chhhhhhhhccCCCeeEEEEEEcCCCceEEEEEeecCccchhhHHHHHHHHHHHHHcCCCCeeeEEEEEecCCceEEEEE
Confidence 5788899999999999999954 478999999986543 2234678899999999999999999999999999999999
Q ss_pred ecCCCccceeeccCC-CCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCEEeCCCCcEEEEeeccccccCCCCC
Q 002021 759 YMPHGSLEKYLYSSN-CILDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFSIAKMLTGEDQ 837 (979)
Q Consensus 759 ~~~~g~L~~~l~~~~-~~l~~~~~~~i~~~ia~~L~~LH~~~~~~i~H~Dik~~NIll~~~~~~kl~Dfg~~~~~~~~~~ 837 (979)
|++ ++|.+++.... ..+++..++.++.|++.||+||| +++|+||||||+||+++.++.+||+|||.+........
T Consensus 83 ~~~-~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dlkp~Nili~~~~~~kl~dfg~~~~~~~~~~ 158 (299)
T 2r3i_A 83 FLH-QDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCH---SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVR 158 (299)
T ss_dssp CCS-EEHHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEECTTSCEEECSTTHHHHHCCCSB
T ss_pred ccc-CCHHHHHHhhhccCCCHHHHHHHHHHHHHHHHHHH---HCCccCCCCCHHHeEEcCCCCEEECcchhhhhccCCcc
Confidence 997 59999887653 46899999999999999999999 89999999999999999999999999999987643221
Q ss_pred cceecccccCCCCCCccccCCCC-CCCchhHHHHHHHHHHHHcCCCCCcccccCcchHhHhhhhhcC-Cc--cchh----
Q 002021 838 SMIQTQTLATIGYMAPEYGREGR-VSANGDVYSFGIMLMETFTGKKPTDEIFNGEMTLKHWVNDWLP-IS--TMEV---- 909 (979)
Q Consensus 838 ~~~~~~~~gt~~y~aPE~~~~~~-~~~~~DvwslG~il~el~tg~~P~~~~~~~~~~~~~~~~~~~~-~~--~~~~---- 909 (979)
......+|+.|+|||.+.+.. ++.++||||+|+++|||++|+.||......+. .......... .. ....
T Consensus 159 --~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 235 (299)
T 2r3i_A 159 --TYTHEVVTLWYRAPEILLGAKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQ-LFRIFRTLGTPDEVVWPGVTSMP 235 (299)
T ss_dssp --CTTSCBCCCTTCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHH-HHHHHHHHCCCCTTTSTTGGGST
T ss_pred --ccCcccccccccCcHHhhccccCChHHHHHHHHHHHHHHHhCCCCCCCccHHHH-HHHHHHHhCCCchhhhhHhhcCc
Confidence 223456899999999987755 78999999999999999999999976332211 1111111000 00 0000
Q ss_pred -hcccccCchhh-hhHHHHHHHHHHHHHHHhccccCcCCCCCHHHHHHH
Q 002021 910 -VDANLLSQEDI-HFVAKEQCVSFVFNLAMECTMEFPKQRINAKEIVTK 956 (979)
Q Consensus 910 -~~~~~~~~~~~-~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~eil~~ 956 (979)
........... .......++.++.+++.+|++.||++|||+.|+++|
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~~~l~h 284 (299)
T 2r3i_A 236 DYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAH 284 (299)
T ss_dssp TCCTTSCCCCCCCHHHHSTTCCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred ccchhhhcccchhhHhhCCCCCHHHHHHHHHhcCcCcccCCCHHHHhcC
Confidence 00000000000 001112345678999999999999999999999875
No 251
>3o6n_A APL1; leucine-rich repeat, protein binding; HET: NAG; 1.85A {Anopheles gambiae}
Probab=100.00 E-value=4.8e-36 Score=341.47 Aligned_cols=348 Identities=18% Similarity=0.174 Sum_probs=197.6
Q ss_pred cccCCCCCCCc-cceeEeeCCCCcEEEEEecCCCccccCCCCCcCCCCCCeeeccCCcccccCCcc-ccccCcccEEecc
Q 002021 51 KNWNTSTPVCN-WTGVACEVHSQRVTVLNISSLNLTGTIPSQLGNLSSLQSLNLSFNRLFGSIPSA-IFTTYTLKYVCLR 128 (979)
Q Consensus 51 ~~w~~~~~~c~-w~gv~c~~~~~~v~~l~l~~~~l~g~~~~~l~~l~~L~~L~L~~n~~~~~~p~~-~~~l~~L~~L~L~ 128 (979)
++|..+.+||. |.+..|.....+ +............-..++++++|++++|.++. +|.. +..+++|++|+|+
T Consensus 4 ~~~~~~~~C~~~~~~~~c~~~~~~-----i~~~~~~~~~~~~~~~l~~l~~l~l~~~~l~~-l~~~~~~~l~~L~~L~L~ 77 (390)
T 3o6n_A 4 KPRQPEYKCIDSNLQYDCVFYDVH-----IDMQTQDVYFGFEDITLNNQKIVTFKNSTMRK-LPAALLDSFRQVELLNLN 77 (390)
T ss_dssp ---CCEECBCC------EEEESCE-----ECSSCCCCEESCSSGGGCCCSEEEEESCEESE-ECTHHHHHCCCCSEEECT
T ss_pred CCCCCccceehhhhhhccceeeee-----eecccccccccccccccCCceEEEecCCchhh-CChhHhcccccCcEEECC
Confidence 57888878875 555555422211 12111111112222356888899998888874 4544 5778888888888
Q ss_pred cccccccCCccccCCCCCcEEEccCCccCchhhhhhhccCCcccCCCCccceeecccccccccccccccCCCCCCceecC
Q 002021 129 GNQLSGTFPSFISNKSSLQHLDLSSNALSGEIRANICREIPREFGNLPELELMSLAANNLQGKIPLKIGNLRNLEKLDIG 208 (979)
Q Consensus 129 ~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~~ip~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls 208 (979)
+|++++..|..++.+++|++|+|++|.+++. .|..|+++++|++|+|++|+++...+..|+++++|++|+|+
T Consensus 78 ~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~--------~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~l~~L~~L~L~ 149 (390)
T 3o6n_A 78 DLQIEEIDTYAFAYAHTIQKLYMGFNAIRYL--------PPHVFQNVPLLTVLVLERNDLSSLPRGIFHNTPKLTTLSMS 149 (390)
T ss_dssp TSCCCEECTTTTTTCTTCCEEECCSSCCCCC--------CTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECC
T ss_pred CCcccccChhhccCCCCcCEEECCCCCCCcC--------CHHHhcCCCCCCEEECCCCccCcCCHHHhcCCCCCcEEECC
Confidence 8888877777888888888888888888753 45567788888888888888875555556778888888888
Q ss_pred CCeeeecCCccccccCccceeeccCCCCcCCCcccccCCCCCcCEEEccCCccccccCcccccCCCCcEEeccccccccc
Q 002021 209 DNKLVGIAPIAIFNVSTLKILGLQDNSLSGCLSSIGYARLPNLEILSLWGNNFSGTIPRFIFNASKLSILDLEGNSFSGF 288 (979)
Q Consensus 209 ~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~ 288 (979)
+|+++++.|..+.++++|+.|++++|++++.. +..+++ |++|++++|.+++.
T Consensus 150 ~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~----~~~l~~------------------------L~~L~l~~n~l~~~ 201 (390)
T 3o6n_A 150 NNNLERIEDDTFQATTSLQNLQLSSNRLTHVD----LSLIPS------------------------LFHANVSYNLLSTL 201 (390)
T ss_dssp SSCCCBCCTTTTSSCTTCCEEECCSSCCSBCC----GGGCTT------------------------CSEEECCSSCCSEE
T ss_pred CCccCccChhhccCCCCCCEEECCCCcCCccc----cccccc------------------------cceeeccccccccc
Confidence 88887777766666666666666666665431 223444 44444444444321
Q ss_pred cCccccccccccceeccccccccccchhhhhhcccCCCCccEEEccCCCCcccCCccccccccccccEEEccCccccCCC
Q 002021 289 IPNTFGNLRNLSWLVLSDNYLTSSTQELSFLSSLSNCKFLKYFDLSYNPLYRILPRTTVGNLSHSLEEFKMSNCNISGGI 368 (979)
Q Consensus 289 ~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~~L~~L~L~~n~i~~~~ 368 (979)
...++|+.|++++|.++..+.. .. ++|+.|++++|++++.
T Consensus 202 -----~~~~~L~~L~l~~n~l~~~~~~--------~~--------------------------~~L~~L~l~~n~l~~~- 241 (390)
T 3o6n_A 202 -----AIPIAVEELDASHNSINVVRGP--------VN--------------------------VELTILKLQHNNLTDT- 241 (390)
T ss_dssp -----ECCSSCSEEECCSSCCCEEECC--------CC--------------------------SSCCEEECCSSCCCCC-
T ss_pred -----CCCCcceEEECCCCeeeecccc--------cc--------------------------ccccEEECCCCCCccc-
Confidence 1112344444444444332210 01 1233333333333321
Q ss_pred CccccCCCcccEEEecCCCCCchhHHhhhcCCCCcEEEecCcccCCCccccccCCCCCceEecCCCcccccCCccccCCC
Q 002021 369 PEEISNLTNLRTIYLGGNKLNGSILITLSKLQKLQDLGLKDNKLEGSIPYDICNLAELYRLDLDGNKLSGSIPACFSNLT 448 (979)
Q Consensus 369 p~~l~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~ 448 (979)
..+..+++|++|+|++|.+++ ..|..+..+++|+.|+|++|++++ +|..+..++
T Consensus 242 -~~l~~l~~L~~L~Ls~n~l~~------------------------~~~~~~~~l~~L~~L~L~~n~l~~-~~~~~~~l~ 295 (390)
T 3o6n_A 242 -AWLLNYPGLVEVDLSYNELEK------------------------IMYHPFVKMQRLERLYISNNRLVA-LNLYGQPIP 295 (390)
T ss_dssp -GGGGGCTTCSEEECCSSCCCE------------------------EESGGGTTCSSCCEEECCSSCCCE-EECSSSCCT
T ss_pred -HHHcCCCCccEEECCCCcCCC------------------------cChhHccccccCCEEECCCCcCcc-cCcccCCCC
Confidence 233444444444444444443 344444444555555555555543 233444555
Q ss_pred cCceEecCCCccccccccccCcCCCcEEEeccccccCCCccccccccccceEeccCCccCc
Q 002021 449 SLRIVSLGSNELTSIPLTFWNLKDILNLNFSSNFLTGSLPLEIGSLKVLVGIDLSRNNFSG 509 (979)
Q Consensus 449 ~L~~L~L~~N~l~~lp~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~ 509 (979)
+|++|++++|+++.+|..+..+++|+.|++++|+++.. | +..+++|+.|++++|.++.
T Consensus 296 ~L~~L~L~~n~l~~~~~~~~~l~~L~~L~L~~N~i~~~-~--~~~~~~L~~L~l~~N~~~~ 353 (390)
T 3o6n_A 296 TLKVLDLSHNHLLHVERNQPQFDRLENLYLDHNSIVTL-K--LSTHHTLKNLTLSHNDWDC 353 (390)
T ss_dssp TCCEEECCSSCCCCCGGGHHHHTTCSEEECCSSCCCCC-C--CCTTCCCSEEECCSSCEEH
T ss_pred CCCEEECCCCcceecCccccccCcCCEEECCCCcccee-C--chhhccCCEEEcCCCCccc
Confidence 66666666666666666566666666666666666543 2 5556677777777777764
No 252
>2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens}
Probab=100.00 E-value=1.8e-37 Score=344.40 Aligned_cols=256 Identities=23% Similarity=0.311 Sum_probs=198.1
Q ss_pred HHHHhhCCCCCCceeeeecceEEEEEEc-CCCcEEEEEEeccccccchhcHHHHHHHHHhc-CCCCeeeEEEeecc----
Q 002021 676 ELCRATDGFSENNLIGRGGFGSVYKASL-GDGMEVAVKVFTSQCGRAFKSFDVECEIMKSI-RHRNLIKVISSCSN---- 749 (979)
Q Consensus 676 ~~~~~~~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~---- 749 (979)
++....+.|+..+.||+|+||.||+|.. .+|+.||||++.... ...+.+.+|+++++++ +||||+++++++..
T Consensus 18 ~l~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~-~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~ 96 (326)
T 2x7f_A 18 ALRDPAGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTG-DEEEEIKQEINMLKKYSHHRNIATYYGAFIKKNPP 96 (326)
T ss_dssp CCCCCTTTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCS-STTHHHHHHHHHHHHHCCSTTBCCEEEEEEECC--
T ss_pred hccCCCCcEEEEEEeccCCCEEEEEEEECCCCCeEEEEEEecCc-ccHHHHHHHHHHHHhccCCCCeeeeeeEEeeccCc
Confidence 3344567899999999999999999964 578999999986542 3456788999999999 79999999999865
Q ss_pred --CCeeEEEEEecCCCccceeeccC-CCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCEEeCCCCcEEEEee
Q 002021 750 --EEFKALVLEYMPHGSLEKYLYSS-NCILDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDF 826 (979)
Q Consensus 750 --~~~~~lv~E~~~~g~L~~~l~~~-~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~i~H~Dik~~NIll~~~~~~kl~Df 826 (979)
.+..++||||+++|+|.+++... ...+++..++.++.|++.||+||| +++|+||||||+||+++.++.+||+||
T Consensus 97 ~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH---~~~ivH~dlkp~NIl~~~~~~~kl~Df 173 (326)
T 2x7f_A 97 GMDDQLWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREILRGLSHLH---QHKVIHRDIKGQNVLLTENAEVKLVDF 173 (326)
T ss_dssp CCCCEEEEEEECCTTEEHHHHHHHSGGGCCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCSGGGEEECTTCCEEECCC
T ss_pred cccceEEEEEEcCCCCcHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHH---HCCccccCCcHHHEEEcCCCCEEEeeC
Confidence 56789999999999999998764 356899999999999999999999 899999999999999999999999999
Q ss_pred ccccccCCCCCcceecccccCCCCCCccccC-----CCCCCCchhHHHHHHHHHHHHcCCCCCcccccCcchHhHhhhhh
Q 002021 827 SIAKMLTGEDQSMIQTQTLATIGYMAPEYGR-----EGRVSANGDVYSFGIMLMETFTGKKPTDEIFNGEMTLKHWVNDW 901 (979)
Q Consensus 827 g~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~-----~~~~~~~~DvwslG~il~el~tg~~P~~~~~~~~~~~~~~~~~~ 901 (979)
|++....... .......||+.|+|||++. +..++.++||||+||++|||++|+.||........ ........
T Consensus 174 g~~~~~~~~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~-~~~~~~~~ 250 (326)
T 2x7f_A 174 GVSAQLDRTV--GRRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDMHPMRA-LFLIPRNP 250 (326)
T ss_dssp TTTC---------------CCGGGCCHHHHC--------CCTTHHHHHHHHHHHHHHHSSCTTTTSCHHHH-HHHHHHSC
T ss_pred cCceecCcCc--cccccccCCccccChhhhccccccCcCCCccchHHHHHHHHHHHHhCCCCCCCCcHHHH-HHHhhcCc
Confidence 9998654221 1223456899999999986 56788999999999999999999999865321111 00000000
Q ss_pred cCCccchhhcccccCchhhhhHHHHHHHHHHHHHHHhccccCcCCCCCHHHHHHH
Q 002021 902 LPISTMEVVDANLLSQEDIHFVAKEQCVSFVFNLAMECTMEFPKQRINAKEIVTK 956 (979)
Q Consensus 902 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~eil~~ 956 (979)
.+ .. ....++..+.+++.+||..||++||++.|+++|
T Consensus 251 ~~---------~~---------~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~h 287 (326)
T 2x7f_A 251 AP---------RL---------KSKKWSKKFQSFIESCLVKNHSQRPATEQLMKH 287 (326)
T ss_dssp CC---------CC---------SCSCSCHHHHHHHHHHCCSSGGGSCCHHHHHTS
T ss_pred cc---------cC---------CccccCHHHHHHHHHHhccChhhCCCHHHHhhC
Confidence 00 00 011234668999999999999999999999885
No 253
>3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2; KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase, structural genomics consortium; HET: SEP PTR IRB; 2.28A {Homo sapiens} PDB: 3k2l_A* 4azf_A*
Probab=100.00 E-value=5.5e-37 Score=352.40 Aligned_cols=197 Identities=23% Similarity=0.309 Sum_probs=171.2
Q ss_pred hCCCCCCceeeeecceEEEEE-EcCCCcEEEEEEeccccccchhcHHHHHHHHHhc------CCCCeeeEEEeeccCCee
Q 002021 681 TDGFSENNLIGRGGFGSVYKA-SLGDGMEVAVKVFTSQCGRAFKSFDVECEIMKSI------RHRNLIKVISSCSNEEFK 753 (979)
Q Consensus 681 ~~~~~~~~~lG~G~~g~Vy~~-~~~~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l------~h~niv~l~~~~~~~~~~ 753 (979)
..+|+..+.||+|+||.||+| ...+++.||||++... ....+.+.+|+++++.+ .|+||+++++++......
T Consensus 96 ~~ry~~~~~LG~G~fg~V~~a~~~~~~~~vAvK~~~~~-~~~~~~~~~E~~~l~~l~~~~~~~~~~iv~~~~~~~~~~~~ 174 (429)
T 3kvw_A 96 AYRYEVLKVIGKGSFGQVVKAYDHKVHQHVALKMVRNE-KRFHRQAAEEIRILEHLRKQDKDNTMNVIHMLENFTFRNHI 174 (429)
T ss_dssp TTTEEEEEEEEESSSEEEEEEEETTTTEEEEEEEECSC-HHHHHHHHHHHHHHHHHHTTCTTSCSCBCCEEEEEEETTEE
T ss_pred cCcEEEEEEcccCccEEEEEEEECCCCcEEEEEEECCc-cchHHHHHHHHHHHHHHhhccccCCcCEEEEEeecccCCeE
Confidence 356889999999999999999 4557899999998653 23345677899998887 577999999999999999
Q ss_pred EEEEEecCCCccceeeccCC-CCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCEEeCCCCc--EEEEeecccc
Q 002021 754 ALVLEYMPHGSLEKYLYSSN-CILDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMV--AHLSDFSIAK 830 (979)
Q Consensus 754 ~lv~E~~~~g~L~~~l~~~~-~~l~~~~~~~i~~~ia~~L~~LH~~~~~~i~H~Dik~~NIll~~~~~--~kl~Dfg~~~ 830 (979)
++||||++ ++|.+++.... ..+++..++.++.||+.||+||| +++|+||||||+||+++.++. +||+|||++.
T Consensus 175 ~lv~e~~~-~~L~~~l~~~~~~~~~~~~~~~i~~qi~~aL~~LH---~~~ivHrDlKp~NILl~~~~~~~vkL~DFG~a~ 250 (429)
T 3kvw_A 175 CMTFELLS-MNLYELIKKNKFQGFSLPLVRKFAHSILQCLDALH---KNRIIHCDLKPENILLKQQGRSGIKVIDFGSSC 250 (429)
T ss_dssp EEEECCCC-CBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHH---HHTEECSCCSGGGEEESSTTSCCEEECCCTTCE
T ss_pred EEEEeccC-CCHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCHHHeEEccCCCcceEEeecccce
Confidence 99999996 58998887653 45899999999999999999999 899999999999999999887 9999999997
Q ss_pred ccCCCCCcceecccccCCCCCCccccCCCCCCCchhHHHHHHHHHHHHcCCCCCccc
Q 002021 831 MLTGEDQSMIQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFTGKKPTDEI 887 (979)
Q Consensus 831 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~tg~~P~~~~ 887 (979)
..... .....||+.|+|||++.+..++.++|||||||++|||++|+.||...
T Consensus 251 ~~~~~-----~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltG~~pf~~~ 302 (429)
T 3kvw_A 251 YEHQR-----VYTYIQSRFYRAPEVILGARYGMPIDMWSLGCILAELLTGYPLLPGE 302 (429)
T ss_dssp ETTCC-----CCSSCSCGGGCCHHHHHTBCCCTHHHHHHHHHHHHHHHHSSCSSCCS
T ss_pred ecCCc-----ccccCCCCCccChHHHhCCCCCchHHHHhHHHHHHHHHhCCCCCCCC
Confidence 64322 23457899999999999999999999999999999999999999753
No 254
>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A
Probab=100.00 E-value=2e-37 Score=374.48 Aligned_cols=250 Identities=20% Similarity=0.256 Sum_probs=205.5
Q ss_pred hhCCCCCCceeeeecceEEEEEE-cCCCcEEEEEEecccc---ccchhcHHHHHHHHHhc-CCCCeeeEEEeeccCCeeE
Q 002021 680 ATDGFSENNLIGRGGFGSVYKAS-LGDGMEVAVKVFTSQC---GRAFKSFDVECEIMKSI-RHRNLIKVISSCSNEEFKA 754 (979)
Q Consensus 680 ~~~~~~~~~~lG~G~~g~Vy~~~-~~~~~~vAvK~~~~~~---~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~ 754 (979)
..++|+..+.||+|+||.||+|. ..+++.||||++.... ....+.+..|.+++..+ +||+|+++++++.+.+..|
T Consensus 339 ~~~~f~~~~~LG~G~fG~V~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~l~~~~~~~~~~~ 418 (674)
T 3pfq_A 339 KLTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLY 418 (674)
T ss_dssp -CTTEEEEEESSBTTTBCEEEEEESSSCCEEEEEEEEHHHHHHTTTTHHHHHHHHHHTCTTCCTTBCCEEEECBCSSEEE
T ss_pred cccceEEEEEEccCCCEEEEEEEECCCCcEEEEEEEeccccccHHHHHHHHHHHHHHHhccCCCeEEEEEEEEEeCCEEE
Confidence 34679999999999999999995 4578899999987542 33456678899999987 7999999999999999999
Q ss_pred EEEEecCCCccceeeccCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCEEeCCCCcEEEEeeccccccCC
Q 002021 755 LVLEYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFSIAKMLTG 834 (979)
Q Consensus 755 lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~i~H~Dik~~NIll~~~~~~kl~Dfg~~~~~~~ 834 (979)
+||||+++|+|.+++...+ .+++.+++.++.||+.||+||| +++|+||||||+|||++.++.+||+|||+++....
T Consensus 419 lV~E~~~gg~L~~~l~~~~-~~~~~~~~~~~~qi~~aL~~LH---~~gIiHrDLKp~NILl~~~g~ikL~DFGla~~~~~ 494 (674)
T 3pfq_A 419 FVMEYVNGGDLMYHIQQVG-RFKEPHAVFYAAEIAIGLFFLQ---SKGIIYRDLKLDNVMLDSEGHIKIADFGMCKENIW 494 (674)
T ss_dssp EEEECCCSCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHH---HTSEECCCCCSTTEEECSSSCEEECCCTTCEECCC
T ss_pred EEEeCcCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---hCCeEeccCChhhEEEcCCCcEEEeecceeecccc
Confidence 9999999999999997654 6999999999999999999999 99999999999999999999999999999986432
Q ss_pred CCCcceecccccCCCCCCccccCCCCCCCchhHHHHHHHHHHHHcCCCCCcccccCcchHhHhhhhhcCCccchhhcccc
Q 002021 835 EDQSMIQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFTGKKPTDEIFNGEMTLKHWVNDWLPISTMEVVDANL 914 (979)
Q Consensus 835 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 914 (979)
.. ......+||+.|+|||++.+..++.++|||||||++|||++|+.||...... ..+....... .
T Consensus 495 ~~--~~~~~~~GT~~Y~APE~l~~~~~~~~~DvwSlGvilyelltG~~Pf~~~~~~-~~~~~i~~~~------------~ 559 (674)
T 3pfq_A 495 DG--VTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDED-ELFQSIMEHN------------V 559 (674)
T ss_dssp TT--CCBCCCCSCSSSCCHHHHTCCCBSTHHHHHHHHHHHHHHHHSSCSSCCSSHH-HHHHHHHSSC------------C
T ss_pred CC--cccccccCCCcccCHhhhcCCCCCccceEechHHHHHHHHcCCCCCCCCCHH-HHHHHHHhCC------------C
Confidence 22 2234567999999999999999999999999999999999999999753211 1111111100 0
Q ss_pred cCchhhhhHHHHHHHHHHHHHHHhccccCcCCCCCH-----HHHHHH
Q 002021 915 LSQEDIHFVAKEQCVSFVFNLAMECTMEFPKQRINA-----KEIVTK 956 (979)
Q Consensus 915 ~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~-----~eil~~ 956 (979)
..+...+.++.+++.+|++.||++||++ +||++|
T Consensus 560 --------~~p~~~s~~~~~li~~lL~~dP~~R~~~~~~~~~ei~~h 598 (674)
T 3pfq_A 560 --------AYPKSMSKEAVAICKGLMTKHPGKRLGCGPEGERDIKEH 598 (674)
T ss_dssp --------CCCTTSCHHHHHHHHHHSCSSSTTCTTCSTTHHHHHHSS
T ss_pred --------CCCccCCHHHHHHHHHHccCCHHHCCCCCCCcHHHHhcC
Confidence 0112345679999999999999999997 777764
No 255
>1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase, alternative splicing, ATP-binding, chromosome partition, differentiation, mRNA processing; 1.73A {Homo sapiens} PDB: 1wbp_A* 3beg_A* 2x7g_A*
Probab=100.00 E-value=4e-37 Score=351.57 Aligned_cols=265 Identities=20% Similarity=0.237 Sum_probs=200.6
Q ss_pred hCCCCCCceeeeecceEEEEEE-cCCCcEEEEEEeccccccchhcHHHHHHHHHhcC--------CCCeeeEEEeec---
Q 002021 681 TDGFSENNLIGRGGFGSVYKAS-LGDGMEVAVKVFTSQCGRAFKSFDVECEIMKSIR--------HRNLIKVISSCS--- 748 (979)
Q Consensus 681 ~~~~~~~~~lG~G~~g~Vy~~~-~~~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~--------h~niv~l~~~~~--- 748 (979)
.++|+..+.||+|+||.||+|. ..+++.||||++... ....+.+.+|+++++.++ ||||+++++++.
T Consensus 36 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~-~~~~~~~~~E~~~l~~l~~~~~~~~~~~~iv~~~~~~~~~~ 114 (397)
T 1wak_A 36 NGRYHVIRKLGWGHFSTVWLSWDIQGKKFVAMKVVKSA-EHYTETALDEIRLLKSVRNSDPNDPNREMVVQLLDDFKISG 114 (397)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSC-HHHHHHHHHHHHHHHHHHHSCTTCGGGGGBCCEEEEEEEEE
T ss_pred CCeEEEEEEeeecCCeeEEEEEecCCCeEEEEEEEecC-CcchHHHHHHHHHHHHHhhcCCCCCCcceeeeeecceeecC
Confidence 3678999999999999999995 567899999998643 234567889999999986 788999999987
Q ss_pred -cCCeeEEEEEecCCCccceeeccC-CCCCCHHHHHHHHHHHHHHHHHHhcCCCC-CeEecCCCCCCEEeCCCC------
Q 002021 749 -NEEFKALVLEYMPHGSLEKYLYSS-NCILDIFQRLNIMIDVASALEYLHFGYSA-PVIHCDLKPSNVLLDDNM------ 819 (979)
Q Consensus 749 -~~~~~~lv~E~~~~g~L~~~l~~~-~~~l~~~~~~~i~~~ia~~L~~LH~~~~~-~i~H~Dik~~NIll~~~~------ 819 (979)
+....++||||+ ++++.+++... ...+++..++.++.||+.||+||| ++ +|+||||||+||+++.++
T Consensus 115 ~~~~~~~lv~e~~-~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~lH---~~~givHrDikp~NIll~~~~~~~~~~ 190 (397)
T 1wak_A 115 VNGTHICMVFEVL-GHHLLKWIIKSNYQGLPLPCVKKIIQQVLQGLDYLH---TKCRIIHTDIKPENILLSVNEQYIRRL 190 (397)
T ss_dssp TTEEEEEEEECCC-CCBHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHH---HTTCEECCCCSGGGEEECCCHHHHHHH
T ss_pred CCCceEEEEEecc-CccHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHH---HhCCEecCCCCHHHeeEeccchhhhhh
Confidence 567899999999 45666655443 356999999999999999999999 87 999999999999999775
Q ss_pred -------------------------------------------cEEEEeeccccccCCCCCcceecccccCCCCCCcccc
Q 002021 820 -------------------------------------------VAHLSDFSIAKMLTGEDQSMIQTQTLATIGYMAPEYG 856 (979)
Q Consensus 820 -------------------------------------------~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~ 856 (979)
.+||+|||.+...... .....||+.|+|||++
T Consensus 191 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DfG~a~~~~~~-----~~~~~gt~~y~aPE~~ 265 (397)
T 1wak_A 191 AAEATEWQRSGAPPPSGSAVSTAPATAGNFLVNPLEPKNAEKLKVKIADLGNACWVHKH-----FTEDIQTRQYRSLEVL 265 (397)
T ss_dssp HHHHC---------------------CCTTSCCTTSGGGGGGCCEEECCGGGCEETTBC-----SCSCCSCGGGCCHHHH
T ss_pred hhhhHHHhhcCCCCCCCCccccCCcccccccccccccccccccceEecccccccccccc-----CccCCCCCcccCChhh
Confidence 7999999999876422 2345789999999999
Q ss_pred CCCCCCCchhHHHHHHHHHHHHcCCCCCcccccCcch-----HhHhhhhhcCCccchh----------hcc----ccc--
Q 002021 857 REGRVSANGDVYSFGIMLMETFTGKKPTDEIFNGEMT-----LKHWVNDWLPISTMEV----------VDA----NLL-- 915 (979)
Q Consensus 857 ~~~~~~~~~DvwslG~il~el~tg~~P~~~~~~~~~~-----~~~~~~~~~~~~~~~~----------~~~----~~~-- 915 (979)
.+..++.++|||||||++|||++|+.||......+.. ...... ......... +.. ...
T Consensus 266 ~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~~~~~~~~~~-~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 344 (397)
T 1wak_A 266 IGSGYNTPADIWSTACMAFELATGDYLFEPHSGEEYTRDEDHIALIIE-LLGKVPRKLIVAGKYSKEFFTKKGDLKHITK 344 (397)
T ss_dssp HTSCCCTHHHHHHHHHHHHHHHHSSCSCCCCCCSSSCHHHHHHHHHHH-HHCSCCHHHHHHCTTGGGTBCTTSSBSSCCC
T ss_pred cCCCCCcHHHHHHHHHHHHHHhhCCCCCCCCcccccCchHHHHHHHHH-hcCCCChHHhhcccccccccCCccccccccc
Confidence 9889999999999999999999999999754332211 011000 000000000 000 000
Q ss_pred -------CchhhhhHHHHHHHHHHHHHHHhccccCcCCCCCHHHHHHH
Q 002021 916 -------SQEDIHFVAKEQCVSFVFNLAMECTMEFPKQRINAKEIVTK 956 (979)
Q Consensus 916 -------~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~eil~~ 956 (979)
.............+..+.+++.+||+.||++|||+.|+++|
T Consensus 345 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~h 392 (397)
T 1wak_A 345 LKPWGLFEVLVEKYEWSQEEAAGFTDFLLPMLELIPEKRATAAECLRH 392 (397)
T ss_dssp CCCCCHHHHHHHTSCCCHHHHHHHHHHHGGGGCSSGGGSCCHHHHHTS
T ss_pred cCCcchhHhhhhhcccchhhHHHHHHHHHHHhccChhhcCCHHHHhhC
Confidence 00000011124556789999999999999999999999875
No 256
>3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 4gsb_A* 4gt3_A* 4gva_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3zu7_A 3zuv_A* 3o71_A 3r63_A 3c9w_A* 2y9q_A* 4fmq_A* ...
Probab=100.00 E-value=7e-37 Score=344.73 Aligned_cols=268 Identities=22% Similarity=0.251 Sum_probs=202.3
Q ss_pred hCCCCCCceeeeecceEEEEEE-cCCCcEEEEEEeccccc-cchhcHHHHHHHHHhcCCCCeeeEEEeeccC-----Cee
Q 002021 681 TDGFSENNLIGRGGFGSVYKAS-LGDGMEVAVKVFTSQCG-RAFKSFDVECEIMKSIRHRNLIKVISSCSNE-----EFK 753 (979)
Q Consensus 681 ~~~~~~~~~lG~G~~g~Vy~~~-~~~~~~vAvK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~-----~~~ 753 (979)
.++|+..+.||+|+||.||+|. ..+++.||||++..... ...+.+.+|++++++++||||+++++++... ...
T Consensus 26 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 105 (364)
T 3qyz_A 26 GPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDV 105 (364)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCTTCHHHHHHHHHHHHHHHHCCCTTBCCCCEEECCSSTTTCCCE
T ss_pred cccEEEEEEeecCCCeEEEEEEECCCCeEEEEEEeccccCcHHHHHHHHHHHHHHhcCCCCCccceeEEecCCccccceE
Confidence 4678999999999999999995 45789999999875432 2346788999999999999999999998654 468
Q ss_pred EEEEEecCCCccceeeccCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCEEeCCCCcEEEEeeccccccC
Q 002021 754 ALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFSIAKMLT 833 (979)
Q Consensus 754 ~lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~i~H~Dik~~NIll~~~~~~kl~Dfg~~~~~~ 833 (979)
++||||++ |+|.+++... .+++.++..++.|++.||+||| +++|+||||||+||+++.++.+||+|||++....
T Consensus 106 ~iv~e~~~-~~L~~~l~~~--~~~~~~~~~i~~qi~~aL~~LH---~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~ 179 (364)
T 3qyz_A 106 YIVQDLME-TDLYKLLKTQ--HLSNDHICYFLYQILRGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVAD 179 (364)
T ss_dssp EEEEECCS-EEHHHHHHHC--CCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEECTTCCEEECCCTTCEECC
T ss_pred EEEEcccC-cCHHHHHHhC--CCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCChHhEEECCCCCEEEEeCcceEecC
Confidence 99999997 5999888764 5899999999999999999999 9999999999999999999999999999998764
Q ss_pred CCCCc-ceecccccCCCCCCccccCC-CCCCCchhHHHHHHHHHHHHcCCCCCcccccCcchHhHhhhhhcCCccchhhc
Q 002021 834 GEDQS-MIQTQTLATIGYMAPEYGRE-GRVSANGDVYSFGIMLMETFTGKKPTDEIFNGEMTLKHWVNDWLPISTMEVVD 911 (979)
Q Consensus 834 ~~~~~-~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwslG~il~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 911 (979)
..... .......||+.|+|||++.+ ..++.++||||+||++|||++|+.||......+ ........... ...+...
T Consensus 180 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~-~~~~i~~~~~~-~~~~~~~ 257 (364)
T 3qyz_A 180 PDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLD-QLNHILGILGS-PSQEDLN 257 (364)
T ss_dssp GGGCBCCTTCCCCSCGGGCCHHHHHTBCSCSTHHHHHHHHHHHHHHHHSSCSSCCSSGGG-HHHHHHHHHCS-CCHHHHH
T ss_pred CCCCccccccccccccCCCCCHHhcCCCCCCcchhHHHHHHHHHHHHHCCCCCCCCChHH-HHHHHHHHhCC-CCHHHHH
Confidence 33221 11234578999999998654 458999999999999999999999997532221 11111111110 0000000
Q ss_pred c-----------cccCc-hhhhhHHHHHHHHHHHHHHHhccccCcCCCCCHHHHHHH
Q 002021 912 A-----------NLLSQ-EDIHFVAKEQCVSFVFNLAMECTMEFPKQRINAKEIVTK 956 (979)
Q Consensus 912 ~-----------~~~~~-~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~eil~~ 956 (979)
. ..... ..........++.++.+++.+|++.||++|||+.|+++|
T Consensus 258 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h 314 (364)
T 3qyz_A 258 CIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAH 314 (364)
T ss_dssp TCCCHHHHHHHHTSCCCCCCCHHHHCTTSCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred HhhhhhHHHHHHhcCCccCCCHHHhCCCCCHHHHHHHHHHcCCChhhCCCHHHHhcC
Confidence 0 00000 000011112345779999999999999999999999986
No 257
>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A*
Probab=100.00 E-value=1.3e-37 Score=343.21 Aligned_cols=256 Identities=22% Similarity=0.349 Sum_probs=197.5
Q ss_pred HHhhCCCCCCceeeeecceEEEEEEcCCCcEEEEEEecccc--ccchhcHHHHHHHHHhcC--CCCeeeEEEeeccCCee
Q 002021 678 CRATDGFSENNLIGRGGFGSVYKASLGDGMEVAVKVFTSQC--GRAFKSFDVECEIMKSIR--HRNLIKVISSCSNEEFK 753 (979)
Q Consensus 678 ~~~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~vAvK~~~~~~--~~~~~~~~~E~~~l~~l~--h~niv~l~~~~~~~~~~ 753 (979)
....+.|+..+.||+|+||.||+|...+++.||||++.... ....+.+.+|++++++++ ||||+++++++.+++..
T Consensus 24 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~~~~~~~ 103 (313)
T 3cek_A 24 SVKGRIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYI 103 (313)
T ss_dssp EETTEEEEEEEEEECCSSEEEEEEECTTCCEEEEEEEECSSCCHHHHHHHHHHHHHHHHHGGGCTTBCCEEEEEECSSEE
T ss_pred eeccceEEEEEEecCCCCEEEEEEEcCCCcEEEEEEeccccccccchHHHHHHHHHHHhccccCCceEEEEEEeecCCEE
Confidence 34456789999999999999999988889999999986442 234567889999999997 59999999999999999
Q ss_pred EEEEEecCCCccceeeccCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCEEeCCCCcEEEEeeccccccC
Q 002021 754 ALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFSIAKMLT 833 (979)
Q Consensus 754 ~lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~i~H~Dik~~NIll~~~~~~kl~Dfg~~~~~~ 833 (979)
++||| +.+++|.+++.... .+++.+++.++.|+++||+||| +++|+||||||+||++++ +.+||+|||++....
T Consensus 104 ~lv~e-~~~~~L~~~l~~~~-~~~~~~~~~i~~qi~~aL~~LH---~~~ivH~dlkp~NIl~~~-~~~kL~Dfg~~~~~~ 177 (313)
T 3cek_A 104 YMVME-CGNIDLNSWLKKKK-SIDPWERKSYWKNMLEAVHTIH---QHGIVHSDLKPANFLIVD-GMLKLIDFGIANQMQ 177 (313)
T ss_dssp EEEEC-CCSEEHHHHHHHCS-SCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEEET-TEEEECCCSSSCC--
T ss_pred EEEEe-cCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---HCCceecCCCcccEEEEC-CeEEEeecccccccc
Confidence 99999 55789999987654 6899999999999999999999 899999999999999965 899999999998765
Q ss_pred CCCCcceecccccCCCCCCccccCC-----------CCCCCchhHHHHHHHHHHHHcCCCCCcccccCcchHhHhhhhhc
Q 002021 834 GEDQSMIQTQTLATIGYMAPEYGRE-----------GRVSANGDVYSFGIMLMETFTGKKPTDEIFNGEMTLKHWVNDWL 902 (979)
Q Consensus 834 ~~~~~~~~~~~~gt~~y~aPE~~~~-----------~~~~~~~DvwslG~il~el~tg~~P~~~~~~~~~~~~~~~~~~~ 902 (979)
............||+.|+|||.+.+ ..++.++||||+|+++|||++|+.||..................
T Consensus 178 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~ 257 (313)
T 3cek_A 178 PDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAIIDPNH 257 (313)
T ss_dssp ------------CCGGGCCHHHHTTCC----------CCCHHHHHHHHHHHHHHHHHSSCTTTTCCSHHHHHHHHHCTTS
T ss_pred CccccccccCCCCCCCcCCHHHHhhcccccccccccccCCchHHHHHHHHHHHHHHhCCCchhhHHHHHHHHHHHHhccc
Confidence 4333333345578999999998865 46888999999999999999999999753322111111111000
Q ss_pred CCccchhhcccccCchhhhhHHHHHHHHHHHHHHHhccccCcCCCCCHHHHHHHH
Q 002021 903 PISTMEVVDANLLSQEDIHFVAKEQCVSFVFNLAMECTMEFPKQRINAKEIVTKL 957 (979)
Q Consensus 903 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~eil~~L 957 (979)
. . ..+..++.++.+++.+||+.||++||++.|++++-
T Consensus 258 ~---~---------------~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~h~ 294 (313)
T 3cek_A 258 E---I---------------EFPDIPEKDLQDVLKCCLKRDPKQRISIPELLAHP 294 (313)
T ss_dssp C---C---------------CCCCCSCHHHHHHHHHHTCSSTTTSCCHHHHHTSH
T ss_pred c---c---------------CCcccchHHHHHHHHHHccCCcccCcCHHHHhcCc
Confidence 0 0 00112245688999999999999999999999863
No 258
>2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A*
Probab=100.00 E-value=3e-37 Score=371.84 Aligned_cols=259 Identities=23% Similarity=0.359 Sum_probs=207.3
Q ss_pred hCCCCCCceeeeecceEEEEEEcC----CCcEEEEEEecccc-ccchhcHHHHHHHHHhcCCCCeeeEEEeeccCCeeEE
Q 002021 681 TDGFSENNLIGRGGFGSVYKASLG----DGMEVAVKVFTSQC-GRAFKSFDVECEIMKSIRHRNLIKVISSCSNEEFKAL 755 (979)
Q Consensus 681 ~~~~~~~~~lG~G~~g~Vy~~~~~----~~~~vAvK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 755 (979)
.++|+..+.||+|+||.||+|... .+..||||++.... ....+.+.+|+.++++++||||+++++++.+ +..++
T Consensus 389 ~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~-~~~~l 467 (656)
T 2j0j_A 389 RERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVITE-NPVWI 467 (656)
T ss_dssp GGGEEEEEEEECCSSCCEEEEEECCSSSCCEEEEEEECSSTTCHHHHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCEE
T ss_pred cccEEEeeEEeeCCCEEEEEEEEecCCCccEEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEec-CceEE
Confidence 356888899999999999999653 35679999986543 2334678899999999999999999999854 56899
Q ss_pred EEEecCCCccceeeccCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCEEeCCCCcEEEEeeccccccCCC
Q 002021 756 VLEYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFSIAKMLTGE 835 (979)
Q Consensus 756 v~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~i~H~Dik~~NIll~~~~~~kl~Dfg~~~~~~~~ 835 (979)
||||+++|+|.+++...+..+++..++.++.|++.||+||| +++|+||||||+||+++.++.+||+|||+++.....
T Consensus 468 v~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LH---~~givHrDikp~NILl~~~~~vkL~DFG~a~~~~~~ 544 (656)
T 2j0j_A 468 IMELCTLGELRSFLQVRKFSLDLASLILYAYQLSTALAYLE---SKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDS 544 (656)
T ss_dssp EEECCTTCBHHHHHHHTTTTCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEEEETTEEEECCCCCCCSCCC-
T ss_pred EEEcCCCCcHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHH---hCCccccccchHhEEEeCCCCEEEEecCCCeecCCC
Confidence 99999999999999877667999999999999999999999 899999999999999999999999999999876433
Q ss_pred CCcceecccccCCCCCCccccCCCCCCCchhHHHHHHHHHHHHc-CCCCCcccccCcchHhHhhhhhcCCccchhhcccc
Q 002021 836 DQSMIQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFT-GKKPTDEIFNGEMTLKHWVNDWLPISTMEVVDANL 914 (979)
Q Consensus 836 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~t-g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 914 (979)
. ........+|+.|+|||.+.+..++.++|||||||++|||++ |..||......+ ....+....
T Consensus 545 ~-~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt~g~~Pf~~~~~~~--~~~~i~~~~------------ 609 (656)
T 2j0j_A 545 T-YYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNND--VIGRIENGE------------ 609 (656)
T ss_dssp ----------CCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHH--HHHHHHHTC------------
T ss_pred c-ceeccCCCCCcceeCHHHhcCCCCCchhhHHHHHHHHHHHHHcCCCCCCCCCHHH--HHHHHHcCC------------
Confidence 2 222234457789999999988899999999999999999997 999987532211 111111000
Q ss_pred cCchhhhhHHHHHHHHHHHHHHHhccccCcCCCCCHHHHHHHHHHhHHhh
Q 002021 915 LSQEDIHFVAKEQCVSFVFNLAMECTMEFPKQRINAKEIVTKLLKIRDSL 964 (979)
Q Consensus 915 ~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~eil~~L~~~~~~~ 964 (979)
....+..+++.+.+++.+||..||++|||+.|+++.|+++.+..
T Consensus 610 ------~~~~~~~~~~~l~~li~~~l~~dP~~RPs~~el~~~L~~il~~~ 653 (656)
T 2j0j_A 610 ------RLPMPPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQLSTILEEE 653 (656)
T ss_dssp ------CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHH
T ss_pred ------CCCCCccccHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHHHh
Confidence 00112345677999999999999999999999999999998754
No 259
>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A
Probab=100.00 E-value=5.8e-37 Score=336.34 Aligned_cols=253 Identities=22% Similarity=0.289 Sum_probs=193.4
Q ss_pred hCCCCCCceeeeecceEEEEEEc-CCCcEEEEEEeccccccchhcHHHHHHHHHhcCCCCeeeEEEeecc----------
Q 002021 681 TDGFSENNLIGRGGFGSVYKASL-GDGMEVAVKVFTSQCGRAFKSFDVECEIMKSIRHRNLIKVISSCSN---------- 749 (979)
Q Consensus 681 ~~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~---------- 749 (979)
.++|+..+.||+|+||.||+|.. .+++.||||++... ....+.+.+|+++++.++||||+++++++.+
T Consensus 5 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~-~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~ 83 (303)
T 1zy4_A 5 ASDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHT-EEKLSTILSEVMLLASLNHQYVVRYYAAWLERRNFVKPMTA 83 (303)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEEE-HHHHHHHHHHHHHHTTCCCTTBCCEEEEEEECCCCCC----
T ss_pred cccchhhheeccCCcEEEEEEEEcCCCeEEEEEEEecc-HHHHHHHHHHHHHHHhcCchHHHHHHHHHHhhcchhhhhcc
Confidence 45688899999999999999964 57999999998643 2345678899999999999999999998754
Q ss_pred ---CCeeEEEEEecCCCccceeeccCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCEEeCCCCcEEEEee
Q 002021 750 ---EEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDF 826 (979)
Q Consensus 750 ---~~~~~lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~i~H~Dik~~NIll~~~~~~kl~Df 826 (979)
.+..++||||+++|+|.+++......+++.+++.++.|+++|++||| +++|+||||||+||+++.++.+||+||
T Consensus 84 ~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~LH---~~~i~H~dlkp~Nil~~~~~~~kl~df 160 (303)
T 1zy4_A 84 VKKKSTLFIQMEYCENGTLYDLIHSENLNQQRDEYWRLFRQILEALSYIH---SQGIIHRDLKPMNIFIDESRNVKIGDF 160 (303)
T ss_dssp --CEEEEEEEEECCCSCBHHHHHHHSCGGGCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEECTTSCEEECCC
T ss_pred cccCCceEEEEecCCCCCHHHhhhccccccchHHHHHHHHHHHHHHHHHH---hCCeecccCCHHhEEEcCCCCEEEeeC
Confidence 45789999999999999999877667889999999999999999999 899999999999999999999999999
Q ss_pred ccccccCCCCC------------cceecccccCCCCCCccccCCC-CCCCchhHHHHHHHHHHHHcCCCCCcccccCcch
Q 002021 827 SIAKMLTGEDQ------------SMIQTQTLATIGYMAPEYGREG-RVSANGDVYSFGIMLMETFTGKKPTDEIFNGEMT 893 (979)
Q Consensus 827 g~~~~~~~~~~------------~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwslG~il~el~tg~~P~~~~~~~~~~ 893 (979)
|.+........ ........||+.|+|||.+.+. .++.++||||+||++|||++ ||.........
T Consensus 161 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~---p~~~~~~~~~~ 237 (303)
T 1zy4_A 161 GLAKNVHRSLDILKLDSQNLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMIY---PFSTGMERVNI 237 (303)
T ss_dssp CCCSCTTC-------------------------CTTSCHHHHTSCSCCCTHHHHHHHHHHHHHHHS---CCSSHHHHHHH
T ss_pred cchhhcccccchhccccccccccccccccCCCcccccCcccccCCCCCcchhhHHHHHHHHHHHHh---ccCCchhHHHH
Confidence 99986542210 1122345689999999998754 68999999999999999998 55432111111
Q ss_pred HhHhhhhhcCCccchhhcccccCchhhhhHHHHHHHHHHHHHHHhccccCcCCCCCHHHHHHH
Q 002021 894 LKHWVNDWLPISTMEVVDANLLSQEDIHFVAKEQCVSFVFNLAMECTMEFPKQRINAKEIVTK 956 (979)
Q Consensus 894 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~eil~~ 956 (979)
.... ..... .. .......++..+.+++.+||+.||.+|||+.|+++|
T Consensus 238 ~~~~-~~~~~-~~--------------~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~h 284 (303)
T 1zy4_A 238 LKKL-RSVSI-EF--------------PPDFDDNKMKVEKKIIRLLIDHDPNKRPGARTLLNS 284 (303)
T ss_dssp HHHH-HSTTC-CC--------------CTTCCTTTSHHHHHHHHHHTCSSGGGSCCHHHHHHS
T ss_pred HHhc-ccccc-cc--------------CccccccchHHHHHHHHHHHhcCcccCcCHHHHhCC
Confidence 1111 00000 00 000112344568899999999999999999999975
No 260
>1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ...
Probab=100.00 E-value=9.2e-37 Score=349.78 Aligned_cols=263 Identities=24% Similarity=0.322 Sum_probs=193.7
Q ss_pred CCCCCCceeeeecceEEEEEEc-CCCcEEEEEEeccccccchhcHHHHHHHHHhcCCCCeeeEEEeecc------CCeeE
Q 002021 682 DGFSENNLIGRGGFGSVYKASL-GDGMEVAVKVFTSQCGRAFKSFDVECEIMKSIRHRNLIKVISSCSN------EEFKA 754 (979)
Q Consensus 682 ~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~------~~~~~ 754 (979)
..|+..+.||+|+||.||+|.. .+|+.||||++.... +...+|+++++.++||||++++++|.. ....+
T Consensus 54 ~~y~~~~~lG~G~fg~Vy~~~~~~~~~~vaiK~~~~~~----~~~~~E~~il~~l~hpniv~l~~~~~~~~~~~~~~~~~ 129 (420)
T 1j1b_A 54 VSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDK----RFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLN 129 (420)
T ss_dssp EEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEECCT----TSCCHHHHHHHTCCCTTBCCEEEEEEEEETTTTEEEEE
T ss_pred ceEEeeeEEeeCCCEEEEEEEECCCCcEEEEEEecccc----hhHHHHHHHHHHcCCCCccceeeEEeccCCCCcceeEE
Confidence 3578889999999999999965 569999999986432 234479999999999999999998743 22467
Q ss_pred EEEEecCCCccceeec---cCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCEEeCCC-CcEEEEeecccc
Q 002021 755 LVLEYMPHGSLEKYLY---SSNCILDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDN-MVAHLSDFSIAK 830 (979)
Q Consensus 755 lv~E~~~~g~L~~~l~---~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~i~H~Dik~~NIll~~~-~~~kl~Dfg~~~ 830 (979)
+||||+++ ++.+.+. .....+++..++.++.||++||+||| +++|+||||||+|||++.+ +.+||+|||+++
T Consensus 130 lv~e~~~~-~l~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH---~~~ivHrDlkp~NILl~~~~~~~kl~DFG~a~ 205 (420)
T 1j1b_A 130 LVLDYVPE-TVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIH---SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAK 205 (420)
T ss_dssp EEEECCCE-EHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHH---TTTEECSCCSGGGEEEETTTTEEEECCCTTCE
T ss_pred eehhcccc-cHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHH---HCCccccCCChhhEEEeCCCCeEEeccchhhh
Confidence 99999976 6665553 23457999999999999999999999 9999999999999999955 678999999998
Q ss_pred ccCCCCCcceecccccCCCCCCccccCCC-CCCCchhHHHHHHHHHHHHcCCCCCcccccCcchHhHhhhhhcCCccchh
Q 002021 831 MLTGEDQSMIQTQTLATIGYMAPEYGREG-RVSANGDVYSFGIMLMETFTGKKPTDEIFNGEMTLKHWVNDWLPISTMEV 909 (979)
Q Consensus 831 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwslG~il~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~ 909 (979)
....... .....+|+.|+|||++.+. .++.++||||+||++|||++|+.||...... ..+...+..........+
T Consensus 206 ~~~~~~~---~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~G~~pf~~~~~~-~~l~~i~~~lg~p~~~~~ 281 (420)
T 1j1b_A 206 QLVRGEP---NVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGV-DQLVEIIKVLGTPTREQI 281 (420)
T ss_dssp ECCTTCC---CCSCCSCTTSCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHH-HHHHHHHHHHCSCCHHHH
T ss_pred hcccCCC---ceeeeeCCCcCCHHHHcCCCCCCchhhhHHHHHHHHHHHhCCCCCCCCCHH-HHHHHHHHHhCCCCHHHH
Confidence 7643222 2345789999999998764 7899999999999999999999999763211 122222211100000000
Q ss_pred --hcccc----c---CchhhhhHHHHHHHHHHHHHHHhccccCcCCCCCHHHHHHH
Q 002021 910 --VDANL----L---SQEDIHFVAKEQCVSFVFNLAMECTMEFPKQRINAKEIVTK 956 (979)
Q Consensus 910 --~~~~~----~---~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~eil~~ 956 (979)
..+.. . .............++++.+|+.+||+.||++|||+.|+++|
T Consensus 282 ~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~Li~~~L~~dP~~R~t~~e~l~h 337 (420)
T 1j1b_A 282 REMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAH 337 (420)
T ss_dssp HHHCSCCCCCCCCCCCCCCHHHHSCTTSCHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred HhhChhhhhhccCccCCCCHHHhcCCCCCHHHHHHHHHhccCChhHCCCHHHHhCC
Confidence 00000 0 00000001112345779999999999999999999999976
No 261
>4exu_A Mitogen-activated protein kinase 13; P38 kinase, transferase; 1.70A {Homo sapiens} PDB: 4eyj_A* 4eym_A* 3coi_A
Probab=100.00 E-value=8e-37 Score=344.95 Aligned_cols=262 Identities=22% Similarity=0.255 Sum_probs=197.6
Q ss_pred hCCCCCCceeeeecceEEEEEE-cCCCcEEEEEEeccccc--cchhcHHHHHHHHHhcCCCCeeeEEEeeccCCee----
Q 002021 681 TDGFSENNLIGRGGFGSVYKAS-LGDGMEVAVKVFTSQCG--RAFKSFDVECEIMKSIRHRNLIKVISSCSNEEFK---- 753 (979)
Q Consensus 681 ~~~~~~~~~lG~G~~g~Vy~~~-~~~~~~vAvK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~---- 753 (979)
.+.|...+.||+|+||.||+|. ..+|+.||||++..... ...+.+.+|+.+++.++||||+++++++...+..
T Consensus 41 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 120 (371)
T 4exu_A 41 PKTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNFY 120 (371)
T ss_dssp ETTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSSTTCC
T ss_pred cccEEEEeEEecCCCeEEEEEEECCCCCEEEEEEecccccchhHHHHHHHHHHHHHhcCCCCchhhhhheeccCCcccce
Confidence 4678889999999999999995 55799999999975432 2346788999999999999999999999876654
Q ss_pred --EEEEEecCCCccceeeccCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCEEeCCCCcEEEEeeccccc
Q 002021 754 --ALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFSIAKM 831 (979)
Q Consensus 754 --~lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~i~H~Dik~~NIll~~~~~~kl~Dfg~~~~ 831 (979)
++||||++ ++|.+++.. .+++..+..++.|++.||+||| +++|+||||||+||+++.++.+||+|||+++.
T Consensus 121 ~~~lv~e~~~-~~l~~~~~~---~~~~~~~~~i~~qi~~aL~~LH---~~~ivH~Dikp~NIll~~~~~~kL~Dfg~a~~ 193 (371)
T 4exu_A 121 DFYLVMPFMQ-TDLQKIMGM---EFSEEKIQYLVYQMLKGLKYIH---SAGVVHRDLKPGNLAVNEDCELKILDFGLARH 193 (371)
T ss_dssp CCEEEEECCC-EEHHHHTTS---CCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEECTTCCEEECSTTCC--
T ss_pred eEEEEEcccc-ccHHHHhhc---CCCHHHHHHHHHHHHHHHHHHH---HCCCcCCCcCHHHeEECCCCCEEEEecCcccc
Confidence 99999997 588777643 4899999999999999999999 89999999999999999999999999999986
Q ss_pred cCCCCCcceecccccCCCCCCccccCC-CCCCCchhHHHHHHHHHHHHcCCCCCcccccCcchHhHhhhhhcCCccchhh
Q 002021 832 LTGEDQSMIQTQTLATIGYMAPEYGRE-GRVSANGDVYSFGIMLMETFTGKKPTDEIFNGEMTLKHWVNDWLPISTMEVV 910 (979)
Q Consensus 832 ~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwslG~il~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~ 910 (979)
.... .....+|+.|+|||++.+ ..++.++||||+||++|||++|+.||......+ .......... ....+..
T Consensus 194 ~~~~-----~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~-~~~~i~~~~~-~~~~~~~ 266 (371)
T 4exu_A 194 ADAE-----MTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLD-QLTQILKVTG-VPGTEFV 266 (371)
T ss_dssp -----------CTTCCCTTSCHHHHSCCSCCCTTHHHHHHHHHHHHHHHSSCSCCCSSHHH-HHHHHHHHHC-CCCHHHH
T ss_pred cccC-----cCCcccCccccCHHHhcCCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCChHH-HHHHHHHHhC-CCcHHHH
Confidence 5322 234578999999999877 678999999999999999999999997532111 1111111000 0000000
Q ss_pred c-----------ccccCch-hhhhHHHHHHHHHHHHHHHhccccCcCCCCCHHHHHHH
Q 002021 911 D-----------ANLLSQE-DIHFVAKEQCVSFVFNLAMECTMEFPKQRINAKEIVTK 956 (979)
Q Consensus 911 ~-----------~~~~~~~-~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~eil~~ 956 (979)
. ....... .........+++.+.+++.+|++.||++|||+.|+++|
T Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 324 (371)
T 4exu_A 267 QKLNDKAAKSYIQSLPQTPRKDFTQLFPRASPQAADLLEKMLELDVDKRLTAAQALTH 324 (371)
T ss_dssp TTCSCHHHHHHHHHSCCCCCCCHHHHSTTSCHHHHHHHHHHSCSCTTTSCCHHHHHTS
T ss_pred HHhhhhhhhhhhhccCCCcchhHHHhccccChHHHHHHHHHCCCChhhcCCHHHHhcC
Confidence 0 0000000 00011123456789999999999999999999999987
No 262
>4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis}
Probab=100.00 E-value=6.4e-37 Score=348.20 Aligned_cols=264 Identities=24% Similarity=0.314 Sum_probs=194.2
Q ss_pred CCCCCCceeeeecceEEEEEEcCCCcEEEEEEeccccccchhcHHHHHHHHHhcCCCCeeeEEEeeccCC------eeEE
Q 002021 682 DGFSENNLIGRGGFGSVYKASLGDGMEVAVKVFTSQCGRAFKSFDVECEIMKSIRHRNLIKVISSCSNEE------FKAL 755 (979)
Q Consensus 682 ~~~~~~~~lG~G~~g~Vy~~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~------~~~l 755 (979)
..|+..+.||+|+||.||+|+...+..||+|++.... +...+|+++++.++||||+++++++...+ ..++
T Consensus 40 ~~Y~~~~~lG~G~~g~V~~a~~~~~~~~aikk~~~~~----~~~~~E~~il~~l~h~niv~l~~~~~~~~~~~~~~~~~l 115 (394)
T 4e7w_A 40 IAYTNCKVIGNGSFGVVFQAKLVESDEVAIKKVLQDK----RFKNRELQIMRIVKHPNVVDLKAFFYSNGDKKDEVFLNL 115 (394)
T ss_dssp EEEEEEEEEEEETTEEEEEEEETTTEEEEEEEEECCT----TSCCHHHHHHHTCCCTTBCCEEEEEEEESSSSSCEEEEE
T ss_pred ceEEEeEEEeeCCCeEEEEEEECCCCeEEEEEEecCc----chHHHHHHHHHhCCCCCcceEEEEEEecCCCCCceEEEE
Confidence 4688899999999999999987666779999885432 22346999999999999999999984433 3789
Q ss_pred EEEecCCCccceee--ccCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCEEeC-CCCcEEEEeecccccc
Q 002021 756 VLEYMPHGSLEKYL--YSSNCILDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLD-DNMVAHLSDFSIAKML 832 (979)
Q Consensus 756 v~E~~~~g~L~~~l--~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~i~H~Dik~~NIll~-~~~~~kl~Dfg~~~~~ 832 (979)
||||++++.+.... ......+++..++.++.|+++||+||| +++|+||||||+||+++ .++.+||+|||+++..
T Consensus 116 v~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH---~~~ivHrDlkp~Nill~~~~~~~kL~DFG~a~~~ 192 (394)
T 4e7w_A 116 VLEYVPETVYRASRHYAKLKQTMPMLLIKLYMYQLLRSLAYIH---SIGICHRDIKPQNLLLDPPSGVLKLIDFGSAKIL 192 (394)
T ss_dssp EEECCSEEHHHHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEEETTTTEEEECCCTTCEEC
T ss_pred EeeccCccHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHH---HCCccCCCCCHHHEEEcCCCCcEEEeeCCCcccc
Confidence 99999874333222 122457899999999999999999999 99999999999999999 7999999999999876
Q ss_pred CCCCCcceecccccCCCCCCccccCCC-CCCCchhHHHHHHHHHHHHcCCCCCcccccCcchHhHhhhhhcCCcc--chh
Q 002021 833 TGEDQSMIQTQTLATIGYMAPEYGREG-RVSANGDVYSFGIMLMETFTGKKPTDEIFNGEMTLKHWVNDWLPIST--MEV 909 (979)
Q Consensus 833 ~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwslG~il~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~--~~~ 909 (979)
..... .....+|+.|+|||++.+. .++.++||||+||++|||++|+.||...... ............... ...
T Consensus 193 ~~~~~---~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~-~~l~~i~~~~g~p~~~~~~~ 268 (394)
T 4e7w_A 193 IAGEP---NVSYICSRYYRAPELIFGATNYTTNIDIWSTGCVMAELMQGQPLFPGESGI-DQLVEIIKVLGTPSREQIKT 268 (394)
T ss_dssp CTTCC---CCSSCSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHH-HHHHHHHHHHCCCCHHHHHH
T ss_pred cCCCC---CcccccCcCccCHHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHH-HHHHHHHHHhCCCCHHHHHh
Confidence 43322 2345789999999988664 5899999999999999999999999753221 111111111100000 000
Q ss_pred hcccc-------cCchhhhhHHHHHHHHHHHHHHHhccccCcCCCCCHHHHHHH
Q 002021 910 VDANL-------LSQEDIHFVAKEQCVSFVFNLAMECTMEFPKQRINAKEIVTK 956 (979)
Q Consensus 910 ~~~~~-------~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~eil~~ 956 (979)
..+.. ..........+..+++++.+++.+||+.||++|||+.|+++|
T Consensus 269 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h 322 (394)
T 4e7w_A 269 MNPNYMEHKFPQIRPHPFSKVFRPRTPPDAIDLISRLLEYTPSARLTAIEALCH 322 (394)
T ss_dssp HCGGGSSSCCCCCCCCCHHHHSCTTCCHHHHHHHHHHCCSSGGGSCCHHHHHTS
T ss_pred hChhhhhhccccccCCcHHHhccccCCHHHHHHHHHHhCCChhhCCCHHHHhcC
Confidence 00000 000001111122356789999999999999999999999987
No 263
>2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens}
Probab=100.00 E-value=7.5e-37 Score=338.34 Aligned_cols=269 Identities=21% Similarity=0.268 Sum_probs=196.3
Q ss_pred hCCCCCCceeeeecceEEEEEEc-CCCcEEEEEEeccccccchhcHHHHHHHHHhcCCCCeeeEEEeec-----------
Q 002021 681 TDGFSENNLIGRGGFGSVYKASL-GDGMEVAVKVFTSQCGRAFKSFDVECEIMKSIRHRNLIKVISSCS----------- 748 (979)
Q Consensus 681 ~~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~----------- 748 (979)
.++|+..+.||+|+||.||+|.. .+++.||||++........+.+.+|++++++++||||+++++++.
T Consensus 10 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~ 89 (320)
T 2i6l_A 10 GSRYMDLKPLGCGGNGLVFSAVDNDCDKRVAIKKIVLTDPQSVKHALREIKIIRRLDHDNIVKVFEILGPSGSQLTDDVG 89 (320)
T ss_dssp TTTEEEEEECC-----CEEEEEETTTTEEEEEEEEECCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEECTTSCBCCC---
T ss_pred CCceeEEEEeccCCCeEEEEEEECCCCeEEEEEEEecCChHHHHHHHHHHHHHHhcCCCCeeEEEEeccccccccccccc
Confidence 46788899999999999999955 468999999987655555678889999999999999999999873
Q ss_pred ---cCCeeEEEEEecCCCccceeeccCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCEEeC-CCCcEEEE
Q 002021 749 ---NEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLD-DNMVAHLS 824 (979)
Q Consensus 749 ---~~~~~~lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~i~H~Dik~~NIll~-~~~~~kl~ 824 (979)
+....++||||++ |+|.+++... .+++..++.++.|++.||+||| +++|+||||||+||+++ +++.+||+
T Consensus 90 ~~~~~~~~~lv~e~~~-~~L~~~~~~~--~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dlkp~Nil~~~~~~~~kl~ 163 (320)
T 2i6l_A 90 SLTELNSVYIVQEYME-TDLANVLEQG--PLLEEHARLFMYQLLRGLKYIH---SANVLHRDLKPANLFINTEDLVLKIG 163 (320)
T ss_dssp -CCSCSEEEEEEECCS-EEHHHHHTTC--CCCHHHHHHHHHHHHHHHHHHH---HTTCBCCCCSGGGEEEETTTTEEEEC
T ss_pred cccccCceeEEeeccC-CCHHHHhhcC--CccHHHHHHHHHHHHHHHHHHH---hCCEecCCCCHHHEEEcCCCCeEEEc
Confidence 4467899999997 5999988653 5899999999999999999999 99999999999999997 56799999
Q ss_pred eeccccccCCCCC-cceecccccCCCCCCccccCC-CCCCCchhHHHHHHHHHHHHcCCCCCcccccCcchHhHhhhhhc
Q 002021 825 DFSIAKMLTGEDQ-SMIQTQTLATIGYMAPEYGRE-GRVSANGDVYSFGIMLMETFTGKKPTDEIFNGEMTLKHWVNDWL 902 (979)
Q Consensus 825 Dfg~~~~~~~~~~-~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwslG~il~el~tg~~P~~~~~~~~~~~~~~~~~~~ 902 (979)
|||.+........ ........+|..|+|||.+.+ ..++.++||||+|+++|||++|+.||......+ ..........
T Consensus 164 Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~-~~~~~~~~~~ 242 (320)
T 2i6l_A 164 DFGLARIMDPHYSHKGHLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKTLFAGAHELE-QMQLILESIP 242 (320)
T ss_dssp CCTTCBCC--------CCCGGGSCCTTCCHHHHHCTTCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHH-HHHHHHHHSC
T ss_pred cCccccccCCCcccccccccccccccccCcHHhcCcccCCchhhhHhHHHHHHHHHhCCCCCCCCCHHH-HHHHHHHhcC
Confidence 9999987642211 112234567899999998765 678999999999999999999999997532211 1111111111
Q ss_pred CCccc---hh-------hcccccCchhhhhHHHHHHHHHHHHHHHhccccCcCCCCCHHHHHHH
Q 002021 903 PISTM---EV-------VDANLLSQEDIHFVAKEQCVSFVFNLAMECTMEFPKQRINAKEIVTK 956 (979)
Q Consensus 903 ~~~~~---~~-------~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~eil~~ 956 (979)
..... +. ..................++.++.+++.+|++.||++|||+.|+++|
T Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 306 (320)
T 2i6l_A 243 VVHEEDRQELLSVIPVYIRNDMTEPHKPLTQLLPGISREAVDFLEQILTFSPMDRLTAEEALSH 306 (320)
T ss_dssp CCCHHHHHHHHTTSCHHHHHHTTSCCCCHHHHSTTCCHHHHHHHHTTSCSSGGGSCCHHHHHTS
T ss_pred CCchhhhhhhhhcCcccccccccCCCCChhHhcchhhHHHHHHHHHHcCCCccccCCHHHHhCC
Confidence 00000 00 00000000000111123456789999999999999999999999886
No 264
>1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B
Probab=100.00 E-value=2.3e-36 Score=335.39 Aligned_cols=269 Identities=24% Similarity=0.301 Sum_probs=203.7
Q ss_pred hhCCCCCCceeeeecceEEEEEEc--CCCcEEEEEEeccccc--cchhcHHHHHHHHHhc---CCCCeeeEEEeec----
Q 002021 680 ATDGFSENNLIGRGGFGSVYKASL--GDGMEVAVKVFTSQCG--RAFKSFDVECEIMKSI---RHRNLIKVISSCS---- 748 (979)
Q Consensus 680 ~~~~~~~~~~lG~G~~g~Vy~~~~--~~~~~vAvK~~~~~~~--~~~~~~~~E~~~l~~l---~h~niv~l~~~~~---- 748 (979)
..++|+..+.||+|+||.||+|.. .+|+.||||++..... .....+.+|+++++.+ +||||+++++++.
T Consensus 9 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~~ 88 (326)
T 1blx_A 9 ADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRT 88 (326)
T ss_dssp GGGTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEEEEEBCTTSCBCTHHHHHHHHHHHHHTCCTTBCCEEEEEEEEEC
T ss_pred chhceeeeeeecccccEEEEEEEecCCCCEEEEEEEeccCcccccCCchhhHHHHHHHhhhccCCCCeEeeeeeeeeccc
Confidence 457899999999999999999965 5789999999865432 2345677888888877 8999999999986
Q ss_pred -cCCeeEEEEEecCCCccceeeccCC-CCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCEEeCCCCcEEEEee
Q 002021 749 -NEEFKALVLEYMPHGSLEKYLYSSN-CILDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDF 826 (979)
Q Consensus 749 -~~~~~~lv~E~~~~g~L~~~l~~~~-~~l~~~~~~~i~~~ia~~L~~LH~~~~~~i~H~Dik~~NIll~~~~~~kl~Df 826 (979)
.....++||||++ |+|.+++.... ..+++..++.++.|++.||+||| +++|+||||||+||+++.++.+||+||
T Consensus 89 ~~~~~~~lv~e~~~-~~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~lH---~~gi~H~dlkp~Nili~~~~~~kl~Df 164 (326)
T 1blx_A 89 DRETKLTLVFEHVD-QDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLH---SHRVVHRDLKPQNILVTSSGQIKLADF 164 (326)
T ss_dssp SSEEEEEEEEECCS-CBHHHHHHHSCTTCSCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEECTTCCEEECSC
T ss_pred CCCceEEEEEecCC-CCHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHH---HCCceeccCCHHHeEEcCCCCEEEecC
Confidence 5677899999998 59999987653 35899999999999999999999 999999999999999999999999999
Q ss_pred ccccccCCCCCcceecccccCCCCCCccccCCCCCCCchhHHHHHHHHHHHHcCCCCCcccccCcchHhHhhhhhcCCc-
Q 002021 827 SIAKMLTGEDQSMIQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFTGKKPTDEIFNGEMTLKHWVNDWLPIS- 905 (979)
Q Consensus 827 g~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~- 905 (979)
|.+...... .......+|+.|+|||.+.+..++.++||||+|+++|||++|+.||......+ .....+.......
T Consensus 165 g~~~~~~~~---~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~-~~~~i~~~~~~~~~ 240 (326)
T 1blx_A 165 GLARIYSFQ---MALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVD-QLGKILDVIGLPGE 240 (326)
T ss_dssp CSCCCCCGG---GGGCCCCCCCTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHH-HHHHHHHHHCCCCG
T ss_pred cccccccCC---CCccccccccceeCHHHHhcCCCCcchhHHHHHHHHHHHHcCCCCCCCCCHHH-HHHHHHHHcCCCCc
Confidence 999865322 12244578999999999998899999999999999999999999997532211 1111111100000
Q ss_pred --cch-h--hcccccCc-hhhhhHHHHHHHHHHHHHHHhccccCcCCCCCHHHHHHH
Q 002021 906 --TME-V--VDANLLSQ-EDIHFVAKEQCVSFVFNLAMECTMEFPKQRINAKEIVTK 956 (979)
Q Consensus 906 --~~~-~--~~~~~~~~-~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~eil~~ 956 (979)
... . ........ ..........++..+.+++.+||..||++|||+.|+++|
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~h 297 (326)
T 1blx_A 241 EDWPRDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALSH 297 (326)
T ss_dssp GGSCTTCSSCGGGSCCCCCCCGGGTCCSCCHHHHHHHHHHSCSSTTTSCCHHHHHTS
T ss_pred ccCccccccchhhhcccCcchhhhccccCCHHHHHHHHHHcCCCcccCCCHHHHhcC
Confidence 000 0 00000000 000001123456778999999999999999999999875
No 265
>2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A*
Probab=100.00 E-value=1.1e-36 Score=331.23 Aligned_cols=253 Identities=22% Similarity=0.298 Sum_probs=202.9
Q ss_pred HhhCCCCCCceeeeecceEEEEEEc-CCCcEEEEEEecccc--ccchhcHHHHHHHHHhcCCCCeeeEEEeeccCCeeEE
Q 002021 679 RATDGFSENNLIGRGGFGSVYKASL-GDGMEVAVKVFTSQC--GRAFKSFDVECEIMKSIRHRNLIKVISSCSNEEFKAL 755 (979)
Q Consensus 679 ~~~~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vAvK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 755 (979)
...++|+..+.||+|+||.||+|.. .+++.||||++.... ....+.+.+|++++++++||||+++++++.+.+..++
T Consensus 19 ~~~~~y~i~~~lg~G~~g~V~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l 98 (287)
T 2wei_A 19 TFAERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILEDSSSFYI 98 (287)
T ss_dssp HHHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGBSSSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEE
T ss_pred HHhhcceeeEEEcCCCCEEEEEEEEcCCCcEEEEEEecccccchHHHHHHHHHHHHHHhccCCCccEEEEEEeCCCeEEE
Confidence 3446799999999999999999955 478999999986543 2345678899999999999999999999999999999
Q ss_pred EEEecCCCccceeeccCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCEEeCCC---CcEEEEeecccccc
Q 002021 756 VLEYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDN---MVAHLSDFSIAKML 832 (979)
Q Consensus 756 v~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~i~H~Dik~~NIll~~~---~~~kl~Dfg~~~~~ 832 (979)
||||+++++|.+++.... .+++.+++.++.|++.||+||| +++|+||||||+||+++.+ +.+||+|||++...
T Consensus 99 v~e~~~~~~L~~~l~~~~-~~~~~~~~~i~~qi~~~l~~LH---~~~i~H~dl~p~NIlv~~~~~~~~~kL~Dfg~~~~~ 174 (287)
T 2wei_A 99 VGELYTGGELFDEIIKRK-RFSEHDAARIIKQVFSGITYMH---KHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCF 174 (287)
T ss_dssp EECCCCSCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEESCSSTTCCEEECSTTGGGTB
T ss_pred EEEccCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---HCCeeccCCChhhEEEecCCCcccEEEeccCcceee
Confidence 999999999998886543 6899999999999999999999 9999999999999999754 47999999999876
Q ss_pred CCCCCcceecccccCCCCCCccccCCCCCCCchhHHHHHHHHHHHHcCCCCCcccccCcchHhHhhhhhcCCccchhhcc
Q 002021 833 TGEDQSMIQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFTGKKPTDEIFNGEMTLKHWVNDWLPISTMEVVDA 912 (979)
Q Consensus 833 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 912 (979)
..... .....+|+.|+|||.+.+ .++.++||||+|+++|+|++|+.||...... .....+....
T Consensus 175 ~~~~~---~~~~~~~~~y~aPE~~~~-~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~--~~~~~~~~~~---------- 238 (287)
T 2wei_A 175 QQNTK---MKDRIGTAYYIAPEVLRG-TYDEKCDVWSAGVILYILLSGTPPFYGKNEY--DILKRVETGK---------- 238 (287)
T ss_dssp CCCSS---CSCHHHHHTTCCHHHHTT-CCCTHHHHHHHHHHHHHHHHSSCSSCCSSHH--HHHHHHHHCC----------
T ss_pred cCCCc---cccccCcccccChHHhcC-CCCCchhhHhHHHHHHHHHhCCCCCCCCCHH--HHHHHHHcCC----------
Confidence 43221 233458899999998865 4899999999999999999999998753211 1111110000
Q ss_pred cccCchhhhhHHHHHHHHHHHHHHHhccccCcCCCCCHHHHHHH
Q 002021 913 NLLSQEDIHFVAKEQCVSFVFNLAMECTMEFPKQRINAKEIVTK 956 (979)
Q Consensus 913 ~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~eil~~ 956 (979)
.....+....++.++.+++.+|+..||++|||+.|++++
T Consensus 239 -----~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~h 277 (287)
T 2wei_A 239 -----YAFDLPQWRTISDDAKDLIRKMLTFHPSLRITATQCLEH 277 (287)
T ss_dssp -----CCCCSGGGTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHS
T ss_pred -----CCCCchhhhhcCHHHHHHHHHHcccChhhCcCHHHHhcC
Confidence 000011123445678999999999999999999999986
No 266
>3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=100.00 E-value=1.5e-35 Score=356.19 Aligned_cols=347 Identities=17% Similarity=0.171 Sum_probs=218.5
Q ss_pred cccCCCCCCCc----cceeEeeCCCCcEEEEEecCCCccccCCCCCcCCCCCCeeeccCCcccccCCccccccCcccEEe
Q 002021 51 KNWNTSTPVCN----WTGVACEVHSQRVTVLNISSLNLTGTIPSQLGNLSSLQSLNLSFNRLFGSIPSAIFTTYTLKYVC 126 (979)
Q Consensus 51 ~~w~~~~~~c~----w~gv~c~~~~~~v~~l~l~~~~l~g~~~~~l~~l~~L~~L~L~~n~~~~~~p~~~~~l~~L~~L~ 126 (979)
++|..+.+||. |.++.|+. .++......... ..-..+++++.|++++|.+++..|..+..+++|++|+
T Consensus 10 ~~~~~~~~C~~~~~~~~c~~~~~------~i~~~~~~~~~~--~~~l~l~~l~~l~l~~~~l~~lp~~~~~~l~~L~~L~ 81 (597)
T 3oja_B 10 KPRQPEYKCIDSNLQYDCVFYDV------HIDMQTQDVYFG--FEDITLNNQKIVTFKNSTMRKLPAALLDSFRQVELLN 81 (597)
T ss_dssp -CCCSEECCCCC--CCSEEECSC------EECSSCCCCEES--CSSGGGCCCSEEEESSCEESEECTHHHHHCCCCSEEE
T ss_pred cCCCCCCcCcccCcCceeEecCc------eecccccccccC--cccccCCCceEEEeeCCCCCCcCHHHHccCCCCcEEE
Confidence 58988888874 66666542 111111111111 1122467888888888888754444567788888888
Q ss_pred cccccccccCCccccCCCCCcEEEccCCccCchhhhhhhccCCcccCCCCccceeecccccccccccccccCCCCCCcee
Q 002021 127 LRGNQLSGTFPSFISNKSSLQHLDLSSNALSGEIRANICREIPREFGNLPELELMSLAANNLQGKIPLKIGNLRNLEKLD 206 (979)
Q Consensus 127 L~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~~ip~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ 206 (979)
|++|.+++..|..|+.+++|++|+|++|.+++. .|..|+++++|++|+|++|.+++..+..|+++++|++|+
T Consensus 82 L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~--------~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~l~~L~~L~ 153 (597)
T 3oja_B 82 LNDLQIEEIDTYAFAYAHTIQKLYMGFNAIRYL--------PPHVFQNVPLLTVLVLERNDLSSLPRGIFHNTPKLTTLS 153 (597)
T ss_dssp CTTSCCCEECTTTTTTCTTCCEEECCSSCCCCC--------CTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEE
T ss_pred CCCCCCCCCChHHhcCCCCCCEEECCCCcCCCC--------CHHHHcCCCCCCEEEeeCCCCCCCCHHHhccCCCCCEEE
Confidence 888888887777888888888888888888753 455678888888888888888766666667888888888
Q ss_pred cCCCeeeecCCccccccCccceeeccCCCCcCCCcccccCCCCCcCEEEccCCccccccCcccccCCCCcEEeccccccc
Q 002021 207 IGDNKLVGIAPIAIFNVSTLKILGLQDNSLSGCLSSIGYARLPNLEILSLWGNNFSGTIPRFIFNASKLSILDLEGNSFS 286 (979)
Q Consensus 207 Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~ 286 (979)
|++|+++++.|..|.++++|+.|+|++|.+++.. +..+++|+.|++++|.++
T Consensus 154 Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~----------------------------~~~l~~L~~L~l~~n~l~ 205 (597)
T 3oja_B 154 MSNNNLERIEDDTFQATTSLQNLQLSSNRLTHVD----------------------------LSLIPSLFHANVSYNLLS 205 (597)
T ss_dssp CCSSCCCBCCTTTTTTCTTCCEEECTTSCCSBCC----------------------------GGGCTTCSEEECCSSCCS
T ss_pred eeCCcCCCCChhhhhcCCcCcEEECcCCCCCCcC----------------------------hhhhhhhhhhhcccCccc
Confidence 8888888777777766666666666666665432 223344555555555444
Q ss_pred cccCccccccccccceeccccccccccchhhhhhcccCCCCccEEEccCCCCcccCCccccccccccccEEEccCccccC
Q 002021 287 GFIPNTFGNLRNLSWLVLSDNYLTSSTQELSFLSSLSNCKFLKYFDLSYNPLYRILPRTTVGNLSHSLEEFKMSNCNISG 366 (979)
Q Consensus 287 ~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~~L~~L~L~~n~i~~ 366 (979)
+. ...++|+.|++++|.++..+.. .+.+|+.|+|++|.+++
T Consensus 206 ~l-----~~~~~L~~L~ls~n~l~~~~~~----------------------------------~~~~L~~L~L~~n~l~~ 246 (597)
T 3oja_B 206 TL-----AIPIAVEELDASHNSINVVRGP----------------------------------VNVELTILKLQHNNLTD 246 (597)
T ss_dssp EE-----ECCTTCSEEECCSSCCCEEECS----------------------------------CCSCCCEEECCSSCCCC
T ss_pred cc-----cCCchhheeeccCCcccccccc----------------------------------cCCCCCEEECCCCCCCC
Confidence 21 1122344444444444332211 01123333344443332
Q ss_pred CCCccccCCCcccEEEecCCCCCchhHHhhhcCCCCcEEEecCcccCCCccccccCCCCCceEecCCCcccccCCccccC
Q 002021 367 GIPEEISNLTNLRTIYLGGNKLNGSILITLSKLQKLQDLGLKDNKLEGSIPYDICNLAELYRLDLDGNKLSGSIPACFSN 446 (979)
Q Consensus 367 ~~p~~l~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~ 446 (979)
+..+.. +++|+.|++++|.+.+..|..|+.+++|+.|+|++|++++ +|..+..
T Consensus 247 --~~~l~~------------------------l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~-l~~~~~~ 299 (597)
T 3oja_B 247 --TAWLLN------------------------YPGLVEVDLSYNELEKIMYHPFVKMQRLERLYISNNRLVA-LNLYGQP 299 (597)
T ss_dssp --CGGGGG------------------------CTTCSEEECCSSCCCEEESGGGTTCSSCCEEECTTSCCCE-EECSSSC
T ss_pred --Chhhcc------------------------CCCCCEEECCCCccCCCCHHHhcCccCCCEEECCCCCCCC-CCccccc
Confidence 133444 4444444444444544555556666666666666666664 3555566
Q ss_pred CCcCceEecCCCccccccccccCcCCCcEEEeccccccCCCccccccccccceEeccCCccCcc
Q 002021 447 LTSLRIVSLGSNELTSIPLTFWNLKDILNLNFSSNFLTGSLPLEIGSLKVLVGIDLSRNNFSGV 510 (979)
Q Consensus 447 l~~L~~L~L~~N~l~~lp~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~ 510 (979)
+++|+.|+|++|.++.+|..+..+++|+.|++++|.+++. | +..+++|+.|+|++|.+++.
T Consensus 300 l~~L~~L~Ls~N~l~~i~~~~~~l~~L~~L~L~~N~l~~~-~--~~~~~~L~~L~l~~N~~~~~ 360 (597)
T 3oja_B 300 IPTLKVLDLSHNHLLHVERNQPQFDRLENLYLDHNSIVTL-K--LSTHHTLKNLTLSHNDWDCN 360 (597)
T ss_dssp CTTCCEEECCSSCCCCCGGGHHHHTTCSEEECCSSCCCCC-C--CCTTCCCSEEECCSSCEEHH
T ss_pred CCCCcEEECCCCCCCccCcccccCCCCCEEECCCCCCCCc-C--hhhcCCCCEEEeeCCCCCCh
Confidence 7777777777777777777777778888888888888754 2 66778889999999998754
No 267
>3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens}
Probab=100.00 E-value=1.8e-36 Score=346.53 Aligned_cols=268 Identities=20% Similarity=0.241 Sum_probs=183.1
Q ss_pred CCCC-CceeeeecceEEEEEEcC---CCcEEEEEEeccccccchhcHHHHHHHHHhcCCCCeeeEEEee--ccCCeeEEE
Q 002021 683 GFSE-NNLIGRGGFGSVYKASLG---DGMEVAVKVFTSQCGRAFKSFDVECEIMKSIRHRNLIKVISSC--SNEEFKALV 756 (979)
Q Consensus 683 ~~~~-~~~lG~G~~g~Vy~~~~~---~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~--~~~~~~~lv 756 (979)
.|+. .++||+|+||.||+|... +++.||||++... .....+.+|+++++.++||||+++++++ ......++|
T Consensus 21 ~y~~~g~~lG~G~~g~Vy~~~~~~~~~~~~vaiK~~~~~--~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~lv 98 (405)
T 3rgf_A 21 LFEYEGCKVGRGTYGHVYKAKRKDGKDDKDYALKQIEGT--GISMSACREIALLRELKHPNVISLQKVFLSHADRKVWLL 98 (405)
T ss_dssp HEECSSCCCC-----EEEEEEESSSSCCCCEEEEECSSS--SCCHHHHHHHHHHHHCCCTTBCCCCEEEEETTTTEEEEE
T ss_pred hhhhcCcEeeecCCeEEEEEEEccCCCCeEEEEEEECCC--CCCHHHHHHHHHHHhcCCCCeeeEeeEEecCCCCeEEEE
Confidence 3544 568999999999999754 5788999998644 2345688999999999999999999998 457789999
Q ss_pred EEecCCCccceeeccC--------CCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCEEe----CCCCcEEEE
Q 002021 757 LEYMPHGSLEKYLYSS--------NCILDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLL----DDNMVAHLS 824 (979)
Q Consensus 757 ~E~~~~g~L~~~l~~~--------~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~i~H~Dik~~NIll----~~~~~~kl~ 824 (979)
|||+++ +|.+++... ...+++..++.++.||+.||+||| +++|+||||||+||++ +.++.+||+
T Consensus 99 ~e~~~~-~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH---~~~ivH~Dlkp~NIll~~~~~~~~~~kl~ 174 (405)
T 3rgf_A 99 FDYAEH-DLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLH---ANWVLHRDLKPANILVMGEGPERGRVKIA 174 (405)
T ss_dssp EECCSE-EHHHHHHHHHHHC-------CCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEECCSSTTTTCEEEC
T ss_pred EeCCCC-CHHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHH---hCCEeCCCcCHHHeEEecCCCCCCcEEEE
Confidence 999964 887776532 224899999999999999999999 9999999999999999 678899999
Q ss_pred eeccccccCCCCC-cceecccccCCCCCCccccCCC-CCCCchhHHHHHHHHHHHHcCCCCCcccccCc--------chH
Q 002021 825 DFSIAKMLTGEDQ-SMIQTQTLATIGYMAPEYGREG-RVSANGDVYSFGIMLMETFTGKKPTDEIFNGE--------MTL 894 (979)
Q Consensus 825 Dfg~~~~~~~~~~-~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwslG~il~el~tg~~P~~~~~~~~--------~~~ 894 (979)
|||+++....... ........||+.|+|||++.+. .++.++||||+||++|||++|+.||....... ..+
T Consensus 175 Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~~~~~~~l 254 (405)
T 3rgf_A 175 DMGFARLFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPYHHDQL 254 (405)
T ss_dssp CTTCCC----------------CCCTTCCHHHHTTCCSCCHHHHHHHHHHHHHHHHHSSCTTCCCC------CCCCHHHH
T ss_pred ECCCceecCCCCcccccCCCceecCcccCchhhcCCCcccchhhhHHHHHHHHHHHhCCCCCCCccccccccccchHHHH
Confidence 9999987643221 1223456789999999998774 58999999999999999999999996532210 111
Q ss_pred hHhhhhhc---CCccchhhccc-------ccCchhh------hh--HHHHHHHHHHHHHHHhccccCcCCCCCHHHHHHH
Q 002021 895 KHWVNDWL---PISTMEVVDAN-------LLSQEDI------HF--VAKEQCVSFVFNLAMECTMEFPKQRINAKEIVTK 956 (979)
Q Consensus 895 ~~~~~~~~---~~~~~~~~~~~-------~~~~~~~------~~--~~~~~~~~~l~~l~~~cl~~dP~~Rps~~eil~~ 956 (979)
........ ...+..+.... ....... .. ......+..+.+|+.+|++.||++|||++|+++|
T Consensus 255 ~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~~~L~~dP~~R~ta~e~L~h 334 (405)
T 3rgf_A 255 DRIFNVMGFPADKDWEDIKKMPEHSTLMKDFRRNTYTNCSLIKYMEKHKVKPDSKAFHLLQKLLTMDPIKRITSEQAMQD 334 (405)
T ss_dssp HHHHHHHCCCCTTTCGGGGGSTTHHHHHHHCCGGGGTTCCHHHHHHTTTCCTTSHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred HHHHHhhCCCChhhcchhhcCcchhhhhhhccccCCCcchhhhhHhhcCCCCCHHHHHHHHHHccCCcccCCCHHHHhcC
Confidence 11111000 00010000000 0000000 00 0000114568899999999999999999999987
No 268
>1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase, splicing, human, 10Z-hymendialdisine, structural genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A*
Probab=100.00 E-value=2.1e-36 Score=337.67 Aligned_cols=265 Identities=19% Similarity=0.264 Sum_probs=202.8
Q ss_pred hCCCCCCceeeeecceEEEEEEc--CCCcEEEEEEeccccccchhcHHHHHHHHHhcCCCC------eeeEEEeeccCCe
Q 002021 681 TDGFSENNLIGRGGFGSVYKASL--GDGMEVAVKVFTSQCGRAFKSFDVECEIMKSIRHRN------LIKVISSCSNEEF 752 (979)
Q Consensus 681 ~~~~~~~~~lG~G~~g~Vy~~~~--~~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~h~n------iv~l~~~~~~~~~ 752 (979)
.++|+..+.||+|+||.||+|.. .+++.||||++... ....+.+.+|+++++.++|++ ++++++++.+.+.
T Consensus 13 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~-~~~~~~~~~e~~~l~~l~~~~~~~~~~i~~~~~~~~~~~~ 91 (339)
T 1z57_A 13 SARYEIVDTLGEGAFGKVVECIDHKAGGRHVAVKIVKNV-DRYCEAARSEIQVLEHLNTTDPNSTFRCVQMLEWFEHHGH 91 (339)
T ss_dssp TTTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEECSS-HHHHHHHHHHHHHHHHHHHHCTTCTTCBCCEEEEEEETTE
T ss_pred cCceEEEEEEecCCCeEEEEEEecCCCCcEEEEEEEecC-CchhHHHHHHHHHHHHhhhcCCCCceeeEeeecccccCCc
Confidence 36789999999999999999954 47899999998643 234567888999999987654 9999999999999
Q ss_pred eEEEEEecCCCccceeeccCC-CCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCEEeCC--------------
Q 002021 753 KALVLEYMPHGSLEKYLYSSN-CILDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDD-------------- 817 (979)
Q Consensus 753 ~~lv~E~~~~g~L~~~l~~~~-~~l~~~~~~~i~~~ia~~L~~LH~~~~~~i~H~Dik~~NIll~~-------------- 817 (979)
.++||||+ +++|.+++.... ..+++.+++.++.|++.||+||| +++|+||||||+||+++.
T Consensus 92 ~~lv~e~~-~~~l~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~lH---~~~ivH~Dlkp~Nil~~~~~~~~~~~~~~~~~ 167 (339)
T 1z57_A 92 ICIVFELL-GLSTYDFIKENGFLPFRLDHIRKMAYQICKSVNFLH---SNKLTHTDLKPENILFVQSDYTEAYNPKIKRD 167 (339)
T ss_dssp EEEEEECC-CCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEESCCCEEEEEC----CE
T ss_pred EEEEEcCC-CCCHHHHHHhcCCCCCcHHHHHHHHHHHHHHHHHHH---HCCCcCCCCCHHHEEEeccccccccCCccccc
Confidence 99999999 889999987653 36899999999999999999999 999999999999999987
Q ss_pred -----CCcEEEEeeccccccCCCCCcceecccccCCCCCCccccCCCCCCCchhHHHHHHHHHHHHcCCCCCcccccCcc
Q 002021 818 -----NMVAHLSDFSIAKMLTGEDQSMIQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFTGKKPTDEIFNGEM 892 (979)
Q Consensus 818 -----~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~tg~~P~~~~~~~~~ 892 (979)
++.+||+|||.+...... .....||+.|+|||++.+..++.++||||+||++|||++|+.||......+
T Consensus 168 ~~~~~~~~~kl~Dfg~~~~~~~~-----~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~- 241 (339)
T 1z57_A 168 ERTLINPDIKVVDFGSATYDDEH-----HSTLVSTRHYRAPEVILALGWSQPCDVWSIGCILIEYYLGFTVFPTHDSKE- 241 (339)
T ss_dssp EEEESCCCEEECCCSSCEETTSC-----CCSSCSCGGGCCHHHHTTSCCCTHHHHHHHHHHHHHHHHSSCSCCCSCHHH-
T ss_pred cccccCCCceEeeCcccccCccc-----cccccCCccccChHHhhCCCCCcchhhHHHHHHHHHHHhCCCCCCCCChHH-
Confidence 668999999999865322 234578999999999998899999999999999999999999997532211
Q ss_pred hHhHhhhhhcCCc--cch------hhc---c-------------cccCchhhhhHHHHHHHHHHHHHHHhccccCcCCCC
Q 002021 893 TLKHWVNDWLPIS--TME------VVD---A-------------NLLSQEDIHFVAKEQCVSFVFNLAMECTMEFPKQRI 948 (979)
Q Consensus 893 ~~~~~~~~~~~~~--~~~------~~~---~-------------~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rp 948 (979)
..........+.. ... ... . ...............+++++.+++.+||+.||++||
T Consensus 242 ~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rp 321 (339)
T 1z57_A 242 HLAMMERILGPLPKHMIQKTRKRKYFHHDRLDWDEHSSAGRYVSRACKPLKEFMLSQDVEHERLFDLIQKMLEYDPAKRI 321 (339)
T ss_dssp HHHHHHHHHCSCCHHHHHHCSCGGGEETTEECCCTTSHHHHHHHHHCCCGGGGCSCCSHHHHHHHHHHHHHTCSSTTTSC
T ss_pred HHHHHHHHhCCCCHHHHhhccchhHHhhccccccccccccchhhhcCcchhhhcccchhhHHHHHHHHHHHhCcCccccc
Confidence 1111111000000 000 000 0 000000000111234567899999999999999999
Q ss_pred CHHHHHHH
Q 002021 949 NAKEIVTK 956 (979)
Q Consensus 949 s~~eil~~ 956 (979)
|+.|+++|
T Consensus 322 t~~ell~h 329 (339)
T 1z57_A 322 TLREALKH 329 (339)
T ss_dssp CHHHHTTS
T ss_pred CHHHHhcC
Confidence 99999976
No 269
>2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A*
Probab=100.00 E-value=1.1e-36 Score=342.09 Aligned_cols=269 Identities=23% Similarity=0.238 Sum_probs=200.2
Q ss_pred hCCCCCCceeeeecceEEEEEEc-CCCcEEEEEEeccccc-cchhcHHHHHHHHHhcCCCCeeeEEEeeccC-----Cee
Q 002021 681 TDGFSENNLIGRGGFGSVYKASL-GDGMEVAVKVFTSQCG-RAFKSFDVECEIMKSIRHRNLIKVISSCSNE-----EFK 753 (979)
Q Consensus 681 ~~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vAvK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~-----~~~ 753 (979)
.++|+..+.||+|+||.||+|.. .+|+.||||++..... .....+.+|+++++.++||||+++++++..+ ...
T Consensus 10 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~ 89 (353)
T 2b9h_A 10 SSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHFKHENIITIFNIQRPDSFENFNEV 89 (353)
T ss_dssp CTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCCSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCSTTCCCE
T ss_pred ccceEEeeEEcCCCCeEEEEEEECCCCcEEEEEeecccccchHHHHHHHHHHHHHhCcCCCcCCeeeeecccccCccceE
Confidence 46788999999999999999964 5789999999864332 2345678899999999999999999987654 678
Q ss_pred EEEEEecCCCccceeeccCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCEEeCCCCcEEEEeeccccccC
Q 002021 754 ALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFSIAKMLT 833 (979)
Q Consensus 754 ~lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~i~H~Dik~~NIll~~~~~~kl~Dfg~~~~~~ 833 (979)
++||||++ ++|.+++... .+++..+..++.|++.||+||| +++|+||||||+||+++.++.+||+|||++....
T Consensus 90 ~lv~e~~~-~~L~~~~~~~--~~~~~~~~~~~~qi~~~L~~LH---~~~ivH~Dlkp~Nil~~~~~~~kl~Dfg~a~~~~ 163 (353)
T 2b9h_A 90 YIIQELMQ-TDLHRVISTQ--MLSDDHIQYFIYQTLRAVKVLH---GSNVIHRDLKPSNLLINSNCDLKVCDFGLARIID 163 (353)
T ss_dssp EEEECCCS-EEHHHHHHHC--CCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCCGGGEEECTTCCEEECCCTTCEECC
T ss_pred EEEEeccC-ccHHHHHhhc--CCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCHHHeEEcCCCcEEEEecccccccc
Confidence 99999997 5899888764 5899999999999999999999 9999999999999999999999999999998764
Q ss_pred CCCCcc--------eecccccCCCCCCccccCC-CCCCCchhHHHHHHHHHHHHcCCCCCcccccCcchHhHhhhhhc-C
Q 002021 834 GEDQSM--------IQTQTLATIGYMAPEYGRE-GRVSANGDVYSFGIMLMETFTGKKPTDEIFNGEMTLKHWVNDWL-P 903 (979)
Q Consensus 834 ~~~~~~--------~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwslG~il~el~tg~~P~~~~~~~~~~~~~~~~~~~-~ 903 (979)
...... ......||+.|+|||++.+ ..++.++||||+||++|||++|+.||......+ .......... +
T Consensus 164 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~-~~~~~~~~~~~~ 242 (353)
T 2b9h_A 164 ESAADNSEPTGQQSGMVEFVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRDYRH-QLLLIFGIIGTP 242 (353)
T ss_dssp ----------------CCCCCCGGGCCHHHHHSCCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHH-HHHHHHHHHCCC
T ss_pred cccccccCccccccchhhccccccccCCeeeccCCCccchhhHHHHHHHHHHHHhCCCCCCCCCcHH-HHHHHHHHhCCC
Confidence 322111 1123468999999998654 678999999999999999999999997532111 1111111000 0
Q ss_pred --Cccch---------hhcccccCchhhhhHHHHHHHHHHHHHHHhccccCcCCCCCHHHHHHH
Q 002021 904 --ISTME---------VVDANLLSQEDIHFVAKEQCVSFVFNLAMECTMEFPKQRINAKEIVTK 956 (979)
Q Consensus 904 --~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~eil~~ 956 (979)
..... ...................+++++.+++.+||+.||++|||+.|+++|
T Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 306 (353)
T 2b9h_A 243 HSDNDLRCIESPRAREYIKSLPMYPAAPLEKMFPRVNPKGIDLLQRMLVFDPAKRITAKEALEH 306 (353)
T ss_dssp CSTTTTTTCCCHHHHHHHHTSCCCCCCCHHHHSTTSCHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred chhccccccccchhhHHhhcccCCCCcchhhhcccCCHHHHHHHHHhcCcCcccCCCHHHHhcC
Confidence 00000 000000000000011123466789999999999999999999999985
No 270
>3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A*
Probab=100.00 E-value=1.4e-36 Score=338.14 Aligned_cols=253 Identities=20% Similarity=0.247 Sum_probs=174.7
Q ss_pred hCCCCCCc-eeeeecceEEEEEEc-CCCcEEEEEEeccccccchhcHHHHHHHHHhcCCCCeeeEEEeecc----CCeeE
Q 002021 681 TDGFSENN-LIGRGGFGSVYKASL-GDGMEVAVKVFTSQCGRAFKSFDVECEIMKSIRHRNLIKVISSCSN----EEFKA 754 (979)
Q Consensus 681 ~~~~~~~~-~lG~G~~g~Vy~~~~-~~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~----~~~~~ 754 (979)
.++|...+ .||+|+||.||+|.. .+|+.||||++.... ....+....++.++||||+++++++.. ....+
T Consensus 27 ~~~y~i~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~----~~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~ 102 (336)
T 3fhr_A 27 TDDYQLSKQVLGLGVNGKVLECFHRRTGQKCALKLLYDSP----KARQEVDHHWQASGGPHIVCILDVYENMHHGKRCLL 102 (336)
T ss_dssp GGTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEESSH----HHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEEE
T ss_pred cceeEecceeeeeCCCeEEEEEEECCCCCEEEEEEecCcH----HHHHHHHHHHHhcCCCChHHHHHHHhhccCCCceEE
Confidence 46788754 699999999999954 479999999986431 222223344667799999999999865 45689
Q ss_pred EEEEecCCCccceeeccCC-CCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCEEeCC---CCcEEEEeecccc
Q 002021 755 LVLEYMPHGSLEKYLYSSN-CILDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDD---NMVAHLSDFSIAK 830 (979)
Q Consensus 755 lv~E~~~~g~L~~~l~~~~-~~l~~~~~~~i~~~ia~~L~~LH~~~~~~i~H~Dik~~NIll~~---~~~~kl~Dfg~~~ 830 (979)
+||||+++|+|.+++.... ..+++.+++.++.|++.||+||| +++|+||||||+||+++. ++.+||+|||++.
T Consensus 103 lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~ql~~~l~~LH---~~~ivH~dlkp~NIll~~~~~~~~~kl~Dfg~~~ 179 (336)
T 3fhr_A 103 IIMECMEGGELFSRIQERGDQAFTEREAAEIMRDIGTAIQFLH---SHNIAHRDVKPENLLYTSKEKDAVLKLTDFGFAK 179 (336)
T ss_dssp EEEECCTTEEHHHHHHTC-CCCCBHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEESCSSTTCCEEECCCTTCE
T ss_pred EEEeccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCHHHEEEEecCCCceEEEeccccce
Confidence 9999999999999998653 46999999999999999999999 899999999999999986 4559999999998
Q ss_pred ccCCCCCcceecccccCCCCCCccccCCCCCCCchhHHHHHHHHHHHHcCCCCCcccccCcchHhHhhhhhcCCccchhh
Q 002021 831 MLTGEDQSMIQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFTGKKPTDEIFNGEMTLKHWVNDWLPISTMEVV 910 (979)
Q Consensus 831 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~ 910 (979)
...... .....+|+.|+|||++.+..+++++||||+|+++|||++|+.||............ .. ..
