Query 002022
Match_columns 979
No_of_seqs 214 out of 335
Neff 5.7
Searched_HMMs 29240
Date Mon Mar 25 09:04:07 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/002022.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/002022hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2a2f_X Exocyst complex compone 96.8 0.0045 1.5E-07 68.8 11.0 103 824-937 186-288 (325)
2 2d2s_A Exocyst complex compone 94.3 0.11 3.8E-06 55.1 9.0 197 318-611 13-217 (235)
3 2fji_1 Exocyst complex compone 85.6 51 0.0018 37.0 22.4 74 852-937 212-289 (399)
4 3fhn_A Protein transport prote 76.5 15 0.00053 44.5 12.6 118 813-937 504-632 (706)
5 1q0v_A Hydrophilic protein; ha 43.8 26 0.00088 31.1 4.6 15 3-17 7-21 (81)
6 3n1e_A Vacuolar protein sortin 35.3 2E+02 0.0067 28.0 9.8 78 853-937 42-122 (141)
7 3dwc_A TCMCP-1, metallocarboxy 32.6 6.4E+02 0.022 29.4 15.3 130 258-405 82-225 (505)
8 1deq_A Fibrinogen (alpha chain 27.9 2.4E+02 0.0081 31.7 10.0 44 228-271 62-105 (390)
9 2rpa_A Katanin P60 ATPase-cont 20.3 1.1E+02 0.0038 26.8 4.6 23 331-353 20-42 (78)
10 3hq2_A Bacillus subtilis M32 c 20.1 1.1E+03 0.036 27.5 14.4 168 218-405 37-222 (501)
No 1
>2a2f_X Exocyst complex component SEC15; all helical structure, protein transport; 2.50A {Drosophila melanogaster}
Probab=96.81 E-value=0.0045 Score=68.77 Aligned_cols=103 Identities=11% Similarity=0.138 Sum_probs=75.8
Q ss_pred HHHHHHHHHHhhhHhHHHHHhhhcccCCCcCCCCCCCCccchHHHHHHHHHHHHHHHhhccchhhHHHHHHHHHHHHHHH
Q 002022 824 EEKVLEQYTFAKANLIRTAATTFLLDSGVQWGAAPAVKGVRDVAVELLHTLVAVHAEVFAGAKPLLDKTLGILVEGLIDT 903 (979)
Q Consensus 824 D~~Lfe~Y~~~K~~~l~~~ie~gil~~g~dW~~~p~P~~VRpYvyE~Ll~LV~VHAEV~t~a~~Ll~rvLs~Lve~la~e 903 (979)
+.+||+. +..|.|-+..+ ..+||.+..+|++.++|+.+++..|=.+=+-..-..+.+...++-.-+..+|+.
T Consensus 186 e~~I~~~-v~~KIDdfl~l-------a~yDW~~~~~~~~ps~yi~dli~fL~~~f~sl~~LP~~v~~~~~~~a~~his~~ 257 (325)
T 2a2f_X 186 EKQVGLR-ICSKIDEFFEL-------SAYDWLLVEPPGIASAFITDMISYLKSTFDSFAFKLPHIAQAACRRTFEHIAEK 257 (325)
T ss_dssp HHHHHHH-HHHHHHHHHTT-------CCTTCC----CCSCCHHHHHHHHHHHHHHHTTTTTSHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHH-HHHHHHHHHHh-------cccCCCCCCCCCCccHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHH
Confidence 5566665 47777777644 479999999999999999999999888777333345567788888888999999
Q ss_pred HHHhhchhccccccccCcchhHHHHhhHHHHHHh
Q 002022 904 FLSLFDENQSNNLKSLDANGFCQLMLEVVYNVLI 937 (979)
Q Consensus 904 lL~~f~~~~~~~v~~f~~~G~lQAtLeiefi~q~ 937 (979)
++..+-.. .|++|+++|+.|..+||.|+.+.
