Query 002025
Match_columns 978
No_of_seqs 359 out of 1526
Neff 6.3
Searched_HMMs 46136
Date Thu Mar 28 14:49:03 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/002025.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/002025hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG4427 E3 ubiquitin protein l 100.0 2E-173 5E-178 1460.6 57.8 920 3-978 37-1096(1096)
2 KOG0942 E3 ubiquitin protein l 100.0 9E-144 2E-148 1251.4 60.0 923 3-978 36-1001(1001)
3 KOG0941 E3 ubiquitin protein l 100.0 4.7E-90 1E-94 802.3 32.1 532 404-977 275-849 (850)
4 COG5021 HUL4 Ubiquitin-protein 100.0 1.6E-87 3.4E-92 810.0 33.8 353 614-978 513-872 (872)
5 cd00078 HECTc HECT domain; C-t 100.0 7.2E-82 1.6E-86 714.4 32.9 348 617-976 2-352 (352)
6 smart00119 HECTc Domain Homolo 100.0 1.8E-78 3.9E-83 681.2 31.6 331 637-978 3-336 (336)
7 KOG0939 E3 ubiquitin-protein l 100.0 5.2E-78 1.1E-82 689.3 29.0 381 577-978 331-720 (720)
8 KOG0170 E3 ubiquitin protein l 100.0 2.9E-72 6.2E-77 620.7 27.1 393 573-978 164-621 (621)
9 PF00632 HECT: HECT-domain (ub 100.0 7E-65 1.5E-69 567.7 20.5 304 671-978 1-317 (317)
10 KOG0940 Ubiquitin protein liga 100.0 2E-50 4.3E-55 450.3 11.5 339 613-970 14-358 (358)
11 KOG0943 Predicted ubiquitin-pr 100.0 6.1E-36 1.3E-40 348.2 23.8 261 704-975 2739-3014(3015)
No 1
>KOG4427 consensus E3 ubiquitin protein ligase [Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=2.3e-173 Score=1460.64 Aligned_cols=920 Identities=31% Similarity=0.510 Sum_probs=810.5
Q ss_pred CCcccchhHHHHHHHHHHHHHHHHhhhccccc----cccccCchhHHHhHHhheeccCCcchHHHHHHHHHHHHHhhhcc
Q 002025 3 PSRYRGKKAMEIEHSKVREQFFATYGRHIQNV----NRQCFGPQSAFFRQLFFFFNARNVSDISVLVETCRLMKHFVQES 78 (978)
Q Consensus 3 ~~~~r~~~~~~~~~~~ir~~f~~~~~~~~~~~----~~~~~~p~~~~~r~~lf~f~~~~~~d~~rl~~~cr~l~~~~~~~ 78 (978)
|...||+-.++.+|.+|+++||.+|..+...- +| ...|-..++|.++++++... .|.+||+++||+|+.+|+++
T Consensus 37 q~~lrsyl~Rkk~~~~I~~e~d~~f~~d~~d~~~~~er-v~~~~l~var~ll~q~r~ie-~~~e~~~~iCr~il~smds~ 114 (1096)
T KOG4427|consen 37 QRVLRSYLVRKKAQIEIQEEFDNLFSCDSVDLTKVLER-VARPFLPVARSLLVQHRKIE-AREERLEQICRKILLSMDSE 114 (1096)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhhcCCcchHHHHHH-HhhhHHHHHHHHHHHHHHHH-hHHHHHHHHHHHHHHhhcCC
Confidence 44579999999999999999999999988541 22 23345569999999999772 33999999999999999999
Q ss_pred CCeeEEEEeeecccchhhh-HHHHHHHHHHHHHHHHhhchhhhhhccCCCCCCCCChhHHHHHHhhhccCCCcc------
Q 002025 79 GDVVGLFAGIDYSSKRALV-DFRVKKFAFACIQAVHQNRKELKDQLFVTPEESNTPPTLLLEAVVFLIDSRLPW------ 151 (978)
Q Consensus 79 ~~~~~~~~~~~~~~~~~l~-~~~iK~l~~~C~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~w------ 151 (978)
+|.+.+|++++++||..+. +.|||.+++.|++.|.+++||... | ++..++|||+||+|||||+ |
T Consensus 115 n~~~~sfvsl~l~ke~sk~w~~qik~ils~c~~lL~eln~Er~a------d--~~~~alll~~livfTdpks-Wkilrn~ 185 (1096)
T KOG4427|consen 115 NDQKYSFVSLALGKEDSKTWICQIKRILSLCSFLLTELNPERIA------D--SIVNALLLHILIVFTDPKS-WKILRNE 185 (1096)
T ss_pred CCcceeeeeehhcccchHHHHHHHHHHHHHHHHHHHhcCHHHHH------H--HHHHHHHHHeeeEEeCCcc-eeehhcc
Confidence 9999999999999999999 999999999999999999999999 7 7788999999999999999 9
Q ss_pred ------------hhHHHHHHHhhhHHHHHHHHHHhcCCccccccccCCccchhhhhhhhccccCCCCcccccCCCCc---
Q 002025 152 ------------TCKVVSYLLERNVFTLLRELIVTGKESMEIHSSYGRISSLERVLTLIIPHIGQKPCICPNIDPRW--- 216 (978)
Q Consensus 152 ------------~~~i~~~l~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~~~~~--- 216 (978)
|+|||||+.|.|||+.||..|.+|+.+.++| + ++.++.|.+++ |+||+++|+|
T Consensus 186 n~e~lqtamn~ic~~i~gh~~q~~~Ys~mr~~l~~~t~~~~~~--l-~~~Tl~a~~sl---------~~rpvk~~nfsd~ 253 (1096)
T KOG4427|consen 186 NFEDLQTAMNIICQNIMGHLCQHGFYSAMRRYLKRGTKRTDPR--L-VITTLAATFSL---------RLRPVKQPNFSDN 253 (1096)
T ss_pred chhhhHHHHHHHHHHHHhhhcccchHHHHHHHHHHhccCCCcc--e-eeeehhhhhhh---------ccccccCCchHHH
Confidence 9999999999999999999999999999995 6 79999999999 9999999999
Q ss_pred ---hhhHhhhhhhHH-Hhhc---hhHHHHHhhCCchhhHHHHHhhhhccccccCCccccccccch--hhhhHHHHHHhhh
Q 002025 217 ---SFFSQILTIPFL-WHLF---PYIKEVFATGRTSQHYIHQMALCVQNHANVLPHEVSMELPGY--ACLLGNILETAGV 287 (978)
Q Consensus 217 ---~f~~~ilsiP~l-~~~~---~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~--~clL~N~~~~~~~ 287 (978)
-|.++|||||+| .|+. |-+.+.+.+++|++|.++. +.+-++. ++++...+|. +|+|||||++|++
T Consensus 254 l~~~fv~~IltvPaLv~hL~~~~~q~le~~ss~~l~~K~l~~-----l~d~~~~-ee~~tsme~~~~l~llgNiv~la~i 327 (1096)
T KOG4427|consen 254 LVEEFVSLILTVPALVCHLPSALPQALEHLSSLMLLDKILNI-----LRDMENS-EEQSTSMEGPSVLWLLGNIVHLATI 327 (1096)
T ss_pred HHHHHHHHHhchhHHHHhcchhhHHHHHHHHHHHHHHHHHHH-----HHhhHhH-HHhhcCCcccHhHHHHhhhheeeec
Confidence 899999999999 9997 7799999999999999999 8888888 8887766655 9999999999954
Q ss_pred hccCCCchhhhh-hhHHHHHHHHHhhCCCcccc---CCC--------CCCCCCCccCCCCCccccchhHHHHHHHHhhhh
Q 002025 288 ALSQPDCSFEMG-VDLAAITTFLLKALPPIKSS---RES--------SMVSDDDMTAGDEVMEPVINRDLEKQITSAIDS 355 (978)
Q Consensus 288 ~~~~~~~~~~~~-~~~~~v~t~lL~~l~~~~~~---~~~--------~~~~~~~~~~~~~~~~~~~~~~l~~Ql~~~~~~ 355 (978)
.+...+++. -.|....++-|.+|-.++++ +.+ .-.+..-+.+.++.| +.+++|+..+|++
T Consensus 328 ---s~~~~e~~~~~~f~~~~~~sl~~~~e~tv~~~tk~~l~~wH~vlg~~s~~~ek~~n~~i-----~~v~~q~~mlw~~ 399 (1096)
T KOG4427|consen 328 ---SETDLEDELESNFYVLYTHSLVTLAENTVSQVTKVGLTDWHPVLGWTSNETEKGNNVKI-----SLVEKQLPMLWQW 399 (1096)
T ss_pred ---CcccccccccccchhhhHHHHHHHHHHHhhcccccceeeeehhhccccCCCCCccchhH-----HHHHHHHHHHhhh
Confidence 444444544 44888888888888888776 222 112222236666666 6899999999999
Q ss_pred HHHHHHHHHH----------------------------hhhccccCC-----C-----------CCCCCCchHHHHHHHH
Q 002025 356 RFLLQLTNVL----------------------------FSGFHLLRG-----P-----------HDEGPGDKEVAAVGAA 391 (978)
Q Consensus 356 ~~~~~l~~~l----------------------------f~~~~~~~~-----~-----------~~~g~~~~~~~~v~~v 391 (978)
|++|.++..+ ++++++.++ . ++.-.++++|..|+.+
T Consensus 400 ~likll~~dile~~~las~~~~~~sk~s~~~~l~Is~l~sr~lrk~~~~~~~l~~v~ss~~~~~~~k~~s~~~v~lv~~i 479 (1096)
T KOG4427|consen 400 RLIKLLFGDILEIRVLASKDASTSSKKSPETLLDISRLLSRALRKSCVMGPVLGPVPSSNMLSFCPKWNSSAEVLLVENI 479 (1096)
T ss_pred hHHHHHhhhHHHhhhhccccccccCCCCCcchhHHHHHHHHHHHHhcccCCccCCCccchhhhccccccCcccceehhhh
Confidence 9999888733 333222100 0 2222578999999999
Q ss_pred HHHHHHhhccchh--HHHHHHhhhhhhhHHHHHHHHHhhccccccC--CC----------CC---CCCC---CCCCcchh
Q 002025 392 CAFLHVAFNTLPL--ECIMTVLAYRTELVQLLWHYMKRCHEIRKWP--FL----------PY---LSGD---APGWLLPL 451 (978)
Q Consensus 392 C~~~~~~l~tl~~--~~iL~~Laf~~~Ll~~LW~~I~~~~~~~~l~--sL----------~~---ls~d---~~~lllpL 451 (978)
|..|+++++|+.+ ..+++|++|.+++++++|.+|+..+++.+-. |- +. +.++ +.....+|
T Consensus 480 C~~y~aslnTl~~mr~~iltgl~~~dnll~~lW~~i~e~G~~~G~~~gs~~~~~~~k~~~ev~~~l~s~~~~sk~~tamL 559 (1096)
T KOG4427|consen 480 CTAYDASLNTLWQMRLPILTGLCYLDNLLVNLWVNILELGPSPGPQPGSGQVNESTKDVLEVETLLGSPTGISKPVTAML 559 (1096)
T ss_pred hhHHHhhhhhHHHhhhHHhhcchhhhhhHHHHHHHHHHhCCCCCCCCCccccchhHHHHHhHHHHhCCCCCCCchHHHHH
Confidence 9999999999987 4899999999999999999999999887722 11 11 1111 12356788
Q ss_pred hhhhhhHhHHhhhccchhhhccCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCccCCCCCCCCCCchHHHhhhhh
Q 002025 452 AVFCPVYKHMLTIVDNEEFYEQEKPLSLKDIRHLIVILREALWHLLWLNPTSHPNVGKSVSSPPPANKMLPAEAIQHRVS 531 (978)
Q Consensus 452 ~lfc~l~s~~L~ildDeEf~~~~~p~~l~el~~l~~~Lk~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 531 (978)
.|||++|.|.++|+||+|||+.|.||+++++.+++.+||.++|++||.+....+ + ....-++
T Consensus 560 ~LFcdc~ahlitILDd~e~yekq~pF~lee~~~i~s~lN~~vyk~i~~g~v~ea-------------k-----~~t~~lF 621 (1096)
T KOG4427|consen 560 MLFCDCYAHLITILDDIEFYEKQVPFKLEELVRIASFLNTFVYKGIWDGTVPEA-------------K-----QLTTGLF 621 (1096)
T ss_pred HHHHHHHHHHHHHhhHHHHHhhcCCchHHHHHHHHHHHHHHHHHHHHcccchhh-------------h-----hHHHHHH
Confidence 999999999999999999999999999999999999999999999997533211 1 1112278
Q ss_pred HHHHHHHHHHhhhhccCcCCCCCCccccccc-hhhhhhhhccccchhhhhhcCCcccchhhHHHHHHHHHHHHHHhcCC-
Q 002025 532 TVASEVLSQLQDWNNRREFVPPSDFHADGVN-DFFISQATIDGTRANEILKQAPFLVPFTSRAKIFQSQLASVRQRHGS- 609 (978)
Q Consensus 532 ~~~~~lL~~L~~~n~r~~f~p~~~f~~~~~~-~~~~~~~~~~~~~~~~il~~~Pfl~pf~~Rv~if~~~l~~~r~~~~~- 609 (978)
.+++++|..||+|||||+|+|+++|+++++. ..+....+....++..++..+|+++|+++||.+||.++.+++...+.