T Consensus 180 ~~~~~~----~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~-~~---------~~ 245 (336)
T 3fhr_A 180 ETTQNA----LQTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGFPPFYSNTGQAISPGM-KR---------RI 245 (336)
T ss_dssp EC--------------------------CHHHHHHHHHHHHHHHHHHHHSSCCC--------------------------
T ss_pred eccccc----cccCCCCcCccChhhhCCCCCCchhhHHHHHHHHHHHHHCCCCCCCccchhhhhhH-HH---------hh
Confidence 654221 23456899999999998888999999999999999999999999754322110000 00 00
Q ss_pred cccccCchhhhhHHHHHHHHHHHHHHHhccccCcCCCCCHHHHHHHH
Q 002021 911 DANLLSQEDIHFVAKEQCVSFVFNLAMECTMEFPKQRINAKEIVTKL 957 (979)
Q Consensus 911 ~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~eil~~L 957 (979)
. .............++.++.+++.+|++.||++|||+.|+++|-
T Consensus 246 ~---~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp 289 (336)
T 3fhr_A 246 R---LGQYGFPNPEWSEVSEDAKQLIRLLLKTDPTERLTITQFMNHP 289 (336)
T ss_dssp --------CCCTTTSTTCCHHHHHHHHHHSCSSGGGSCCHHHHHHSH
T ss_pred h---ccccccCchhhccCCHHHHHHHHHHCCCChhHCcCHHHHhcCc
Confidence 0 0000001111234567799999999999999999999999863
No 271
>3o6n_A APL1; leucine-rich repeat, protein binding; HET: NAG; 1.85A {Anopheles gambiae}
Probab=100.00 E-value=2.7e-35 Score=335.30 Aligned_cols=334 Identities=19% Similarity=0.201 Sum_probs=238.4
Q ss_pred CCcCEEEccCCccccccCcccccCCCCcEEeccccccccccCccccccccccceeccccccccccchhhhhhcccCCCCc
Q 002021 249 PNLEILSLWGNNFSGTIPRFIFNASKLSILDLEGNSFSGFIPNTFGNLRNLSWLVLSDNYLTSSTQELSFLSSLSNCKFL 328 (979)
Q Consensus 249 ~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~l~~l~~L 328 (979)
+++++|++++|.++...+..+..+++|++|+|++|.+++..+..|+++++|++|+|++|.++..++. .+.++++|
T Consensus 45 ~~l~~l~l~~~~l~~l~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~-----~~~~l~~L 119 (390)
T 3o6n_A 45 NNQKIVTFKNSTMRKLPAALLDSFRQVELLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPH-----VFQNVPLL 119 (390)
T ss_dssp CCCSEEEEESCEESEECTHHHHHCCCCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCCCCTT-----TTTTCTTC
T ss_pred CCceEEEecCCchhhCChhHhcccccCcEEECCCCcccccChhhccCCCCcCEEECCCCCCCcCCHH-----HhcCCCCC
Confidence 3444444444444433333334444444444444444444444444444444444444444443322 23444444
Q ss_pred cEEEccCCCCcccCCccccccccccccEEEccCccccCCCCccccCCCcccEEEecCCCCCchhHHhhhcCCCCcEEEec
Q 002021 329 KYFDLSYNPLYRILPRTTVGNLSHSLEEFKMSNCNISGGIPEEISNLTNLRTIYLGGNKLNGSILITLSKLQKLQDLGLK 408 (979)
Q Consensus 329 ~~L~Ls~N~l~~~~~~~~~~~l~~~L~~L~L~~n~i~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~ 408 (979)
++|++++|++..+++..+ .. .++|++|++++|.+++..+..+..+++|++|++++|++++. .+..+++|+.|+++
T Consensus 120 ~~L~L~~n~l~~l~~~~~-~~-l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~---~~~~l~~L~~L~l~ 194 (390)
T 3o6n_A 120 TVLVLERNDLSSLPRGIF-HN-TPKLTTLSMSNNNLERIEDDTFQATTSLQNLQLSSNRLTHV---DLSLIPSLFHANVS 194 (390)
T ss_dssp CEEECCSSCCCCCCTTTT-TT-CTTCCEEECCSSCCCBCCTTTTSSCTTCCEEECCSSCCSBC---CGGGCTTCSEEECC
T ss_pred CEEECCCCccCcCCHHHh-cC-CCCCcEEECCCCccCccChhhccCCCCCCEEECCCCcCCcc---ccccccccceeecc
Confidence 455555554444332211 11 23566666666666666777788888899999999988865 35677889999999
Q ss_pred CcccCCCccccccCCCCCceEecCCCcccccCCccccCCCcCceEecCCCccccccccccCcCCCcEEEeccccccCCCc
Q 002021 409 DNKLEGSIPYDICNLAELYRLDLDGNKLSGSIPACFSNLTSLRIVSLGSNELTSIPLTFWNLKDILNLNFSSNFLTGSLP 488 (979)
Q Consensus 409 ~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~lp~~~~~l~~L~~L~ls~N~l~~~~p 488 (979)
+|.+.+ +...++|+.|++++|++... |.. ..++|+.|++++|+++.++ .+..+++|+.|++++|.+++..|
T Consensus 195 ~n~l~~-----~~~~~~L~~L~l~~n~l~~~-~~~--~~~~L~~L~l~~n~l~~~~-~l~~l~~L~~L~Ls~n~l~~~~~ 265 (390)
T 3o6n_A 195 YNLLST-----LAIPIAVEELDASHNSINVV-RGP--VNVELTILKLQHNNLTDTA-WLLNYPGLVEVDLSYNELEKIMY 265 (390)
T ss_dssp SSCCSE-----EECCSSCSEEECCSSCCCEE-ECC--CCSSCCEEECCSSCCCCCG-GGGGCTTCSEEECCSSCCCEEES
T ss_pred cccccc-----cCCCCcceEEECCCCeeeec-ccc--ccccccEEECCCCCCcccH-HHcCCCCccEEECCCCcCCCcCh
Confidence 998874 23456899999999999855 332 3478999999999999874 78889999999999999999889
Q ss_pred cccccccccceEeccCCccCcccchhhcCCcccceeecCCccccCCCCCcccccccccccccccccccccCCccccCccc
Q 002021 489 LEIGSLKVLVGIDLSRNNFSGVIPTEIGGLKNLEYLFLGYNRLQGSIPNSFGDLISLKFLNLSNNNLSGVIPASLEKLSY 568 (979)
Q Consensus 489 ~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~ 568 (979)
..|..+++|+.|+|++|++++ +|..+..+++|++|+|++|+++ .+|..+..+++|++|+|++|+++.. | +..+++
T Consensus 266 ~~~~~l~~L~~L~L~~n~l~~-~~~~~~~l~~L~~L~L~~n~l~-~~~~~~~~l~~L~~L~L~~N~i~~~-~--~~~~~~ 340 (390)
T 3o6n_A 266 HPFVKMQRLERLYISNNRLVA-LNLYGQPIPTLKVLDLSHNHLL-HVERNQPQFDRLENLYLDHNSIVTL-K--LSTHHT 340 (390)
T ss_dssp GGGTTCSSCCEEECCSSCCCE-EECSSSCCTTCCEEECCSSCCC-CCGGGHHHHTTCSEEECCSSCCCCC-C--CCTTCC
T ss_pred hHccccccCCEEECCCCcCcc-cCcccCCCCCCCEEECCCCcce-ecCccccccCcCCEEECCCCcccee-C--chhhcc
Confidence 999999999999999999985 5777788999999999999999 6787899999999999999999855 3 778899
Q ss_pred cCeEeccCCcccccCCCCCCCCCcccccccCCccccCCC
Q 002021 569 LEDLNLSFNQLEGKIPRGGSFGNFSAQSFEGNELLCGSP 607 (979)
Q Consensus 569 L~~L~L~~N~l~~~~p~~~~~~~~~~~~~~~N~~~c~~p 607 (979)
|+.|++++|+++|.... ..+..+....+.+++..|..+
T Consensus 341 L~~L~l~~N~~~~~~~~-~~~~~~~~~~~~~~~~~c~~~ 378 (390)
T 3o6n_A 341 LKNLTLSHNDWDCNSLR-ALFRNVARPAVDDADQHCKID 378 (390)
T ss_dssp CSEEECCSSCEEHHHHH-HHTTTCCTTTBCCCCSCCCTT
T ss_pred CCEEEcCCCCccchhHH-HHHHHHHhhcccccCceeccc
Confidence 99999999999986443 355666677788888888765
No 272
>2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens}
Probab=100.00 E-value=7e-37 Score=337.28 Aligned_cols=245 Identities=24% Similarity=0.330 Sum_probs=192.2
Q ss_pred HHHhhCCCCCCceeeeecceEEEEEEc-CCCcEEEEEEeccccc------cchhcHHHHHHHHHhc----CCCCeeeEEE
Q 002021 677 LCRATDGFSENNLIGRGGFGSVYKASL-GDGMEVAVKVFTSQCG------RAFKSFDVECEIMKSI----RHRNLIKVIS 745 (979)
Q Consensus 677 ~~~~~~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vAvK~~~~~~~------~~~~~~~~E~~~l~~l----~h~niv~l~~ 745 (979)
.....++|+..+.||+|+||.||+|.. .+++.||||++..... .....+.+|+++++++ +||||+++++
T Consensus 26 ~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~h~~i~~~~~ 105 (312)
T 2iwi_A 26 REAFEAEYRLGPLLGKGGFGTVFAGHRLTDRLQVAIKVIPRNRVLGWSPLSDSVTCPLEVALLWKVGAGGGHPGVIRLLD 105 (312)
T ss_dssp -------CEEEEEEEEETTEEEEEEECTTTCCEEEEEECCSTTTC--------CCCCHHHHHHHHHHSSCCCSSBCCEEE
T ss_pred hhhhhhceEEeeEEEcCCCEEEEEEEEccCCeEEEEEEEecccccccccchhhHHHHHHHHHHHhhcccCCCCCeeeEEE
Confidence 344567899999999999999999954 5789999999865432 1234566799999998 8999999999
Q ss_pred eeccCCeeEEEEEe-cCCCccceeeccCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCEEeC-CCCcEEE
Q 002021 746 SCSNEEFKALVLEY-MPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLD-DNMVAHL 823 (979)
Q Consensus 746 ~~~~~~~~~lv~E~-~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~i~H~Dik~~NIll~-~~~~~kl 823 (979)
++.+.+..++|||| +.+++|.+++.... .+++..++.++.|++.||+||| +++|+||||||+||+++ .++.+||
T Consensus 106 ~~~~~~~~~~v~e~~~~~~~L~~~l~~~~-~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dlkp~Nil~~~~~~~~kl 181 (312)
T 2iwi_A 106 WFETQEGFMLVLERPLPAQDLFDYITEKG-PLGEGPSRCFFGQVVAAIQHCH---SRGVVHRDIKDENILIDLRRGCAKL 181 (312)
T ss_dssp EC-----CEEEEECCSSEEEHHHHHHHHC-SCCHHHHHHHHHHHHHHHHHHH---HHTEECCCCSGGGEEEETTTTEEEE
T ss_pred EEecCCeEEEEEEecCCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---HCCeeecCCChhhEEEeCCCCeEEE
Confidence 99999999999999 78999999987643 5899999999999999999999 89999999999999999 8899999
Q ss_pred EeeccccccCCCCCcceecccccCCCCCCccccCCCCCC-CchhHHHHHHHHHHHHcCCCCCcccccCcchHhHhhhhhc
Q 002021 824 SDFSIAKMLTGEDQSMIQTQTLATIGYMAPEYGREGRVS-ANGDVYSFGIMLMETFTGKKPTDEIFNGEMTLKHWVNDWL 902 (979)
Q Consensus 824 ~Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~-~~~DvwslG~il~el~tg~~P~~~~~~~~~~~~~~~~~~~ 902 (979)
+|||++....... .....||..|+|||++.+..+. .++||||+|+++|||++|+.||.... .....
T Consensus 182 ~dfg~~~~~~~~~----~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~-------~~~~~-- 248 (312)
T 2iwi_A 182 IDFGSGALLHDEP----YTDFDGTRVYSPPEWISRHQYHALPATVWSLGILLYDMVCGDIPFERDQ-------EILEA-- 248 (312)
T ss_dssp CCCSSCEECCSSC----BCCCCSCTTTSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSHH-------HHHHT--
T ss_pred EEcchhhhcccCc----ccccCCcccccCceeeecCCCCCccchHHHHHHHHHHHHHCCCCCCChH-------HHhhh--
Confidence 9999998764332 2345689999999988766654 58999999999999999999986421 00000
Q ss_pred CCccchhhcccccCchhhhhHHHHHHHHHHHHHHHhccccCcCCCCCHHHHHHH
Q 002021 903 PISTMEVVDANLLSQEDIHFVAKEQCVSFVFNLAMECTMEFPKQRINAKEIVTK 956 (979)
Q Consensus 903 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~eil~~ 956 (979)
... .+..++..+.+++.+||+.||++|||+.|+++|
T Consensus 249 ----------~~~--------~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~ 284 (312)
T 2iwi_A 249 ----------ELH--------FPAHVSPDCCALIRRCLAPKPSSRPSLEEILLD 284 (312)
T ss_dssp ----------CCC--------CCTTSCHHHHHHHHHHTCSSTTTSCCHHHHHHS
T ss_pred ----------ccC--------CcccCCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 000 012345668899999999999999999999985
No 273
>3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major}
Probab=100.00 E-value=6.6e-36 Score=336.65 Aligned_cols=275 Identities=20% Similarity=0.238 Sum_probs=191.3
Q ss_pred HHHHHhhCCCCCCceeeeecceEEEEEEc-CCCcEEEEEEeccccccchhcHHHHHHHHHhcCCCCeeeEEEeeccCCe-
Q 002021 675 LELCRATDGFSENNLIGRGGFGSVYKASL-GDGMEVAVKVFTSQCGRAFKSFDVECEIMKSIRHRNLIKVISSCSNEEF- 752 (979)
Q Consensus 675 ~~~~~~~~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~- 752 (979)
.......++|+..+.||+|+||.||+|.. .+|+.||||++.... .....+.+|++.++.++||||+++++++...+.
T Consensus 16 ~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~~~l~~l~h~niv~~~~~~~~~~~~ 94 (360)
T 3e3p_A 16 ERSRKEMDRFQVERMAGQGTFGTVQLGKEKSTGMSVAIKKVIQDP-RFRNRELQIMQDLAVLHHPNIVQLQSYFYTLGER 94 (360)
T ss_dssp HHHHHHHTTEEEC----------CEEEEETTTCCEEEEEEEECCT-TCCCHHHHHHHHHHHHCCTTBCCEEEEEEEECSS
T ss_pred hhchhhccceEEEEEEecCCCeEEEEEEECCCCCEEEEEEEecCc-cccHHHHHHHHHHHhcCCCCcccHHHhhhccccc
Confidence 34455678999999999999999999954 578999999986442 334566778888899999999999999855332
Q ss_pred ------eEEEEEecCCCccceeec---cCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCEEeCC-CCcEE
Q 002021 753 ------KALVLEYMPHGSLEKYLY---SSNCILDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDD-NMVAH 822 (979)
Q Consensus 753 ------~~lv~E~~~~g~L~~~l~---~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~i~H~Dik~~NIll~~-~~~~k 822 (979)
.++||||+++ ++.+.+. .....+++..+..++.|++.|++|||. .+++|+||||||+||+++. ++.+|
T Consensus 95 ~~~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~-~~~~ivH~Dlkp~NIll~~~~~~~k 172 (360)
T 3e3p_A 95 DRRDIYLNVVMEYVPD-TLHRCCRNYYRRQVAPPPILIKVFLFQLIRSIGCLHL-PSVNVCHRDIKPHNVLVNEADGTLK 172 (360)
T ss_dssp CTTCEEEEEEEECCSC-BHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHTS-TTTCCBCSCCCGGGEEEETTTTEEE
T ss_pred cccceeEEEEeecccc-cHHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHhC-CCCCeecCcCCHHHEEEeCCCCcEE
Confidence 7899999986 5544433 234568999999999999999999992 3679999999999999996 89999
Q ss_pred EEeeccccccCCCCCcceecccccCCCCCCccccCCC-CCCCchhHHHHHHHHHHHHcCCCCCcccccCcchHhHhhhhh
Q 002021 823 LSDFSIAKMLTGEDQSMIQTQTLATIGYMAPEYGREG-RVSANGDVYSFGIMLMETFTGKKPTDEIFNGEMTLKHWVNDW 901 (979)
Q Consensus 823 l~Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwslG~il~el~tg~~P~~~~~~~~~~~~~~~~~~ 901 (979)
|+|||++........ .....||+.|+|||++.+. .++.++||||+||++|||++|+.||...... ......+...
T Consensus 173 l~Dfg~a~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~~-~~~~~~~~~~ 248 (360)
T 3e3p_A 173 LCDFGSAKKLSPSEP---NVAYICSRYYRAPELIFGNQHYTTAVDIWSVGCIFAEMMLGEPIFRGDNSA-GQLHEIVRVL 248 (360)
T ss_dssp ECCCTTCBCCCTTSC---CCSTTSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHH-HHHHHHHHHH
T ss_pred EeeCCCceecCCCCC---cccccCCcceeCHHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCcCCCChH-HHHHHHHHHc
Confidence 999999987643322 2345689999999988654 4899999999999999999999999763221 1112221111
Q ss_pred cCCc------------cchhhcccccCchhhhhHHHHHHHHHHHHHHHhccccCcCCCCCHHHHHHH
Q 002021 902 LPIS------------TMEVVDANLLSQEDIHFVAKEQCVSFVFNLAMECTMEFPKQRINAKEIVTK 956 (979)
Q Consensus 902 ~~~~------------~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~eil~~ 956 (979)
.... .....+.....-..........++.++.+++.+||+.||.+|||+.|+++|
T Consensus 249 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~h 315 (360)
T 3e3p_A 249 GCPSREVLRKLNPSHTDVDLYNSKGIPWSNVFSDHSLKDAKEAYDLLSALLQYLPEERMKPYEALCH 315 (360)
T ss_dssp CCCCHHHHHHHCTTCCCGGGGCCCCCCHHHHTTTCCCTTHHHHHHHHHHHTCSSGGGSCCHHHHTTS
T ss_pred CCCCHHHHHhcccchhhccccccccCCcccccchhhccccHHHHHHHHHHhccCccccCCHHHHhcC
Confidence 1000 000000000000000001111246789999999999999999999999986
No 274
>1ogq_A PGIP-2, polygalacturonase inhibiting protein; inhibitor; HET: NAG; 1.7A {Phaseolus vulgaris} SCOP: c.10.2.8
Probab=100.00 E-value=6e-36 Score=329.11 Aligned_cols=258 Identities=33% Similarity=0.583 Sum_probs=246.0
Q ss_pred ccccEEEccCccccC--CCCccccCCCcccEEEecC-CCCCchhHHhhhcCCCCcEEEecCcccCCCccccccCCCCCce
Q 002021 352 HSLEEFKMSNCNISG--GIPEEISNLTNLRTIYLGG-NKLNGSILITLSKLQKLQDLGLKDNKLEGSIPYDICNLAELYR 428 (979)
Q Consensus 352 ~~L~~L~L~~n~i~~--~~p~~l~~l~~L~~L~L~~-N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~ 428 (979)
.++++|++++|++++ .+|..++.+++|++|+|++ |.+.+.+|..|.++++|++|++++|.+.+.+|..+.++++|++
T Consensus 50 ~~l~~L~L~~~~l~~~~~~~~~l~~l~~L~~L~L~~~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~ 129 (313)
T 1ogq_A 50 YRVNNLDLSGLNLPKPYPIPSSLANLPYLNFLYIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKTLVT 129 (313)
T ss_dssp CCEEEEEEECCCCSSCEECCGGGGGCTTCSEEEEEEETTEESCCCGGGGGCTTCSEEEEEEECCEEECCGGGGGCTTCCE
T ss_pred ceEEEEECCCCCccCCcccChhHhCCCCCCeeeCCCCCcccccCChhHhcCCCCCEEECcCCeeCCcCCHHHhCCCCCCE
Confidence 468899999999998 8999999999999999995 9999999999999999999999999999999999999999999
Q ss_pred EecCCCcccccCCccccCCCcCceEecCCCccc-cccccccCcC-CCcEEEeccccccCCCccccccccccceEeccCCc
Q 002021 429 LDLDGNKLSGSIPACFSNLTSLRIVSLGSNELT-SIPLTFWNLK-DILNLNFSSNFLTGSLPLEIGSLKVLVGIDLSRNN 506 (979)
Q Consensus 429 L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~-~lp~~~~~l~-~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~ 506 (979)
|+|++|++++.+|..+..+++|++|++++|+++ .+|..+..++ +|+.|++++|++++.+|..+..+. |+.|+|++|+
T Consensus 130 L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~~L~~L~L~~N~l~~~~~~~~~~l~-L~~L~Ls~N~ 208 (313)
T 1ogq_A 130 LDFSYNALSGTLPPSISSLPNLVGITFDGNRISGAIPDSYGSFSKLFTSMTISRNRLTGKIPPTFANLN-LAFVDLSRNM 208 (313)
T ss_dssp EECCSSEEESCCCGGGGGCTTCCEEECCSSCCEEECCGGGGCCCTTCCEEECCSSEEEEECCGGGGGCC-CSEEECCSSE
T ss_pred EeCCCCccCCcCChHHhcCCCCCeEECcCCcccCcCCHHHhhhhhcCcEEECcCCeeeccCChHHhCCc-ccEEECcCCc
Confidence 999999999999999999999999999999999 8999999998 999999999999999999999998 9999999999
Q ss_pred cCcccchhhcCCcccceeecCCccccCCCCCcccccccccccccccccccccCCccccCccccCeEeccCCcccccCCCC
Q 002021 507 FSGVIPTEIGGLKNLEYLFLGYNRLQGSIPNSFGDLISLKFLNLSNNNLSGVIPASLEKLSYLEDLNLSFNQLEGKIPRG 586 (979)
Q Consensus 507 l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~ 586 (979)
+++.+|..|..+++|+.|+|++|++++.+|. +..+++|++|+|++|++++.+|..+..+++|+.|+|++|+++|.+|..
T Consensus 209 l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~-~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~ip~~ 287 (313)
T 1ogq_A 209 LEGDASVLFGSDKNTQKIHLAKNSLAFDLGK-VGLSKNLNGLDLRNNRIYGTLPQGLTQLKFLHSLNVSFNNLCGEIPQG 287 (313)
T ss_dssp EEECCGGGCCTTSCCSEEECCSSEECCBGGG-CCCCTTCCEEECCSSCCEECCCGGGGGCTTCCEEECCSSEEEEECCCS
T ss_pred ccCcCCHHHhcCCCCCEEECCCCceeeecCc-ccccCCCCEEECcCCcccCcCChHHhcCcCCCEEECcCCcccccCCCC
Confidence 9999999999999999999999999977665 888999999999999999999999999999999999999999999999
Q ss_pred CCCCCcccccccCCccccCCCCCCCCCC
Q 002021 587 GSFGNFSAQSFEGNELLCGSPNLQIPPC 614 (979)
Q Consensus 587 ~~~~~~~~~~~~~N~~~c~~p~~~~~~~ 614 (979)
..++++..+.+.+|+++||.| +++|
T Consensus 288 ~~l~~L~~l~l~~N~~lc~~p---~~~C 312 (313)
T 1ogq_A 288 GNLQRFDVSAYANNKCLCGSP---LPAC 312 (313)
T ss_dssp TTGGGSCGGGTCSSSEEESTT---SSCC
T ss_pred ccccccChHHhcCCCCccCCC---CCCC
Confidence 889999999999999999988 5577
No 275
>3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens}
Probab=100.00 E-value=3.2e-36 Score=338.05 Aligned_cols=262 Identities=22% Similarity=0.259 Sum_probs=196.5
Q ss_pred hCCCCCCceeeeecceEEEEEE-cCCCcEEEEEEeccccc--cchhcHHHHHHHHHhcCCCCeeeEEEeeccCCe-----
Q 002021 681 TDGFSENNLIGRGGFGSVYKAS-LGDGMEVAVKVFTSQCG--RAFKSFDVECEIMKSIRHRNLIKVISSCSNEEF----- 752 (979)
Q Consensus 681 ~~~~~~~~~lG~G~~g~Vy~~~-~~~~~~vAvK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~----- 752 (979)
.++|...+.||+|+||.||+|. ..+|+.||||++..... ...+.+.+|+.+++.++||||+++++++...+.
T Consensus 23 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 102 (353)
T 3coi_A 23 PKTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNFY 102 (353)
T ss_dssp ETTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEESSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSGGGCC
T ss_pred CceEEEeeeEecCCCeEEEEEEECCCCCEEEEEEecccccchHHHHHHHHHHHHHHhcCCCCcccHhheEecccccccce
Confidence 3678889999999999999995 45799999999865432 234678899999999999999999999977654
Q ss_pred -eEEEEEecCCCccceeeccCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCEEeCCCCcEEEEeeccccc
Q 002021 753 -KALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFSIAKM 831 (979)
Q Consensus 753 -~~lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~i~H~Dik~~NIll~~~~~~kl~Dfg~~~~ 831 (979)
.++||||++ ++|.+++.. .+++.++..++.|++.||+||| +++|+||||||+||+++.++.+||+|||++..
T Consensus 103 ~~~lv~e~~~-~~l~~~~~~---~~~~~~~~~i~~qi~~al~~LH---~~~ivH~dlkp~NIl~~~~~~~kl~Dfg~~~~ 175 (353)
T 3coi_A 103 DFYLVMPFMQ-TDLQKIMGL---KFSEEKIQYLVYQMLKGLKYIH---SAGVVHRDLKPGNLAVNEDCELKILDFGLARH 175 (353)
T ss_dssp CCEEEEECCS-EEGGGTTTS---CCCHHHHHHHHHHHHHHHHHHH---HTTCCCSSCCGGGEEECTTCCEEECSTTCTTC
T ss_pred eEEEEecccc-CCHHHHhcC---CCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCCHHHEeECCCCcEEEeecccccC
Confidence 499999997 588887754 4899999999999999999999 99999999999999999999999999999986
Q ss_pred cCCCCCcceecccccCCCCCCccccCC-CCCCCchhHHHHHHHHHHHHcCCCCCcccccCcchHhHhhhhhcCCccchhh
Q 002021 832 LTGEDQSMIQTQTLATIGYMAPEYGRE-GRVSANGDVYSFGIMLMETFTGKKPTDEIFNGEMTLKHWVNDWLPISTMEVV 910 (979)
Q Consensus 832 ~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwslG~il~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~ 910 (979)
.... .....+|+.|+|||.+.+ ..++.++||||+||++|||++|+.||......+ ......... .....+..
T Consensus 176 ~~~~-----~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~-~~~~i~~~~-~~~~~~~~ 248 (353)
T 3coi_A 176 ADAE-----MTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLD-QLTQILKVT-GVPGTEFV 248 (353)
T ss_dssp -------------CCSBCCSCHHHHSCCSCCCTTHHHHHHHHHHHHHHHSSCSSBSSCHHH-HHHHHHHHH-CBCCHHHH
T ss_pred CCCC-----ccccccCcCcCCHHHHhCcCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHH-HHHHHHHHh-CCCCHHHH
Confidence 5322 234578999999998876 678999999999999999999999997532111 111111100 00000000
Q ss_pred c-----------ccccCchhhh-hHHHHHHHHHHHHHHHhccccCcCCCCCHHHHHHH
Q 002021 911 D-----------ANLLSQEDIH-FVAKEQCVSFVFNLAMECTMEFPKQRINAKEIVTK 956 (979)
Q Consensus 911 ~-----------~~~~~~~~~~-~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~eil~~ 956 (979)
. .......... ......+++++.+++.+|++.||++|||+.|+++|
T Consensus 249 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~Rpt~~e~l~h 306 (353)
T 3coi_A 249 QKLNDKAAKSYIQSLPQTPRKDFTQLFPRASPQAADLLEKMLELDVDKRLTAAQALTH 306 (353)
T ss_dssp TTCSCHHHHHHHHTSCBCSSCCTTTTCTTSCHHHHHHHHHHSCSCTTTSCCHHHHHTS
T ss_pred HHHhhHHHHHHHHhCcCCCCccHHHhcCCcCHHHHHHHHHHcCCCcccCCCHHHHhcC
Confidence 0 0000000000 00112456779999999999999999999999986
No 276
>4fcg_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, LRR, N- and C-terminal helices; 2.00A {Xanthomonas campestris PV}
Probab=100.00 E-value=8.3e-36 Score=329.93 Aligned_cols=273 Identities=22% Similarity=0.296 Sum_probs=240.3
Q ss_pred CCChhHHHHHHHHHHhcccCCCCcccccc----CCCCCCCccceeEee--------CCCCcEEEEEecCCCccccCCCCC
Q 002021 25 SSTITDQDALLALKAHITHDPTNFLAKNW----NTSTPVCNWTGVACE--------VHSQRVTVLNISSLNLTGTIPSQL 92 (979)
Q Consensus 25 ~~~~~~~~all~~k~~~~~~~~~~~~~~w----~~~~~~c~w~gv~c~--------~~~~~v~~l~l~~~~l~g~~~~~l 92 (979)
.+..+|++||++||+++..||.+.+ .+| ..+.++|.|.|++|. ....+|+.|+|++|+++ .+|+.+
T Consensus 23 ~~~~~~~~aLl~~k~~~~~~~~~~~-~~w~~~~~~~~~~~~~~g~~~~~~~~~l~~~~~~~l~~L~L~~n~l~-~lp~~l 100 (328)
T 4fcg_A 23 TALRPYHDVLSQWQRHYNADRNRWH-SAWRQANSNNPQIETRTGRALKATADLLEDATQPGRVALELRSVPLP-QFPDQA 100 (328)
T ss_dssp CCCCCHHHHHHHHHHHHHHCCTTHH-HHHHHHTTTCTTSCCSHHHHHHHHHHHHHHHTSTTCCEEEEESSCCS-SCCSCG
T ss_pred ccCchHHHHHHHHHHhccCCchhhh-hhhcccccccccccccCCcchhhhHHHHhcccccceeEEEccCCCch-hcChhh
Confidence 3456899999999999988888776 589 567789999999995 24578999999999999 889999
Q ss_pred cCCCCCCeeeccCCcccccCCccccccCcccEEecccccccccCCccccCCCCCcEEEccCCccCchhhhhhhccCCccc
Q 002021 93 GNLSSLQSLNLSFNRLFGSIPSAIFTTYTLKYVCLRGNQLSGTFPSFISNKSSLQHLDLSSNALSGEIRANICREIPREF 172 (979)
Q Consensus 93 ~~l~~L~~L~L~~n~~~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~~ip~~l 172 (979)
+++++|++|+|++|+++ .+|..++.+++|++|+|++|+++ .+|..++++++|++|+|++|++.+. +|..+
T Consensus 101 ~~l~~L~~L~L~~n~l~-~lp~~~~~l~~L~~L~Ls~n~l~-~lp~~l~~l~~L~~L~L~~n~~~~~--------~p~~~ 170 (328)
T 4fcg_A 101 FRLSHLQHMTIDAAGLM-ELPDTMQQFAGLETLTLARNPLR-ALPASIASLNRLRELSIRACPELTE--------LPEPL 170 (328)
T ss_dssp GGGTTCSEEEEESSCCC-CCCSCGGGGTTCSEEEEESCCCC-CCCGGGGGCTTCCEEEEEEETTCCC--------CCSCS
T ss_pred hhCCCCCEEECCCCCcc-chhHHHhccCCCCEEECCCCccc-cCcHHHhcCcCCCEEECCCCCCccc--------cChhH
Confidence 99999999999999999 99999999999999999999999 8899999999999999999988765 56655
Q ss_pred C---------CCCccceeecccccccccccccccCCCCCCceecCCCeeeecCCccccccCccceeeccCCCCcCCCccc
Q 002021 173 G---------NLPELELMSLAANNLQGKIPLKIGNLRNLEKLDIGDNKLVGIAPIAIFNVSTLKILGLQDNSLSGCLSSI 243 (979)
Q Consensus 173 ~---------~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~ 243 (979)
+ ++++|++|+|++|+++ .+|..++++++|++|+|++|+++++ |..+.++++|+.|+|++|.+.+..+.
T Consensus 171 ~~~~~~~~~~~l~~L~~L~L~~n~l~-~lp~~l~~l~~L~~L~L~~N~l~~l-~~~l~~l~~L~~L~Ls~n~~~~~~p~- 247 (328)
T 4fcg_A 171 ASTDASGEHQGLVNLQSLRLEWTGIR-SLPASIANLQNLKSLKIRNSPLSAL-GPAIHHLPKLEELDLRGCTALRNYPP- 247 (328)
T ss_dssp EEEC-CCCEEESTTCCEEEEEEECCC-CCCGGGGGCTTCCEEEEESSCCCCC-CGGGGGCTTCCEEECTTCTTCCBCCC-
T ss_pred hhccchhhhccCCCCCEEECcCCCcC-cchHhhcCCCCCCEEEccCCCCCcC-chhhccCCCCCEEECcCCcchhhhHH-
Confidence 4 4999999999999998 7888899999999999999999976 55788999999999999988876654
Q ss_pred ccCCCCCcCEEEccCCccccccCcccccCCCCcEEeccccccccccCccccccccccceeccccccccc
Q 002021 244 GYARLPNLEILSLWGNNFSGTIPRFIFNASKLSILDLEGNSFSGFIPNTFGNLRNLSWLVLSDNYLTSS 312 (979)
Q Consensus 244 ~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~ 312 (979)
.+..+++|++|+|++|++.+.+|..+.++++|++|+|++|.+.+.+|..++++++|+.+++..|.+...
T Consensus 248 ~~~~l~~L~~L~L~~n~~~~~~p~~~~~l~~L~~L~L~~n~~~~~iP~~l~~L~~L~~l~l~~~~~~~l 316 (328)
T 4fcg_A 248 IFGGRAPLKRLILKDCSNLLTLPLDIHRLTQLEKLDLRGCVNLSRLPSLIAQLPANCIILVPPHLQAQL 316 (328)
T ss_dssp CTTCCCCCCEEECTTCTTCCBCCTTGGGCTTCCEEECTTCTTCCCCCGGGGGSCTTCEEECCGGGSCC-
T ss_pred HhcCCCCCCEEECCCCCchhhcchhhhcCCCCCEEeCCCCCchhhccHHHhhccCceEEeCCHHHHHHH
Confidence 477889999999999998889998899999999999999999989999999999999999888766543
No 277
>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens}
Probab=100.00 E-value=2.1e-36 Score=347.14 Aligned_cols=250 Identities=22% Similarity=0.369 Sum_probs=189.5
Q ss_pred CCCCCCceeeeecceEEEEEEcCCCcEEEEEEeccccccchhcHHHHHHHHHhc-CCCCeeeEEEeeccCCeeEEEEEec
Q 002021 682 DGFSENNLIGRGGFGSVYKASLGDGMEVAVKVFTSQCGRAFKSFDVECEIMKSI-RHRNLIKVISSCSNEEFKALVLEYM 760 (979)
Q Consensus 682 ~~~~~~~~lG~G~~g~Vy~~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lv~E~~ 760 (979)
.+|+..+.||+|+||+||.....+++.||||++.... ...+.+|+++++.+ +|||||++++++.+....++||||+
T Consensus 24 ~~y~~~~~LG~G~~G~V~~~~~~~~~~vAvK~~~~~~---~~~~~~E~~~l~~l~~HpnIv~l~~~~~~~~~~~lv~E~~ 100 (432)
T 3p23_A 24 ISFCPKDVLGHGAEGTIVYRGMFDNRDVAVKRILPEC---FSFADREVQLLRESDEHPNVIRYFCTEKDRQFQYIAIELC 100 (432)
T ss_dssp EEEEEEEEEEECGGGCEEEEEESSSSEEEEEEECTTT---EEECHHHHHHHHHSCCCTTBCCEEEEEEETTEEEEEEECC
T ss_pred EEEecCCeeecCcCEEEEEEEEeCCeEEEEEEECHHH---HHHHHHHHHHHHhccCCCCcCeEEEEEecCCEEEEEEECC
Confidence 4578889999999999665555589999999986432 34567899999999 7999999999999999999999999
Q ss_pred CCCccceeeccCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCEEeCC-----CCcEEEEeeccccccCCC
Q 002021 761 PHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDD-----NMVAHLSDFSIAKMLTGE 835 (979)
Q Consensus 761 ~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~i~H~Dik~~NIll~~-----~~~~kl~Dfg~~~~~~~~ 835 (979)
+ |+|.+++........+.+++.++.||++||+||| +++|+||||||+||+++. ...+||+|||+++.....
T Consensus 101 ~-g~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH---~~~ivHrDlKp~NIll~~~~~~~~~~~kL~DFG~a~~~~~~ 176 (432)
T 3p23_A 101 A-ATLQEYVEQKDFAHLGLEPITLLQQTTSGLAHLH---SLNIVHRDLKPHNILISMPNAHGKIKAMISDFGLCKKLAVG 176 (432)
T ss_dssp S-EEHHHHHHSSSCCCCSSCHHHHHHHHHHHHHHHH---HTTCCCCCCSTTSEEECCCBTTTBCCEEECCTTEEECC---
T ss_pred C-CCHHHHHHhcCCCccchhHHHHHHHHHHHHHHHH---HCcCEeCCCCHHHEEEecCCCCCceeEEEecccceeeccCC
Confidence 6 5999999877655666677899999999999999 999999999999999953 336889999999876433
Q ss_pred CC-cceecccccCCCCCCccccC---CCCCCCchhHHHHHHHHHHHHc-CCCCCcccccCcchHhHhhhhhcCCccchhh
Q 002021 836 DQ-SMIQTQTLATIGYMAPEYGR---EGRVSANGDVYSFGIMLMETFT-GKKPTDEIFNGEMTLKHWVNDWLPISTMEVV 910 (979)
Q Consensus 836 ~~-~~~~~~~~gt~~y~aPE~~~---~~~~~~~~DvwslG~il~el~t-g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~ 910 (979)
.. ........||+.|+|||++. ...++.++||||+||++|||++ |..||........ .. ..........
T Consensus 177 ~~~~~~~~~~~gt~~y~APE~l~~~~~~~~t~~~DiwSlG~il~ellt~g~~pf~~~~~~~~--~~----~~~~~~~~~~ 250 (432)
T 3p23_A 177 RHSFSRRSGVPGTEGWIAPEMLSEDCKENPTYTVDIFSAGCVFYYVISEGSHPFGKSLQRQA--NI----LLGACSLDCL 250 (432)
T ss_dssp ---------CCSCTTSCCGGGTSCC---CCCTHHHHHHHHHHHHHHHTTSCBTTBSTTTHHH--HH----HTTCCCCTTS
T ss_pred CcceeeccccCCCcCccChhhhhcccccCCCcHHHHHHHHHHHHHHHcCCCCCcchhhHHHH--HH----HhccCCcccc
Confidence 21 12234567999999999987 4567889999999999999999 9999864321111 10 0000000000
Q ss_pred cccccCchhhhhHHHHHHHHHHHHHHHhccccCcCCCCCHHHHHHH
Q 002021 911 DANLLSQEDIHFVAKEQCVSFVFNLAMECTMEFPKQRINAKEIVTK 956 (979)
Q Consensus 911 ~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~eil~~ 956 (979)
......+..+.+++.+||+.||++|||+.|+++|
T Consensus 251 ------------~~~~~~~~~~~~li~~~L~~dP~~Rps~~evl~h 284 (432)
T 3p23_A 251 ------------HPEKHEDVIARELIEKMIAMDPQKRPSAKHVLKH 284 (432)
T ss_dssp ------------CTTCHHHHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred ------------CccccccHHHHHHHHHHHhCCHhhCCCHHHHHhC
Confidence 0112334568899999999999999999999964
No 278
>3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A*
Probab=100.00 E-value=2.2e-36 Score=335.67 Aligned_cols=254 Identities=25% Similarity=0.300 Sum_probs=178.4
Q ss_pred hCCCCCCceeeeecceEEEEEEc-CCCcEEEEEEeccccc-cchhcHHHHHH-HHHhcCCCCeeeEEEeeccCCeeEEEE
Q 002021 681 TDGFSENNLIGRGGFGSVYKASL-GDGMEVAVKVFTSQCG-RAFKSFDVECE-IMKSIRHRNLIKVISSCSNEEFKALVL 757 (979)
Q Consensus 681 ~~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vAvK~~~~~~~-~~~~~~~~E~~-~l~~l~h~niv~l~~~~~~~~~~~lv~ 757 (979)
.++|+..+.||+|+||.||+|.. .+|+.||||++..... .....+..|+. +++.++||||+++++++.+++..++||
T Consensus 21 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~~~~h~niv~~~~~~~~~~~~~lv~ 100 (327)
T 3aln_A 21 AEDLKDLGEIGRGAYGSVNKMVHKPSGQIMAVKRIRSTVDEKEQKQLLMDLDVVMRSSDCPYIVQFYGALFREGDCWICM 100 (327)
T ss_dssp SCSEEC-CEEEECSSEEEEEEEETTTTEEEEEEEEECCCCHHHHHHHHHHHHHHHSSCCCTTBCCEEEEEECSSEEEEEE
T ss_pred HHHhhehheeccCCCEEEEEEEEcCCCCEEEEEEeecccCchHHHHHHHHHHHHHHcCCCCcEeeeeeEEEeCCceEEEE
Confidence 36788899999999999999955 5799999999975432 23344555655 677789999999999999999999999
Q ss_pred EecCCCccceeecc----CCCCCCHHHHHHHHHHHHHHHHHHhcCCCC-CeEecCCCCCCEEeCCCCcEEEEeecccccc
Q 002021 758 EYMPHGSLEKYLYS----SNCILDIFQRLNIMIDVASALEYLHFGYSA-PVIHCDLKPSNVLLDDNMVAHLSDFSIAKML 832 (979)
Q Consensus 758 E~~~~g~L~~~l~~----~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~-~i~H~Dik~~NIll~~~~~~kl~Dfg~~~~~ 832 (979)
||+++ +|.+++.. ....+++..+..++.|++.|++||| +. +|+||||||+||+++.++.+||+|||++...
T Consensus 101 e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH---~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~~~~~ 176 (327)
T 3aln_A 101 ELMST-SFDKFYKYVYSVLDDVIPEEILGKITLATVKALNHLK---ENLKIIHRDIKPSNILLDRSGNIKLCDFGISGQL 176 (327)
T ss_dssp CCCSE-EHHHHHHHHHHTTCCCCCHHHHHHHHHHHHHHHHHHH---HHHSCCCSCCCGGGEEEETTTEEEECCCSSSCC-
T ss_pred eecCC-ChHHHHHHHHhhhcccCcHHHHHHHHHHHHHHHHHHh---ccCCEeECCCCHHHEEEcCCCCEEEccCCCceec
Confidence 99975 77777652 2456899999999999999999999 77 9999999999999999999999999999876
Q ss_pred CCCCCcceecccccCCCCCCcccc----CCCCCCCchhHHHHHHHHHHHHcCCCCCcccccCcchHhHhhhhhcCCccch
Q 002021 833 TGEDQSMIQTQTLATIGYMAPEYG----REGRVSANGDVYSFGIMLMETFTGKKPTDEIFNGEMTLKHWVNDWLPISTME 908 (979)
Q Consensus 833 ~~~~~~~~~~~~~gt~~y~aPE~~----~~~~~~~~~DvwslG~il~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~ 908 (979)
.... ......||+.|+|||++ .+..++.++||||||+++|||++|+.||............. .....
T Consensus 177 ~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~----~~~~~-- 247 (327)
T 3aln_A 177 VDSI---AKTRDAGCRPYMAPERIDPSASRQGYDVRSDVWSLGITLYELATGRFPYPKWNSVFDQLTQV----VKGDP-- 247 (327)
T ss_dssp --------------------------------CCSHHHHHHHHHHHHHHHHSCCCSSCC-------CCC----CCSCC--
T ss_pred cccc---ccccCCCCccccCceeeccccCcCCCCchhhHHHHHHHHHHHHHCCCCCCCcchHHHHHHHH----hcCCC--
Confidence 4322 12334689999999998 45678999999999999999999999997532211111100 00000
Q ss_pred hhcccccCchhhhhHHHHHHHHHHHHHHHhccccCcCCCCCHHHHHHH
Q 002021 909 VVDANLLSQEDIHFVAKEQCVSFVFNLAMECTMEFPKQRINAKEIVTK 956 (979)
Q Consensus 909 ~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~eil~~ 956 (979)
+.. .......++..+.+++.+||+.||++|||+.|++++
T Consensus 248 ---~~~------~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~h 286 (327)
T 3aln_A 248 ---PQL------SNSEEREFSPSFINFVNLCLTKDESKRPKYKELLKH 286 (327)
T ss_dssp ---CCC------CCCSSCCCCHHHHHHHHHHTCSSGGGSCCHHHHTTS
T ss_pred ---CCC------CCcccccCCHHHHHHHHHHhhCChhhCcCHHHHHhC
Confidence 000 000112345679999999999999999999999875
No 279
>2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A*
Probab=100.00 E-value=3.2e-36 Score=341.59 Aligned_cols=201 Identities=24% Similarity=0.326 Sum_probs=171.0
Q ss_pred HhhCCCCCCceeeeecceEEEEEE-cCCCcEEEEEEeccccccchhcHHHHHHHHHhcC-CC-----CeeeEEEeeccCC
Q 002021 679 RATDGFSENNLIGRGGFGSVYKAS-LGDGMEVAVKVFTSQCGRAFKSFDVECEIMKSIR-HR-----NLIKVISSCSNEE 751 (979)
Q Consensus 679 ~~~~~~~~~~~lG~G~~g~Vy~~~-~~~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~-h~-----niv~l~~~~~~~~ 751 (979)
...++|+..+.||+|+||.||+|. ..+++.||||++... ....+.+..|+++++.++ |+ +++++++++...+
T Consensus 51 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~-~~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~~ 129 (382)
T 2vx3_A 51 KWMDRYEIDSLIGKGSFGQVVKAYDRVEQEWVAIKIIKNK-KAFLNQAQIEVRLLELMNKHDTEMKYYIVHLKRHFMFRN 129 (382)
T ss_dssp EETTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECSS-HHHHHHHHHHHHHHHHHHHCSSGGGGGBCCEEEEEEETT
T ss_pred EeeeeEEEEEEEeecCCEEEEEEEEcCCCcEEEEEEEecc-HHHHHHHHHHHHHHHHHHhcccccceeEEEeeeeeccCC
Confidence 345789999999999999999995 457899999998643 233456778999988885 44 4999999999999
Q ss_pred eeEEEEEecCCCccceeeccCC-CCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCEEeC--CCCcEEEEeecc
Q 002021 752 FKALVLEYMPHGSLEKYLYSSN-CILDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLD--DNMVAHLSDFSI 828 (979)
Q Consensus 752 ~~~lv~E~~~~g~L~~~l~~~~-~~l~~~~~~~i~~~ia~~L~~LH~~~~~~i~H~Dik~~NIll~--~~~~~kl~Dfg~ 828 (979)
..++||||++ |+|.+++.... ..+++..++.++.|++.||+|||. .+.+|+||||||+||+++ .++.+||+|||+
T Consensus 130 ~~~lv~e~~~-~~L~~~l~~~~~~~~~~~~~~~i~~qi~~al~~lH~-~~~~ivHrDlkp~NIll~~~~~~~~kL~DFG~ 207 (382)
T 2vx3_A 130 HLCLVFEMLS-YNLYDLLRNTNFRGVSLNLTRKFAQQMCTALLFLAT-PELSIIHCDLKPENILLCNPKRSAIKIVDFGS 207 (382)
T ss_dssp EEEEEEECCC-CBHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHTS-TTTCEECCCCSGGGEEESSTTSCCEEECCCTT
T ss_pred ceEEEEecCC-CCHHHHHhhcCcCCCCHHHHHHHHHHHHHHHHHhcc-CCCCEEcCCCCcccEEEecCCCCcEEEEeccC
Confidence 9999999996 49999987653 468999999999999999999992 146899999999999995 578899999999
Q ss_pred ccccCCCCCcceecccccCCCCCCccccCCCCCCCchhHHHHHHHHHHHHcCCCCCccc
Q 002021 829 AKMLTGEDQSMIQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFTGKKPTDEI 887 (979)
Q Consensus 829 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~tg~~P~~~~ 887 (979)
++..... .....||+.|+|||++.+..++.++||||+||++|||+||+.||...
T Consensus 208 a~~~~~~-----~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~ 261 (382)
T 2vx3_A 208 SCQLGQR-----IYQYIQSRFYRSPEVLLGMPYDLAIDMWSLGCILVEMHTGEPLFSGA 261 (382)
T ss_dssp CEETTCC-----CCSSCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCS
T ss_pred ceecccc-----cccccCCccccChHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCC
Confidence 9876322 23457899999999999989999999999999999999999999753
No 280
>3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ...
Probab=100.00 E-value=6.1e-37 Score=338.75 Aligned_cols=244 Identities=23% Similarity=0.303 Sum_probs=200.5
Q ss_pred HHhhCCCCCCceeeeecceEEEEEE-cCCCcEEEEEEecccccc------chhcHHHHHHHHHhcC--CCCeeeEEEeec
Q 002021 678 CRATDGFSENNLIGRGGFGSVYKAS-LGDGMEVAVKVFTSQCGR------AFKSFDVECEIMKSIR--HRNLIKVISSCS 748 (979)
Q Consensus 678 ~~~~~~~~~~~~lG~G~~g~Vy~~~-~~~~~~vAvK~~~~~~~~------~~~~~~~E~~~l~~l~--h~niv~l~~~~~ 748 (979)
....++|+..+.||+|+||.||+|. ..+++.||||++...... ..+.+.+|++++++++ ||||+++++++.
T Consensus 39 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~i~~~~~~~~ 118 (320)
T 3a99_A 39 EPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFE 118 (320)
T ss_dssp -CCTTTEEEEEECSSSSSCEEEEEEETTTTEEEEEEEEEGGGCCCEEECTTCCEEEHHHHHHHHHCSSSCSBCCEEEEEE
T ss_pred CCccCceEEEEEEeeCCCeEEEEEEECCCCcEEEEEEEecccchhhhhhhhhhHHHHHHHHHHhhccCCCCceEEEEEEe
Confidence 3445789999999999999999995 567899999998754321 2356778999999996 599999999999
Q ss_pred cCCeeEEEEEecCC-CccceeeccCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCEEeC-CCCcEEEEee
Q 002021 749 NEEFKALVLEYMPH-GSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLD-DNMVAHLSDF 826 (979)
Q Consensus 749 ~~~~~~lv~E~~~~-g~L~~~l~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~i~H~Dik~~NIll~-~~~~~kl~Df 826 (979)
+++..++||||+.+ ++|.+++... ..+++..++.++.|++.||+||| +++|+||||||+||+++ +++.+||+||
T Consensus 119 ~~~~~~lv~e~~~~~~~L~~~l~~~-~~l~~~~~~~i~~qi~~~L~~LH---~~~ivH~Dlkp~NIll~~~~~~~kL~Df 194 (320)
T 3a99_A 119 RPDSFVLILERPEPVQDLFDFITER-GALQEELARSFFWQVLEAVRHCH---NCGVLHRDIKDENILIDLNRGELKLIDF 194 (320)
T ss_dssp CSSEEEEEEECCSSEEEHHHHHHHH-CSCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEEETTTTEEEECCC
T ss_pred cCCcEEEEEEcCCCCccHHHHHhcc-CCCCHHHHHHHHHHHHHHHHHHH---HCCcEeCCCCHHHEEEeCCCCCEEEeeC
Confidence 99999999999976 8999998764 36899999999999999999999 99999999999999999 7899999999
Q ss_pred ccccccCCCCCcceecccccCCCCCCccccCCCCC-CCchhHHHHHHHHHHHHcCCCCCcccccCcchHhHhhhhhcCCc
Q 002021 827 SIAKMLTGEDQSMIQTQTLATIGYMAPEYGREGRV-SANGDVYSFGIMLMETFTGKKPTDEIFNGEMTLKHWVNDWLPIS 905 (979)
Q Consensus 827 g~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~~DvwslG~il~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~ 905 (979)
|++....... .....||+.|+|||++.+..+ ++++||||||+++|||++|+.||.... ......
T Consensus 195 g~~~~~~~~~----~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~-------~~~~~~---- 259 (320)
T 3a99_A 195 GSGALLKDTV----YTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDE-------EIIRGQ---- 259 (320)
T ss_dssp TTCEECCSSC----BCCCCSCGGGSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSHH-------HHHHCC----
T ss_pred cccccccccc----ccCCCCCccCCChHHhccCCCCCccchHHhHHHHHHHHHHCCCCCCChh-------hhhccc----
Confidence 9998764322 234568999999999876665 678999999999999999999986421 000000
Q ss_pred cchhhcccccCchhhhhHHHHHHHHHHHHHHHhccccCcCCCCCHHHHHHH
Q 002021 906 TMEVVDANLLSQEDIHFVAKEQCVSFVFNLAMECTMEFPKQRINAKEIVTK 956 (979)
Q Consensus 906 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~eil~~ 956 (979)
.. .+..++.++.+++.+||+.||++|||+.|++++
T Consensus 260 --------~~--------~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~h 294 (320)
T 3a99_A 260 --------VF--------FRQRVSSECQHLIRWCLALRPSDRPTFEEIQNH 294 (320)
T ss_dssp --------CC--------CSSCCCHHHHHHHHHHTCSSGGGSCCHHHHHTS
T ss_pred --------cc--------ccccCCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 00 011244668999999999999999999999875
No 281
>2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A*
Probab=100.00 E-value=4.5e-36 Score=345.56 Aligned_cols=250 Identities=23% Similarity=0.348 Sum_probs=186.6
Q ss_pred CCCCceeeeecceEEEEEEcCCCcEEEEEEeccccccchhcHHHHHHHHHhc-CCCCeeeEEEeeccCCeeEEEEEecCC
Q 002021 684 FSENNLIGRGGFGSVYKASLGDGMEVAVKVFTSQCGRAFKSFDVECEIMKSI-RHRNLIKVISSCSNEEFKALVLEYMPH 762 (979)
Q Consensus 684 ~~~~~~lG~G~~g~Vy~~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lv~E~~~~ 762 (979)
|...+.||+|+||+||.+...+|+.||||++... ..+.+.+|+++++++ +||||+++++++.+++..++||||++
T Consensus 17 ~~~~~~LG~G~~g~V~~~~~~~g~~vAvK~~~~~---~~~~~~~E~~~l~~l~~HpnIv~~~~~~~~~~~~~lv~E~~~- 92 (434)
T 2rio_A 17 VVSEKILGYGSSGTVVFQGSFQGRPVAVKRMLID---FCDIALMEIKLLTESDDHPNVIRYYCSETTDRFLYIALELCN- 92 (434)
T ss_dssp EEEEEEEEECSTTCEEEEEESSSSEEEEEEEEGG---GHHHHHHHHHHHHHHTTSTTBCCEEEEEECSSEEEEEECCCS-
T ss_pred eeccCeEeeCCCeEEEEEEEECCeEEEEEEEcHH---HHHHHHHHHHHHHhccCCCCcCeEEEEEecCCeEEEEEecCC-
Confidence 3446789999999998776668999999998643 235578899999886 89999999999999999999999996
Q ss_pred CccceeeccCCCC------CCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCEEeCCC-------------CcEEE
Q 002021 763 GSLEKYLYSSNCI------LDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDN-------------MVAHL 823 (979)
Q Consensus 763 g~L~~~l~~~~~~------l~~~~~~~i~~~ia~~L~~LH~~~~~~i~H~Dik~~NIll~~~-------------~~~kl 823 (979)
|+|.+++...... .++..++.++.||+.||+||| +++|+||||||+||+++.+ +.+||
T Consensus 93 gsL~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH---~~~ivHrDLkp~NILl~~~~~~~~~~~~~~~~~~~kL 169 (434)
T 2rio_A 93 LNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLH---SLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILI 169 (434)
T ss_dssp EEHHHHHHTC------------CCHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEEECCHHHHSCCTTCCCSCEEEE
T ss_pred CCHHHHHhccCCCchhhhhccchhHHHHHHHHHHHHHHHH---HCCccccCCChHhEEEecCcccccccccCCCceEEEE
Confidence 6999998765321 123346789999999999999 9999999999999999754 48999
Q ss_pred EeeccccccCCCCCcc--eecccccCCCCCCccccCC-------CCCCCchhHHHHHHHHHHHHc-CCCCCcccccCcch
Q 002021 824 SDFSIAKMLTGEDQSM--IQTQTLATIGYMAPEYGRE-------GRVSANGDVYSFGIMLMETFT-GKKPTDEIFNGEMT 893 (979)
Q Consensus 824 ~Dfg~~~~~~~~~~~~--~~~~~~gt~~y~aPE~~~~-------~~~~~~~DvwslG~il~el~t-g~~P~~~~~~~~~~ 893 (979)
+|||+++......... ......||+.|+|||++.+ ..++.++||||+||++|||+| |+.||........
T Consensus 170 ~DFG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~DiwSlG~il~ellt~g~~Pf~~~~~~~~- 248 (434)
T 2rio_A 170 SDFGLCKKLDSGQSSFRTNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKHPFGDKYSRES- 248 (434)
T ss_dssp CCCTTCEECCC--------------CCTTSCHHHHSCCCTTSCCCCCCTHHHHHHHHHHHHHHHTTSCCTTCSTTTHHH-
T ss_pred cccccceecCCCCccceeeecCCCCCCCccCHHHhccccccccccCcchhhhhHhHHHHHHHHHhCCCCCCCCchhhHH-
Confidence 9999998765432211 1234579999999999865 568999999999999999999 9999975332211
Q ss_pred HhHhhhhhcCCccchhhcccccCchhhhhHHHHHHHHHHHHHHHhccccCcCCCCCHHHHHHH
Q 002021 894 LKHWVNDWLPISTMEVVDANLLSQEDIHFVAKEQCVSFVFNLAMECTMEFPKQRINAKEIVTK 956 (979)
Q Consensus 894 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~eil~~ 956 (979)
........... ........++.++.+++.+||+.||++|||+.|+++|
T Consensus 249 --~i~~~~~~~~~-------------~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~eil~h 296 (434)
T 2rio_A 249 --NIIRGIFSLDE-------------MKCLHDRSLIAEATDLISQMIDHDPLKRPTAMKVLRH 296 (434)
T ss_dssp --HHHHTCCCCCC-------------CTTCCCHHHHHHHHHHHHHHTCSSGGGSCCHHHHHTS
T ss_pred --HHhcCCCCccc-------------ccccccccchHHHHHHHHHHhhCChhhCCCHHHHHhC
Confidence 11111111000 0011123456779999999999999999999999874
No 282
>2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase; 1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A 3nr9_A*
Probab=100.00 E-value=8.7e-36 Score=334.96 Aligned_cols=264 Identities=21% Similarity=0.261 Sum_probs=199.2
Q ss_pred hCCCCCCceeeeecceEEEEEEc-CCC-cEEEEEEeccccccchhcHHHHHHHHHhcCCCC------eeeEEEeeccCCe
Q 002021 681 TDGFSENNLIGRGGFGSVYKASL-GDG-MEVAVKVFTSQCGRAFKSFDVECEIMKSIRHRN------LIKVISSCSNEEF 752 (979)
Q Consensus 681 ~~~~~~~~~lG~G~~g~Vy~~~~-~~~-~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~h~n------iv~l~~~~~~~~~ 752 (979)
.++|+..+.||+|+||.||+|.. .++ +.||||++... ....+.+.+|+++++.++|++ ++.+++++...+.
T Consensus 18 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~-~~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~ 96 (355)
T 2eu9_A 18 QERYEIVGNLGEGTFGKVVECLDHARGKSQVALKIIRNV-GKYREAARLEINVLKKIKEKDKENKFLCVLMSDWFNFHGH 96 (355)
T ss_dssp TTTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEECSC-HHHHHHHHHHHHHHHHHHHHCTTSCSCBCCEEEEEEETTE
T ss_pred cccEEEEEEeeccCCeEEEEEEecCCCceEEEEEEEccc-ccchhHHHHHHHHHHHHhhcCCCCceeEEEeeeeeeeCCe
Confidence 36789999999999999999954 344 78999998643 234567888999999997766 9999999999999
Q ss_pred eEEEEEecCCCccceeeccC-CCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCEEe----------------
Q 002021 753 KALVLEYMPHGSLEKYLYSS-NCILDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLL---------------- 815 (979)
Q Consensus 753 ~~lv~E~~~~g~L~~~l~~~-~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~i~H~Dik~~NIll---------------- 815 (979)
.++||||+ ++++.+++... ...+++.+++.++.||+.||+||| +++|+||||||+||++
T Consensus 97 ~~lv~e~~-~~~l~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH---~~~ivH~Dlkp~NIll~~~~~~~~~~~~~~~~ 172 (355)
T 2eu9_A 97 MCIAFELL-GKNTFEFLKENNFQPYPLPHVRHMAYQLCHALRFLH---ENQLTHTDLKPENILFVNSEFETLYNEHKSCE 172 (355)
T ss_dssp EEEEEECC-CCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHH---TTTEECCCCCGGGEEESCCCEEEEECCC-CCC
T ss_pred EEEEEecc-CCChHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCCHHHEEEeccccccccccccccc
Confidence 99999999 55676666554 356899999999999999999999 9999999999999999
Q ss_pred ---CCCCcEEEEeeccccccCCCCCcceecccccCCCCCCccccCCCCCCCchhHHHHHHHHHHHHcCCCCCcccccCcc
Q 002021 816 ---DDNMVAHLSDFSIAKMLTGEDQSMIQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFTGKKPTDEIFNGEM 892 (979)
Q Consensus 816 ---~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~tg~~P~~~~~~~~~ 892 (979)
+.++.+||+|||++...... .....||+.|+|||++.+..++.++||||+||++|||++|+.||......+
T Consensus 173 ~~~~~~~~~kl~Dfg~~~~~~~~-----~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~- 246 (355)
T 2eu9_A 173 EKSVKNTSIRVADFGSATFDHEH-----HTTIVATRHYRPPEVILELGWAQPCDVWSIGCILFEYYRGFTLFQTHENRE- 246 (355)
T ss_dssp EEEESCCCEEECCCTTCEETTSC-----CCSSCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHH-
T ss_pred ccccCCCcEEEeecCcccccccc-----ccCCcCCCcccCCeeeecCCCCCccchHHHHHHHHHHHhCCCCCCCCCHHH-
Confidence 56789999999999864322 134578999999999999899999999999999999999999997532211
Q ss_pred hHhHhhhhhcCCccchhhc----------cc---------------ccCchhhhhHHHHHHHHHHHHHHHhccccCcCCC
Q 002021 893 TLKHWVNDWLPISTMEVVD----------AN---------------LLSQEDIHFVAKEQCVSFVFNLAMECTMEFPKQR 947 (979)
Q Consensus 893 ~~~~~~~~~~~~~~~~~~~----------~~---------------~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~R 947 (979)
..........+.. ..... .. ...............+.++.+++.+||+.||++|
T Consensus 247 ~~~~~~~~~~~~p-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~R 325 (355)
T 2eu9_A 247 HLVMMEKILGPIP-SHMIHRTRKQKYFYKGGLVWDENSSDGRYVKENCKPLKSYMLQDSLEHVQLFDLMRRMLEFDPAQR 325 (355)
T ss_dssp HHHHHHHHHCCCC-HHHHHHCSCGGGEETTEECCCTTSHHHHHHHHHCCCGGGGCSCCSHHHHHHHHHHHHHTCSSTTTS
T ss_pred HHHHHHHHcCCCc-HHHhhhccchhhhcccccccccccchhccccccCCcccccccccchhHHHHHHHHHHHhcCChhhC
Confidence 1111111000000 00000 00 0000000001112345679999999999999999
Q ss_pred CCHHHHHHH
Q 002021 948 INAKEIVTK 956 (979)
Q Consensus 948 ps~~eil~~ 956 (979)
||+.|+++|
T Consensus 326 pt~~e~l~h 334 (355)
T 2eu9_A 326 ITLAEALLH 334 (355)
T ss_dssp CCHHHHTTS
T ss_pred cCHHHHhcC
Confidence 999999875
No 283
>3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=100.00 E-value=6e-35 Score=350.86 Aligned_cols=334 Identities=19% Similarity=0.198 Sum_probs=243.7
Q ss_pred CCcCEEEccCCccccccCcccccCCCCcEEeccccccccccCccccccccccceeccccccccccchhhhhhcccCCCCc
Q 002021 249 PNLEILSLWGNNFSGTIPRFIFNASKLSILDLEGNSFSGFIPNTFGNLRNLSWLVLSDNYLTSSTQELSFLSSLSNCKFL 328 (979)
Q Consensus 249 ~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~l~~l~~L 328 (979)
++++.|++++|.++...+..+.++++|++|+|++|.+++..|..|+.+++|++|+|++|.++..++. .+.++++|
T Consensus 51 ~~l~~l~l~~~~l~~lp~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~-----~~~~l~~L 125 (597)
T 3oja_B 51 NNQKIVTFKNSTMRKLPAALLDSFRQVELLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPH-----VFQNVPLL 125 (597)
T ss_dssp CCCSEEEESSCEESEECTHHHHHCCCCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCCCCTT-----TTTTCTTC
T ss_pred CCceEEEeeCCCCCCcCHHHHccCCCCcEEECCCCCCCCCChHHhcCCCCCCEEECCCCcCCCCCHH-----HHcCCCCC
Confidence 3444444444444433333344444444444444444444444444444444444444444444332 23444445
Q ss_pred cEEEccCCCCcccCCccccccccccccEEEccCccccCCCCccccCCCcccEEEecCCCCCchhHHhhhcCCCCcEEEec
Q 002021 329 KYFDLSYNPLYRILPRTTVGNLSHSLEEFKMSNCNISGGIPEEISNLTNLRTIYLGGNKLNGSILITLSKLQKLQDLGLK 408 (979)
Q Consensus 329 ~~L~Ls~N~l~~~~~~~~~~~l~~~L~~L~L~~n~i~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~ 408 (979)
++|+|++|.+..+++..+ .. .++|++|+|++|.+++..|..|+.+++|++|+|++|.+++.. +..+++|+.|+++
T Consensus 126 ~~L~L~~n~l~~l~~~~~-~~-l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~---~~~l~~L~~L~l~ 200 (597)
T 3oja_B 126 TVLVLERNDLSSLPRGIF-HN-TPKLTTLSMSNNNLERIEDDTFQATTSLQNLQLSSNRLTHVD---LSLIPSLFHANVS 200 (597)
T ss_dssp CEEECCSSCCCCCCTTTT-TT-CTTCCEEECCSSCCCBCCTTTTTTCTTCCEEECTTSCCSBCC---GGGCTTCSEEECC
T ss_pred CEEEeeCCCCCCCCHHHh-cc-CCCCCEEEeeCCcCCCCChhhhhcCCcCcEEECcCCCCCCcC---hhhhhhhhhhhcc
Confidence 555555555444433221 11 245666666666677777778888999999999999988753 5667889999999
Q ss_pred CcccCCCccccccCCCCCceEecCCCcccccCCccccCCCcCceEecCCCccccccccccCcCCCcEEEeccccccCCCc
Q 002021 409 DNKLEGSIPYDICNLAELYRLDLDGNKLSGSIPACFSNLTSLRIVSLGSNELTSIPLTFWNLKDILNLNFSSNFLTGSLP 488 (979)
Q Consensus 409 ~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~lp~~~~~l~~L~~L~ls~N~l~~~~p 488 (979)
+|.+.+ +....+|+.|++++|.+....+.. .++|+.|+|++|.++.. ..+..+++|+.|+|++|.+++..|
T Consensus 201 ~n~l~~-----l~~~~~L~~L~ls~n~l~~~~~~~---~~~L~~L~L~~n~l~~~-~~l~~l~~L~~L~Ls~N~l~~~~~ 271 (597)
T 3oja_B 201 YNLLST-----LAIPIAVEELDASHNSINVVRGPV---NVELTILKLQHNNLTDT-AWLLNYPGLVEVDLSYNELEKIMY 271 (597)
T ss_dssp SSCCSE-----EECCTTCSEEECCSSCCCEEECSC---CSCCCEEECCSSCCCCC-GGGGGCTTCSEEECCSSCCCEEES
T ss_pred cCcccc-----ccCCchhheeeccCCccccccccc---CCCCCEEECCCCCCCCC-hhhccCCCCCEEECCCCccCCCCH
Confidence 998874 334568999999999998554333 36899999999999985 578899999999999999999999
Q ss_pred cccccccccceEeccCCccCcccchhhcCCcccceeecCCccccCCCCCcccccccccccccccccccccCCccccCccc
Q 002021 489 LEIGSLKVLVGIDLSRNNFSGVIPTEIGGLKNLEYLFLGYNRLQGSIPNSFGDLISLKFLNLSNNNLSGVIPASLEKLSY 568 (979)
Q Consensus 489 ~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~ 568 (979)
..|+.+++|+.|+|++|++++ +|..+..+++|+.|+|++|.++ .+|..+..+++|+.|+|++|+|++. | +..+++
T Consensus 272 ~~~~~l~~L~~L~Ls~N~l~~-l~~~~~~l~~L~~L~Ls~N~l~-~i~~~~~~l~~L~~L~L~~N~l~~~-~--~~~~~~ 346 (597)
T 3oja_B 272 HPFVKMQRLERLYISNNRLVA-LNLYGQPIPTLKVLDLSHNHLL-HVERNQPQFDRLENLYLDHNSIVTL-K--LSTHHT 346 (597)
T ss_dssp GGGTTCSSCCEEECTTSCCCE-EECSSSCCTTCCEEECCSSCCC-CCGGGHHHHTTCSEEECCSSCCCCC-C--CCTTCC
T ss_pred HHhcCccCCCEEECCCCCCCC-CCcccccCCCCcEEECCCCCCC-ccCcccccCCCCCEEECCCCCCCCc-C--hhhcCC
Confidence 999999999999999999996 5778888999999999999999 6888899999999999999999865 3 778899
Q ss_pred cCeEeccCCcccccCCCCCCCCCcccccccCCccccCCC
Q 002021 569 LEDLNLSFNQLEGKIPRGGSFGNFSAQSFEGNELLCGSP 607 (979)
Q Consensus 569 L~~L~L~~N~l~~~~p~~~~~~~~~~~~~~~N~~~c~~p 607 (979)
|+.|+|++|+|+|..+. ..+..+....+.+++..|+.+
T Consensus 347 L~~L~l~~N~~~~~~~~-~~~~~~~~~~~~~~~~~C~~~ 384 (597)
T 3oja_B 347 LKNLTLSHNDWDCNSLR-ALFRNVARPAVDDADQHCKID 384 (597)
T ss_dssp CSEEECCSSCEEHHHHH-HHTTTCCTTTBCCCCCCCCTT
T ss_pred CCEEEeeCCCCCChhHH-HHHHHHhhhccccccccCCcc
Confidence 99999999999997643 456777778889999999875
No 284
>1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A
Probab=100.00 E-value=3.3e-36 Score=340.89 Aligned_cols=265 Identities=15% Similarity=0.236 Sum_probs=198.6
Q ss_pred CCCCCCceeeeecceEEEEEE-cCCCcEEEEEEeccccccchhcHHHHHHHHHhcC-----------CCCeeeEEEeecc
Q 002021 682 DGFSENNLIGRGGFGSVYKAS-LGDGMEVAVKVFTSQCGRAFKSFDVECEIMKSIR-----------HRNLIKVISSCSN 749 (979)
Q Consensus 682 ~~~~~~~~lG~G~~g~Vy~~~-~~~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~-----------h~niv~l~~~~~~ 749 (979)
++|+..+.||+|+||.||+|. ..+++.||||++... ....+.+.+|++++++++ ||||+++++++..
T Consensus 19 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~-~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~i~~~~~~~~~ 97 (373)
T 1q8y_A 19 ARYILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGD-KVYTEAAEDEIKLLQRVNDADNTKEDSMGANHILKLLDHFNH 97 (373)
T ss_dssp TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSC-HHHHHHHHHHHHHHHHHHHTCCSHHHHHHHTTBCCCCEEEEE
T ss_pred CeEEEEEeeeecCCeEEEEEEecCCCcEEEEEEecCC-ccchhhhhHHHHHHHHhhcccccchhccccchHHHHHHHhhc
Confidence 678899999999999999995 467999999998643 223466788999999886 8999999999875
Q ss_pred CC----eeEEEEEecCCCccceeeccC-CCCCCHHHHHHHHHHHHHHHHHHhcCCCC-CeEecCCCCCCEEeC------C
Q 002021 750 EE----FKALVLEYMPHGSLEKYLYSS-NCILDIFQRLNIMIDVASALEYLHFGYSA-PVIHCDLKPSNVLLD------D 817 (979)
Q Consensus 750 ~~----~~~lv~E~~~~g~L~~~l~~~-~~~l~~~~~~~i~~~ia~~L~~LH~~~~~-~i~H~Dik~~NIll~------~ 817 (979)
.+ ..++||||+ +++|.+++... ...+++..++.++.||+.||+||| ++ +|+||||||+||+++ .
T Consensus 98 ~~~~~~~~~lv~e~~-~~~L~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~lH---~~~~ivH~Dikp~NIll~~~~~~~~ 173 (373)
T 1q8y_A 98 KGPNGVHVVMVFEVL-GENLLALIKKYEHRGIPLIYVKQISKQLLLGLDYMH---RRCGIIHTDIKPENVLMEIVDSPEN 173 (373)
T ss_dssp EETTEEEEEEEECCC-CEEHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHH---HTTCEECSCCSGGGEEEEEEETTTT
T ss_pred cCCCCceEEEEEecC-CCCHHHHHHHhhccCCcHHHHHHHHHHHHHHHHHHH---hcCCEEecCCChHHeEEeccCCCcC
Confidence 44 789999999 88999998764 345899999999999999999999 87 999999999999994 4
Q ss_pred CCcEEEEeeccccccCCCCCcceecccccCCCCCCccccCCCCCCCchhHHHHHHHHHHHHcCCCCCcccccCcc-----
Q 002021 818 NMVAHLSDFSIAKMLTGEDQSMIQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFTGKKPTDEIFNGEM----- 892 (979)
Q Consensus 818 ~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~tg~~P~~~~~~~~~----- 892 (979)
.+.+||+|||++...... .....||+.|+|||++.+..++.++||||+||++|||++|+.||........
T Consensus 174 ~~~~kl~Dfg~a~~~~~~-----~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~ 248 (373)
T 1q8y_A 174 LIQIKIADLGNACWYDEH-----YTNSIQTREYRSPEVLLGAPWGCGADIWSTACLIFELITGDFLFEPDEGHSYTKDDD 248 (373)
T ss_dssp EEEEEECCCTTCEETTBC-----CCSCCSCGGGCCHHHHHTCCCCTHHHHHHHHHHHHHHHHSSCCC---------CHHH
T ss_pred cceEEEcccccccccCCC-----CCCCCCCccccCcHHHhCCCCCchHhHHHHHHHHHHHHhCCCCCCCCcccccCChHH
Confidence 458999999999876422 2345789999999999988999999999999999999999999975432111
Q ss_pred hHhHhhhhhcCCc------------------cchhh-ccccc---CchhhhhHHHHHHHHHHHHHHHhccccCcCCCCCH
Q 002021 893 TLKHWVNDWLPIS------------------TMEVV-DANLL---SQEDIHFVAKEQCVSFVFNLAMECTMEFPKQRINA 950 (979)
Q Consensus 893 ~~~~~~~~~~~~~------------------~~~~~-~~~~~---~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~ 950 (979)
............. ..... ..... .........+..++.++.+++.+||+.||++|||+
T Consensus 249 ~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~ 328 (373)
T 1q8y_A 249 HIAQIIELLGELPSYLLRNGKYTRTFFNSRGLLRNISKLKFWPLEDVLTEKYKFSKDEAKEISDFLSPMLQLDPRKRADA 328 (373)
T ss_dssp HHHHHHHHHCSCCHHHHHHCTTHHHHBCC--CBSSCCCCCBCCHHHHHHHTTCCCHHHHHHHHHHHGGGGCSSTTTCBCH
T ss_pred HHHHHHHhcCCCCHHHHhccchhhhhcCCcchhcccccccccchhhhhhhcccCCcchHHHHHHHHHHHhccCccccCCH
Confidence 1111111000000 00000 00000 00000111224567889999999999999999999
Q ss_pred HHHHHH
Q 002021 951 KEIVTK 956 (979)
Q Consensus 951 ~eil~~ 956 (979)
.|+++|
T Consensus 329 ~ell~h 334 (373)
T 1q8y_A 329 GGLVNH 334 (373)
T ss_dssp HHHHTC
T ss_pred HHHhhC
Confidence 999886
No 285
>2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens}
Probab=100.00 E-value=4.5e-36 Score=331.78 Aligned_cols=252 Identities=21% Similarity=0.277 Sum_probs=181.4
Q ss_pred hCCCCCCceeeeecceEEEEEEc-CCCcEEEEEEecccccc--chhcHHHHHHHHHhcCCCCeeeEEEeeccCCeeEEEE
Q 002021 681 TDGFSENNLIGRGGFGSVYKASL-GDGMEVAVKVFTSQCGR--AFKSFDVECEIMKSIRHRNLIKVISSCSNEEFKALVL 757 (979)
Q Consensus 681 ~~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vAvK~~~~~~~~--~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 757 (979)
.++|+..+.||+|+||.||+|.. .+|+.||||++...... ..+.+.++..+++.++||||+++++++.+++..++||
T Consensus 24 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~h~~i~~~~~~~~~~~~~~lv~ 103 (318)
T 2dyl_A 24 INDLENLGEMGSGTCGQVWKMRFRKTGHVIAVKQMRRSGNKEENKRILMDLDVVLKSHDCPYIVQCFGTFITNTDVFIAM 103 (318)
T ss_dssp GGGEEEEEEC------CEEEEEETTTCCEEEEEEEETTSCHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEE
T ss_pred hccccccceeeecCCeeEEEEEEecCCeEEEEEEecccccchHHHHHHHHHHHHHHhcCCCceeeEEEEEecCCcEEEEE
Confidence 35688889999999999999965 57999999998754322 2233445556788889999999999999999999999
Q ss_pred EecCCCccceeeccCCCCCCHHHHHHHHHHHHHHHHHHhcCCCC-CeEecCCCCCCEEeCCCCcEEEEeeccccccCCCC
Q 002021 758 EYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGYSA-PVIHCDLKPSNVLLDDNMVAHLSDFSIAKMLTGED 836 (979)
Q Consensus 758 E~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~-~i~H~Dik~~NIll~~~~~~kl~Dfg~~~~~~~~~ 836 (979)
||+ ++.+..+.......+++..++.++.|+++||+||| ++ +|+||||||+||+++.++.+||+|||++.......
T Consensus 104 e~~-~~~~~~l~~~~~~~~~~~~~~~~~~~i~~~l~~lH---~~~~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~~ 179 (318)
T 2dyl_A 104 ELM-GTCAEKLKKRMQGPIPERILGKMTVAIVKALYYLK---EKHGVIHRDVKPSNILLDERGQIKLCDFGISGRLVDDK 179 (318)
T ss_dssp CCC-SEEHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHH---HHHCCCCCCCCGGGEEECTTSCEEECCCTTC-------
T ss_pred ecc-CCcHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHH---hhCCEEeCCCCHHHEEECCCCCEEEEECCCchhccCCc
Confidence 999 44555555444557899999999999999999999 74 99999999999999999999999999997654322
Q ss_pred CcceecccccCCCCCCccccC-----CCCCCCchhHHHHHHHHHHHHcCCCCCcccccCcchHhHhhhhhcCCccchhhc
Q 002021 837 QSMIQTQTLATIGYMAPEYGR-----EGRVSANGDVYSFGIMLMETFTGKKPTDEIFNGEMTLKHWVNDWLPISTMEVVD 911 (979)
Q Consensus 837 ~~~~~~~~~gt~~y~aPE~~~-----~~~~~~~~DvwslG~il~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 911 (979)
......+|+.|+|||.+. ...++.++||||+|+++|||++|+.||..................+.
T Consensus 180 ---~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~------- 249 (318)
T 2dyl_A 180 ---AKDRSAGCAAYMAPERIDPPDPTKPDYDIRADVWSLGISLVELATGQFPYKNCKTDFEVLTKVLQEEPPL------- 249 (318)
T ss_dssp ----------CCTTCCHHHHC--------CCTHHHHHHHHHHHHHHHHSSCTTTTCCSHHHHHHHHHHSCCCC-------
T ss_pred ---cccccCCCccccChhhcccccccccCCccccchhhHHHHHHHHHhCCCCCCCCCccHHHHHHHhccCCCC-------
Confidence 123456899999999984 45688999999999999999999999975322211111111111000
Q ss_pred ccccCchhhhhHHHHHHHHHHHHHHHhccccCcCCCCCHHHHHHH
Q 002021 912 ANLLSQEDIHFVAKEQCVSFVFNLAMECTMEFPKQRINAKEIVTK 956 (979)
Q Consensus 912 ~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~eil~~ 956 (979)
.+....++.++.+++.+||+.||.+||++.|+++|
T Consensus 250 ----------~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~h 284 (318)
T 2dyl_A 250 ----------LPGHMGFSGDFQSFVKDCLTKDHRKRPKYNKLLEH 284 (318)
T ss_dssp ----------CCSSSCCCHHHHHHHHHHTCSCTTTSCCHHHHTTS
T ss_pred ----------CCccCCCCHHHHHHHHHHccCChhHCcCHHHHhhC
Confidence 00111345668999999999999999999999886
No 286
>4fmz_A Internalin; leucine rich repeat, structural genomic center for structural genomics, JCSG, protein structure INI PSI-biology; HET: MSE; 1.91A {Listeria monocytogenes serotype 4B}
Probab=100.00 E-value=4.5e-34 Score=319.88 Aligned_cols=307 Identities=24% Similarity=0.365 Sum_probs=201.6
Q ss_pred ccccCccceeeccCCCCcCCCcccccCCCCCcCEEEccCCccccccCcccccCCCCcEEeccccccccccCccccccccc
Q 002021 220 IFNVSTLKILGLQDNSLSGCLSSIGYARLPNLEILSLWGNNFSGTIPRFIFNASKLSILDLEGNSFSGFIPNTFGNLRNL 299 (979)
Q Consensus 220 l~~l~~L~~L~L~~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L 299 (979)
+..+++|+.|++++|.+.... .+..+++|++|++++|++++..+ +..+++|++|++++|.+++. +.|.++++|
T Consensus 40 ~~~l~~L~~L~l~~~~i~~~~---~~~~~~~L~~L~l~~n~i~~~~~--~~~l~~L~~L~L~~n~i~~~--~~~~~l~~L 112 (347)
T 4fmz_A 40 QEELESITKLVVAGEKVASIQ---GIEYLTNLEYLNLNGNQITDISP--LSNLVKLTNLYIGTNKITDI--SALQNLTNL 112 (347)
T ss_dssp HHHHTTCSEEECCSSCCCCCT---TGGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCCC--GGGTTCTTC
T ss_pred chhcccccEEEEeCCccccch---hhhhcCCccEEEccCCccccchh--hhcCCcCCEEEccCCcccCc--hHHcCCCcC
Confidence 456677777777777776543 25567777777777777764332 66677777777777777653 246666777
Q ss_pred cceeccccccccccchhhhhhcccCCCCccEEEccCCCCcccCCccccccccccccEEEccCccccCCCCccccCCCccc
Q 002021 300 SWLVLSDNYLTSSTQELSFLSSLSNCKFLKYFDLSYNPLYRILPRTTVGNLSHSLEEFKMSNCNISGGIPEEISNLTNLR 379 (979)
Q Consensus 300 ~~L~Ls~N~l~~~~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~~L~~L~L~~n~i~~~~p~~l~~l~~L~ 379 (979)
++|++++|.++..+. +..+++|++|++++|.... .+ ..+..+++|+
T Consensus 113 ~~L~l~~n~i~~~~~-------~~~l~~L~~L~l~~n~~~~--------------------------~~-~~~~~l~~L~ 158 (347)
T 4fmz_A 113 RELYLNEDNISDISP-------LANLTKMYSLNLGANHNLS--------------------------DL-SPLSNMTGLN 158 (347)
T ss_dssp SEEECTTSCCCCCGG-------GTTCTTCCEEECTTCTTCC--------------------------CC-GGGTTCTTCC
T ss_pred CEEECcCCcccCchh-------hccCCceeEEECCCCCCcc--------------------------cc-cchhhCCCCc
Confidence 777777776665432 4555666666666654322 22 2256666666
Q ss_pred EEEecCCCCCchhHHhhhcCCCCcEEEecCcccCCCccccccCCCCCceEecCCCcccccCCccccCCCcCceEecCCCc
Q 002021 380 TIYLGGNKLNGSILITLSKLQKLQDLGLKDNKLEGSIPYDICNLAELYRLDLDGNKLSGSIPACFSNLTSLRIVSLGSNE 459 (979)
Q Consensus 380 ~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~ 459 (979)
+|++++|.+.+..+ +..+++|+.|++++|.+.+..+ +..+++|+.|++++|.+.+..+ +..+++|++|++++|+
T Consensus 159 ~L~l~~~~~~~~~~--~~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~~~--~~~~~~L~~L~l~~n~ 232 (347)
T 4fmz_A 159 YLTVTESKVKDVTP--IANLTDLYSLSLNYNQIEDISP--LASLTSLHYFTAYVNQITDITP--VANMTRLNSLKIGNNK 232 (347)
T ss_dssp EEECCSSCCCCCGG--GGGCTTCSEEECTTSCCCCCGG--GGGCTTCCEEECCSSCCCCCGG--GGGCTTCCEEECCSSC
T ss_pred EEEecCCCcCCchh--hccCCCCCEEEccCCccccccc--ccCCCccceeecccCCCCCCch--hhcCCcCCEEEccCCc
Confidence 66666666665444 6666667777777776664332 6666777777777777765433 6667777777777777
Q ss_pred cccccccccCcCCCcEEEeccccccCCCccccccccccceEeccCCccCcccchhhcCCcccceeecCCccccCCCCCcc
Q 002021 460 LTSIPLTFWNLKDILNLNFSSNFLTGSLPLEIGSLKVLVGIDLSRNNFSGVIPTEIGGLKNLEYLFLGYNRLQGSIPNSF 539 (979)
Q Consensus 460 l~~lp~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~ 539 (979)
++.++. +..+++|+.|++++|.+++. ..+..+++|+.|++++|++++. ..+..+++|+.|++++|++++..|..+
T Consensus 233 l~~~~~-~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~L~~n~l~~~~~~~l 307 (347)
T 4fmz_A 233 ITDLSP-LANLSQLTWLEIGTNQISDI--NAVKDLTKLKMLNVGSNQISDI--SVLNNLSQLNSLFLNNNQLGNEDMEVI 307 (347)
T ss_dssp CCCCGG-GTTCTTCCEEECCSSCCCCC--GGGTTCTTCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCGGGHHHH
T ss_pred cCCCcc-hhcCCCCCEEECCCCccCCC--hhHhcCCCcCEEEccCCccCCC--hhhcCCCCCCEEECcCCcCCCcChhHh
Confidence 776665 66677777777777777653 3566777777777777777754 346777777777777777777677777
Q ss_pred cccccccccccccccccccCCccccCccccCeEeccCCccc
Q 002021 540 GDLISLKFLNLSNNNLSGVIPASLEKLSYLEDLNLSFNQLE 580 (979)
Q Consensus 540 ~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~ 580 (979)
..+++|++|+|++|++++..| +..+++|+.|++++|+++
T Consensus 308 ~~l~~L~~L~L~~n~l~~~~~--~~~l~~L~~L~l~~N~i~ 346 (347)
T 4fmz_A 308 GGLTNLTTLFLSQNHITDIRP--LASLSKMDSADFANQVIK 346 (347)
T ss_dssp HTCTTCSEEECCSSSCCCCGG--GGGCTTCSEESSSCC---
T ss_pred hccccCCEEEccCCccccccC--hhhhhccceeehhhhccc
Confidence 777777777777777776555 677777777777777764
No 287
>3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A*
Probab=100.00 E-value=1.2e-35 Score=350.09 Aligned_cols=272 Identities=25% Similarity=0.340 Sum_probs=202.3
Q ss_pred hCCCCCCceeeeecceEEEEEEc-CCCcEEEEEEecccc-ccchhcHHHHHHHHHhcCCCCeeeEEEeecc------CCe
Q 002021 681 TDGFSENNLIGRGGFGSVYKASL-GDGMEVAVKVFTSQC-GRAFKSFDVECEIMKSIRHRNLIKVISSCSN------EEF 752 (979)
Q Consensus 681 ~~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vAvK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~------~~~ 752 (979)
.++|+..+.||+|+||.||+|.. .+|+.||||++.... ....+.+.+|++++++++||||+++++++.. .+.
T Consensus 13 ~grY~i~~~LG~G~fG~Vyla~~~~tg~~VAVKvi~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~v~~~~~~~~~~~~ 92 (676)
T 3qa8_A 13 CGPWEMKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVVSAREVPDGLQKLAPNDL 92 (676)
T ss_dssp ----CCCCCCCBCSSSBCCCCCCTTTTCCEEECCCCSCCCHHHHHHHHHHHHHHHHCCBTTBCCEEECCTTTCCCCTTSS
T ss_pred CCCeEEEEEEeeCCCeEEEEEEECCCCcEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCCCCceeeeecccccccCCCe
Confidence 36899999999999999999954 578999999987542 2345678899999999999999999999765 677
Q ss_pred eEEEEEecCCCccceeeccCC--CCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCEEeCCCCc---EEEEeec
Q 002021 753 KALVLEYMPHGSLEKYLYSSN--CILDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMV---AHLSDFS 827 (979)
Q Consensus 753 ~~lv~E~~~~g~L~~~l~~~~--~~l~~~~~~~i~~~ia~~L~~LH~~~~~~i~H~Dik~~NIll~~~~~---~kl~Dfg 827 (979)
.++||||+++|+|.+++.... ..+++..++.++.|++.|++||| +++|+||||||+||+++.++. +||+|||
T Consensus 93 ~~LVmEy~~ggsL~~~L~~~~~~~~lse~~i~~I~~QLl~aL~yLH---s~gIVHrDLKP~NILl~~~g~~~~vKL~DFG 169 (676)
T 3qa8_A 93 PLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSALRYLH---ENRIIHRDLKPENIVLQPGPQRLIHKIIDLG 169 (676)
T ss_dssp CCCEEECCSSCBHHHHHHSSSCTTCCCSSHHHHHHHHHHHHHHHHH---HTTBCCCCCCSTTEEEECCSSSCEEEECSCC
T ss_pred EEEEEEeCCCCCHHHHHHhcccCCCCCHHHHHHHHHHHHHHHHHHH---HCCCccCCCCHHHeEeecCCCceeEEEcccc
Confidence 899999999999999987643 35889999999999999999999 899999999999999997664 9999999
Q ss_pred cccccCCCCCcceecccccCCCCCCccccCCCCCCCchhHHHHHHHHHHHHcCCCCCcccccCcchHhHhhhhhcCCccc
Q 002021 828 IAKMLTGEDQSMIQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFTGKKPTDEIFNGEMTLKHWVNDWLPISTM 907 (979)
Q Consensus 828 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~ 907 (979)
.+....... ......||+.|+|||.+.+..++.++||||+|+++|||++|+.||.... ....|..........
T Consensus 170 ~a~~~~~~~---~~~~~~gt~~Y~APE~l~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~----~~~~~~~~i~~~~~~ 242 (676)
T 3qa8_A 170 YAKELDQGE---LCTEFVGTLQYLAPELLEQKKYTVTVDYWSFGTLAFECITGFRPFLPNW----QPVQWHGKVREKSNE 242 (676)
T ss_dssp CCCBTTSCC---CCCCCCSCCTTCSSCSSCCSCCSTTHHHHHHHHHHHHHHSSCSSCCSSC----HHHHSSTTCC-----
T ss_pred ccccccccc---ccccccCCcccCChHHhccCCCCchhHHHHHHHHHHHHHHCCCCCCccc----chhhhhhhhhcccch
Confidence 998764332 2244678999999999999999999999999999999999999986521 111221111111000
Q ss_pred hh-----hcccc-c-CchhhhhHHHHHHHHHHHHHHHhccccCcCCCCCHHH-----HHHHHHHhHH
Q 002021 908 EV-----VDANL-L-SQEDIHFVAKEQCVSFVFNLAMECTMEFPKQRINAKE-----IVTKLLKIRD 962 (979)
Q Consensus 908 ~~-----~~~~~-~-~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~e-----il~~L~~~~~ 962 (979)
.. ..... . .............+..+.+++.+|+..||++|||+.| +.+.+.++.+
T Consensus 243 ~~~~~~~l~g~~~~~~~lp~p~~l~~~ls~~L~dLI~~mL~~DP~kRPTa~elL~hp~F~~l~~iL~ 309 (676)
T 3qa8_A 243 HIVVYDDLTGAVKFSSVLPTPNHLSGILAGKLERWLQCMLMWHQRQRGTDPQNPNVGCFQALDSILS 309 (676)
T ss_dssp -CCSCCCCSSSCCCCSSSCCSCCCCGGGHHHHHHHHHHHSCSSCC---CCTTCCCCTTHHHHHHHHC
T ss_pred hhhhhhhhccccccccccCCchhhchhhhHHHHHHHHHHccCCHhhCcCHHHHhcCHHHHHHHHHHh
Confidence 00 00000 0 0000000112346678999999999999999999988 5556665554
No 288
>4fmz_A Internalin; leucine rich repeat, structural genomic center for structural genomics, JCSG, protein structure INI PSI-biology; HET: MSE; 1.91A {Listeria monocytogenes serotype 4B}
Probab=100.00 E-value=1.5e-33 Score=315.63 Aligned_cols=305 Identities=26% Similarity=0.376 Sum_probs=186.3
Q ss_pred CCCCCCceecCCCeeeecCCccccccCccceeeccCCCCcCCCcccccCCCCCcCEEEccCCccccccCcccccCCCCcE
Q 002021 198 NLRNLEKLDIGDNKLVGIAPIAIFNVSTLKILGLQDNSLSGCLSSIGYARLPNLEILSLWGNNFSGTIPRFIFNASKLSI 277 (979)
Q Consensus 198 ~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~ 277 (979)
.+++|++|++++|++..+. .+..+++|+.|++++|++++..+ +..+++|++|++++|.+++ +| .+..+++|++
T Consensus 42 ~l~~L~~L~l~~~~i~~~~--~~~~~~~L~~L~l~~n~i~~~~~---~~~l~~L~~L~L~~n~i~~-~~-~~~~l~~L~~ 114 (347)
T 4fmz_A 42 ELESITKLVVAGEKVASIQ--GIEYLTNLEYLNLNGNQITDISP---LSNLVKLTNLYIGTNKITD-IS-ALQNLTNLRE 114 (347)
T ss_dssp HHTTCSEEECCSSCCCCCT--TGGGCTTCCEEECCSSCCCCCGG---GTTCTTCCEEECCSSCCCC-CG-GGTTCTTCSE
T ss_pred hcccccEEEEeCCccccch--hhhhcCCccEEEccCCccccchh---hhcCCcCCEEEccCCcccC-ch-HHcCCCcCCE
Confidence 3444555555555554431 24445555555555555544332 4455555555555555553 22 3555666666
Q ss_pred EeccccccccccCccccccccccceeccccccccccchhhhhhcccCCCCccEEEccCCCCcccCCccccccccccccEE
Q 002021 278 LDLEGNSFSGFIPNTFGNLRNLSWLVLSDNYLTSSTQELSFLSSLSNCKFLKYFDLSYNPLYRILPRTTVGNLSHSLEEF 357 (979)
Q Consensus 278 L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~~L~~L 357 (979)
|++++|.+++..+ +..+++|++|++++|....... .+..+++|++|++++|.+..+.+
T Consensus 115 L~l~~n~i~~~~~--~~~l~~L~~L~l~~n~~~~~~~------~~~~l~~L~~L~l~~~~~~~~~~-------------- 172 (347)
T 4fmz_A 115 LYLNEDNISDISP--LANLTKMYSLNLGANHNLSDLS------PLSNMTGLNYLTVTESKVKDVTP-------------- 172 (347)
T ss_dssp EECTTSCCCCCGG--GTTCTTCCEEECTTCTTCCCCG------GGTTCTTCCEEECCSSCCCCCGG--------------
T ss_pred EECcCCcccCchh--hccCCceeEEECCCCCCccccc------chhhCCCCcEEEecCCCcCCchh--------------
Confidence 6666666654432 5566666666666664332211 24455555665555555443211
Q ss_pred EccCccccCCCCccccCCCcccEEEecCCCCCchhHHhhhcCCCCcEEEecCcccCCCccccccCCCCCceEecCCCccc
Q 002021 358 KMSNCNISGGIPEEISNLTNLRTIYLGGNKLNGSILITLSKLQKLQDLGLKDNKLEGSIPYDICNLAELYRLDLDGNKLS 437 (979)
Q Consensus 358 ~L~~n~i~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~ 437 (979)
+..+++|++|++++|.+.+..+ +..+++|+.|++++|.+.+..+ +..+++|++|++++|+++
T Consensus 173 --------------~~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~~~--~~~~~~L~~L~l~~n~l~ 234 (347)
T 4fmz_A 173 --------------IANLTDLYSLSLNYNQIEDISP--LASLTSLHYFTAYVNQITDITP--VANMTRLNSLKIGNNKIT 234 (347)
T ss_dssp --------------GGGCTTCSEEECTTSCCCCCGG--GGGCTTCCEEECCSSCCCCCGG--GGGCTTCCEEECCSSCCC
T ss_pred --------------hccCCCCCEEEccCCccccccc--ccCCCccceeecccCCCCCCch--hhcCCcCCEEEccCCccC
Confidence 3444555555555555554333 5555566666666666554333 556666666666666666
Q ss_pred ccCCccccCCCcCceEecCCCccccccccccCcCCCcEEEeccccccCCCccccccccccceEeccCCccCcccchhhcC
Q 002021 438 GSIPACFSNLTSLRIVSLGSNELTSIPLTFWNLKDILNLNFSSNFLTGSLPLEIGSLKVLVGIDLSRNNFSGVIPTEIGG 517 (979)
Q Consensus 438 ~~~~~~~~~l~~L~~L~L~~N~l~~lp~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~ 517 (979)
+..+ +..+++|++|++++|+++.++ .+..+++|+.|++++|++++. ..+..+++|+.|++++|++++..|..|+.
T Consensus 235 ~~~~--~~~l~~L~~L~l~~n~l~~~~-~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~L~~n~l~~~~~~~l~~ 309 (347)
T 4fmz_A 235 DLSP--LANLSQLTWLEIGTNQISDIN-AVKDLTKLKMLNVGSNQISDI--SVLNNLSQLNSLFLNNNQLGNEDMEVIGG 309 (347)
T ss_dssp CCGG--GTTCTTCCEEECCSSCCCCCG-GGTTCTTCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCGGGHHHHHT
T ss_pred CCcc--hhcCCCCCEEECCCCccCCCh-hHhcCCCcCEEEccCCccCCC--hhhcCCCCCCEEECcCCcCCCcChhHhhc
Confidence 4433 666777777777777777663 466677777777777777754 35777888888888888888888888888
Q ss_pred CcccceeecCCccccCCCCCccccccccccccccccccc
Q 002021 518 LKNLEYLFLGYNRLQGSIPNSFGDLISLKFLNLSNNNLS 556 (979)
Q Consensus 518 l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~ 556 (979)
+++|++|+|++|++++..| +..+++|++|++++|+|+
T Consensus 310 l~~L~~L~L~~n~l~~~~~--~~~l~~L~~L~l~~N~i~ 346 (347)
T 4fmz_A 310 LTNLTTLFLSQNHITDIRP--LASLSKMDSADFANQVIK 346 (347)
T ss_dssp CTTCSEEECCSSSCCCCGG--GGGCTTCSEESSSCC---
T ss_pred cccCCEEEccCCccccccC--hhhhhccceeehhhhccc
Confidence 8999999999999887666 888889999999999876
No 289
>3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A
Probab=100.00 E-value=7.2e-35 Score=315.96 Aligned_cols=234 Identities=14% Similarity=0.036 Sum_probs=185.7
Q ss_pred CCCCCCceeeeecceEEEEEEc-CCCcEEEEEEeccccc---cchhcHHHHHHHHHhcCCCCeeeEEEeeccCCeeEEEE
Q 002021 682 DGFSENNLIGRGGFGSVYKASL-GDGMEVAVKVFTSQCG---RAFKSFDVECEIMKSIRHRNLIKVISSCSNEEFKALVL 757 (979)
Q Consensus 682 ~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vAvK~~~~~~~---~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 757 (979)
+.|+..+.||+|+||.||+|.. .+++.||||++..... ...+.+.+|+++++.++||||+++++++.+++..|+||
T Consensus 31 ~~y~i~~~lg~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~lv~ 110 (286)
T 3uqc_A 31 GRYRLLIFHGGVPPLQFWQALDTALDRQVALTFVDPQGVLPDDVLQETLSRTLRLSRIDKPGVARVLDVVHTRAGGLVVA 110 (286)
T ss_dssp TTEEEEEEEEBSTTCEEEEEEETTTTEEEEEEESCTTCCSCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEE
T ss_pred CcEEEEEEEcccCCeEEEEEEecCCCceEEEEEECcccccCHHHHHHHHHHHHHHhcCCCCCcceeeEEEEECCcEEEEE
Confidence 6799999999999999999965 4689999999975532 22467889999999999999999999999999999999
Q ss_pred EecCCCccceeeccCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCEEeCCCCcEEEEeeccccccCCCCC
Q 002021 758 EYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFSIAKMLTGEDQ 837 (979)
Q Consensus 758 E~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~i~H~Dik~~NIll~~~~~~kl~Dfg~~~~~~~~~~ 837 (979)
||+++++|.+++... ....++.+++.|++.||+||| +++|+||||||+||+++.++.+||+++|
T Consensus 111 e~~~g~~L~~~l~~~---~~~~~~~~i~~ql~~aL~~lH---~~givH~Dikp~NIll~~~g~~kl~~~~---------- 174 (286)
T 3uqc_A 111 EWIRGGSLQEVADTS---PSPVGAIRAMQSLAAAADAAH---RAGVALSIDHPSRVRVSIDGDVVLAYPA---------- 174 (286)
T ss_dssp ECCCEEEHHHHHTTC---CCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCSGGGEEEETTSCEEECSCC----------
T ss_pred EecCCCCHHHHHhcC---CChHHHHHHHHHHHHHHHHHH---HCCCccCCCCcccEEEcCCCCEEEEecc----------
Confidence 999999999998543 466688999999999999999 9999999999999999999999997443
Q ss_pred cceecccccCCCCCCccccCCCCCCCchhHHHHHHHHHHHHcCCCCCcccccCcchHhHhhhhhcCCccchhhcccccCc
Q 002021 838 SMIQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFTGKKPTDEIFNGEMTLKHWVNDWLPISTMEVVDANLLSQ 917 (979)
Q Consensus 838 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 917 (979)
|++| ++.++|||||||++|||+||+.||......+..... .......
T Consensus 175 ------------~~~~-------~~~~~Di~slG~il~elltg~~Pf~~~~~~~~~~~~--------------~~~~~~~ 221 (286)
T 3uqc_A 175 ------------TMPD-------ANPQDDIRGIGASLYALLVNRWPLPEAGVRSGLAPA--------------ERDTAGQ 221 (286)
T ss_dssp ------------CCTT-------CCHHHHHHHHHHHHHHHHHSEECSCCCSBCCCSEEC--------------CBCTTSC
T ss_pred ------------ccCC-------CCchhHHHHHHHHHHHHHHCCCCCCcCCcchhhHHH--------------HHHhccC
Confidence 3332 678999999999999999999999763322110000 0000000
Q ss_pred hhhhhHHHHHHHHHHHHHHHhccccCcCCCCCHHHHHHHHHHhHHhhc
Q 002021 918 EDIHFVAKEQCVSFVFNLAMECTMEFPKQRINAKEIVTKLLKIRDSLL 965 (979)
Q Consensus 918 ~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~eil~~L~~~~~~~~ 965 (979)
..........++.++.+++.+||+.||++| |+.|+++.|+++.....
T Consensus 222 ~~~~~~~~~~~~~~l~~li~~~l~~dP~~R-s~~el~~~L~~~~~~~~ 268 (286)
T 3uqc_A 222 PIEPADIDRDIPFQISAVAARSVQGDGGIR-SASTLLNLMQQATAVAD 268 (286)
T ss_dssp BCCHHHHCTTSCHHHHHHHHHHHCTTSSCC-CHHHHHHHHHHHHC---
T ss_pred CCChhhcccCCCHHHHHHHHHHcccCCccC-CHHHHHHHHHHHhccCC
Confidence 000111223456779999999999999999 99999999999876544
No 290
>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}
Probab=100.00 E-value=2e-34 Score=351.01 Aligned_cols=242 Identities=21% Similarity=0.316 Sum_probs=194.6
Q ss_pred hCCCCCCceeeeecceEEEEEEcC--CCcEEEEEEeccccc-cchhcHHHHHHHHHhcCCCCeeeEEEeeccCCe-----
Q 002021 681 TDGFSENNLIGRGGFGSVYKASLG--DGMEVAVKVFTSQCG-RAFKSFDVECEIMKSIRHRNLIKVISSCSNEEF----- 752 (979)
Q Consensus 681 ~~~~~~~~~lG~G~~g~Vy~~~~~--~~~~vAvK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~----- 752 (979)
.++|++.+.||+|+||.||+|... +|+.||||++..... ...+.+.+|++++++++||||+++++++.+.+.
T Consensus 79 ~~~y~i~~~lg~G~~g~Vy~a~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~~~~ 158 (681)
T 2pzi_A 79 AGQYEVKGCIAHGGLGWIYLALDRNVNGRPVVLKGLVHSGDAEAQAMAMAERQFLAEVVHPSIVQIFNFVEHTDRHGDPV 158 (681)
T ss_dssp TTTEEEEEEEEEETTEEEEEEEEGGGTTEEEEEEESCSSCCHHHHHHHHHHHGGGGGCCCTTBCCEEEEEEEECTTSCEE
T ss_pred CCceEEEEEEeeCCCeEEEEEEEcCCCCcEEEEEEeCccCCHHHHHHHHHHHHHHHhcCCCCcCeEeeeEeecCCCCCce
Confidence 367999999999999999999653 689999999865432 344578899999999999999999999977655
Q ss_pred eEEEEEecCCCccceeeccCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCEEeCCCCcEEEEeecccccc
Q 002021 753 KALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFSIAKML 832 (979)
Q Consensus 753 ~~lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~i~H~Dik~~NIll~~~~~~kl~Dfg~~~~~ 832 (979)
.|+||||+++++|.+++.. .+++.+++.++.||+.||+||| +++|+||||||+||+++.+ .+||+|||+++..
T Consensus 159 ~~lv~E~~~g~~L~~~~~~---~l~~~~~~~~~~qi~~aL~~lH---~~giiHrDlkp~NIll~~~-~~kl~DFG~a~~~ 231 (681)
T 2pzi_A 159 GYIVMEYVGGQSLKRSKGQ---KLPVAEAIAYLLEILPALSYLH---SIGLVYNDLKPENIMLTEE-QLKLIDLGAVSRI 231 (681)
T ss_dssp EEEEEECCCCEECC----C---CCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECSS-CEEECCCTTCEET
T ss_pred eEEEEEeCCCCcHHHHHhC---CCCHHHHHHHHHHHHHHHHHHH---HCCCeecccChHHeEEeCC-cEEEEecccchhc
Confidence 6999999999999998765 5899999999999999999999 9999999999999999985 8999999999876
Q ss_pred CCCCCcceecccccCCCCCCccccCCCCCCCchhHHHHHHHHHHHHcCCCCCcccccCcchHhHhhhhhcCCccchhhcc
Q 002021 833 TGEDQSMIQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFTGKKPTDEIFNGEMTLKHWVNDWLPISTMEVVDA 912 (979)
Q Consensus 833 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 912 (979)
... ....||++|+|||++.++ ++.++|||||||++|||++|..||........ +
T Consensus 232 ~~~------~~~~gt~~y~aPE~~~~~-~~~~sDi~slG~~l~~l~~g~~~~~~~~~~~~----------~--------- 285 (681)
T 2pzi_A 232 NSF------GYLYGTPGFQAPEIVRTG-PTVATDIYTVGRTLAALTLDLPTRNGRYVDGL----------P--------- 285 (681)
T ss_dssp TCC------SCCCCCTTTSCTTHHHHC-SCHHHHHHHHHHHHHHHHSCCCEETTEECSSC----------C---------
T ss_pred ccC------CccCCCccccCHHHHcCC-CCCceehhhhHHHHHHHHhCCCCCcccccccc----------c---------
Confidence 432 345699999999988655 48899999999999999999888754211100 0
Q ss_pred cccCchhhhhHHHHHHHHHHHHHHHhccccCcCCCC-CHHHHHHHHHHhHHh
Q 002021 913 NLLSQEDIHFVAKEQCVSFVFNLAMECTMEFPKQRI-NAKEIVTKLLKIRDS 963 (979)
Q Consensus 913 ~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rp-s~~eil~~L~~~~~~ 963 (979)
.. ......++.+.+++.+||+.||++|| +++++.+.+..+...
T Consensus 286 ----~~----~~~~~~~~~l~~li~~~l~~dP~~R~~~~~~l~~~l~~~~~~ 329 (681)
T 2pzi_A 286 ----ED----DPVLKTYDSYGRLLRRAIDPDPRQRFTTAEEMSAQLTGVLRE 329 (681)
T ss_dssp ----TT----CHHHHHCHHHHHHHHHHTCSSGGGSCSSHHHHHHHHHHHHHH
T ss_pred ----cc----ccccccCHHHHHHHhhhccCChhhCCCHHHHHHHHHHHHHHH
Confidence 00 01112345688999999999999999 566677777766543
No 291
>3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A*
Probab=100.00 E-value=3e-34 Score=314.06 Aligned_cols=231 Identities=20% Similarity=0.286 Sum_probs=181.5
Q ss_pred CCCCCC-ceeeeecceEEEEEE-cCCCcEEEEEEeccccccchhcHHHHHHHH-HhcCCCCeeeEEEeecc----CCeeE
Q 002021 682 DGFSEN-NLIGRGGFGSVYKAS-LGDGMEVAVKVFTSQCGRAFKSFDVECEIM-KSIRHRNLIKVISSCSN----EEFKA 754 (979)
Q Consensus 682 ~~~~~~-~~lG~G~~g~Vy~~~-~~~~~~vAvK~~~~~~~~~~~~~~~E~~~l-~~l~h~niv~l~~~~~~----~~~~~ 754 (979)
++|... +.||+|+||.||+|. ..+++.||||++.. ...+.+|++++ +..+||||+++++++.. ....+
T Consensus 17 ~~y~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~-----~~~~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~ 91 (299)
T 3m2w_A 17 DDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQD-----CPKARREVELHWRASQCPHIVRIVDVYENLYAGRKCLL 91 (299)
T ss_dssp GTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEC-----SHHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEEE
T ss_pred cchhhcCcccccCCCeEEEEEEEcCCCcEEEEEEecc-----cHHHHHHHHHHHHhccCCCchhHHhhhhhhcCCCceEE
Confidence 566666 789999999999995 46789999999853 24577899888 55689999999999876 67789
Q ss_pred EEEEecCCCccceeeccCC-CCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCEEeCC---CCcEEEEeecccc
Q 002021 755 LVLEYMPHGSLEKYLYSSN-CILDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDD---NMVAHLSDFSIAK 830 (979)
Q Consensus 755 lv~E~~~~g~L~~~l~~~~-~~l~~~~~~~i~~~ia~~L~~LH~~~~~~i~H~Dik~~NIll~~---~~~~kl~Dfg~~~ 830 (979)
+||||+++|+|.+++.... ..+++.+++.++.|++.||+||| +++|+||||||+||+++. ++.+||+|||++.
T Consensus 92 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH---~~~i~H~dlkp~Nil~~~~~~~~~~kl~Dfg~a~ 168 (299)
T 3m2w_A 92 IVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLH---SINIAHRDVKPENLLYTSKRPNAILKLTDFGFAK 168 (299)
T ss_dssp EEECCCCSCBHHHHHHHCTTCCCBHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEESSSSTTCCEEECCCTTCE
T ss_pred EEEeecCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHH---hCCcccCCCCHHHEEEecCCCCCcEEEecccccc
Confidence 9999999999999997653 46899999999999999999999 999999999999999997 7899999999986
Q ss_pred ccCCCCCcceecccccCCCCCCccccCCCCCCCchhHHHHHHHHHHHHcCCCCCcccccCcchHhHhhhhhcCCccchhh
Q 002021 831 MLTGEDQSMIQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFTGKKPTDEIFNGEMTLKHWVNDWLPISTMEVV 910 (979)
Q Consensus 831 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~ 910 (979)
... +..++.++||||+||++|||++|+.||.......... ......
T Consensus 169 ~~~------------------------~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~~----------~~~~~~ 214 (299)
T 3m2w_A 169 ETT------------------------GEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISP----------GMKTRI 214 (299)
T ss_dssp ECT------------------------TCGGGGHHHHHHHHHHHHHHHHSSCSCCC-------C----------CSCCSS
T ss_pred ccc------------------------cccCCchhhHHHHHHHHHHHHHCCCCCCCCcchhhhH----------HHHHHH
Confidence 542 1346789999999999999999999996532211000 000000
Q ss_pred cccccCchhhhhHHHHHHHHHHHHHHHhccccCcCCCCCHHHHHHHH
Q 002021 911 DANLLSQEDIHFVAKEQCVSFVFNLAMECTMEFPKQRINAKEIVTKL 957 (979)
Q Consensus 911 ~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~eil~~L 957 (979)
..............++.++.+++.+||+.||++|||+.|+++|-
T Consensus 215 ---~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rps~~e~l~hp 258 (299)
T 3m2w_A 215 ---RMGQYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHP 258 (299)
T ss_dssp ---CTTCCSSCHHHHTTSCHHHHHHHHHHTCSSTTTSCCHHHHHTSH
T ss_pred ---hhccccCCchhcccCCHHHHHHHHHHcccChhhCCCHHHHhcCh
Confidence 00001111122345677899999999999999999999999863
No 292
>3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii}
Probab=100.00 E-value=7e-35 Score=333.36 Aligned_cols=240 Identities=16% Similarity=0.156 Sum_probs=180.0
Q ss_pred CCCCCCceeeeecceEEEEEE-cCCCcEEEEEEecccc---ccchhcHHHHHHHHHhcCC-CCee---------------
Q 002021 682 DGFSENNLIGRGGFGSVYKAS-LGDGMEVAVKVFTSQC---GRAFKSFDVECEIMKSIRH-RNLI--------------- 741 (979)
Q Consensus 682 ~~~~~~~~lG~G~~g~Vy~~~-~~~~~~vAvK~~~~~~---~~~~~~~~~E~~~l~~l~h-~niv--------------- 741 (979)
..|...+.||+|+||.||+|. ..+|+.||||++.... ....+.+.+|+.+++.++| ++..
