Query 002026
Match_columns 978
No_of_seqs 319 out of 1065
Neff 5.6
Searched_HMMs 29240
Date Mon Mar 25 09:13:42 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/002026.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/002026hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3hfh_A Transcription elongatio 100.0 1.3E-39 4.5E-44 336.3 14.1 188 572-763 1-190 (190)
2 3hfh_A Transcription elongatio 99.9 1.5E-25 5.2E-30 231.3 13.4 184 644-869 6-190 (190)
3 2l5f_A PRE-mRNA-processing fac 99.8 9.8E-20 3.3E-24 167.1 4.8 81 353-444 10-90 (92)
4 2jxw_A WW domain-binding prote 99.8 8.6E-19 2.9E-23 155.0 7.6 71 357-438 5-75 (75)
5 2dod_A Transcription elongatio 99.7 1E-18 3.6E-23 156.5 4.5 71 568-639 9-79 (82)
6 1uzc_A Hypothetical protein FL 99.7 2.1E-17 7.2E-22 144.2 6.2 63 569-631 8-70 (71)
7 2kxq_A E3 ubiquitin-protein li 99.6 3.8E-16 1.3E-20 142.8 9.1 80 353-438 8-87 (90)
8 1o6w_A PRP40, PRE-mRNA process 99.6 4.3E-17 1.5E-21 143.9 1.4 71 357-438 2-72 (75)
9 1tk7_A CG4244-PB; WW domain, n 99.6 7.2E-16 2.5E-20 140.3 8.4 79 351-437 9-87 (88)
10 2b7e_A PRE-mRNA processing pro 99.6 3.8E-16 1.3E-20 130.5 3.8 55 575-629 2-58 (59)
11 2dof_A Transcription elongatio 99.6 2.4E-16 8E-21 139.9 0.7 76 805-881 8-83 (85)
12 2juc_A PRE-mRNA-splicing facto 99.4 1.7E-13 5.7E-18 114.5 3.2 53 576-628 6-58 (59)
13 2doe_A Transcription elongatio 99.3 6.8E-13 2.3E-17 119.4 6.2 68 567-634 8-75 (83)
14 2dk7_A Transcription elongatio 99.2 1.1E-11 3.7E-16 107.4 3.5 44 398-441 9-52 (73)
15 1e0l_A Formin binding protein; 99.0 1.7E-10 5.7E-15 88.4 4.5 33 356-388 5-37 (37)
16 2ysi_A Transcription elongatio 99.0 2.3E-10 7.8E-15 89.1 4.7 37 351-387 4-40 (40)
17 2doe_A Transcription elongatio 98.9 3.3E-10 1.1E-14 101.9 1.1 58 710-768 16-74 (83)
18 1ywi_A Formin-binding protein 98.9 7.8E-10 2.7E-14 86.6 2.7 36 351-386 6-41 (41)
19 2dk7_A Transcription elongatio 98.9 2.8E-10 9.7E-15 98.6 0.0 34 358-391 21-54 (73)
20 2cqn_A Formin-binding protein 98.8 4.8E-09 1.7E-13 93.0 7.5 59 574-632 7-67 (77)
21 1e0l_A Formin binding protein; 98.8 2.4E-09 8.2E-14 82.0 3.7 34 407-440 4-37 (37)
22 2cqn_A Formin-binding protein 98.7 1.6E-08 5.5E-13 89.7 7.3 57 711-767 9-67 (77)
23 2dk1_A WW domain-binding prote 98.7 7E-09 2.4E-13 84.5 4.4 37 357-393 7-43 (50)
24 2ysh_A GAS-7, growth-arrest-sp 98.7 1E-08 3.4E-13 79.7 4.9 34 353-386 6-39 (40)
25 1e0m_A Wwprototype; SH3 protot 98.7 7.6E-09 2.6E-13 78.9 4.1 33 354-386 3-35 (37)
26 2dof_A Transcription elongatio 98.7 1.1E-08 3.7E-13 91.1 5.4 68 869-948 13-83 (85)
27 1wr3_A Ubiquitin-protein ligas 98.7 9.6E-09 3.3E-13 78.0 4.2 33 353-385 3-35 (36)
28 2kyk_A E3 ubiquitin-protein li 98.7 1.2E-08 3.9E-13 79.0 4.7 35 351-385 3-37 (39)
29 1ymz_A CC45; artificial protei 98.6 1.6E-08 5.6E-13 79.8 4.2 35 354-388 8-42 (43)
30 2ysi_A Transcription elongatio 98.6 1.4E-08 5E-13 79.0 3.6 31 409-439 10-40 (40)
31 1wr4_A Ubiquitin-protein ligas 98.6 2E-08 6.7E-13 76.1 3.9 33 353-385 3-35 (36)
32 2law_A Yorkie homolog; YAP, SM 98.6 2E-08 6.7E-13 77.3 3.0 34 352-385 4-37 (38)
33 2dmv_A Itchy homolog E3 ubiqui 98.6 4.2E-08 1.4E-12 77.5 4.5 34 353-386 6-39 (43)
34 1wr7_A NEDD4-2; all-beta, liga 98.6 3.7E-08 1.3E-12 77.0 3.8 33 353-385 7-39 (41)
35 2ysg_A Syntaxin-binding protei 98.5 5.1E-08 1.7E-12 75.9 4.4 33 353-385 6-38 (40)
36 1uzc_A Hypothetical protein FL 98.5 1.2E-07 4E-12 82.9 6.5 54 643-698 15-69 (71)
37 1ymz_A CC45; artificial protei 98.5 4.1E-08 1.4E-12 77.5 3.1 31 409-439 11-41 (43)
38 1ywi_A Formin-binding protein 98.5 6.1E-08 2.1E-12 75.8 3.7 30 409-438 12-41 (41)
39 2jv4_A Peptidyl-prolyl CIS/tra 98.5 7.1E-08 2.4E-12 79.9 4.1 35 353-387 6-41 (54)
40 2dk1_A WW domain-binding prote 98.5 2.6E-08 8.9E-13 81.1 1.3 35 408-442 6-40 (50)
41 2ysf_A E3 ubiquitin-protein li 98.5 9.8E-08 3.4E-12 74.3 4.3 35 352-386 5-39 (40)
42 2kpz_A E3 ubiquitin-protein li 98.5 8.6E-08 2.9E-12 77.8 3.9 36 352-387 10-45 (49)
43 2dod_A Transcription elongatio 98.5 9.4E-08 3.2E-12 85.7 4.4 56 712-768 18-73 (82)
44 2djy_A SMAD ubiquitination reg 98.4 1.1E-07 3.8E-12 74.8 3.8 34 353-386 6-39 (42)
45 2l4j_A YES-associated protein 98.4 1.5E-07 5.1E-12 75.5 4.6 35 352-386 9-43 (46)
46 1e0n_A Hypothetical protein; Y 98.4 8.5E-08 2.9E-12 68.4 2.8 27 357-384 1-27 (27)
47 2ez5_W Dnedd4, E3 ubiquitin-pr 98.4 1.5E-07 5.1E-12 75.5 4.3 34 353-386 9-42 (46)
48 1i5h_W Rnedd4, ubiquitin ligas 98.4 1.6E-07 5.6E-12 76.5 4.4 36 352-387 9-44 (50)
49 2ysb_A Salvador homolog 1 prot 98.4 1.7E-07 5.6E-12 76.2 3.9 34 354-387 11-44 (49)
50 2zaj_A Membrane-associated gua 98.4 1.7E-07 5.7E-12 76.1 3.9 36 351-386 10-45 (49)
51 1e0m_A Wwprototype; SH3 protot 98.4 2.5E-07 8.5E-12 70.5 4.4 33 405-438 3-35 (37)
52 2ho2_A Fe65 protein, amyloid b 98.3 3E-07 1E-11 70.7 3.9 32 354-386 3-34 (38)
53 2dwv_A Salvador homolog 1 prot 98.3 5.4E-07 1.9E-11 73.2 5.0 45 377-438 1-45 (49)
54 2jx8_A Hpcif1, phosphorylated 98.3 1.2E-07 4.1E-12 77.9 1.2 35 353-387 9-44 (52)
55 1wr7_A NEDD4-2; all-beta, liga 98.3 5.9E-07 2E-11 70.2 4.5 34 404-438 7-40 (41)
56 2ysh_A GAS-7, growth-arrest-sp 98.3 5.6E-07 1.9E-11 69.8 4.3 32 405-437 7-38 (40)
57 2ysc_A Amyloid beta A4 precurs 98.3 4E-07 1.4E-11 70.4 3.4 32 353-385 7-38 (39)
58 2jxw_A WW domain-binding prote 98.3 3.6E-07 1.2E-11 80.5 3.4 33 354-386 43-75 (75)
59 2yse_A Membrane-associated gua 98.3 4.5E-07 1.5E-11 76.6 3.6 36 351-386 10-45 (60)
60 2juc_A PRE-mRNA-splicing facto 98.3 5.9E-07 2E-11 75.2 4.1 50 713-763 8-58 (59)
61 1wr3_A Ubiquitin-protein ligas 98.3 6.5E-07 2.2E-11 67.9 4.0 32 405-437 4-35 (36)
62 1e0n_A Hypothetical protein; Y 98.2 6.5E-07 2.2E-11 63.8 3.4 26 410-436 2-27 (27)
63 2jmf_A E3 ubiquitin-protein li 98.2 6.8E-07 2.3E-11 73.7 4.0 34 353-386 17-50 (53)
64 2ysd_A Membrane-associated gua 98.2 9.3E-07 3.2E-11 74.0 4.4 37 351-387 11-47 (57)
65 2dwv_A Salvador homolog 1 prot 98.2 6.2E-07 2.1E-11 72.8 3.2 34 353-386 12-45 (49)
66 2law_A Yorkie homolog; YAP, SM 98.2 9.4E-07 3.2E-11 67.9 3.7 32 405-437 6-37 (38)
67 1wr4_A Ubiquitin-protein ligas 98.2 1.3E-06 4.3E-11 66.1 4.1 32 405-437 4-35 (36)
68 2kyk_A E3 ubiquitin-protein li 98.2 1.3E-06 4.3E-11 67.5 4.2 32 405-437 6-37 (39)
69 2e45_A Fe65 protein, amyloid b 98.2 8.5E-07 2.9E-11 72.8 3.2 34 352-386 17-50 (55)
70 2djy_A SMAD ubiquitination reg 98.2 1.6E-06 5.3E-11 68.2 4.6 33 405-438 7-39 (42)
71 2dmv_A Itchy homolog E3 ubiqui 98.1 1.9E-06 6.5E-11 68.0 4.2 33 405-438 7-39 (43)
72 2l5f_A PRE-mRNA-processing fac 98.1 5.4E-07 1.9E-11 82.5 1.2 34 355-388 53-86 (92)
73 2ysg_A Syntaxin-binding protei 98.1 2.2E-06 7.6E-11 66.6 4.1 32 405-437 7-38 (40)
74 1wmv_A WWOX, WW domain contain 98.1 3.7E-06 1.3E-10 69.6 5.7 37 352-388 9-45 (54)
75 2jv4_A Peptidyl-prolyl CIS/tra 98.1 2E-06 6.9E-11 71.2 4.0 34 405-439 7-41 (54)
76 2kpz_A E3 ubiquitin-protein li 98.1 2.4E-06 8.2E-11 69.3 4.2 33 405-438 12-44 (49)
77 2ysf_A E3 ubiquitin-protein li 98.1 3E-06 1E-10 65.8 4.4 33 405-438 7-39 (40)
78 2b7e_A PRE-mRNA processing pro 98.0 3.5E-06 1.2E-10 70.6 4.8 52 643-696 3-57 (59)
79 2ez5_W Dnedd4, E3 ubiquitin-pr 98.0 4.2E-06 1.5E-10 67.0 4.3 33 405-438 10-42 (46)
80 2jx8_A Hpcif1, phosphorylated 98.0 3.1E-06 1.1E-10 69.5 3.0 33 406-439 11-44 (52)
81 2l4j_A YES-associated protein 98.0 5.7E-06 2E-10 66.3 4.5 33 405-438 11-43 (46)
82 1i5h_W Rnedd4, ubiquitin ligas 98.0 6.3E-06 2.2E-10 67.2 4.7 33 405-438 11-43 (50)
83 2ysb_A Salvador homolog 1 prot 97.9 6E-06 2.1E-10 67.0 4.1 33 405-438 11-43 (49)
84 1o6w_A PRP40, PRE-mRNA process 97.9 4.6E-06 1.6E-10 73.2 3.7 33 354-386 40-72 (75)
85 3l4h_A E3 ubiquitin-protein li 97.9 9.4E-07 3.2E-11 82.8 -0.9 59 355-438 46-104 (109)
86 1jmq_A YAP65, 65 kDa YES-assoc 97.9 3.5E-06 1.2E-10 67.3 2.5 34 353-386 7-40 (46)
87 2zaj_A Membrane-associated gua 97.9 6.7E-06 2.3E-10 66.8 3.9 33 405-438 13-45 (49)
88 1tk7_A CG4244-PB; WW domain, n 97.9 5.6E-06 1.9E-10 75.1 3.3 33 353-385 55-87 (88)
89 2kxq_A E3 ubiquitin-protein li 97.9 7.1E-06 2.4E-10 74.7 3.8 35 352-386 53-87 (90)
90 2ho2_A Fe65 protein, amyloid b 97.8 1.4E-05 4.9E-10 61.4 4.2 31 406-438 4-34 (38)
91 2jmf_A E3 ubiquitin-protein li 97.8 1.4E-05 4.8E-10 65.9 4.0 33 405-438 18-50 (53)
92 2ysc_A Amyloid beta A4 precurs 97.8 1.6E-05 5.4E-10 61.5 4.0 31 405-437 8-38 (39)
93 2ysd_A Membrane-associated gua 97.8 1.8E-05 6.3E-10 66.1 4.2 33 405-438 14-46 (57)
94 2yse_A Membrane-associated gua 97.7 1.5E-05 5.3E-10 67.2 3.6 34 405-439 13-46 (60)
95 1jmq_A YAP65, 65 kDa YES-assoc 97.7 1.9E-05 6.6E-10 63.0 2.8 32 406-438 9-40 (46)
96 1wmv_A WWOX, WW domain contain 97.6 3.6E-05 1.2E-09 63.7 4.2 33 405-438 11-43 (54)
97 3tc5_A Peptidyl-prolyl CIS-tra 97.4 6.5E-05 2.2E-09 75.8 3.8 35 353-387 8-43 (166)
98 2e45_A Fe65 protein, amyloid b 97.3 0.00015 5.1E-09 59.7 3.6 31 405-437 19-49 (55)
99 3l4h_A E3 ubiquitin-protein li 97.3 0.00013 4.6E-09 68.4 3.7 35 352-386 70-104 (109)
100 3tc5_A Peptidyl-prolyl CIS-tra 96.7 0.00093 3.2E-08 67.4 4.1 34 405-439 9-43 (166)
101 1eg3_A Dystrophin; EF-hand lik 96.4 0.0013 4.6E-08 70.8 3.0 33 353-385 10-42 (261)
102 2kfd_A PRE-mRNA-processing pro 96.1 0.0085 2.9E-07 51.0 5.8 60 868-935 6-67 (69)
103 2kfd_A PRE-mRNA-processing pro 95.8 0.013 4.4E-07 49.9 5.5 53 575-627 10-67 (69)
104 2k85_A Glucocorticoid receptor 95.7 0.02 6.8E-07 49.2 6.2 57 642-700 8-68 (69)
105 3olm_A E3 ubiquitin-protein li 95.4 0.0052 1.8E-07 70.7 2.2 35 352-386 6-40 (429)
106 1eg3_A Dystrophin; EF-hand lik 94.9 0.013 4.6E-07 63.0 3.6 35 405-440 11-45 (261)
107 2k85_A Glucocorticoid receptor 94.1 0.059 2E-06 46.3 5.0 57 816-873 11-68 (69)
108 1yw5_A Peptidyl prolyl CIS/tra 93.9 0.039 1.3E-06 55.8 4.3 34 353-386 6-40 (177)
109 3olm_A E3 ubiquitin-protein li 92.3 0.041 1.4E-06 63.3 1.8 33 405-438 8-40 (429)
110 1yw5_A Peptidyl prolyl CIS/tra 89.1 0.24 8.1E-06 50.1 3.7 34 406-440 8-42 (177)
111 3le4_A Microprocessor complex 80.1 1.8 6E-05 37.7 4.3 35 405-440 28-62 (79)
112 3le4_A Microprocessor complex 75.3 2.7 9.2E-05 36.6 4.1 40 350-389 24-63 (79)
113 2v8f_C MDIA1, profilin IIA; al 72.6 2.5 8.5E-05 29.2 2.6 17 178-194 5-21 (26)
114 4gyx_A Type III collagen fragm 68.5 4.7 0.00016 28.4 3.3 14 181-194 12-25 (31)
115 3vkg_A Dynein heavy chain, cyt 38.4 8.1E+02 0.028 35.2 20.1 44 831-874 2085-2139(3245)
116 3obv_E Protein diaphanous homo 38.2 3.5E+02 0.012 31.0 14.3 38 732-771 345-382 (457)
117 1v9d_A Diaphanous protein homo 37.3 2.5E+02 0.0085 30.7 12.5 38 732-771 274-311 (340)
118 2v8f_C MDIA1, profilin IIA; al 36.7 23 0.00079 24.5 2.4 7 179-185 3-9 (26)
119 3q7m_A Lipoprotein YFGL, BAMB; 35.0 36 0.0012 36.4 5.1 61 364-435 284-344 (376)
120 3q7m_A Lipoprotein YFGL, BAMB; 32.9 28 0.00095 37.3 3.8 62 364-437 110-171 (376)
121 1w8x_P Protein P16, protein S, 27.5 33 0.0011 30.6 2.6 35 264-298 35-69 (117)
122 3ecq_A Protein SPR0328, endo-a 27.4 17 0.00058 46.6 1.0 25 417-441 943-967 (1531)
123 1f5n_A Interferon-induced guan 27.2 8.4E+02 0.029 28.9 19.4 18 753-770 519-536 (592)
124 1f5n_A Interferon-induced guan 26.0 8.8E+02 0.03 28.7 26.4 28 859-886 519-546 (592)
125 2j1d_G DAAM1, disheveled-assoc 25.6 3.4E+02 0.012 31.2 11.5 39 731-771 356-394 (483)
126 3qf7_D MRE11; ABC-ATPase, ATPa 24.2 53 0.0018 25.7 2.8 32 857-888 6-40 (50)
127 2zxq_A Endo-alpha-N-acetylgala 20.5 27 0.00091 45.2 0.9 26 417-442 705-730 (1376)
128 1nkp_A C-MYC, MYC proto-oncoge 20.2 4.5E+02 0.015 23.2 10.2 19 751-769 43-61 (88)
No 1
>3hfh_A Transcription elongation regulator 1; helix bundle, activator, alternative splicing, coiled coil, nucleus, phosphoprotein, repressor; HET: MLY; 2.70A {Homo sapiens} PDB: 2kis_A 2e71_A 2kiq_A
Probab=100.00 E-value=1.3e-39 Score=336.34 Aligned_cols=188 Identities=37% Similarity=0.638 Sum_probs=159.8
Q ss_pred CCCHHHHHHHHHHHHHhcCCCCCCchHhhhcccccCchhhcccChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 002026 572 GPTKEECIIKFKEMLKERGVAPFSKWEKELPKIVFDPRFKAIQSQSARRALFERYVKTRAEEERKEKRAAQKAAIEGFKQ 651 (978)
Q Consensus 572 ~~skEEak~aFkeLLkE~~V~~~stWekal~kI~~DPRY~aL~s~~ERKqlFeeYi~er~keEreEkr~k~k~Ake~F~~ 651 (978)
|+++|||+++|++||++++|+++|+|+++|++|++||||.+| +..+||++|++||.+++++++++++.+.+.++++|++
T Consensus 1 ~~s~ee~~~~F~~lL~~~~V~~~~~We~~~~~i~~Dpry~al-~~~eRk~~f~~y~~~r~~ee~~ek~~~~~~ar~~F~~ 79 (190)
T 3hfh_A 1 GPLGSARMXQFXDMLLERGVSAFSTWEXELHXIVFDPRYLLL-NPXERXQVFDQYVXTRAEEERREXXNXIMQAXEDFXX 79 (190)
T ss_dssp -CCSCHHHHHHHHHHHHTTCCSSSCHHHHGGGTTTSGGGGGS-CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred CCCHHHHHHHHHHHHHHcCcCCCCchhhhhhhhccCcchhcC-ChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 478999999999999999999999999999999999999999 7999999999999999999999999999999999999
Q ss_pred HHHhhhcCCCCCccHHHHHHHhcCCchhccCCH-HHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHhhhcCCCCCC
Q 002026 652 LLEEVSEDIDHSTDYQTFKKKWGSDPRFEALDR-KDRELLLNERVLPLKRAAEEKAQAIRAAAASSFKSMLREKGDITLS 730 (978)
Q Consensus 652 LLee~~~~I~~~T~W~e~~kk~~~DpRfkaLd~-~ERE~LF~EyI~~LKk~eeEk~r~~Rk~a~~~Fk~LL~e~~~It~~ 730 (978)
||++. .|+++++|.+|.++|.+||||++|.. .||++||++||..|+++++++++..+++++++|.+||.++ .|++.
T Consensus 80 lL~e~--~i~~~~~w~~~~~~~~~Dpr~~~~~~~~eR~~lF~eyi~~lkk~e~e~~~~~r~~~~~~f~~lL~~~-~l~~~ 156 (190)
T 3hfh_A 80 MMEEA--XFNPRATFSEFAAXHAXDSRFXAIEXMXDREALFNEFVAAARXXEXEDSXTRGEXIXSDFFELLSNH-HLDSQ 156 (190)
T ss_dssp -----------------------TCCTTTTSCTTTTTTTTHHHHHHHHSTTTTTHHHHTHHHHHHHHHHHHHTS-CCCTT
T ss_pred HHHHc--CCCCCCCHHHHHHHhCCCchhhcCccchHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHhC-CCCCC
Confidence 99986 49999999999999999999999987 9999999999999999988888888899999999999999 89999
Q ss_pred CChHHHHHHhccCchhhcCCcc-cHHHHHHHHHH
Q 002026 731 SRWSKVKDILRDDPRYKSVRHE-DREVIFNEYVR 763 (978)
Q Consensus 731 T~Wsdvk~~L~~DpRy~aL~~~-dRe~lFeeyI~ 763 (978)
|+|.+|+..|.+|+||++|+.. +|+.||++||+
T Consensus 157 t~W~~~~~~l~~D~ry~~v~~~~~R~~~F~eyi~ 190 (190)
T 3hfh_A 157 SRWSXVXDXVESDPRYXAVDSSSMREDLFXQYIE 190 (190)
T ss_dssp CCHHHHHHHHSSSHHHHTSCCHHHHHHHHHHHHC
T ss_pred CCHHHHHHHHhhChHhhcCCCHHHHHHHHHHHhC
Confidence 9999999999999999999984 99999999983
No 2
>3hfh_A Transcription elongation regulator 1; helix bundle, activator, alternative splicing, coiled coil, nucleus, phosphoprotein, repressor; HET: MLY; 2.70A {Homo sapiens} PDB: 2kis_A 2e71_A 2kiq_A
Probab=99.92 E-value=1.5e-25 Score=231.32 Aligned_cols=184 Identities=24% Similarity=0.380 Sum_probs=137.2
Q ss_pred HHHHHHHHHHHhhhcCCCCCccHHHHHHHhcCCchhccCCHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHhhh
Q 002026 644 AAIEGFKQLLEEVSEDIDHSTDYQTFKKKWGSDPRFEALDRKDRELLLNERVLPLKRAAEEKAQAIRAAAASSFKSMLRE 723 (978)
Q Consensus 644 ~Ake~F~~LLee~~~~I~~~T~W~e~~kk~~~DpRfkaLd~~ERE~LF~EyI~~LKk~eeEk~r~~Rk~a~~~Fk~LL~e 723 (978)
.++.+|+.||.+. +|++.++|..+.++|.+||||.+|+..+|+++|++|+....+++.++++...+.++++|++||.+
T Consensus 6 e~~~~F~~lL~~~--~V~~~~~We~~~~~i~~Dpry~al~~~eRk~~f~~y~~~r~~ee~~ek~~~~~~ar~~F~~lL~e 83 (190)
T 3hfh_A 6 ARMXQFXDMLLER--GVSAFSTWEXELHXIVFDPRYLLLNPXERXQVFDQYVXTRAEEERREXXNXIMQAXEDFXXMMEE 83 (190)
T ss_dssp HHHHHHHHHHHHT--TCCSSSCHHHHGGGTTTSGGGGGSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTT----
T ss_pred HHHHHHHHHHHHc--CcCCCCchhhhhhhhccCcchhcCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4678999999986 59999999999999999999999988999999999999987776666666667899999999998
Q ss_pred cCCCCCCCChHHHHHHhccCchhhcCCc-ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 002026 724 KGDITLSSRWSKVKDILRDDPRYKSVRH-EDREVIFNEYVRELKAAEEEAEREAKARREEQEKLKEREREMRKRKEREEQ 802 (978)
Q Consensus 724 ~~~It~~T~Wsdvk~~L~~DpRy~aL~~-~dRe~lFeeyI~eLe~~e~e~ere~k~kreee~kLrERErevrkrKeReek 802 (978)
. .|++.++|.++...|.+||||.+|.. .+|+.||++||..|.+.+.+..