T Consensus 258 l~~~Ll~~---~vk~in~~av~~~~~Dv~~lE~f 288 (325)
T 2a2f_X 258 IYSIMYDE---DVKQISTGALTQINLDLMQCEFF 288 (325)
T ss_dssp HHHHHTC---------CCTTHHHHHHHHHHHHHH
T ss_pred HHHHhcCc---chhhcCHHHHHHHHHHHHHHHHH
Confidence 99988742 69999999999999999999887
No 2
>2d2s_A Exocyst complex component EXO84; tethering complex, EXO84P, endocytosis/exocytosis complex; 2.85A {Saccharomyces cerevisiae} SCOP: a.118.17.2
Probab=94.33 E-value=0.11 Score=55.06 Aligned_cols=197 Identities=13% Similarity=0.136 Sum_probs=136.9
Q ss_pred HHHHHHhcCchhhHhhhhcCChHHHHHHHHHhhhhccC-------cchhHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCh
Q 002022 318 QRFRTLFNLPSTIRGSISKGEFDLAVREYKKAKSIALP-------SHVNILKRVLEEVEKVMQEFKAMLYKSMEDPHIDL 390 (979)
Q Consensus 318 ~R~kfLFeLP~~L~~~I~~gdYe~aV~dY~kAk~L~~~-------~~v~vf~kV~~EVE~ii~~~k~~L~~kL~~~~~s~ 390 (979)
+..+++-++|..|.-+|...+|+.||.--.+++.++.. .+.....-+-.-|++....+...|-+.|.. +...
T Consensus 13 ~~~~wl~~~~deLDv~IA~r~feeAv~lle~~~~~l~~~~~~~~~~~~~~~~~l~~ki~eR~~~L~~~L~~~l~~-~~~~ 91 (235)
T 2d2s_A 13 QRLKFLDEGVEEIDIELARLRFESAVETLLDIESQLEDLSERISDEELMLLNLISLKIEQRREAISSKLSQSILS-SNEI 91 (235)
T ss_dssp HHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTC-------CHHHHHHHHHHHHHHHHHHHHHHHHHHT-CSSH
T ss_pred hhHHHHHcccHHHHHHHHHHhHHHHHHHHHHHHHHHHhCcccccccchHHHHHHHHHHHHHHHHHHHHHHHHHHh-cCCH
Confidence 44678888999999999999999999999999987642 223445667777888888888888888855 6678
Q ss_pred hHHHHHHHHHhcCCCCCChHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHhhhccCCCccccc
Q 002022 391 TNLENTVRLLLELEPESDPVWHYLNVQNHRIRGLFEKCTLDHEARMETLHNELHERAMSDARWLQIQQDLNQSSGADYSV 470 (979)
Q Consensus 391 ~e~~~lI~lLleL~~~~dPiw~~L~sq~~~I~~~le~~~~~~~~k~e~l~~~l~~~~~s~~~~~~l~~~~~~~~~~~~~l 470 (979)
.+..+.|.+|..||-.+.-+-.||.++..+|+..+..+. . .
T Consensus 92 ~~~r~~v~~L~rLg~~~~A~~lfL~~rs~~i~~~~r~l~-------------------------------~---~----- 132 (235)
T 2d2s_A 92 VHLKSGTENMIKLGLPEQALDLFLQNRSNFIQDLILQIG-------------------------------S---V----- 132 (235)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHCC------------------------------------C-----
T ss_pred HHHHHHHHHHHHCCChhHHHHHHHHHHHHHHHHHHHHhc-------------------------------c---c-----
Confidence 899999999999999888888899888888777664320 0 0
Q ss_pred ccCCCCCCCCCCCCCChhhHHHHHHHHHHHHHHHHHhchHHHHHHHHHhhcCccccccCC-CccCcccccCchhhhhhcc
Q 002022 471 TCGNIQPIDSLPVELSGEEVDAFRGRYIRRLTAVLIHHIPAFWKVALSVFSGKFAKSSQV-SSESNLNASGNKAEEKVGE 549 (979)
Q Consensus 471 ~~~~~~~~~~~~~~~~~~ev~~~~~~fv~~L~~vil~~lp~FWklaqs~~~Gk~~k~~~~-~~~~~s~s~~~~~~~~l~~ 549 (979)
+ + ...|+..|+.+.-+.+-+ +++.|.. -| +. + +.