T Consensus 78 ~~~~~~~~LG~G~fG~Vy~a~~~~~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 157 (413)
T 3dzo_A 78 RTLVRGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFDLV 157 (413)
T ss_dssp EEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEECCSCC----CCHHHHHHHHGGGGSTTCCSHHHHHHHTCBCCCCEEE
T ss_pred eeEEEecccccCCCEEEEEEEecCCCCceEEEEEecCCCccHHHHHHHHHHHHHHHhhccCCCHHHHHHhcccccchhhc
Confidence 446677899999999999996 6689999999987432 2336778999999999987 2211
Q ss_pred ------eEEEeecc-----CCeeEEEEEecCCCccceeec------cCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeE
Q 002021 742 ------KVISSCSN-----EEFKALVLEYMPHGSLEKYLY------SSNCILDIFQRLNIMIDVASALEYLHFGYSAPVI 804 (979)
Q Consensus 742 ------~l~~~~~~-----~~~~~lv~E~~~~g~L~~~l~------~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~i~ 804 (979)
.++.++.. ....+++|+++ +++|.+++. .....+++..++.++.|+++||+||| +++|+
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~L~~ll~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH---~~~ii 233 (413)
T 3dzo_A 158 KDPQKKKMIRVRLDERDMWVLSRFFLYPRM-QSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLH---HYGLV 233 (413)
T ss_dssp ECCC---------------CCSEEEEEECC-SEEHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHH---HTTEE
T ss_pred ccCCCCccccccCCCccccccceEEEeehh-cCCHHHHHHHhhcccccCCCCCHHHHHHHHHHHHHHHHHHH---hCCcc
Confidence 11111111 22356777765 679998884 23446788899999999999999999 99999
Q ss_pred ecCCCCCCEEeCCCCcEEEEeeccccccCCCCCcceecccccCCCCCCcccc----------CCCCCCCchhHHHHHHHH
Q 002021 805 HCDLKPSNVLLDDNMVAHLSDFSIAKMLTGEDQSMIQTQTLATIGYMAPEYG----------REGRVSANGDVYSFGIML 874 (979)
Q Consensus 805 H~Dik~~NIll~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~----------~~~~~~~~~DvwslG~il 874 (979)
||||||+|||++.++.+||+|||+++..... .....| +.|+|||++ .+..++.++|||||||++
T Consensus 234 HrDiKp~NILl~~~~~~kL~DFG~a~~~~~~-----~~~~~g-~~y~aPE~~~~~~~~~~~~~~~~~~~~~DvwSlGvil 307 (413)
T 3dzo_A 234 HTYLRPVDIVLDQRGGVFLTGFEHLVRDGAS-----AVSPIG-RGFAPPETTAERMLPFGQHHPTLMTFAFDTWTLGLAI 307 (413)
T ss_dssp CSCCCGGGEEECTTCCEEECCGGGCEETTEE-----ECCCCC-TTTCCHHHHHHHTSTTGGGCCEEECHHHHHHHHHHHH
T ss_pred cCCcccceEEEecCCeEEEEeccceeecCCc-----cccCCC-CceeCchhhhccccccccccCcCCCchhhHHHHHHHH
Confidence 9999999999999999999999998864322 244567 999999998 556688999999999999
Q ss_pred HHHHcCCCCCcccccCcchHhHhhhhhcCCccchhhcccccCchhhhhHHHHHHHHHHHHHHHhccccCcCCCCCHHHHH
Q 002021 875 METFTGKKPTDEIFNGEMTLKHWVNDWLPISTMEVVDANLLSQEDIHFVAKEQCVSFVFNLAMECTMEFPKQRINAKEIV 954 (979)
Q Consensus 875 ~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~eil 954 (979)
|||++|+.||......+.. ..++. ....++..+.+++.+||+.||++||++.|++
T Consensus 308 ~elltg~~Pf~~~~~~~~~-------------~~~~~------------~~~~~~~~~~~li~~~l~~dP~~Rpt~~~~l 362 (413)
T 3dzo_A 308 YWIWCADLPNTDDAALGGS-------------EWIFR------------SCKNIPQPVRALLEGFLRYPKEDRLLPLQAM 362 (413)
T ss_dssp HHHHHSSCCCCTTGGGSCS-------------GGGGS------------SCCCCCHHHHHHHHHHTCSSGGGSCCHHHHT
T ss_pred HHHHHCCCCCCCcchhhhH-------------HHHHh------------hcccCCHHHHHHHHHHccCChhhCcCHHHHH
Confidence 9999999999753221110 00000 0012346689999999999999999998886
Q ss_pred HH
Q 002021 955 TK 956 (979)
Q Consensus 955 ~~ 956 (979)
++
T Consensus 363 ~~ 364 (413)
T 3dzo_A 363 ET 364 (413)
T ss_dssp TS
T ss_pred hC
Confidence 55
No 293
>2vuw_A Serine/threonine-protein kinase haspin; cell cycle, transferase, CAsp8, nucleotide binding; HET: MSE 5ID MPD; 1.80A {Homo sapiens} PDB: 3f2n_A* 3e7v_A* 3dlz_A* 3fmd_A* 3iq7_A* 2wb8_A
Probab=100.00 E-value=3.3e-34 Score=319.29 Aligned_cols=244 Identities=16% Similarity=0.191 Sum_probs=185.4
Q ss_pred CCCCCCceeeeecceEEEEEEcCCCcEEEEEEeccccc--------cchhcHHHHHHHHHhcC---------CCCeeeEE
Q 002021 682 DGFSENNLIGRGGFGSVYKASLGDGMEVAVKVFTSQCG--------RAFKSFDVECEIMKSIR---------HRNLIKVI 744 (979)
Q Consensus 682 ~~~~~~~~lG~G~~g~Vy~~~~~~~~~vAvK~~~~~~~--------~~~~~~~~E~~~l~~l~---------h~niv~l~ 744 (979)
++|+..+.||+|+||+||+|+. +|+.||||++..... ...+.+.+|+++++.++ ||||+++.
T Consensus 20 ~~y~~~~~lG~G~~g~V~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~~~~~~~h~niv~l~ 98 (336)
T 2vuw_A 20 EKLQRCEKIGEGVFGEVFQTIA-DHTPVAIKIIAIEGPDLVNGSHQKTFEEILPEIIISKELSLLSGEVCNRTEGFIGLN 98 (336)
T ss_dssp HHHHTCEEEEEETTEEEEEEEE-TTEEEEEEEEEESCSSCBTTBCCBCHHHHHHHHHHHHHHHHGGGCSSSBCCCBCCEE
T ss_pred ccchheeeecccCceEEEEEEe-CCceEEEEEEecCCccccccccchhHHHHHHHHHHHHHHHHhhccccccCCchhhhc
Confidence 5678889999999999999987 789999999975421 22367889999999886 66666666
Q ss_pred Ee-----------------ecc-------------CCeeEEEEEecCCCccceeeccCCCCCCHHHHHHHHHHHHHHHHH
Q 002021 745 SS-----------------CSN-------------EEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEY 794 (979)
Q Consensus 745 ~~-----------------~~~-------------~~~~~lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~L~~ 794 (979)
++ +.+ .+..++||||+++|++.+.+.+ ..+++.+++.++.||+.||+|
T Consensus 99 ~~~~~~~~~hp~iv~~~~~~~~~~~~~~~~~~~~~~~~~~lv~E~~~~g~ll~~~~~--~~~~~~~~~~i~~qi~~aL~~ 176 (336)
T 2vuw_A 99 SVHCVQGSYPPLLLKAWDHYNSTKGSANDRPDFFKDDQLFIVLEFEFGGIDLEQMRT--KLSSLATAKSILHQLTASLAV 176 (336)
T ss_dssp EEEEEESSCCHHHHHHHHHHHHHTCCSSCCSCCCCTTCEEEEEEEECCCEETGGGTT--TCCCHHHHHHHHHHHHHHHHH
T ss_pred ceeEecCCCcHHHHHHHHHHhhhccccccCccccccCeEEEEEEecCCCccHHHHHh--cCCCHHHHHHHHHHHHHHHHH
Confidence 54 332 6789999999999987777654 358999999999999999999
Q ss_pred HhcCCCCCeEecCCCCCCEEeCCCC--------------------cEEEEeeccccccCCCCCcceecccccCCCCCCcc
Q 002021 795 LHFGYSAPVIHCDLKPSNVLLDDNM--------------------VAHLSDFSIAKMLTGEDQSMIQTQTLATIGYMAPE 854 (979)
Q Consensus 795 LH~~~~~~i~H~Dik~~NIll~~~~--------------------~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE 854 (979)
||+ +++|+||||||+|||++.++ .+||+|||+|+.... ....||+.|+|||
T Consensus 177 lH~--~~~ivHrDlKp~NILl~~~~~~~~~~~~~~~~~~~~~~~~~vkL~DFG~a~~~~~-------~~~~gt~~y~aPE 247 (336)
T 2vuw_A 177 AEA--SLRFEHRDLHWGNVLLKKTSLKKLHYTLNGKSSTIPSCGLQVSIIDYTLSRLERD-------GIVVFCDVSMDED 247 (336)
T ss_dssp HHH--HHCCBCSCCCGGGEEEEECSCSEEEEEETTEEEEEECTTEEEEECCCTTCBEEET-------TEEECCCCTTCSG
T ss_pred HHH--hCCEeECCCCHHHEEEeccCCcceeeeccCccccccCCCceEEEeeccccEecCC-------CcEEEeecccChh
Confidence 993 47999999999999999887 899999999987642 2347999999999
Q ss_pred ccCCCCCCCchhHHHHHHH-HHHHHcCCCCCcccccCcchHhHhhhhhcCCccchhhcccccCchhhhhHHHHHHHHHHH
Q 002021 855 YGREGRVSANGDVYSFGIM-LMETFTGKKPTDEIFNGEMTLKHWVNDWLPISTMEVVDANLLSQEDIHFVAKEQCVSFVF 933 (979)
Q Consensus 855 ~~~~~~~~~~~DvwslG~i-l~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 933 (979)
++.+.. +.++||||+|++ .+++++|..||.... |..... ..+...... ........+..+++++.
T Consensus 248 ~~~g~~-~~~~Diwsl~~~~~~~~~~g~~p~~~~~--------~~~~~~----~~~~~~~~~-~~~~~~~~~~~~s~~~~ 313 (336)
T 2vuw_A 248 LFTGDG-DYQFDIYRLMKKENNNRWGEYHPYSNVL--------WLHYLT----DKMLKQMTF-KTKCNTPAMKQIKRKIQ 313 (336)
T ss_dssp GGCCCS-SHHHHHHHHHHHHHTTCTTSCCTHHHHH--------HHHHHH----HHHHHTCCC-SSCCCSHHHHHHHHHHH
T ss_pred hhcCCC-ccceehhhhhCCCCcccccccCCCcchh--------hhhHHH----Hhhhhhhcc-CcccchhhhhhcCHHHH
Confidence 998665 889999998777 778888999975411 100000 000000000 01111223456788899
Q ss_pred HHHHhccccCcCCCCCHHHHH-HH
Q 002021 934 NLAMECTMEFPKQRINAKEIV-TK 956 (979)
Q Consensus 934 ~l~~~cl~~dP~~Rps~~eil-~~ 956 (979)
+++.+|++.| |+.|++ +|
T Consensus 314 dli~~~L~~d-----sa~e~l~~H 332 (336)
T 2vuw_A 314 EFHRTMLNFS-----SATDLLCQH 332 (336)
T ss_dssp HHHHHGGGSS-----SHHHHHHHC
T ss_pred HHHHHHhccC-----CHHHHHhcC
Confidence 9999999976 999998 64
No 294
>1xku_A Decorin; proteoglycan, leucine-rich repeat, structural protein; HET: NAG; 2.15A {Bos taurus} SCOP: c.10.2.7 PDB: 1xec_A* 1xcd_A*
Probab=100.00 E-value=6.5e-32 Score=299.91 Aligned_cols=292 Identities=21% Similarity=0.212 Sum_probs=235.3
Q ss_pred EEEecCCCccccCCCCCcCCCCCCeeeccCCcccccCCccccccCcccEEecccccccccCCccccCCCCCcEEEccCCc
Q 002021 76 VLNISSLNLTGTIPSQLGNLSSLQSLNLSFNRLFGSIPSAIFTTYTLKYVCLRGNQLSGTFPSFISNKSSLQHLDLSSNA 155 (979)
Q Consensus 76 ~l~l~~~~l~g~~~~~l~~l~~L~~L~L~~n~~~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~N~ 155 (979)
.+++++++++ .+|..+. ++|++|+|++|++++..|..+..+++|++|+|++|++++..|..++++++|++|+|++|.
T Consensus 35 ~l~~~~~~l~-~lp~~~~--~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~ 111 (330)
T 1xku_A 35 VVQCSDLGLE-KVPKDLP--PDTALLDLQNNKITEIKDGDFKNLKNLHTLILINNKISKISPGAFAPLVKLERLYLSKNQ 111 (330)
T ss_dssp EEECTTSCCC-SCCCSCC--TTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSSC
T ss_pred EEEecCCCcc-ccCccCC--CCCeEEECCCCcCCEeChhhhccCCCCCEEECCCCcCCeeCHHHhcCCCCCCEEECCCCc
Confidence 3455566666 4666554 689999999999998877899999999999999999999889999999999999999999
Q ss_pred cCchhhhhhhccCCcccCCCCccceeecccccccccccccccCCCCCCceecCCCeeee--cCCccccccCccceeeccC
Q 002021 156 LSGEIRANICREIPREFGNLPELELMSLAANNLQGKIPLKIGNLRNLEKLDIGDNKLVG--IAPIAIFNVSTLKILGLQD 233 (979)
Q Consensus 156 l~~~~~~~~~~~ip~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~--~~p~~l~~l~~L~~L~L~~ 233 (979)
++ .+|..+. ++|++|++++|.+++..+..+.++++|++|++++|++.. ..+..+.++++|+.|++++
T Consensus 112 l~---------~l~~~~~--~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l~~L~~L~l~~ 180 (330)
T 1xku_A 112 LK---------ELPEKMP--KTLQELRVHENEITKVRKSVFNGLNQMIVVELGTNPLKSSGIENGAFQGMKKLSYIRIAD 180 (330)
T ss_dssp CS---------BCCSSCC--TTCCEEECCSSCCCBBCHHHHTTCTTCCEEECCSSCCCGGGBCTTGGGGCTTCCEEECCS
T ss_pred CC---------ccChhhc--ccccEEECCCCcccccCHhHhcCCccccEEECCCCcCCccCcChhhccCCCCcCEEECCC
Confidence 97 3676655 799999999999998888889999999999999999964 7788899999999999999
Q ss_pred CCCcCCCcccccCCCCCcCEEEccCCccccccCcccccCCCCcEEeccccccccccCccccccccccceecccccccccc
Q 002021 234 NSLSGCLSSIGYARLPNLEILSLWGNNFSGTIPRFIFNASKLSILDLEGNSFSGFIPNTFGNLRNLSWLVLSDNYLTSST 313 (979)
Q Consensus 234 N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~ 313 (979)
|.++..+... .++|++|++++|++++..|..+..+++|++|+|++|.+++..+..|..+++|++|+|++|+++.++
T Consensus 181 n~l~~l~~~~----~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~lp 256 (330)
T 1xku_A 181 TNITTIPQGL----PPSLTELHLDGNKITKVDAASLKGLNNLAKLGLSFNSISAVDNGSLANTPHLRELHLNNNKLVKVP 256 (330)
T ss_dssp SCCCSCCSSC----CTTCSEEECTTSCCCEECTGGGTTCTTCCEEECCSSCCCEECTTTGGGSTTCCEEECCSSCCSSCC
T ss_pred CccccCCccc----cccCCEEECCCCcCCccCHHHhcCCCCCCEEECCCCcCceeChhhccCCCCCCEEECCCCcCccCC
Confidence 9999765432 389999999999999888999999999999999999999888889999999999999999999776
Q ss_pred chhhhhhcccCCCCccEEEccCCCCcccCCccccccccccccEEEccCccccCCCCccccCCCcccEEEecCCCCCc--h
Q 002021 314 QELSFLSSLSNCKFLKYFDLSYNPLYRILPRTTVGNLSHSLEEFKMSNCNISGGIPEEISNLTNLRTIYLGGNKLNG--S 391 (979)
Q Consensus 314 ~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~~L~~L~L~~n~i~~~~p~~l~~l~~L~~L~L~~N~l~~--~ 391 (979)
. .+..+++|++|++++|+++.+.+..+.... .....+.|+.|++++|.+.. .
T Consensus 257 ~------~l~~l~~L~~L~l~~N~i~~~~~~~f~~~~--------------------~~~~~~~l~~l~l~~N~~~~~~i 310 (330)
T 1xku_A 257 G------GLADHKYIQVVYLHNNNISAIGSNDFCPPG--------------------YNTKKASYSGVSLFSNPVQYWEI 310 (330)
T ss_dssp T------TTTTCSSCCEEECCSSCCCCCCTTSSSCSS--------------------CCTTSCCCSEEECCSSSSCGGGS
T ss_pred h------hhccCCCcCEEECCCCcCCccChhhcCCcc--------------------cccccccccceEeecCccccccc
Confidence 4 367788899999999998877655443210 01123455555666665542 3
Q ss_pred hHHhhhcCCCCcEEEecCcc
Q 002021 392 ILITLSKLQKLQDLGLKDNK 411 (979)
Q Consensus 392 ~~~~l~~l~~L~~L~L~~N~ 411 (979)
.+..|..+.+++.+++++|+
T Consensus 311 ~~~~f~~~~~l~~l~L~~N~ 330 (330)
T 1xku_A 311 QPSTFRCVYVRAAVQLGNYK 330 (330)
T ss_dssp CGGGGTTCCCGGGEEC----
T ss_pred CccccccccceeEEEecccC
Confidence 44556666666666666553
No 295
>2ft3_A Biglycan; proteoglycan, dimer interface, structural protein, signaling; HET: NAG FLC; 3.40A {Bos taurus}
Probab=100.00 E-value=2.8e-32 Score=303.07 Aligned_cols=291 Identities=22% Similarity=0.202 Sum_probs=233.4
Q ss_pred EEEecCCCccccCCCCCcCCCCCCeeeccCCcccccCCccccccCcccEEecccccccccCCccccCCCCCcEEEccCCc
Q 002021 76 VLNISSLNLTGTIPSQLGNLSSLQSLNLSFNRLFGSIPSAIFTTYTLKYVCLRGNQLSGTFPSFISNKSSLQHLDLSSNA 155 (979)
Q Consensus 76 ~l~l~~~~l~g~~~~~l~~l~~L~~L~L~~n~~~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~N~ 155 (979)
.+++++++++ .+|..+. ++|++|+|++|++++..|.++..+++|++|+|++|++++..|..++++++|++|+|++|.
T Consensus 37 ~l~~~~~~l~-~ip~~~~--~~l~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~ 113 (332)
T 2ft3_A 37 VVQCSDLGLK-AVPKEIS--PDTTLLDLQNNDISELRKDDFKGLQHLYALVLVNNKISKIHEKAFSPLRKLQKLYISKNH 113 (332)
T ss_dssp EEECCSSCCS-SCCSCCC--TTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECGGGSTTCTTCCEEECCSSC
T ss_pred EEECCCCCcc-ccCCCCC--CCCeEEECCCCcCCccCHhHhhCCCCCcEEECCCCccCccCHhHhhCcCCCCEEECCCCc
Confidence 4556667777 6777663 799999999999998888899999999999999999999989999999999999999999
Q ss_pred cCchhhhhhhccCCcccCCCCccceeecccccccccccccccCCCCCCceecCCCeee--ecCCccccccCccceeeccC
Q 002021 156 LSGEIRANICREIPREFGNLPELELMSLAANNLQGKIPLKIGNLRNLEKLDIGDNKLV--GIAPIAIFNVSTLKILGLQD 233 (979)
Q Consensus 156 l~~~~~~~~~~~ip~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~--~~~p~~l~~l~~L~~L~L~~ 233 (979)
++ .+|..+. ++|++|++++|++++..+..++++++|++|++++|+++ +..|..+..+ +|+.|++++
T Consensus 114 l~---------~l~~~~~--~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l-~L~~L~l~~ 181 (332)
T 2ft3_A 114 LV---------EIPPNLP--SSLVELRIHDNRIRKVPKGVFSGLRNMNCIEMGGNPLENSGFEPGAFDGL-KLNYLRISE 181 (332)
T ss_dssp CC---------SCCSSCC--TTCCEEECCSSCCCCCCSGGGSSCSSCCEEECCSCCCBGGGSCTTSSCSC-CCSCCBCCS
T ss_pred CC---------ccCcccc--ccCCEEECCCCccCccCHhHhCCCccCCEEECCCCccccCCCCcccccCC-ccCEEECcC
Confidence 97 3677665 89999999999999877788999999999999999996 4778888888 999999999
Q ss_pred CCCcCCCcccccCCCCCcCEEEccCCccccccCcccccCCCCcEEeccccccccccCccccccccccceecccccccccc
Q 002021 234 NSLSGCLSSIGYARLPNLEILSLWGNNFSGTIPRFIFNASKLSILDLEGNSFSGFIPNTFGNLRNLSWLVLSDNYLTSST 313 (979)
Q Consensus 234 N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~ 313 (979)
|++++.+... .++|++|++++|++++..+..+..+++|++|+|++|++++..+..|..+++|++|+|++|+++.++
T Consensus 182 n~l~~l~~~~----~~~L~~L~l~~n~i~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~lp 257 (332)
T 2ft3_A 182 AKLTGIPKDL----PETLNELHLDHNKIQAIELEDLLRYSKLYRLGLGHNQIRMIENGSLSFLPTLRELHLDNNKLSRVP 257 (332)
T ss_dssp SBCSSCCSSS----CSSCSCCBCCSSCCCCCCTTSSTTCTTCSCCBCCSSCCCCCCTTGGGGCTTCCEEECCSSCCCBCC
T ss_pred CCCCccCccc----cCCCCEEECCCCcCCccCHHHhcCCCCCCEEECCCCcCCcCChhHhhCCCCCCEEECCCCcCeecC
Confidence 9999865432 378999999999999888888999999999999999999888888999999999999999998776
Q ss_pred chhhhhhcccCCCCccEEEccCCCCcccCCccccccccccccEEEccCccccCCCCccccCCCcccEEEecCCCCC--ch
Q 002021 314 QELSFLSSLSNCKFLKYFDLSYNPLYRILPRTTVGNLSHSLEEFKMSNCNISGGIPEEISNLTNLRTIYLGGNKLN--GS 391 (979)
Q Consensus 314 ~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~~L~~L~L~~n~i~~~~p~~l~~l~~L~~L~L~~N~l~--~~ 391 (979)
.. +..+++|++|++++|+++.+.+..+..... -...++|+.|++++|.+. +.
T Consensus 258 ~~------l~~l~~L~~L~l~~N~l~~~~~~~~~~~~~--------------------~~~~~~l~~L~l~~N~~~~~~~ 311 (332)
T 2ft3_A 258 AG------LPDLKLLQVVYLHTNNITKVGVNDFCPVGF--------------------GVKRAYYNGISLFNNPVPYWEV 311 (332)
T ss_dssp TT------GGGCTTCCEEECCSSCCCBCCTTSSSCSSC--------------------CSSSCCBSEEECCSSSSCGGGS
T ss_pred hh------hhcCccCCEEECCCCCCCccChhHcccccc--------------------ccccccccceEeecCccccccc
Confidence 53 567888888999888888775544332110 011345556666666555 44
Q ss_pred hHHhhhcCCCCcEEEecCcc
Q 002021 392 ILITLSKLQKLQDLGLKDNK 411 (979)
Q Consensus 392 ~~~~l~~l~~L~~L~L~~N~ 411 (979)
.+..|..+++|+.+++++|+
T Consensus 312 ~~~~~~~l~~L~~l~l~~n~ 331 (332)
T 2ft3_A 312 QPATFRCVTDRLAIQFGNYK 331 (332)
T ss_dssp CGGGGTTBCCSTTEEC----
T ss_pred Ccccccccchhhhhhccccc
Confidence 55556666666666665553
No 296
>1z7x_W Ribonuclease inhibitor; leucine-rich repeat, enzyme- inhibitor complex, structural genomics, protein structure initiative, PSI, CESG; HET: CIT; 1.95A {Homo sapiens} SCOP: c.10.1.1 PDB: 2q4g_W* 2bex_A 1a4y_A 2bnh_A 1dfj_I
Probab=100.00 E-value=1.6e-35 Score=345.46 Aligned_cols=360 Identities=20% Similarity=0.207 Sum_probs=179.5
Q ss_pred CCCcEEEccCCccCchhhhhhhccCCcccCCCCccceeecccccccc----cccccccCCCCCCceecCCCeeeecCCcc
Q 002021 144 SSLQHLDLSSNALSGEIRANICREIPREFGNLPELELMSLAANNLQG----KIPLKIGNLRNLEKLDIGDNKLVGIAPIA 219 (979)
Q Consensus 144 ~~L~~L~Ls~N~l~~~~~~~~~~~ip~~l~~l~~L~~L~L~~N~l~~----~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~ 219 (979)
++|++|||++|+++... ....+..+++|++|+|++|.+++ .++..+..+++|++|+|++|++.+..+..
T Consensus 3 ~~l~~L~Ls~~~l~~~~-------~~~~~~~~~~L~~L~L~~~~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~l~~~~~~~ 75 (461)
T 1z7x_W 3 LDIQSLDIQCEELSDAR-------WAELLPLLQQCQVVRLDDCGLTEARCKDISSALRVNPALAELNLRSNELGDVGVHC 75 (461)
T ss_dssp EEEEEEEEESCCCCHHH-------HHHHHHHHTTCSEEEEESSCCCHHHHHHHHHHHHTCTTCCEEECTTCCCHHHHHHH
T ss_pred ccceehhhhhcccCchh-------HHHHHhhcCCccEEEccCCCCCHHHHHHHHHHHHhCCCcCEEeCCCCcCChHHHHH
Confidence 56788888888887542 22335667788888888888774 34566777788888888888877654433
Q ss_pred ccc-cC----ccceeeccCCCCcCCCcccccCCCCCcCEEEccCCccccccCcccccCCCCcEEeccccccccccCcccc
Q 002021 220 IFN-VS----TLKILGLQDNSLSGCLSSIGYARLPNLEILSLWGNNFSGTIPRFIFNASKLSILDLEGNSFSGFIPNTFG 294 (979)
Q Consensus 220 l~~-l~----~L~~L~L~~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~~~~~~ 294 (979)
+.. ++ +|+.|+|++|+++.... ..++..+..+++|++|+|++|.+++..+..+.
T Consensus 76 l~~~l~~~~~~L~~L~L~~n~i~~~~~---------------------~~l~~~l~~~~~L~~L~Ls~n~i~~~~~~~l~ 134 (461)
T 1z7x_W 76 VLQGLQTPSCKIQKLSLQNCCLTGAGC---------------------GVLSSTLRTLPTLQELHLSDNLLGDAGLQLLC 134 (461)
T ss_dssp HHHTTCSTTCCCCEEECTTSCCBGGGH---------------------HHHHHHTTSCTTCCEEECCSSBCHHHHHHHHH
T ss_pred HHHHHhhCCCceeEEEccCCCCCHHHH---------------------HHHHHHHccCCceeEEECCCCcCchHHHHHHH
Confidence 322 33 45555555555543110 12334444444444444444444332222221
Q ss_pred c-----cccccceeccccccccccchhhhhhcccCCCCccEEEccCCCCcccCCccccccc---cccccEEEccCccccC
Q 002021 295 N-----LRNLSWLVLSDNYLTSSTQELSFLSSLSNCKFLKYFDLSYNPLYRILPRTTVGNL---SHSLEEFKMSNCNISG 366 (979)
Q Consensus 295 ~-----l~~L~~L~Ls~N~l~~~~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~~l---~~~L~~L~L~~n~i~~ 366 (979)
. .++|++|+|++|+++..... .+...+..+++|++|++++|.+.+.........+ .++|++|++++|.+++
T Consensus 135 ~~l~~~~~~L~~L~L~~n~l~~~~~~-~l~~~l~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~ 213 (461)
T 1z7x_W 135 EGLLDPQCRLEKLQLEYCSLSAASCE-PLASVLRAKPDFKELTVSNNDINEAGVRVLCQGLKDSPCQLEALKLESCGVTS 213 (461)
T ss_dssp HHHTSTTCCCCEEECTTSCCBGGGHH-HHHHHHHHCTTCCEEECCSSBCHHHHHHHHHHHHHHSCCCCCEEECTTSCCBT
T ss_pred HHHhcCCCcceEEECCCCCCCHHHHH-HHHHHHhhCCCCCEEECcCCCcchHHHHHHHHHHhcCCCCceEEEccCCCCcH
Confidence 1 23444445544444432211 0112233445555555555554332211111100 1245555555555544
Q ss_pred C----CCccccCCCcccEEEecCCCCCchhHH-----hhhcCCCCcEEEecCcccCCC----ccccccCCCCCceEecCC
Q 002021 367 G----IPEEISNLTNLRTIYLGGNKLNGSILI-----TLSKLQKLQDLGLKDNKLEGS----IPYDICNLAELYRLDLDG 433 (979)
Q Consensus 367 ~----~p~~l~~l~~L~~L~L~~N~l~~~~~~-----~l~~l~~L~~L~L~~N~l~~~----~p~~~~~l~~L~~L~Ls~ 433 (979)
. ++..+..+++|++|++++|++++.... .+..+++|++|++++|.+++. ++..+..+++|++|++++
T Consensus 214 ~~~~~l~~~l~~~~~L~~L~Ls~n~l~~~~~~~l~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~ 293 (461)
T 1z7x_W 214 DNCRDLCGIVASKASLRELALGSNKLGDVGMAELCPGLLHPSSRLRTLWIWECGITAKGCGDLCRVLRAKESLKELSLAG 293 (461)
T ss_dssp THHHHHHHHHHHCTTCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCCHHHHHHHHHHHHHCTTCCEEECTT
T ss_pred HHHHHHHHHHHhCCCccEEeccCCcCChHHHHHHHHHHhcCCCCceEEECcCCCCCHHHHHHHHHHHhhCCCcceEECCC
Confidence 2 345555666777777777766554322 222456666666666666542 344555566666666666
Q ss_pred CcccccCCccccC-----CCcCceEecCCCcccc-----ccccccCcCCCcEEEeccccccCCCcccccc-----ccccc
Q 002021 434 NKLSGSIPACFSN-----LTSLRIVSLGSNELTS-----IPLTFWNLKDILNLNFSSNFLTGSLPLEIGS-----LKVLV 498 (979)
Q Consensus 434 N~l~~~~~~~~~~-----l~~L~~L~L~~N~l~~-----lp~~~~~l~~L~~L~ls~N~l~~~~p~~~~~-----l~~L~ 498 (979)
|.+.+..+..+.. .++|++|++++|.++. ++..+..+++|+.|++++|.+++..+..+.. .++|+
T Consensus 294 n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~ 373 (461)
T 1z7x_W 294 NELGDEGARLLCETLLEPGCQLESLWVKSCSFTAACCSHFSSVLAQNRFLLELQISNNRLEDAGVRELCQGLGQPGSVLR 373 (461)
T ss_dssp CCCHHHHHHHHHHHHTSTTCCCCEEECTTSCCBGGGHHHHHHHHHHCSSCCEEECCSSBCHHHHHHHHHHHHTSTTCCCC
T ss_pred CCCchHHHHHHHHHhccCCccceeeEcCCCCCchHHHHHHHHHHhhCCCccEEEccCCccccccHHHHHHHHcCCCCceE
Confidence 6665433333322 2455555555555553 2333444444555555555444332222221 33444
Q ss_pred eEeccCCccCc----ccchhhcCCcccceeecCCcccc
Q 002021 499 GIDLSRNNFSG----VIPTEIGGLKNLEYLFLGYNRLQ 532 (979)
Q Consensus 499 ~L~Ls~N~l~~----~~p~~~~~l~~L~~L~Ls~N~l~ 532 (979)
.|+|++|++++ .+|..+..+++|++|+|++|+++
T Consensus 374 ~L~L~~n~i~~~~~~~l~~~l~~~~~L~~L~l~~N~i~ 411 (461)
T 1z7x_W 374 VLWLADCDVSDSSCSSLAATLLANHSLRELDLSNNCLG 411 (461)
T ss_dssp EEECTTSCCCHHHHHHHHHHHHHCCCCCEEECCSSSCC
T ss_pred EEECCCCCCChhhHHHHHHHHHhCCCccEEECCCCCCC
Confidence 44444444443 34444444444444444444444
No 297
>2ft3_A Biglycan; proteoglycan, dimer interface, structural protein, signaling; HET: NAG FLC; 3.40A {Bos taurus}
Probab=100.00 E-value=5.6e-32 Score=300.65 Aligned_cols=268 Identities=25% Similarity=0.279 Sum_probs=146.9
Q ss_pred CCcCEEEccCCccccccCcccccCCCCcEEeccccccccccCccccccccccceeccccccccccchhhhhhcccCCCCc
Q 002021 249 PNLEILSLWGNNFSGTIPRFIFNASKLSILDLEGNSFSGFIPNTFGNLRNLSWLVLSDNYLTSSTQELSFLSSLSNCKFL 328 (979)
Q Consensus 249 ~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~l~~l~~L 328 (979)
++|++|+|++|++++..|..+.++++|++|+|++|++++..|..|+++++|++|+|++|+++.++..
T Consensus 54 ~~l~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~------------- 120 (332)
T 2ft3_A 54 PDTTLLDLQNNDISELRKDDFKGLQHLYALVLVNNKISKIHEKAFSPLRKLQKLYISKNHLVEIPPN------------- 120 (332)
T ss_dssp TTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECGGGSTTCTTCCEEECCSSCCCSCCSS-------------
T ss_pred CCCeEEECCCCcCCccCHhHhhCCCCCcEEECCCCccCccCHhHhhCcCCCCEEECCCCcCCccCcc-------------
Confidence 4555555555555555555555555666666666665555555555555555555555555443321
Q ss_pred cEEEccCCCCcccCCccccccccccccEEEccCccccCCCCccccCCCcccEEEecCCCCCc--hhHHhhhcCCCCcEEE
Q 002021 329 KYFDLSYNPLYRILPRTTVGNLSHSLEEFKMSNCNISGGIPEEISNLTNLRTIYLGGNKLNG--SILITLSKLQKLQDLG 406 (979)
Q Consensus 329 ~~L~Ls~N~l~~~~~~~~~~~l~~~L~~L~L~~n~i~~~~p~~l~~l~~L~~L~L~~N~l~~--~~~~~l~~l~~L~~L~ 406 (979)
. .++|++|++++|++++..+..|..+++|++|++++|.++. ..+..+..+ +|+.|+
T Consensus 121 ----------------~-----~~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l-~L~~L~ 178 (332)
T 2ft3_A 121 ----------------L-----PSSLVELRIHDNRIRKVPKGVFSGLRNMNCIEMGGNPLENSGFEPGAFDGL-KLNYLR 178 (332)
T ss_dssp ----------------C-----CTTCCEEECCSSCCCCCCSGGGSSCSSCCEEECCSCCCBGGGSCTTSSCSC-CCSCCB
T ss_pred ----------------c-----cccCCEEECCCCccCccCHhHhCCCccCCEEECCCCccccCCCCcccccCC-ccCEEE
Confidence 1 1356666666666665555667777777777777777753 334444444 555555
Q ss_pred ecCcccCCCccccccCCCCCceEecCCCcccccCCccccCCCcCceEecCCCccccccccccCcCCCcEEEeccccccCC
Q 002021 407 LKDNKLEGSIPYDICNLAELYRLDLDGNKLSGSIPACFSNLTSLRIVSLGSNELTSIPLTFWNLKDILNLNFSSNFLTGS 486 (979)
Q Consensus 407 L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~lp~~~~~l~~L~~L~ls~N~l~~~ 486 (979)
+++|++++ +|..+. ++|++|++++|++++..+..|..+ ++|+.|++++|++++.
T Consensus 179 l~~n~l~~-l~~~~~--~~L~~L~l~~n~i~~~~~~~l~~l-----------------------~~L~~L~L~~N~l~~~ 232 (332)
T 2ft3_A 179 ISEAKLTG-IPKDLP--ETLNELHLDHNKIQAIELEDLLRY-----------------------SKLYRLGLGHNQIRMI 232 (332)
T ss_dssp CCSSBCSS-CCSSSC--SSCSCCBCCSSCCCCCCTTSSTTC-----------------------TTCSCCBCCSSCCCCC
T ss_pred CcCCCCCc-cCcccc--CCCCEEECCCCcCCccCHHHhcCC-----------------------CCCCEEECCCCcCCcC
Confidence 55555543 332222 344445555555544444444444 4444444445555444
Q ss_pred CccccccccccceEeccCCccCcccchhhcCCcccceeecCCccccCCCCCcccc------ccccccccccccccc--cc
Q 002021 487 LPLEIGSLKVLVGIDLSRNNFSGVIPTEIGGLKNLEYLFLGYNRLQGSIPNSFGD------LISLKFLNLSNNNLS--GV 558 (979)
Q Consensus 487 ~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~------l~~L~~L~Ls~N~l~--~~ 558 (979)
.+..+..+++|+.|+|++|+++ .+|..+..+++|+.|++++|++++..+..|.. ..+|+.|++++|.+. +.
T Consensus 233 ~~~~~~~l~~L~~L~L~~N~l~-~lp~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~~~~~~~~~l~~L~l~~N~~~~~~~ 311 (332)
T 2ft3_A 233 ENGSLSFLPTLRELHLDNNKLS-RVPAGLPDLKLLQVVYLHTNNITKVGVNDFCPVGFGVKRAYYNGISLFNNPVPYWEV 311 (332)
T ss_dssp CTTGGGGCTTCCEEECCSSCCC-BCCTTGGGCTTCCEEECCSSCCCBCCTTSSSCSSCCSSSCCBSEEECCSSSSCGGGS
T ss_pred ChhHhhCCCCCCEEECCCCcCe-ecChhhhcCccCCEEECCCCCCCccChhHccccccccccccccceEeecCccccccc
Confidence 4445555555666666666655 44555666666666666666666554454443 245666777777665 55
Q ss_pred CCccccCccccCeEeccCCc
Q 002021 559 IPASLEKLSYLEDLNLSFNQ 578 (979)
Q Consensus 559 ~p~~~~~l~~L~~L~L~~N~ 578 (979)
.|..|..+++|+.+++++|+
T Consensus 312 ~~~~~~~l~~L~~l~l~~n~ 331 (332)
T 2ft3_A 312 QPATFRCVTDRLAIQFGNYK 331 (332)
T ss_dssp CGGGGTTBCCSTTEEC----
T ss_pred Ccccccccchhhhhhccccc
Confidence 66667777777777777664
No 298
>1xku_A Decorin; proteoglycan, leucine-rich repeat, structural protein; HET: NAG; 2.15A {Bos taurus} SCOP: c.10.2.7 PDB: 1xec_A* 1xcd_A*
Probab=99.98 E-value=1.2e-31 Score=297.86 Aligned_cols=269 Identities=22% Similarity=0.285 Sum_probs=145.4
Q ss_pred CCcCEEEccCCccccccCcccccCCCCcEEeccccccccccCccccccccccceeccccccccccchhhhhhcccCCCCc
Q 002021 249 PNLEILSLWGNNFSGTIPRFIFNASKLSILDLEGNSFSGFIPNTFGNLRNLSWLVLSDNYLTSSTQELSFLSSLSNCKFL 328 (979)
Q Consensus 249 ~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~l~~l~~L 328 (979)
++|++|+|++|++++..+..+.++++|++|+|++|++++..|..|+++++|++|+|++|+++.++...
T Consensus 52 ~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~l~~~~------------ 119 (330)
T 1xku_A 52 PDTALLDLQNNKITEIKDGDFKNLKNLHTLILINNKISKISPGAFAPLVKLERLYLSKNQLKELPEKM------------ 119 (330)
T ss_dssp TTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSSCCSBCCSSC------------
T ss_pred CCCeEEECCCCcCCEeChhhhccCCCCCEEECCCCcCCeeCHHHhcCCCCCCEEECCCCcCCccChhh------------
Confidence 45566666666666555555666666666666666666555666666666666666555555433211
Q ss_pred cEEEccCCCCcccCCccccccccccccEEEccCccccCCCCccccCCCcccEEEecCCCCCc--hhHHhhhcCCCCcEEE
Q 002021 329 KYFDLSYNPLYRILPRTTVGNLSHSLEEFKMSNCNISGGIPEEISNLTNLRTIYLGGNKLNG--SILITLSKLQKLQDLG 406 (979)
Q Consensus 329 ~~L~Ls~N~l~~~~~~~~~~~l~~~L~~L~L~~n~i~~~~p~~l~~l~~L~~L~L~~N~l~~--~~~~~l~~l~~L~~L~ 406 (979)
.++|++|++++|.+++..+..+..+++|++|++++|.++. ..+..+..+++|+.|+
T Consensus 120 ----------------------~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l~~L~~L~ 177 (330)
T 1xku_A 120 ----------------------PKTLQELRVHENEITKVRKSVFNGLNQMIVVELGTNPLKSSGIENGAFQGMKKLSYIR 177 (330)
T ss_dssp ----------------------CTTCCEEECCSSCCCBBCHHHHTTCTTCCEEECCSSCCCGGGBCTTGGGGCTTCCEEE
T ss_pred ----------------------cccccEEECCCCcccccCHhHhcCCccccEEECCCCcCCccCcChhhccCCCCcCEEE
Confidence 1345555555555555555556666666666666666643 3444555555555555
Q ss_pred ecCcccCCCccccccCCCCCceEecCCCcccccCCccccCCCcCceEecCCCccccccccccCcCCCcEEEeccccccCC
Q 002021 407 LKDNKLEGSIPYDICNLAELYRLDLDGNKLSGSIPACFSNLTSLRIVSLGSNELTSIPLTFWNLKDILNLNFSSNFLTGS 486 (979)
Q Consensus 407 L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~lp~~~~~l~~L~~L~ls~N~l~~~ 486 (979)
+++|.++. +|..+. ++|++|++++|++++..+..|..+++|++|++++|+++ +.
T Consensus 178 l~~n~l~~-l~~~~~--~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~-----------------------~~ 231 (330)
T 1xku_A 178 IADTNITT-IPQGLP--PSLTELHLDGNKITKVDAASLKGLNNLAKLGLSFNSIS-----------------------AV 231 (330)
T ss_dssp CCSSCCCS-CCSSCC--TTCSEEECTTSCCCEECTGGGTTCTTCCEEECCSSCCC-----------------------EE
T ss_pred CCCCcccc-CCcccc--ccCCEEECCCCcCCccCHHHhcCCCCCCEEECCCCcCc-----------------------ee
Confidence 55555553 333222 44555555555555444445555555555555555444 43
Q ss_pred CccccccccccceEeccCCccCcccchhhcCCcccceeecCCccccCCCCCcccc------cccccccccccccccc--c
Q 002021 487 LPLEIGSLKVLVGIDLSRNNFSGVIPTEIGGLKNLEYLFLGYNRLQGSIPNSFGD------LISLKFLNLSNNNLSG--V 558 (979)
Q Consensus 487 ~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~------l~~L~~L~Ls~N~l~~--~ 558 (979)
.+..+..+++|+.|+|++|+++ .+|..+..+++|++|+|++|+|++..+..|.. .+.|+.|++++|.+.. +
T Consensus 232 ~~~~~~~l~~L~~L~L~~N~l~-~lp~~l~~l~~L~~L~l~~N~i~~~~~~~f~~~~~~~~~~~l~~l~l~~N~~~~~~i 310 (330)
T 1xku_A 232 DNGSLANTPHLRELHLNNNKLV-KVPGGLADHKYIQVVYLHNNNISAIGSNDFCPPGYNTKKASYSGVSLFSNPVQYWEI 310 (330)
T ss_dssp CTTTGGGSTTCCEEECCSSCCS-SCCTTTTTCSSCCEEECCSSCCCCCCTTSSSCSSCCTTSCCCSEEECCSSSSCGGGS
T ss_pred ChhhccCCCCCCEEECCCCcCc-cCChhhccCCCcCEEECCCCcCCccChhhcCCcccccccccccceEeecCccccccc
Confidence 3444444555555555555555 44455555555555555555555444444432 2556666666666642 4
Q ss_pred CCccccCccccCeEeccCCc
Q 002021 559 IPASLEKLSYLEDLNLSFNQ 578 (979)
Q Consensus 559 ~p~~~~~l~~L~~L~L~~N~ 578 (979)
.|..|..+.+++.++|++|+
T Consensus 311 ~~~~f~~~~~l~~l~L~~N~ 330 (330)
T 1xku_A 311 QPSTFRCVYVRAAVQLGNYK 330 (330)
T ss_dssp CGGGGTTCCCGGGEEC----
T ss_pred CccccccccceeEEEecccC
Confidence 45666666777777776664
No 299
>1z7x_W Ribonuclease inhibitor; leucine-rich repeat, enzyme- inhibitor complex, structural genomics, protein structure initiative, PSI, CESG; HET: CIT; 1.95A {Homo sapiens} SCOP: c.10.1.1 PDB: 2q4g_W* 2bex_A 1a4y_A 2bnh_A 1dfj_I
Probab=99.98 E-value=7.3e-35 Score=339.84 Aligned_cols=360 Identities=20% Similarity=0.206 Sum_probs=215.0
Q ss_pred CCCCceecCCCeeeecCCcc-ccccCccceeeccCCCCcCCC---cccccCCCCCcCEEEccCCccccccCcccc-cCC-
Q 002021 200 RNLEKLDIGDNKLVGIAPIA-IFNVSTLKILGLQDNSLSGCL---SSIGYARLPNLEILSLWGNNFSGTIPRFIF-NAS- 273 (979)
Q Consensus 200 ~~L~~L~Ls~N~l~~~~p~~-l~~l~~L~~L~L~~N~l~~~~---~~~~~~~l~~L~~L~L~~N~l~~~~p~~l~-~l~- 273 (979)
++|++|||++|+++...... +..+++|+.|+|++|.+++.. ....+..+++|++|+|++|.+++..+..+. .++
T Consensus 3 ~~l~~L~Ls~~~l~~~~~~~~~~~~~~L~~L~L~~~~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~ 82 (461)
T 1z7x_W 3 LDIQSLDIQCEELSDARWAELLPLLQQCQVVRLDDCGLTEARCKDISSALRVNPALAELNLRSNELGDVGVHCVLQGLQT 82 (461)
T ss_dssp EEEEEEEEESCCCCHHHHHHHHHHHTTCSEEEEESSCCCHHHHHHHHHHHHTCTTCCEEECTTCCCHHHHHHHHHHTTCS
T ss_pred ccceehhhhhcccCchhHHHHHhhcCCccEEEccCCCCCHHHHHHHHHHHHhCCCcCEEeCCCCcCChHHHHHHHHHHhh
Confidence 56778888888877654333 566777777777777776421 122355667777777777777654333332 233
Q ss_pred ---CCcEEecccccccc----ccCccccccccccceeccccccccccchhhhhhc-ccCCCCccEEEccCCCCcccCCcc
Q 002021 274 ---KLSILDLEGNSFSG----FIPNTFGNLRNLSWLVLSDNYLTSSTQELSFLSS-LSNCKFLKYFDLSYNPLYRILPRT 345 (979)
Q Consensus 274 ---~L~~L~Ls~N~l~~----~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~-l~~l~~L~~L~Ls~N~l~~~~~~~ 345 (979)
+|++|+|++|+++. .++..|..+++|++|+|++|.++...... +... ...+++|++|++++|++......
T Consensus 83 ~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~~~~-l~~~l~~~~~~L~~L~L~~n~l~~~~~~- 160 (461)
T 1z7x_W 83 PSCKIQKLSLQNCCLTGAGCGVLSSTLRTLPTLQELHLSDNLLGDAGLQL-LCEGLLDPQCRLEKLQLEYCSLSAASCE- 160 (461)
T ss_dssp TTCCCCEEECTTSCCBGGGHHHHHHHTTSCTTCCEEECCSSBCHHHHHHH-HHHHHTSTTCCCCEEECTTSCCBGGGHH-
T ss_pred CCCceeEEEccCCCCCHHHHHHHHHHHccCCceeEEECCCCcCchHHHHH-HHHHHhcCCCcceEEECCCCCCCHHHHH-
Confidence 57777777777663 34566666666666776666665432211 0111 12234455555555554432111
Q ss_pred ccccccccccEEEccCccccCCCCccccCCCcccEEEecCCCCCchhHHhhh-----cCCCCcEEEecCcccCCC----c
Q 002021 346 TVGNLSHSLEEFKMSNCNISGGIPEEISNLTNLRTIYLGGNKLNGSILITLS-----KLQKLQDLGLKDNKLEGS----I 416 (979)
Q Consensus 346 ~~~~l~~~L~~L~L~~n~i~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~l~-----~l~~L~~L~L~~N~l~~~----~ 416 (979)
.++..+..+++|++|++++|.+++..+..+. ..++|++|++++|.+++. +
T Consensus 161 ---------------------~l~~~l~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~l 219 (461)
T 1z7x_W 161 ---------------------PLASVLRAKPDFKELTVSNNDINEAGVRVLCQGLKDSPCQLEALKLESCGVTSDNCRDL 219 (461)
T ss_dssp ---------------------HHHHHHHHCTTCCEEECCSSBCHHHHHHHHHHHHHHSCCCCCEEECTTSCCBTTHHHHH
T ss_pred ---------------------HHHHHHhhCCCCCEEECcCCCcchHHHHHHHHHHhcCCCCceEEEccCCCCcHHHHHHH
Confidence 1234455566677777777766655444443 255677777777766653 3
Q ss_pred cccccCCCCCceEecCCCcccccC-----CccccCCCcCceEecCCCcccc-----ccccccCcCCCcEEEeccccccCC
Q 002021 417 PYDICNLAELYRLDLDGNKLSGSI-----PACFSNLTSLRIVSLGSNELTS-----IPLTFWNLKDILNLNFSSNFLTGS 486 (979)
Q Consensus 417 p~~~~~l~~L~~L~Ls~N~l~~~~-----~~~~~~l~~L~~L~L~~N~l~~-----lp~~~~~l~~L~~L~ls~N~l~~~ 486 (979)
+..+..+++|++|++++|++.+.. +..+..+++|++|++++|+++. ++..+..+++|+.|++++|.+++.
T Consensus 220 ~~~l~~~~~L~~L~Ls~n~l~~~~~~~l~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~ 299 (461)
T 1z7x_W 220 CGIVASKASLRELALGSNKLGDVGMAELCPGLLHPSSRLRTLWIWECGITAKGCGDLCRVLRAKESLKELSLAGNELGDE 299 (461)
T ss_dssp HHHHHHCTTCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCCHHHHHHHHHHHHHCTTCCEEECTTCCCHHH
T ss_pred HHHHHhCCCccEEeccCCcCChHHHHHHHHHHhcCCCCceEEECcCCCCCHHHHHHHHHHHhhCCCcceEECCCCCCchH
Confidence 555666667777777777665432 2223346667777777777765 555666667777777777776544
Q ss_pred Cccccccc-----cccceEeccCCccCcc----cchhhcCCcccceeecCCccccCCCCCcccc-----ccccccccccc
Q 002021 487 LPLEIGSL-----KVLVGIDLSRNNFSGV----IPTEIGGLKNLEYLFLGYNRLQGSIPNSFGD-----LISLKFLNLSN 552 (979)
Q Consensus 487 ~p~~~~~l-----~~L~~L~Ls~N~l~~~----~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~-----l~~L~~L~Ls~ 552 (979)
.+..+... ++|+.|+|++|.+++. ++..+..+++|++|+|++|++++..+..+.. .++|++|+|++
T Consensus 300 ~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~ 379 (461)
T 1z7x_W 300 GARLLCETLLEPGCQLESLWVKSCSFTAACCSHFSSVLAQNRFLLELQISNNRLEDAGVRELCQGLGQPGSVLRVLWLAD 379 (461)
T ss_dssp HHHHHHHHHTSTTCCCCEEECTTSCCBGGGHHHHHHHHHHCSSCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTT
T ss_pred HHHHHHHHhccCCccceeeEcCCCCCchHHHHHHHHHHhhCCCccEEEccCCccccccHHHHHHHHcCCCCceEEEECCC
Confidence 33333322 4677777777777654 4555666677777777777776544444433 45777777777
Q ss_pred ccccc----cCCccccCccccCeEeccCCccccc
Q 002021 553 NNLSG----VIPASLEKLSYLEDLNLSFNQLEGK 582 (979)
Q Consensus 553 N~l~~----~~p~~~~~l~~L~~L~L~~N~l~~~ 582 (979)
|++++ .+|..+..+++|++|++++|++++.
T Consensus 380 n~i~~~~~~~l~~~l~~~~~L~~L~l~~N~i~~~ 413 (461)
T 1z7x_W 380 CDVSDSSCSSLAATLLANHSLRELDLSNNCLGDA 413 (461)
T ss_dssp SCCCHHHHHHHHHHHHHCCCCCEEECCSSSCCHH
T ss_pred CCCChhhHHHHHHHHHhCCCccEEECCCCCCCHH
Confidence 77765 5666666777777777777777643
No 300
>3ogk_B Coronatine-insensitive protein 1; leucine rich repeat, ubiquitin ligase, SCF, protein binding; HET: OGK; 2.80A {Arabidopsis thaliana} PDB: 3ogl_B* 3ogm_B*
Probab=99.97 E-value=1.1e-33 Score=340.92 Aligned_cols=450 Identities=15% Similarity=0.052 Sum_probs=214.1
Q ss_pred CCccceeEeeCCCCcEEEEEecCCCccccCCCCCcCCCCCCeeeccCCcc---cccCCcccc------------ccCccc
Q 002021 59 VCNWTGVACEVHSQRVTVLNISSLNLTGTIPSQLGNLSSLQSLNLSFNRL---FGSIPSAIF------------TTYTLK 123 (979)
Q Consensus 59 ~c~w~gv~c~~~~~~v~~l~l~~~~l~g~~~~~l~~l~~L~~L~L~~n~~---~~~~p~~~~------------~l~~L~ 123 (979)
|++|+++.+.. . ..+.+.. .....++..+..+++|++|+|+++.. .+.+|..++ .+++|+
T Consensus 41 ck~W~~~~~~~--~--~~l~~~~-~~~~~~~~~~~~~~~L~~L~L~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~L~ 115 (592)
T 3ogk_B 41 CRRWFKIDSET--R--EHVTMAL-CYTATPDRLSRRFPNLRSLKLKGKPRAAMFNLIPENWGGYVTPWVTEISNNLRQLK 115 (592)
T ss_dssp CHHHHHHHHHH--C--CEEEESC-GGGSCHHHHHHHCTTCSEEEEECSCGGGGGTCSCTTSCCBCHHHHHHHHHHCTTCC
T ss_pred hHHHHHhhhcc--c--cEEEEee-ccccChHHHHHhCCCCeEEEecCCcchhhcccccccccccchHHHHHHHhhCCCCC
Confidence 44899985432 1 1222322 23333344567788899999987532 244554443 344444
Q ss_pred EEecccccccccCCccccCC-CCCcEEEccCCccCchhhhhhhccCCcccCCCCccceeeccccc-ccc-cccccccCCC
Q 002021 124 YVCLRGNQLSGTFPSFISNK-SSLQHLDLSSNALSGEIRANICREIPREFGNLPELELMSLAANN-LQG-KIPLKIGNLR 200 (979)
Q Consensus 124 ~L~L~~n~l~~~~p~~l~~l-~~L~~L~Ls~N~l~~~~~~~~~~~ip~~l~~l~~L~~L~L~~N~-l~~-~~p~~~~~l~ 200 (979)
+|+|++|.+++..+..++.. ++ +|++|+|++|. ++. .++....+++
T Consensus 116 ~L~L~~~~i~~~~~~~l~~~~~~-------------------------------~L~~L~L~~~~~~~~~~l~~~~~~~~ 164 (592)
T 3ogk_B 116 SVHFRRMIVSDLDLDRLAKARAD-------------------------------DLETLKLDKCSGFTTDGLLSIVTHCR 164 (592)
T ss_dssp EEEEESCBCCHHHHHHHHHHHGG-------------------------------GCCEEEEESCEEEEHHHHHHHHHHCT
T ss_pred eEEeeccEecHHHHHHHHHhccc-------------------------------cCcEEECcCCCCcCHHHHHHHHhhCC
Confidence 44444444444333333332 11 25555554443 110 1122223455
Q ss_pred CCCceecCCCeeeecCC----ccccccCccceeeccCCCCcCCCc---ccccCCCCCcCEEEccCCccccccCcccccCC
Q 002021 201 NLEKLDIGDNKLVGIAP----IAIFNVSTLKILGLQDNSLSGCLS---SIGYARLPNLEILSLWGNNFSGTIPRFIFNAS 273 (979)
Q Consensus 201 ~L~~L~Ls~N~l~~~~p----~~l~~l~~L~~L~L~~N~l~~~~~---~~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~ 273 (979)
+|++|+|++|.+++... ..+.++++|+.|++++|.+++... ...+..+++|++|+|++|.+.+ +|..+.+++
T Consensus 165 ~L~~L~L~~~~~~~~~~~~l~~~~~~~~~L~~L~L~~n~~~~~~~~~l~~~~~~~~~L~~L~L~~~~~~~-l~~~~~~~~ 243 (592)
T 3ogk_B 165 KIKTLLMEESSFSEKDGKWLHELAQHNTSLEVLNFYMTEFAKISPKDLETIARNCRSLVSVKVGDFEILE-LVGFFKAAA 243 (592)
T ss_dssp TCSEEECTTCEEECCCSHHHHHHHHHCCCCCEEECTTCCCSSCCHHHHHHHHHHCTTCCEEECSSCBGGG-GHHHHHHCT
T ss_pred CCCEEECccccccCcchhHHHHHHhcCCCccEEEeeccCCCccCHHHHHHHHhhCCCCcEEeccCccHHH-HHHHHhhhh
Confidence 56666666665554421 123344555555555555442111 1123345555555555555553 445555555
Q ss_pred CCcEEeccccccc---cccCccccccccccceeccccccccccchhhhhhcccCCCCccEEEccCCCCcccCCccccccc
Q 002021 274 KLSILDLEGNSFS---GFIPNTFGNLRNLSWLVLSDNYLTSSTQELSFLSSLSNCKFLKYFDLSYNPLYRILPRTTVGNL 350 (979)
Q Consensus 274 ~L~~L~Ls~N~l~---~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~~l 350 (979)
+|++|+++.+... ...+..+..+++|+.|+++++....++. .+..+++|++|++++|.+
T Consensus 244 ~L~~L~l~~~~~~~~~~~~~~~l~~~~~L~~L~l~~~~~~~l~~------~~~~~~~L~~L~Ls~~~l------------ 305 (592)
T 3ogk_B 244 NLEEFCGGSLNEDIGMPEKYMNLVFPRKLCRLGLSYMGPNEMPI------LFPFAAQIRKLDLLYALL------------ 305 (592)
T ss_dssp TCCEEEECBCCCCTTCTTSSSCCCCCTTCCEEEETTCCTTTGGG------GGGGGGGCCEEEETTCCC------------
T ss_pred HHHhhcccccccccchHHHHHHhhccccccccCccccchhHHHH------HHhhcCCCcEEecCCCcC------------
Confidence 5665555542221 1122334444455555544432222221 122333444444444432
Q ss_pred cccccEEEccCccccCCCC-ccccCCCcccEEEecCCCCCchhHHhhhcCCCCcEEEecC-----------cccCCCc-c
Q 002021 351 SHSLEEFKMSNCNISGGIP-EEISNLTNLRTIYLGGNKLNGSILITLSKLQKLQDLGLKD-----------NKLEGSI-P 417 (979)
Q Consensus 351 ~~~L~~L~L~~n~i~~~~p-~~l~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~-----------N~l~~~~-p 417 (979)
++... ..+..+++|++|+++++...+..+..+..+++|++|++++ |.+++.. +
T Consensus 306 --------------~~~~~~~~~~~~~~L~~L~L~~~~~~~~l~~~~~~~~~L~~L~L~~g~~~~~~~~~~~~~~~~~~~ 371 (592)
T 3ogk_B 306 --------------ETEDHCTLIQKCPNLEVLETRNVIGDRGLEVLAQYCKQLKRLRIERGADEQGMEDEEGLVSQRGLI 371 (592)
T ss_dssp --------------CHHHHHHHHTTCTTCCEEEEEGGGHHHHHHHHHHHCTTCCEEEEECCCCSSTTSSTTCCCCHHHHH
T ss_pred --------------CHHHHHHHHHhCcCCCEEeccCccCHHHHHHHHHhCCCCCEEEeecCccccccccccCccCHHHHH
Confidence 21111 2234455555555552211222223334455555555552 3333221 1
Q ss_pred ccccCCCCCceEecCCCcccccCCccccC-CCcCceEecC----CCcccccc------ccccCcCCCcEEEeccc--ccc
Q 002021 418 YDICNLAELYRLDLDGNKLSGSIPACFSN-LTSLRIVSLG----SNELTSIP------LTFWNLKDILNLNFSSN--FLT 484 (979)
Q Consensus 418 ~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~-l~~L~~L~L~----~N~l~~lp------~~~~~l~~L~~L~ls~N--~l~ 484 (979)
.....+++|++|+++.|++++..+..+.. +++|+.|+++ .|+++..| ..+..+++|+.|+++.+ .++
T Consensus 372 ~l~~~~~~L~~L~l~~~~l~~~~~~~l~~~~~~L~~L~l~~~~~~n~l~~~p~~~~~~~~~~~~~~L~~L~L~~~~~~l~ 451 (592)
T 3ogk_B 372 ALAQGCQELEYMAVYVSDITNESLESIGTYLKNLCDFRLVLLDREERITDLPLDNGVRSLLIGCKKLRRFAFYLRQGGLT 451 (592)
T ss_dssp HHHHHCTTCSEEEEEESCCCHHHHHHHHHHCCSCCEEEEEECSCCSCCSSCCCHHHHHHHHHHCTTCCEEEEECCGGGCC
T ss_pred HHHhhCccCeEEEeecCCccHHHHHHHHhhCCCCcEEEEeecCCCccccCchHHHHHHHHHHhCCCCCEEEEecCCCCcc
Confidence 11233555555555555555544444443 5556666663 45555432 22445666666666532 244
Q ss_pred CCCcccccc-ccccceEeccCCccCc-ccchhhcCCcccceeecCCccccCC-CCCcccccccccccccccccccccCCc
Q 002021 485 GSLPLEIGS-LKVLVGIDLSRNNFSG-VIPTEIGGLKNLEYLFLGYNRLQGS-IPNSFGDLISLKFLNLSNNNLSGVIPA 561 (979)
Q Consensus 485 ~~~p~~~~~-l~~L~~L~Ls~N~l~~-~~p~~~~~l~~L~~L~Ls~N~l~~~-~p~~~~~l~~L~~L~Ls~N~l~~~~p~ 561 (979)
+..+..++. +++|+.|+|++|++++ .++..+.++++|++|+|++|.+++. ++..+..+++|++|+|++|+++..--.
T Consensus 452 ~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~ls~n~it~~~~~ 531 (592)
T 3ogk_B 452 DLGLSYIGQYSPNVRWMLLGYVGESDEGLMEFSRGCPNLQKLEMRGCCFSERAIAAAVTKLPSLRYLWVQGYRASMTGQD 531 (592)
T ss_dssp HHHHHHHHHSCTTCCEEEECSCCSSHHHHHHHHTCCTTCCEEEEESCCCBHHHHHHHHHHCSSCCEEEEESCBCCTTCTT
T ss_pred HHHHHHHHHhCccceEeeccCCCCCHHHHHHHHhcCcccCeeeccCCCCcHHHHHHHHHhcCccCeeECcCCcCCHHHHH
Confidence 333333332 5667777777777765 2344556677777777777776543 233345667777777777777654222
Q ss_pred cc-cCccccCeEeccCC
Q 002021 562 SL-EKLSYLEDLNLSFN 577 (979)
Q Consensus 562 ~~-~~l~~L~~L~L~~N 577 (979)
.+ ..++.+....+..+
T Consensus 532 ~l~~~~p~l~~~~~~~~ 548 (592)
T 3ogk_B 532 LMQMARPYWNIELIPSR 548 (592)
T ss_dssp GGGGCCTTEEEEEECCC
T ss_pred HHHHhCCCcEEEEecCc
Confidence 22 24555555544443
No 301
>2z80_A TOLL-like receptor 2, variable lymphocyte recepto; TLR2, lipopeptide, innate immunity, glycoprotein, immune RES inflammatory response; HET: NAG; 1.80A {Homo sapiens}
Probab=99.97 E-value=2.6e-30 Score=289.76 Aligned_cols=91 Identities=35% Similarity=0.422 Sum_probs=54.8
Q ss_pred cCCCCCCCccceeEeeCCCCcEEEEEecCCCccccCCCCCcCCCCCCeeeccCCcccccCCccccccCcccEEecccccc
Q 002021 53 WNTSTPVCNWTGVACEVHSQRVTVLNISSLNLTGTIPSQLGNLSSLQSLNLSFNRLFGSIPSAIFTTYTLKYVCLRGNQL 132 (979)
Q Consensus 53 w~~~~~~c~w~gv~c~~~~~~v~~l~l~~~~l~g~~~~~l~~l~~L~~L~L~~n~~~~~~p~~~~~l~~L~~L~L~~n~l 132 (979)
|.....+|.|.|+ |+ +++++++ .+|..+. ++|++|+|++|++++..+..+..+++|++|+|++|++
T Consensus 23 ~~~~~~~C~~~~~-c~----------~~~~~l~-~iP~~~~--~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l 88 (353)
T 2z80_A 23 SNQASLSCDRNGI-CK----------GSSGSLN-SIPSGLT--EAVKSLDLSNNRITYISNSDLQRCVNLQALVLTSNGI 88 (353)
T ss_dssp ----CCEECTTSE-EE----------CCSTTCS-SCCTTCC--TTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCC
T ss_pred CCccCCCCCCCeE-ee----------CCCCCcc-ccccccc--ccCcEEECCCCcCcccCHHHhccCCCCCEEECCCCcc
Confidence 4445567999998 75 4566666 4565543 4677777777777654444566666666666666666
Q ss_pred cccCCccccCCCCCcEEEccCCccC
Q 002021 133 SGTFPSFISNKSSLQHLDLSSNALS 157 (979)
Q Consensus 133 ~~~~p~~l~~l~~L~~L~Ls~N~l~ 157 (979)
++..|..++++++|++|||++|.++
T Consensus 89 ~~~~~~~~~~l~~L~~L~Ls~n~l~ 113 (353)
T 2z80_A 89 NTIEEDSFSSLGSLEHLDLSYNYLS 113 (353)
T ss_dssp CEECTTTTTTCTTCCEEECCSSCCS
T ss_pred CccCHhhcCCCCCCCEEECCCCcCC
Confidence 6555555555555555555555554
No 302
>2z66_A Variable lymphocyte receptor B, TOLL-like recepto; TLR4, TOLL-like receptor, MD-2, LPS, leucine-rich repeat, glycoprotein, immune response; HET: NAG BMA FUL; 1.90A {Eptatretus burgeri}
Probab=99.97 E-value=2.9e-30 Score=283.37 Aligned_cols=252 Identities=25% Similarity=0.270 Sum_probs=160.6
Q ss_pred CccceeEeeCCCCcEEEEEecCCCccccCCCCCcCCCCCCeeeccCCcccccCCccccccCcccEEecccccccc--cCC
Q 002021 60 CNWTGVACEVHSQRVTVLNISSLNLTGTIPSQLGNLSSLQSLNLSFNRLFGSIPSAIFTTYTLKYVCLRGNQLSG--TFP 137 (979)
Q Consensus 60 c~w~gv~c~~~~~~v~~l~l~~~~l~g~~~~~l~~l~~L~~L~L~~n~~~~~~p~~~~~l~~L~~L~L~~n~l~~--~~p 137 (979)
|.|.+|.|+. ++++ .+|..+. ++|++|+|++|+++...+..+..+++|++|+|++|+++. ..|
T Consensus 7 C~~~~l~c~~------------~~l~-~ip~~~~--~~l~~L~L~~n~l~~i~~~~~~~l~~L~~L~L~~n~l~~~~~~~ 71 (306)
T 2z66_A 7 CSGTEIRCNS------------KGLT-SVPTGIP--SSATRLELESNKLQSLPHGVFDKLTQLTKLSLSSNGLSFKGCCS 71 (306)
T ss_dssp EETTEEECCS------------SCCS-SCCSCCC--TTCCEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCEEEEEE
T ss_pred eCCCEEEcCC------------CCcc-cCCCCCC--CCCCEEECCCCccCccCHhHhhccccCCEEECCCCccCcccCcc
Confidence 8999998863 2344 3454332 577777777777773333345677777777777777763 235
Q ss_pred ccccCCCCCcEEEccCCccCchhhhhhhccCCcccCCCCccceeeccccccccccc-ccccCCCCCCceecCCCeeeecC
Q 002021 138 SFISNKSSLQHLDLSSNALSGEIRANICREIPREFGNLPELELMSLAANNLQGKIP-LKIGNLRNLEKLDIGDNKLVGIA 216 (979)
Q Consensus 138 ~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~~ip~~l~~l~~L~~L~L~~N~l~~~~p-~~~~~l~~L~~L~Ls~N~l~~~~ 216 (979)
..+..+++|++|+|++|.++ .+|..+.++++|++|++++|++++..+ ..+..+++|++|++++|++.+..
T Consensus 72 ~~~~~~~~L~~L~Ls~n~i~---------~l~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~ 142 (306)
T 2z66_A 72 QSDFGTTSLKYLDLSFNGVI---------TMSSNFLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAF 142 (306)
T ss_dssp HHHHSCSCCCEEECCSCSEE---------EEEEEEETCTTCCEEECTTSEEESSTTTTTTTTCTTCCEEECTTSCCEECS
T ss_pred cccccccccCEEECCCCccc---------cChhhcCCCCCCCEEECCCCcccccccchhhhhccCCCEEECCCCcCCccc
Confidence 56666777777777777765 256667777777777777777765544 46677777777777777777776
Q ss_pred CccccccCccceeeccCCCCcCCCcccccCCCCCcCEEEccCCccccccCcccccCCCCcEEeccccccccccCcccccc
Q 002021 217 PIAIFNVSTLKILGLQDNSLSGCLSSIGYARLPNLEILSLWGNNFSGTIPRFIFNASKLSILDLEGNSFSGFIPNTFGNL 296 (979)
Q Consensus 217 p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l 296 (979)
+..+.++++|+.|++++|.+++......+..+++|++|+|++|++++..|..+..+++|++|+|++|++++..+..|..+
T Consensus 143 ~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l 222 (306)
T 2z66_A 143 NGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMSHNNFFSLDTFPYKCL 222 (306)
T ss_dssp TTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCSBCCSGGGTTC
T ss_pred hhhcccCcCCCEEECCCCccccccchhHHhhCcCCCEEECCCCCcCCcCHHHhcCCCCCCEEECCCCccCccChhhccCc
Confidence 66666666666666666666552222345566666666666666666556666666666666666666666555556666
Q ss_pred ccccceeccccccccccchhhhhhcccCC-CCccEEEccCCCCcc
Q 002021 297 RNLSWLVLSDNYLTSSTQELSFLSSLSNC-KFLKYFDLSYNPLYR 340 (979)
Q Consensus 297 ~~L~~L~Ls~N~l~~~~~~~~~~~~l~~l-~~L~~L~Ls~N~l~~ 340 (979)
++|++|+|++|++++.... .+..+ ++|++|++++|++..
T Consensus 223 ~~L~~L~L~~N~l~~~~~~-----~~~~~~~~L~~L~L~~N~~~~ 262 (306)
T 2z66_A 223 NSLQVLDYSLNHIMTSKKQ-----ELQHFPSSLAFLNLTQNDFAC 262 (306)
T ss_dssp TTCCEEECTTSCCCBCSSS-----SCCCCCTTCCEEECTTCCEEC
T ss_pred ccCCEeECCCCCCcccCHH-----HHHhhhccCCEEEccCCCeec
Confidence 6666666666666554332 23444 255566666555543
No 303
>3g06_A SSPH2 (leucine-rich repeat protein); E3 ubiquitin ligase, leucine rich repeat domain, type three effector, salmonella virulence factor; 1.90A {Salmonella typhimurium}
Probab=99.96 E-value=1.4e-29 Score=300.84 Aligned_cols=290 Identities=27% Similarity=0.328 Sum_probs=192.5
Q ss_pred CccccccCCCCCCCccceeEee------CCCCcEEEEEecCCCccccCCCCCcCCCCCCeeeccCCcccccCCccccccC
Q 002021 47 NFLAKNWNTSTPVCNWTGVACE------VHSQRVTVLNISSLNLTGTIPSQLGNLSSLQSLNLSFNRLFGSIPSAIFTTY 120 (979)
Q Consensus 47 ~~~~~~w~~~~~~c~w~gv~c~------~~~~~v~~l~l~~~~l~g~~~~~l~~l~~L~~L~L~~n~~~~~~p~~~~~l~ 120 (979)
..+ +.|..+.+||.|.|..|. +....++.|++++|+|+ .+|..+. ++|++|+|++|+++ .+|. .++
T Consensus 10 ~~w-~~W~~~~~~~~~~~r~~~~~~~~~c~~~~l~~L~ls~n~L~-~lp~~l~--~~L~~L~L~~N~l~-~lp~---~l~ 81 (622)
T 3g06_A 10 AVW-SAWRRAAPAEESRGRAAVVQKMRACLNNGNAVLNVGESGLT-TLPDCLP--AHITTLVIPDNNLT-SLPA---LPP 81 (622)
T ss_dssp CHH-HHHHHTCCGGGHHHHHHHHHHHHHHHHHCCCEEECCSSCCS-CCCSCCC--TTCSEEEECSCCCS-CCCC---CCT
T ss_pred HHH-HHHHhcCCcchhccccccCcccccccCCCCcEEEecCCCcC-ccChhhC--CCCcEEEecCCCCC-CCCC---cCC
Confidence 344 579888889999775432 22335788999999998 7787776 89999999999988 5776 567
Q ss_pred cccEEecccccccccCCccccCCCCCcEEEccCCccCchhhhhhhccCCcccCCCCccceeecccccccccccccccCCC
Q 002021 121 TLKYVCLRGNQLSGTFPSFISNKSSLQHLDLSSNALSGEIRANICREIPREFGNLPELELMSLAANNLQGKIPLKIGNLR 200 (979)
Q Consensus 121 ~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~~ip~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~ 200 (979)
+|++|+|++|++++ +|. .+++|++|+|++|.+++ +|. .+++|+.|++++|++++ +|.. ++
T Consensus 82 ~L~~L~Ls~N~l~~-lp~---~l~~L~~L~Ls~N~l~~---------l~~---~l~~L~~L~L~~N~l~~-lp~~---l~ 141 (622)
T 3g06_A 82 ELRTLEVSGNQLTS-LPV---LPPGLLELSIFSNPLTH---------LPA---LPSGLCKLWIFGNQLTS-LPVL---PP 141 (622)
T ss_dssp TCCEEEECSCCCSC-CCC---CCTTCCEEEECSCCCCC---------CCC---CCTTCCEEECCSSCCSC-CCCC---CT
T ss_pred CCCEEEcCCCcCCc-CCC---CCCCCCEEECcCCcCCC---------CCC---CCCCcCEEECCCCCCCc-CCCC---CC
Confidence 88999999998884 555 67888899999888874 455 56778888888888874 4543 47
Q ss_pred CCCceecCCCeeeecCCccccccCccceeeccCCCCcCCCcccccCCCCCcCEEEccCCccccccCcccccCCCCcEEec
Q 002021 201 NLEKLDIGDNKLVGIAPIAIFNVSTLKILGLQDNSLSGCLSSIGYARLPNLEILSLWGNNFSGTIPRFIFNASKLSILDL 280 (979)
Q Consensus 201 ~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L 280 (979)
+|++|+|++|+++++.+ .+++|+.|++++|.|++++ ..+++|+.|+|++|++++ +|.. +++|+.|++
T Consensus 142 ~L~~L~Ls~N~l~~l~~----~~~~L~~L~L~~N~l~~l~-----~~~~~L~~L~Ls~N~l~~-l~~~---~~~L~~L~L 208 (622)
T 3g06_A 142 GLQELSVSDNQLASLPA----LPSELCKLWAYNNQLTSLP-----MLPSGLQELSVSDNQLAS-LPTL---PSELYKLWA 208 (622)
T ss_dssp TCCEEECCSSCCSCCCC----CCTTCCEEECCSSCCSCCC-----CCCTTCCEEECCSSCCSC-CCCC---CTTCCEEEC
T ss_pred CCCEEECcCCcCCCcCC----ccCCCCEEECCCCCCCCCc-----ccCCCCcEEECCCCCCCC-CCCc---cchhhEEEC
Confidence 78888888888877532 2456777777777777644 245677777777777764 3332 356777777
Q ss_pred cccccccccCccccccccccceeccccccccccchhhhhhcccCCCCccEEEccCCCCcccCCccccccccccccEEEcc
Q 002021 281 EGNSFSGFIPNTFGNLRNLSWLVLSDNYLTSSTQELSFLSSLSNCKFLKYFDLSYNPLYRILPRTTVGNLSHSLEEFKMS 360 (979)
Q Consensus 281 s~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~~L~~L~L~ 360 (979)
++|.++.. |.. +++|+.|+|++|+|+.++ ..+++|++|++++|++..++. .+++|+.|+|+
T Consensus 209 ~~N~l~~l-~~~---~~~L~~L~Ls~N~L~~lp---------~~l~~L~~L~Ls~N~L~~lp~------~~~~L~~L~Ls 269 (622)
T 3g06_A 209 YNNRLTSL-PAL---PSGLKELIVSGNRLTSLP---------VLPSELKELMVSGNRLTSLPM------LPSGLLSLSVY 269 (622)
T ss_dssp CSSCCSSC-CCC---CTTCCEEECCSSCCSCCC---------CCCTTCCEEECCSSCCSCCCC------CCTTCCEEECC
T ss_pred cCCccccc-CCC---CCCCCEEEccCCccCcCC---------CCCCcCcEEECCCCCCCcCCc------ccccCcEEeCC
Confidence 77777643 322 356666777776666544 123556666666666654432 12345555555
Q ss_pred CccccCCCCccccCCCcccEEEecCCCCCchhHHhhh
Q 002021 361 NCNISGGIPEEISNLTNLRTIYLGGNKLNGSILITLS 397 (979)
Q Consensus 361 ~n~i~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~l~ 397 (979)
+|+|+ .+|..+..+++|+.|+|++|++++..+..+.
T Consensus 270 ~N~L~-~lp~~l~~l~~L~~L~L~~N~l~~~~~~~l~ 305 (622)
T 3g06_A 270 RNQLT-RLPESLIHLSSETTVNLEGNPLSERTLQALR 305 (622)
T ss_dssp SSCCC-SCCGGGGGSCTTCEEECCSCCCCHHHHHHHH
T ss_pred CCCCC-cCCHHHhhccccCEEEecCCCCCCcCHHHHH
Confidence 55555 3444455555555555555555544444443
No 304
>2z66_A Variable lymphocyte receptor B, TOLL-like recepto; TLR4, TOLL-like receptor, MD-2, LPS, leucine-rich repeat, glycoprotein, immune response; HET: NAG BMA FUL; 1.90A {Eptatretus burgeri}
Probab=99.96 E-value=1e-29 Score=278.94 Aligned_cols=273 Identities=19% Similarity=0.193 Sum_probs=230.3
Q ss_pred EEEccCCCCcccCCccccccccccccEEEccCccccCCCCccccCCCcccEEEecCCCCCch--hHHhhhcCCCCcEEEe
Q 002021 330 YFDLSYNPLYRILPRTTVGNLSHSLEEFKMSNCNISGGIPEEISNLTNLRTIYLGGNKLNGS--ILITLSKLQKLQDLGL 407 (979)
Q Consensus 330 ~L~Ls~N~l~~~~~~~~~~~l~~~L~~L~L~~n~i~~~~p~~l~~l~~L~~L~L~~N~l~~~--~~~~l~~l~~L~~L~L 407 (979)
.++++++.++.++.. ++++|++|++++|+++...+..|..+++|++|+|++|+++.. .+..+..+++|++|++
T Consensus 11 ~l~c~~~~l~~ip~~-----~~~~l~~L~L~~n~l~~i~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~~~L~~L~L 85 (306)
T 2z66_A 11 EIRCNSKGLTSVPTG-----IPSSATRLELESNKLQSLPHGVFDKLTQLTKLSLSSNGLSFKGCCSQSDFGTTSLKYLDL 85 (306)
T ss_dssp EEECCSSCCSSCCSC-----CCTTCCEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCEEEEEEHHHHSCSCCCEEEC
T ss_pred EEEcCCCCcccCCCC-----CCCCCCEEECCCCccCccCHhHhhccccCCEEECCCCccCcccCcccccccccccCEEEC
Confidence 455666665555332 235788888888888866666789999999999999999854 3677788999999999
Q ss_pred cCcccCCCccccccCCCCCceEecCCCcccccCC-ccccCCCcCceEecCCCccccc-cccccCcCCCcEEEeccccccC
Q 002021 408 KDNKLEGSIPYDICNLAELYRLDLDGNKLSGSIP-ACFSNLTSLRIVSLGSNELTSI-PLTFWNLKDILNLNFSSNFLTG 485 (979)
Q Consensus 408 ~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~-~~~~~l~~L~~L~L~~N~l~~l-p~~~~~l~~L~~L~ls~N~l~~ 485 (979)
++|.+. .+|..+..+++|++|++++|++++..+ ..+..+++|++|++++|+++.+ |..+..+++|+.|++++|.+++
T Consensus 86 s~n~i~-~l~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~ 164 (306)
T 2z66_A 86 SFNGVI-TMSSNFLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQE 164 (306)
T ss_dssp CSCSEE-EEEEEEETCTTCCEEECTTSEEESSTTTTTTTTCTTCCEEECTTSCCEECSTTTTTTCTTCCEEECTTCEEGG
T ss_pred CCCccc-cChhhcCCCCCCCEEECCCCcccccccchhhhhccCCCEEECCCCcCCccchhhcccCcCCCEEECCCCcccc
Confidence 999998 477789999999999999999997665 6899999999999999999955 5568889999999999999987
Q ss_pred -CCccccccccccceEeccCCccCcccchhhcCCcccceeecCCccccCCCCCcccccccccccccccccccccCCcccc
Q 002021 486 -SLPLEIGSLKVLVGIDLSRNNFSGVIPTEIGGLKNLEYLFLGYNRLQGSIPNSFGDLISLKFLNLSNNNLSGVIPASLE 564 (979)
Q Consensus 486 -~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~ 564 (979)
..|..+..+++|+.|+|++|++++..|..|..+++|+.|+|++|++++..+..+..+++|++|||++|++++..|..+.
T Consensus 165 ~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~ 244 (306)
T 2z66_A 165 NFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMSHNNFFSLDTFPYKCLNSLQVLDYSLNHIMTSKKQELQ 244 (306)
T ss_dssp GEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCSBCCSGGGTTCTTCCEEECTTSCCCBCSSSSCC
T ss_pred ccchhHHhhCcCCCEEECCCCCcCCcCHHHhcCCCCCCEEECCCCccCccChhhccCcccCCEeECCCCCCcccCHHHHH
Confidence 6889999999999999999999998899999999999999999999987777899999999999999999999999999
Q ss_pred Ccc-ccCeEeccCCcccccCCCC---CCCCCcccccccCCccccCCCC
Q 002021 565 KLS-YLEDLNLSFNQLEGKIPRG---GSFGNFSAQSFEGNELLCGSPN 608 (979)
Q Consensus 565 ~l~-~L~~L~L~~N~l~~~~p~~---~~~~~~~~~~~~~N~~~c~~p~ 608 (979)
.++ +|+.|+|++|+++|..+.. .++..........+...|..|.
T Consensus 245 ~~~~~L~~L~L~~N~~~~~c~~~~~~~~l~~~~~~~~~~~~~~C~~p~ 292 (306)
T 2z66_A 245 HFPSSLAFLNLTQNDFACTCEHQSFLQWIKDQRQLLVEVERMECATPS 292 (306)
T ss_dssp CCCTTCCEEECTTCCEECSGGGHHHHHHHHHTGGGBSCGGGCBEEESG
T ss_pred hhhccCCEEEccCCCeecccChHHHHHHHHhhhhhhccccccccCCch
Confidence 985 9999999999999875532 1233334455667778887763
No 305
>3ogk_B Coronatine-insensitive protein 1; leucine rich repeat, ubiquitin ligase, SCF, protein binding; HET: OGK; 2.80A {Arabidopsis thaliana} PDB: 3ogl_B* 3ogm_B*
Probab=99.96 E-value=3.8e-31 Score=318.71 Aligned_cols=413 Identities=15% Similarity=0.109 Sum_probs=264.0
Q ss_pred cCCccccCCCCCcEEEccCCccCchhhhhhhccCCcccC------------CCCccceeecccccccccccccccCC--C
Q 002021 135 TFPSFISNKSSLQHLDLSSNALSGEIRANICREIPREFG------------NLPELELMSLAANNLQGKIPLKIGNL--R 200 (979)
Q Consensus 135 ~~p~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~~ip~~l~------------~l~~L~~L~L~~N~l~~~~p~~~~~l--~ 200 (979)
.++..+..+++|++|+|+++..-.. ...+|..++ .+++|++|+|++|.+++..+..++.. .
T Consensus 64 ~~~~~~~~~~~L~~L~L~~~~~~~~-----~~~~~~~~~~~~~~~l~~l~~~~~~L~~L~L~~~~i~~~~~~~l~~~~~~ 138 (592)
T 3ogk_B 64 TPDRLSRRFPNLRSLKLKGKPRAAM-----FNLIPENWGGYVTPWVTEISNNLRQLKSVHFRRMIVSDLDLDRLAKARAD 138 (592)
T ss_dssp CHHHHHHHCTTCSEEEEECSCGGGG-----GTCSCTTSCCBCHHHHHHHHHHCTTCCEEEEESCBCCHHHHHHHHHHHGG
T ss_pred ChHHHHHhCCCCeEEEecCCcchhh-----cccccccccccchHHHHHHHhhCCCCCeEEeeccEecHHHHHHHHHhccc
Confidence 3344556677788888876532100 012333333 56667777777776665555555543 3
Q ss_pred CCCceecCCCe-eeec-CCccccccCccceeeccCCCCcCCCcc---cccCCCCCcCEEEccCCccc----cccCccccc
Q 002021 201 NLEKLDIGDNK-LVGI-APIAIFNVSTLKILGLQDNSLSGCLSS---IGYARLPNLEILSLWGNNFS----GTIPRFIFN 271 (979)
Q Consensus 201 ~L~~L~Ls~N~-l~~~-~p~~l~~l~~L~~L~L~~N~l~~~~~~---~~~~~l~~L~~L~L~~N~l~----~~~p~~l~~ 271 (979)
+|++|+|++|. ++.. .+....++++|++|+|++|.+++.... ..+..+++|++|++++|.++ +.++..+.+
T Consensus 139 ~L~~L~L~~~~~~~~~~l~~~~~~~~~L~~L~L~~~~~~~~~~~~l~~~~~~~~~L~~L~L~~n~~~~~~~~~l~~~~~~ 218 (592)
T 3ogk_B 139 DLETLKLDKCSGFTTDGLLSIVTHCRKIKTLLMEESSFSEKDGKWLHELAQHNTSLEVLNFYMTEFAKISPKDLETIARN 218 (592)
T ss_dssp GCCEEEEESCEEEEHHHHHHHHHHCTTCSEEECTTCEEECCCSHHHHHHHHHCCCCCEEECTTCCCSSCCHHHHHHHHHH
T ss_pred cCcEEECcCCCCcCHHHHHHHHhhCCCCCEEECccccccCcchhHHHHHHhcCCCccEEEeeccCCCccCHHHHHHHHhh
Confidence 37777777665 2211 111223455666666666655433211 12234555566666555554 233334445
Q ss_pred CCCCcEEeccccccccccCccccccccccceeccccccccccchhhhhhcccCCCCccEEEccCCCCcccCCcccccccc
Q 002021 272 ASKLSILDLEGNSFSGFIPNTFGNLRNLSWLVLSDNYLTSSTQELSFLSSLSNCKFLKYFDLSYNPLYRILPRTTVGNLS 351 (979)
Q Consensus 272 l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~ 351 (979)
+++|++|++++|.+.+ ++..+.++++|+.|+++.+...... ......+..++
T Consensus 219 ~~~L~~L~L~~~~~~~-l~~~~~~~~~L~~L~l~~~~~~~~~--~~~~~~l~~~~------------------------- 270 (592)
T 3ogk_B 219 CRSLVSVKVGDFEILE-LVGFFKAAANLEEFCGGSLNEDIGM--PEKYMNLVFPR------------------------- 270 (592)
T ss_dssp CTTCCEEECSSCBGGG-GHHHHHHCTTCCEEEECBCCCCTTC--TTSSSCCCCCT-------------------------
T ss_pred CCCCcEEeccCccHHH-HHHHHhhhhHHHhhcccccccccch--HHHHHHhhccc-------------------------
Confidence 5555555555555554 3445555555555555532211000 00111233333
Q ss_pred ccccEEEccCccccCCCCccccCCCcccEEEecCCCCCchhH-HhhhcCCCCcEEEecCcccCCCccccccCCCCCceEe
Q 002021 352 HSLEEFKMSNCNISGGIPEEISNLTNLRTIYLGGNKLNGSIL-ITLSKLQKLQDLGLKDNKLEGSIPYDICNLAELYRLD 430 (979)
Q Consensus 352 ~~L~~L~L~~n~i~~~~p~~l~~l~~L~~L~L~~N~l~~~~~-~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ 430 (979)
+|+.|+++++.. +.+|..+..+++|++|+|++|.+++... ..+..+++|+.|+++++...+.++..+..+++|++|+
T Consensus 271 -~L~~L~l~~~~~-~~l~~~~~~~~~L~~L~Ls~~~l~~~~~~~~~~~~~~L~~L~L~~~~~~~~l~~~~~~~~~L~~L~ 348 (592)
T 3ogk_B 271 -KLCRLGLSYMGP-NEMPILFPFAAQIRKLDLLYALLETEDHCTLIQKCPNLEVLETRNVIGDRGLEVLAQYCKQLKRLR 348 (592)
T ss_dssp -TCCEEEETTCCT-TTGGGGGGGGGGCCEEEETTCCCCHHHHHHHHTTCTTCCEEEEEGGGHHHHHHHHHHHCTTCCEEE
T ss_pred -cccccCccccch-hHHHHHHhhcCCCcEEecCCCcCCHHHHHHHHHhCcCCCEEeccCccCHHHHHHHHHhCCCCCEEE
Confidence 455555555422 3567778889999999999999887665 4578999999999994433334444557789999999
Q ss_pred cC-----------CCcccccCC-ccccCCCcCceEecCCCcccc-ccccccC-cCCCcEEEec----cccccCC-----C
Q 002021 431 LD-----------GNKLSGSIP-ACFSNLTSLRIVSLGSNELTS-IPLTFWN-LKDILNLNFS----SNFLTGS-----L 487 (979)
Q Consensus 431 Ls-----------~N~l~~~~~-~~~~~l~~L~~L~L~~N~l~~-lp~~~~~-l~~L~~L~ls----~N~l~~~-----~ 487 (979)
++ .|.+++... ..+..+++|++|+++.|+++. .+..+.. +++|+.|+++ .|.+++. +
T Consensus 349 L~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~L~l~~~~l~~~~~~~l~~~~~~L~~L~l~~~~~~n~l~~~p~~~~~ 428 (592)
T 3ogk_B 349 IERGADEQGMEDEEGLVSQRGLIALAQGCQELEYMAVYVSDITNESLESIGTYLKNLCDFRLVLLDREERITDLPLDNGV 428 (592)
T ss_dssp EECCCCSSTTSSTTCCCCHHHHHHHHHHCTTCSEEEEEESCCCHHHHHHHHHHCCSCCEEEEEECSCCSCCSSCCCHHHH
T ss_pred eecCccccccccccCccCHHHHHHHHhhCccCeEEEeecCCccHHHHHHHHhhCCCCcEEEEeecCCCccccCchHHHHH
Confidence 99 467764422 234568999999999999983 3445554 8899999996 7788864 3
Q ss_pred ccccccccccceEeccCC--ccCcccchhhcC-CcccceeecCCccccC-CCCCccccccccccccccccccccc-CCcc
Q 002021 488 PLEIGSLKVLVGIDLSRN--NFSGVIPTEIGG-LKNLEYLFLGYNRLQG-SIPNSFGDLISLKFLNLSNNNLSGV-IPAS 562 (979)
Q Consensus 488 p~~~~~l~~L~~L~Ls~N--~l~~~~p~~~~~-l~~L~~L~Ls~N~l~~-~~p~~~~~l~~L~~L~Ls~N~l~~~-~p~~ 562 (979)
+..+..+++|+.|+|++| .+++..+..+.. +++|++|+|++|++++ .++..+..+++|++|+|++|.+++. ++..
T Consensus 429 ~~~~~~~~~L~~L~L~~~~~~l~~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~ 508 (592)
T 3ogk_B 429 RSLLIGCKKLRRFAFYLRQGGLTDLGLSYIGQYSPNVRWMLLGYVGESDEGLMEFSRGCPNLQKLEMRGCCFSERAIAAA 508 (592)
T ss_dssp HHHHHHCTTCCEEEEECCGGGCCHHHHHHHHHSCTTCCEEEECSCCSSHHHHHHHHTCCTTCCEEEEESCCCBHHHHHHH
T ss_pred HHHHHhCCCCCEEEEecCCCCccHHHHHHHHHhCccceEeeccCCCCCHHHHHHHHhcCcccCeeeccCCCCcHHHHHHH
Confidence 444677999999999854 477776666654 8999999999999986 3455667899999999999998755 4445
Q ss_pred ccCccccCeEeccCCccccc
Q 002021 563 LEKLSYLEDLNLSFNQLEGK 582 (979)
Q Consensus 563 ~~~l~~L~~L~L~~N~l~~~ 582 (979)
+..+++|+.|+|++|+++..
T Consensus 509 ~~~l~~L~~L~ls~n~it~~ 528 (592)
T 3ogk_B 509 VTKLPSLRYLWVQGYRASMT 528 (592)
T ss_dssp HHHCSSCCEEEEESCBCCTT
T ss_pred HHhcCccCeeECcCCcCCHH
Confidence 56799999999999998764
No 306
>3zyi_A Leucine-rich repeat-containing protein 4; cell adhesion, LRRC4 complex, synapse; HET: NAG; 2.60A {Homo sapiens} PDB: 3zyo_A* 3zyn_A* 2dl9_A
Probab=99.96 E-value=1.2e-28 Score=285.88 Aligned_cols=244 Identities=24% Similarity=0.237 Sum_probs=209.9
Q ss_pred EEecCCCccccCCCCCcCCCCCCeeeccCCcccccCCccccccCcccEEecccccccccCCccccCCCCCcEEEccCCcc
Q 002021 77 LNISSLNLTGTIPSQLGNLSSLQSLNLSFNRLFGSIPSAIFTTYTLKYVCLRGNQLSGTFPSFISNKSSLQHLDLSSNAL 156 (979)
Q Consensus 77 l~l~~~~l~g~~~~~l~~l~~L~~L~L~~n~~~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l 156 (979)
++.++.+++ .+|..+. ++|++|+|++|++++..|..+..+++|++|+|++|++++..|..|.++++|++|+|++|.+
T Consensus 59 v~c~~~~l~-~iP~~~~--~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~n~l 135 (452)
T 3zyi_A 59 VVCTRRGLS-EVPQGIP--SNTRYLNLMENNIQMIQADTFRHLHHLEVLQLGRNSIRQIEVGAFNGLASLNTLELFDNWL 135 (452)
T ss_dssp EECCSSCCS-SCCSCCC--TTCSEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCC
T ss_pred EEECCCCcC-ccCCCCC--CCccEEECcCCcCceECHHHcCCCCCCCEEECCCCccCCcChhhccCcccCCEEECCCCcC
Confidence 444555666 4666554 6899999999999988899999999999999999999988889999999999999999999
Q ss_pred CchhhhhhhccCCcccCCCCccceeecccccccccccccccCCCCCCceecCC-CeeeecCCccccccCccceeeccCCC
Q 002021 157 SGEIRANICREIPREFGNLPELELMSLAANNLQGKIPLKIGNLRNLEKLDIGD-NKLVGIAPIAIFNVSTLKILGLQDNS 235 (979)
Q Consensus 157 ~~~~~~~~~~~ip~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~-N~l~~~~p~~l~~l~~L~~L~L~~N~ 235 (979)
++. .+..|+++++|++|+|++|++++..+..|.++++|++|+|++ |.+..+.+..|.++++|+.|+|++|+
T Consensus 136 ~~~--------~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~~~~l~~i~~~~~~~l~~L~~L~L~~n~ 207 (452)
T 3zyi_A 136 TVI--------PSGAFEYLSKLRELWLRNNPIESIPSYAFNRVPSLMRLDLGELKKLEYISEGAFEGLFNLKYLNLGMCN 207 (452)
T ss_dssp SBC--------CTTTSSSCTTCCEEECCSCCCCEECTTTTTTCTTCCEEECCCCTTCCEECTTTTTTCTTCCEEECTTSC
T ss_pred Ccc--------ChhhhcccCCCCEEECCCCCcceeCHhHHhcCCcccEEeCCCCCCccccChhhccCCCCCCEEECCCCc
Confidence 743 345588999999999999999977777899999999999998 56777777789999999999999999
Q ss_pred CcCCCcccccCCCCCcCEEEccCCccccccCcccccCCCCcEEeccccccccccCccccccccccceeccccccccccch
Q 002021 236 LSGCLSSIGYARLPNLEILSLWGNNFSGTIPRFIFNASKLSILDLEGNSFSGFIPNTFGNLRNLSWLVLSDNYLTSSTQE 315 (979)
Q Consensus 236 l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~ 315 (979)
+++.+ .+..+++|++|+|++|++++..|..|.++++|++|+|++|++++..+..|.++++|+.|+|++|+|+.++..
T Consensus 208 l~~~~---~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~ 284 (452)
T 3zyi_A 208 IKDMP---NLTPLVGLEELEMSGNHFPEIRPGSFHGLSSLKKLWVMNSQVSLIERNAFDGLASLVELNLAHNNLSSLPHD 284 (452)
T ss_dssp CSSCC---CCTTCTTCCEEECTTSCCSEECGGGGTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSCCCTT
T ss_pred ccccc---cccccccccEEECcCCcCcccCcccccCccCCCEEEeCCCcCceECHHHhcCCCCCCEEECCCCcCCccChH
Confidence 98764 367889999999999999988899999999999999999999988889999999999999999999887764
Q ss_pred hhhhhcccCCCCccEEEccCCCCc
Q 002021 316 LSFLSSLSNCKFLKYFDLSYNPLY 339 (979)
Q Consensus 316 ~~~~~~l~~l~~L~~L~Ls~N~l~ 339 (979)
.+..+++|++|+|++|++.
T Consensus 285 -----~~~~l~~L~~L~L~~Np~~ 303 (452)
T 3zyi_A 285 -----LFTPLRYLVELHLHHNPWN 303 (452)
T ss_dssp -----SSTTCTTCCEEECCSSCEE
T ss_pred -----HhccccCCCEEEccCCCcC
Confidence 3677888888888888764
No 307
>2z80_A TOLL-like receptor 2, variable lymphocyte recepto; TLR2, lipopeptide, innate immunity, glycoprotein, immune RES inflammatory response; HET: NAG; 1.80A {Homo sapiens}
Probab=99.96 E-value=1.4e-29 Score=283.98 Aligned_cols=280 Identities=20% Similarity=0.208 Sum_probs=168.6
Q ss_pred cCEEEccCCccccccCcccccCCCCcEEeccccccccccCccccccccccceeccccccccccchhhhhhcccCCCCccE
Q 002021 251 LEILSLWGNNFSGTIPRFIFNASKLSILDLEGNSFSGFIPNTFGNLRNLSWLVLSDNYLTSSTQELSFLSSLSNCKFLKY 330 (979)
Q Consensus 251 L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~l~~l~~L~~ 330 (979)
....++++|+++ .+|..+. ++|++|++++|++++..+..|.++++|++|+|++|+++..+.. .+.++++|++
T Consensus 33 ~~~c~~~~~~l~-~iP~~~~--~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~-----~~~~l~~L~~ 104 (353)
T 2z80_A 33 NGICKGSSGSLN-SIPSGLT--EAVKSLDLSNNRITYISNSDLQRCVNLQALVLTSNGINTIEED-----SFSSLGSLEH 104 (353)
T ss_dssp TSEEECCSTTCS-SCCTTCC--TTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCCEECTT-----TTTTCTTCCE
T ss_pred CeEeeCCCCCcc-ccccccc--ccCcEEECCCCcCcccCHHHhccCCCCCEEECCCCccCccCHh-----hcCCCCCCCE
Confidence 334555556655 3444433 3566666666666655555666666666666666665544322 2334444444
Q ss_pred EEccCCCCcccCCccccccccccccEEEccCccccCCCCccccCCCcccEEEecCCCCCchhH-HhhhcCCCCcEEEecC
Q 002021 331 FDLSYNPLYRILPRTTVGNLSHSLEEFKMSNCNISGGIPEEISNLTNLRTIYLGGNKLNGSIL-ITLSKLQKLQDLGLKD 409 (979)
Q Consensus 331 L~Ls~N~l~~~~~~~~~~~l~~~L~~L~L~~n~i~~~~p~~l~~l~~L~~L~L~~N~l~~~~~-~~l~~l~~L~~L~L~~ 409 (979)
|++++|+ +++..+..++.+++|++|++++|++++... ..+..+++|++|++++
T Consensus 105 L~Ls~n~--------------------------l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~~l~~L~~L~l~~ 158 (353)
T 2z80_A 105 LDLSYNY--------------------------LSNLSSSWFKPLSSLTFLNLLGNPYKTLGETSLFSHLTKLQILRVGN 158 (353)
T ss_dssp EECCSSC--------------------------CSSCCHHHHTTCTTCSEEECTTCCCSSSCSSCSCTTCTTCCEEEEEE
T ss_pred EECCCCc--------------------------CCcCCHhHhCCCccCCEEECCCCCCcccCchhhhccCCCCcEEECCC
Confidence 4444443 333334446777888888888888876555 5677788888888887
Q ss_pred c-ccCCCccccccCCCCCceEecCCCcccccCCccccCCCcCceEecCCCcccccccccc-CcCCCcEEEeccccccCCC
Q 002021 410 N-KLEGSIPYDICNLAELYRLDLDGNKLSGSIPACFSNLTSLRIVSLGSNELTSIPLTFW-NLKDILNLNFSSNFLTGSL 487 (979)
Q Consensus 410 N-~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~lp~~~~-~l~~L~~L~ls~N~l~~~~ 487 (979)
| .+.+..+..+.++++|++|++++|++++..|..+..+++|++|++++|+++.+|..+. .+++|+.|++++|.+++..
T Consensus 159 n~~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~l~~n~l~~~~~~~~~~~~~L~~L~L~~n~l~~~~ 238 (353)
T 2z80_A 159 MDTFTKIQRKDFAGLTFLEELEIDASDLQSYEPKSLKSIQNVSHLILHMKQHILLLEIFVDVTSSVECLELRDTDLDTFH 238 (353)
T ss_dssp SSSCCEECTTTTTTCCEEEEEEEEETTCCEECTTTTTTCSEEEEEEEECSCSTTHHHHHHHHTTTEEEEEEESCBCTTCC
T ss_pred CccccccCHHHccCCCCCCEEECCCCCcCccCHHHHhccccCCeecCCCCccccchhhhhhhcccccEEECCCCcccccc
Confidence 7 4665556677777788888888888877777777777788888888887777766433 4667777777777776544
Q ss_pred cccccc---ccccceEeccCCccCcccchhhcCCcccceeecCCccccCCCCCcccccccccccccccccccccCCcccc
Q 002021 488 PLEIGS---LKVLVGIDLSRNNFSGVIPTEIGGLKNLEYLFLGYNRLQGSIPNSFGDLISLKFLNLSNNNLSGVIPASLE 564 (979)
Q Consensus 488 p~~~~~---l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~ 564 (979)
+..+.. ...++.++|++|.+++ |.+. .+|..+..+++|+.|||++|+++...+..|.
T Consensus 239 ~~~l~~~~~~~~l~~l~L~~~~l~~-------------------~~l~-~l~~~l~~l~~L~~L~Ls~N~l~~i~~~~~~ 298 (353)
T 2z80_A 239 FSELSTGETNSLIKKFTFRNVKITD-------------------ESLF-QVMKLLNQISGLLELEFSRNQLKSVPDGIFD 298 (353)
T ss_dssp CC------CCCCCCEEEEESCBCCH-------------------HHHH-HHHHHHHTCTTCCEEECCSSCCCCCCTTTTT
T ss_pred ccccccccccchhhccccccccccC-------------------cchh-hhHHHHhcccCCCEEECCCCCCCccCHHHHh
Confidence 433321 2333334444333332 1111 3455566666666666666666633333346
Q ss_pred CccccCeEeccCCcccccCC
Q 002021 565 KLSYLEDLNLSFNQLEGKIP 584 (979)
Q Consensus 565 ~l~~L~~L~L~~N~l~~~~p 584 (979)
.+++|++|+|++|+++|.+|
T Consensus 299 ~l~~L~~L~L~~N~~~~~~~ 318 (353)
T 2z80_A 299 RLTSLQKIWLHTNPWDCSCP 318 (353)
T ss_dssp TCTTCCEEECCSSCBCCCHH
T ss_pred cCCCCCEEEeeCCCccCcCC
Confidence 66677777777777766665
No 308
>1wwl_A Monocyte differentiation antigen CD14; LPS, immune system; HET: NAG; 2.50A {Mus musculus}
Probab=99.96 E-value=4.7e-30 Score=282.18 Aligned_cols=250 Identities=21% Similarity=0.251 Sum_probs=176.7
Q ss_pred CcCCCCCCeeeccCCcccccCCccccccCcccEEecccccc-cccCCcccc-------CCCCCcEEEccCCccCchhhhh
Q 002021 92 LGNLSSLQSLNLSFNRLFGSIPSAIFTTYTLKYVCLRGNQL-SGTFPSFIS-------NKSSLQHLDLSSNALSGEIRAN 163 (979)
Q Consensus 92 l~~l~~L~~L~L~~n~~~~~~p~~~~~l~~L~~L~L~~n~l-~~~~p~~l~-------~l~~L~~L~Ls~N~l~~~~~~~ 163 (979)
++..++|++|++++|++ .+|..+... |++|+|++|++ .+.+|..+. ++++|++|+|++|.+++.
