Query 002028
Match_columns 978
No_of_seqs 199 out of 356
Neff 3.9
Searched_HMMs 46136
Date Thu Mar 28 14:53:00 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/002028.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/002028hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PF03110 SBP: SBP domain; Int 100.0 1.1E-35 2.4E-40 265.5 -1.8 78 172-249 1-78 (79)
2 KOG4412 26S proteasome regulat 98.7 9.7E-09 2.1E-13 105.7 2.4 56 889-956 38-93 (226)
3 PF13637 Ank_4: Ankyrin repeat 98.3 4.8E-07 1E-11 74.2 4.4 53 889-954 1-53 (54)
4 PF12796 Ank_2: Ankyrin repeat 98.3 1.7E-06 3.6E-11 76.0 7.9 80 850-956 1-80 (89)
5 PF13857 Ank_5: Ankyrin repeat 98.2 7.8E-07 1.7E-11 74.2 3.4 42 888-941 15-56 (56)
6 KOG0515 p53-interacting protei 97.9 7.2E-06 1.6E-10 94.7 4.0 54 888-954 582-635 (752)
7 PHA02741 hypothetical protein; 97.8 7.2E-05 1.6E-09 74.3 8.5 92 848-956 62-153 (169)
8 KOG0512 Fetal globin-inducing 97.8 7.4E-05 1.6E-09 77.3 8.2 103 848-959 65-188 (228)
9 PHA02741 hypothetical protein; 97.8 6.7E-05 1.5E-09 74.5 7.6 90 848-956 23-119 (169)
10 PHA02875 ankyrin repeat protei 97.6 0.00016 3.5E-09 80.3 7.8 83 849-954 105-187 (413)
11 PHA02743 Viral ankyrin protein 97.5 0.00021 4.6E-09 71.2 7.3 53 889-954 94-147 (166)
12 PHA02791 ankyrin-like protein; 97.5 0.00019 4.1E-09 78.4 7.2 26 928-954 121-147 (284)
13 PHA02791 ankyrin-like protein; 97.5 0.00024 5.2E-09 77.6 7.7 97 848-955 63-180 (284)
14 PHA02736 Viral ankyrin protein 97.4 0.00025 5.5E-09 68.8 6.5 90 849-956 58-147 (154)
15 PHA02878 ankyrin repeat protei 97.4 0.00033 7.1E-09 80.0 8.1 85 848-954 170-254 (477)
16 PHA02743 Viral ankyrin protein 97.4 0.00035 7.7E-09 69.6 7.2 87 850-955 24-114 (166)
17 PHA02874 ankyrin repeat protei 97.4 0.00044 9.4E-09 77.9 8.7 66 889-955 124-210 (434)
18 PHA02875 ankyrin repeat protei 97.4 0.0004 8.7E-09 77.2 8.0 87 848-956 70-156 (413)
19 KOG4412 26S proteasome regulat 97.4 0.00026 5.6E-09 73.8 5.6 82 850-954 110-191 (226)
20 PHA02795 ankyrin-like protein; 97.3 0.00059 1.3E-08 79.0 8.3 58 889-958 221-285 (437)
21 PHA02878 ankyrin repeat protei 97.3 0.00062 1.4E-08 77.7 7.8 55 889-956 168-222 (477)
22 PHA03095 ankyrin-like protein; 97.3 0.00063 1.4E-08 76.4 7.7 85 849-954 225-309 (471)
23 PHA02874 ankyrin repeat protei 97.2 0.00075 1.6E-08 76.1 8.2 52 889-954 190-241 (434)
24 PHA02859 ankyrin repeat protei 97.2 0.00094 2E-08 69.0 7.8 54 889-954 87-144 (209)
25 PHA02798 ankyrin-like protein; 97.2 0.00094 2E-08 76.7 8.4 60 888-960 257-317 (489)
26 KOG0509 Ankyrin repeat and DHH 97.2 0.00041 8.8E-09 82.1 5.4 67 889-955 112-199 (600)
27 PHA02989 ankyrin repeat protei 97.1 0.0012 2.6E-08 76.0 8.3 61 888-961 255-316 (494)
28 PHA03100 ankyrin repeat protei 97.1 0.0011 2.5E-08 74.7 7.5 85 848-955 108-196 (480)
29 PLN03192 Voltage-dependent pot 97.1 0.0011 2.4E-08 81.4 7.7 82 850-954 529-610 (823)
30 PHA03100 ankyrin repeat protei 97.1 0.0029 6.3E-08 71.4 10.4 86 847-955 216-303 (480)
31 PHA02859 ankyrin repeat protei 97.0 0.0014 3E-08 67.8 6.9 74 864-955 104-179 (209)
32 PHA02884 ankyrin repeat protei 97.0 0.0015 3.2E-08 72.4 7.1 90 846-954 33-123 (300)
33 PTZ00322 6-phosphofructo-2-kin 97.0 0.0016 3.5E-08 78.5 8.0 83 850-955 86-168 (664)
34 PHA02946 ankyin-like protein; 97.0 0.0016 3.4E-08 75.0 7.5 55 888-954 71-126 (446)
35 PHA03095 ankyrin-like protein; 96.9 0.0022 4.8E-08 72.1 7.7 84 849-954 50-138 (471)
36 PHA02730 ankyrin-like protein; 96.9 0.0011 2.5E-08 80.1 5.4 57 888-956 40-100 (672)
37 PLN03192 Voltage-dependent pot 96.8 0.002 4.4E-08 79.1 7.1 82 849-955 594-675 (823)
38 COG0666 Arp FOG: Ankyrin repea 96.8 0.0017 3.7E-08 62.6 5.1 58 888-955 105-167 (235)
39 KOG4177 Ankyrin [Cell wall/mem 96.7 0.0022 4.8E-08 81.0 6.3 71 865-954 522-592 (1143)
40 PHA02876 ankyrin repeat protei 96.6 0.0049 1.1E-07 73.7 8.2 83 849-954 148-230 (682)
41 PF12796 Ank_2: Ankyrin repeat 96.6 0.0034 7.3E-08 55.2 5.0 47 893-956 1-47 (89)
42 PHA02946 ankyin-like protein; 96.4 0.0045 9.8E-08 71.3 6.2 81 848-959 299-380 (446)
43 PHA02736 Viral ankyrin protein 96.4 0.0015 3.2E-08 63.5 1.9 56 888-956 54-113 (154)
44 PHA02716 CPXV016; CPX019; EVM0 96.3 0.0089 1.9E-07 73.6 8.3 55 888-954 211-269 (764)
45 TIGR00870 trp transient-recept 96.3 0.004 8.6E-08 75.4 5.1 71 888-959 127-199 (743)
46 PHA02884 ankyrin repeat protei 96.3 0.0089 1.9E-07 66.3 7.0 76 848-944 72-147 (300)
47 PHA02917 ankyrin-like protein; 96.2 0.011 2.4E-07 71.7 7.8 82 858-958 428-510 (661)
48 PHA02798 ankyrin-like protein; 96.1 0.0094 2E-07 68.7 6.7 74 864-955 90-168 (489)
49 PHA02989 ankyrin repeat protei 96.1 0.011 2.4E-07 68.2 7.1 11 814-824 50-60 (494)
50 PHA02876 ankyrin repeat protei 96.1 0.012 2.7E-07 70.3 7.7 55 889-956 145-199 (682)
51 KOG0195 Integrin-linked kinase 96.1 0.0056 1.2E-07 67.7 4.3 23 889-911 34-56 (448)
52 KOG0510 Ankyrin repeat protein 96.0 0.0087 1.9E-07 73.0 5.7 55 889-955 306-361 (929)
53 COG0666 Arp FOG: Ankyrin repea 96.0 0.017 3.6E-07 55.8 6.5 82 856-957 121-202 (235)
54 KOG4177 Ankyrin [Cell wall/mem 95.8 0.0096 2.1E-07 75.5 5.0 94 842-958 536-632 (1143)
55 PF13606 Ank_3: Ankyrin repeat 95.7 0.0086 1.9E-07 45.0 2.6 24 889-912 2-25 (30)
56 KOG0510 Ankyrin repeat protein 95.7 0.013 2.8E-07 71.6 5.3 88 848-954 308-396 (929)
57 PHA02716 CPXV016; CPX019; EVM0 95.7 0.011 2.3E-07 73.0 4.6 56 888-955 496-560 (764)
58 KOG1710 MYND Zn-finger and ank 95.6 0.021 4.6E-07 63.3 6.3 57 888-956 44-100 (396)
59 cd00204 ANK ankyrin repeats; 95.6 0.023 4.9E-07 50.2 5.3 24 889-912 7-30 (126)
60 KOG0195 Integrin-linked kinase 95.5 0.019 4E-07 63.7 5.5 92 848-962 36-127 (448)
61 KOG0520 Uncharacterized conser 95.4 0.22 4.7E-06 62.7 14.5 255 681-956 406-701 (975)
62 PHA02795 ankyrin-like protein; 95.4 0.036 7.8E-07 64.6 7.5 88 849-954 152-240 (437)
63 PF00023 Ank: Ankyrin repeat H 95.3 0.015 3.3E-07 43.6 2.8 24 889-912 2-25 (33)
64 cd00204 ANK ankyrin repeats; 95.3 0.061 1.3E-06 47.5 7.1 86 848-956 9-94 (126)
65 PHA02917 ankyrin-like protein; 95.2 0.053 1.1E-06 66.0 8.5 84 849-954 71-157 (661)
66 PF13637 Ank_4: Ankyrin repeat 95.2 0.039 8.5E-07 45.3 5.2 52 848-909 3-54 (54)
67 KOG0502 Integral membrane anky 95.0 0.021 4.6E-07 61.5 3.7 64 889-966 160-224 (296)
68 KOG0509 Ankyrin repeat and DHH 94.5 0.051 1.1E-06 65.0 5.6 53 889-954 178-231 (600)
69 PF13606 Ank_3: Ankyrin repeat 94.4 0.022 4.7E-07 42.8 1.6 22 934-956 2-23 (30)
70 PHA02730 ankyrin-like protein; 94.1 0.1 2.3E-06 63.7 7.3 68 888-970 461-531 (672)
71 PF00023 Ank: Ankyrin repeat H 93.6 0.039 8.5E-07 41.4 1.6 22 934-956 2-23 (33)
72 PHA02792 ankyrin-like protein; 93.3 0.16 3.6E-06 61.6 7.0 43 889-943 410-452 (631)
73 KOG0505 Myosin phosphatase, re 93.2 0.088 1.9E-06 62.2 4.4 55 888-955 72-126 (527)
74 KOG0505 Myosin phosphatase, re 92.9 0.093 2E-06 62.0 4.0 52 890-954 199-250 (527)
75 PTZ00322 6-phosphofructo-2-kin 92.8 0.14 3E-06 62.4 5.4 52 891-955 84-135 (664)
76 KOG0514 Ankyrin repeat protein 92.5 0.18 3.9E-06 57.7 5.5 74 888-974 339-419 (452)
77 KOG0522 Ankyrin repeat protein 92.4 0.27 5.9E-06 58.3 6.9 81 855-956 30-110 (560)
78 TIGR00870 trp transient-recept 92.3 0.19 4.1E-06 61.2 5.8 21 891-911 54-75 (743)
79 KOG3676 Ca2+-permeable cation 91.5 0.2 4.3E-06 61.7 4.6 67 888-956 183-261 (782)
80 PHA02792 ankyrin-like protein; 91.1 0.86 1.9E-05 55.7 9.3 64 890-954 340-429 (631)
81 KOG4214 Myotrophin and similar 91.0 0.35 7.6E-06 46.7 4.7 57 885-954 30-86 (117)
82 KOG0507 CASK-interacting adapt 91.0 0.17 3.7E-06 62.0 3.4 84 848-954 51-134 (854)
83 PF13857 Ank_5: Ankyrin repeat 90.6 0.15 3.2E-06 42.7 1.7 30 925-955 7-36 (56)
84 KOG0508 Ankyrin repeat protein 89.4 0.51 1.1E-05 55.7 5.3 54 889-956 183-236 (615)
85 KOG0508 Ankyrin repeat protein 89.1 0.46 1E-05 56.0 4.7 52 890-954 118-169 (615)
86 KOG3609 Receptor-activated Ca2 89.1 0.41 8.9E-06 59.3 4.5 114 843-965 24-167 (822)
87 KOG0782 Predicted diacylglycer 88.2 0.21 4.5E-06 59.5 1.2 54 890-954 900-953 (1004)
88 KOG0502 Integral membrane anky 87.9 0.85 1.8E-05 49.7 5.4 83 849-954 163-245 (296)
89 KOG0520 Uncharacterized conser 85.7 0.67 1.5E-05 58.6 3.7 66 888-954 573-660 (975)
90 smart00248 ANK ankyrin repeats 85.3 0.87 1.9E-05 29.6 2.6 24 889-912 2-25 (30)
91 KOG0512 Fetal globin-inducing 79.0 2.3 5E-05 45.2 4.1 53 890-954 64-116 (228)
92 KOG0705 GTPase-activating prot 75.4 2.9 6.4E-05 50.5 4.1 54 889-955 661-714 (749)
93 KOG0818 GTPase-activating prot 73.9 3.9 8.6E-05 48.8 4.6 53 889-954 167-223 (669)
94 KOG2505 Ankyrin repeat protein 73.9 2.4 5.3E-05 50.5 2.9 79 868-967 413-491 (591)
95 KOG4214 Myotrophin and similar 73.4 7.7 0.00017 37.9 5.6 81 848-954 36-116 (117)
96 KOG0514 Ankyrin repeat protein 73.2 6.5 0.00014 45.7 5.9 84 849-954 343-426 (452)
97 KOG0507 CASK-interacting adapt 73.0 2.9 6.2E-05 51.9 3.3 54 888-954 114-167 (854)
98 PF01833 TIG: IPT/TIG domain; 72.7 17 0.00036 31.5 7.2 45 680-724 1-45 (85)
99 cd00603 IPT_PCSR IPT domain of 69.2 18 0.00039 32.5 6.8 40 680-719 1-40 (90)
100 cd00102 IPT Immunoglobulin-lik 60.8 32 0.00068 30.3 6.6 39 680-719 1-40 (89)
101 PF10866 DUF2704: Protein of u 59.4 7.6 0.00017 40.3 2.8 30 586-615 123-159 (168)
102 cd01180 IPT_plexin_repeat1 Fir 58.0 15 0.00033 34.1 4.3 40 680-719 1-42 (94)
103 PF09099 Qn_am_d_aIII: Quinohe 54.7 17 0.00037 34.0 4.0 27 679-705 1-27 (81)
104 smart00429 IPT ig-like, plexin 51.9 21 0.00046 32.0 4.1 39 680-719 2-40 (90)
105 KOG0705 GTPase-activating prot 50.8 15 0.00033 44.8 3.8 55 891-954 626-680 (749)
106 KOG4369 RTK signaling protein 49.9 13 0.00028 48.5 3.1 54 890-956 758-811 (2131)
107 KOG0783 Uncharacterized conser 49.5 8.6 0.00019 48.5 1.6 54 889-954 52-105 (1267)
108 cd01179 IPT_plexin_repeat2 Sec 48.6 27 0.00058 31.8 4.2 39 680-719 1-39 (85)
109 KOG0522 Ankyrin repeat protein 46.3 16 0.00034 44.3 3.0 54 891-954 22-75 (560)
110 KOG3676 Ca2+-permeable cation 42.4 49 0.0011 41.9 6.4 85 849-954 243-327 (782)
111 KOG0521 Putative GTPase activa 41.4 18 0.00038 45.9 2.6 65 889-954 656-741 (785)
112 KOG0515 p53-interacting protei 36.3 39 0.00085 41.2 4.1 47 895-954 556-602 (752)
113 KOG0506 Glutaminase (contains 32.1 30 0.00064 41.7 2.3 55 890-956 540-594 (622)
114 cd02849 CGTase_C_term Cgtase ( 32.1 1.7E+02 0.0037 27.1 6.7 78 679-771 2-79 (81)
115 KOG4369 RTK signaling protein 30.7 45 0.00099 43.9 3.6 85 850-954 828-912 (2131)
116 cd01181 IPT_plexin_repeat3 Thi 30.0 83 0.0018 29.9 4.5 41 680-720 1-42 (99)
117 PF14901 Jiv90: Cleavage induc 29.3 25 0.00054 33.9 0.9 19 210-228 26-44 (94)
118 KOG0521 Putative GTPase activa 28.8 45 0.00098 42.4 3.2 59 843-911 653-711 (785)
119 KOG0783 Uncharacterized conser 28.1 56 0.0012 41.9 3.7 44 888-943 85-128 (1267)
120 PRK07217 replication factor A; 27.6 36 0.00078 39.0 1.9 69 126-202 143-212 (311)
121 cd00604 IPT_CGTD IPT domain (d 26.6 3.5E+02 0.0077 25.0 7.8 77 680-773 1-79 (81)
122 PF05587 Anth_Ig: Anthrax rece 26.5 22 0.00047 34.9 0.0 37 681-717 7-45 (105)
123 KOG0818 GTPase-activating prot 24.7 90 0.0019 38.1 4.4 52 891-954 135-186 (669)
124 PRK00241 nudC NADH pyrophospha 24.6 25 0.00055 38.6 0.1 37 185-222 92-128 (256)
125 COG2816 NPY1 NTP pyrophosphohy 22.5 30 0.00065 39.0 0.2 34 187-221 106-139 (279)
126 KOG3609 Receptor-activated Ca2 22.5 53 0.0012 41.8 2.2 62 891-961 27-88 (822)
127 cd02969 PRX_like1 Peroxiredoxi 21.5 1.3E+02 0.0028 30.1 4.4 47 566-612 117-169 (171)
128 PF09297 zf-NADH-PPase: NADH p 20.3 30 0.00065 26.5 -0.3 31 190-221 1-31 (32)
No 1
>PF03110 SBP: SBP domain; InterPro: IPR004333 The SBP plant protein domain is a sequence specific DNA-binding domain []. Proteins with this domain probably function as transcription factors involved in the control of early flower development. The domain contains 10 conserved cysteine and histidine residues that probably are zinc ligands.; GO: 0003677 DNA binding, 0005634 nucleus; PDB: 1UL4_A 1WJ0_A 1UL5_A.