T Consensus 84 ~-~i~~~~~w~~~~~~~~~Dpr~~~~~~~~eR~~lF~eyi~~lkk~e~e~~----------------------------- 133 (190)
T 3hfh_A 84 A-XFNPRATFSEFAAXHAXDSRFXAIEXMXDREALFNEFVAAARXXEXEDS----------------------------- 133 (190)
T ss_dssp ------------------TCCTTTTSCTTTTTTTTHHHHHHHHSTTTTTHH-----------------------------
T ss_pred c-CCCCCCCHHHHHHHhCCCchhhcCccchHHHHHHHHHHHHHHHHHHHHH-----------------------------
Confidence 7 69999999999999999999999987 8999999999999965432100
Q ss_pred HHHHHHHHHhhHHHHHHHHHHHHHhhcCCCCChhHHHhhhhcCcccccccCCCChHHHHHHHHHHHH
Q 002026 803 EMERVRLKVRRKEAVTSFQALLVETIKDPQASWTESRPKLEKDPQGRATNADLDSSDREKLFREHIK 869 (978)
Q Consensus 803 e~eR~R~k~rr~Ear~~F~aLL~E~v~~p~ssW~Eik~~L~kDpr~ra~~~~Ls~~dre~LF~dhI~ 869 (978)
+.++..++..|.+||.++.+++.++|.+++..|.+|++|.++. ...+|+.||++||+
T Consensus 134 -------~~~r~~~~~~f~~lL~~~~l~~~t~W~~~~~~l~~D~ry~~v~---~~~~R~~~F~eyi~ 190 (190)
T 3hfh_A 134 -------XTRGEXIXSDFFELLSNHHLDSQSRWSXVXDXVESDPRYXAVD---SSSMREDLFXQYIE 190 (190)
T ss_dssp -------HHTHHHHHHHHHHHHHTSCCCTTCCHHHHHHHHSSSHHHHTSC---CHHHHHHHHHHHHC
T ss_pred -------HHHHHhHHHHHHHHHHhCCCCCCCCHHHHHHHHhhChHhhcCC---CHHHHHHHHHHHhC
Confidence 0112235668999999996689999999999999999998753 22489999999984
No 3
>2l5f_A PRE-mRNA-processing factor 40 homolog A; 2WW, HYPA, FBP11, protein binding; NMR {Homo sapiens}
Probab=99.77 E-value=9.8e-20 Score=167.13 Aligned_cols=81 Identities=38% Similarity=0.724 Sum_probs=69.2
Q ss_pred cCCCCCceEEEcCCCCeeeecCCCCceeccCCCCCCCCCCCCCCCCCCcccccCCCCCcEEEEcCCCceEEEeCCCCeee
Q 002026 353 NEQLDAWTAHKTDTGIVYYYNAVTGESTYEKPAGFKGEPDKVPVQPTPISMEHLTGTDWALVTTNDGKKYYYNSKMKVSS 432 (978)
Q Consensus 353 ~~~~~~W~e~~~~dGr~YYyN~~T~~StWekP~~l~~~~e~~~~qp~P~~~~~l~~~~W~e~~t~dGr~YyyN~~T~~S~ 432 (978)
..++.+|++|++++||+||||+.|++|+|++|.++....+ .. +..++|+++++.+||+||||..|++|+
T Consensus 10 ~~lp~~W~e~~~~~Gr~YYyN~~T~~s~We~P~~~~~~~e----------~~-~~~~~W~~~~~~~Gr~Yy~N~~T~~s~ 78 (92)
T 2l5f_A 10 SGAKSMWTEHKSPDGRTYYYNTETKQSTWEKPDDLKTPAE----------QL-LSKCPWKEYKSDSGKTYYYNSQTKESR 78 (92)
T ss_dssp TBTTTTEEEEECTTSCEEEEETTTTEEESSCSGGGTCHHH----------HH-HHSCSEEEEECTTCCEEEEETTTTEEE
T ss_pred CCCCCCcEEEEcCCCCEEEEECCCCceecccCcccccccc----------cc-ccccceEEEECCCCCEEEEECCCCCee
Confidence 3577899999999999999999999999999998763211 11 234899999999999999999999999
Q ss_pred ccCChhHHHhhh
Q 002026 433 WQIPSEVTELKK 444 (978)
Q Consensus 433 We~P~el~~l~~ 444 (978)
|++|++|+++++
T Consensus 79 We~P~~~~~~~~ 90 (92)
T 2l5f_A 79 WAKPKELEDLEG 90 (92)
T ss_dssp SCCCHHHHTSSS
T ss_pred ccCchhHhhhhc
Confidence 999999987653
No 4
>2jxw_A WW domain-binding protein 4; WW domain containing protein, FBP21, WBP4, metal- binding, mRNA processing, mRNA splicing, nucleus, polymorphism; NMR {Homo sapiens}
Probab=99.75 E-value=8.6e-19 Score=154.97 Aligned_cols=71 Identities=37% Similarity=0.781 Sum_probs=62.2
Q ss_pred CCceEEEcCCCCeeeecCCCCceeccCCCCCCCCCCCCCCCCCCcccccCCCCCcEEEEcCCCceEEEeCCCCeeeccCC
Q 002026 357 DAWTAHKTDTGIVYYYNAVTGESTYEKPAGFKGEPDKVPVQPTPISMEHLTGTDWALVTTNDGKKYYYNSKMKVSSWQIP 436 (978)
Q Consensus 357 ~~W~e~~~~dGr~YYyN~~T~~StWekP~~l~~~~e~~~~qp~P~~~~~l~~~~W~e~~t~dGr~YyyN~~T~~S~We~P 436 (978)
.+|+++++++|++||||+.|++|+|++|.+++...+. .....+|+++.+.+||+||||..|++|+|++|
T Consensus 5 ~~W~e~~~~~G~~YYyN~~T~~s~We~P~~~~~~~e~-----------~~~~~~W~~~~~~~Gr~YyyN~~T~~s~We~P 73 (75)
T 2jxw_A 5 GRWVEGITSEGYHYYYDLISGASQWEKPEGFQGDLKK-----------TAVKTVWVEGLSEDGFTYYYNTETGESRWEKP 73 (75)
T ss_dssp CCEEEEEETTTEEEEEETTTTEEECSCCSSCSSCCSS-----------SSCCCSEEEEEETTTEEEEEETTTTEEESSCC
T ss_pred CCcEEEECCCCCEEEEECCCCCEeecCCCcccccccc-----------cCCCccEEEEECCCCCEEEEECcCCCEeccCc
Confidence 5799999999999999999999999999988754322 12347899999999999999999999999999
Q ss_pred hh
Q 002026 437 SE 438 (978)
Q Consensus 437 ~e 438 (978)
++
T Consensus 74 ~e 75 (75)
T 2jxw_A 74 DD 75 (75)
T ss_dssp CC
T ss_pred CC
Confidence 75
No 5
>2dod_A Transcription elongation regulator 1; FF domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: a.159.2.1
Probab=99.73 E-value=1e-18 Score=156.47 Aligned_cols=71 Identities=49% Similarity=0.802 Sum_probs=66.4
Q ss_pred CCCCCCCHHHHHHHHHHHHHhcCCCCCCchHhhhcccccCchhhcccChHHHHHHHHHHHHHHHHHHHHHHH
Q 002026 568 DGETGPTKEECIIKFKEMLKERGVAPFSKWEKELPKIVFDPRFKAIQSQSARRALFERYVKTRAEEERKEKR 639 (978)
Q Consensus 568 eee~~~skEEak~aFkeLLkE~~V~~~stWekal~kI~~DPRY~aL~s~~ERKqlFeeYi~er~keEreEkr 639 (978)
.+..+.++||++++|++||++++|+++|+|+++|++|++||||.+|. +.+||++|++||.+++++|++++|
T Consensus 9 ~e~~~~t~eea~~~Fk~LL~e~~V~p~~tWe~~~~~i~~DpRY~aL~-~~eRK~~F~~y~~~r~~eereekr 79 (82)
T 2dod_A 9 RERAIVPLEARMKQFKDMLLERGVSAFSTWEKELHKIVFDPRYLLLN-PKERKQVFDQYVKTRAEEERRSGP 79 (82)
T ss_dssp SSSSSCCHHHHHHHHHHHHHHTTCCSSSCHHHHHHHHHTCSGGGTSC-HHHHHHHHHHHHHHHHHGGGSSCS
T ss_pred HhcccCCHHHHHHHHHHHHHHcCcCCCCCHHHHHHHHccCCccccCC-HHHHHHHHHHHHHHHHHHHHHHHH
Confidence 45667899999999999999999999999999999999999999997 999999999999999999887754
No 6
>1uzc_A Hypothetical protein FLJ21157; nuclear protein, structure, transcription, phosphopeptide recognition, RNA polymerase II carboxyl- terminal domain; NMR {Homo sapiens} SCOP: a.159.2.1 PDB: 2kzg_A 2lks_A 2l9v_A
Probab=99.68 E-value=2.1e-17 Score=144.25 Aligned_cols=63 Identities=35% Similarity=0.538 Sum_probs=59.9
Q ss_pred CCCCCCHHHHHHHHHHHHHhcCCCCCCchHhhhcccccCchhhcccChHHHHHHHHHHHHHHH
Q 002026 569 GETGPTKEECIIKFKEMLKERGVAPFSKWEKELPKIVFDPRFKAIQSQSARRALFERYVKTRA 631 (978)
Q Consensus 569 ee~~~skEEak~aFkeLLkE~~V~~~stWekal~kI~~DPRY~aL~s~~ERKqlFeeYi~er~ 631 (978)
..++.++|||+++|++||++++|+++|+|++++++|++||||++|.++++||++|++||.+|+
T Consensus 8 ~~~~~t~eea~~~F~~LL~e~~V~~~~tWe~~~~~i~~DpRY~al~~~~eRk~~F~ey~~~r~ 70 (71)
T 1uzc_A 8 TYTWNTKEEAKQAFKELLKEKRVPSNASWEQAMKMIINDPRYSALAKLSEKKQAFNAYKVQTE 70 (71)
T ss_dssp CCCCCSHHHHHHHHHHHHHHTTCCTTCCHHHHHHHHHTSGGGGGCSSHHHHHHHHHHHHHHSC
T ss_pred CCCCCCHHHHHHHHHHHHHHcCcCCCCCHHHHHHHHccCccccccCCHHHHHHHHHHHHHHhc
Confidence 456889999999999999999999999999999999999999999999999999999998764
No 7
>2kxq_A E3 ubiquitin-protein ligase smurf2; WW, smurf2, TGF-beta, modular binding, protein BIN; NMR {Homo sapiens} PDB: 2lb0_A* 2laz_A*
Probab=99.64 E-value=3.8e-16 Score=142.75 Aligned_cols=80 Identities=19% Similarity=0.392 Sum_probs=65.5
Q ss_pred cCCCCCceEEEcCCCCeeeecCCCCceeccCCCCCCCCCCCCCCCCCCcccccCCCCCcEEEEcCCCceEEEeCCCCeee
Q 002026 353 NEQLDAWTAHKTDTGIVYYYNAVTGESTYEKPAGFKGEPDKVPVQPTPISMEHLTGTDWALVTTNDGKKYYYNSKMKVSS 432 (978)
Q Consensus 353 ~~~~~~W~e~~~~dGr~YYyN~~T~~StWekP~~l~~~~e~~~~qp~P~~~~~l~~~~W~e~~t~dGr~YyyN~~T~~S~ 432 (978)
..++.+|+++++++||+||||+.|++|+|++|........ ..+.....|+ .+|+++.+.+|++||||..|++|+
T Consensus 8 ~~LP~gWe~~~~~~Gr~YY~n~~t~~t~W~~P~~~~~~~~-----~~~~~~~~LP-~gWe~~~~~~G~~Yy~n~~t~~t~ 81 (90)
T 2kxq_A 8 PDLPEGYEQRTTQQGQVYFLHTQTGVSTWHDPRVPRDLSN-----INCEELGPLP-PGWEIRNTATGRVYFVDHNNRTTQ 81 (90)
T ss_dssp CSCCSSCEEEEETTTEEEEEETTTTEEESSCSSSCSSSCS-----CCGGGTCCCC-SSCCEEECTTSCEEEEETTTTEEE
T ss_pred CCCCCCcEEEECCCCCEEEEECCCCeEeeecccccccccc-----cCcccccccC-CCceEEECCCCCEEEEECCCCcEe
Confidence 4688999999999999999999999999999987643110 0111223455 789999999999999999999999
Q ss_pred ccCChh
Q 002026 433 WQIPSE 438 (978)
Q Consensus 433 We~P~e 438 (978)
|++|..
T Consensus 82 w~~Pr~ 87 (90)
T 2kxq_A 82 FTDPRL 87 (90)
T ss_dssp SSCTTT
T ss_pred cCCCCc
Confidence 999974
No 8
>1o6w_A PRP40, PRE-mRNA processing protein PRP40; WW domain PAIR, nuclear protein, mRNA splicing, ribonucleoprotein; NMR {Saccharomyces cerevisiae} SCOP: b.72.1.1 b.72.1.1
Probab=99.62 E-value=4.3e-17 Score=143.88 Aligned_cols=71 Identities=37% Similarity=0.761 Sum_probs=59.8
Q ss_pred CCceEEEcCCCCeeeecCCCCceeccCCCCCCCCCCCCCCCCCCcccccCCCCCcEEEEcCCCceEEEeCCCCeeeccCC
Q 002026 357 DAWTAHKTDTGIVYYYNAVTGESTYEKPAGFKGEPDKVPVQPTPISMEHLTGTDWALVTTNDGKKYYYNSKMKVSSWQIP 436 (978)
Q Consensus 357 ~~W~e~~~~dGr~YYyN~~T~~StWekP~~l~~~~e~~~~qp~P~~~~~l~~~~W~e~~t~dGr~YyyN~~T~~S~We~P 436 (978)
++|+++++++|++||||+.|++|+|++|.++....+ ...++ .+|+++.+.+|++||||..|++|+|++|
T Consensus 2 ~~W~~~~~~~Gr~YY~n~~T~~s~W~~P~~~~~~~~----------~~~lp-~gW~~~~~~~Gr~Yy~n~~t~~t~W~~P 70 (75)
T 1o6w_A 2 SIWKEAKDASGRIYYYNTLTKKSTWEKPKELISQEE----------LLLRE-NGWKAAKTADGKVYYYNPTTRETSWTIP 70 (75)
T ss_dssp CCEEEEECTTCCEEEEETTTTEEESSCCHHHHHHHH----------HHHHH-HTCEEEECTTCCEEEEETTTTEEESSCC
T ss_pred CCCeEEECCCCCeEEEECCCCCEEeecchhhccccc----------ccCCC-CeEEEEECCCCCEEEEECCCCCEECCCC
Confidence 579999999999999999999999999986542110 11223 6899999999999999999999999999
Q ss_pred hh
Q 002026 437 SE 438 (978)
Q Consensus 437 ~e 438 (978)
+.
T Consensus 71 ~~ 72 (75)
T 1o6w_A 71 AF 72 (75)
T ss_dssp CC
T ss_pred CC
Confidence 74
No 9
>1tk7_A CG4244-PB; WW domain, notch, signaling protein; NMR {Drosophila melanogaster} SCOP: b.72.1.1 b.72.1.1
Probab=99.61 E-value=7.2e-16 Score=140.30 Aligned_cols=79 Identities=18% Similarity=0.408 Sum_probs=65.3
Q ss_pred cccCCCCCceEEEcCCCCeeeecCCCCceeccCCCCCCCCCCCCCCCCCCcccccCCCCCcEEEEcCCCceEEEeCCCCe
Q 002026 351 SVNEQLDAWTAHKTDTGIVYYYNAVTGESTYEKPAGFKGEPDKVPVQPTPISMEHLTGTDWALVTTNDGKKYYYNSKMKV 430 (978)
Q Consensus 351 a~~~~~~~W~e~~~~dGr~YYyN~~T~~StWekP~~l~~~~e~~~~qp~P~~~~~l~~~~W~e~~t~dGr~YyyN~~T~~ 430 (978)
....++.+|+++++++||+||||+.|++|+|++|........ ......|+ .+|+++.+.+|++||||..|++
T Consensus 9 ~~~~LP~gWe~~~~~~Gr~Yy~n~~t~~t~W~~P~~~~~~~~-------~~~~~~LP-~gWe~~~~~~G~~Yy~nh~t~~ 80 (88)
T 1tk7_A 9 ALGPLPDGWEKKIQSDNRVYFVNHKNRTTQWEDPRTQGQEVS-------LINEGPLP-PGWEIRYTAAGERFFVDHNTRR 80 (88)
T ss_dssp TTSSSSSSCCEEEETTTEEEEEETTTTEEEEESCCCTTTCCH-------HHHSCSSC-SSCEEEEETTTEEEEEETTTTE
T ss_pred ccCCCCCCcEEEECCCCCEEEEECCCCCeEeecccccccccc-------cccccccC-CceEEEECCCCCEEEEECCCCc
Confidence 455789999999999999999999999999999987643210 01122455 7899999999999999999999
Q ss_pred eeccCCh
Q 002026 431 SSWQIPS 437 (978)
Q Consensus 431 S~We~P~ 437 (978)
|+|++|+
T Consensus 81 ttw~~Pr 87 (88)
T 1tk7_A 81 TTFEDPR 87 (88)
T ss_dssp EESSSSC
T ss_pred EeCCCCC
Confidence 9999995
No 10
>2b7e_A PRE-mRNA processing protein PRP40; structural protein; NMR {Saccharomyces cerevisiae} SCOP: a.159.2.1
Probab=99.59 E-value=3.8e-16 Score=130.49 Aligned_cols=55 Identities=24% Similarity=0.434 Sum_probs=52.6
Q ss_pred HHHHHHHHHHHHHhcCCCCCCchHhhhccc-ccCchhhcccC-hHHHHHHHHHHHHH
Q 002026 575 KEECIIKFKEMLKERGVAPFSKWEKELPKI-VFDPRFKAIQS-QSARRALFERYVKT 629 (978)
Q Consensus 575 kEEak~aFkeLLkE~~V~~~stWekal~kI-~~DPRY~aL~s-~~ERKqlFeeYi~e 629 (978)
+|||+++|++||++++|++.|+|+++|+.| ++||||++|++ ..+||++|++|+.+
T Consensus 2 ~eEae~aF~~lL~~~~V~s~wsweqamr~i~i~DPrY~al~d~~~eRK~~Fe~Y~~~ 58 (59)
T 2b7e_A 2 AMEAEKEFITMLKENQVDSTWSFSRIISELGTRDPRYWMVDDDPLWKKEMFEKYLSN 58 (59)
T ss_dssp TTHHHHHHHHHHHHTTCCSSCCHHHHHHHHHHHCTHHHHSCCCHHHHHHHHHHHHHT
T ss_pred hhHHHHHHHHHHHHcCCCCCCcHHHHHHHhccCCCccccccCCHHHHHHHHHHHHhc
Confidence 579999999999999999999999999999 89999999995 99999999999975
No 11
>2dof_A Transcription elongation regulator 1; FF domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: a.159.2.1
Probab=99.57 E-value=2.4e-16 Score=139.91 Aligned_cols=76 Identities=32% Similarity=0.574 Sum_probs=69.4
Q ss_pred HHHHHHHhhHHHHHHHHHHHHHhhcCCCCChhHHHhhhhcCcccccccCCCChHHHHHHHHHHHHHHHHHHHHHHHH
Q 002026 805 ERVRLKVRRKEAVTSFQALLVETIKDPQASWTESRPKLEKDPQGRATNADLDSSDREKLFREHIKTLYERCAHDFRG 881 (978)
Q Consensus 805 eR~R~k~rr~Ear~~F~aLL~E~v~~p~ssW~Eik~~L~kDpr~ra~~~~Ls~~dre~LF~dhI~~L~ek~r~dFr~ 881 (978)
+++|+++++.||+.+|++||+|+|++++.+|+|++++|++|+||. .++.|+.+++++||++||+.|++||+++|++
T Consensus 8 dkere~h~r~EA~~~F~aLL~DlIr~pd~sW~Eakr~LrKD~R~~-~~~~Ld~~ekE~LF~eHi~~L~~K~r~~f~~ 83 (85)
T 2dof_A 8 DREREQHKREEAIQNFKALLSDMVRSSDVSWSDTRRTLRKDHRWE-SGSLLEREEKEKLFNEHIEALTKKKRESGPS 83 (85)
T ss_dssp SSSCHHHHHHHHHHHHHHHHHHHTCCSSCCHHHHHHHHHHSSTHH-HHTTSCHHHHHHHHHHHHHHHHHHCSSCCCC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCCCCCHHHHHHHhccCcccc-cCCcCCHHHHHHHHHHHHHHHHHHHHHHhhh
Confidence 445678889999999999999999999999999999999999987 4567999999999999999999999998863
No 12
>2juc_A PRE-mRNA-splicing factor URN1; FF, helical bundle, solution, mRNA processing, nucleus, spliceosome, unknown function; NMR {Saccharomyces cerevisiae}
Probab=99.37 E-value=1.7e-13 Score=114.55 Aligned_cols=53 Identities=28% Similarity=0.458 Sum_probs=50.9
Q ss_pred HHHHHHHHHHHHhcCCCCCCchHhhhcccccCchhhcccChHHHHHHHHHHHH
Q 002026 576 EECIIKFKEMLKERGVAPFSKWEKELPKIVFDPRFKAIQSQSARRALFERYVK 628 (978)
Q Consensus 576 EEak~aFkeLLkE~~V~~~stWekal~kI~~DPRY~aL~s~~ERKqlFeeYi~ 628 (978)
++++..|++||.+++|++|++|+.+.++|++||||.+|.+++.|+.+|++||+
T Consensus 6 ~d~k~~F~~LL~e~~InPys~W~~e~~ki~~DpRY~~l~s~~~R~e~F~ew~r 58 (59)
T 2juc_A 6 IDERNIFFELFDRYKLDKFSTWSLQSKKIENDPDFYKIRDDTVRESLFEEWCG 58 (59)
T ss_dssp CSSHHHHHHHHHHTTCCTTTCSHHHHHHHSSSTTGGGSSCHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHcCCCCCCchhhhcccccCCCCeeecCChHHHHHHHHHHhh
Confidence 45789999999999999999999999999999999999999999999999996
No 13
>2doe_A Transcription elongation regulator 1; FF domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: a.159.2.1
Probab=99.35 E-value=6.8e-13 Score=119.42 Aligned_cols=68 Identities=31% Similarity=0.511 Sum_probs=62.4
Q ss_pred CCCCCCCCHHHHHHHHHHHHHhcCCCCCCchHhhhcccccCchhhcccChHHHHHHHHHHHHHHHHHH
Q 002026 567 EDGETGPTKEECIIKFKEMLKERGVAPFSKWEKELPKIVFDPRFKAIQSQSARRALFERYVKTRAEEE 634 (978)
Q Consensus 567 eeee~~~skEEak~aFkeLLkE~~V~~~stWekal~kI~~DPRY~aL~s~~ERKqlFeeYi~er~keE 634 (978)
+.++....++.++++|+.||++++|+++++|++++++|.+||||.+|.+..+|++||++||.++.+++
T Consensus 8 EkEek~~r~~k~~~~F~~mL~e~~I~~~s~W~~~~~~i~~Dpry~av~~~~eRe~lF~eYi~~l~~~e 75 (83)
T 2doe_A 8 EKEDSKTRGEKIKSDFFELLSNHHLDSQSRWSKVKDKVESDPRYKAVDSSSMREDLFKQYIEKIAKNL 75 (83)
T ss_dssp CCCCSSCCHHHHHHHHHHHHHHTTCCTTCCHHHHHHHHTTSTHHHHCCCHHHHHHHHHHHHHHHHSCC
T ss_pred HHHHHHHHHHHHHHHHHHHHhhCCCCCCCcHHHHHHHHccCHHHHhcCCHHHHHHHHHHHHHHHHHHH
Confidence 34566678999999999999999999999999999999999999999999999999999999887654
No 14
>2dk7_A Transcription elongation regulator 1; structural genomics, WW domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.16 E-value=1.1e-11 Score=107.44 Aligned_cols=44 Identities=27% Similarity=0.734 Sum_probs=41.0
Q ss_pred CCCcccccCCCCCcEEEEcCCCceEEEeCCCCeeeccCChhHHH
Q 002026 398 PTPISMEHLTGTDWALVTTNDGKKYYYNSKMKVSSWQIPSEVTE 441 (978)
Q Consensus 398 p~P~~~~~l~~~~W~e~~t~dGr~YyyN~~T~~S~We~P~el~~ 441 (978)
..|++..++++++|++|+|.|||+||||+.|++|+|++|++|+.
