Citrus Sinensis ID: 002021

Local Sequence Feature Prediction

Prediction and MethodResult
Residue Number Marker
Protein Sequence ?
Secondary Structure (Consensus) ?
Disordered Region (Consensus) ?
Transmembrane Helix (Consensus) ?
Signal Peptide (Consensus) ?
Coiled Coil (COILS) ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610-------620-------630-------640-------650-------660-------670-------680-------690-------700-------710-------720-------730-------740-------750-------760-------770-------780-------790-------800-------810-------820-------830-------840-------850-------860-------870-------880-------890-------900-------910-------920-------930-------940-------950-------960-------970-------98
MSRFLLLHCLILISLFIAAATANTSSTITDQDALLALKAHITHDPTNFLAKNWNTSTPVCNWTGVACEVHSQRVTVLNISSLNLTGTIPSQLGNLSSLQSLNLSFNRLFGSIPSAIFTTYTLKYVCLRGNQLSGTFPSFISNKSSLQHLDLSSNALSGEIRANICREIPREFGNLPELELMSLAANNLQGKIPLKIGNLRNLEKLDIGDNKLVGIAPIAIFNVSTLKILGLQDNSLSGCLSSIGYARLPNLEILSLWGNNFSGTIPRFIFNASKLSILDLEGNSFSGFIPNTFGNLRNLSWLVLSDNYLTSSTQELSFLSSLSNCKFLKYFDLSYNPLYRILPRTTVGNLSHSLEEFKMSNCNISGGIPEEISNLTNLRTIYLGGNKLNGSILITLSKLQKLQDLGLKDNKLEGSIPYDICNLAELYRLDLDGNKLSGSIPACFSNLTSLRIVSLGSNELTSIPLTFWNLKDILNLNFSSNFLTGSLPLEIGSLKVLVGIDLSRNNFSGVIPTEIGGLKNLEYLFLGYNRLQGSIPNSFGDLISLKFLNLSNNNLSGVIPASLEKLSYLEDLNLSFNQLEGKIPRGGSFGNFSAQSFEGNELLCGSPNLQIPPCKTSIHHKSWKKSILLGIVLPLSTTFMIVVILLILRYRQRGKRPSNDANGPLVASRRMFSYLELCRATDGFSENNLIGRGGFGSVYKASLGDGMEVAVKVFTSQCGRAFKSFDVECEIMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFSIAKMLTGEDQSMIQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFTGKKPTDEIFNGEMTLKHWVNDWLPISTMEVVDANLLSQEDIHFVAKEQCVSFVFNLAMECTMEFPKQRINAKEIVTKLLKIRDSLLRNVGGRCVRQSNLN
ccHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHcccccccccccccccccccccccEEEEEccccccEEEEEEcccccCECccccccccccccEEEcccccccccccHHHHccccccEEEcccccccccccccccccccccEEEcccccccEEccccccccccccccccccccEEEcccccccccccHHHcccccccEEEcccccccccccHHHHccccccEEEccccccCECccHHHHcccccccEEEcccccccccccHHHHHccccccccccccCECccccccccccccccEEEccccccccccccccccccccccccccEEEccccccccccccccHHcccccccEEEccccCEECccccccccccccccEEcccccccccccccccccccccEEEcccccccccccHHHHcccccccEEccccCEEEcccccccccccccEEEccccccccccHHHHccccccccccccccccccccHHHccccccccEEccccccccccccHHccccccccccccccccccccccHHcccccccccccccccccccccHHHccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccEEEEHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccHHHHHHHHcccccccEEEcccccEEEEEEcccccEEEEEEEccccccccccHHHHHHHHHcccccccccEEEEEEcccccEEEEccccccccccccccccccccHHHHHHHHHHHHHHHHHHccccccccccccccccccccccccCEEEcccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHcccccccccccccccHHHHHHHHcccccccccccccccccccccccHHHHHHHHHHHHHHcccccccccccHHHHHHHHHHHHHHHHHHcccccccccccc
*SRFLLLHCLILISLFIAAATANTSSTITDQDALLALKAHITHDPTNFLAKNWNTSTPVCNWTGVACEVHSQRVTVLNISSLNLTGTIPSQLGNLSSLQSLNLSFNRLFGSIPSAIFTTYTLKYVCLRGNQLSGTFPSFISNKSSLQHLDLSSNALSGEIRANICREIPREFGNLPELELMSLAANNLQGKIPLKIGNLRNLEKLDIGDNKLVGIAPIAIFNVSTLKILGLQDNSLSGCLSSIGYARLPNLEILSLWGNNFSGTIPRFIFNASKLSILDLEGNSFSGFIPNTFGNLRNLSWLVLSDNYLTSSTQELSFLSSLSNCKFLKYFDLSYNPLYRILPRTTVGNLSHSLEEFKMSNCNISGGIPEEISNLTNLRTIYLGGNKLNGSILITLSKLQKLQDLGLKDNKLEGSIPYDICNLAELYRLDLDGNKLSGSIPACFSNLTSLRIVSLGSNELTSIPLTFWNLKDILNLNFSSNFLTGSLPLEIGSLKVLVGIDLSRNNFSGVIPTEIGGLKNLEYLFLGYNRLQGSIPNSFGDLISLKFLNLSNNNLSGVIPASLEKLSYLEDLNLSFNQLEGKIPRGGSFGNFSAQSFEGNELLCGSPNLQIPPC*****HKSWKKSILLGIVLPLSTTFMIVVILLILRYRQ************LVASRRMFSYLELCRATDGFSENNLIGRGGFGSVYKASLGDGMEVAVKVFTSQCGRAFKSFDVECEIMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFSIAKMLTGEDQSMIQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFTGKKPTDEIFNGEMTLKHWVNDWLPISTMEVVDANLLSQEDIHFVAKEQCVSFVFNLAMECTMEFPKQRINAKEIVTKLLKIRDS****************