Probab=100.00 E-value=1.1e-35 Score=265.48 Aligned_cols=78 Identities=65% Similarity=1.119 Sum_probs=63.1
Q ss_pred CcccCCChhhhccCccccccccccccccCcceeeeCCccchHhhhhccCCCCCCcccccchHHHHHhhHHhhhccCCC
Q 002028 172 MCQVDNCKEDLSNAKDYHRRHKVCELHSKSTKALVGKQMQRFCQQCSRFHPLSEFDEGKRSCRRRLAGHNRRRRKTQP 249 (978)
Q Consensus 172 ~CqV~gC~~dL~~~k~Y~rRhrvCe~H~kA~~v~v~G~~~RFCQQCsrFH~L~eFd~~kRSCR~rL~~hn~RRRk~~~ 249 (978)
+||||||++||+.+|.||+||||||.|+||++|+++|.++||||||+|||+|+||||+|||||++|++||+||||.++
T Consensus 1 ~CqV~gC~~dL~~~k~Y~rR~rICe~H~ka~~V~~~G~~~RFCQQC~rfh~l~eFdg~kRSCr~~L~~h~~RRr~~~~ 78 (79)
T PF03110_consen 1 RCQVDGCGADLSGAKEYHRRYRICEEHAKAPVVVVDGVEQRFCQQCGRFHPLSEFDGGKRSCRARLARHNERRRKRQQ 78 (79)
T ss_dssp C-SSTTEE-EETS--SSCCCTT--HHHHTHSEEEETTEEEEE-TTTSSEEETTCB-SSTTSBSTTTT-SSS---S-S-
T ss_pred CCcCCCCCcchhhhHHHhhccCcchhhcCCCeEEECChhHHHHHHHHcCCCHHHHcchhhhHHHHHHHHHHHhccccC
Confidence 599999999999999999999999999999999999999999999999999999999999999999999999999865
No 2
>KOG4412 consensus 26S proteasome regulatory complex, subunit PSMD10 [Posttranslational modification, protein turnover, chaperones]
Probab=98.65 E-value=9.7e-09 Score=105.70 Aligned_cols=56 Identities=27% Similarity=0.385 Sum_probs=48.1
Q ss_pred hchHHHHHHHcCChhHHHHHHhhcccCCCCCCCccccCCCCCCCCCCchhhhhcccCChhHHHHHhhc
Q 002028 889 EIQLLNRAVKMKCRRMVDLLIHYSLTSSNDTPQKYIFPPNLAGPGGITPLHLAACTSDSDDIIDALTN 956 (978)
Q Consensus 889 e~~LLH~AV~~~s~~mVelLL~~~~~~~~~~~~~y~F~pd~~GpsGlTPLHIAAs~~g~~~vldaLt~ 956 (978)
+-+||||||+.++.++|.|||. .+ ...||--+.+|||||||||+. |+++|++.|.+
T Consensus 38 ~Rt~LHwa~S~g~~eiv~fLls-q~----------nv~~ddkDdaGWtPlhia~s~-g~~evVk~Ll~ 93 (226)
T KOG4412|consen 38 GRTPLHWACSFGHVEIVYFLLS-QP----------NVKPDDKDDAGWTPLHIAASN-GNDEVVKELLN 93 (226)
T ss_pred CCceeeeeeecCchhHHHHHHh-cC----------CCCCCCccccCCchhhhhhhc-CcHHHHHHHhc
Confidence 4699999999999999999996 43 344666689999999999999 89999999943
No 3
>PF13637 Ank_4: Ankyrin repeats (many copies); PDB: 3B95_A 3B7B_A 3F6Q_A 2KBX_A 3IXE_A 2DWZ_C 2DVW_A 3AJI_A 1S70_B 2HE0_A ....
Probab=98.35 E-value=4.8e-07 Score=74.15 Aligned_cols=53 Identities=30% Similarity=0.300 Sum_probs=40.5
Q ss_pred hchHHHHHHHcCChhHHHHHHhhcccCCCCCCCccccCCCCCCCCCCchhhhhcccCChhHHHHHh
Q 002028 889 EIQLLNRAVKMKCRRMVDLLIHYSLTSSNDTPQKYIFPPNLAGPGGITPLHLAACTSDSDDIIDAL 954 (978)
Q Consensus 889 e~~LLH~AV~~~s~~mVelLL~~~~~~~~~~~~~y~F~pd~~GpsGlTPLHIAAs~~g~~~vldaL 954 (978)
++++||+|++.++.++|++|+... .+++..+..|.||||+|+.. |..++++.|
T Consensus 1 g~t~lh~A~~~g~~~~~~~Ll~~~------------~din~~d~~g~t~lh~A~~~-g~~~~~~~L 53 (54)
T PF13637_consen 1 GRTPLHWAARSGNLEIVKLLLEHG------------ADINAQDEDGRTPLHYAAKN-GNIDIVKFL 53 (54)
T ss_dssp SSBHHHHHHHTT-HHHHHHHHHTT------------SGTT-B-TTS--HHHHHHHT-T-HHHHHHH
T ss_pred CChHHHHHHHhCCHHHHHHHHHCC------------CCCCCCCCCCCCHHHHHHHc-cCHHHHHHH
Confidence 468999999999999999999763 45777788999999999977 888888876
No 4
>PF12796 Ank_2: Ankyrin repeats (3 copies); InterPro: IPR020683 This entry represents the ankyrin repeat-containing domain. These domains contain multiple repeats of a beta(2)-alpha(2) motif. The ankyrin repeat is one of the most common protein-protein interaction motifs in nature. Ankyrin repeats are tandemly repeated modules of about 33 amino acids. They occur in a large number of functionally diverse proteins mainly from eukaryotes. The few known examples from prokaryotes and viruses may be the result of horizontal gene transfers []. The repeat has been found in proteins of diverse function such as transcriptional initiators, cell-cycle regulators, cytoskeletal, ion transporters and signal transducers. The ankyrin fold appears to be defined by its structure rather than its function since there is no specific sequence or structure which is universally recognised by it. The conserved fold of the ankyrin repeat unit is known from several crystal and solution structures [, , , ]. Each repeat folds into a helix-loop-helix structure with a beta-hairpin/loop region projecting out from the helices at a 90o angle. The repeats stack together to form an L-shaped structure [, ].; PDB: 3AAA_C 3F6Q_A 2KBX_A 3IXE_A 3TWR_D 3TWV_A 3TWT_B 3TWQ_A 3TWS_A 3TWX_B ....
Probab=98.34 E-value=1.7e-06 Score=76.02 Aligned_cols=80 Identities=23% Similarity=0.223 Sum_probs=63.9
Q ss_pred HHHHhccchHHHHHHHHHHHHhccccCCCccHHHHHHhhhchHHHHHHHcCChhHHHHHHhhcccCCCCCCCccccCCCC
Q 002028 850 LVFSVDRGCCALVKAILDILVEGNLSMDGLSRESLEMLWEIQLLNRAVKMKCRRMVDLLIHYSLTSSNDTPQKYIFPPNL 929 (978)
Q Consensus 850 L~FAverdWcAVvkkLLdiL~~g~v~~~~~s~~~~~~l~e~~LLH~AV~~~s~~mVelLL~~~~~~~~~~~~~y~F~pd~ 929 (978)
|-+|+.++=..+++.|+..- .+.+. +-++||+|+..++.+||++|+.+. .+++.
T Consensus 1 L~~A~~~~~~~~~~~ll~~~----~~~~~----------~~~~l~~A~~~~~~~~~~~Ll~~g------------~~~~~ 54 (89)
T PF12796_consen 1 LHIAAQNGNLEILKFLLEKG----ADINL----------GNTALHYAAENGNLEIVKLLLENG------------ADINS 54 (89)
T ss_dssp HHHHHHTTTHHHHHHHHHTT----STTTS----------SSBHHHHHHHTTTHHHHHHHHHTT------------TCTT-
T ss_pred CHHHHHcCCHHHHHHHHHCc----CCCCC----------CCCHHHHHHHcCCHHHHHHHHHhc------------ccccc
Confidence 45788888899999998822 12111 558999999999999999999874 45677
Q ss_pred CCCCCCchhhhhcccCChhHHHHHhhc
Q 002028 930 AGPGGITPLHLAACTSDSDDIIDALTN 956 (978)
Q Consensus 930 ~GpsGlTPLHIAAs~~g~~~vldaLt~ 956 (978)
.+..|+||||+|+.. +..++++.|.+
T Consensus 55 ~~~~g~t~L~~A~~~-~~~~~~~~Ll~ 80 (89)
T PF12796_consen 55 QDKNGNTALHYAAEN-GNLEIVKLLLE 80 (89)
T ss_dssp BSTTSSBHHHHHHHT-THHHHHHHHHH
T ss_pred cCCCCCCHHHHHHHc-CCHHHHHHHHH
Confidence 779999999999886 99999999954
No 5
>PF13857 Ank_5: Ankyrin repeats (many copies); PDB: 1SW6_A 3EHR_B 3EHQ_A.
Probab=98.24 E-value=7.8e-07 Score=74.20 Aligned_cols=42 Identities=31% Similarity=0.429 Sum_probs=28.1
Q ss_pred hhchHHHHHHHcCChhHHHHHHhhcccCCCCCCCccccCCCCCCCCCCchhhhh
Q 002028 888 WEIQLLNRAVKMKCRRMVDLLIHYSLTSSNDTPQKYIFPPNLAGPGGITPLHLA 941 (978)
Q Consensus 888 ~e~~LLH~AV~~~s~~mVelLL~~~~~~~~~~~~~y~F~pd~~GpsGlTPLHIA 941 (978)
.+.|+||+|+++++.++|++||.+. -++++.+..|+||||+|
T Consensus 15 ~G~T~LH~A~~~g~~~~v~~Ll~~g------------~d~~~~d~~G~Tpl~~A 56 (56)
T PF13857_consen 15 YGNTPLHWAARYGHSEVVRLLLQNG------------ADPNAKDKDGQTPLHYA 56 (56)
T ss_dssp TS--HHHHHHHHT-HHHHHHHHHCT--------------TT---TTS--HHHH-
T ss_pred CCCcHHHHHHHcCcHHHHHHHHHCc------------CCCCCCcCCCCCHHHhC
Confidence 4679999999999999999999653 56788899999999998
No 6
>KOG0515 consensus p53-interacting protein 53BP/ASPP, contains ankyrin and SH3 domains [Cell cycle control, cell division, chromosome partitioning]
Probab=97.91 E-value=7.2e-06 Score=94.67 Aligned_cols=54 Identities=30% Similarity=0.362 Sum_probs=45.8
Q ss_pred hhchHHHHHHHcCChhHHHHHHhhcccCCCCCCCccccCCCCCCCCCCchhhhhcccCChhHHHHHh
Q 002028 888 WEIQLLNRAVKMKCRRMVDLLIHYSLTSSNDTPQKYIFPPNLAGPGGITPLHLAACTSDSDDIIDAL 954 (978)
Q Consensus 888 ~e~~LLH~AV~~~s~~mVelLL~~~~~~~~~~~~~y~F~pd~~GpsGlTPLHIAAs~~g~~~vldaL 954 (978)
++||.||-||-.++.+||+|||.+.. ..+++|-.||||||.||+- .+.-|...|
T Consensus 582 EGITaLHNAiCaghyeIVkFLi~~ga------------nVNa~DSdGWTPLHCAASC-Nnv~~ckqL 635 (752)
T KOG0515|consen 582 EGITALHNAICAGHYEIVKFLIEFGA------------NVNAADSDGWTPLHCAASC-NNVPMCKQL 635 (752)
T ss_pred cchhHHhhhhhcchhHHHHHHHhcCC------------cccCccCCCCchhhhhhhc-CchHHHHHH
Confidence 57999999999999999999998753 3557799999999999998 555666666
No 7
>PHA02741 hypothetical protein; Provisional
Probab=97.80 E-value=7.2e-05 Score=74.30 Aligned_cols=92 Identities=15% Similarity=0.202 Sum_probs=66.9
Q ss_pred HHHHHHhccchHHHHHHHHHHHHhccccCCCccHHHHHHhhhchHHHHHHHcCChhHHHHHHhhcccCCCCCCCccccCC
Q 002028 848 FLLVFSVDRGCCALVKAILDILVEGNLSMDGLSRESLEMLWEIQLLNRAVKMKCRRMVDLLIHYSLTSSNDTPQKYIFPP 927 (978)
Q Consensus 848 ~LL~FAverdWcAVvkkLLdiL~~g~v~~~~~s~~~~~~l~e~~LLH~AV~~~s~~mVelLL~~~~~~~~~~~~~y~F~p 927 (978)
..|-+|+..+.-.++..++..|..-+.+..... ...+.||||+||+.++.++|++||... .-++
T Consensus 62 T~Lh~A~~~g~~~~~~~ii~~Ll~~gadin~~~-----~~~g~TpLh~A~~~~~~~iv~~Ll~~~-----------g~~~ 125 (169)
T PHA02741 62 MCIHIAAEKHEAQLAAEIIDHLIELGADINAQE-----MLEGDTALHLAAHRRDHDLAEWLCCQP-----------GIDL 125 (169)
T ss_pred cHHHHHHHcCChHHHHHHHHHHHHcCCCCCCCC-----cCCCCCHHHHHHHcCCHHHHHHHHhCC-----------CCCC
Confidence 456677777765556677777776554433221 124789999999999999999999642 1235
Q ss_pred CCCCCCCCchhhhhcccCChhHHHHHhhc
Q 002028 928 NLAGPGGITPLHLAACTSDSDDIIDALTN 956 (978)
Q Consensus 928 d~~GpsGlTPLHIAAs~~g~~~vldaLt~ 956 (978)
++.+..|+||||+|+.. +..++++.|.+
T Consensus 126 ~~~n~~g~tpL~~A~~~-~~~~iv~~L~~ 153 (169)
T PHA02741 126 HFCNADNKSPFELAIDN-EDVAMMQILRE 153 (169)
T ss_pred CcCCCCCCCHHHHHHHC-CCHHHHHHHHH
Confidence 56678899999999987 77799999854
No 8
>KOG0512 consensus Fetal globin-inducing factor (contains ankyrin repeats) [Transcription]
Probab=97.77 E-value=7.4e-05 Score=77.32 Aligned_cols=103 Identities=21% Similarity=0.237 Sum_probs=71.6
Q ss_pred HHHHHHhccchHHHHHHHHHHHHhccccCCCccHHHHHHhhhchHHHHHHHcCChhHHHHHHhhcccCC----CC-----
Q 002028 848 FLLVFSVDRGCCALVKAILDILVEGNLSMDGLSRESLEMLWEIQLLNRAVKMKCRRMVDLLIHYSLTSS----ND----- 918 (978)
Q Consensus 848 ~LL~FAverdWcAVvkkLLdiL~~g~v~~~~~s~~~~~~l~e~~LLH~AV~~~s~~mVelLL~~~~~~~----~~----- 918 (978)
+|+.+|.+.+=-..|+.||.-=. ..|.+.+- .|-||||||+..|+.+||+.||.|..+.. .|
T Consensus 65 rl~lwaae~nrl~eV~~lL~e~a-n~vNtrD~--------D~YTpLHRAaYn~h~div~~ll~~gAn~~a~T~~GWTPLh 135 (228)
T KOG0512|consen 65 RLLLWAAEKNRLTEVQRLLSEKA-NHVNTRDE--------DEYTPLHRAAYNGHLDIVHELLLSGANKEAKTNEGWTPLH 135 (228)
T ss_pred HHHHHHHhhccHHHHHHHHHhcc-cccccccc--------ccccHHHHHHhcCchHHHHHHHHccCCcccccccCccchh
Confidence 57777788777788888775321 22332211 37899999999999999999997764211 11
Q ss_pred CC----------CccccCCC--CCCCCCCchhhhhcccCChhHHHHHhhcCcc
Q 002028 919 TP----------QKYIFPPN--LAGPGGITPLHLAACTSDSDDIIDALTNDPQ 959 (978)
Q Consensus 919 ~~----------~~y~F~pd--~~GpsGlTPLHIAAs~~g~~~vldaLt~DP~ 959 (978)
++ ....|..| +.--+-||||||||...+.-+.+..|..||+
T Consensus 136 SAckWnN~~va~~LLqhgaDVnA~t~g~ltpLhlaa~~rn~r~t~~~Ll~dry 188 (228)
T KOG0512|consen 136 SACKWNNFEVAGRLLQHGADVNAQTKGLLTPLHLAAGNRNSRDTLELLLHDRY 188 (228)
T ss_pred hhhcccchhHHHHHHhccCcccccccccchhhHHhhcccchHHHHHHHhhccc
Confidence 00 01133344 4467889999999999999999999988876
No 9
>PHA02741 hypothetical protein; Provisional
Probab=97.76 E-value=6.7e-05 Score=74.50 Aligned_cols=90 Identities=18% Similarity=0.192 Sum_probs=64.5
Q ss_pred HHHHHHhccchHHHHHHHHHHHHhcc--ccCCCccHHHHHHhhhchHHHHHHHcCC----hhHHHHHHhhcccCCCCCCC
Q 002028 848 FLLVFSVDRGCCALVKAILDILVEGN--LSMDGLSRESLEMLWEIQLLNRAVKMKC----RRMVDLLIHYSLTSSNDTPQ 921 (978)
Q Consensus 848 ~LL~FAverdWcAVvkkLLdiL~~g~--v~~~~~s~~~~~~l~e~~LLH~AV~~~s----~~mVelLL~~~~~~~~~~~~ 921 (978)
..|-+|+..++..+++.|+..+...+ ..... ... .+.|+||.|+..++ .+++++|+.+.