T Consensus 9 ~~p~s~~pipgt~W~~v~T~dGR~fyyN~~Tk~S~WekP~eLk~ 52 (73)
T 2dk7_A 9 AKPVATAPIPGTPWCVVWTGDERVFFYNPTTRLSMWDRPDDLIG 52 (73)
T ss_dssp CCEEEEEECSSSSCEEEEESSSCEEEEETTTTEECSSCCTTTTT
T ss_pred CCCCCCCCCCCCCcEEEECCCCCEEEecCcccceeccCChHhcC
Confidence 56788888999999999999999999999999999999999874
No 15
>1e0l_A Formin binding protein; SH3 domain, WW domain, FBP28, signal transduction; NMR {Mus musculus} SCOP: b.72.1.1 PDB: 2jup_W 2rly_W 2rm0_W 2nnt_A
Probab=99.02 E-value=1.7e-10 Score=88.43 Aligned_cols=33 Identities=52% Similarity=0.815 Sum_probs=30.7
Q ss_pred CCCceEEEcCCCCeeeecCCCCceeccCCCCCC
Q 002026 356 LDAWTAHKTDTGIVYYYNAVTGESTYEKPAGFK 388 (978)
Q Consensus 356 ~~~W~e~~~~dGr~YYyN~~T~~StWekP~~l~ 388 (978)
...|++|++++|++||||..|++|+||+|.+|+
T Consensus 5 ~~~W~e~~~~~G~~YYyN~~T~es~We~P~~~k 37 (37)
T 1e0l_A 5 VSEWTEYKTADGKTYYYNNRTLESTWEKPQELK 37 (37)
T ss_dssp SCSCEEEECTTSCEEEEETTTTEEESSCCSSCC
T ss_pred CCCeEEEECCCCCEEEEECCCCCEEecCCCccC
Confidence 457999999999999999999999999999875
No 16
>2ysi_A Transcription elongation regulator 1; Ca150, FBP28, WW domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: k.22.1.1
Probab=99.01 E-value=2.3e-10 Score=89.14 Aligned_cols=37 Identities=43% Similarity=0.753 Sum_probs=32.9
Q ss_pred cccCCCCCceEEEcCCCCeeeecCCCCceeccCCCCC
Q 002026 351 SVNEQLDAWTAHKTDTGIVYYYNAVTGESTYEKPAGF 387 (978)
Q Consensus 351 a~~~~~~~W~e~~~~dGr~YYyN~~T~~StWekP~~l 387 (978)
++...+..|.+|++++|++||||..|++|+||+|.++
T Consensus 4 ~~~~~~~~W~e~~~~~G~~YYyN~~T~eS~We~P~~~ 40 (40)
T 2ysi_A 4 GSSGTEEIWVENKTPDGKVYYYNARTRESAWTKPDGV 40 (40)
T ss_dssp CCCCCCCSEEEEECTTSCEEEEETTTCCEESSCCSCC
T ss_pred ccCCCCCCCEEEECCCCCEEEEECCCCCEEeCCCCCC
Confidence 3446677899999999999999999999999999874
No 17
>2doe_A Transcription elongation regulator 1; FF domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: a.159.2.1
Probab=98.87 E-value=3.3e-10 Score=101.93 Aligned_cols=58 Identities=36% Similarity=0.639 Sum_probs=53.0
Q ss_pred HHHHHHHHHHHhhhcCCCCCCCChHHHHHHhccCchhhcCCc-ccHHHHHHHHHHHHHHH
Q 002026 710 RAAAASSFKSMLREKGDITLSSRWSKVKDILRDDPRYKSVRH-EDREVIFNEYVRELKAA 768 (978)
Q Consensus 710 Rk~a~~~Fk~LL~e~~~It~~T~Wsdvk~~L~~DpRy~aL~~-~dRe~lFeeyI~eLe~~ 768 (978)
..+++++|+.||++.+ |+++|+|.+|+.+|.+||||.+|.. .+|+.||++||.+|.++
T Consensus 16 ~~k~~~~F~~mL~e~~-I~~~s~W~~~~~~i~~Dpry~av~~~~eRe~lF~eYi~~l~~~ 74 (83)
T 2doe_A 16 GEKIKSDFFELLSNHH-LDSQSRWSKVKDKVESDPRYKAVDSSSMREDLFKQYIEKIAKN 74 (83)
T ss_dssp HHHHHHHHHHHHHHTT-CCTTCCHHHHHHHHTTSTHHHHCCCHHHHHHHHHHHHHHHHSC
T ss_pred HHHHHHHHHHHHhhCC-CCCCCcHHHHHHHHccCHHHHhcCCHHHHHHHHHHHHHHHHHH
Confidence 3467899999999996 9999999999999999999999986 89999999999999653
No 18
>1ywi_A Formin-binding protein 3; WW domain, class II, proline-rich peptides, protein-protein interactions, structural protein; NMR {Homo sapiens} SCOP: b.72.1.1 PDB: 1ywj_A 1zr7_A 2dyf_A
Probab=98.86 E-value=7.8e-10 Score=86.60 Aligned_cols=36 Identities=47% Similarity=0.802 Sum_probs=27.5
Q ss_pred cccCCCCCceEEEcCCCCeeeecCCCCceeccCCCC
Q 002026 351 SVNEQLDAWTAHKTDTGIVYYYNAVTGESTYEKPAG 386 (978)
Q Consensus 351 a~~~~~~~W~e~~~~dGr~YYyN~~T~~StWekP~~ 386 (978)
+....+.+|++|++++|+.||||..|++|+||+|.+
T Consensus 6 ~~~~~~~~W~e~~~~~G~~YYyN~~T~eS~We~P~e 41 (41)
T 1ywi_A 6 SVGSAKSMWTEHKSPDGRTYYYNTETKQSTWEKPDD 41 (41)
T ss_dssp ------CCEEEEEETTTEEEEEETTTTEEEESCC--
T ss_pred cCCCCCCCcEEEECCCCCEEEEECCCCCEEeCCCCC
Confidence 444567789999999999999999999999999964
No 19
>2dk7_A Transcription elongation regulator 1; structural genomics, WW domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.85 E-value=2.8e-10 Score=98.62 Aligned_cols=34 Identities=26% Similarity=0.568 Sum_probs=32.2
Q ss_pred CceEEEcCCCCeeeecCCCCceeccCCCCCCCCC
Q 002026 358 AWTAHKTDTGIVYYYNAVTGESTYEKPAGFKGEP 391 (978)
Q Consensus 358 ~W~e~~~~dGr~YYyN~~T~~StWekP~~l~~~~ 391 (978)
.|.+|++.|||+||||..|++|+|++|++|++..
T Consensus 21 ~W~~v~T~dGR~fyyN~~Tk~S~WekP~eLk~~~ 54 (73)
T 2dk7_A 21 PWCVVWTGDERVFFYNPTTRLSMWDRPDDLIGRA 54 (73)
T ss_dssp SCEEEEESSSCEEEEETTTTEECSSCCTTTTTCS
T ss_pred CcEEEECCCCCEEEecCcccceeccCChHhcCHH
Confidence 6999999999999999999999999999999654
No 20
>2cqn_A Formin-binding protein 3; FF domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: a.159.2.1
Probab=98.84 E-value=4.8e-09 Score=93.01 Aligned_cols=59 Identities=24% Similarity=0.417 Sum_probs=54.0
Q ss_pred CHHHHHHHHHHHHHhcC--CCCCCchHhhhcccccCchhhcccChHHHHHHHHHHHHHHHH
Q 002026 574 TKEECIIKFKEMLKERG--VAPFSKWEKELPKIVFDPRFKAIQSQSARRALFERYVKTRAE 632 (978)
Q Consensus 574 skEEak~aFkeLLkE~~--V~~~stWekal~kI~~DPRY~aL~s~~ERKqlFeeYi~er~k 632 (978)
-...++.+|+.||++.+ |..+++|+++.++|.+||+|++|.+..+|+++|++||..+.+
T Consensus 7 r~rrl~~~F~~mLk~~~p~I~~~s~We~vr~~~e~~~~fkav~~E~eR~~lFeeYi~~Lke 67 (77)
T 2cqn_A 7 GMKRKESAFKSMLKQAAPPIELDAVWEDIRERFVKEPAFEDITLESERKRIFKDFMHVLEH 67 (77)
T ss_dssp SHHHHHHHHHHHHHTCSSCCCTTCCHHHHHHHHTTSHHHHTCCCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHccCHHHHhcCCHHHHHHHHHHHHHHHHH
Confidence 44567889999999996 999999999999999999999999999999999999987654
No 21
>1e0l_A Formin binding protein; SH3 domain, WW domain, FBP28, signal transduction; NMR {Mus musculus} SCOP: b.72.1.1 PDB: 2jup_W 2rly_W 2rm0_W 2nnt_A
Probab=98.80 E-value=2.4e-09 Score=82.00 Aligned_cols=34 Identities=38% Similarity=0.846 Sum_probs=31.1
Q ss_pred CCCCcEEEEcCCCceEEEeCCCCeeeccCChhHH
Q 002026 407 TGTDWALVTTNDGKKYYYNSKMKVSSWQIPSEVT 440 (978)
Q Consensus 407 ~~~~W~e~~t~dGr~YyyN~~T~~S~We~P~el~ 440 (978)
....|.++.+.+|++||||..|++|+|++|.+|+
T Consensus 4 ~~~~W~e~~~~~G~~YYyN~~T~es~We~P~~~k 37 (37)
T 1e0l_A 4 AVSEWTEYKTADGKTYYYNNRTLESTWEKPQELK 37 (37)
T ss_dssp SSCSCEEEECTTSCEEEEETTTTEEESSCCSSCC
T ss_pred CCCCeEEEECCCCCEEEEECCCCCEEecCCCccC
Confidence 4578999999999999999999999999999863
No 22
>2cqn_A Formin-binding protein 3; FF domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: a.159.2.1
Probab=98.73 E-value=1.6e-08 Score=89.68 Aligned_cols=57 Identities=25% Similarity=0.596 Sum_probs=52.3
Q ss_pred HHHHHHHHHHhhhc-CCCCCCCChHHHHHHhccCchhhcCCc-ccHHHHHHHHHHHHHH
Q 002026 711 AAAASSFKSMLREK-GDITLSSRWSKVKDILRDDPRYKSVRH-EDREVIFNEYVRELKA 767 (978)
Q Consensus 711 k~a~~~Fk~LL~e~-~~It~~T~Wsdvk~~L~~DpRy~aL~~-~dRe~lFeeyI~eLe~ 767 (978)
++++++|+.||++. +.|+.+++|++|+.+|.+|++|++|.. .+|+.||++||..|+.
T Consensus 9 rrl~~~F~~mLk~~~p~I~~~s~We~vr~~~e~~~~fkav~~E~eR~~lFeeYi~~Lke 67 (77)
T 2cqn_A 9 KRKESAFKSMLKQAAPPIELDAVWEDIRERFVKEPAFEDITLESERKRIFKDFMHVLEH 67 (77)
T ss_dssp HHHHHHHHHHHHTCSSCCCTTCCHHHHHHHHTTSHHHHTCCCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHccCHHHHhcCCHHHHHHHHHHHHHHHHH
Confidence 35789999999998 579999999999999999999999975 7999999999999965
No 23
>2dk1_A WW domain-binding protein 4; WBP-4, formin- binding protein 21, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.72.1.1
Probab=98.73 E-value=7e-09 Score=84.50 Aligned_cols=37 Identities=41% Similarity=0.892 Sum_probs=33.2
Q ss_pred CCceEEEcCCCCeeeecCCCCceeccCCCCCCCCCCC
Q 002026 357 DAWTAHKTDTGIVYYYNAVTGESTYEKPAGFKGEPDK 393 (978)
Q Consensus 357 ~~W~e~~~~dGr~YYyN~~T~~StWekP~~l~~~~e~ 393 (978)
..|.+|++++|+.||||..|++|+||+|.+++...++
T Consensus 7 ~~W~e~~s~~G~~YYyN~~T~eS~WekP~~~~~~~~~ 43 (50)
T 2dk1_A 7 GRWVEGITSEGYHYYYDLISGASQWEKPEGFQGDLKK 43 (50)
T ss_dssp CCEEECCCSTTCCCEEESSSCCEESSCCTTCCCCCST
T ss_pred CCeEEEECCCCCEEEEECCCCCEEeeCChhhhhhHHh
Confidence 3699999999999999999999999999999765543
No 24
>2ysh_A GAS-7, growth-arrest-specific protein 7; WW domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.22.1.1
Probab=98.72 E-value=1e-08 Score=79.73 Aligned_cols=34 Identities=29% Similarity=0.578 Sum_probs=31.6
Q ss_pred cCCCCCceEEEcCCCCeeeecCCCCceeccCCCC
Q 002026 353 NEQLDAWTAHKTDTGIVYYYNAVTGESTYEKPAG 386 (978)
Q Consensus 353 ~~~~~~W~e~~~~dGr~YYyN~~T~~StWekP~~ 386 (978)
..++.+|+++.+++|++||||+.|++|+|++|..
T Consensus 6 ~~LP~gW~~~~d~~Gr~YY~n~~T~~t~We~P~~ 39 (40)
T 2ysh_A 6 SGLPPGWQSYLSPQGRRYYVNTTTNETTWERPSS 39 (40)
T ss_dssp SSCCTTCEEEECTTSCEEEECSSSCCEESSSCCC
T ss_pred CCCCCCceEEECCCCCEEEEECCCCCEeCCCCCC
Confidence 4678899999999999999999999999999974
No 25
>1e0m_A Wwprototype; SH3 prototype, protein design, de novo protein; NMR {} SCOP: k.22.1.1
Probab=98.72 E-value=7.6e-09 Score=78.95 Aligned_cols=33 Identities=36% Similarity=0.570 Sum_probs=31.1
Q ss_pred CCCCCceEEEcCCCCeeeecCCCCceeccCCCC
Q 002026 354 EQLDAWTAHKTDTGIVYYYNAVTGESTYEKPAG 386 (978)
Q Consensus 354 ~~~~~W~e~~~~dGr~YYyN~~T~~StWekP~~ 386 (978)
.++.+|+++.+++|++||||+.|++|+|++|..
T Consensus 3 ~LP~gW~~~~~~~G~~Yy~n~~t~~t~W~~P~~ 35 (37)
T 1e0m_A 3 GLPPGWDEYKTHNGKTYYYNHNTKTSTWTDPRM 35 (37)
T ss_dssp CSCTTEEEEECSSCCEEEEETTTTEEESSCTTT
T ss_pred CCCCCcEEEECCCCCEEEEECCCCCeeeeCcCC
Confidence 678899999999999999999999999999975
No 26
>2dof_A Transcription elongation regulator 1; FF domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: a.159.2.1
Probab=98.71 E-value=1.1e-08 Score=91.13 Aligned_cols=68 Identities=26% Similarity=0.558 Sum_probs=60.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhhhhccCCccccCHHHHHHhcCCCcccC---CCChhHHHHHHHHHHHHHHHhhhcc
Q 002026 869 KTLYERCAHDFRGLLAEVITAEAAAQETEDGKTVLNSWSTAKRVLKPEPRYS---KMPRKEREALWRRHAEEIQRKHKSS 945 (978)
Q Consensus 869 ~~L~ek~r~dFr~LL~E~~~~~~~~~~~~d~~t~~~sW~e~kk~Lk~D~RY~---~l~~~eRe~lf~~~ie~l~~k~k~~ 945 (978)
....+.+...|++||.|.| .++..+|++++++|+.|+||. .|+.++++.||++||+.|.+|.++.
T Consensus 13 ~h~r~EA~~~F~aLL~DlI------------r~pd~sW~Eakr~LrKD~R~~~~~~Ld~~ekE~LF~eHi~~L~~K~r~~ 80 (85)
T 2dof_A 13 QHKREEAIQNFKALLSDMV------------RSSDVSWSDTRRTLRKDHRWESGSLLEREEKEKLFNEHIEALTKKKRES 80 (85)
T ss_dssp HHHHHHHHHHHHHHHHHHT------------CCSSCCHHHHHHHHHHSSTHHHHTTSCHHHHHHHHHHHHHHHHHHCSSC
T ss_pred HHHHHHHHHHHHHHHHHHh------------cCCCCCHHHHHHHhccCcccccCCcCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 3345778899999999986 457789999999999999998 5788999999999999999999999
Q ss_pred ccc
Q 002026 946 LDQ 948 (978)
Q Consensus 946 ~~~ 948 (978)
|++
T Consensus 81 f~~ 83 (85)
T 2dof_A 81 GPS 83 (85)
T ss_dssp CCC
T ss_pred hhh
Confidence 875
No 27
>1wr3_A Ubiquitin-protein ligase NEDD4-2; all-beta; NMR {Mus musculus}
Probab=98.70 E-value=9.6e-09 Score=78.01 Aligned_cols=33 Identities=18% Similarity=0.456 Sum_probs=30.9
Q ss_pred cCCCCCceEEEcCCCCeeeecCCCCceeccCCC
Q 002026 353 NEQLDAWTAHKTDTGIVYYYNAVTGESTYEKPA 385 (978)
Q Consensus 353 ~~~~~~W~e~~~~dGr~YYyN~~T~~StWekP~ 385 (978)
..++.+|+++.+++|++||||+.|++|+|++|.
T Consensus 3 ~~LP~GWe~~~d~~G~~Yy~n~~t~~t~We~P~ 35 (36)
T 1wr3_A 3 PPLPPGWEEKVDNLGRTYYVNHNNRSTQWHRPS 35 (36)
T ss_dssp SCSCTTEEEEECSSSCEEEEETTTCCEESSCSC
T ss_pred CCCCCCCEEEECCCCCEEEEECCCCCEeeeCcC
Confidence 468899999999999999999999999999995
No 28
>2kyk_A E3 ubiquitin-protein ligase itchy homolog; LMP2A, PY motif, WW domain; NMR {Homo sapiens}
Probab=98.70 E-value=1.2e-08 Score=79.01 Aligned_cols=35 Identities=20% Similarity=0.552 Sum_probs=32.2
Q ss_pred cccCCCCCceEEEcCCCCeeeecCCCCceeccCCC
Q 002026 351 SVNEQLDAWTAHKTDTGIVYYYNAVTGESTYEKPA 385 (978)
Q Consensus 351 a~~~~~~~W~e~~~~dGr~YYyN~~T~~StWekP~ 385 (978)
....++.+|+++.+++|++||||+.|++|+|++|.
T Consensus 3 ~~~~LP~gWe~~~d~~G~~YY~n~~t~~t~We~P~ 37 (39)
T 2kyk_A 3 AMGPLPPGWERRVDNMGRIYYVDHFTRTTTWQRPT 37 (39)
T ss_dssp SSCCCCSSCEEEECTTSCEEEECSSSCCEECCCCC
T ss_pred ccCCCCCCcEEEEcCCCCEEEEECCCCCEeccCCC
Confidence 34578999999999999999999999999999996
No 29
>1ymz_A CC45; artificial protein, computational design, unknown function; NMR {Synthetic} SCOP: k.22.1.1
Probab=98.65 E-value=1.6e-08 Score=79.78 Aligned_cols=35 Identities=29% Similarity=0.497 Sum_probs=32.2
Q ss_pred CCCCCceEEEcCCCCeeeecCCCCceeccCCCCCC
Q 002026 354 EQLDAWTAHKTDTGIVYYYNAVTGESTYEKPAGFK 388 (978)
Q Consensus 354 ~~~~~W~e~~~~dGr~YYyN~~T~~StWekP~~l~ 388 (978)
.++.+|+++.+++|++||||+.|++|+|++|..+.
T Consensus 8 ~LP~gW~~~~~~~Gr~YY~n~~T~~t~We~P~~~~ 42 (43)
T 1ymz_A 8 PLPPGWERRTDVEGKVYYFNVRTLTTTWERPTIIL 42 (43)
T ss_dssp CCCSSEEEEECTTSCEEEEETTTTEEESSCCCSCC
T ss_pred CCCCCCEEEECCCCCEEEEECCCCCCcccCCcccc
Confidence 57889999999999999999999999999998753
No 30
>2ysi_A Transcription elongation regulator 1; Ca150, FBP28, WW domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: k.22.1.1
Probab=98.64 E-value=1.4e-08 Score=78.98 Aligned_cols=31 Identities=42% Similarity=0.830 Sum_probs=29.3
Q ss_pred CCcEEEEcCCCceEEEeCCCCeeeccCChhH
Q 002026 409 TDWALVTTNDGKKYYYNSKMKVSSWQIPSEV 439 (978)
Q Consensus 409 ~~W~e~~t~dGr~YyyN~~T~~S~We~P~el 439 (978)
..|.++.+.+|++||||..|++|+|++|.+|
T Consensus 10 ~~W~e~~~~~G~~YYyN~~T~eS~We~P~~~ 40 (40)
T 2ysi_A 10 EIWVENKTPDGKVYYYNARTRESAWTKPDGV 40 (40)
T ss_dssp CSEEEEECTTSCEEEEETTTCCEESSCCSCC
T ss_pred CCCEEEECCCCCEEEEECCCCCEEeCCCCCC
Confidence 6899999999999999999999999999864
No 31
>1wr4_A Ubiquitin-protein ligase NEDD4-2; all-beta; NMR {Mus musculus} PDB: 2lb2_A*
Probab=98.62 E-value=2e-08 Score=76.13 Aligned_cols=33 Identities=24% Similarity=0.501 Sum_probs=30.7
Q ss_pred cCCCCCceEEEcCCCCeeeecCCCCceeccCCC
Q 002026 353 NEQLDAWTAHKTDTGIVYYYNAVTGESTYEKPA 385 (978)
Q Consensus 353 ~~~~~~W~e~~~~dGr~YYyN~~T~~StWekP~ 385 (978)
..++.+|+++.+++|++||||+.|++|+|++|.