T Consensus 622 ~S~h~~l~vLYeRDcRr~Fta~d~WL~pevkPs~f~~e~ek~~~~a~lll~~mpHviP~edRv~lFR~fVqkdKa~~~lv 701 (1096)
T KOG4427|consen 622 DSAHRLLHVLYERDCRRPFTASDHWLIPEVKPSAFAAELEKVLPTADLLLTKMPHVIPHEDRVLLFREFVQKDKASRGLV 701 (1096)
T ss_pred HHHHHHHHHHHHhccCCCCCcchhhcCCCCChhHHHHHHHhhcccceeEeccCCcccChHHHHHHHHHHHhhhHHhhccc
Confidence 8999999999999999999999999998774 34544444555667788999999999999999999999888865432
Q ss_pred ---CCCcce-eeEEEeCCchHHHHHHHHhcCCccccCccEEEEEEeccCcccccccCCCchHHHHHHHHHHhhcccCCCc
Q 002025 610 ---HGVFTR-SRFRIRRDHILEDAYSQMSTMSEEDLRGAIRVTFVNELGVEEAGIDGGGIFKDFMENITRAAFDVQYGLF 685 (978)
Q Consensus 610 ---~~~~~r-~~i~VrR~~ileDa~~~L~~~~~~~lk~~L~V~F~~E~G~~E~GiD~GGv~REFf~~l~~e~fdp~~gLF 685 (978)
.....+ ..|+|||++|+||+|+||++.+...+|+.++|+|+||+|++|||||.|||+|||++++.|.+|||+++||
T Consensus 702 ~ts~a~p~~~t~IvvrR~rivEDGf~qL~~l~~~alKs~IrVkFVNeqGl~EAGiDqdGvfKEFLeeiiKkvFdp~lnLF 781 (1096)
T KOG4427|consen 702 ETSDASPARSTEIVVRRGRIVEDGFQQLNSLGSPALKSVIRVKFVNEQGLDEAGIDQDGVFKEFLEEIIKKVFDPELNLF 781 (1096)
T ss_pred ccccCCccceeEEEEEcccchhhHHHHHHhccchhhhceEEEEEecccCCcccccCccchHHHHHHHHHHHHhccccccc
Confidence 112223 5899999999999999999999889999999999999999999999999999999999999999999999
Q ss_pred eecC-CCceecCCCCCCchhhHHHHHHHHHHHHHHHHHcCCcccccCcHHHHHhhhccCC--CCCCCCCCCHHHHHHHHH
Q 002025 686 KETS-DHLLYPNPGSGMIHEQHLQFFHFLGILLAKAMFEGILVDIPFATFFLSKLKQKYN--YLNDLPSLDPELYRHLIF 762 (978)
Q Consensus 686 ~~t~-~~~lypnp~s~~~~~~~l~~f~flG~llGkAL~~g~~ldl~fa~~f~k~Llg~~~--tl~DL~~lDp~l~~sL~~ 762 (978)
..|+ |+.+||+|.|+ .+++|+++|+|+||++|||+|+|+++|+||+++|+.+|+|... .+|+|.++|||+||||.+
T Consensus 782 stTs~d~~LyPSPts~-~~en~lqlfeFvGrmlGKAvYEGIvvDv~fa~vflsqlLG~~~~s~~DELs~LDpElYrnLtf 860 (1096)
T KOG4427|consen 782 STTSTDRRLYPSPTSY-HHENHLQLFEFVGRMLGKAVYEGIVVDVPFASVFLSQLLGRHSLSFIDELSSLDPELYRNLTF 860 (1096)
T ss_pred ccCCCCceecCCchhh-hhhchhHHHHHHHHHHHHHHhcceEEecccHHHHHHHHhcccchhhhhhccccCHHHHhhhhH
Confidence 9988 99999999997 7899999999999999999999999999999999999999876 799999999999999999
Q ss_pred HhhccCccccceeeEEEEeccCCcceeeeccCCCcccccChhhHHHHHHHHHHHHHhhhHHHHHHHHHhhcccccchhHH
Q 002025 763 LKHYEADISELELYFVILNNEYGEQTEEELLPGGKNIRVTNENVITFIHLVSNHRLNFQIRQQSSHFLRGFQQLIQKDWI 842 (978)
Q Consensus 763 Lk~~~~dvedL~L~Ftv~~~~~g~~~~veLip~G~~i~VT~eNk~eYI~l~~~~~l~~~i~~q~~aF~~Gf~~Vip~~~L 842 (978)
+|+|+||+.||+|||+++++..|+..++||+|||+.|+||+|||.+|||.||+|++|+|+++|..||.+||+++|.++|+
T Consensus 861 vKhYdgd~~dL~LtfSvdedfmGkis~~eL~PgGkt~sVtneNKi~YIH~MA~~rmnrqi~eqt~Af~rG~rsii~P~Wl 940 (1096)
T KOG4427|consen 861 VKHYDGDLKDLCLTFSVDEDFMGKISTIELKPGGKTISVTNENKIQYIHAMAHFRMNRQIVEQTNAFYRGFRSIISPEWL 940 (1096)
T ss_pred HHhhcccHhhheeeeEechhhccceeEEEeccCCcceeccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhcCHHHHHHhHcCCCCCCCHHHHhhcccccCCcCCCcHHHHHHHHHHhc-CCHHHHhhcceeecCcCCCCCCCcccCCC
Q 002025 843 DMFNEHELQLLISGSLDSLDFDDLRQNTNYVGGYHSEHYVIEMFWEVLKS-FSLENQKKFLKFVTGCSRGPLLGFKYLEP 921 (978)
Q Consensus 843 ~~F~p~EL~~Li~G~~~~iD~~dL~~~t~y~ggy~~~~~~I~~FWevl~~-fs~eer~kfL~FvTGssRlP~~Gf~~L~p 921 (978)
++|+|.|||.||+|...+||++||++||+|.|||+.+|++|+|||+++.. |++|||+.||||||+|||+|+.||++|+|
T Consensus 941 slFs~~elq~LiSG~nsdiDl~DLkrnt~Y~GGfh~shrvIkwlWdIl~~dFt~eERklfLKFVTSCSrpPlLGFayLeP 1020 (1096)
T KOG4427|consen 941 SLFSPPELQRLISGDNSDIDLDDLKRNTKYYGGFHDSHRVIKWLWDILAGDFTPEERKLFLKFVTSCSRPPLLGFAYLEP 1020 (1096)
T ss_pred HccCcHHHHHHhcCCCCCCCHHHHHhcCEeecccCCcchhHHHHHHHHhccCChHHHHHHHHHHhhcCCCccccccccCC
Confidence 99999999999999988999999999999999999999999999999965 99999999999999999999999999999
Q ss_pred ceeEeecCCCCC-------------------CcCCCCCceeccccCeeecCCCCCHHHHHHHHHHHHHcCCCccCC
Q 002025 922 LFCIQRAAGSAS-------------------EEALDRLPTSATCMNLLKLPPYRSKEQMSTKLLYAINAEAGFDLS 978 (978)
Q Consensus 922 ~f~I~~~~~~~~-------------------~~~~~rLPtA~TCfN~L~LP~Yss~e~LreKL~~AI~~~~GF~LS 978 (978)
+|.|+++..+++ .++.+|||||+||||+||||+|+.+.+|||||+|||.+++|||||
T Consensus 1021 pFsIrCVeVSdDqd~gdtiGSVvRGFfaiRKg~~~~RLPTaSTCfNlLKLPnY~kkStlreKLrYAIssntGFELS 1096 (1096)
T KOG4427|consen 1021 PFSIRCVEVSDDQDTGDTIGSVVRGFFAIRKGQPVERLPTASTCFNLLKLPNYKKKSTLREKLRYAISSNTGFELS 1096 (1096)
T ss_pred CceEEEEEecCcccchhhHhHHHHhhhhhhcCCccccCCchhhHHHhhhCCCcchhHHHHHHHHHHhhcCCCcccC
Confidence 999997653322 367889999999999999999999999999999999999999998
No 2
>KOG0942 consensus E3 ubiquitin protein ligase [Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=8.8e-144 Score=1251.43 Aligned_cols=923 Identities=39% Similarity=0.594 Sum_probs=741.7
Q ss_pred CCcccchhHHHHHHHHHHHHHHHHhhhccccccccccCchhH-HHhHHhheeccCCcchHHHHHHHHHHHHHhhhccCCe
Q 002025 3 PSRYRGKKAMEIEHSKVREQFFATYGRHIQNVNRQCFGPQSA-FFRQLFFFFNARNVSDISVLVETCRLMKHFVQESGDV 81 (978)
Q Consensus 3 ~~~~r~~~~~~~~~~~ir~~f~~~~~~~~~~~~~~~~~p~~~-~~r~~lf~f~~~~~~d~~rl~~~cr~l~~~~~~~~~~ 81 (978)
|||.||.|++...+..-|++||..+..+.++ ++.+ .+|+|.|||... .|.+||+++|.-|+--...- +
T Consensus 36 Qs~~Rg~~~r~~~~~~~R~~fd~~~~~~~~~-------e~~~~~~~~L~~Fy~~~--~D~~rli~~~~nl~~~~~~~--i 104 (1001)
T KOG0942|consen 36 QSFWRGFRVRHNQKLLFREEFDAVSTRSRGG-------EELTKLARLLVFFYETN--KDSERLIMVLQNLLKQKTRL--I 104 (1001)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhcCCc-------hhHHHHHHHHHHHhhcc--cccHHHHHHHHHHHHHHHHh--h
Confidence 7999999999999999999999999887755 6777 889999999877 99999999998554332111 0
Q ss_pred eEEEEeeecccchhhhHHHHHHHHHHHHHHHHhhchhhhhhccCCCCCCCCChhHHHHHHhhhccC--CCcchhHHHHHH
Q 002025 82 VGLFAGIDYSSKRALVDFRVKKFAFACIQAVHQNRKELKDQLFVTPEESNTPPTLLLEAVVFLIDS--RLPWTCKVVSYL 159 (978)
Q Consensus 82 ~~~~~~~~~~~~~~l~~~~iK~l~~~C~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~--~~~w~~~i~~~l 159 (978)
+ .++ .+...|.|+++-+||..+...-.+...| ..|......++.....+-.+-|+ ..+|.+.|.+|+
T Consensus 105 ~-------~s~--~~~~~~~k~l~~~c~~~l~n~~~d~l~~--~~p~~ll~~~~~~~~~~~~~~d~~~~~~~v~~i~ay~ 173 (1001)
T KOG0942|consen 105 E-------FSK--RTRLTQLKLLLRKCQRLLQNRNDDTLFQ--AIPRRLLESFTSHSSLVRLLKDLGLFNQEVHLILAYL 173 (1001)
T ss_pred h-------hhc--cchHHHHHHHHHHHHHHHHhhhhhhHHH--HHHHHHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHh
Confidence 0 011 3447899999998888876654444421 12332333445555555666666 678999999999
Q ss_pred HhhhHHHHHHHHHHhcCCccccccccCCccchhhhhhhhccccCCCCcccccCCCCchhhHhhhhhhHHHhhc-hhHHHH
Q 002025 160 LERNVFTLLRELIVTGKESMEIHSSYGRISSLERVLTLIIPHIGQKPCICPNIDPRWSFFSQILTIPFLWHLF-PYIKEV 238 (978)
Q Consensus 160 ~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~~~~~~f~~~ilsiP~l~~~~-~~~~~~ 238 (978)
..+++|..+|.++-+.+.....-...+....+++++.++..|.+..+|.|+.++++|+|++.|++.|.+|.++ ++....