T Consensus 23 t~Lh~Aa~~g~~~~v~~l~~~~~~~~~ga~in~-----~d~-~g~T~Lh~A~~~g~~~~~~~ii~~Ll~~g--------- 87 (169)
T PHA02741 23 NFFHEAARCGCFDIIARFTPFIRGDCHAAALNA-----TDD-AGQMCIHIAAEKHEAQLAAEIIDHLIELG--------- 87 (169)
T ss_pred CHHHHHHHcCCHHHHHHHHHHhccchhhhhhhc-----cCC-CCCcHHHHHHHcCChHHHHHHHHHHHHcC---------
Confidence 56778999999999999987552111 01111 111 36799999999999 58888888764
Q ss_pred ccccCCCCCCC-CCCchhhhhcccCChhHHHHHhhc
Q 002028 922 KYIFPPNLAGP-GGITPLHLAACTSDSDDIIDALTN 956 (978)
Q Consensus 922 ~y~F~pd~~Gp-sGlTPLHIAAs~~g~~~vldaLt~ 956 (978)
.+.+.... .|+||||+|+.. +..+++..|..
T Consensus 88 ---adin~~~~~~g~TpLh~A~~~-~~~~iv~~Ll~ 119 (169)
T PHA02741 88 ---ADINAQEMLEGDTALHLAAHR-RDHDLAEWLCC 119 (169)
T ss_pred ---CCCCCCCcCCCCCHHHHHHHc-CCHHHHHHHHh
Confidence 23445454 899999999977 77788888854
No 10
>PHA02875 ankyrin repeat protein; Provisional
Probab=97.57 E-value=0.00016 Score=80.31 Aligned_cols=83 Identities=20% Similarity=0.116 Sum_probs=55.9
Q ss_pred HHHHHhccchHHHHHHHHHHHHhccccCCCccHHHHHHhhhchHHHHHHHcCChhHHHHHHhhcccCCCCCCCccccCCC
Q 002028 849 LLVFSVDRGCCALVKAILDILVEGNLSMDGLSRESLEMLWEIQLLNRAVKMKCRRMVDLLIHYSLTSSNDTPQKYIFPPN 928 (978)
Q Consensus 849 LL~FAverdWcAVvkkLLdiL~~g~v~~~~~s~~~~~~l~e~~LLH~AV~~~s~~mVelLL~~~~~~~~~~~~~y~F~pd 928 (978)
.|-+|+..+-..+++.||+- +.+..... ..+.||||+|++.+..++|++|+.+. .+++
T Consensus 105 pL~~A~~~~~~~iv~~Ll~~----gad~~~~~------~~g~tpLh~A~~~~~~~~v~~Ll~~g------------~~~~ 162 (413)
T PHA02875 105 PLHLATILKKLDIMKLLIAR----GADPDIPN------TDKFSPLHLAVMMGDIKGIELLIDHK------------ACLD 162 (413)
T ss_pred HHHHHHHhCCHHHHHHHHhC----CCCCCCCC------CCCCCHHHHHHHcCCHHHHHHHHhcC------------CCCC
Confidence 45556666666666666543 22222111 13568888888888888888888764 2355
Q ss_pred CCCCCCCchhhhhcccCChhHHHHHh
Q 002028 929 LAGPGGITPLHLAACTSDSDDIIDAL 954 (978)
Q Consensus 929 ~~GpsGlTPLHIAAs~~g~~~vldaL 954 (978)
..+..|.||||+|+.. |..+++..|
T Consensus 163 ~~d~~g~TpL~~A~~~-g~~eiv~~L 187 (413)
T PHA02875 163 IEDCCGCTPLIIAMAK-GDIAICKML 187 (413)
T ss_pred CCCCCCCCHHHHHHHc-CCHHHHHHH
Confidence 6678889999998887 777888888
No 11
>PHA02743 Viral ankyrin protein; Provisional
Probab=97.53 E-value=0.00021 Score=71.18 Aligned_cols=53 Identities=17% Similarity=0.130 Sum_probs=41.4
Q ss_pred hchHHHHHHHcCChhHHHHHHh-hcccCCCCCCCccccCCCCCCCCCCchhhhhcccCChhHHHHHh
Q 002028 889 EIQLLNRAVKMKCRRMVDLLIH-YSLTSSNDTPQKYIFPPNLAGPGGITPLHLAACTSDSDDIIDAL 954 (978)
Q Consensus 889 e~~LLH~AV~~~s~~mVelLL~-~~~~~~~~~~~~y~F~pd~~GpsGlTPLHIAAs~~g~~~vldaL 954 (978)
+.||||+||..++.+||++|+. .. -+++.....|+||||+|+.. +..++++.|
T Consensus 94 g~TpLh~A~~~g~~~iv~~Ll~~~g------------ad~~~~d~~g~tpL~~A~~~-~~~~iv~~L 147 (166)
T PHA02743 94 GNTLLHIAASTKNYELAEWLCRQLG------------VNLGAINYQHETAYHIAYKM-RDRRMMEIL 147 (166)
T ss_pred CCcHHHHHHHhCCHHHHHHHHhccC------------CCccCcCCCCCCHHHHHHHc-CCHHHHHHH
Confidence 5688888888888888888884 42 34566778899999999877 666788888
No 12
>PHA02791 ankyrin-like protein; Provisional
Probab=97.51 E-value=0.00019 Score=78.37 Aligned_cols=26 Identities=19% Similarity=0.208 Sum_probs=14.8
Q ss_pred CCCCCCCC-chhhhhcccCChhHHHHHh
Q 002028 928 NLAGPGGI-TPLHLAACTSDSDDIIDAL 954 (978)
Q Consensus 928 d~~GpsGl-TPLHIAAs~~g~~~vldaL 954 (978)
+..+..|| ||||+||.. +..+|+..|
T Consensus 121 n~~~~~g~~TpL~~Aa~~-g~~eivk~L 147 (284)
T PHA02791 121 MFYGKTGWKTSFYHAVML-NDVSIVSYF 147 (284)
T ss_pred CccCCCCCcHHHHHHHHc-CCHHHHHHH
Confidence 33455555 566666665 555566665
No 13
>PHA02791 ankyrin-like protein; Provisional
Probab=97.49 E-value=0.00024 Score=77.60 Aligned_cols=97 Identities=15% Similarity=0.088 Sum_probs=54.8
Q ss_pred HHHHHHhccchHHHHHHHHHHHHhccccCCCccHHHHHHhhhchHHHHHHHcCChhHHHHHHhhcccC--C--CC-C-C-
Q 002028 848 FLLVFSVDRGCCALVKAILDILVEGNLSMDGLSRESLEMLWEIQLLNRAVKMKCRRMVDLLIHYSLTS--S--ND-T-P- 920 (978)
Q Consensus 848 ~LL~FAverdWcAVvkkLLdiL~~g~v~~~~~s~~~~~~l~e~~LLH~AV~~~s~~mVelLL~~~~~~--~--~~-~-~- 920 (978)
..|-+|+..+...+++.||..- .+.+.... .+.|+||+|+..++.++|++|+.+.... . +| . +
T Consensus 63 TpLh~Aa~~g~~eiV~lLL~~G----advn~~d~------~G~TpLh~Aa~~g~~eivk~Ll~~gadin~~~~~g~~TpL 132 (284)
T PHA02791 63 FPLHQAATLEDTKIVKILLFSG----MDDSQFDD------KGNTALYYAVDSGNMQTVKLFVKKNWRLMFYGKTGWKTSF 132 (284)
T ss_pred CHHHHHHHCCCHHHHHHHHHCC----CCCCCCCC------CCCCHHHHHHHcCCHHHHHHHHHCCCCcCccCCCCCcHHH
Confidence 4566777777777777776421 11111111 2456666666666666666666654311 1 11 0 0
Q ss_pred -----------Ccccc--CCCCCC-CCCCchhhhhcccCChhHHHHHhh
Q 002028 921 -----------QKYIF--PPNLAG-PGGITPLHLAACTSDSDDIIDALT 955 (978)
Q Consensus 921 -----------~~y~F--~pd~~G-psGlTPLHIAAs~~g~~~vldaLt 955 (978)
..|+. .|+..+ ..|.||||+||.. |..+++.+|.
T Consensus 133 ~~Aa~~g~~eivk~LL~~~~~~~d~~~g~TpLh~Aa~~-g~~eiv~lLL 180 (284)
T PHA02791 133 YHAVMLNDVSIVSYFLSEIPSTFDLAILLSCIHITIKN-GHVDMMILLL 180 (284)
T ss_pred HHHHHcCCHHHHHHHHhcCCcccccccCccHHHHHHHc-CCHHHHHHHH
Confidence 00111 133222 3589999999999 8889999993
No 14
>PHA02736 Viral ankyrin protein; Provisional
Probab=97.45 E-value=0.00025 Score=68.76 Aligned_cols=90 Identities=13% Similarity=0.093 Sum_probs=60.2
Q ss_pred HHHHHhccchHHHHHHHHHHHHhccccCCCccHHHHHHhhhchHHHHHHHcCChhHHHHHHhhcccCCCCCCCccccCCC
Q 002028 849 LLVFSVDRGCCALVKAILDILVEGNLSMDGLSRESLEMLWEIQLLNRAVKMKCRRMVDLLIHYSLTSSNDTPQKYIFPPN 928 (978)
Q Consensus 849 LL~FAverdWcAVvkkLLdiL~~g~v~~~~~s~~~~~~l~e~~LLH~AV~~~s~~mVelLL~~~~~~~~~~~~~y~F~pd 928 (978)
.|-+|+..+...++ .++.+|.+-+.+..... -..+.|+||+|++.++.++|++||... .-+++
T Consensus 58 ~Lh~a~~~~~~~~~-e~v~~Ll~~gadin~~~-----~~~g~T~Lh~A~~~~~~~i~~~Ll~~~-----------g~d~n 120 (154)
T PHA02736 58 CVHIVSNPDKADPQ-EKLKLLMEWGADINGKE-----RVFGNTPLHIAVYTQNYELATWLCNQP-----------GVNME 120 (154)
T ss_pred EEEeecccCchhHH-HHHHHHHHcCCCccccC-----CCCCCcHHHHHHHhCCHHHHHHHHhCC-----------CCCCc
Confidence 34455555554332 33344444333433221 113679999999999999999999531 12456
Q ss_pred CCCCCCCchhhhhcccCChhHHHHHhhc
Q 002028 929 LAGPGGITPLHLAACTSDSDDIIDALTN 956 (978)
Q Consensus 929 ~~GpsGlTPLHIAAs~~g~~~vldaLt~ 956 (978)
.....|.||||+|+.. +..++++.|..