T Consensus 3 ~~LP~gWe~~~d~~g~~Yy~n~~t~~t~W~~P~ 35 (36)
T 1wr4_A 3 PGLPSGWEERKDAKGRTYYVNHNNRTTTWTRPI 35 (36)
T ss_dssp TTCCTTEEEEECSSSCEEEEETTTTEEESSCCC
T ss_pred CCCCCCCEEEECCCCCEEEEECCCCCEeCcCCC
Confidence 367889999999999999999999999999995
No 32
>2law_A Yorkie homolog; YAP, SMAD1, CDK, signal transduction, signaling protein-TRAN complex; NMR {Homo sapiens}
Probab=98.58 E-value=2e-08 Score=77.33 Aligned_cols=34 Identities=24% Similarity=0.478 Sum_probs=31.0
Q ss_pred ccCCCCCceEEEcCCCCeeeecCCCCceeccCCC
Q 002026 352 VNEQLDAWTAHKTDTGIVYYYNAVTGESTYEKPA 385 (978)
Q Consensus 352 ~~~~~~~W~e~~~~dGr~YYyN~~T~~StWekP~ 385 (978)
...++.+|+++.+.+|++||||+.|++|+|++|.
T Consensus 4 ~~~LP~gWe~~~~~~G~~Yy~nh~t~~ttW~~Pr 37 (38)
T 2law_A 4 EGPLPDGWEQAMTQDGEIYYINHKNKTTSWLDPR 37 (38)
T ss_dssp -CCCSSSCCEEEETTTEEEEEETTTTEEESSCTT
T ss_pred cCCCCCCcEEEECCCCCEEEEECCCCCEeCCCCC
Confidence 3468899999999999999999999999999995
No 33
>2dmv_A Itchy homolog E3 ubiquitin protein ligase; WW domain, three stranded antiparallel beta sheet, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.57 E-value=4.2e-08 Score=77.50 Aligned_cols=34 Identities=26% Similarity=0.631 Sum_probs=31.8
Q ss_pred cCCCCCceEEEcCCCCeeeecCCCCceeccCCCC
Q 002026 353 NEQLDAWTAHKTDTGIVYYYNAVTGESTYEKPAG 386 (978)
Q Consensus 353 ~~~~~~W~e~~~~dGr~YYyN~~T~~StWekP~~ 386 (978)
..++.+|+++.+++|++||||+.|++|+|++|..
T Consensus 6 ~~LP~GWe~~~d~~Gr~YY~n~~t~~T~We~P~~ 39 (43)
T 2dmv_A 6 SGLPPGWEQRVDQHGRVYYVDHVEKRTTWDRPSG 39 (43)
T ss_dssp CSCCTTEEEEECTTSCEEEEETTTCCEESSCSSS
T ss_pred CCCCCCceEEECCCCCEEEEECCCCCEecCCcCC
Confidence 4688899999999999999999999999999975
No 34
>1wr7_A NEDD4-2; all-beta, ligase; NMR {Mus musculus}
Probab=98.55 E-value=3.7e-08 Score=77.02 Aligned_cols=33 Identities=18% Similarity=0.373 Sum_probs=30.9
Q ss_pred cCCCCCceEEEcCCCCeeeecCCCCceeccCCC
Q 002026 353 NEQLDAWTAHKTDTGIVYYYNAVTGESTYEKPA 385 (978)
Q Consensus 353 ~~~~~~W~e~~~~dGr~YYyN~~T~~StWekP~ 385 (978)
..++.+|+++.+++|++||||+.|++|+|++|.
T Consensus 7 ~~LP~gWe~~~~~~G~~Yy~n~~t~~t~We~Pr 39 (41)
T 1wr7_A 7 SFLPPGWEMRIAPNGRPFFIDHNTKTTTWEDPR 39 (41)
T ss_dssp CSSCTTEEEEECTTSCEEEEETTTTEEESSCGG
T ss_pred CCCCCCcEEEEcCCCCEEEEECCCCCeecCCCC
Confidence 468899999999999999999999999999995
No 35
>2ysg_A Syntaxin-binding protein 4; synip, STXBP4, WW domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.22.1.1
Probab=98.55 E-value=5.1e-08 Score=75.87 Aligned_cols=33 Identities=27% Similarity=0.495 Sum_probs=31.1
Q ss_pred cCCCCCceEEEcCCCCeeeecCCCCceeccCCC
Q 002026 353 NEQLDAWTAHKTDTGIVYYYNAVTGESTYEKPA 385 (978)
Q Consensus 353 ~~~~~~W~e~~~~dGr~YYyN~~T~~StWekP~ 385 (978)
..++.+|++..+++|++||||+.|++|+|++|.
T Consensus 6 ~~LP~gWe~~~~~~Gr~Yy~nh~t~~ttW~~P~ 38 (40)
T 2ysg_A 6 SGLPYGWEEAYTADGIKYFINHVTQTTSWIHPV 38 (40)
T ss_dssp SCCCTTEEEEECSSSCEEEEESSSCCEECCCCC
T ss_pred CCCCCCcEEEEcCCCCEEEEECCCCcCcCCCCC
Confidence 468899999999999999999999999999996
No 36
>1uzc_A Hypothetical protein FLJ21157; nuclear protein, structure, transcription, phosphopeptide recognition, RNA polymerase II carboxyl- terminal domain; NMR {Homo sapiens} SCOP: a.159.2.1 PDB: 2kzg_A 2lks_A 2l9v_A
Probab=98.52 E-value=1.2e-07 Score=82.86 Aligned_cols=54 Identities=24% Similarity=0.413 Sum_probs=49.0
Q ss_pred HHHHHHHHHHHHhhhcCCCCCccHHHHHHHhcCCchhccCCH-HHHHHHHHHHHHHh
Q 002026 643 KAAIEGFKQLLEEVSEDIDHSTDYQTFKKKWGSDPRFEALDR-KDRELLLNERVLPL 698 (978)
Q Consensus 643 k~Ake~F~~LLee~~~~I~~~T~W~e~~kk~~~DpRfkaLd~-~ERE~LF~EyI~~L 698 (978)
++|+++|+.||.+. +|+++++|..+.+++.+||||.+|.. .+|+++|++|+...
T Consensus 15 eea~~~F~~LL~e~--~V~~~~tWe~~~~~i~~DpRY~al~~~~eRk~~F~ey~~~r 69 (71)
T 1uzc_A 15 EEAKQAFKELLKEK--RVPSNASWEQAMKMIINDPRYSALAKLSEKKQAFNAYKVQT 69 (71)
T ss_dssp HHHHHHHHHHHHHT--TCCTTCCHHHHHHHHHTSGGGGGCSSHHHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHHHc--CcCCCCCHHHHHHHHccCccccccCCHHHHHHHHHHHHHHh
Confidence 46788999999997 59999999999999999999999974 99999999998654
No 37
>1ymz_A CC45; artificial protein, computational design, unknown function; NMR {Synthetic} SCOP: k.22.1.1
Probab=98.52 E-value=4.1e-08 Score=77.51 Aligned_cols=31 Identities=29% Similarity=0.761 Sum_probs=28.9
Q ss_pred CCcEEEEcCCCceEEEeCCCCeeeccCChhH
Q 002026 409 TDWALVTTNDGKKYYYNSKMKVSSWQIPSEV 439 (978)
Q Consensus 409 ~~W~e~~t~dGr~YyyN~~T~~S~We~P~el 439 (978)
.+|+++.+.+|++||||..|++|+|+.|..+
T Consensus 11 ~gW~~~~~~~Gr~YY~n~~T~~t~We~P~~~ 41 (43)
T 1ymz_A 11 PGWERRTDVEGKVYYFNVRTLTTTWERPTII 41 (43)
T ss_dssp SSEEEEECTTSCEEEEETTTTEEESSCCCSC
T ss_pred CCCEEEECCCCCEEEEECCCCCCcccCCccc
Confidence 5799999999999999999999999999864
No 38
>1ywi_A Formin-binding protein 3; WW domain, class II, proline-rich peptides, protein-protein interactions, structural protein; NMR {Homo sapiens} SCOP: b.72.1.1 PDB: 1ywj_A 1zr7_A 2dyf_A
Probab=98.50 E-value=6.1e-08 Score=75.85 Aligned_cols=30 Identities=37% Similarity=0.917 Sum_probs=27.2
Q ss_pred CCcEEEEcCCCceEEEeCCCCeeeccCChh
Q 002026 409 TDWALVTTNDGKKYYYNSKMKVSSWQIPSE 438 (978)
Q Consensus 409 ~~W~e~~t~dGr~YyyN~~T~~S~We~P~e 438 (978)
.+|.++++.+|++||||..|++|+|++|.+
T Consensus 12 ~~W~e~~~~~G~~YYyN~~T~eS~We~P~e 41 (41)
T 1ywi_A 12 SMWTEHKSPDGRTYYYNTETKQSTWEKPDD 41 (41)
T ss_dssp CCEEEEEETTTEEEEEETTTTEEEESCC--
T ss_pred CCcEEEECCCCCEEEEECCCCCEEeCCCCC
Confidence 689999999999999999999999999975
No 39
>2jv4_A Peptidyl-prolyl CIS/trans isomerase; ppiase domain, WW domain group IV, rotamase; NMR {Emericella nidulans}
Probab=98.49 E-value=7.1e-08 Score=79.89 Aligned_cols=35 Identities=29% Similarity=0.606 Sum_probs=31.9
Q ss_pred cCCCCCceEEEcC-CCCeeeecCCCCceeccCCCCC
Q 002026 353 NEQLDAWTAHKTD-TGIVYYYNAVTGESTYEKPAGF 387 (978)
Q Consensus 353 ~~~~~~W~e~~~~-dGr~YYyN~~T~~StWekP~~l 387 (978)
..++.+|+++.+. +|++||||+.|++|+|++|...
T Consensus 6 ~~LP~GW~~~~~~~~Gr~YY~N~~T~~sqWe~P~~~ 41 (54)
T 2jv4_A 6 TGLPAGWEVRHSNSKNLPYYFNPATRESRWEPPADT 41 (54)
T ss_dssp CCCCSSCCEEECSSSSCEEEEETTTTEEESSCCTTS
T ss_pred CCCCCCcEEEEECCCCCEEEEECCCCcEEecCCCCc
Confidence 4688999999987 8999999999999999999864
No 40
>2dk1_A WW domain-binding protein 4; WBP-4, formin- binding protein 21, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.72.1.1
Probab=98.48 E-value=2.6e-08 Score=81.14 Aligned_cols=35 Identities=26% Similarity=0.527 Sum_probs=31.9
Q ss_pred CCCcEEEEcCCCceEEEeCCCCeeeccCChhHHHh
Q 002026 408 GTDWALVTTNDGKKYYYNSKMKVSSWQIPSEVTEL 442 (978)
Q Consensus 408 ~~~W~e~~t~dGr~YyyN~~T~~S~We~P~el~~l 442 (978)
.+.|.++++.+|++||||..|++|+|++|++|...
T Consensus 6 ~~~W~e~~s~~G~~YYyN~~T~eS~WekP~~~~~~ 40 (50)
T 2dk1_A 6 SGRWVEGITSEGYHYYYDLISGASQWEKPEGFQGD 40 (50)
T ss_dssp SCCEEECCCSTTCCCEEESSSCCEESSCCTTCCCC
T ss_pred CCCeEEEECCCCCEEEEECCCCCEEeeCChhhhhh
Confidence 46899999999999999999999999999997653
No 41
>2ysf_A E3 ubiquitin-protein ligase itchy homolog; AIP4, NAPP1, WW domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.22.1.1
Probab=98.48 E-value=9.8e-08 Score=74.25 Aligned_cols=35 Identities=23% Similarity=0.408 Sum_probs=31.9
Q ss_pred ccCCCCCceEEEcCCCCeeeecCCCCceeccCCCC
Q 002026 352 VNEQLDAWTAHKTDTGIVYYYNAVTGESTYEKPAG 386 (978)
Q Consensus 352 ~~~~~~~W~e~~~~dGr~YYyN~~T~~StWekP~~ 386 (978)
...++.+|+++.+.+|++||||+.|++|+|++|..
T Consensus 5 ~~~LP~gWe~~~~~~G~~Yy~nh~t~~ttw~~Pr~ 39 (40)
T 2ysf_A 5 SSGLPEGWEMRFTVDGIPYFVDHNRRTTTYIDPRT 39 (40)
T ss_dssp CCCCCSSEEEEECTTCCEEEEETTTCCEESSCTTT
T ss_pred cCCCCcCcEEEEcCCCCEEEEECCCCcEecCCCCC
Confidence 34688999999999999999999999999999963
No 42
>2kpz_A E3 ubiquitin-protein ligase NEDD4; WW domain, HTLV1, NEDD4, human modular domain, complex, HOST interaction, ligase; NMR {Homo sapiens} PDB: 2kq0_A 2laj_A*
Probab=98.46 E-value=8.6e-08 Score=77.84 Aligned_cols=36 Identities=17% Similarity=0.296 Sum_probs=31.9
Q ss_pred ccCCCCCceEEEcCCCCeeeecCCCCceeccCCCCC
Q 002026 352 VNEQLDAWTAHKTDTGIVYYYNAVTGESTYEKPAGF 387 (978)
Q Consensus 352 ~~~~~~~W~e~~~~dGr~YYyN~~T~~StWekP~~l 387 (978)
...++.+|+++.+++|++||||+.|++|+|++|...
T Consensus 10 ~~~LP~gWe~~~~~~G~~Yy~nh~T~~ttWe~Pr~~ 45 (49)
T 2kpz_A 10 QGFLPKGWEVRHAPNGRPFFIDHNTKTTTWEDPRLK 45 (49)
T ss_dssp --CCCTTEEEEECTTSCEEEEETTTTEEESSCTTCC
T ss_pred CCCCCCCcEEEECCCCCEEEEECCCCCEecCCCCCC
Confidence 346889999999999999999999999999999753
No 43
>2dod_A Transcription elongation regulator 1; FF domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: a.159.2.1
Probab=98.46 E-value=9.4e-08 Score=85.66 Aligned_cols=56 Identities=30% Similarity=0.539 Sum_probs=51.3
Q ss_pred HHHHHHHHHhhhcCCCCCCCChHHHHHHhccCchhhcCCcccHHHHHHHHHHHHHHH
Q 002026 712 AAASSFKSMLREKGDITLSSRWSKVKDILRDDPRYKSVRHEDREVIFNEYVRELKAA 768 (978)
Q Consensus 712 ~a~~~Fk~LL~e~~~It~~T~Wsdvk~~L~~DpRy~aL~~~dRe~lFeeyI~eLe~~ 768 (978)
.++..|++||.+. +|+++++|..+...|.+||||.+|...+|..+|++|+.+...+
T Consensus 18 ea~~~Fk~LL~e~-~V~p~~tWe~~~~~i~~DpRY~aL~~~eRK~~F~~y~~~r~~e 73 (82)
T 2dod_A 18 ARMKQFKDMLLER-GVSAFSTWEKELHKIVFDPRYLLLNPKERKQVFDQYVKTRAEE 73 (82)
T ss_dssp HHHHHHHHHHHHT-TCCSSSCHHHHHHHHHTCSGGGTSCHHHHHHHHHHHHHHHHHG
T ss_pred HHHHHHHHHHHHc-CcCCCCCHHHHHHHHccCCccccCCHHHHHHHHHHHHHHHHHH
Confidence 4668899999998 7999999999999999999999999889999999999987553
No 44
>2djy_A SMAD ubiquitination regulatory factor 2; beta sheet, polyproline type II helix, PPII, ligase/signaling protein complex; NMR {Homo sapiens} PDB: 2lb1_A
Probab=98.44 E-value=1.1e-07 Score=74.77 Aligned_cols=34 Identities=21% Similarity=0.421 Sum_probs=31.7
Q ss_pred cCCCCCceEEEcCCCCeeeecCCCCceeccCCCC
Q 002026 353 NEQLDAWTAHKTDTGIVYYYNAVTGESTYEKPAG 386 (978)
Q Consensus 353 ~~~~~~W~e~~~~dGr~YYyN~~T~~StWekP~~ 386 (978)
..++.+|++..+.+|++||||+.|++|+|++|..
T Consensus 6 ~~LP~GWe~~~~~~G~~Yy~nh~t~~ttW~~Pr~ 39 (42)
T 2djy_A 6 GPLPPGWEIRNTATGRVYFVDHNNRTTQFTDPRL 39 (42)
T ss_dssp SCCCSSEEEEECSSSCEEEEETTTTEEESSCTTT
T ss_pred CCCCcCcEEEECCCCCEEEEECCCCCEeCCCCCC
Confidence 4688999999999999999999999999999975
No 45
>2l4j_A YES-associated protein 2 (YAP2); WW domain, medaka, transcription; NMR {Oryzias latipes}
Probab=98.44 E-value=1.5e-07 Score=75.46 Aligned_cols=35 Identities=20% Similarity=0.390 Sum_probs=32.1
Q ss_pred ccCCCCCceEEEcCCCCeeeecCCCCceeccCCCC
Q 002026 352 VNEQLDAWTAHKTDTGIVYYYNAVTGESTYEKPAG 386 (978)
Q Consensus 352 ~~~~~~~W~e~~~~dGr~YYyN~~T~~StWekP~~ 386 (978)
...++.+|++..+.+|++||||+.|++|+|++|..
T Consensus 9 ~~~LP~gWe~~~~~~G~~Yyinh~t~~TtWe~Pr~ 43 (46)
T 2l4j_A 9 SGPLPEGWEQAITPEGEIYYINHKNKTTSWLDPRL 43 (46)
T ss_dssp TSCCCTTCEEEECTTSCEEEEETTTTEEECSCCSS
T ss_pred CCCCCcCceeEECCCCCEEEEECCCCCEeCCCCCc
Confidence 34689999999999999999999999999999974
No 46
>1e0n_A Hypothetical protein; YJQ8WW domain, WW domain, saccharomyces cerevisae, YJQ8 protein; NMR {Saccharomyces cerevisiae} SCOP: b.72.1.1
Probab=98.44 E-value=8.5e-08 Score=68.40 Aligned_cols=27 Identities=26% Similarity=0.427 Sum_probs=24.9
Q ss_pred CCceEEEcCCCCeeeecCCCCceeccCC
Q 002026 357 DAWTAHKTDTGIVYYYNAVTGESTYEKP 384 (978)
Q Consensus 357 ~~W~e~~~~dGr~YYyN~~T~~StWekP 384 (978)
++|+ +...+|+.||||..|++|+|++|
T Consensus 1 ~gWe-~~~~~g~~YYyN~~T~~s~We~P 27 (27)
T 1e0n_A 1 PGWE-IIHENGRPLYYNAEQKTKLHYPP 27 (27)
T ss_dssp CCEE-EEESSSSEEEEETTTTEEESSCC
T ss_pred CCCe-EECCCCCeEEEECCCCCEeccCC
Confidence 4799 87889999999999999999998
No 47
>2ez5_W Dnedd4, E3 ubiquitin-protein ligase NEDD4; WW domain, PY motif, binding affinity, signalling protein,ligase; NMR {Drosophila melanogaster}
Probab=98.42 E-value=1.5e-07 Score=75.46 Aligned_cols=34 Identities=12% Similarity=0.388 Sum_probs=31.8
Q ss_pred cCCCCCceEEEcCCCCeeeecCCCCceeccCCCC
Q 002026 353 NEQLDAWTAHKTDTGIVYYYNAVTGESTYEKPAG 386 (978)
Q Consensus 353 ~~~~~~W~e~~~~dGr~YYyN~~T~~StWekP~~ 386 (978)
..++.+|+++.+.+|++||||+.|++|+|++|..
T Consensus 9 ~~LP~gWe~~~~~~Gr~Yyinh~t~~TtW~~Pr~ 42 (46)
T 2ez5_W 9 EPLPPRWSMQVAPNGRTFFIDHASRRTTWIDPRN 42 (46)
T ss_dssp CCCCTTEEEEECTTSSEEEEETTTTEEESBCTTT
T ss_pred CCCCcCcEEEEcCCCCEEEEECCCCCEeccCCCC
Confidence 4688999999999999999999999999999975
No 48
>1i5h_W Rnedd4, ubiquitin ligase NEDD4; NEDD4, WW domains, ENAC, PY motif, liddle syndrome, proline-rich, ligase; NMR {Rattus norvegicus} SCOP: b.72.1.1 PDB: 1yiu_A 2jo9_A 2joc_A*
Probab=98.42 E-value=1.6e-07 Score=76.53 Aligned_cols=36 Identities=17% Similarity=0.373 Sum_probs=32.7
Q ss_pred ccCCCCCceEEEcCCCCeeeecCCCCceeccCCCCC
Q 002026 352 VNEQLDAWTAHKTDTGIVYYYNAVTGESTYEKPAGF 387 (978)
Q Consensus 352 ~~~~~~~W~e~~~~dGr~YYyN~~T~~StWekP~~l 387 (978)
...++.+|+++.+.+|++||||+.|++|+|++|...
T Consensus 9 ~~~LP~gWe~~~~~~Gr~Yy~nh~t~~T~We~Pr~~ 44 (50)
T 1i5h_W 9 LGPLPPGWEERTHTDGRVFFINHNIKKTQWEDPRMQ 44 (50)
T ss_dssp CSSCSTTEEEEECTTSCEEEEETTTTEEESSCTTTS
T ss_pred CCCCCcCcEEEEcCCCCEEEEECCCCCEEeeCCCCC
Confidence 346889999999999999999999999999999753
No 49
>2ysb_A Salvador homolog 1 protein; WW domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: k.22.1.1
Probab=98.39 E-value=1.7e-07 Score=76.19 Aligned_cols=34 Identities=21% Similarity=0.351 Sum_probs=31.8
Q ss_pred CCCCCceEEEcCCCCeeeecCCCCceeccCCCCC
Q 002026 354 EQLDAWTAHKTDTGIVYYYNAVTGESTYEKPAGF 387 (978)
Q Consensus 354 ~~~~~W~e~~~~dGr~YYyN~~T~~StWekP~~l 387 (978)
.++.+|++..+++|++||||+.|++|+|++|...
T Consensus 11 ~LP~gWe~~~~~~Gr~Yy~nh~t~~T~W~~P~~~ 44 (49)
T 2ysb_A 11 PLPPGWSVDWTMRGRKYYIDHNTNTTHWSHPLES 44 (49)
T ss_dssp CCCTTEEEEECSSSCEEEEETTTTEEESSCTTTS
T ss_pred CCCCCceEEECCCCCEEEEEcCCCCEEecCCCCC
Confidence 5888999999999999999999999999999863
No 50
>2zaj_A Membrane-associated guanylate kinase, WW and PDZ domain-containing protein 1; BAI1-associated protein 1 (BAP-1); NMR {Homo sapiens}
Probab=98.39 E-value=1.7e-07 Score=76.14 Aligned_cols=36 Identities=25% Similarity=0.487 Sum_probs=32.7
Q ss_pred cccCCCCCceEEEcCCCCeeeecCCCCceeccCCCC
Q 002026 351 SVNEQLDAWTAHKTDTGIVYYYNAVTGESTYEKPAG 386 (978)
Q Consensus 351 a~~~~~~~W~e~~~~dGr~YYyN~~T~~StWekP~~ 386 (978)
....++.+|++..+++|++||||+.|++|+|++|..
T Consensus 10 ~~~~LP~GWe~~~d~~Gr~YYvnh~t~~T~We~P~~ 45 (49)
T 2zaj_A 10 SELELPAGWEKIEDPVYGIYYVDHINRKTQYENPSG 45 (49)
T ss_dssp CSSCCCTTEEEEEETTTEEEEEETTTTEEESSCCCS
T ss_pred CCCCCCcCceEEEcCCCCEEEEeCCCCCEecCCCCC
Confidence 345789999999999999999999999999999975
No 51
>1e0m_A Wwprototype; SH3 prototype, protein design, de novo protein; NMR {} SCOP: k.22.1.1
Probab=98.38 E-value=2.5e-07 Score=70.49 Aligned_cols=33 Identities=39% Similarity=0.795 Sum_probs=29.8
Q ss_pred cCCCCCcEEEEcCCCceEEEeCCCCeeeccCChh
Q 002026 405 HLTGTDWALVTTNDGKKYYYNSKMKVSSWQIPSE 438 (978)
Q Consensus 405 ~l~~~~W~e~~t~dGr~YyyN~~T~~S~We~P~e 438 (978)
+|| .+|+++.+.+|++||||..|++|+|++|..