T Consensus 39 ~~~~~~L~~l~l~~n~l--~~p~~~~~~--L~~L~L~~n~l~~~~~~~~~~~~~~~~~~l~~L~~L~L~~n~l~~~---- 110 (312)
T 1wwl_A 39 YGGGRSLEYLLKRVDTE--ADLGQFTDI--IKSLSLKRLTVRAARIPSRILFGALRVLGISGLQELTLENLEVTGT---- 110 (312)
T ss_dssp EEEEEECTTHHHHCCTT--CCCHHHHHH--HHHCCCCEEEEEEEECBHHHHHHHHHHHTTSCCCEEEEEEEBCBSC----
T ss_pred EccCCCceeEeeccccc--ccHHHHHHH--HhhcccccccccCCCcCHHHHHHHHHhcCcCCccEEEccCCcccch----
Confidence 34566788888888888 788777665 88888888888 456777665 788888888888888764
Q ss_pred hhccCCccc--CCCCccceeecccccccccccccccCC-----CCCCceecCCCeeeecCCccccccCccceeeccCCCC
Q 002021 164 ICREIPREF--GNLPELELMSLAANNLQGKIPLKIGNL-----RNLEKLDIGDNKLVGIAPIAIFNVSTLKILGLQDNSL 236 (979)
Q Consensus 164 ~~~~ip~~l--~~l~~L~~L~L~~N~l~~~~p~~~~~l-----~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l 236 (979)
+|..+ +.+++|++|+|++|++++. |..++.+ ++|++|+|++|+++++.|..|.++++|+.|+|++|++
T Consensus 111 ----~~~~~~~~~l~~L~~L~Ls~N~l~~~-~~~~~~l~~~~~~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l 185 (312)
T 1wwl_A 111 ----APPPLLEATGPDLNILNLRNVSWATR-DAWLAELQQWLKPGLKVLSIAQAHSLNFSCEQVRVFPALSTLDLSDNPE 185 (312)
T ss_dssp ----CCCCSSSCCSCCCSEEEEESCBCSSS-SSHHHHHHTTCCTTCCEEEEESCSCCCCCTTTCCCCSSCCEEECCSCTT
T ss_pred ----hHHHHHHhcCCCccEEEccCCCCcch-hHHHHHHHHhhcCCCcEEEeeCCCCccchHHHhccCCCCCEEECCCCCc
Confidence 66665 7888888888888888876 7777776 8888888888888888888888888888888888887
Q ss_pred cCC---CcccccCCCCCcCEEEccCCcccc---ccCcccccCCCCcEEeccccccccccC-ccccccccccceecccccc
Q 002021 237 SGC---LSSIGYARLPNLEILSLWGNNFSG---TIPRFIFNASKLSILDLEGNSFSGFIP-NTFGNLRNLSWLVLSDNYL 309 (979)
Q Consensus 237 ~~~---~~~~~~~~l~~L~~L~L~~N~l~~---~~p~~l~~l~~L~~L~Ls~N~l~~~~~-~~~~~l~~L~~L~Ls~N~l 309 (979)
.+. +....+..+++|++|+|++|++++ .....+.++++|++|+|++|++++.+| ..+..+++|++|+|++|+|
T Consensus 186 ~~~~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~Ls~N~l 265 (312)
T 1wwl_A 186 LGERGLISALCPLKFPTLQVLALRNAGMETPSGVCSALAAARVQLQGLDLSHNSLRDAAGAPSCDWPSQLNSLNLSFTGL 265 (312)
T ss_dssp CHHHHHHHHSCTTSCTTCCEEECTTSCCCCHHHHHHHHHHTTCCCSEEECTTSCCCSSCCCSCCCCCTTCCEEECTTSCC
T ss_pred CcchHHHHHHHhccCCCCCEEECCCCcCcchHHHHHHHHhcCCCCCEEECCCCcCCcccchhhhhhcCCCCEEECCCCcc
Confidence 653 222234677778888888887772 122333456777777777777776553 3444555566666555555
Q ss_pred ccccchhhhhhcccCCCCccEEEccCCCCcccCCccccccccccccEEEccCccccCCCCccccCCCcccEEEecCCCCC
Q 002021 310 TSSTQELSFLSSLSNCKFLKYFDLSYNPLYRILPRTTVGNLSHSLEEFKMSNCNISGGIPEEISNLTNLRTIYLGGNKLN 389 (979)
Q Consensus 310 ~~~~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~~L~~L~L~~n~i~~~~p~~l~~l~~L~~L~L~~N~l~ 389 (979)
+.++... .++|++|++++|+|++. |. +..+++|++|+|++|+++
T Consensus 266 ~~ip~~~----------------------------------~~~L~~L~Ls~N~l~~~-p~-~~~l~~L~~L~L~~N~l~ 309 (312)
T 1wwl_A 266 KQVPKGL----------------------------------PAKLSVLDLSYNRLDRN-PS-PDELPQVGNLSLKGNPFL 309 (312)
T ss_dssp SSCCSSC----------------------------------CSEEEEEECCSSCCCSC-CC-TTTSCEEEEEECTTCTTT
T ss_pred Chhhhhc----------------------------------cCCceEEECCCCCCCCC-hh-HhhCCCCCEEeccCCCCC
Confidence 5433211 13566666666666654 44 777777888888777776
Q ss_pred c
Q 002021 390 G 390 (979)
Q Consensus 390 ~ 390 (979)
+
T Consensus 310 ~ 310 (312)
T 1wwl_A 310 D 310 (312)
T ss_dssp C
T ss_pred C
Confidence 4
No 309
>3zyi_A Leucine-rich repeat-containing protein 4; cell adhesion, LRRC4 complex, synapse; HET: NAG; 2.60A {Homo sapiens} PDB: 3zyo_A* 3zyn_A* 2dl9_A
Probab=99.96 E-value=1.9e-28 Score=284.21 Aligned_cols=249 Identities=24% Similarity=0.276 Sum_probs=220.7
Q ss_pred cEEEccCCCCcccCCccccccccccccEEEccCccccCCCCccccCCCcccEEEecCCCCCchhHHhhhcCCCCcEEEec
Q 002021 329 KYFDLSYNPLYRILPRTTVGNLSHSLEEFKMSNCNISGGIPEEISNLTNLRTIYLGGNKLNGSILITLSKLQKLQDLGLK 408 (979)
Q Consensus 329 ~~L~Ls~N~l~~~~~~~~~~~l~~~L~~L~L~~n~i~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~ 408 (979)
..++.+++.+..++. .++++++.|+|++|+|++..+..|.++++|++|+|++|++++..+..|.++++|++|+|+
T Consensus 57 ~~v~c~~~~l~~iP~-----~~~~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~ 131 (452)
T 3zyi_A 57 SKVVCTRRGLSEVPQ-----GIPSNTRYLNLMENNIQMIQADTFRHLHHLEVLQLGRNSIRQIEVGAFNGLASLNTLELF 131 (452)
T ss_dssp CEEECCSSCCSSCCS-----CCCTTCSEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECC
T ss_pred cEEEECCCCcCccCC-----CCCCCccEEECcCCcCceECHHHcCCCCCCCEEECCCCccCCcChhhccCcccCCEEECC
Confidence 455666666655532 234678888888888888888999999999999999999999999999999999999999
Q ss_pred CcccCCCccccccCCCCCceEecCCCcccccCCccccCCCcCceEecCC-Cccccccc-cccCcCCCcEEEeccccccCC
Q 002021 409 DNKLEGSIPYDICNLAELYRLDLDGNKLSGSIPACFSNLTSLRIVSLGS-NELTSIPL-TFWNLKDILNLNFSSNFLTGS 486 (979)
Q Consensus 409 ~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~-N~l~~lp~-~~~~l~~L~~L~ls~N~l~~~ 486 (979)
+|++++..+..|..+++|++|+|++|++++..+..|.++++|++|++++ |.++.+|. .+..+++|+.|++++|++++.
T Consensus 132 ~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~~~~l~~i~~~~~~~l~~L~~L~L~~n~l~~~ 211 (452)
T 3zyi_A 132 DNWLTVIPSGAFEYLSKLRELWLRNNPIESIPSYAFNRVPSLMRLDLGELKKLEYISEGAFEGLFNLKYLNLGMCNIKDM 211 (452)
T ss_dssp SSCCSBCCTTTSSSCTTCCEEECCSCCCCEECTTTTTTCTTCCEEECCCCTTCCEECTTTTTTCTTCCEEECTTSCCSSC
T ss_pred CCcCCccChhhhcccCCCCEEECCCCCcceeCHhHHhcCCcccEEeCCCCCCccccChhhccCCCCCCEEECCCCccccc
Confidence 9999987777899999999999999999988888999999999999998 67778876 588899999999999999964
Q ss_pred CccccccccccceEeccCCccCcccchhhcCCcccceeecCCccccCCCCCcccccccccccccccccccccCCccccCc
Q 002021 487 LPLEIGSLKVLVGIDLSRNNFSGVIPTEIGGLKNLEYLFLGYNRLQGSIPNSFGDLISLKFLNLSNNNLSGVIPASLEKL 566 (979)
Q Consensus 487 ~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l 566 (979)
| .+..+.+|+.|+|++|+|++..|..|.++++|+.|+|++|++++..|..|.++++|+.|+|++|+|++..+..|..+
T Consensus 212 -~-~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l 289 (452)
T 3zyi_A 212 -P-NLTPLVGLEELEMSGNHFPEIRPGSFHGLSSLKKLWVMNSQVSLIERNAFDGLASLVELNLAHNNLSSLPHDLFTPL 289 (452)
T ss_dssp -C-CCTTCTTCCEEECTTSCCSEECGGGGTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSCCCTTSSTTC
T ss_pred -c-cccccccccEEECcCCcCcccCcccccCccCCCEEEeCCCcCceECHHHhcCCCCCCEEECCCCcCCccChHHhccc
Confidence 4 58889999999999999999999999999999999999999998889999999999999999999998888889999
Q ss_pred cccCeEeccCCcccccCC
Q 002021 567 SYLEDLNLSFNQLEGKIP 584 (979)
Q Consensus 567 ~~L~~L~L~~N~l~~~~p 584 (979)
++|+.|+|++|++.|...
T Consensus 290 ~~L~~L~L~~Np~~CdC~ 307 (452)
T 3zyi_A 290 RYLVELHLHHNPWNCDCD 307 (452)
T ss_dssp TTCCEEECCSSCEECSTT
T ss_pred cCCCEEEccCCCcCCCCC
Confidence 999999999999988654
No 310
>3zyj_A Leucine-rich repeat-containing protein 4C; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens}
Probab=99.96 E-value=2.6e-28 Score=282.03 Aligned_cols=250 Identities=24% Similarity=0.283 Sum_probs=219.1
Q ss_pred ccEEEccCCCCcccCCccccccccccccEEEccCccccCCCCccccCCCcccEEEecCCCCCchhHHhhhcCCCCcEEEe
Q 002021 328 LKYFDLSYNPLYRILPRTTVGNLSHSLEEFKMSNCNISGGIPEEISNLTNLRTIYLGGNKLNGSILITLSKLQKLQDLGL 407 (979)
Q Consensus 328 L~~L~Ls~N~l~~~~~~~~~~~l~~~L~~L~L~~n~i~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L 407 (979)
...++.+++.+..++.. ++.+++.|+|++|+|++..+..|.++++|++|+|++|.+++..+..|.++++|++|+|
T Consensus 45 ~~~v~c~~~~l~~iP~~-----~~~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~i~~~~~~~l~~L~~L~L 119 (440)
T 3zyj_A 45 FSKVICVRKNLREVPDG-----ISTNTRLLNLHENQIQIIKVNSFKHLRHLEILQLSRNHIRTIEIGAFNGLANLNTLEL 119 (440)
T ss_dssp SCEEECCSCCCSSCCSC-----CCTTCSEEECCSCCCCEECTTTTSSCSSCCEEECCSSCCCEECGGGGTTCSSCCEEEC
T ss_pred CCEEEeCCCCcCcCCCC-----CCCCCcEEEccCCcCCeeCHHHhhCCCCCCEEECCCCcCCccChhhccCCccCCEEEC
Confidence 34555666665555332 2357888888888888888889999999999999999999998999999999999999
Q ss_pred cCcccCCCccccccCCCCCceEecCCCcccccCCccccCCCcCceEecCC-Cccccccc-cccCcCCCcEEEeccccccC
Q 002021 408 KDNKLEGSIPYDICNLAELYRLDLDGNKLSGSIPACFSNLTSLRIVSLGS-NELTSIPL-TFWNLKDILNLNFSSNFLTG 485 (979)
Q Consensus 408 ~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~-N~l~~lp~-~~~~l~~L~~L~ls~N~l~~ 485 (979)
++|++++..+..|..+++|++|+|++|+|....+..|.++++|++|+|++ |.++.++. .|.++++|+.|++++|+++.
T Consensus 120 ~~n~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~l~~~~~l~~i~~~~~~~l~~L~~L~L~~n~l~~ 199 (440)
T 3zyj_A 120 FDNRLTTIPNGAFVYLSKLKELWLRNNPIESIPSYAFNRIPSLRRLDLGELKRLSYISEGAFEGLSNLRYLNLAMCNLRE 199 (440)
T ss_dssp CSSCCSSCCTTTSCSCSSCCEEECCSCCCCEECTTTTTTCTTCCEEECCCCTTCCEECTTTTTTCSSCCEEECTTSCCSS
T ss_pred CCCcCCeeCHhHhhccccCceeeCCCCcccccCHHHhhhCcccCEeCCCCCCCcceeCcchhhcccccCeecCCCCcCcc
Confidence 99999977777899999999999999999988888999999999999998 56777776 58889999999999999984
Q ss_pred CCccccccccccceEeccCCccCcccchhhcCCcccceeecCCccccCCCCCcccccccccccccccccccccCCccccC
Q 002021 486 SLPLEIGSLKVLVGIDLSRNNFSGVIPTEIGGLKNLEYLFLGYNRLQGSIPNSFGDLISLKFLNLSNNNLSGVIPASLEK 565 (979)
Q Consensus 486 ~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~ 565 (979)
+| .+..+++|+.|+|++|+|++..|..|.++++|+.|+|++|++++..+..|.++++|+.|+|++|+|++..+..|..
T Consensus 200 -~~-~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~ 277 (440)
T 3zyj_A 200 -IP-NLTPLIKLDELDLSGNHLSAIRPGSFQGLMHLQKLWMIQSQIQVIERNAFDNLQSLVEINLAHNNLTLLPHDLFTP 277 (440)
T ss_dssp -CC-CCTTCSSCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCCEECTTSSTTCTTCCEEECTTSCCCCCCTTTTSS
T ss_pred -cc-ccCCCcccCEEECCCCccCccChhhhccCccCCEEECCCCceeEEChhhhcCCCCCCEEECCCCCCCccChhHhcc
Confidence 45 5888999999999999999999999999999999999999999888999999999999999999999888888999
Q ss_pred ccccCeEeccCCcccccCC
Q 002021 566 LSYLEDLNLSFNQLEGKIP 584 (979)
Q Consensus 566 l~~L~~L~L~~N~l~~~~p 584 (979)
+++|+.|+|++|+|.|...
T Consensus 278 l~~L~~L~L~~Np~~CdC~ 296 (440)
T 3zyj_A 278 LHHLERIHLHHNPWNCNCD 296 (440)
T ss_dssp CTTCCEEECCSSCEECSST
T ss_pred ccCCCEEEcCCCCccCCCC
Confidence 9999999999999987654
No 311
>1wwl_A Monocyte differentiation antigen CD14; LPS, immune system; HET: NAG; 2.50A {Mus musculus}
Probab=99.96 E-value=1.5e-30 Score=286.20 Aligned_cols=267 Identities=21% Similarity=0.208 Sum_probs=226.0
Q ss_pred cccCCCCCCCccceeEeeCCCCcEEEEEecCCCccccCCCCCcCCCCCCeeeccCCcc-cccCCcccc-------ccCcc
Q 002021 51 KNWNTSTPVCNWTGVACEVHSQRVTVLNISSLNLTGTIPSQLGNLSSLQSLNLSFNRL-FGSIPSAIF-------TTYTL 122 (979)
Q Consensus 51 ~~w~~~~~~c~w~gv~c~~~~~~v~~l~l~~~~l~g~~~~~l~~l~~L~~L~L~~n~~-~~~~p~~~~-------~l~~L 122 (979)
..|.....|+.|..+.+.....+++.|++++|.+ .+|..+... |++|+|++|++ .+.+|..++ .+++|
T Consensus 22 ~~~~~~~~c~~~~~~~~~~~~~~L~~l~l~~n~l--~~p~~~~~~--L~~L~L~~n~l~~~~~~~~~~~~~~~~~~l~~L 97 (312)
T 1wwl_A 22 PDWSSAFNCLGAADVELYGGGRSLEYLLKRVDTE--ADLGQFTDI--IKSLSLKRLTVRAARIPSRILFGALRVLGISGL 97 (312)
T ss_dssp CCGGGGGGSSSCSEEEEEEEEEECTTHHHHCCTT--CCCHHHHHH--HHHCCCCEEEEEEEECBHHHHHHHHHHHTTSCC
T ss_pred cchHHHhhhhccccEEEEccCCCceeEeeccccc--ccHHHHHHH--HhhcccccccccCCCcCHHHHHHHHHhcCcCCc
Confidence 4687767788888776554556788899999999 788776655 99999999999 567888877 79999
Q ss_pred cEEecccccccccCCccc--cCCCCCcEEEccCCccCchhhhhhhccCCcccCCC-----Cccceeeccccccccccccc
Q 002021 123 KYVCLRGNQLSGTFPSFI--SNKSSLQHLDLSSNALSGEIRANICREIPREFGNL-----PELELMSLAANNLQGKIPLK 195 (979)
Q Consensus 123 ~~L~L~~n~l~~~~p~~l--~~l~~L~~L~Ls~N~l~~~~~~~~~~~ip~~l~~l-----~~L~~L~L~~N~l~~~~p~~ 195 (979)
++|+|++|++++.+|..+ +.+++|++|+|++|.+++ +|..++.+ ++|++|+|++|++++..|..
T Consensus 98 ~~L~L~~n~l~~~~~~~~~~~~l~~L~~L~Ls~N~l~~---------~~~~~~~l~~~~~~~L~~L~L~~N~l~~~~~~~ 168 (312)
T 1wwl_A 98 QELTLENLEVTGTAPPPLLEATGPDLNILNLRNVSWAT---------RDAWLAELQQWLKPGLKVLSIAQAHSLNFSCEQ 168 (312)
T ss_dssp CEEEEEEEBCBSCCCCCSSSCCSCCCSEEEEESCBCSS---------SSSHHHHHHTTCCTTCCEEEEESCSCCCCCTTT
T ss_pred cEEEccCCcccchhHHHHHHhcCCCccEEEccCCCCcc---------hhHHHHHHHHhhcCCCcEEEeeCCCCccchHHH
Confidence 999999999999999986 999999999999999985 46666666 99999999999999988899
Q ss_pred ccCCCCCCceecCCCeeeec--CCccc--cccCccceeeccCCCCcCCC--cccccCCCCCcCEEEccCCccccccC-cc
Q 002021 196 IGNLRNLEKLDIGDNKLVGI--APIAI--FNVSTLKILGLQDNSLSGCL--SSIGYARLPNLEILSLWGNNFSGTIP-RF 268 (979)
Q Consensus 196 ~~~l~~L~~L~Ls~N~l~~~--~p~~l--~~l~~L~~L~L~~N~l~~~~--~~~~~~~l~~L~~L~L~~N~l~~~~p-~~ 268 (979)
|+++++|++|+|++|++.+. .|..+ .++++|+.|+|++|+|++.. ....+..+++|++|+|++|++++.+| ..
T Consensus 169 ~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~ 248 (312)
T 1wwl_A 169 VRVFPALSTLDLSDNPELGERGLISALCPLKFPTLQVLALRNAGMETPSGVCSALAAARVQLQGLDLSHNSLRDAAGAPS 248 (312)
T ss_dssp CCCCSSCCEEECCSCTTCHHHHHHHHSCTTSCTTCCEEECTTSCCCCHHHHHHHHHHTTCCCSEEECTTSCCCSSCCCSC
T ss_pred hccCCCCCEEECCCCCcCcchHHHHHHHhccCCCCCEEECCCCcCcchHHHHHHHHhcCCCCCEEECCCCcCCcccchhh
Confidence 99999999999999998765 23334 88999999999999998543 23345688999999999999998775 45
Q ss_pred cccCCCCcEEeccccccccccCccccccccccceeccccccccccchhhhhhcccCCCCccEEEccCCCCcc
Q 002021 269 IFNASKLSILDLEGNSFSGFIPNTFGNLRNLSWLVLSDNYLTSSTQELSFLSSLSNCKFLKYFDLSYNPLYR 340 (979)
Q Consensus 269 l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~l~~l~~L~~L~Ls~N~l~~ 340 (979)
+..+++|++|+|++|+|+ .+|..+. ++|++|+|++|+|++.+. +..+++|++|++++|++++
T Consensus 249 ~~~l~~L~~L~Ls~N~l~-~ip~~~~--~~L~~L~Ls~N~l~~~p~-------~~~l~~L~~L~L~~N~l~~ 310 (312)
T 1wwl_A 249 CDWPSQLNSLNLSFTGLK-QVPKGLP--AKLSVLDLSYNRLDRNPS-------PDELPQVGNLSLKGNPFLD 310 (312)
T ss_dssp CCCCTTCCEEECTTSCCS-SCCSSCC--SEEEEEECCSSCCCSCCC-------TTTSCEEEEEECTTCTTTC
T ss_pred hhhcCCCCEEECCCCccC-hhhhhcc--CCceEEECCCCCCCCChh-------HhhCCCCCEEeccCCCCCC
Confidence 667899999999999999 5677666 899999999999998742 5678888888888888765
No 312
>4fcg_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, LRR, N- and C-terminal helices; 2.00A {Xanthomonas campestris PV}
Probab=99.96 E-value=1.4e-28 Score=272.04 Aligned_cols=224 Identities=20% Similarity=0.251 Sum_probs=187.3
Q ss_pred cccEEEccCccccCCCCccccCCCcccEEEecCCCCCchhHHhhhcCCCCcEEEecCcccCCCccccccCCCCCceEecC
Q 002021 353 SLEEFKMSNCNISGGIPEEISNLTNLRTIYLGGNKLNGSILITLSKLQKLQDLGLKDNKLEGSIPYDICNLAELYRLDLD 432 (979)
Q Consensus 353 ~L~~L~L~~n~i~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls 432 (979)
.++.|++++|+++ .+|..+..+++|++|+|++|.++ .+|..+.++++|++|++++|.++ .+|..+.++++|++|+++
T Consensus 82 ~l~~L~L~~n~l~-~lp~~l~~l~~L~~L~L~~n~l~-~lp~~~~~l~~L~~L~Ls~n~l~-~lp~~l~~l~~L~~L~L~ 158 (328)
T 4fcg_A 82 GRVALELRSVPLP-QFPDQAFRLSHLQHMTIDAAGLM-ELPDTMQQFAGLETLTLARNPLR-ALPASIASLNRLRELSIR 158 (328)
T ss_dssp TCCEEEEESSCCS-SCCSCGGGGTTCSEEEEESSCCC-CCCSCGGGGTTCSEEEEESCCCC-CCCGGGGGCTTCCEEEEE
T ss_pred ceeEEEccCCCch-hcChhhhhCCCCCEEECCCCCcc-chhHHHhccCCCCEEECCCCccc-cCcHHHhcCcCCCEEECC
Confidence 4556666666665 45666667777777777777777 56666777777777777777777 567777777777777777
Q ss_pred CCcccccCCcccc---------CCCcCceEecCCCccccccccccCcCCCcEEEeccccccCCCccccccccccceEecc
Q 002021 433 GNKLSGSIPACFS---------NLTSLRIVSLGSNELTSIPLTFWNLKDILNLNFSSNFLTGSLPLEIGSLKVLVGIDLS 503 (979)
Q Consensus 433 ~N~l~~~~~~~~~---------~l~~L~~L~L~~N~l~~lp~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~Ls 503 (979)
+|++.+.+|..+. ++++|++|+|++|+++.+|..+..+++|+.|++++|++++ +|..++.+++|+.|+|+
T Consensus 159 ~n~~~~~~p~~~~~~~~~~~~~~l~~L~~L~L~~n~l~~lp~~l~~l~~L~~L~L~~N~l~~-l~~~l~~l~~L~~L~Ls 237 (328)
T 4fcg_A 159 ACPELTELPEPLASTDASGEHQGLVNLQSLRLEWTGIRSLPASIANLQNLKSLKIRNSPLSA-LGPAIHHLPKLEELDLR 237 (328)
T ss_dssp EETTCCCCCSCSEEEC-CCCEEESTTCCEEEEEEECCCCCCGGGGGCTTCCEEEEESSCCCC-CCGGGGGCTTCCEEECT
T ss_pred CCCCccccChhHhhccchhhhccCCCCCEEECcCCCcCcchHhhcCCCCCCEEEccCCCCCc-CchhhccCCCCCEEECc
Confidence 7777777776655 4899999999999999999999999999999999999995 66679999999999999
Q ss_pred CCccCcccchhhcCCcccceeecCCccccCCCCCcccccccccccccccccccccCCccccCccccCeEeccCCccc
Q 002021 504 RNNFSGVIPTEIGGLKNLEYLFLGYNRLQGSIPNSFGDLISLKFLNLSNNNLSGVIPASLEKLSYLEDLNLSFNQLE 580 (979)
Q Consensus 504 ~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~ 580 (979)
+|++.+.+|..|+++++|++|+|++|++.+.+|..+.++++|++|+|++|++.+.+|..+.++++|+.+++..|.+.
T Consensus 238 ~n~~~~~~p~~~~~l~~L~~L~L~~n~~~~~~p~~~~~l~~L~~L~L~~n~~~~~iP~~l~~L~~L~~l~l~~~~~~ 314 (328)
T 4fcg_A 238 GCTALRNYPPIFGGRAPLKRLILKDCSNLLTLPLDIHRLTQLEKLDLRGCVNLSRLPSLIAQLPANCIILVPPHLQA 314 (328)
T ss_dssp TCTTCCBCCCCTTCCCCCCEEECTTCTTCCBCCTTGGGCTTCCEEECTTCTTCCCCCGGGGGSCTTCEEECCGGGSC
T ss_pred CCcchhhhHHHhcCCCCCCEEECCCCCchhhcchhhhcCCCCCEEeCCCCCchhhccHHHhhccCceEEeCCHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999887765
No 313
>1ozn_A Reticulon 4 receptor; NOGO receptor, MAD, myelination inhibition, OMGP, MAG, NOGO- signal transduction, neuronal regeneration, ligand binding; HET: NDG MAN NAG BMA; 1.52A {Homo sapiens} SCOP: c.10.2.7 PDB: 1p8t_A* 3kj4_A*
Probab=99.95 E-value=2.3e-28 Score=265.28 Aligned_cols=227 Identities=24% Similarity=0.267 Sum_probs=184.6
Q ss_pred EEEEecCCCccccCCCCCcCCCCCCeeeccCCcccccCCccccccCcccEEecccccccccCCccccCCCCCcEEEccCC
Q 002021 75 TVLNISSLNLTGTIPSQLGNLSSLQSLNLSFNRLFGSIPSAIFTTYTLKYVCLRGNQLSGTFPSFISNKSSLQHLDLSSN 154 (979)
Q Consensus 75 ~~l~l~~~~l~g~~~~~l~~l~~L~~L~L~~n~~~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~N 154 (979)
+.+++++++++ .+|..+ .++|++|+|++|++++..|..+..+++|++|+|++|++++..|..++++++|++|+|++|
T Consensus 14 ~~~~c~~~~l~-~ip~~~--~~~l~~L~l~~n~i~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n 90 (285)
T 1ozn_A 14 VTTSCPQQGLQ-AVPVGI--PAASQRIFLHGNRISHVPAASFRACRNLTILWLHSNVLARIDAAAFTGLALLEQLDLSDN 90 (285)
T ss_dssp CEEECCSSCCS-SCCTTC--CTTCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSC
T ss_pred eEEEcCcCCcc-cCCcCC--CCCceEEEeeCCcCCccCHHHcccCCCCCEEECCCCccceeCHhhcCCccCCCEEeCCCC
Confidence 56778888887 456544 578999999999999877788999999999999999999888889999999999999999
Q ss_pred c-cCchhhhhhhccCCcccCCCCccceeecccccccccccccccCCCCCCceecCCCeeeecCCccccccCccceeeccC
Q 002021 155 A-LSGEIRANICREIPREFGNLPELELMSLAANNLQGKIPLKIGNLRNLEKLDIGDNKLVGIAPIAIFNVSTLKILGLQD 233 (979)
Q Consensus 155 ~-l~~~~~~~~~~~ip~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~ 233 (979)
. +++. .|..+.++++|++|++++|.+++..|..+.++++|++|+|++|+++++.+..|.++++|+.|+|++
T Consensus 91 ~~l~~~--------~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~ 162 (285)
T 1ozn_A 91 AQLRSV--------DPATFHGLGRLHTLHLDRCGLQELGPGLFRGLAALQYLYLQDNALQALPDDTFRDLGNLTHLFLHG 162 (285)
T ss_dssp TTCCCC--------CTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCS
T ss_pred CCcccc--------CHHHhcCCcCCCEEECCCCcCCEECHhHhhCCcCCCEEECCCCcccccCHhHhccCCCccEEECCC
Confidence 7 6532 367788899999999999999888888888899999999999999888777788888888888888
Q ss_pred CCCcCCCcccccCCCCCcCEEEccCCccccccCcccccCCCCcEEeccccccccccCccccccccccceecccccccccc
Q 002021 234 NSLSGCLSSIGYARLPNLEILSLWGNNFSGTIPRFIFNASKLSILDLEGNSFSGFIPNTFGNLRNLSWLVLSDNYLTSST 313 (979)
Q Consensus 234 N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~ 313 (979)
|++++.... .|..+++|++|+|++|++++..|..+..+++|++|++++|++++..+..|..+++|++|+|++|.+....
T Consensus 163 n~l~~~~~~-~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~~~c~~ 241 (285)
T 1ozn_A 163 NRISSVPER-AFRGLHSLDRLLLHQNRVAHVHPHAFRDLGRLMTLYLFANNLSALPTEALAPLRALQYLRLNDNPWVCDC 241 (285)
T ss_dssp SCCCEECTT-TTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCSCCCHHHHTTCTTCCEEECCSSCEECSG
T ss_pred CcccccCHH-HhcCccccCEEECCCCcccccCHhHccCcccccEeeCCCCcCCcCCHHHcccCcccCEEeccCCCccCCC
Confidence 888765433 3667788888888888887777777777788888888888887766666777777777777777776543
No 314
>3zyj_A Leucine-rich repeat-containing protein 4C; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens}
Probab=99.95 E-value=8.5e-28 Score=277.75 Aligned_cols=244 Identities=23% Similarity=0.237 Sum_probs=214.5
Q ss_pred EEecCCCccccCCCCCcCCCCCCeeeccCCcccccCCccccccCcccEEecccccccccCCccccCCCCCcEEEccCCcc
Q 002021 77 LNISSLNLTGTIPSQLGNLSSLQSLNLSFNRLFGSIPSAIFTTYTLKYVCLRGNQLSGTFPSFISNKSSLQHLDLSSNAL 156 (979)
Q Consensus 77 l~l~~~~l~g~~~~~l~~l~~L~~L~L~~n~~~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l 156 (979)
++.++.+++ .+|..+. ++++.|+|++|++++..|..+..+++|++|+|++|++++..+..|.++++|++|+|++|++
T Consensus 48 v~c~~~~l~-~iP~~~~--~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~i~~~~~~~l~~L~~L~L~~n~l 124 (440)
T 3zyj_A 48 VICVRKNLR-EVPDGIS--TNTRLLNLHENQIQIIKVNSFKHLRHLEILQLSRNHIRTIEIGAFNGLANLNTLELFDNRL 124 (440)
T ss_dssp EECCSCCCS-SCCSCCC--TTCSEEECCSCCCCEECTTTTSSCSSCCEEECCSSCCCEECGGGGTTCSSCCEEECCSSCC
T ss_pred EEeCCCCcC-cCCCCCC--CCCcEEEccCCcCCeeCHHHhhCCCCCCEEECCCCcCCccChhhccCCccCCEEECCCCcC
Confidence 444555666 5777664 7899999999999988889999999999999999999988889999999999999999999
Q ss_pred CchhhhhhhccCCcccCCCCccceeecccccccccccccccCCCCCCceecCC-CeeeecCCccccccCccceeeccCCC
Q 002021 157 SGEIRANICREIPREFGNLPELELMSLAANNLQGKIPLKIGNLRNLEKLDIGD-NKLVGIAPIAIFNVSTLKILGLQDNS 235 (979)
Q Consensus 157 ~~~~~~~~~~~ip~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~-N~l~~~~p~~l~~l~~L~~L~L~~N~ 235 (979)
++. .+..|.++++|++|+|++|.+++..+..|.++++|++|+|++ |.+..+.+..|.++++|+.|+|++|+
T Consensus 125 ~~~--------~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~l~~~~~l~~i~~~~~~~l~~L~~L~L~~n~ 196 (440)
T 3zyj_A 125 TTI--------PNGAFVYLSKLKELWLRNNPIESIPSYAFNRIPSLRRLDLGELKRLSYISEGAFEGLSNLRYLNLAMCN 196 (440)
T ss_dssp SSC--------CTTTSCSCSSCCEEECCSCCCCEECTTTTTTCTTCCEEECCCCTTCCEECTTTTTTCSSCCEEECTTSC
T ss_pred Cee--------CHhHhhccccCceeeCCCCcccccCHHHhhhCcccCEeCCCCCCCcceeCcchhhcccccCeecCCCCc
Confidence 843 334799999999999999999988888999999999999998 56777777789999999999999999
Q ss_pred CcCCCcccccCCCCCcCEEEccCCccccccCcccccCCCCcEEeccccccccccCccccccccccceeccccccccccch
Q 002021 236 LSGCLSSIGYARLPNLEILSLWGNNFSGTIPRFIFNASKLSILDLEGNSFSGFIPNTFGNLRNLSWLVLSDNYLTSSTQE 315 (979)
Q Consensus 236 l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~ 315 (979)
++..+ .+..+++|++|+|++|++++..|..|.++++|++|+|++|++++..+..|.++++|+.|+|++|+++.++..
T Consensus 197 l~~~~---~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~ 273 (440)
T 3zyj_A 197 LREIP---NLTPLIKLDELDLSGNHLSAIRPGSFQGLMHLQKLWMIQSQIQVIERNAFDNLQSLVEINLAHNNLTLLPHD 273 (440)
T ss_dssp CSSCC---CCTTCSSCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCCEECTTSSTTCTTCCEEECTTSCCCCCCTT
T ss_pred Ccccc---ccCCCcccCEEECCCCccCccChhhhccCccCCEEECCCCceeEEChhhhcCCCCCCEEECCCCCCCccChh
Confidence 98765 367899999999999999988899999999999999999999999899999999999999999999988765
Q ss_pred hhhhhcccCCCCccEEEccCCCCc
Q 002021 316 LSFLSSLSNCKFLKYFDLSYNPLY 339 (979)
Q Consensus 316 ~~~~~~l~~l~~L~~L~Ls~N~l~ 339 (979)
.+..+++|++|+|++|++.
T Consensus 274 -----~~~~l~~L~~L~L~~Np~~ 292 (440)
T 3zyj_A 274 -----LFTPLHHLERIHLHHNPWN 292 (440)
T ss_dssp -----TTSSCTTCCEEECCSSCEE
T ss_pred -----HhccccCCCEEEcCCCCcc
Confidence 3677888888888888864
No 315
>1ozn_A Reticulon 4 receptor; NOGO receptor, MAD, myelination inhibition, OMGP, MAG, NOGO- signal transduction, neuronal regeneration, ligand binding; HET: NDG MAN NAG BMA; 1.52A {Homo sapiens} SCOP: c.10.2.7 PDB: 1p8t_A* 3kj4_A*
Probab=99.95 E-value=1.9e-28 Score=265.95 Aligned_cols=251 Identities=22% Similarity=0.256 Sum_probs=144.6
Q ss_pred cEEEccCCCCcccCCccccccccccccEEEccCccccCCCCccccCCCcccEEEecCCCCCchhHHhhhcCCCCcEEEec
Q 002021 329 KYFDLSYNPLYRILPRTTVGNLSHSLEEFKMSNCNISGGIPEEISNLTNLRTIYLGGNKLNGSILITLSKLQKLQDLGLK 408 (979)
Q Consensus 329 ~~L~Ls~N~l~~~~~~~~~~~l~~~L~~L~L~~n~i~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~ 408 (979)
+.++++++.+..++. .++++|++|++++|+|++..+..|..+++|++|+|++|.+++..+..|..+++|++|+++
T Consensus 14 ~~~~c~~~~l~~ip~-----~~~~~l~~L~l~~n~i~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~ 88 (285)
T 1ozn_A 14 VTTSCPQQGLQAVPV-----GIPAASQRIFLHGNRISHVPAASFRACRNLTILWLHSNVLARIDAAAFTGLALLEQLDLS 88 (285)
T ss_dssp CEEECCSSCCSSCCT-----TCCTTCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECC
T ss_pred eEEEcCcCCcccCCc-----CCCCCceEEEeeCCcCCccCHHHcccCCCCCEEECCCCccceeCHhhcCCccCCCEEeCC
Confidence 345555555554422 123456666666666666666667777777777777777776666666667777777777
Q ss_pred Ccc-cCCCccccccCCCCCceEecCCCcccccCCccccCCCcCceEecCCCcccccccc-ccCcCCCcEEEeccccccCC
Q 002021 409 DNK-LEGSIPYDICNLAELYRLDLDGNKLSGSIPACFSNLTSLRIVSLGSNELTSIPLT-FWNLKDILNLNFSSNFLTGS 486 (979)
Q Consensus 409 ~N~-l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~lp~~-~~~l~~L~~L~ls~N~l~~~ 486 (979)
+|. +....|..+..+++|++|++++|++++..+..|.++++|++|++++|+++.+|.. +..+++|+.|++++|++++.
T Consensus 89 ~n~~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~ 168 (285)
T 1ozn_A 89 DNAQLRSVDPATFHGLGRLHTLHLDRCGLQELGPGLFRGLAALQYLYLQDNALQALPDDTFRDLGNLTHLFLHGNRISSV 168 (285)
T ss_dssp SCTTCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCEE
T ss_pred CCCCccccCHHHhcCCcCCCEEECCCCcCCEECHhHhhCCcCCCEEECCCCcccccCHhHhccCCCccEEECCCCccccc
Confidence 775 5555566666666666666666666666666666666666666666666655543 45555555555555555544
Q ss_pred CccccccccccceEeccCCccCcccchhhcCCcccceeecCCccccCCCCCcccccccccccccccccccccCCccccCc
Q 002021 487 LPLEIGSLKVLVGIDLSRNNFSGVIPTEIGGLKNLEYLFLGYNRLQGSIPNSFGDLISLKFLNLSNNNLSGVIPASLEKL 566 (979)
Q Consensus 487 ~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l 566 (979)
.+..+..+++|+.|+|++|++++..|..|..+++|+.|+|++|++++..+..+..+++|+.|+|++|+++...+.. .-.
T Consensus 169 ~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~~~c~~~~~-~~~ 247 (285)
T 1ozn_A 169 PERAFRGLHSLDRLLLHQNRVAHVHPHAFRDLGRLMTLYLFANNLSALPTEALAPLRALQYLRLNDNPWVCDCRAR-PLW 247 (285)
T ss_dssp CTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCSCCCHHHHTTCTTCCEEECCSSCEECSGGGH-HHH
T ss_pred CHHHhcCccccCEEECCCCcccccCHhHccCcccccEeeCCCCcCCcCCHHHcccCcccCEEeccCCCccCCCCcH-HHH
Confidence 4444555555555555555555555555555555555555555555444444555555555555555554322211 111
Q ss_pred cccCeEeccCCcccccCCC
Q 002021 567 SYLEDLNLSFNQLEGKIPR 585 (979)
Q Consensus 567 ~~L~~L~L~~N~l~~~~p~ 585 (979)
..++.+..+.|.+.|..|.
T Consensus 248 ~~l~~~~~~~~~~~c~~p~ 266 (285)
T 1ozn_A 248 AWLQKFRGSSSEVPCSLPQ 266 (285)
T ss_dssp HHHHHCCSEECCCBEEESG
T ss_pred HHHHhcccccCccccCCch
Confidence 2334444455555555553
No 316
>3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=99.95 E-value=3.3e-30 Score=300.57 Aligned_cols=217 Identities=24% Similarity=0.249 Sum_probs=113.4
Q ss_pred cccEEEecCCCCCchhHHhhhcCCCCcEEEecCcccCCCccccccCCCCCceEecCCCcccccCCccccCCCcCceEecC
Q 002021 377 NLRTIYLGGNKLNGSILITLSKLQKLQDLGLKDNKLEGSIPYDICNLAELYRLDLDGNKLSGSIPACFSNLTSLRIVSLG 456 (979)
Q Consensus 377 ~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~ 456 (979)
+|++|+|++|.+++..+..|..+++|++|+|++|.+++..| +..+++|++|+|++|.|++..+ .++|++|+++
T Consensus 35 ~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~Ls~N~l~~l~~-----~~~L~~L~L~ 107 (487)
T 3oja_A 35 NVKELDLSGNPLSQISAADLAPFTKLELLNLSSNVLYETLD--LESLSTLRTLDLNNNYVQELLV-----GPSIETLHAA 107 (487)
T ss_dssp GCCEEECCSSCCCCCCGGGGTTCTTCCEEECTTSCCEEEEE--CTTCTTCCEEECCSSEEEEEEE-----CTTCCEEECC
T ss_pred CccEEEeeCCcCCCCCHHHHhCCCCCCEEEeeCCCCCCCcc--cccCCCCCEEEecCCcCCCCCC-----CCCcCEEECc
Confidence 45555555555555444555555555555555555544333 5555555555555555543221 2455555555
Q ss_pred CCccccccccccCcCCCcEEEeccccccCCCccccccccccceEeccCCccCcccchhhc-CCcccceeecCCccccCCC
Q 002021 457 SNELTSIPLTFWNLKDILNLNFSSNFLTGSLPLEIGSLKVLVGIDLSRNNFSGVIPTEIG-GLKNLEYLFLGYNRLQGSI 535 (979)
Q Consensus 457 ~N~l~~lp~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~-~l~~L~~L~Ls~N~l~~~~ 535 (979)
+|.++.++.. .+++|+.|++++|.+++..|..++.+++|+.|+|++|.+++.+|..+. .+++|+.|+|++|.|++..
T Consensus 108 ~N~l~~~~~~--~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~~l~~L~~L~Ls~N~l~~~~ 185 (487)
T 3oja_A 108 NNNISRVSCS--RGQGKKNIYLANNKITMLRDLDEGCRSRVQYLDLKLNEIDTVNFAELAASSDTLEHLNLQYNFIYDVK 185 (487)
T ss_dssp SSCCCCEEEC--CCSSCEEEECCSSCCCSGGGBCGGGGSSEEEEECTTSCCCEEEGGGGGGGTTTCCEEECTTSCCCEEE
T ss_pred CCcCCCCCcc--ccCCCCEEECCCCCCCCCCchhhcCCCCCCEEECCCCCCCCcChHHHhhhCCcccEEecCCCcccccc
Confidence 5555554432 234555555555555555555555555555555655555555555554 4555566666666555432
Q ss_pred CCcccccccccccccccccccccCCccccCccccCeEeccCCcccccCCCCCCCCCcccccccCCccccC
Q 002021 536 PNSFGDLISLKFLNLSNNNLSGVIPASLEKLSYLEDLNLSFNQLEGKIPRGGSFGNFSAQSFEGNELLCG 605 (979)
Q Consensus 536 p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~~~~~~~~~~N~~~c~ 605 (979)
+ +..+++|+.|+|++|+|++.+| .+..+++|+.|+|++|++++.++....++.+..+.+.+|++.|+
T Consensus 186 ~--~~~l~~L~~L~Ls~N~l~~~~~-~~~~l~~L~~L~Ls~N~l~~lp~~l~~l~~L~~L~l~~N~l~c~ 252 (487)
T 3oja_A 186 G--QVVFAKLKTLDLSSNKLAFMGP-EFQSAAGVTWISLRNNKLVLIEKALRFSQNLEHFDLRGNGFHCG 252 (487)
T ss_dssp C--CCCCTTCCEEECCSSCCCEECG-GGGGGTTCSEEECTTSCCCEECTTCCCCTTCCEEECTTCCBCHH
T ss_pred c--cccCCCCCEEECCCCCCCCCCH-hHcCCCCccEEEecCCcCcccchhhccCCCCCEEEcCCCCCcCc
Confidence 2 2235555566666665554332 35555556666666665554333333344555555555655554
No 317
>2p1m_B Transport inhibitor response 1 protein; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_B* 2p1o_B* 2p1p_B* 2p1q_B* 3c6n_B* 3c6o_B* 3c6p_B*
Probab=99.95 E-value=1.8e-31 Score=321.75 Aligned_cols=461 Identities=16% Similarity=0.159 Sum_probs=226.6
Q ss_pred CCccceeEeeCCCCcEEEEEecCCCccccCC-CCCcCCCCCCeeeccCCcccc---cCCccccccCcccEEecccccccc
Q 002021 59 VCNWTGVACEVHSQRVTVLNISSLNLTGTIP-SQLGNLSSLQSLNLSFNRLFG---SIPSAIFTTYTLKYVCLRGNQLSG 134 (979)
Q Consensus 59 ~c~w~gv~c~~~~~~v~~l~l~~~~l~g~~~-~~l~~l~~L~~L~L~~n~~~~---~~p~~~~~l~~L~~L~L~~n~l~~ 134 (979)
|++|+++.. .....++++... +..| ..+..+++|++|+|+++.... ..|..++. ....
T Consensus 34 ck~W~~~~~----~~~~~l~~~~~~--~~~~~~~~~~~~~L~~L~L~~~~~~~~~~l~~~~~~~------------~~~~ 95 (594)
T 2p1m_B 34 CKSWYEIER----WCRRKVFIGNCY--AVSPATVIRRFPKVRSVELKGKPHFADFNLVPDGWGG------------YVYP 95 (594)
T ss_dssp CHHHHHHHH----HHCCEEEESSTT--SSCHHHHHHHCTTCCEEEEECSCGGGGGTCSCTTSCC------------BCHH
T ss_pred HHHHHHhhh----hhceEEeecccc--ccCHHHHHhhCCCceEEeccCCCchhhcccccccccc------------hhhH
Confidence 457888821 123355655432 2223 245677888999998875321 12221100 0000
Q ss_pred cCCccccCCCCCcEEEccCCccCchhhhhhhccCCcccC-CCCccceeecccc-ccccc-ccccccCCCCCCceecCCCe
Q 002021 135 TFPSFISNKSSLQHLDLSSNALSGEIRANICREIPREFG-NLPELELMSLAAN-NLQGK-IPLKIGNLRNLEKLDIGDNK 211 (979)
Q Consensus 135 ~~p~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~~ip~~l~-~l~~L~~L~L~~N-~l~~~-~p~~~~~l~~L~~L~Ls~N~ 211 (979)
.++.....+++|++|+|++|.+++... ..+. .+++|++|+|++| .++.. ++..+.++++|++|+|++|.
T Consensus 96 ~l~~l~~~~~~L~~L~L~~~~~~~~~~--------~~l~~~~~~L~~L~L~~~~~~~~~~l~~~~~~~~~L~~L~L~~~~ 167 (594)
T 2p1m_B 96 WIEAMSSSYTWLEEIRLKRMVVTDDCL--------ELIAKSFKNFKVLVLSSCEGFSTDGLAAIAATCRNLKELDLRESD 167 (594)
T ss_dssp HHHHHHHHCTTCCEEEEESCBCCHHHH--------HHHHHHCTTCCEEEEESCEEEEHHHHHHHHHHCTTCCEEECTTCE
T ss_pred HHHHHHHhCCCCCeEEeeCcEEcHHHH--------HHHHHhCCCCcEEeCCCcCCCCHHHHHHHHHhCCCCCEEeCcCCc
Confidence 111122344555555555555544321 1121 3455555555555 33321 33333456666666666666
Q ss_pred eeecCCcccc----ccCccceeeccCCC--CcCCCcccccCCCCCcCEEEccCC-ccccccCcccccCCCCcEEecccc-
Q 002021 212 LVGIAPIAIF----NVSTLKILGLQDNS--LSGCLSSIGYARLPNLEILSLWGN-NFSGTIPRFIFNASKLSILDLEGN- 283 (979)
Q Consensus 212 l~~~~p~~l~----~l~~L~~L~L~~N~--l~~~~~~~~~~~l~~L~~L~L~~N-~l~~~~p~~l~~l~~L~~L~Ls~N- 283 (979)
+++..+..+. .+++|+.|++++|. ++..........+++|++|+|++| .+.+ +|..+..+++|++|+++.+
T Consensus 168 i~~~~~~~l~~~~~~~~~L~~L~l~~~~~~~~~~~l~~l~~~~~~L~~L~L~~~~~~~~-l~~~~~~~~~L~~L~l~~~~ 246 (594)
T 2p1m_B 168 VDDVSGHWLSHFPDTYTSLVSLNISCLASEVSFSALERLVTRCPNLKSLKLNRAVPLEK-LATLLQRAPQLEELGTGGYT 246 (594)
T ss_dssp EECCCGGGGGGSCTTCCCCCEEECTTCCSCCCHHHHHHHHHHCTTCCEEECCTTSCHHH-HHHHHHHCTTCSEEECSBCC
T ss_pred cCCcchHHHHHHhhcCCcCcEEEecccCCcCCHHHHHHHHHhCCCCcEEecCCCCcHHH-HHHHHhcCCcceEccccccc
Confidence 6654443333 34455666665554 111000111233566777777666 3333 5666666677777764333
Q ss_pred ------ccccccCccccccccccce-eccccccccccchhhhhhcccCCCCccEEEccCCCCcccCCccccccccccccE
Q 002021 284 ------SFSGFIPNTFGNLRNLSWL-VLSDNYLTSSTQELSFLSSLSNCKFLKYFDLSYNPLYRILPRTTVGNLSHSLEE 356 (979)
Q Consensus 284 ------~l~~~~~~~~~~l~~L~~L-~Ls~N~l~~~~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~~L~~ 356 (979)
.+.+. +..+.++++|+.| .+.+.....++ ..+..+++|++|++++|.+....
T Consensus 247 ~~~~~~~~~~l-~~~l~~~~~L~~Ls~~~~~~~~~l~------~~~~~~~~L~~L~L~~~~l~~~~-------------- 305 (594)
T 2p1m_B 247 AEVRPDVYSGL-SVALSGCKELRCLSGFWDAVPAYLP------AVYSVCSRLTTLNLSYATVQSYD-------------- 305 (594)
T ss_dssp CCCCHHHHHHH-HHHHHTCTTCCEEECCBTCCGGGGG------GGHHHHTTCCEEECTTCCCCHHH--------------
T ss_pred CccchhhHHHH-HHHHhcCCCcccccCCcccchhhHH------HHHHhhCCCCEEEccCCCCCHHH--------------
Confidence 33332 2245555555555 23222111111 01123444555555555432211
Q ss_pred EEccCccccCCCCccccCCCcccEEEecCCCCCchhH-HhhhcCCCCcEEEecC---------cccCCCcccccc-CCCC
Q 002021 357 FKMSNCNISGGIPEEISNLTNLRTIYLGGNKLNGSIL-ITLSKLQKLQDLGLKD---------NKLEGSIPYDIC-NLAE 425 (979)
Q Consensus 357 L~L~~n~i~~~~p~~l~~l~~L~~L~L~~N~l~~~~~-~~l~~l~~L~~L~L~~---------N~l~~~~p~~~~-~l~~ 425 (979)
++..+..+++|++|++++| +..... .....+++|++|++++ +.+++.....+. .+++
T Consensus 306 -----------l~~~~~~~~~L~~L~l~~~-~~~~~l~~l~~~~~~L~~L~L~~~~~~g~~~~~~l~~~~l~~l~~~~~~ 373 (594)
T 2p1m_B 306 -----------LVKLLCQCPKLQRLWVLDY-IEDAGLEVLASTCKDLRELRVFPSEPFVMEPNVALTEQGLVSVSMGCPK 373 (594)
T ss_dssp -----------HHHHHTTCTTCCEEEEEGG-GHHHHHHHHHHHCTTCCEEEEECSCTTCSSCSSCCCHHHHHHHHHHCTT
T ss_pred -----------HHHHHhcCCCcCEEeCcCc-cCHHHHHHHHHhCCCCCEEEEecCcccccccCCCCCHHHHHHHHHhchh
Confidence 1112334555555555555 322222 2223455566665522 233322222222 2555
Q ss_pred CceEecCCCcccccCCcccc-CCCcCceEecC--C----Cccccccc------cccCcCCCcEEEeccccccCCCccccc
Q 002021 426 LYRLDLDGNKLSGSIPACFS-NLTSLRIVSLG--S----NELTSIPL------TFWNLKDILNLNFSSNFLTGSLPLEIG 492 (979)
Q Consensus 426 L~~L~Ls~N~l~~~~~~~~~-~l~~L~~L~L~--~----N~l~~lp~------~~~~l~~L~~L~ls~N~l~~~~p~~~~ 492 (979)
|+.|+++.|.+++..+..+. .+++|+.|+++ + |.++..|. .+..+++|+.|++++ .+++..+..++
T Consensus 374 L~~L~~~~~~l~~~~~~~l~~~~~~L~~L~L~~~~~~~~~~l~~~~~~~~~~~l~~~~~~L~~L~L~~-~l~~~~~~~l~ 452 (594)
T 2p1m_B 374 LESVLYFCRQMTNAALITIARNRPNMTRFRLCIIEPKAPDYLTLEPLDIGFGAIVEHCKDLRRLSLSG-LLTDKVFEYIG 452 (594)
T ss_dssp CCEEEEEESCCCHHHHHHHHHHCTTCCEEEEEESSTTCCCTTTCCCTHHHHHHHHHHCTTCCEEECCS-SCCHHHHHHHH
T ss_pred HHHHHHhcCCcCHHHHHHHHhhCCCcceeEeecccCCCcccccCCchhhHHHHHHhhCCCccEEeecC-cccHHHHHHHH
Confidence 66666655665544443343 35666666666 3 44553322 244566777777765 55544444444
Q ss_pred c-ccccceEeccCCccCcccchhh-cCCcccceeecCCccccCCCCC-cccccccccccccccccccccCCccc-cCccc
Q 002021 493 S-LKVLVGIDLSRNNFSGVIPTEI-GGLKNLEYLFLGYNRLQGSIPN-SFGDLISLKFLNLSNNNLSGVIPASL-EKLSY 568 (979)
Q Consensus 493 ~-l~~L~~L~Ls~N~l~~~~p~~~-~~l~~L~~L~Ls~N~l~~~~p~-~~~~l~~L~~L~Ls~N~l~~~~p~~~-~~l~~ 568 (979)
. +++|+.|+|++|.+++..+..+ .++++|+.|+|++|.+++..+. .+..+++|+.|++++|+++......+ ..+++
T Consensus 453 ~~~~~L~~L~L~~~~i~~~~~~~l~~~~~~L~~L~L~~n~~~~~~~~~~~~~l~~L~~L~l~~~~~~~~~~~~l~~~lp~ 532 (594)
T 2p1m_B 453 TYAKKMEMLSVAFAGDSDLGMHHVLSGCDSLRKLEIRDCPFGDKALLANASKLETMRSLWMSSCSVSFGACKLLGQKMPK 532 (594)
T ss_dssp HHCTTCCEEEEESCCSSHHHHHHHHHHCTTCCEEEEESCSCCHHHHHHTGGGGGGSSEEEEESSCCBHHHHHHHHHHCTT
T ss_pred HhchhccEeeccCCCCcHHHHHHHHhcCCCcCEEECcCCCCcHHHHHHHHHhCCCCCEEeeeCCCCCHHHHHHHHHhCCC
Confidence 4 6677777777777766555554 5677778888887777543332 33457778888888877753333333 44566
Q ss_pred cCeEeccCCccc
Q 002021 569 LEDLNLSFNQLE 580 (979)
Q Consensus 569 L~~L~L~~N~l~ 580 (979)
|+...+..+.-.
T Consensus 533 l~i~~~~~~~~~ 544 (594)
T 2p1m_B 533 LNVEVIDERGAP 544 (594)
T ss_dssp EEEEEECSSSCG
T ss_pred CEEEEecCCCcc
Confidence 666566555443
No 318
>3o53_A Protein LRIM1, AGAP006348-PA; leucine-rich repeat, protein binding; HET: NAG; 2.00A {Anopheles gambiae}
Probab=99.95 E-value=4.4e-29 Score=275.10 Aligned_cols=268 Identities=23% Similarity=0.197 Sum_probs=135.0
Q ss_pred cceeeccCCCCcCCCcccccCCCCCcCEEEccCCccccccCcccccCCCCcEEeccccccccccCccccccccccceecc
Q 002021 226 LKILGLQDNSLSGCLSSIGYARLPNLEILSLWGNNFSGTIPRFIFNASKLSILDLEGNSFSGFIPNTFGNLRNLSWLVLS 305 (979)
Q Consensus 226 L~~L~L~~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls 305 (979)
++.++++.+.+...... .+..+++|++|+|++|++++..|..+..+++|++|+|++|.+++..+ |..+++|++|+|+
T Consensus 12 l~i~~ls~~~l~~~~~~-~~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~--~~~l~~L~~L~Ls 88 (317)
T 3o53_A 12 YKIEKVTDSSLKQALAS-LRQSAWNVKELDLSGNPLSQISAADLAPFTKLELLNLSSNVLYETLD--LESLSTLRTLDLN 88 (317)
T ss_dssp EEEESCCTTTHHHHHHH-HHTTGGGCSEEECTTSCCCCCCHHHHTTCTTCCEEECTTSCCEEEEE--ETTCTTCCEEECC
T ss_pred eeEeeccccchhhhHHH-HhccCCCCCEEECcCCccCcCCHHHhhCCCcCCEEECCCCcCCcchh--hhhcCCCCEEECc
Confidence 44445555555433222 23445566666666666665555555666666666666666654433 5555555555555
Q ss_pred ccccccccchhhhhhcccCCCCccEEEccCCCCcccCCccccccccccccEEEccCccccCCCCccccCCCcccEEEecC
Q 002021 306 DNYLTSSTQELSFLSSLSNCKFLKYFDLSYNPLYRILPRTTVGNLSHSLEEFKMSNCNISGGIPEEISNLTNLRTIYLGG 385 (979)
Q Consensus 306 ~N~l~~~~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~~L~~L~L~~n~i~~~~p~~l~~l~~L~~L~L~~ 385 (979)
+|++++++ .+++|++|++++|+ +++..+.. +++|++|++++
T Consensus 89 ~n~l~~l~----------~~~~L~~L~l~~n~--------------------------l~~~~~~~---~~~L~~L~l~~ 129 (317)
T 3o53_A 89 NNYVQELL----------VGPSIETLHAANNN--------------------------ISRVSCSR---GQGKKNIYLAN 129 (317)
T ss_dssp SSEEEEEE----------ECTTCCEEECCSSC--------------------------CSEEEECC---CSSCEEEECCS
T ss_pred CCcccccc----------CCCCcCEEECCCCc--------------------------cCCcCccc---cCCCCEEECCC
Confidence 55554432 12334444444444 33322221 33455555555
Q ss_pred CCCCchhHHhhhcCCCCcEEEecCcccCCCcccccc-CCCCCceEecCCCcccccCCccccCCCcCceEecCCCcccccc
Q 002021 386 NKLNGSILITLSKLQKLQDLGLKDNKLEGSIPYDIC-NLAELYRLDLDGNKLSGSIPACFSNLTSLRIVSLGSNELTSIP 464 (979)
Q Consensus 386 N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~-~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~lp 464 (979)
|++++..+..+..+++|++|++++|.+.+..+..+. .+++|++|+|++|++ +.+|
T Consensus 130 N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~l------------------------~~~~ 185 (317)
T 3o53_A 130 NKITMLRDLDEGCRSRVQYLDLKLNEIDTVNFAELAASSDTLEHLNLQYNFI------------------------YDVK 185 (317)
T ss_dssp SCCCSGGGBCTGGGSSEEEEECTTSCCCEEEGGGGGGGTTTCCEEECTTSCC------------------------CEEE
T ss_pred CCCCCccchhhhccCCCCEEECCCCCCCcccHHHHhhccCcCCEEECCCCcC------------------------cccc
Confidence 555444444444444444444444444433333332 344444444444444 4333
Q ss_pred ccccCcCCCcEEEeccccccCCCccccccccccceEeccCCccCcccchhhcCCcccceeecCCcccc-CCCCCcccccc
Q 002021 465 LTFWNLKDILNLNFSSNFLTGSLPLEIGSLKVLVGIDLSRNNFSGVIPTEIGGLKNLEYLFLGYNRLQ-GSIPNSFGDLI 543 (979)
Q Consensus 465 ~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~-~~~p~~~~~l~ 543 (979)
.. ..+++|+.|++++|++++ +|..+..+++|+.|+|++|+|+ .+|..+..+++|+.|+|++|+++ +.+|..+..++
T Consensus 186 ~~-~~l~~L~~L~Ls~N~l~~-l~~~~~~l~~L~~L~L~~N~l~-~l~~~~~~l~~L~~L~l~~N~~~~~~~~~~~~~~~ 262 (317)
T 3o53_A 186 GQ-VVFAKLKTLDLSSNKLAF-MGPEFQSAAGVTWISLRNNKLV-LIEKALRFSQNLEHFDLRGNGFHCGTLRDFFSKNQ 262 (317)
T ss_dssp CC-CCCTTCCEEECCSSCCCE-ECGGGGGGTTCSEEECTTSCCC-EECTTCCCCTTCCEEECTTCCCBHHHHHHHHHTCH
T ss_pred cc-cccccCCEEECCCCcCCc-chhhhcccCcccEEECcCCccc-chhhHhhcCCCCCEEEccCCCccCcCHHHHHhccc
Confidence 21 124444444444444443 2223555555666666666665 34555666666666666666666 55666666777
Q ss_pred cccccccc-cccccccCCcc
Q 002021 544 SLKFLNLS-NNNLSGVIPAS 562 (979)
Q Consensus 544 ~L~~L~Ls-~N~l~~~~p~~ 562 (979)
+|+.|+++ .+.+++..|..
T Consensus 263 ~L~~l~l~~~~~l~~~~~~~ 282 (317)
T 3o53_A 263 RVQTVAKQTVKKLTGQNEEE 282 (317)
T ss_dssp HHHHHHHHHHHHHHSSSSCC
T ss_pred cceEEECCCchhccCCchhc
Confidence 77777777 34555555443
No 319
>3g06_A SSPH2 (leucine-rich repeat protein); E3 ubiquitin ligase, leucine rich repeat domain, type three effector, salmonella virulence factor; 1.90A {Salmonella typhimurium}
Probab=99.95 E-value=2.7e-27 Score=281.28 Aligned_cols=268 Identities=23% Similarity=0.264 Sum_probs=139.3
Q ss_pred ccceeeccCCCCcCCCcccccCCCCCcCEEEccCCccccccCcccccCCCCcEEeccccccccccCccccccccccceec
Q 002021 225 TLKILGLQDNSLSGCLSSIGYARLPNLEILSLWGNNFSGTIPRFIFNASKLSILDLEGNSFSGFIPNTFGNLRNLSWLVL 304 (979)
Q Consensus 225 ~L~~L~L~~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L 304 (979)
+++.|++++|.|+.++... .++|++|+|++|+|+ .+|. .+++|++|+|++|+|++ +|. .+++|++|+|
T Consensus 41 ~l~~L~ls~n~L~~lp~~l----~~~L~~L~L~~N~l~-~lp~---~l~~L~~L~Ls~N~l~~-lp~---~l~~L~~L~L 108 (622)
T 3g06_A 41 GNAVLNVGESGLTTLPDCL----PAHITTLVIPDNNLT-SLPA---LPPELRTLEVSGNQLTS-LPV---LPPGLLELSI 108 (622)
T ss_dssp CCCEEECCSSCCSCCCSCC----CTTCSEEEECSCCCS-CCCC---CCTTCCEEEECSCCCSC-CCC---CCTTCCEEEE
T ss_pred CCcEEEecCCCcCccChhh----CCCCcEEEecCCCCC-CCCC---cCCCCCEEEcCCCcCCc-CCC---CCCCCCEEEC
Confidence 4566666666665443321 145555555555555 3333 34555555555555553 222 3445555555
Q ss_pred cccccccccchhhhhhcccCCCCccEEEccCCCCcccCCccccccccccccEEEccCccccCCCCccccCCCcccEEEec
Q 002021 305 SDNYLTSSTQELSFLSSLSNCKFLKYFDLSYNPLYRILPRTTVGNLSHSLEEFKMSNCNISGGIPEEISNLTNLRTIYLG 384 (979)
Q Consensus 305 s~N~l~~~~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~~L~~L~L~~n~i~~~~p~~l~~l~~L~~L~L~ 384 (979)
++|+++.++. .++ +|+.|++++|+|++ +|.. +++|++|+|+
T Consensus 109 s~N~l~~l~~---------~l~--------------------------~L~~L~L~~N~l~~-lp~~---l~~L~~L~Ls 149 (622)
T 3g06_A 109 FSNPLTHLPA---------LPS--------------------------GLCKLWIFGNQLTS-LPVL---PPGLQELSVS 149 (622)
T ss_dssp CSCCCCCCCC---------CCT--------------------------TCCEEECCSSCCSC-CCCC---CTTCCEEECC
T ss_pred cCCcCCCCCC---------CCC--------------------------CcCEEECCCCCCCc-CCCC---CCCCCEEECc
Confidence 5555544332 123 44444444444443 2221 2455555555
Q ss_pred CCCCCchhHHhhhcCCCCcEEEecCcccCCCccccccCCCCCceEecCCCcccccCCccccCCCcCceEecCCCcccccc
Q 002021 385 GNKLNGSILITLSKLQKLQDLGLKDNKLEGSIPYDICNLAELYRLDLDGNKLSGSIPACFSNLTSLRIVSLGSNELTSIP 464 (979)
Q Consensus 385 ~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~lp 464 (979)
+|++++... .+++|+.|++++|.+++ +| ..+++|+.|++++|+|++ +|.. +++|+.|++++|.++.+|
T Consensus 150 ~N~l~~l~~----~~~~L~~L~L~~N~l~~-l~---~~~~~L~~L~Ls~N~l~~-l~~~---~~~L~~L~L~~N~l~~l~ 217 (622)
T 3g06_A 150 DNQLASLPA----LPSELCKLWAYNNQLTS-LP---MLPSGLQELSVSDNQLAS-LPTL---PSELYKLWAYNNRLTSLP 217 (622)
T ss_dssp SSCCSCCCC----CCTTCCEEECCSSCCSC-CC---CCCTTCCEEECCSSCCSC-CCCC---CTTCCEEECCSSCCSSCC
T ss_pred CCcCCCcCC----ccCCCCEEECCCCCCCC-Cc---ccCCCCcEEECCCCCCCC-CCCc---cchhhEEECcCCcccccC
Confidence 555553221 23455555555555553 33 334566666666666653 2322 355666666666666665
Q ss_pred ccccCcCCCcEEEeccccccCCCccccccccccceEeccCCccCcccchhhcCCcccceeecCCccccCCCCCccccccc
Q 002021 465 LTFWNLKDILNLNFSSNFLTGSLPLEIGSLKVLVGIDLSRNNFSGVIPTEIGGLKNLEYLFLGYNRLQGSIPNSFGDLIS 544 (979)
Q Consensus 465 ~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~ 544 (979)
.. +++|+.|++++|+|++ +| ..+++|+.|+|++|+|+. +|. .+++|+.|+|++|+|+ .+|..|.++++
T Consensus 218 ~~---~~~L~~L~Ls~N~L~~-lp---~~l~~L~~L~Ls~N~L~~-lp~---~~~~L~~L~Ls~N~L~-~lp~~l~~l~~ 285 (622)
T 3g06_A 218 AL---PSGLKELIVSGNRLTS-LP---VLPSELKELMVSGNRLTS-LPM---LPSGLLSLSVYRNQLT-RLPESLIHLSS 285 (622)
T ss_dssp CC---CTTCCEEECCSSCCSC-CC---CCCTTCCEEECCSSCCSC-CCC---CCTTCCEEECCSSCCC-SCCGGGGGSCT
T ss_pred CC---CCCCCEEEccCCccCc-CC---CCCCcCcEEECCCCCCCc-CCc---ccccCcEEeCCCCCCC-cCCHHHhhccc
Confidence 42 2556666666666654 33 334556666666666653 333 3455666666666666 45555666666
Q ss_pred ccccccccccccccCCccccCcc
Q 002021 545 LKFLNLSNNNLSGVIPASLEKLS 567 (979)
Q Consensus 545 L~~L~Ls~N~l~~~~p~~~~~l~ 567 (979)
|+.|+|++|++++.+|..+..++
T Consensus 286 L~~L~L~~N~l~~~~~~~l~~L~ 308 (622)
T 3g06_A 286 ETTVNLEGNPLSERTLQALREIT 308 (622)
T ss_dssp TCEEECCSCCCCHHHHHHHHHHH
T ss_pred cCEEEecCCCCCCcCHHHHHhcc
Confidence 66666666666665555554443
No 320
>3o53_A Protein LRIM1, AGAP006348-PA; leucine-rich repeat, protein binding; HET: NAG; 2.00A {Anopheles gambiae}
Probab=99.95 E-value=1e-28 Score=272.08 Aligned_cols=269 Identities=20% Similarity=0.190 Sum_probs=197.5
Q ss_pred CCCceecCCCeeeecCCccccccCccceeeccCCCCcCCCcccccCCCCCcCEEEccCCccccccCcccccCCCCcEEec
Q 002021 201 NLEKLDIGDNKLVGIAPIAIFNVSTLKILGLQDNSLSGCLSSIGYARLPNLEILSLWGNNFSGTIPRFIFNASKLSILDL 280 (979)
Q Consensus 201 ~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L 280 (979)
+++.++++.+.+....+..+..+++|+.|+|++|++++..+. .|..+++|++|+|++|++++..+ +..+++|++|+|
T Consensus 11 ~l~i~~ls~~~l~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~-~~~~l~~L~~L~Ls~n~l~~~~~--~~~l~~L~~L~L 87 (317)
T 3o53_A 11 RYKIEKVTDSSLKQALASLRQSAWNVKELDLSGNPLSQISAA-DLAPFTKLELLNLSSNVLYETLD--LESLSTLRTLDL 87 (317)
T ss_dssp EEEEESCCTTTHHHHHHHHHTTGGGCSEEECTTSCCCCCCHH-HHTTCTTCCEEECTTSCCEEEEE--ETTCTTCCEEEC
T ss_pred ceeEeeccccchhhhHHHHhccCCCCCEEECcCCccCcCCHH-HhhCCCcCCEEECCCCcCCcchh--hhhcCCCCEEEC
Confidence 456678888888877777777888999999999999986543 57899999999999999997665 889999999999
Q ss_pred cccccccccCccccccccccceeccccccccccchhhhhhcccCCCCccEEEccCCCCcccCCccccccccccccEEEcc
Q 002021 281 EGNSFSGFIPNTFGNLRNLSWLVLSDNYLTSSTQELSFLSSLSNCKFLKYFDLSYNPLYRILPRTTVGNLSHSLEEFKMS 360 (979)
Q Consensus 281 s~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~~L~~L~L~ 360 (979)
++|++++.. ..++|++|++++|+++..+.. .+++ |++|+++
T Consensus 88 s~n~l~~l~-----~~~~L~~L~l~~n~l~~~~~~--------~~~~--------------------------L~~L~l~ 128 (317)
T 3o53_A 88 NNNYVQELL-----VGPSIETLHAANNNISRVSCS--------RGQG--------------------------KKNIYLA 128 (317)
T ss_dssp CSSEEEEEE-----ECTTCCEEECCSSCCSEEEEC--------CCSS--------------------------CEEEECC
T ss_pred cCCcccccc-----CCCCcCEEECCCCccCCcCcc--------ccCC--------------------------CCEEECC
Confidence 999998654 348999999999999876532 1333 5555555
Q ss_pred CccccCCCCccccCCCcccEEEecCCCCCchhHHhh-hcCCCCcEEEecCcccCCCccccccCCCCCceEecCCCccccc
Q 002021 361 NCNISGGIPEEISNLTNLRTIYLGGNKLNGSILITL-SKLQKLQDLGLKDNKLEGSIPYDICNLAELYRLDLDGNKLSGS 439 (979)
Q Consensus 361 ~n~i~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~l-~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~ 439 (979)
+|++++..+..++.+++|++|+|++|++++..+..+ ..+++|++|++++|.+++. + ....+++|++|+|++|++++.
T Consensus 129 ~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~-~-~~~~l~~L~~L~Ls~N~l~~l 206 (317)
T 3o53_A 129 NNKITMLRDLDEGCRSRVQYLDLKLNEIDTVNFAELAASSDTLEHLNLQYNFIYDV-K-GQVVFAKLKTLDLSSNKLAFM 206 (317)
T ss_dssp SSCCCSGGGBCTGGGSSEEEEECTTSCCCEEEGGGGGGGTTTCCEEECTTSCCCEE-E-CCCCCTTCCEEECCSSCCCEE
T ss_pred CCCCCCccchhhhccCCCCEEECCCCCCCcccHHHHhhccCcCCEEECCCCcCccc-c-cccccccCCEEECCCCcCCcc
Confidence 555665566678888999999999999998877776 4789999999999998854 3 223366677777777766643
Q ss_pred CCccccCCCcCceEecCCCccccccccccCcCCCcEEEeccccccCCCccccccccccceEeccCCccC-cccchhhcCC
Q 002021 440 IPACFSNLTSLRIVSLGSNELTSIPLTFWNLKDILNLNFSSNFLTGSLPLEIGSLKVLVGIDLSRNNFS-GVIPTEIGGL 518 (979)
Q Consensus 440 ~~~~~~~l~~L~~L~L~~N~l~~lp~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~-~~~p~~~~~l 518 (979)
|..+..+++|++|+|++|+++.+|.. +..+++|+.|++++|.++ +.+|..+..+
T Consensus 207 -~~~~~~l~~L~~L~L~~N~l~~l~~~------------------------~~~l~~L~~L~l~~N~~~~~~~~~~~~~~ 261 (317)
T 3o53_A 207 -GPEFQSAAGVTWISLRNNKLVLIEKA------------------------LRFSQNLEHFDLRGNGFHCGTLRDFFSKN 261 (317)
T ss_dssp -CGGGGGGTTCSEEECTTSCCCEECTT------------------------CCCCTTCCEEECTTCCCBHHHHHHHHHTC
T ss_pred -hhhhcccCcccEEECcCCcccchhhH------------------------hhcCCCCCEEEccCCCccCcCHHHHHhcc
Confidence 33355666666666666666555544 444555666666666665 5666777777
Q ss_pred cccceeecC-CccccCCCCCc
Q 002021 519 KNLEYLFLG-YNRLQGSIPNS 538 (979)
Q Consensus 519 ~~L~~L~Ls-~N~l~~~~p~~ 538 (979)
++|+.|+++ .+.++|..|..
T Consensus 262 ~~L~~l~l~~~~~l~~~~~~~ 282 (317)
T 3o53_A 262 QRVQTVAKQTVKKLTGQNEEE 282 (317)
T ss_dssp HHHHHHHHHHHHHHHSSSSCC
T ss_pred ccceEEECCCchhccCCchhc
Confidence 777777777 44566555543
No 321
>2o6q_A Variable lymphocyte receptor A; leucine-rich repeat protein, LRR, immune system; 2.50A {Eptatretus burgeri}
Probab=99.94 E-value=1.7e-26 Score=248.16 Aligned_cols=218 Identities=24% Similarity=0.310 Sum_probs=143.7
Q ss_pred CCCCccceeEeeCCCCcEEEEEecCCCccccCCCCCcCCCCCCeeeccCCcccccCCccccccCcccEEecccccccccC
Q 002021 57 TPVCNWTGVACEVHSQRVTVLNISSLNLTGTIPSQLGNLSSLQSLNLSFNRLFGSIPSAIFTTYTLKYVCLRGNQLSGTF 136 (979)
Q Consensus 57 ~~~c~w~gv~c~~~~~~v~~l~l~~~~l~g~~~~~l~~l~~L~~L~L~~n~~~~~~p~~~~~l~~L~~L~L~~n~l~~~~ 136 (979)
.++|.|.|+.|... ..++.+++++++++ .+|..+. ++|++|+|++|++++..|.++..+++|++|+|++|+++...
T Consensus 2 ~~~C~~~~~~C~c~-~~~~~l~~~~~~l~-~ip~~~~--~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~i~ 77 (270)
T 2o6q_A 2 EALCKKDGGVCSCN-NNKNSVDCSSKKLT-AIPSNIP--ADTKKLDLQSNKLSSLPSKAFHRLTKLRLLYLNDNKLQTLP 77 (270)
T ss_dssp CCCBGGGTCSBEEE-TTTTEEECTTSCCS-SCCSCCC--TTCSEEECCSSCCSCCCTTSSSSCTTCCEEECCSSCCSCCC
T ss_pred CccCCCCCCCCEeC-CCCCEEEccCCCCC-ccCCCCC--CCCCEEECcCCCCCeeCHHHhcCCCCCCEEECCCCccCeeC
Confidence 47899999999753 34567888988888 4676554 67888888888888666667777888888888888887655
Q ss_pred CccccCCCCCcEEEccCCccCchhhhhhhccCCcccCCCCccceeecccccccccccccccCCCCCCceecCCCeeeecC
Q 002021 137 PSFISNKSSLQHLDLSSNALSGEIRANICREIPREFGNLPELELMSLAANNLQGKIPLKIGNLRNLEKLDIGDNKLVGIA 216 (979)
Q Consensus 137 p~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~~ip~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~ 216 (979)
+..+.++++|++|+|++|.+++. .+..|.++++|++|+|++|++++..+..|+.+++|++|+|++|+++++.
T Consensus 78 ~~~~~~l~~L~~L~l~~n~l~~~--------~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~ 149 (270)
T 2o6q_A 78 AGIFKELKNLETLWVTDNKLQAL--------PIGVFDQLVNLAELRLDRNQLKSLPPRVFDSLTKLTYLSLGYNELQSLP 149 (270)
T ss_dssp TTTTSSCTTCCEEECCSSCCCCC--------CTTTTTTCSSCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCC
T ss_pred hhhhcCCCCCCEEECCCCcCCcC--------CHhHcccccCCCEEECCCCccCeeCHHHhCcCcCCCEEECCCCcCCccC
Confidence 55667777777777777777642 2344566777777777777777666666666777777777777666665
Q ss_pred CccccccCccceeeccCCCCcCCCcccccCCCCCcCEEEccCCccccccCcccccCCCCcEEeccccccccccCcccccc
Q 002021 217 PIAIFNVSTLKILGLQDNSLSGCLSSIGYARLPNLEILSLWGNNFSGTIPRFIFNASKLSILDLEGNSFSGFIPNTFGNL 296 (979)
Q Consensus 217 p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l 296 (979)
+..|..+++|+.|+|++|++++ ..+..+..+++|++|+|++|++++..+..|..+
T Consensus 150 ~~~~~~l~~L~~L~L~~n~l~~-------------------------~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l 204 (270)
T 2o6q_A 150 KGVFDKLTSLKELRLYNNQLKR-------------------------VPEGAFDKLTELKTLKLDNNQLKRVPEGAFDSL 204 (270)
T ss_dssp TTTTTTCTTCCEEECCSSCCSC-------------------------CCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTC
T ss_pred HhHccCCcccceeEecCCcCcE-------------------------eChhHhccCCCcCEEECCCCcCCcCCHHHhccc
Confidence 5555555555555555555544 333444455555555555555554444445555
Q ss_pred ccccceecccccccc
Q 002021 297 RNLSWLVLSDNYLTS 311 (979)
Q Consensus 297 ~~L~~L~Ls~N~l~~ 311 (979)
++|+.|+|++|.+..
T Consensus 205 ~~L~~L~l~~N~~~c 219 (270)
T 2o6q_A 205 EKLKMLQLQENPWDC 219 (270)
T ss_dssp TTCCEEECCSSCBCC
T ss_pred cCCCEEEecCCCeeC
Confidence 555555555555543
No 322
>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*
Probab=99.94 E-value=1.2e-28 Score=291.10 Aligned_cols=186 Identities=19% Similarity=0.087 Sum_probs=132.2
Q ss_pred eeeeecceEEEEE-EcCCCcEEEEEEecccc----------ccchhcHHHHHHHHHhc-CCCCeeeEEEeeccCCeeEEE
Q 002021 689 LIGRGGFGSVYKA-SLGDGMEVAVKVFTSQC----------GRAFKSFDVECEIMKSI-RHRNLIKVISSCSNEEFKALV 756 (979)
Q Consensus 689 ~lG~G~~g~Vy~~-~~~~~~~vAvK~~~~~~----------~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lv 756 (979)
..+.|++|.+..+ +...|+.||||++.+.. ....++|.+|+++|+++ .|+||+++++++++++..|||
T Consensus 241 ~~~~~~~~~h~~~rr~~fg~~~~~K~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~ed~~~~yLV 320 (569)
T 4azs_A 241 QPYAGAGLAHKRSRRYFFGEDYVCKFFYYDMPHGILTAEESQRNKYELHNEIKFLTQPPAGFDAPAVLAHGENAQSGWLV 320 (569)
T ss_dssp C-C--------CCEEEEECSSEEEEEEESSCSTTCSCHHHHHHHHHHHHHHHHHHHSCCTTCCCCCEEEEEECSSEEEEE
T ss_pred ccccCCcccccccccccccceeEEEEEecccccccchhhhhHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEECCEEEEE
Confidence 3566677766665 33458889999986542 12345689999999999 799999999999999999999
Q ss_pred EEecCCCccceeeccCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCEEeCCCCcEEEEeeccccccCCCC
Q 002021 757 LEYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFSIAKMLTGED 836 (979)
Q Consensus 757 ~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~i~H~Dik~~NIll~~~~~~kl~Dfg~~~~~~~~~ 836 (979)
|||++|++|.+++.+.+ .+++. +|+.||+.||+|+| ++||+||||||+|||+++++.+||+|||+|+......
T Consensus 321 MEyv~G~~L~d~i~~~~-~l~~~---~I~~QIl~AL~ylH---~~GIIHRDIKPeNILL~~dg~vKL~DFGlAr~~~~~~ 393 (569)
T 4azs_A 321 MEKLPGRLLSDMLAAGE-EIDRE---KILGSLLRSLAALE---KQGFWHDDVRPWNVMVDARQHARLIDFGSIVTTPQDC 393 (569)
T ss_dssp EECCCSEEHHHHHHTTC-CCCHH---HHHHHHHHHHHHHH---HTTCEESCCCGGGEEECTTSCEEECCCTTEESCC---
T ss_pred EecCCCCcHHHHHHhCC-CCCHH---HHHHHHHHHHHHHH---HCCceeccCchHhEEECCCCCEEEeecccCeeCCCCC
Confidence 99999999999998754 46654 58999999999999 9999999999999999999999999999998764322
Q ss_pred CcceecccccCCCCCCccccCCCCCCCchhHHHHHHHHHHHHcCCCCC
Q 002021 837 QSMIQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFTGKKPT 884 (979)
Q Consensus 837 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~tg~~P~ 884 (979)
......+||++|||||++.+ .+..++|+||+|++++++.++..|+
T Consensus 394 --~~~~t~vGTp~YmAPE~l~g-~~~~~~d~~s~g~~~~~l~~~~~~~ 438 (569)
T 4azs_A 394 --SWPTNLVQSFFVFVNELFAE-NKSWNGFWRSAPVHPFNLPQPWSNW 438 (569)
T ss_dssp --CCSHHHHHHHHHHHHHHC------------------CCCCTTHHHH
T ss_pred --ccccCceechhhccHHHhCC-CCCCcccccccccchhhhccccchh
Confidence 22355689999999999864 5677899999999998887765553
No 323
>3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=99.94 E-value=5.1e-27 Score=273.63 Aligned_cols=235 Identities=23% Similarity=0.204 Sum_probs=120.4
Q ss_pred CCcCEEEccCCccccccCcccccCCCCcEEeccccccccccCccccccccccceeccccccccccchhhhhhcccCCCCc
Q 002021 249 PNLEILSLWGNNFSGTIPRFIFNASKLSILDLEGNSFSGFIPNTFGNLRNLSWLVLSDNYLTSSTQELSFLSSLSNCKFL 328 (979)
Q Consensus 249 ~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~l~~l~~L 328 (979)
++|++|+|++|.+++..|..|..+++|++|+|++|.+++..| |+.+++|++|+|++|.|++++. .+
T Consensus 34 ~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~Ls~N~l~~l~~----------~~-- 99 (487)
T 3oja_A 34 WNVKELDLSGNPLSQISAADLAPFTKLELLNLSSNVLYETLD--LESLSTLRTLDLNNNYVQELLV----------GP-- 99 (487)
T ss_dssp GGCCEEECCSSCCCCCCGGGGTTCTTCCEEECTTSCCEEEEE--CTTCTTCCEEECCSSEEEEEEE----------CT--
T ss_pred CCccEEEeeCCcCCCCCHHHHhCCCCCCEEEeeCCCCCCCcc--cccCCCCCEEEecCCcCCCCCC----------CC--
Confidence 356666666666665555555556666666666666555443 5555555555555555544321 13
Q ss_pred cEEEccCCCCcccCCccccccccccccEEEccCccccCCCCccccCCCcccEEEecCCCCCchhHHhhhcCCCCcEEEec
Q 002021 329 KYFDLSYNPLYRILPRTTVGNLSHSLEEFKMSNCNISGGIPEEISNLTNLRTIYLGGNKLNGSILITLSKLQKLQDLGLK 408 (979)
Q Consensus 329 ~~L~Ls~N~l~~~~~~~~~~~l~~~L~~L~L~~n~i~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~ 408 (979)
+|+.|++++|.|++..+. .+++|+.|+|++|.+++..+..+..+++|+.|+++
T Consensus 100 ------------------------~L~~L~L~~N~l~~~~~~---~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls 152 (487)
T 3oja_A 100 ------------------------SIETLHAANNNISRVSCS---RGQGKKNIYLANNKITMLRDLDEGCRSRVQYLDLK 152 (487)
T ss_dssp ------------------------TCCEEECCSSCCCCEEEC---CCSSCEEEECCSSCCCSGGGBCGGGGSSEEEEECT
T ss_pred ------------------------CcCEEECcCCcCCCCCcc---ccCCCCEEECCCCCCCCCCchhhcCCCCCCEEECC
Confidence 344444444444433322 23445555555555555444444444444444444
Q ss_pred CcccCCCcccccc-CCCCCceEecCCCcccccCCccccCCCcCceEecCCCccccccccccCcCCCcEEEeccccccCCC
Q 002021 409 DNKLEGSIPYDIC-NLAELYRLDLDGNKLSGSIPACFSNLTSLRIVSLGSNELTSIPLTFWNLKDILNLNFSSNFLTGSL 487 (979)
Q Consensus 409 ~N~l~~~~p~~~~-~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~lp~~~~~l~~L~~L~ls~N~l~~~~ 487 (979)
+|.+++..|..+. .+++|+.|+|++|.|++..+ +..+++|++|+|++|+|+.+|..
T Consensus 153 ~N~l~~~~~~~l~~~l~~L~~L~Ls~N~l~~~~~--~~~l~~L~~L~Ls~N~l~~~~~~--------------------- 209 (487)
T 3oja_A 153 LNEIDTVNFAELAASSDTLEHLNLQYNFIYDVKG--QVVFAKLKTLDLSSNKLAFMGPE--------------------- 209 (487)
T ss_dssp TSCCCEEEGGGGGGGTTTCCEEECTTSCCCEEEC--CCCCTTCCEEECCSSCCCEECGG---------------------
T ss_pred CCCCCCcChHHHhhhCCcccEEecCCCccccccc--cccCCCCCEEECCCCCCCCCCHh---------------------
Confidence 4444444444443 44555555555555543311 22344444444444444444433
Q ss_pred ccccccccccceEeccCCccCcccchhhcCCcccceeecCCcccc-CCCCCcccccccccccccc
Q 002021 488 PLEIGSLKVLVGIDLSRNNFSGVIPTEIGGLKNLEYLFLGYNRLQ-GSIPNSFGDLISLKFLNLS 551 (979)
Q Consensus 488 p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~-~~~p~~~~~l~~L~~L~Ls 551 (979)
+..+++|+.|+|++|+|++ +|..+..+++|+.|++++|.+. +.+|..+..++.|+.|+++
T Consensus 210 ---~~~l~~L~~L~Ls~N~l~~-lp~~l~~l~~L~~L~l~~N~l~c~~~~~~~~~l~~L~~l~~~ 270 (487)
T 3oja_A 210 ---FQSAAGVTWISLRNNKLVL-IEKALRFSQNLEHFDLRGNGFHCGTLRDFFSKNQRVQTVAKQ 270 (487)
T ss_dssp ---GGGGTTCSEEECTTSCCCE-ECTTCCCCTTCCEEECTTCCBCHHHHHHHHTTCHHHHHHHHH
T ss_pred ---HcCCCCccEEEecCCcCcc-cchhhccCCCCCEEEcCCCCCcCcchHHHHHhCCCCcEEecc
Confidence 4445555555555555553 4445555566666666666665 4455556666666666665
No 324
>2z62_A TOLL-like receptor 4, variable lymphocyte recepto; TLR, VLR hybrid, MD-2, LPS, glycoprotein response, inflammatory response, innate immunity; HET: NAG FUL BMA; 1.70A {Homo sapiens} PDB: 2z65_A* 3ul8_A* 3ula_A* 3ul7_A*
Probab=99.93 E-value=8.6e-26 Score=243.70 Aligned_cols=210 Identities=26% Similarity=0.292 Sum_probs=151.5
Q ss_pred cccEEEecCCCCCchhHHhhhcCCCCcEEEecCcccCCCccccccCCCCCceEecCCCcccccCCccccCCCcCceEecC
Q 002021 377 NLRTIYLGGNKLNGSILITLSKLQKLQDLGLKDNKLEGSIPYDICNLAELYRLDLDGNKLSGSIPACFSNLTSLRIVSLG 456 (979)
Q Consensus 377 ~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~ 456 (979)
+|++|++++|++++..+..|.++++|++|++++|++.+..+..|.++++|++|++++|++++..+..|.++++|++|+++
T Consensus 29 ~l~~L~ls~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~ 108 (276)
T 2z62_A 29 STKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVAV 108 (276)
T ss_dssp TCCEEECTTCCCCEECTTTTTTCTTCSEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECT
T ss_pred CccEEECCCCcccccCHhHhccccCCcEEECCCCcCCccCHHHccCCcCCCEEECCCCccCccChhhhcCCccccEEECC
Confidence 45555555555555555555555555555555555555555556666666666666666666666666666677777777
Q ss_pred CCccccccc-cccCcCCCcEEEeccccccCC-CccccccccccceEeccCCccCcccchhhcCCcccc----eeecCCcc
Q 002021 457 SNELTSIPL-TFWNLKDILNLNFSSNFLTGS-LPLEIGSLKVLVGIDLSRNNFSGVIPTEIGGLKNLE----YLFLGYNR 530 (979)
Q Consensus 457 ~N~l~~lp~-~~~~l~~L~~L~ls~N~l~~~-~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~----~L~Ls~N~ 530 (979)
+|+++.++. .+..+++|+.|++++|++++. +|..++.+++|+.|+|++|++++..+..|..+++|+ .|++++|+
T Consensus 109 ~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~l~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~l~l~L~ls~n~ 188 (276)
T 2z62_A 109 ETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTDLRVLHQMPLLNLSLDLSLNP 188 (276)
T ss_dssp TSCCCCSTTCCCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECCSSCCCEECGGGGHHHHTCTTCCEEEECCSSC
T ss_pred CCCccccCchhcccCCCCCEEECcCCccceecCchhhccCCCCCEEECCCCCCCcCCHHHhhhhhhccccceeeecCCCc
Confidence 776666554 466677777777777777653 477788888888888888888887777888777777 88999999
Q ss_pred ccCCCCCcccccccccccccccccccccCCccccCccccCeEeccCCcccccCCCCC
Q 002021 531 LQGSIPNSFGDLISLKFLNLSNNNLSGVIPASLEKLSYLEDLNLSFNQLEGKIPRGG 587 (979)
Q Consensus 531 l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~ 587 (979)
+++..+..+.. .+|+.|+|++|++++..+..|..+++|+.|+|++|+++|..|...
T Consensus 189 l~~~~~~~~~~-~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~N~~~c~c~~l~ 244 (276)
T 2z62_A 189 MNFIQPGAFKE-IRLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCPRID 244 (276)
T ss_dssp CCEECTTSSCS-CCEEEEECCSSCCSCCCTTTTTTCCSCCEEECCSSCBCCCTTTTH
T ss_pred ccccCccccCC-CcccEEECCCCceeecCHhHhcccccccEEEccCCcccccCCchH
Confidence 98655555544 589999999999998777778999999999999999999887543
No 325
>2p1m_B Transport inhibitor response 1 protein; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_B* 2p1o_B* 2p1p_B* 2p1q_B* 3c6n_B* 3c6o_B* 3c6p_B*
Probab=99.93 E-value=4.3e-28 Score=292.18 Aligned_cols=379 Identities=17% Similarity=0.127 Sum_probs=272.3
Q ss_pred CCCCccceeeccccccccccccccc-CCCCCCceecCCC-eeeec-CCccccccCccceeeccCCCCcCCCcc---cccC
Q 002021 173 GNLPELELMSLAANNLQGKIPLKIG-NLRNLEKLDIGDN-KLVGI-APIAIFNVSTLKILGLQDNSLSGCLSS---IGYA 246 (979)
Q Consensus 173 ~~l~~L~~L~L~~N~l~~~~p~~~~-~l~~L~~L~Ls~N-~l~~~-~p~~l~~l~~L~~L~L~~N~l~~~~~~---~~~~ 246 (979)
..+++|++|+|++|.+++..+..+. .+++|++|+|++| .++.. .+..+.++++|++|+|++|.+++.... ....
T Consensus 102 ~~~~~L~~L~L~~~~~~~~~~~~l~~~~~~L~~L~L~~~~~~~~~~l~~~~~~~~~L~~L~L~~~~i~~~~~~~l~~~~~ 181 (594)
T 2p1m_B 102 SSYTWLEEIRLKRMVVTDDCLELIAKSFKNFKVLVLSSCEGFSTDGLAAIAATCRNLKELDLRESDVDDVSGHWLSHFPD 181 (594)
T ss_dssp HHCTTCCEEEEESCBCCHHHHHHHHHHCTTCCEEEEESCEEEEHHHHHHHHHHCTTCCEEECTTCEEECCCGGGGGGSCT
T ss_pred HhCCCCCeEEeeCcEEcHHHHHHHHHhCCCCcEEeCCCcCCCCHHHHHHHHHhCCCCCEEeCcCCccCCcchHHHHHHhh
Confidence 4678999999999999987777776 7899999999999 56543 344455799999999999998764321 2234
Q ss_pred CCCCcCEEEccCCc--ccc-ccCcccccCCCCcEEecccc-ccccccCccccccccccceeccccccccccchh-hhhhc
Q 002021 247 RLPNLEILSLWGNN--FSG-TIPRFIFNASKLSILDLEGN-SFSGFIPNTFGNLRNLSWLVLSDNYLTSSTQEL-SFLSS 321 (979)
Q Consensus 247 ~l~~L~~L~L~~N~--l~~-~~p~~l~~l~~L~~L~Ls~N-~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~-~~~~~ 321 (979)
.+++|++|++++|. ++. .++..+.++++|++|+|++| .+.+ ++..+..+++|+.|+++.+...-..... .....
T Consensus 182 ~~~~L~~L~l~~~~~~~~~~~l~~l~~~~~~L~~L~L~~~~~~~~-l~~~~~~~~~L~~L~l~~~~~~~~~~~~~~l~~~ 260 (594)
T 2p1m_B 182 TYTSLVSLNISCLASEVSFSALERLVTRCPNLKSLKLNRAVPLEK-LATLLQRAPQLEELGTGGYTAEVRPDVYSGLSVA 260 (594)
T ss_dssp TCCCCCEEECTTCCSCCCHHHHHHHHHHCTTCCEEECCTTSCHHH-HHHHHHHCTTCSEEECSBCCCCCCHHHHHHHHHH
T ss_pred cCCcCcEEEecccCCcCCHHHHHHHHHhCCCCcEEecCCCCcHHH-HHHHHhcCCcceEcccccccCccchhhHHHHHHH
Confidence 77899999999987 321 12333455789999999998 4554 6777888899999986655321000000 11224
Q ss_pred ccCCCCccEEE-ccCCCCcccCCccccccccccccEEEccCccccCCCCccccCCCcccEEEecCCCCCchhHH-hhhcC
Q 002021 322 LSNCKFLKYFD-LSYNPLYRILPRTTVGNLSHSLEEFKMSNCNISGGIPEEISNLTNLRTIYLGGNKLNGSILI-TLSKL 399 (979)
Q Consensus 322 l~~l~~L~~L~-Ls~N~l~~~~~~~~~~~l~~~L~~L~L~~n~i~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~-~l~~l 399 (979)
+.++++|+.|. +.... .+.++..+..+++|++|+|++|.+++.... .+..+
T Consensus 261 l~~~~~L~~Ls~~~~~~---------------------------~~~l~~~~~~~~~L~~L~L~~~~l~~~~l~~~~~~~ 313 (594)
T 2p1m_B 261 LSGCKELRCLSGFWDAV---------------------------PAYLPAVYSVCSRLTTLNLSYATVQSYDLVKLLCQC 313 (594)
T ss_dssp HHTCTTCCEEECCBTCC---------------------------GGGGGGGHHHHTTCCEEECTTCCCCHHHHHHHHTTC
T ss_pred HhcCCCcccccCCcccc---------------------------hhhHHHHHHhhCCCCEEEccCCCCCHHHHHHHHhcC
Confidence 56777777772 22211 012444555789999999999998865444 46789
Q ss_pred CCCcEEEecCcccCCC-ccccccCCCCCceEec---------CCCcccccCCcccc-CCCcCceEecCCCccccc-cccc
Q 002021 400 QKLQDLGLKDNKLEGS-IPYDICNLAELYRLDL---------DGNKLSGSIPACFS-NLTSLRIVSLGSNELTSI-PLTF 467 (979)
Q Consensus 400 ~~L~~L~L~~N~l~~~-~p~~~~~l~~L~~L~L---------s~N~l~~~~~~~~~-~l~~L~~L~L~~N~l~~l-p~~~ 467 (979)
++|+.|++++| +... ++.....+++|++|++ +.|.+++.....+. .+++|+.|.++.|+++.. +..+
T Consensus 314 ~~L~~L~l~~~-~~~~~l~~l~~~~~~L~~L~L~~~~~~g~~~~~~l~~~~l~~l~~~~~~L~~L~~~~~~l~~~~~~~l 392 (594)
T 2p1m_B 314 PKLQRLWVLDY-IEDAGLEVLASTCKDLRELRVFPSEPFVMEPNVALTEQGLVSVSMGCPKLESVLYFCRQMTNAALITI 392 (594)
T ss_dssp TTCCEEEEEGG-GHHHHHHHHHHHCTTCCEEEEECSCTTCSSCSSCCCHHHHHHHHHHCTTCCEEEEEESCCCHHHHHHH
T ss_pred CCcCEEeCcCc-cCHHHHHHHHHhCCCCCEEEEecCcccccccCCCCCHHHHHHHHHhchhHHHHHHhcCCcCHHHHHHH
Confidence 99999999998 4422 2333345899999999 34566544333343 489999999999999843 3334
Q ss_pred c-CcCCCcEEEec--c----ccccCCC-----ccccccccccceEeccCCccCcccchhhcC-CcccceeecCCccccCC
Q 002021 468 W-NLKDILNLNFS--S----NFLTGSL-----PLEIGSLKVLVGIDLSRNNFSGVIPTEIGG-LKNLEYLFLGYNRLQGS 534 (979)
Q Consensus 468 ~-~l~~L~~L~ls--~----N~l~~~~-----p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~-l~~L~~L~Ls~N~l~~~ 534 (979)
. .+++|+.|+++ + |.++... +..+..+++|+.|+|++ .+++..+..+.. +++|+.|+|++|.+++.
T Consensus 393 ~~~~~~L~~L~L~~~~~~~~~~l~~~~~~~~~~~l~~~~~~L~~L~L~~-~l~~~~~~~l~~~~~~L~~L~L~~~~i~~~ 471 (594)
T 2p1m_B 393 ARNRPNMTRFRLCIIEPKAPDYLTLEPLDIGFGAIVEHCKDLRRLSLSG-LLTDKVFEYIGTYAKKMEMLSVAFAGDSDL 471 (594)
T ss_dssp HHHCTTCCEEEEEESSTTCCCTTTCCCTHHHHHHHHHHCTTCCEEECCS-SCCHHHHHHHHHHCTTCCEEEEESCCSSHH
T ss_pred HhhCCCcceeEeecccCCCcccccCCchhhHHHHHHhhCCCccEEeecC-cccHHHHHHHHHhchhccEeeccCCCCcHH
Confidence 3 58999999999 4 5666321 22366788999999988 787777777766 89999999999999866
Q ss_pred CCCcc-cccccccccccccccccccCCc-cccCccccCeEeccCCcccc
Q 002021 535 IPNSF-GDLISLKFLNLSNNNLSGVIPA-SLEKLSYLEDLNLSFNQLEG 581 (979)
Q Consensus 535 ~p~~~-~~l~~L~~L~Ls~N~l~~~~p~-~~~~l~~L~~L~L~~N~l~~ 581 (979)
.+..+ ..+++|++|+|++|.+++.... ....+++|+.|++++|+++.
T Consensus 472 ~~~~l~~~~~~L~~L~L~~n~~~~~~~~~~~~~l~~L~~L~l~~~~~~~ 520 (594)
T 2p1m_B 472 GMHHVLSGCDSLRKLEIRDCPFGDKALLANASKLETMRSLWMSSCSVSF 520 (594)
T ss_dssp HHHHHHHHCTTCCEEEEESCSCCHHHHHHTGGGGGGSSEEEEESSCCBH
T ss_pred HHHHHHhcCCCcCEEECcCCCCcHHHHHHHHHhCCCCCEEeeeCCCCCH
Confidence 55555 6789999999999999755444 44568999999999999853
No 326
>2z62_A TOLL-like receptor 4, variable lymphocyte recepto; TLR, VLR hybrid, MD-2, LPS, glycoprotein response, inflammatory response, innate immunity; HET: NAG FUL BMA; 1.70A {Homo sapiens} PDB: 2z65_A* 3ul8_A* 3ula_A* 3ul7_A*
Probab=99.92 E-value=4.2e-25 Score=238.28 Aligned_cols=223 Identities=21% Similarity=0.205 Sum_probs=193.0
Q ss_pred EEccCCCCcccCCccccccccccccEEEccCccccCCCCccccCCCcccEEEecCCCCCchhHHhhhcCCCCcEEEecCc
Q 002021 331 FDLSYNPLYRILPRTTVGNLSHSLEEFKMSNCNISGGIPEEISNLTNLRTIYLGGNKLNGSILITLSKLQKLQDLGLKDN 410 (979)
Q Consensus 331 L~Ls~N~l~~~~~~~~~~~l~~~L~~L~L~~n~i~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N 410 (979)
++.++..+..++. .++++|++|++++|++++..+..|..+++|++|++++|++++..+..|.++++|++|++++|
T Consensus 12 ~~c~~~~l~~ip~-----~l~~~l~~L~ls~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n 86 (276)
T 2z62_A 12 YQCMELNFYKIPD-----NLPFSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGN 86 (276)
T ss_dssp EECTTSCCSSCCS-----SSCTTCCEEECTTCCCCEECTTTTTTCTTCSEEECTTCCCCEECTTTTTTCTTCCEEECTTC
T ss_pred EEecCCCccccCC-----CCCCCccEEECCCCcccccCHhHhccccCCcEEECCCCcCCccCHHHccCCcCCCEEECCCC
Confidence 4444555544432 23457888888888888877778999999999999999999888889999999999999999
Q ss_pred ccCCCccccccCCCCCceEecCCCcccccCCccccCCCcCceEecCCCcccc--ccccccCcCCCcEEEeccccccCCCc
Q 002021 411 KLEGSIPYDICNLAELYRLDLDGNKLSGSIPACFSNLTSLRIVSLGSNELTS--IPLTFWNLKDILNLNFSSNFLTGSLP 488 (979)
Q Consensus 411 ~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~--lp~~~~~l~~L~~L~ls~N~l~~~~p 488 (979)
.+++..+..|.++++|++|++++|++.+..+..+..+++|++|++++|+++. +|..+..+++|+.|++++|++++..+
T Consensus 87 ~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~l~~~~~~l~~L~~L~Ls~N~l~~~~~ 166 (276)
T 2z62_A 87 PIQSLALGAFSGLSSLQKLVAVETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYC 166 (276)
T ss_dssp CCCEECTTTTTTCTTCCEEECTTSCCCCSTTCCCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECCSSCCCEECG
T ss_pred ccCccChhhhcCCccccEEECCCCCccccCchhcccCCCCCEEECcCCccceecCchhhccCCCCCEEECCCCCCCcCCH
Confidence 9998888889999999999999999998877789999999999999999986 68889999999999999999998888
Q ss_pred cccccccccc----eEeccCCccCcccchhhcCCcccceeecCCccccCCCCCcccccccccccccccccccccC
Q 002021 489 LEIGSLKVLV----GIDLSRNNFSGVIPTEIGGLKNLEYLFLGYNRLQGSIPNSFGDLISLKFLNLSNNNLSGVI 559 (979)
Q Consensus 489 ~~~~~l~~L~----~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~ 559 (979)
..+..+.+|+ .|++++|++++..+..+.. .+|++|+|++|++++..+..|..+++|+.|+|++|++++..
T Consensus 167 ~~~~~l~~L~~l~l~L~ls~n~l~~~~~~~~~~-~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~N~~~c~c 240 (276)
T 2z62_A 167 TDLRVLHQMPLLNLSLDLSLNPMNFIQPGAFKE-IRLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSC 240 (276)
T ss_dssp GGGHHHHTCTTCCEEEECCSSCCCEECTTSSCS-CCEEEEECCSSCCSCCCTTTTTTCCSCCEEECCSSCBCCCT
T ss_pred HHhhhhhhccccceeeecCCCcccccCccccCC-CcccEEECCCCceeecCHhHhcccccccEEEccCCcccccC
Confidence 8888888887 8999999999776666654 48999999999999777777899999999999999999654
No 327
>1p9a_G Platelet glycoprotein IB alpha chain precursor; platelet receptors, glycocalicin, leucine rich repeats, BLOO clotting; HET: NAG BMA; 1.70A {Homo sapiens} SCOP: c.10.2.7 PDB: 1ook_G* 1qyy_A* 3pmh_G* 1m0z_A 1m10_B 1sq0_B 1gwb_A* 1p8v_A* 1u0n_D 3p72_A
Probab=99.92 E-value=8.6e-25 Score=236.91 Aligned_cols=206 Identities=23% Similarity=0.160 Sum_probs=152.4
Q ss_pred ccCCCcccEEEecCCCCCchhHHhhhcCCCCcEEEecCcccCCCccccccCCCCCceEecCCCcccccCCccccCCCcCc
Q 002021 372 ISNLTNLRTIYLGGNKLNGSILITLSKLQKLQDLGLKDNKLEGSIPYDICNLAELYRLDLDGNKLSGSIPACFSNLTSLR 451 (979)
Q Consensus 372 l~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~ 451 (979)
++++++++++++++|.++..++. + .++++.|++++|.+++..+..|.++++|+.|+|++|.|++..+. +.+++|+
T Consensus 6 ~~~l~~l~~l~~~~~~l~~ip~~-~--~~~l~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~--~~l~~L~ 80 (290)
T 1p9a_G 6 VSKVASHLEVNCDKRNLTALPPD-L--PKDTTILHLSENLLYTFSLATLMPYTRLTQLNLDRAELTKLQVD--GTLPVLG 80 (290)
T ss_dssp EECSTTCCEEECTTSCCSSCCSC-C--CTTCCEEECTTSCCSEEEGGGGTTCTTCCEEECTTSCCCEEECC--SCCTTCC
T ss_pred ccccCCccEEECCCCCCCcCCCC-C--CCCCCEEEcCCCcCCccCHHHhhcCCCCCEEECCCCccCcccCC--CCCCcCC
Confidence 44455556666666555533221 2 14566666666666655566666777777777777777654332 6677788
Q ss_pred eEecCCCccccccccccCcCCCcEEEeccccccCCCccccccccccceEeccCCccCcccchhhcCCcccceeecCCccc
Q 002021 452 IVSLGSNELTSIPLTFWNLKDILNLNFSSNFLTGSLPLEIGSLKVLVGIDLSRNNFSGVIPTEIGGLKNLEYLFLGYNRL 531 (979)
Q Consensus 452 ~L~L~~N~l~~lp~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l 531 (979)
+|++++|+++.+|..+..+++|+.|++++|++++..|..|..+++|+.|+|++|+|++..+..|..+++|+.|+|++|+|
T Consensus 81 ~L~Ls~N~l~~l~~~~~~l~~L~~L~l~~N~l~~l~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l 160 (290)
T 1p9a_G 81 TLDLSHNQLQSLPLLGQTLPALTVLDVSFNRLTSLPLGALRGLGELQELYLKGNELKTLPPGLLTPTPKLEKLSLANNNL 160 (290)
T ss_dssp EEECCSSCCSSCCCCTTTCTTCCEEECCSSCCCCCCSSTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCC
T ss_pred EEECCCCcCCcCchhhccCCCCCEEECCCCcCcccCHHHHcCCCCCCEEECCCCCCCccChhhcccccCCCEEECCCCcC
Confidence 88888888888887777788888888888888877777788888888888888888877777888888888888888888
Q ss_pred cCCCCCcccccccccccccccccccccCCccccCccccCeEeccCCcccccC
Q 002021 532 QGSIPNSFGDLISLKFLNLSNNNLSGVIPASLEKLSYLEDLNLSFNQLEGKI 583 (979)
Q Consensus 532 ~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~ 583 (979)
++..+..|..+++|+.|+|++|+|+ .+|..+..+++|+.|+|++|++.|..
T Consensus 161 ~~l~~~~~~~l~~L~~L~L~~N~l~-~ip~~~~~~~~L~~l~L~~Np~~C~c 211 (290)
T 1p9a_G 161 TELPAGLLNGLENLDTLLLQENSLY-TIPKGFFGSHLLPFAFLHGNPWLCNC 211 (290)
T ss_dssp SCCCTTTTTTCTTCCEEECCSSCCC-CCCTTTTTTCCCSEEECCSCCBCCSG
T ss_pred CccCHHHhcCcCCCCEEECCCCcCC-ccChhhcccccCCeEEeCCCCccCcC
Confidence 8666667788888888888888888 66777777888888888888887754
No 328
>2o6q_A Variable lymphocyte receptor A; leucine-rich repeat protein, LRR, immune system; 2.50A {Eptatretus burgeri}
Probab=99.91 E-value=3.6e-24 Score=229.99 Aligned_cols=184 Identities=27% Similarity=0.325 Sum_probs=133.3
Q ss_pred CCcEEEecCcccCCCccccccCCCCCceEecCCCcccccCCccccCCCcCceEecCCCccccccc-cccCcCCCcEEEec
Q 002021 401 KLQDLGLKDNKLEGSIPYDICNLAELYRLDLDGNKLSGSIPACFSNLTSLRIVSLGSNELTSIPL-TFWNLKDILNLNFS 479 (979)
Q Consensus 401 ~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~lp~-~~~~l~~L~~L~ls 479 (979)
+++.|++++|++++..+..|.++++|++|++++|+++...+..|.++++|++|++++|+++.+|. .+..+++|+.|+++
T Consensus 38 ~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~i~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~ 117 (270)
T 2o6q_A 38 DTKKLDLQSNKLSSLPSKAFHRLTKLRLLYLNDNKLQTLPAGIFKELKNLETLWVTDNKLQALPIGVFDQLVNLAELRLD 117 (270)
T ss_dssp TCSEEECCSSCCSCCCTTSSSSCTTCCEEECCSSCCSCCCTTTTSSCTTCCEEECCSSCCCCCCTTTTTTCSSCCEEECC
T ss_pred CCCEEECcCCCCCeeCHHHhcCCCCCCEEECCCCccCeeChhhhcCCCCCCEEECCCCcCCcCCHhHcccccCCCEEECC
Confidence 34444445555544444455566666666666666665555555666666666666666666654 34566677777777
Q ss_pred cccccCCCccccccccccceEeccCCccCcccchhhcCCcccceeecCCccccCCCCCcccccccccccccccccccccC
Q 002021 480 SNFLTGSLPLEIGSLKVLVGIDLSRNNFSGVIPTEIGGLKNLEYLFLGYNRLQGSIPNSFGDLISLKFLNLSNNNLSGVI 559 (979)
Q Consensus 480 ~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~ 559 (979)
+|++++..+..|+.+++|+.|+|++|++++..+..|..+++|+.|+|++|++++..+..|..+++|++|+|++|++++..