T Consensus 121 ~~~~~g~tpL~~A~~~-~~~~i~~~Ll~ 147 (154)
T PHA02736 121 ILNYAFKTPYYVACER-HDAKMMNILRA 147 (154)
T ss_pred cccCCCCCHHHHHHHc-CCHHHHHHHHH
Confidence 6788999999999987 78899999854
No 15
>PHA02878 ankyrin repeat protein; Provisional
Probab=97.43 E-value=0.00033 Score=79.96 Aligned_cols=85 Identities=20% Similarity=0.237 Sum_probs=52.7
Q ss_pred HHHHHHhccchHHHHHHHHHHHHhccccCCCccHHHHHHhhhchHHHHHHHcCChhHHHHHHhhcccCCCCCCCccccCC
Q 002028 848 FLLVFSVDRGCCALVKAILDILVEGNLSMDGLSRESLEMLWEIQLLNRAVKMKCRRMVDLLIHYSLTSSNDTPQKYIFPP 927 (978)
Q Consensus 848 ~LL~FAverdWcAVvkkLLdiL~~g~v~~~~~s~~~~~~l~e~~LLH~AV~~~s~~mVelLL~~~~~~~~~~~~~y~F~p 927 (978)
-.|-+|+..+-..+++.||.- +.+..... -.+.||||.||+.++.+||++|+.+.. ++
T Consensus 170 tpLh~A~~~~~~~iv~~Ll~~----gad~n~~d------~~g~tpLh~A~~~~~~~iv~~Ll~~ga------------~i 227 (477)
T PHA02878 170 TALHYATENKDQRLTELLLSY----GANVNIPD------KTNNSPLHHAVKHYNKPIVHILLENGA------------ST 227 (477)
T ss_pred CHHHHHHhCCCHHHHHHHHHC----CCCCCCcC------CCCCCHHHHHHHhCCHHHHHHHHHcCC------------CC
Confidence 456677888888888877753 22222211 136788888888888888888887642 23
Q ss_pred CCCCCCCCchhhhhcccCChhHHHHHh
Q 002028 928 NLAGPGGITPLHLAACTSDSDDIIDAL 954 (978)
Q Consensus 928 d~~GpsGlTPLHIAAs~~g~~~vldaL 954 (978)
+..+..|.||||+|+...+..+++..|
T Consensus 228 n~~d~~g~TpLh~A~~~~~~~~iv~~L 254 (477)
T PHA02878 228 DARDKCGNTPLHISVGYCKDYDILKLL 254 (477)
T ss_pred CCCCCCCCCHHHHHHHhcCCHHHHHHH
Confidence 444555666666665543445555555
No 16
>PHA02743 Viral ankyrin protein; Provisional
Probab=97.41 E-value=0.00035 Score=69.58 Aligned_cols=87 Identities=15% Similarity=0.121 Sum_probs=59.5
Q ss_pred HHHHhccchHHHHHHHHHHHHhccccCCCccHHHHHHhhhchHHHHHHHcCChhH---HHHHHhhcccCCCCCCCccccC
Q 002028 850 LVFSVDRGCCALVKAILDILVEGNLSMDGLSRESLEMLWEIQLLNRAVKMKCRRM---VDLLIHYSLTSSNDTPQKYIFP 926 (978)
Q Consensus 850 L~FAverdWcAVvkkLLdiL~~g~v~~~~~s~~~~~~l~e~~LLH~AV~~~s~~m---VelLL~~~~~~~~~~~~~y~F~ 926 (978)
+-+|+..+=-..+++++..|.+.+........ .+.|+||+|+..++.+. |++|+.+. -+
T Consensus 24 l~~a~~~g~~~~l~~~~~~l~~~g~~~~~~d~------~g~t~Lh~Aa~~g~~~~~~~i~~Ll~~G------------ad 85 (166)
T PHA02743 24 FLRICRTGNIYELMEVAPFISGDGHLLHRYDH------HGRQCTHMVAWYDRANAVMKIELLVNMG------------AD 85 (166)
T ss_pred HHHHHHcCCHHHHHHHHHHHhhcchhhhccCC------CCCcHHHHHHHhCccCHHHHHHHHHHcC------------CC
Confidence 33455555555566666666654433332221 36899999999988654 78999764 23
Q ss_pred CCCCC-CCCCchhhhhcccCChhHHHHHhh
Q 002028 927 PNLAG-PGGITPLHLAACTSDSDDIIDALT 955 (978)
Q Consensus 927 pd~~G-psGlTPLHIAAs~~g~~~vldaLt 955 (978)
++... ..|.||||+||.. +..+++..|.
T Consensus 86 in~~d~~~g~TpLh~A~~~-g~~~iv~~Ll 114 (166)
T PHA02743 86 INARELGTGNTLLHIAAST-KNYELAEWLC 114 (166)
T ss_pred CCCCCCCCCCcHHHHHHHh-CCHHHHHHHH
Confidence 55556 5899999999987 7788998885
No 17
>PHA02874 ankyrin repeat protein; Provisional
Probab=97.41 E-value=0.00044 Score=77.92 Aligned_cols=66 Identities=24% Similarity=0.180 Sum_probs=38.5
Q ss_pred hchHHHHHHHcCChhHHHHHHhhccc--CC--CCCC-------------Cc----cccCCCCCCCCCCchhhhhcccCCh
Q 002028 889 EIQLLNRAVKMKCRRMVDLLIHYSLT--SS--NDTP-------------QK----YIFPPNLAGPGGITPLHLAACTSDS 947 (978)
Q Consensus 889 e~~LLH~AV~~~s~~mVelLL~~~~~--~~--~~~~-------------~~----y~F~pd~~GpsGlTPLHIAAs~~g~ 947 (978)
+.|+||+||+.++.++|++|+.+... .. +|.. .. ..-+++..+..|+||||+||.. |.
T Consensus 124 g~T~Lh~A~~~~~~~~v~~Ll~~gad~n~~d~~g~tpLh~A~~~~~~~iv~~Ll~~g~~~n~~~~~g~tpL~~A~~~-g~ 202 (434)
T PHA02874 124 LKTFLHYAIKKGDLESIKMLFEYGADVNIEDDNGCYPIHIAIKHNFFDIIKLLLEKGAYANVKDNNGESPLHNAAEY-GD 202 (434)
T ss_pred CccHHHHHHHCCCHHHHHHHHhCCCCCCCcCCCCCCHHHHHHHCCcHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHc-CC
Confidence 45777777777777777777765431 01 1100 00 1123445566777777777766 66
Q ss_pred hHHHHHhh
Q 002028 948 DDIIDALT 955 (978)
Q Consensus 948 ~~vldaLt 955 (978)
.+++..|.
T Consensus 203 ~~iv~~Ll 210 (434)
T PHA02874 203 YACIKLLI 210 (434)
T ss_pred HHHHHHHH
Confidence 67777773
No 18
>PHA02875 ankyrin repeat protein; Provisional
Probab=97.39 E-value=0.0004 Score=77.18 Aligned_cols=87 Identities=24% Similarity=0.259 Sum_probs=64.8
Q ss_pred HHHHHHhccchHHHHHHHHHHHHhccccCCCccHHHHHHhhhchHHHHHHHcCChhHHHHHHhhcccCCCCCCCccccCC
Q 002028 848 FLLVFSVDRGCCALVKAILDILVEGNLSMDGLSRESLEMLWEIQLLNRAVKMKCRRMVDLLIHYSLTSSNDTPQKYIFPP 927 (978)
Q Consensus 848 ~LL~FAverdWcAVvkkLLdiL~~g~v~~~~~s~~~~~~l~e~~LLH~AV~~~s~~mVelLL~~~~~~~~~~~~~y~F~p 927 (978)
..|-+|+..+=..+++.||+.- ....+... -.+.||||+|+..++.++|++|+.+. -+|
T Consensus 70 t~L~~A~~~g~~~~v~~Ll~~~---~~~~~~~~------~~g~tpL~~A~~~~~~~iv~~Ll~~g------------ad~ 128 (413)
T PHA02875 70 SELHDAVEEGDVKAVEELLDLG---KFADDVFY------KDGMTPLHLATILKKLDIMKLLIARG------------ADP 128 (413)
T ss_pred cHHHHHHHCCCHHHHHHHHHcC---Cccccccc------CCCCCHHHHHHHhCCHHHHHHHHhCC------------CCC
Confidence 4577888888888888887632 11101000 13679999999999999999999874 346
Q ss_pred CCCCCCCCchhhhhcccCChhHHHHHhhc
Q 002028 928 NLAGPGGITPLHLAACTSDSDDIIDALTN 956 (978)
Q Consensus 928 d~~GpsGlTPLHIAAs~~g~~~vldaLt~ 956 (978)
+..+..|.||||+|+.. +..++++.|.+
T Consensus 129 ~~~~~~g~tpLh~A~~~-~~~~~v~~Ll~ 156 (413)
T PHA02875 129 DIPNTDKFSPLHLAVMM-GDIKGIELLID 156 (413)
T ss_pred CCCCCCCCCHHHHHHHc-CCHHHHHHHHh
Confidence 67788999999999987 77888988843
No 19
>KOG4412 consensus 26S proteasome regulatory complex, subunit PSMD10 [Posttranslational modification, protein turnover, chaperones]
Probab=97.36 E-value=0.00026 Score=73.84 Aligned_cols=82 Identities=22% Similarity=0.317 Sum_probs=61.1
Q ss_pred HHHHhccchHHHHHHHHHHHHhccccCCCccHHHHHHhhhchHHHHHHHcCChhHHHHHHhhcccCCCCCCCccccCCCC
Q 002028 850 LVFSVDRGCCALVKAILDILVEGNLSMDGLSRESLEMLWEIQLLNRAVKMKCRRMVDLLIHYSLTSSNDTPQKYIFPPNL 929 (978)
Q Consensus 850 L~FAverdWcAVvkkLLdiL~~g~v~~~~~s~~~~~~l~e~~LLH~AV~~~s~~mVelLL~~~~~~~~~~~~~y~F~pd~ 929 (978)
|-||.-.+|-.|+.+||+--.. +... +.. +-||||||+.-++.+|+++|+.+.. ..|+
T Consensus 110 LHyAagK~r~eIaqlLle~ga~--i~~k-------D~~-~qtplHRAAavGklkvie~Li~~~a------------~~n~ 167 (226)
T KOG4412|consen 110 LHYAAGKGRLEIAQLLLEKGAL--IRIK-------DKQ-GQTPLHRAAAVGKLKVIEYLISQGA------------PLNT 167 (226)
T ss_pred ehhhhcCChhhHHHHHHhcCCC--Cccc-------ccc-cCchhHHHHhccchhhHHHHHhcCC------------CCCc
Confidence 5677888888888888774311 2222 223 6799999999999999999997752 2457
Q ss_pred CCCCCCchhhhhcccCChhHHHHHh
Q 002028 930 AGPGGITPLHLAACTSDSDDIIDAL 954 (978)
Q Consensus 930 ~GpsGlTPLHIAAs~~g~~~vldaL 954 (978)
.+--||||||.|-+ +|-.++.-+|
T Consensus 168 qDk~G~TpL~~al~-e~~~d~a~lL 191 (226)
T KOG4412|consen 168 QDKYGFTPLHHALA-EGHPDVAVLL 191 (226)
T ss_pred ccccCccHHHHHHh-ccCchHHHHH
Confidence 78999999999943 3666776666
No 20
>PHA02795 ankyrin-like protein; Provisional
Probab=97.31 E-value=0.00059 Score=78.96 Aligned_cols=58 Identities=24% Similarity=0.249 Sum_probs=48.3
Q ss_pred hchHHHHHHHcCChhHHHHHHhhcccCCCCCCCccccCCCCCCCCCCchhhhhcccC-------ChhHHHHHhhcCc
Q 002028 889 EIQLLNRAVKMKCRRMVDLLIHYSLTSSNDTPQKYIFPPNLAGPGGITPLHLAACTS-------DSDDIIDALTNDP 958 (978)
Q Consensus 889 e~~LLH~AV~~~s~~mVelLL~~~~~~~~~~~~~y~F~pd~~GpsGlTPLHIAAs~~-------g~~~vldaLt~DP 958 (978)
+.||||+|+..++.++|++||... -++++.+..|+||||+||... +..+|+++|.+.+
T Consensus 221 G~TpLh~Aa~~g~~eiVelLL~~G------------AdIN~~d~~G~TpLh~Aa~~g~~~~~~~~~~eIvelLL~~g 285 (437)
T PHA02795 221 GRTLLYRAIYAGYIDLVSWLLENG------------ANVNAVMSNGYTCLDVAVDRGSVIARRETHLKILEILLREP 285 (437)
T ss_pred CCCHHHHHHHcCCHHHHHHHHHCC------------CCCCCcCCCCCCHHHHHHHcCCcccccccHHHHHHHHHhCC
Confidence 579999999999999999999774 346777899999999999873 1368999996543
No 21
>PHA02878 ankyrin repeat protein; Provisional
Probab=97.26 E-value=0.00062 Score=77.71 Aligned_cols=55 Identities=25% Similarity=0.324 Sum_probs=48.0
Q ss_pred hchHHHHHHHcCChhHHHHHHhhcccCCCCCCCccccCCCCCCCCCCchhhhhcccCChhHHHHHhhc
Q 002028 889 EIQLLNRAVKMKCRRMVDLLIHYSLTSSNDTPQKYIFPPNLAGPGGITPLHLAACTSDSDDIIDALTN 956 (978)
Q Consensus 889 e~~LLH~AV~~~s~~mVelLL~~~~~~~~~~~~~y~F~pd~~GpsGlTPLHIAAs~~g~~~vldaLt~ 956 (978)
+.||||+|+..++.++|++||.+. -+++..+..|.||||+||.. +..++++.|.+
T Consensus 168 g~tpLh~A~~~~~~~iv~~Ll~~g------------ad~n~~d~~g~tpLh~A~~~-~~~~iv~~Ll~ 222 (477)
T PHA02878 168 GNTALHYATENKDQRLTELLLSYG------------ANVNIPDKTNNSPLHHAVKH-YNKPIVHILLE 222 (477)
T ss_pred CCCHHHHHHhCCCHHHHHHHHHCC------------CCCCCcCCCCCCHHHHHHHh-CCHHHHHHHHH
Confidence 679999999999999999999874 24667788999999999987 88899999943
No 22
>PHA03095 ankyrin-like protein; Provisional
Probab=97.25 E-value=0.00063 Score=76.38 Aligned_cols=85 Identities=19% Similarity=0.196 Sum_probs=60.1
Q ss_pred HHHHHhccchHHHHHHHHHHHHhccccCCCccHHHHHHhhhchHHHHHHHcCChhHHHHHHhhcccCCCCCCCccccCCC
Q 002028 849 LLVFSVDRGCCALVKAILDILVEGNLSMDGLSRESLEMLWEIQLLNRAVKMKCRRMVDLLIHYSLTSSNDTPQKYIFPPN 928 (978)
Q Consensus 849 LL~FAverdWcAVvkkLLdiL~~g~v~~~~~s~~~~~~l~e~~LLH~AV~~~s~~mVelLL~~~~~~~~~~~~~y~F~pd 928 (978)
.|-+|+..+.|.. .++..|.+.+.+.+... ..+.||||+||+.++.++|++||... -+++
T Consensus 225 pLh~Aa~~~~~~~--~~v~~ll~~g~din~~d------~~g~TpLh~A~~~~~~~~v~~LL~~g------------ad~n 284 (471)
T PHA03095 225 PLHSMATGSSCKR--SLVLPLLIAGISINARN------RYGQTPLHYAAVFNNPRACRRLIALG------------ADIN 284 (471)
T ss_pred HHHHHHhcCCchH--HHHHHHHHcCCCCCCcC------CCCCCHHHHHHHcCCHHHHHHHHHcC------------CCCc
Confidence 3445555555421 12223334445544332 24789999999999999999999763 4578
Q ss_pred CCCCCCCchhhhhcccCChhHHHHHh
Q 002028 929 LAGPGGITPLHLAACTSDSDDIIDAL 954 (978)
Q Consensus 929 ~~GpsGlTPLHIAAs~~g~~~vldaL 954 (978)
+.+..|.||||+|+.. +..+++..|
T Consensus 285 ~~~~~g~tpl~~A~~~-~~~~~v~~L 309 (471)
T PHA03095 285 AVSSDGNTPLSLMVRN-NNGRAVRAA 309 (471)
T ss_pred ccCCCCCCHHHHHHHh-CCHHHHHHH
Confidence 8899999999999987 777788877
No 23
>PHA02874 ankyrin repeat protein; Provisional
Probab=97.24 E-value=0.00075 Score=76.05 Aligned_cols=52 Identities=25% Similarity=0.203 Sum_probs=34.0
Q ss_pred hchHHHHHHHcCChhHHHHHHhhcccCCCCCCCccccCCCCCCCCCCchhhhhcccCChhHHHHHh
Q 002028 889 EIQLLNRAVKMKCRRMVDLLIHYSLTSSNDTPQKYIFPPNLAGPGGITPLHLAACTSDSDDIIDAL 954 (978)
Q Consensus 889 e~~LLH~AV~~~s~~mVelLL~~~~~~~~~~~~~y~F~pd~~GpsGlTPLHIAAs~~g~~~vldaL 954 (978)
+.||||.|++.++.+||++|+.+. -+++.....|.||||+|+.. + ..++..|
T Consensus 190 g~tpL~~A~~~g~~~iv~~Ll~~g------------~~i~~~~~~g~TpL~~A~~~-~-~~~i~~L 241 (434)
T PHA02874 190 GESPLHNAAEYGDYACIKLLIDHG------------NHIMNKCKNGFTPLHNAIIH-N-RSAIELL 241 (434)
T ss_pred CCCHHHHHHHcCCHHHHHHHHhCC------------CCCcCCCCCCCCHHHHHHHC-C-hHHHHHH
Confidence 346666666666666666666553 22445577899999999976 3 3455665
No 24
>PHA02859 ankyrin repeat protein; Provisional
Probab=97.21 E-value=0.00094 Score=69.04 Aligned_cols=54 Identities=17% Similarity=0.264 Sum_probs=31.9
Q ss_pred hchHHHHHHHcC---ChhHHHHHHhhcccCCCCCCCccccCCCCCCCCCCchhhhhcc-cCChhHHHHHh
Q 002028 889 EIQLLNRAVKMK---CRRMVDLLIHYSLTSSNDTPQKYIFPPNLAGPGGITPLHLAAC-TSDSDDIIDAL 954 (978)
Q Consensus 889 e~~LLH~AV~~~---s~~mVelLL~~~~~~~~~~~~~y~F~pd~~GpsGlTPLHIAAs-~~g~~~vldaL 954 (978)
+.||||+|+..+ ..++|++|+.+. -+++..+..|.||||+|+. ..+..++++.|
T Consensus 87 g~TpLh~a~~~~~~~~~eiv~~Ll~~g------------adin~~d~~G~TpLh~a~~~~~~~~~iv~~L 144 (209)
T PHA02859 87 NLSALHHYLSFNKNVEPEILKILIDSG------------SSITEEDEDGKNLLHMYMCNFNVRINVIKLL 144 (209)
T ss_pred CCCHHHHHHHhCccccHHHHHHHHHCC------------CCCCCcCCCCCCHHHHHHHhccCCHHHHHHH
Confidence 345555555432 455555555442 3456667777888887754 34566777777
No 25
>PHA02798 ankyrin-like protein; Provisional
Probab=97.19 E-value=0.00094 Score=76.73 Aligned_cols=60 Identities=20% Similarity=0.224 Sum_probs=50.2
Q ss_pred hhchHHHHHHHcCChhHHHHHHhhcccCCCCCCCccccCCCCCCCCCCchhhhhcccCChhHHHHHh-hcCcch
Q 002028 888 WEIQLLNRAVKMKCRRMVDLLIHYSLTSSNDTPQKYIFPPNLAGPGGITPLHLAACTSDSDDIIDAL-TNDPQE 960 (978)
Q Consensus 888 ~e~~LLH~AV~~~s~~mVelLL~~~~~~~~~~~~~y~F~pd~~GpsGlTPLHIAAs~~g~~~vldaL-t~DP~~ 960 (978)
.+.||||.||..++.++|++||.+. -++++.+..|.||||+|+.. +..+++..| ...|..