xxxxHHHHHHHHHHHHHHHHHHxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxHHHHHHHHHHHHHHHHHHHHHHxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
SSSSSSSSSSSSSSSSSSSSSSxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
MSRFLLLHCLILISLFIAAATANTSSTITDQDALLALKAHITHDPTNFLAKNWNTSTPVCNWTGVACEVHSQRVTVLNISSLNLTGTIPSQLGNLSSLQSLNLSFNRLFGSIPSAIFTTYTLKYVCLRGNQLSGTFPSFISNKSSLQHLDLSSNALSGEIRANICREIPREFGNLPELELMSLAANNLQGKIPLKIGNLRNLEKLDIGDNKLVGIAPIAIFNVSTLKILGLQDNSLSGCLSSIGYARLPNLEILSLWGNNFSGTIPRFIFNASKLSILDLEGNSFSGFIPNTFGNLRNLSWLVLSDNYLTSSTQELSFLSSLSNCKFLKYFDLSYNPLYRILPRTTVGNLSHSLEEFKMSNCNISGGIPEEISNLTNLRTIYLGGNKLNGSILITLSKLQKLQDLGLKDNKLEGSIPYDICNLAELYRLDLDGNKLSGSIPACFSNLTSLRIVSLGSNELTSIPLTFWNLKDILNLNFSSNFLTGSLPLEIGSLKVLVGIDLSRNNFSGVIPTEIGGLKNLEYLFLGYNRLQGSIPNSFGDLISLKFLNLSNNNLSGVIPASLEKLSYLEDLNLSFNQLEGKIPRGGSFGNFSAQSFEGNELLCGSPNLQIPPCKTSIHHKSWKKSILLGIVLPLSTTFMIVVILLILRYRQRGKRPSNDANGPLVASRRMFSYLELCRATDGFSENNLIGRGGFGSVYKASLGDGMEVAVKVFTSQCGRAFKSFDVECEIMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFSIAKMLTGEDQSMIQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFTGKKPTDEIFNGEMTLKHWVNDWLPISTMEVVDANLLSQEDIHFVAKEQCVSFVFNLAMECTMEFPKQRINAKEIVTKLLKIRDSLLRNVGGRCVRQSNLN

Function Prediction

Annotation transfered from Closely Related SWISS-PROT Entries ?

Annotation ?Function Description ?Confidence Level ?Reference Protein ?
Probable LRR receptor-like serine/threonine-protein kinase At3g47570 probableC0LGP4

Prediction of Enzyme Commission Number ?

No confident prediction of EC number!

Spatial Structural Prediction

Structural Models Based on Templates

Template: 3V47, chain A
Confidence level:very confident
Coverage over the Query: 96-313,333-394,419-512
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Template: 3O6N, chain A
Confidence level:very confident
Coverage over the Query: 54-250,275-325,352-390,415-509
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Template: 3O6N, chain A
Confidence level:very confident
Coverage over the Query: 249-607
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Template: 1OGQ, chain A
Confidence level:very confident
Coverage over the Query: 25-337
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Template: 3RGZ, chain A
Confidence level:very confident
Coverage over the Query: 25-618
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Template: 3QD2, chain B
Confidence level:very confident
Coverage over the Query: 681-904,920-956
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Template: 3UIM, chain A
Confidence level:very confident
Coverage over the Query: 668-959
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Template: 3LVP, chain A
Confidence level:probable
Coverage over the Query: 676-896,909-968
View the alignment between query and template
View the model in PyMOL