T Consensus 133 -g------d--------------~~~Yi~~Ls~i~Fs~I~~---t~~~f~~-~F----~~~~------~~---------- 167 (235)
T 2d2s_A 133 -D------N--------------PTNYLTQLAVIRFQTIKK---TVEDFQD-IF----KELG------AK---------- 167 (235)
T ss_dssp -C------S--------------HHHHHHHHHHHHHHHHHH---HHHHHHH-HS----TTCC------HH----------
T ss_pred -C------C--------------HHHHHHHHHHHHHHHHHH---HHHHHHH-Hh----CCCC------cc----------
Confidence 0 0 336777777774333322 2222211 01 11 0 00
Q ss_pred cccccccHHHHHHHHHHHHHHHHhhhhhhccCCccCccchHHHHHHHHHHHHHHHhhccccC
Q 002022 550 GKYSIHSLDEVAGMIRNTISVYEIKVHNTFNDLEDSNILRSYMRDAIEEISKACQAFEAKES 611 (979)
Q Consensus 550 ~~~~~~~~~e~~~mi~e~i~~y~~~l~~~f~~l~~~n~~~~yL~~~l~~i~~~~~~L~~~~~ 611 (979)
-...|+.+..+-+..|.+.+.--.+. + .. . |- +|+..+..-|..|..+|-
T Consensus 168 ------~~S~lV~Wa~~eve~f~~l~~rqv~~-~-~~-l--~~-ecv~i~~~~~~~L~~vGL 217 (235)
T 2d2s_A 168 ------ISSILVDWCSDEVDNHFKLIDKQLLN-D-EM-L--SP-GSIKSSRKQIDGLKAVGL 217 (235)
T ss_dssp ------HHHHHHHHHHHHHHHHHHHHHHHTTC------C--CH-HHHHHHHHHHHGGGGGTC
T ss_pred ------cccHHHHHHHHHHHHHHHHHHHHccC-C-cc-H--HH-HHHHHHHHHHHHHHHcCC
Confidence 14578999999999999988554432 2 22 2 22 899999988989988855
No 3
>2fji_1 Exocyst complex component SEC6; exocytosis, tandem helical bundles, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=85.62 E-value=51 Score=36.97 Aligned_cols=74 Identities=12% Similarity=0.088 Sum_probs=60.4
Q ss_pred CcCCCCCCCCccchHHHHHHHHHHHHHHHh-hccchhhHHHHHHHHHHHHHHHHHHhhchhccccccccC---cchhHHH
Q 002022 852 VQWGAAPAVKGVRDVAVELLHTLVAVHAEV-FAGAKPLLDKTLGILVEGLIDTFLSLFDENQSNNLKSLD---ANGFCQL 927 (979)
Q Consensus 852 ~dW~~~p~P~~VRpYvyE~Ll~LV~VHAEV-~t~a~~Ll~rvLs~Lve~la~elL~~f~~~~~~~v~~f~---~~G~lQA 927 (979)
-.|...+ +|..++.++--.-... ..+.|++...++..+.+.+.-+.++++.. + .+|. ..|..|-
T Consensus 212 ~~W~~~~-------~v~~i~~ti~dy~~d~~~~L~~~~~~~l~~~~~~~~v~~Yl~~l~~-~----~~~~~~~~~~~~~l 279 (399)
T 2fji_1 212 KTWYMGS-------QAQQIADTLDEYLLDIKPQMNSVLFVNFIDNVIGETIIKFLTALSF-E----HSFKNKNNKFLEAM 279 (399)
T ss_dssp GGGTTCC-------HHHHHHHHHHHHHHHHGGGSCHHHHHHHHHHHHHHHHHHHHHGGGG-C----CCCCCGGGHHHHHH
T ss_pred chhcCCc-------HHHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHHhc-C----CCCCchhHHHHHHH
Confidence 4897754 7888888888777777 78899999999999999999999999975 3 2566 8899999
Q ss_pred HhhHHHHHHh
Q 002022 928 MLEVVYNVLI 937 (979)
Q Consensus 928 tLeiefi~q~ 937 (979)
.-|++-+...