T Consensus 257 ~G~TPL~~A~~~~~~~~v~~LL~~G------------Adin~~d~~G~TpL~~A~~~-~~~~iv~~lL~~~~~~ 317 (489)
T PHA02798 257 LGFNPLYYSVSHNNRKIFEYLLQLG------------GDINIITELGNTCLFTAFEN-ESKFIFNSILNKKPNK 317 (489)
T ss_pred CCccHHHHHHHcCcHHHHHHHHHcC------------CcccccCCCCCcHHHHHHHc-CcHHHHHHHHccCCCH
Confidence 3789999999999999999999874 45788899999999999876 778888887 444443
No 26
>KOG0509 consensus Ankyrin repeat and DHHC-type Zn-finger domain containing proteins [General function prediction only]
Probab=97.18 E-value=0.00041 Score=82.09 Aligned_cols=67 Identities=22% Similarity=0.121 Sum_probs=45.5
Q ss_pred hchHHHHHHHcCChhHHHHHHhhcc--cCCCCCC-----------C--------ccccCCCCCCCCCCchhhhhcccCCh
Q 002028 889 EIQLLNRAVKMKCRRMVDLLIHYSL--TSSNDTP-----------Q--------KYIFPPNLAGPGGITPLHLAACTSDS 947 (978)
Q Consensus 889 e~~LLH~AV~~~s~~mVelLL~~~~--~~~~~~~-----------~--------~y~F~pd~~GpsGlTPLHIAAs~~g~ 947 (978)
+-||||||+|+++..||++||.... ...|... + ...-++|+.|..|-||||.||-...+
T Consensus 112 ~stPLHWAar~G~~~vv~lLlqhGAdpt~~D~~G~~~lHla~~~~~~~~vayll~~~~d~d~~D~~grTpLmwAaykg~~ 191 (600)
T KOG0509|consen 112 GSTPLHWAARNGHISVVDLLLQHGADPTLKDKQGLTPLHLAAQFGHTALVAYLLSKGADIDLRDNNGRTPLMWAAYKGFA 191 (600)
T ss_pred CCCcchHHHHcCcHHHHHHHHHcCCCCceecCCCCcHHHHHHHhCchHHHHHHHHhcccCCCcCCCCCCHHHHHHHhccc
Confidence 5699999999999999999999764 2222211 0 01156677788888888888877555
Q ss_pred hHHHHHhh
Q 002028 948 DDIIDALT 955 (978)
Q Consensus 948 ~~vldaLt 955 (978)
..+.-+|+
T Consensus 192 ~~v~~LL~ 199 (600)
T KOG0509|consen 192 LFVRRLLK 199 (600)
T ss_pred HHHHHHHH
Confidence 55444443
No 27
>PHA02989 ankyrin repeat protein; Provisional
Probab=97.12 E-value=0.0012 Score=76.00 Aligned_cols=61 Identities=15% Similarity=0.088 Sum_probs=51.0
Q ss_pred hhchHHHHHHHcCChhHHHHHHhhcccCCCCCCCccccCCCCCCCCCCchhhhhcccCChhHHHHHh-hcCcchh
Q 002028 888 WEIQLLNRAVKMKCRRMVDLLIHYSLTSSNDTPQKYIFPPNLAGPGGITPLHLAACTSDSDDIIDAL-TNDPQEV 961 (978)
Q Consensus 888 ~e~~LLH~AV~~~s~~mVelLL~~~~~~~~~~~~~y~F~pd~~GpsGlTPLHIAAs~~g~~~vldaL-t~DP~~v 961 (978)
.+.||||+|+..++.++|++||... -++++.+..|.||||+|+.. +..+|++.| ...|...
T Consensus 255 ~G~TpL~~Aa~~~~~~~v~~LL~~G------------adin~~d~~G~TpL~~A~~~-~~~~iv~~LL~~~p~~~ 316 (494)
T PHA02989 255 KGFNPLLISAKVDNYEAFNYLLKLG------------DDIYNVSKDGDTVLTYAIKH-GNIDMLNRILQLKPGKY 316 (494)
T ss_pred CCCCHHHHHHHhcCHHHHHHHHHcC------------CCccccCCCCCCHHHHHHHc-CCHHHHHHHHhcCCChH
Confidence 3789999999999999999999874 35777889999999999887 788888887 5555433
No 28
>PHA03100 ankyrin repeat protein; Provisional
Probab=97.08 E-value=0.0011 Score=74.66 Aligned_cols=85 Identities=22% Similarity=0.264 Sum_probs=64.5
Q ss_pred HHHHHHh--ccchHHHHHHHHHHHHhccccCCCccHHHHHHhhhchHHHHHHHcC--ChhHHHHHHhhcccCCCCCCCcc
Q 002028 848 FLLVFSV--DRGCCALVKAILDILVEGNLSMDGLSRESLEMLWEIQLLNRAVKMK--CRRMVDLLIHYSLTSSNDTPQKY 923 (978)
Q Consensus 848 ~LL~FAv--erdWcAVvkkLLdiL~~g~v~~~~~s~~~~~~l~e~~LLH~AV~~~--s~~mVelLL~~~~~~~~~~~~~y 923 (978)
..|-+|+ ..+-..+++.||+- +.+..... ..+.++||.|++.+ +.+||++|+...
T Consensus 108 tpL~~A~~~~~~~~~iv~~Ll~~----g~~~~~~~------~~g~t~L~~A~~~~~~~~~iv~~Ll~~g----------- 166 (480)
T PHA03100 108 TPLLYAISKKSNSYSIVEYLLDN----GANVNIKN------SDGENLLHLYLESNKIDLKILKLLIDKG----------- 166 (480)
T ss_pred chhhHHHhcccChHHHHHHHHHc----CCCCCccC------CCCCcHHHHHHHcCCChHHHHHHHHHCC-----------
Confidence 4566777 88888888888763 22222221 14679999999999 999999999764
Q ss_pred ccCCCCCCCCCCchhhhhcccCChhHHHHHhh
Q 002028 924 IFPPNLAGPGGITPLHLAACTSDSDDIIDALT 955 (978)
Q Consensus 924 ~F~pd~~GpsGlTPLHIAAs~~g~~~vldaLt 955 (978)
.+++..+..|.||||+|+.. +..++++.|.
T Consensus 167 -~din~~d~~g~tpL~~A~~~-~~~~iv~~Ll 196 (480)
T PHA03100 167 -VDINAKNRYGYTPLHIAVEK-GNIDVIKFLL 196 (480)
T ss_pred -CCcccccCCCCCHHHHHHHh-CCHHHHHHHH
Confidence 34556677999999999998 7889999993
No 29
>PLN03192 Voltage-dependent potassium channel; Provisional
Probab=97.06 E-value=0.0011 Score=81.43 Aligned_cols=82 Identities=21% Similarity=0.179 Sum_probs=61.7
Q ss_pred HHHHhccchHHHHHHHHHHHHhccccCCCccHHHHHHhhhchHHHHHHHcCChhHHHHHHhhcccCCCCCCCccccCCCC
Q 002028 850 LVFSVDRGCCALVKAILDILVEGNLSMDGLSRESLEMLWEIQLLNRAVKMKCRRMVDLLIHYSLTSSNDTPQKYIFPPNL 929 (978)
Q Consensus 850 L~FAverdWcAVvkkLLdiL~~g~v~~~~~s~~~~~~l~e~~LLH~AV~~~s~~mVelLL~~~~~~~~~~~~~y~F~pd~ 929 (978)
|-.|+.++=..+++.||. .+.+.+.... .+.|+||.|++.++.++|++||.+. -+++.
T Consensus 529 L~~Aa~~g~~~~l~~Ll~----~G~d~n~~d~------~G~TpLh~Aa~~g~~~~v~~Ll~~g------------adin~ 586 (823)
T PLN03192 529 LLTVASTGNAALLEELLK----AKLDPDIGDS------KGRTPLHIAASKGYEDCVLVLLKHA------------CNVHI 586 (823)
T ss_pred HHHHHHcCCHHHHHHHHH----CCCCCCCCCC------CCCCHHHHHHHcChHHHHHHHHhcC------------CCCCC
Confidence 444556676777777774 3444343322 4789999999999999999999874 34667
Q ss_pred CCCCCCchhhhhcccCChhHHHHHh
Q 002028 930 AGPGGITPLHLAACTSDSDDIIDAL 954 (978)
Q Consensus 930 ~GpsGlTPLHIAAs~~g~~~vldaL 954 (978)
.+..|+||||.||.. |..+|++.|
T Consensus 587 ~d~~G~TpL~~A~~~-g~~~iv~~L 610 (823)
T PLN03192 587 RDANGNTALWNAISA-KHHKIFRIL 610 (823)
T ss_pred cCCCCCCHHHHHHHh-CCHHHHHHH
Confidence 788899999999987 777888887
No 30
>PHA03100 ankyrin repeat protein; Provisional
Probab=97.05 E-value=0.0029 Score=71.45 Aligned_cols=86 Identities=22% Similarity=0.278 Sum_probs=66.0
Q ss_pred HHHHHHHhccch--HHHHHHHHHHHHhccccCCCccHHHHHHhhhchHHHHHHHcCChhHHHHHHhhcccCCCCCCCccc
Q 002028 847 KFLLVFSVDRGC--CALVKAILDILVEGNLSMDGLSRESLEMLWEIQLLNRAVKMKCRRMVDLLIHYSLTSSNDTPQKYI 924 (978)
Q Consensus 847 k~LL~FAverdW--cAVvkkLLdiL~~g~v~~~~~s~~~~~~l~e~~LLH~AV~~~s~~mVelLL~~~~~~~~~~~~~y~ 924 (978)
...|.+|+..+- ..+++.||.. +.+..... ..+.||||+||+.++.++|++|+.+.
T Consensus 216 ~t~l~~a~~~~~~~~~iv~~Ll~~----g~din~~d------~~g~TpL~~A~~~~~~~iv~~Ll~~g------------ 273 (480)
T PHA03100 216 ETPLHIAACYNEITLEVVNYLLSY----GVPINIKD------VYGFTPLHYAVYNNNPEFVKYLLDLG------------ 273 (480)
T ss_pred HhHHHHHHHhCcCcHHHHHHHHHc----CCCCCCCC------CCCCCHHHHHHHcCCHHHHHHHHHcC------------
Confidence 567778887777 7777777653 23333222 14779999999999999999999874
Q ss_pred cCCCCCCCCCCchhhhhcccCChhHHHHHhh
Q 002028 925 FPPNLAGPGGITPLHLAACTSDSDDIIDALT 955 (978)
Q Consensus 925 F~pd~~GpsGlTPLHIAAs~~g~~~vldaLt 955 (978)
-++++.+..|.||||+|+.. +..+++..|.
T Consensus 274 ad~n~~d~~g~tpl~~A~~~-~~~~iv~~Ll 303 (480)
T PHA03100 274 ANPNLVNKYGDTPLHIAILN-NNKEIFKLLL 303 (480)
T ss_pred CCCCccCCCCCcHHHHHHHh-CCHHHHHHHH
Confidence 25778899999999999876 7788888883
No 31
>PHA02859 ankyrin repeat protein; Provisional
Probab=97.02 E-value=0.0014 Score=67.80 Aligned_cols=74 Identities=20% Similarity=0.086 Sum_probs=54.6
Q ss_pred HHHHHHHhccccCCCccHHHHHHhhhchHHHHHHHc--CChhHHHHHHhhcccCCCCCCCccccCCCCCCCCCCchhhhh
Q 002028 864 AILDILVEGNLSMDGLSRESLEMLWEIQLLNRAVKM--KCRRMVDLLIHYSLTSSNDTPQKYIFPPNLAGPGGITPLHLA 941 (978)
Q Consensus 864 kLLdiL~~g~v~~~~~s~~~~~~l~e~~LLH~AV~~--~s~~mVelLL~~~~~~~~~~~~~y~F~pd~~GpsGlTPLHIA 941 (978)
.++.+|.+.+.+.+.... .+.||||+|++. ++.++|++|+.+. -+++..+..|.||||+|
T Consensus 104 eiv~~Ll~~gadin~~d~------~G~TpLh~a~~~~~~~~~iv~~Li~~g------------adin~~d~~g~t~Lh~~ 165 (209)
T PHA02859 104 EILKILIDSGSSITEEDE------DGKNLLHMYMCNFNVRINVIKLLIDSG------------VSFLNKDFDNNNILYSY 165 (209)
T ss_pred HHHHHHHHCCCCCCCcCC------CCCCHHHHHHHhccCCHHHHHHHHHcC------------CCcccccCCCCcHHHHH
Confidence 344455555555443321 468999999974 5799999999774 34667789999999998
Q ss_pred cccCChhHHHHHhh
Q 002028 942 ACTSDSDDIIDALT 955 (978)
Q Consensus 942 As~~g~~~vldaLt 955 (978)
|...+..+|++.|.