T Consensus 118 ~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~ 197 (270)
T 2o6q_A 118 RNQLKSLPPRVFDSLTKLTYLSLGYNELQSLPKGVFDKLTSLKELRLYNNQLKRVPEGAFDKLTELKTLKLDNNQLKRVP 197 (270)
T ss_dssp SSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCCSCCC
T ss_pred CCccCeeCHHHhCcCcCCCEEECCCCcCCccCHhHccCCcccceeEecCCcCcEeChhHhccCCCcCEEECCCCcCCcCC
Confidence 77777666677778888888888888888777777888888888888888888777777888888888888888888777
Q ss_pred CccccCccccCeEeccCCcccccCC
Q 002021 560 PASLEKLSYLEDLNLSFNQLEGKIP 584 (979)
Q Consensus 560 p~~~~~l~~L~~L~L~~N~l~~~~p 584 (979)
+..|..+++|+.|+|++|++.|..+
T Consensus 198 ~~~~~~l~~L~~L~l~~N~~~c~c~ 222 (270)
T 2o6q_A 198 EGAFDSLEKLKMLQLQENPWDCTCN 222 (270)
T ss_dssp TTTTTTCTTCCEEECCSSCBCCSSS
T ss_pred HHHhccccCCCEEEecCCCeeCCCc
Confidence 7778888889999999998887765
No 329
>3rfs_A Internalin B, repeat modules, variable lymphocyte B; LRR, protein binding, plasma; 1.70A {Listeria monocytogenes} PDB: 3rfj_A
Probab=99.91 E-value=1.6e-24 Score=232.88 Aligned_cols=185 Identities=29% Similarity=0.347 Sum_probs=96.8
Q ss_pred ccCCCcccEEEecCCCCCchhHHhhhcCCCCcEEEecCcccCCCccccccCCCCCceEecCCCcccccCCccccCCCcCc
Q 002021 372 ISNLTNLRTIYLGGNKLNGSILITLSKLQKLQDLGLKDNKLEGSIPYDICNLAELYRLDLDGNKLSGSIPACFSNLTSLR 451 (979)
Q Consensus 372 l~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~ 451 (979)
+..+++|++|++++|.+++. ..+..+++|++|++++|.+++..+..+..+++|++|++++|++++..+..|..+++|+
T Consensus 59 l~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~ 136 (272)
T 3rfs_A 59 IQYLPNVRYLALGGNKLHDI--SALKELTNLTYLILTGNQLQSLPNGVFDKLTNLKELVLVENQLQSLPDGVFDKLTNLT 136 (272)
T ss_dssp GGGCTTCCEEECTTSCCCCC--GGGTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCC
T ss_pred cccCCCCcEEECCCCCCCCc--hhhcCCCCCCEEECCCCccCccChhHhcCCcCCCEEECCCCcCCccCHHHhccCCCCC
Confidence 45556666666666666542 2455555555555555555555555555566666666666666555555555555566
Q ss_pred eEecCCCcccccccc-ccCcCCCcEEEeccccccCCCccccccccccceEeccCCccCcccchhhcCCcccceeecCCcc
Q 002021 452 IVSLGSNELTSIPLT-FWNLKDILNLNFSSNFLTGSLPLEIGSLKVLVGIDLSRNNFSGVIPTEIGGLKNLEYLFLGYNR 530 (979)
Q Consensus 452 ~L~L~~N~l~~lp~~-~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~ 530 (979)
+|++++|+++.+|.. +..+++|+.|++++|++++..+..++.+++|+.|+|++|++++..|..|..+++|++|+|++|.
T Consensus 137 ~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~ 216 (272)
T 3rfs_A 137 YLNLAHNQLQSLPKGVFDKLTNLTELDLSYNQLQSLPEGVFDKLTQLKDLRLYQNQLKSVPDGVFDRLTSLQYIWLHDNP 216 (272)
T ss_dssp EEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSC
T ss_pred EEECCCCccCccCHHHhccCccCCEEECCCCCcCccCHHHhcCCccCCEEECCCCcCCccCHHHHhCCcCCCEEEccCCC
Confidence 665555555554432 3444455555555555544444444445555555555555554444444555555555555554
Q ss_pred ccCCCCCcccccccccccccccccccccCCccccC
Q 002021 531 LQGSIPNSFGDLISLKFLNLSNNNLSGVIPASLEK 565 (979)
Q Consensus 531 l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~ 565 (979)
+.+. +++|+.|+++.|+++|.+|..++.
T Consensus 217 ~~~~-------~~~l~~l~~~~n~~~g~ip~~~~~ 244 (272)
T 3rfs_A 217 WDCT-------CPGIRYLSEWINKHSGVVRNSAGS 244 (272)
T ss_dssp BCCC-------TTTTHHHHHHHHHTGGGBBCTTSC
T ss_pred cccc-------CcHHHHHHHHHHhCCCcccCcccc
Confidence 4432 223444445555555444444433
No 330
>1p9a_G Platelet glycoprotein IB alpha chain precursor; platelet receptors, glycocalicin, leucine rich repeats, BLOO clotting; HET: NAG BMA; 1.70A {Homo sapiens} SCOP: c.10.2.7 PDB: 1ook_G* 1qyy_A* 3pmh_G* 1m0z_A 1m10_B 1sq0_B 1gwb_A* 1p8v_A* 1u0n_D 3p72_A
Probab=99.91 E-value=4.3e-24 Score=231.42 Aligned_cols=208 Identities=27% Similarity=0.271 Sum_probs=186.6
Q ss_pred hhhcCCCCcEEEecCcccCCCccccccCCCCCceEecCCCcccccCCccccCCCcCceEecCCCccccccccccCcCCCc
Q 002021 395 TLSKLQKLQDLGLKDNKLEGSIPYDICNLAELYRLDLDGNKLSGSIPACFSNLTSLRIVSLGSNELTSIPLTFWNLKDIL 474 (979)
Q Consensus 395 ~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~lp~~~~~l~~L~ 474 (979)
.+.++++++++++++|.++ .+|..+. ++++.|+|++|++++..+..|.++++|++|+|++|+|+.++.. ..+++|+
T Consensus 5 ~~~~l~~l~~l~~~~~~l~-~ip~~~~--~~l~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~-~~l~~L~ 80 (290)
T 1p9a_G 5 EVSKVASHLEVNCDKRNLT-ALPPDLP--KDTTILHLSENLLYTFSLATLMPYTRLTQLNLDRAELTKLQVD-GTLPVLG 80 (290)
T ss_dssp EEECSTTCCEEECTTSCCS-SCCSCCC--TTCCEEECTTSCCSEEEGGGGTTCTTCCEEECTTSCCCEEECC-SCCTTCC
T ss_pred cccccCCccEEECCCCCCC-cCCCCCC--CCCCEEEcCCCcCCccCHHHhhcCCCCCEEECCCCccCcccCC-CCCCcCC
Confidence 4678899999999999998 4665553 6899999999999998899999999999999999999998875 7899999
Q ss_pred EEEeccccccCCCccccccccccceEeccCCccCcccchhhcCCcccceeecCCccccCCCCCccccccccccccccccc
Q 002021 475 NLNFSSNFLTGSLPLEIGSLKVLVGIDLSRNNFSGVIPTEIGGLKNLEYLFLGYNRLQGSIPNSFGDLISLKFLNLSNNN 554 (979)
Q Consensus 475 ~L~ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~ 554 (979)
.|++++|+++ .+|..+..+++|+.|+|++|+|++..|..|.++++|++|+|++|+|++..+..|..+++|+.|+|++|+
T Consensus 81 ~L~Ls~N~l~-~l~~~~~~l~~L~~L~l~~N~l~~l~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~ 159 (290)
T 1p9a_G 81 TLDLSHNQLQ-SLPLLGQTLPALTVLDVSFNRLTSLPLGALRGLGELQELYLKGNELKTLPPGLLTPTPKLEKLSLANNN 159 (290)
T ss_dssp EEECCSSCCS-SCCCCTTTCTTCCEEECCSSCCCCCCSSTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSC
T ss_pred EEECCCCcCC-cCchhhccCCCCCEEECCCCcCcccCHHHHcCCCCCCEEECCCCCCCccChhhcccccCCCEEECCCCc
Confidence 9999999999 678899999999999999999998888999999999999999999998888889999999999999999
Q ss_pred ccccCCccccCccccCeEeccCCcccccCCCCCCCCCcccccccCCccccCCC
Q 002021 555 LSGVIPASLEKLSYLEDLNLSFNQLEGKIPRGGSFGNFSAQSFEGNELLCGSP 607 (979)
Q Consensus 555 l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~~~~~~~~~~N~~~c~~p 607 (979)
|++..+..|..+++|+.|+|++|+++...+.......+..+.+.+||+.|.+.
T Consensus 160 l~~l~~~~~~~l~~L~~L~L~~N~l~~ip~~~~~~~~L~~l~L~~Np~~C~c~ 212 (290)
T 1p9a_G 160 LTELPAGLLNGLENLDTLLLQENSLYTIPKGFFGSHLLPFAFLHGNPWLCNCE 212 (290)
T ss_dssp CSCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCCCSEEECCSCCBCCSGG
T ss_pred CCccCHHHhcCcCCCCEEECCCCcCCccChhhcccccCCeEEeCCCCccCcCc
Confidence 99877778899999999999999999543334445667888999999999643
No 331
>3rfs_A Internalin B, repeat modules, variable lymphocyte B; LRR, protein binding, plasma; 1.70A {Listeria monocytogenes} PDB: 3rfj_A
Probab=99.91 E-value=1.7e-24 Score=232.83 Aligned_cols=219 Identities=23% Similarity=0.271 Sum_probs=192.7
Q ss_pred ccEEEccCccccCCCCccccCCCcccEEEecCCCCCchhHHhhhcCCCCcEEEecCcccCCCccccccCCCCCceEecCC
Q 002021 354 LEEFKMSNCNISGGIPEEISNLTNLRTIYLGGNKLNGSILITLSKLQKLQDLGLKDNKLEGSIPYDICNLAELYRLDLDG 433 (979)
Q Consensus 354 L~~L~L~~n~i~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~ 433 (979)
+..+++..+.+... ..+..+++|+.|++++|.++.. ..+..+++|++|++++|.+.+. ..+..+++|++|++++
T Consensus 21 l~~l~l~~~~~~~~--~~~~~l~~L~~L~l~~~~i~~~--~~l~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~L~~ 94 (272)
T 3rfs_A 21 TIKANLKKKSVTDA--VTQNELNSIDQIIANNSDIKSV--QGIQYLPNVRYLALGGNKLHDI--SALKELTNLTYLILTG 94 (272)
T ss_dssp HHHHHHTCSCTTSE--ECHHHHTTCCEEECTTSCCCCC--TTGGGCTTCCEEECTTSCCCCC--GGGTTCTTCCEEECTT
T ss_pred HHHHHhcCcccccc--cccccccceeeeeeCCCCcccc--cccccCCCCcEEECCCCCCCCc--hhhcCCCCCCEEECCC
Confidence 44455555555433 3466788999999999998854 3588999999999999999863 4789999999999999
Q ss_pred CcccccCCccccCCCcCceEecCCCcccccccc-ccCcCCCcEEEeccccccCCCccccccccccceEeccCCccCcccc
Q 002021 434 NKLSGSIPACFSNLTSLRIVSLGSNELTSIPLT-FWNLKDILNLNFSSNFLTGSLPLEIGSLKVLVGIDLSRNNFSGVIP 512 (979)
Q Consensus 434 N~l~~~~~~~~~~l~~L~~L~L~~N~l~~lp~~-~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p 512 (979)
|++++..+..|.++++|++|++++|+++.+|.. +..+++|+.|++++|++++..+..++.+++|+.|++++|++++..+
T Consensus 95 n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~ 174 (272)
T 3rfs_A 95 NQLQSLPNGVFDKLTNLKELVLVENQLQSLPDGVFDKLTNLTYLNLAHNQLQSLPKGVFDKLTNLTELDLSYNQLQSLPE 174 (272)
T ss_dssp SCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCT
T ss_pred CccCccChhHhcCCcCCCEEECCCCcCCccCHHHhccCCCCCEEECCCCccCccCHHHhccCccCCEEECCCCCcCccCH
Confidence 999988888899999999999999999988765 7889999999999999998888888999999999999999998888
Q ss_pred hhhcCCcccceeecCCccccCCCCCcccccccccccccccccccccCCccccCccccCeEeccCCcccccCCC
Q 002021 513 TEIGGLKNLEYLFLGYNRLQGSIPNSFGDLISLKFLNLSNNNLSGVIPASLEKLSYLEDLNLSFNQLEGKIPR 585 (979)
Q Consensus 513 ~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~ 585 (979)
..|+.+++|++|+|++|++++..|..+..+++|+.|+|++|.+.+. +++|+.|+++.|+++|.+|.
T Consensus 175 ~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~-------~~~l~~l~~~~n~~~g~ip~ 240 (272)
T 3rfs_A 175 GVFDKLTQLKDLRLYQNQLKSVPDGVFDRLTSLQYIWLHDNPWDCT-------CPGIRYLSEWINKHSGVVRN 240 (272)
T ss_dssp TTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCC-------TTTTHHHHHHHHHTGGGBBC
T ss_pred HHhcCCccCCEEECCCCcCCccCHHHHhCCcCCCEEEccCCCcccc-------CcHHHHHHHHHHhCCCcccC
Confidence 8899999999999999999988888899999999999999998855 45789999999999999997
No 332
>3en9_A Glycoprotease, O-sialoglycoprotein endopeptidase/protein kinase; endopeptidase activity, protein kinase activity; HET: TBR; 2.67A {Methanocaldococcus jannaschii} PDB: 3enh_A* 2vwb_A*
Probab=99.91 E-value=3.3e-25 Score=260.36 Aligned_cols=186 Identities=17% Similarity=0.192 Sum_probs=144.5
Q ss_pred CCCceeeeecceEEEEEEcCCCcEEEEEEecccccc--------chhcHHHHHHHHHhcCCCCeeeEEEeeccCCeeEEE
Q 002021 685 SENNLIGRGGFGSVYKASLGDGMEVAVKVFTSQCGR--------AFKSFDVECEIMKSIRHRNLIKVISSCSNEEFKALV 756 (979)
Q Consensus 685 ~~~~~lG~G~~g~Vy~~~~~~~~~vAvK~~~~~~~~--------~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 756 (979)
...+.||+|+||.||+|.. .++.+|+|+....... ..+.+.+|++++++++||||+++..++...+..++|
T Consensus 339 ~~~~~LG~G~fg~Vy~~~~-~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~~~~~~~~~~~~~lV 417 (540)
T 3en9_A 339 IPEHLIGKGAEADIKRDSY-LDFDVIIKERVKKGYRDERLDENIRKSRTAREARYLALVKDFGIPAPYIFDVDLDNKRIM 417 (540)
T ss_dssp ---------CCEEEEEEEC-SSCEEEEEEECCCTTSCHHHHHHHHHHHHHHHHHHHHHGGGGTCCCCCEEEEETTTTEEE
T ss_pred CCCCEEeeCCCEEEEEEEE-CCCeEEEEEEecccccchhhhhHHHHHHHHHHHHHHHhcCCCCcCceEEEEEeCCccEEE
Confidence 3457899999999999965 5788999986432111 134578999999999999999655555566778999
Q ss_pred EEecCCCccceeeccCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCEEeCCCCcEEEEeeccccccCCCC
Q 002021 757 LEYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFSIAKMLTGED 836 (979)
Q Consensus 757 ~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~i~H~Dik~~NIll~~~~~~kl~Dfg~~~~~~~~~ 836 (979)
|||+++++|.+++.. +..++.|+++||+||| +++|+||||||+||++++ .+||+|||+++......
T Consensus 418 mE~~~ggsL~~~l~~---------~~~i~~qi~~aL~~LH---~~gIiHrDiKp~NILl~~--~~kL~DFGla~~~~~~~ 483 (540)
T 3en9_A 418 MSYINGKLAKDVIED---------NLDIAYKIGEIVGKLH---KNDVIHNDLTTSNFIFDK--DLYIIDFGLGKISNLDE 483 (540)
T ss_dssp EECCCSEEHHHHSTT---------CTHHHHHHHHHHHHHH---HTTEECTTCCTTSEEESS--SEEECCCTTCEECCCHH
T ss_pred EECCCCCCHHHHHHH---------HHHHHHHHHHHHHHHH---HCcCccCCCCHHHEEECC--eEEEEECccCEECCCcc
Confidence 999999999999876 5689999999999999 999999999999999999 99999999999874332
Q ss_pred Ccc-----eecccccCCCCCCccccCC--CCCCCchhHHHHHHHHHHHHcCCCCCc
Q 002021 837 QSM-----IQTQTLATIGYMAPEYGRE--GRVSANGDVYSFGIMLMETFTGKKPTD 885 (979)
Q Consensus 837 ~~~-----~~~~~~gt~~y~aPE~~~~--~~~~~~~DvwslG~il~el~tg~~P~~ 885 (979)
... ......||+.|+|||++.. ..|+...|+|+..+-..+-+.++.+|.
T Consensus 484 ~~~~~~~~~~~~~~GT~~y~APEv~~~~~~~Y~~~~d~ws~vl~~l~~v~~r~rY~ 539 (540)
T 3en9_A 484 DKAVDLIVFKKAVLSTHHEKFDEIWERFLEGYKSVYDRWEIILELMKDVERRARYV 539 (540)
T ss_dssp HHHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHCTTHHHHHHHHHHHHTCSCCC
T ss_pred ccccchhhhhhhhcCCCCcCCHHHHHHHHHHHHHHHhHHHHHHHHHHHHHhccccC
Confidence 211 1235679999999999876 567788899999988888887777653
No 333
>2ast_B S-phase kinase-associated protein 2; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} SCOP: a.158.1.1 c.10.1.3 PDB: 2ass_B 1fqv_A* 1fs2_A
Probab=99.90 E-value=1.9e-25 Score=248.51 Aligned_cols=268 Identities=18% Similarity=0.242 Sum_probs=163.1
Q ss_pred CCCccceeEeeCCCCcEEEEEecCCCccccCCCCCcCC--CCCCeeeccCCcccccCCccccccCcccEEeccccccccc
Q 002021 58 PVCNWTGVACEVHSQRVTVLNISSLNLTGTIPSQLGNL--SSLQSLNLSFNRLFGSIPSAIFTTYTLKYVCLRGNQLSGT 135 (979)
Q Consensus 58 ~~c~w~gv~c~~~~~~v~~l~l~~~~l~g~~~~~l~~l--~~L~~L~L~~n~~~~~~p~~~~~l~~L~~L~L~~n~l~~~ 135 (979)
-|..|+++.|+. ..++.+|++++.+. +..+..+ ++++.|++++|.+.+..|. ++.+++|++|+|++|.+++.
T Consensus 35 vc~~W~~~~~~~--~~~~~l~l~~~~~~---~~~~~~~~~~~l~~L~l~~n~l~~~~~~-~~~~~~L~~L~L~~~~l~~~ 108 (336)
T 2ast_B 35 VCKRWYRLASDE--SLWQTLDLTGKNLH---PDVTGRLLSQGVIAFRCPRSFMDQPLAE-HFSPFRVQHMDLSNSVIEVS 108 (336)
T ss_dssp SCHHHHHHHTCS--TTSSEEECTTCBCC---HHHHHHHHHTTCSEEECTTCEECSCCCS-CCCCBCCCEEECTTCEECHH
T ss_pred HHHHHHHHhcCc--hhheeeccccccCC---HHHHHhhhhccceEEEcCCccccccchh-hccCCCCCEEEccCCCcCHH
Confidence 356899998863 34667888887776 3445566 7778888888877766554 45677777777777777655
Q ss_pred -CCccccCCCCCcEEEccCCccCchhhhhhhccCCcccCCCCccceeecccc-cccc-cccccccCCCCCCceecCCC-e
Q 002021 136 -FPSFISNKSSLQHLDLSSNALSGEIRANICREIPREFGNLPELELMSLAAN-NLQG-KIPLKIGNLRNLEKLDIGDN-K 211 (979)
Q Consensus 136 -~p~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~~ip~~l~~l~~L~~L~L~~N-~l~~-~~p~~~~~l~~L~~L~Ls~N-~ 211 (979)
+|..+..+++|++|+|++|.+++. .|..++.+++|++|+|++| .+++ .++..+.++++|++|+|++| +
T Consensus 109 ~~~~~~~~~~~L~~L~L~~~~l~~~--------~~~~l~~~~~L~~L~L~~~~~l~~~~l~~~~~~~~~L~~L~l~~~~~ 180 (336)
T 2ast_B 109 TLHGILSQCSKLQNLSLEGLRLSDP--------IVNTLAKNSNLVRLNLSGCSGFSEFALQTLLSSCSRLDELNLSWCFD 180 (336)
T ss_dssp HHHHHHTTBCCCSEEECTTCBCCHH--------HHHHHTTCTTCSEEECTTCBSCCHHHHHHHHHHCTTCCEEECCCCTT
T ss_pred HHHHHHhhCCCCCEEeCcCcccCHH--------HHHHHhcCCCCCEEECCCCCCCCHHHHHHHHhcCCCCCEEcCCCCCC
Confidence 666667777777777777766543 3445556666666666666 4554 24555556666666666666 5
Q ss_pred eeec-CCccccccCccceeeccCCCCcCCCcccccCCCC-CcCEEEccCC--ccc-cccCcccccCCCCcEEeccccc-c
Q 002021 212 LVGI-APIAIFNVSTLKILGLQDNSLSGCLSSIGYARLP-NLEILSLWGN--NFS-GTIPRFIFNASKLSILDLEGNS-F 285 (979)
Q Consensus 212 l~~~-~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~l~-~L~~L~L~~N--~l~-~~~p~~l~~l~~L~~L~Ls~N~-l 285 (979)
+++. .+..+. .++ +|++|+|++| .++ +.+|..+..+++|++|++++|. +
T Consensus 181 l~~~~~~~~~~-------------------------~l~~~L~~L~l~~~~~~~~~~~l~~~~~~~~~L~~L~l~~~~~l 235 (336)
T 2ast_B 181 FTEKHVQVAVA-------------------------HVSETITQLNLSGYRKNLQKSDLSTLVRRCPNLVHLDLSDSVML 235 (336)
T ss_dssp CCHHHHHHHHH-------------------------HSCTTCCEEECCSCGGGSCHHHHHHHHHHCTTCSEEECTTCTTC
T ss_pred cChHHHHHHHH-------------------------hcccCCCEEEeCCCcccCCHHHHHHHHhhCCCCCEEeCCCCCcC
Confidence 5542 233333 445 5555555555 333 3445555666677777777776 5
Q ss_pred ccccCccccccccccceeccccc-cccccchhhhhhcccCCCCccEEEccCCCCcccCCccccccccccccEEEccCccc
Q 002021 286 SGFIPNTFGNLRNLSWLVLSDNY-LTSSTQELSFLSSLSNCKFLKYFDLSYNPLYRILPRTTVGNLSHSLEEFKMSNCNI 364 (979)
Q Consensus 286 ~~~~~~~~~~l~~L~~L~Ls~N~-l~~~~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~~L~~L~L~~n~i 364 (979)
++..+..+..+++|++|++++|. ++. . .+..+.++++|++|++++| +. ...+..+..++..|++++|++
T Consensus 236 ~~~~~~~l~~l~~L~~L~l~~~~~~~~--~---~~~~l~~~~~L~~L~l~~~-i~----~~~~~~l~~~l~~L~l~~n~l 305 (336)
T 2ast_B 236 KNDCFQEFFQLNYLQHLSLSRCYDIIP--E---TLLELGEIPTLKTLQVFGI-VP----DGTLQLLKEALPHLQINCSHF 305 (336)
T ss_dssp CGGGGGGGGGCTTCCEEECTTCTTCCG--G---GGGGGGGCTTCCEEECTTS-SC----TTCHHHHHHHSTTSEESCCCS
T ss_pred CHHHHHHHhCCCCCCEeeCCCCCCCCH--H---HHHHHhcCCCCCEEeccCc-cC----HHHHHHHHhhCcceEEecccC
Confidence 55556666667777777777764 211 1 1234556777777777776 22 222222333455566666666
Q ss_pred cCCCCccccC
Q 002021 365 SGGIPEEISN 374 (979)
Q Consensus 365 ~~~~p~~l~~ 374 (979)
++..|..++.
T Consensus 306 ~~~~~~~~~~ 315 (336)
T 2ast_B 306 TTIARPTIGN 315 (336)
T ss_dssp CCTTCSSCSS
T ss_pred ccccCCcccc
Confidence 6666655543
No 334
>3m19_A Variable lymphocyte receptor A diversity region; adaptive immunity, antibody, T cell, leucine-rich repeat, immune system; 1.70A {Petromyzon marinus} PDB: 3m18_A
Probab=99.90 E-value=1.1e-23 Score=223.58 Aligned_cols=191 Identities=23% Similarity=0.267 Sum_probs=130.7
Q ss_pred CCCccceeEeeCCCCcEEEEEecCCCccccCCCCCcCCCCCCeeeccCCcccccCCccccccCcccEEecccccccccCC
Q 002021 58 PVCNWTGVACEVHSQRVTVLNISSLNLTGTIPSQLGNLSSLQSLNLSFNRLFGSIPSAIFTTYTLKYVCLRGNQLSGTFP 137 (979)
Q Consensus 58 ~~c~w~gv~c~~~~~~v~~l~l~~~~l~g~~~~~l~~l~~L~~L~L~~n~~~~~~p~~~~~l~~L~~L~L~~n~l~~~~p 137 (979)
+||.|.|++|... ...+++++++++ .+|..+. ++|+.|+|++|++++..|..+..+++|++|+|++|++++..|
T Consensus 3 ~Cp~~~gC~C~~~---~~~l~~~~~~l~-~~p~~~~--~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~ 76 (251)
T 3m19_A 3 TCETVTGCTCNEG---KKEVDCQGKSLD-SVPSGIP--ADTEKLDLQSTGLATLSDATFRGLTKLTWLNLDYNQLQTLSA 76 (251)
T ss_dssp -CHHHHSSEEEGG---GTEEECTTCCCS-SCCSCCC--TTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCT
T ss_pred cCCCCCceEcCCC---CeEEecCCCCcc-ccCCCCC--CCCCEEEccCCCcCccCHhHhcCcccCCEEECCCCcCCccCH
Confidence 5889999999632 346888888888 5666554 578888888888887777778888888888888888887777
Q ss_pred ccccCCCCCcEEEccCCccCchhhhhhhccCCcccCCCCccceeecccccccccccccccCCCCCCceecCCCeeeecCC
Q 002021 138 SFISNKSSLQHLDLSSNALSGEIRANICREIPREFGNLPELELMSLAANNLQGKIPLKIGNLRNLEKLDIGDNKLVGIAP 217 (979)
Q Consensus 138 ~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~~ip~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p 217 (979)
..+.++++|++|+|++|.+++. .|..|+.+++|++|+|++|++++..+..|..+++|++|+|++|+|+++.+
T Consensus 77 ~~~~~l~~L~~L~L~~n~l~~~--------~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~ 148 (251)
T 3m19_A 77 GVFDDLTELGTLGLANNQLASL--------PLGVFDHLTQLDKLYLGGNQLKSLPSGVFDRLTKLKELRLNTNQLQSIPA 148 (251)
T ss_dssp TTTTTCTTCCEEECTTSCCCCC--------CTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCT
T ss_pred hHhccCCcCCEEECCCCccccc--------ChhHhcccCCCCEEEcCCCcCCCcChhHhccCCcccEEECcCCcCCccCH
Confidence 7777777788888777777642 33456667777777777777765555556666666666666666666655
Q ss_pred ccccccCccceeeccCCCCcCCCcccccCCCCCcCEEEccCCccccccCcccccCCCCcEEecccccccc
Q 002021 218 IAIFNVSTLKILGLQDNSLSGCLSSIGYARLPNLEILSLWGNNFSGTIPRFIFNASKLSILDLEGNSFSG 287 (979)
Q Consensus 218 ~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~ 287 (979)
..|.+++ +|++|+|++|++++..+..+..+++|++|+|++|.++.
T Consensus 149 ~~~~~l~-------------------------~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c 193 (251)
T 3m19_A 149 GAFDKLT-------------------------NLQTLSLSTNQLQSVPHGAFDRLGKLQTITLFGNQFDC 193 (251)
T ss_dssp TTTTTCT-------------------------TCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSCCBCT
T ss_pred HHcCcCc-------------------------CCCEEECCCCcCCccCHHHHhCCCCCCEEEeeCCceeC
Confidence 5555444 45555555555554444455556666666666666654
No 335
>3goz_A Leucine-rich repeat-containing protein; LEGL7, NESG, LGR148, structural genomics, PSI-2, protein structure initiative; 2.10A {Legionella pneumophila subsp}
Probab=99.90 E-value=1.7e-24 Score=243.12 Aligned_cols=265 Identities=19% Similarity=0.215 Sum_probs=125.1
Q ss_pred EEccCCccccccCcccccCCCCcEEeccccccccccC----ccccccc-cccceeccccccccccchhhhhhcccCC-CC
Q 002021 254 LSLWGNNFSGTIPRFIFNASKLSILDLEGNSFSGFIP----NTFGNLR-NLSWLVLSDNYLTSSTQELSFLSSLSNC-KF 327 (979)
Q Consensus 254 L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~~----~~~~~l~-~L~~L~Ls~N~l~~~~~~~~~~~~l~~l-~~ 327 (979)
+++++|++++.+|..+...++|++|+|++|.+++..+ +.|.+++ +|++|+|++|.++...... +...+... ++
T Consensus 3 ~~ls~n~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~-l~~~l~~~~~~ 81 (362)
T 3goz_A 3 YKLTLHPGSNPVEEFTSIPHGVTSLDLSLNNLYSISTVELIQAFANTPASVTSLNLSGNSLGFKNSDE-LVQILAAIPAN 81 (362)
T ss_dssp EECCCCTTCCHHHHHHTSCTTCCEEECTTSCGGGSCHHHHHHHHHTCCTTCCEEECCSSCGGGSCHHH-HHHHHHTSCTT
T ss_pred cccccccchHHHHHHHhCCCCceEEEccCCCCChHHHHHHHHHHHhCCCceeEEECcCCCCCHHHHHH-HHHHHhccCCC
Confidence 4455555555555555555556666666666655544 4455555 5666666666555443221 11112222 45
Q ss_pred ccEEEccCCCCcccCCccccc---cccccccEEEccCccccCCCCccc----cC-CCcccEEEecCCCCCchh----HHh
Q 002021 328 LKYFDLSYNPLYRILPRTTVG---NLSHSLEEFKMSNCNISGGIPEEI----SN-LTNLRTIYLGGNKLNGSI----LIT 395 (979)
Q Consensus 328 L~~L~Ls~N~l~~~~~~~~~~---~l~~~L~~L~L~~n~i~~~~p~~l----~~-l~~L~~L~L~~N~l~~~~----~~~ 395 (979)
|++|+|++|++.+..+..+.. ..+++|++|++++|.|++..+..+ .. .++|++|+|++|.+++.. +..
T Consensus 82 L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~ 161 (362)
T 3goz_A 82 VTSLNLSGNFLSYKSSDELVKTLAAIPFTITVLDLGWNDFSSKSSSEFKQAFSNLPASITSLNLRGNDLGIKSSDELIQI 161 (362)
T ss_dssp CCEEECCSSCGGGSCHHHHHHHHHTSCTTCCEEECCSSCGGGSCHHHHHHHHTTSCTTCCEEECTTSCGGGSCHHHHHHH
T ss_pred ccEEECcCCcCChHHHHHHHHHHHhCCCCccEEECcCCcCCcHHHHHHHHHHHhCCCceeEEEccCCcCCHHHHHHHHHH
Confidence 555555555544332221111 111234444444444443333222 22 135555555555555322 222
Q ss_pred hhcCC-CCcEEEecCcccCCCccccccCCCCCceEecCCCcccccCCccccCC-CcCceEecCCCcccc-----cccccc
Q 002021 396 LSKLQ-KLQDLGLKDNKLEGSIPYDICNLAELYRLDLDGNKLSGSIPACFSNL-TSLRIVSLGSNELTS-----IPLTFW 468 (979)
Q Consensus 396 l~~l~-~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l-~~L~~L~L~~N~l~~-----lp~~~~ 468 (979)
+..++ +|++|++++|++++..+..+... +... ++|++|+|++|+|+. ++..+.
T Consensus 162 l~~~~~~L~~L~Ls~n~l~~~~~~~l~~~--------------------l~~~~~~L~~L~Ls~N~i~~~~~~~l~~~l~ 221 (362)
T 3goz_A 162 LAAIPANVNSLNLRGNNLASKNCAELAKF--------------------LASIPASVTSLDLSANLLGLKSYAELAYIFS 221 (362)
T ss_dssp HHTSCTTCCEEECTTSCGGGSCHHHHHHH--------------------HHTSCTTCCEEECTTSCGGGSCHHHHHHHHH
T ss_pred HhcCCccccEeeecCCCCchhhHHHHHHH--------------------HHhCCCCCCEEECCCCCCChhHHHHHHHHHh
Confidence 33333 45555555554444333322211 1122 345555555555443 343443
Q ss_pred C-cCCCcEEEeccccccCCCc----cccccccccceEeccCCccCcc-------cchhhcCCcccceeecCCccccCCCC
Q 002021 469 N-LKDILNLNFSSNFLTGSLP----LEIGSLKVLVGIDLSRNNFSGV-------IPTEIGGLKNLEYLFLGYNRLQGSIP 536 (979)
Q Consensus 469 ~-l~~L~~L~ls~N~l~~~~p----~~~~~l~~L~~L~Ls~N~l~~~-------~p~~~~~l~~L~~L~Ls~N~l~~~~p 536 (979)
. .++|+.|+|++|.+++..+ ..+..+++|+.|+|++|.+.+. ++..+..+++|++||+++|++.+..+
T Consensus 222 ~~~~~L~~L~Ls~N~l~~~~~~~l~~~~~~l~~L~~L~L~~n~l~~i~~~~~~~l~~~~~~l~~L~~LdL~~N~l~~~~~ 301 (362)
T 3goz_A 222 SIPNHVVSLNLCLNCLHGPSLENLKLLKDSLKHLQTVYLDYDIVKNMSKEQCKALGAAFPNIQKIILVDKNGKEIHPSHS 301 (362)
T ss_dssp HSCTTCCEEECCSSCCCCCCHHHHHHTTTTTTTCSEEEEEHHHHTTCCHHHHHHHHTTSTTCCEEEEECTTSCBCCGGGC
T ss_pred cCCCCceEEECcCCCCCcHHHHHHHHHHhcCCCccEEEeccCCccccCHHHHHHHHHHhccCCceEEEecCCCcCCCcch
Confidence 3 2355555555555554333 2234455666666666664332 23456677778888888888775544
Q ss_pred Ccc
Q 002021 537 NSF 539 (979)
Q Consensus 537 ~~~ 539 (979)
..+
T Consensus 302 ~~~ 304 (362)
T 3goz_A 302 IPI 304 (362)
T ss_dssp HHH
T ss_pred HHH
Confidence 333
No 336
>2ca6_A RAN GTPase-activating protein 1; GAP, GTPase activation, hemihedral twinning, leucine-rich repeat protein, LRR, merohedral twinning; 2.2A {Schizosaccharomyces pombe} SCOP: c.10.1.2 PDB: 1k5g_C* 1k5d_C 1yrg_A
Probab=99.90 E-value=3.9e-25 Score=250.94 Aligned_cols=187 Identities=22% Similarity=0.262 Sum_probs=93.7
Q ss_pred cCCCcccEEEecCCCCCc----hhHHhhhcCCCCcEEEecCcccCCCcccccc----CC---------CCCceEecCCCc
Q 002021 373 SNLTNLRTIYLGGNKLNG----SILITLSKLQKLQDLGLKDNKLEGSIPYDIC----NL---------AELYRLDLDGNK 435 (979)
Q Consensus 373 ~~l~~L~~L~L~~N~l~~----~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~----~l---------~~L~~L~Ls~N~ 435 (979)
..+++|++|+|++|.+++ .++..+..+++|++|+|++|.+.+..+..+. .+ ++|++|+|++|+
T Consensus 91 ~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~l~~~~~~~~~~~L~~L~L~~n~ 170 (386)
T 2ca6_A 91 LKCPKLHTVRLSDNAFGPTAQEPLIDFLSKHTPLEHLYLHNNGLGPQAGAKIARALQELAVNKKAKNAPPLRSIICGRNR 170 (386)
T ss_dssp TTCTTCCEEECCSCCCCTTTHHHHHHHHHHCTTCCEEECCSSCCHHHHHHHHHHHHHHHHHHHHHHTCCCCCEEECCSSC
T ss_pred hhCCcccEEECCCCcCCHHHHHHHHHHHHhCCCCCEEECcCCCCCHHHHHHHHHHHHHHhhhhhcccCCCCcEEECCCCC
Confidence 444555555555555544 2444445555555555555554432222222 22 455555555555
Q ss_pred cc-ccCC---ccccCCCcCceEecCCCccc------cccccccCcCCCcEEEecccccc----CCCccccccccccceEe
Q 002021 436 LS-GSIP---ACFSNLTSLRIVSLGSNELT------SIPLTFWNLKDILNLNFSSNFLT----GSLPLEIGSLKVLVGID 501 (979)
Q Consensus 436 l~-~~~~---~~~~~l~~L~~L~L~~N~l~------~lp~~~~~l~~L~~L~ls~N~l~----~~~p~~~~~l~~L~~L~ 501 (979)
++ +..+ ..+..+++|++|+|++|+++ -+|..+..+++|+.|+|++|.++ +.+|..+..+++|+.|+
T Consensus 171 l~~~~~~~l~~~l~~~~~L~~L~L~~n~l~~~g~~~l~~~~l~~~~~L~~L~Ls~n~l~~~g~~~l~~~l~~~~~L~~L~ 250 (386)
T 2ca6_A 171 LENGSMKEWAKTFQSHRLLHTVKMVQNGIRPEGIEHLLLEGLAYCQELKVLDLQDNTFTHLGSSALAIALKSWPNLRELG 250 (386)
T ss_dssp CTGGGHHHHHHHHHHCTTCCEEECCSSCCCHHHHHHHHHTTGGGCTTCCEEECCSSCCHHHHHHHHHHHGGGCTTCCEEE
T ss_pred CCcHHHHHHHHHHHhCCCcCEEECcCCCCCHhHHHHHHHHHhhcCCCccEEECcCCCCCcHHHHHHHHHHccCCCcCEEE
Confidence 54 2222 23444555555555555555 12224445555555555555553 34455555555566666
Q ss_pred ccCCccCcc----cchhhc--CCcccceeecCCccccC----CCCCcc-cccccccccccccccccccC
Q 002021 502 LSRNNFSGV----IPTEIG--GLKNLEYLFLGYNRLQG----SIPNSF-GDLISLKFLNLSNNNLSGVI 559 (979)
Q Consensus 502 Ls~N~l~~~----~p~~~~--~l~~L~~L~Ls~N~l~~----~~p~~~-~~l~~L~~L~Ls~N~l~~~~ 559 (979)
|++|+|++. +|..+. .+++|+.|+|++|++++ .+|..+ .++++|++|+|++|++++..
T Consensus 251 L~~n~i~~~~~~~l~~~l~~~~~~~L~~L~L~~n~i~~~g~~~l~~~l~~~l~~L~~L~l~~N~l~~~~ 319 (386)
T 2ca6_A 251 LNDCLLSARGAAAVVDAFSKLENIGLQTLRLQYNEIELDAVRTLKTVIDEKMPDLLFLELNGNRFSEED 319 (386)
T ss_dssp CTTCCCCHHHHHHHHHHHHTCSSCCCCEEECCSSCCBHHHHHHHHHHHHHHCTTCCEEECTTSBSCTTS
T ss_pred CCCCCCchhhHHHHHHHHhhccCCCeEEEECcCCcCCHHHHHHHHHHHHhcCCCceEEEccCCcCCcch
Confidence 666655544 344442 25666666666666654 245444 44566666666666665444
No 337
>3goz_A Leucine-rich repeat-containing protein; LEGL7, NESG, LGR148, structural genomics, PSI-2, protein structure initiative; 2.10A {Legionella pneumophila subsp}
Probab=99.89 E-value=1.8e-24 Score=242.84 Aligned_cols=232 Identities=18% Similarity=0.194 Sum_probs=154.0
Q ss_pred cccEEEccCccccCCCC----ccccCCC-cccEEEecCCCCCchhHHhhhcC-----CCCcEEEecCcccCCCccccccC
Q 002021 353 SLEEFKMSNCNISGGIP----EEISNLT-NLRTIYLGGNKLNGSILITLSKL-----QKLQDLGLKDNKLEGSIPYDICN 422 (979)
Q Consensus 353 ~L~~L~L~~n~i~~~~p----~~l~~l~-~L~~L~L~~N~l~~~~~~~l~~l-----~~L~~L~L~~N~l~~~~p~~~~~ 422 (979)
+|++|+|++|.|++..+ +.+..++ +|++|+|++|++++..+..+..+ ++|++|++++|.+++..+..+..
T Consensus 23 ~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L~~L~Ls~n~l~~~~~~~l~~ 102 (362)
T 3goz_A 23 GVTSLDLSLNNLYSISTVELIQAFANTPASVTSLNLSGNSLGFKNSDELVQILAAIPANVTSLNLSGNFLSYKSSDELVK 102 (362)
T ss_dssp TCCEEECTTSCGGGSCHHHHHHHHHTCCTTCCEEECCSSCGGGSCHHHHHHHHHTSCTTCCEEECCSSCGGGSCHHHHHH
T ss_pred CceEEEccCCCCChHHHHHHHHHHHhCCCceeEEECcCCCCCHHHHHHHHHHHhccCCCccEEECcCCcCChHHHHHHHH
Confidence 34444444444444444 5556666 67777777777776666555554 77777777777777655554433
Q ss_pred ----C-CCCceEecCCCcccccCCcccc----C-CCcCceEecCCCccc-----cccccccCcC-CCcEEEeccccccCC
Q 002021 423 ----L-AELYRLDLDGNKLSGSIPACFS----N-LTSLRIVSLGSNELT-----SIPLTFWNLK-DILNLNFSSNFLTGS 486 (979)
Q Consensus 423 ----l-~~L~~L~Ls~N~l~~~~~~~~~----~-l~~L~~L~L~~N~l~-----~lp~~~~~l~-~L~~L~ls~N~l~~~ 486 (979)
+ ++|++|+|++|++++..+..+. . .++|++|+|++|+++ .++..+...+ +|++|+|++|++++.
T Consensus 103 ~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L~~L~Ls~n~l~~~ 182 (362)
T 3goz_A 103 TLAAIPFTITVLDLGWNDFSSKSSSEFKQAFSNLPASITSLNLRGNDLGIKSSDELIQILAAIPANVNSLNLRGNNLASK 182 (362)
T ss_dssp HHHTSCTTCCEEECCSSCGGGSCHHHHHHHHTTSCTTCCEEECTTSCGGGSCHHHHHHHHHTSCTTCCEEECTTSCGGGS
T ss_pred HHHhCCCCccEEECcCCcCCcHHHHHHHHHHHhCCCceeEEEccCCcCCHHHHHHHHHHHhcCCccccEeeecCCCCchh
Confidence 3 6777777777777765554433 2 257777788777777 3344455554 788888888888776
Q ss_pred Cccccccc-----cccceEeccCCccCcc----cchhhcCC-cccceeecCCccccCCCC----Cccccccccccccccc
Q 002021 487 LPLEIGSL-----KVLVGIDLSRNNFSGV----IPTEIGGL-KNLEYLFLGYNRLQGSIP----NSFGDLISLKFLNLSN 552 (979)
Q Consensus 487 ~p~~~~~l-----~~L~~L~Ls~N~l~~~----~p~~~~~l-~~L~~L~Ls~N~l~~~~p----~~~~~l~~L~~L~Ls~ 552 (979)
.+..+... .+|+.|||++|+|++. ++..+..+ ++|++|+|++|++++..+ ..+..+++|++|+|++
T Consensus 183 ~~~~l~~~l~~~~~~L~~L~Ls~N~i~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~~~~l~~L~~L~L~~ 262 (362)
T 3goz_A 183 NCAELAKFLASIPASVTSLDLSANLLGLKSYAELAYIFSSIPNHVVSLNLCLNCLHGPSLENLKLLKDSLKHLQTVYLDY 262 (362)
T ss_dssp CHHHHHHHHHTSCTTCCEEECTTSCGGGSCHHHHHHHHHHSCTTCCEEECCSSCCCCCCHHHHHHTTTTTTTCSEEEEEH
T ss_pred hHHHHHHHHHhCCCCCCEEECCCCCCChhHHHHHHHHHhcCCCCceEEECcCCCCCcHHHHHHHHHHhcCCCccEEEecc
Confidence 66544433 5888888888888763 45555553 488888888888886544 3345678888888888
Q ss_pred ccccccC-------CccccCccccCeEeccCCcccccCC
Q 002021 553 NNLSGVI-------PASLEKLSYLEDLNLSFNQLEGKIP 584 (979)
Q Consensus 553 N~l~~~~-------p~~~~~l~~L~~L~L~~N~l~~~~p 584 (979)
|++++.. +..+..+++|+.|++++|++.+..|
T Consensus 263 n~l~~i~~~~~~~l~~~~~~l~~L~~LdL~~N~l~~~~~ 301 (362)
T 3goz_A 263 DIVKNMSKEQCKALGAAFPNIQKIILVDKNGKEIHPSHS 301 (362)
T ss_dssp HHHTTCCHHHHHHHHTTSTTCCEEEEECTTSCBCCGGGC
T ss_pred CCccccCHHHHHHHHHHhccCCceEEEecCCCcCCCcch
Confidence 8855433 3356778888888999988876533
No 338
>2xwt_C Thyrotropin receptor; signaling protein-immune system complex, GPCR, graves' disea autoimmunity, receptor-autoantibody complex; HET: NAG BMA MAN; 1.90A {Homo sapiens} PDB: 3g04_C*
Probab=99.89 E-value=2.2e-23 Score=219.60 Aligned_cols=196 Identities=18% Similarity=0.246 Sum_probs=134.4
Q ss_pred cccEEEecCCCCCchhHHhhhcCCCCcEEEecCcc-cCCCccccccCCCCCceEecCC-CcccccCCccccCCCcCceEe
Q 002021 377 NLRTIYLGGNKLNGSILITLSKLQKLQDLGLKDNK-LEGSIPYDICNLAELYRLDLDG-NKLSGSIPACFSNLTSLRIVS 454 (979)
Q Consensus 377 ~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~-l~~~~p~~~~~l~~L~~L~Ls~-N~l~~~~~~~~~~l~~L~~L~ 454 (979)
+|++|++++|++++..+..|.++++|++|++++|+ +++..+..|.++++|++|++++ |++++..+..|.++++|++|+
T Consensus 32 ~l~~L~l~~n~l~~i~~~~~~~l~~L~~L~l~~n~~l~~i~~~~f~~l~~L~~L~l~~~n~l~~i~~~~f~~l~~L~~L~ 111 (239)
T 2xwt_C 32 STQTLKLIETHLRTIPSHAFSNLPNISRIYVSIDVTLQQLESHSFYNLSKVTHIEIRNTRNLTYIDPDALKELPLLKFLG 111 (239)
T ss_dssp TCCEEEEESCCCSEECTTTTTTCTTCCEEEEECCSSCCEECTTTEESCTTCCEEEEEEETTCCEECTTSEECCTTCCEEE
T ss_pred cccEEEEeCCcceEECHHHccCCCCCcEEeCCCCCCcceeCHhHcCCCcCCcEEECCCCCCeeEcCHHHhCCCCCCCEEe
Confidence 56666666666666665566666666666666665 6555555667777777777776 777766666777777777777
Q ss_pred cCCCccccccccccCcCCCc---EEEeccc-cccCCCccccccccccc-eEeccCCccCcccchhhcCCcccceeecCCc
Q 002021 455 LGSNELTSIPLTFWNLKDIL---NLNFSSN-FLTGSLPLEIGSLKVLV-GIDLSRNNFSGVIPTEIGGLKNLEYLFLGYN 529 (979)
Q Consensus 455 L~~N~l~~lp~~~~~l~~L~---~L~ls~N-~l~~~~p~~~~~l~~L~-~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N 529 (979)
+++|+++.+|. +..+++|+ .|++++| ++++..+..|..+++|+ .|++++|+++...+..|.. ++|+.|+|++|
T Consensus 112 l~~n~l~~lp~-~~~l~~L~~L~~L~l~~N~~l~~i~~~~~~~l~~L~~~L~l~~n~l~~i~~~~~~~-~~L~~L~L~~n 189 (239)
T 2xwt_C 112 IFNTGLKMFPD-LTKVYSTDIFFILEITDNPYMTSIPVNAFQGLCNETLTLKLYNNGFTSVQGYAFNG-TKLDAVYLNKN 189 (239)
T ss_dssp EEEECCCSCCC-CTTCCBCCSEEEEEEESCTTCCEECTTTTTTTBSSEEEEECCSCCCCEECTTTTTT-CEEEEEECTTC
T ss_pred CCCCCCccccc-cccccccccccEEECCCCcchhhcCcccccchhcceeEEEcCCCCCcccCHhhcCC-CCCCEEEcCCC
Confidence 77777777765 66666666 7777777 77766666677777777 7777777777444444444 77888888888
Q ss_pred c-ccCCCCCccccc-ccccccccccccccccCCccccCccccCeEeccCC
Q 002021 530 R-LQGSIPNSFGDL-ISLKFLNLSNNNLSGVIPASLEKLSYLEDLNLSFN 577 (979)
Q Consensus 530 ~-l~~~~p~~~~~l-~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N 577 (979)
+ +++..+..|.++ ++|+.|+|++|++++. |.. .+++|+.|+++++
T Consensus 190 ~~l~~i~~~~~~~l~~~L~~L~l~~N~l~~l-~~~--~~~~L~~L~l~~~ 236 (239)
T 2xwt_C 190 KYLTVIDKDAFGGVYSGPSLLDVSQTSVTAL-PSK--GLEHLKELIARNT 236 (239)
T ss_dssp TTCCEECTTTTTTCSBCCSEEECTTCCCCCC-CCT--TCTTCSEEECTTC
T ss_pred CCcccCCHHHhhccccCCcEEECCCCccccC-Chh--HhccCceeeccCc
Confidence 4 776556677777 7788888888887744 333 5667777777665
No 339
>2xwt_C Thyrotropin receptor; signaling protein-immune system complex, GPCR, graves' disea autoimmunity, receptor-autoantibody complex; HET: NAG BMA MAN; 1.90A {Homo sapiens} PDB: 3g04_C*
Probab=99.89 E-value=3.6e-23 Score=217.89 Aligned_cols=186 Identities=20% Similarity=0.224 Sum_probs=128.3
Q ss_pred cCCCCCcCCCCCCeeeccCCcccccCCccccccCcccEEeccccc-ccccCCccccCCCCCcEEEccC-CccCchhhhhh
Q 002021 87 TIPSQLGNLSSLQSLNLSFNRLFGSIPSAIFTTYTLKYVCLRGNQ-LSGTFPSFISNKSSLQHLDLSS-NALSGEIRANI 164 (979)
Q Consensus 87 ~~~~~l~~l~~L~~L~L~~n~~~~~~p~~~~~l~~L~~L~L~~n~-l~~~~p~~l~~l~~L~~L~Ls~-N~l~~~~~~~~ 164 (979)
.+|. +. ++|++|+|++|++++..|..+..+++|++|+|++|+ +++..+..|+++++|++|+|++ |.+++.
T Consensus 25 ~ip~-~~--~~l~~L~l~~n~l~~i~~~~~~~l~~L~~L~l~~n~~l~~i~~~~f~~l~~L~~L~l~~~n~l~~i----- 96 (239)
T 2xwt_C 25 RIPS-LP--PSTQTLKLIETHLRTIPSHAFSNLPNISRIYVSIDVTLQQLESHSFYNLSKVTHIEIRNTRNLTYI----- 96 (239)
T ss_dssp SCCC-CC--TTCCEEEEESCCCSEECTTTTTTCTTCCEEEEECCSSCCEECTTTEESCTTCCEEEEEEETTCCEE-----
T ss_pred ccCC-CC--CcccEEEEeCCcceEECHHHccCCCCCcEEeCCCCCCcceeCHhHcCCCcCCcEEECCCCCCeeEc-----
Confidence 4565 33 388999999999987767788888899999999986 8877667888888999999988 888743
Q ss_pred hccCCcccCCCCccceeecccccccccccccccCCCCCC---ceecCCC-eeeecCCccccccCccc-eeeccCCCCcCC
Q 002021 165 CREIPREFGNLPELELMSLAANNLQGKIPLKIGNLRNLE---KLDIGDN-KLVGIAPIAIFNVSTLK-ILGLQDNSLSGC 239 (979)
Q Consensus 165 ~~~ip~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~---~L~Ls~N-~l~~~~p~~l~~l~~L~-~L~L~~N~l~~~ 239 (979)
.|..|.++++|++|++++|++++ +|. ++.+++|+ +|++++| +++++.+..|.++++|+ .|++++|+++.+
T Consensus 97 ---~~~~f~~l~~L~~L~l~~n~l~~-lp~-~~~l~~L~~L~~L~l~~N~~l~~i~~~~~~~l~~L~~~L~l~~n~l~~i 171 (239)
T 2xwt_C 97 ---DPDALKELPLLKFLGIFNTGLKM-FPD-LTKVYSTDIFFILEITDNPYMTSIPVNAFQGLCNETLTLKLYNNGFTSV 171 (239)
T ss_dssp ---CTTSEECCTTCCEEEEEEECCCS-CCC-CTTCCBCCSEEEEEEESCTTCCEECTTTTTTTBSSEEEEECCSCCCCEE
T ss_pred ---CHHHhCCCCCCCEEeCCCCCCcc-ccc-cccccccccccEEECCCCcchhhcCcccccchhcceeEEEcCCCCCccc
Confidence 23567888888888888888886 555 77777777 8888888 88877776677676666 666666666533
Q ss_pred CcccccCCCCCcCEEEccCCc-cccccCcccccC-CCCcEEecccccccc
Q 002021 240 LSSIGYARLPNLEILSLWGNN-FSGTIPRFIFNA-SKLSILDLEGNSFSG 287 (979)
Q Consensus 240 ~~~~~~~~l~~L~~L~L~~N~-l~~~~p~~l~~l-~~L~~L~Ls~N~l~~ 287 (979)
+. ..|.. ++|++|+|++|+ +++..+..+..+ ++|++|++++|++++
T Consensus 172 ~~-~~~~~-~~L~~L~L~~n~~l~~i~~~~~~~l~~~L~~L~l~~N~l~~ 219 (239)
T 2xwt_C 172 QG-YAFNG-TKLDAVYLNKNKYLTVIDKDAFGGVYSGPSLLDVSQTSVTA 219 (239)
T ss_dssp CT-TTTTT-CEEEEEECTTCTTCCEECTTTTTTCSBCCSEEECTTCCCCC
T ss_pred CH-hhcCC-CCCCEEEcCCCCCcccCCHHHhhccccCCcEEECCCCcccc
Confidence 22 22333 455555555552 544434444444 455555555555543
No 340
>4glp_A Monocyte differentiation antigen CD14; alpha beta BENT solenoid, LRR, lipopolysaccharide, serum, CD leucine-rich repeat, pattern recognition; 4.00A {Homo sapiens}
Probab=99.89 E-value=7.2e-24 Score=232.63 Aligned_cols=228 Identities=18% Similarity=0.204 Sum_probs=140.6
Q ss_pred CCCeeeccCCcccccC-Cc--cccccCcccEEecccccccccCCccc--cCCCCCcEEEccCCccCchhhhhhhccCC-c
Q 002021 97 SLQSLNLSFNRLFGSI-PS--AIFTTYTLKYVCLRGNQLSGTFPSFI--SNKSSLQHLDLSSNALSGEIRANICREIP-R 170 (979)
Q Consensus 97 ~L~~L~L~~n~~~~~~-p~--~~~~l~~L~~L~L~~n~l~~~~p~~l--~~l~~L~~L~Ls~N~l~~~~~~~~~~~ip-~ 170 (979)
.++.|++.++.++... .. ....+++|++|+|++|++++.+|..+ +.+++|++|+|++|.+++.... ++ .
T Consensus 65 ~l~~l~l~~~~~~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~~~~~~L~~L~Ls~n~i~~~~~~-----~~~~ 139 (310)
T 4glp_A 65 RVRRLTVGAAQVPAQLLVGALRVLAYSRLKELTLEDLKITGTMPPLPLEATGLALSSLRLRNVSWATGRSW-----LAEL 139 (310)
T ss_dssp CCCEEEECSCCCBHHHHHHHHHHHHHSCCCEEEEESCCCBSCCCCCSSSCCCBCCSSCEEESCCCSSTTSS-----HHHH
T ss_pred ceeEEEEeCCcCCHHHHHHHHHhcccCceeEEEeeCCEeccchhhhhhhccCCCCCEEEeecccccchhhh-----hHHH
Confidence 4667777777665321 11 11234568888888888887777777 7788888888888887753110 01 2
Q ss_pred ccCCCCccceeecccccccccccccccCCCCCCceecCCCeeee---cCC-ccccccCccceeeccCCCCcCCCcc--cc
Q 002021 171 EFGNLPELELMSLAANNLQGKIPLKIGNLRNLEKLDIGDNKLVG---IAP-IAIFNVSTLKILGLQDNSLSGCLSS--IG 244 (979)
Q Consensus 171 ~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~---~~p-~~l~~l~~L~~L~L~~N~l~~~~~~--~~ 244 (979)
.+..+++|++|+|++|++++..|..++.+++|++|+|++|++.+ ..+ ..+.++++|++|+|++|+++..... ..
T Consensus 140 ~~~~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~~~l 219 (310)
T 4glp_A 140 QQWLKPGLKVLSIAQAHSPAFSCEQVRAFPALTSLDLSDNPGLGERGLMAALCPHKFPAIQNLALRNTGMETPTGVCAAL 219 (310)
T ss_dssp HTTBCSCCCEEEEECCSSCCCCTTSCCCCTTCCEEECCSCTTCHHHHHHTTSCTTSSCCCCSCBCCSSCCCCHHHHHHHH
T ss_pred HhhhccCCCEEEeeCCCcchhhHHHhccCCCCCEEECCCCCCccchhhhHHHhhhcCCCCCEEECCCCCCCchHHHHHHH
Confidence 34567777777777777777777777777777777777777654 222 2235666777777777777543211 12
Q ss_pred cCCCCCcCEEEccCCccccccCcccccC---CCCcEEeccccccccccCccccccccccceeccccccccccchhhhhhc
Q 002021 245 YARLPNLEILSLWGNNFSGTIPRFIFNA---SKLSILDLEGNSFSGFIPNTFGNLRNLSWLVLSDNYLTSSTQELSFLSS 321 (979)
Q Consensus 245 ~~~l~~L~~L~L~~N~l~~~~p~~l~~l---~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~ 321 (979)
+..+++|++|+|++|++++..|..+..+ ++|++|+|++|+|+ .+|..+. ++|++|+|++|+|++++.
T Consensus 220 ~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~~~~L~~L~Ls~N~l~-~lp~~~~--~~L~~L~Ls~N~l~~~~~------- 289 (310)
T 4glp_A 220 AAAGVQPHSLDLSHNSLRATVNPSAPRCMWSSALNSLNLSFAGLE-QVPKGLP--AKLRVLDLSSNRLNRAPQ------- 289 (310)
T ss_dssp HHHTCCCSSEECTTSCCCCCCCSCCSSCCCCTTCCCEECCSSCCC-SCCSCCC--SCCSCEECCSCCCCSCCC-------
T ss_pred HhcCCCCCEEECCCCCCCccchhhHHhccCcCcCCEEECCCCCCC-chhhhhc--CCCCEEECCCCcCCCCch-------
Confidence 3456666666666666666556555555 46666666666666 3444443 566666666666665432
Q ss_pred ccCCCCccEEEccCCCCc
Q 002021 322 LSNCKFLKYFDLSYNPLY 339 (979)
Q Consensus 322 l~~l~~L~~L~Ls~N~l~ 339 (979)
+..+++|++|++++|+++
T Consensus 290 ~~~l~~L~~L~L~~N~l~ 307 (310)
T 4glp_A 290 PDELPEVDNLTLDGNPFL 307 (310)
T ss_dssp TTSCCCCSCEECSSTTTS
T ss_pred hhhCCCccEEECcCCCCC
Confidence 344556666666666554
No 341
>1h6u_A Internalin H; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.8A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1
Probab=99.89 E-value=8.1e-23 Score=223.68 Aligned_cols=197 Identities=22% Similarity=0.343 Sum_probs=132.4
Q ss_pred CcCCCCCCeeeccCCcccccCCccccccCcccEEecccccccccCCccccCCCCCcEEEccCCccCchhhhhhhccCCcc
Q 002021 92 LGNLSSLQSLNLSFNRLFGSIPSAIFTTYTLKYVCLRGNQLSGTFPSFISNKSSLQHLDLSSNALSGEIRANICREIPRE 171 (979)
Q Consensus 92 l~~l~~L~~L~L~~n~~~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~~ip~~ 171 (979)
...+++|++|++++|+++ .+| .+..+++|++|+|++|++++..+ +..+++|++|+|++|.+++ + +.
T Consensus 37 ~~~l~~L~~L~l~~~~i~-~l~-~~~~l~~L~~L~L~~n~i~~~~~--~~~l~~L~~L~L~~n~l~~---------~-~~ 102 (308)
T 1h6u_A 37 QADLDGITTLSAFGTGVT-TIE-GVQYLNNLIGLELKDNQITDLAP--LKNLTKITELELSGNPLKN---------V-SA 102 (308)
T ss_dssp HHHHHTCCEEECTTSCCC-CCT-TGGGCTTCCEEECCSSCCCCCGG--GTTCCSCCEEECCSCCCSC---------C-GG
T ss_pred HHHcCCcCEEEeeCCCcc-Cch-hhhccCCCCEEEccCCcCCCChh--HccCCCCCEEEccCCcCCC---------c-hh
Confidence 345667777777777776 345 56677777777777777775443 7777777777777777763 2 25
Q ss_pred cCCCCccceeecccccccccccccccCCCCCCceecCCCeeeecCCccccccCccceeeccCCCCcCCCcccccCCCCCc
Q 002021 172 FGNLPELELMSLAANNLQGKIPLKIGNLRNLEKLDIGDNKLVGIAPIAIFNVSTLKILGLQDNSLSGCLSSIGYARLPNL 251 (979)
Q Consensus 172 l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~l~~L 251 (979)
++.+++|++|+|++|++++. + .+..+++|++|+|++|+++++.+ +.++++|+.|++++|++++..+ +..+++|
T Consensus 103 ~~~l~~L~~L~l~~n~l~~~-~-~l~~l~~L~~L~l~~n~l~~~~~--l~~l~~L~~L~l~~n~l~~~~~---l~~l~~L 175 (308)
T 1h6u_A 103 IAGLQSIKTLDLTSTQITDV-T-PLAGLSNLQVLYLDLNQITNISP--LAGLTNLQYLSIGNAQVSDLTP---LANLSKL 175 (308)
T ss_dssp GTTCTTCCEEECTTSCCCCC-G-GGTTCTTCCEEECCSSCCCCCGG--GGGCTTCCEEECCSSCCCCCGG---GTTCTTC
T ss_pred hcCCCCCCEEECCCCCCCCc-h-hhcCCCCCCEEECCCCccCcCcc--ccCCCCccEEEccCCcCCCChh---hcCCCCC
Confidence 67777777777777777653 3 26777777777777777776644 6667777777777777765433 5566777
Q ss_pred CEEEccCCccccccCcccccCCCCcEEeccccccccccCccccccccccceecccccccccc
Q 002021 252 EILSLWGNNFSGTIPRFIFNASKLSILDLEGNSFSGFIPNTFGNLRNLSWLVLSDNYLTSST 313 (979)
Q Consensus 252 ~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~ 313 (979)
++|++++|++++..+ +..+++|++|+|++|++++..+ +..+++|+.|+|++|.++..+
T Consensus 176 ~~L~l~~n~l~~~~~--l~~l~~L~~L~L~~N~l~~~~~--l~~l~~L~~L~l~~N~i~~~~ 233 (308)
T 1h6u_A 176 TTLKADDNKISDISP--LASLPNLIEVHLKNNQISDVSP--LANTSNLFIVTLTNQTITNQP 233 (308)
T ss_dssp CEEECCSSCCCCCGG--GGGCTTCCEEECTTSCCCBCGG--GTTCTTCCEEEEEEEEEECCC
T ss_pred CEEECCCCccCcChh--hcCCCCCCEEEccCCccCcccc--ccCCCCCCEEEccCCeeecCC
Confidence 777777777764433 5666777777777777765542 666667777777777666544
No 342
>2ca6_A RAN GTPase-activating protein 1; GAP, GTPase activation, hemihedral twinning, leucine-rich repeat protein, LRR, merohedral twinning; 2.2A {Schizosaccharomyces pombe} SCOP: c.10.1.2 PDB: 1k5g_C* 1k5d_C 1yrg_A
Probab=99.89 E-value=2e-24 Score=244.99 Aligned_cols=265 Identities=17% Similarity=0.209 Sum_probs=173.0
Q ss_pred ccCcccccCCCCcEEeccccccccccC----ccccccccccceecccccccccc----chh-hhhhcccCCCCccEEEcc
Q 002021 264 TIPRFIFNASKLSILDLEGNSFSGFIP----NTFGNLRNLSWLVLSDNYLTSST----QEL-SFLSSLSNCKFLKYFDLS 334 (979)
Q Consensus 264 ~~p~~l~~l~~L~~L~Ls~N~l~~~~~----~~~~~l~~L~~L~Ls~N~l~~~~----~~~-~~~~~l~~l~~L~~L~Ls 334 (979)
.++..+..+++|++|+|++|.+++..+ ..|..+++|++|+|++|.+..+. ..+ ....++..+++|++|+|+
T Consensus 23 ~l~~~l~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~L~~L~Ls~~~~~~l~~~~~~~~~~l~~~l~~~~~L~~L~Ls 102 (386)
T 2ca6_A 23 SVFAVLLEDDSVKEIVLSGNTIGTEAARWLSENIASKKDLEIAEFSDIFTGRVKDEIPEALRLLLQALLKCPKLHTVRLS 102 (386)
T ss_dssp TTSHHHHHCSCCCEEECTTSEECHHHHHHHHHTTTTCTTCCEEECCSCCTTSCGGGSHHHHHHHHHHHTTCTTCCEEECC
T ss_pred HHHHHHhcCCCccEEECCCCCCCHHHHHHHHHHHHhCCCccEEeCcccccCccccchhHHHHHHHHHHhhCCcccEEECC
Confidence 344555555666666666666654432 22445566666666665443221 111 112234556666666666
Q ss_pred CCCCcccCCccccccccccccEEEccCccccCCCCccccCCCcccEEEecCCCCCchhHHhhhc----C---------CC
Q 002021 335 YNPLYRILPRTTVGNLSHSLEEFKMSNCNISGGIPEEISNLTNLRTIYLGGNKLNGSILITLSK----L---------QK 401 (979)
Q Consensus 335 ~N~l~~~~~~~~~~~l~~~L~~L~L~~n~i~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~l~~----l---------~~ 401 (979)
+|.+...... .+|..+..+++|++|+|++|.++...+..+.. + ++
T Consensus 103 ~n~l~~~~~~----------------------~l~~~l~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~l~~~~~~~~~~~ 160 (386)
T 2ca6_A 103 DNAFGPTAQE----------------------PLIDFLSKHTPLEHLYLHNNGLGPQAGAKIARALQELAVNKKAKNAPP 160 (386)
T ss_dssp SCCCCTTTHH----------------------HHHHHHHHCTTCCEEECCSSCCHHHHHHHHHHHHHHHHHHHHHHTCCC
T ss_pred CCcCCHHHHH----------------------HHHHHHHhCCCCCEEECcCCCCCHHHHHHHHHHHHHHhhhhhcccCCC
Confidence 6665432100 24556667777777888877776554444333 3 78
Q ss_pred CcEEEecCcccC-CCcc---ccccCCCCCceEecCCCcccc-----cCCccccCCCcCceEecCCCcc-----ccccccc
Q 002021 402 LQDLGLKDNKLE-GSIP---YDICNLAELYRLDLDGNKLSG-----SIPACFSNLTSLRIVSLGSNEL-----TSIPLTF 467 (979)
Q Consensus 402 L~~L~L~~N~l~-~~~p---~~~~~l~~L~~L~Ls~N~l~~-----~~~~~~~~l~~L~~L~L~~N~l-----~~lp~~~ 467 (979)
|++|++++|++. +.++ ..+..+++|++|+|++|+++. ..+..+..+++|++|+|++|.+ ..+|..+
T Consensus 161 L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~l~~~g~~~l~~~~l~~~~~L~~L~Ls~n~l~~~g~~~l~~~l 240 (386)
T 2ca6_A 161 LRSIICGRNRLENGSMKEWAKTFQSHRLLHTVKMVQNGIRPEGIEHLLLEGLAYCQELKVLDLQDNTFTHLGSSALAIAL 240 (386)
T ss_dssp CCEEECCSSCCTGGGHHHHHHHHHHCTTCCEEECCSSCCCHHHHHHHHHTTGGGCTTCCEEECCSSCCHHHHHHHHHHHG
T ss_pred CcEEECCCCCCCcHHHHHHHHHHHhCCCcCEEECcCCCCCHhHHHHHHHHHhhcCCCccEEECcCCCCCcHHHHHHHHHH
Confidence 888888888876 3344 356677788888888888862 3444777888888888888888 4577778
Q ss_pred cCcCCCcEEEeccccccCC----Ccccc--ccccccceEeccCCccCc----ccchhh-cCCcccceeecCCccccCCCC
Q 002021 468 WNLKDILNLNFSSNFLTGS----LPLEI--GSLKVLVGIDLSRNNFSG----VIPTEI-GGLKNLEYLFLGYNRLQGSIP 536 (979)
Q Consensus 468 ~~l~~L~~L~ls~N~l~~~----~p~~~--~~l~~L~~L~Ls~N~l~~----~~p~~~-~~l~~L~~L~Ls~N~l~~~~p 536 (979)
..+++|+.|+|++|.+++. +|..+ +.+++|+.|+|++|.+++ .+|..+ .++++|++|+|++|++++..+
T Consensus 241 ~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~~~L~~L~L~~n~i~~~g~~~l~~~l~~~l~~L~~L~l~~N~l~~~~~ 320 (386)
T 2ca6_A 241 KSWPNLRELGLNDCLLSARGAAAVVDAFSKLENIGLQTLRLQYNEIELDAVRTLKTVIDEKMPDLLFLELNGNRFSEEDD 320 (386)
T ss_dssp GGCTTCCEEECTTCCCCHHHHHHHHHHHHTCSSCCCCEEECCSSCCBHHHHHHHHHHHHHHCTTCCEEECTTSBSCTTSH
T ss_pred ccCCCcCEEECCCCCCchhhHHHHHHHHhhccCCCeEEEECcCCcCCHHHHHHHHHHHHhcCCCceEEEccCCcCCcchh
Confidence 8888888888888888765 45666 348899999999999997 478777 668999999999999997653
Q ss_pred --Ccc-ccccccccccc
Q 002021 537 --NSF-GDLISLKFLNL 550 (979)
Q Consensus 537 --~~~-~~l~~L~~L~L 550 (979)
..+ ..+++++.+++
T Consensus 321 ~~~~l~~~l~~~~~~~l 337 (386)
T 2ca6_A 321 VVDEIREVFSTRGRGEL 337 (386)
T ss_dssp HHHHHHHHHHHHTCCEE
T ss_pred HHHHHHHHhhhcCcchh
Confidence 222 22455554444
No 343
>4glp_A Monocyte differentiation antigen CD14; alpha beta BENT solenoid, LRR, lipopolysaccharide, serum, CD leucine-rich repeat, pattern recognition; 4.00A {Homo sapiens}
Probab=99.89 E-value=4.3e-23 Score=226.39 Aligned_cols=202 Identities=18% Similarity=0.216 Sum_probs=130.2
Q ss_pred cccEEEccCccccCCCCccc--cCCCcccEEEecCCCCCchhH----HhhhcCCCCcEEEecCcccCCCccccccCCCCC
Q 002021 353 SLEEFKMSNCNISGGIPEEI--SNLTNLRTIYLGGNKLNGSIL----ITLSKLQKLQDLGLKDNKLEGSIPYDICNLAEL 426 (979)
Q Consensus 353 ~L~~L~L~~n~i~~~~p~~l--~~l~~L~~L~L~~N~l~~~~~----~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L 426 (979)
+|++|++++|.+++..|..+ ..+++|++|+|++|.+++..+ ..+..+++|++|++++|.+.+..+..+..+++|
T Consensus 92 ~L~~L~l~~n~l~~~~~~~~~~~~~~~L~~L~Ls~n~i~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L 171 (310)
T 4glp_A 92 RLKELTLEDLKITGTMPPLPLEATGLALSSLRLRNVSWATGRSWLAELQQWLKPGLKVLSIAQAHSPAFSCEQVRAFPAL 171 (310)
T ss_dssp CCCEEEEESCCCBSCCCCCSSSCCCBCCSSCEEESCCCSSTTSSHHHHHTTBCSCCCEEEEECCSSCCCCTTSCCCCTTC
T ss_pred ceeEEEeeCCEeccchhhhhhhccCCCCCEEEeecccccchhhhhHHHHhhhccCCCEEEeeCCCcchhhHHHhccCCCC
Confidence 46677777777777777777 888899999999998886433 455678888888888888887777788888888
Q ss_pred ceEecCCCccccc---C-CccccCCCcCceEecCCCcccccccc----ccCcCCCcEEEeccccccCCCccccccccccc
Q 002021 427 YRLDLDGNKLSGS---I-PACFSNLTSLRIVSLGSNELTSIPLT----FWNLKDILNLNFSSNFLTGSLPLEIGSLKVLV 498 (979)
Q Consensus 427 ~~L~Ls~N~l~~~---~-~~~~~~l~~L~~L~L~~N~l~~lp~~----~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~ 498 (979)
++|+|++|++.+. . +..+..+++|++|+|++|+++.+|.. +..+++|++|+|++|++++..|..+..+.
T Consensus 172 ~~L~Ls~N~l~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~~~l~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~--- 248 (310)
T 4glp_A 172 TSLDLSDNPGLGERGLMAALCPHKFPAIQNLALRNTGMETPTGVCAALAAAGVQPHSLDLSHNSLRATVNPSAPRCM--- 248 (310)
T ss_dssp CEEECCSCTTCHHHHHHTTSCTTSSCCCCSCBCCSSCCCCHHHHHHHHHHHTCCCSSEECTTSCCCCCCCSCCSSCC---
T ss_pred CEEECCCCCCccchhhhHHHhhhcCCCCCEEECCCCCCCchHHHHHHHHhcCCCCCEEECCCCCCCccchhhHHhcc---
Confidence 8888888887642 1 23346777788888888877765542 23445555555555555544444433331
Q ss_pred eEeccCCccCcccchhhcCCcccceeecCCccccCCCCCcccccccccccccccccccccCCccccCccccCeEeccCCc
Q 002021 499 GIDLSRNNFSGVIPTEIGGLKNLEYLFLGYNRLQGSIPNSFGDLISLKFLNLSNNNLSGVIPASLEKLSYLEDLNLSFNQ 578 (979)
Q Consensus 499 ~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~ 578 (979)
.+++|++|+|++|+|+ .+|..+. ++|++|||++|+|++. |. +..+++|+.|+|++|+
T Consensus 249 ------------------~~~~L~~L~Ls~N~l~-~lp~~~~--~~L~~L~Ls~N~l~~~-~~-~~~l~~L~~L~L~~N~ 305 (310)
T 4glp_A 249 ------------------WSSALNSLNLSFAGLE-QVPKGLP--AKLRVLDLSSNRLNRA-PQ-PDELPEVDNLTLDGNP 305 (310)
T ss_dssp ------------------CCTTCCCEECCSSCCC-SCCSCCC--SCCSCEECCSCCCCSC-CC-TTSCCCCSCEECSSTT
T ss_pred ------------------CcCcCCEEECCCCCCC-chhhhhc--CCCCEEECCCCcCCCC-ch-hhhCCCccEEECcCCC
Confidence 0145566666666665 4454443 5666666666666643 22 4556666666666666
Q ss_pred cc
Q 002021 579 LE 580 (979)
Q Consensus 579 l~ 580 (979)
|+
T Consensus 306 l~ 307 (310)
T 4glp_A 306 FL 307 (310)
T ss_dssp TS
T ss_pred CC
Confidence 65
No 344
>3cvr_A Invasion plasmid antigen; leucine rich repeat and alpha fold, ligase; 2.80A {Shigella flexneri 2A}
Probab=99.88 E-value=3.4e-23 Score=242.87 Aligned_cols=209 Identities=24% Similarity=0.373 Sum_probs=163.0
Q ss_pred cccCCCCCCC-----cccee-EeeCCCCcEEEEEecCCCccccCCCCCcCCCCCCeeeccCCcccccCCccccccCcccE
Q 002021 51 KNWNTSTPVC-----NWTGV-ACEVHSQRVTVLNISSLNLTGTIPSQLGNLSSLQSLNLSFNRLFGSIPSAIFTTYTLKY 124 (979)
Q Consensus 51 ~~w~~~~~~c-----~w~gv-~c~~~~~~v~~l~l~~~~l~g~~~~~l~~l~~L~~L~L~~n~~~~~~p~~~~~l~~L~~ 124 (979)
.+|..+.++| .|.|+ .|.. .+++.|+|++|+|++ +|..+. ++|++|+|++|+|+ .+| ..+++|++
T Consensus 34 ~~W~~~~~~~~~~~~~~~~l~~C~~--~~L~~L~Ls~n~L~~-lp~~l~--~~L~~L~Ls~N~l~-~ip---~~l~~L~~ 104 (571)
T 3cvr_A 34 DKWEKQALPGENRNEAVSLLKECLI--NQFSELQLNRLNLSS-LPDNLP--PQITVLEITQNALI-SLP---ELPASLEY 104 (571)
T ss_dssp HHHHTTCCTTCCHHHHHHHHHHHHH--TTCSEEECCSSCCSC-CCSCCC--TTCSEEECCSSCCS-CCC---CCCTTCCE
T ss_pred HHHhccCCccccccchhhhcccccc--CCccEEEeCCCCCCc-cCHhHc--CCCCEEECcCCCCc-ccc---cccCCCCE
Confidence 3676666677 79999 7864 478999999999997 887763 89999999999998 788 45789999
Q ss_pred EecccccccccCCccccCCCCCcEEEccCCccCchhhhhhhccCCcccCCCCccceeecccccccccccccccCCCCCCc
Q 002021 125 VCLRGNQLSGTFPSFISNKSSLQHLDLSSNALSGEIRANICREIPREFGNLPELELMSLAANNLQGKIPLKIGNLRNLEK 204 (979)
Q Consensus 125 L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~~ip~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~ 204 (979)
|+|++|+|++ +|. +.+ +|++|+|++|.|++ +|. .+++|+.|+|++|+|++ +|. .+++|++
T Consensus 105 L~Ls~N~l~~-ip~-l~~--~L~~L~Ls~N~l~~---------lp~---~l~~L~~L~Ls~N~l~~-lp~---~l~~L~~ 164 (571)
T 3cvr_A 105 LDACDNRLST-LPE-LPA--SLKHLDVDNNQLTM---------LPE---LPALLEYINADNNQLTM-LPE---LPTSLEV 164 (571)
T ss_dssp EECCSSCCSC-CCC-CCT--TCCEEECCSSCCSC---------CCC---CCTTCCEEECCSSCCSC-CCC---CCTTCCE
T ss_pred EEccCCCCCC-cch-hhc--CCCEEECCCCcCCC---------CCC---cCccccEEeCCCCccCc-CCC---cCCCcCE
Confidence 9999999997 676 665 99999999999975 566 67889999999999986 555 5788999
Q ss_pred eecCCCeeeecCCccccccCccceeeccCCCCcCCCcccccCCCCCc-------CEEEccCCccccccCcccccCCCCcE
Q 002021 205 LDIGDNKLVGIAPIAIFNVSTLKILGLQDNSLSGCLSSIGYARLPNL-------EILSLWGNNFSGTIPRFIFNASKLSI 277 (979)
Q Consensus 205 L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~l~~L-------~~L~L~~N~l~~~~p~~l~~l~~L~~ 277 (979)
|+|++|+|+++ |. |. ++|+.|+|++|+|+.++. +.. +| ++|+|++|+|+ .+|..++.+++|++
T Consensus 165 L~Ls~N~L~~l-p~-l~--~~L~~L~Ls~N~L~~lp~---~~~--~L~~~~~~L~~L~Ls~N~l~-~lp~~l~~l~~L~~ 234 (571)
T 3cvr_A 165 LSVRNNQLTFL-PE-LP--ESLEALDVSTNLLESLPA---VPV--RNHHSEETEIFFRCRENRIT-HIPENILSLDPTCT 234 (571)
T ss_dssp EECCSSCCSCC-CC-CC--TTCCEEECCSSCCSSCCC---CC----------CCEEEECCSSCCC-CCCGGGGGSCTTEE
T ss_pred EECCCCCCCCc-ch-hh--CCCCEEECcCCCCCchhh---HHH--hhhcccccceEEecCCCcce-ecCHHHhcCCCCCE
Confidence 99999998885 44 54 788888888888885544 222 55 77788888777 56777777777777
Q ss_pred EeccccccccccCcccccccc
Q 002021 278 LDLEGNSFSGFIPNTFGNLRN 298 (979)
Q Consensus 278 L~Ls~N~l~~~~~~~~~~l~~ 298 (979)
|+|++|.+++.+|..|+.++.
T Consensus 235 L~L~~N~l~~~~p~~l~~l~~ 255 (571)
T 3cvr_A 235 IILEDNPLSSRIRESLSQQTA 255 (571)
T ss_dssp EECCSSSCCHHHHHHHHHHHH
T ss_pred EEeeCCcCCCcCHHHHHHhhc
Confidence 777777777777766665543
No 345
>1h6u_A Internalin H; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.8A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1
Probab=99.88 E-value=1.4e-22 Score=221.69 Aligned_cols=190 Identities=21% Similarity=0.356 Sum_probs=95.8
Q ss_pred ccccEEEccCccccCCCCccccCCCcccEEEecCCCCCchhHHhhhcCCCCcEEEecCcccCCCccccccCCCCCceEec
Q 002021 352 HSLEEFKMSNCNISGGIPEEISNLTNLRTIYLGGNKLNGSILITLSKLQKLQDLGLKDNKLEGSIPYDICNLAELYRLDL 431 (979)
Q Consensus 352 ~~L~~L~L~~n~i~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L 431 (979)
++|++|++++|.++.. + .+..+++|++|+|++|.+++..+ +..+++|++|++++|++++. + .+..+++|++|++
T Consensus 41 ~~L~~L~l~~~~i~~l-~-~~~~l~~L~~L~L~~n~i~~~~~--~~~l~~L~~L~L~~n~l~~~-~-~~~~l~~L~~L~l 114 (308)
T 1h6u_A 41 DGITTLSAFGTGVTTI-E-GVQYLNNLIGLELKDNQITDLAP--LKNLTKITELELSGNPLKNV-S-AIAGLQSIKTLDL 114 (308)
T ss_dssp HTCCEEECTTSCCCCC-T-TGGGCTTCCEEECCSSCCCCCGG--GTTCCSCCEEECCSCCCSCC-G-GGTTCTTCCEEEC
T ss_pred CCcCEEEeeCCCccCc-h-hhhccCCCCEEEccCCcCCCChh--HccCCCCCEEEccCCcCCCc-h-hhcCCCCCCEEEC
Confidence 3566666666666532 2 45556666666666666655444 55555555555555555532 2 4555555555555
Q ss_pred CCCcccccCCccccCCCcCceEecCCCccccccccccCcCCCcEEEeccccccCCCccccccccccceEeccCCccCccc
Q 002021 432 DGNKLSGSIPACFSNLTSLRIVSLGSNELTSIPLTFWNLKDILNLNFSSNFLTGSLPLEIGSLKVLVGIDLSRNNFSGVI 511 (979)
Q Consensus 432 s~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~lp~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~ 511 (979)
++|++++. + .+..+++|++|++++|+++.++. +..+++|+.|++++|++++..+ +..+++|+.|++++|++++..
T Consensus 115 ~~n~l~~~-~-~l~~l~~L~~L~l~~n~l~~~~~-l~~l~~L~~L~l~~n~l~~~~~--l~~l~~L~~L~l~~n~l~~~~ 189 (308)
T 1h6u_A 115 TSTQITDV-T-PLAGLSNLQVLYLDLNQITNISP-LAGLTNLQYLSIGNAQVSDLTP--LANLSKLTTLKADDNKISDIS 189 (308)
T ss_dssp TTSCCCCC-G-GGTTCTTCCEEECCSSCCCCCGG-GGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCCCG
T ss_pred CCCCCCCc-h-hhcCCCCCCEEECCCCccCcCcc-ccCCCCccEEEccCCcCCCChh--hcCCCCCCEEECCCCccCcCh
Confidence 55555532 2 25555555555555555555443 4444555555555555543222 444444555555555444332
Q ss_pred chhhcCCcccceeecCCccccCCCCCccccccccccccccccccc
Q 002021 512 PTEIGGLKNLEYLFLGYNRLQGSIPNSFGDLISLKFLNLSNNNLS 556 (979)
Q Consensus 512 p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~ 556 (979)
+ +..+++|++|+|++|++++..| +..+++|+.|+|++|+++
T Consensus 190 ~--l~~l~~L~~L~L~~N~l~~~~~--l~~l~~L~~L~l~~N~i~ 230 (308)
T 1h6u_A 190 P--LASLPNLIEVHLKNNQISDVSP--LANTSNLFIVTLTNQTIT 230 (308)
T ss_dssp G--GGGCTTCCEEECTTSCCCBCGG--GTTCTTCCEEEEEEEEEE
T ss_pred h--hcCCCCCCEEEccCCccCcccc--ccCCCCCCEEEccCCeee
Confidence 2 4444444444444444443221 444444444444444444
No 346
>3m19_A Variable lymphocyte receptor A diversity region; adaptive immunity, antibody, T cell, leucine-rich repeat, immune system; 1.70A {Petromyzon marinus} PDB: 3m18_A
Probab=99.88 E-value=3.3e-22 Score=212.16 Aligned_cols=181 Identities=26% Similarity=0.323 Sum_probs=137.7
Q ss_pred CcEEEecCcccCCCccccccCCCCCceEecCCCcccccCCccccCCCcCceEecCCCccccccc-cccCcCCCcEEEecc
Q 002021 402 LQDLGLKDNKLEGSIPYDICNLAELYRLDLDGNKLSGSIPACFSNLTSLRIVSLGSNELTSIPL-TFWNLKDILNLNFSS 480 (979)
Q Consensus 402 L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~lp~-~~~~l~~L~~L~ls~ 480 (979)
.++++++++.++ .+|..+. ++++.|+|++|++++..+..|.++++|++|+|++|+++.++. .+..+++|+.|++++
T Consensus 16 ~~~l~~~~~~l~-~~p~~~~--~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~ 92 (251)
T 3m19_A 16 KKEVDCQGKSLD-SVPSGIP--ADTEKLDLQSTGLATLSDATFRGLTKLTWLNLDYNQLQTLSAGVFDDLTELGTLGLAN 92 (251)
T ss_dssp GTEEECTTCCCS-SCCSCCC--TTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTT
T ss_pred CeEEecCCCCcc-ccCCCCC--CCCCEEEccCCCcCccCHhHhcCcccCCEEECCCCcCCccCHhHhccCCcCCEEECCC
Confidence 344555555555 3444433 467777777777776666677777777777777777776554 366777777777777
Q ss_pred ccccCCCccccccccccceEeccCCccCcccchhhcCCcccceeecCCccccCCCCCcccccccccccccccccccccCC
Q 002021 481 NFLTGSLPLEIGSLKVLVGIDLSRNNFSGVIPTEIGGLKNLEYLFLGYNRLQGSIPNSFGDLISLKFLNLSNNNLSGVIP 560 (979)
Q Consensus 481 N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p 560 (979)
|++++..+..|..+++|+.|+|++|+|++..+..|..+++|++|+|++|+|++..+..|..+++|++|+|++|++++..+
T Consensus 93 n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~ 172 (251)
T 3m19_A 93 NQLASLPLGVFDHLTQLDKLYLGGNQLKSLPSGVFDRLTKLKELRLNTNQLQSIPAGAFDKLTNLQTLSLSTNQLQSVPH 172 (251)
T ss_dssp SCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCT
T ss_pred CcccccChhHhcccCCCCEEEcCCCcCCCcChhHhccCCcccEEECcCCcCCccCHHHcCcCcCCCEEECCCCcCCccCH
Confidence 77777667777888888888888888887777778888888888888888887777788888889999999998888777
Q ss_pred ccccCccccCeEeccCCcccccCCC
Q 002021 561 ASLEKLSYLEDLNLSFNQLEGKIPR 585 (979)
Q Consensus 561 ~~~~~l~~L~~L~L~~N~l~~~~p~ 585 (979)
..+..+++|+.|+|++|+|+|..+.
T Consensus 173 ~~~~~l~~L~~L~l~~N~~~c~~~~ 197 (251)
T 3m19_A 173 GAFDRLGKLQTITLFGNQFDCSRCE 197 (251)
T ss_dssp TTTTTCTTCCEEECCSCCBCTTSTT
T ss_pred HHHhCCCCCCEEEeeCCceeCCccc
Confidence 7888888999999999998887543
No 347
>2ast_B S-phase kinase-associated protein 2; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} SCOP: a.158.1.1 c.10.1.3 PDB: 2ass_B 1fqv_A* 1fs2_A
Probab=99.88 E-value=1.5e-23 Score=233.21 Aligned_cols=229 Identities=21% Similarity=0.229 Sum_probs=169.7
Q ss_pred ccccEEEccCccccCCCCccccCCCcccEEEecCCCCCch-hHHhhhcCCCCcEEEecCcccCCCccccccCCCCCceEe
Q 002021 352 HSLEEFKMSNCNISGGIPEEISNLTNLRTIYLGGNKLNGS-ILITLSKLQKLQDLGLKDNKLEGSIPYDICNLAELYRLD 430 (979)
Q Consensus 352 ~~L~~L~L~~n~i~~~~p~~l~~l~~L~~L~L~~N~l~~~-~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ 430 (979)
..++.|++++|.+++..+. +..+++|++|++++|.+++. .+..+..+++|++|++++|.+.+..+..+..+++|++|+
T Consensus 70 ~~l~~L~l~~n~l~~~~~~-~~~~~~L~~L~L~~~~l~~~~~~~~~~~~~~L~~L~L~~~~l~~~~~~~l~~~~~L~~L~ 148 (336)
T 2ast_B 70 QGVIAFRCPRSFMDQPLAE-HFSPFRVQHMDLSNSVIEVSTLHGILSQCSKLQNLSLEGLRLSDPIVNTLAKNSNLVRLN 148 (336)
T ss_dssp TTCSEEECTTCEECSCCCS-CCCCBCCCEEECTTCEECHHHHHHHHTTBCCCSEEECTTCBCCHHHHHHHTTCTTCSEEE
T ss_pred ccceEEEcCCccccccchh-hccCCCCCEEEccCCCcCHHHHHHHHhhCCCCCEEeCcCcccCHHHHHHHhcCCCCCEEE
Confidence 4566777777777665554 45678888888888887765 677778888888888888887777777777888888888
Q ss_pred cCCC-ccccc-CCccccCCCcCceEecCCC-cccc--ccccccCcC-CCcEEEeccc--ccc-CCCccccccccccceEe
Q 002021 431 LDGN-KLSGS-IPACFSNLTSLRIVSLGSN-ELTS--IPLTFWNLK-DILNLNFSSN--FLT-GSLPLEIGSLKVLVGID 501 (979)
Q Consensus 431 Ls~N-~l~~~-~~~~~~~l~~L~~L~L~~N-~l~~--lp~~~~~l~-~L~~L~ls~N--~l~-~~~p~~~~~l~~L~~L~ 501 (979)
+++| .+++. ++..+.++++|++|++++| .++. ++..+..++ +|++|++++| .++ +.+|..+..+++|+.|+
T Consensus 149 L~~~~~l~~~~l~~~~~~~~~L~~L~l~~~~~l~~~~~~~~~~~l~~~L~~L~l~~~~~~~~~~~l~~~~~~~~~L~~L~ 228 (336)
T 2ast_B 149 LSGCSGFSEFALQTLLSSCSRLDELNLSWCFDFTEKHVQVAVAHVSETITQLNLSGYRKNLQKSDLSTLVRRCPNLVHLD 228 (336)
T ss_dssp CTTCBSCCHHHHHHHHHHCTTCCEEECCCCTTCCHHHHHHHHHHSCTTCCEEECCSCGGGSCHHHHHHHHHHCTTCSEEE
T ss_pred CCCCCCCCHHHHHHHHhcCCCCCEEcCCCCCCcChHHHHHHHHhcccCCCEEEeCCCcccCCHHHHHHHHhhCCCCCEEe
Confidence 8888 56652 5566777888888888888 7874 566677788 8888888888 444 44566777788888888
Q ss_pred ccCCc-cCcccchhhcCCcccceeecCCcc-ccCCCCCcccccccccccccccccccccCCccccCc-cccCeEeccCCc
Q 002021 502 LSRNN-FSGVIPTEIGGLKNLEYLFLGYNR-LQGSIPNSFGDLISLKFLNLSNNNLSGVIPASLEKL-SYLEDLNLSFNQ 578 (979)
Q Consensus 502 Ls~N~-l~~~~p~~~~~l~~L~~L~Ls~N~-l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l-~~L~~L~L~~N~ 578 (979)
+++|. +++..+..+..+++|++|++++|. +.......+.++++|+.|++++| ++ ...+..+ ..+..|++++|+
T Consensus 229 l~~~~~l~~~~~~~l~~l~~L~~L~l~~~~~~~~~~~~~l~~~~~L~~L~l~~~-i~---~~~~~~l~~~l~~L~l~~n~ 304 (336)
T 2ast_B 229 LSDSVMLKNDCFQEFFQLNYLQHLSLSRCYDIIPETLLELGEIPTLKTLQVFGI-VP---DGTLQLLKEALPHLQINCSH 304 (336)
T ss_dssp CTTCTTCCGGGGGGGGGCTTCCEEECTTCTTCCGGGGGGGGGCTTCCEEECTTS-SC---TTCHHHHHHHSTTSEESCCC
T ss_pred CCCCCcCCHHHHHHHhCCCCCCEeeCCCCCCCCHHHHHHHhcCCCCCEEeccCc-cC---HHHHHHHHhhCcceEEeccc
Confidence 88888 777777788888888888888885 32222235778888899999888 33 2344555 347788888999
Q ss_pred ccccCCC
Q 002021 579 LEGKIPR 585 (979)
Q Consensus 579 l~~~~p~ 585 (979)
+++..|.
T Consensus 305 l~~~~~~ 311 (336)
T 2ast_B 305 FTTIARP 311 (336)
T ss_dssp SCCTTCS
T ss_pred CccccCC
Confidence 9888775
No 348
>2o6s_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 1.50A {Eptatretus burgeri}
Probab=99.88 E-value=2.1e-22 Score=207.18 Aligned_cols=183 Identities=25% Similarity=0.298 Sum_probs=127.3
Q ss_pred CCccceeEeeCCCCcEEEEEecCCCccccCCCCCcCCCCCCeeeccCCcccccCCccccccCcccEEecccccccccCCc
Q 002021 59 VCNWTGVACEVHSQRVTVLNISSLNLTGTIPSQLGNLSSLQSLNLSFNRLFGSIPSAIFTTYTLKYVCLRGNQLSGTFPS 138 (979)
Q Consensus 59 ~c~w~gv~c~~~~~~v~~l~l~~~~l~g~~~~~l~~l~~L~~L~L~~n~~~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~ 138 (979)
.|.|.+|.|.. ++++ .+|..+ .++|++|+|++|++++..+..+..+++|++|+|++|++++..+.
T Consensus 6 ~C~~~~v~c~~------------~~l~-~~p~~~--~~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~ 70 (208)
T 2o6s_A 6 SCSGTTVECYS------------QGRT-SVPTGI--PAQTTYLDLETNSLKSLPNGVFDELTSLTQLYLGGNKLQSLPNG 70 (208)
T ss_dssp EEETTEEECCS------------SCCS-SCCSCC--CTTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTT
T ss_pred EECCCEEEecC------------CCcc-CCCCCC--CCCCcEEEcCCCccCcCChhhhcccccCcEEECCCCccCccChh
Confidence 38999999963 2344 345443 45889999999998866666677888888888888888876666
Q ss_pred cccCCCCCcEEEccCCccCchhhhhhhccCCcccCCCCccceeecccccccccccccccCCCCCCceecCCCeeeecCCc
Q 002021 139 FISNKSSLQHLDLSSNALSGEIRANICREIPREFGNLPELELMSLAANNLQGKIPLKIGNLRNLEKLDIGDNKLVGIAPI 218 (979)
Q Consensus 139 ~l~~l~~L~~L~Ls~N~l~~~~~~~~~~~ip~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~ 218 (979)
.++.+++|++|+|++|.+++. .+..|+++++|++|+|++|++++..+..+..+++|++|+|++|+++++.+.
T Consensus 71 ~~~~l~~L~~L~Ls~n~l~~~--------~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~ 142 (208)
T 2o6s_A 71 VFNKLTSLTYLNLSTNQLQSL--------PNGVFDKLTQLKELALNTNQLQSLPDGVFDKLTQLKDLRLYQNQLKSVPDG 142 (208)
T ss_dssp TTTTCTTCCEEECCSSCCCCC--------CTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTT
T ss_pred hcCCCCCcCEEECCCCcCCcc--------CHhHhcCccCCCEEEcCCCcCcccCHhHhccCCcCCEEECCCCccceeCHH
Confidence 778888888888888888742 234467778888888888888766666677777788888877777777666
Q ss_pred cccccCccceeeccCCCCcCCCcccccCCCCCcCEEEccCCccccccCcccccC
Q 002021 219 AIFNVSTLKILGLQDNSLSGCLSSIGYARLPNLEILSLWGNNFSGTIPRFIFNA 272 (979)
Q Consensus 219 ~l~~l~~L~~L~L~~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l 272 (979)
.+.++++|+.|++++|.+.+ .+++|++|+++.|+++|.+|..++.+
T Consensus 143 ~~~~l~~L~~L~l~~N~~~~--------~~~~l~~L~~~~n~~~g~ip~~~~~l 188 (208)
T 2o6s_A 143 VFDRLTSLQYIWLHDNPWDC--------TCPGIRYLSEWINKHSGVVRNSAGSV 188 (208)
T ss_dssp TTTTCTTCCEEECCSCCBCC--------CTTTTHHHHHHHHHCTTTBBCTTSSB
T ss_pred HhccCCCccEEEecCCCeec--------CCCCHHHHHHHHHhCCceeeccCccc
Confidence 66666666666666665542 33445555555555555555544443
No 349
>4ay9_X Follicle-stimulating hormone receptor; hormone-receptor complex, leucine-rich repeats, LRR, GPCR; HET: TYS NAG; 2.50A {Homo sapiens} PDB: 1xwd_C*
Probab=99.87 E-value=6.8e-22 Score=220.72 Aligned_cols=243 Identities=21% Similarity=0.206 Sum_probs=165.4
Q ss_pred CccceeEeeCCCCcEEEEEecCCCccccCCCCCcCCCCCCeeeccCCcccccCCccccccCcccEEecccccccccCCc-
Q 002021 60 CNWTGVACEVHSQRVTVLNISSLNLTGTIPSQLGNLSSLQSLNLSFNRLFGSIPSAIFTTYTLKYVCLRGNQLSGTFPS- 138 (979)
Q Consensus 60 c~w~gv~c~~~~~~v~~l~l~~~~l~g~~~~~l~~l~~L~~L~L~~n~~~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~- 138 (979)
|+|..|.|+ +++|+ .+|..+ .+++++|+|++|+|+..-+.+|..+++|++|+|++|++.+.+|.
T Consensus 9 C~~~~v~C~------------~~~Lt-~iP~~l--~~~l~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N~i~~~i~~~ 73 (350)
T 4ay9_X 9 CSNRVFLCQ------------ESKVT-EIPSDL--PRNAIELRFVLTKLRVIQKGAFSGFGDLEKIEISQNDVLEVIEAD 73 (350)
T ss_dssp EETTEEEEE------------STTCC-SCCTTC--CTTCSEEEEESCCCSEECTTSSTTCTTCCEEEEECCTTCCEECTT
T ss_pred eeCCEEEec------------CCCCC-ccCcCc--CCCCCEEEccCCcCCCcCHHHHcCCCCCCEEECcCCCCCCccChh
Confidence 677777775 45666 567665 36788999999998844445678888888888888888766654
Q ss_pred cccCCCCCcE-EEccCCccCchhhhhhhccCCcccCCCCccceeecccccccccccccccCCCCCCceecCC-CeeeecC
Q 002021 139 FISNKSSLQH-LDLSSNALSGEIRANICREIPREFGNLPELELMSLAANNLQGKIPLKIGNLRNLEKLDIGD-NKLVGIA 216 (979)
Q Consensus 139 ~l~~l~~L~~-L~Ls~N~l~~~~~~~~~~~ip~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~-N~l~~~~ 216 (979)
.|.++++|++ ++++.|++++. .|..|+++++|++|++++|++++..+..+....++..|++.+ |++..+.
T Consensus 74 ~f~~L~~l~~~l~~~~N~l~~l--------~~~~f~~l~~L~~L~l~~n~l~~~~~~~~~~~~~l~~l~l~~~~~i~~l~ 145 (350)
T 4ay9_X 74 VFSNLPKLHEIRIEKANNLLYI--------NPEAFQNLPNLQYLLISNTGIKHLPDVHKIHSLQKVLLDIQDNINIHTIE 145 (350)
T ss_dssp SBCSCTTCCEEEEEEETTCCEE--------CTTSBCCCTTCCEEEEEEECCSSCCCCTTCCBSSCEEEEEESCTTCCEEC
T ss_pred HhhcchhhhhhhcccCCccccc--------CchhhhhccccccccccccccccCCchhhcccchhhhhhhcccccccccc
Confidence 5778887765 56667887643 356788888888888888888876666677777778888854 5777777
Q ss_pred CccccccC-ccceeeccCCCCcCCCcccccCCCCCcCEEEccC-CccccccCcccccCCCCcEEeccccccccccCcccc
Q 002021 217 PIAIFNVS-TLKILGLQDNSLSGCLSSIGYARLPNLEILSLWG-NNFSGTIPRFIFNASKLSILDLEGNSFSGFIPNTFG 294 (979)
Q Consensus 217 p~~l~~l~-~L~~L~L~~N~l~~~~~~~~~~~l~~L~~L~L~~-N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~~~~~~ 294 (979)
+..|..+. .++.|+|++|+|+.+.... | ...+|++|++++ |.++...+..|.++++|++|||++|+|+.+.+..|.
T Consensus 146 ~~~f~~~~~~l~~L~L~~N~i~~i~~~~-f-~~~~L~~l~l~~~n~l~~i~~~~f~~l~~L~~LdLs~N~l~~lp~~~~~ 223 (350)
T 4ay9_X 146 RNSFVGLSFESVILWLNKNGIQEIHNSA-F-NGTQLDELNLSDNNNLEELPNDVFHGASGPVILDISRTRIHSLPSYGLE 223 (350)
T ss_dssp TTSSTTSBSSCEEEECCSSCCCEECTTS-S-TTEEEEEEECTTCTTCCCCCTTTTTTEECCSEEECTTSCCCCCCSSSCT
T ss_pred ccchhhcchhhhhhccccccccCCChhh-c-cccchhHHhhccCCcccCCCHHHhccCcccchhhcCCCCcCccChhhhc
Confidence 77776664 5777778777777654432 2 345677777764 455543344566777777777777777766555565
Q ss_pred ccccccceeccccccccccchhhhhhcccCCCCccEEEccCC
Q 002021 295 NLRNLSWLVLSDNYLTSSTQELSFLSSLSNCKFLKYFDLSYN 336 (979)
Q Consensus 295 ~l~~L~~L~Ls~N~l~~~~~~~~~~~~l~~l~~L~~L~Ls~N 336 (979)
++++|+.+++ +.++.+| ++.++++|+.++++++
T Consensus 224 ~L~~L~~l~~--~~l~~lP-------~l~~l~~L~~l~l~~~ 256 (350)
T 4ay9_X 224 NLKKLRARST--YNLKKLP-------TLEKLVALMEASLTYP 256 (350)
T ss_dssp TCCEEECTTC--TTCCCCC-------CTTTCCSCCEEECSCH
T ss_pred cchHhhhccC--CCcCcCC-------CchhCcChhhCcCCCC
Confidence 5555554443 2344433 3556666666666654
No 350
>4ay9_X Follicle-stimulating hormone receptor; hormone-receptor complex, leucine-rich repeats, LRR, GPCR; HET: TYS NAG; 2.50A {Homo sapiens} PDB: 1xwd_C*
Probab=99.87 E-value=6.9e-22 Score=220.64 Aligned_cols=179 Identities=21% Similarity=0.206 Sum_probs=85.7
Q ss_pred ccCCCcccE-EEecCCCCCchhHHhhhcCCCCcEEEecCcccCCCccccccCCCCCceEecCC-CcccccCCccccCCC-
Q 002021 372 ISNLTNLRT-IYLGGNKLNGSILITLSKLQKLQDLGLKDNKLEGSIPYDICNLAELYRLDLDG-NKLSGSIPACFSNLT- 448 (979)
Q Consensus 372 l~~l~~L~~-L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~-N~l~~~~~~~~~~l~- 448 (979)
|.+++++++ +.+++|+++...+..|..+++|++|++++|++....+..+....++..|++.+ |++....+..|..+.
T Consensus 75 f~~L~~l~~~l~~~~N~l~~l~~~~f~~l~~L~~L~l~~n~l~~~~~~~~~~~~~l~~l~l~~~~~i~~l~~~~f~~~~~ 154 (350)
T 4ay9_X 75 FSNLPKLHEIRIEKANNLLYINPEAFQNLPNLQYLLISNTGIKHLPDVHKIHSLQKVLLDIQDNINIHTIERNSFVGLSF 154 (350)
T ss_dssp BCSCTTCCEEEEEEETTCCEECTTSBCCCTTCCEEEEEEECCSSCCCCTTCCBSSCEEEEEESCTTCCEECTTSSTTSBS
T ss_pred hhcchhhhhhhcccCCcccccCchhhhhccccccccccccccccCCchhhcccchhhhhhhccccccccccccchhhcch
Confidence 334444332 33344555544445555555555555555555544444455555566666643 455544445555543
Q ss_pred cCceEecCCCccccccccccCcCCCcEEEeccccccCCCccccccccccceEeccCCccCcccchhhcCCcccceeecCC
Q 002021 449 SLRIVSLGSNELTSIPLTFWNLKDILNLNFSSNFLTGSLPLEIGSLKVLVGIDLSRNNFSGVIPTEIGGLKNLEYLFLGY 528 (979)
Q Consensus 449 ~L~~L~L~~N~l~~lp~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~ 528 (979)
.++.|+|++|+|+++|.......+|+.|++++ +|.++.+.++.|.++++|++|+|++
T Consensus 155 ~l~~L~L~~N~i~~i~~~~f~~~~L~~l~l~~-----------------------~n~l~~i~~~~f~~l~~L~~LdLs~ 211 (350)
T 4ay9_X 155 ESVILWLNKNGIQEIHNSAFNGTQLDELNLSD-----------------------NNNLEELPNDVFHGASGPVILDISR 211 (350)
T ss_dssp SCEEEECCSSCCCEECTTSSTTEEEEEEECTT-----------------------CTTCCCCCTTTTTTEECCSEEECTT
T ss_pred hhhhhccccccccCCChhhccccchhHHhhcc-----------------------CCcccCCCHHHhccCcccchhhcCC
Confidence 45666666666666655444444444444432 1333333333444455555555555
Q ss_pred ccccCCCCCcccccccccccccccccccccCCccccCccccCeEeccCC
Q 002021 529 NRLQGSIPNSFGDLISLKFLNLSNNNLSGVIPASLEKLSYLEDLNLSFN 577 (979)
Q Consensus 529 N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N 577 (979)
|+|+...+..|.++++|+.+++ ++++ .+| .+..+++|+.++++++
T Consensus 212 N~l~~lp~~~~~~L~~L~~l~~--~~l~-~lP-~l~~l~~L~~l~l~~~ 256 (350)
T 4ay9_X 212 TRIHSLPSYGLENLKKLRARST--YNLK-KLP-TLEKLVALMEASLTYP 256 (350)
T ss_dssp SCCCCCCSSSCTTCCEEECTTC--TTCC-CCC-CTTTCCSCCEEECSCH
T ss_pred CCcCccChhhhccchHhhhccC--CCcC-cCC-CchhCcChhhCcCCCC
Confidence 5555333333444444444333 2222 333 2455555555555433
No 351
>1zar_A RIO2 kinase; serine kinase, winged-helix, RIO domain, ADP-Mn complex, rRNA processing, transferase; HET: ADP; 1.75A {Archaeoglobus fulgidus} SCOP: a.4.5.56 d.144.1.9 PDB: 1tqi_A* 1tqp_A* 1tqm_A* 1zao_A*
Probab=99.85 E-value=5.7e-22 Score=213.21 Aligned_cols=150 Identities=17% Similarity=0.123 Sum_probs=119.2
Q ss_pred HHHhhCCCCCCceeeeecceEEEEEEcCCCcEEEEEEeccccc------------------cchhcHHHHHHHHHhcCCC
Q 002021 677 LCRATDGFSENNLIGRGGFGSVYKASLGDGMEVAVKVFTSQCG------------------RAFKSFDVECEIMKSIRHR 738 (979)
Q Consensus 677 ~~~~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~vAvK~~~~~~~------------------~~~~~~~~E~~~l~~l~h~ 738 (979)
+......|+..+.||+|+||.||+|...+|+.||||+++.... .....+.+|++++++++|
T Consensus 85 ~~~~~~~~~~~~~iG~G~~g~Vy~~~~~~g~~valK~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~E~~~l~~l~~- 163 (282)
T 1zar_A 85 LVRSGKVDAIGKLMGEGKESAVFNCYSEKFGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSARNEFRALQKLQG- 163 (282)
T ss_dssp HHHTTSCSEEEEEEEECSSEEEEEEEETTTEEEEEEEECC------CCCC-------CHHHHHHHHHHHHHHHHHHTTT-
T ss_pred HHhCCeEEEecCEeccCCCceEEEEEeCCCCEEEEEEEECCCCchhhhhhhhhhcchhhHHHHHHHHHHHHHHHHhccC-
Confidence 3344456667799999999999999777899999999864321 123457899999999994
Q ss_pred CeeeEEEeeccCCeeEEEEEecCCCccceeeccCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCEEeCCC
Q 002021 739 NLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDN 818 (979)
Q Consensus 739 niv~l~~~~~~~~~~~lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~i~H~Dik~~NIll~~~ 818 (979)
+++.+++.. +..++||||++||+|.+ +.. .+...++.|++.|++||| +++|+||||||+||+++ +
T Consensus 164 --~~v~~~~~~-~~~~lvmE~~~g~~L~~-l~~-------~~~~~i~~qi~~~l~~lH---~~giiHrDlkp~NILl~-~ 228 (282)
T 1zar_A 164 --LAVPKVYAW-EGNAVLMELIDAKELYR-VRV-------ENPDEVLDMILEEVAKFY---HRGIVHGDLSQYNVLVS-E 228 (282)
T ss_dssp --SSSCCEEEE-ETTEEEEECCCCEEGGG-CCC-------SCHHHHHHHHHHHHHHHH---HTTEECSCCSTTSEEEE-T
T ss_pred --CCcCeEEec-cceEEEEEecCCCcHHH-cch-------hhHHHHHHHHHHHHHHHH---HCCCEeCCCCHHHEEEE-C
Confidence 555554433 55699999999999998 422 134579999999999999 99999999999999999 9
Q ss_pred CcEEEEeeccccccCCCCCcceecccccCCCCCCccccC
Q 002021 819 MVAHLSDFSIAKMLTGEDQSMIQTQTLATIGYMAPEYGR 857 (979)
Q Consensus 819 ~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~ 857 (979)
+.+||+|||+++.. ..++|||++.