T Consensus 3 ~LP-~gW~~~~~~~G~~Yy~n~~t~~t~W~~P~~ 35 (37)
T 1e0m_A 3 GLP-PGWDEYKTHNGKTYYYNHNTKTSTWTDPRM 35 (37)
T ss_dssp CSC-TTEEEEECSSCCEEEEETTTTEEESSCTTT
T ss_pred CCC-CCcEEEECCCCCEEEEECCCCCeeeeCcCC
Confidence 355 789999999999999999999999999974
No 52
>2ho2_A Fe65 protein, amyloid beta A4 protein-binding family B member 1; WW domain, beta sheet, Fe65, protein binding; 1.33A {Homo sapiens} SCOP: b.72.1.1 PDB: 2idh_A* 2oei_A
Probab=98.34 E-value=3e-07 Score=70.72 Aligned_cols=32 Identities=25% Similarity=0.652 Sum_probs=29.9
Q ss_pred CCCCCceEEEcCCCCeeeecCCCCceeccCCCC
Q 002026 354 EQLDAWTAHKTDTGIVYYYNAVTGESTYEKPAG 386 (978)
Q Consensus 354 ~~~~~W~e~~~~dGr~YYyN~~T~~StWekP~~ 386 (978)
.++.+|++..+.+| +||||+.|++|+|++|..
T Consensus 3 ~LP~GWe~~~d~~g-~YY~n~~t~~tqWe~P~~ 34 (38)
T 2ho2_A 3 DLPAGWMRVQDTSG-TYYWHIPTGTTQWEPPGR 34 (38)
T ss_dssp CSCTTEEEEECSSC-EEEEETTTTEEESSCCCC
T ss_pred cCCCCceEEEeCCC-CEEEecCCCCEeccCCCC
Confidence 57889999999999 999999999999999974
No 53
>2dwv_A Salvador homolog 1 protein; WW domain, dimer, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}
Probab=98.31 E-value=5.4e-07 Score=73.16 Aligned_cols=45 Identities=27% Similarity=0.427 Sum_probs=37.7
Q ss_pred CceeccCCCCCCCCCCCCCCCCCCcccccCCCCCcEEEEcCCCceEEEeCCCCeeeccCChh
Q 002026 377 GESTYEKPAGFKGEPDKVPVQPTPISMEHLTGTDWALVTTNDGKKYYYNSKMKVSSWQIPSE 438 (978)
Q Consensus 377 ~~StWekP~~l~~~~e~~~~qp~P~~~~~l~~~~W~e~~t~dGr~YyyN~~T~~S~We~P~e 438 (978)
+.|+|+.|..- ..|| .+|++..+.+|++||+|..|++|+|+.|..
T Consensus 1 ~tt~W~~P~~~----------------~~LP-~GWe~~~d~~g~~YYvnh~t~~T~We~P~~ 45 (49)
T 2dwv_A 1 GSSGSSGPLER----------------EGLP-PGWERVESSEFGTYYVDHTNKRAQYRHPSG 45 (49)
T ss_dssp CCSSSCCSCCS----------------SCCC-TTEEEEEETTTEEEEEETTTTEEESSCCCC
T ss_pred CeecCcCCCCC----------------CCCC-cCcEEEECCCCCEEEEECCCCCEeccCcCC
Confidence 46899999742 1355 679999999999999999999999999963
No 54
>2jx8_A Hpcif1, phosphorylated CTD-interacting factor 1; protein fragment, WW domain, triple-standed beta-sheet, alpha-helix, nucleus, phosphorylation; NMR {Homo sapiens}
Probab=98.31 E-value=1.2e-07 Score=77.94 Aligned_cols=35 Identities=23% Similarity=0.335 Sum_probs=31.2
Q ss_pred cCCCCCceEEEcC-CCCeeeecCCCCceeccCCCCC
Q 002026 353 NEQLDAWTAHKTD-TGIVYYYNAVTGESTYEKPAGF 387 (978)
Q Consensus 353 ~~~~~~W~e~~~~-dGr~YYyN~~T~~StWekP~~l 387 (978)
..++.+|+++.+. +|+.||||..|++|+||+|.+.
T Consensus 9 ~~LP~gW~~~~~~~~gr~YY~N~~T~~SqWe~P~~~ 44 (52)
T 2jx8_A 9 ELVHAGWEKCWSRRENRPYYFNRFTNQSLWEMPVLG 44 (52)
T ss_dssp HHHHHTCCEEEETTTTEEEEEETTTTEEESSCCCCT
T ss_pred CCCCcCcEEEEccccCCEEEEECCCCCEEeCCCCCC
Confidence 3567899999986 8999999999999999999875
No 55
>1wr7_A NEDD4-2; all-beta, ligase; NMR {Mus musculus}
Probab=98.28 E-value=5.9e-07 Score=70.21 Aligned_cols=34 Identities=18% Similarity=0.628 Sum_probs=30.3
Q ss_pred ccCCCCCcEEEEcCCCceEEEeCCCCeeeccCChh
Q 002026 404 EHLTGTDWALVTTNDGKKYYYNSKMKVSSWQIPSE 438 (978)
Q Consensus 404 ~~l~~~~W~e~~t~dGr~YyyN~~T~~S~We~P~e 438 (978)
..|+ .+|++..+.+|++||||..|++|+|+.|..
T Consensus 7 ~~LP-~gWe~~~~~~G~~Yy~n~~t~~t~We~Pr~ 40 (41)
T 1wr7_A 7 SFLP-PGWEMRIAPNGRPFFIDHNTKTTTWEDPRL 40 (41)
T ss_dssp CSSC-TTEEEEECTTSCEEEEETTTTEEESSCGGG
T ss_pred CCCC-CCcEEEEcCCCCEEEEECCCCCeecCCCCC
Confidence 3466 789999999999999999999999999963
No 56
>2ysh_A GAS-7, growth-arrest-specific protein 7; WW domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.22.1.1
Probab=98.28 E-value=5.6e-07 Score=69.85 Aligned_cols=32 Identities=28% Similarity=0.733 Sum_probs=29.3
Q ss_pred cCCCCCcEEEEcCCCceEEEeCCCCeeeccCCh
Q 002026 405 HLTGTDWALVTTNDGKKYYYNSKMKVSSWQIPS 437 (978)
Q Consensus 405 ~l~~~~W~e~~t~dGr~YyyN~~T~~S~We~P~ 437 (978)
.|+ .+|+++.+.+|++||||..|++|+|+.|.
T Consensus 7 ~LP-~gW~~~~d~~Gr~YY~n~~T~~t~We~P~ 38 (40)
T 2ysh_A 7 GLP-PGWQSYLSPQGRRYYVNTTTNETTWERPS 38 (40)
T ss_dssp SCC-TTCEEEECTTSCEEEECSSSCCEESSSCC
T ss_pred CCC-CCceEEECCCCCEEEEECCCCCEeCCCCC
Confidence 355 68999999999999999999999999996
No 57
>2ysc_A Amyloid beta A4 precursor protein-binding family B member 3; Fe65-like protein 2, WW domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.72.1.1
Probab=98.28 E-value=4e-07 Score=70.44 Aligned_cols=32 Identities=19% Similarity=0.627 Sum_probs=29.4
Q ss_pred cCCCCCceEEEcCCCCeeeecCCCCceeccCCC
Q 002026 353 NEQLDAWTAHKTDTGIVYYYNAVTGESTYEKPA 385 (978)
Q Consensus 353 ~~~~~~W~e~~~~dGr~YYyN~~T~~StWekP~ 385 (978)
..++.+|+++.+++| .||||+.|++|+|++|.
T Consensus 7 ~~LP~GWe~~~~~~G-~YY~n~~t~~tqWe~P~ 38 (39)
T 2ysc_A 7 GGLPPGWRKIHDAAG-TYYWHVPSGSTQWQRPT 38 (39)
T ss_dssp CCCCTTEEEEEETTE-EEEEESSSCCEESSCCC
T ss_pred CCCCCCcEEEEcCCC-CEEEEcCCCCEeccCCC
Confidence 468899999999999 59999999999999995
No 58
>2jxw_A WW domain-binding protein 4; WW domain containing protein, FBP21, WBP4, metal- binding, mRNA processing, mRNA splicing, nucleus, polymorphism; NMR {Homo sapiens}
Probab=98.27 E-value=3.6e-07 Score=80.50 Aligned_cols=33 Identities=39% Similarity=0.787 Sum_probs=30.4
Q ss_pred CCCCCceEEEcCCCCeeeecCCCCceeccCCCC
Q 002026 354 EQLDAWTAHKTDTGIVYYYNAVTGESTYEKPAG 386 (978)
Q Consensus 354 ~~~~~W~e~~~~dGr~YYyN~~T~~StWekP~~ 386 (978)
.+..+|.++.+++||+||||+.|++|+|++|.+
T Consensus 43 ~~~~~W~~~~~~~Gr~YyyN~~T~~s~We~P~e 75 (75)
T 2jxw_A 43 AVKTVWVEGLSEDGFTYYYNTETGESRWEKPDD 75 (75)
T ss_dssp SCCCSEEEEEETTTEEEEEETTTTEEESSCCCC
T ss_pred CCCccEEEEECCCCCEEEEECcCCCEeccCcCC
Confidence 456789999999999999999999999999974
No 59
>2yse_A Membrane-associated guanylate kinase, WW and PDZ domain-containing protein 1; MAGI-1, WW domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.26 E-value=4.5e-07 Score=76.58 Aligned_cols=36 Identities=22% Similarity=0.376 Sum_probs=32.4
Q ss_pred cccCCCCCceEEEcCCCCeeeecCCCCceeccCCCC
Q 002026 351 SVNEQLDAWTAHKTDTGIVYYYNAVTGESTYEKPAG 386 (978)
Q Consensus 351 a~~~~~~~W~e~~~~dGr~YYyN~~T~~StWekP~~ 386 (978)
....++.+|++..+++|++||||+.|+.|+|++|..
T Consensus 10 ~~~~LP~GWE~~~d~~Gr~YYvnh~tk~T~We~P~~ 45 (60)
T 2yse_A 10 SELELPAGWEKIEDPVYGIYYVDHINRKTQYENPVL 45 (60)
T ss_dssp CCSSCCSSEEEEECSSSCEEEEETTTTEEESSCHHH
T ss_pred CCCCCCCCcEEEECCCCCEEEEeCCCCCeeccCCCc
Confidence 345789999999999999999999999999999953
No 60
>2juc_A PRE-mRNA-splicing factor URN1; FF, helical bundle, solution, mRNA processing, nucleus, spliceosome, unknown function; NMR {Saccharomyces cerevisiae}
Probab=98.25 E-value=5.9e-07 Score=75.23 Aligned_cols=50 Identities=22% Similarity=0.450 Sum_probs=46.2
Q ss_pred HHHHHHHHhhhcCCCCCCCChHHHHHHhccCchhhcCCc-ccHHHHHHHHHH
Q 002026 713 AASSFKSMLREKGDITLSSRWSKVKDILRDDPRYKSVRH-EDREVIFNEYVR 763 (978)
Q Consensus 713 a~~~Fk~LL~e~~~It~~T~Wsdvk~~L~~DpRy~aL~~-~dRe~lFeeyI~ 763 (978)
++..|++||.+. .|++.++|.....+|.+||||.+|+. +.|+++|++|++
T Consensus 8 ~k~~F~~LL~e~-~InPys~W~~e~~ki~~DpRY~~l~s~~~R~e~F~ew~r 58 (59)
T 2juc_A 8 ERNIFFELFDRY-KLDKFSTWSLQSKKIENDPDFYKIRDDTVRESLFEEWCG 58 (59)
T ss_dssp SHHHHHHHHHHT-TCCTTTCSHHHHHHHSSSTTGGGSSCHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHc-CCCCCCchhhhcccccCCCCeeecCChHHHHHHHHHHhh
Confidence 357899999998 69999999999999999999999987 899999999986
No 61
>1wr3_A Ubiquitin-protein ligase NEDD4-2; all-beta; NMR {Mus musculus}
Probab=98.25 E-value=6.5e-07 Score=67.90 Aligned_cols=32 Identities=31% Similarity=0.677 Sum_probs=29.1
Q ss_pred cCCCCCcEEEEcCCCceEEEeCCCCeeeccCCh
Q 002026 405 HLTGTDWALVTTNDGKKYYYNSKMKVSSWQIPS 437 (978)
Q Consensus 405 ~l~~~~W~e~~t~dGr~YyyN~~T~~S~We~P~ 437 (978)
+|| .+|++..+.+|++||||..|++|+|+.|.
T Consensus 4 ~LP-~GWe~~~d~~G~~Yy~n~~t~~t~We~P~ 35 (36)
T 1wr3_A 4 PLP-PGWEEKVDNLGRTYYVNHNNRSTQWHRPS 35 (36)
T ss_dssp CSC-TTEEEEECSSSCEEEEETTTCCEESSCSC
T ss_pred CCC-CCCEEEECCCCCEEEEECCCCCEeeeCcC
Confidence 355 68999999999999999999999999995
No 62
>1e0n_A Hypothetical protein; YJQ8WW domain, WW domain, saccharomyces cerevisae, YJQ8 protein; NMR {Saccharomyces cerevisiae} SCOP: b.72.1.1
Probab=98.23 E-value=6.5e-07 Score=63.83 Aligned_cols=26 Identities=27% Similarity=0.676 Sum_probs=24.6
Q ss_pred CcEEEEcCCCceEEEeCCCCeeeccCC
Q 002026 410 DWALVTTNDGKKYYYNSKMKVSSWQIP 436 (978)
Q Consensus 410 ~W~e~~t~dGr~YyyN~~T~~S~We~P 436 (978)
+|+ +....|+.||||..|++|+|+.|
T Consensus 2 gWe-~~~~~g~~YYyN~~T~~s~We~P 27 (27)
T 1e0n_A 2 GWE-IIHENGRPLYYNAEQKTKLHYPP 27 (27)
T ss_dssp CEE-EEESSSSEEEEETTTTEEESSCC
T ss_pred CCe-EECCCCCeEEEECCCCCEeccCC
Confidence 699 88899999999999999999987
No 63
>2jmf_A E3 ubiquitin-protein ligase suppressor of deltex; WW domain, solution, complex, ligase/signaling protein complex; NMR {Drosophila melanogaster} SCOP: b.72.1.1 PDB: 2op7_A
Probab=98.23 E-value=6.8e-07 Score=73.74 Aligned_cols=34 Identities=21% Similarity=0.404 Sum_probs=31.8
Q ss_pred cCCCCCceEEEcCCCCeeeecCCCCceeccCCCC
Q 002026 353 NEQLDAWTAHKTDTGIVYYYNAVTGESTYEKPAG 386 (978)
Q Consensus 353 ~~~~~~W~e~~~~dGr~YYyN~~T~~StWekP~~ 386 (978)
..++.+|++..+.+|++||||+.|++|+|+.|..
T Consensus 17 ~~LP~GWe~~~~~~Gr~Yyinh~tk~TtW~dPr~ 50 (53)
T 2jmf_A 17 GPLPPGWEIRYTAAGERFFVDHNTRRTTFEDPRP 50 (53)
T ss_dssp SCCCTTEEEEECTTSCEEEEETTTCCEESSCCCS
T ss_pred CCCCcCcEEEEcCCCCEEEEeCCCCcEecCCCCC
Confidence 4689999999999999999999999999999975
No 64
>2ysd_A Membrane-associated guanylate kinase, WW and PDZ domain-containing protein 1; MAGI1, WW domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.22.1.1
Probab=98.21 E-value=9.3e-07 Score=73.99 Aligned_cols=37 Identities=19% Similarity=0.443 Sum_probs=33.4
Q ss_pred cccCCCCCceEEEcCCCCeeeecCCCCceeccCCCCC
Q 002026 351 SVNEQLDAWTAHKTDTGIVYYYNAVTGESTYEKPAGF 387 (978)
Q Consensus 351 a~~~~~~~W~e~~~~dGr~YYyN~~T~~StWekP~~l 387 (978)
....++.+|++..+.+|++||||+.|++|+|+.|...
T Consensus 11 ~~~~LP~GWe~~~~~~Gr~Yyinh~tk~TtWe~Pr~~ 47 (57)
T 2ysd_A 11 NLGPLPENWEMAYTENGEVYFIDHNTKTTSWLDPRCL 47 (57)
T ss_dssp CCCSCCSSEEEEECSSCCEEEEETTTTEEESSCTTTC
T ss_pred CCCCCCcCcEEEECCCCCEEEEECCCCcEecCCCCCc
Confidence 3447899999999999999999999999999999864
No 65
>2dwv_A Salvador homolog 1 protein; WW domain, dimer, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}
Probab=98.20 E-value=6.2e-07 Score=72.80 Aligned_cols=34 Identities=18% Similarity=0.411 Sum_probs=31.7
Q ss_pred cCCCCCceEEEcCCCCeeeecCCCCceeccCCCC
Q 002026 353 NEQLDAWTAHKTDTGIVYYYNAVTGESTYEKPAG 386 (978)
Q Consensus 353 ~~~~~~W~e~~~~dGr~YYyN~~T~~StWekP~~ 386 (978)
..++.+|++..+++|++||+|+.|++|+|++|..
T Consensus 12 ~~LP~GWe~~~d~~g~~YYvnh~t~~T~We~P~~ 45 (49)
T 2dwv_A 12 EGLPPGWERVESSEFGTYYVDHTNKRAQYRHPSG 45 (49)
T ss_dssp SCCCTTEEEEEETTTEEEEEETTTTEEESSCCCC
T ss_pred CCCCcCcEEEECCCCCEEEEECCCCCEeccCcCC
Confidence 4688899999999999999999999999999975
No 66
>2law_A Yorkie homolog; YAP, SMAD1, CDK, signal transduction, signaling protein-TRAN complex; NMR {Homo sapiens}
Probab=98.19 E-value=9.4e-07 Score=67.94 Aligned_cols=32 Identities=41% Similarity=0.744 Sum_probs=29.2
Q ss_pred cCCCCCcEEEEcCCCceEEEeCCCCeeeccCCh
Q 002026 405 HLTGTDWALVTTNDGKKYYYNSKMKVSSWQIPS 437 (978)
Q Consensus 405 ~l~~~~W~e~~t~dGr~YyyN~~T~~S~We~P~ 437 (978)
+|| .+|++..+.+|++||||..|++|+|+.|+
T Consensus 6 ~LP-~gWe~~~~~~G~~Yy~nh~t~~ttW~~Pr 37 (38)
T 2law_A 6 PLP-DGWEQAMTQDGEIYYINHKNKTTSWLDPR 37 (38)
T ss_dssp CCS-SSCCEEEETTTEEEEEETTTTEEESSCTT
T ss_pred CCC-CCcEEEECCCCCEEEEECCCCCEeCCCCC
Confidence 355 78999999999999999999999999996
No 67
>1wr4_A Ubiquitin-protein ligase NEDD4-2; all-beta; NMR {Mus musculus} PDB: 2lb2_A*
Probab=98.17 E-value=1.3e-06 Score=66.13 Aligned_cols=32 Identities=25% Similarity=0.661 Sum_probs=29.0
Q ss_pred cCCCCCcEEEEcCCCceEEEeCCCCeeeccCCh
Q 002026 405 HLTGTDWALVTTNDGKKYYYNSKMKVSSWQIPS 437 (978)
Q Consensus 405 ~l~~~~W~e~~t~dGr~YyyN~~T~~S~We~P~ 437 (978)
.|| .+|++..+.+|++||||..|++|+|+.|.
T Consensus 4 ~LP-~gWe~~~d~~g~~Yy~n~~t~~t~W~~P~ 35 (36)
T 1wr4_A 4 GLP-SGWEERKDAKGRTYYVNHNNRTTTWTRPI 35 (36)
T ss_dssp TCC-TTEEEEECSSSCEEEEETTTTEEESSCCC
T ss_pred CCC-CCCEEEECCCCCEEEEECCCCCEeCcCCC
Confidence 355 68999999999999999999999999995
No 68
>2kyk_A E3 ubiquitin-protein ligase itchy homolog; LMP2A, PY motif, WW domain; NMR {Homo sapiens}
Probab=98.17 E-value=1.3e-06 Score=67.54 Aligned_cols=32 Identities=28% Similarity=0.658 Sum_probs=29.2
Q ss_pred cCCCCCcEEEEcCCCceEEEeCCCCeeeccCCh
Q 002026 405 HLTGTDWALVTTNDGKKYYYNSKMKVSSWQIPS 437 (978)
Q Consensus 405 ~l~~~~W~e~~t~dGr~YyyN~~T~~S~We~P~ 437 (978)
+|| .+|++..+.+|++||||..|++|+|+.|.
T Consensus 6 ~LP-~gWe~~~d~~G~~YY~n~~t~~t~We~P~ 37 (39)
T 2kyk_A 6 PLP-PGWERRVDNMGRIYYVDHFTRTTTWQRPT 37 (39)
T ss_dssp CCC-SSCEEEECTTSCEEEECSSSCCEECCCCC
T ss_pred CCC-CCcEEEEcCCCCEEEEECCCCCEeccCCC
Confidence 355 68999999999999999999999999996
No 69
>2e45_A Fe65 protein, amyloid beta A4 precursor protein-binding family B member 1; triple-stranded beta-sheet; NMR {Homo sapiens} SCOP: b.72.1.1
Probab=98.16 E-value=8.5e-07 Score=72.82 Aligned_cols=34 Identities=24% Similarity=0.595 Sum_probs=31.2
Q ss_pred ccCCCCCceEEEcCCCCeeeecCCCCceeccCCCC
Q 002026 352 VNEQLDAWTAHKTDTGIVYYYNAVTGESTYEKPAG 386 (978)
Q Consensus 352 ~~~~~~~W~e~~~~dGr~YYyN~~T~~StWekP~~ 386 (978)
...++++|+++.|+.| +||||+.|+.|+|++|..
T Consensus 17 ~~~LPpGW~~~~D~sG-tYY~h~~T~tTQWerP~~ 50 (55)
T 2e45_A 17 DSDLPAGWMRVQDTSG-TYYWHIPTGTTQWEPPGR 50 (55)
T ss_dssp CSCCCTTEEEEEETTE-EEEEETTTCCEESSCCCC
T ss_pred CCCCCCCCeEeecCCC-CEEEEcCCCCCccCCCCC
Confidence 3468999999999999 999999999999999964
No 70
>2djy_A SMAD ubiquitination regulatory factor 2; beta sheet, polyproline type II helix, PPII, ligase/signaling protein complex; NMR {Homo sapiens} PDB: 2lb1_A
Probab=98.16 E-value=1.6e-06 Score=68.23 Aligned_cols=33 Identities=18% Similarity=0.503 Sum_probs=30.0
Q ss_pred cCCCCCcEEEEcCCCceEEEeCCCCeeeccCChh
Q 002026 405 HLTGTDWALVTTNDGKKYYYNSKMKVSSWQIPSE 438 (978)
Q Consensus 405 ~l~~~~W~e~~t~dGr~YyyN~~T~~S~We~P~e 438 (978)
.|| .+|++..+.+|++||||..|++|+|+.|..
T Consensus 7 ~LP-~GWe~~~~~~G~~Yy~nh~t~~ttW~~Pr~ 39 (42)
T 2djy_A 7 PLP-PGWEIRNTATGRVYFVDHNNRTTQFTDPRL 39 (42)
T ss_dssp CCC-SSEEEEECSSSCEEEEETTTTEEESSCTTT
T ss_pred CCC-cCcEEEECCCCCEEEEECCCCCEeCCCCCC
Confidence 466 789999999999999999999999999974
No 71
>2dmv_A Itchy homolog E3 ubiquitin protein ligase; WW domain, three stranded antiparallel beta sheet, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.12 E-value=1.9e-06 Score=68.00 Aligned_cols=33 Identities=27% Similarity=0.616 Sum_probs=29.8
Q ss_pred cCCCCCcEEEEcCCCceEEEeCCCCeeeccCChh
Q 002026 405 HLTGTDWALVTTNDGKKYYYNSKMKVSSWQIPSE 438 (978)
Q Consensus 405 ~l~~~~W~e~~t~dGr~YyyN~~T~~S~We~P~e 438 (978)
.|| .+|++..+.+|++||||..|++|+|+.|..