T Consensus 166 a~~~~~~~iv~~Ll 179 (209)
T PHA02859 166 ILFHSDKKIFDFLT 179 (209)
T ss_pred HHhcCCHHHHHHHH
Confidence 77778889999884
No 32
>PHA02884 ankyrin repeat protein; Provisional
Probab=96.99 E-value=0.0015 Score=72.41 Aligned_cols=90 Identities=20% Similarity=0.172 Sum_probs=58.3
Q ss_pred HHHHHHHHhccchHHHHHHHHHHHHhccccCCCccHHHHHHhhhchHHHHHHHcCChhHHHHHHhhcccCCCCCCCcccc
Q 002028 846 FKFLLVFSVDRGCCALVKAILDILVEGNLSMDGLSRESLEMLWEIQLLNRAVKMKCRRMVDLLIHYSLTSSNDTPQKYIF 925 (978)
Q Consensus 846 Fk~LL~FAverdWcAVvkkLLdiL~~g~v~~~~~s~~~~~~l~e~~LLH~AV~~~s~~mVelLL~~~~~~~~~~~~~y~F 925 (978)
+..+|-.|+..+-..+++.||..- .+..... .+.--.+.||||+|++.++.++|++|+.+..
T Consensus 33 ~~~lL~~A~~~~~~eivk~LL~~G----AdiN~~~--~~sd~~g~TpLh~Aa~~~~~eivklLL~~GA------------ 94 (300)
T PHA02884 33 IANILYSSIKFHYTDIIDAILKLG----ADPEAPF--PLSENSKTNPLIYAIDCDNDDAAKLLIRYGA------------ 94 (300)
T ss_pred CCHHHHHHHHcCCHHHHHHHHHCC----CCccccC--cccCCCCCCHHHHHHHcCCHHHHHHHHHcCC------------
Confidence 456788888888888888777542 2222110 0000136799999999999999999998763
Q ss_pred CCCCC-CCCCCchhhhhcccCChhHHHHHh
Q 002028 926 PPNLA-GPGGITPLHLAACTSDSDDIIDAL 954 (978)
Q Consensus 926 ~pd~~-GpsGlTPLHIAAs~~g~~~vldaL 954 (978)
+++.. +..|.||||+||.. +..+++..|
T Consensus 95 DVN~~~~~~g~TpLh~Aa~~-~~~eivklL 123 (300)
T PHA02884 95 DVNRYAEEAKITPLYISVLH-GCLKCLEIL 123 (300)
T ss_pred CcCcccCCCCCCHHHHHHHc-CCHHHHHHH
Confidence 24432 34577777777655 555666666
No 33
>PTZ00322 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase; Provisional
Probab=96.97 E-value=0.0016 Score=78.48 Aligned_cols=83 Identities=20% Similarity=0.240 Sum_probs=62.9
Q ss_pred HHHHhccchHHHHHHHHHHHHhccccCCCccHHHHHHhhhchHHHHHHHcCChhHHHHHHhhcccCCCCCCCccccCCCC
Q 002028 850 LVFSVDRGCCALVKAILDILVEGNLSMDGLSRESLEMLWEIQLLNRAVKMKCRRMVDLLIHYSLTSSNDTPQKYIFPPNL 929 (978)
Q Consensus 850 L~FAverdWcAVvkkLLdiL~~g~v~~~~~s~~~~~~l~e~~LLH~AV~~~s~~mVelLL~~~~~~~~~~~~~y~F~pd~ 929 (978)
|..|+..+=..+++.||. .+.+.+... -.+.|+||+||..++.++|++||.+. -++++
T Consensus 86 L~~aa~~G~~~~vk~LL~----~Gadin~~d------~~G~TpLh~Aa~~g~~eiv~~LL~~G------------advn~ 143 (664)
T PTZ00322 86 LCQLAASGDAVGARILLT----GGADPNCRD------YDGRTPLHIACANGHVQVVRVLLEFG------------ADPTL 143 (664)
T ss_pred HHHHHHcCCHHHHHHHHH----CCCCCCCcC------CCCCcHHHHHHHCCCHHHHHHHHHCC------------CCCCC
Confidence 555666666777777765 233333221 14789999999999999999999874 34667
Q ss_pred CCCCCCchhhhhcccCChhHHHHHhh
Q 002028 930 AGPGGITPLHLAACTSDSDDIIDALT 955 (978)
Q Consensus 930 ~GpsGlTPLHIAAs~~g~~~vldaLt 955 (978)
.+..|+||||+|+.. +..+++.+|.
T Consensus 144 ~d~~G~TpLh~A~~~-g~~~iv~~Ll 168 (664)
T PTZ00322 144 LDKDGKTPLELAEEN-GFREVVQLLS 168 (664)
T ss_pred CCCCCCCHHHHHHHC-CcHHHHHHHH
Confidence 788999999999987 8888999984
No 34
>PHA02946 ankyin-like protein; Provisional
Probab=96.97 E-value=0.0016 Score=75.00 Aligned_cols=55 Identities=25% Similarity=0.232 Sum_probs=42.0
Q ss_pred hhchHHHHHHHcCChhHHHHHHhhcccCCCCCCCccccCCCCCCCCCCchhhhhcccC-ChhHHHHHh
Q 002028 888 WEIQLLNRAVKMKCRRMVDLLIHYSLTSSNDTPQKYIFPPNLAGPGGITPLHLAACTS-DSDDIIDAL 954 (978)
Q Consensus 888 ~e~~LLH~AV~~~s~~mVelLL~~~~~~~~~~~~~y~F~pd~~GpsGlTPLHIAAs~~-g~~~vldaL 954 (978)
.+.||||+|++.++.++|++||.... +++..+..|.||||+|+... +..+++++|
T Consensus 71 ~G~TpLh~Aa~~g~~eiv~lLL~~GA------------din~~d~~g~TpLh~A~~~~~~~~e~v~lL 126 (446)
T PHA02946 71 DGNYPLHIASKINNNRIVAMLLTHGA------------DPNACDKQHKTPLYYLSGTDDEVIERINLL 126 (446)
T ss_pred CCCCHHHHHHHcCCHHHHHHHHHCcC------------CCCCCCCCCCCHHHHHHHcCCchHHHHHHH
Confidence 47899999999999999999998742 25556777888888876653 245666666
No 35
>PHA03095 ankyrin-like protein; Provisional
Probab=96.90 E-value=0.0022 Score=72.09 Aligned_cols=84 Identities=19% Similarity=0.209 Sum_probs=46.7
Q ss_pred HHHHHhccc---hHHHHHHHHHHHHhccccCCCccHHHHHHhhhchHHHHHHHcC-ChhHHHHHHhhcccCCCCCCCccc
Q 002028 849 LLVFSVDRG---CCALVKAILDILVEGNLSMDGLSRESLEMLWEIQLLNRAVKMK-CRRMVDLLIHYSLTSSNDTPQKYI 924 (978)
Q Consensus 849 LL~FAverd---WcAVvkkLLdiL~~g~v~~~~~s~~~~~~l~e~~LLH~AV~~~-s~~mVelLL~~~~~~~~~~~~~y~ 924 (978)
.|-+|+..+ -..+++.||+ -+.+.+.... .+.||||+|+..+ ..+||++|+...
T Consensus 50 ~Lh~a~~~~~~~~~~iv~~Ll~----~Gadin~~~~------~g~TpLh~A~~~~~~~~iv~lLl~~g------------ 107 (471)
T PHA03095 50 PLHLYLHYSSEKVKDIVRLLLE----AGADVNAPER------CGFTPLHLYLYNATTLDVIKLLIKAG------------ 107 (471)
T ss_pred HHHHHHHhcCCChHHHHHHHHH----CCCCCCCCCC------CCCCHHHHHHHcCCcHHHHHHHHHcC------------
Confidence 444455544 5555555553 3333332221 4678888888888 588888888664
Q ss_pred cCCCCCCCCCCchhhhhccc-CChhHHHHHh
Q 002028 925 FPPNLAGPGGITPLHLAACT-SDSDDIIDAL 954 (978)
Q Consensus 925 F~pd~~GpsGlTPLHIAAs~-~g~~~vldaL 954 (978)
.+++..+..|.||||+|+.. .+..++++.|
T Consensus 108 a~in~~~~~g~tpLh~a~~~~~~~~~iv~~L 138 (471)
T PHA03095 108 ADVNAKDKVGRTPLHVYLSGFNINPKVIRLL 138 (471)
T ss_pred CCCCCCCCCCCCHHHHHhhCCcCCHHHHHHH
Confidence 23444455566666666632 2344555555
No 36
>PHA02730 ankyrin-like protein; Provisional
Probab=96.86 E-value=0.0011 Score=80.05 Aligned_cols=57 Identities=23% Similarity=0.280 Sum_probs=47.0
Q ss_pred hhchHHHHHHHcCC---hhHHHHHHhhcccCCCCCCCccccCCCCCCCCCCchhhhhcccC-ChhHHHHHhhc
Q 002028 888 WEIQLLNRAVKMKC---RRMVDLLIHYSLTSSNDTPQKYIFPPNLAGPGGITPLHLAACTS-DSDDIIDALTN 956 (978)
Q Consensus 888 ~e~~LLH~AV~~~s---~~mVelLL~~~~~~~~~~~~~y~F~pd~~GpsGlTPLHIAAs~~-g~~~vldaLt~ 956 (978)
.|.|+||+||..++ .+||++||... -++++.+-.|+||||+||... +..+|+.+|..
T Consensus 40 ~G~TaLh~A~~~~~~~~~eivklLLs~G------------Adin~kD~~G~TPLh~Aa~~~~~~~eIv~~Ll~ 100 (672)
T PHA02730 40 RGNNALHCYVSNKCDTDIKIVRLLLSRG------------VERLCRNNEGLTPLGVYSKRKYVKSQIVHLLIS 100 (672)
T ss_pred CCCcHHHHHHHcCCcCcHHHHHHHHhCC------------CCCcccCCCCCChHHHHHHcCCCcHHHHHHHHh
Confidence 36799999999974 99999999764 346677899999999998764 47899999943
No 37
>PLN03192 Voltage-dependent potassium channel; Provisional
Probab=96.81 E-value=0.002 Score=79.13 Aligned_cols=82 Identities=18% Similarity=0.179 Sum_probs=56.0
Q ss_pred HHHHHhccchHHHHHHHHHHHHhccccCCCccHHHHHHhhhchHHHHHHHcCChhHHHHHHhhcccCCCCCCCccccCCC
Q 002028 849 LLVFSVDRGCCALVKAILDILVEGNLSMDGLSRESLEMLWEIQLLNRAVKMKCRRMVDLLIHYSLTSSNDTPQKYIFPPN 928 (978)
Q Consensus 849 LL~FAverdWcAVvkkLLdiL~~g~v~~~~~s~~~~~~l~e~~LLH~AV~~~s~~mVelLL~~~~~~~~~~~~~y~F~pd 928 (978)
-|-+|+..+...+++.|+..- ... +. -.+-++||+||++|+.++|++||.+. -+++
T Consensus 594 pL~~A~~~g~~~iv~~L~~~~---~~~-~~--------~~~~~~L~~Aa~~g~~~~v~~Ll~~G------------adin 649 (823)
T PLN03192 594 ALWNAISAKHHKIFRILYHFA---SIS-DP--------HAAGDLLCTAAKRNDLTAMKELLKQG------------LNVD 649 (823)
T ss_pred HHHHHHHhCCHHHHHHHHhcC---ccc-Cc--------ccCchHHHHHHHhCCHHHHHHHHHCC------------CCCC
Confidence 345566666666666655311 100 00 11336788888888888888888663 3577
Q ss_pred CCCCCCCchhhhhcccCChhHHHHHhh
Q 002028 929 LAGPGGITPLHLAACTSDSDDIIDALT 955 (978)
Q Consensus 929 ~~GpsGlTPLHIAAs~~g~~~vldaLt 955 (978)
..+..|+||||+|+.. |..+++..|.
T Consensus 650 ~~d~~G~TpLh~A~~~-g~~~iv~~Ll 675 (823)
T PLN03192 650 SEDHQGATALQVAMAE-DHVDMVRLLI 675 (823)
T ss_pred CCCCCCCCHHHHHHHC-CcHHHHHHHH
Confidence 8899999999999987 8889999994
No 38
>COG0666 Arp FOG: Ankyrin repeat [General function prediction only]
Probab=96.80 E-value=0.0017 Score=62.58 Aligned_cols=58 Identities=28% Similarity=0.234 Sum_probs=46.4
Q ss_pred hhchHHHHHHHcCC-----hhHHHHHHhhcccCCCCCCCccccCCCCCCCCCCchhhhhcccCChhHHHHHhh
Q 002028 888 WEIQLLNRAVKMKC-----RRMVDLLIHYSLTSSNDTPQKYIFPPNLAGPGGITPLHLAACTSDSDDIIDALT 955 (978)
Q Consensus 888 ~e~~LLH~AV~~~s-----~~mVelLL~~~~~~~~~~~~~y~F~pd~~GpsGlTPLHIAAs~~g~~~vldaLt 955 (978)
.+.|+||+|+..++ .++|++||..... .-.++..+..|+||||+|+.. |..+++.+|.
T Consensus 105 ~g~t~l~~a~~~~~~~~~~~~~~~~ll~~g~~---------~~~~~~~~~~g~tpl~~A~~~-~~~~~~~~ll 167 (235)
T COG0666 105 DGDTPLHLAALNGNPPEGNIEVAKLLLEAGAD---------LDVNNLRDEDGNTPLHWAALN-GDADIVELLL 167 (235)
T ss_pred CCCcHHHHHHhcCCcccchHHHHHHHHHcCCC---------CCCccccCCCCCchhHHHHHc-CchHHHHHHH
Confidence 47899999999999 9999999988621 123445589999999999999 5557888773
No 39
>KOG4177 consensus Ankyrin [Cell wall/membrane/envelope biogenesis]
Probab=96.70 E-value=0.0022 Score=81.02 Aligned_cols=71 Identities=28% Similarity=0.300 Sum_probs=46.8
Q ss_pred HHHHHHhccccCCCccHHHHHHhhhchHHHHHHHcCChhHHHHHHhhcccCCCCCCCccccCCCCCCCCCCchhhhhccc
Q 002028 865 ILDILVEGNLSMDGLSRESLEMLWEIQLLNRAVKMKCRRMVDLLIHYSLTSSNDTPQKYIFPPNLAGPGGITPLHLAACT 944 (978)
Q Consensus 865 LLdiL~~g~v~~~~~s~~~~~~l~e~~LLH~AV~~~s~~mVelLL~~~~~~~~~~~~~y~F~pd~~GpsGlTPLHIAAs~ 944 (978)
.+.++++.++..+.... -+-||||.||.+++.++|++||.... +..+.+..|+||||.||..