T Consensus 229 ~~vkl~DFG~a~~~---------------~~~~a~e~l~ 252 (282)
T 1zar_A 229 EGIWIIDFPQSVEV---------------GEEGWREILE 252 (282)
T ss_dssp TEEEECCCTTCEET---------------TSTTHHHHHH
T ss_pred CcEEEEECCCCeEC---------------CCCCHHHHHH
Confidence 99999999998642 3468888764
No 352
>3cvr_A Invasion plasmid antigen; leucine rich repeat and alpha fold, ligase; 2.80A {Shigella flexneri 2A}
Probab=99.84 E-value=4.1e-21 Score=225.31 Aligned_cols=169 Identities=25% Similarity=0.294 Sum_probs=98.2
Q ss_pred CcccEEEecCCCCCchhHHhhhcCCCCcEEEecCcccCCCccccccCCCCCceEecCCCcccccCCccccCCCcCceEec
Q 002021 376 TNLRTIYLGGNKLNGSILITLSKLQKLQDLGLKDNKLEGSIPYDICNLAELYRLDLDGNKLSGSIPACFSNLTSLRIVSL 455 (979)
Q Consensus 376 ~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L 455 (979)
++|++|+|++|+|+.. | ..+++|+.|++++|+|++ +|. +.+ +|+.|+|++|+|++ +|. .+++|++|+|
T Consensus 80 ~~L~~L~Ls~N~l~~i-p---~~l~~L~~L~Ls~N~l~~-ip~-l~~--~L~~L~Ls~N~l~~-lp~---~l~~L~~L~L 147 (571)
T 3cvr_A 80 PQITVLEITQNALISL-P---ELPASLEYLDACDNRLST-LPE-LPA--SLKHLDVDNNQLTM-LPE---LPALLEYINA 147 (571)
T ss_dssp TTCSEEECCSSCCSCC-C---CCCTTCCEEECCSSCCSC-CCC-CCT--TCCEEECCSSCCSC-CCC---CCTTCCEEEC
T ss_pred CCCCEEECcCCCCccc-c---cccCCCCEEEccCCCCCC-cch-hhc--CCCEEECCCCcCCC-CCC---cCccccEEeC
Confidence 3444444444444422 2 234455555555555554 444 333 56666666666664 333 4566666666
Q ss_pred CCCccccccccccCcCCCcEEEeccccccCCCccccccccccceEeccCCccCcccchhhcCCccc-------ceeecCC
Q 002021 456 GSNELTSIPLTFWNLKDILNLNFSSNFLTGSLPLEIGSLKVLVGIDLSRNNFSGVIPTEIGGLKNL-------EYLFLGY 528 (979)
Q Consensus 456 ~~N~l~~lp~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L-------~~L~Ls~ 528 (979)
++|+|+.+|. .+++|+.|++++|+|++ +|. |. ++|+.|+|++|+|+ .+|. |.. +| +.|+|++
T Consensus 148 s~N~l~~lp~---~l~~L~~L~Ls~N~L~~-lp~-l~--~~L~~L~Ls~N~L~-~lp~-~~~--~L~~~~~~L~~L~Ls~ 216 (571)
T 3cvr_A 148 DNNQLTMLPE---LPTSLEVLSVRNNQLTF-LPE-LP--ESLEALDVSTNLLE-SLPA-VPV--RNHHSEETEIFFRCRE 216 (571)
T ss_dssp CSSCCSCCCC---CCTTCCEEECCSSCCSC-CCC-CC--TTCCEEECCSSCCS-SCCC-CC----------CCEEEECCS
T ss_pred CCCccCcCCC---cCCCcCEEECCCCCCCC-cch-hh--CCCCEEECcCCCCC-chhh-HHH--hhhcccccceEEecCC
Confidence 6666666665 35566666666666665 444 44 66666677777666 3444 443 55 7777777
Q ss_pred ccccCCCCCcccccccccccccccccccccCCccccCccc
Q 002021 529 NRLQGSIPNSFGDLISLKFLNLSNNNLSGVIPASLEKLSY 568 (979)
Q Consensus 529 N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~ 568 (979)
|+|+ .+|..+..+++|+.|+|++|+|++.+|..+..+..
T Consensus 217 N~l~-~lp~~l~~l~~L~~L~L~~N~l~~~~p~~l~~l~~ 255 (571)
T 3cvr_A 217 NRIT-HIPENILSLDPTCTIILEDNPLSSRIRESLSQQTA 255 (571)
T ss_dssp SCCC-CCCGGGGGSCTTEEEECCSSSCCHHHHHHHHHHHH
T ss_pred Ccce-ecCHHHhcCCCCCEEEeeCCcCCCcCHHHHHHhhc
Confidence 7777 46666666777777777777777777766665543
No 353
>2v70_A SLIT-2, SLIT homolog 2 protein N-product; neurogenesis, glycoprotein, secreted, chemotaxis, LRR structural protein, differentiation; HET: NAG; 3.01A {Homo sapiens}
Probab=99.83 E-value=5.5e-21 Score=197.96 Aligned_cols=156 Identities=27% Similarity=0.328 Sum_probs=129.7
Q ss_pred ceEecCCCcccccCCccccCCCcCceEecCCCccccccc--cccCcCCCcEEEeccccccCCCccccccccccceEeccC
Q 002021 427 YRLDLDGNKLSGSIPACFSNLTSLRIVSLGSNELTSIPL--TFWNLKDILNLNFSSNFLTGSLPLEIGSLKVLVGIDLSR 504 (979)
Q Consensus 427 ~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~lp~--~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~Ls~ 504 (979)
+.+++++|.++. +|..+. ..+++|+|++|+|+.++. .|..+++|+.|+|++|+|++..+..|..+++|+.|+|++
T Consensus 14 ~~l~~s~n~l~~-iP~~~~--~~~~~L~L~~N~l~~~~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls~ 90 (220)
T 2v70_A 14 TTVDCSNQKLNK-IPEHIP--QYTAELRLNNNEFTVLEATGIFKKLPQLRKINFSNNKITDIEEGAFEGASGVNEILLTS 90 (220)
T ss_dssp TEEECCSSCCSS-CCSCCC--TTCSEEECCSSCCCEECCCCCGGGCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCS
T ss_pred CEeEeCCCCccc-CccCCC--CCCCEEEcCCCcCCccCchhhhccCCCCCEEECCCCcCCEECHHHhCCCCCCCEEECCC
Confidence 467777777763 454443 345778888888877643 367788888888888888877777888899999999999
Q ss_pred CccCcccchhhcCCcccceeecCCccccCCCCCcccccccccccccccccccccCCccccCccccCeEeccCCcccccCC
Q 002021 505 NNFSGVIPTEIGGLKNLEYLFLGYNRLQGSIPNSFGDLISLKFLNLSNNNLSGVIPASLEKLSYLEDLNLSFNQLEGKIP 584 (979)
Q Consensus 505 N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p 584 (979)
|+|++..|..|.++++|++|+|++|+|++..|..|..+++|++|+|++|+|++..|..|..+++|+.|+|++|+|+|..+
T Consensus 91 N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~c~c~ 170 (220)
T 2v70_A 91 NRLENVQHKMFKGLESLKTLMLRSNRITCVGNDSFIGLSSVRLLSLYDNQITTVAPGAFDTLHSLSTLNLLANPFNCNCY 170 (220)
T ss_dssp SCCCCCCGGGGTTCSSCCEEECTTSCCCCBCTTSSTTCTTCSEEECTTSCCCCBCTTTTTTCTTCCEEECCSCCEECSGG
T ss_pred CccCccCHhHhcCCcCCCEEECCCCcCCeECHhHcCCCccCCEEECCCCcCCEECHHHhcCCCCCCEEEecCcCCcCCCc
Confidence 99998888889999999999999999998888999999999999999999998889999999999999999999998776
Q ss_pred C
Q 002021 585 R 585 (979)
Q Consensus 585 ~ 585 (979)
-
T Consensus 171 l 171 (220)
T 2v70_A 171 L 171 (220)
T ss_dssp G
T ss_pred h
Confidence 3
No 354
>3e6j_A Variable lymphocyte receptor diversity region; variable lymphocyte receptors, VLR, leucine-rich repeat, LRR adaptive immunity, immune system; HET: DR2; 1.67A {Petromyzon marinus}
Probab=99.83 E-value=3.4e-20 Score=193.37 Aligned_cols=163 Identities=25% Similarity=0.271 Sum_probs=127.7
Q ss_pred ccCCCCCCCccceeEeeCCCCcEEEEEecCCCccccCCCCCcCCCCCCeeeccCCcccccCCccccccCcccEEeccccc
Q 002021 52 NWNTSTPVCNWTGVACEVHSQRVTVLNISSLNLTGTIPSQLGNLSSLQSLNLSFNRLFGSIPSAIFTTYTLKYVCLRGNQ 131 (979)
Q Consensus 52 ~w~~~~~~c~w~gv~c~~~~~~v~~l~l~~~~l~g~~~~~l~~l~~L~~L~L~~n~~~~~~p~~~~~l~~L~~L~L~~n~ 131 (979)
-|..+...|+|.+|.|+. ++++ .+|..+. ++|++|+|++|++++..|..+..+++|++|+|++|+
T Consensus 11 ~~~~~~~~Cs~~~v~c~~------------~~l~-~ip~~~~--~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~N~ 75 (229)
T 3e6j_A 11 AACPSQCSCSGTTVDCRS------------KRHA-SVPAGIP--TNAQILYLHDNQITKLEPGVFDSLINLKELYLGSNQ 75 (229)
T ss_dssp CCCCTTCEEETTEEECTT------------SCCS-SCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSC
T ss_pred ccCCCCCEEeCCEeEccC------------CCcC-ccCCCCC--CCCCEEEcCCCccCccCHHHhhCccCCcEEECCCCC
Confidence 455677889999999963 3344 5666554 889999999999998888888889999999999999
Q ss_pred ccccCCccccCCCCCcEEEccCCccCchhhhhhhccCCcccCCCCccceeecccccccccccccccCCCCCCceecCCCe
Q 002021 132 LSGTFPSFISNKSSLQHLDLSSNALSGEIRANICREIPREFGNLPELELMSLAANNLQGKIPLKIGNLRNLEKLDIGDNK 211 (979)
Q Consensus 132 l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~~ip~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~ 211 (979)
+++..+..|..+++|++|+|++|+|++. .+..|..+++|++|+|++|+++ .+|..+..+++|++|+|++|+
T Consensus 76 l~~i~~~~~~~l~~L~~L~Ls~N~l~~l--------~~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~L~~N~ 146 (229)
T 3e6j_A 76 LGALPVGVFDSLTQLTVLDLGTNQLTVL--------PSAVFDRLVHLKELFMCCNKLT-ELPRGIERLTHLTHLALDQNQ 146 (229)
T ss_dssp CCCCCTTTTTTCTTCCEEECCSSCCCCC--------CTTTTTTCTTCCEEECCSSCCC-SCCTTGGGCTTCSEEECCSSC
T ss_pred CCCcChhhcccCCCcCEEECCCCcCCcc--------ChhHhCcchhhCeEeccCCccc-ccCcccccCCCCCEEECCCCc
Confidence 9876667788889999999999988743 3445788888888888888888 677778888888888888888
Q ss_pred eeecCCccccccCccceeeccCCCCcC
Q 002021 212 LVGIAPIAIFNVSTLKILGLQDNSLSG 238 (979)
Q Consensus 212 l~~~~p~~l~~l~~L~~L~L~~N~l~~ 238 (979)
|+++.+..|..+++|+.|+|++|.+..
T Consensus 147 l~~~~~~~~~~l~~L~~L~l~~N~~~c 173 (229)
T 3e6j_A 147 LKSIPHGAFDRLSSLTHAYLFGNPWDC 173 (229)
T ss_dssp CCCCCTTTTTTCTTCCEEECTTSCBCT
T ss_pred CCccCHHHHhCCCCCCEEEeeCCCccC
Confidence 887776666666666666666666653
No 355
>2o6s_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 1.50A {Eptatretus burgeri}
Probab=99.83 E-value=4.1e-20 Score=189.96 Aligned_cols=141 Identities=28% Similarity=0.345 Sum_probs=77.7
Q ss_pred cCCCCCceEecCCCcccccCCccccCCCcCceEecCCCcccccccc-ccCcCCCcEEEeccccccCCCccccccccccce
Q 002021 421 CNLAELYRLDLDGNKLSGSIPACFSNLTSLRIVSLGSNELTSIPLT-FWNLKDILNLNFSSNFLTGSLPLEIGSLKVLVG 499 (979)
Q Consensus 421 ~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~lp~~-~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~ 499 (979)
..+++|++|++++|++++..+..|..+++|++|++++|+++.+|.. +..+++|+.|++++|++++..+..|..+++|+.
T Consensus 49 ~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~ 128 (208)
T 2o6s_A 49 DELTSLTQLYLGGNKLQSLPNGVFNKLTSLTYLNLSTNQLQSLPNGVFDKLTQLKELALNTNQLQSLPDGVFDKLTQLKD 128 (208)
T ss_dssp TTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCE
T ss_pred cccccCcEEECCCCccCccChhhcCCCCCcCEEECCCCcCCccCHhHhcCccCCCEEEcCCCcCcccCHhHhccCCcCCE
Confidence 3333444444444444333333344444444444444444444332 344444555555555555444444556666666
Q ss_pred EeccCCccCcccchhhcCCcccceeecCCccccCCCCCcccccccccccccccccccccCCccccCccc
Q 002021 500 IDLSRNNFSGVIPTEIGGLKNLEYLFLGYNRLQGSIPNSFGDLISLKFLNLSNNNLSGVIPASLEKLSY 568 (979)
Q Consensus 500 L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~ 568 (979)
|+|++|++++..+..|..+++|+.|+|++|.+.+ .+++|+.|+++.|+++|.+|..++.++.
T Consensus 129 L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~-------~~~~l~~L~~~~n~~~g~ip~~~~~l~~ 190 (208)
T 2o6s_A 129 LRLYQNQLKSVPDGVFDRLTSLQYIWLHDNPWDC-------TCPGIRYLSEWINKHSGVVRNSAGSVAP 190 (208)
T ss_dssp EECCSSCCSCCCTTTTTTCTTCCEEECCSCCBCC-------CTTTTHHHHHHHHHCTTTBBCTTSSBCT
T ss_pred EECCCCccceeCHHHhccCCCccEEEecCCCeec-------CCCCHHHHHHHHHhCCceeeccCccccC
Confidence 6666666666555566667777777777776653 2346777777777777777777666554
No 356
>4b8c_D Glucose-repressible alcohol dehydrogenase transcr effector; hydrolase-cell cycle complex; 3.41A {Saccharomyces cerevisiae S288C}
Probab=99.82 E-value=9.3e-22 Score=239.67 Aligned_cols=267 Identities=21% Similarity=0.194 Sum_probs=109.2
Q ss_pred CChhHHHHHHHHHHhcccCCCCcccccc-CCCCCCCccceeEeeCCCCcEEEEEecCCCccccCCCCCcCCCCCCeeecc
Q 002021 26 STITDQDALLALKAHITHDPTNFLAKNW-NTSTPVCNWTGVACEVHSQRVTVLNISSLNLTGTIPSQLGNLSSLQSLNLS 104 (979)
Q Consensus 26 ~~~~~~~all~~k~~~~~~~~~~~~~~w-~~~~~~c~w~gv~c~~~~~~v~~l~l~~~~l~g~~~~~l~~l~~L~~L~L~ 104 (979)
....++++|+++........+... ..| ...++++.|.+++++ +.+++.|+|.++++.+ ++. ..|+.++|+
T Consensus 129 ~~~~~~~~l~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~s--~~~~~~l~L~~n~~~~-~~~-----~~l~~l~Ls 199 (727)
T 4b8c_D 129 LVDCTKQALMEMADTLTDSKTAKK-QQPTGDSTPSGTATNSAVS--TPLTPKIELFANGKDE-ANQ-----ALLQHKKLS 199 (727)
T ss_dssp ---CCCHHHHHHHHHHHHHHTTC---------------------------------------------------------
T ss_pred ccccchhhhhhhhhhcccccCccc-CCCcCCCCccccCCCceec--CCccceEEeeCCCCCc-chh-----hHhhcCccC
Confidence 455788999999988755444333 355 344567899999886 4679999999999886 233 335666677
Q ss_pred CCcccccCCccccccCcccEEecccccccccCCccccCCCCCcEEEccCCccCchhhhhhhccCCcccCCCCccceeecc
Q 002021 105 FNRLFGSIPSAIFTTYTLKYVCLRGNQLSGTFPSFISNKSSLQHLDLSSNALSGEIRANICREIPREFGNLPELELMSLA 184 (979)
Q Consensus 105 ~n~~~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~~ip~~l~~l~~L~~L~L~ 184 (979)
.|.+. .++++.|++. ..|..+..+++|+.|+|++|.++ .+|..+.++++|++|+|+
T Consensus 200 ~~~i~--------------~~~~~~n~~~-~~~~~~~~l~~L~~L~Ls~n~l~---------~l~~~~~~l~~L~~L~Ls 255 (727)
T 4b8c_D 200 QYSID--------------EDDDIENRMV-MPKDSKYDDQLWHALDLSNLQIF---------NISANIFKYDFLTRLYLN 255 (727)
T ss_dssp -------------------------------------CCCCCCEEECTTSCCS---------CCCGGGGGCCSCSCCBCT
T ss_pred ccccc--------------Ccccccccee-cChhhhccCCCCcEEECCCCCCC---------CCChhhcCCCCCCEEEee
Confidence 76655 2344455555 45566666666666666666665 256666666667777777
Q ss_pred cccccccccccccCCCCCCceecCCCeeeecCCccccccCccceeeccCCCCcCCCcccccCCCCCcCEEEccCCccccc
Q 002021 185 ANNLQGKIPLKIGNLRNLEKLDIGDNKLVGIAPIAIFNVSTLKILGLQDNSLSGCLSSIGYARLPNLEILSLWGNNFSGT 264 (979)
Q Consensus 185 ~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~ 264 (979)
+|.|+ .+|..|+++++|++|+|++|+|+. +|..|.++++|+.|+|++|.|+.++.. |..+++|++|+|++|.|++.
T Consensus 256 ~N~l~-~lp~~~~~l~~L~~L~Ls~N~l~~-lp~~~~~l~~L~~L~L~~N~l~~lp~~--~~~l~~L~~L~L~~N~l~~~ 331 (727)
T 4b8c_D 256 GNSLT-ELPAEIKNLSNLRVLDLSHNRLTS-LPAELGSCFQLKYFYFFDNMVTTLPWE--FGNLCNLQFLGVEGNPLEKQ 331 (727)
T ss_dssp TSCCS-CCCGGGGGGTTCCEEECTTSCCSS-CCSSGGGGTTCSEEECCSSCCCCCCSS--TTSCTTCCCEECTTSCCCSH
T ss_pred CCcCc-ccChhhhCCCCCCEEeCcCCcCCc-cChhhcCCCCCCEEECCCCCCCccChh--hhcCCCccEEeCCCCccCCC
Confidence 77666 566666677777777777777663 366666777777777777776644332 66777777777777777777
Q ss_pred cCcccccCCC-CcEEeccccccccccCccccccccccceecccc--------ccccccchhhhhhcccCCCCccEEEccC
Q 002021 265 IPRFIFNASK-LSILDLEGNSFSGFIPNTFGNLRNLSWLVLSDN--------YLTSSTQELSFLSSLSNCKFLKYFDLSY 335 (979)
Q Consensus 265 ~p~~l~~l~~-L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N--------~l~~~~~~~~~~~~l~~l~~L~~L~Ls~ 335 (979)
+|..+..+.. +..|+|++|.+++.+|.. |+.|+++.| .+..... ..+.++..+....+++
T Consensus 332 ~p~~~~~~~~~~~~l~l~~N~l~~~~p~~------l~~l~l~~n~~~~~~~~~l~~~~~-----~~~~~l~~~~~~~ls~ 400 (727)
T 4b8c_D 332 FLKILTEKSVTGLIFYLRDNRPEIPLPHE------RRFIEINTDGEPQREYDSLQQSTE-----HLATDLAKRTFTVLSY 400 (727)
T ss_dssp HHHHHHHHHHHHHHHHHHHCCCCCCCCCC---------------------------------------------------
T ss_pred ChHHHhhcchhhhHHhhccCcccCcCccc------cceeEeecccccccccCCcccccc-----chhhcccccceeeeec
Confidence 7776655422 234678888887777653 445556655 1211111 1234566677778888
Q ss_pred CCCcc
Q 002021 336 NPLYR 340 (979)
Q Consensus 336 N~l~~ 340 (979)
|-+.+
T Consensus 401 Nil~~ 405 (727)
T 4b8c_D 401 NTLCQ 405 (727)
T ss_dssp -CCCG
T ss_pred ccccc
Confidence 87754
No 357
>2v9t_B SLIT homolog 2 protein N-product; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens} PDB: 2v9s_A
Probab=99.82 E-value=1.6e-20 Score=194.51 Aligned_cols=155 Identities=23% Similarity=0.358 Sum_probs=120.2
Q ss_pred ceEecCCCcccccCCccccCCCcCceEecCCCccccccc-cccCcCCCcEEEeccccccCCCccccccccccceEeccCC
Q 002021 427 YRLDLDGNKLSGSIPACFSNLTSLRIVSLGSNELTSIPL-TFWNLKDILNLNFSSNFLTGSLPLEIGSLKVLVGIDLSRN 505 (979)
Q Consensus 427 ~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~lp~-~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~Ls~N 505 (979)
+.+++++|.++ .+|..+. ++|++|++++|+|+.+|. .|..+++|+.|+|++|++++..|..|.++++|+.|+|++|
T Consensus 14 ~~v~c~~~~l~-~iP~~l~--~~l~~L~l~~n~i~~i~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~N 90 (220)
T 2v9t_B 14 NIVDCRGKGLT-EIPTNLP--ETITEIRLEQNTIKVIPPGAFSPYKKLRRIDLSNNQISELAPDAFQGLRSLNSLVLYGN 90 (220)
T ss_dssp TEEECTTSCCS-SCCSSCC--TTCCEEECCSSCCCEECTTSSTTCTTCCEEECCSSCCCEECTTTTTTCSSCCEEECCSS
T ss_pred CEEEcCCCCcC-cCCCccC--cCCCEEECCCCcCCCcCHhHhhCCCCCCEEECCCCcCCCcCHHHhhCCcCCCEEECCCC
Confidence 45666666666 3444433 567777777777776665 5667777777777777777777778888888888888888
Q ss_pred ccCcccchhhcCCcccceeecCCccccCCCCCcccccccccccccccccccccCCccccCccccCeEeccCCcccccCC
Q 002021 506 NFSGVIPTEIGGLKNLEYLFLGYNRLQGSIPNSFGDLISLKFLNLSNNNLSGVIPASLEKLSYLEDLNLSFNQLEGKIP 584 (979)
Q Consensus 506 ~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p 584 (979)
+|+...+..|.++++|++|+|++|+|++..|..|..+++|++|+|++|+|++..+..|..+++|+.|+|++|+|.|...
T Consensus 91 ~l~~l~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~~~c~c~ 169 (220)
T 2v9t_B 91 KITELPKSLFEGLFSLQLLLLNANKINCLRVDAFQDLHNLNLLSLYDNKLQTIAKGTFSPLRAIQTMHLAQNPFICDCH 169 (220)
T ss_dssp CCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCEECSGG
T ss_pred cCCccCHhHccCCCCCCEEECCCCCCCEeCHHHcCCCCCCCEEECCCCcCCEECHHHHhCCCCCCEEEeCCCCcCCCCc
Confidence 8887767778888888888888888888778888888888888888888888777788888888888888888887544
No 358
>1h6t_A Internalin B; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.6A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 2wqu_A 2uzy_A 2uzx_A 2wqv_A* 2wqw_A 2wqx_A 1d0b_A 1otn_A 1oto_A 1otm_A
Probab=99.80 E-value=1.1e-19 Score=196.80 Aligned_cols=172 Identities=24% Similarity=0.351 Sum_probs=98.7
Q ss_pred cCCCCCCeeeccCCcccccCCccccccCcccEEecccccccccCCccccCCCCCcEEEccCCccCchhhhhhhccCCccc
Q 002021 93 GNLSSLQSLNLSFNRLFGSIPSAIFTTYTLKYVCLRGNQLSGTFPSFISNKSSLQHLDLSSNALSGEIRANICREIPREF 172 (979)
Q Consensus 93 ~~l~~L~~L~L~~n~~~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~~ip~~l 172 (979)
..+++|++|++++|.+++ +| .+..+++|++|+|++|++++..| ++++++|++|+|++|.+++ +| .+
T Consensus 43 ~~l~~L~~L~l~~~~i~~-~~-~~~~l~~L~~L~L~~n~l~~~~~--l~~l~~L~~L~l~~n~l~~---------~~-~l 108 (291)
T 1h6t_A 43 NELNSIDQIIANNSDIKS-VQ-GIQYLPNVTKLFLNGNKLTDIKP--LANLKNLGWLFLDENKVKD---------LS-SL 108 (291)
T ss_dssp HHHHTCCEEECTTSCCCC-CT-TGGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCC---------GG-GG
T ss_pred hhcCcccEEEccCCCccc-Ch-hHhcCCCCCEEEccCCccCCCcc--cccCCCCCEEECCCCcCCC---------Ch-hh
Confidence 456666677777766653 33 35666666666666666665433 6666666666666666653 22 35
Q ss_pred CCCCccceeecccccccccccccccCCCCCCceecCCCeeeecCCccccccCccceeeccCCCCcCCCcccccCCCCCcC
Q 002021 173 GNLPELELMSLAANNLQGKIPLKIGNLRNLEKLDIGDNKLVGIAPIAIFNVSTLKILGLQDNSLSGCLSSIGYARLPNLE 252 (979)
Q Consensus 173 ~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~l~~L~ 252 (979)
+.+++|++|+|++|++++. ..+..+++|++|++++|+++++ ..+..+++|+.|++++|++++..+ +..+++|+
T Consensus 109 ~~l~~L~~L~L~~n~i~~~--~~l~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~L~~N~l~~~~~---l~~l~~L~ 181 (291)
T 1h6t_A 109 KDLKKLKSLSLEHNGISDI--NGLVHLPQLESLYLGNNKITDI--TVLSRLTKLDTLSLEDNQISDIVP---LAGLTKLQ 181 (291)
T ss_dssp TTCTTCCEEECTTSCCCCC--GGGGGCTTCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCCCGG---GTTCTTCC
T ss_pred ccCCCCCEEECCCCcCCCC--hhhcCCCCCCEEEccCCcCCcc--hhhccCCCCCEEEccCCccccchh---hcCCCccC
Confidence 6666666666666666542 3455666666666666666654 345555555555555555554332 44555555
Q ss_pred EEEccCCccccccCcccccCCCCcEEecccccccc
Q 002021 253 ILSLWGNNFSGTIPRFIFNASKLSILDLEGNSFSG 287 (979)
Q Consensus 253 ~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~ 287 (979)
+|+|++|.+++ +| .+..+++|+.|++++|.++.
T Consensus 182 ~L~L~~N~i~~-l~-~l~~l~~L~~L~l~~n~i~~ 214 (291)
T 1h6t_A 182 NLYLSKNHISD-LR-ALAGLKNLDVLELFSQECLN 214 (291)
T ss_dssp EEECCSSCCCB-CG-GGTTCTTCSEEEEEEEEEEC
T ss_pred EEECCCCcCCC-Ch-hhccCCCCCEEECcCCcccC
Confidence 55555555553 22 24455555555555555543
No 359
>1m9s_A Internalin B; cell invasion, GW domains, SH3 domains, signaling protein; 2.65A {Listeria monocytogenes} SCOP: b.1.18.15 b.34.11.1 b.34.11.1 b.34.11.1 c.10.2.1 PDB: 2y5q_A
Probab=99.80 E-value=2.5e-19 Score=212.60 Aligned_cols=174 Identities=26% Similarity=0.360 Sum_probs=95.5
Q ss_pred CcCCCCCCeeeccCCcccccCCccccccCcccEEecccccccccCCccccCCCCCcEEEccCCccCchhhhhhhccCCcc
Q 002021 92 LGNLSSLQSLNLSFNRLFGSIPSAIFTTYTLKYVCLRGNQLSGTFPSFISNKSSLQHLDLSSNALSGEIRANICREIPRE 171 (979)
Q Consensus 92 l~~l~~L~~L~L~~n~~~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~~ip~~ 171 (979)
+..|++|+.|+|++|.+. .+| .+..+++|++|+|++|++++..| ++.+++|++|+|++|.+++ +| .
T Consensus 39 ~~~L~~L~~L~l~~n~i~-~l~-~l~~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~Ls~N~l~~---------l~-~ 104 (605)
T 1m9s_A 39 QNELNSIDQIIANNSDIK-SVQ-GIQYLPNVTKLFLNGNKLTDIKP--LTNLKNLGWLFLDENKIKD---------LS-S 104 (605)
T ss_dssp HHHHTTCCCCBCTTCCCC-CCT-TGGGCTTCCEEECTTSCCCCCGG--GGGCTTCCEEECCSSCCCC---------CT-T
T ss_pred hhcCCCCCEEECcCCCCC-CCh-HHccCCCCCEEEeeCCCCCCChh--hccCCCCCEEECcCCCCCC---------Ch-h
Confidence 345666666666666665 233 45666666666666666665443 6666666666666666653 22 4
Q ss_pred cCCCCccceeecccccccccccccccCCCCCCceecCCCeeeecCCccccccCccceeeccCCCCcCCCcccccCCCCCc
Q 002021 172 FGNLPELELMSLAANNLQGKIPLKIGNLRNLEKLDIGDNKLVGIAPIAIFNVSTLKILGLQDNSLSGCLSSIGYARLPNL 251 (979)
Q Consensus 172 l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~l~~L 251 (979)
++.+++|+.|+|++|++++. ..+..+++|+.|+|++|+|+++ ..+.. +++|
T Consensus 105 l~~l~~L~~L~Ls~N~l~~l--~~l~~l~~L~~L~Ls~N~l~~l--~~l~~-------------------------l~~L 155 (605)
T 1m9s_A 105 LKDLKKLKSLSLEHNGISDI--NGLVHLPQLESLYLGNNKITDI--TVLSR-------------------------LTKL 155 (605)
T ss_dssp STTCTTCCEEECTTSCCCCC--GGGGGCTTCSEEECCSSCCCCC--GGGGS-------------------------CTTC
T ss_pred hccCCCCCEEEecCCCCCCC--ccccCCCccCEEECCCCccCCc--hhhcc-------------------------cCCC
Confidence 55566666666666666532 2355555555555555555544 23444 4455
Q ss_pred CEEEccCCccccccCcccccCCCCcEEeccccccccccCccccccccccceeccccccccc
Q 002021 252 EILSLWGNNFSGTIPRFIFNASKLSILDLEGNSFSGFIPNTFGNLRNLSWLVLSDNYLTSS 312 (979)
Q Consensus 252 ~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~ 312 (979)
+.|+|++|+|++..| +..+++|+.|+|++|.|++. ..|..+++|+.|+|++|.++..
T Consensus 156 ~~L~Ls~N~l~~~~~--l~~l~~L~~L~Ls~N~i~~l--~~l~~l~~L~~L~L~~N~l~~~ 212 (605)
T 1m9s_A 156 DTLSLEDNQISDIVP--LAGLTKLQNLYLSKNHISDL--RALAGLKNLDVLELFSQECLNK 212 (605)
T ss_dssp SEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCBC--GGGTTCTTCSEEECCSEEEECC
T ss_pred CEEECcCCcCCCchh--hccCCCCCEEECcCCCCCCC--hHHccCCCCCEEEccCCcCcCC
Confidence 555555555544333 44455555555555555543 2355555555555555555443
No 360
>1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A*
Probab=99.80 E-value=5.1e-22 Score=234.41 Aligned_cols=190 Identities=18% Similarity=0.112 Sum_probs=109.1
Q ss_pred cCCCCCCeeeccCCcccccCCccccccCcccEEeccccc-------------ccccCCccccCCCCCcEEE-ccCCccCc
Q 002021 93 GNLSSLQSLNLSFNRLFGSIPSAIFTTYTLKYVCLRGNQ-------------LSGTFPSFISNKSSLQHLD-LSSNALSG 158 (979)
Q Consensus 93 ~~l~~L~~L~L~~n~~~~~~p~~~~~l~~L~~L~L~~n~-------------l~~~~p~~l~~l~~L~~L~-Ls~N~l~~ 158 (979)
...++|+.|+|++|+++ .+|.+++.+++|+.|++++|. +.+.+|..++++++|+.|| ++.|.+.
T Consensus 346 ~~~~~L~~L~Ls~n~L~-~Lp~~i~~l~~L~~L~l~~n~~l~~l~~ll~~~~~~~~~~~~l~~l~~L~~L~~l~~n~~~- 423 (567)
T 1dce_A 346 ATDEQLFRCELSVEKST-VLQSELESCKELQELEPENKWCLLTIILLMRALDPLLYEKETLQYFSTLKAVDPMRAAYLD- 423 (567)
T ss_dssp STTTTSSSCCCCHHHHH-HHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHCTGGGHHHHHHHHHHHHHHCGGGHHHHH-
T ss_pred ccCccceeccCChhhHH-hhHHHHHHHHHHHHhccccchhhhhHHHHHHhcccccCCHHHHHHHHhcccCcchhhcccc-
Confidence 55677777777777775 667777777777777776664 3445555555555555555 4444331
Q ss_pred hhhhhhhccCCcccCCCCccceeecccccccccccccccCCCCCCceecCCCeeeecCCccccccCccceeeccCCCCcC
Q 002021 159 EIRANICREIPREFGNLPELELMSLAANNLQGKIPLKIGNLRNLEKLDIGDNKLVGIAPIAIFNVSTLKILGLQDNSLSG 238 (979)
Q Consensus 159 ~~~~~~~~~ip~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~ 238 (979)
.|+.+.+++|.+++..+ ..|++|+|++|+|+++ |. +.++++|+.|+|++|+|+.
T Consensus 424 ------------------~L~~l~l~~n~i~~l~~------~~L~~L~Ls~n~l~~l-p~-~~~l~~L~~L~Ls~N~l~~ 477 (567)
T 1dce_A 424 ------------------DLRSKFLLENSVLKMEY------ADVRVLHLAHKDLTVL-CH-LEQLLLVTHLDLSHNRLRA 477 (567)
T ss_dssp ------------------HHHHHHHHHHHHHHHHH------TTCSEEECTTSCCSSC-CC-GGGGTTCCEEECCSSCCCC
T ss_pred ------------------hhhhhhhhcccccccCc------cCceEEEecCCCCCCC-cC-ccccccCcEeecCcccccc
Confidence 23333444444442221 1355666666666654 33 5566666666666666653
Q ss_pred CCcccccCCCCCcCEEEccCCccccccCcccccCCCCcEEecccccccccc-Cccccccccccceeccccccccccc
Q 002021 239 CLSSIGYARLPNLEILSLWGNNFSGTIPRFIFNASKLSILDLEGNSFSGFI-PNTFGNLRNLSWLVLSDNYLTSSTQ 314 (979)
Q Consensus 239 ~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~-~~~~~~l~~L~~L~Ls~N~l~~~~~ 314 (979)
++. .+..+++|++|+|++|+|++ +| .++++++|++|+|++|+|++.. |..|+.+++|+.|+|++|.+++.++
T Consensus 478 lp~--~~~~l~~L~~L~Ls~N~l~~-lp-~l~~l~~L~~L~Ls~N~l~~~~~p~~l~~l~~L~~L~L~~N~l~~~~~ 550 (567)
T 1dce_A 478 LPP--ALAALRCLEVLQASDNALEN-VD-GVANLPRLQELLLCNNRLQQSAAIQPLVSCPRLVLLNLQGNSLCQEEG 550 (567)
T ss_dssp CCG--GGGGCTTCCEEECCSSCCCC-CG-GGTTCSSCCEEECCSSCCCSSSTTGGGGGCTTCCEEECTTSGGGGSSS
T ss_pred cch--hhhcCCCCCEEECCCCCCCC-Cc-ccCCCCCCcEEECCCCCCCCCCCcHHHhcCCCCCEEEecCCcCCCCcc
Confidence 322 34556666666666666654 44 5556666666666666666554 5566666666666666666655543
No 361
>1h6t_A Internalin B; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.6A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 2wqu_A 2uzy_A 2uzx_A 2wqv_A* 2wqw_A 2wqx_A 1d0b_A 1otn_A 1oto_A 1otm_A
Probab=99.80 E-value=1.7e-19 Score=195.38 Aligned_cols=171 Identities=25% Similarity=0.388 Sum_probs=93.2
Q ss_pred CCCcccEEEecCCCCCchhHHhhhcCCCCcEEEecCcccCCCccccccCCCCCceEecCCCcccccCCccccCCCcCceE
Q 002021 374 NLTNLRTIYLGGNKLNGSILITLSKLQKLQDLGLKDNKLEGSIPYDICNLAELYRLDLDGNKLSGSIPACFSNLTSLRIV 453 (979)
Q Consensus 374 ~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L 453 (979)
.+++|+.|++++|.++.. ..+..+++|++|++++|++++..+ +..+++|++|++++|++++. ..+..+++|++|
T Consensus 44 ~l~~L~~L~l~~~~i~~~--~~~~~l~~L~~L~L~~n~l~~~~~--l~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L 117 (291)
T 1h6t_A 44 ELNSIDQIIANNSDIKSV--QGIQYLPNVTKLFLNGNKLTDIKP--LANLKNLGWLFLDENKVKDL--SSLKDLKKLKSL 117 (291)
T ss_dssp HHHTCCEEECTTSCCCCC--TTGGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCCG--GGGTTCTTCCEE
T ss_pred hcCcccEEEccCCCcccC--hhHhcCCCCCEEEccCCccCCCcc--cccCCCCCEEECCCCcCCCC--hhhccCCCCCEE
Confidence 445555555555555543 124555555555555555554333 55555555555555555531 225555556666
Q ss_pred ecCCCccccccccccCcCCCcEEEeccccccCCCccccccccccceEeccCCccCcccchhhcCCcccceeecCCccccC
Q 002021 454 SLGSNELTSIPLTFWNLKDILNLNFSSNFLTGSLPLEIGSLKVLVGIDLSRNNFSGVIPTEIGGLKNLEYLFLGYNRLQG 533 (979)
Q Consensus 454 ~L~~N~l~~lp~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~ 533 (979)
++++|+++.++ .+..+++|+.|++++|++++. ..++.+++|+.|+|++|++++..| +..+++|+.|+|++|++++
T Consensus 118 ~L~~n~i~~~~-~l~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~L~~N~l~~~~~--l~~l~~L~~L~L~~N~i~~ 192 (291)
T 1h6t_A 118 SLEHNGISDIN-GLVHLPQLESLYLGNNKITDI--TVLSRLTKLDTLSLEDNQISDIVP--LAGLTKLQNLYLSKNHISD 192 (291)
T ss_dssp ECTTSCCCCCG-GGGGCTTCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCB
T ss_pred ECCCCcCCCCh-hhcCCCCCCEEEccCCcCCcc--hhhccCCCCCEEEccCCccccchh--hcCCCccCEEECCCCcCCC
Confidence 66666555543 344555555555555555543 345555566666666666654433 5556666666666666653
Q ss_pred CCCCcccccccccccccccccccc
Q 002021 534 SIPNSFGDLISLKFLNLSNNNLSG 557 (979)
Q Consensus 534 ~~p~~~~~l~~L~~L~Ls~N~l~~ 557 (979)
+| .+..+++|+.|++++|+++.
T Consensus 193 -l~-~l~~l~~L~~L~l~~n~i~~ 214 (291)
T 1h6t_A 193 -LR-ALAGLKNLDVLELFSQECLN 214 (291)
T ss_dssp -CG-GGTTCTTCSEEEEEEEEEEC
T ss_pred -Ch-hhccCCCCCEEECcCCcccC
Confidence 22 25556666666666666553
No 362
>2xot_A Amphoterin-induced protein 1; cell adhesion, neuronal protein, neurite growth regulation; HET: NAG BMA; 2.00A {Mus musculus}
Probab=99.80 E-value=1e-19 Score=203.79 Aligned_cols=177 Identities=26% Similarity=0.262 Sum_probs=115.3
Q ss_pred EEEecCcccCCCccccccCCCCCceEecCCCcccccCCcccc-CCCcCceEecCCCccccccc-cccCcCCCcEEEeccc
Q 002021 404 DLGLKDNKLEGSIPYDICNLAELYRLDLDGNKLSGSIPACFS-NLTSLRIVSLGSNELTSIPL-TFWNLKDILNLNFSSN 481 (979)
Q Consensus 404 ~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~-~l~~L~~L~L~~N~l~~lp~-~~~~l~~L~~L~ls~N 481 (979)
.++++++.++ .+|..+. ..++.|+|++|+|++..+..|. ++++|++|+|++|+|+.++. .|.++++|+.|+|++|
T Consensus 22 ~l~c~~~~l~-~iP~~~~--~~l~~L~Ls~N~l~~l~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls~N 98 (361)
T 2xot_A 22 ILSCSKQQLP-NVPQSLP--SYTALLDLSHNNLSRLRAEWTPTRLTNLHSLLLSHNHLNFISSEAFVPVPNLRYLDLSSN 98 (361)
T ss_dssp EEECCSSCCS-SCCSSCC--TTCSEEECCSSCCCEECTTSSSSCCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSS
T ss_pred EEEeCCCCcC-ccCccCC--CCCCEEECCCCCCCccChhhhhhcccccCEEECCCCcCCccChhhccCCCCCCEEECCCC
Confidence 3444444444 2443332 3456666666666666565565 66666777777676666653 4666667777777777
Q ss_pred cccCCCccccccccccceEeccCCccCcccchhhcCCcccceeecCCccccCCCCCcc---ccccccccccccccccccc
Q 002021 482 FLTGSLPLEIGSLKVLVGIDLSRNNFSGVIPTEIGGLKNLEYLFLGYNRLQGSIPNSF---GDLISLKFLNLSNNNLSGV 558 (979)
Q Consensus 482 ~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~---~~l~~L~~L~Ls~N~l~~~ 558 (979)
+|++..+..|..+.+|+.|+|++|+|++..|..|.++++|+.|+|++|+|++..+..| ..+++|+.|||++|+|++.
T Consensus 99 ~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~~~~l~~L~~L~L~~N~l~~l 178 (361)
T 2xot_A 99 HLHTLDEFLFSDLQALEVLLLYNNHIVVVDRNAFEDMAQLQKLYLSQNQISRFPVELIKDGNKLPKLMLLDLSSNKLKKL 178 (361)
T ss_dssp CCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCSCCGGGTC----CTTCCEEECCSSCCCCC
T ss_pred cCCcCCHHHhCCCcCCCEEECCCCcccEECHHHhCCcccCCEEECCCCcCCeeCHHHhcCcccCCcCCEEECCCCCCCcc
Confidence 7766666667777777777777777777777777777777777777777775444444 4577777777777777765
Q ss_pred CCccccCccc--cCeEeccCCcccccC
Q 002021 559 IPASLEKLSY--LEDLNLSFNQLEGKI 583 (979)
Q Consensus 559 ~p~~~~~l~~--L~~L~L~~N~l~~~~ 583 (979)
.+..+..++. ++.|+|++|+|.|..
T Consensus 179 ~~~~~~~l~~~~l~~l~l~~N~~~C~C 205 (361)
T 2xot_A 179 PLTDLQKLPAWVKNGLYLHNNPLECDC 205 (361)
T ss_dssp CHHHHHHSCHHHHTTEECCSSCEECCH
T ss_pred CHHHhhhccHhhcceEEecCCCccCCc
Confidence 5566666666 377777777777653
No 363
>2v9t_B SLIT homolog 2 protein N-product; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens} PDB: 2v9s_A
Probab=99.79 E-value=3.5e-19 Score=184.34 Aligned_cols=147 Identities=27% Similarity=0.325 Sum_probs=115.8
Q ss_pred ecCCCccccCCCCCcCCCCCCeeeccCCcccccCCccccccCcccEEecccccccccCCccccCCCCCcEEEccCCccCc
Q 002021 79 ISSLNLTGTIPSQLGNLSSLQSLNLSFNRLFGSIPSAIFTTYTLKYVCLRGNQLSGTFPSFISNKSSLQHLDLSSNALSG 158 (979)
Q Consensus 79 l~~~~l~g~~~~~l~~l~~L~~L~L~~n~~~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~ 158 (979)
+++++++ .+|..+. ++|++|+|++|++++..|..+..+++|++|+|++|++++..|..|.++++|++|+|++|.|++
T Consensus 18 c~~~~l~-~iP~~l~--~~l~~L~l~~n~i~~i~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~ 94 (220)
T 2v9t_B 18 CRGKGLT-EIPTNLP--ETITEIRLEQNTIKVIPPGAFSPYKKLRRIDLSNNQISELAPDAFQGLRSLNSLVLYGNKITE 94 (220)
T ss_dssp CTTSCCS-SCCSSCC--TTCCEEECCSSCCCEECTTSSTTCTTCCEEECCSSCCCEECTTTTTTCSSCCEEECCSSCCCC
T ss_pred cCCCCcC-cCCCccC--cCCCEEECCCCcCCCcCHhHhhCCCCCCEEECCCCcCCCcCHHHhhCCcCCCEEECCCCcCCc
Confidence 3455666 4666554 688999999999987777788888889999999999888888888888888888888888874
Q ss_pred hhhhhhhccCCc-ccCCCCccceeecccccccccccccccCCCCCCceecCCCeeeecCCccccccCccceeeccCCCCc
Q 002021 159 EIRANICREIPR-EFGNLPELELMSLAANNLQGKIPLKIGNLRNLEKLDIGDNKLVGIAPIAIFNVSTLKILGLQDNSLS 237 (979)
Q Consensus 159 ~~~~~~~~~ip~-~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~ 237 (979)
+|. .|.++++|++|+|++|++++..|..|..+++|++|+|++|+|+++.+..|..+++|+.|+|++|.+.
T Consensus 95 ---------l~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~~~ 165 (220)
T 2v9t_B 95 ---------LPKSLFEGLFSLQLLLLNANKINCLRVDAFQDLHNLNLLSLYDNKLQTIAKGTFSPLRAIQTMHLAQNPFI 165 (220)
T ss_dssp ---------CCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCEE
T ss_pred ---------cCHhHccCCCCCCEEECCCCCCCEeCHHHcCCCCCCCEEECCCCcCCEECHHHHhCCCCCCEEEeCCCCcC
Confidence 444 4677888888888888888777788888888888888888888877776776777777777666664
No 364
>1m9s_A Internalin B; cell invasion, GW domains, SH3 domains, signaling protein; 2.65A {Listeria monocytogenes} SCOP: b.1.18.15 b.34.11.1 b.34.11.1 b.34.11.1 c.10.2.1 PDB: 2y5q_A
Probab=99.79 E-value=1.8e-19 Score=213.89 Aligned_cols=182 Identities=24% Similarity=0.350 Sum_probs=108.7
Q ss_pred cCCCcccEEEecCCCCCchhHHhhhcCCCCcEEEecCcccCCCccccccCCCCCceEecCCCcccccCCccccCCCcCce
Q 002021 373 SNLTNLRTIYLGGNKLNGSILITLSKLQKLQDLGLKDNKLEGSIPYDICNLAELYRLDLDGNKLSGSIPACFSNLTSLRI 452 (979)
Q Consensus 373 ~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~ 452 (979)
..+++|+.|++++|.+.... .+..+++|+.|+|++|++.+..| +..+++|+.|+|++|+|.+. ..+..+++|++
T Consensus 40 ~~L~~L~~L~l~~n~i~~l~--~l~~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~Ls~N~l~~l--~~l~~l~~L~~ 113 (605)
T 1m9s_A 40 NELNSIDQIIANNSDIKSVQ--GIQYLPNVTKLFLNGNKLTDIKP--LTNLKNLGWLFLDENKIKDL--SSLKDLKKLKS 113 (605)
T ss_dssp HHHTTCCCCBCTTCCCCCCT--TGGGCTTCCEEECTTSCCCCCGG--GGGCTTCCEEECCSSCCCCC--TTSTTCTTCCE
T ss_pred hcCCCCCEEECcCCCCCCCh--HHccCCCCCEEEeeCCCCCCChh--hccCCCCCEEECcCCCCCCC--hhhccCCCCCE
Confidence 34555555555555555432 35555556666666665554333 55666666666666666532 24566666666
Q ss_pred EecCCCccccccccccCcCCCcEEEeccccccCCCccccccccccceEeccCCccCcccchhhcCCcccceeecCCcccc
Q 002021 453 VSLGSNELTSIPLTFWNLKDILNLNFSSNFLTGSLPLEIGSLKVLVGIDLSRNNFSGVIPTEIGGLKNLEYLFLGYNRLQ 532 (979)
Q Consensus 453 L~L~~N~l~~lp~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~ 532 (979)
|+|++|+|+.++ .+..+++|+.|+|++|++++. ..++.+++|+.|+|++|+|++..| +..+++|+.|+|++|+|+
T Consensus 114 L~Ls~N~l~~l~-~l~~l~~L~~L~Ls~N~l~~l--~~l~~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~Ls~N~i~ 188 (605)
T 1m9s_A 114 LSLEHNGISDIN-GLVHLPQLESLYLGNNKITDI--TVLSRLTKLDTLSLEDNQISDIVP--LAGLTKLQNLYLSKNHIS 188 (605)
T ss_dssp EECTTSCCCCCG-GGGGCTTCSEEECCSSCCCCC--GGGGSCTTCSEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCC
T ss_pred EEecCCCCCCCc-cccCCCccCEEECCCCccCCc--hhhcccCCCCEEECcCCcCCCchh--hccCCCCCEEECcCCCCC
Confidence 666666666653 355666666666666666653 456666667777777777765555 666677777777777776
Q ss_pred CCCCCcccccccccccccccccccccCCccccCcc
Q 002021 533 GSIPNSFGDLISLKFLNLSNNNLSGVIPASLEKLS 567 (979)
Q Consensus 533 ~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~ 567 (979)
+. ..+..+++|+.|+|++|++++.....+..+.
T Consensus 189 ~l--~~l~~l~~L~~L~L~~N~l~~~p~~~~~~l~ 221 (605)
T 1m9s_A 189 DL--RALAGLKNLDVLELFSQECLNKPINHQSNLV 221 (605)
T ss_dssp BC--GGGTTCTTCSEEECCSEEEECCCCCCCSSCE
T ss_pred CC--hHHccCCCCCEEEccCCcCcCCcccccccEE
Confidence 43 2466667777777777777654333333333
No 365
>3e6j_A Variable lymphocyte receptor diversity region; variable lymphocyte receptors, VLR, leucine-rich repeat, LRR adaptive immunity, immune system; HET: DR2; 1.67A {Petromyzon marinus}
Probab=99.78 E-value=8.7e-19 Score=182.67 Aligned_cols=154 Identities=26% Similarity=0.336 Sum_probs=112.1
Q ss_pred ceEecCCCcccccCCccccCCCcCceEecCCCccccc-cccccCcCCCcEEEeccccccCCCccccccccccceEeccCC
Q 002021 427 YRLDLDGNKLSGSIPACFSNLTSLRIVSLGSNELTSI-PLTFWNLKDILNLNFSSNFLTGSLPLEIGSLKVLVGIDLSRN 505 (979)
Q Consensus 427 ~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~l-p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~Ls~N 505 (979)
+.++.++++++ .+|..+. ++|++|+|++|+|+.+ |..+..+++|+.|+|++|+|++..+..|..+++|+.|+|++|
T Consensus 22 ~~v~c~~~~l~-~ip~~~~--~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~i~~~~~~~l~~L~~L~Ls~N 98 (229)
T 3e6j_A 22 TTVDCRSKRHA-SVPAGIP--TNAQILYLHDNQITKLEPGVFDSLINLKELYLGSNQLGALPVGVFDSLTQLTVLDLGTN 98 (229)
T ss_dssp TEEECTTSCCS-SCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred CEeEccCCCcC-ccCCCCC--CCCCEEEcCCCccCccCHHHhhCccCCcEEECCCCCCCCcChhhcccCCCcCEEECCCC
Confidence 44555555554 3333332 5566666666666654 334556666666666666666555556677788888888888
Q ss_pred ccCcccchhhcCCcccceeecCCccccCCCCCcccccccccccccccccccccCCccccCccccCeEeccCCcccccCC
Q 002021 506 NFSGVIPTEIGGLKNLEYLFLGYNRLQGSIPNSFGDLISLKFLNLSNNNLSGVIPASLEKLSYLEDLNLSFNQLEGKIP 584 (979)
Q Consensus 506 ~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p 584 (979)
+|++..+..|..+++|++|+|++|+|+ .+|..+..+++|++|+|++|+|++..+..|..+++|+.|+|++|+++|..+
T Consensus 99 ~l~~l~~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c~c~ 176 (229)
T 3e6j_A 99 QLTVLPSAVFDRLVHLKELFMCCNKLT-ELPRGIERLTHLTHLALDQNQLKSIPHGAFDRLSSLTHAYLFGNPWDCECR 176 (229)
T ss_dssp CCCCCCTTTTTTCTTCCEEECCSSCCC-SCCTTGGGCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECTTSCBCTTBG
T ss_pred cCCccChhHhCcchhhCeEeccCCccc-ccCcccccCCCCCEEECCCCcCCccCHHHHhCCCCCCEEEeeCCCccCCcc
Confidence 888777777888888888888888888 678888888888888888888887777778888888888888888888765
No 366
>2xot_A Amphoterin-induced protein 1; cell adhesion, neuronal protein, neurite growth regulation; HET: NAG BMA; 2.00A {Mus musculus}
Probab=99.78 E-value=5e-19 Score=198.28 Aligned_cols=127 Identities=26% Similarity=0.228 Sum_probs=63.0
Q ss_pred EEEecCCCccccCCCCCcCCCCCCeeeccCCcccccCCcccc-ccCcccEEecccccccccCCccccCCCCCcEEEccCC
Q 002021 76 VLNISSLNLTGTIPSQLGNLSSLQSLNLSFNRLFGSIPSAIF-TTYTLKYVCLRGNQLSGTFPSFISNKSSLQHLDLSSN 154 (979)
Q Consensus 76 ~l~l~~~~l~g~~~~~l~~l~~L~~L~L~~n~~~~~~p~~~~-~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~N 154 (979)
.+++++++|+. +|..+. +.+++|||++|++++..+..+. .+++|++|+|++|+|++..|..|.++++|++|||++|
T Consensus 22 ~l~c~~~~l~~-iP~~~~--~~l~~L~Ls~N~l~~l~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls~N 98 (361)
T 2xot_A 22 ILSCSKQQLPN-VPQSLP--SYTALLDLSHNNLSRLRAEWTPTRLTNLHSLLLSHNHLNFISSEAFVPVPNLRYLDLSSN 98 (361)
T ss_dssp EEECCSSCCSS-CCSSCC--TTCSEEECCSSCCCEECTTSSSSCCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSS
T ss_pred EEEeCCCCcCc-cCccCC--CCCCEEECCCCCCCccChhhhhhcccccCEEECCCCcCCccChhhccCCCCCCEEECCCC
Confidence 45566666763 555443 3466677776666655444444 5555555555555555554455555555555555555
Q ss_pred ccCchhhhhhhccCCcccCCCCccceeecccccccccccccccCCCCCCceecCCCeee
Q 002021 155 ALSGEIRANICREIPREFGNLPELELMSLAANNLQGKIPLKIGNLRNLEKLDIGDNKLV 213 (979)
Q Consensus 155 ~l~~~~~~~~~~~ip~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~ 213 (979)
+|++. .+..|.++++|++|+|++|++++..|..|.++++|++|+|++|+|+
T Consensus 99 ~l~~~--------~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~ 149 (361)
T 2xot_A 99 HLHTL--------DEFLFSDLQALEVLLLYNNHIVVVDRNAFEDMAQLQKLYLSQNQIS 149 (361)
T ss_dssp CCCEE--------CTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCC
T ss_pred cCCcC--------CHHHhCCCcCCCEEECCCCcccEECHHHhCCcccCCEEECCCCcCC
Confidence 55421 1223444444444444444444333333333333333333333333
No 367
>1w8a_A SLIT protein; signaling protein, secreted protein, AXON guidance, leucine-rich repeat glycoprotein, EGF-like domain, signal protein; 2.8A {Drosophila melanogaster} SCOP: c.10.2.7
Probab=99.78 E-value=1.5e-19 Score=182.86 Aligned_cols=155 Identities=29% Similarity=0.374 Sum_probs=84.1
Q ss_pred ceEecCCCccccccccccCcCCCcEEEeccccccCCCcc-ccccccccceEeccCCccCcccchhhcCCcccceeecCCc
Q 002021 451 RIVSLGSNELTSIPLTFWNLKDILNLNFSSNFLTGSLPL-EIGSLKVLVGIDLSRNNFSGVIPTEIGGLKNLEYLFLGYN 529 (979)
Q Consensus 451 ~~L~L~~N~l~~lp~~~~~l~~L~~L~ls~N~l~~~~p~-~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N 529 (979)
+++++++|+++++|..+.. +++.|++++|++++..+. .|+.+++|+.|+|++|+|++..|..|.++++|++|+|++|
T Consensus 11 ~~l~~s~~~l~~ip~~~~~--~l~~L~l~~n~i~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N 88 (192)
T 1w8a_A 11 TTVDCTGRGLKEIPRDIPL--HTTELLLNDNELGRISSDGLFGRLPHLVKLELKRNQLTGIEPNAFEGASHIQELQLGEN 88 (192)
T ss_dssp TEEECTTSCCSSCCSCCCT--TCSEEECCSCCCCSBCCSCSGGGCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSC
T ss_pred CEEEcCCCCcCcCccCCCC--CCCEEECCCCcCCccCCccccccCCCCCEEECCCCCCCCcCHhHcCCcccCCEEECCCC
Confidence 3444555555555543322 455555555555544433 2555566666666666666555666666666666666666
Q ss_pred cccCCCCCcccccccccccccccccccccCCccccCccccCeEeccCCcccccCCCCCCCCCcccccccCCccccCCC
Q 002021 530 RLQGSIPNSFGDLISLKFLNLSNNNLSGVIPASLEKLSYLEDLNLSFNQLEGKIPRGGSFGNFSAQSFEGNELLCGSP 607 (979)
Q Consensus 530 ~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~~~~~~~~~~N~~~c~~p 607 (979)
+|++..|..|.++++|++|+|++|+|++.+|..+..+++|+.|+|++|+|+|.++.......+....+.++...|+.|
T Consensus 89 ~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~c~c~l~~~~~~l~~~~~~~~~~~C~~P 166 (192)
T 1w8a_A 89 KIKEISNKMFLGLHQLKTLNLYDNQISCVMPGSFEHLNSLTSLNLASNPFNCNCHLAWFAEWLRKKSLNGGAARCGAP 166 (192)
T ss_dssp CCCEECSSSSTTCTTCCEEECCSSCCCEECTTSSTTCTTCCEEECTTCCBCCSGGGHHHHHHHHHHCCSGGGCBBCSS
T ss_pred cCCccCHHHhcCCCCCCEEECCCCcCCeeCHHHhhcCCCCCEEEeCCCCccCcCcchHHHHHHHHcCCCCCCCCCCCC
Confidence 666555555666666666666666666666666666666666666666666555421111112222344455555544
No 368
>2v70_A SLIT-2, SLIT homolog 2 protein N-product; neurogenesis, glycoprotein, secreted, chemotaxis, LRR structural protein, differentiation; HET: NAG; 3.01A {Homo sapiens}
Probab=99.77 E-value=1.1e-18 Score=180.77 Aligned_cols=153 Identities=25% Similarity=0.278 Sum_probs=112.6
Q ss_pred EEEecCcccCCCccccccCCCCCceEecCCCcccccCC-ccccCCCcCceEecCCCccccccc-cccCcCCCcEEEeccc
Q 002021 404 DLGLKDNKLEGSIPYDICNLAELYRLDLDGNKLSGSIP-ACFSNLTSLRIVSLGSNELTSIPL-TFWNLKDILNLNFSSN 481 (979)
Q Consensus 404 ~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~-~~~~~l~~L~~L~L~~N~l~~lp~-~~~~l~~L~~L~ls~N 481 (979)
.+++++|.++. +|..+. ..+++|+|++|+|++..+ ..|..+++|++|+|++|+|+.++. .|..+++|+.|+|++|
T Consensus 15 ~l~~s~n~l~~-iP~~~~--~~~~~L~L~~N~l~~~~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls~N 91 (220)
T 2v70_A 15 TVDCSNQKLNK-IPEHIP--QYTAELRLNNNEFTVLEATGIFKKLPQLRKINFSNNKITDIEEGAFEGASGVNEILLTSN 91 (220)
T ss_dssp EEECCSSCCSS-CCSCCC--TTCSEEECCSSCCCEECCCCCGGGCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSS
T ss_pred EeEeCCCCccc-CccCCC--CCCCEEEcCCCcCCccCchhhhccCCCCCEEECCCCcCCEECHHHhCCCCCCCEEECCCC
Confidence 45555555542 444332 345677777777776543 446777777777777777776655 5777777777777788
Q ss_pred cccCCCccccccccccceEeccCCccCcccchhhcCCcccceeecCCccccCCCCCcccccccccccccccccccccC
Q 002021 482 FLTGSLPLEIGSLKVLVGIDLSRNNFSGVIPTEIGGLKNLEYLFLGYNRLQGSIPNSFGDLISLKFLNLSNNNLSGVI 559 (979)
Q Consensus 482 ~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~ 559 (979)
++++..|..|..+++|+.|+|++|+|++..|..|.++++|++|+|++|+|++..|..|..+++|+.|+|++|.+++..
T Consensus 92 ~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~c~c 169 (220)
T 2v70_A 92 RLENVQHKMFKGLESLKTLMLRSNRITCVGNDSFIGLSSVRLLSLYDNQITTVAPGAFDTLHSLSTLNLLANPFNCNC 169 (220)
T ss_dssp CCCCCCGGGGTTCSSCCEEECTTSCCCCBCTTSSTTCTTCSEEECTTSCCCCBCTTTTTTCTTCCEEECCSCCEECSG
T ss_pred ccCccCHhHhcCCcCCCEEECCCCcCCeECHhHcCCCccCCEEECCCCcCCEECHHHhcCCCCCCEEEecCcCCcCCC
Confidence 887777777888888888888888888877888888888888888888888777888888888888888888887553
No 369
>1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A*
Probab=99.77 E-value=2.6e-21 Score=228.35 Aligned_cols=199 Identities=22% Similarity=0.193 Sum_probs=92.0
Q ss_pred cccEEEccCccccCCCCccccCCCcccEEEecCCCCCchhHHhhhcCCCCcEEEecCcccCCCccccccCCCCCceEe-c
Q 002021 353 SLEEFKMSNCNISGGIPEEISNLTNLRTIYLGGNKLNGSILITLSKLQKLQDLGLKDNKLEGSIPYDICNLAELYRLD-L 431 (979)
Q Consensus 353 ~L~~L~L~~n~i~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~-L 431 (979)
+|+.|+|++|+++ .+|+.++++++|+.|++++|......+..+ ..+.+.+..|..++.+++|+.|+ +
T Consensus 350 ~L~~L~Ls~n~L~-~Lp~~i~~l~~L~~L~l~~n~~l~~l~~ll-----------~~~~~~~~~~~~l~~l~~L~~L~~l 417 (567)
T 1dce_A 350 QLFRCELSVEKST-VLQSELESCKELQELEPENKWCLLTIILLM-----------RALDPLLYEKETLQYFSTLKAVDPM 417 (567)
T ss_dssp TSSSCCCCHHHHH-HHHHHHHHHHHHHHHCTTCHHHHHHHHHHH-----------HHHCTGGGHHHHHHHHHHHHHHCGG
T ss_pred cceeccCChhhHH-hhHHHHHHHHHHHHhccccchhhhhHHHHH-----------HhcccccCCHHHHHHHHhcccCcch
Confidence 3444444444444 355666666666666665543110111000 01113344555555555555555 4
Q ss_pred CCCcccccCCccccCCCcCceEecCCCccccccccccCcCCCcEEEeccccccCCCccccccccccceEeccCCccCccc
Q 002021 432 DGNKLSGSIPACFSNLTSLRIVSLGSNELTSIPLTFWNLKDILNLNFSSNFLTGSLPLEIGSLKVLVGIDLSRNNFSGVI 511 (979)
Q Consensus 432 s~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~lp~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~ 511 (979)
+.|.+. +|+.+.+++|.++.+|.. .|+.|+|++|+|++ +|. ++.+++|+.|+|++|+|+ .+
T Consensus 418 ~~n~~~-----------~L~~l~l~~n~i~~l~~~-----~L~~L~Ls~n~l~~-lp~-~~~l~~L~~L~Ls~N~l~-~l 478 (567)
T 1dce_A 418 RAAYLD-----------DLRSKFLLENSVLKMEYA-----DVRVLHLAHKDLTV-LCH-LEQLLLVTHLDLSHNRLR-AL 478 (567)
T ss_dssp GHHHHH-----------HHHHHHHHHHHHHHHHHT-----TCSEEECTTSCCSS-CCC-GGGGTTCCEEECCSSCCC-CC
T ss_pred hhcccc-----------hhhhhhhhcccccccCcc-----CceEEEecCCCCCC-CcC-ccccccCcEeecCccccc-cc
Confidence 444332 233334444444433321 24445555555443 333 444555555555555554 34
Q ss_pred chhhcCCcccceeecCCccccCCCCCcccccccccccccccccccccC-CccccCccccCeEeccCCcccccCC
Q 002021 512 PTEIGGLKNLEYLFLGYNRLQGSIPNSFGDLISLKFLNLSNNNLSGVI-PASLEKLSYLEDLNLSFNQLEGKIP 584 (979)
Q Consensus 512 p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~-p~~~~~l~~L~~L~L~~N~l~~~~p 584 (979)
|..|+++++|+.|+|++|+|++ +| .|+++++|+.|+|++|+|++.+ |..+..+++|+.|+|++|++++.+|
T Consensus 479 p~~~~~l~~L~~L~Ls~N~l~~-lp-~l~~l~~L~~L~Ls~N~l~~~~~p~~l~~l~~L~~L~L~~N~l~~~~~ 550 (567)
T 1dce_A 479 PPALAALRCLEVLQASDNALEN-VD-GVANLPRLQELLLCNNRLQQSAAIQPLVSCPRLVLLNLQGNSLCQEEG 550 (567)
T ss_dssp CGGGGGCTTCCEEECCSSCCCC-CG-GGTTCSSCCEEECCSSCCCSSSTTGGGGGCTTCCEEECTTSGGGGSSS
T ss_pred chhhhcCCCCCEEECCCCCCCC-Cc-ccCCCCCCcEEECCCCCCCCCCCcHHHhcCCCCCEEEecCCcCCCCcc
Confidence 4445555555555555555543 33 4445555555555555555443 4455555555555555555554444
No 370
>4ezg_A Putative uncharacterized protein; internalin-A, leucine-rich repeat protein, structural genomi center for structural genomics, JCSG; HET: MSE; 1.50A {Listeria monocytogenes}
Probab=99.76 E-value=1.4e-18 Score=176.58 Aligned_cols=154 Identities=18% Similarity=0.244 Sum_probs=120.3
Q ss_pred cCCCCCceEecCCCcccccCCccccCCCcCceEecCCCccccccccccCcCCCcEEEeccccccCCCccccccccccceE
Q 002021 421 CNLAELYRLDLDGNKLSGSIPACFSNLTSLRIVSLGSNELTSIPLTFWNLKDILNLNFSSNFLTGSLPLEIGSLKVLVGI 500 (979)
Q Consensus 421 ~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~lp~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L 500 (979)
..+++|+.|++++|.++ .+| .+..+++|++|++++|.++.++ .+..+++|++|++++|++++..|..++.+++|+.|
T Consensus 41 ~~l~~L~~L~l~~n~i~-~l~-~l~~l~~L~~L~l~~n~~~~~~-~l~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L 117 (197)
T 4ezg_A 41 AQMNSLTYITLANINVT-DLT-GIEYAHNIKDLTINNIHATNYN-PISGLSNLERLRIMGKDVTSDKIPNLSGLTSLTLL 117 (197)
T ss_dssp HHHHTCCEEEEESSCCS-CCT-TGGGCTTCSEEEEESCCCSCCG-GGTTCTTCCEEEEECTTCBGGGSCCCTTCTTCCEE
T ss_pred hhcCCccEEeccCCCcc-ChH-HHhcCCCCCEEEccCCCCCcch-hhhcCCCCCEEEeECCccCcccChhhcCCCCCCEE
Confidence 45566777777777776 344 5677777777777777776655 66778888888888888887778888888899999
Q ss_pred eccCCccCcccchhhcCCcccceeecCCcc-ccCCCCCcccccccccccccccccccccCCccccCccccCeEeccCCcc
Q 002021 501 DLSRNNFSGVIPTEIGGLKNLEYLFLGYNR-LQGSIPNSFGDLISLKFLNLSNNNLSGVIPASLEKLSYLEDLNLSFNQL 579 (979)
Q Consensus 501 ~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~-l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l 579 (979)
++++|++++..|..++.+++|++|+|++|+ ++ .+| .+..+++|+.|++++|++++. + .+..+++|+.|++++|++
T Consensus 118 ~Ls~n~i~~~~~~~l~~l~~L~~L~L~~n~~i~-~~~-~l~~l~~L~~L~l~~n~i~~~-~-~l~~l~~L~~L~l~~N~i 193 (197)
T 4ezg_A 118 DISHSAHDDSILTKINTLPKVNSIDLSYNGAIT-DIM-PLKTLPELKSLNIQFDGVHDY-R-GIEDFPKLNQLYAFSQTI 193 (197)
T ss_dssp ECCSSBCBGGGHHHHTTCSSCCEEECCSCTBCC-CCG-GGGGCSSCCEEECTTBCCCCC-T-TGGGCSSCCEEEECBC--
T ss_pred EecCCccCcHhHHHHhhCCCCCEEEccCCCCcc-ccH-hhcCCCCCCEEECCCCCCcCh-H-HhccCCCCCEEEeeCccc
Confidence 999999988888888999999999999998 65 555 688899999999999999853 3 788889999999999988
Q ss_pred cc
Q 002021 580 EG 581 (979)
Q Consensus 580 ~~ 581 (979)
.+
T Consensus 194 ~~ 195 (197)
T 4ezg_A 194 GG 195 (197)
T ss_dssp --
T ss_pred CC
Confidence 64
No 371
>1xeu_A Internalin C; cellular invasion, leucine-rich repeat, cell invasion; 2.05A {Listeria monocytogenes}
Probab=99.76 E-value=6.6e-19 Score=187.67 Aligned_cols=170 Identities=20% Similarity=0.269 Sum_probs=99.6
Q ss_pred CCcccEEEecCCCCCchhHHhhhcCCCCcEEEecCcccCCCccccccCCCCCceEecCCCcccccCCccccCCCcCceEe
Q 002021 375 LTNLRTIYLGGNKLNGSILITLSKLQKLQDLGLKDNKLEGSIPYDICNLAELYRLDLDGNKLSGSIPACFSNLTSLRIVS 454 (979)
Q Consensus 375 l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~ 454 (979)
+.++..+++++|.+++.. .+..+++|+.|++++|.++. ++ .+..+++|+.|+|++|+|++..+ +..+++|++|+
T Consensus 18 l~~l~~l~l~~~~i~~~~--~~~~l~~L~~L~l~~n~i~~-l~-~l~~l~~L~~L~L~~N~i~~~~~--l~~l~~L~~L~ 91 (263)
T 1xeu_A 18 LANAVKQNLGKQSVTDLV--SQKELSGVQNFNGDNSNIQS-LA-GMQFFTNLKELHLSHNQISDLSP--LKDLTKLEELS 91 (263)
T ss_dssp HHHHHHHHHTCSCTTSEE--CHHHHTTCSEEECTTSCCCC-CT-TGGGCTTCCEEECCSSCCCCCGG--GTTCSSCCEEE
T ss_pred HHHHHHHHhcCCCccccc--chhhcCcCcEEECcCCCccc-ch-HHhhCCCCCEEECCCCccCCChh--hccCCCCCEEE
Confidence 445555566666665433 45556666666666666653 33 45666666666666666665433 66666666666
Q ss_pred cCCCccccccccccCcCCCcEEEeccccccCCCccccccccccceEeccCCccCcccchhhcCCcccceeecCCccccCC
Q 002021 455 LGSNELTSIPLTFWNLKDILNLNFSSNFLTGSLPLEIGSLKVLVGIDLSRNNFSGVIPTEIGGLKNLEYLFLGYNRLQGS 534 (979)
Q Consensus 455 L~~N~l~~lp~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~ 534 (979)
|++|+++.+|.... ++|+.|++++|++++. ..++.+++|+.|+|++|++++. + .+..+++|+.|+|++|++++.
T Consensus 92 L~~N~l~~l~~~~~--~~L~~L~L~~N~l~~~--~~l~~l~~L~~L~Ls~N~i~~~-~-~l~~l~~L~~L~L~~N~i~~~ 165 (263)
T 1xeu_A 92 VNRNRLKNLNGIPS--ACLSRLFLDNNELRDT--DSLIHLKNLEILSIRNNKLKSI-V-MLGFLSKLEVLDLHGNEITNT 165 (263)
T ss_dssp CCSSCCSCCTTCCC--SSCCEEECCSSCCSBS--GGGTTCTTCCEEECTTSCCCBC-G-GGGGCTTCCEEECTTSCCCBC
T ss_pred CCCCccCCcCcccc--CcccEEEccCCccCCC--hhhcCcccccEEECCCCcCCCC-h-HHccCCCCCEEECCCCcCcch
Confidence 66666666654322 5566666666666542 2355566666666666666543 2 455666666666666666643
Q ss_pred CCCccccccccccccccccccccc
Q 002021 535 IPNSFGDLISLKFLNLSNNNLSGV 558 (979)
Q Consensus 535 ~p~~~~~l~~L~~L~Ls~N~l~~~ 558 (979)
..+..+++|+.|++++|++++.
T Consensus 166 --~~l~~l~~L~~L~l~~N~~~~~ 187 (263)
T 1xeu_A 166 --GGLTRLKKVNWIDLTGQKCVNE 187 (263)
T ss_dssp --TTSTTCCCCCEEEEEEEEEECC
T ss_pred --HHhccCCCCCEEeCCCCcccCC
Confidence 4455566666666666666543
No 372
>4b8c_D Glucose-repressible alcohol dehydrogenase transcr effector; hydrolase-cell cycle complex; 3.41A {Saccharomyces cerevisiae S288C}
Probab=99.75 E-value=6.1e-19 Score=214.84 Aligned_cols=143 Identities=27% Similarity=0.316 Sum_probs=77.1
Q ss_pred hHHhhhcCCCCcEEEecCcccCCCccccccCCCCCceEecCCCcccccCCccccCCCcCceEecCCCccccccccccCcC
Q 002021 392 ILITLSKLQKLQDLGLKDNKLEGSIPYDICNLAELYRLDLDGNKLSGSIPACFSNLTSLRIVSLGSNELTSIPLTFWNLK 471 (979)
Q Consensus 392 ~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~lp~~~~~l~ 471 (979)
.+..|..++.|+.|+|++|.+. .+|..+..+++|++|+|++|+|+ .+|..|+++++|++|+|++|+|+.+|..+++++
T Consensus 216 ~~~~~~~l~~L~~L~Ls~n~l~-~l~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~Ls~N~l~~lp~~~~~l~ 293 (727)
T 4b8c_D 216 PKDSKYDDQLWHALDLSNLQIF-NISANIFKYDFLTRLYLNGNSLT-ELPAEIKNLSNLRVLDLSHNRLTSLPAELGSCF 293 (727)
T ss_dssp ------CCCCCCEEECTTSCCS-CCCGGGGGCCSCSCCBCTTSCCS-CCCGGGGGGTTCCEEECTTSCCSSCCSSGGGGT
T ss_pred ChhhhccCCCCcEEECCCCCCC-CCChhhcCCCCCCEEEeeCCcCc-ccChhhhCCCCCCEEeCcCCcCCccChhhcCCC
Confidence 3455555555566666665555 34444555556666666666665 455555556666666666666665555555555
Q ss_pred CCcEEEeccccccCCCccccccccccceEeccCCccCcccchhhcCCcc-cceeecCCccccCCCCC
Q 002021 472 DILNLNFSSNFLTGSLPLEIGSLKVLVGIDLSRNNFSGVIPTEIGGLKN-LEYLFLGYNRLQGSIPN 537 (979)
Q Consensus 472 ~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~-L~~L~Ls~N~l~~~~p~ 537 (979)
+|+.|+|++|.|+ .+|..|+.+++|+.|+|++|.|++.+|..+..+.. +..|+|++|.+++.+|.
T Consensus 294 ~L~~L~L~~N~l~-~lp~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~~~~~~~l~l~~N~l~~~~p~ 359 (727)
T 4b8c_D 294 QLKYFYFFDNMVT-TLPWEFGNLCNLQFLGVEGNPLEKQFLKILTEKSVTGLIFYLRDNRPEIPLPH 359 (727)
T ss_dssp TCSEEECCSSCCC-CCCSSTTSCTTCCCEECTTSCCCSHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
T ss_pred CCCEEECCCCCCC-ccChhhhcCCCccEEeCCCCccCCCChHHHhhcchhhhHHhhccCcccCcCcc
Confidence 5666666655555 34555555555555666666655555555544322 22355555555555553
No 373
>1xeu_A Internalin C; cellular invasion, leucine-rich repeat, cell invasion; 2.05A {Listeria monocytogenes}
Probab=99.75 E-value=1.2e-18 Score=185.65 Aligned_cols=167 Identities=18% Similarity=0.273 Sum_probs=107.2
Q ss_pred ccEEEccCccccCCCCccccCCCcccEEEecCCCCCchhHHhhhcCCCCcEEEecCcccCCCccccccCCCCCceEecCC
Q 002021 354 LEEFKMSNCNISGGIPEEISNLTNLRTIYLGGNKLNGSILITLSKLQKLQDLGLKDNKLEGSIPYDICNLAELYRLDLDG 433 (979)
Q Consensus 354 L~~L~L~~n~i~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~ 433 (979)
+..+++++|.+++.. .+..+++|++|++++|.++... .+..+++|+.|++++|++++..+ +..+++|+.|+|++
T Consensus 21 l~~l~l~~~~i~~~~--~~~~l~~L~~L~l~~n~i~~l~--~l~~l~~L~~L~L~~N~i~~~~~--l~~l~~L~~L~L~~ 94 (263)
T 1xeu_A 21 AVKQNLGKQSVTDLV--SQKELSGVQNFNGDNSNIQSLA--GMQFFTNLKELHLSHNQISDLSP--LKDLTKLEELSVNR 94 (263)
T ss_dssp HHHHHHTCSCTTSEE--CHHHHTTCSEEECTTSCCCCCT--TGGGCTTCCEEECCSSCCCCCGG--GTTCSSCCEEECCS
T ss_pred HHHHHhcCCCccccc--chhhcCcCcEEECcCCCcccch--HHhhCCCCCEEECCCCccCCChh--hccCCCCCEEECCC
Confidence 444444555554322 3555666666666666666433 56666666666666666665433 66667777777777
Q ss_pred CcccccCCccccCCCcCceEecCCCccccccccccCcCCCcEEEeccccccCCCccccccccccceEeccCCccCcccch
Q 002021 434 NKLSGSIPACFSNLTSLRIVSLGSNELTSIPLTFWNLKDILNLNFSSNFLTGSLPLEIGSLKVLVGIDLSRNNFSGVIPT 513 (979)
Q Consensus 434 N~l~~~~~~~~~~l~~L~~L~L~~N~l~~lp~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~ 513 (979)
|++++. |. +.. ++|++|+|++|+++.++ .+..+++|+.|++++|++++. + .++.+++|+.|+|++|++++. .
T Consensus 95 N~l~~l-~~-~~~-~~L~~L~L~~N~l~~~~-~l~~l~~L~~L~Ls~N~i~~~-~-~l~~l~~L~~L~L~~N~i~~~--~ 166 (263)
T 1xeu_A 95 NRLKNL-NG-IPS-ACLSRLFLDNNELRDTD-SLIHLKNLEILSIRNNKLKSI-V-MLGFLSKLEVLDLHGNEITNT--G 166 (263)
T ss_dssp SCCSCC-TT-CCC-SSCCEEECCSSCCSBSG-GGTTCTTCCEEECTTSCCCBC-G-GGGGCTTCCEEECTTSCCCBC--T
T ss_pred CccCCc-Cc-ccc-CcccEEEccCCccCCCh-hhcCcccccEEECCCCcCCCC-h-HHccCCCCCEEECCCCcCcch--H
Confidence 777643 22 222 66777777777777665 466677777777777777754 3 566777777777777777755 5
Q ss_pred hhcCCcccceeecCCccccCC
Q 002021 514 EIGGLKNLEYLFLGYNRLQGS 534 (979)
Q Consensus 514 ~~~~l~~L~~L~Ls~N~l~~~ 534 (979)
.+..+++|+.|++++|++++.
T Consensus 167 ~l~~l~~L~~L~l~~N~~~~~ 187 (263)
T 1xeu_A 167 GLTRLKKVNWIDLTGQKCVNE 187 (263)
T ss_dssp TSTTCCCCCEEEEEEEEEECC
T ss_pred HhccCCCCCEEeCCCCcccCC
Confidence 677777777777777777754
No 374
>1w8a_A SLIT protein; signaling protein, secreted protein, AXON guidance, leucine-rich repeat glycoprotein, EGF-like domain, signal protein; 2.8A {Drosophila melanogaster} SCOP: c.10.2.7
Probab=99.75 E-value=2.9e-18 Score=173.43 Aligned_cols=176 Identities=24% Similarity=0.300 Sum_probs=127.8
Q ss_pred ceEecCCCcccccCCccccCCCcCceEecCCCcccccccc--ccCcCCCcEEEeccccccCCCccccccccccceEeccC
Q 002021 427 YRLDLDGNKLSGSIPACFSNLTSLRIVSLGSNELTSIPLT--FWNLKDILNLNFSSNFLTGSLPLEIGSLKVLVGIDLSR 504 (979)
Q Consensus 427 ~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~lp~~--~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~Ls~ 504 (979)
+.+++++|+++ .+|..+.. +|++|++++|+|+.++.. +..+++|+.|+|++|+|++..|..|..+++|+.|+|++
T Consensus 11 ~~l~~s~~~l~-~ip~~~~~--~l~~L~l~~n~i~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~ 87 (192)
T 1w8a_A 11 TTVDCTGRGLK-EIPRDIPL--HTTELLLNDNELGRISSDGLFGRLPHLVKLELKRNQLTGIEPNAFEGASHIQELQLGE 87 (192)
T ss_dssp TEEECTTSCCS-SCCSCCCT--TCSEEECCSCCCCSBCCSCSGGGCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCS
T ss_pred CEEEcCCCCcC-cCccCCCC--CCCEEECCCCcCCccCCccccccCCCCCEEECCCCCCCCcCHhHcCCcccCCEEECCC
Confidence 56777777775 45554433 677778888877777653 67788888888888888877788888888888888888
Q ss_pred CccCcccchhhcCCcccceeecCCccccCCCCCcccccccccccccccccccccCCccccCccccCeEeccCCcccccCC
Q 002021 505 NNFSGVIPTEIGGLKNLEYLFLGYNRLQGSIPNSFGDLISLKFLNLSNNNLSGVIPASLEKLSYLEDLNLSFNQLEGKIP 584 (979)
Q Consensus 505 N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p 584 (979)
|+|++..|..|.++++|++|+|++|+|++..|..|..+++|++|+|++|.+++..+-.. -...++...+.++...|..|
T Consensus 88 N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~c~c~l~~-~~~~l~~~~~~~~~~~C~~P 166 (192)
T 1w8a_A 88 NKIKEISNKMFLGLHQLKTLNLYDNQISCVMPGSFEHLNSLTSLNLASNPFNCNCHLAW-FAEWLRKKSLNGGAARCGAP 166 (192)
T ss_dssp CCCCEECSSSSTTCTTCCEEECCSSCCCEECTTSSTTCTTCCEEECTTCCBCCSGGGHH-HHHHHHHHCCSGGGCBBCSS
T ss_pred CcCCccCHHHhcCCCCCCEEECCCCcCCeeCHHHhhcCCCCCEEEeCCCCccCcCcchH-HHHHHHHcCCCCCCCCCCCC
Confidence 88888888888888888888888888888888888888888888888888886654211 11123334556666666666
Q ss_pred CCCCCCCcccccccCCccccCCCC
Q 002021 585 RGGSFGNFSAQSFEGNELLCGSPN 608 (979)
Q Consensus 585 ~~~~~~~~~~~~~~~N~~~c~~p~ 608 (979)
. .+.......+..+...|..+.
T Consensus 167 ~--~l~~~~l~~l~~~~~~C~~~~ 188 (192)
T 1w8a_A 167 S--KVRDVQIKDLPHSEFKCSSEN 188 (192)
T ss_dssp T--TTTTSBGGGSCTTTCCCCCC-
T ss_pred h--HHcCCChhhCcHhhcCcCCCC
Confidence 4 455566667777877887653
No 375
>4ezg_A Putative uncharacterized protein; internalin-A, leucine-rich repeat protein, structural genomi center for structural genomics, JCSG; HET: MSE; 1.50A {Listeria monocytogenes}
Probab=99.74 E-value=3.5e-18 Score=173.71 Aligned_cols=65 Identities=17% Similarity=0.223 Sum_probs=29.2
Q ss_pred ccCCCCccceeecccccccccccccccCCCCCCceecCCCeeeecCCccccccCccceeeccCCC
Q 002021 171 EFGNLPELELMSLAANNLQGKIPLKIGNLRNLEKLDIGDNKLVGIAPIAIFNVSTLKILGLQDNS 235 (979)
Q Consensus 171 ~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~ 235 (979)
.+..+++|++|++++|.+++..|..++.+++|++|+|++|++++..|..+.++++|+.|++++|+
T Consensus 83 ~l~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~Ls~n~i~~~~~~~l~~l~~L~~L~L~~n~ 147 (197)
T 4ezg_A 83 PISGLSNLERLRIMGKDVTSDKIPNLSGLTSLTLLDISHSAHDDSILTKINTLPKVNSIDLSYNG 147 (197)
T ss_dssp GGTTCTTCCEEEEECTTCBGGGSCCCTTCTTCCEEECCSSBCBGGGHHHHTTCSSCCEEECCSCT
T ss_pred hhhcCCCCCEEEeECCccCcccChhhcCCCCCCEEEecCCccCcHhHHHHhhCCCCCEEEccCCC
Confidence 34444444444444444444444444444444444444444444434444444444444444443
No 376
>1zth_A RIO1 serine protein kinase; ribosome biogenesis, rRNA, ADP, manganese, transferase; HET: ADP; 1.89A {Archaeoglobus fulgidus} PDB: 1zp9_A* 1ztf_A*
Probab=99.73 E-value=2.7e-18 Score=182.35 Aligned_cols=137 Identities=20% Similarity=0.242 Sum_probs=105.0
Q ss_pred CCCCceeeeecceEEEEEEc-CCCcE--EEEEEecccccc------------------------chhcHHHHHHHHHhcC
Q 002021 684 FSENNLIGRGGFGSVYKASL-GDGME--VAVKVFTSQCGR------------------------AFKSFDVECEIMKSIR 736 (979)
Q Consensus 684 ~~~~~~lG~G~~g~Vy~~~~-~~~~~--vAvK~~~~~~~~------------------------~~~~~~~E~~~l~~l~ 736 (979)
|+..+.||+|+||.||+|.. .+|+. ||||+++..... ....+.+|++++++++
T Consensus 49 ~~i~~~ig~G~~g~Vy~a~~~~~g~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~ 128 (258)
T 1zth_A 49 TAMGGVISTGKEANVFYADGVFDGKPVAMAVKIYRIETSEFDKMDEYLYGDERFDMRRISPKEKVFIWTEKEFRNLERAK 128 (258)
T ss_dssp EEEEEEEEECSSEEEEEEEEEETTEEEEEEEEEECCC-------GGGTTTCTTSCC----CHHHHHHHHHHHHHHHHHHH
T ss_pred hhhCCEEeecceEEEEEEEEcCCCcEeeEEEEEEECCccchhhHHHhhcccchhhhhccChHHHHHHHHHHHHHHHHHHH
Confidence 56778999999999999976 68889 999987543111 0125788999999998
Q ss_pred CCCe--eeEEEeeccCCeeEEEEEecCC-C----ccceeeccCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCC
Q 002021 737 HRNL--IKVISSCSNEEFKALVLEYMPH-G----SLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLK 809 (979)
Q Consensus 737 h~ni--v~l~~~~~~~~~~~lv~E~~~~-g----~L~~~l~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~i~H~Dik 809 (979)
|+++ ..++++ +..++||||+.+ | +|.++... .++..+..++.|++.|++|||. +++|+|||||
T Consensus 129 ~~~i~~p~~~~~----~~~~lVmE~~g~~g~~~~~L~~~~~~----~~~~~~~~i~~qi~~~l~~lH~--~~givHrDlk 198 (258)
T 1zth_A 129 EAGVSVPQPYTY----MKNVLLMEFIGEDELPAPTLVELGRE----LKELDVEGIFNDVVENVKRLYQ--EAELVHADLS 198 (258)
T ss_dssp HTTCCCCCEEEE----ETTEEEEECCEETTEECCBHHHHGGG----GGGSCHHHHHHHHHHHHHHHHH--TSCEECSSCS
T ss_pred hCCCCCCeEEEc----CCCEEEEEecCCCCCccccHHHHhhc----cChHHHHHHHHHHHHHHHHHHH--HCCEEeCCCC
Confidence 8754 334432 356899999942 4 44443322 2345678899999999999995 5799999999
Q ss_pred CCCEEeCCCCcEEEEeecccccc
Q 002021 810 PSNVLLDDNMVAHLSDFSIAKML 832 (979)
Q Consensus 810 ~~NIll~~~~~~kl~Dfg~~~~~ 832 (979)
|+|||+++ .++|+|||+|...
T Consensus 199 p~NILl~~--~~~liDFG~a~~~ 219 (258)
T 1zth_A 199 EYNIMYID--KVYFIDMGQAVTL 219 (258)
T ss_dssp TTSEEESS--SEEECCCTTCEET
T ss_pred HHHEEEcC--cEEEEECcccccC
Confidence 99999998 9999999999764
No 377
>2wfh_A SLIT homolog 2 protein C-product; developmental protein, neurogenesis, splicing, glycoprotein, leucine-rich repeat, disulfide bond, differentiation; 1.80A {Homo sapiens}
Probab=99.71 E-value=6.9e-18 Score=170.58 Aligned_cols=131 Identities=31% Similarity=0.417 Sum_probs=102.5
Q ss_pred ceEecCCCccccccccccCcCCCcEEEeccccccCCCccccccccccceEeccCCccCcccchhhcCCcccceeecCCcc
Q 002021 451 RIVSLGSNELTSIPLTFWNLKDILNLNFSSNFLTGSLPLEIGSLKVLVGIDLSRNNFSGVIPTEIGGLKNLEYLFLGYNR 530 (979)
Q Consensus 451 ~~L~L~~N~l~~lp~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~ 530 (979)
+.+++++|+++++|..+. ++|+.|++++|+|+ .+|..|..+++|+.|+|++|+|++..+..|.++++|++|+|++|+
T Consensus 13 ~~l~~~~~~l~~ip~~~~--~~l~~L~L~~n~i~-~ip~~~~~l~~L~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N~ 89 (193)
T 2wfh_A 13 TVVRCSNKGLKVLPKGIP--RDVTELYLDGNQFT-LVPKELSNYKHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSYNR 89 (193)
T ss_dssp TEEECTTSCCSSCCSCCC--TTCCEEECCSSCCC-SCCGGGGGCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSC
T ss_pred CEEEcCCCCCCcCCCCCC--CCCCEEECCCCcCc-hhHHHhhcccCCCEEECCCCcCCEeCHhHccCCCCCCEEECCCCc
Confidence 456666666666665543 46777777777776 466777778888888888888887777888888888888888888
Q ss_pred ccCCCCCcccccccccccccccccccccCCccccCccccCeEeccCCcccccCC
Q 002021 531 LQGSIPNSFGDLISLKFLNLSNNNLSGVIPASLEKLSYLEDLNLSFNQLEGKIP 584 (979)
Q Consensus 531 l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p 584 (979)
|++..|..|.++++|++|+|++|+|++..+..|..+++|+.|+|++|+|.|...
T Consensus 90 l~~i~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~~~C~c~ 143 (193)
T 2wfh_A 90 LRCIPPRTFDGLKSLRLLSLHGNDISVVPEGAFNDLSALSHLAIGANPLYCDCN 143 (193)
T ss_dssp CCBCCTTTTTTCTTCCEEECCSSCCCBCCTTTTTTCTTCCEEECCSSCEECSGG
T ss_pred cCEeCHHHhCCCCCCCEEECCCCCCCeeChhhhhcCccccEEEeCCCCeecCCc
Confidence 887777788888888888888888887766678888889999999998887654
No 378
>3sb4_A Hypothetical leucine rich repeat protein; LRR, right-handed beta-alpha superhelix, leucine-rich repeat structural genomics; HET: MSE PG4; 1.99A {Bacteroides thetaiotaomicron}
Probab=99.70 E-value=1.7e-17 Score=183.30 Aligned_cols=100 Identities=15% Similarity=0.092 Sum_probs=44.6
Q ss_pred CCCCceEecCCCcccccCCccccCCCcCceEecCCCccccccc-cccCcCCCc-EEEeccccccCCCccccccccccceE
Q 002021 423 LAELYRLDLDGNKLSGSIPACFSNLTSLRIVSLGSNELTSIPL-TFWNLKDIL-NLNFSSNFLTGSLPLEIGSLKVLVGI 500 (979)
Q Consensus 423 l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~lp~-~~~~l~~L~-~L~ls~N~l~~~~p~~~~~l~~L~~L 500 (979)
+++|+.|+|++|+++...+.+|.++++|+.|+|.+| ++.|+. .|.++.+|+ .+++.+ .++.+.+..|.++.+|+.|
T Consensus 225 ~~~L~~l~L~~n~i~~I~~~aF~~~~~L~~l~l~~n-i~~I~~~aF~~~~~L~~~l~l~~-~l~~I~~~aF~~c~~L~~l 302 (329)
T 3sb4_A 225 MPNLVSLDISKTNATTIPDFTFAQKKYLLKIKLPHN-LKTIGQRVFSNCGRLAGTLELPA-SVTAIEFGAFMGCDNLRYV 302 (329)
T ss_dssp CTTCCEEECTTBCCCEECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTTCCEEEEECT-TCCEECTTTTTTCTTEEEE
T ss_pred cCCCeEEECCCCCcceecHhhhhCCCCCCEEECCcc-cceehHHHhhCChhccEEEEEcc-cceEEchhhhhCCccCCEE
Confidence 445555555555555444455555555555555554 444433 233344444 444433 3332333334444444444
Q ss_pred eccCCccCcccchhhcCCccccee
Q 002021 501 DLSRNNFSGVIPTEIGGLKNLEYL 524 (979)
Q Consensus 501 ~Ls~N~l~~~~p~~~~~l~~L~~L 524 (979)
++++|+++.+.+.+|.++++|+.+
T Consensus 303 ~l~~n~i~~I~~~aF~~~~~L~~l 326 (329)
T 3sb4_A 303 LATGDKITTLGDELFGNGVPSKLI 326 (329)
T ss_dssp EECSSCCCEECTTTTCTTCCCCEE
T ss_pred EeCCCccCccchhhhcCCcchhhh
Confidence 444444443333344444444433
No 379
>3sb4_A Hypothetical leucine rich repeat protein; LRR, right-handed beta-alpha superhelix, leucine-rich repeat structural genomics; HET: MSE PG4; 1.99A {Bacteroides thetaiotaomicron}
Probab=99.70 E-value=7.2e-18 Score=186.37 Aligned_cols=102 Identities=15% Similarity=-0.025 Sum_probs=59.9
Q ss_pred CCCccEEEccCCCCcccCCccccccccccccEEEccCccccCCCCccccCCCccc-EEEecCCCCCchhHHhhhcCCCCc
Q 002021 325 CKFLKYFDLSYNPLYRILPRTTVGNLSHSLEEFKMSNCNISGGIPEEISNLTNLR-TIYLGGNKLNGSILITLSKLQKLQ 403 (979)
Q Consensus 325 l~~L~~L~Ls~N~l~~~~~~~~~~~l~~~L~~L~L~~n~i~~~~p~~l~~l~~L~-~L~L~~N~l~~~~~~~l~~l~~L~ 403 (979)
|++|++++|++|++..+.+..|.+ ..+|+++++.+| ++.+.+.+|.++++|+ .+++.+ .++.+.+.+|.++++|+
T Consensus 225 ~~~L~~l~L~~n~i~~I~~~aF~~--~~~L~~l~l~~n-i~~I~~~aF~~~~~L~~~l~l~~-~l~~I~~~aF~~c~~L~ 300 (329)
T 3sb4_A 225 MPNLVSLDISKTNATTIPDFTFAQ--KKYLLKIKLPHN-LKTIGQRVFSNCGRLAGTLELPA-SVTAIEFGAFMGCDNLR 300 (329)
T ss_dssp CTTCCEEECTTBCCCEECTTTTTT--CTTCCEEECCTT-CCEECTTTTTTCTTCCEEEEECT-TCCEECTTTTTTCTTEE
T ss_pred cCCCeEEECCCCCcceecHhhhhC--CCCCCEEECCcc-cceehHHHhhCChhccEEEEEcc-cceEEchhhhhCCccCC
Confidence 344444444444444443333322 124455555444 4444555666677776 777766 66666667777777777
Q ss_pred EEEecCcccCCCccccccCCCCCceEe
Q 002021 404 DLGLKDNKLEGSIPYDICNLAELYRLD 430 (979)
Q Consensus 404 ~L~L~~N~l~~~~p~~~~~l~~L~~L~ 430 (979)
.+++++|+++...+..|.++++|+.++
T Consensus 301 ~l~l~~n~i~~I~~~aF~~~~~L~~ly 327 (329)
T 3sb4_A 301 YVLATGDKITTLGDELFGNGVPSKLIY 327 (329)
T ss_dssp EEEECSSCCCEECTTTTCTTCCCCEEE
T ss_pred EEEeCCCccCccchhhhcCCcchhhhc
Confidence 777777777666666677777777665
No 380
>2o6r_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 2.30A {Eptatretus burgeri}
Probab=99.67 E-value=1.5e-16 Score=158.71 Aligned_cols=134 Identities=27% Similarity=0.297 Sum_probs=112.4
Q ss_pred CceEecCCCccccccccccCcCCCcEEEeccccccCCCccccccccccceEeccCCccCcccchhhcCCcccceeecCCc
Q 002021 450 LRIVSLGSNELTSIPLTFWNLKDILNLNFSSNFLTGSLPLEIGSLKVLVGIDLSRNNFSGVIPTEIGGLKNLEYLFLGYN 529 (979)
Q Consensus 450 L~~L~L~~N~l~~lp~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N 529 (979)
.+.+++++|+++.+|..+. ++|+.|++++|++++..+..|+.+++|+.|+|++|++++..+..|..+++|++|+|++|
T Consensus 9 ~~~l~~~~~~l~~~p~~~~--~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N 86 (177)
T 2o6r_A 9 GTEIRCNSKGLTSVPTGIP--SSATRLELESNKLQSLPHGVFDKLTQLTKLSLSQNQIQSLPDGVFDKLTKLTILYLHEN 86 (177)
T ss_dssp TTEEECCSSCCSSCCTTCC--TTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred CCEEEecCCCCccCCCCCC--CCCcEEEeCCCcccEeCHHHhcCcccccEEECCCCcceEeChhHccCCCccCEEECCCC
Confidence 4567777777777775543 57888888888888777777888899999999999998777778889999999999999
Q ss_pred cccCCCCCcccccccccccccccccccccCCccccCccccCeEeccCCcccccCCC
Q 002021 530 RLQGSIPNSFGDLISLKFLNLSNNNLSGVIPASLEKLSYLEDLNLSFNQLEGKIPR 585 (979)
Q Consensus 530 ~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~ 585 (979)
+|++..+..|..+++|++|+|++|++++..+..+..+++|+.|+|++|+++|.+|.
T Consensus 87 ~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~~~ 142 (177)
T 2o6r_A 87 KLQSLPNGVFDKLTQLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCPR 142 (177)
T ss_dssp CCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCCHHH
T ss_pred CccccCHHHhhCCcccCEEECcCCcceEeCHHHhcCCcccCEEEecCCCeeccCcc
Confidence 99977777788999999999999999977777778899999999999999988774
No 381
>2ell_A Acidic leucine-rich nuclear phosphoprotein 32 FAM B; phapi2 protein, silver-stainable protein SSP29, acidic prote in leucines, structural genomics; NMR {Homo sapiens} PDB: 2rr6_A 2jqd_A
Probab=99.66 E-value=1.9e-16 Score=156.35 Aligned_cols=132 Identities=23% Similarity=0.241 Sum_probs=67.8
Q ss_pred CCCceEecCCCccc-ccCCccccCCCcCceEecCCCccccccccccCcCCCcEEEeccccccCCCccccccccccceEec
Q 002021 424 AELYRLDLDGNKLS-GSIPACFSNLTSLRIVSLGSNELTSIPLTFWNLKDILNLNFSSNFLTGSLPLEIGSLKVLVGIDL 502 (979)
Q Consensus 424 ~~L~~L~Ls~N~l~-~~~~~~~~~l~~L~~L~L~~N~l~~lp~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~L 502 (979)
++|++|++++|+++ +.+|..+..+++|++|++++|.++.+ ..+..+++|+.|++++|++++.+|..+..+++|+.|+|
T Consensus 24 ~~L~~L~l~~n~l~~~~i~~~~~~l~~L~~L~l~~n~l~~~-~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L 102 (168)
T 2ell_A 24 AAVRELVLDNCKSNDGKIEGLTAEFVNLEFLSLINVGLISV-SNLPKLPKLKKLELSENRIFGGLDMLAEKLPNLTHLNL 102 (168)
T ss_dssp TSCSEEECCSCBCBTTBCSSCCGGGGGCCEEEEESSCCCCC-SSCCCCSSCCEEEEESCCCCSCCCHHHHHCTTCCEEEC
T ss_pred ccCCEEECCCCCCChhhHHHHHHhCCCCCEEeCcCCCCCCh-hhhccCCCCCEEECcCCcCchHHHHHHhhCCCCCEEec
Confidence 44555555555554 44455555555555555555555544 34444555555555555555444444444555555555
Q ss_pred cCCccCcccc-hhhcCCcccceeecCCccccCCCC---Cccccccccccccccccccc
Q 002021 503 SRNNFSGVIP-TEIGGLKNLEYLFLGYNRLQGSIP---NSFGDLISLKFLNLSNNNLS 556 (979)
Q Consensus 503 s~N~l~~~~p-~~~~~l~~L~~L~Ls~N~l~~~~p---~~~~~l~~L~~L~Ls~N~l~ 556 (979)
++|++++..+ ..+..+++|+.|++++|++++..+ ..+..+++|++|++++|.+.
T Consensus 103 s~N~l~~~~~~~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~L~~L~l~~n~~~ 160 (168)
T 2ell_A 103 SGNKLKDISTLEPLKKLECLKSLDLFNCEVTNLNDYRESVFKLLPQLTYLDGYDREDQ 160 (168)
T ss_dssp BSSSCCSSGGGGGGSSCSCCCEEECCSSGGGTSTTHHHHHHTTCSSCCEETTEETTSC
T ss_pred cCCccCcchhHHHHhcCCCCCEEEeeCCcCcchHHHHHHHHHhCccCcEecCCCCChh
Confidence 5555554321 445555555555555555553322 24555555555555555554
No 382
>2ell_A Acidic leucine-rich nuclear phosphoprotein 32 FAM B; phapi2 protein, silver-stainable protein SSP29, acidic prote in leucines, structural genomics; NMR {Homo sapiens} PDB: 2rr6_A 2jqd_A
Probab=99.66 E-value=1.5e-16 Score=157.05 Aligned_cols=131 Identities=21% Similarity=0.234 Sum_probs=67.3
Q ss_pred CCCCeeeccCCccc-ccCCccccccCcccEEecccccccccCCccccCCCCCcEEEccCCccCchhhhhhhccCCcccCC
Q 002021 96 SSLQSLNLSFNRLF-GSIPSAIFTTYTLKYVCLRGNQLSGTFPSFISNKSSLQHLDLSSNALSGEIRANICREIPREFGN 174 (979)
Q Consensus 96 ~~L~~L~L~~n~~~-~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~~ip~~l~~ 174 (979)
++|++|+|++|+++ +.+|..+..+++|++|+|++|++++. ..++.+++|++|+|++|.+++. +|..++.
T Consensus 24 ~~L~~L~l~~n~l~~~~i~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~N~l~~~--------~~~~~~~ 93 (168)
T 2ell_A 24 AAVRELVLDNCKSNDGKIEGLTAEFVNLEFLSLINVGLISV--SNLPKLPKLKKLELSENRIFGG--------LDMLAEK 93 (168)
T ss_dssp TSCSEEECCSCBCBTTBCSSCCGGGGGCCEEEEESSCCCCC--SSCCCCSSCCEEEEESCCCCSC--------CCHHHHH
T ss_pred ccCCEEECCCCCCChhhHHHHHHhCCCCCEEeCcCCCCCCh--hhhccCCCCCEEECcCCcCchH--------HHHHHhh
Confidence 45556666666555 45555555555555555555555543 4455555555555555555432 3444444
Q ss_pred CCccceeecccccccccc-cccccCCCCCCceecCCCeeeecCC---ccccccCccceeeccCCCC
Q 002021 175 LPELELMSLAANNLQGKI-PLKIGNLRNLEKLDIGDNKLVGIAP---IAIFNVSTLKILGLQDNSL 236 (979)
Q Consensus 175 l~~L~~L~L~~N~l~~~~-p~~~~~l~~L~~L~Ls~N~l~~~~p---~~l~~l~~L~~L~L~~N~l 236 (979)
+++|++|+|++|.+++.. +..+..+++|++|++++|++++..+ ..+..+++|+.|++++|.+
T Consensus 94 l~~L~~L~Ls~N~l~~~~~~~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~L~~L~l~~n~~ 159 (168)
T 2ell_A 94 LPNLTHLNLSGNKLKDISTLEPLKKLECLKSLDLFNCEVTNLNDYRESVFKLLPQLTYLDGYDRED 159 (168)
T ss_dssp CTTCCEEECBSSSCCSSGGGGGGSSCSCCCEEECCSSGGGTSTTHHHHHHTTCSSCCEETTEETTS
T ss_pred CCCCCEEeccCCccCcchhHHHHhcCCCCCEEEeeCCcCcchHHHHHHHHHhCccCcEecCCCCCh
Confidence 555555555555555321 1445555555555555555554433 2344444444444444443
No 383
>2wfh_A SLIT homolog 2 protein C-product; developmental protein, neurogenesis, splicing, glycoprotein, leucine-rich repeat, disulfide bond, differentiation; 1.80A {Homo sapiens}
Probab=99.63 E-value=7.5e-16 Score=155.57 Aligned_cols=128 Identities=23% Similarity=0.299 Sum_probs=111.2
Q ss_pred ceEecCCCcccccCCccccCCCcCceEecCCCccccccccccCcCCCcEEEeccccccCCCccccccccccceEeccCCc
Q 002021 427 YRLDLDGNKLSGSIPACFSNLTSLRIVSLGSNELTSIPLTFWNLKDILNLNFSSNFLTGSLPLEIGSLKVLVGIDLSRNN 506 (979)
Q Consensus 427 ~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~lp~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~ 506 (979)
+.+++++|.++ .+|..+. ++|++|+|++|+|+.+|..+..+++|+.|+|++|+|++..+..|..+++|+.|+|++|+
T Consensus 13 ~~l~~~~~~l~-~ip~~~~--~~l~~L~L~~n~i~~ip~~~~~l~~L~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N~ 89 (193)
T 2wfh_A 13 TVVRCSNKGLK-VLPKGIP--RDVTELYLDGNQFTLVPKELSNYKHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSYNR 89 (193)
T ss_dssp TEEECTTSCCS-SCCSCCC--TTCCEEECCSSCCCSCCGGGGGCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSC
T ss_pred CEEEcCCCCCC-cCCCCCC--CCCCEEECCCCcCchhHHHhhcccCCCEEECCCCcCCEeCHhHccCCCCCCEEECCCCc
Confidence 56788888887 4555443 57888999999999888888889999999999999998888889999999999999999
Q ss_pred cCcccchhhcCCcccceeecCCccccCCCCCcccccccccccccccccccc
Q 002021 507 FSGVIPTEIGGLKNLEYLFLGYNRLQGSIPNSFGDLISLKFLNLSNNNLSG 557 (979)
Q Consensus 507 l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~ 557 (979)
|++..|..|.++++|++|+|++|+|++..+..|..+++|+.|+|++|.+..