T Consensus 7 ~LP-~GWe~~~d~~Gr~YY~n~~t~~T~We~P~~ 39 (43)
T 2dmv_A 7 GLP-PGWEQRVDQHGRVYYVDHVEKRTTWDRPSG 39 (43)
T ss_dssp SCC-TTEEEEECTTSCEEEEETTTCCEESSCSSS
T ss_pred CCC-CCceEEECCCCCEEEEECCCCCEecCCcCC
Confidence 455 689999999999999999999999999974
No 72
>2l5f_A PRE-mRNA-processing factor 40 homolog A; 2WW, HYPA, FBP11, protein binding; NMR {Homo sapiens}
Probab=98.11 E-value=5.4e-07 Score=82.48 Aligned_cols=34 Identities=38% Similarity=0.720 Sum_probs=31.3
Q ss_pred CCCCceEEEcCCCCeeeecCCCCceeccCCCCCC
Q 002026 355 QLDAWTAHKTDTGIVYYYNAVTGESTYEKPAGFK 388 (978)
Q Consensus 355 ~~~~W~e~~~~dGr~YYyN~~T~~StWekP~~l~ 388 (978)
+..+|+++.+++||+||||+.|++|+|++|.++.
T Consensus 53 ~~~~W~~~~~~~Gr~Yy~N~~T~~s~We~P~~~~ 86 (92)
T 2l5f_A 53 SKCPWKEYKSDSGKTYYYNSQTKESRWAKPKELE 86 (92)
T ss_dssp HSCSEEEEECTTCCEEEEETTTTEEESCCCHHHH
T ss_pred cccceEEEECCCCCEEEEECCCCCeeccCchhHh
Confidence 4578999999999999999999999999998765
No 73
>2ysg_A Syntaxin-binding protein 4; synip, STXBP4, WW domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.22.1.1
Probab=98.09 E-value=2.2e-06 Score=66.59 Aligned_cols=32 Identities=34% Similarity=0.631 Sum_probs=29.1
Q ss_pred cCCCCCcEEEEcCCCceEEEeCCCCeeeccCCh
Q 002026 405 HLTGTDWALVTTNDGKKYYYNSKMKVSSWQIPS 437 (978)
Q Consensus 405 ~l~~~~W~e~~t~dGr~YyyN~~T~~S~We~P~ 437 (978)
.|| .+|++..+.+|++||||..|++|+|+.|.
T Consensus 7 ~LP-~gWe~~~~~~Gr~Yy~nh~t~~ttW~~P~ 38 (40)
T 2ysg_A 7 GLP-YGWEEAYTADGIKYFINHVTQTTSWIHPV 38 (40)
T ss_dssp CCC-TTEEEEECSSSCEEEEESSSCCEECCCCC
T ss_pred CCC-CCcEEEEcCCCCEEEEECCCCcCcCCCCC
Confidence 355 78999999999999999999999999996
No 74
>1wmv_A WWOX, WW domain containing oxidoreductase; all-beta, apoptosis; NMR {Homo sapiens}
Probab=98.09 E-value=3.7e-06 Score=69.58 Aligned_cols=37 Identities=16% Similarity=0.385 Sum_probs=33.2
Q ss_pred ccCCCCCceEEEcCCCCeeeecCCCCceeccCCCCCC
Q 002026 352 VNEQLDAWTAHKTDTGIVYYYNAVTGESTYEKPAGFK 388 (978)
Q Consensus 352 ~~~~~~~W~e~~~~dGr~YYyN~~T~~StWekP~~l~ 388 (978)
...++.+|++..+++|++||||+.|+.|+|+.|....
T Consensus 9 ~~~LP~GWe~~~~~~G~~Yyinh~tk~TtwedPr~~~ 45 (54)
T 1wmv_A 9 AGDLPYGWEQETDENGQVFFVDHINKRTTYLDPRLAF 45 (54)
T ss_dssp SSCSCTTEEEEECTTSCEEEEESSSCCEESSCTTSSC
T ss_pred CCCCCcCcEEEECCCCCEEEEeCCCCCEeecCCCCcc
Confidence 3468999999999999999999999999999997643
No 75
>2jv4_A Peptidyl-prolyl CIS/trans isomerase; ppiase domain, WW domain group IV, rotamase; NMR {Emericella nidulans}
Probab=98.08 E-value=2e-06 Score=71.19 Aligned_cols=34 Identities=26% Similarity=0.706 Sum_probs=30.1
Q ss_pred cCCCCCcEEEEcC-CCceEEEeCCCCeeeccCChhH
Q 002026 405 HLTGTDWALVTTN-DGKKYYYNSKMKVSSWQIPSEV 439 (978)
Q Consensus 405 ~l~~~~W~e~~t~-dGr~YyyN~~T~~S~We~P~el 439 (978)
.|| .+|++..+. +|++||||..|++|+|++|.+.
T Consensus 7 ~LP-~GW~~~~~~~~Gr~YY~N~~T~~sqWe~P~~~ 41 (54)
T 2jv4_A 7 GLP-AGWEVRHSNSKNLPYYFNPATRESRWEPPADT 41 (54)
T ss_dssp CCC-SSCCEEECSSSSCEEEEETTTTEEESSCCTTS
T ss_pred CCC-CCcEEEEECCCCCEEEEECCCCcEEecCCCCc
Confidence 355 789999875 8999999999999999999874
No 76
>2kpz_A E3 ubiquitin-protein ligase NEDD4; WW domain, HTLV1, NEDD4, human modular domain, complex, HOST interaction, ligase; NMR {Homo sapiens} PDB: 2kq0_A 2laj_A*
Probab=98.08 E-value=2.4e-06 Score=69.32 Aligned_cols=33 Identities=18% Similarity=0.638 Sum_probs=30.2
Q ss_pred cCCCCCcEEEEcCCCceEEEeCCCCeeeccCChh
Q 002026 405 HLTGTDWALVTTNDGKKYYYNSKMKVSSWQIPSE 438 (978)
Q Consensus 405 ~l~~~~W~e~~t~dGr~YyyN~~T~~S~We~P~e 438 (978)
.|+ .+|++..+.+|++||||..|++|+|+.|..
T Consensus 12 ~LP-~gWe~~~~~~G~~Yy~nh~T~~ttWe~Pr~ 44 (49)
T 2kpz_A 12 FLP-KGWEVRHAPNGRPFFIDHNTKTTTWEDPRL 44 (49)
T ss_dssp CCC-TTEEEEECTTSCEEEEETTTTEEESSCTTC
T ss_pred CCC-CCcEEEECCCCCEEEEECCCCCEecCCCCC
Confidence 456 789999999999999999999999999975
No 77
>2ysf_A E3 ubiquitin-protein ligase itchy homolog; AIP4, NAPP1, WW domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.22.1.1
Probab=98.06 E-value=3e-06 Score=65.85 Aligned_cols=33 Identities=21% Similarity=0.493 Sum_probs=29.7
Q ss_pred cCCCCCcEEEEcCCCceEEEeCCCCeeeccCChh
Q 002026 405 HLTGTDWALVTTNDGKKYYYNSKMKVSSWQIPSE 438 (978)
Q Consensus 405 ~l~~~~W~e~~t~dGr~YyyN~~T~~S~We~P~e 438 (978)
.|| .+|++..+.+|++||||..|++|+|+.|..
T Consensus 7 ~LP-~gWe~~~~~~G~~Yy~nh~t~~ttw~~Pr~ 39 (40)
T 2ysf_A 7 GLP-EGWEMRFTVDGIPYFVDHNRRTTTYIDPRT 39 (40)
T ss_dssp CCC-SSEEEEECTTCCEEEEETTTCCEESSCTTT
T ss_pred CCC-cCcEEEEcCCCCEEEEECCCCcEecCCCCC
Confidence 456 789999999999999999999999999963
No 78
>2b7e_A PRE-mRNA processing protein PRP40; structural protein; NMR {Saccharomyces cerevisiae} SCOP: a.159.2.1
Probab=98.05 E-value=3.5e-06 Score=70.64 Aligned_cols=52 Identities=17% Similarity=0.291 Sum_probs=46.8
Q ss_pred HHHHHHHHHHHHhhhcCCCCCccHHHHHHHh-cCCchhccCCH--HHHHHHHHHHHH
Q 002026 643 KAAIEGFKQLLEEVSEDIDHSTDYQTFKKKW-GSDPRFEALDR--KDRELLLNERVL 696 (978)
Q Consensus 643 k~Ake~F~~LLee~~~~I~~~T~W~e~~kk~-~~DpRfkaLd~--~ERE~LF~EyI~ 696 (978)
++|.++|++||++. +|++..+|+.+.+.+ .+||||.+|.+ .+|+++|++|+.
T Consensus 3 eEae~aF~~lL~~~--~V~s~wsweqamr~i~i~DPrY~al~d~~~eRK~~Fe~Y~~ 57 (59)
T 2b7e_A 3 MEAEKEFITMLKEN--QVDSTWSFSRIISELGTRDPRYWMVDDDPLWKKEMFEKYLS 57 (59)
T ss_dssp THHHHHHHHHHHHT--TCCSSCCHHHHHHHHHHHCTHHHHSCCCHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHc--CCCCCCcHHHHHHHhccCCCccccccCCHHHHHHHHHHHHh
Confidence 35678999999986 599999999999999 89999999983 899999999975
No 79
>2ez5_W Dnedd4, E3 ubiquitin-protein ligase NEDD4; WW domain, PY motif, binding affinity, signalling protein,ligase; NMR {Drosophila melanogaster}
Probab=98.01 E-value=4.2e-06 Score=67.00 Aligned_cols=33 Identities=15% Similarity=0.616 Sum_probs=30.0
Q ss_pred cCCCCCcEEEEcCCCceEEEeCCCCeeeccCChh
Q 002026 405 HLTGTDWALVTTNDGKKYYYNSKMKVSSWQIPSE 438 (978)
Q Consensus 405 ~l~~~~W~e~~t~dGr~YyyN~~T~~S~We~P~e 438 (978)
.|+ .+|++..+.+|++||||..|++|+|+.|..
T Consensus 10 ~LP-~gWe~~~~~~Gr~Yyinh~t~~TtW~~Pr~ 42 (46)
T 2ez5_W 10 PLP-PRWSMQVAPNGRTFFIDHASRRTTWIDPRN 42 (46)
T ss_dssp CCC-TTEEEEECTTSSEEEEETTTTEEESBCTTT
T ss_pred CCC-cCcEEEEcCCCCEEEEECCCCCEeccCCCC
Confidence 355 789999999999999999999999999974
No 80
>2jx8_A Hpcif1, phosphorylated CTD-interacting factor 1; protein fragment, WW domain, triple-standed beta-sheet, alpha-helix, nucleus, phosphorylation; NMR {Homo sapiens}
Probab=97.97 E-value=3.1e-06 Score=69.54 Aligned_cols=33 Identities=21% Similarity=0.571 Sum_probs=29.1
Q ss_pred CCCCCcEEEEc-CCCceEEEeCCCCeeeccCChhH
Q 002026 406 LTGTDWALVTT-NDGKKYYYNSKMKVSSWQIPSEV 439 (978)
Q Consensus 406 l~~~~W~e~~t-~dGr~YyyN~~T~~S~We~P~el 439 (978)
|+ .+|+++++ .+|+.||||..|++|+|+.|.+.
T Consensus 11 LP-~gW~~~~~~~~gr~YY~N~~T~~SqWe~P~~~ 44 (52)
T 2jx8_A 11 VH-AGWEKCWSRRENRPYYFNRFTNQSLWEMPVLG 44 (52)
T ss_dssp HH-HTCCEEEETTTTEEEEEETTTTEEESSCCCCT
T ss_pred CC-cCcEEEEccccCCEEEEECCCCCEEeCCCCCC
Confidence 44 68999997 58999999999999999999763
No 81
>2l4j_A YES-associated protein 2 (YAP2); WW domain, medaka, transcription; NMR {Oryzias latipes}
Probab=97.97 E-value=5.7e-06 Score=66.25 Aligned_cols=33 Identities=36% Similarity=0.656 Sum_probs=29.8
Q ss_pred cCCCCCcEEEEcCCCceEEEeCCCCeeeccCChh
Q 002026 405 HLTGTDWALVTTNDGKKYYYNSKMKVSSWQIPSE 438 (978)
Q Consensus 405 ~l~~~~W~e~~t~dGr~YyyN~~T~~S~We~P~e 438 (978)
.|| .+|++..+.+|++||||..|++|+|+.|..
T Consensus 11 ~LP-~gWe~~~~~~G~~Yyinh~t~~TtWe~Pr~ 43 (46)
T 2l4j_A 11 PLP-EGWEQAITPEGEIYYINHKNKTTSWLDPRL 43 (46)
T ss_dssp CCC-TTCEEEECTTSCEEEEETTTTEEECSCCSS
T ss_pred CCC-cCceeEECCCCCEEEEECCCCCEeCCCCCc
Confidence 456 789999999999999999999999999963
No 82
>1i5h_W Rnedd4, ubiquitin ligase NEDD4; NEDD4, WW domains, ENAC, PY motif, liddle syndrome, proline-rich, ligase; NMR {Rattus norvegicus} SCOP: b.72.1.1 PDB: 1yiu_A 2jo9_A 2joc_A*
Probab=97.97 E-value=6.3e-06 Score=67.16 Aligned_cols=33 Identities=27% Similarity=0.654 Sum_probs=29.9
Q ss_pred cCCCCCcEEEEcCCCceEEEeCCCCeeeccCChh
Q 002026 405 HLTGTDWALVTTNDGKKYYYNSKMKVSSWQIPSE 438 (978)
Q Consensus 405 ~l~~~~W~e~~t~dGr~YyyN~~T~~S~We~P~e 438 (978)
.|| .+|++..+.+|++||||..|++|+|+.|..
T Consensus 11 ~LP-~gWe~~~~~~Gr~Yy~nh~t~~T~We~Pr~ 43 (50)
T 1i5h_W 11 PLP-PGWEERTHTDGRVFFINHNIKKTQWEDPRM 43 (50)
T ss_dssp SCS-TTEEEEECTTSCEEEEETTTTEEESSCTTT
T ss_pred CCC-cCcEEEEcCCCCEEEEECCCCCEEeeCCCC
Confidence 355 689999999999999999999999999975
No 83
>2ysb_A Salvador homolog 1 protein; WW domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: k.22.1.1
Probab=97.94 E-value=6e-06 Score=67.00 Aligned_cols=33 Identities=30% Similarity=0.676 Sum_probs=30.0
Q ss_pred cCCCCCcEEEEcCCCceEEEeCCCCeeeccCChh
Q 002026 405 HLTGTDWALVTTNDGKKYYYNSKMKVSSWQIPSE 438 (978)
Q Consensus 405 ~l~~~~W~e~~t~dGr~YyyN~~T~~S~We~P~e 438 (978)
+|| .+|++..+.+|++||||..|++|+|+.|..
T Consensus 11 ~LP-~gWe~~~~~~Gr~Yy~nh~t~~T~W~~P~~ 43 (49)
T 2ysb_A 11 PLP-PGWSVDWTMRGRKYYIDHNTNTTHWSHPLE 43 (49)
T ss_dssp CCC-TTEEEEECSSSCEEEEETTTTEEESSCTTT
T ss_pred CCC-CCceEEECCCCCEEEEEcCCCCEEecCCCC
Confidence 355 689999999999999999999999999985
No 84
>1o6w_A PRP40, PRE-mRNA processing protein PRP40; WW domain PAIR, nuclear protein, mRNA splicing, ribonucleoprotein; NMR {Saccharomyces cerevisiae} SCOP: b.72.1.1 b.72.1.1
Probab=97.94 E-value=4.6e-06 Score=73.21 Aligned_cols=33 Identities=42% Similarity=0.708 Sum_probs=30.4
Q ss_pred CCCCCceEEEcCCCCeeeecCCCCceeccCCCC
Q 002026 354 EQLDAWTAHKTDTGIVYYYNAVTGESTYEKPAG 386 (978)
Q Consensus 354 ~~~~~W~e~~~~dGr~YYyN~~T~~StWekP~~ 386 (978)
.++.+|+++.+++|++||||+.|++|+|++|..
T Consensus 40 ~lp~gW~~~~~~~Gr~Yy~n~~t~~t~W~~P~~ 72 (75)
T 1o6w_A 40 LRENGWKAAKTADGKVYYYNPTTRETSWTIPAF 72 (75)
T ss_dssp HHHHTCEEEECTTCCEEEEETTTTEEESSCCCC
T ss_pred CCCCeEEEEECCCCCEEEEECCCCCEECCCCCC
Confidence 356799999999999999999999999999975
No 85
>3l4h_A E3 ubiquitin-protein ligase HECW1; E3 ligase, WW domain, UBL-conjugation pathway, structural GE structural genomics consortium, SGC, coiled coil; HET: MSE; 1.80A {Homo sapiens}
Probab=97.93 E-value=9.4e-07 Score=82.82 Aligned_cols=59 Identities=14% Similarity=0.370 Sum_probs=50.5
Q ss_pred CCCCceEEEcCCCCeeeecCCCCceeccCCCCCCCCCCCCCCCCCCcccccCCCCCcEEEEcCCCceEEEeCCCCeeecc
Q 002026 355 QLDAWTAHKTDTGIVYYYNAVTGESTYEKPAGFKGEPDKVPVQPTPISMEHLTGTDWALVTTNDGKKYYYNSKMKVSSWQ 434 (978)
Q Consensus 355 ~~~~W~e~~~~dGr~YYyN~~T~~StWekP~~l~~~~e~~~~qp~P~~~~~l~~~~W~e~~t~dGr~YyyN~~T~~S~We 434 (978)
.+.+|+.+.++.|++||.|+.+.. . ..|| .+|++..+.+|++||.|..|++|+|+
T Consensus 46 ~p~~we~~~~~~~lV~~vn~~~d~------~------------------~pLP-~GWE~r~d~~Gr~YfIdH~tktTtW~ 100 (109)
T 3l4h_A 46 DARNFERYQHNRDLVNFINMFADT------R------------------LELP-RGWEIKTDQQGKSFFVDHNSRATTFI 100 (109)
T ss_dssp CTHHHHHHTTCHHHHHHHHTTCCT------T------------------SCCC-TTEEEEECTTCCEEEEETTTTEEESS
T ss_pred CCcChhhhcCcCCceEEeccCCCC------C------------------CCCC-CCCeEEECCCCCEEEEeCCCCCEeeC
Confidence 567899999999999999999731 0 1245 77999999999999999999999999
Q ss_pred CChh
Q 002026 435 IPSE 438 (978)
Q Consensus 435 ~P~e 438 (978)
.|..
T Consensus 101 dPRl 104 (109)
T 3l4h_A 101 DPRI 104 (109)
T ss_dssp CSCC
T ss_pred CCCc
Confidence 9964
No 86
>1jmq_A YAP65, 65 kDa YES-associated protein; polyproline ligand, YAP65 mutant, structural protein; NMR {Homo sapiens} SCOP: b.72.1.1 PDB: 1k9q_A* 1k9r_A 1k5r_A* 2lax_A* 2lay_A*
Probab=97.92 E-value=3.5e-06 Score=67.31 Aligned_cols=34 Identities=24% Similarity=0.477 Sum_probs=31.6
Q ss_pred cCCCCCceEEEcCCCCeeeecCCCCceeccCCCC
Q 002026 353 NEQLDAWTAHKTDTGIVYYYNAVTGESTYEKPAG 386 (978)
Q Consensus 353 ~~~~~~W~e~~~~dGr~YYyN~~T~~StWekP~~ 386 (978)
..++.||++..+++||.||+|++|++|+|+.|..
T Consensus 7 ~~LP~GWe~~~~~~gr~y~~n~~t~~t~W~dPr~ 40 (46)
T 1jmq_A 7 VPLPAGWEMAKTSSGQRYFKNHIDQTTTWQDPRK 40 (46)
T ss_dssp CCCCTTBCCBCCSSCCCBEEETTTTEEESSCTTT
T ss_pred CCCCcCcEEEEcCCCceEEEEecCCceeecCCCc
Confidence 4688999999999999999999999999999975
No 87
>2zaj_A Membrane-associated guanylate kinase, WW and PDZ domain-containing protein 1; BAI1-associated protein 1 (BAP-1); NMR {Homo sapiens}
Probab=97.91 E-value=6.7e-06 Score=66.75 Aligned_cols=33 Identities=18% Similarity=0.367 Sum_probs=29.5
Q ss_pred cCCCCCcEEEEcCCCceEEEeCCCCeeeccCChh
Q 002026 405 HLTGTDWALVTTNDGKKYYYNSKMKVSSWQIPSE 438 (978)
Q Consensus 405 ~l~~~~W~e~~t~dGr~YyyN~~T~~S~We~P~e 438 (978)
.|| .+|++..+.+|++||||..|++|+|+.|..
T Consensus 13 ~LP-~GWe~~~d~~Gr~YYvnh~t~~T~We~P~~ 45 (49)
T 2zaj_A 13 ELP-AGWEKIEDPVYGIYYVDHINRKTQYENPSG 45 (49)
T ss_dssp CCC-TTEEEEEETTTEEEEEETTTTEEESSCCCS
T ss_pred CCC-cCceEEEcCCCCEEEEeCCCCCEecCCCCC
Confidence 355 789999999999999999999999999963
No 88
>1tk7_A CG4244-PB; WW domain, notch, signaling protein; NMR {Drosophila melanogaster} SCOP: b.72.1.1 b.72.1.1
Probab=97.88 E-value=5.6e-06 Score=75.09 Aligned_cols=33 Identities=21% Similarity=0.432 Sum_probs=30.8
Q ss_pred cCCCCCceEEEcCCCCeeeecCCCCceeccCCC
Q 002026 353 NEQLDAWTAHKTDTGIVYYYNAVTGESTYEKPA 385 (978)
Q Consensus 353 ~~~~~~W~e~~~~dGr~YYyN~~T~~StWekP~ 385 (978)
..++.+|+++.+.+|++||||+.|++|+|++|.
T Consensus 55 ~~LP~gWe~~~~~~G~~Yy~nh~t~~ttw~~Pr 87 (88)
T 1tk7_A 55 GPLPPGWEIRYTAAGERFFVDHNTRRTTFEDPR 87 (88)
T ss_dssp CSSCSSCEEEEETTTEEEEEETTTTEEESSSSC
T ss_pred cccCCceEEEECCCCCEEEEECCCCcEeCCCCC
Confidence 467889999999999999999999999999995
No 89
>2kxq_A E3 ubiquitin-protein ligase smurf2; WW, smurf2, TGF-beta, modular binding, protein BIN; NMR {Homo sapiens} PDB: 2lb0_A* 2laz_A*
Probab=97.87 E-value=7.1e-06 Score=74.74 Aligned_cols=35 Identities=20% Similarity=0.426 Sum_probs=32.3
Q ss_pred ccCCCCCceEEEcCCCCeeeecCCCCceeccCCCC
Q 002026 352 VNEQLDAWTAHKTDTGIVYYYNAVTGESTYEKPAG 386 (978)
Q Consensus 352 ~~~~~~~W~e~~~~dGr~YYyN~~T~~StWekP~~ 386 (978)
...++.+|++..+.+|++||||+.|++|+|+.|..
T Consensus 53 ~~~LP~gWe~~~~~~G~~Yy~n~~t~~t~w~~Pr~ 87 (90)
T 2kxq_A 53 LGPLPPGWEIRNTATGRVYFVDHNNRTTQFTDPRL 87 (90)
T ss_dssp TCCCCSSCCEEECTTSCEEEEETTTTEEESSCTTT
T ss_pred ccccCCCceEEECCCCCEEEEECCCCcEecCCCCc
Confidence 35788999999999999999999999999999975
No 90
>2ho2_A Fe65 protein, amyloid beta A4 protein-binding family B member 1; WW domain, beta sheet, Fe65, protein binding; 1.33A {Homo sapiens} SCOP: b.72.1.1 PDB: 2idh_A* 2oei_A
Probab=97.82 E-value=1.4e-05 Score=61.43 Aligned_cols=31 Identities=26% Similarity=0.725 Sum_probs=28.0
Q ss_pred CCCCCcEEEEcCCCceEEEeCCCCeeeccCChh
Q 002026 406 LTGTDWALVTTNDGKKYYYNSKMKVSSWQIPSE 438 (978)
Q Consensus 406 l~~~~W~e~~t~dGr~YyyN~~T~~S~We~P~e 438 (978)
|| .+|++..+.+| +||||..|++|+|+.|..