T Consensus 174 ~k~~y~~~lr~l~~~~~~s~~~~s~~~n~~~~e~ll~lvl~~~~~~k~~c~~~d~~~sf~~~~la~d~~~~~~~~~~~~~ 253 (1001)
T KOG0942|consen 174 GKRTYYTSLRALLNSKKLSLLGRSFETNVLPLESLLSLVLLPLRLAKTACTNGDLNFSFTILILAKDHISPIFCPFFLPL 253 (1001)
T ss_pred ccccchhhHHHHhhhccccccccccCCCCChHHHHHHHhccccchhccccccccccccchHHHHhcccchhhccccchhH
Confidence 9999999999777666554433212323678999999999999999999999999999999999999999999 444333
Q ss_pred HhhCCchhhHHHHHhhhhccccccCCccccccccchhhhhHHHHHHhhhhc---cCCCchhhhhhhHHH-HHHHHHhhCC
Q 002025 239 FATGRTSQHYIHQMALCVQNHANVLPHEVSMELPGYACLLGNILETAGVAL---SQPDCSFEMGVDLAA-ITTFLLKALP 314 (978)
Q Consensus 239 ~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~clL~N~~~~~~~~~---~~~~~~~~~~~~~~~-v~t~lL~~l~ 314 (978)
|+ |..++..++.+.|.+++.++.++... +++.+...+....+. +.+.+...+|
T Consensus 254 ~~-----------------------~~~~~~~~~~~~~~~~~al~s~~~i~s~~~~~~l~~l~q~~~~~~y~~~l~~~L~ 310 (1001)
T KOG0942|consen 254 FA-----------------------AMKTSDPLELWEVALESALESAGSIKSGVSQNVLVLLHQSYLLLQYFNFLAEFLP 310 (1001)
T ss_pred Hh-----------------------hhhccccchHHHHHHHHHHhhhcchhhcccchhhhhhhhhhHHHHHHHHHHHHcC
Confidence 32 25567778889999999999888744 488888777765555 5666666666
Q ss_pred Ccccc-CCC--CCCCCCCccCCCCCccccchh--HHHHHHHHhhhhHHHHHHHH-HHhhhcccc-CCCCCCCCCchHHHH
Q 002025 315 PIKSS-RES--SMVSDDDMTAGDEVMEPVINR--DLEKQITSAIDSRFLLQLTN-VLFSGFHLL-RGPHDEGPGDKEVAA 387 (978)
Q Consensus 315 ~~~~~-~~~--~~~~~~~~~~~~~~~~~~~~~--~l~~Ql~~~~~~~~~~~l~~-~lf~~~~~~-~~~~~~g~~~~~~~~ 387 (978)
+|+. +.+ ...++||++..++.-+...+. .-..|......+|....+++ ...+++... +.....--....+.+
T Consensus 311 -pv~~~s~~~r~~~~~dd~~es~d~~~~v~n~l~~~~~~~~~~~~~r~~~cl~~~~~~~qv~~iis~~~~~~~~~~~i~~ 389 (1001)
T KOG0942|consen 311 -PVSHESAIMRHLSVKDDDEESDDEDKSVPNHLKPYCEQMSASNSSRRAACLYANLEKRQVDEIISSTDYDKAFEDLIAN 389 (1001)
T ss_pred -CcCCCCcchhhccccchhhhccccchhhhhhchHHHHhhhhhHHHHHHHHHHhhhhHHHHHHHHHHhcchhhHHHHHHH
Confidence 4544 111 222222223323322222222 34555555556666666665 333333221 000000012333444
Q ss_pred HHHHHHHHH-HhhccchhHHHHHHhhhhhhhHHHHHHH--HHhhccccc-cCCCC----CCCCCCCC------Ccchhhh
Q 002025 388 VGAACAFLH-VAFNTLPLECIMTVLAYRTELVQLLWHY--MKRCHEIRK-WPFLP----YLSGDAPG------WLLPLAV 453 (978)
Q Consensus 388 v~~vC~~~~-~~l~tl~~~~iL~~Laf~~~Ll~~LW~~--I~~~~~~~~-l~sL~----~ls~d~~~------lllpL~l 453 (978)
.+.+|+-++ +..+++|..++++.+||..+++..+|.. +.++..+.. +.++| ....+++. .++-+.+
T Consensus 390 ~~~~~~sl~~~~~~~~p~~rll~~laf~~~~~~~~~f~~~~~~~s~~~~~~s~vp~L~~~~~~~~~~~~~~~~~~~l~~~ 469 (1001)
T KOG0942|consen 390 LNTFCHSLYAQIAKLVPLGRLLYILAFSPKLNAELWFTNCLARRSESMADGSSVPQLIFISFGVTPEFLLDDRIIPLLLL 469 (1001)
T ss_pred HHHHHHHHHHHHHHhCchhhhhHHHhhhHHHHHHHHHHHHHHHHHhhccccccchhHHhhccCCchhhccccchhhHHHH
Confidence 444444433 3467889999999999999999999955 888887765 33444 22222222 2233468
Q ss_pred hhhhHhHHhhhccchhhhccCCCCCHHHHH-HHHHHHHHHHHHHhhcCCCCCCCC-CCccCCCCCCCCCCc--hHHHhhh
Q 002025 454 FCPVYKHMLTIVDNEEFYEQEKPLSLKDIR-HLIVILREALWHLLWLNPTSHPNV-GKSVSSPPPANKMLP--AEAIQHR 529 (978)
Q Consensus 454 fc~l~s~~L~ildDeEf~~~~~p~~l~el~-~l~~~Lk~~~~~ll~~~~~~~~~~-~~~~~~~~~~~~~~~--~~~~~~~ 529 (978)
||.+|+|+|.+.+|+|||+..++.....+. .++.++|.+.+..+|..+.+.++. .+.++.++ .++.+ ...+.+.
T Consensus 470 f~~~f~~~L~s~~d~Ef~e~~~~~~~~~~m~e~i~~lk~l~d~~l~~~~la~~~t~~~~~g~~~--~r~~~~~~~~~~n~ 547 (1001)
T KOG0942|consen 470 FSTMFRRMLYSGHDKEFMEDPKTLWKPVMMPELILLLKYLKDILLWLVPLAFPNTREKVVGITE--SRRMPLRQRRRWNG 547 (1001)
T ss_pred HHHHHHhhhhcccHHHHhcCccccchhhHHHHHHHHHHHHHHHHhcccccccccccccccCcch--hhhhhHHHHHHHHH
Confidence 999999999999999999988777666444 678888888899999877665544 22333221 23344 2222334
Q ss_pred hhHHHHHHHHHHhhhhccCcCCCC---CCccccccchhhhhhhhccccchhhhhhcCCcccchhhHHHHHHHHHHHHHHh
Q 002025 530 VSTVASEVLSQLQDWNNRREFVPP---SDFHADGVNDFFISQATIDGTRANEILKQAPFLVPFTSRAKIFQSQLASVRQR 606 (978)
Q Consensus 530 ~~~~~~~lL~~L~~~n~r~~f~p~---~~f~~~~~~~~~~~~~~~~~~~~~~il~~~Pfl~pf~~Rv~if~~~l~~~r~~ 606 (978)
...+..+++.++++||+|+.|+|+ .+..++..++.+.........|+..||+++||++||+.||++|+++++.+|++
T Consensus 548 ~~~v~~e~l~~~~~rd~r~~f~~~~e~~dl~sd~~~e~~~~l~~~lr~R~l~IL~e~PF~vPF~~RVklfq~lla~dKq~ 627 (1001)
T KOG0942|consen 548 RLQVVRELLTELSERDNRKEFCPSKERPDLKSDDENELFNPLPSFLRFRALCILKEIPFFVPFEERVKLFQRLLALDKQR 627 (1001)
T ss_pred HHHHHHHHHHHHHHHHHHhccCCccccccccccchHHhhcchHhhhhhHHHHHHHcCCeeechHHHHHHHHHHHHHHHHh
Confidence 677889999999999999999987 24445555555555555566789999999999999999999999999999999
Q ss_pred cCCCCCccee---eEEEeCCchHHHHHHHHhcCCccccCccEEEEEEeccCcccccccCCCchHHHHHHHHHHhhcccCC
Q 002025 607 HGSHGVFTRS---RFRIRRDHILEDAYSQMSTMSEEDLRGAIRVTFVNELGVEEAGIDGGGIFKDFMENITRAAFDVQYG 683 (978)
Q Consensus 607 ~~~~~~~~r~---~i~VrR~~ileDa~~~L~~~~~~~lk~~L~V~F~~E~G~~E~GiD~GGv~REFf~~l~~e~fdp~~g 683 (978)
.+..++|++. .++||||+|+||||++++..+..++|..+||+|+||.|++|+||||||++|||++.+++++|||++|
T Consensus 628 ~~~~~~F~~g~s~~~tIRRd~iyeDAfd~f~p~~e~dlk~~iRVtfVne~G~~EaGIDGGGIfkEFLtel~ktaFdpn~G 707 (1001)
T KOG0942|consen 628 HGGDGPFGMGFSPSATIRRDHIYEDAFDAFSPKGEPDLKSSIRVTFVNEHGVDEAGIDGGGIFKEFLTELLKTAFDPNYG 707 (1001)
T ss_pred hcCCCCccCCCCccEEEehhhhHHHHHHhcCccCCcccccceEEEEecccCccccCccCcccHHHHHHHHHHhhcCcccc
Confidence 9887777766 8999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CceecCCCceecCCCCCCchhh-HHHHHHHHHHHHHHHHHcCCcccccCcHHHHHhhhccCC--CCCCCCCCCHHHHHHH
Q 002025 684 LFKETSDHLLYPNPGSGMIHEQ-HLQFFHFLGILLAKAMFEGILVDIPFATFFLSKLKQKYN--YLNDLPSLDPELYRHL 760 (978)
Q Consensus 684 LF~~t~~~~lypnp~s~~~~~~-~l~~f~flG~llGkAL~~g~~ldl~fa~~f~k~Llg~~~--tl~DL~~lDp~l~~sL 760 (978)
+|++|.++.+||||++.+..+. ++++|+|+|+++|||||+|+++|+|||.||++||+|.+. +++||.++||++|++|
T Consensus 708 lF~~T~~~lLYPNp~~~~l~~~~~lkhy~FLGrllGK~iYE~iLvdvpFA~FFlaKllg~~~~vd~~dL~SlDPeLY~nL 787 (1001)
T KOG0942|consen 708 LFKETEDHLLYPNPTAAMLLDVDCLKHYYFLGRLLGKCIYEGILVDVPFAEFFLAKLLGTSNDVDLHDLASLDPELYKNL 787 (1001)
T ss_pred ceeecccceecCCCCchhhhhhHHHHHHHHHHHHHHHHHHhcceecccHHHHHHHHHhCCCCCCChhhhcccCHHHHHHH
Confidence 9999999999999999877655 999999999999999999999999999999999999988 8999999999999999
Q ss_pred HHHhhccC-ccccceeeEEEEeccCCcceeeeccCCCcccccChhhHHHHHHHHHHHHHhhhHHHHHHHHHhhcccccch
Q 002025 761 IFLKHYEA-DISELELYFVILNNEYGEQTEEELLPGGKNIRVTNENVITFIHLVSNHRLNFQIRQQSSHFLRGFQQLIQK 839 (978)
Q Consensus 761 ~~Lk~~~~-dvedL~L~Ftv~~~~~g~~~~veLip~G~~i~VT~eNk~eYI~l~~~~~l~~~i~~q~~aF~~Gf~~Vip~ 839 (978)
++||+|+| |+++|+|+|+|.++++|..+.+||+|||++|+||++|+.+||++|++|+||.+|+.|+.||++||..||++
T Consensus 788 ifLk~y~gddi~eL~L~FtVv~~e~G~~~vVeLkPnGs~i~VTneNvi~YihLVsnY~LN~rir~~c~AFr~Gls~II~~ 867 (1001)
T KOG0942|consen 788 IFLKNYNGDDISELQLDFTVVNSELGERQVVELKPNGSKIRVTNENVIEYIHLVSNYKLNQRIRRQCSAFRKGLSQIISP 867 (1001)
T ss_pred HHHHhcCCCchhhccceEEEeccccccceeEEeccCCccceeechhhhhhhHHhhhhHHHHHHHHHHHHHhcchhhcCCH
Confidence 99999998 88999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hHHhhcCHHHHHHhHcCCCCCCCHHHHhhcccccCCcCCCcHHHHHHHHHHhcCCHHHHhhcceeecCcCCCCCCCcccC
Q 002025 840 DWIDMFNEHELQLLISGSLDSLDFDDLRQNTNYVGGYHSEHYVIEMFWEVLKSFSLENQKKFLKFVTGCSRGPLLGFKYL 919 (978)
Q Consensus 840 ~~L~~F~p~EL~~Li~G~~~~iD~~dL~~~t~y~ggy~~~~~~I~~FWevl~~fs~eer~kfL~FvTGssRlP~~Gf~~L 919 (978)
+|++||++.|||.||+|.+++||++|||+||+|.|||+++||+|.+||||+++|+.|+|++||||||||+|+|+.|||+|
T Consensus 868 eWl~MF~~~ELQiLIsG~~~pidldDLr~~teY~Ggy~~~hp~Iv~FWeVl~~F~~edKr~fLKFVTscsRpPllGFK~L 947 (1001)
T KOG0942|consen 868 EWLRMFNEHELQILISGAEDPIDLDDLRKNTEYAGGYSPDHPTIVMFWEVLEEFSDEDKRKFLKFVTSCSRPPLLGFKAL 947 (1001)
T ss_pred HHHHhhChhheeeeecCCcCcccHHHHHhhccccCCCCCCCCchhHHHHHHHhcchHHHHHHHHHHhcCCCcccccchhc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCceeEeecCCCCCCcCCCCCceeccccCeeecCCCCCHHHHHHHHHHHHHcCCCccCC
Q 002025 920 EPLFCIQRAAGSASEEALDRLPTSATCMNLLKLPPYRSKEQMSTKLLYAINAEAGFDLS 978 (978)
Q Consensus 920 ~p~f~I~~~~~~~~~~~~~rLPtA~TCfN~L~LP~Yss~e~LreKL~~AI~~~~GF~LS 978 (978)
.|+|||+..|.+ .+|||||+||+|+||||+|++++.|||||+|||++|+|||||
T Consensus 948 ~P~FcI~n~gsd-----~~RLPTASTCmNLLKLP~y~~kt~LreKLlYAI~sgAGFeLS 1001 (1001)
T KOG0942|consen 948 DPAFCIRNAGSD-----DDRLPTASTCMNLLKLPPYSNKTLLREKLLYAINSGAGFELS 1001 (1001)
T ss_pred CccceeeeCCCc-----cccCCcHHHHHHHhcCCCcccHHHHHHHHHHHHhcccCCCCC
Confidence 999999998854 579999999999999999999999999999999999999998
No 3
>KOG0941 consensus E3 ubiquitin protein ligase [Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=4.7e-90 Score=802.34 Aligned_cols=532 Identities=32% Similarity=0.525 Sum_probs=434.1
Q ss_pred hHHHHHHhhhhhhhH--HHHH--HHHHhhccccccCCCCCCCCCCCC----CcchhhhhhhhHhHHhhh-----------
Q 002025 404 LECIMTVLAYRTELV--QLLW--HYMKRCHEIRKWPFLPYLSGDAPG----WLLPLAVFCPVYKHMLTI----------- 464 (978)
Q Consensus 404 ~~~iL~~Laf~~~Ll--~~LW--~~I~~~~~~~~l~sL~~ls~d~~~----lllpL~lfc~l~s~~L~i----------- 464 (978)
++..++..+|. +++ +.-| ..|..+.+..+.+.++..+++++. +++|+...-....++...
T Consensus 275 ld~~~~~~~f~-~l~~~~~~~~~~~l~~~~~~~L~~~~s~~~~d~e~~~i~l~l~~~~~~~~s~~~~s~~vp~~~~i~~~ 353 (850)
T KOG0941|consen 275 LDLNLARPAFL-ELTLPLFCKILSELLVAIQKRLIRLWSKYPADQEALYILLLLPLIPLNVLSNEYNSLNVPFADAICIV 353 (850)
T ss_pred ccHHHHHHHHH-HHhhhhHHHHHHHHHHHHHHHHHhhhhhCCcHHHHHHHHHHcccchHHHHHHHHHhccCcHHHHHHHh
Confidence 35667777776 344 2333 224444445555556666666655 333432222222222211
Q ss_pred ccc-----hhhhccCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCccCCCCCCCCCCchHHHhhhhhHHHHHHHH
Q 002025 465 VDN-----EEFYEQEKPLSLKDIRHLIVILREALWHLLWLNPTSHPNVGKSVSSPPPANKMLPAEAIQHRVSTVASEVLS 539 (978)
Q Consensus 465 ldD-----eEf~~~~~p~~l~el~~l~~~Lk~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lL~ 539 (978)
..+ ++||.+. ..+....++++++..+-.++-.... .. ..+..+.++..++.