T Consensus 522 ~~~~l~~~ga~v~~~~~------r~~TpLh~A~~~g~v~~VkfLLe~gA------------dv~ak~~~G~TPLH~Aa~~ 583 (1143)
T KOG4177|consen 522 VAKILLEHGANVDLRTG------RGYTPLHVAVHYGNVDLVKFLLEHGA------------DVNAKDKLGYTPLHQAAQQ 583 (1143)
T ss_pred HHHHHhhcCCceehhcc------cccchHHHHHhcCCchHHHHhhhCCc------------cccccCCCCCChhhHHHHc
Confidence 44455555555333221 13488999999999999999987642 2234467778888887777
Q ss_pred CChhHHHHHh
Q 002028 945 SDSDDIIDAL 954 (978)
Q Consensus 945 ~g~~~vldaL 954 (978)
|-.+|+.+|
T Consensus 584 -G~~~i~~LL 592 (1143)
T KOG4177|consen 584 -GHNDIAELL 592 (1143)
T ss_pred -ChHHHHHHH
Confidence 566777777
No 40
>PHA02876 ankyrin repeat protein; Provisional
Probab=96.61 E-value=0.0049 Score=73.74 Aligned_cols=83 Identities=19% Similarity=0.292 Sum_probs=60.7
Q ss_pred HHHHHhccchHHHHHHHHHHHHhccccCCCccHHHHHHhhhchHHHHHHHcCChhHHHHHHhhcccCCCCCCCccccCCC
Q 002028 849 LLVFSVDRGCCALVKAILDILVEGNLSMDGLSRESLEMLWEIQLLNRAVKMKCRRMVDLLIHYSLTSSNDTPQKYIFPPN 928 (978)
Q Consensus 849 LL~FAverdWcAVvkkLLdiL~~g~v~~~~~s~~~~~~l~e~~LLH~AV~~~s~~mVelLL~~~~~~~~~~~~~y~F~pd 928 (978)
+|..++..+=..+++.||. .+.+.+.... .+.||||+||+.|+.++|++||.+. .+++
T Consensus 148 ~l~~~i~~~~~~i~k~Ll~----~Gadvn~~d~------~G~TpLh~Aa~~G~~~iv~~LL~~G------------ad~n 205 (682)
T PHA02876 148 LIKERIQQDELLIAEMLLE----GGADVNAKDI------YCITPIHYAAERGNAKMVNLLLSYG------------ADVN 205 (682)
T ss_pred HHHHHHHCCcHHHHHHHHh----CCCCCCCCCC------CCCCHHHHHHHCCCHHHHHHHHHCC------------CCcC
Confidence 4555566666666666654 4444333321 3789999999999999999999874 3355
Q ss_pred CCCCCCCchhhhhcccCChhHHHHHh
Q 002028 929 LAGPGGITPLHLAACTSDSDDIIDAL 954 (978)
Q Consensus 929 ~~GpsGlTPLHIAAs~~g~~~vldaL 954 (978)
.....|.||||+|+.. +..+++..|
T Consensus 206 ~~~~~g~t~L~~A~~~-~~~~ivk~L 230 (682)
T PHA02876 206 IIALDDLSVLECAVDS-KNIDTIKAI 230 (682)
T ss_pred ccCCCCCCHHHHHHHc-CCHHHHHHH
Confidence 6677899999999887 777888877
No 41
>PF12796 Ank_2: Ankyrin repeats (3 copies); InterPro: IPR020683 This entry represents the ankyrin repeat-containing domain. These domains contain multiple repeats of a beta(2)-alpha(2) motif. The ankyrin repeat is one of the most common protein-protein interaction motifs in nature. Ankyrin repeats are tandemly repeated modules of about 33 amino acids. They occur in a large number of functionally diverse proteins mainly from eukaryotes. The few known examples from prokaryotes and viruses may be the result of horizontal gene transfers []. The repeat has been found in proteins of diverse function such as transcriptional initiators, cell-cycle regulators, cytoskeletal, ion transporters and signal transducers. The ankyrin fold appears to be defined by its structure rather than its function since there is no specific sequence or structure which is universally recognised by it. The conserved fold of the ankyrin repeat unit is known from several crystal and solution structures [, , , ]. Each repeat folds into a helix-loop-helix structure with a beta-hairpin/loop region projecting out from the helices at a 90o angle. The repeats stack together to form an L-shaped structure [, ].; PDB: 3AAA_C 3F6Q_A 2KBX_A 3IXE_A 3TWR_D 3TWV_A 3TWT_B 3TWQ_A 3TWS_A 3TWX_B ....
Probab=96.58 E-value=0.0034 Score=55.19 Aligned_cols=47 Identities=28% Similarity=0.314 Sum_probs=39.2
Q ss_pred HHHHHHcCChhHHHHHHhhcccCCCCCCCccccCCCCCCCCCCchhhhhcccCChhHHHHHhhc
Q 002028 893 LNRAVKMKCRRMVDLLIHYSLTSSNDTPQKYIFPPNLAGPGGITPLHLAACTSDSDDIIDALTN 956 (978)
Q Consensus 893 LH~AV~~~s~~mVelLL~~~~~~~~~~~~~y~F~pd~~GpsGlTPLHIAAs~~g~~~vldaLt~ 956 (978)
||+||+.++.++|++|+...+ +.+. |-||||+||.. |..++++.|.+
T Consensus 1 L~~A~~~~~~~~~~~ll~~~~------------~~~~----~~~~l~~A~~~-~~~~~~~~Ll~ 47 (89)
T PF12796_consen 1 LHIAAQNGNLEILKFLLEKGA------------DINL----GNTALHYAAEN-GNLEIVKLLLE 47 (89)
T ss_dssp HHHHHHTTTHHHHHHHHHTTS------------TTTS----SSBHHHHHHHT-TTHHHHHHHHH
T ss_pred CHHHHHcCCHHHHHHHHHCcC------------CCCC----CCCHHHHHHHc-CCHHHHHHHHH
Confidence 899999999999999998542 2222 89999999988 88999999943
No 42
>PHA02946 ankyin-like protein; Provisional
Probab=96.43 E-value=0.0045 Score=71.30 Aligned_cols=81 Identities=22% Similarity=0.204 Sum_probs=64.8
Q ss_pred HHHHHHhccchHHHHHHHHHHHHhccccCCCccHHHHHHhhhchHHHHHHHcCChhHHHHHHhhcccCCCCCCCccccCC
Q 002028 848 FLLVFSVDRGCCALVKAILDILVEGNLSMDGLSRESLEMLWEIQLLNRAVKMKCRRMVDLLIHYSLTSSNDTPQKYIFPP 927 (978)
Q Consensus 848 ~LL~FAverdWcAVvkkLLdiL~~g~v~~~~~s~~~~~~l~e~~LLH~AV~~~s~~mVelLL~~~~~~~~~~~~~y~F~p 927 (978)
--|-+|+.++...+++.||.- |. .+.|+||+|+..++.+||++|+... +++
T Consensus 299 TpLh~Aa~~g~~eivk~Ll~~---~~--------------~~~t~L~~A~~~~~~~~v~~Ll~~g------------a~~ 349 (446)
T PHA02946 299 TDFKMAVEVGSIRCVKYLLDN---DI--------------ICEDAMYYAVLSEYETMVDYLLFNH------------FSV 349 (446)
T ss_pred CHHHHHHHcCCHHHHHHHHHC---CC--------------ccccHHHHHHHhCHHHHHHHHHHCC------------CCC
Confidence 457889999999999999962 11 1369999999999999999999663 446
Q ss_pred CCCCCCCCchhhhhcccCChhHHHHHh-hcCcc
Q 002028 928 NLAGPGGITPLHLAACTSDSDDIIDAL-TNDPQ 959 (978)
Q Consensus 928 d~~GpsGlTPLHIAAs~~g~~~vldaL-t~DP~ 959 (978)
+. .-.|.||||+|+.. +..+++++| .++|.
T Consensus 350 n~-~~~G~t~l~~a~~~-~~~~~~~~ll~~~~~ 380 (446)
T PHA02946 350 DS-VVNGHTCMSECVRL-NNPVILSKLMLHNPT 380 (446)
T ss_pred CC-ccccccHHHHHHHc-CCHHHHHHHHhcCcc
Confidence 65 35799999999977 778888888 66553
No 43
>PHA02736 Viral ankyrin protein; Provisional
Probab=96.43 E-value=0.0015 Score=63.52 Aligned_cols=56 Identities=23% Similarity=0.198 Sum_probs=43.9
Q ss_pred hhchHHHHHHHcCChh---HHHHHHhhcccCCCCCCCccccCCCCCC-CCCCchhhhhcccCChhHHHHHhhc
Q 002028 888 WEIQLLNRAVKMKCRR---MVDLLIHYSLTSSNDTPQKYIFPPNLAG-PGGITPLHLAACTSDSDDIIDALTN 956 (978)
Q Consensus 888 ~e~~LLH~AV~~~s~~---mVelLL~~~~~~~~~~~~~y~F~pd~~G-psGlTPLHIAAs~~g~~~vldaLt~ 956 (978)
.+.|+||.||+.++.+ +|++|+.+. .+.+... ..|.||||+|+.. +..+++..|..
T Consensus 54 ~g~t~Lh~a~~~~~~~~~e~v~~Ll~~g------------adin~~~~~~g~T~Lh~A~~~-~~~~i~~~Ll~ 113 (154)
T PHA02736 54 HGKQCVHIVSNPDKADPQEKLKLLMEWG------------ADINGKERVFGNTPLHIAVYT-QNYELATWLCN 113 (154)
T ss_pred CCCEEEEeecccCchhHHHHHHHHHHcC------------CCccccCCCCCCcHHHHHHHh-CCHHHHHHHHh
Confidence 3679999999999874 678888764 2345555 5899999999977 78888888853
No 44
>PHA02716 CPXV016; CPX019; EVM010; Provisional
Probab=96.35 E-value=0.0089 Score=73.59 Aligned_cols=55 Identities=11% Similarity=0.117 Sum_probs=42.8
Q ss_pred hhchHHHHHHHcCC--hhHHHHHHhhcccCCCCCCCccccCCCCCCCCCCchhhhhcc--cCChhHHHHHh
Q 002028 888 WEIQLLNRAVKMKC--RRMVDLLIHYSLTSSNDTPQKYIFPPNLAGPGGITPLHLAAC--TSDSDDIIDAL 954 (978)
Q Consensus 888 ~e~~LLH~AV~~~s--~~mVelLL~~~~~~~~~~~~~y~F~pd~~GpsGlTPLHIAAs--~~g~~~vldaL 954 (978)
.+.||||+|++.++ .++|++||.+. -+++..+..|+||||.|+. ..+..++++.|
T Consensus 211 ~G~TPLH~Aa~~g~~~~eIVklLLe~G------------ADVN~kD~~G~TPLh~Ai~~a~n~~~EIvkiL 269 (764)
T PHA02716 211 HLITPLHTYLITGNVCASVIKKIIELG------------GDMDMKCVNGMSPIMTYIINIDNINPEITNIY 269 (764)
T ss_pred CCCCHHHHHHHcCCCCHHHHHHHHHcC------------CCCCCCCCCCCCHHHHHHHhhhccCHHHHHHH
Confidence 46899999999995 58999999875 2466778899999998853 33566666666
No 45
>TIGR00870 trp transient-receptor-potential calcium channel protein. after chronic exposure to capsaicin. (McCleskey and Gold, 1999).
Probab=96.31 E-value=0.004 Score=75.37 Aligned_cols=71 Identities=24% Similarity=0.289 Sum_probs=49.8
Q ss_pred hhchHHHHHHHcCChhHHHHHHhhcccCCCCCC-CccccCCC-CCCCCCCchhhhhcccCChhHHHHHhhcCcc
Q 002028 888 WEIQLLNRAVKMKCRRMVDLLIHYSLTSSNDTP-QKYIFPPN-LAGPGGITPLHLAACTSDSDDIIDALTNDPQ 959 (978)
Q Consensus 888 ~e~~LLH~AV~~~s~~mVelLL~~~~~~~~~~~-~~y~F~pd-~~GpsGlTPLHIAAs~~g~~~vldaLt~DP~ 959 (978)
.++||||.|+.+|+.++|++||........... ..|.-... .....|.||||+||+. +..+++.+|.++|.
T Consensus 127 ~G~TpLhlAa~~~~~eiVklLL~~GAdv~~~~~~~~~~~~~~~~~~~~g~tpL~~Aa~~-~~~~iv~lLl~~ga 199 (743)
T TIGR00870 127 PGITALHLAAHRQNYEIVKLLLERGASVPARACGDFFVKSQGVDSFYHGESPLNAAACL-GSPSIVALLSEDPA 199 (743)
T ss_pred CCCcHHHHHHHhCCHHHHHHHHhCCCCCCcCcCCchhhcCCCCCcccccccHHHHHHHh-CCHHHHHHHhcCCc
Confidence 478999999999999999999987641110000 01111111 0123589999999999 88999999988874
No 46
>PHA02884 ankyrin repeat protein; Provisional
Probab=96.26 E-value=0.0089 Score=66.33 Aligned_cols=76 Identities=18% Similarity=0.258 Sum_probs=56.2
Q ss_pred HHHHHHhccchHHHHHHHHHHHHhccccCCCccHHHHHHhhhchHHHHHHHcCChhHHHHHHhhcccCCCCCCCccccCC
Q 002028 848 FLLVFSVDRGCCALVKAILDILVEGNLSMDGLSRESLEMLWEIQLLNRAVKMKCRRMVDLLIHYSLTSSNDTPQKYIFPP 927 (978)
Q Consensus 848 ~LL~FAverdWcAVvkkLLdiL~~g~v~~~~~s~~~~~~l~e~~LLH~AV~~~s~~mVelLL~~~~~~~~~~~~~y~F~p 927 (978)
-.|-+|+..+-..+++.||..-. +..... -..+.||||.|+..++.++|++|+.+.. ++
T Consensus 72 TpLh~Aa~~~~~eivklLL~~GA----DVN~~~-----~~~g~TpLh~Aa~~~~~eivklLL~~GA------------di 130 (300)
T PHA02884 72 NPLIYAIDCDNDDAAKLLIRYGA----DVNRYA-----EEAKITPLYISVLHGCLKCLEILLSYGA------------DI 130 (300)
T ss_pred CHHHHHHHcCCHHHHHHHHHcCC----CcCccc-----CCCCCCHHHHHHHcCCHHHHHHHHHCCC------------CC
Confidence 46677888888888887776432 222110 0136799999999999999999998752 46
Q ss_pred CCCCCCCCchhhhhccc
Q 002028 928 NLAGPGGITPLHLAACT 944 (978)
Q Consensus 928 d~~GpsGlTPLHIAAs~ 944 (978)
+..+..|+||||+|+..
T Consensus 131 n~kd~~G~TpL~~A~~~ 147 (300)
T PHA02884 131 NIQTNDMVTPIELALMI 147 (300)
T ss_pred CCCCCCCCCHHHHHHHh
Confidence 66788899999999864
No 47
>PHA02917 ankyrin-like protein; Provisional
Probab=96.18 E-value=0.011 Score=71.74 Aligned_cols=82 Identities=20% Similarity=0.336 Sum_probs=60.3
Q ss_pred hHHHHHHHHHHHHhccccCCCccHHHHHHhhhchHHHHHHHcCChhHHHHHHhhcccCCCCCCCccccCCCCCCCCCCch
Q 002028 858 CCALVKAILDILVEGNLSMDGLSRESLEMLWEIQLLNRAVKMKCRRMVDLLIHYSLTSSNDTPQKYIFPPNLAGPGGITP 937 (978)
Q Consensus 858 WcAVvkkLLdiL~~g~v~~~~~s~~~~~~l~e~~LLH~AV~~~s~~mVelLL~~~~~~~~~~~~~y~F~pd~~GpsGlTP 937 (978)
||. ...++.+|..-+.+...... .+.||||.|+..++.+++++|+.+. -+++..+..|.||
T Consensus 428 ~~~-~~~~v~~Ll~~GAdIN~kd~------~G~TpLh~Aa~~~~~~~v~~Ll~~G------------Adin~~d~~G~T~ 488 (661)
T PHA02917 428 ACP-ILSTINICLPYLKDINMIDK------RGETLLHKAVRYNKQSLVSLLLESG------------SDVNIRSNNGYTC 488 (661)
T ss_pred hhh-hHHHHHHHHHCCCCCCCCCC------CCcCHHHHHHHcCCHHHHHHHHHCc------------CCCCCCCCCCCCH
Confidence 344 34455777775544443321 4789999999999999999999874 3467778999999
Q ss_pred hhhhcccCChhHHHHHh-hcCc
Q 002028 938 LHLAACTSDSDDIIDAL-TNDP 958 (978)
Q Consensus 938 LHIAAs~~g~~~vldaL-t~DP 958 (978)
||+|+......+++..| .+.|
T Consensus 489 L~~A~~~~~~~~iv~~LL~~ga 510 (661)
T PHA02917 489 IAIAINESRNIELLKMLLCHKP 510 (661)
T ss_pred HHHHHHhCCCHHHHHHHHHcCC
Confidence 99999644677888888 4444
No 48
>PHA02798 ankyrin-like protein; Provisional
Probab=96.13 E-value=0.0094 Score=68.67 Aligned_cols=74 Identities=18% Similarity=0.163 Sum_probs=54.9
Q ss_pred HHHHHHHhccccCCCccHHHHHHhhhchHHHHHHHcC---ChhHHHHHHhhcccCCCCCCCccccCCCCCCCCCCchhhh
Q 002028 864 AILDILVEGNLSMDGLSRESLEMLWEIQLLNRAVKMK---CRRMVDLLIHYSLTSSNDTPQKYIFPPNLAGPGGITPLHL 940 (978)
Q Consensus 864 kLLdiL~~g~v~~~~~s~~~~~~l~e~~LLH~AV~~~---s~~mVelLL~~~~~~~~~~~~~y~F~pd~~GpsGlTPLHI 940 (978)
.++.+|.+.+.+...... .+.||||+|++.+ +.++|++|+... .++++.+..|.||||+
T Consensus 90 ~iv~~Ll~~GadiN~~d~------~G~TpLh~a~~~~~~~~~~iv~~Ll~~G------------advn~~d~~g~tpL~~ 151 (489)
T PHA02798 90 DIVKILIENGADINKKNS------DGETPLYCLLSNGYINNLEILLFMIENG------------ADTTLLDKDGFTMLQV 151 (489)
T ss_pred HHHHHHHHCCCCCCCCCC------CcCcHHHHHHHcCCcChHHHHHHHHHcC------------CCccccCCCCCcHHHH
Confidence 455566665555444332 4789999999874 789999999774 4567778999999999
Q ss_pred hcccCC--hhHHHHHhh
Q 002028 941 AACTSD--SDDIIDALT 955 (978)
Q Consensus 941 AAs~~g--~~~vldaLt 955 (978)
|+.... ..+|++.|.