T Consensus 4 LP-~GWe~~~d~~g-~YY~n~~t~~tqWe~P~~ 34 (38)
T 2ho2_A 4 LP-AGWMRVQDTSG-TYYWHIPTGTTQWEPPGR 34 (38)
T ss_dssp SC-TTEEEEECSSC-EEEEETTTTEEESSCCCC
T ss_pred CC-CCceEEEeCCC-CEEEecCCCCEeccCCCC
Confidence 55 67999999999 999999999999999963
No 91
>2jmf_A E3 ubiquitin-protein ligase suppressor of deltex; WW domain, solution, complex, ligase/signaling protein complex; NMR {Drosophila melanogaster} SCOP: b.72.1.1 PDB: 2op7_A
Probab=97.79 E-value=1.4e-05 Score=65.92 Aligned_cols=33 Identities=15% Similarity=0.527 Sum_probs=29.9
Q ss_pred cCCCCCcEEEEcCCCceEEEeCCCCeeeccCChh
Q 002026 405 HLTGTDWALVTTNDGKKYYYNSKMKVSSWQIPSE 438 (978)
Q Consensus 405 ~l~~~~W~e~~t~dGr~YyyN~~T~~S~We~P~e 438 (978)
.|+ .+|++..+.+|++||||..|++|+|+.|..
T Consensus 18 ~LP-~GWe~~~~~~Gr~Yyinh~tk~TtW~dPr~ 50 (53)
T 2jmf_A 18 PLP-PGWEIRYTAAGERFFVDHNTRRTTFEDPRP 50 (53)
T ss_dssp CCC-TTEEEEECTTSCEEEEETTTCCEESSCCCS
T ss_pred CCC-cCcEEEEcCCCCEEEEeCCCCcEecCCCCC
Confidence 456 789999999999999999999999999974
No 92
>2ysc_A Amyloid beta A4 precursor protein-binding family B member 3; Fe65-like protein 2, WW domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.72.1.1
Probab=97.79 E-value=1.6e-05 Score=61.51 Aligned_cols=31 Identities=26% Similarity=0.693 Sum_probs=27.5
Q ss_pred cCCCCCcEEEEcCCCceEEEeCCCCeeeccCCh
Q 002026 405 HLTGTDWALVTTNDGKKYYYNSKMKVSSWQIPS 437 (978)
Q Consensus 405 ~l~~~~W~e~~t~dGr~YyyN~~T~~S~We~P~ 437 (978)
.|| .+|++..+.+| .||||..|++|+|++|.
T Consensus 8 ~LP-~GWe~~~~~~G-~YY~n~~t~~tqWe~P~ 38 (39)
T 2ysc_A 8 GLP-PGWRKIHDAAG-TYYWHVPSGSTQWQRPT 38 (39)
T ss_dssp CCC-TTEEEEEETTE-EEEEESSSCCEESSCCC
T ss_pred CCC-CCcEEEEcCCC-CEEEEcCCCCEeccCCC
Confidence 456 78999999889 59999999999999984
No 93
>2ysd_A Membrane-associated guanylate kinase, WW and PDZ domain-containing protein 1; MAGI1, WW domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.22.1.1
Probab=97.75 E-value=1.8e-05 Score=66.14 Aligned_cols=33 Identities=27% Similarity=0.672 Sum_probs=30.1
Q ss_pred cCCCCCcEEEEcCCCceEEEeCCCCeeeccCChh
Q 002026 405 HLTGTDWALVTTNDGKKYYYNSKMKVSSWQIPSE 438 (978)
Q Consensus 405 ~l~~~~W~e~~t~dGr~YyyN~~T~~S~We~P~e 438 (978)
.|+ .+|++..+.+|++||||..|++|+|+.|..
T Consensus 14 ~LP-~GWe~~~~~~Gr~Yyinh~tk~TtWe~Pr~ 46 (57)
T 2ysd_A 14 PLP-ENWEMAYTENGEVYFIDHNTKTTSWLDPRC 46 (57)
T ss_dssp SCC-SSEEEEECSSCCEEEEETTTTEEESSCTTT
T ss_pred CCC-cCcEEEECCCCCEEEEECCCCcEecCCCCC
Confidence 355 789999999999999999999999999985
No 94
>2yse_A Membrane-associated guanylate kinase, WW and PDZ domain-containing protein 1; MAGI-1, WW domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=97.74 E-value=1.5e-05 Score=67.23 Aligned_cols=34 Identities=15% Similarity=0.287 Sum_probs=30.3
Q ss_pred cCCCCCcEEEEcCCCceEEEeCCCCeeeccCChhH
Q 002026 405 HLTGTDWALVTTNDGKKYYYNSKMKVSSWQIPSEV 439 (978)
Q Consensus 405 ~l~~~~W~e~~t~dGr~YyyN~~T~~S~We~P~el 439 (978)
.|| .+|++..+.+|++||||..|++|+|+.|..-
T Consensus 13 ~LP-~GWE~~~d~~Gr~YYvnh~tk~T~We~P~~~ 46 (60)
T 2yse_A 13 ELP-AGWEKIEDPVYGIYYVDHINRKTQYENPVLE 46 (60)
T ss_dssp SCC-SSEEEEECSSSCEEEEETTTTEEESSCHHHH
T ss_pred CCC-CCcEEEECCCCCEEEEeCCCCCeeccCCCch
Confidence 355 7899999999999999999999999999863
No 95
>1jmq_A YAP65, 65 kDa YES-associated protein; polyproline ligand, YAP65 mutant, structural protein; NMR {Homo sapiens} SCOP: b.72.1.1 PDB: 1k9q_A* 1k9r_A 1k5r_A* 2lax_A* 2lay_A*
Probab=97.65 E-value=1.9e-05 Score=63.01 Aligned_cols=32 Identities=28% Similarity=0.752 Sum_probs=29.5
Q ss_pred CCCCCcEEEEcCCCceEEEeCCCCeeeccCChh
Q 002026 406 LTGTDWALVTTNDGKKYYYNSKMKVSSWQIPSE 438 (978)
Q Consensus 406 l~~~~W~e~~t~dGr~YyyN~~T~~S~We~P~e 438 (978)
|| .+|+++.+.+||+||+|..|++|+|++|..
T Consensus 9 LP-~GWe~~~~~~gr~y~~n~~t~~t~W~dPr~ 40 (46)
T 1jmq_A 9 LP-AGWEMAKTSSGQRYFKNHIDQTTTWQDPRK 40 (46)
T ss_dssp CC-TTBCCBCCSSCCCBEEETTTTEEESSCTTT
T ss_pred CC-cCcEEEEcCCCceEEEEecCCceeecCCCc
Confidence 55 789999899999999999999999999975
No 96
>1wmv_A WWOX, WW domain containing oxidoreductase; all-beta, apoptosis; NMR {Homo sapiens}
Probab=97.64 E-value=3.6e-05 Score=63.70 Aligned_cols=33 Identities=18% Similarity=0.402 Sum_probs=29.9
Q ss_pred cCCCCCcEEEEcCCCceEEEeCCCCeeeccCChh
Q 002026 405 HLTGTDWALVTTNDGKKYYYNSKMKVSSWQIPSE 438 (978)
Q Consensus 405 ~l~~~~W~e~~t~dGr~YyyN~~T~~S~We~P~e 438 (978)
.|| .+|++..+.+|++||+|..|++|+|+.|..
T Consensus 11 ~LP-~GWe~~~~~~G~~Yyinh~tk~TtwedPr~ 43 (54)
T 1wmv_A 11 DLP-YGWEQETDENGQVFFVDHINKRTTYLDPRL 43 (54)
T ss_dssp CSC-TTEEEEECTTSCEEEEESSSCCEESSCTTS
T ss_pred CCC-cCcEEEECCCCCEEEEeCCCCCEeecCCCC
Confidence 355 789999999999999999999999999975
No 97
>3tc5_A Peptidyl-prolyl CIS-trans isomerase NIMA-interact; PIN1 mutant (R14A), oncogenic transformation, small molecule cycle, rotamase, phosphoprotein; HET: 3T5 P6G; 1.40A {Homo sapiens} PDB: 2itk_A* 2q5a_A* 2xp3_A* 2xp4_A* 2xp5_A* 2xp7_A* 2xp8_A* 2xp9_A* 2xpa_A* 2xpb_A* 3kab_A* 3kag_A* 3kah_A* 3kai_A* 3kce_A* 3ntp_A* 3odk_A* 3oob_A* 2zr6_A* 1f8a_B* ...
Probab=97.43 E-value=6.5e-05 Score=75.82 Aligned_cols=35 Identities=31% Similarity=0.708 Sum_probs=28.8
Q ss_pred cCCCCCceEEEcC-CCCeeeecCCCCceeccCCCCC
Q 002026 353 NEQLDAWTAHKTD-TGIVYYYNAVTGESTYEKPAGF 387 (978)
Q Consensus 353 ~~~~~~W~e~~~~-dGr~YYyN~~T~~StWekP~~l 387 (978)
..++.+|+++.++ .|++||||+.|++|+|++|...
T Consensus 8 ~~LP~gWe~~~~~~~g~~yy~n~~t~~t~We~P~~~ 43 (166)
T 3tc5_A 8 EKLPPGWEKAMSRSSGRVYYFNHITNASQWERPSGN 43 (166)
T ss_dssp --CCTTEEEEECTTTCCEEEEETTTCCEESSCC---
T ss_pred CCCCCCceEEEcCCCCCEEEEECCCCCEEecCCCCC
Confidence 3588999999995 9999999999999999999753
No 98
>2e45_A Fe65 protein, amyloid beta A4 precursor protein-binding family B member 1; triple-stranded beta-sheet; NMR {Homo sapiens} SCOP: b.72.1.1
Probab=97.29 E-value=0.00015 Score=59.65 Aligned_cols=31 Identities=26% Similarity=0.725 Sum_probs=28.3
Q ss_pred cCCCCCcEEEEcCCCceEEEeCCCCeeeccCCh
Q 002026 405 HLTGTDWALVTTNDGKKYYYNSKMKVSSWQIPS 437 (978)
Q Consensus 405 ~l~~~~W~e~~t~dGr~YyyN~~T~~S~We~P~ 437 (978)
.|| .+|+++.+..| .||||..|++++|+.|.
T Consensus 19 ~LP-pGW~~~~D~sG-tYY~h~~T~tTQWerP~ 49 (55)
T 2e45_A 19 DLP-AGWMRVQDTSG-TYYWHIPTGTTQWEPPG 49 (55)
T ss_dssp CCC-TTEEEEEETTE-EEEEETTTCCEESSCCC
T ss_pred CCC-CCCeEeecCCC-CEEEEcCCCCCccCCCC
Confidence 356 78999999999 99999999999999995
No 99
>3l4h_A E3 ubiquitin-protein ligase HECW1; E3 ligase, WW domain, UBL-conjugation pathway, structural GE structural genomics consortium, SGC, coiled coil; HET: MSE; 1.80A {Homo sapiens}
Probab=97.29 E-value=0.00013 Score=68.37 Aligned_cols=35 Identities=14% Similarity=0.302 Sum_probs=32.4
Q ss_pred ccCCCCCceEEEcCCCCeeeecCCCCceeccCCCC
Q 002026 352 VNEQLDAWTAHKTDTGIVYYYNAVTGESTYEKPAG 386 (978)
Q Consensus 352 ~~~~~~~W~e~~~~dGr~YYyN~~T~~StWekP~~ 386 (978)
...++.||++..+++|++||.|+.|+.|||+.|..
T Consensus 70 ~~pLP~GWE~r~d~~Gr~YfIdH~tktTtW~dPRl 104 (109)
T 3l4h_A 70 RLELPRGWEIKTDQQGKSFFVDHNSRATTFIDPRI 104 (109)
T ss_dssp TSCCCTTEEEEECTTCCEEEEETTTTEEESSCSCC
T ss_pred CCCCCCCCeEEECCCCCEEEEeCCCCCEeeCCCCc
Confidence 44789999999999999999999999999999975
No 100
>3tc5_A Peptidyl-prolyl CIS-trans isomerase NIMA-interact; PIN1 mutant (R14A), oncogenic transformation, small molecule cycle, rotamase, phosphoprotein; HET: 3T5 P6G; 1.40A {Homo sapiens} PDB: 2itk_A* 2q5a_A* 2xp3_A* 2xp4_A* 2xp5_A* 2xp7_A* 2xp8_A* 2xp9_A* 2xpa_A* 2xpb_A* 3kab_A* 3kag_A* 3kah_A* 3kai_A* 3kce_A* 3ntp_A* 3odk_A* 3oob_A* 2zr6_A* 1f8a_B* ...
Probab=96.70 E-value=0.00093 Score=67.37 Aligned_cols=34 Identities=29% Similarity=0.708 Sum_probs=27.9
Q ss_pred cCCCCCcEEEEc-CCCceEEEeCCCCeeeccCChhH
Q 002026 405 HLTGTDWALVTT-NDGKKYYYNSKMKVSSWQIPSEV 439 (978)
Q Consensus 405 ~l~~~~W~e~~t-~dGr~YyyN~~T~~S~We~P~el 439 (978)
.|| .+|++..+ ..|++||||..|++|+|+.|..-
T Consensus 9 ~LP-~gWe~~~~~~~g~~yy~n~~t~~t~We~P~~~ 43 (166)
T 3tc5_A 9 KLP-PGWEKAMSRSSGRVYYFNHITNASQWERPSGN 43 (166)
T ss_dssp -CC-TTEEEEECTTTCCEEEEETTTCCEESSCC---
T ss_pred CCC-CCceEEEcCCCCCEEEEECCCCCEEecCCCCC
Confidence 355 78999998 69999999999999999999753
No 101
>1eg3_A Dystrophin; EF-hand like domain, WW domain, structural protein; 2.00A {Homo sapiens} SCOP: a.39.1.7 a.39.1.7 b.72.1.1 PDB: 1eg4_A
Probab=96.37 E-value=0.0013 Score=70.80 Aligned_cols=33 Identities=18% Similarity=0.436 Sum_probs=31.1
Q ss_pred cCCCCCceEEEcCCCCeeeecCCCCceeccCCC
Q 002026 353 NEQLDAWTAHKTDTGIVYYYNAVTGESTYEKPA 385 (978)
Q Consensus 353 ~~~~~~W~e~~~~dGr~YYyN~~T~~StWekP~ 385 (978)
.+++++|++..+++|++||.|+.|+.|+|+.|.
T Consensus 10 ~~l~~~we~~~~~~~~~y~~~h~~~tt~w~~p~ 42 (261)
T 1eg3_A 10 TSVQGPWERAISPNKVPYYINHETQTTCWDHPK 42 (261)
T ss_dssp TTCCTTEEEEECTTSCEEEEETTTTEEESSCHH
T ss_pred CCCCCCcceeECCCCCeEeecCCcccccCCCCc
Confidence 478889999999999999999999999999986
No 102
>2kfd_A PRE-mRNA-processing protein PRP40; FF domain, mRNA splicing, nucleus, phosphoprotein, ribonucleoprotein, nuclear protein; NMR {Saccharomyces cerevisiae}
Probab=96.10 E-value=0.0085 Score=51.01 Aligned_cols=60 Identities=22% Similarity=0.342 Sum_probs=49.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhhhhccCCccccCHHHHHHhcCCCcccCCCCh--hHHHHHHHHHH
Q 002026 868 IKTLYERCAHDFRGLLAEVITAEAAAQETEDGKTVLNSWSTAKRVLKPEPRYSKMPR--KEREALWRRHA 935 (978)
Q Consensus 868 I~~L~ek~r~dFr~LL~E~~~~~~~~~~~~d~~t~~~sW~e~kk~Lk~D~RY~~l~~--~eRe~lf~~~i 935 (978)
..++.|++++.|.-||..+... .+++..+.|+++++.|++-+.|+.|.. +.++.||++|.
T Consensus 6 e~r~lEqKK~yF~llL~Rvy~~--------~~k~kPe~WE~A~~~I~~~~Ey~~l~~E~~v~~qif~~F~ 67 (69)
T 2kfd_A 6 ERRILEQKKHYFWLLLQRTYTK--------TGKPKPSTWDLASKELGESLEYKALGDEDNIRRQIFEDFK 67 (69)
T ss_dssp HHHHHHHHHHHHHHHHHHHSCS--------SSSCCCSSHHHHHHHHTTSTTSGGGTTSHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHHHHHHHcc--------cCCCCCccHHHHHHHHccCHHHHHhhccHHHHHHHHHhcC
Confidence 4567789999999999998532 246667799999999999999999965 46899999874
No 103
>2kfd_A PRE-mRNA-processing protein PRP40; FF domain, mRNA splicing, nucleus, phosphoprotein, ribonucleoprotein, nuclear protein; NMR {Saccharomyces cerevisiae}
Probab=95.78 E-value=0.013 Score=49.92 Aligned_cols=53 Identities=23% Similarity=0.355 Sum_probs=43.6
Q ss_pred HHHHHHHHHHHHHhc--CC-CCC-CchHhhhcccccCchhhcccCh-HHHHHHHHHHH
Q 002026 575 KEECIIKFKEMLKER--GV-APF-SKWEKELPKIVFDPRFKAIQSQ-SARRALFERYV 627 (978)
Q Consensus 575 kEEak~aFkeLLkE~--~V-~~~-stWekal~kI~~DPRY~aL~s~-~ERKqlFeeYi 627 (978)
.|+.+.-|+-||... ++ ++. .+||.+++.|.+-|.|++|.+. .-+|+||++|.
T Consensus 10 lEqKK~yF~llL~Rvy~~~~k~kPe~WE~A~~~I~~~~Ey~~l~~E~~v~~qif~~F~ 67 (69)
T 2kfd_A 10 LEQKKHYFWLLLQRTYTKTGKPKPSTWDLASKELGESLEYKALGDEDNIRRQIFEDFK 67 (69)
T ss_dssp HHHHHHHHHHHHHHHSCSSSSCCCSSHHHHHHHHTTSTTSGGGTTSHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHHHcccCCCCCccHHHHHHHHccCHHHHHhhccHHHHHHHHHhcC
Confidence 466788899999885 23 444 4999999999999999999655 89999999984
No 104
>2k85_A Glucocorticoid receptor DNA-binding factor 1; FF domain, P190-A rhogap, protein phosphorylation, alternative splicing, anti-oncogene, cell cycle; NMR {Homo sapiens}
Probab=95.66 E-value=0.02 Score=49.19 Aligned_cols=57 Identities=16% Similarity=0.372 Sum_probs=48.4
Q ss_pred HHHHHHHHHHHHHhhhcCCCCCccHHHHHHHhcCCchhcc---C-CHHHHHHHHHHHHHHhhH
Q 002026 642 QKAAIEGFKQLLEEVSEDIDHSTDYQTFKKKWGSDPRFEA---L-DRKDRELLLNERVLPLKR 700 (978)
Q Consensus 642 ~k~Ake~F~~LLee~~~~I~~~T~W~e~~kk~~~DpRfka---L-d~~ERE~LF~EyI~~LKk 700 (978)
...|.+.|..|+...+ .+++..|..+.++|...|+|.. | +....++||+.||.+|+.
T Consensus 8 l~satd~~e~LIr~~V--td~~~~W~~~skkL~~~pE~~~yv~L~G~~kaqrlF~rHi~kLk~ 68 (69)
T 2k85_A 8 IATAKDKYEWLVSRIV--KNHNENWLSVSRKMQASPEYQDYVYLEGTQKAKKLFLQHIHRLKH 68 (69)
T ss_dssp TTHHHHHHHHHHHHHC--SSSCSCHHHHHHHHTTSHHHHHHHHHTCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHH--hhHHHHhHHHHHHHhcCccHHHHHHHhChHHHHHHHHHHHHHhhc
Confidence 4568899999997764 5788999999999999999985 4 457888999999999875
No 105
>3olm_A E3 ubiquitin-protein ligase RSP5; ligase; 2.50A {Saccharomyces cerevisiae}
Probab=95.35 E-value=0.0052 Score=70.72 Aligned_cols=35 Identities=23% Similarity=0.435 Sum_probs=32.3
Q ss_pred ccCCCCCceEEEcCCCCeeeecCCCCceeccCCCC
Q 002026 352 VNEQLDAWTAHKTDTGIVYYYNAVTGESTYEKPAG 386 (978)
Q Consensus 352 ~~~~~~~W~e~~~~dGr~YYyN~~T~~StWekP~~ 386 (978)
...++++|++..+++|++||.|+.|+.|||+.|..
T Consensus 6 ~~~lP~gWe~~~~~~g~~y~i~h~~~~t~w~~Pr~ 40 (429)
T 3olm_A 6 LGPLPSGWEMRLTNTARVYFVDHNTKTTTWDDPRL 40 (429)
T ss_dssp CCCCCTTCCCCCSSCCCCCEEETTTTEEESSCTTS
T ss_pred CCCCCCCceeEECCCCCeEEEeCCCcceeccCCCC
Confidence 45689999999999999999999999999999975
No 106
>1eg3_A Dystrophin; EF-hand like domain, WW domain, structural protein; 2.00A {Homo sapiens} SCOP: a.39.1.7 a.39.1.7 b.72.1.1 PDB: 1eg4_A
Probab=94.90 E-value=0.013 Score=63.05 Aligned_cols=35 Identities=17% Similarity=0.490 Sum_probs=31.0
Q ss_pred cCCCCCcEEEEcCCCceEEEeCCCCeeeccCChhHH
Q 002026 405 HLTGTDWALVTTNDGKKYYYNSKMKVSSWQIPSEVT 440 (978)
Q Consensus 405 ~l~~~~W~e~~t~dGr~YyyN~~T~~S~We~P~el~ 440 (978)
++| .+|++-.|.+|++||.|+.|++|+|+.|.-..
T Consensus 11 ~l~-~~we~~~~~~~~~y~~~h~~~tt~w~~p~~~~ 45 (261)
T 1eg3_A 11 SVQ-GPWERAISPNKVPYYINHETQTTCWDHPKMTE 45 (261)
T ss_dssp TCC-TTEEEEECTTSCEEEEETTTTEEESSCHHHHH
T ss_pred CCC-CCcceeECCCCCeEeecCCcccccCCCCchhh
Confidence 345 68999999999999999999999999998644
No 107
>2k85_A Glucocorticoid receptor DNA-binding factor 1; FF domain, P190-A rhogap, protein phosphorylation, alternative splicing, anti-oncogene, cell cycle; NMR {Homo sapiens}
Probab=94.10 E-value=0.059 Score=46.30 Aligned_cols=57 Identities=23% Similarity=0.435 Sum_probs=45.5
Q ss_pred HHHHHHHHHHHhhcCCCCChhHHHhhhhcCcccccccCCCC-hHHHHHHHHHHHHHHHH
Q 002026 816 AVTSFQALLVETIKDPQASWTESRPKLEKDPQGRATNADLD-SSDREKLFREHIKTLYE 873 (978)
Q Consensus 816 ar~~F~aLL~E~v~~p~ssW~Eik~~L~kDpr~ra~~~~Ls-~~dre~LF~dhI~~L~e 873 (978)
+.+.|..|....|.|....|.-+..+|...+.|... ..|. -....+||..||+.|++
T Consensus 11 atd~~e~LIr~~Vtd~~~~W~~~skkL~~~pE~~~y-v~L~G~~kaqrlF~rHi~kLk~ 68 (69)
T 2k85_A 11 AKDKYEWLVSRIVKNHNENWLSVSRKMQASPEYQDY-VYLEGTQKAKKLFLQHIHRLKH 68 (69)
T ss_dssp HHHHHHHHHHHHCSSSCSCHHHHHHHHTTSHHHHHH-HHHTCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhhHHHHhHHHHHHHhcCccHHHH-HHHhChHHHHHHHHHHHHHhhc
Confidence 456799997788999999999999999999987642 1232 34568999999999964
No 108
>1yw5_A Peptidyl prolyl CIS/trans isomerase; WW-domain, ppiase domain, ordered linker; 1.60A {Candida albicans}
Probab=93.88 E-value=0.039 Score=55.84 Aligned_cols=34 Identities=26% Similarity=0.499 Sum_probs=30.5
Q ss_pred cCCCCCceEEEcC-CCCeeeecCCCCceeccCCCC
Q 002026 353 NEQLDAWTAHKTD-TGIVYYYNAVTGESTYEKPAG 386 (978)
Q Consensus 353 ~~~~~~W~e~~~~-dGr~YYyN~~T~~StWekP~~ 386 (978)
..++++|+...+. .|+.||||.+|++++|++|..