T Consensus 354 ~~~~~~~l~~~~~~~---~~k~~~~~v~~f~~~V~~~l~~~~~------------------~~---~e~~~i~~~l~~~~ 409 (850)
T KOG0941|consen 354 AENKRLKLVEYWNQL---SPKYFRKLVSMFKEAVTEILKFSKE------------------LA---EENKGIRSALKLLE 409 (850)
T ss_pred hcchHHHHHHHHHHh---chhhcchhhhchhhHHHHhhhccch------------------hh---hhccchhhHHHHHH
Confidence 111 7777765 5667788888888887776621000 00 01224567888999
Q ss_pred HHhhhhccCcCCCCCCccccccchhhhhhhhccc--cc--hhhhhhcCCcccchhhHHHHHHHHHH----HHHHhc----
Q 002025 540 QLQDWNNRREFVPPSDFHADGVNDFFISQATIDG--TR--ANEILKQAPFLVPFTSRAKIFQSQLA----SVRQRH---- 607 (978)
Q Consensus 540 ~L~~~n~r~~f~p~~~f~~~~~~~~~~~~~~~~~--~~--~~~il~~~Pfl~pf~~Rv~if~~~l~----~~r~~~---- 607 (978)
.||..|+|++.+|...||++.+++...-+.+... ++ .-..+++|||+++-.+|+.+++...+ ..++..
T Consensus 410 lly~vN~~~~lip~e~FY~~~l~~~id~~~dy~~w~~~~~~~fsfc~ypFIL~~~aK~~lL~yD~rlrM~~~~~~a~~~s 489 (850)
T KOG0941|consen 410 LLYKVNCRKGLIPYEEFYNEELNDRIDMKEDYVHWRTKQMNCFSFCNYPFILNAVAKIELLQYDARLRMESERRKAFLSS 489 (850)
T ss_pred HHHHHhccCCCCCHHHhhhHHHHhHHHHHHHHHHHHHHhcccceeecCCeecccHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999887765543333211 11 14578999999999999999864321 111110
Q ss_pred --CCCC--CcceeeEEEeCCchHHHHHHHHhcCCccccCccEEEEEEeccCcccccccCCCchHHHHHHHHHHhhcccCC
Q 002025 608 --GSHG--VFTRSRFRIRRDHILEDAYSQMSTMSEEDLRGAIRVTFVNELGVEEAGIDGGGIFKDFMENITRAAFDVQYG 683 (978)
Q Consensus 608 --~~~~--~~~r~~i~VrR~~ileDa~~~L~~~~~~~lk~~L~V~F~~E~G~~E~GiD~GGv~REFf~~l~~e~fdp~~g 683 (978)
.... +-....++|||++|++||+++++..+..|+||+|+|+|+| |+|+|+|||+||||.++++++++|+||
T Consensus 490 ~~~~~~~~~~p~l~l~VrR~~lv~Dsl~~l~~~~~~Dl~K~L~V~F~g-----E~g~DaGGv~kEfF~ll~~ei~~p~~G 564 (850)
T KOG0941|consen 490 LFQGLQLLVSPYLKLTVRRDHLVEDALRQLSMISMSDLKKQLKVEFVG-----EEGVDAGGVRKEFFQLLVEEIFNPEYG 564 (850)
T ss_pred HHhhccCCCCCcEEEEEehhhhHHHHHHHHHhhhhhhhhcceEEEECC-----CcccccCchHHHHHHHHHHHHcCcccc
Confidence 0111 2245689999999999999999999999999999999999 789999999999999999999999999
Q ss_pred CceecCC-CceecCCCCCCchhhHHHHHHHHHHHHHHHHHcCCcccccCcHHHHHhhhccCCCCCCCCCCCHHHHHHHHH
Q 002025 684 LFKETSD-HLLYPNPGSGMIHEQHLQFFHFLGILLAKAMFEGILVDIPFATFFLSKLKQKYNYLNDLPSLDPELYRHLIF 762 (978)
Q Consensus 684 LF~~t~~-~~lypnp~s~~~~~~~l~~f~flG~llGkAL~~g~~ldl~fa~~f~k~Llg~~~tl~DL~~lDp~l~~sL~~ 762 (978)
||...++ +.+|.++... +...+|+++|++||+||||..++|+|||.++||||++.+++++||.++.|.+|+||+.
T Consensus 565 mF~~~e~s~~~WF~~~~~----~~~~~y~liGil~GLAIyN~~ildlpFPlAlykkLl~~~~sl~DL~elsP~~~~sL~~ 640 (850)
T KOG0941|consen 565 MFTYDEESSLLWFNPSPF----EEEKQYHLIGILCGLAIYNNTILDLPFPLALYKKLLDKPPSLEDLKELSPSLGKSLKE 640 (850)
T ss_pred CeecccccceeeecCCCC----CccceeeehhHHHHHHHhccceecCCCcHHHHHHHhcCCCCHHHHHhhChHhhhhHHH
Confidence 9998765 4678887643 2224799999999999999999999999999999999999999999999999999999
Q ss_pred HhhccC-ccc-cceeeEEEEeccCCcceeeeccCCCcccccChhhHHHHHHHHHHHHHhhhHHHHHHHHHhhcccccchh
Q 002025 763 LKHYEA-DIS-ELELYFVILNNEYGEQTEEELLPGGKNIRVTNENVITFIHLVSNHRLNFQIRQQSSHFLRGFQQLIQKD 840 (978)
Q Consensus 763 Lk~~~~-dve-dL~L~Ftv~~~~~g~~~~veLip~G~~i~VT~eNk~eYI~l~~~~~l~~~i~~q~~aF~~Gf~~Vip~~ 840 (978)
|++|+| |++ .++++|+|..+.+|...+++|+|||.+|+||++||+|||.+|++|.+|++|++|++||++||++|++.+
T Consensus 641 lL~y~gdd~ed~f~l~F~i~~~~~g~~~~~~L~~nG~~i~vt~~Nr~efV~~Yvd~~~n~sv~~q~~aF~~GF~~v~~~~ 720 (850)
T KOG0941|consen 641 LLDYEGDDVEDVFDLTFQISQDDNGIPRTYELKPNGDEIPVTNENRREFVNLYVDYILNKSVKKQFEAFRRGFYKVCDEN 720 (850)
T ss_pred HHhccccchhhheeeEEEEEehhcCccceeeccCCCcccccccccHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHhchh
Confidence 999998 775 489999999999998899999999999999999999999999999999999999999999999999999
Q ss_pred HHhhcCHHHHHHhHcCCCCCCCHHHHhhcccccCCcCCCcHHHHHHHHHHhcCCHHHHhhcceeecCcCCCCCCCcccCC
Q 002025 841 WIDMFNEHELQLLISGSLDSLDFDDLRQNTNYVGGYHSEHYVIEMFWEVLKSFSLENQKKFLKFVTGCSRGPLLGFKYLE 920 (978)
Q Consensus 841 ~L~~F~p~EL~~Li~G~~~~iD~~dL~~~t~y~ggy~~~~~~I~~FWevl~~fs~eer~kfL~FvTGssRlP~~Gf~~L~ 920 (978)
.+++|.|+||+.+|||+++ +||+.|+++|+|+|||+++||+|+|||+++++|+.++|+|||+|+|||+|+|++|.+.+
T Consensus 721 ~l~lf~peEl~~li~G~~~-~Dw~~l~~~~~Y~ggy~~~~~~I~~FWe~~~~~~~~~kkkfL~F~TGsdRipv~G~~~l- 798 (850)
T KOG0941|consen 721 LLRLFQPEELEKLICGSED-YDWKALEETTEYDGGYTSDSPTIQWFWEIFHAFTLEEKKKFLQFLTGSDRIPVGGLAKL- 798 (850)
T ss_pred hhhhcCHHHHHHHHhCCCc-cCHHHHhhhceecCcccCCChHHHHHHHHHHhCCHHHhhhheEeecCCCccccCChhhc-
Confidence 9999999999999999976 99999999999999999999999999999999999999999999999999999999988
Q ss_pred CceeEeecCCCCCCcCCCCCceeccccCeeecCCCCCHHHHHHHHHHHHHcCCCccC
Q 002025 921 PLFCIQRAAGSASEEALDRLPTSATCMNLLKLPPYRSKEQMSTKLLYAINAEAGFDL 977 (978)
Q Consensus 921 p~f~I~~~~~~~~~~~~~rLPtA~TCfN~L~LP~Yss~e~LreKL~~AI~~~~GF~L 977 (978)
++.|++.+++ .++||+||||||.|.||+|+|+|.|++||+.||++++||++
T Consensus 799 -~~~i~~~~~~-----~~~lP~shTCfN~L~Lp~YsskekL~~kL~~Ai~~~~GF~l 849 (850)
T KOG0941|consen 799 -KLVIQKNGPD-----EDRLPVSHTCFNVLLLPEYSSKEKLEEKLLTAINNTEGFGL 849 (850)
T ss_pred -eEEEecCCCC-----cccCcchhhhhhhhhccccCcHHHHHHHHHHHHHhccCcCC
Confidence 5888887754 47999999999999999999999999999999999999997
No 4
>COG5021 HUL4 Ubiquitin-protein ligase [Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=1.6e-87 Score=810.00 Aligned_cols=353 Identities=41% Similarity=0.724 Sum_probs=338.5
Q ss_pred ceeeEEEeCCchHHHHHHHHhcCCccccCccEEEEEEeccCcccccccCCCchHHHHHHHHHHhhcccCCCceecC--CC
Q 002025 614 TRSRFRIRRDHILEDAYSQMSTMSEEDLRGAIRVTFVNELGVEEAGIDGGGIFKDFMENITRAAFDVQYGLFKETS--DH 691 (978)
Q Consensus 614 ~r~~i~VrR~~ileDa~~~L~~~~~~~lk~~L~V~F~~E~G~~E~GiD~GGv~REFf~~l~~e~fdp~~gLF~~t~--~~ 691 (978)
...+|+|||+++++|+++++...++.++|+.|+|+|+| |+|||+||++||||..+++++|+|+|+||..+. ..
T Consensus 513 ~~l~I~VrRd~vf~Dsy~~i~~~~~~~~k~~L~i~F~~-----EeGiD~GGltrE~~~lLs~~~Fnp~y~LF~y~t~d~~ 587 (872)
T COG5021 513 PYLHIKVRRDRVFEDSYREIMDESGDDLKKTLEIEFVG-----EEGIDAGGLTREWLFLLSKEMFNPDYGLFEYITEDLY 587 (872)
T ss_pred cceEEEEecccchHHHHHHHHHhchhhhcceEEEEecC-----cccccCCccchHHHHHHhHHhcCCcccceeeeccccc
Confidence 34589999999999999999999999999999999999 789999999999999999999999999998765 35
Q ss_pred ceecCCCCCCchhhHHHHHHHHHHHHHHHHHcCCcccccCcHHHHHhhhccCCCCCCCCCCCHHHHHHHHHHhhccCccc
Q 002025 692 LLYPNPGSGMIHEQHLQFFHFLGILLAKAMFEGILVDIPFATFFLSKLKQKYNYLNDLPSLDPELYRHLIFLKHYEADIS 771 (978)
Q Consensus 692 ~lypnp~s~~~~~~~l~~f~flG~llGkAL~~g~~ldl~fa~~f~k~Llg~~~tl~DL~~lDp~l~~sL~~Lk~~~~dve 771 (978)
.++|||.++ ++++|+++|+|+||+||+||||++.+|++||.+|||+|++++++++|+.++||++|++|.+|++++.|..