T Consensus 280 ~~D~~~l~~~ 289 (399)
T 2fji_1 280 KRDFEIFYQL 289 (399)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 9998877655
No 4
>3fhn_A Protein transport protein TIP20; TIP20P, vesicle tethering, endoplasmic reticulum, ER-golgi transport, membrane, phosphoprotein; 3.00A {Saccharomyces cerevisiae}
Probab=76.52 E-value=15 Score=44.54 Aligned_cols=118 Identities=12% Similarity=0.144 Sum_probs=89.9
Q ss_pred HHHHHHHHHHHHHH-HHHHHHHhhhHhHHHHHhhhcccCCCcCCCCCCC--------CccchHHHHHHHHHHHHHHHhhc
Q 002022 813 IQDLVMSFSGLEEK-VLEQYTFAKANLIRTAATTFLLDSGVQWGAAPAV--------KGVRDVAVELLHTLVAVHAEVFA 883 (979)
Q Consensus 813 ir~~~~~l~qLD~~-Lfe~Y~~~K~~~l~~~ie~gil~~g~dW~~~p~P--------~~VRpYvyE~Ll~LV~VHAEV~t 883 (979)
-.++...+..|-.+ +.+.++..=...+....++|+-.+ .|..-+.| -.+.+-.-++|..|.--=+...+
T Consensus 504 FDetIs~Y~~L~~~~~~~~Iv~~v~~eik~~lK~Y~k~s--~W~s~~~~~~~~~~~~lspSaEL~~~L~~L~~~L~~L~~ 581 (706)
T 3fhn_A 504 FQNVENDYEKAMSTDMQNSIVHRIQKLLKETLRNYFKIS--TWSTLEMSVDENIGPSSVPSAELVNSINVLRRLINKLDS 581 (706)
T ss_dssp THHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTHHHHHCC--GGGTCCCC------CCCCCCGGGHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcc--cCcccCCCCcccccccCCCCHHHHHHHHHHHHHHHHHHH
Confidence 44566778888888 999999999999999999988743 89865532 23577778888877766666655
Q ss_pred c--chhhHHHHHHHHHHHHHHHHHHhhchhccccccccCcchhHHHHhhHHHHHHh
Q 002022 884 G--AKPLLDKTLGILVEGLIDTFLSLFDENQSNNLKSLDANGFCQLMLEVVYNVLI 937 (979)
Q Consensus 884 ~--a~~Ll~rvLs~Lve~la~elL~~f~~~~~~~v~~f~~~G~lQAtLeiefi~q~ 937 (979)
. ++.+..+|-..+++.+..-+.+-.=. ..+|+.+|+.|...|++.+-.+
T Consensus 582 ~lL~~~~f~~IwR~ia~~Ld~yL~e~IL~-----~nkFS~~Ga~Qf~~D~~~L~~v 632 (706)
T 3fhn_A 582 MDIPLAISLKVKNELLNVIVNYFTESILK-----LNKFNQNGLNQFLHDFKSLSSI 632 (706)
T ss_dssp SCCCHHHHHHHHHHHHHHHHHHHHHTTTT-----TSCBCHHHHHHHHHHHHHHHTT
T ss_pred ccCCHHHHHHHHHHHHHHHHHHHHHHHHh-----cCccCHHHHHHHHHHHHHHHHH
Confidence 4 77777888888888887777665443 2499999999999999998754
No 5
>1q0v_A Hydrophilic protein; has cysteine rich putative zinc finger esential for function;...; stable, non-interacting alpha-helices; NMR {Saccharomyces cerevisiae} SCOP: j.105.1.1 PDB: 1q0w_A
Probab=43.77 E-value=26 Score=31.10 Aligned_cols=15 Identities=33% Similarity=0.581 Sum_probs=11.2
Q ss_pred CCccHHHHHHHHHHH
Q 002022 3 SDSDEDELLQMALKE 17 (979)
Q Consensus 3 ~~~~~~~~~~~~~~~ 17 (979)
-++|+||=|.+||+=
T Consensus 7 ~~~~eDeDLkrAieL 21 (81)
T 1q0v_A 7 TPEDEEELIRKAIEL 21 (81)
T ss_dssp CCSSHHHHHHHHHHH
T ss_pred cccCchHHHHHHHHH
Confidence 467788888888753
No 6
>3n1e_A Vacuolar protein sorting-associated protein 54; spinal muscular atrophy, vesicle trafficking, golgi apparatu tethering complex, GARP.; 1.70A {Mus musculus} PDB: 3n1b_A