T Consensus 6 ~~lp~~w~~~~s~s~~~~Yy~~~~~~~~~~~~~~~ 40 (177)
T 1yw5_A 6 TGLPPNWTIRVSRSHNKEYFLNQSTNESSWDPPYG 40 (177)
T ss_dssp CCCCTTEEEEECSSTTCEEEEETTTCCEESSCCTT
T ss_pred CCCCchHHHHhcccCCchhhhhHHHhhHhhcCccc
Confidence 4588999999886 699999999999999999875
No 109
>3olm_A E3 ubiquitin-protein ligase RSP5; ligase; 2.50A {Saccharomyces cerevisiae}
Probab=92.32 E-value=0.041 Score=63.31 Aligned_cols=33 Identities=24% Similarity=0.629 Sum_probs=29.6
Q ss_pred cCCCCCcEEEEcCCCceEEEeCCCCeeeccCChh
Q 002026 405 HLTGTDWALVTTNDGKKYYYNSKMKVSSWQIPSE 438 (978)
Q Consensus 405 ~l~~~~W~e~~t~dGr~YyyN~~T~~S~We~P~e 438 (978)
++| .+|+...|.+|++||.|+.|++|+|+.|+.
T Consensus 8 ~lP-~gWe~~~~~~g~~y~i~h~~~~t~w~~Pr~ 40 (429)
T 3olm_A 8 PLP-SGWEMRLTNTARVYFVDHNTKTTTWDDPRL 40 (429)
T ss_dssp CCC-TTCCCCCSSCCCCCEEETTTTEEESSCTTS
T ss_pred CCC-CCceeEECCCCCeEEEeCCCcceeccCCCC
Confidence 355 679998899999999999999999999975
No 110
>1yw5_A Peptidyl prolyl CIS/trans isomerase; WW-domain, ppiase domain, ordered linker; 1.60A {Candida albicans}
Probab=89.09 E-value=0.24 Score=50.07 Aligned_cols=34 Identities=26% Similarity=0.654 Sum_probs=29.2
Q ss_pred CCCCCcEEEEc-CCCceEEEeCCCCeeeccCChhHH
Q 002026 406 LTGTDWALVTT-NDGKKYYYNSKMKVSSWQIPSEVT 440 (978)
Q Consensus 406 l~~~~W~e~~t-~dGr~YyyN~~T~~S~We~P~el~ 440 (978)
|| .+|+.... ..|+.||||..|++++|+.|..+.
T Consensus 8 lp-~~w~~~~s~s~~~~Yy~~~~~~~~~~~~~~~vs 42 (177)
T 1yw5_A 8 LP-PNWTIRVSRSHNKEYFLNQSTNESSWDPPYGTD 42 (177)
T ss_dssp CC-TTEEEEECSSTTCEEEEETTTCCEESSCCTTCC
T ss_pred CC-chHHHHhcccCCchhhhhHHHhhHhhcCcccCC
Confidence 55 78998765 589999999999999999998754
No 111
>3le4_A Microprocessor complex subunit DGCR8; WW motif, dimerization, 3D domain swapping, heme binding, MI processing, heme, iron, metal-binding, nucleus; 1.70A {Homo sapiens}
Probab=80.09 E-value=1.8 Score=37.70 Aligned_cols=35 Identities=23% Similarity=0.515 Sum_probs=31.3
Q ss_pred cCCCCCcEEEEcCCCceEEEeCCCCeeeccCChhHH
Q 002026 405 HLTGTDWALVTTNDGKKYYYNSKMKVSSWQIPSEVT 440 (978)
Q Consensus 405 ~l~~~~W~e~~t~dGr~YyyN~~T~~S~We~P~el~ 440 (978)
.+| .+|..++-..|-.-|++..|+..+|.+|=.|-
T Consensus 28 ~LP-eGW~~v~H~SGmP~YlH~~trV~T~SrPY~lG 62 (79)
T 3le4_A 28 PLP-DGWIMTFHNSGVPVYLHRESRVVTWSRPYFLG 62 (79)
T ss_dssp CCC-TTEEEEECTTSSEEEEETTTTEEESSCCCCCT
T ss_pred cCC-CccEEEEecCCceEEEeccceEEeccCCeEec
Confidence 355 78999999999999999999999999998753
No 112
>3le4_A Microprocessor complex subunit DGCR8; WW motif, dimerization, 3D domain swapping, heme binding, MI processing, heme, iron, metal-binding, nucleus; 1.70A {Homo sapiens}
Probab=75.25 E-value=2.7 Score=36.57 Aligned_cols=40 Identities=15% Similarity=0.297 Sum_probs=35.6
Q ss_pred ccccCCCCCceEEEcCCCCeeeecCCCCceeccCCCCCCC
Q 002026 350 ASVNEQLDAWTAHKTDTGIVYYYNAVTGESTYEKPAGFKG 389 (978)
Q Consensus 350 ~a~~~~~~~W~e~~~~dGr~YYyN~~T~~StWekP~~l~~ 389 (978)
+-...++.+|....-..|-.-||+..|+.-||.||-.+..
T Consensus 24 ~~~~~LPeGW~~v~H~SGmP~YlH~~trV~T~SrPY~lG~ 63 (79)
T 3le4_A 24 PPTEPLPDGWIMTFHNSGVPVYLHRESRVVTWSRPYFLGT 63 (79)
T ss_dssp CCCCCCCTTEEEEECTTSSEEEEETTTTEEESSCCCCCTT
T ss_pred CcCCcCCCccEEEEecCCceEEEeccceEEeccCCeEecC
Confidence 3456789999999999999999999999999999987743
No 113
>2v8f_C MDIA1, profilin IIA; alternative splicing, protein-binding, cytoplasm, acetylation, cytoskeleton, actin-binding; 1.1A {Mus musculus}
Probab=72.62 E-value=2.5 Score=29.18 Aligned_cols=17 Identities=29% Similarity=0.585 Sum_probs=8.7
Q ss_pred CCCCCCCCCCCCCCCCC
Q 002026 178 STPPGLFVTPQTQAPPG 194 (978)
Q Consensus 178 ~~~p~~~~~~~~p~~~~ 194 (978)
|+.||+.|.+.+|..||
T Consensus 5 PplPg~~giPpPpplPg 21 (26)
T 2v8f_C 5 PPLPGVASIPPPPPLPG 21 (26)
T ss_pred CCCCCCCCCCCCCCCCC
Confidence 44455555554444444
No 114
>4gyx_A Type III collagen fragment in A HOST peptide STAB the cysteine knot; collagen triple helix, type III collagen cysteine knot, BLOO clotting; 1.49A {Homo sapiens}
Probab=68.54 E-value=4.7 Score=28.45 Aligned_cols=14 Identities=43% Similarity=0.973 Sum_probs=8.4
Q ss_pred CCCCCCCCCCCCCC
Q 002026 181 PGLFVTPQTQAPPG 194 (978)
Q Consensus 181 p~~~~~~~~p~~~~ 194 (978)
||+-|-||+|||||
T Consensus 12 pgvmgfpgppgppg 25 (31)
T 4gyx_A 12 PGVMGFPGPPGPPG 25 (31)
T ss_dssp CCCCCCCCCCCCCC
T ss_pred CccccCCCCCCCCC
Confidence 55555566666665
No 115
>3vkg_A Dynein heavy chain, cytoplasmic; AAA+ protein, molecular motor, microtubles, motor protein; HET: ADP SPM; 2.81A {Dictyostelium discoideum} PDB: 3vkh_A*
Probab=38.42 E-value=8.1e+02 Score=35.18 Aligned_cols=44 Identities=16% Similarity=0.184 Sum_probs=27.2
Q ss_pred CCCChhHHHhhhhcCcc-----------cccccCCCChHHHHHHHHHHHHHHHHH
Q 002026 831 PQASWTESRPKLEKDPQ-----------GRATNADLDSSDREKLFREHIKTLYER 874 (978)
Q Consensus 831 p~ssW~Eik~~L~kDpr-----------~ra~~~~Ls~~dre~LF~dhI~~L~ek 874 (978)
....|.+....|...-. |.+-...++..-|..++.+++..|.+.
T Consensus 2085 Ek~RW~~~~~~l~~~~~~L~GD~LLaaafisY~G~f~~~~R~~l~~~W~~~l~~~ 2139 (3245)
T 3vkg_A 2085 ERGRWEQQSENFNTQMSTVVGDVVLASAFLAYIGFFDQNFRTDLMRKWMIRLDSV 2139 (3245)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTGGGSCHHHHHHHHHHHHHHHHHH
T ss_pred ccccHHHHHHHHHHHHHhccHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHhc
Confidence 34578877766654321 111123456778888988888888654
No 116
>3obv_E Protein diaphanous homolog 1; autoinhibition, actin, nucleation, cytoskeleton, structural; HET: SUC; 2.75A {Mus musculus} PDB: 3o4x_E 2bap_D
Probab=38.23 E-value=3.5e+02 Score=31.00 Aligned_cols=38 Identities=16% Similarity=0.226 Sum_probs=26.2
Q ss_pred ChHHHHHHhccCchhhcCCcccHHHHHHHHHHHHHHHHHH
Q 002026 732 RWSKVKDILRDDPRYKSVRHEDREVIFNEYVRELKAAEEE 771 (978)
Q Consensus 732 ~Wsdvk~~L~~DpRy~aL~~~dRe~lFeeyI~eLe~~e~e 771 (978)
.+.++...|..|+. .+...+--.+|.+|+..+++..++
T Consensus 345 ~~~~l~~yFgedp~--~~~~~eFF~~~~~F~~~fkkA~~e 382 (457)
T 3obv_E 345 LYKELGDYFVFDPK--KLSVEEFFMDLHNFRNMFLQAVKE 382 (457)
T ss_dssp HHHHHHHHTTCCTT--TSCHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhCCCCC--CCCHHHHHHHHHHHHHHHHHHHHH
Confidence 46667777777774 344456677888888888876554
No 117
>1v9d_A Diaphanous protein homolog 1; helix bundle, protein binding; 2.60A {Mus musculus} SCOP: a.207.1.1
Probab=37.29 E-value=2.5e+02 Score=30.67 Aligned_cols=38 Identities=16% Similarity=0.226 Sum_probs=24.4
Q ss_pred ChHHHHHHhccCchhhcCCcccHHHHHHHHHHHHHHHHHH
Q 002026 732 RWSKVKDILRDDPRYKSVRHEDREVIFNEYVRELKAAEEE 771 (978)
Q Consensus 732 ~Wsdvk~~L~~DpRy~aL~~~dRe~lFeeyI~eLe~~e~e 771 (978)
.+.++...|..||. .+...+--.+|.+|+..+++..++
T Consensus 274 ~~~~l~~yfged~~--~~~~~~fF~~~~~F~~~f~~a~~e 311 (340)
T 1v9d_A 274 LYKELGDYFVFDPK--KLSVEEFFMDLHNFRNMFLQAVKE 311 (340)
T ss_dssp HHHHHHHHTTCCTT--TSCHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhCCCCC--CCCHHHHHHHHHHHHHHHHHHHHH
Confidence 45566667777764 234445566778888888776544
No 118
>2v8f_C MDIA1, profilin IIA; alternative splicing, protein-binding, cytoplasm, acetylation, cytoskeleton, actin-binding; 1.1A {Mus musculus}
Probab=36.68 E-value=23 Score=24.52 Aligned_cols=7 Identities=43% Similarity=0.505 Sum_probs=2.6
Q ss_pred CCCCCCC
Q 002026 179 TPPGLFV 185 (978)
Q Consensus 179 ~~p~~~~ 185 (978)
+||-++|
T Consensus 3 PPPplPg 9 (26)
T 2v8f_C 3 PPPPLPG 9 (26)
T ss_pred CCCCCCC
Confidence 3333333
No 119
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=34.95 E-value=36 Score=36.42 Aligned_cols=61 Identities=13% Similarity=0.067 Sum_probs=41.4
Q ss_pred cCCCCeeeecCCCCceeccCCCCCCCCCCCCCCCCCCcccccCCCCCcEEEEcCCCceEEEeCCCCeeeccC
Q 002026 364 TDTGIVYYYNAVTGESTYEKPAGFKGEPDKVPVQPTPISMEHLTGTDWALVTTNDGKKYYYNSKMKVSSWQI 435 (978)
Q Consensus 364 ~~dGr~YYyN~~T~~StWekP~~l~~~~e~~~~qp~P~~~~~l~~~~W~e~~t~dGr~YyyN~~T~~S~We~ 435 (978)
+.+|.+|.||..|++..|..+...... ...|+ +. .+-.-+.+.+|.+|.||..|++..|..
T Consensus 284 ~~~g~l~~~d~~tG~~~w~~~~~~~~~------~~~~~----~~-~~~l~v~~~~g~l~~~d~~tG~~~~~~ 344 (376)
T 3q7m_A 284 DQNDRVMALTIDGGVTLWTQSDLLHRL------LTSPV----LY-NGNLVVGDSEGYLHWINVEDGRFVAQQ 344 (376)
T ss_dssp ETTCCEEEEETTTCCEEEEECTTTTSC------CCCCE----EE-TTEEEEECTTSEEEEEETTTCCEEEEE
T ss_pred cCCCeEEEEECCCCcEEEeecccCCCc------ccCCE----EE-CCEEEEEeCCCeEEEEECCCCcEEEEE
Confidence 457999999999999999876321100 01121 11 233334577899999999999999975
No 120
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=32.85 E-value=28 Score=37.29 Aligned_cols=62 Identities=16% Similarity=0.342 Sum_probs=43.2
Q ss_pred cCCCCeeeecCCCCceeccCCCCCCCCCCCCCCCCCCcccccCCCCCcEEEEcCCCceEEEeCCCCeeeccCCh
Q 002026 364 TDTGIVYYYNAVTGESTYEKPAGFKGEPDKVPVQPTPISMEHLTGTDWALVTTNDGKKYYYNSKMKVSSWQIPS 437 (978)
Q Consensus 364 ~~dGr~YYyN~~T~~StWekP~~l~~~~e~~~~qp~P~~~~~l~~~~W~e~~t~dGr~YyyN~~T~~S~We~P~ 437 (978)
+.+|.+|.||..|++..|........ ...|+ +. .+-.-+-+.+|.+|.||..|++..|....
T Consensus 110 ~~~g~l~a~d~~tG~~~W~~~~~~~~-------~~~p~----~~-~~~v~v~~~~g~l~~~d~~tG~~~W~~~~ 171 (376)
T 3q7m_A 110 SEKAQVYALNTSDGTVAWQTKVAGEA-------LSRPV----VS-DGLVLIHTSNGQLQALNEADGAVKWTVNL 171 (376)
T ss_dssp ETTSEEEEEETTTCCEEEEEECSSCC-------CSCCE----EE-TTEEEEECTTSEEEEEETTTCCEEEEEEC
T ss_pred cCCCEEEEEECCCCCEEEEEeCCCce-------EcCCE----EE-CCEEEEEcCCCeEEEEECCCCcEEEEEeC
Confidence 46799999999999999987643210 11121 11 23333457799999999999999998643
No 121
>1w8x_P Protein P16, protein S, GPS; virus, P3 major capsid protein, P30 TAPE measure, P31 penton protein, P16 membrane protein; 4.20A {Enterobacteria phage PRD1} SCOP: i.6.1.1
Probab=27.49 E-value=33 Score=30.61 Aligned_cols=35 Identities=20% Similarity=0.379 Sum_probs=19.4
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q 002026 264 RPWLPFLPYPAAYPSPFPLPAHGMPNPSVSQIDAQ 298 (978)
Q Consensus 264 ~~~~p~~~y~~~~~g~~~~p~~g~~~~~~~~p~~~ 298 (978)
.-.|||+-|.-+..|..-+|..|--.|++-+|+--
T Consensus 35 wegppymtynqpqagsvtlpvagytspsptlpnrn 69 (117)
T 1w8x_P 35 WEGPPYMTYNQPQAGSVTLPVAGYTSPSPTLPNRN 69 (117)
T ss_dssp TCCCCTTCSSCCCSCSCCCSCC-------------
T ss_pred CCCCCcccccCCCCcceeeeecccCCCCCCCCCCC
Confidence 45688999999999999999999888877666543
No 122
>3ecq_A Protein SPR0328, endo-alpha-N-acetylgalactosaminidase; distorted (beta/alpha)8 (TIM) barrel glycoside hydrolase DOM WALL; 2.90A {Streptococcus pneumoniae}
Probab=27.40 E-value=17 Score=46.64 Aligned_cols=25 Identities=28% Similarity=0.816 Sum_probs=22.6
Q ss_pred CCCceEEEeCCCCeeeccCChhHHH
Q 002026 417 NDGKKYYYNSKMKVSSWQIPSEVTE 441 (978)
Q Consensus 417 ~dGr~YyyN~~T~~S~We~P~el~~ 441 (978)
...|.|+||..-|+|+|++|+.+..
T Consensus 943 ~~eKLYH~N~~GGtsTW~LP~~w~~ 967 (1531)
T 3ecq_A 943 DKEKMYYFNTQAGATTWTLPSDWAK 967 (1531)
T ss_dssp GGCEEEEEESSCSEEEEECCHHHHT
T ss_pred CccceEEEcCCCCeEeeECCCcccC
Confidence 3579999999999999999999875
No 123
>1f5n_A Interferon-induced guanylate-binding protein 1; GBP, GTP hydrolysis, GDP, GMP, dynamin related, large GTPase family. GMPPNP, GPPNHP.; HET: GNP; 1.70A {Homo sapiens} SCOP: a.114.1.1 c.37.1.8 PDB: 1dg3_A* 2b8w_A* 2b92_A* 2bc9_A* 2d4h_A*
Probab=27.25 E-value=8.4e+02 Score=28.86 Aligned_cols=18 Identities=22% Similarity=0.410 Sum_probs=13.8
Q ss_pred cHHHHHHHHHHHHHHHHH
Q 002026 753 DREVIFNEYVRELKAAEE 770 (978)
Q Consensus 753 dRe~lFeeyI~eLe~~e~ 770 (978)
+.+.-|+++|+.|..+.+
T Consensus 519 ~~~~~~~e~~~ql~~kme 536 (592)
T 1f5n_A 519 QKERSYQEHLKQLTEKME 536 (592)
T ss_dssp HHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHH
Confidence 457889999999877543
No 124
>1f5n_A Interferon-induced guanylate-binding protein 1; GBP, GTP hydrolysis, GDP, GMP, dynamin related, large GTPase family. GMPPNP, GPPNHP.; HET: GNP; 1.70A {Homo sapiens} SCOP: a.114.1.1 c.37.1.8 PDB: 1dg3_A* 2b8w_A* 2b92_A* 2bc9_A* 2d4h_A*
Probab=26.03 E-value=8.8e+02 Score=28.68 Aligned_cols=28 Identities=36% Similarity=0.559 Sum_probs=20.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 002026 859 DREKLFREHIKTLYERCAHDFRGLLAEV 886 (978)
Q Consensus 859 dre~LF~dhI~~L~ek~r~dFr~LL~E~ 886 (978)
..++-|.+||+.|.++...+-+.+|.|.
T Consensus 519 ~~~~~~~e~~~ql~~kme~~~~~~~~e~ 546 (592)
T 1f5n_A 519 QKERSYQEHLKQLTEKMENDRVQLLKEQ 546 (592)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3467888888888877766666666664
No 125
>2j1d_G DAAM1, disheveled-associated activator of morphogenesis; actin assembly, protein binding; 2.55A {Homo sapiens} PDB: 2z6e_A
Probab=25.55 E-value=3.4e+02 Score=31.24 Aligned_cols=39 Identities=13% Similarity=0.358 Sum_probs=25.9
Q ss_pred CChHHHHHHhccCchhhcCCcccHHHHHHHHHHHHHHHHHH
Q 002026 731 SRWSKVKDILRDDPRYKSVRHEDREVIFNEYVRELKAAEEE 771 (978)
Q Consensus 731 T~Wsdvk~~L~~DpRy~aL~~~dRe~lFeeyI~eLe~~e~e 771 (978)
..+.++...|..|+. .+...+--.+|.+|+..+++..++
T Consensus 356 ~~~~~l~~yFGEd~~--~~~~~~fF~~~~~F~~~f~~A~~e 394 (483)
T 2j1d_G 356 DLFTKAVKHFGEEAG--KIQPDEFFGIFDQFLQAVSEAKQE 394 (483)
T ss_dssp HHHHHHHHHTTCCTT--SCCHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhCCCCC--CCCHHHHHHHHHHHHHHHHHHHHH
Confidence 456666677777764 334455567778889888876554
No 126
>3qf7_D MRE11; ABC-ATPase, ATPase, hydrolase; HET: ANP; 1.90A {Thermotoga maritima}
Probab=24.24 E-value=53 Score=25.67 Aligned_cols=32 Identities=31% Similarity=0.298 Sum_probs=19.6
Q ss_pred hHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHH
Q 002026 857 SSDREKLFREHIKTLY---ERCAHDFRGLLAEVIT 888 (978)
Q Consensus 857 ~~dre~LF~dhI~~L~---ek~r~dFr~LL~E~~~ 888 (978)
..|..+||++|++.-. ++...-|.+||.|+..
T Consensus 6 kld~felfkey~k~r~~~he~l~k~~~ell~evkk 40 (50)
T 3qf7_D 6 KLDYFELFKEYLKKREENHEKLLKILDELLDEVKK 40 (50)
T ss_dssp -CCHHHHHHHHHHHHCTTHHHHHHHHHHHHHHHHH
T ss_pred HhhHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHH
Confidence 3455789999987553 3444556666666543
No 127
>2zxq_A Endo-alpha-N-acetylgalactosaminidase; broken TIM barrel, glycosidase, hydrolase; 2.00A {Bifidobacterium longum}
Probab=20.47 E-value=27 Score=45.19 Aligned_cols=26 Identities=27% Similarity=0.616 Sum_probs=23.0
Q ss_pred CCCceEEEeCCCCeeeccCChhHHHh
Q 002026 417 NDGKKYYYNSKMKVSSWQIPSEVTEL 442 (978)
Q Consensus 417 ~dGr~YyyN~~T~~S~We~P~el~~l 442 (978)
.+.|.|+||..-|+|+|++|+.+..+
T Consensus 705 ~~~KlYh~N~~gG~stW~Lp~~w~~~ 730 (1376)
T 2zxq_A 705 SEQKLYHWNTKGGTTTWTLPDSWKNL 730 (1376)
T ss_dssp GGCEEEEEESSCEEEEEECCGGGTTC
T ss_pred CcceeEEEeCCCCeeeEECCcccCCC
Confidence 35799999999999999999998753
No 128
>1nkp_A C-MYC, MYC proto-oncogene protein; transcription, DNA, BHLHZ, heterodimer, transcription/DNA complex; 1.80A {Homo sapiens} SCOP: a.38.1.1
Probab=20.23 E-value=4.5e+02 Score=23.20 Aligned_cols=19 Identities=16% Similarity=0.058 Sum_probs=12.0
Q ss_pred cccHHHHHHHHHHHHHHHH
Q 002026 751 HEDREVIFNEYVRELKAAE 769 (978)
Q Consensus 751 ~~dRe~lFeeyI~eLe~~e 769 (978)
+...+.-=-+||..|....
T Consensus 43 K~~iL~~A~~YI~~L~~~~ 61 (88)
T 1nkp_A 43 KVVILKKATAYILSVQAEE 61 (88)
T ss_dssp HHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHH
Confidence 3344444468999997654
Done!