T Consensus 588 ~~~~n~~s~-~npe~L~yf~fiGrvIGkaIyd~~~LD~~F~~~fyKklL~~~~sl~Dl~s~Dpe~y~sLv~ll~~~~d~~ 666 (872)
T COG5021 588 TLPINPLSS-INPEHLSYFKFLGRVIGKAIYDSRILDVQFSKAFYKKLLGKPVSLVDLESLDPELYRSLVWLLNNDIDET 666 (872)
T ss_pred ccCcCcccc-CCHHHHHHHHHHHHHHHHHHHhcceeeecchHHHHHHHhCCCCchhhhhhcCHHHHHHHHHHHcCCCCcc
Confidence 678899887 7899999999999999999999999999999999999999999999999999999999999999998877
Q ss_pred cceeeEEEEeccCCcceeeeccCCCcccccChhhHHHHHHHHHHHHHhhhHHHHHHHHHhhcccccchhHHhhcCHHHHH
Q 002025 772 ELELYFVILNNEYGEQTEEELLPGGKNIRVTNENVITFIHLVSNHRLNFQIRQQSSHFLRGFQQLIQKDWIDMFNEHELQ 851 (978)
Q Consensus 772 dL~L~Ftv~~~~~g~~~~veLip~G~~i~VT~eNk~eYI~l~~~~~l~~~i~~q~~aF~~Gf~~Vip~~~L~~F~p~EL~ 851 (978)
.++++|++.++.+|..++|||||||+||+||++||++||++|++|+++++|++|++||..||.+|||++|+.||+++||+
T Consensus 667 ~l~l~Fsve~~~fg~~~tVeLipnG~ni~VT~~Nk~eYV~~vvdy~L~k~ie~Q~~AF~~GF~~ii~~~~i~iF~e~ELe 746 (872)
T COG5021 667 ILDLTFTVEDDSFGESRTVELIPNGRNISVTNENKKEYVKKVVDYKLNKRVEKQFSAFKSGFSEIIPPDLLQIFDESELE 746 (872)
T ss_pred eeeeeEEEeecccCceeEEEeccCCccccccchHHHHHHHHHHHHHhhhhHHHHHHHHHhhHHHhcCHHHHhhcCHHHHH
Confidence 89999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhHcCCCCCCCHHHHhhcccccCCcCCCcHHHHHHHHHHhcCCHHHHhhcceeecCcCCCCCCCcccCCC-----ceeEe
Q 002025 852 LLISGSLDSLDFDDLRQNTNYVGGYHSEHYVIEMFWEVLKSFSLENQKKFLKFVTGCSRGPLLGFKYLEP-----LFCIQ 926 (978)
Q Consensus 852 ~Li~G~~~~iD~~dL~~~t~y~ggy~~~~~~I~~FWevl~~fs~eer~kfL~FvTGssRlP~~Gf~~L~p-----~f~I~ 926 (978)
.||||.+++||++|||+||.|. ||++++|+|.|||+++++|+.|+|++|||||||++|+|++||+.|+| +|+|+
T Consensus 747 ~LI~G~~e~iDidd~K~~T~Y~-GY~~~s~~I~wFWeii~~f~~eer~klLQFvTGtsriPi~GFk~L~~~~~~~kf~I~ 825 (872)
T COG5021 747 LLIGGIPEDIDIDDWKSNTAYH-GYTEDSPIIVWFWEIISEFDFEERAKLLQFVTGTSRIPINGFKDLQGSDGVRKFTIE 825 (872)
T ss_pred HHHCCCCccccHHHHhhccccc-ccccCCcHHHHHHHHHHHhCHHHHhhhheeccCCCCCCCCChhhcCCCcccceeeee
Confidence 9999998779999999999996 79999999999999999999999999999999999999999999999 78998
Q ss_pred ecCCCCCCcCCCCCceeccccCeeecCCCCCHHHHHHHHHHHHHcCCCccCC
Q 002025 927 RAAGSASEEALDRLPTSATCMNLLKLPPYRSKEQMSTKLLYAINAEAGFDLS 978 (978)
Q Consensus 927 ~~~~~~~~~~~~rLPtA~TCfN~L~LP~Yss~e~LreKL~~AI~~~~GF~LS 978 (978)
+.+.+ ++|||+||||||+|+||+|+|||+||+||.+||++|+||+++
T Consensus 826 ~~g~~-----~~rLP~ahTCFN~L~LP~YsSke~Lr~kL~~AI~Eg~GFg~~ 872 (872)
T COG5021 826 KGGTD-----DDRLPSAHTCFNRLKLPEYSSKEKLRSKLLTAINEGAGFGLL 872 (872)
T ss_pred cCCCc-----cccCCchhhhhhhccCCCCCCHHHHHHHHHHHHHhccCcCcC
Confidence 87753 579999999999999999999999999999999999999985
No 5
>cd00078 HECTc HECT domain; C-terminal catalytic domain of a subclass of Ubiquitin-protein ligase (E3). It binds specific ubiquitin-conjugating enzymes (E2), accepts ubiquitin from E2, transfers ubiquitin to substrate lysine side chains, and transfers additional ubiquitin molecules to the end of growing ubiquitin chains.
Probab=100.00 E-value=7.2e-82 Score=714.35 Aligned_cols=348 Identities=49% Similarity=0.821 Sum_probs=332.8
Q ss_pred eEEEeCCchHHHHHHHHhcCCccccCccEEEEEEeccCcccccccCCCchHHHHHHHHHHhhcccCCCceecCC--Ccee
Q 002025 617 RFRIRRDHILEDAYSQMSTMSEEDLRGAIRVTFVNELGVEEAGIDGGGIFKDFMENITRAAFDVQYGLFKETSD--HLLY 694 (978)
Q Consensus 617 ~i~VrR~~ileDa~~~L~~~~~~~lk~~L~V~F~~E~G~~E~GiD~GGv~REFf~~l~~e~fdp~~gLF~~t~~--~~ly 694 (978)
+++|||++|++|+++++...++.+++++++|+|+| |.|+|+|||+||||+++++++++|+++||..+++ +.+|
T Consensus 2 ~i~v~R~~i~~~~~~~l~~~~~~~l~~~l~V~F~g-----E~g~D~GG~~rE~~~~l~~el~~~~~~lF~~~~~~~~~~~ 76 (352)
T cd00078 2 KITVRRDRILEDALRQLSKVSSSDLKKVLEVEFVG-----EEGIDAGGVTREFFTLVSKELFNPSYGLFRYTPDDSGLLY 76 (352)
T ss_pred eEEEECCcHHHHHHHHHHhcCHHHhcCceEEEECC-----CCccCCCcchHHHHHHHHHHHcCCCCCCeeecCCCCceEE
Confidence 68999999999999999999888999999999998 7899999999999999999999999999998887 7899
Q ss_pred cCCCCCCchhhHHHHHHHHHHHHHHHHHcCCcccccCcHHHHHhhhccCCCCCCCCCCCHHHHHHHHHHhhccCccccce
Q 002025 695 PNPGSGMIHEQHLQFFHFLGILLAKAMFEGILVDIPFATFFLSKLKQKYNYLNDLPSLDPELYRHLIFLKHYEADISELE 774 (978)
Q Consensus 695 pnp~s~~~~~~~l~~f~flG~llGkAL~~g~~ldl~fa~~f~k~Llg~~~tl~DL~~lDp~l~~sL~~Lk~~~~dvedL~ 774 (978)
|||.+. ..++++++|+++|+++|+||++|.+++++||++|||+|+|.+++++||+++||++|++|.+|+++++++++++
T Consensus 77 ~~p~~~-~~~~~~~~f~~~G~lig~al~~~~~l~l~f~~~f~k~L~g~~~t~~Dl~~iD~~~~~sl~~l~~~~~~~~~l~ 155 (352)
T cd00078 77 PNPSSF-ADEDHLKLFRFLGRLLGKALYEGRLLDLPFSRAFYKKLLGKPLSLEDLEELDPELYKSLKELLDNDGDEDDLE 155 (352)
T ss_pred eCCCcc-cchhHHHHHHHHHHHHHHHHHcCceeCCCCCHHHHHHHhCCCCCHHHHHHhCHHHHHHHHHHHhcCCchhhhc
Confidence 999875 3357889999999999999999999999999999999999999999999999999999999999887788999
Q ss_pred eeEEEEecc-CCcceeeeccCCCcccccChhhHHHHHHHHHHHHHhhhHHHHHHHHHhhcccccchhHHhhcCHHHHHHh
Q 002025 775 LYFVILNNE-YGEQTEEELLPGGKNIRVTNENVITFIHLVSNHRLNFQIRQQSSHFLRGFQQLIQKDWIDMFNEHELQLL 853 (978)
Q Consensus 775 L~Ftv~~~~-~g~~~~veLip~G~~i~VT~eNk~eYI~l~~~~~l~~~i~~q~~aF~~Gf~~Vip~~~L~~F~p~EL~~L 853 (978)
++|++..+. .|+..++||+|||++++||.+||++||+++++|+++++++.|++||++||++|+|.+++++|+|+||+.+
T Consensus 156 l~F~~~~~~~~~~~~~veL~~~G~~~~VT~~N~~eYv~~~~~~~l~~~~~~~~~afr~Gf~~vip~~~l~~f~~~eL~~l 235 (352)
T cd00078 156 LTFTIELDSSFGGAVTVELKPGGRDIPVTNENKEEYVDLYVDYRLNKGIEEQVEAFRDGFSEVIPEELLSLFTPEELELL 235 (352)
T ss_pred ceeEEEEeecCCCcceEecCCCCCCCcCCHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHcCHHhhhCCCHHHHHHH
Confidence 999998776 7888999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HcCCCCCCCHHHHhhcccccCCcCCCcHHHHHHHHHHhcCCHHHHhhcceeecCcCCCCCCCcccCCCceeEeecCCCCC
Q 002025 854 ISGSLDSLDFDDLRQNTNYVGGYHSEHYVIEMFWEVLKSFSLENQKKFLKFVTGCSRGPLLGFKYLEPLFCIQRAAGSAS 933 (978)
Q Consensus 854 i~G~~~~iD~~dL~~~t~y~ggy~~~~~~I~~FWevl~~fs~eer~kfL~FvTGssRlP~~Gf~~L~p~f~I~~~~~~~~ 933 (978)
+||.+ +||+++|++|+.|.|||+.++++|+|||+++++||+|||++||+|+|||+|+|++||+.++|+|+|++.+.
T Consensus 236 vcG~~-~id~~~l~~~~~y~~~~~~~~~~i~~Fw~vl~~~s~eer~~fL~F~TG~~rlP~~G~~~l~~~i~i~~~~~--- 311 (352)
T cd00078 236 ICGSE-DIDLEDLKKNTEYKGGYSSDSPTIQWFWEVLESFTNEERKKFLQFVTGSSRLPVGGFADLNPKFTIRRVGS--- 311 (352)
T ss_pred hCCCC-CCCHHHHHhceEecCCCCCCCHHHHHHHHHHHhCCHHHHHHhheeecCCCCCCCcchhhcCCCeEEEECCC---
Confidence 99985 59999999999999999999999999999999999999999999999999999999999999999998753
Q ss_pred CcCCCCCceeccccCeeecCCCCCHHHHHHHHHHHHHcCCCcc
Q 002025 934 EEALDRLPTSATCMNLLKLPPYRSKEQMSTKLLYAINAEAGFD 976 (978)
Q Consensus 934 ~~~~~rLPtA~TCfN~L~LP~Yss~e~LreKL~~AI~~~~GF~ 976 (978)
++++||+||||||+|+||.|+|+|+||+||++||++++|||
T Consensus 312 --~~~~LP~a~TCf~~L~LP~Yss~e~l~~kL~~AI~~~~gF~ 352 (352)
T cd00078 312 --PDDRLPTAHTCFNLLKLPPYSSKEILREKLLYAINEGAGFG 352 (352)
T ss_pred --CCCCCCcchhhhccccCCCCCCHHHHHHHHHHHHHcCCCCC
Confidence 35799999999999999999999999999999999999997
No 6
>smart00119 HECTc Domain Homologous to E6-AP Carboxyl Terminus with. E3 ubiquitin-protein ligases. Can bind to E2 enzymes.
Probab=100.00 E-value=1.8e-78 Score=681.20 Aligned_cols=331 Identities=45% Similarity=0.778 Sum_probs=308.5
Q ss_pred CccccCcc-EEEEEEeccCcccccccCCCchHHHHHHHHHHhhcccCCCceecCC-CceecCCCCCCchhhHHHHHHHHH
Q 002025 637 SEEDLRGA-IRVTFVNELGVEEAGIDGGGIFKDFMENITRAAFDVQYGLFKETSD-HLLYPNPGSGMIHEQHLQFFHFLG 714 (978)
Q Consensus 637 ~~~~lk~~-L~V~F~~E~G~~E~GiD~GGv~REFf~~l~~e~fdp~~gLF~~t~~-~~lypnp~s~~~~~~~l~~f~flG 714 (978)
+..++|++ ++|+|+| |+|+|+|||+||||+++++++++|++|||..+++ ..+||||.+....++++++|+++|
T Consensus 3 ~~~~~~~~~l~V~F~g-----E~g~d~gG~~rEf~~~l~~el~~~~~~lf~~~~~~~~~~~~p~~~~~~~~~l~~f~~~G 77 (336)
T smart00119 3 SDEDLKKSVLEIEFEG-----EEGLDGGGVTREFFFLLSKELFNPDYGLFRYSPNDYLLYPNPRAFFANPEHLAYFRFIG 77 (336)
T ss_pred ChHHhCCCeEEEEECC-----CCCccCCchHHHHHHHHHHHHhCcccCCceEcCCCCeEEeCCCccccchHHHHHHHHHH
Confidence 34678888 9999998 7899999999999999999999999999998765 489999987655678899999999
Q ss_pred HHHHHHHHcCCcccccCcHHHHHhhhccCCCCCCCCCCCHHHHHHHHHHhhccCccccceeeEEEE-eccCCcceeeecc
Q 002025 715 ILLAKAMFEGILVDIPFATFFLSKLKQKYNYLNDLPSLDPELYRHLIFLKHYEADISELELYFVIL-NNEYGEQTEEELL 793 (978)
Q Consensus 715 ~llGkAL~~g~~ldl~fa~~f~k~Llg~~~tl~DL~~lDp~l~~sL~~Lk~~~~dvedL~L~Ftv~-~~~~g~~~~veLi 793 (978)
+++|+||++|.+++++||++|||+|+|.+++++||+++||++|++|.+++...+..++++++|++. ...+|+..++||+
T Consensus 78 ~lig~al~~~~~~~l~f~~~f~k~L~~~~~tl~Dl~~~D~~~~~sl~~l~~~~~~~~~~~l~F~~~~~~~~g~~~~~eL~ 157 (336)
T smart00119 78 RVLGKALYDNRLLDLFFARPFYKKLLGKPVTLHDLESLDPELYKSLKWLLLNNDTSEELDLTFSIVLTSEFGQVKVVELK 157 (336)
T ss_pred HHHHHHHHcCCeeCCCCCHHHHHHHhCCCCCHHHHHHhCHHHHHHHHHHHHhCCCcccccceEEEEeeecCCCcceEecC
Confidence 999999999999999999999999999999999999999999999999953222335689999854 4457888899999
Q ss_pred CCCcccccChhhHHHHHHHHHHHHHhhhHHHHHHHHHhhcccccchhHHhhcCHHHHHHhHcCCCCCCCHHHHhhccccc
Q 002025 794 PGGKNIRVTNENVITFIHLVSNHRLNFQIRQQSSHFLRGFQQLIQKDWIDMFNEHELQLLISGSLDSLDFDDLRQNTNYV 873 (978)
Q Consensus 794 p~G~~i~VT~eNk~eYI~l~~~~~l~~~i~~q~~aF~~Gf~~Vip~~~L~~F~p~EL~~Li~G~~~~iD~~dL~~~t~y~ 873 (978)
|||++++||.+||++||+++++|+++.+++.|++||++||++|+|.+++++|+|+||+.++||.+ +||+++|++|++|.