T Consensus 90 l~~i~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~~~C 140 (193)
T 2wfh_A 90 LRCIPPRTFDGLKSLRLLSLHGNDISVVPEGAFNDLSALSHLAIGANPLYC 140 (193)
T ss_dssp CCBCCTTTTTTCTTCCEEECCSSCCCBCCTTTTTTCTTCCEEECCSSCEEC
T ss_pred cCEeCHHHhCCCCCCCEEECCCCCCCeeChhhhhcCccccEEEeCCCCeec
Confidence 998888899999999999999999997667789999999999999999974
No 384
>2je0_A Acidic leucine-rich nuclear phosphoprotein 32 FAM member A; nuclear protein; 2.40A {Homo sapiens} PDB: 2je1_A
Probab=99.63 E-value=1.9e-16 Score=153.00 Aligned_cols=126 Identities=20% Similarity=0.243 Sum_probs=57.7
Q ss_pred CCCCeeeccCCccc-ccCCccccccCcccEEecccccccccCCccccCCCCCcEEEccCCccCchhhhhhhccCCcccCC
Q 002021 96 SSLQSLNLSFNRLF-GSIPSAIFTTYTLKYVCLRGNQLSGTFPSFISNKSSLQHLDLSSNALSGEIRANICREIPREFGN 174 (979)
Q Consensus 96 ~~L~~L~L~~n~~~-~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~~ip~~l~~ 174 (979)
++|++|++++|+++ +.+|..+..+++|++|+|++|++++. ..++.+++|++|+|++|.+++. +|..++.
T Consensus 17 ~~l~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~n~i~~~--------~~~~~~~ 86 (149)
T 2je0_A 17 SDVKELVLDNSRSNEGKLEGLTDEFEELEFLSTINVGLTSI--ANLPKLNKLKKLELSDNRVSGG--------LEVLAEK 86 (149)
T ss_dssp GGCSEEECTTCBCBTTBCCSCCTTCTTCCEEECTTSCCCCC--TTCCCCTTCCEEECCSSCCCSC--------THHHHHH
T ss_pred ccCeEEEccCCcCChhHHHHHHhhcCCCcEEECcCCCCCCc--hhhhcCCCCCEEECCCCcccch--------HHHHhhh
Confidence 44445555555544 44444444444444444444444433 3444444555555555544432 2333334
Q ss_pred CCccceeeccccccccc-ccccccCCCCCCceecCCCeeeecCC---ccccccCccceeec
Q 002021 175 LPELELMSLAANNLQGK-IPLKIGNLRNLEKLDIGDNKLVGIAP---IAIFNVSTLKILGL 231 (979)
Q Consensus 175 l~~L~~L~L~~N~l~~~-~p~~~~~l~~L~~L~Ls~N~l~~~~p---~~l~~l~~L~~L~L 231 (979)
+++|++|++++|.+++. .+..++.+++|++|++++|++++..+ ..+..+++|+.|++
T Consensus 87 l~~L~~L~ls~N~i~~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~L~~L~l 147 (149)
T 2je0_A 87 CPNLTHLNLSGNKIKDLSTIEPLKKLENLKSLDLFNCEVTNLNDYRENVFKLLPQLTYLDG 147 (149)
T ss_dssp CTTCCEEECTTSCCCSHHHHGGGGGCTTCCEEECTTCGGGGSTTHHHHHHHHCTTCCEETT
T ss_pred CCCCCEEECCCCcCCChHHHHHHhhCCCCCEEeCcCCcccchHHHHHHHHHHCCCcccccC
Confidence 44444444444444432 22444455555555555555544433 23444444444443
No 385
>2o6r_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 2.30A {Eptatretus burgeri}
Probab=99.63 E-value=1.1e-15 Score=152.33 Aligned_cols=134 Identities=23% Similarity=0.251 Sum_probs=97.0
Q ss_pred CccceeEeeCCCCcEEEEEecCCCccccCCCCCcCCCCCCeeeccCCcccccCCccccccCcccEEecccccccccCCcc
Q 002021 60 CNWTGVACEVHSQRVTVLNISSLNLTGTIPSQLGNLSSLQSLNLSFNRLFGSIPSAIFTTYTLKYVCLRGNQLSGTFPSF 139 (979)
Q Consensus 60 c~w~gv~c~~~~~~v~~l~l~~~~l~g~~~~~l~~l~~L~~L~L~~n~~~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~ 139 (979)
|+|.+|.|.. ++++ .+|..+ .++|++|++++|++++..|..+..+++|++|+|++|++++..+..
T Consensus 7 C~~~~l~~~~------------~~l~-~~p~~~--~~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~ 71 (177)
T 2o6r_A 7 CSGTEIRCNS------------KGLT-SVPTGI--PSSATRLELESNKLQSLPHGVFDKLTQLTKLSLSQNQIQSLPDGV 71 (177)
T ss_dssp EETTEEECCS------------SCCS-SCCTTC--CTTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTT
T ss_pred eCCCEEEecC------------CCCc-cCCCCC--CCCCcEEEeCCCcccEeCHHHhcCcccccEEECCCCcceEeChhH
Confidence 7888888853 3454 345433 368889999998888666666778888888888888888766666
Q ss_pred ccCCCCCcEEEccCCccCchhhhhhhccCCcccCCCCccceeecccccccccccccccCCCCCCceecCCCeeeecC
Q 002021 140 ISNKSSLQHLDLSSNALSGEIRANICREIPREFGNLPELELMSLAANNLQGKIPLKIGNLRNLEKLDIGDNKLVGIA 216 (979)
Q Consensus 140 l~~l~~L~~L~Ls~N~l~~~~~~~~~~~ip~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~ 216 (979)
++++++|++|+|++|.+++. .+..++.+++|++|+|++|++++..+..+..+++|++|+|++|.+.+..
T Consensus 72 ~~~l~~L~~L~l~~N~l~~~--------~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~ 140 (177)
T 2o6r_A 72 FDKLTKLTILYLHENKLQSL--------PNGVFDKLTQLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSC 140 (177)
T ss_dssp TTTCTTCCEEECCSSCCCCC--------CTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCCH
T ss_pred ccCCCccCEEECCCCCcccc--------CHHHhhCCcccCEEECcCCcceEeCHHHhcCCcccCEEEecCCCeeccC
Confidence 78888888888888887743 3344677777777777777777655555677777777777777776543
No 386
>2je0_A Acidic leucine-rich nuclear phosphoprotein 32 FAM member A; nuclear protein; 2.40A {Homo sapiens} PDB: 2je1_A
Probab=99.62 E-value=4.1e-16 Score=150.56 Aligned_cols=127 Identities=24% Similarity=0.259 Sum_probs=59.1
Q ss_pred CCCceEecCCCccc-ccCCccccCCCcCceEecCCCccccccccccCcCCCcEEEeccccccCCCccccccccccceEec
Q 002021 424 AELYRLDLDGNKLS-GSIPACFSNLTSLRIVSLGSNELTSIPLTFWNLKDILNLNFSSNFLTGSLPLEIGSLKVLVGIDL 502 (979)
Q Consensus 424 ~~L~~L~Ls~N~l~-~~~~~~~~~l~~L~~L~L~~N~l~~lp~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~L 502 (979)
++|+.|++++|.++ +.+|..+..+++|++|++++|+++.+ ..+..+++|+.|++++|.+++.+|..++.+++|+.|++
T Consensus 17 ~~l~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~-~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~l 95 (149)
T 2je0_A 17 SDVKELVLDNSRSNEGKLEGLTDEFEELEFLSTINVGLTSI-ANLPKLNKLKKLELSDNRVSGGLEVLAEKCPNLTHLNL 95 (149)
T ss_dssp GGCSEEECTTCBCBTTBCCSCCTTCTTCCEEECTTSCCCCC-TTCCCCTTCCEEECCSSCCCSCTHHHHHHCTTCCEEEC
T ss_pred ccCeEEEccCCcCChhHHHHHHhhcCCCcEEECcCCCCCCc-hhhhcCCCCCEEECCCCcccchHHHHhhhCCCCCEEEC
Confidence 44555555555555 44555555555555555555555544 33444444444444444444434444444444444444
Q ss_pred cCCccCcc-cchhhcCCcccceeecCCccccCCCC---Ccccccccccccccc
Q 002021 503 SRNNFSGV-IPTEIGGLKNLEYLFLGYNRLQGSIP---NSFGDLISLKFLNLS 551 (979)
Q Consensus 503 s~N~l~~~-~p~~~~~l~~L~~L~Ls~N~l~~~~p---~~~~~l~~L~~L~Ls 551 (979)
++|++++. .+..+..+++|++|++++|++++..+ ..+..+++|+.||++
T Consensus 96 s~N~i~~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~L~~L~l~ 148 (149)
T 2je0_A 96 SGNKIKDLSTIEPLKKLENLKSLDLFNCEVTNLNDYRENVFKLLPQLTYLDGY 148 (149)
T ss_dssp TTSCCCSHHHHGGGGGCTTCCEEECTTCGGGGSTTHHHHHHHHCTTCCEETTB
T ss_pred CCCcCCChHHHHHHhhCCCCCEEeCcCCcccchHHHHHHHHHHCCCcccccCC
Confidence 44444432 22444444444444444444443222 234444444444443
No 387
>4fdw_A Leucine rich hypothetical protein; putative cell surface protein, BIG3 domain, LRR domain, STRU genomics; 2.05A {Bacteroides ovatus} PDB: 4fd0_A
Probab=99.62 E-value=6e-15 Score=166.35 Aligned_cols=245 Identities=13% Similarity=0.141 Sum_probs=170.0
Q ss_pred ccCCCCccEEEccCCCCcccCCccccccccccccEEEccCccccCCCCccccCCCcccEEEecCCCCCchhHHhhhcCCC
Q 002021 322 LSNCKFLKYFDLSYNPLYRILPRTTVGNLSHSLEEFKMSNCNISGGIPEEISNLTNLRTIYLGGNKLNGSILITLSKLQK 401 (979)
Q Consensus 322 l~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~~L~~L~L~~n~i~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~l~~l~~ 401 (979)
|.++ +|+.+++..| +..+....|.. .+|+.+.+.+ .++.+.+..|.++++|+.+++.+|+++.+....|. ..+
T Consensus 132 F~~~-~L~~i~l~~~-i~~I~~~aF~~---~~L~~i~lp~-~l~~I~~~aF~~c~~L~~l~l~~n~l~~I~~~aF~-~~~ 204 (401)
T 4fdw_A 132 FRNS-QIAKVVLNEG-LKSIGDMAFFN---STVQEIVFPS-TLEQLKEDIFYYCYNLKKADLSKTKITKLPASTFV-YAG 204 (401)
T ss_dssp TTTC-CCSEEECCTT-CCEECTTTTTT---CCCCEEECCT-TCCEECSSTTTTCTTCCEEECTTSCCSEECTTTTT-TCC
T ss_pred cccC-CccEEEeCCC-ccEECHHhcCC---CCceEEEeCC-CccEehHHHhhCcccCCeeecCCCcceEechhhEe-ecc
Confidence 4443 4566665544 55554444443 2466676664 55556667788888888888888888877777776 478
Q ss_pred CcEEEecCcccCCCccccccCCCCCceEecCCCcccccCCccccCCCcCceEecCCCccccccc-cccCcCCCcEEEecc
Q 002021 402 LQDLGLKDNKLEGSIPYDICNLAELYRLDLDGNKLSGSIPACFSNLTSLRIVSLGSNELTSIPL-TFWNLKDILNLNFSS 480 (979)
Q Consensus 402 L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~lp~-~~~~l~~L~~L~ls~ 480 (979)
|+.+.+..+ +.......|.++++|+.+++..| ++.....+|.+ .+|+.+.+ .|.++.++. .|.++++|+.+.+.+
T Consensus 205 L~~l~lp~~-l~~I~~~aF~~~~~L~~l~l~~~-l~~I~~~aF~~-~~L~~i~l-p~~i~~I~~~aF~~c~~L~~l~l~~ 280 (401)
T 4fdw_A 205 IEEVLLPVT-LKEIGSQAFLKTSQLKTIEIPEN-VSTIGQEAFRE-SGITTVKL-PNGVTNIASRAFYYCPELAEVTTYG 280 (401)
T ss_dssp CSEEECCTT-CCEECTTTTTTCTTCCCEECCTT-CCEECTTTTTT-CCCSEEEE-ETTCCEECTTTTTTCTTCCEEEEES
T ss_pred cCEEEeCCc-hheehhhHhhCCCCCCEEecCCC-ccCcccccccc-CCccEEEe-CCCccEEChhHhhCCCCCCEEEeCC
Confidence 888888744 66566677788888888888765 55566667777 67888888 455777754 577788888888877
Q ss_pred cccc-----CCCccccccccccceEeccCCccCcccchhhcCCcccceeecCCccccCCCCCcccccccccccccccccc
Q 002021 481 NFLT-----GSLPLEIGSLKVLVGIDLSRNNFSGVIPTEIGGLKNLEYLFLGYNRLQGSIPNSFGDLISLKFLNLSNNNL 555 (979)
Q Consensus 481 N~l~-----~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l 555 (979)
|.+. ...+..|.++.+|+.++|. |.++.+...+|.++++|+.+.|..| ++...+.+|.++ +|+.+++++|.+
T Consensus 281 ~~~~~~~~~~I~~~aF~~c~~L~~l~l~-~~i~~I~~~aF~~c~~L~~l~lp~~-l~~I~~~aF~~~-~L~~l~l~~n~~ 357 (401)
T 4fdw_A 281 STFNDDPEAMIHPYCLEGCPKLARFEIP-ESIRILGQGLLGGNRKVTQLTIPAN-VTQINFSAFNNT-GIKEVKVEGTTP 357 (401)
T ss_dssp SCCCCCTTCEECTTTTTTCTTCCEECCC-TTCCEECTTTTTTCCSCCEEEECTT-CCEECTTSSSSS-CCCEEEECCSSC
T ss_pred ccccCCcccEECHHHhhCCccCCeEEeC-CceEEEhhhhhcCCCCccEEEECcc-ccEEcHHhCCCC-CCCEEEEcCCCC
Confidence 7664 3455677777788888887 4466666677777788888888554 665556777777 788888888877
Q ss_pred cccCCccccCcc-ccCeEeccCCccc
Q 002021 556 SGVIPASLEKLS-YLEDLNLSFNQLE 580 (979)
Q Consensus 556 ~~~~p~~~~~l~-~L~~L~L~~N~l~ 580 (979)
....+..|..++ .+..|++..|.+.
T Consensus 358 ~~l~~~~F~~~~~~l~~l~vp~~~~~ 383 (401)
T 4fdw_A 358 PQVFEKVWYGFPDDITVIRVPAESVE 383 (401)
T ss_dssp CBCCCSSCCCSCTTCCEEEECGGGHH
T ss_pred cccccccccCCCCCccEEEeCHHHHH
Confidence 766666777764 5677777666543
No 388
>4gyi_A RIO2 kinase; protein kinase, ADP complex, phosphoaspartate, acyl-phosphat ribosome biogenesis, Ser/Thr protein kinase; HET: PHD ADP; 2.20A {Chaetomium thermophilum} PDB: 4gyg_A
Probab=99.61 E-value=3e-16 Score=172.26 Aligned_cols=137 Identities=15% Similarity=0.165 Sum_probs=100.5
Q ss_pred CCCCCCceeeeecceEEEEEEcCCCcEEEEEEecccccc--------------chhc--------HHHHHHHHHhcCCCC
Q 002021 682 DGFSENNLIGRGGFGSVYKASLGDGMEVAVKVFTSQCGR--------------AFKS--------FDVECEIMKSIRHRN 739 (979)
Q Consensus 682 ~~~~~~~~lG~G~~g~Vy~~~~~~~~~vAvK~~~~~~~~--------------~~~~--------~~~E~~~l~~l~h~n 739 (979)
.-|++.+.||+|+||.||+|...+|+.||||+++..... .... ..+|...|.++.+.+
T Consensus 95 ~iY~I~~~IG~Gk~a~VY~a~d~~G~~vAvKi~r~~~~sfr~v~~~r~~~~~~~~~~~~~~~rl~A~kE~~nL~rL~~~g 174 (397)
T 4gyi_A 95 DVYSVGSRIGVGKESDIMIVADEKGKQKVLKIHRLGRISFRTVKANRDYLRNRSTGSWMYLSRLAAIKEFAFMKALYEEG 174 (397)
T ss_dssp SCSEEEEEEEECSSEEEEEEECTTCCEEEEEEECTTEECCCCCC--CEECTTSCHHHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred CEEEecCEeeeCCceEEEEEECCCCCEEEEEEEecccccHHHHHHHHHHHHhhccccHHHHHHHHHHHHHHHHHHHHhcC
Confidence 348889999999999999998889999999987532100 0001 134566666664433
Q ss_pred ee--eEEEeeccCCeeEEEEEecCCCccceeeccCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCEEeCC
Q 002021 740 LI--KVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDD 817 (979)
Q Consensus 740 iv--~l~~~~~~~~~~~lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~i~H~Dik~~NIll~~ 817 (979)
+. ..++. ...++||||++|++|.++... +....++.|++.++.||| .+|||||||||.|||+++
T Consensus 175 v~vp~p~~~----~~~~LVME~i~G~~L~~l~~~-------~~~~~l~~qll~~l~~lH---~~gIVHrDLKp~NILl~~ 240 (397)
T 4gyi_A 175 FPVPEPIAQ----SRHTIVMSLVDALPMRQVSSV-------PDPASLYADLIALILRLA---KHGLIHGDFNEFNILIRE 240 (397)
T ss_dssp CSCCCEEEE----ETTEEEEECCSCEEGGGCCCC-------SCHHHHHHHHHHHHHHHH---HTTEECSCCSTTSEEEEE
T ss_pred CCCCeeeec----cCceEEEEecCCccHhhhccc-------HHHHHHHHHHHHHHHHHH---HCCCcCCCCCHHHEEEeC
Confidence 32 22222 123799999999888766432 234568899999999999 899999999999999987
Q ss_pred CC----------cEEEEeecccccc
Q 002021 818 NM----------VAHLSDFSIAKML 832 (979)
Q Consensus 818 ~~----------~~kl~Dfg~~~~~ 832 (979)
++ .+.|+||+-+...
T Consensus 241 dgd~~d~~~~~~~~~iID~~Q~V~~ 265 (397)
T 4gyi_A 241 EKDAEDPSSITLTPIIIXFPQMVSM 265 (397)
T ss_dssp EECSSCTTSEEEEEEECCCTTCEET
T ss_pred CCCcccccccccceEEEEeCCcccC
Confidence 76 3899999987654
No 389
>4fdw_A Leucine rich hypothetical protein; putative cell surface protein, BIG3 domain, LRR domain, STRU genomics; 2.05A {Bacteroides ovatus} PDB: 4fd0_A
Probab=99.59 E-value=1.5e-14 Score=163.22 Aligned_cols=242 Identities=12% Similarity=0.142 Sum_probs=128.7
Q ss_pred CCcEEeccccccccccCccccccccccceeccccccccccchhhhhhcccCCCCccEEEccCCCCcccCCcccccccccc
Q 002021 274 KLSILDLEGNSFSGFIPNTFGNLRNLSWLVLSDNYLTSSTQELSFLSSLSNCKFLKYFDLSYNPLYRILPRTTVGNLSHS 353 (979)
Q Consensus 274 ~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~~ 353 (979)
+|+.+++..| ++.+...+|.+. +|+.+.+.+ .++.++.. +|.+|++|+.++++.|.+..+....|. ..+
T Consensus 136 ~L~~i~l~~~-i~~I~~~aF~~~-~L~~i~lp~-~l~~I~~~-----aF~~c~~L~~l~l~~n~l~~I~~~aF~---~~~ 204 (401)
T 4fdw_A 136 QIAKVVLNEG-LKSIGDMAFFNS-TVQEIVFPS-TLEQLKED-----IFYYCYNLKKADLSKTKITKLPASTFV---YAG 204 (401)
T ss_dssp CCSEEECCTT-CCEECTTTTTTC-CCCEEECCT-TCCEECSS-----TTTTCTTCCEEECTTSCCSEECTTTTT---TCC
T ss_pred CccEEEeCCC-ccEECHHhcCCC-CceEEEeCC-CccEehHH-----HhhCcccCCeeecCCCcceEechhhEe---ecc
Confidence 4555555444 444444555552 455555553 44444332 355566666666666655555444443 135
Q ss_pred ccEEEccCccccCCCCccccCCCcccEEEecCCCCCchhHHhhhcCCCCcEEEecCcccCCCccccccCCCCCceEecCC
Q 002021 354 LEEFKMSNCNISGGIPEEISNLTNLRTIYLGGNKLNGSILITLSKLQKLQDLGLKDNKLEGSIPYDICNLAELYRLDLDG 433 (979)
Q Consensus 354 L~~L~L~~n~i~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~ 433 (979)
|+.+.+.++ ++.+...+|.++++|+.+++..| ++.+...+|.+ .+|+.+.+ .+.++......|.++++|+.+++.+
T Consensus 205 L~~l~lp~~-l~~I~~~aF~~~~~L~~l~l~~~-l~~I~~~aF~~-~~L~~i~l-p~~i~~I~~~aF~~c~~L~~l~l~~ 280 (401)
T 4fdw_A 205 IEEVLLPVT-LKEIGSQAFLKTSQLKTIEIPEN-VSTIGQEAFRE-SGITTVKL-PNGVTNIASRAFYYCPELAEVTTYG 280 (401)
T ss_dssp CSEEECCTT-CCEECTTTTTTCTTCCCEECCTT-CCEECTTTTTT-CCCSEEEE-ETTCCEECTTTTTTCTTCCEEEEES
T ss_pred cCEEEeCCc-hheehhhHhhCCCCCCEEecCCC-ccCcccccccc-CCccEEEe-CCCccEEChhHhhCCCCCCEEEeCC
Confidence 566666533 55455566777777777777654 45555555655 56666666 3334444455556666666666655
Q ss_pred Cccc-----ccCCccccCCCcCceEecCCCccccccccccCcCCCcEEEeccccccCCCccccccccccceEeccCCccC
Q 002021 434 NKLS-----GSIPACFSNLTSLRIVSLGSNELTSIPLTFWNLKDILNLNFSSNFLTGSLPLEIGSLKVLVGIDLSRNNFS 508 (979)
Q Consensus 434 N~l~-----~~~~~~~~~l~~L~~L~L~~N~l~~lp~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~ 508 (979)
|.+. ...+.+|.++++|+.+.+. +.++.|+ ...|.++.+|+.++|..| ++
T Consensus 281 ~~~~~~~~~~I~~~aF~~c~~L~~l~l~-~~i~~I~-----------------------~~aF~~c~~L~~l~lp~~-l~ 335 (401)
T 4fdw_A 281 STFNDDPEAMIHPYCLEGCPKLARFEIP-ESIRILG-----------------------QGLLGGNRKVTQLTIPAN-VT 335 (401)
T ss_dssp SCCCCCTTCEECTTTTTTCTTCCEECCC-TTCCEEC-----------------------TTTTTTCCSCCEEEECTT-CC
T ss_pred ccccCCcccEECHHHhhCCccCCeEEeC-CceEEEh-----------------------hhhhcCCCCccEEEECcc-cc
Confidence 5543 2334455555555555555 2344443 344555555555555333 44
Q ss_pred cccchhhcCCcccceeecCCccccCCCCCcccccc-ccccccccccccc
Q 002021 509 GVIPTEIGGLKNLEYLFLGYNRLQGSIPNSFGDLI-SLKFLNLSNNNLS 556 (979)
Q Consensus 509 ~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~-~L~~L~Ls~N~l~ 556 (979)
.+.+.+|.++ +|+.+++++|.+....+..|.+++ +++.|.+..|.+.
T Consensus 336 ~I~~~aF~~~-~L~~l~l~~n~~~~l~~~~F~~~~~~l~~l~vp~~~~~ 383 (401)
T 4fdw_A 336 QINFSAFNNT-GIKEVKVEGTTPPQVFEKVWYGFPDDITVIRVPAESVE 383 (401)
T ss_dssp EECTTSSSSS-CCCEEEECCSSCCBCCCSSCCCSCTTCCEEEECGGGHH
T ss_pred EEcHHhCCCC-CCCEEEEcCCCCcccccccccCCCCCccEEEeCHHHHH
Confidence 4445555555 566666666655544455555553 4555665555543
No 390
>1ds9_A Outer arm dynein; leucine-rich repeat, beta-BETA-alpha cylinder, flagella, contractIle protein; NMR {Chlamydomonas reinhardtii} SCOP: c.10.3.1 PDB: 1m9l_A
Probab=99.58 E-value=4.4e-17 Score=165.72 Aligned_cols=155 Identities=23% Similarity=0.291 Sum_probs=76.5
Q ss_pred hhcCCCCcEEEecCcccCCCccc------cccCCCCCceEecCCCcccccCCccccCCCcCceEecCCCccccccccccC
Q 002021 396 LSKLQKLQDLGLKDNKLEGSIPY------DICNLAELYRLDLDGNKLSGSIPACFSNLTSLRIVSLGSNELTSIPLTFWN 469 (979)
Q Consensus 396 l~~l~~L~~L~L~~N~l~~~~p~------~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~lp~~~~~ 469 (979)
+.....++.++++.+.+.+..|. .+..+++|++|++++|++++ +| .+..+++|++|++++|+++.+|..+..
T Consensus 14 ~~~~~~l~~l~l~~~~l~~~~~~l~~l~~~~~~l~~L~~L~ls~n~l~~-l~-~~~~l~~L~~L~l~~n~l~~l~~~~~~ 91 (198)
T 1ds9_A 14 FEERKSVVATEAEKVELHGMIPPIEKMDATLSTLKACKHLALSTNNIEK-IS-SLSGMENLRILSLGRNLIKKIENLDAV 91 (198)
T ss_dssp HHHTTCCCCTTCSEEECCBCCTTCCCCHHHHHHTTTCSEEECSEEEESC-CC-CHHHHTTCCEEEEEEEEECSCSSHHHH
T ss_pred HHhcccccCcchheeEeccccCcHhhhhHHHhcCCCCCEEECCCCCCcc-cc-ccccCCCCCEEECCCCCcccccchhhc
Confidence 44455555555555555554443 45555555555555555543 33 444455555555555555544444444
Q ss_pred cCCCcEEEeccccccCCCccccccccccceEeccCCccCcccchhhcCCcccceeecCCccccCCCC-Cccccccccccc
Q 002021 470 LKDILNLNFSSNFLTGSLPLEIGSLKVLVGIDLSRNNFSGVIPTEIGGLKNLEYLFLGYNRLQGSIP-NSFGDLISLKFL 548 (979)
Q Consensus 470 l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p-~~~~~l~~L~~L 548 (979)
+++|+.|+|++|++++ +| .+..+++|++|+|++|++++..+ ..+..+++|++|
T Consensus 92 ------------------------~~~L~~L~L~~N~l~~-l~-~~~~l~~L~~L~l~~N~i~~~~~~~~l~~l~~L~~L 145 (198)
T 1ds9_A 92 ------------------------ADTLEELWISYNQIAS-LS-GIEKLVNLRVLYMSNNKITNWGEIDKLAALDKLEDL 145 (198)
T ss_dssp ------------------------HHHCSEEEEEEEECCC-HH-HHHHHHHSSEEEESEEECCCHHHHHHHTTTTTCSEE
T ss_pred ------------------------CCcCCEEECcCCcCCc-CC-ccccCCCCCEEECCCCcCCchhHHHHHhcCCCCCEE
Confidence 4444444444444443 22 34445555555555555543211 244455555555
Q ss_pred ccccccccccCCcc----------ccCccccCeEeccCCccc
Q 002021 549 NLSNNNLSGVIPAS----------LEKLSYLEDLNLSFNQLE 580 (979)
Q Consensus 549 ~Ls~N~l~~~~p~~----------~~~l~~L~~L~L~~N~l~ 580 (979)
++++|++++.+|.. +..+++|+.|+ +|+++
T Consensus 146 ~l~~N~l~~~~~~~~~~~~~~~~~~~~l~~L~~Ld--~~~i~ 185 (198)
T 1ds9_A 146 LLAGNPLYNDYKENNATSEYRIEVVKRLPNLKKLD--GMPVD 185 (198)
T ss_dssp EECSCHHHHHHHTTTTHHHHHHHHHHHCSSCSEEC--CGGGT
T ss_pred EecCCccccccccccchHHHHHHHHHhCCCcEEEC--CcccC
Confidence 55555555443332 45556666554 55554
No 391
>1ds9_A Outer arm dynein; leucine-rich repeat, beta-BETA-alpha cylinder, flagella, contractIle protein; NMR {Chlamydomonas reinhardtii} SCOP: c.10.3.1 PDB: 1m9l_A
Probab=99.58 E-value=3.2e-17 Score=166.75 Aligned_cols=144 Identities=24% Similarity=0.326 Sum_probs=116.4
Q ss_pred ccCCCCCceEecCCCcccccCCccccCCCcCceEecCCCccccccccccCcCCCcEEEeccccccCCCccccccccccce
Q 002021 420 ICNLAELYRLDLDGNKLSGSIPACFSNLTSLRIVSLGSNELTSIPLTFWNLKDILNLNFSSNFLTGSLPLEIGSLKVLVG 499 (979)
Q Consensus 420 ~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~lp~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~ 499 (979)
+.....++.++++.|.+.+..| .++.+|..+..+++|+.|++++|.+++ +| .+..+++|+.
T Consensus 14 ~~~~~~l~~l~l~~~~l~~~~~-----------------~l~~l~~~~~~l~~L~~L~ls~n~l~~-l~-~~~~l~~L~~ 74 (198)
T 1ds9_A 14 FEERKSVVATEAEKVELHGMIP-----------------PIEKMDATLSTLKACKHLALSTNNIEK-IS-SLSGMENLRI 74 (198)
T ss_dssp HHHTTCCCCTTCSEEECCBCCT-----------------TCCCCHHHHHHTTTCSEEECSEEEESC-CC-CHHHHTTCCE
T ss_pred HHhcccccCcchheeEeccccC-----------------cHhhhhHHHhcCCCCCEEECCCCCCcc-cc-ccccCCCCCE
Confidence 4455667777777777765443 344556667777778888888888876 55 7788888888
Q ss_pred EeccCCccCcccchhhcCCcccceeecCCccccCCCCCcccccccccccccccccccccCC-ccccCccccCeEeccCCc
Q 002021 500 IDLSRNNFSGVIPTEIGGLKNLEYLFLGYNRLQGSIPNSFGDLISLKFLNLSNNNLSGVIP-ASLEKLSYLEDLNLSFNQ 578 (979)
Q Consensus 500 L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p-~~~~~l~~L~~L~L~~N~ 578 (979)
|++++|+++ .+|..+..+++|++|+|++|++++ +| .+..+++|++|+|++|++++..+ ..+..+++|+.|++++|+
T Consensus 75 L~l~~n~l~-~l~~~~~~~~~L~~L~L~~N~l~~-l~-~~~~l~~L~~L~l~~N~i~~~~~~~~l~~l~~L~~L~l~~N~ 151 (198)
T 1ds9_A 75 LSLGRNLIK-KIENLDAVADTLEELWISYNQIAS-LS-GIEKLVNLRVLYMSNNKITNWGEIDKLAALDKLEDLLLAGNP 151 (198)
T ss_dssp EEEEEEEEC-SCSSHHHHHHHCSEEEEEEEECCC-HH-HHHHHHHSSEEEESEEECCCHHHHHHHTTTTTCSEEEECSCH
T ss_pred EECCCCCcc-cccchhhcCCcCCEEECcCCcCCc-CC-ccccCCCCCEEECCCCcCCchhHHHHHhcCCCCCEEEecCCc
Confidence 999999888 567888889999999999999996 55 69999999999999999996433 578999999999999999
Q ss_pred ccccCCC
Q 002021 579 LEGKIPR 585 (979)
Q Consensus 579 l~~~~p~ 585 (979)
+++.+|.
T Consensus 152 l~~~~~~ 158 (198)
T 1ds9_A 152 LYNDYKE 158 (198)
T ss_dssp HHHHHHT
T ss_pred ccccccc
Confidence 9998775
No 392
>1a9n_A U2A', U2A'; complex (nuclear protein/RNA), RNA, snRNP, ribonucleoprotein, RNA binding protein/RNA complex; 2.38A {Homo sapiens} SCOP: c.10.2.4
Probab=99.56 E-value=2.1e-15 Score=150.11 Aligned_cols=129 Identities=18% Similarity=0.161 Sum_probs=66.4
Q ss_pred CCcCceEecCCCccccccccccCc-CCCcEEEeccccccCCCccccccccccceEeccCCccCcccchhhcCCcccceee
Q 002021 447 LTSLRIVSLGSNELTSIPLTFWNL-KDILNLNFSSNFLTGSLPLEIGSLKVLVGIDLSRNNFSGVIPTEIGGLKNLEYLF 525 (979)
Q Consensus 447 l~~L~~L~L~~N~l~~lp~~~~~l-~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ 525 (979)
+++|++|++++|+++.+|. +..+ ++|+.|++++|.+++. ..++.+++|+.|+|++|+|++..+..|..+++|++|+
T Consensus 18 ~~~L~~L~l~~n~l~~i~~-~~~~~~~L~~L~Ls~N~l~~~--~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~ 94 (176)
T 1a9n_A 18 AVRDRELDLRGYKIPVIEN-LGATLDQFDAIDFSDNEIRKL--DGFPLLRRLKTLLVNNNRICRIGEGLDQALPDLTELI 94 (176)
T ss_dssp TTSCEEEECTTSCCCSCCC-GGGGTTCCSEEECCSSCCCEE--CCCCCCSSCCEEECCSSCCCEECSCHHHHCTTCCEEE
T ss_pred cCCceEEEeeCCCCchhHH-hhhcCCCCCEEECCCCCCCcc--cccccCCCCCEEECCCCcccccCcchhhcCCCCCEEE
Confidence 3344444444444444332 2222 2444444444444432 3445555555555555555544444445566666666
Q ss_pred cCCccccCCCCC--cccccccccccccccccccccCCcc----ccCccccCeEeccCCccc
Q 002021 526 LGYNRLQGSIPN--SFGDLISLKFLNLSNNNLSGVIPAS----LEKLSYLEDLNLSFNQLE 580 (979)
Q Consensus 526 Ls~N~l~~~~p~--~~~~l~~L~~L~Ls~N~l~~~~p~~----~~~l~~L~~L~L~~N~l~ 580 (979)
|++|+|+ .+|. .+..+++|+.|++++|.++ .+|.. +..+++|+.|++++|...
T Consensus 95 L~~N~i~-~~~~~~~l~~l~~L~~L~l~~N~i~-~~~~~~~~~~~~l~~L~~Ld~~~n~~~ 153 (176)
T 1a9n_A 95 LTNNSLV-ELGDLDPLASLKSLTYLCILRNPVT-NKKHYRLYVIYKVPQVRVLDFQKVKLK 153 (176)
T ss_dssp CCSCCCC-CGGGGGGGGGCTTCCEEECCSSGGG-GSTTHHHHHHHHCTTCSEETTEECCHH
T ss_pred CCCCcCC-cchhhHhhhcCCCCCEEEecCCCCC-CcHhHHHHHHHHCCccceeCCCcCCHH
Confidence 6666664 3443 5556666666666666665 33432 556666666666666554
No 393
>4fs7_A Uncharacterized protein; leucine-rich repeats, protein binding, extracellular protein structural genomics; HET: MSE; 1.19A {Bacteroides ovatus}
Probab=99.55 E-value=1.1e-13 Score=156.73 Aligned_cols=80 Identities=21% Similarity=0.210 Sum_probs=43.2
Q ss_pred cccccccccceEeccCCccCcccchhhcCCcccceeecCCccccCCCCCcccccccccccccccccccccCCccccCccc
Q 002021 489 LEIGSLKVLVGIDLSRNNFSGVIPTEIGGLKNLEYLFLGYNRLQGSIPNSFGDLISLKFLNLSNNNLSGVIPASLEKLSY 568 (979)
Q Consensus 489 ~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~ 568 (979)
..|.++.+|+.++|..+ ++.+...+|.++++|+.+++..| ++.....+|.++++|+.+++..+ ++ .+...|.++++
T Consensus 314 ~aF~~c~~L~~i~lp~~-v~~I~~~aF~~c~~L~~i~lp~~-l~~I~~~aF~~C~~L~~i~lp~~-~~-~~~~~F~~c~~ 389 (394)
T 4fs7_A 314 EAFESCTSLVSIDLPYL-VEEIGKRSFRGCTSLSNINFPLS-LRKIGANAFQGCINLKKVELPKR-LE-QYRYDFEDTTK 389 (394)
T ss_dssp TTTTTCTTCCEECCCTT-CCEECTTTTTTCTTCCEECCCTT-CCEECTTTBTTCTTCCEEEEEGG-GG-GGGGGBCTTCE
T ss_pred hhhcCCCCCCEEEeCCc-ccEEhHHhccCCCCCCEEEECcc-ccEehHHHhhCCCCCCEEEECCC-CE-EhhheecCCCC
Confidence 34455555555555432 44444555666666666666555 44344556666666666666544 22 23445666666
Q ss_pred cCeE
Q 002021 569 LEDL 572 (979)
Q Consensus 569 L~~L 572 (979)
|+.+
T Consensus 390 L~~I 393 (394)
T 4fs7_A 390 FKWI 393 (394)
T ss_dssp EEEE
T ss_pred CcEE
Confidence 6543
No 394
>1a9n_A U2A', U2A'; complex (nuclear protein/RNA), RNA, snRNP, ribonucleoprotein, RNA binding protein/RNA complex; 2.38A {Homo sapiens} SCOP: c.10.2.4
Probab=99.54 E-value=8.4e-15 Score=145.70 Aligned_cols=133 Identities=19% Similarity=0.203 Sum_probs=94.4
Q ss_pred ccCCCCCceEecCCCcccccCCccccCCC-cCceEecCCCccccccccccCcCCCcEEEeccccccCCCccccccccccc
Q 002021 420 ICNLAELYRLDLDGNKLSGSIPACFSNLT-SLRIVSLGSNELTSIPLTFWNLKDILNLNFSSNFLTGSLPLEIGSLKVLV 498 (979)
Q Consensus 420 ~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~-~L~~L~L~~N~l~~lp~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~ 498 (979)
+.++.+|+.|++++|+++. ++. +..+. +|++|++++|+++.+ ..+..+++|+.|++++|++++..+..++.+++|+
T Consensus 15 ~~~~~~L~~L~l~~n~l~~-i~~-~~~~~~~L~~L~Ls~N~l~~~-~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~ 91 (176)
T 1a9n_A 15 YTNAVRDRELDLRGYKIPV-IEN-LGATLDQFDAIDFSDNEIRKL-DGFPLLRRLKTLLVNNNRICRIGEGLDQALPDLT 91 (176)
T ss_dssp EECTTSCEEEECTTSCCCS-CCC-GGGGTTCCSEEECCSSCCCEE-CCCCCCSSCCEEECCSSCCCEECSCHHHHCTTCC
T ss_pred cCCcCCceEEEeeCCCCch-hHH-hhhcCCCCCEEECCCCCCCcc-cccccCCCCCEEECCCCcccccCcchhhcCCCCC
Confidence 4555666666666666663 333 33333 677777777777766 4666677777777777777755444457778888
Q ss_pred eEeccCCccCcccch--hhcCCcccceeecCCccccCCCCCc----ccccccccccccccccccc
Q 002021 499 GIDLSRNNFSGVIPT--EIGGLKNLEYLFLGYNRLQGSIPNS----FGDLISLKFLNLSNNNLSG 557 (979)
Q Consensus 499 ~L~Ls~N~l~~~~p~--~~~~l~~L~~L~Ls~N~l~~~~p~~----~~~l~~L~~L~Ls~N~l~~ 557 (979)
.|+|++|+|+ .+|. .+..+++|+.|++++|.++ .+|.. +..+++|+.||+++|.+..
T Consensus 92 ~L~L~~N~i~-~~~~~~~l~~l~~L~~L~l~~N~i~-~~~~~~~~~~~~l~~L~~Ld~~~n~~~~ 154 (176)
T 1a9n_A 92 ELILTNNSLV-ELGDLDPLASLKSLTYLCILRNPVT-NKKHYRLYVIYKVPQVRVLDFQKVKLKE 154 (176)
T ss_dssp EEECCSCCCC-CGGGGGGGGGCTTCCEEECCSSGGG-GSTTHHHHHHHHCTTCSEETTEECCHHH
T ss_pred EEECCCCcCC-cchhhHhhhcCCCCCEEEecCCCCC-CcHhHHHHHHHHCCccceeCCCcCCHHH
Confidence 8888888886 4454 7888888889999999888 55664 8888999999999988763
No 395
>4fs7_A Uncharacterized protein; leucine-rich repeats, protein binding, extracellular protein structural genomics; HET: MSE; 1.19A {Bacteroides ovatus}
Probab=99.50 E-value=3.6e-13 Score=152.56 Aligned_cols=197 Identities=15% Similarity=0.109 Sum_probs=137.4
Q ss_pred cccCCCcccEEEecCCCCCchhHHhhhcCCCCcEEEecCcccCCCccccccCCCCCceEecCCCcccccCCccccCCCcC
Q 002021 371 EISNLTNLRTIYLGGNKLNGSILITLSKLQKLQDLGLKDNKLEGSIPYDICNLAELYRLDLDGNKLSGSIPACFSNLTSL 450 (979)
Q Consensus 371 ~l~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L 450 (979)
.|.++++|+.+.+..| ++.+....|.++..|+.+.+..+... +...+....+|+.+.+..+ ++......|.++..|
T Consensus 180 ~F~~c~~L~~i~l~~~-~~~I~~~~F~~~~~L~~i~~~~~~~~--i~~~~~~~~~l~~i~ip~~-~~~i~~~~f~~~~~l 255 (394)
T 4fs7_A 180 LFSGCGKLKSIKLPRN-LKIIRDYCFAECILLENMEFPNSLYY--LGDFALSKTGVKNIIIPDS-FTELGKSVFYGCTDL 255 (394)
T ss_dssp TTTTCTTCCBCCCCTT-CCEECTTTTTTCTTCCBCCCCTTCCE--ECTTTTTTCCCCEEEECTT-CCEECSSTTTTCSSC
T ss_pred cccCCCCceEEEcCCC-ceEeCchhhccccccceeecCCCceE--eehhhcccCCCceEEECCC-ceecccccccccccc
Confidence 3445555555555444 34444455555666666555544332 2333344456777776543 333555677778888
Q ss_pred ceEecCCCccccccccccCcCCCcEEEeccccccCCCccccccccccceEeccCCccCcccchhhcCCcccceeecCCcc
Q 002021 451 RIVSLGSNELTSIPLTFWNLKDILNLNFSSNFLTGSLPLEIGSLKVLVGIDLSRNNFSGVIPTEIGGLKNLEYLFLGYNR 530 (979)
Q Consensus 451 ~~L~L~~N~l~~lp~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~ 530 (979)
+.+.+..+..+--...|..+..++.+....+.+. ...|..+.+|+.+.+..+ ++.+...+|.++++|+.++|.++
T Consensus 256 ~~~~~~~~~~~i~~~~F~~~~~l~~~~~~~~~i~---~~~F~~~~~L~~i~l~~~-i~~I~~~aF~~c~~L~~i~lp~~- 330 (394)
T 4fs7_A 256 ESISIQNNKLRIGGSLFYNCSGLKKVIYGSVIVP---EKTFYGCSSLTEVKLLDS-VKFIGEEAFESCTSLVSIDLPYL- 330 (394)
T ss_dssp CEEEECCTTCEECSCTTTTCTTCCEEEECSSEEC---TTTTTTCTTCCEEEECTT-CCEECTTTTTTCTTCCEECCCTT-
T ss_pred eeEEcCCCcceeeccccccccccceeccCceeec---cccccccccccccccccc-cceechhhhcCCCCCCEEEeCCc-
Confidence 8888877654433446777788888877766543 346788899999999765 66677788999999999999755
Q ss_pred ccCCCCCcccccccccccccccccccccCCccccCccccCeEeccCC
Q 002021 531 LQGSIPNSFGDLISLKFLNLSNNNLSGVIPASLEKLSYLEDLNLSFN 577 (979)
Q Consensus 531 l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N 577 (979)
++.+...+|.++.+|+.+++..| ++.+-..+|.++++|+.+++..|
T Consensus 331 v~~I~~~aF~~c~~L~~i~lp~~-l~~I~~~aF~~C~~L~~i~lp~~ 376 (394)
T 4fs7_A 331 VEEIGKRSFRGCTSLSNINFPLS-LRKIGANAFQGCINLKKVELPKR 376 (394)
T ss_dssp CCEECTTTTTTCTTCCEECCCTT-CCEECTTTBTTCTTCCEEEEEGG
T ss_pred ccEEhHHhccCCCCCCEEEECcc-ccEehHHHhhCCCCCCEEEECCC
Confidence 77566789999999999999887 77777889999999999998754
No 396
>3g39_A Variable lymphocyte receptor VLRB.2D; antibody, X-RAY, crystallography, immune system; 1.55A {Petromyzon marinus} PDB: 3g3a_A 3g3b_A 3twi_D
Probab=99.50 E-value=2.9e-14 Score=140.67 Aligned_cols=90 Identities=22% Similarity=0.235 Sum_probs=54.8
Q ss_pred cccceEeccCCccCcccchhhcCCcccceeecCCccccCCCCCcccccccccccccccccccccCCccccCccccCeEec
Q 002021 495 KVLVGIDLSRNNFSGVIPTEIGGLKNLEYLFLGYNRLQGSIPNSFGDLISLKFLNLSNNNLSGVIPASLEKLSYLEDLNL 574 (979)
Q Consensus 495 ~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L 574 (979)
.+|+.|+|++|+|++..|..|.++++|++|+|++|+|++..+..|.++++|++|+|++|+|++..+..|..+++|+.|+|
T Consensus 30 ~~l~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L 109 (170)
T 3g39_A 30 TTTQVLYLYDNQITKLEPGVFDRLTQLTRLDLDNNQLTVLPAGVFDKLTQLTQLSLNDNQLKSIPRGAFDNLKSLTHIWL 109 (170)
T ss_dssp TTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEEC
T ss_pred CCCcEEEcCCCcCCccChhhhcCcccCCEEECCCCCcCccChhhccCCCCCCEEECCCCccCEeCHHHhcCCCCCCEEEe
Confidence 44555555555555555556666666666666666666555555566666666666666666555555666666666666
Q ss_pred cCCcccccCC
Q 002021 575 SFNQLEGKIP 584 (979)
Q Consensus 575 ~~N~l~~~~p 584 (979)
++|+|+|..+
T Consensus 110 ~~N~~~c~c~ 119 (170)
T 3g39_A 110 LNNPWDCACS 119 (170)
T ss_dssp CSSCBCTTBG
T ss_pred CCCCCCCCch
Confidence 6666666554
No 397
>3g39_A Variable lymphocyte receptor VLRB.2D; antibody, X-RAY, crystallography, immune system; 1.55A {Petromyzon marinus} PDB: 3g3a_A 3g3b_A 3twi_D
Probab=99.48 E-value=5.7e-14 Score=138.59 Aligned_cols=108 Identities=24% Similarity=0.218 Sum_probs=89.7
Q ss_pred CceEecCCCccccccccccCcCCCcEEEeccccccCCCccccccccccceEeccCCccCcccchhhcCCcccceeecCCc
Q 002021 450 LRIVSLGSNELTSIPLTFWNLKDILNLNFSSNFLTGSLPLEIGSLKVLVGIDLSRNNFSGVIPTEIGGLKNLEYLFLGYN 529 (979)
Q Consensus 450 L~~L~L~~N~l~~lp~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N 529 (979)
.+.+++++|+++++|..+. ++|+.|+|++|+|++..|..|..+++|+.|+|++|+|++..+..|.++++|++|+|++|
T Consensus 11 ~~~l~~s~n~l~~ip~~~~--~~l~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~N 88 (170)
T 3g39_A 11 GTTVDCSGKSLASVPTGIP--TTTQVLYLYDNQITKLEPGVFDRLTQLTRLDLDNNQLTVLPAGVFDKLTQLTQLSLNDN 88 (170)
T ss_dssp TTEEECTTSCCSSCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred CCEEEeCCCCcCccCccCC--CCCcEEEcCCCcCCccChhhhcCcccCCEEECCCCCcCccChhhccCCCCCCEEECCCC
Confidence 4677778888887776653 67888888888888877888888888999999999998887778888999999999999
Q ss_pred cccCCCCCcccccccccccccccccccccC
Q 002021 530 RLQGSIPNSFGDLISLKFLNLSNNNLSGVI 559 (979)
Q Consensus 530 ~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~ 559 (979)
+|++..+..|..+++|++|+|++|.++...
T Consensus 89 ~l~~~~~~~~~~l~~L~~L~L~~N~~~c~c 118 (170)
T 3g39_A 89 QLKSIPRGAFDNLKSLTHIWLLNNPWDCAC 118 (170)
T ss_dssp CCCCCCTTTTTTCTTCCEEECCSSCBCTTB
T ss_pred ccCEeCHHHhcCCCCCCEEEeCCCCCCCCc
Confidence 998777777888999999999999888543
No 398
>2r9u_A Variable lymphocyte receptor; adaptive immunity, VLR, leucine-rich repeat, LRR, system; 2.10A {Petromyzon marinus}
Probab=99.47 E-value=6.8e-14 Score=138.50 Aligned_cols=90 Identities=22% Similarity=0.307 Sum_probs=47.8
Q ss_pred cccceEeccCCccCcccchhhcCCcccceeecCCccccCCCCCcccccccccccccccccccccCCccccCccccCeEec
Q 002021 495 KVLVGIDLSRNNFSGVIPTEIGGLKNLEYLFLGYNRLQGSIPNSFGDLISLKFLNLSNNNLSGVIPASLEKLSYLEDLNL 574 (979)
Q Consensus 495 ~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L 574 (979)
.+|+.|+|++|+|++..|..|.++++|++|+|++|+|++..+..|.++++|++|+|++|+|++..+..|..+++|+.|+|
T Consensus 33 ~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~l~~L~~L~L 112 (174)
T 2r9u_A 33 TDKQRLWLNNNQITKLEPGVFDHLVNLQQLYFNSNKLTAIPTGVFDKLTQLTQLDLNDNHLKSIPRGAFDNLKSLTHIYL 112 (174)
T ss_dssp TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCSEEEC
T ss_pred CCCcEEEeCCCCccccCHHHhcCCcCCCEEECCCCCCCccChhHhCCcchhhEEECCCCccceeCHHHhccccCCCEEEe
Confidence 34444555555555444555555555555555555555444444455555555555555555444444555555555555
Q ss_pred cCCcccccCC
Q 002021 575 SFNQLEGKIP 584 (979)
Q Consensus 575 ~~N~l~~~~p 584 (979)
++|+|.+..+
T Consensus 113 ~~N~~~c~~~ 122 (174)
T 2r9u_A 113 YNNPWDCECR 122 (174)
T ss_dssp CSSCBCTTBG
T ss_pred CCCCcccccc
Confidence 5555555433
No 399
>2r9u_A Variable lymphocyte receptor; adaptive immunity, VLR, leucine-rich repeat, LRR, system; 2.10A {Petromyzon marinus}
Probab=99.46 E-value=7.7e-14 Score=138.10 Aligned_cols=106 Identities=24% Similarity=0.225 Sum_probs=86.5
Q ss_pred ceEecCCCccccccccccCcCCCcEEEeccccccCCCccccccccccceEeccCCccCcccchhhcCCcccceeecCCcc
Q 002021 451 RIVSLGSNELTSIPLTFWNLKDILNLNFSSNFLTGSLPLEIGSLKVLVGIDLSRNNFSGVIPTEIGGLKNLEYLFLGYNR 530 (979)
Q Consensus 451 ~~L~L~~N~l~~lp~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~ 530 (979)
+.+++++|+++++|..+. ++|+.|+|++|+|++..|..|+.+++|+.|+|++|+|++..+..|.++++|++|+|++|+
T Consensus 15 ~~l~~~~n~l~~iP~~~~--~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~L~~N~ 92 (174)
T 2r9u_A 15 TLVNCQNIRLASVPAGIP--TDKQRLWLNNNQITKLEPGVFDHLVNLQQLYFNSNKLTAIPTGVFDKLTQLTQLDLNDNH 92 (174)
T ss_dssp SEEECCSSCCSSCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSC
T ss_pred cEEEeCCCCCCccCCCcC--CCCcEEEeCCCCccccCHHHhcCCcCCCEEECCCCCCCccChhHhCCcchhhEEECCCCc
Confidence 567777777777777654 678888888888888778888888888888888888887777778888888888998888
Q ss_pred ccCCCCCccccccccccccccccccccc
Q 002021 531 LQGSIPNSFGDLISLKFLNLSNNNLSGV 558 (979)
Q Consensus 531 l~~~~p~~~~~l~~L~~L~Ls~N~l~~~ 558 (979)
|++..+..|..+++|++|+|++|++...
T Consensus 93 l~~l~~~~~~~l~~L~~L~L~~N~~~c~ 120 (174)
T 2r9u_A 93 LKSIPRGAFDNLKSLTHIYLYNNPWDCE 120 (174)
T ss_dssp CCCCCTTTTTTCTTCSEEECCSSCBCTT
T ss_pred cceeCHHHhccccCCCEEEeCCCCcccc
Confidence 8866666688888899999999988743
No 400
>2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7
Probab=99.35 E-value=9e-13 Score=146.63 Aligned_cols=102 Identities=20% Similarity=0.190 Sum_probs=58.6
Q ss_pred EecCCC-ccccccccccCcCCCcEEEecc-ccccCCCccccccccccceEeccCCccCcccchhhcCCcccceeecCCcc
Q 002021 453 VSLGSN-ELTSIPLTFWNLKDILNLNFSS-NFLTGSLPLEIGSLKVLVGIDLSRNNFSGVIPTEIGGLKNLEYLFLGYNR 530 (979)
Q Consensus 453 L~L~~N-~l~~lp~~~~~l~~L~~L~ls~-N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~ 530 (979)
++++++ +|+.+|. +..+++|+.|+|++ |+|++..+..|+.+.+|+.|+|++|+|++.+|..|.++++|++|+|++|+
T Consensus 13 v~~~~~n~l~~ip~-l~~~~~L~~L~l~~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~ 91 (347)
T 2ifg_A 13 LRCTRDGALDSLHH-LPGAENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGLRFVAPDAFHFTPRLSRLNLSFNA 91 (347)
T ss_dssp EECCSSCCCTTTTT-SCSCSCCSEEECCSCSSCCEECGGGSCSCCCCSEEECCSSCCCEECTTGGGSCSCCCEEECCSSC
T ss_pred EEcCCCCCCCccCC-CCCCCCeeEEEccCCCCCCCcChhHhccccCCCEEECCCCccceeCHHHhcCCcCCCEEeCCCCc
Confidence 455554 5555555 55555555555553 55555555555666666666666666666555666666666666666666
Q ss_pred ccCCCCCccccccccccccccccccc
Q 002021 531 LQGSIPNSFGDLISLKFLNLSNNNLS 556 (979)
Q Consensus 531 l~~~~p~~~~~l~~L~~L~Ls~N~l~ 556 (979)
|++..+..|..++ |+.|+|++|.+.
T Consensus 92 l~~~~~~~~~~~~-L~~l~l~~N~~~ 116 (347)
T 2ifg_A 92 LESLSWKTVQGLS-LQELVLSGNPLH 116 (347)
T ss_dssp CSCCCSTTTCSCC-CCEEECCSSCCC
T ss_pred cceeCHHHcccCC-ceEEEeeCCCcc
Confidence 6644444444444 666666666655
No 401
>3un9_A NLR family member X1; leucine rich repeat (LRR), antiviral signaling, MAVS, TRAF6, UQCRC2, immune system; 2.65A {Homo sapiens}
Probab=99.34 E-value=6.1e-14 Score=156.55 Aligned_cols=61 Identities=16% Similarity=0.130 Sum_probs=27.9
Q ss_pred CCCceEecCCCcccccCCccc-----cCCCcCceEecCCCcccc-----ccccccCcCCCcEEEecccccc
Q 002021 424 AELYRLDLDGNKLSGSIPACF-----SNLTSLRIVSLGSNELTS-----IPLTFWNLKDILNLNFSSNFLT 484 (979)
Q Consensus 424 ~~L~~L~Ls~N~l~~~~~~~~-----~~l~~L~~L~L~~N~l~~-----lp~~~~~l~~L~~L~ls~N~l~ 484 (979)
++|+.|+|++|+|+......+ ...++|++|+|++|.|+. ++..+...++|++|+|++|.|+
T Consensus 126 ~~L~~L~Ls~n~l~~~~~~~L~~~L~~~~~~L~~L~Ls~n~l~~~~~~~l~~~L~~~~~L~~L~Ls~N~l~ 196 (372)
T 3un9_A 126 LRARKLGLQLNSLGPEACKDLRDLLLHDQCQITTLRLSNNPLTAAGVAVLMEGLAGNTSVTHLSLLHTGLG 196 (372)
T ss_dssp HTEEEEECCSSCCCHHHHHHHHHHHHSTTCCCCEEECCSSCCHHHHHHHHHHHHHTCSSCCEEECTTSSCH
T ss_pred HhccHhhcCCCCCCHHHHHHHHHHHHhcCCccceeeCCCCCCChHHHHHHHHHHhcCCCcCEEeCCCCCCC
Confidence 345555555555543322222 123455566666655543 2222334444444444444443
No 402
>3un9_A NLR family member X1; leucine rich repeat (LRR), antiviral signaling, MAVS, TRAF6, UQCRC2, immune system; 2.65A {Homo sapiens}
Probab=99.32 E-value=5.9e-14 Score=156.67 Aligned_cols=17 Identities=12% Similarity=-0.041 Sum_probs=8.2
Q ss_pred cCCCCccEEEccCCCCc
Q 002021 323 SNCKFLKYFDLSYNPLY 339 (979)
Q Consensus 323 ~~l~~L~~L~Ls~N~l~ 339 (979)
..+++|++|+|++|.+.
T Consensus 180 ~~~~~L~~L~Ls~N~l~ 196 (372)
T 3un9_A 180 AGNTSVTHLSLLHTGLG 196 (372)
T ss_dssp HTCSSCCEEECTTSSCH
T ss_pred hcCCCcCEEeCCCCCCC
Confidence 34444555555555443
No 403
>4gt6_A Cell surface protein; leucine rich repeats, putative protein binding, extracellula protein, structural genomics; HET: MSE; 1.80A {Faecalibacterium prausnitzii a2-165}
Probab=99.32 E-value=6.8e-11 Score=133.73 Aligned_cols=332 Identities=16% Similarity=0.166 Sum_probs=160.7
Q ss_pred cccccCCC-CCCceecCCCeeeecCCccccccCccceeeccCCCCcCC--CcccccCCCCCcCEEEccCCccccccCccc
Q 002021 193 PLKIGNLR-NLEKLDIGDNKLVGIAPIAIFNVSTLKILGLQDNSLSGC--LSSIGYARLPNLEILSLWGNNFSGTIPRFI 269 (979)
Q Consensus 193 p~~~~~l~-~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~--~~~~~~~~l~~L~~L~L~~N~l~~~~p~~l 269 (979)
..+|.+.. .|+.+.+-.+ ++.+...+|.++++|+.+.++.|.-+.+ +...+|..+.+|+.+.+..+ ++......|
T Consensus 56 ~~aF~~~~~~L~sI~iP~s-vt~Ig~~AF~~C~~L~~i~~~~n~p~~l~~Ig~~aF~~c~~L~~i~~~~~-~~~I~~~aF 133 (394)
T 4gt6_A 56 DRVFCNYKYVLTSVQIPDT-VTEIGSNAFYNCTSLKRVTIQDNKPSCVKKIGRQAFMFCSELTDIPILDS-VTEIDSEAF 133 (394)
T ss_dssp TTTTTTCCSCCCEEEECTT-CCEECTTTTTTCTTCCEEEEGGGCCCCCCEECTTTTTTCTTCCBCGGGTT-CSEECTTTT
T ss_pred HhhccCCCCcCEEEEECCC-eeEEhHHHhhCCccCceEeecCCCCCeeeEechhhchhcccceeeccCCc-cceehhhhh
Confidence 44566653 4777777644 6666677777777777777766542211 22334555555555554433 222333444
Q ss_pred ccCCCCcEEeccccccccccCccccccccccceeccccccccccchhhhhhcccCCCCccEEEccCCCCcccCCcccccc
Q 002021 270 FNASKLSILDLEGNSFSGFIPNTFGNLRNLSWLVLSDNYLTSSTQELSFLSSLSNCKFLKYFDLSYNPLYRILPRTTVGN 349 (979)
Q Consensus 270 ~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~~ 349 (979)
..+.+|+.+.+..+ +..+....|.++.+|+.+.+.++ +..+....|..
T Consensus 134 ~~c~~L~~i~lp~~-~~~I~~~~F~~c~~L~~i~~~~~------------------------------~~~I~~~aF~~- 181 (394)
T 4gt6_A 134 HHCEELDTVTIPEG-VTSVADGMFSYCYSLHTVTLPDS------------------------------VTAIEERAFTG- 181 (394)
T ss_dssp TTCTTCCEEECCTT-CCEECTTTTTTCTTCCEEECCTT------------------------------CCEECTTTTTT-
T ss_pred hhhcccccccccce-eeeecccceecccccccccccce------------------------------eeEeccccccc-
Confidence 44555555555432 22233344444444444444332 22232222211
Q ss_pred ccccccEEEccCccccCCCCccccCCCcccEEEecCCCCCchhHHhhhcCCCCcEEEecCcccCCCccccccCCCCCceE
Q 002021 350 LSHSLEEFKMSNCNISGGIPEEISNLTNLRTIYLGGNKLNGSILITLSKLQKLQDLGLKDNKLEGSIPYDICNLAELYRL 429 (979)
Q Consensus 350 l~~~L~~L~L~~n~i~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L 429 (979)
..|+.+.+..+-. ......|..+.+++......+.........+........ ....+.....+..+
T Consensus 182 --~~l~~i~ip~~~~-~i~~~af~~c~~l~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~ 247 (394)
T 4gt6_A 182 --TALTQIHIPAKVT-RIGTNAFSECFALSTITSDSESYPAIDNVLYEKSANGDY-----------ALIRYPSQREDPAF 247 (394)
T ss_dssp --CCCSEEEECTTCC-EECTTTTTTCTTCCEEEECCSSSCBSSSCEEEECTTSCE-----------EEEECCTTCCCSEE
T ss_pred --cceeEEEECCccc-ccccchhhhccccceecccccccccccceeecccccccc-----------cccccccccccceE
Confidence 2344444433221 133445666666666665554433211111111000000 00011112223333
Q ss_pred ecCCCcccccCCccccCCCcCceEecCCCcccccc-ccccCcCCCcEEEeccccccCCCccccccccccceEeccCCccC
Q 002021 430 DLDGNKLSGSIPACFSNLTSLRIVSLGSNELTSIP-LTFWNLKDILNLNFSSNFLTGSLPLEIGSLKVLVGIDLSRNNFS 508 (979)
Q Consensus 430 ~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~lp-~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~ 508 (979)
.+. +.+......+|.++.+|+.+.+.++.. .++ ..|.++.+|+.+.+. +.++......|.++.+|+.++|..+ ++
T Consensus 248 ~ip-~~v~~i~~~aF~~c~~L~~i~lp~~~~-~I~~~aF~~c~~L~~i~l~-~~i~~I~~~aF~~c~~L~~i~lp~~-v~ 323 (394)
T 4gt6_A 248 KIP-NGVARIETHAFDSCAYLASVKMPDSVV-SIGTGAFMNCPALQDIEFS-SRITELPESVFAGCISLKSIDIPEG-IT 323 (394)
T ss_dssp ECC-TTEEEECTTTTTTCSSCCEEECCTTCC-EECTTTTTTCTTCCEEECC-TTCCEECTTTTTTCTTCCEEECCTT-CC
T ss_pred EcC-CcceEcccceeeecccccEEecccccc-eecCcccccccccccccCC-CcccccCceeecCCCCcCEEEeCCc-cc
Confidence 332 223334455666666677666654433 333 245566666666664 3444444556677777777777644 55
Q ss_pred cccchhhcCCcccceeecCCccccCCCCCcccccccccccccccccccccCCccccCccccCeEeccCCccc
Q 002021 509 GVIPTEIGGLKNLEYLFLGYNRLQGSIPNSFGDLISLKFLNLSNNNLSGVIPASLEKLSYLEDLNLSFNQLE 580 (979)
Q Consensus 509 ~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~ 580 (979)
.+...+|.++.+|+.+.+..+ ++.+...+|.++++|+.+++.+|.... ..+.....|+.+.+..|.++
T Consensus 324 ~I~~~aF~~C~~L~~i~ip~s-v~~I~~~aF~~C~~L~~i~~~~~~~~~---~~~~~~~~L~~i~i~~~~~~ 391 (394)
T 4gt6_A 324 QILDDAFAGCEQLERIAIPSS-VTKIPESAFSNCTALNNIEYSGSRSQW---NAISTDSGLQNLPVAPGSID 391 (394)
T ss_dssp EECTTTTTTCTTCCEEEECTT-CCBCCGGGGTTCTTCCEEEESSCHHHH---HTCBCCCCC-----------
T ss_pred EehHhHhhCCCCCCEEEECcc-cCEEhHhHhhCCCCCCEEEECCceeeh---hhhhccCCCCEEEeCCCCEE
Confidence 455667777777777777544 554555677777777777777765431 34556666777766665543
No 404
>4gt6_A Cell surface protein; leucine rich repeats, putative protein binding, extracellula protein, structural genomics; HET: MSE; 1.80A {Faecalibacterium prausnitzii a2-165}
Probab=99.29 E-value=9.7e-11 Score=132.48 Aligned_cols=115 Identities=13% Similarity=0.124 Sum_probs=62.9
Q ss_pred ccccCCccccCCC-CCcEEEccCCccCchhhhhhhccCCcccCCCCccceeeccccc---ccccccccccCCCCCCceec
Q 002021 132 LSGTFPSFISNKS-SLQHLDLSSNALSGEIRANICREIPREFGNLPELELMSLAANN---LQGKIPLKIGNLRNLEKLDI 207 (979)
Q Consensus 132 l~~~~p~~l~~l~-~L~~L~Ls~N~l~~~~~~~~~~~ip~~l~~l~~L~~L~L~~N~---l~~~~p~~~~~l~~L~~L~L 207 (979)
++.+...+|.+++ .|+.+.+..+ ++.. -..+|.++++|+.+.+..|. ++..-..+|.++.+|+.+.+
T Consensus 51 Vt~Ig~~aF~~~~~~L~sI~iP~s-vt~I--------g~~AF~~C~~L~~i~~~~n~p~~l~~Ig~~aF~~c~~L~~i~~ 121 (394)
T 4gt6_A 51 VSKIGDRVFCNYKYVLTSVQIPDT-VTEI--------GSNAFYNCTSLKRVTIQDNKPSCVKKIGRQAFMFCSELTDIPI 121 (394)
T ss_dssp EEEECTTTTTTCCSCCCEEEECTT-CCEE--------CTTTTTTCTTCCEEEEGGGCCCCCCEECTTTTTTCTTCCBCGG
T ss_pred eeEcCHhhccCCCCcCEEEEECCC-eeEE--------hHHHhhCCccCceEeecCCCCCeeeEechhhchhcccceeecc
Confidence 3434455677764 5888887654 3321 13467777777777776653 44333455666666666666
Q ss_pred CCCeeeecCCccccccCccceeeccCCCCcCCCcccccCCCCCcCEEEccC
Q 002021 208 GDNKLVGIAPIAIFNVSTLKILGLQDNSLSGCLSSIGYARLPNLEILSLWG 258 (979)
Q Consensus 208 s~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~l~~L~~L~L~~ 258 (979)
..+ ++.+...+|.++.+|+.+.+..+. .. .....|..+.+|+.+.+..
T Consensus 122 ~~~-~~~I~~~aF~~c~~L~~i~lp~~~-~~-I~~~~F~~c~~L~~i~~~~ 169 (394)
T 4gt6_A 122 LDS-VTEIDSEAFHHCEELDTVTIPEGV-TS-VADGMFSYCYSLHTVTLPD 169 (394)
T ss_dssp GTT-CSEECTTTTTTCTTCCEEECCTTC-CE-ECTTTTTTCTTCCEEECCT
T ss_pred CCc-cceehhhhhhhhccccccccccee-ee-ecccceecccccccccccc
Confidence 543 444555556666666666654332 11 1222345555555555543
No 405
>2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7
Probab=99.27 E-value=4.5e-12 Score=140.96 Aligned_cols=131 Identities=21% Similarity=0.228 Sum_probs=108.1
Q ss_pred cEEEeccc-cccCCCccccccccccceEeccC-CccCcccchhhcCCcccceeecCCccccCCCCCcccccccccccccc
Q 002021 474 LNLNFSSN-FLTGSLPLEIGSLKVLVGIDLSR-NNFSGVIPTEIGGLKNLEYLFLGYNRLQGSIPNSFGDLISLKFLNLS 551 (979)
Q Consensus 474 ~~L~ls~N-~l~~~~p~~~~~l~~L~~L~Ls~-N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls 551 (979)
..++.+++ +|++ +|. +..+.+|+.|+|++ |+|++..|..|+++++|+.|+|++|+|++..|..|.+|++|+.|||+
T Consensus 11 ~~v~~~~~n~l~~-ip~-l~~~~~L~~L~l~~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~ 88 (347)
T 2ifg_A 11 SGLRCTRDGALDS-LHH-LPGAENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGLRFVAPDAFHFTPRLSRLNLS 88 (347)
T ss_dssp SCEECCSSCCCTT-TTT-SCSCSCCSEEECCSCSSCCEECGGGSCSCCCCSEEECCSSCCCEECTTGGGSCSCCCEEECC
T ss_pred CEEEcCCCCCCCc-cCC-CCCCCCeeEEEccCCCCCCCcChhHhccccCCCEEECCCCccceeCHHHhcCCcCCCEEeCC
Confidence 35788888 8985 777 99999999999996 99999988999999999999999999999999999999999999999
Q ss_pred cccccccCCccccCccccCeEeccCCcccccCCCCCCCCCc---ccccccCCccccCCCC
Q 002021 552 NNNLSGVIPASLEKLSYLEDLNLSFNQLEGKIPRGGSFGNF---SAQSFEGNELLCGSPN 608 (979)
Q Consensus 552 ~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~~~---~~~~~~~N~~~c~~p~ 608 (979)
+|+|++..+..|..++ |+.|+|++|+|.+...- .+|..+ ....+..+...|..|.
T Consensus 89 ~N~l~~~~~~~~~~~~-L~~l~l~~N~~~c~c~l-~~~~~~~~~~~~~l~~~~~~C~~~~ 146 (347)
T 2ifg_A 89 FNALESLSWKTVQGLS-LQELVLSGNPLHCSCAL-RWLQRWEEEGLGGVPEQKLQCHGQG 146 (347)
T ss_dssp SSCCSCCCSTTTCSCC-CCEEECCSSCCCCCGGG-HHHHHHHHTTCSSCGGGCCCCSSSS
T ss_pred CCccceeCHHHcccCC-ceEEEeeCCCccCCCcc-HHHHHHHHhCcccccccCCCCCCCh
Confidence 9999987777777777 99999999999986542 111111 1223445667776653
No 406
>3tm0_A Aminoglycoside 3'-phosphotransferase; protein kinase, phosphorylation, transferase-antibiotic COMP; HET: ANP B31; 2.10A {Enterococcus faecalis} SCOP: d.144.1.6 PDB: 2b0q_A* 1l8t_A* 3q2j_A* 1j7i_A* 1j7u_A* 3h8p_A* 1j7l_A* 2bkk_A*
Probab=99.22 E-value=2.4e-11 Score=129.22 Aligned_cols=146 Identities=14% Similarity=0.074 Sum_probs=114.7
Q ss_pred HhhCCCCCCceeeeecceEEEEEEcCCCcEEEEEEeccccccchhcHHHHHHHHHhcC-CCCeeeEEEeeccCCeeEEEE
Q 002021 679 RATDGFSENNLIGRGGFGSVYKASLGDGMEVAVKVFTSQCGRAFKSFDVECEIMKSIR-HRNLIKVISSCSNEEFKALVL 757 (979)
Q Consensus 679 ~~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~~~~lv~ 757 (979)
...++|.....++.|+.+.||++... ++.+++|+...........+.+|+++++.+. +..+.++++++.+.+..++||
T Consensus 11 ~~l~~~~~~~~~~g~s~~~v~~~~~~-~~~~vlK~~~~~~~~~~~~~~~E~~~l~~l~~~~~vP~v~~~~~~~~~~~lv~ 89 (263)
T 3tm0_A 11 KLIEKYRCVKDTEGMSPAKVYKLVGE-NENLYLKMTDSRYKGTTYDVEREKDMMLWLEGKLPVPKVLHFERHDGWSNLLM 89 (263)
T ss_dssp HHHTTSEEEECCSCCSSSEEEEEECS-SCEEEEEEECGGGTTSTTCHHHHHHHHHHHTTTSCCCCEEEEEEETTEEEEEE
T ss_pred HHhccceeEeeccCCCCCeEEEEECC-CCcEEEEeCCcccCCCHHHHHHHHHHHHHHhcCCCCCeEEEEEecCCceEEEE
Confidence 34467877788888999999999764 6789999986533234467899999999985 677888999998888999999
Q ss_pred EecCCCccceeeccCCCCCCHHHHHHHHHHHHHHHHHHhcC---------------------------------------
Q 002021 758 EYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFG--------------------------------------- 798 (979)
Q Consensus 758 E~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~L~~LH~~--------------------------------------- 798 (979)
||++|.++.+.+.. ......++.+++++++.||..
T Consensus 90 e~i~G~~l~~~~~~------~~~~~~~~~~l~~~l~~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (263)
T 3tm0_A 90 SEADGVLCSEEYED------EQSPEKIIELYAECIRLFHSIDISDCPYTNSLDSRLAELDYLLNNDLADVDCENWEEDTP 163 (263)
T ss_dssp ECCSSEEHHHHCCT------TTCHHHHHHHHHHHHHHHHHSCCTTCSCBCCHHHHHHHHHHHHHTTCSCCSGGGGSTTCS
T ss_pred EecCCeehhhccCC------cccHHHHHHHHHHHHHHHhCCCcccCCCcchHHHHHHHHHHHHhcccccccccccccccc
Confidence 99999998765321 123447889999999999941
Q ss_pred -----------------CCCCeEecCCCCCCEEeCCCCcEEEEeeccccc
Q 002021 799 -----------------YSAPVIHCDLKPSNVLLDDNMVAHLSDFSIAKM 831 (979)
Q Consensus 799 -----------------~~~~i~H~Dik~~NIll~~~~~~kl~Dfg~~~~ 831 (979)
....++|+|+++.||+++++..+.|+||+.+..
T Consensus 164 ~~~~~~l~~~l~~~~~~~~~~l~HgDl~~~Nil~~~~~~~~lIDwe~a~~ 213 (263)
T 3tm0_A 164 FKDPRELYDFLKTEKPEEELVFSHGDLGDSNIFVKDGKVSGFIDLGRSGR 213 (263)
T ss_dssp SSSHHHHHHHHHHCCCCCCEEEECSSCCTTSEEEETTEEEEECCCTTCEE
T ss_pred CCCHHHHHHHHHhcCCCCCceEECCCCCcCcEEEECCcEEEEEEchhccc
Confidence 014589999999999998766677999987643
No 407
>1nd4_A Aminoglycoside 3'-phosphotransferase; protein kinase, ATPase, kanamycin; HET: KAN; 2.10A {Klebsiella pneumoniae} SCOP: d.144.1.6
Probab=99.12 E-value=1.1e-10 Score=123.83 Aligned_cols=129 Identities=17% Similarity=0.102 Sum_probs=99.0
Q ss_pred eeecceEEEEEEcCCCcEEEEEEeccccccchhcHHHHHHHHHhcCCCC--eeeEEEeeccCCeeEEEEEecCCCcccee
Q 002021 691 GRGGFGSVYKASLGDGMEVAVKVFTSQCGRAFKSFDVECEIMKSIRHRN--LIKVISSCSNEEFKALVLEYMPHGSLEKY 768 (979)
Q Consensus 691 G~G~~g~Vy~~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~h~n--iv~l~~~~~~~~~~~lv~E~~~~g~L~~~ 768 (979)
+.|..+.||++...+|+.++||+.... ....+.+|+++++.+++.+ +.+++++...++..++||||++|.++.
T Consensus 29 ~gg~~~~v~~~~~~~g~~~vlK~~~~~---~~~~~~~E~~~l~~l~~~~~~vP~~~~~~~~~~~~~~v~e~i~G~~l~-- 103 (264)
T 1nd4_A 29 IGCSDAAVFRLSAQGRPVLFVKTDLSG---ALNELQDEAARLSWLATTGVPCAAVLDVVTEAGRDWLLLGEVPGQDLL-- 103 (264)
T ss_dssp CTTSSCEEEEEECTTSCCEEEEEECSC---TTSCHHHHHHHHHHHHTTTCCBCCEEEEEECSSCEEEEEECCSSEETT--
T ss_pred cCCCCceEEEEecCCCCeEEEEeCCcc---cchhhhHHHHHHHHHHhCCCCCCeEEEeccCCCCCEEEEEecCCcccC--
Confidence 455669999998777888999987543 3467889999999996544 455888888888899999999998884
Q ss_pred eccCCCCCCHHHHHHHHHHHHHHHHHHhcCC-------------------------------------------------
Q 002021 769 LYSSNCILDIFQRLNIMIDVASALEYLHFGY------------------------------------------------- 799 (979)
Q Consensus 769 l~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~------------------------------------------------- 799 (979)
... .+ ...++.++++.++.||...
T Consensus 104 ~~~----~~---~~~~~~~l~~~l~~lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 176 (264)
T 1nd4_A 104 SSH----LA---PAEKVSIMADAMRRLHTLDPATCPFDHQAKHRIERARTRMEAGLVDQDDLDEEHQGLAPAELFARLKA 176 (264)
T ss_dssp TSC----CC---HHHHHHHHHHHHHHHTTSCGGGCCCBCCHHHHHHHHHHHHHTTCCCTTSCCGGGTTCCHHHHHHHHHH
T ss_pred cCc----CC---HhHHHHHHHHHHHHHhCCCCCCCCCchHHHHHHHHHHHHHhcCCccchhhhhhccCccHHHHHHHHHH
Confidence 211 12 2367888889999999311
Q ss_pred ------CCCeEecCCCCCCEEeCCCCcEEEEeeccccc
Q 002021 800 ------SAPVIHCDLKPSNVLLDDNMVAHLSDFSIAKM 831 (979)
Q Consensus 800 ------~~~i~H~Dik~~NIll~~~~~~kl~Dfg~~~~ 831 (979)
...++|+|++|.||+++++..+.++|||.+..
T Consensus 177 ~~~~~~~~~l~HgDl~~~Nil~~~~~~~~liD~~~a~~ 214 (264)
T 1nd4_A 177 RMPDGEDLVVTHGDACLPNIMVENGRFSGFIDCGRLGV 214 (264)
T ss_dssp TCCSSCCEEEECSSCCGGGEEEETTEEEEECCCTTCEE
T ss_pred hcCCCCCeEEECCCCCCCcEEEECCcEEEEEcchhccc
Confidence 01299999999999998877678999998753
No 408
>4h09_A Hypothetical leucine rich repeat protein; two LRR_5 domains, PF13306 family, structural genomics, JOIN for structural genomics, JCSG; 2.50A {Eubacterium ventriosum}
Probab=99.02 E-value=1.2e-08 Score=114.64 Aligned_cols=76 Identities=12% Similarity=0.104 Sum_probs=40.1
Q ss_pred cccccccccceEeccCCccCcccchhhcCCcccceeecCCccccCCCCCcccccccccccccccccccccCCccccCc
Q 002021 489 LEIGSLKVLVGIDLSRNNFSGVIPTEIGGLKNLEYLFLGYNRLQGSIPNSFGDLISLKFLNLSNNNLSGVIPASLEKL 566 (979)
Q Consensus 489 ~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l 566 (979)
..|.++.+|+.+++.++.++.+...+|.++.+|+.+.|..+ ++.+-..+|.++.+|+.+.+..+ ++.+-..+|.+.
T Consensus 280 ~aF~~c~~L~~i~l~~~~i~~I~~~aF~~c~~L~~i~lp~~-l~~I~~~aF~~C~~L~~i~ip~~-v~~I~~~aF~~c 355 (379)
T 4h09_A 280 LLCSGCSNLTKVVMDNSAIETLEPRVFMDCVKLSSVTLPTA-LKTIQVYAFKNCKALSTISYPKS-ITLIESGAFEGS 355 (379)
T ss_dssp TTTTTCTTCCEEEECCTTCCEECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTTCCCCCCCTT-CCEECTTTTTTS
T ss_pred cccccccccccccccccccceehhhhhcCCCCCCEEEcCcc-ccEEHHHHhhCCCCCCEEEECCc-cCEEchhHhhCC
Confidence 34555555555555555555444555555566666665533 44334455666666666666443 443444455444
No 409
>4h09_A Hypothetical leucine rich repeat protein; two LRR_5 domains, PF13306 family, structural genomics, JOIN for structural genomics, JCSG; 2.50A {Eubacterium ventriosum}
Probab=99.00 E-value=1.6e-08 Score=113.55 Aligned_cols=154 Identities=14% Similarity=0.161 Sum_probs=113.5
Q ss_pred cccCCCCCceEecCCCcccccCCccccCCCcCceEecCCCccccccc-cccCcCCCcEEEeccccccCCCcccccccccc
Q 002021 419 DICNLAELYRLDLDGNKLSGSIPACFSNLTSLRIVSLGSNELTSIPL-TFWNLKDILNLNFSSNFLTGSLPLEIGSLKVL 497 (979)
Q Consensus 419 ~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~lp~-~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L 497 (979)
.+.....+..+.+..+.. ......+....+|+.+.+..+ ++.++. .+.++..|+.+.+..+ ++......|.++.+|
T Consensus 189 ~~~~~~~~~~~~~~~~~~-~i~~~~f~~~~~l~~i~~~~~-~~~i~~~~f~~~~~L~~i~lp~~-v~~I~~~aF~~~~~l 265 (379)
T 4h09_A 189 SYPAAKTGTEFTIPSTVK-TVTAYGFSYGKNLKKITITSG-VTTLGDGAFYGMKALDEIAIPKN-VTSIGSFLLQNCTAL 265 (379)
T ss_dssp ECCTTCCCSEEECCTTCC-EECTTTTTTCSSCSEEECCTT-CCEECTTTTTTCSSCCEEEECTT-CCEECTTTTTTCTTC
T ss_pred ccccccccccccccccee-EEeecccccccccceeeeccc-eeEEccccccCCccceEEEcCCC-ccEeCccccceeehh
Confidence 344444555555544332 244566677777888877654 454543 5667788888888765 555566778888899
Q ss_pred ceEeccCCccCcccchhhcCCcccceeecCCccccCCCCCcccccccccccccccccccccCCccccCccccCeEeccCC
Q 002021 498 VGIDLSRNNFSGVIPTEIGGLKNLEYLFLGYNRLQGSIPNSFGDLISLKFLNLSNNNLSGVIPASLEKLSYLEDLNLSFN 577 (979)
Q Consensus 498 ~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N 577 (979)
+.+++..+ ++......|.++++|+.+.+.++.++.....+|.++.+|+.++|..+ ++.+-..+|.++.+|+.+.+..+
T Consensus 266 ~~i~l~~~-i~~i~~~aF~~c~~L~~i~l~~~~i~~I~~~aF~~c~~L~~i~lp~~-l~~I~~~aF~~C~~L~~i~ip~~ 343 (379)
T 4h09_A 266 KTLNFYAK-VKTVPYLLCSGCSNLTKVVMDNSAIETLEPRVFMDCVKLSSVTLPTA-LKTIQVYAFKNCKALSTISYPKS 343 (379)
T ss_dssp CEEEECCC-CSEECTTTTTTCTTCCEEEECCTTCCEECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTTCCCCCCCTT
T ss_pred cccccccc-ceeccccccccccccccccccccccceehhhhhcCCCCCCEEEcCcc-ccEEHHHHhhCCCCCCEEEECCc
Confidence 99988654 66566778999999999999999998667789999999999999765 77677788999999999988654
No 410
>2ra8_A Uncharacterized protein Q64V53_bacfr; WGR domain, LRR domain, leucine rich repeats, BFR43, structural genomics, PSI-2; 1.95A {Bacteroides fragilis}
Probab=98.98 E-value=1.1e-10 Score=128.95 Aligned_cols=216 Identities=14% Similarity=0.173 Sum_probs=106.8
Q ss_pred CCcEEEEEecCCCccc-cC-------CCCCcCCCCCCeeeccCCcccccCCccccccCcccEEecccccccccCCccccC
Q 002021 71 SQRVTVLNISSLNLTG-TI-------PSQLGNLSSLQSLNLSFNRLFGSIPSAIFTTYTLKYVCLRGNQLSGTFPSFISN 142 (979)
Q Consensus 71 ~~~v~~l~l~~~~l~g-~~-------~~~l~~l~~L~~L~L~~n~~~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~l~~ 142 (979)
..+|+.|.+....+.| .. .+++..+++|+.|.+.++.... ..++... .+.++..+..
T Consensus 106 ~~~v~~L~lg~~~~~~~~~~~~~~~L~~s~~~l~~L~~L~l~~~~~e~--------------~~is~~~-~~~L~~ll~~ 170 (362)
T 2ra8_A 106 LPSLKQITIGXWGYEGEDCSDIADGIVENKEKFAHFEGLFWGDIDFEE--------------QEISWIE-QVDLSPVLDA 170 (362)
T ss_dssp GGGCSEEEECCCCSSSCCSHHHHHHHHTTHHHHTTCSEEEECCCCTTT--------------CCGGGCB-CCBCHHHHHT
T ss_pred chhcceEEEcccccCCCcHHHHHHHHHHhhhhcchhhheeecCcchhh--------------ccccccc-ccCHHHHHhc
Confidence 3467777777655543 21 2334556677777665543210 0000000 1123344555
Q ss_pred CCCCcEEEccCCccCchhhhhhhccCCcccCCCCccceeeccccccccccccccc--CCCCCCceecCC--CeeeecCCc
Q 002021 143 KSSLQHLDLSSNALSGEIRANICREIPREFGNLPELELMSLAANNLQGKIPLKIG--NLRNLEKLDIGD--NKLVGIAPI 218 (979)
Q Consensus 143 l~~L~~L~Ls~N~l~~~~~~~~~~~ip~~l~~l~~L~~L~L~~N~l~~~~p~~~~--~l~~L~~L~Ls~--N~l~~~~p~ 218 (979)
+++|+.|+|++|. +. .+|. +. +++|+.|+|..+.++......++ .+++|++|+|+. |...+..
T Consensus 171 ~P~L~~L~L~g~~--~l-------~l~~-~~-~~~L~~L~L~~~~l~~~~l~~l~~~~lp~L~~L~L~~~~~~~~~~~-- 237 (362)
T 2ra8_A 171 MPLLNNLKIKGTN--NL-------SIGK-KP-RPNLKSLEIISGGLPDSVVEDILGSDLPNLEKLVLYVGVEDYGFDG-- 237 (362)
T ss_dssp CTTCCEEEEECCB--TC-------BCCS-CB-CTTCSEEEEECSBCCHHHHHHHHHSBCTTCCEEEEECBCGGGTCCS--
T ss_pred CCCCcEEEEeCCC--Cc-------eecc-cc-CCCCcEEEEecCCCChHHHHHHHHccCCCCcEEEEeccccccccch--
Confidence 6666666666552 00 1333 22 55666666666655433333332 566666666642 1111100
Q ss_pred cccccCccceeeccCCCCcCCCcccccCCCCCcCEEEccCCccccccCcccc---cCCCCcEEecccccccccc----Cc
Q 002021 219 AIFNVSTLKILGLQDNSLSGCLSSIGYARLPNLEILSLWGNNFSGTIPRFIF---NASKLSILDLEGNSFSGFI----PN 291 (979)
Q Consensus 219 ~l~~l~~L~~L~L~~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~l~---~l~~L~~L~Ls~N~l~~~~----~~ 291 (979)
.+..+ . .......+|+|++|+|++|.+.+..+..+. .+++|++|+|+.|.+++.. +.
T Consensus 238 ~~~~l---~-------------~~l~~~~~p~Lr~L~L~~~~i~~~~~~~la~a~~~~~L~~LdLs~n~L~d~G~~~L~~ 301 (362)
T 2ra8_A 238 DMNVF---R-------------PLFSKDRFPNLKWLGIVDAEEQNVVVEMFLESDILPQLETMDISAGVLTDEGARLLLD 301 (362)
T ss_dssp CGGGT---G-------------GGSCTTTCTTCCEEEEESCTTHHHHHHHHHHCSSGGGCSEEECCSSCCBHHHHHHHHT
T ss_pred hHHHH---H-------------HHHhcCCCCCcCEEeCCCCCCchHHHHHHHhCccCCCCCEEECCCCCCChHHHHHHHh
Confidence 00000 0 000012456777777777766643333333 3567777777777776532 33
Q ss_pred cccccccccceeccccccccccchhhhhhcccC-CCCccEEEccCCC
Q 002021 292 TFGNLRNLSWLVLSDNYLTSSTQELSFLSSLSN-CKFLKYFDLSYNP 337 (979)
Q Consensus 292 ~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~l~~-l~~L~~L~Ls~N~ 337 (979)
.+..+++|+.|+|++|.|+..... .+.. + ...++++.++
T Consensus 302 ~L~~l~~L~~L~L~~n~i~d~~~~-----~l~~al--g~~~~~~~~~ 341 (362)
T 2ra8_A 302 HVDKIKHLKFINMKYNYLSDEMKK-----ELQKSL--PMKIDVSDSQ 341 (362)
T ss_dssp THHHHTTCSEEECCSBBCCHHHHH-----HHHHHC--CSEEECCSBC
T ss_pred hcccCCcceEEECCCCcCCHHHHH-----HHHHHc--CCEEEecCCc
Confidence 345567788888888877653322 1221 1 3567888776
No 411
>3dxp_A Putative acyl-COA dehydrogenase; protein kinase-like fold, structural genomics, joint center structural genomics, JCSG; 2.32A {Ralstonia eutropha JMP134}
Probab=98.94 E-value=2.2e-09 Score=119.72 Aligned_cols=142 Identities=11% Similarity=0.163 Sum_probs=107.6
Q ss_pred CCceeeeecceEEEEEEcCCCcEEEEEEec--ccc-ccchhcHHHHHHHHHhcC--CCCeeeEEEeeccC---CeeEEEE
Q 002021 686 ENNLIGRGGFGSVYKASLGDGMEVAVKVFT--SQC-GRAFKSFDVECEIMKSIR--HRNLIKVISSCSNE---EFKALVL 757 (979)
Q Consensus 686 ~~~~lG~G~~g~Vy~~~~~~~~~vAvK~~~--~~~-~~~~~~~~~E~~~l~~l~--h~niv~l~~~~~~~---~~~~lv~ 757 (979)
..+.++.|.++.||+.+..+ ..+++|+.. ... ......+.+|+++++.++ +..+.++++++.+. +..++||
T Consensus 42 ~~~~l~~G~sn~~y~v~~~~-~~~vlr~~~~p~~~~~~~~~~~~~E~~~l~~L~~~~vpvP~~~~~~~~~~~~g~~~~vm 120 (359)
T 3dxp_A 42 SVEQFKGGQSNPTFKLVTPG-QTYVMRAKPGPKSKLLPSAHAIEREYRVMDALAGTDVPVAKMYALCEDESVIGRAFYIM 120 (359)
T ss_dssp EEEECCC-CCSCEEEEECSS-CEEEEECCCC----------CHHHHHHHHHHHTTSSSCCCCEEEEECCTTTTSSCEEEE
T ss_pred eEEEcCCcccceEEEEEECC-ceEEEEeCCCCCCCCCCcHHHHHHHHHHHHHhhcCCCCCCcEEEECCCCCccCCeEEEE
Confidence 35678999999999998754 578888875 322 123457889999999997 45678888888766 5589999
Q ss_pred EecCCCccceeeccCCCCCCHHHHHHHHHHHHHHHHHHhcCC--------------------------------------
Q 002021 758 EYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGY-------------------------------------- 799 (979)
Q Consensus 758 E~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~-------------------------------------- 799 (979)
||++|..+.+... ..++..++..++.++++.|+.||...
T Consensus 121 e~v~G~~l~~~~~---~~l~~~~~~~~~~~l~~~La~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 197 (359)
T 3dxp_A 121 EFVSGRVLWDQSL---PGMSPAERTAIYDEMNRVIAAMHTVDYQAIGLGDYGKPGNYFQRQIERWTKQYKLSETESIPAM 197 (359)
T ss_dssp ECCCCBCCCCTTC---TTCCHHHHHHHHHHHHHHHHHHHHSCTTTTTCTTSSCCSCHHHHHHHHHHHHHHHHCCSCCHHH
T ss_pred EecCCeecCCCcc---ccCCHHHHHHHHHHHHHHHHHHhCCCchhccccccCCCCCchHHHHHHHHHHHHhcCCcCChHH
Confidence 9999988855221 23678888999999999999999420
Q ss_pred -----------------CCCeEecCCCCCCEEeCCCCc--EEEEeeccccc
Q 002021 800 -----------------SAPVIHCDLKPSNVLLDDNMV--AHLSDFSIAKM 831 (979)
Q Consensus 800 -----------------~~~i~H~Dik~~NIll~~~~~--~kl~Dfg~~~~ 831 (979)
...++|+|+++.||+++.++. +.++||+.+..
T Consensus 198 ~~~~~~l~~~~~~~~~~~~~lvHgD~~~~Nil~~~~~~~v~~viDwe~a~~ 248 (359)
T 3dxp_A 198 DSLMDWLPQHIPQEDADLTSIVHGDYRLDNLMFHPTEPRVLAVLDWELSTL 248 (359)
T ss_dssp HHHHHHGGGCCCSTTSSCCEEECSSCSGGGEEECSSSSCEEEECCCTTCEE
T ss_pred HHHHHHHHhcCCCccCCCceEEeCCCCCCcEEEeCCCCcEEEEECcccccc
Confidence 257999999999999997653 68999998864
No 412
>3rw6_A Nuclear RNA export factor 1; retroviral constitutive transport element (CTE), RNA recogni motif (RRM); HET: GTP CCC; 2.30A {Homo sapiens} PDB: 3rw7_A 1koo_A 1koh_A 1ft8_A 1fo1_A
Probab=98.93 E-value=1.1e-11 Score=129.65 Aligned_cols=146 Identities=18% Similarity=0.236 Sum_probs=70.2
Q ss_pred CCccceeEeeCCCCcEEEEEecC---CCccccCCC-CCcCCCCCCeeeccCCcccccCCc-cccccCcccE--Eeccccc
Q 002021 59 VCNWTGVACEVHSQRVTVLNISS---LNLTGTIPS-QLGNLSSLQSLNLSFNRLFGSIPS-AIFTTYTLKY--VCLRGNQ 131 (979)
Q Consensus 59 ~c~w~gv~c~~~~~~v~~l~l~~---~~l~g~~~~-~l~~l~~L~~L~L~~n~~~~~~p~-~~~~l~~L~~--L~L~~n~ 131 (979)
.|+|.|+.|+....+|+.+-..+ ..+.|.+++ .+..++. .|...+|.-++.++- .+...+.|+. ++++.|+
T Consensus 77 l~~~~g~i~~~~~~ki~~~v~~~~~~~~~~~~l~~~~~~~Lk~--~l~~ryn~~~~~LdLs~l~~dp~L~~~~l~l~~N~ 154 (267)
T 3rw6_A 77 LKAVNYKILDRENRRISIIINSSAPPHTILNELKPEQVEQLKL--IMSKRYDGSQQALDLKGLRSDPDLVAQNIDVVLNR 154 (267)
T ss_dssp HHHTTSSCBCTTSCBCCCEEEECCCCHHHHTSCCHHHHHHHHH--HHHHTEETTTTEEECTTGGGCHHHHHTTCCCCTTS
T ss_pred HHhcCcEEECCCCCEEEEEEecCCCcccccccCCHHHHHHHHH--HHHhccchhccccCHHHcCCCcchhhcCccccCCH
Confidence 48999999998777887766554 234444442 2223322 233333333333221 1333334443 4555553
Q ss_pred cc---ccCCccccCCCCCcEEEccCCccCchhhhhhhccCCcccCCCCccceeecccccccccccccccCCC--CCCcee
Q 002021 132 LS---GTFPSFISNKSSLQHLDLSSNALSGEIRANICREIPREFGNLPELELMSLAANNLQGKIPLKIGNLR--NLEKLD 206 (979)
Q Consensus 132 l~---~~~p~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~~ip~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~--~L~~L~ 206 (979)
.. +.++....++++|+.|+||+|.|++. ..+|..++.+++|+.|+|++|+|++. ..+..+. +|++|+
T Consensus 155 ~~~~~~~l~i~~~~l~~L~~L~Ls~N~l~~l------~~l~~~~~~l~~L~~L~Ls~N~i~~~--~~l~~l~~l~L~~L~ 226 (267)
T 3rw6_A 155 RSCMAATLRIIEENIPELLSLNLSNNRLYRL------DDMSSIVQKAPNLKILNLSGNELKSE--RELDKIKGLKLEELW 226 (267)
T ss_dssp HHHHHHHHHHHHHHCTTCCEEECTTSCCCCC------GGGTTHHHHSTTCCEEECTTSCCCSG--GGGGGGTTSCCSEEE
T ss_pred HHHHHHHHHHHHhhCCCCCEEECCCCCCCCC------ccchhHHhhCCCCCEEECCCCccCCc--hhhhhcccCCcceEE
Confidence 22 22222223455666666666666542 12344444555555555555555532 1222222 455555
Q ss_pred cCCCeeee
Q 002021 207 IGDNKLVG 214 (979)
Q Consensus 207 Ls~N~l~~ 214 (979)
|++|.+.+
T Consensus 227 L~~Npl~~ 234 (267)
T 3rw6_A 227 LDGNSLCD 234 (267)
T ss_dssp CTTSTTGG
T ss_pred ccCCcCcc
Confidence 55555443
No 413
>2ra8_A Uncharacterized protein Q64V53_bacfr; WGR domain, LRR domain, leucine rich repeats, BFR43, structural genomics, PSI-2; 1.95A {Bacteroides fragilis}
Probab=98.93 E-value=3.7e-10 Score=124.75 Aligned_cols=84 Identities=21% Similarity=0.229 Sum_probs=56.8
Q ss_pred cccccceEeccCCccCcccchhhc---CCcccceeecCCccccCC----CCCcccccccccccccccccccccCCccccC
Q 002021 493 SLKVLVGIDLSRNNFSGVIPTEIG---GLKNLEYLFLGYNRLQGS----IPNSFGDLISLKFLNLSNNNLSGVIPASLEK 565 (979)
Q Consensus 493 ~l~~L~~L~Ls~N~l~~~~p~~~~---~l~~L~~L~Ls~N~l~~~----~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~ 565 (979)
.+++|+.|+|++|.+....+..+. .+++|+.|+|+.|.|++. ++..+..+++|+.|+|++|.|+...-..+..
T Consensus 250 ~~p~Lr~L~L~~~~i~~~~~~~la~a~~~~~L~~LdLs~n~L~d~G~~~L~~~L~~l~~L~~L~L~~n~i~d~~~~~l~~ 329 (362)
T 2ra8_A 250 RFPNLKWLGIVDAEEQNVVVEMFLESDILPQLETMDISAGVLTDEGARLLLDHVDKIKHLKFINMKYNYLSDEMKKELQK 329 (362)
T ss_dssp TCTTCCEEEEESCTTHHHHHHHHHHCSSGGGCSEEECCSSCCBHHHHHHHHTTHHHHTTCSEEECCSBBCCHHHHHHHHH
T ss_pred CCCCcCEEeCCCCCCchHHHHHHHhCccCCCCCEEECCCCCCChHHHHHHHhhcccCCcceEEECCCCcCCHHHHHHHHH
Confidence 356788888888777654443433 477888888888888753 3455567788888999888887443333332
Q ss_pred -ccccCeEeccCCc
Q 002021 566 -LSYLEDLNLSFNQ 578 (979)
Q Consensus 566 -l~~L~~L~L~~N~ 578 (979)
+ ...+++++|+
T Consensus 330 al--g~~~~~~~~~ 341 (362)
T 2ra8_A 330 SL--PMKIDVSDSQ 341 (362)
T ss_dssp HC--CSEEECCSBC
T ss_pred Hc--CCEEEecCCc
Confidence 2 3568888887
No 414
>3sg8_A APH(2'')-ID; antibiotic resistance enzyme, transferase, aminoglycoside, phosphorylation, transferase-antibiotic complex; HET: TOY; 1.80A {Enterococcus casseliflavus} PDB: 3sg9_A* 3n4v_A 3n4t_A 3n4u_A 3r81_A* 3r80_A* 3r7z_A* 3r82_A* 3vcq_A* 4dbx_A 4de4_A* 4dfb_A* 4dfu_A* 4dt9_A* 4dt8_A* 4dtb_A* 3sgc_A 4dta_A* 3lzh_A
Probab=98.81 E-value=4.9e-09 Score=113.87 Aligned_cols=184 Identities=18% Similarity=0.177 Sum_probs=123.3
Q ss_pred CceeeeecceEEEEEEcCCCcEEEEEEeccccccchhcHHHHHHHHHhcC-CCC--eeeEEEeeccCC---eeEEEEEec
Q 002021 687 NNLIGRGGFGSVYKASLGDGMEVAVKVFTSQCGRAFKSFDVECEIMKSIR-HRN--LIKVISSCSNEE---FKALVLEYM 760 (979)
Q Consensus 687 ~~~lG~G~~g~Vy~~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~-h~n--iv~l~~~~~~~~---~~~lv~E~~ 760 (979)
.+.++.|....||+.. ..+++|+.... .....+.+|+++++.+. +.. +.+++......+ ..|+||||+
T Consensus 25 i~~~~~G~~n~v~~v~----~~~vlR~~~~~--~~~~~~~~E~~~l~~l~~~~~v~vP~~~~~~~~~~~~~~~~~vm~~i 98 (304)
T 3sg8_A 25 IEISGEGNDCIAYEIN----RDFIFKFPKHS--RGSTNLFNEVNILKRIHNKLPLPIPEVVFTGMPSETYQMSFAGFTKI 98 (304)
T ss_dssp CCEEEECSSEEEEEST----TSEEEEEESSH--HHHHHHHHHHHHHHHHTTSSSSCCCCEEEECCCCSSCSCSCEEEECC
T ss_pred eEecCCCCcceEEEEC----CEEEEEecCCc--chHHHHHHHHHHHHHHHhcCCCCCCceEeecCCCCCCCcceEEEccc
Confidence 4679999999999864 45889986433 33567889999999884 322 334454443333 458999999
Q ss_pred CCCccceeeccCCCCCCHHHHHHHHHHHHHHHHHHhcC------------------------------------------
Q 002021 761 PHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFG------------------------------------------ 798 (979)
Q Consensus 761 ~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~L~~LH~~------------------------------------------ 798 (979)
+|.++.+.... .++.+++..++.++++.++.||..
T Consensus 99 ~G~~l~~~~~~---~l~~~~~~~~~~~l~~~la~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 175 (304)
T 3sg8_A 99 KGVPLTPLLLN---NLPKQSQNQAAKDLARFLSELHSINISGFKSNLVLDFREKINEDNKKIKKLLSRELKGPQMKKVDD 175 (304)
T ss_dssp CCEECCHHHHH---TSCHHHHHHHHHHHHHHHHHHHHSCCTTSCGGGBCCHHHHHHHHHHHHHHHHTTTSCHHHHHHHHH
T ss_pred CCeECCccccc---cCCHHHHHHHHHHHHHHHHHHHcCCCCCCCccchhhHHHHHHHHHHHHHHHhcccCCcccHHHHHH
Confidence 99888653322 367788888999999999999841
Q ss_pred -------------CCCCeEecCCCCCCEEeCC--CCcEEEEeeccccccCCCCCcceecccccCCCC---CCccccCC--
Q 002021 799 -------------YSAPVIHCDLKPSNVLLDD--NMVAHLSDFSIAKMLTGEDQSMIQTQTLATIGY---MAPEYGRE-- 858 (979)
Q Consensus 799 -------------~~~~i~H~Dik~~NIll~~--~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~y---~aPE~~~~-- 858 (979)
....++|+|+++.||++++ ...+.++||+.+..-.+...- . ....+ ..|+....
T Consensus 176 ~~~~~l~~~~~~~~~~~~~HgD~~~~N~l~~~~~~~~~~~iD~~~~~~~~~~~Dl---~---~~~~~~~~~~~~~~~~~l 249 (304)
T 3sg8_A 176 FYRDILENEIYFKYYPCLIHNDFSSDHILFDTEKNTICGIIDFGDAAISDPDNDF---I---SLMEDDEEYGMEFVSKIL 249 (304)
T ss_dssp HHHHHHTCGGGTCCCCEEECSCCCGGGEEEETTTTEEEEECCCTTCEEECTTHHH---H---TTCCTTTSCCHHHHHHHH
T ss_pred HHHHHHhccccccCCceeEeCCCCcccEEEeCCCCCEEEEEeCCCCccCChHHHH---H---HHHhhccccCHHHHHHHH
Confidence 0135899999999999998 566889999998653211000 0 00011 12221110
Q ss_pred ---CC---------CCCchhHHHHHHHHHHHHcCCCCCc
Q 002021 859 ---GR---------VSANGDVYSFGIMLMETFTGKKPTD 885 (979)
Q Consensus 859 ---~~---------~~~~~DvwslG~il~el~tg~~P~~ 885 (979)
+. .....+.|+++.++|.+.+|..+|.
T Consensus 250 ~~Y~~~~~~~~~~r~~~~~~~~~l~~~~~~~~~g~~~~~ 288 (304)
T 3sg8_A 250 NHYKHKDIPTVLEKYRMKEKYWSFEKIIYGKEYGYMDWY 288 (304)
T ss_dssp HHHTCSCHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHH
T ss_pred HHcCCCCcHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHH
Confidence 00 1112589999999999999998753
No 415
>1io0_A Tropomodulin; LRR protein, right-handed super-helix, protein binding; 1.45A {Gallus gallus} SCOP: c.10.1.1
Probab=98.72 E-value=6.7e-10 Score=110.80 Aligned_cols=123 Identities=16% Similarity=0.154 Sum_probs=69.7
Q ss_pred cCCCCCcCCCCCCeeeccCC-ccccc----CCccccccCcccEEeccccccccc----CCccccCCCCCcEEEccCCccC
Q 002021 87 TIPSQLGNLSSLQSLNLSFN-RLFGS----IPSAIFTTYTLKYVCLRGNQLSGT----FPSFISNKSSLQHLDLSSNALS 157 (979)
Q Consensus 87 ~~~~~l~~l~~L~~L~L~~n-~~~~~----~p~~~~~l~~L~~L~L~~n~l~~~----~p~~l~~l~~L~~L~Ls~N~l~ 157 (979)
.+...+...+.|++|+|++| .+... +...+...++|++|+|++|+++.. +...+...++|++|+|++|.|+
T Consensus 27 ~l~~~l~~~~~L~~L~L~~n~~i~~~g~~~l~~~L~~~~~L~~L~Ls~n~i~~~g~~~l~~~L~~n~~L~~L~L~~N~i~ 106 (185)
T 1io0_A 27 TLKRIQNNDPDLEEVNLNNIMNIPVPTLKACAEALKTNTYVKKFSIVGTRSNDPVAFALAEMLKVNNTLKSLNVESNFIS 106 (185)
T ss_dssp HHHHHHTTCTTCCEEECTTCTTCCHHHHHHHHHHHTTCCSCCEEECTTSCCCHHHHHHHHHHHHHCSSCCEEECCSSCCC
T ss_pred HHHHHHhcCCCCCEEEecCCCCCCHHHHHHHHHHHHhCCCcCEEECcCCCCChHHHHHHHHHHHhCCCcCEEECcCCcCC
Confidence 34455667788888888887 77643 334445556677777777776542 2334444566777777777776
Q ss_pred chhhhhhhccCCcccCCCCccceeec--cccccccc----ccccccCCCCCCceecCCCeee
Q 002021 158 GEIRANICREIPREFGNLPELELMSL--AANNLQGK----IPLKIGNLRNLEKLDIGDNKLV 213 (979)
Q Consensus 158 ~~~~~~~~~~ip~~l~~l~~L~~L~L--~~N~l~~~----~p~~~~~l~~L~~L~Ls~N~l~ 213 (979)
..+... +...+...+.|++|+| ++|.++.. +...+...++|++|+|++|.+.