Probab=35.29 E-value=2e+02 Score=28.02 Aligned_cols=78 Identities=5% Similarity=0.011 Sum_probs=55.0
Q ss_pred cCCCCCCCCccchHHHHHHHHHHHHHHHhhccchh-hHHHHHHHHHHHHHHHHHHhhchhccccccccCcchhHH--HHh
Q 002022 853 QWGAAPAVKGVRDVAVELLHTLVAVHAEVFAGAKP-LLDKTLGILVEGLIDTFLSLFDENQSNNLKSLDANGFCQ--LML 929 (979)
Q Consensus 853 dW~~~p~P~~VRpYvyE~Ll~LV~VHAEV~t~a~~-Ll~rvLs~Lve~la~elL~~f~~~~~~~v~~f~~~G~lQ--AtL 929 (979)
+|+..+ ..+.||+-.+.=.++--|-=++.+-|+ -+.-|+..+....-+.+-++|..- .=-+-+|--. .+=
T Consensus 42 ~Wd~k~--pvpS~~m~tl~Ke~~kLH~~Ls~~LP~~~v~~Im~~Vf~~fk~~l~~~~~~~-----~i~~~~G~q~g~v~~ 114 (141)
T 3n1e_A 42 KYEVKA--PVPSPCFRNICKQMTKMHEAIFDLLPEEQTQMLFLRINASYKLHLKKQLSHL-----NVINDGGPQNGLVTA 114 (141)
T ss_dssp TCCCCS--SSSCHHHHHHHHHHHHHHHHHTTTSCHHHHHHHHHHHHHHHHHHHHHHHHHT-----TCCSSSSHHHHHHHH
T ss_pred HhccCC--CCCCHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHHHHHHHHHc-----CCCCCCcccchHHHH
Confidence 898743 368999999999999999999988655 666667777777777777777642 1222333332 567
Q ss_pred hHHHHHHh
Q 002022 930 EVVYNVLI 937 (979)
Q Consensus 930 eiefi~q~ 937 (979)
|++|+...
T Consensus 115 Dv~ff~~~ 122 (141)
T 3n1e_A 115 DVAFYTGN 122 (141)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 99998754
No 7
>3dwc_A TCMCP-1, metallocarboxypeptidase; cowrin family of metallocarboxypept carboxypeptidase, hydrolase; 2.10A {Trypanosoma cruzi}
Probab=32.61 E-value=6.4e+02 Score=29.39 Aligned_cols=130 Identities=10% Similarity=0.202 Sum_probs=72.0
Q ss_pred hhHHHHHHHhhhhcCCCCCCCchhHHhhHHHHHHHHHhhhhhHHHhHHHHHHHHHHHHHHHHHHHHhcCchhhHhhhhc-
Q 002022 258 TTIDDIESKLKRIEEDPEGSGTAHLFKLMQGVSSQANRAFEPLFERQAQAEKIRSVQGMLQRFRTLFNLPSTIRGSISK- 336 (979)
Q Consensus 258 dTId~m~~~mk~~e~~~~~~~t~~L~~~L~~i~~~a~~i~~pLle~r~Ka~kLr~~l~~L~R~kfLFeLP~~L~~~I~~- 336 (979)
..|+.|+.+.+....-+ .+|...+..+.+.|..+... +.+-..-..+.-.++.+++|-......+..
T Consensus 82 a~lr~~~r~~~~~~~iP-----~elv~~~~~~~s~~~~~W~~-------Ar~~nDf~~F~P~L~~vv~l~re~A~~~~~~ 149 (505)
T 3dwc_A 82 ANLREMRRAWELENLLP-----EEFVERKTVLTTKAHQVWKT-------CREKNDFAGFLPTLKELIALFREEGKLRAGN 149 (505)
T ss_dssp HHHHHHHHHHHHHHSSC-----HHHHHHHHHHHHHHHHHHHH-------HHHHTCHHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHhCCC-----HHHHHHHHHHHHHHHHHHHH-------HHHhCCHHHHHHHHHHHHHHHHHHHHHcCcc
Confidence 45666666665533222 23667777766666664332 111112223334445566666666666553
Q ss_pred ---CChHHHHHHHHHhhhhccCcchhHHHHHHHHHHHHHHHHHHHHHHhhc---------CCCCChhHHHHHHHHHhcC-
Q 002022 337 ---GEFDLAVREYKKAKSIALPSHVNILKRVLEEVEKVMQEFKAMLYKSME---------DPHIDLTNLENTVRLLLEL- 403 (979)
Q Consensus 337 ---gdYe~aV~dY~kAk~L~~~~~v~vf~kV~~EVE~ii~~~k~~L~~kL~---------~~~~s~~e~~~lI~lLleL- 403 (979)
.-||..+++|..+-.. .-+..||.++..-+-.+..++.++-. ..+.+.+.|+++.+.+++.