T Consensus 158 ~~G~~~~Vt~~N~~eYv~~~~~~~l~~~~~~~~~afr~Gf~~vip~~~l~~f~~~eL~~licG~~-~i~~~~l~~~~~~~ 236 (336)
T smart00119 158 PGGSNIPVTEENKKEYVHLVIEYRLNKGIEKQLEAFREGFSEVIPENLLRLFTPEELELLICGSP-EIDVDDLKSNTEYK 236 (336)
T ss_pred CCCCCCcCCHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHcCHHHhhCCCHHHHHHHhCCCC-CCCHHHHhhheEEc
Confidence 99999999999999999999999999999999999999999999999999999999999999987 49999999999999
Q ss_pred CCcCCCcHHHHHHHHHHhcCCHHHHhhcceeecCcCCCCCCCcccCCCceeEeecCCCCCCcCCCCCceeccccCeeecC
Q 002025 874 GGYHSEHYVIEMFWEVLKSFSLENQKKFLKFVTGCSRGPLLGFKYLEPLFCIQRAAGSASEEALDRLPTSATCMNLLKLP 953 (978)
Q Consensus 874 ggy~~~~~~I~~FWevl~~fs~eer~kfL~FvTGssRlP~~Gf~~L~p~f~I~~~~~~~~~~~~~rLPtA~TCfN~L~LP 953 (978)
+||++++++|+|||+++++||+|||++||+|+|||+|+|++||+.++|+|+|++.+. ++++||+||||||+|+||
T Consensus 237 ~g~~~~~~~i~~Fw~vl~~~s~ee~~~fL~F~TG~~rlP~~G~~~l~~~~~i~~~~~-----~~~~LP~a~TCfn~L~LP 311 (336)
T smart00119 237 GGYSENSQTIKWFWEVVESFTNEERRKLLQFVTGSSRLPVGGFAALSPKFTIRKAGS-----DDDRLPTAHTCFNRLKLP 311 (336)
T ss_pred CCCCCCCHHHHHHHHHHHHCCHHHHHHhheeccCCCCCCCCchhhcCCceEEEECCC-----CCCCCCccccccCcCcCC
Confidence 999999999999999999999999999999999999999999999999999998753 257999999999999999
Q ss_pred CCCCHHHHHHHHHHHHHcCCCccCC
Q 002025 954 PYRSKEQMSTKLLYAINAEAGFDLS 978 (978)
Q Consensus 954 ~Yss~e~LreKL~~AI~~~~GF~LS 978 (978)
.|+|+|+||+||++||++++||+||
T Consensus 312 ~Yss~e~l~~kL~~AI~~~~gF~l~ 336 (336)
T smart00119 312 PYSSKEILREKLLLAINEGKGFGLS 336 (336)
T ss_pred CCCCHHHHHHHHHHHHHcCCCCCCC
Confidence 9999999999999999999999997
No 7
>KOG0939 consensus E3 ubiquitin-protein ligase/Putative upstream regulatory element binding protein [Posttranslational modification, protein turnover, chaperones; Transcription]
Probab=100.00 E-value=5.2e-78 Score=689.30 Aligned_cols=381 Identities=38% Similarity=0.676 Sum_probs=356.2
Q ss_pred hhhhhcCCcccchhhHHHHHHHHHHHHHHhcCCCCCcceeeEEEeCCchHHHHHHHHhcCCccccCccEEEEEEeccCcc
Q 002025 577 NEILKQAPFLVPFTSRAKIFQSQLASVRQRHGSHGVFTRSRFRIRRDHILEDAYSQMSTMSEEDLRGAIRVTFVNELGVE 656 (978)
Q Consensus 577 ~~il~~~Pfl~pf~~Rv~if~~~l~~~r~~~~~~~~~~r~~i~VrR~~ileDa~~~L~~~~~~~lk~~L~V~F~~E~G~~ 656 (978)
..++.++|-++.|+.|.++|++.++....+. ....+.|+|+.+++|+++++...++++++.++.|+|.|
T Consensus 331 f~ll~~~~~ll~F~~Kr~yf~r~L~~~~~~~------~~~~v~v~R~~v~~~S~~~~~~~s~~e~~~rl~I~f~g----- 399 (720)
T KOG0939|consen 331 FSLLLKNPMLLDFDNKRKYFKRELRKEHASS------EKLAVLVRRALVLEDSFRALLYKSPEELKTRLEVTFQG----- 399 (720)
T ss_pred hhhheecCcceecccHHHHHHHHHHHhhccC------CcceEEEeHHHHHHHHHHHHHhCCHHHHhcceEEEEec-----
Confidence 5678899999999999999999887654441 22378999999999999999999999999999999999
Q ss_pred cccccCCCchHHHHHHHHHHhhcccCCCceecCCC--ceecCCCCCCchhhHHHHHHHHHHHHHHHHHcCCcccccCcHH
Q 002025 657 EAGIDGGGIFKDFMENITRAAFDVQYGLFKETSDH--LLYPNPGSGMIHEQHLQFFHFLGILLAKAMFEGILVDIPFATF 734 (978)
Q Consensus 657 E~GiD~GGv~REFf~~l~~e~fdp~~gLF~~t~~~--~lypnp~s~~~~~~~l~~f~flG~llGkAL~~g~~ldl~fa~~ 734 (978)
|+|+|+|||+||||..+++++|||.|+||....+. .+.|||+|+ .+++||.+|+|+||++|||||+|.+++..|...
T Consensus 400 EEg~D~gG~~rEw~~ll~r~ifnp~~alf~~~~~d~tt~~pn~~s~-~np~hLs~fkf~GriigKal~d~ql~~c~ftrs 478 (720)
T KOG0939|consen 400 EEGSDAGGVTREWLQLLSREIFNPRYALFTTVGSDQTTFHPNPNSY-VNPEHLSYFKFVGRIIGKALFDGQLLECYFTRS 478 (720)
T ss_pred ccccccchHHHHHHHHHHHHHcCCCcceEEEcCCCceEEeeCCccc-CChhhhhHHHhhHHHHHHHHhcchhhhheeeHH
Confidence 78999999999999999999999999999987654 678999987 789999999999999999999999999999999
Q ss_pred HHHhhhccCCCCCCCCCCCHHHHHHHHHHhhccCcccc-ceeeEEEEeccCCcceeeeccCCCcccccChhhHHHHHHHH
Q 002025 735 FLSKLKQKYNYLNDLPSLDPELYRHLIFLKHYEADISE-LELYFVILNNEYGEQTEEELLPGGKNIRVTNENVITFIHLV 813 (978)
Q Consensus 735 f~k~Llg~~~tl~DL~~lDp~l~~sL~~Lk~~~~dved-L~L~Ftv~~~~~g~~~~veLip~G~~i~VT~eNk~eYI~l~ 813 (978)
|||+++|.+.+..|+++.||+.|++|.+++++ |+++ ++++|+...+++|...++||+|||++|.||++||.+||+++
T Consensus 479 fyk~ilG~~v~~~d~es~DP~y~k~l~~il~n--dis~~l~ltfs~e~~~~g~~~~~eL~p~G~~i~Vt~~nK~~yv~lv 556 (720)
T KOG0939|consen 479 FYKHILGLPVTYHDMESADPEYYKSLVWILKN--DISDTLELTFSEEDDEFGVESVVELKPGGAKIYVTEANKQEYVQLV 556 (720)
T ss_pred HHhhccCCceeeeehhhcChHHhhceeehhcC--CcccceeEEEEEeeccccccceeecccCCCceeeccccHHHHHHHH
Confidence 99999999999999999999999999999864 4443 99999999999999999999999999999999999999999
Q ss_pred HHHHHhhhHHHHHHHHHhhcccccchhHHhhcCHHHHHHhHcCCCCCCCHHHHhhcccccCCcCCCcHHHHHHHHHHhcC
Q 002025 814 SNHRLNFQIRQQSSHFLRGFQQLIQKDWIDMFNEHELQLLISGSLDSLDFDDLRQNTNYVGGYHSEHYVIEMFWEVLKSF 893 (978)
Q Consensus 814 ~~~~l~~~i~~q~~aF~~Gf~~Vip~~~L~~F~p~EL~~Li~G~~~~iD~~dL~~~t~y~ggy~~~~~~I~~FWevl~~f 893 (978)
++|||..+|++|++||.+||+++||...+++|+.+||+.||||-++ ||++||++||.|. ||+..+++|+|||++|++|
T Consensus 557 ~q~rL~~~ir~ql~afl~Gl~~iip~~li~if~E~ELELLisGlpe-idvdd~k~nt~y~-~~~~~~~~i~wFWrav~sf 634 (720)
T KOG0939|consen 557 TQYRLTNSIRKQLDAFLAGLHEIIPKVLLSIFDEQELELLISGLPE-IDVDDLKANTEYL-GYTKASSVIQWFWRAVRSF 634 (720)
T ss_pred HHHHHHhhHHHHHHHHHHHHHHhhHHHHHHHhhhHHHHHHHcCCCc-ccHHHHHhhhhhh-cccccchHHHHHHHHHhhh
Confidence 9999999999999999999999999999999999999999999875 9999999999997 7888899999999999999
Q ss_pred CHHHHhhcceeecCcCCCCCCCcccCCC-----ceeEeecCCCCCCcCCCCCceeccccCeeecCCCCCHHHHHHHHHHH
Q 002025 894 SLENQKKFLKFVTGCSRGPLLGFKYLEP-----LFCIQRAAGSASEEALDRLPTSATCMNLLKLPPYRSKEQMSTKLLYA 968 (978)
Q Consensus 894 s~eer~kfL~FvTGssRlP~~Gf~~L~p-----~f~I~~~~~~~~~~~~~rLPtA~TCfN~L~LP~Yss~e~LreKL~~A 968 (978)
+.|||.|||+||||++++|++||++|.+ +|.|++.... .++||+||||||.|+||.|.|||.++++|+.|
T Consensus 635 ~~eeraklLqFvTGtSkvP~~GF~~l~g~ng~q~fqi~~~~~s-----~d~LP~ahTCfnqL~LP~Y~Sye~l~~~LllA 709 (720)
T KOG0939|consen 635 DQEERAKLLQFVTGTSKVPLGGFAALEGMNGVQKFQIHADPGS-----TDRLPTAHTCFNQLFLPHYASYEQLRESLLLA 709 (720)
T ss_pred cHHHHHhhHeeecccccCCcccccccccCCcceeEEEEeCCCC-----CCCCcchhhhhhhhcCcchhhHHHHHHHHHHH
Confidence 9999999999999999999999999998 8999976533 57999999999999999999999999999999
Q ss_pred HHcC-CCccCC
Q 002025 969 INAE-AGFDLS 978 (978)
Q Consensus 969 I~~~-~GF~LS 978 (978)
|+++ .||++.
T Consensus 710 i~E~segfg~a 720 (720)
T KOG0939|consen 710 INEGSEGFGMA 720 (720)
T ss_pred HHhhhhccCcC
Confidence 9999 599873
No 8
>KOG0170 consensus E3 ubiquitin protein ligase [Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=2.9e-72 Score=620.69 Aligned_cols=393 Identities=31% Similarity=0.523 Sum_probs=349.6
Q ss_pred ccchhhhhhcCCcccchhhHHHHHHHHH-------HHHHHhc-----C-------CCCCcceeeEEEeCCchHHHHHHHH
Q 002025 573 GTRANEILKQAPFLVPFTSRAKIFQSQL-------ASVRQRH-----G-------SHGVFTRSRFRIRRDHILEDAYSQM 633 (978)
Q Consensus 573 ~~~~~~il~~~Pfl~pf~~Rv~if~~~l-------~~~r~~~-----~-------~~~~~~r~~i~VrR~~ileDa~~~L 633 (978)
..+...+.+.+||+|||++|..+|+... ...++.. + .-+...|.+++|.|++|++.|.+.|
T Consensus 164 p~w~~~L~~~cpfLfpf~Tr~~~f~~taFg~~R~~~~~k~~s~~~~~~s~~e~~~~~grL~RkK~risR~~Il~sa~kvm 243 (621)
T KOG0170|consen 164 PDWSLFLTRRCPFLFPFDTRMLYFYSTAFGLSRAIQLLKNKSKGSKDGSNDEALQQLGRLTRKKLRISRKTILASALKVM 243 (621)
T ss_pred ChhhhhhhhcCCeeccHHHHHHHHHHHHhhhhhHHHHHhhcccCCCCCCchHHhHhhcccchhhhhhhHHHHHHHHHHHH
Confidence 3567788899999999999999998521 1111111 0 0123467799999999999999999
Q ss_pred hcCCccccCccEEEEEEeccCcccccccCCCchHHHHHHHHHHhhcccCCCceec----------CC-------CceecC
Q 002025 634 STMSEEDLRGAIRVTFVNELGVEEAGIDGGGIFKDFMENITRAAFDVQYGLFKET----------SD-------HLLYPN 696 (978)
Q Consensus 634 ~~~~~~~lk~~L~V~F~~E~G~~E~GiD~GGv~REFf~~l~~e~fdp~~gLF~~t----------~~-------~~lypn 696 (978)
...+ .-+..|+|+|.+|.|. |-||+-||++++.+++..++.|||+.. .+ .++||.