T Consensus 107 ~~g~~~----l~~~L~~n~~L~~L~L~~~~N~i~~~g~~~l~~~L~~n~~L~~L~L~~n~i~ 164 (185)
T 1io0_A 107 GSGILA----LVEALQSNTSLIELRIDNQSQPLGNNVEMEIANMLEKNTTLLKFGYHFTQQG 164 (185)
T ss_dssp HHHHHH----HHHGGGGCSSCCEEECCCCSSCCCHHHHHHHHHHHHHCSSCCEEECCCSSHH
T ss_pred HHHHHH----HHHHHHhCCCceEEEecCCCCCCCHHHHHHHHHHHHhCCCcCEEeccCCCCC
Confidence 543322 3334455555666666 55665532 2233333455555555555543
No 416
>3r70_A Aminoglycoside phosphotransferase; structural genomics, center for structural genomics of infec diseases, csgid; HET: MSE ADP PE3; 1.80A {Escherichia coli} PDB: 3r6z_A* 3uzr_A* 4dca_A* 3hav_A* 3ham_A*
Probab=98.53 E-value=2.4e-07 Score=101.22 Aligned_cols=136 Identities=17% Similarity=0.199 Sum_probs=102.1
Q ss_pred CCCCCceeeeecceEEEEEEcCCCcEEEEEEeccccccchhcHHHHHHHHHhcCC---C-CeeeEEEeeccCCeeEEEEE
Q 002021 683 GFSENNLIGRGGFGSVYKASLGDGMEVAVKVFTSQCGRAFKSFDVECEIMKSIRH---R-NLIKVISSCSNEEFKALVLE 758 (979)
Q Consensus 683 ~~~~~~~lG~G~~g~Vy~~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~h---~-niv~l~~~~~~~~~~~lv~E 758 (979)
.+...+.++.|....||+. |+.+++|+.... .....+.+|+++++.+++ + .+.+++++ +..++|||
T Consensus 38 ~i~~v~~l~~G~~n~vy~v----g~~~vlR~~~~~--~~~~~~~~E~~~L~~L~~~~~~~~vP~v~~~----~~~~lvme 107 (320)
T 3r70_A 38 KINELRYLSSGDDSDTFLC----NEQYVVKVPKRD--SVRISQKRELELYRFLENCKLSYQIPAVVYQ----SDRFNIMK 107 (320)
T ss_dssp CCSCEEEEEECSSEEEEEE----TTTEEEEEESSH--HHHHHHHHHHHHHHHHTTSCCSSBCCCEEEE----CSSCEEEE
T ss_pred ceEEEEeCCCCCCceEEEE----CCEEEEEeCCcH--HHHHHHHHHHHHHHHHHhcCCCCCcceEEec----CCcEEEEe
Confidence 5566788999999999998 567889976432 223558899999998876 2 23344444 56789999
Q ss_pred ecCCCccceeeccCCCCCCHHHHHHHHHHHHHHHHHHhcCC---------------------------------------
Q 002021 759 YMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGY--------------------------------------- 799 (979)
Q Consensus 759 ~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~--------------------------------------- 799 (979)
|++|.++.+.... .++.+++..++.++++.++.||...
T Consensus 108 ~i~G~~l~~~~~~---~l~~~~~~~~~~~l~~~La~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 184 (320)
T 3r70_A 108 YIKGERITYEQYH---KLSEKEKDALAYDEATFLKELHSIEIDCSVSLFSDALVNKKDKFLQDKKLLISILEKEQLLTDE 184 (320)
T ss_dssp CCCCBCCCHHHHT---TSCHHHHHHHHHHHHHHHHHHHHSCCCTTSHHHHTTBCCHHHHHHHHHHHHHHHHHHTTCCCHH
T ss_pred ecCCccccccccc---cCCHHHHHHHHHHHHHHHHHHhCCCcccCCCccccccccchHHHHHHHHHHHHHHhhccccccc
Confidence 9999888643322 3567777888888888888888321
Q ss_pred ---------------------CCCeEecCCCCCCEEeCCCCcEEEEeeccccc
Q 002021 800 ---------------------SAPVIHCDLKPSNVLLDDNMVAHLSDFSIAKM 831 (979)
Q Consensus 800 ---------------------~~~i~H~Dik~~NIll~~~~~~kl~Dfg~~~~ 831 (979)
...++|+|++|.||+++.+..+.++||+.+..
T Consensus 185 ~~~~~~~~~~~~l~~~~~~~~~~~~~H~D~~~~N~l~~~~~~~~~iD~~~~~~ 237 (320)
T 3r70_A 185 MLEHIETIYENILSNAVLFKYTPCLVHNDFSANNMIFRNNRLFGVIDFGDFNV 237 (320)
T ss_dssp HHHHHHHHHHHHHTCGGGTCCCCEEECSCCSGGGEEEETTEEEEECCCTTCEE
T ss_pred chHHHHHHHHHHHhccccccCCceeeECCCCCCcEEEECCceEEEECCccccc
Confidence 12359999999999999976779999999865
No 417
>1io0_A Tropomodulin; LRR protein, right-handed super-helix, protein binding; 1.45A {Gallus gallus} SCOP: c.10.1.1
Probab=98.53 E-value=1.1e-08 Score=101.91 Aligned_cols=124 Identities=10% Similarity=0.068 Sum_probs=58.5
Q ss_pred ccccccCcccEEecccc-ccccc----CCccccCCCCCcEEEccCCccCchhhhhhhccCCcccCCCCccceeecccccc
Q 002021 114 SAIFTTYTLKYVCLRGN-QLSGT----FPSFISNKSSLQHLDLSSNALSGEIRANICREIPREFGNLPELELMSLAANNL 188 (979)
Q Consensus 114 ~~~~~l~~L~~L~L~~n-~l~~~----~p~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~~ip~~l~~l~~L~~L~L~~N~l 188 (979)
..+...++|++|+|++| .+... +...+...++|++|||++|.|+..+... +...+...+.|++|+|++|.|
T Consensus 30 ~~l~~~~~L~~L~L~~n~~i~~~g~~~l~~~L~~~~~L~~L~Ls~n~i~~~g~~~----l~~~L~~n~~L~~L~L~~N~i 105 (185)
T 1io0_A 30 RIQNNDPDLEEVNLNNIMNIPVPTLKACAEALKTNTYVKKFSIVGTRSNDPVAFA----LAEMLKVNNTLKSLNVESNFI 105 (185)
T ss_dssp HHHTTCTTCCEEECTTCTTCCHHHHHHHHHHHTTCCSCCEEECTTSCCCHHHHHH----HHHHHHHCSSCCEEECCSSCC
T ss_pred HHHhcCCCCCEEEecCCCCCCHHHHHHHHHHHHhCCCcCEEECcCCCCChHHHHH----HHHHHHhCCCcCEEECcCCcC
Confidence 33444555666666666 55432 2333444555666666666655433221 222333344455555555555
Q ss_pred ccc----ccccccCCCCCCceec--CCCeeeecCCccccccCccceeeccCCCCcCCCcccccCCCCCcCEEEccCCccc
Q 002021 189 QGK----IPLKIGNLRNLEKLDI--GDNKLVGIAPIAIFNVSTLKILGLQDNSLSGCLSSIGYARLPNLEILSLWGNNFS 262 (979)
Q Consensus 189 ~~~----~p~~~~~l~~L~~L~L--s~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~ 262 (979)
+.. +...+...++|++|+| ++|.|.......+ ...+...++|++|+|++|.+.
T Consensus 106 ~~~g~~~l~~~L~~n~~L~~L~L~~~~N~i~~~g~~~l---------------------~~~L~~n~~L~~L~L~~n~i~ 164 (185)
T 1io0_A 106 SGSGILALVEALQSNTSLIELRIDNQSQPLGNNVEMEI---------------------ANMLEKNTTLLKFGYHFTQQG 164 (185)
T ss_dssp CHHHHHHHHHGGGGCSSCCEEECCCCSSCCCHHHHHHH---------------------HHHHHHCSSCCEEECCCSSHH
T ss_pred CHHHHHHHHHHHHhCCCceEEEecCCCCCCCHHHHHHH---------------------HHHHHhCCCcCEEeccCCCCC
Confidence 422 2333334444444444 4444443211111 112344567777777777765
No 418
>3d1u_A Putative fructosamine-3-kinase; YP_290396.1, structural genomics, joint center for structural genomics, JCSG, protein structure initiative; 1.85A {Thermobifida fusca} PDB: 3f7w_A
Probab=98.45 E-value=1.1e-06 Score=93.97 Aligned_cols=77 Identities=16% Similarity=0.137 Sum_probs=61.3
Q ss_pred CCceeeeecceEEEEEEcCCCcEEEEEEeccccccchhcHHHHHHHHHhcCCC---CeeeEEEeeccCCeeEEEEEecCC
Q 002021 686 ENNLIGRGGFGSVYKASLGDGMEVAVKVFTSQCGRAFKSFDVECEIMKSIRHR---NLIKVISSCSNEEFKALVLEYMPH 762 (979)
Q Consensus 686 ~~~~lG~G~~g~Vy~~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~h~---niv~l~~~~~~~~~~~lv~E~~~~ 762 (979)
..+.|+.|.++.||+++..+|+.++||+...........+..|++.++.+++. .+.+++++. ..++||||+++
T Consensus 19 ~~~~l~gG~~n~vy~v~~~dG~~~vvK~~~~~~~~~~~~~~~E~~~L~~L~~~~~v~vP~v~~~~----~~~lvme~l~g 94 (288)
T 3d1u_A 19 AVAERGHSHRWHLYRVELADGTPLFVKALPDDAPALDGLFRAEALGLDWLGRSFGSPVPQVAGWD----DRTLAMEWVDE 94 (288)
T ss_dssp EEEEEEEETTEEEEEEEETTSCEEEEEECCTTCCCCTTHHHHHHHHHHHHTCSTTCCSCCEEEEE----TTEEEEECCCC
T ss_pred ceeeeCCcchhheEEEEeCCCCeEEEEecCCCCcchhHHHHHHHHHHHHHHhcCCCCcCeEEEec----CcEEEEEeccc
Confidence 45789999999999998888999999986543233346789999999999865 577777763 36899999999
Q ss_pred Cccc
Q 002021 763 GSLE 766 (979)
Q Consensus 763 g~L~ 766 (979)
+++.
T Consensus 95 ~~~~ 98 (288)
T 3d1u_A 95 RPPT 98 (288)
T ss_dssp CCCC
T ss_pred CCCC
Confidence 8753
No 419
>3rw6_A Nuclear RNA export factor 1; retroviral constitutive transport element (CTE), RNA recogni motif (RRM); HET: GTP CCC; 2.30A {Homo sapiens} PDB: 3rw7_A 1koo_A 1koh_A 1ft8_A 1fo1_A
Probab=98.36 E-value=9.3e-08 Score=99.90 Aligned_cols=68 Identities=29% Similarity=0.346 Sum_probs=35.0
Q ss_pred cCCCCCCceecCCCeeeecC--CccccccCccceeeccCCCCcCCCcccccCCCCCcCEEEccCCcccccc
Q 002021 197 GNLRNLEKLDIGDNKLVGIA--PIAIFNVSTLKILGLQDNSLSGCLSSIGYARLPNLEILSLWGNNFSGTI 265 (979)
Q Consensus 197 ~~l~~L~~L~Ls~N~l~~~~--p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~ 265 (979)
.++++|++|+|++|+|+++. |..+..+++|+.|+|++|+|++...-..+..+ +|++|+|++|.+.+.+
T Consensus 167 ~~l~~L~~L~Ls~N~l~~l~~l~~~~~~l~~L~~L~Ls~N~i~~~~~l~~l~~l-~L~~L~L~~Npl~~~~ 236 (267)
T 3rw6_A 167 ENIPELLSLNLSNNRLYRLDDMSSIVQKAPNLKILNLSGNELKSERELDKIKGL-KLEELWLDGNSLCDTF 236 (267)
T ss_dssp HHCTTCCEEECTTSCCCCCGGGTTHHHHSTTCCEEECTTSCCCSGGGGGGGTTS-CCSEEECTTSTTGGGC
T ss_pred hhCCCCCEEECCCCCCCCCccchhHHhhCCCCCEEECCCCccCCchhhhhcccC-CcceEEccCCcCcccc
Confidence 45566666666666666632 34444555555555555555544222222222 4555555555554433
No 420
>3tdw_A Gentamicin resistance protein; kinase, phosphoryl transfer, antibiotic resistance, transfer; HET: GDP; 1.70A {Enterococcus gallinarum} PDB: 3tdv_A*
Probab=98.28 E-value=2.8e-06 Score=91.86 Aligned_cols=136 Identities=14% Similarity=0.117 Sum_probs=96.2
Q ss_pred CceeeeecceEEEEEEcCCCcEEEEEEeccccccchhcHHHHHHHHHhcCCC---CeeeEEEeec-cCCeeEEEEEecCC
Q 002021 687 NNLIGRGGFGSVYKASLGDGMEVAVKVFTSQCGRAFKSFDVECEIMKSIRHR---NLIKVISSCS-NEEFKALVLEYMPH 762 (979)
Q Consensus 687 ~~~lG~G~~g~Vy~~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~h~---niv~l~~~~~-~~~~~~lv~E~~~~ 762 (979)
.+.++.|....||+. |..++||+... ......+.+|+++++.+++. .+.+.+.+.. ..+..++||||++|
T Consensus 24 v~~l~~G~~n~v~~v----g~~~VlR~~~~--~~~~~~~~~E~~~L~~L~~~~~v~VP~~~~~~~~~~g~~~~v~e~i~G 97 (306)
T 3tdw_A 24 VESLGEGFRNYAILV----NGDWVFRFPKS--QQGADELNKEIQLLPLLVGCVKVNIPQYVYIGKRSDGNPFVGYRKVQG 97 (306)
T ss_dssp EEEEEECSSEEEEEE----TTTEEEEEESS--HHHHHHHHHHHHHHHHHTTTCSSBCCCEEEEEECTTSCEEEEEECCCS
T ss_pred eeecCCCcceeEEEE----CCEEEEEecCC--chHHHHHHHHHHHHHHHHhcCCCCCCCeEeecccCCCceEEEEeccCC
Confidence 457889999999998 46688887532 23346788999999999752 3455666653 45667899999999
Q ss_pred CccceeeccCCCCCCHHHHHHHHHHHHHHHHHHhcC--------------------------------------------
Q 002021 763 GSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFG-------------------------------------------- 798 (979)
Q Consensus 763 g~L~~~l~~~~~~l~~~~~~~i~~~ia~~L~~LH~~-------------------------------------------- 798 (979)
.++.+.... .++..+...++.++++.++.||..
T Consensus 98 ~~l~~~~~~---~l~~~~~~~~~~~lg~~La~LH~~~~~~~~~~g~p~~~w~~~~~~~~~~~~~~~~~~l~~~~~~~l~~ 174 (306)
T 3tdw_A 98 QILGEDGMA---VLPDDAKDRLALQLAEFMNELSAFPVETAISAGVPVTNLKNKILLLSEAVEDQVFPLLDESLRDYLTL 174 (306)
T ss_dssp EECHHHHHT---TSCHHHHHHHHHHHHHHHHHHHHSCHHHHHHTTCCBCCHHHHHHHHHHHHHHHTGGGSCHHHHHHHHH
T ss_pred eECchhhhh---hCCHHHHHHHHHHHHHHHHHHhcCCcccccccCCChHHHHHHHHHHHHHHHHhcccccchhhHHHHHH
Confidence 888653211 235555666666666666666621
Q ss_pred -------------CCCCeEecCCCCCCEEeCC---CCc-EEEEeeccccc
Q 002021 799 -------------YSAPVIHCDLKPSNVLLDD---NMV-AHLSDFSIAKM 831 (979)
Q Consensus 799 -------------~~~~i~H~Dik~~NIll~~---~~~-~kl~Dfg~~~~ 831 (979)
....++|+|+++.||+++. ++. +.|+||+.+..
T Consensus 175 ~~~~~l~~~~~~~~~~~~~HgD~~~~N~l~~~~~~~~~~~~~iD~~~a~~ 224 (306)
T 3tdw_A 175 RFQSYMTHPVYTRYTPRLIHGDLSPDHFLTNLNSRQTPLTGIIDFGDAAI 224 (306)
T ss_dssp HHHHHHHCHHHHCCCCEEECSCCSGGGEEECTTCSSCCEEEECCCTTCEE
T ss_pred HHHHHHhCcccccCCCeeEeCCCCcccEEEecCCCCCceEEEEehhhcCC
Confidence 1335699999999999997 455 48999998754
No 421
>3ats_A Putative uncharacterized protein; hypothetical protein, putative aminoglycoside phosphortransf transferase; 1.67A {Mycobacterium tuberculosis} PDB: 3att_A*
Probab=98.22 E-value=3.1e-06 Score=93.96 Aligned_cols=144 Identities=11% Similarity=0.052 Sum_probs=94.2
Q ss_pred cee-eeecceEEEEEEcC-------CCcEEEEEEecccc---ccchhcHHHHHHHHHhcCC---CCeeeEEEeeccC---
Q 002021 688 NLI-GRGGFGSVYKASLG-------DGMEVAVKVFTSQC---GRAFKSFDVECEIMKSIRH---RNLIKVISSCSNE--- 750 (979)
Q Consensus 688 ~~l-G~G~~g~Vy~~~~~-------~~~~vAvK~~~~~~---~~~~~~~~~E~~~l~~l~h---~niv~l~~~~~~~--- 750 (979)
+.| +.|....+|+.+.. +++.+++|+..... ......+.+|+++++.++. -.+.++++++.+.
T Consensus 26 ~~l~~~G~~n~~y~v~~~~~~~~~~~~~~~vlR~~~~~~~~~~~~~~~~~~E~~~l~~L~~~~~vpvP~v~~~~~~~~~~ 105 (357)
T 3ats_A 26 SGVDSTGMSSETIILTARWQQDGRSIQQKLVARVAPAAEDVPVFPTYRLDHQFEVIRLVGELTDVPVPRVRWIETTGDVL 105 (357)
T ss_dssp EEECTTSSEEEEEEEEEEEEETTEEEEEEEEEEECCCGGGCCSSSCCCHHHHHHHHHHHHHHCCSCCCCEEEEECSSTTT
T ss_pred EECCCCCccceEEEEEEecccCCCCCCceEEEEeCCCCCccccCchhHHHHHHHHHHHHhhcCCCCCCcEEEEccCCCcc
Confidence 567 88999999998653 26788999865432 1123678899999998853 3566788877655
Q ss_pred CeeEEEEEecCCCccceeeccC-----CCCCCHHHHHHHHHHHHHHHHHHhc----------------------------
Q 002021 751 EFKALVLEYMPHGSLEKYLYSS-----NCILDIFQRLNIMIDVASALEYLHF---------------------------- 797 (979)
Q Consensus 751 ~~~~lv~E~~~~g~L~~~l~~~-----~~~l~~~~~~~i~~~ia~~L~~LH~---------------------------- 797 (979)
+..++||||++|.++.+.+... -..++.+++..++.++++.|+.||.
T Consensus 106 g~~~~v~e~l~G~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~La~LH~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 185 (357)
T 3ats_A 106 GTPFFLMDYVEGVVPPDVMPYTFGDNWFADAPAERQRQLQDATVAALATLHSIPNAQNTFSFLTQGRTSDTTLHRHFNWV 185 (357)
T ss_dssp SSCEEEEECCCCBCCCBTTBGGGSCSTTTTSCHHHHHHHHHHHHHHHHHHTTCSSHHHHTGGGC-----CCHHHHHHHHH
T ss_pred CCceEEEEecCCCChhhcCcccccccccCCCCHHHHHHHHHHHHHHHHHHhCCCCccCChhhccCCCCCCchHHHHHHHH
Confidence 4578999999998876532100 0012333333333444443333331
Q ss_pred --------------------------C-------CCCCeEecCCCCCCEEeCCCCcEEEEeeccccc
Q 002021 798 --------------------------G-------YSAPVIHCDLKPSNVLLDDNMVAHLSDFSIAKM 831 (979)
Q Consensus 798 --------------------------~-------~~~~i~H~Dik~~NIll~~~~~~kl~Dfg~~~~ 831 (979)
. ....++|+|+.+.||+++++..+.|+||+.+..
T Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~p~~~~~~~~~l~HgDl~~~Nil~~~~~~~~vIDwe~a~~ 252 (357)
T 3ats_A 186 RSWYDFAVEGIGRSPLLERTFEWLQSHWPDDAAAREPVLLWGDARVGNVLYRDFQPVAVLDWEMVAL 252 (357)
T ss_dssp HHHHHHHHHHHCCCHHHHHHHHHHHHTCCHHHHHSCCEEECSSCSGGGEEEETTEEEEECCGGGCEE
T ss_pred HHHHHhhccCCCCChHHHHHHHHHHHhCCCcccCCCceEEeCCCCCCeEEEeCCcEEEEEccccccc
Confidence 1 035789999999999999655579999998754
No 422
>4gkh_A Aminoglycoside 3'-phosphotransferase APHA1-IAB; pyrazolopyrimidine, 1-Na-PP1, bumped kinase inhibitor, BKI, kinase inhibitor; HET: KAN 0J9; 1.86A {Acinetobacter baumannii} PDB: 4feu_A* 4few_A* 4fex_A* 4fev_A* 4gki_A* 4ej7_A* 3r78_A*
Probab=98.21 E-value=3.5e-06 Score=89.45 Aligned_cols=136 Identities=16% Similarity=0.075 Sum_probs=98.5
Q ss_pred ceeeeecce-EEEEEEc-CCCcEEEEEEeccccccchhcHHHHHHHHHhcC-CCCeeeEEEeeccCCeeEEEEEecCCCc
Q 002021 688 NLIGRGGFG-SVYKASL-GDGMEVAVKVFTSQCGRAFKSFDVECEIMKSIR-HRNLIKVISSCSNEEFKALVLEYMPHGS 764 (979)
Q Consensus 688 ~~lG~G~~g-~Vy~~~~-~~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~~~~lv~E~~~~g~ 764 (979)
+.+..|..| .||+... .++..++||+-... ....+.+|+..|+.+. +--+.++++++.+++..++|||+++|.+
T Consensus 30 ~~~~~G~S~~~v~rl~~~~~~~~~~lk~~~~~---~~~~~~~E~~~l~~l~~~vPVP~v~~~~~~~~~~~lvme~l~G~~ 106 (272)
T 4gkh_A 30 ARDNVGQSGATIYRLYGKPNAPELFLKHGKGS---VANDVTDEMVRLNWLTAFMPLPTIKHFIRTPDDAWLLTTAIPGKT 106 (272)
T ss_dssp EEEECSSSSCEEEEEECCTTCCCEEEEEEETH---HHHHHHHHHHHHHHHTTTSCCCCEEEEEEETTEEEEEEECCCSEE
T ss_pred EEccCCCcCCeEEEEEecCCCeEEEEEECCCC---CHhHHHHHHHHHHHhccCCCcCeEEEEEEECCeEEEEEEeeCCcc
Confidence 356666666 6998854 35677899986533 3456788999999885 3346678888888899999999999987
Q ss_pred cceeeccCCCCCCHHHHHHHHHHHHHHHHHHhcC----------------------------------------------
Q 002021 765 LEKYLYSSNCILDIFQRLNIMIDVASALEYLHFG---------------------------------------------- 798 (979)
Q Consensus 765 L~~~l~~~~~~l~~~~~~~i~~~ia~~L~~LH~~---------------------------------------------- 798 (979)
+.+..... ......+..++++.++.||..
T Consensus 107 ~~~~~~~~-----~~~~~~~~~~l~~~L~~Lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 181 (272)
T 4gkh_A 107 AFQVLEEY-----PDSGENIVDALAVFLRRLHSIPVCNCPFNSDRVFRLAQAQSRMNNGLVDASDFDDERNGWPVEQVWK 181 (272)
T ss_dssp HHHHHHHC-----GGGHHHHHHHHHHHHHHHHTSCGGGCCBBCCHHHHHHHHHHHHHTTCCCGGGCCGGGTTCCHHHHHH
T ss_pred ccccccCC-----HHHHHHHHHHHHHHHHHhcCCCcccCCcCcccccchhhHHHHHHHhhhhhhhccccccchHHHHHHH
Confidence 76654321 223345677777777777711
Q ss_pred ---------CCCCeEecCCCCCCEEeCCCCcEEEEeeccccc
Q 002021 799 ---------YSAPVIHCDLKPSNVLLDDNMVAHLSDFSIAKM 831 (979)
Q Consensus 799 ---------~~~~i~H~Dik~~NIll~~~~~~kl~Dfg~~~~ 831 (979)
....++|+|+.+.||++++++.+-|+||+.+..
T Consensus 182 ~l~~~~~~~~~~~l~HGDl~~~Nil~~~~~~~~viDwe~a~~ 223 (272)
T 4gkh_A 182 EMHKLLPFSPDSVVTHGDFSLDNLIFDEGKLIGCIDVGRVGI 223 (272)
T ss_dssp HHHTTCCCCCCEEEECSCCCTTSEEEETTEEEEECCCTTCEE
T ss_pred HHHhcccccCCcEEEcCCCCCCeEEEECCeEEEEEECccccc
Confidence 012378999999999999887778999998754
No 423
>3ovc_A Hygromycin-B 4-O-kinase; aminoglycoside phosphotransferase, structural genomics, PSI- protein structure initiative; HET: HY0 PE4; 1.95A {Escherichia coli} PDB: 3tyk_A*
Probab=98.19 E-value=6.1e-06 Score=91.33 Aligned_cols=76 Identities=9% Similarity=0.115 Sum_probs=57.7
Q ss_pred CCCceeeeecceEEEEEEcCCCcEEEEEEeccccccchhcHHHHHHHHHhcCCCC--eeeEEEeeccC-CeeEEEEEecC
Q 002021 685 SENNLIGRGGFGSVYKASLGDGMEVAVKVFTSQCGRAFKSFDVECEIMKSIRHRN--LIKVISSCSNE-EFKALVLEYMP 761 (979)
Q Consensus 685 ~~~~~lG~G~~g~Vy~~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~h~n--iv~l~~~~~~~-~~~~lv~E~~~ 761 (979)
...+.++.|....+|+.+. +++.+++|..... ..+.+|+.+++.+.... +.++++++... +..++||||++
T Consensus 44 ~~i~~l~gG~~n~~y~v~~-~g~~~vlK~~~~~-----~~~~~E~~~l~~L~~~gvpvP~vl~~~~~~~g~~~lv~e~l~ 117 (362)
T 3ovc_A 44 SDLMQLSEGEESRAFSFDV-GGRGYVLRVNSCA-----DGFYKDRYVYRHFASAALPIPEVLDIGEFSESLTYCISRRAQ 117 (362)
T ss_dssp EEEEEEEECSSEEEEEEEE-TTEEEEEEEESCC-----HHHHHHHHHHHHHCCSSSCCCCEEEEEESSSSCEEEEEECCC
T ss_pred ceEEECCCCCcceEEEEEE-CCcEEEEEeCCch-----hhHHHHHHHHHHHHhcCCCCceEEEeccCCCCCeEEEEEecC
Confidence 3456789999999999976 5788999987432 35888999999986533 45666666554 67899999999
Q ss_pred CCccc
Q 002021 762 HGSLE 766 (979)
Q Consensus 762 ~g~L~ 766 (979)
|.++.
T Consensus 118 G~~l~ 122 (362)
T 3ovc_A 118 GVTLQ 122 (362)
T ss_dssp SEETT
T ss_pred CCCcc
Confidence 87664
No 424
>1pgv_A TMD-1, tropomodulin TMD-1; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics secsg; 1.80A {Caenorhabditis elegans} SCOP: c.10.1.1
Probab=97.89 E-value=1e-06 Score=86.88 Aligned_cols=121 Identities=17% Similarity=0.177 Sum_probs=74.4
Q ss_pred CCCCCcCCCCCCeeeccCC-ccccc----CCccccccCcccEEecccccccccC----CccccCCCCCcEEEccCCccCc
Q 002021 88 IPSQLGNLSSLQSLNLSFN-RLFGS----IPSAIFTTYTLKYVCLRGNQLSGTF----PSFISNKSSLQHLDLSSNALSG 158 (979)
Q Consensus 88 ~~~~l~~l~~L~~L~L~~n-~~~~~----~p~~~~~l~~L~~L~L~~n~l~~~~----p~~l~~l~~L~~L~Ls~N~l~~ 158 (979)
+...+.+-+.|++|+|++| ++... +-.++.....|+.|+|++|+|.... ...+..-+.|++|+|++|.|+.
T Consensus 33 l~~ll~~n~~L~~L~L~~nn~igd~ga~~la~aL~~N~~L~~L~L~~n~igd~ga~alA~aL~~N~tL~~L~L~~N~Ig~ 112 (197)
T 1pgv_A 33 INRLREDDTDLKEVNINNMKRVSKERIRSLIEAACNSKHIEKFSLANTAISDSEARGLIELIETSPSLRVLNVESNFLTP 112 (197)
T ss_dssp HHHHHTTCSSCCEEECTTCCSSCHHHHHHHHHHHTTCSCCCEEECTTSCCBHHHHTTHHHHHHHCSSCCEEECCSSBCCH
T ss_pred HHHHHhcCCCccEEECCCCCCCCHHHHHHHHHHHhhCCCcCEEEccCCCCChHHHHHHHHHHhcCCccCeEecCCCcCCH
Confidence 3344556678888888885 76532 4455666677888888888887533 3344456788888888888876
Q ss_pred hhhhhhhccCCcccCCCCccceeecccc---cccc----cccccccCCCCCCceecCCCee
Q 002021 159 EIRANICREIPREFGNLPELELMSLAAN---NLQG----KIPLKIGNLRNLEKLDIGDNKL 212 (979)
Q Consensus 159 ~~~~~~~~~ip~~l~~l~~L~~L~L~~N---~l~~----~~p~~~~~l~~L~~L~Ls~N~l 212 (979)
.+...++ +.+..-+.|++|+|++| .+.. .+...+..-+.|++|+++.|.+
T Consensus 113 ~Ga~ala----~aL~~N~tL~~L~L~n~~~~~ig~~g~~~ia~aL~~N~tL~~L~l~~~~~ 169 (197)
T 1pgv_A 113 ELLARLL----RSTLVTQSIVEFKADNQRQSVLGNQVEMDMMMAIEENESLLRVGISFASM 169 (197)
T ss_dssp HHHHHHH----HHTTTTCCCSEEECCCCSSCCCCHHHHHHHHHHHHHCSSCCEEECCCCCH
T ss_pred HHHHHHH----HHHhhCCceeEEECCCCcCcCcCHHHHHHHHHHHHhCCCcCeEeccCCCc
Confidence 6554333 34455566777777654 2332 2333444455666666665544
No 425
>3f7w_A Putative fructosamine-3-kinase; YP_290396.1, structural GENO joint center for structural genomics, JCSG, protein structu initiative, PSI-2; 1.85A {Thermobifida fusca YX}
Probab=97.82 E-value=6.1e-05 Score=80.54 Aligned_cols=79 Identities=15% Similarity=0.136 Sum_probs=58.1
Q ss_pred CCCCCceeeeecceEEEEEEcCCCcEEEEEEeccccccchhcHHHHHHHHHhcCC---CCeeeEEEeeccCCeeEEEEEe
Q 002021 683 GFSENNLIGRGGFGSVYKASLGDGMEVAVKVFTSQCGRAFKSFDVECEIMKSIRH---RNLIKVISSCSNEEFKALVLEY 759 (979)
Q Consensus 683 ~~~~~~~lG~G~~g~Vy~~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~h---~niv~l~~~~~~~~~~~lv~E~ 759 (979)
.+...+.+|.|..+.||+.+..||+.|.||+...........|..|++.|+.+.. -.+.+++++. ..++||||
T Consensus 16 ~v~~v~~~g~G~~~~vyrv~l~DG~~~~vK~~~~~~~~~~~~~~~Ea~~L~~L~~~~~vpvP~v~~~~----~~~lv~e~ 91 (288)
T 3f7w_A 16 EVAAVAERGHSHRWHLYRVELADGTPLFVKALPDDAPALDGLFRAEALGLDWLGRSFGSPVPQVAGWD----DRTLAMEW 91 (288)
T ss_dssp CEEEEEEEEEETTEEEEEEEETTSCEEEEEECCTTCCCCTTHHHHHHHHHHHHTCSTTCCSCCEEEEE----TTEEEEEC
T ss_pred CeEEEEecCCCCCeEEEEEEECCCCEEEEEEeCCCCcchhhHHHHHHHHHHHHHhhCCCCcceEEecc----CceEEEEe
Confidence 3444678999999999999999999999998765444444568899999998842 2344455442 34789999
Q ss_pred cCCCcc
Q 002021 760 MPHGSL 765 (979)
Q Consensus 760 ~~~g~L 765 (979)
++++..
T Consensus 92 l~~~~~ 97 (288)
T 3f7w_A 92 VDERPP 97 (288)
T ss_dssp CCCCCC
T ss_pred ecccCC
Confidence 987644
No 426
>2olc_A MTR kinase, methylthioribose kinase; kinase ADP-2HO complex, transferase; HET: CPS ADP; 2.00A {Bacillus subtilis} SCOP: d.144.1.6 PDB: 2pu8_A* 2pui_A* 2pul_A* 2pun_A* 2pup_A*
Probab=97.81 E-value=3.8e-05 Score=86.39 Aligned_cols=75 Identities=17% Similarity=0.221 Sum_probs=49.9
Q ss_pred CceeeeecceEEEEEEcC-CCcEEEEEEeccccc-------cchhcHHHHHHHHHhcCC--CCee-eEEEeeccCCeeEE
Q 002021 687 NNLIGRGGFGSVYKASLG-DGMEVAVKVFTSQCG-------RAFKSFDVECEIMKSIRH--RNLI-KVISSCSNEEFKAL 755 (979)
Q Consensus 687 ~~~lG~G~~g~Vy~~~~~-~~~~vAvK~~~~~~~-------~~~~~~~~E~~~l~~l~h--~niv-~l~~~~~~~~~~~l 755 (979)
.+.+|.|.++.||+++.. +++.|+||....... ...+.+..|+++++.+.. |..+ +++.+ +++..++
T Consensus 35 ~~~lg~G~~n~vyrv~~~~~~~~~vvK~~~~~~r~~~~~~~~~~~r~~~E~~~L~~l~~~~~~~vP~~~~~--d~~~~~l 112 (397)
T 2olc_A 35 CQEIGDGNLNYVFHIYDQEHDRALIIKQAVPYAKVVGESWPLTIDRARIESSALIRQGEHVPHLVPRVFYS--DTEMAVT 112 (397)
T ss_dssp EEECCSSSSEEEEEEEC----CEEEEEEECCC-------CCCCTTHHHHHHHHHHHHHTTCGGGSCCEEEE--ETTTTEE
T ss_pred EEECCCCceEEEEEEEECCCCcEEEEEecchhhcccCCCCcCcHHHHHHHHHHHHHhhhhCCCCcCeEEEE--cCCccEE
Confidence 457899999999999653 468899997653211 123456789999998742 4444 45544 3445689
Q ss_pred EEEecCCC
Q 002021 756 VLEYMPHG 763 (979)
Q Consensus 756 v~E~~~~g 763 (979)
||||+++.
T Consensus 113 vmE~l~g~ 120 (397)
T 2olc_A 113 VMEDLSHL 120 (397)
T ss_dssp EECCCTTS
T ss_pred EEEeCCCc
Confidence 99999764
No 427
>2q83_A YTAA protein; 2635576, structural genomics, joint center for structu genomics, JCSG, protein structure initiative, PSI-2, transf; HET: ADN CIT UNL; 2.50A {Bacillus subtilis}
Probab=97.71 E-value=4.4e-05 Score=83.93 Aligned_cols=138 Identities=15% Similarity=0.143 Sum_probs=80.6
Q ss_pred ceeeeecceEEEEEEcCCCcEEEEEEeccccccchhcHHHHHHHHHhcCC--CCeeeEEEe------eccCCeeEEEEEe
Q 002021 688 NLIGRGGFGSVYKASLGDGMEVAVKVFTSQCGRAFKSFDVECEIMKSIRH--RNLIKVISS------CSNEEFKALVLEY 759 (979)
Q Consensus 688 ~~lG~G~~g~Vy~~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~h--~niv~l~~~------~~~~~~~~lv~E~ 759 (979)
+.|+.|..+.||+....+| .+++|+.... ......|+++++.+.. -.+.+++.. ....+..++||||
T Consensus 38 ~~l~gG~~n~~~~v~~~~~-~~vlk~~~~~----~~~~~~e~~~l~~L~~~g~~vp~~~~~~~g~~~~~~~~~~~~l~~~ 112 (346)
T 2q83_A 38 DVIQGNQMALVWKVHTDSG-AVCLKRIHRP----EKKALFSIFAQDYLAKKGMNVPGILPNKKGSLYSKHGSFLFVVYDW 112 (346)
T ss_dssp EECC----CEEEEEEETTE-EEEEEEECSC----HHHHHHHHHHHHHHHHHTCSSCCBCCCTTSCSCEEETTEEEEEEEC
T ss_pred eeccccccCcEEEEEeCCC-CEEEEecCCC----HHHHHHHHHHHHHHHHcCCCCCceeecCCCCEEEEECCEEEEEEEe
Confidence 4566678999999977555 4899988642 2334456666666531 123333321 1235678899999
Q ss_pred cCCCccce--------------eeccC--CC-----------CCCHHHH-------------------------------
Q 002021 760 MPHGSLEK--------------YLYSS--NC-----------ILDIFQR------------------------------- 781 (979)
Q Consensus 760 ~~~g~L~~--------------~l~~~--~~-----------~l~~~~~------------------------------- 781 (979)
++|.++.. .++.. .. ...|...
T Consensus 113 i~G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 192 (346)
T 2q83_A 113 IEGRPFELTVKQDLEFIMKGLADFHTASVGYQPPNGVPIFTKLGRWPNHYTKRCKQMETWKLMAEAEKEDPFSQLYLQEI 192 (346)
T ss_dssp CCCBCCCTTSHHHHHHHHHHHHHHHHHHTTCCCCTTCCCCBCTTCHHHHHHHHHHHHHHHHHHHHHCSSCHHHHHHHHHH
T ss_pred ecCccCCCCCHHHHHHHHHHHHHHHHhCCCCCCCccchhcccccchHHHHHHHHHHHHHHHHHHHhccCCcHHHHHHHHH
Confidence 99876531 01110 00 0122110
Q ss_pred HHHHHHHHHHHHHHhc----------CCCCCeEecCCCCCCEEeCCCCcEEEEeecccc
Q 002021 782 LNIMIDVASALEYLHF----------GYSAPVIHCDLKPSNVLLDDNMVAHLSDFSIAK 830 (979)
Q Consensus 782 ~~i~~~ia~~L~~LH~----------~~~~~i~H~Dik~~NIll~~~~~~kl~Dfg~~~ 830 (979)
..+..++..++++|+. .....++|+|+++.||+++.++.+.++||+.+.
T Consensus 193 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~HgD~~~~Nil~~~~~~~~lIDfe~a~ 251 (346)
T 2q83_A 193 DGFIEDGLRIKDRLLQSTYVPWTEQLKKSPNLCHQDYGTGNTLLGENEQIWVIDLDTVS 251 (346)
T ss_dssp HHHHHHHHHHHHHHHHTTHHHHHHHHHHSCCEECSSCSTTSEEECGGGCEEECCCTTCE
T ss_pred HHHHHHHHHHHHHHHhchHHHHHHhccccCceecCCCCcccEEEeCCCcEEEEehhhcc
Confidence 0111223445666652 025789999999999999888899999999764
No 428
>3e4g_A ATP synthase subunit S, mitochondrial; leucine-rich repeat, CF0, hydrogen ION transport, inner membrane, ION transport, membrane, mitochondrion; 0.96A {Bos taurus} PDB: 3e3z_A 3dze_A 3e2j_A
Probab=97.69 E-value=2.4e-05 Score=75.60 Aligned_cols=82 Identities=13% Similarity=0.133 Sum_probs=41.9
Q ss_pred cccEEEccCccccCCCCccccCCCcccEEEecCCC-CCchhHHhhhcC----CCCcEEEecCcc-cCCCccccccCCCCC
Q 002021 353 SLEEFKMSNCNISGGIPEEISNLTNLRTIYLGGNK-LNGSILITLSKL----QKLQDLGLKDNK-LEGSIPYDICNLAEL 426 (979)
Q Consensus 353 ~L~~L~L~~n~i~~~~p~~l~~l~~L~~L~L~~N~-l~~~~~~~l~~l----~~L~~L~L~~N~-l~~~~p~~~~~l~~L 426 (979)
.|++|++++|.|+..--..+..+++|++|+|++|. +++.....++.+ ++|++|++++|. |+..--..+..+++|
T Consensus 62 ~L~~LDLs~~~Itd~GL~~L~~~~~L~~L~L~~C~~ItD~gL~~L~~~~~~~~~L~~L~Ls~C~~ITD~Gl~~L~~~~~L 141 (176)
T 3e4g_A 62 KIQAIDATDSCIMSIGFDHMEGLQYVEKIRLCKCHYIEDGCLERLSQLENLQKSMLEMEIISCGNVTDKGIIALHHFRNL 141 (176)
T ss_dssp CEEEEEEESCCCCGGGGGGGTTCSCCCEEEEESCTTCCHHHHHHHHTCHHHHHHCCEEEEESCTTCCHHHHHHGGGCTTC
T ss_pred eEeEEeCcCCCccHHHHHHhcCCCCCCEEEeCCCCccCHHHHHHHHhcccccCCCCEEEcCCCCcCCHHHHHHHhcCCCC
Confidence 35555555555554444455666666666666663 555555555543 245555555553 443222233344444
Q ss_pred ceEecCCC
Q 002021 427 YRLDLDGN 434 (979)
Q Consensus 427 ~~L~Ls~N 434 (979)
+.|+++++
T Consensus 142 ~~L~L~~c 149 (176)
T 3e4g_A 142 KYLFLSDL 149 (176)
T ss_dssp CEEEEESC
T ss_pred CEEECCCC
Confidence 44444443
No 429
>3jr1_A Putative fructosamine-3-kinase; YP_719053.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 2.32A {Haemophilus somnus 129PT}
Probab=97.62 E-value=0.00026 Score=76.11 Aligned_cols=137 Identities=13% Similarity=0.097 Sum_probs=92.2
Q ss_pred CCceeeeecceEEEEEEcCCCcEEEEEEeccccccchhcHHHHHHHHHhcC---CCCeeeEEEeeccCCeeEEEEEecCC
Q 002021 686 ENNLIGRGGFGSVYKASLGDGMEVAVKVFTSQCGRAFKSFDVECEIMKSIR---HRNLIKVISSCSNEEFKALVLEYMPH 762 (979)
Q Consensus 686 ~~~~lG~G~~g~Vy~~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~---h~niv~l~~~~~~~~~~~lv~E~~~~ 762 (979)
..+.|+.|....+|+.+. ++..++||+.... ....+..|++.|+.+. ...+.+++++....+..++||||+++
T Consensus 40 ~~~~l~gG~~n~~y~v~~-~~~~~vlK~~~~~---~~~~~~~E~~~L~~L~~~~~v~VP~vl~~~~~~g~~~lvme~l~G 115 (312)
T 3jr1_A 40 HKEKLYSGEMNEIWLIND-EVQTVFVKINERS---YRSMFRAEADQLALLAKTNSINVPLVYGIGNSQGHSFLLLEALNK 115 (312)
T ss_dssp EEEEECCSSSSEEEEEES-SSCEEEEEEEEGG---GHHHHHHHHHHHHHHHHTTSSBCCCEEEEEECSSEEEEEEECCCC
T ss_pred eeEEeCCccceeeeEEEE-CCCeEEEEeCCcc---cHHHHHHHHHHHHHHHhhCCCCcceEEEEeecCCceEEEEEeccC
Confidence 346789999999999986 4678889987532 2456888999999884 35678888888878889999999999
Q ss_pred Ccccee-----------eccCCC---------------------CCCHHHHH---HHH----------------HHHHHH
Q 002021 763 GSLEKY-----------LYSSNC---------------------ILDIFQRL---NIM----------------IDVASA 791 (979)
Q Consensus 763 g~L~~~-----------l~~~~~---------------------~l~~~~~~---~i~----------------~~ia~~ 791 (979)
..+..- ++.... .-+|.+.. ++. .+++..
T Consensus 116 ~~~~~~~~~~lG~~LA~LH~~~~~~~fG~~~~~~~G~~~q~n~w~~~W~~f~~~~Rl~~~l~~a~~~g~~~~~~~~l~~~ 195 (312)
T 3jr1_A 116 SKNKQSSFTIFAEKIAQLHQIQGPDKYGLDFDTWLGPIYQPNDWQTSWAKFFSENRIGWQLQICKEKGLIFGNIDLIVQI 195 (312)
T ss_dssp CCCCTTHHHHHHHHHHHHHHCCCCSSBBCSSCEEETTEEECCCCBSCHHHHHHHHTHHHHHHHHHHHTCCCSCHHHHHHH
T ss_pred CCCCchhHHHHHHHHHHHHcCCCCCCCCCCCCCCCCCcCCCCCCcCCHHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHH
Confidence 765321 111100 11343221 111 111111
Q ss_pred -HHHHh-cCCCCCeEecCCCCCCEEeCCCCcEEEEeec
Q 002021 792 -LEYLH-FGYSAPVIHCDLKPSNVLLDDNMVAHLSDFS 827 (979)
Q Consensus 792 -L~~LH-~~~~~~i~H~Dik~~NIll~~~~~~kl~Dfg 827 (979)
.+.|. ......++|+|+.+.|++++.++ +.++||.
T Consensus 196 l~~~L~~~~~~~~l~HgD~~~~N~l~~~~~-~~~iD~~ 232 (312)
T 3jr1_A 196 VADTLSKHNPKPSILHGNLWIENCIQVDDK-IFVCNPA 232 (312)
T ss_dssp HHHHHTTCCCCCEEECSSCSGGGEEEETTE-EEECSCC
T ss_pred HHHHhccCCCCceeEeCCCCcCcEeecCCC-eEEEcCc
Confidence 22342 12356799999999999999887 8899974
No 430
>3e4g_A ATP synthase subunit S, mitochondrial; leucine-rich repeat, CF0, hydrogen ION transport, inner membrane, ION transport, membrane, mitochondrion; 0.96A {Bos taurus} PDB: 3e3z_A 3dze_A 3e2j_A
Probab=97.62 E-value=2.6e-05 Score=75.38 Aligned_cols=93 Identities=10% Similarity=0.115 Sum_probs=68.1
Q ss_pred CccccCCCcccEEEecCCCCCchhHHhhhcCCCCcEEEecCcc-cCCCccccccCC----CCCceEecCCCc-ccccCCc
Q 002021 369 PEEISNLTNLRTIYLGGNKLNGSILITLSKLQKLQDLGLKDNK-LEGSIPYDICNL----AELYRLDLDGNK-LSGSIPA 442 (979)
Q Consensus 369 p~~l~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~-l~~~~p~~~~~l----~~L~~L~Ls~N~-l~~~~~~ 442 (979)
|.....-.+|++||++++.++......+..+++|+.|+|++|. |++.--..+..+ ++|++|+|++|. |+...-.
T Consensus 54 P~~~~~~~~L~~LDLs~~~Itd~GL~~L~~~~~L~~L~L~~C~~ItD~gL~~L~~~~~~~~~L~~L~Ls~C~~ITD~Gl~ 133 (176)
T 3e4g_A 54 PTGPLDKYKIQAIDATDSCIMSIGFDHMEGLQYVEKIRLCKCHYIEDGCLERLSQLENLQKSMLEMEIISCGNVTDKGII 133 (176)
T ss_dssp CCCSTTCCCEEEEEEESCCCCGGGGGGGTTCSCCCEEEEESCTTCCHHHHHHHHTCHHHHHHCCEEEEESCTTCCHHHHH
T ss_pred CcccCCCceEeEEeCcCCCccHHHHHHhcCCCCCCEEEeCCCCccCHHHHHHHHhcccccCCCCEEEcCCCCcCCHHHHH
Confidence 4433334579999999999998888888999999999999985 664444445554 368888888874 7765555
Q ss_pred cccCCCcCceEecCCCc-cc
Q 002021 443 CFSNLTSLRIVSLGSNE-LT 461 (979)
Q Consensus 443 ~~~~l~~L~~L~L~~N~-l~ 461 (979)
.+..+++|++|+++++. ++
T Consensus 134 ~L~~~~~L~~L~L~~c~~It 153 (176)
T 3e4g_A 134 ALHHFRNLKYLFLSDLPGVK 153 (176)
T ss_dssp HGGGCTTCCEEEEESCTTCC
T ss_pred HHhcCCCCCEEECCCCCCCC
Confidence 66777788888887763 44
No 431
>1pgv_A TMD-1, tropomodulin TMD-1; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics secsg; 1.80A {Caenorhabditis elegans} SCOP: c.10.1.1
Probab=97.51 E-value=2.5e-05 Score=76.99 Aligned_cols=71 Identities=18% Similarity=0.204 Sum_probs=34.2
Q ss_pred ccCCCCCcEEEccCC-ccCchhhhhhhccCCcccCCCCccceeeccccccccc----ccccccCCCCCCceecCCCeeee
Q 002021 140 ISNKSSLQHLDLSSN-ALSGEIRANICREIPREFGNLPELELMSLAANNLQGK----IPLKIGNLRNLEKLDIGDNKLVG 214 (979)
Q Consensus 140 l~~l~~L~~L~Ls~N-~l~~~~~~~~~~~ip~~l~~l~~L~~L~L~~N~l~~~----~p~~~~~l~~L~~L~Ls~N~l~~ 214 (979)
+.+-+.|++|+|++| .|...+... +-+.+..-+.|+.|+|++|+|... +.+.+..-+.|++|+|++|+|..
T Consensus 37 l~~n~~L~~L~L~~nn~igd~ga~~----la~aL~~N~~L~~L~L~~n~igd~ga~alA~aL~~N~tL~~L~L~~N~Ig~ 112 (197)
T 1pgv_A 37 REDDTDLKEVNINNMKRVSKERIRS----LIEAACNSKHIEKFSLANTAISDSEARGLIELIETSPSLRVLNVESNFLTP 112 (197)
T ss_dssp HTTCSSCCEEECTTCCSSCHHHHHH----HHHHHTTCSCCCEEECTTSCCBHHHHTTHHHHHHHCSSCCEEECCSSBCCH
T ss_pred HhcCCCccEEECCCCCCCCHHHHHH----HHHHHhhCCCcCEEEccCCCCChHHHHHHHHHHhcCCccCeEecCCCcCCH
Confidence 344456666666664 555433322 223334445555555555555422 22223334555555555555553
No 432
>2ppq_A HSK, HK, homoserine kinase; structural genomics, MCSG, PSI-2, protein structure initiative; 2.00A {Agrobacterium tumefaciens str} SCOP: d.144.1.6
Probab=97.28 E-value=0.00068 Score=73.57 Aligned_cols=156 Identities=15% Similarity=0.143 Sum_probs=87.8
Q ss_pred ccHHHHHHhhCCCCC-----CceeeeecceEEEEEEcCCCcEEEEEEeccccccchhcHHHHHHHHHhcCCCC--eeeEE
Q 002021 672 FSYLELCRATDGFSE-----NNLIGRGGFGSVYKASLGDGMEVAVKVFTSQCGRAFKSFDVECEIMKSIRHRN--LIKVI 744 (979)
Q Consensus 672 ~~~~~~~~~~~~~~~-----~~~lG~G~~g~Vy~~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~h~n--iv~l~ 744 (979)
.+.+++......|.. .+.|+.|....+|+.+..+| .+++|+.... ...+.+..|+++++.++... +.+++
T Consensus 7 ~~~~~l~~~l~~~~~~~~~~~~~i~~G~~n~~~~v~~~~g-~~vlk~~~~~--~~~~~l~~e~~~l~~L~~~g~~vP~~~ 83 (322)
T 2ppq_A 7 ITEDELRNFLTQYDVGSLTSYKGIAEGVENSNFLLHTTKD-PLILTLYEKR--VEKNDLPFFLGLMQHLAAKGLSCPLPL 83 (322)
T ss_dssp CCHHHHHHHHTTBCCCCEEEEEEECC---EEEEEEEESSC-CEEEEEECC-----CCHHHHHHHHHHHHHHTTCCCCCBC
T ss_pred CCHHHHHHHHHhCCCCcceEeeccCCCcccceEEEEeCCc-cEEEEEeCCC--CCHHHHHHHHHHHHHHHHCCCCCCccc
Confidence 344555555555554 24566788899999977656 5889987652 22345677888888774222 22333
Q ss_pred Eee------ccCCeeEEEEEecCCCcccee--------------eccC----CC----CC---CHHHHHH----------
Q 002021 745 SSC------SNEEFKALVLEYMPHGSLEKY--------------LYSS----NC----IL---DIFQRLN---------- 783 (979)
Q Consensus 745 ~~~------~~~~~~~lv~E~~~~g~L~~~--------------l~~~----~~----~l---~~~~~~~---------- 783 (979)
... ...+..+++|||++|..+... ++.. .. .. .|.....
T Consensus 84 ~~~~g~~~~~~~g~~~~l~~~l~G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~ 163 (322)
T 2ppq_A 84 PRKDGELLGELSGRPAALISFLEGMWLRKPEAKHCREVGKALAAMHLASEGFEIKRPNALSVDGWKVLWDKSEERADEVE 163 (322)
T ss_dssp CBTTCCSCEEETTEEEEEEECCCCBCCSSCCHHHHHHHHHHHHHHHHHTTTCCCCCBCTTSHHHHHHHHHHHGGGGGGTS
T ss_pred CCCCCCEEEEECCEEEEEEEeCCCcCCCCCCHHHHHHHHHHHHHHHHHhccCCCcccCccChHHHHHHHHHHHHHHHhhh
Confidence 211 123567899999998765321 1110 00 01 1211100
Q ss_pred --HHHHHHHHHHHHhc----CCCCCeEecCCCCCCEEeCCCCcEEEEeecccc
Q 002021 784 --IMIDVASALEYLHF----GYSAPVIHCDLKPSNVLLDDNMVAHLSDFSIAK 830 (979)
Q Consensus 784 --i~~~ia~~L~~LH~----~~~~~i~H~Dik~~NIll~~~~~~kl~Dfg~~~ 830 (979)
+...+.+.+++++. ....+++|+|+.+.||+++++..+.++||+.+.
T Consensus 164 ~~l~~~l~~~~~~l~~~~~~~~~~~liHgDl~~~Nil~~~~~~~~lIDf~~a~ 216 (322)
T 2ppq_A 164 KGLREEIRPEIDYLAAHWPKDLPAGVIHADLFQDNVFFLGDELSGLIDFYFAC 216 (322)
T ss_dssp TTHHHHHHHHHHHHHHHCCCSSCEEEECSCCCGGGEEEETTEEEEECCCTTCE
T ss_pred hhhHHHHHHHHHHHHhhCcccCCcccCCCCCCccCEEEeCCceEEEecchhcc
Confidence 00113344555542 124579999999999999987666899998765
No 433
>3dxq_A Choline/ethanolamine kinase family protein; NP_106042.1, STR genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE; 2.55A {Mesorhizobium loti}
Probab=97.28 E-value=0.00084 Score=72.09 Aligned_cols=131 Identities=15% Similarity=0.157 Sum_probs=80.2
Q ss_pred CCCCceeeeecceEEEEEEcCCCcEEEEEEeccccccchhcHHHHHHHHHhcCCCCe-eeEEEeeccCCeeEEEEEec-C
Q 002021 684 FSENNLIGRGGFGSVYKASLGDGMEVAVKVFTSQCGRAFKSFDVECEIMKSIRHRNL-IKVISSCSNEEFKALVLEYM-P 761 (979)
Q Consensus 684 ~~~~~~lG~G~~g~Vy~~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~h~ni-v~l~~~~~~~~~~~lv~E~~-~ 761 (979)
+.-.+.|+.|....+|+. ..+++|+...... ......+|+.+++.+...++ .++++++. +.-++|+||+ +
T Consensus 20 ~~~i~~l~gG~tN~~~~~-----~~~vlR~~~~~~~-~~~~r~~E~~~l~~l~~~g~~P~~~~~~~--~~~~~v~e~i~~ 91 (301)
T 3dxq_A 20 YTGPLERLGGLTNLVFRA-----GDLCLRIPGKGTE-EYINRANEAVAAREAAKAGVSPEVLHVDP--ATGVMVTRYIAG 91 (301)
T ss_dssp CCSCEEEESCSSEEEEEE-----TTEEEEEECC-----CCCHHHHHHHHHHHHHTTSSCCEEEECT--TTCCEEEECCTT
T ss_pred ccceeEcCCcccccccee-----eeEEEECCCCCcc-ceeCHHHHHHHHHHHHHcCCCCceEEEEC--CCCEEEEeecCC
Confidence 334678999999999998 4588898764322 22345678888888753333 45555543 3346899999 6
Q ss_pred CCccceeeccCCCCCCHHHHHHHHHHHHHHHHHHhc--------------------------------------------
Q 002021 762 HGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHF-------------------------------------------- 797 (979)
Q Consensus 762 ~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~L~~LH~-------------------------------------------- 797 (979)
|.++...-.. .+..++.++++.|+.+|.
T Consensus 92 g~~l~~~~~~--------~~~~~~~~~~~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~ 163 (301)
T 3dxq_A 92 AQTMSPEKFK--------TRPGSPARAGEAFRKLHGSGAVFPFRFELFAMIDDYLKVLSTKNVTLPAGYHDVVREAGGVR 163 (301)
T ss_dssp CEECCHHHHH--------HSTTHHHHHHHHHHHHHTSCCCCSSBCCHHHHHHHHHHHHC--CCCCCTTHHHHHHHHHHHH
T ss_pred CccCCHhhHh--------hhHHHHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHHHHHHhhcCCCchhhHHHHHHHHHHHH
Confidence 6555320000 000122333333333331
Q ss_pred ------CCCCCeEecCCCCCCEEeCCCCcEEEEeeccccc
Q 002021 798 ------GYSAPVIHCDLKPSNVLLDDNMVAHLSDFSIAKM 831 (979)
Q Consensus 798 ------~~~~~i~H~Dik~~NIll~~~~~~kl~Dfg~~~~ 831 (979)
.....++|+|+.+.||+ .+++.+.++||..+..
T Consensus 164 ~~l~~~~~~~~l~HgDl~~~Nil-~~~~~~~lID~e~a~~ 202 (301)
T 3dxq_A 164 SALAAHPLPLAACHCDPLCENFL-DTGERMWIVDWEYSGM 202 (301)
T ss_dssp HHHHSSCCCCEEECSCCCGGGEE-ECSSCEEECCCTTCEE
T ss_pred HHHHhcCCCceeeccCCCcCCEE-ECCCCEEEEecccccC
Confidence 11345899999999999 6667789999998764
No 434
>3feg_A Choline/ethanolamine kinase; non-protein kinase, choline kinase, structural genomics CONS SGC, hemicholinium-3, phosphorylation; HET: HC7 ADP AMP; 1.30A {Homo sapiens} PDB: 3lq3_A* 2ig7_A*
Probab=97.07 E-value=0.0013 Score=72.60 Aligned_cols=140 Identities=14% Similarity=0.154 Sum_probs=83.9
Q ss_pred CceeeeecceEEEEEEcC--------CCcEEEEEEeccccccchhcHHHHHHHHHhcC-CCCeeeEEEeeccCCeeEEEE
Q 002021 687 NNLIGRGGFGSVYKASLG--------DGMEVAVKVFTSQCGRAFKSFDVECEIMKSIR-HRNLIKVISSCSNEEFKALVL 757 (979)
Q Consensus 687 ~~~lG~G~~g~Vy~~~~~--------~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~~~~lv~ 757 (979)
.+.+..|-...+|+.+.. +++.+++|+.... ........+|+++++.+. +.-..++++++.+ .+||
T Consensus 55 v~~lsGG~TN~~y~v~~~~~~~~~~~~~~~~vlR~~g~~-~~~~~~~~rE~~vl~~L~~~gv~P~ll~~~~~----g~v~ 129 (379)
T 3feg_A 55 VYPVSGGLSNLLFRCSLPDHLPSVGEEPREVLLRLYGAI-LQGVDSLVLESVMFAILAERSLGPQLYGVFPE----GRLE 129 (379)
T ss_dssp CEEC-----CCEEEEECCTTSCCCSSCCSEEEEEECC----CCHHHHHHHHHHHHHHHHTTSSCCEEEEETT----EEEE
T ss_pred EEEcCCcccccEEEEEeCCCccccCCCCCeEEEEECCCc-cchHHHHHHHHHHHHHHHhcCCCCeEEEEcCC----ccEE
Confidence 356777889999999764 3578999986332 223455678999998885 3333566766654 2899
Q ss_pred EecCCCcccee-e----------------ccC----CCCCC--HHHHHHHHHHHHH-------------------HHHHH
Q 002021 758 EYMPHGSLEKY-L----------------YSS----NCILD--IFQRLNIMIDVAS-------------------ALEYL 795 (979)
Q Consensus 758 E~~~~g~L~~~-l----------------~~~----~~~l~--~~~~~~i~~~ia~-------------------~L~~L 795 (979)
||++|.++..- + +.. ..... +.++.++..++.. .++.|
T Consensus 130 e~i~G~~l~~~~l~~p~~~~~ia~~La~LH~~~~~~~~~~~~l~~~i~~w~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L 209 (379)
T 3feg_A 130 QYIPSRPLKTQELREPVLSAAIATKMAQFHGMEMPFTKEPHWLFGTMERYLKQIQDLPPTGLPEMNLLEMYSLKDEMGNL 209 (379)
T ss_dssp ECCSEEECCGGGGGCHHHHHHHHHHHHHHHTCCCSSCCSCCHHHHHHHHHHHHHHHCCCCSCCSCCHHHHTTHHHHHHHH
T ss_pred EEecCccCChhHhCCHHHHHHHHHHHHHHhCCCCCCCCCcccHHHHHHHHHHHHHhccCcccchhhhhhhHHHHHHHHHH
Confidence 99998766421 1 111 11122 3444444443322 12222
Q ss_pred h----c-CCCCCeEecCCCCCCEEeCCC----CcEEEEeeccccc
Q 002021 796 H----F-GYSAPVIHCDLKPSNVLLDDN----MVAHLSDFSIAKM 831 (979)
Q Consensus 796 H----~-~~~~~i~H~Dik~~NIll~~~----~~~kl~Dfg~~~~ 831 (979)
. . .....++|+|+.+.||+++.+ +.+.++||..+..
T Consensus 210 ~~~L~~~~~~~~~~H~D~~~~Nil~~~~~~~~~~~~~IDwE~a~~ 254 (379)
T 3feg_A 210 RKLLESTPSPVVFCHNDIQEGNILLLSEPENADSLMLVDFEYSSY 254 (379)
T ss_dssp HHHHHTSCCCEEEECSCCCGGGEEEESCC---CCEEECCCTTCEE
T ss_pred HHHHhhcCCCcEEEcCCCCCCeEEEcCCCCccCcEEEEecccCCc
Confidence 2 1 123578999999999999876 7899999988753
No 435
>2pyw_A Uncharacterized protein; 5-methylthioribose kinase, plant methionine recycling, refol transferase; HET: SR1 ADP; 1.90A {Arabidopsis thaliana}
Probab=97.02 E-value=0.0012 Score=74.70 Aligned_cols=79 Identities=13% Similarity=0.106 Sum_probs=47.6
Q ss_pred CCCeEecCCCCCCEEeCCCCcEEEEeeccccccCCC-CCcceecccccCCCCCCccccCCC---CCCCchhHHHHHHHHH
Q 002021 800 SAPVIHCDLKPSNVLLDDNMVAHLSDFSIAKMLTGE-DQSMIQTQTLATIGYMAPEYGREG---RVSANGDVYSFGIMLM 875 (979)
Q Consensus 800 ~~~i~H~Dik~~NIll~~~~~~kl~Dfg~~~~~~~~-~~~~~~~~~~gt~~y~aPE~~~~~---~~~~~~DvwslG~il~ 875 (979)
...++|+|+++.||+++.++ ++++||+.+..-.+. +-...... -...|.+|+..... ......++.+....+|
T Consensus 231 ~~~liHGDl~~~Nil~~~~~-~~lID~e~a~~G~p~~Dla~~l~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 307 (420)
T 2pyw_A 231 AQALIHGDLHTGSVMVTQDS-TQVIDPEFSFYGPMGFDIGAYLGN--LILAFFAQDGHATQENDRKEYKQWILRTIEQTW 307 (420)
T ss_dssp CCEEECSCCSGGGEEECSSC-EEECCCTTCEEECHHHHHHHHHHH--HHHHHHHGGGGCCSSCCSHHHHHHHHHHHHHHH
T ss_pred CCeEEecCCCCCcEEEeCCC-CEEEeCcccccCchHHHHHHHHHH--HHHHHHhcccccccccchHHHHHHHHHHHHHHH
Confidence 77899999999999999876 999999988753211 00000000 01235555544211 1112345567777888
Q ss_pred HHHcCC
Q 002021 876 ETFTGK 881 (979)
Q Consensus 876 el~tg~ 881 (979)
+.+++.
T Consensus 308 ~~y~~~ 313 (420)
T 2pyw_A 308 NLFNKR 313 (420)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 777653
No 436
>3csv_A Aminoglycoside phosphotransferase; YP_614837.1, phosphotransferase enzyme family, structural genomics, JOIN for structural genomics, JCSG; HET: MSE; 2.15A {Silicibacter SP}
Probab=96.98 E-value=0.0018 Score=70.64 Aligned_cols=139 Identities=10% Similarity=0.066 Sum_probs=74.5
Q ss_pred ceeeeecceE-EEEEEcCCCcEEEEEEeccccccchhcHHHHHHHHHhcCCC--CeeeEEEeeccCCeeEEEEEecCCCc
Q 002021 688 NLIGRGGFGS-VYKASLGDGMEVAVKVFTSQCGRAFKSFDVECEIMKSIRHR--NLIKVISSCSNEEFKALVLEYMPHGS 764 (979)
Q Consensus 688 ~~lG~G~~g~-Vy~~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~h~--niv~l~~~~~~~~~~~lv~E~~~~g~ 764 (979)
+.|+.|+... +|+.+..+|..+++|...... .+.+..|+++++.+... .+.+++.+..+.+ ++|||++.+.+
T Consensus 24 ~~l~gg~s~~~~~r~~~~~~~~~vlk~~~~~~---~~~~~~e~~~l~~L~~~g~~vP~v~~~d~~~g--~ll~e~l~~~~ 98 (333)
T 3csv_A 24 TPLAGDASSRRYQRLRSPTGAKAVLMDWSPEE---GGDTQPFVDLAQYLRNLDISAPEIYAEEHARG--LLLIEDLGDAL 98 (333)
T ss_dssp CC--------CCEEEECTTCCEEEEEECCTTT---TCCSHHHHHHHHHHHHTTCBCCCEEEEETTTT--EEEECCCCSCB
T ss_pred eECCCCCCCceEEEEEcCCCCeEEEEECCCCC---CccccHHHHHHHHHHhCCCCCCceeeecCCCC--EEEEeeCCCcc
Confidence 4565565554 778766446777787654321 14456788888877422 3455666644443 68999997755
Q ss_pred cceeeccC-------------------------CCCCCHHHHH-------H-------------HHHHHHHHHHHHh---
Q 002021 765 LEKYLYSS-------------------------NCILDIFQRL-------N-------------IMIDVASALEYLH--- 796 (979)
Q Consensus 765 L~~~l~~~-------------------------~~~l~~~~~~-------~-------------i~~~ia~~L~~LH--- 796 (979)
+.+++... -..++..... . ....+...++.+.
T Consensus 99 l~~~l~~~~~~~~~~~~~~~~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~l~~~~ 178 (333)
T 3csv_A 99 FTEVINNDPAQEMPLYRAAVDLLIHLHDAQTPELARLDPETLSEMTRLAFSEYRYAILGDAAEDNRKRFEHRFAQILSAQ 178 (333)
T ss_dssp HHHHHHHCGGGHHHHHHHHHHHHHHHHTSCCCCCCBCCHHHHHHTTTHHHHTHHHHHHSSCCHHHHHHHHHHHHHHHHHH
T ss_pred hHHHhcCCCccHHHHHHHHHHHHHHHhcCCCccCCccCHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHhc
Confidence 54332110 0011111100 0 0001111222221
Q ss_pred cCCCCCeEecCCCCCCEEeCCC----CcEEEEeeccccc
Q 002021 797 FGYSAPVIHCDLKPSNVLLDDN----MVAHLSDFSIAKM 831 (979)
Q Consensus 797 ~~~~~~i~H~Dik~~NIll~~~----~~~kl~Dfg~~~~ 831 (979)
......++|||+.+.||+++.+ +.+.++||+.+..
T Consensus 179 ~~~~~~lvHgD~~~~Nil~~~~~~~~~~~~lIDf~~a~~ 217 (333)
T 3csv_A 179 LEGDMVFVHRDFHAQNLLWLPEREGLARVGVIDFQDAKL 217 (333)
T ss_dssp CCSCCEEECSCCSGGGEEECTTSCGGGGEEECCCTTCEE
T ss_pred ccCCCeeEeCCcCcccEEeccCcCCCCCeEEEeCCCcCc
Confidence 1125689999999999999875 6899999998865
No 437
>1nw1_A Choline kinase (49.2 KD); phospholipid synthesis, protein kinase fold, transferase; 2.02A {Caenorhabditis elegans} SCOP: d.144.1.8
Probab=96.97 E-value=0.0018 Score=73.17 Aligned_cols=73 Identities=19% Similarity=0.233 Sum_probs=50.7
Q ss_pred CceeeeecceEEEEEEcCC--------CcEEEEEEeccccccchhcHHHHHHHHHhcCCCC-eeeEEEeeccCCeeEEEE
Q 002021 687 NNLIGRGGFGSVYKASLGD--------GMEVAVKVFTSQCGRAFKSFDVECEIMKSIRHRN-LIKVISSCSNEEFKALVL 757 (979)
Q Consensus 687 ~~~lG~G~~g~Vy~~~~~~--------~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~h~n-iv~l~~~~~~~~~~~lv~ 757 (979)
.+.|+.|....||++...+ ++.+++|+.... ...+.+..|..+++.+...+ ..++++.+.+ .+||
T Consensus 78 v~~l~gG~tN~~y~v~~~~~~~~~~~~~~~~vlRi~~~~--~~~~~li~E~~~l~~L~~~g~~P~l~~~~~~----g~v~ 151 (429)
T 1nw1_A 78 ISRIKGGMSNMLFLCRLSEVYPPIRNEPNKVLLRVYFNP--ETESHLVAESVIFTLLSERHLGPKLYGIFSG----GRLE 151 (429)
T ss_dssp EEEECCCTTEEEEEEEECTTSCCSSSCCSEEEEEEECSC--CCHHHHHHHHHHHHHHHHTTSSSCEEEEETT----EEEE
T ss_pred EEEeCCCcccceEEEEeCCCccccCCCCceEEEEEeCCC--CcHHHHHHHHHHHHHHHhCCCCCcEEEEeCC----CEEE
Confidence 3578889999999997643 578999988432 11145567999998885333 3566776643 2899
Q ss_pred EecCCCcc
Q 002021 758 EYMPHGSL 765 (979)
Q Consensus 758 E~~~~g~L 765 (979)
||++|.++
T Consensus 152 e~l~G~~l 159 (429)
T 1nw1_A 152 EYIPSRPL 159 (429)
T ss_dssp CCCCEEEC
T ss_pred EEeCCccc
Confidence 99987555
No 438
>2qg7_A Ethanolamine kinase PV091845; malaria, SGC, structural genomics consortium, transferase; 2.41A {Plasmodium vivax}
Probab=96.91 E-value=0.0032 Score=71.36 Aligned_cols=75 Identities=15% Similarity=0.153 Sum_probs=50.3
Q ss_pred CceeeeecceEEEEEEcCC-CcEEEEEEeccccccchhcHHHHHHHHHhcCCCCe-eeEEEeeccCCeeEEEEEecCCCc
Q 002021 687 NNLIGRGGFGSVYKASLGD-GMEVAVKVFTSQCGRAFKSFDVECEIMKSIRHRNL-IKVISSCSNEEFKALVLEYMPHGS 764 (979)
Q Consensus 687 ~~~lG~G~~g~Vy~~~~~~-~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~h~ni-v~l~~~~~~~~~~~lv~E~~~~g~ 764 (979)
.+.|+.|-...+|+....+ +..+++|+...... ..-...+|..+++.+...++ .++++++.. ..||||++|.+
T Consensus 113 i~~lsgG~tN~~y~v~~~~~~~~~vLRi~g~~~~-~~idR~~E~~vl~~L~~~gl~P~ll~~~~~----G~v~e~I~G~~ 187 (458)
T 2qg7_A 113 FQIINGGITNILIKVKDMSKQAKYLIRLYGPKTD-EIINREREKKISCILYNKNIAKKIYVFFTN----GRIEEFMDGYA 187 (458)
T ss_dssp EEEECC--CEEEEEEEETTTTEEEEEEEECC-CC-SCSCHHHHHHHHHHHTTSSSBCCEEEEETT----EEEEECCCSEE
T ss_pred EEEcCCCeEeEEEEEEECCCCceEEEEECCCChh-hhcCHHHHHHHHHHHHhcCCCCCEEEEeCC----eEEEEeeCCcc
Confidence 3578889999999998754 47888998754322 22233689999999965444 466776632 25999999865
Q ss_pred cc
Q 002021 765 LE 766 (979)
Q Consensus 765 L~ 766 (979)
+.
T Consensus 188 l~ 189 (458)
T 2qg7_A 188 LS 189 (458)
T ss_dssp CC
T ss_pred CC
Confidence 53
No 439
>3rfe_A Platelet glycoprotein IB beta chain; platelet surface receptor, GPIX, cell adhesion; HET: NAG; 1.25A {Homo sapiens} PDB: 3rez_A*
Probab=96.88 E-value=0.0008 Score=61.90 Aligned_cols=58 Identities=28% Similarity=0.379 Sum_probs=33.2
Q ss_pred eeecCCcccc-CCCCCcccccccccccccccccccccCCccccCccccCeEeccCCccccc
Q 002021 523 YLFLGYNRLQ-GSIPNSFGDLISLKFLNLSNNNLSGVIPASLEKLSYLEDLNLSFNQLEGK 582 (979)
Q Consensus 523 ~L~Ls~N~l~-~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~ 582 (979)
.++.+++.|+ ..+|..+. ++|+.|+|++|+|+.+.+..|..+++|+.|+|++|+|.+.
T Consensus 12 ~v~Cs~~~L~~~~vP~~lp--~~l~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~NP~~Cd 70 (130)
T 3rfe_A 12 LVDCGRRGLTWASLPTAFP--VDTTELVLTGNNLTALPPGLLDALPALRTAHLGANPWRCD 70 (130)
T ss_dssp EEECCSSCCCTTTSCSCCC--TTCSEEECTTSCCSSCCTTTGGGCTTCCEEECCSSCCBCS
T ss_pred EEEeCCCCCccccCCCCCC--cCCCEEECCCCcCCccChhhhhhccccCEEEecCCCeecc
Confidence 4455555554 12333221 2466666666666655555666666777777777776653
No 440
>1zyl_A Hypothetical protein YIHE; putative protein kinase, structural genomics, PSI, protein structure initiative; 2.80A {Escherichia coli} SCOP: d.144.1.6
Probab=96.82 E-value=0.0052 Score=66.67 Aligned_cols=140 Identities=12% Similarity=0.115 Sum_probs=83.0
Q ss_pred ceeeeecceEEEEEEcCCCcEEEEEEeccccccchhcHHHHHHHHHhcCCCC--eeeEEEe-----eccCCeeEEEEEec
Q 002021 688 NLIGRGGFGSVYKASLGDGMEVAVKVFTSQCGRAFKSFDVECEIMKSIRHRN--LIKVISS-----CSNEEFKALVLEYM 760 (979)
Q Consensus 688 ~~lG~G~~g~Vy~~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~h~n--iv~l~~~-----~~~~~~~~lv~E~~ 760 (979)
..++ |....||+....+|+.+++|...... ...+.+..|..+++.++... +.+++.. ....+..++||||+
T Consensus 32 ~~l~-g~~n~~y~v~~~~g~~~vlK~~~~~~-~~~~~~~~E~~~~~~L~~~g~~vp~~~~~~g~~~~~~~g~~~~l~~~i 109 (328)
T 1zyl_A 32 TPLN-SYENRVYQFQDEDRRRFVVKFYRPER-WTADQILEEHQFALQLVNDEVPVAAPVAFNGQTLLNHQGFYFAVFPSV 109 (328)
T ss_dssp EEEC-CSSSEEEEECCTTCCCEEEEEECTTT-SCHHHHHHHHHHHHHHHHTTCSBCCCCCBTTBSCEEETTEEEEEEECC
T ss_pred Eeec-CcccceEEEEcCCCCEEEEEEcCCCC-CCHHHHHHHHHHHHHHHHcCCeecceeecCCcEEEEECCEEEEEEEec
Confidence 4576 88899999987778789999986431 23456777888888874222 3334433 11245567899999
Q ss_pred CCCcccee--------------ecc----C----CCCCCHHHH----------------------HHHHHHHHHHHHHHh
Q 002021 761 PHGSLEKY--------------LYS----S----NCILDIFQR----------------------LNIMIDVASALEYLH 796 (979)
Q Consensus 761 ~~g~L~~~--------------l~~----~----~~~l~~~~~----------------------~~i~~~ia~~L~~LH 796 (979)
+|..+... ++. . ....++... ...+.+++..++-.-
T Consensus 110 ~G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 189 (328)
T 1zyl_A 110 GGRQFEADNIDQMEAVGRYLGRMHQTGRKQLFIHRPTIGLNEYLIEPRKLFEDATLIPSGLKAAFLKATDELIAAVTAHW 189 (328)
T ss_dssp CCEECCSSCHHHHHHHHHHHHHHHHHHTSSCCSSSCBCSHHHHTHHHHHHHHTCSSSCTTTHHHHHHHHHHHHHHHHHHC
T ss_pred CCCCCCCCCHHHHHHHHHHHHHHHHhhccCCCccCCCCCHHHHHhhHHHHHhhcCcCCHHHHHHHHHHHHHHHHHHHHHh
Confidence 88655310 110 0 011222110 011112222222221
Q ss_pred c-CCCCCeEecCCCCCCEEeCCCCcEEEEeeccccc
Q 002021 797 F-GYSAPVIHCDLKPSNVLLDDNMVAHLSDFSIAKM 831 (979)
Q Consensus 797 ~-~~~~~i~H~Dik~~NIll~~~~~~kl~Dfg~~~~ 831 (979)
. .....++|+|+++.||+++ + .+.++||+.+..
T Consensus 190 ~~~~~~~l~HgD~~~~Nil~~-~-~~~lIDfe~a~~ 223 (328)
T 1zyl_A 190 REDFTVLRLHGDCHAGNILWR-D-GPMFVDLDDARN 223 (328)
T ss_dssp CSCSCCEECCSSCSGGGEEES-S-SEEECCCTTCCE
T ss_pred hhcCCeeeeeCCCCcccEeEc-C-CCEEEECCCCCc
Confidence 1 1255688999999999999 4 899999988754
No 441
>3c5i_A Choline kinase; choline, kinase, malaria, transferase, structural genomics, structural genomics consortium; 2.20A {Plasmodium knowlesi} PDB: 3fi8_A*
Probab=96.80 E-value=0.0022 Score=71.05 Aligned_cols=73 Identities=12% Similarity=0.222 Sum_probs=46.3
Q ss_pred ceeeeecceEEEEEEcCC---------CcEEEEEEeccccccchhcHHHHHHHHHhcCCCC-eeeEEEeeccCCeeEEEE
Q 002021 688 NLIGRGGFGSVYKASLGD---------GMEVAVKVFTSQCGRAFKSFDVECEIMKSIRHRN-LIKVISSCSNEEFKALVL 757 (979)
Q Consensus 688 ~~lG~G~~g~Vy~~~~~~---------~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~h~n-iv~l~~~~~~~~~~~lv~ 757 (979)
+.++.|....+|+....+ ++.+++|+...... .......|.++++.+...+ +.++++... -++||
T Consensus 39 ~~l~~G~~N~~y~v~~~~~~~~~~~~~~~~~vlRi~~~~~~-~~~~~~~E~~~l~~L~~~g~~P~~~~~~~----~~~v~ 113 (369)
T 3c5i_A 39 KQILSGLTNQLFEVGLKEETANNYNSIRTRVLFRIYGKHVD-ELYNTISEFEVYKTMSKYKIAPQLLNTFN----GGRIE 113 (369)
T ss_dssp EEC----CCEEEEEEECHHHHTTCTTSCCEEEEEECCTTGG-GTSCHHHHHHHHHHHHHTTSSCCEEEEET----TEEEE
T ss_pred EEeCCcccceEEEEEeCCCCcccccCCCceEEEEecCCCcc-ceecHHHHHHHHHHHHhcCCCCceEEecC----CcEEE
Confidence 467888889999997643 26888998754322 2234577999998885333 346665542 26899
Q ss_pred EecCCCcc
Q 002021 758 EYMPHGSL 765 (979)
Q Consensus 758 E~~~~g~L 765 (979)
||++|.++
T Consensus 114 e~i~G~~l 121 (369)
T 3c5i_A 114 EWLYGDPL 121 (369)
T ss_dssp ECCCSEEC
T ss_pred EEecCCcC
Confidence 99988654
No 442
>3f2s_A CK, chetk-alpha, choline kinase alpha; non-protein kinase, structural genomics consortium, SGC, hemicholinium-3, alternative splicing, cytoplasm; HET: ADP HC6; 1.70A {Homo sapiens} PDB: 3f2r_A* 3g15_A* 2i7q_A 2cko_A 2ckp_A* 2ckq_A*
Probab=96.29 E-value=0.013 Score=64.74 Aligned_cols=140 Identities=16% Similarity=0.157 Sum_probs=83.2
Q ss_pred ceeeeecceEEEEEEcCC--------CcEEEEEEecccccc-----------ch-------hcHHHHHHHHHhcC-CCCe
Q 002021 688 NLIGRGGFGSVYKASLGD--------GMEVAVKVFTSQCGR-----------AF-------KSFDVECEIMKSIR-HRNL 740 (979)
Q Consensus 688 ~~lG~G~~g~Vy~~~~~~--------~~~vAvK~~~~~~~~-----------~~-------~~~~~E~~~l~~l~-h~ni 740 (979)
+.|..|-...+|+....+ ++.|.+++.-...+. .. +....|+++++.+. +.-.
T Consensus 58 ~~l~gGlTN~~~~v~~~~~~~~~~~~~~~~llRi~G~~te~~~~~~~~~~~idR~~~~~~~~~~~~E~~~l~~L~~~Gi~ 137 (401)
T 3f2s_A 58 SVIRGGLSNMLFQCSLPDTTATLGDEPRKVLLRLYGAILQMRSCNKEGSEQAQKENEFQGAEAMVLESVMFAILAERSLG 137 (401)
T ss_dssp EEEECSSEEEEEEEECCTTCCCSSSCCSEEEEEEEEC-----------------------CHHHHHHHHHHHHHHHTTSS
T ss_pred EEcCCCccCceEEEEeCCCcccccCCCccEEEEeCCCCcccccccccccchhhhhhhhccchhhHHHHHHHHHHHhcCCC
Confidence 567778899999997754 367888887543221 01 12234888888885 4445
Q ss_pred eeEEEeeccCCeeEEEEEecCCCcccee-e----------------ccC----CCCCC--HHHHHHHHHHHH--------
Q 002021 741 IKVISSCSNEEFKALVLEYMPHGSLEKY-L----------------YSS----NCILD--IFQRLNIMIDVA-------- 789 (979)
Q Consensus 741 v~l~~~~~~~~~~~lv~E~~~~g~L~~~-l----------------~~~----~~~l~--~~~~~~i~~~ia-------- 789 (979)
.++++++.++ +|+||++|.+|..- + +.. ..... +..+.++..++.
T Consensus 138 Pkl~~~~~~G----~i~efI~G~~L~~~dl~~p~~~~~iA~~L~~LH~~~~~~~~~~~~l~~~i~~~~~~l~~~~~~~~~ 213 (401)
T 3f2s_A 138 PKLYGIFPQG----RLEQFIPSRRLDTEELSLPDISAEIAEKMATFHGMKMPFNKEPKWLFGTMEKYLKEVLRIKFTEES 213 (401)
T ss_dssp CCEEEEETTE----EEEECCCEEECCGGGGGSHHHHHHHHHHHHHHHTCCCSSCCSCCHHHHHHHHHHHHHHHCCCCSHH
T ss_pred CeEEEEeCCC----eEEEecCCccCCHHHHhhHHHHHHHHHHHHHHhCCCCCCCCCcchHHHHHHHHHHHHHhccCcchh
Confidence 5677776532 89999997655321 1 111 11122 223333333221
Q ss_pred --------------HHH----HHHhc-CCCCCeEecCCCCCCEEeCCC------CcEEEEeeccccc
Q 002021 790 --------------SAL----EYLHF-GYSAPVIHCDLKPSNVLLDDN------MVAHLSDFSIAKM 831 (979)
Q Consensus 790 --------------~~L----~~LH~-~~~~~i~H~Dik~~NIll~~~------~~~kl~Dfg~~~~ 831 (979)
.-+ +++.. .....++|+|+.+.||+++.+ +.+.++||..+..
T Consensus 214 ~~~~~~~~~~~~l~~e~~~l~~~l~~~~~~~v~~H~Dl~~~Nil~~~~~~~~~~~~~~lID~E~a~~ 280 (401)
T 3f2s_A 214 RIKKLHKLLSYNLPLELENLRSLLESTPSPVVFCHNDCQEGNILLLEGRENSEKQKLMLIDFEYSSY 280 (401)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHTSCCCEEEECSCCCGGGEEEETTGGGCSSSCEEECCCTTCEE
T ss_pred hhhhhhhhhhHHHHHHHHHHHHHHhhcCCCeeEEeccCCcccEEEcCCcccCcccceEEEeeccCCc
Confidence 112 22221 124578999999999999876 7899999987753
No 443
>3i1a_A Spectinomycin phosphotransferase; protein kinase, aminoglycoside phosphotransferase, antibiotic resistance; HET: MES PG4; 1.70A {Legionella pneumophila} PDB: 3i0q_A* 3i0o_A* 3q2m_A*
Probab=96.26 E-value=0.015 Score=63.24 Aligned_cols=67 Identities=12% Similarity=0.152 Sum_probs=44.2
Q ss_pred eecceEEEEEEcCCCcEEEEEEeccccccchhcHHHHHHHHHhcCC---CCeeeEEEe------eccCCeeEEEEEecCC
Q 002021 692 RGGFGSVYKASLGDGMEVAVKVFTSQCGRAFKSFDVECEIMKSIRH---RNLIKVISS------CSNEEFKALVLEYMPH 762 (979)
Q Consensus 692 ~G~~g~Vy~~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~h---~niv~l~~~------~~~~~~~~lv~E~~~~ 762 (979)
.|....||+....+| .+++|+..... ...|+.+++.+.. |.+.+.+.. ....+..++||||++|
T Consensus 33 ~g~~N~vy~v~~~~g-~~vLK~~~~~~------~~~E~~~l~~L~~~g~~~vp~pi~~~~G~~~~~~~g~~~~l~~~i~G 105 (339)
T 3i1a_A 33 ADTNAFAYQADSESK-SYFIKLKYGYH------DEINLSIIRLLHDSGIKEIIFPIHTLEAKLFQQLKHFKIIAYPFIHA 105 (339)
T ss_dssp SCSSCEEEEEECSSC-EEEEEEEECSS------CCHHHHHHHHHHHTTCCSSCCCCCCTTSCSSEECSSEEEEEEECCCC
T ss_pred CccccceEEEEeCCC-CEEEEEecCcc------chHHHHHHHHHHhcCCcccccceecCCCCEEEEECCEEEEEEeccCC
Confidence 334689999987677 89999875432 1357777776632 224444432 1235678899999998
Q ss_pred Ccc
Q 002021 763 GSL 765 (979)
Q Consensus 763 g~L 765 (979)
..+
T Consensus 106 ~~~ 108 (339)
T 3i1a_A 106 PNG 108 (339)
T ss_dssp CBT
T ss_pred CcC
Confidence 766
No 444
>3rfe_A Platelet glycoprotein IB beta chain; platelet surface receptor, GPIX, cell adhesion; HET: NAG; 1.25A {Homo sapiens} PDB: 3rez_A*
Probab=96.17 E-value=0.0059 Score=56.04 Aligned_cols=37 Identities=24% Similarity=0.305 Sum_probs=28.4
Q ss_pred ccceEeccCCccCcccchhhcCCcccceeecCCcccc
Q 002021 496 VLVGIDLSRNNFSGVIPTEIGGLKNLEYLFLGYNRLQ 532 (979)
Q Consensus 496 ~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~ 532 (979)
+|+.|+|++|+|+.+.+..|..+++|+.|+|++|.+.
T Consensus 32 ~l~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~NP~~ 68 (130)
T 3rfe_A 32 DTTELVLTGNNLTALPPGLLDALPALRTAHLGANPWR 68 (130)
T ss_dssp TCSEEECTTSCCSSCCTTTGGGCTTCCEEECCSSCCB
T ss_pred CCCEEECCCCcCCccChhhhhhccccCEEEecCCCee
Confidence 4667777777777666777788888888888888775
No 445
>2yle_A Protein spire homolog 1; actin-binding protein, actin polymerization; 1.80A {Homo sapiens} PDB: 2ylf_A 3r7g_A 3rbw_A
Probab=96.14 E-value=0.011 Score=58.30 Aligned_cols=102 Identities=14% Similarity=0.063 Sum_probs=67.7
Q ss_pred ccceeeccCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCEEeCCCCcEEEEeeccccccCCCCCcceecc
Q 002021 764 SLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFSIAKMLTGEDQSMIQTQ 843 (979)
Q Consensus 764 ~L~~~l~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~i~H~Dik~~NIll~~~~~~kl~Dfg~~~~~~~~~~~~~~~~ 843 (979)
+|.+.+...+.+++++++|.++.|.+.+|.-.-. .+.-..+=+.|..|++..+|.|...+ ..+.
T Consensus 34 SL~eIL~~~~~PlsEEqaWALc~Qc~~~L~~~~~--~~~~~~~i~~~~~i~l~~dG~V~f~~-~~s~------------- 97 (229)
T 2yle_A 34 SLEEILRLYNQPINEEQAWAVCYQCCGSLRAAAR--RRQPRHRVRSAAQIRVWRDGAVTLAP-AADD------------- 97 (229)
T ss_dssp EHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHH--TTCCCCCCCSGGGEEEETTSCEEECC-C----------------
T ss_pred cHHHHHHHcCCCcCHHHHHHHHHHHHHHHHhhhh--cccCCceecCCcceEEecCCceeccc-cccc-------------
Confidence 7888888778899999999999999999888721 11111233456888999999888764 1110
Q ss_pred cccCCCCCCccccCCCCCCCchhHHHHHHHHHHHHcCCCC
Q 002021 844 TLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFTGKKP 883 (979)
Q Consensus 844 ~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~tg~~P 883 (979)
.....+.|||... ...+.+.=|||+|+++|..+--..|
T Consensus 98 -~~~~~~~~pe~~~-~~~te~~~IysLG~tLY~ALDygL~ 135 (229)
T 2yle_A 98 -AGEPPPVAGKLGY-SQCMETEVIESLGIIIYKALDYGLK 135 (229)
T ss_dssp ----------CCSS-SSSCHHHHHHHHHHHHHHHHTTTCC
T ss_pred -ccccCCCChhhcc-ccchHHHHHHHHHHHHHHHhhcCCC
Confidence 0122466888763 3456788999999999998875554
No 446
>3mes_A Choline kinase; malaria, structural genomics, structural genomics consortium, SGC, transferase; HET: ADP DME PT3; 2.35A {Cryptosporidium parvum}
Probab=95.77 E-value=0.025 Score=63.15 Aligned_cols=74 Identities=12% Similarity=0.210 Sum_probs=50.6
Q ss_pred CceeeeecceEEEEEEcCC--------CcEEEEEEeccccccchhcHHHHHHHHHhcC-CCCeeeEEEeeccCCeeEEEE
Q 002021 687 NNLIGRGGFGSVYKASLGD--------GMEVAVKVFTSQCGRAFKSFDVECEIMKSIR-HRNLIKVISSCSNEEFKALVL 757 (979)
Q Consensus 687 ~~~lG~G~~g~Vy~~~~~~--------~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~~~~lv~ 757 (979)
.+.+..|-...+|+....+ ++.+++|+..... ...-+..+|.++++.+. +.-..++++.+. -+.||
T Consensus 75 v~~lsGG~TN~~y~v~~~~~~~~~~~~~~~~vlRi~g~~t-~~~idR~~E~~~l~~L~~~gi~P~l~~~~~----~~~I~ 149 (424)
T 3mes_A 75 VKQIFSGLTNQLFVVSIVNESMSLSLKHPRILFRIYGKHV-GKFYDSKVELDVFRYLSNINIAPNIIADFP----EGRIE 149 (424)
T ss_dssp EEEECCCSSSEEEEEEECCC-----CCCSEEEEEECCCCC--CCCCHHHHHHHHHHHHHTTSSCCEEEEET----TEEEE
T ss_pred EEEcCCCcccceEEEEeCCCcccccCCCCeEEEEECCCCc-chhcCHHHHHHHHHHHHhcCCCCCEEEEcC----CCEEE
Confidence 3567788899999997653 5789999865432 22334578999999885 333445555442 26899
Q ss_pred EecCCCcc
Q 002021 758 EYMPHGSL 765 (979)
Q Consensus 758 E~~~~g~L 765 (979)
||++|.++
T Consensus 150 efI~G~~l 157 (424)
T 3mes_A 150 EFIDGEPL 157 (424)
T ss_dssp ECCCSEEC
T ss_pred EEeCCccC
Confidence 99998765
No 447
>3g15_A CK, chetk-alpha, choline kinase alpha; non-protein kinase, structural genomics CONS SGC, hemicholinium-3, transferase; HET: ADP HC6; 1.70A {Homo sapiens} PDB: 3f2r_A* 2i7q_A 2cko_A 2ckp_A* 2ckq_A*
Probab=93.57 E-value=0.099 Score=58.24 Aligned_cols=30 Identities=27% Similarity=0.380 Sum_probs=25.1
Q ss_pred CeEecCCCCCCEEe------CCCCcEEEEeeccccc
Q 002021 802 PVIHCDLKPSNVLL------DDNMVAHLSDFSIAKM 831 (979)
Q Consensus 802 ~i~H~Dik~~NIll------~~~~~~kl~Dfg~~~~ 831 (979)
.++|+|+.+.||++ +++..++++||.+|..
T Consensus 245 vfcHnDl~~gNil~~~~~~~~~~~~l~vIDwEya~~ 280 (401)
T 3g15_A 245 VFCHNDCQEGNILLLEGRENSEKQKLMLIDFEYSSY 280 (401)
T ss_dssp EEECSCCCGGGEEEETTGGGCSSCCEEECCCTTCEE
T ss_pred eeEEecCCCCeEEEecCcccCcCCeEEEechHhccC
Confidence 36799999999999 4567799999998754
No 448
>2ks1_B Epidermal growth factor receptor; ERBB1, ERBB2, transmembrane, heterodimer, complex, tyrosine receptor, bicelles, transferase; NMR {Homo sapiens}
Probab=85.31 E-value=1 Score=31.64 Aligned_cols=25 Identities=20% Similarity=0.238 Sum_probs=9.8
Q ss_pred eeehhhhhhHHHHHHHHHHHHHHhH
Q 002021 627 ILLGIVLPLSTTFMIVVILLILRYR 651 (979)
Q Consensus 627 ~~~~iv~~~~~~~~~~~i~~~~~~r 651 (979)
|..+++.++++++++.++++++++|
T Consensus 13 IA~gVVgGv~~~~ii~~~~~~~~RR 37 (44)
T 2ks1_B 13 IATGMVGALLLLLVVALGIGLFMRR 37 (44)
T ss_dssp STHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred EEeehhHHHHHHHHHHHHHHHHhhh
Confidence 3344444344333333333343333
No 449
>4ann_A ESSB; membrane protein, membrane secretion, ESS type VII secretion virulence; 1.05A {Staphylococcus aureus subsp}
Probab=80.44 E-value=4.3 Score=39.98 Aligned_cols=125 Identities=10% Similarity=0.159 Sum_probs=82.4
Q ss_pred CCCCeeeEEEeeccCCeeEEEEEecCCCccceeeccCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCEEe
Q 002021 736 RHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLL 815 (979)
Q Consensus 736 ~h~niv~l~~~~~~~~~~~lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~i~H~Dik~~NIll 815 (979)
.||+.++. .+-.+++...+.++ .......|-.- ...+...+++++.+|+....+++ .-+|--+.|+|+++
T Consensus 43 ~~~~Fl~~-~I~e~eD~v~~~y~--~~~~~~~f~~i--k~~~~~eKlr~l~ni~~l~~~~~-----~r~tf~L~P~NL~f 112 (215)
T 4ann_A 43 HSPYFIDA-ELTELRDSFQIHYD--INDNHTPFDNI--KSFTKNEKLRYLLNIKNLEEVNR-----TRYTFVLAPDELFF 112 (215)
T ss_dssp CCTTBCCE-EEEECSSEEEEEEC--CCTTSEEGGGG--GGSCHHHHHHHHHHGGGGGGGGG-----SSEECCCSGGGEEE
T ss_pred cCCcccce-EEEEcccEEEEEEE--cCcccCCHHHH--HhcCHHHHHHHHHHHHHHHHHhc-----CceEEEEecceEEE
Confidence 58888876 44445555444444 33334444321 24788899999999999886666 33677799999999
Q ss_pred CCCCcEEEEeeccccccCCCCCcceecccccCCCCCCccccCCCCCCCchhHHHHHHHHHHHHcCCCCCcccccCcchH
Q 002021 816 DDNMVAHLSDFSIAKMLTGEDQSMIQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFTGKKPTDEIFNGEMTL 894 (979)
Q Consensus 816 ~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~tg~~P~~~~~~~~~~~ 894 (979)
+.++.+++.-.|+...+ +|. ..++..=.-.+=+++..+++++..|++...|...+
T Consensus 113 ~~~~~p~i~~RGik~~l-------------------~P~-----~~~ee~fL~qyKAliiall~~K~~Fe~l~~G~lel 167 (215)
T 4ann_A 113 TRDGLPIAKTRGLQNVV-------------------DPL-----PVSEAEFLTRYKALVICAFNEKQSFDALVEGNLEL 167 (215)
T ss_dssp CTTSCEEESCCEETTTB-------------------SCC-----CCCHHHHHHHHHHHHHHHHCTTCCHHHHHHSCGGG
T ss_pred cCCCCEEEEEccCccCC-------------------CCC-----CCCHHHHHHHHHHHHHHHHcCCCCHHHHHcChHhh
Confidence 99999999877764332 222 11222223346788888999999998766554433
No 450
>2l2t_A Receptor tyrosine-protein kinase ERBB-4; transmembrane dimer, membrane domain, membrane protei; NMR {Homo sapiens}
Probab=77.90 E-value=2.8 Score=29.46 Aligned_cols=17 Identities=12% Similarity=0.153 Sum_probs=6.2
Q ss_pred hHHHHHHHHHHHHHHhH
Q 002021 635 LSTTFMIVVILLILRYR 651 (979)
Q Consensus 635 ~~~~~~~~~i~~~~~~r 651 (979)
+++++++.+..+++++|
T Consensus 20 v~~v~ii~~~~~~~~RR 36 (44)
T 2l2t_A 20 LFILVIVGLTFAVYVRR 36 (44)
T ss_dssp HHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHhhh
Confidence 33333333333333333
No 451
>2jwa_A Receptor tyrosine-protein kinase ERBB-2; transmembrane helix dimer, protein kinase receptor membrane domain, ATP-binding, glycoprotein; NMR {Homo sapiens} PDB: 2ks1_A
Probab=76.11 E-value=3 Score=29.24 Aligned_cols=7 Identities=14% Similarity=0.420 Sum_probs=3.0
Q ss_pred eehhhhh
Q 002021 628 LLGIVLP 634 (979)
Q Consensus 628 ~~~iv~~ 634 (979)
+++++++
T Consensus 14 Ia~~vVG 20 (44)
T 2jwa_A 14 IISAVVG 20 (44)
T ss_dssp HHHHHHH
T ss_pred hHHHHHH
Confidence 3444444
No 452
>3cxl_A N-chimerin; SH2, RHO-GAP, structural genomics consortium, SGC, gtpas activation, metal-binding, phorbol-ester binding, SH2 domai finger; 2.60A {Homo sapiens} PDB: 1xa6_A
Probab=71.16 E-value=0.4 Score=54.27 Aligned_cols=59 Identities=8% Similarity=0.044 Sum_probs=16.9
Q ss_pred CCceeeeecceEEEEEEcCC-CcEEEE------EEecccc--ccchhcHHHHHHHHHhcCCCCeeeEEEee
Q 002021 686 ENNLIGRGGFGSVYKASLGD-GMEVAV------KVFTSQC--GRAFKSFDVECEIMKSIRHRNLIKVISSC 747 (979)
Q Consensus 686 ~~~~lG~G~~g~Vy~~~~~~-~~~vAv------K~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~ 747 (979)
..+.+| ||+||+|.+.. ..+||| |..+... ......+.+|+.+++..+|||+++.+++.
T Consensus 146 l~~~lG---fG~v~~g~~~~~~~~Vav~~~~~~K~~~~~~~~~e~~~~~~rea~l~~~~~H~niv~~h~f~ 213 (463)
T 3cxl_A 146 IYEHVG---YTTLNREPAYKKHMPVLKETHDERDSTGQDGVSEKRLTSLVRRATLKENEQIPKYEKIHNFK 213 (463)
T ss_dssp STTTSS---BCCC---------CCBGGGC-----------------------------------CBCCCEE
T ss_pred ccccCC---chhhhcccccccCCchhhhhccCccccccccccccccccccccccccccccccccCCCcceE
Confidence 445676 99999998753 367888 6654321 22345678899999999999999988764
No 453
>2k1k_A Ephrin type-A receptor 1; EPHA1, receptor tyrosine kinase, dimeric transmembrane domain, ATP-binding, glycoprotein, nucleotide-binding; NMR {Homo sapiens} PDB: 2k1l_A
Probab=70.75 E-value=2.7 Score=28.57 Aligned_cols=26 Identities=15% Similarity=0.364 Sum_probs=14.4
Q ss_pred eeehhhhhhHHHHHHHHHHHHHHhHh
Q 002021 627 ILLGIVLPLSTTFMIVVILLILRYRQ 652 (979)
Q Consensus 627 ~~~~iv~~~~~~~~~~~i~~~~~~r~ 652 (979)
.+.++|++.++.+++++.+.++.+|+
T Consensus 12 aIAGiVvG~v~gv~li~~l~~~~~rr 37 (38)
T 2k1k_A 12 EIVAVIFGLLLGAALLLGILVFRSRR 37 (38)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHCC
T ss_pred ceeeeehHHHHHHHHHHHHHHHHeec
Confidence 34666666665555555555554443
No 454
>4ano_A ESSB; membrane protein, membrane secretion, ESS type V secretion S; HET: MSE; 1.70A {Geobacillus thermodenitrificans ng80-2organism_taxid}
Probab=63.06 E-value=15 Score=36.26 Aligned_cols=117 Identities=11% Similarity=0.118 Sum_probs=74.5
Q ss_pred CCCCeeeEEEeeccCCeeEEEEEecCCCccceeeccCCCCCCHHHHHHHHHHHHHHHH-HHhcCCCCCeEecCCCCCCEE
Q 002021 736 RHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALE-YLHFGYSAPVIHCDLKPSNVL 814 (979)
Q Consensus 736 ~h~niv~l~~~~~~~~~~~lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~~ia~~L~-~LH~~~~~~i~H~Dik~~NIl 814 (979)
.||++ -..+-.+++...+.++--++ ...|-.- ...+..++++.+.+|+.... +++ .-+|--+.|+|++
T Consensus 48 ~~~~f--~~~I~~~eD~~~i~y~~~~~--~~~f~~i--~~~~~~eKlrll~nl~~L~~~~~~-----~r~tf~l~P~NL~ 116 (219)
T 4ano_A 48 VDPCI--VRDIDVSEDEVKVVIKPPSS--FLTFAAI--RKTTLLSRIRAAIHLVSKVKHHSA-----RRLIFIVCPENLM 116 (219)
T ss_dssp SCSSS--EEEEEECSSEEEEEEECCTT--CEEHHHH--HTSCHHHHHHHHHHHHHHHSSCCS-----SSEECCCCGGGEE
T ss_pred cCCCC--CeEEEEeCCEEEEEEEcCcc--cCcHHHH--HhcCHHHHHHHHHHHHHHHHHhhh-----CceeEEEeCceEE
Confidence 57777 33333556666555554333 2222211 24688899999999888777 555 4467778999999
Q ss_pred eCCCCcEEEEeeccccccCCCCCcceecccccCCCCCCccccCCCCCCCchhHHHHHHHHHHHHcCCCCCccc
Q 002021 815 LDDNMVAHLSDFSIAKMLTGEDQSMIQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFTGKKPTDEI 887 (979)
Q Consensus 815 l~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~tg~~P~~~~ 887 (979)
+|.++.+++.-.|+-..+ +|.- .++..=.-.+=+++..++.++..|++.
T Consensus 117 f~~~~~p~i~hRGi~~~l-------------------pP~e-----~~ee~fl~qyKali~all~~K~~Fe~l 165 (219)
T 4ano_A 117 FNRALEPFFLHVGVKESL-------------------PPDE-----WDDERLLREVKATVLALTEGEYRFDEY 165 (219)
T ss_dssp ECTTCCEEESCCEETTTB-------------------SSCS-----CCHHHHHHHHHHHHHHHTTCSSCHHHH
T ss_pred EeCCCcEEEEEcCCcccC-------------------CCCC-----CCHHHHHHHHHHHHHHHHcCCCCHHHH
Confidence 999999999877764332 2321 112222234667888888888887653
No 455
>2lz0_A Uncharacterized protein; hypothetical leucine rich repeat protein, structural genomic unknown function; NMR {Bacteroides capillosus}
Probab=31.29 E-value=78 Score=26.65 Aligned_cols=45 Identities=22% Similarity=0.243 Sum_probs=21.0
Q ss_pred eeecCCccccccCccceeeccCCCCcCCCcccccCCCCCcCEEEccC
Q 002021 212 LVGIAPIAIFNVSTLKILGLQDNSLSGCLSSIGYARLPNLEILSLWG 258 (979)
Q Consensus 212 l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~l~~L~~L~L~~ 258 (979)
++.+...+|.++++|+.+.+..+ ++. +...+|.++.+|+.+.+..
T Consensus 8 vt~I~~~aF~~c~~L~~i~iP~~-v~~-Ig~~aF~~C~~L~~i~~~~ 52 (100)
T 2lz0_A 8 VVGMDKSLFAGNTVIREITVQPN-IGL-LYDGMFSGCTALEKLILTG 52 (100)
T ss_dssp CCSSCSCTTTTCTTCCCEEECTT-SSC-CCTTSSTTCTTCCCEEECC
T ss_pred cCEecHHHhcCCCCCcEEEcCCc-hhe-EcHHHHhccCCccEEEEcC
Confidence 44444455555555555555443 111 2222455555555555543
No 456
>2lz0_A Uncharacterized protein; hypothetical leucine rich repeat protein, structural genomic unknown function; NMR {Bacteroides capillosus}
Probab=27.96 E-value=82 Score=26.51 Aligned_cols=13 Identities=31% Similarity=0.278 Sum_probs=5.2
Q ss_pred cccCccccCeEec
Q 002021 562 SLEKLSYLEDLNL 574 (979)
Q Consensus 562 ~~~~l~~L~~L~L 574 (979)
+|.++.+|+.+.+
T Consensus 38 aF~~C~~L~~i~~ 50 (100)
T 2lz0_A 38 MFSGCTALEKLIL 50 (100)
T ss_dssp SSTTCTTCCCEEE
T ss_pred HHhccCCccEEEE
Confidence 3333444444333
No 457
>3ox7_P MH027; urokinase-type plasminogen activator, peptidyl inhibitor, pharmacophore, hydrolase, hydrolase-hydrolase inhibitor COM; HET: PG4; 1.58A {Homo sapiens} PDB: 3oy5_P 3oy6_P
Probab=24.35 E-value=22 Score=19.99 Aligned_cols=10 Identities=30% Similarity=1.109 Sum_probs=7.4
Q ss_pred CCCCccceeE
Q 002021 57 TPVCNWTGVA 66 (979)
Q Consensus 57 ~~~c~w~gv~ 66 (979)
...|+|+|..
T Consensus 5 dgacswrgle 14 (23)
T 3ox7_P 5 DGACSWRGLE 14 (26)
T ss_pred Ccccccccch
Confidence 3469999974
Done!