T Consensus 150 ~~~~pYDaLLd~yEpg~t~------~~ld~iF~~lk~~L~~Ll~~i~~~~~~~~~~~~~~~~~~~~~~Q~~l~~~~l~~l 223 (505)
T 3dwc_A 150 SGKHPYEALVDIYEPGMTL------QRLDEIFGNVRSWLPELLKEVQEKQKALGETVLEPKGPFPVSKQEALCRFFMDVW 223 (505)
T ss_dssp SCCCHHHHHHHHHSTTCCH------HHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCCCCCCCCCCHHHHHHHHHHHHHHT
T ss_pred cCCCcHHHHHHhhCCCCCH------HHHHHHHHHHHHHHHHHHHHHHhccccCCCCccccCCCCCHHHHHHHHHHHHHHc
Confidence 3499999999764433 33556666666555555555543321 2345668888888765554
Q ss_pred CC
Q 002022 404 EP 405 (979)
Q Consensus 404 ~~ 405 (979)
|.
T Consensus 224 Gf 225 (505)
T 3dwc_A 224 KF 225 (505)
T ss_dssp TC
T ss_pred CC
Confidence 54
No 8
>1deq_A Fibrinogen (alpha chain); coiled-coil, blood clotting; 3.50A {Bos taurus} SCOP: i.9.1.1
Probab=27.91 E-value=2.4e+02 Score=31.73 Aligned_cols=44 Identities=7% Similarity=0.087 Sum_probs=31.7
Q ss_pred HHHHHHHHHhhhHHHHHHHHhhhhhhHhhhhhHHHHHHHhhhhc
Q 002022 228 ALALKTDLKGRTQQRKQLVKDNFDCFVSCKTTIDDIESKLKRIE 271 (979)
Q Consensus 228 l~~L~r~I~~~~~~LK~LV~eNf~kFI~akdTId~m~~~mk~~e 271 (979)
...+...|+.+...|..+-..|=+.|.-.+.+.+.++..+++..
T Consensus 62 er~~~~rIe~L~~~L~~~s~s~~~~~~y~~~~~~~lk~~~~q~~ 105 (390)
T 1deq_A 62 DQDFTSRINKLRDSLFNYQKNSKDSNTLTKNIVELMRGDFAKAN 105 (390)
T ss_pred hhhHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHhhc
Confidence 45566677777777777777777777777777777777776643
No 9
>2rpa_A Katanin P60 ATPase-containing subunit A1; AAA ATPase, ATP-binding, cell cycle, cell division, cytoplas hydrolase, microtubule; NMR {Mus musculus}
Probab=20.34 E-value=1.1e+02 Score=26.79 Aligned_cols=23 Identities=22% Similarity=0.228 Sum_probs=18.8
Q ss_pred HhhhhcCChHHHHHHHHHhhhhc
Q 002022 331 RGSISKGEFDLAVREYKKAKSIA 353 (979)
Q Consensus 331 ~~~I~~gdYe~aV~dY~kAk~L~ 353 (979)
|++.-.|+||.++-.|..+....