T Consensus 244 ~~yg--ss~~vLEIEY~~EvGT------GLGPTLEFYtlVSk~fq~~sLgmWR~~s~s~~~~k~~~~t~~v~~~sgLFp~ 315 (621)
T KOG0170|consen 244 EKYG--SSKAVLEIEYEEEVGT------GLGPTLEFYTLVSKEFQRASLGMWRCNSVSYRSGKPQENTKDVYITSGLFPR 315 (621)
T ss_pred HHhc--CCcceEEEEecccccc------CCCcceeeHHHHHHHHhhccccccccCceeeccCCCCCCcchhhhccccCCC
Confidence 9876 3478999999997775 679999999999999999999999863 11 378998
Q ss_pred CCCCCc----hhhHHHHHHHHHHHHHHHHHcCCcccccCcHHHHHhhhccCCCCCCCCCCCHHHHHHHHHHhh------c
Q 002025 697 PGSGMI----HEQHLQFFHFLGILLAKAMFEGILVDIPFATFFLSKLKQKYNYLNDLPSLDPELYRHLIFLKH------Y 766 (978)
Q Consensus 697 p~s~~~----~~~~l~~f~flG~llGkAL~~g~~ldl~fa~~f~k~Llg~~~tl~DL~~lDp~l~~sL~~Lk~------~ 766 (978)
|..... ++..+++|+++|+++||||++|+++|+||+++|||.++|.+.+..|+..+||++.++|..|.. .
T Consensus 316 P~~~ts~~se~~kvi~~F~~LG~~vAkal~D~Rildlpls~~Fykl~l~q~Lt~~dv~~vd~~l~~sL~~Le~vv~~k~~ 395 (621)
T KOG0170|consen 316 PWPPTSNSSENEKVIELFRLLGTFVAKALQDGRILDLPLSKAFYKLILGQELTSHDVTTVDPELAKSLLELELVVPRKKK 395 (621)
T ss_pred CCCCCCCchhHHHHHHHHHHHHHHHHHHHhcCceEeeeccHHHHHHHhcCCcccccceecCHHHHHHHHHHHHHhhhhhh
Confidence 865432 234678999999999999999999999999999999999999999999999999999987732 1
Q ss_pred ----cC--------------ccccceeeEEEEeccCCcceeeeccCCCcccccChhhHHHHHHHHHHHHHhhhHHHHHHH
Q 002025 767 ----EA--------------DISELELYFVILNNEYGEQTEEELLPGGKNIRVTNENVITFIHLVSNHRLNFQIRQQSSH 828 (978)
Q Consensus 767 ----~~--------------dvedL~L~Ftv~~~~~g~~~~veLip~G~~i~VT~eNk~eYI~l~~~~~l~~~i~~q~~a 828 (978)
-| .+|||+|+|+++.. ..+||+|||.+++||..|.+|||+.|+++.+.++|.+|++|
T Consensus 396 ~~~~~~d~~~a~~dltl~g~~iEdL~LdFTLPG~-----p~ieL~p~g~~~~V~~~NleEYi~~VId~tv~kGVqkQleA 470 (621)
T KOG0170|consen 396 LEKYIGDVANADDDLTLNGCSIEDLSLDFTLPGF-----PDIELIPGGANKPVTISNLEEYIHGVIDATVGKGVQKQLEA 470 (621)
T ss_pred hhhhcccccccccceeecCcchhhceeeEecCCC-----CCeeeccCCCCCccccccHHHHHHHHHHHHHhhhHHHHHHH
Confidence 11 25889999999843 46899999999999999999999999999999999999999
Q ss_pred HHhhcccccchhHHhhcCHHHHHHhHcCCCCCCCHHHHhhcccccCCcCCCcHHHHHHHHHHhcCCHHHHhhcceeecCc
Q 002025 829 FLRGFQQLIQKDWIDMFNEHELQLLISGSLDSLDFDDLRQNTNYVGGYHSEHYVIEMFWEVLKSFSLENQKKFLKFVTGC 908 (978)
Q Consensus 829 F~~Gf~~Vip~~~L~~F~p~EL~~Li~G~~~~iD~~dL~~~t~y~ggy~~~~~~I~~FWevl~~fs~eer~kfL~FvTGs 908 (978)
|+.||.+|.|-+.|++|+|+||..++||..+.|+++.|.+|.+.+|||+.++|+|+.+.++++.|+.||||.||||||||
T Consensus 471 Fr~GF~~VF~~~~Lqif~p~EL~~llcg~~e~ws~~TL~~~i~~DHGYT~~Sp~i~~li~ils~f~~~qQR~FLQFvTGS 550 (621)
T KOG0170|consen 471 FRSGFSSVFPYEHLQIFTPEELVTLLCGVEEDWSMATLMEHIKADHGYTMDSPIIHDLISILSAFDKEQQRLFLQFVTGS 550 (621)
T ss_pred HHhhhhhccchhheeecCHHHHHHHhccchhhccHHHHHHhcccccCccCCCcHHHHHHHHhhhhchHHHHHHHHHhcCC
Confidence 99999999999999999999999999999889999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCcccCCCceeEeecCCCCCCcCCCCCceeccccCeeecCCCCCHHHHHHHHHHHHHcCCC-ccCC
Q 002025 909 SRGPLLGFKYLEPLFCIQRAAGSASEEALDRLPTSATCMNLLKLPPYRSKEQMSTKLLYAINAEAG-FDLS 978 (978)
Q Consensus 909 sRlP~~Gf~~L~p~f~I~~~~~~~~~~~~~rLPtA~TCfN~L~LP~Yss~e~LreKL~~AI~~~~G-F~LS 978 (978)
+|+|+|||+.|+|+++|++...+..+.+++.||+++||.|+||||+|+|+|+||+||.|||++|+| |+||
T Consensus 551 prLPiGGfasLNPklTIVrKh~e~~~t~Dd~LPSVMTCaNYLKLP~YSSkEiM~~kL~~Ai~EGqgSFhLS 621 (621)
T KOG0170|consen 551 PRLPIGGFASLNPKLTIVRKHAEDSETPDDYLPSVMTCANYLKLPPYSSKEIMRSKLLYAIEEGQGSFHLS 621 (621)
T ss_pred CCCCCCcccccCCCeEEEeccCCCCCCcccccchHHHHHhhhcCCCCchHHHHHHHHHHHHHccccccccC
Confidence 999999999999999999999777788899999999999999999999999999999999999987 9997
No 9
>PF00632 HECT: HECT-domain (ubiquitin-transferase); InterPro: IPR000569 The name HECT comes from 'Homologous to the E6-AP Carboxyl Terminus' []. Proteins containing this domain at the C terminus include ubiquitin-protein ligase, which regulates ubiquitination of CDC25. Ubiquitin-protein ligase accepts ubiquitin from an E2 ubiquitin-conjugating enzyme in the form of a thioester, and then directly transfers the ubiquitin to targeted substrates. A cysteine residue is required for ubiquitin-thiolester formation. Human thyroid receptor interacting protein 12, which also contains this domain, is a component of an ATP-dependent multisubunit protein that interacts with the ligand binding domain of the thyroid hormone receptor. It could be an E3 ubiquitin-protein ligase. Human ubiquitin-protein ligase E3A interacts with the E6 protein of the cancer-associated Human papillomavirus type 16 and Human papillomavirus type 18. The E6/E6-AP complex binds to and targets the P53 tumour-suppressor protein for ubiquitin-mediated proteolysis.; GO: 0016881 acid-amino acid ligase activity, 0006464 protein modification process, 0005622 intracellular; PDB: 3TUG_A 1ZVD_A 1C4Z_C 1D5F_B 1ND7_A 2XBB_A 2XBF_A 3PT3_A 3G1N_B 3H1D_A ....
Probab=100.00 E-value=7e-65 Score=567.68 Aligned_cols=304 Identities=44% Similarity=0.729 Sum_probs=256.4
Q ss_pred HHHHHHhhcccCCCceecC-CCceecCCCCC------CchhhHHHHHHHHHHHHHHHHHcCCcccccCcHHHHHhhh-cc
Q 002025 671 ENITRAAFDVQYGLFKETS-DHLLYPNPGSG------MIHEQHLQFFHFLGILLAKAMFEGILVDIPFATFFLSKLK-QK 742 (978)
Q Consensus 671 ~~l~~e~fdp~~gLF~~t~-~~~lypnp~s~------~~~~~~l~~f~flG~llGkAL~~g~~ldl~fa~~f~k~Ll-g~ 742 (978)
+++++|+|+|++|||..++ ++.++|||... ...+.++++|+++|+++|+||++|.+++++||++|||+|+ |.
T Consensus 1 ~l~~~el~~~~~~lF~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lG~lig~ai~~~~~l~~~f~~~~~k~l~~g~ 80 (317)
T PF00632_consen 1 TLLCKELFDPNLGLFYQTSNNGLFWPNPNSNRDSPSPASSEEHLKMFRFLGRLIGKAIRNGIPLPLPFSPAFWKYLLSGE 80 (317)
T ss_dssp HHHHHHHTSGGGSSEESSTTTCEEEEECCH----TTGGGSTTHHHHHHHHHHHHHHHHHTTS-ESSEB-HHHHHHHT-T-
T ss_pred CHHHHHhcCccCCCceEcCCCCEEeCCCcccccccccccCHHHHHHHHHHHHHHHHHHHcCCccccCcCHHHHHHHhcCC
Confidence 5799999999999997655 55677887521 1234678899999999999999999999999999999999 99
Q ss_pred CCCCCCCCCCCHHHHHHHHHHhhccC---ccccceeeEEEEec-cCCcceeeeccCCCcccccChhhHHHHHHHHHHHHH
Q 002025 743 YNYLNDLPSLDPELYRHLIFLKHYEA---DISELELYFVILNN-EYGEQTEEELLPGGKNIRVTNENVITFIHLVSNHRL 818 (978)
Q Consensus 743 ~~tl~DL~~lDp~l~~sL~~Lk~~~~---dvedL~L~Ftv~~~-~~g~~~~veLip~G~~i~VT~eNk~eYI~l~~~~~l 818 (978)
+++++|++++||+++++|.++++++. ++++++++|++... ..|...++||+|||++++||.+||.+||+++++|++
T Consensus 81 ~~t~~Dl~~iD~~~~~sl~~l~~~~~~~~~~~~l~l~F~~~~~~~~~~~~~~eL~~~G~~~~Vt~~N~~eyv~~~~~~~l 160 (317)
T PF00632_consen 81 PLTLEDLEEIDPELYKSLKKLLDMDNDEEDVEDLDLTFSVPSSSGGGQVEEVELIPGGSNIPVTNENKEEYVRLLAQYRL 160 (317)
T ss_dssp ---HHHHHCCSHHHHHHHHHHHHSHSGSCTTSGCTEBSEEEEEECTTEEEEEESSTTGGGSB-TTTTHHHHHHHHHHHHH
T ss_pred CCccccchhcCchhhcchhhheeccccccceeecceEEEEecccccCceeEeeecCCCcccccchhhhhHHHHhhhhhhc
Confidence 99999999999999999999997653 36789999998644 345567899999999999999999999999999999
Q ss_pred hhhHHHHHHHHHhhcccccchhHHhhcCHHHHHHhHcCCCCCCCHHHHhhcccccCCcCCCcHHHHHHHHHHhcCCHHHH
Q 002025 819 NFQIRQQSSHFLRGFQQLIQKDWIDMFNEHELQLLISGSLDSLDFDDLRQNTNYVGGYHSEHYVIEMFWEVLKSFSLENQ 898 (978)
Q Consensus 819 ~~~i~~q~~aF~~Gf~~Vip~~~L~~F~p~EL~~Li~G~~~~iD~~dL~~~t~y~ggy~~~~~~I~~FWevl~~fs~eer 898 (978)
+++++.|++||++||.+|+|..++++|+|+||+.++||.++.||+++|+++++|++||++++++|+|||+++++||++||
T Consensus 161 ~~~~~~~~~~~r~Gf~~vi~~~~l~~f~~~eL~~l~~G~~~~i~~~~l~~~~~~~~g~~~~~~~i~~fw~vl~~~s~~~~ 240 (317)
T PF00632_consen 161 NESVKKQLEAFRKGFYSVIPLELLSLFSPEELERLLCGSPEPIDVEDLKSNTRYEGGYTESSPVIQWFWEVLEEFSQEER 240 (317)
T ss_dssp TTTTHHHHHHHHHHHHHHSSHHHHTTSSHHHHHHHHHCBSS---HHHHHHTEEEESSS-TTSHHHHHHHHHHHHS-HHHH
T ss_pred ccccchhHHHHhcchhhcchhHHHHcCCHHHHHHHhcCccccCCHHHHHhcccchhccccccceeeEEeeeeccCCHHHh
Confidence 99999999999999999999999999999999999999864499999999999999999999999999999999999999
Q ss_pred hhcceeecCcCCCCCCCcccCCCceeEeecCCCCCCcCCCCCceeccccCeeecCCCCCHHHHHHHHHHHHHcC-CCccC
Q 002025 899 KKFLKFVTGCSRGPLLGFKYLEPLFCIQRAAGSASEEALDRLPTSATCMNLLKLPPYRSKEQMSTKLLYAINAE-AGFDL 977 (978)
Q Consensus 899 ~kfL~FvTGssRlP~~Gf~~L~p~f~I~~~~~~~~~~~~~rLPtA~TCfN~L~LP~Yss~e~LreKL~~AI~~~-~GF~L 977 (978)
++||+|+||++|+|++||+.++|+|+|+..+.. ++++||+||||||.|+||.|+|+|+|||||++||+++ +||+|
T Consensus 241 ~~fL~F~TG~~~lP~~G~~~l~~~i~i~~~~~~----~~~~LP~a~TCf~~L~LP~Yss~e~l~~kL~~Ai~~~~~gF~~ 316 (317)
T PF00632_consen 241 RKFLRFVTGSSRLPPGGFSNLNPKITIQFSDDS----PDDRLPTAHTCFNTLKLPRYSSKEILREKLLYAIENGQEGFGL 316 (317)
T ss_dssp HHHHHHHHSSSSB-TTGGGGGE-EEEEEEESC-----STTS--EEEGGGTEEEEEE-SSHHHHHHHHHHHHHHT------
T ss_pred heeEEEecCCCCCCccccccccceeEEeecCCC----ccccCceecCcCCEEECCCCCCHHHHHHHHHHHHHcCCCCcCc
Confidence 999999999999999999999999999987642 2469999999999999999999999999999999999 89999
Q ss_pred C
Q 002025 978 S 978 (978)
Q Consensus 978 S 978 (978)
|
T Consensus 317 s 317 (317)
T PF00632_consen 317 S 317 (317)
T ss_dssp -
T ss_pred C
Confidence 8
No 10
>KOG0940 consensus Ubiquitin protein ligase RSP5/NEDD4 [Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=2e-50 Score=450.31 Aligned_cols=339 Identities=35% Similarity=0.636 Sum_probs=318.9
Q ss_pred cceeeEEEeCCchHHHHHHHHhcCCccccCccEEEEEEeccCcccccccCCCchHHHHHHHHHHhhcccCCCceecCC-C
Q 002025 613 FTRSRFRIRRDHILEDAYSQMSTMSEEDLRGAIRVTFVNELGVEEAGIDGGGIFKDFMENITRAAFDVQYGLFKETSD-H 691 (978)
Q Consensus 613 ~~r~~i~VrR~~ileDa~~~L~~~~~~~lk~~L~V~F~~E~G~~E~GiD~GGv~REFf~~l~~e~fdp~~gLF~~t~~-~ 691 (978)
....+++|+|++++||+|+++...++.++|+.+.+.|.+ |+|.|.||+.||||..+++++|+|.+++|..+.+ .