T Consensus 20 Re~Al~GnYdta~~yY~g~~~qI 42 (78)
T 2rpa_A 20 REYALLGNYDSAMVYYQGVLDQM 42 (78)
T ss_dssp HHHHHHTCCHHHHHHHHHHHHHH
T ss_pred HHHHHhcChHHHHHHHHHHHHHH
Confidence 45666799999999999987743
No 10
>3hq2_A Bacillus subtilis M32 carboxypeptidase; hydrolase, metal-binding, metalloprotease, protease, zinc; 2.90A {Bacillus subtilis} SCOP: d.92.1.0
Probab=20.07 E-value=1.1e+03 Score=27.49 Aligned_cols=168 Identities=13% Similarity=0.136 Sum_probs=87.8
Q ss_pred CCCHHHHHHHHHHHHHHHHhh--hHHHHHHHHh------hhhhhHhhhhhHHHHHHHhhhhcCCCCCCCchhHHhhHHHH
Q 002022 218 NTSSADLEAGALALKTDLKGR--TQQRKQLVKD------NFDCFVSCKTTIDDIESKLKRIEEDPEGSGTAHLFKLMQGV 289 (979)
Q Consensus 218 ~tS~~dL~~gl~~L~r~I~~~--~~~LK~LV~e------Nf~kFI~akdTId~m~~~mk~~e~~~~~~~t~~L~~~L~~i 289 (979)
..+.+.=...+..|...+.++ +..+..++.. +.+-. .+..|+.|+.+.+....-+ .+|...+..+
T Consensus 37 ~~g~~~R~e~~a~Ls~~~h~~~t~~~~~~~l~~~~~~~~~l~~~--~~a~lr~~~r~~~~~~~iP-----~~lv~~~~~~ 109 (501)
T 3hq2_A 37 KNGSEDRAESIGQLSTDIFNIQTSDRMKELIDVLYERFDDLSED--TKKAVELAKKEYEENKKIP-----EAEYKEYVIL 109 (501)
T ss_dssp TTSHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHTGGGSCHH--HHHHHHHHHHHHHHHTTSC-----HHHHHHHHHH
T ss_pred CCchHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHhcccCCCHH--HHHHHHHHHHHHHHHhCCC-----HHHHHHHHHH
Confidence 333444444455555555544 3455555532 12221 2345666666666543322 3377777777
Q ss_pred HHHHHhhhhhHHHhHHHHHHHHHHHHHHHHHHHHhcCchhhHhhhh--cCChHHHHHHHHHhhhhccCcchhHHHHHHHH
Q 002022 290 SSQANRAFEPLFERQAQAEKIRSVQGMLQRFRTLFNLPSTIRGSIS--KGEFDLAVREYKKAKSIALPSHVNILKRVLEE 367 (979)
Q Consensus 290 ~~~a~~i~~pLle~r~Ka~kLr~~l~~L~R~kfLFeLP~~L~~~I~--~gdYe~aV~dY~kAk~L~~~~~v~vf~kV~~E 367 (979)
.+.|..+...- .+-..-..+.-.++.+++|-......+. ..-||..+++|..+-. ..-+..||.+
T Consensus 110 ~s~~~~~W~~A-------r~~nDf~~F~P~L~~vv~l~re~A~~~~~~~~pYDaLLd~yEpg~t------~~~ld~iF~~ 176 (501)
T 3hq2_A 110 CSKAETAWEEA-------KGKSDFSLFSPYLEQLIEFNKRFITYWGYQEHPYDALLDLFEPGVT------VKVLDQLFAE 176 (501)
T ss_dssp HHHHHHHHHHH-------HHTTCHHHHHHHHHHHHHHHHHHHHHHCCSSCTTHHHHHHHSTTCC------HHHHHHHHHH
T ss_pred HHHHHHHHHHH-------HHhCCHHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHhcCCCCC------HHHHHHHHHH
Confidence 66666543321 1111111222223334444444444433 2459999999976433 3446777777
Q ss_pred HHHHHHHHHHHHHHhhc-------CCCCChhHHHHHHHHHhcC-CC
Q 002022 368 VEKVMQEFKAMLYKSME-------DPHIDLTNLENTVRLLLEL-EP 405 (979)
Q Consensus 368 VE~ii~~~k~~L~~kL~-------~~~~s~~e~~~lI~lLleL-~~ 405 (979)
+..-+-.+..++.++=. ..+.+.+.|+++.+.+++. |.
T Consensus 177 Lk~~l~~Li~~i~~~~~~~~~~~l~~~~~~~~Q~~l~~~~l~~lGf 222 (501)
T 3hq2_A 177 LKEAIIPLVKQVTASGNKPDTSFITKAFPKEKQKELSLYFLQELGY 222 (501)
T ss_dssp HHHHHHHHHHHHHSSTTCCCCTTTSSCCCHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHHhcCCCCCccccCCCCCHHHHHHHHHHHHHHcCC
Confidence 77777777777654321 2244567888888766554 54
Done!