T Consensus 14 ~~~~~~~~~~~~~~e~~f~~iM~~~~~~~~~~l~~~~~~-----ee~ldy~glprewf~~lS~e~~~p~~~~~~~~~~~~ 88 (358)
T KOG0940|consen 14 PQQSHHKVDRDHLLEDSFNQIMNPKPSDLQKRLMREFKG-----EEGLDYGGLPREWFFLLSHEGFNPWYGLFQHSRKDY 88 (358)
T ss_pred CceeEEEechhhhHHHHHHHHhCCCchhhhhcceeeccc-----ccccccCCCCcceeeeeccccCCcceeeeeeccccc
Confidence 345689999999999999999999999999999999999 7889999999999999999999999999999887 4
Q ss_pred ceecCCCCCCchhhHHHHHHHHHHHHHHHHHcCCcccccCcHHHHHhhhccCCCCCCCCCCCHHHHHHHHHHhhccCccc
Q 002025 692 LLYPNPGSGMIHEQHLQFFHFLGILLAKAMFEGILVDIPFATFFLSKLKQKYNYLNDLPSLDPELYRHLIFLKHYEADIS 771 (978)
Q Consensus 692 ~lypnp~s~~~~~~~l~~f~flG~llGkAL~~g~~ldl~fa~~f~k~Llg~~~tl~DL~~lDp~l~~sL~~Lk~~~~dve 771 (978)
.++.+|.++ ++++|+.+|.|+|+.+|+|++++..++-- -.+|||.+++++.+++|.+.+|++.|+++.++++++ +.
T Consensus 89 tlq~~P~sg-~~p~~l~~~~~vg~~~~l~~~h~~~~~~g-~r~F~~~i~~ktt~ldd~e~~d~e~~~s~~~~~en~--~~ 164 (358)
T KOG0940|consen 89 TLWLNPRSG-VNPGHLTYFRFVGGVLALAGWHMRFTDTG-QRPFYKHILKKTTTLDDREAVDPEFYNSLTWIREND--PT 164 (358)
T ss_pred ccccCCccC-CCCCcccccccccccccccceeeEecCCC-ceehhhhhhcCccccCchhhcCccccccccccccCC--cc
Confidence 999999998 88999999999999999999999998886 889999999999999999999999999999998644 33
Q ss_pred cceeeEEEEeccCCcceeeeccCCCcccccChhhHHHHHHHHHHHHHhhhHHHHHHHHHhhcccccchhHHhhcCHHHHH
Q 002025 772 ELELYFVILNNEYGEQTEEELLPGGKNIRVTNENVITFIHLVSNHRLNFQIRQQSSHFLRGFQQLIQKDWIDMFNEHELQ 851 (978)
Q Consensus 772 dL~L~Ftv~~~~~g~~~~veLip~G~~i~VT~eNk~eYI~l~~~~~l~~~i~~q~~aF~~Gf~~Vip~~~L~~F~p~EL~ 851 (978)
. +++|+++...+|...+.+|+|||.++.||.+|+++||.++.+ +....+.+|.++|.+||..++|..++++|.+.|++
T Consensus 165 ~-~~~f~~~~~~~g~~~~~~l~p~g~~~~v~~~n~~~yi~~l~~-r~~~~~~~q~~~l~~~~~~~~p~~~~~~~~e~~~e 242 (358)
T KOG0940|consen 165 N-DLTFSVESEVLGQITTQELKPNGANIQVTEENKKEYIMLLQN-RFERGIQEQLKALLQGFNELLPQSLLRIFDEMELE 242 (358)
T ss_pred c-chhhhcchhhcCCccceeecCCCcccccccccHHHHHHHHHH-HHHHHHHHHHHHHhccccccCCcccccccchhhHH
Confidence 3 999999999999999999999999999999999999999999 88899999999999999999999999999999999
Q ss_pred HhHcCCCCCCCHHHHhhcccccCCcCCCcHHHHHHHHHHhcCCHHHHhhcceeecCcCCCCCCCcccCCC-----ceeEe
Q 002025 852 LLISGSLDSLDFDDLRQNTNYVGGYHSEHYVIEMFWEVLKSFSLENQKKFLKFVTGCSRGPLLGFKYLEP-----LFCIQ 926 (978)
Q Consensus 852 ~Li~G~~~~iD~~dL~~~t~y~ggy~~~~~~I~~FWevl~~fs~eer~kfL~FvTGssRlP~~Gf~~L~p-----~f~I~ 926 (978)
.++||..+ +|+++|++++.|. +|+.+|++|.|||+.+.++++++|.+.++|+||++|+|..||+.+.. .|+|.
T Consensus 243 ~~~~~~~~-~~~~d~~~~t~~~-~~~~~~~~i~wf~~~v~~~~~~~r~r~l~~~tg~~~vp~~~~~~l~~s~~~~~~~ie 320 (358)
T KOG0940|consen 243 LALSGDPE-IDVNDWKQNTEYR-GYSETDRQIDWFWNNVDEMDNEERIRLLQFVTGTSRVPVEGFAILSGSNGPRKFCIE 320 (358)
T ss_pred HHhcCCcc-cchhHHhhhcccc-cccCCccccHHHHHhhhhcChHHHHhhhhccCCCccccccchhhccCCCccCceeec
Confidence 99999865 9999999999998 89999999999999999999999999999999999999999999875 68888
Q ss_pred ecCCCCCCcCCCCCceeccccCeeecCCCCCHHHHHHHHHHHHH
Q 002025 927 RAAGSASEEALDRLPTSATCMNLLKLPPYRSKEQMSTKLLYAIN 970 (978)
Q Consensus 927 ~~~~~~~~~~~~rLPtA~TCfN~L~LP~Yss~e~LreKL~~AI~ 970 (978)
+.+ ..+++|.+|||||.|++|.|.+++.|++|+..||+
T Consensus 321 ~~~------~~~~~p~~htcfnrld~~~~~s~~~L~~kl~~ai~ 358 (358)
T KOG0940|consen 321 KWG------KSTQLPRSHTCFNRLDLPPYESYEPLREKLLLAIE 358 (358)
T ss_pred Ccc------cccccchhcccccccccccccchhHHHHHHHHhcC
Confidence 733 24799999999999999999999999999999984
No 11
>KOG0943 consensus Predicted ubiquitin-protein ligase/hyperplastic discs protein, HECT superfamily [Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=6.1e-36 Score=348.19 Aligned_cols=261 Identities=25% Similarity=0.424 Sum_probs=220.8
Q ss_pred hhHHHHHHHHHHHHHHHHHcCCcccccCcHHHHHhhhccCCCCCCCCCCCHHHHHHHHHHhhcc------CccccceeeE
Q 002025 704 EQHLQFFHFLGILLAKAMFEGILVDIPFATFFLSKLKQKYNYLNDLPSLDPELYRHLIFLKHYE------ADISELELYF 777 (978)
Q Consensus 704 ~~~l~~f~flG~llGkAL~~g~~ldl~fa~~f~k~Llg~~~tl~DL~~lDp~l~~sL~~Lk~~~------~dvedL~L~F 777 (978)
+-.+..|+-+|||+|.|+..|-+.++.|+..++|.++|.++...|+..+||.+|++|..|-... .|...+++.|
T Consensus 2739 ~~RLaafRniGRIlGiCL~Qgdi~PirfnRHifk~iL~l~icW~Df~FfDPVlfenLRaLfkAhpsSd~DadFS~md~aa 2818 (3015)
T KOG0943|consen 2739 EARLAAFRNIGRILGICLLQGDICPIRFNRHIFKVILGLKICWHDFAFFDPVLFENLRALFKAHPSSDADADFSAMDLAA 2818 (3015)
T ss_pred HHHHHHHHhhhhHhhhhhhcCcccceeehhHHHHHHhcCceehhhhccccHHHHHHHHHHHhcCCcccccchhhHHHHhh
Confidence 4568889999999999999999999999999999999999999999999999999999874321 2233344444
Q ss_pred EEE--eccCCcceeeeccCCCcccccChhhHHHHHHHHHHHHHhhhHHHHHHHHHhhcccccchhHHhhcCHHHHHHhHc
Q 002025 778 VIL--NNEYGEQTEEELLPGGKNIRVTNENVITFIHLVSNHRLNFQIRQQSSHFLRGFQQLIQKDWIDMFNEHELQLLIS 855 (978)
Q Consensus 778 tv~--~~~~g~~~~veLip~G~~i~VT~eNk~eYI~l~~~~~l~~~i~~q~~aF~~Gf~~Vip~~~L~~F~p~EL~~Li~ 855 (978)
..+ .++ +..+++|+|||.+|+||.+|+.|||.+|++++|...-...++|+|+|+-.|||.+.|.-++++++.++||
T Consensus 2819 ~gdlckee--~a~qVeL~PNGdeilVnkdNViEYV~KYAE~~llgk~~i~feAiReGiLDViPenmL~~LT~EDfRLiic 2896 (3015)
T KOG0943|consen 2819 AGDLCKEE--GAGQVELIPNGDEILVNKDNVIEYVRKYAEHRLLGKAEIPFEAIREGILDVIPENMLEDLTAEDFRLIIC 2896 (3015)
T ss_pred ccchhhhc--CceeEEEecCCceeeecchhHHHHHHHHHHhhhheeeeccHHHHHHhHHhhcchhhhcccCHhHheeeee
Confidence 432 111 3457999999999999999999999999999999877778999999999999999999999999999999
Q ss_pred CCCCCCCHHHHhhcccccCCcCCCc----HHHHHHHHHHhcCCHHHHhhcceeecCcCCCCCCC--cccCCCceeEeecC
Q 002025 856 GSLDSLDFDDLRQNTNYVGGYHSEH----YVIEMFWEVLKSFSLENQKKFLKFVTGCSRGPLLG--FKYLEPLFCIQRAA 929 (978)
Q Consensus 856 G~~~~iD~~dL~~~t~y~ggy~~~~----~~I~~FWevl~~fs~eer~kfL~FvTGssRlP~~G--f~~L~p~f~I~~~~ 929 (978)
|.. ++++.-|.++|-|...-.++. +.-+|||+|+++|+..||+.+..|+|||+.+|..| |... +.+.|+.
T Consensus 2897 G~e-eVniqmL~e~TgFlDES~anaEkL~qFKqWFWqiiEkfs~qEkQdLVfFWTgSPaLPAa~e~~p~~-aSimiRP-- 2972 (3015)
T KOG0943|consen 2897 GCE-EVNIQMLIEFTGFLDESGANAEKLLQFKQWFWQIIEKFSMQEKQDLVFFWTGSPALPAAEEGFPPM-ASIMIRP-- 2972 (3015)
T ss_pred ccc-ceehhHhhhhccccccccccHHHHHHHHHHHHHHHHHHhhhhhccEEEEecCCCCCCccccCCCCC-CceeecC--
Confidence 986 499999999997753322333 35679999999999999999999999999999975 5432 4455553
Q ss_pred CCCCCcCCCCCceeccccCeeecCCCCCHHHHHHHHHHHHHcCC-Cc
Q 002025 930 GSASEEALDRLPTSATCMNLLKLPPYRSKEQMSTKLLYAINAEA-GF 975 (978)
Q Consensus 930 ~~~~~~~~~rLPtA~TCfN~L~LP~Yss~e~LreKL~~AI~~~~-GF 975 (978)
. ++..||||.||..+|..|.|+||++||+||+.||..-. ||
T Consensus 2973 ~-----dD~fLPTANTCISRLYVPlYSSKqiLkqKLLLAIKaKNFGF 3014 (3015)
T KOG0943|consen 2973 P-----DDQFLPTANTCISRLYVPLYSSKQILKQKLLLAIKAKNFGF 3014 (3015)
T ss_pred c-----ccccCCcccchhhheeeechhhHHHHHHHHHHhhhcccccc
Confidence 2 24689999999999999999999999999999998753 55
Done!