T Consensus 152 a~~~~~~~~~~vv~~Ll 168 (489)
T PHA02798 152 YLQSNHHIDIEIIKLLL 168 (489)
T ss_pred HHHcCCcchHHHHHHHH
Confidence 988733 378999984
No 49
>PHA02989 ankyrin repeat protein; Provisional
Probab=96.11 E-value=0.011 Score=68.20 Aligned_cols=11 Identities=18% Similarity=0.410 Sum_probs=6.6
Q ss_pred HHHHHHHHHHh
Q 002028 814 EEVLHFLNELG 824 (978)
Q Consensus 814 ~q~l~FL~ELG 824 (978)
.++..||.|-|
T Consensus 50 ~~iv~~Ll~~G 60 (494)
T PHA02989 50 IKIVKLLIDNG 60 (494)
T ss_pred hHHHHHHHHcC
Confidence 35666666655
No 50
>PHA02876 ankyrin repeat protein; Provisional
Probab=96.09 E-value=0.012 Score=70.33 Aligned_cols=55 Identities=18% Similarity=0.256 Sum_probs=48.3
Q ss_pred hchHHHHHHHcCChhHHHHHHhhcccCCCCCCCccccCCCCCCCCCCchhhhhcccCChhHHHHHhhc
Q 002028 889 EIQLLNRAVKMKCRRMVDLLIHYSLTSSNDTPQKYIFPPNLAGPGGITPLHLAACTSDSDDIIDALTN 956 (978)
Q Consensus 889 e~~LLH~AV~~~s~~mVelLL~~~~~~~~~~~~~y~F~pd~~GpsGlTPLHIAAs~~g~~~vldaLt~ 956 (978)
.+++|+.|++.++.++|++|+... .+++..+..|+||||+||.. |..++++.|.+
T Consensus 145 ~~~~l~~~i~~~~~~i~k~Ll~~G------------advn~~d~~G~TpLh~Aa~~-G~~~iv~~LL~ 199 (682)
T PHA02876 145 YMKLIKERIQQDELLIAEMLLEGG------------ADVNAKDIYCITPIHYAAER-GNAKMVNLLLS 199 (682)
T ss_pred hhHHHHHHHHCCcHHHHHHHHhCC------------CCCCCCCCCCCCHHHHHHHC-CCHHHHHHHHH
Confidence 468999999999999999999774 45677788999999999998 89999999943
No 51
>KOG0195 consensus Integrin-linked kinase [Signal transduction mechanisms]
Probab=96.09 E-value=0.0056 Score=67.67 Aligned_cols=23 Identities=22% Similarity=0.242 Sum_probs=15.1
Q ss_pred hchHHHHHHHcCChhHHHHHHhh
Q 002028 889 EIQLLNRAVKMKCRRMVDLLIHY 911 (978)
Q Consensus 889 e~~LLH~AV~~~s~~mVelLL~~ 911 (978)
+..|||||++-++..+||.||.-
T Consensus 34 gfsplhwaakegh~aivemll~r 56 (448)
T KOG0195|consen 34 GFSPLHWAAKEGHVAIVEMLLSR 56 (448)
T ss_pred CcchhhhhhhcccHHHHHHHHhc
Confidence 45667777777777777766643
No 52
>KOG0510 consensus Ankyrin repeat protein [General function prediction only]
Probab=96.00 E-value=0.0087 Score=73.05 Aligned_cols=55 Identities=31% Similarity=0.297 Sum_probs=37.4
Q ss_pred hchHHHHHHHcCChhHHHHHHh-hcccCCCCCCCccccCCCCCCCCCCchhhhhcccCChhHHHHHhh
Q 002028 889 EIQLLNRAVKMKCRRMVDLLIH-YSLTSSNDTPQKYIFPPNLAGPGGITPLHLAACTSDSDDIIDALT 955 (978)
Q Consensus 889 e~~LLH~AV~~~s~~mVelLL~-~~~~~~~~~~~~y~F~pd~~GpsGlTPLHIAAs~~g~~~vldaLt 955 (978)
+-+|||+|++.++..-|+-||+ +. .+..+..+..|-||||+|| -.|..+|+.+|.
T Consensus 306 ~~spLH~AA~yg~~ntv~rLL~~~~-----------~rllne~D~~g~tpLHlaa-~~gH~~v~qlLl 361 (929)
T KOG0510|consen 306 EESPLHFAAIYGRINTVERLLQESD-----------TRLLNESDLHGMTPLHLAA-KSGHDRVVQLLL 361 (929)
T ss_pred CCCchHHHHHcccHHHHHHHHhCcC-----------ccccccccccCCCchhhhh-hcCHHHHHHHHH
Confidence 4577777777777777777776 32 3344455677778888877 347777777773
No 53
>COG0666 Arp FOG: Ankyrin repeat [General function prediction only]
Probab=95.97 E-value=0.017 Score=55.80 Aligned_cols=82 Identities=22% Similarity=0.232 Sum_probs=59.8
Q ss_pred cchHHHHHHHHHHHHhccccCCCccHHHHHHhhhchHHHHHHHcCChhHHHHHHhhcccCCCCCCCccccCCCCCCCCCC
Q 002028 856 RGCCALVKAILDILVEGNLSMDGLSRESLEMLWEIQLLNRAVKMKCRRMVDLLIHYSLTSSNDTPQKYIFPPNLAGPGGI 935 (978)
Q Consensus 856 rdWcAVvkkLLdiL~~g~v~~~~~s~~~~~~l~e~~LLH~AV~~~s~~mVelLL~~~~~~~~~~~~~y~F~pd~~GpsGl 935 (978)
.++..+++.||..-.. .... ......+.||||||+..++..||++||.+.+ .++.....|.
T Consensus 121 ~~~~~~~~~ll~~g~~--~~~~-----~~~~~~g~tpl~~A~~~~~~~~~~~ll~~~~------------~~~~~~~~g~ 181 (235)
T COG0666 121 EGNIEVAKLLLEAGAD--LDVN-----NLRDEDGNTPLHWAALNGDADIVELLLEAGA------------DPNSRNSYGV 181 (235)
T ss_pred cchHHHHHHHHHcCCC--CCCc-----cccCCCCCchhHHHHHcCchHHHHHHHhcCC------------CCcccccCCC
Confidence 3448888888876541 0001 0122357899999999999999999998853 1334478999
Q ss_pred chhhhhcccCChhHHHHHhhcC
Q 002028 936 TPLHLAACTSDSDDIIDALTND 957 (978)
Q Consensus 936 TPLHIAAs~~g~~~vldaLt~D 957 (978)
||||+|+.. +..+++..|.++
T Consensus 182 t~l~~a~~~-~~~~~~~~l~~~ 202 (235)
T COG0666 182 TALDPAAKN-GRIELVKLLLDK 202 (235)
T ss_pred cchhhhccc-chHHHHHHHHhc
Confidence 999999998 777888888653
No 54
>KOG4177 consensus Ankyrin [Cell wall/membrane/envelope biogenesis]
Probab=95.78 E-value=0.0096 Score=75.54 Aligned_cols=94 Identities=26% Similarity=0.288 Sum_probs=74.8
Q ss_pred cHHHHHHHHHHHhccchHHHHHHHHHHHHhccccCCCccHHHHHHhhhchHHHHHHHcCChhHHHHHHhhcccCCCCCCC
Q 002028 842 SLSRFKFLLVFSVDRGCCALVKAILDILVEGNLSMDGLSRESLEMLWEIQLLNRAVKMKCRRMVDLLIHYSLTSSNDTPQ 921 (978)
Q Consensus 842 s~~RFk~LL~FAverdWcAVvkkLLdiL~~g~v~~~~~s~~~~~~l~e~~LLH~AV~~~s~~mVelLL~~~~~~~~~~~~ 921 (978)
...|.+-.|-|||+.+=-.+|++||.-=.+-+ .. . -.++||||-|+..++.+++++|+.+.
T Consensus 536 ~~~r~~TpLh~A~~~g~v~~VkfLLe~gAdv~------ak---~-~~G~TPLH~Aa~~G~~~i~~LLlk~G--------- 596 (1143)
T KOG4177|consen 536 RTGRGYTPLHVAVHYGNVDLVKFLLEHGADVN------AK---D-KLGYTPLHQAAQQGHNDIAELLLKHG--------- 596 (1143)
T ss_pred hcccccchHHHHHhcCCchHHHHhhhCCcccc------cc---C-CCCCChhhHHHHcChHHHHHHHHHcC---------
Confidence 33456678999999999999999987433311 11 1 24799999999999999999999885
Q ss_pred ccccCCCCCCCCCCchhhhhcccCChhHHHHHh---hcCc
Q 002028 922 KYIFPPNLAGPGGITPLHLAACTSDSDDIIDAL---TNDP 958 (978)
Q Consensus 922 ~y~F~pd~~GpsGlTPLHIAAs~~g~~~vldaL---t~DP 958 (978)
=.||+.+.-|-||||||+.+ +--++++.| +.+|
T Consensus 597 ---A~vna~d~~g~TpL~iA~~l-g~~~~~k~l~~~~~~~ 632 (1143)
T KOG4177|consen 597 ---ASVNAADLDGFTPLHIAVRL-GYLSVVKLLKVVTATP 632 (1143)
T ss_pred ---CCCCcccccCcchhHHHHHh-cccchhhHHHhccCcc
Confidence 24889999999999999999 777788877 5654
No 55
>PF13606 Ank_3: Ankyrin repeat
Probab=95.69 E-value=0.0086 Score=45.00 Aligned_cols=24 Identities=17% Similarity=0.063 Sum_probs=22.2
Q ss_pred hchHHHHHHHcCChhHHHHHHhhc
Q 002028 889 EIQLLNRAVKMKCRRMVDLLIHYS 912 (978)
Q Consensus 889 e~~LLH~AV~~~s~~mVelLL~~~ 912 (978)
+.||||+|++.++.+||++||.+.
T Consensus 2 G~T~Lh~A~~~g~~e~v~~Ll~~g 25 (30)
T PF13606_consen 2 GNTPLHLAASNGNIEIVKYLLEHG 25 (30)
T ss_pred CCCHHHHHHHhCCHHHHHHHHHcC
Confidence 579999999999999999999875
No 56
>KOG0510 consensus Ankyrin repeat protein [General function prediction only]
Probab=95.67 E-value=0.013 Score=71.63 Aligned_cols=88 Identities=26% Similarity=0.277 Sum_probs=61.5
Q ss_pred HHHHHHhccchHHHHHHHHHHHHhccccCCCccHHHHHHhhhchHHHHHHHcCChhHHHHHHhhcccCCCCCCCccccCC
Q 002028 848 FLLVFSVDRGCCALVKAILDILVEGNLSMDGLSRESLEMLWEIQLLNRAVKMKCRRMVDLLIHYSLTSSNDTPQKYIFPP 927 (978)
Q Consensus 848 ~LL~FAverdWcAVvkkLLdiL~~g~v~~~~~s~~~~~~l~e~~LLH~AV~~~s~~mVelLL~~~~~~~~~~~~~y~F~p 927 (978)
..|-||..-+---.++.||. -.|+..+.+- + +.+|||||.|++.|+-..|++||.+.. .|--
T Consensus 308 spLH~AA~yg~~ntv~rLL~--~~~~rllne~-----D-~~g~tpLHlaa~~gH~~v~qlLl~~GA----------~~~~ 369 (929)
T KOG0510|consen 308 SPLHFAAIYGRINTVERLLQ--ESDTRLLNES-----D-LHGMTPLHLAAKSGHDRVVQLLLNKGA----------LFLN 369 (929)
T ss_pred CchHHHHHcccHHHHHHHHh--CcCccccccc-----c-ccCCCchhhhhhcCHHHHHHHHHhcCh----------hhhc
Confidence 45667666666666777777 2233222211 2 348999999999999999999998863 1110
Q ss_pred C-CCCCCCCchhhhhcccCChhHHHHHh
Q 002028 928 N-LAGPGGITPLHLAACTSDSDDIIDAL 954 (978)
Q Consensus 928 d-~~GpsGlTPLHIAAs~~g~~~vldaL 954 (978)
+ -++-.|.||||+||-- |..-.+..|
T Consensus 370 ~~e~D~dg~TaLH~Aa~~-g~~~av~~L 396 (929)
T KOG0510|consen 370 MSEADSDGNTALHLAAKY-GNTSAVQKL 396 (929)
T ss_pred ccccccCCchhhhHHHHh-ccHHHHHHH
Confidence 0 1278899999999987 777777777
No 57
>PHA02716 CPXV016; CPX019; EVM010; Provisional
Probab=95.65 E-value=0.011 Score=72.97 Aligned_cols=56 Identities=16% Similarity=0.224 Sum_probs=45.4
Q ss_pred hhchHHHHHHHcCChhHH-----HHHHhhcccCCCCCCCccccCCCCCCCCCCchhhhhcccCC----hhHHHHHhh
Q 002028 888 WEIQLLNRAVKMKCRRMV-----DLLIHYSLTSSNDTPQKYIFPPNLAGPGGITPLHLAACTSD----SDDIIDALT 955 (978)
Q Consensus 888 ~e~~LLH~AV~~~s~~mV-----elLL~~~~~~~~~~~~~y~F~pd~~GpsGlTPLHIAAs~~g----~~~vldaLt 955 (978)
.|.||||+||..++..+| ++||... .++++.+..|+||||+|+.-.. ..+|+.+|.
T Consensus 496 ~G~TPLh~Aa~~g~~~~v~~e~~k~LL~~G------------ADIN~~d~~G~TPLh~A~~~g~~~~~~~eIvk~LL 560 (764)
T PHA02716 496 SGMTPLHVSIISHTNANIVMDSFVYLLSIQ------------YNINIPTKNGVTPLMLTMRNNRLSGHQWYIVKNIL 560 (764)
T ss_pred CCCCHHHHHHHcCCccchhHHHHHHHHhCC------------CCCcccCCCCCCHHHHHHHcCCccccHHHHHHHHH
Confidence 478999999999988655 9999763 5577889999999999998631 348898883
No 58
>KOG1710 consensus MYND Zn-finger and ankyrin repeat protein [General function prediction only]
Probab=95.61 E-value=0.021 Score=63.33 Aligned_cols=57 Identities=23% Similarity=0.239 Sum_probs=46.2
Q ss_pred hhchHHHHHHHcCChhHHHHHHhhcccCCCCCCCccccCCCCCCCCCCchhhhhcccCChhHHHHHhhc
Q 002028 888 WEIQLLNRAVKMKCRRMVDLLIHYSLTSSNDTPQKYIFPPNLAGPGGITPLHLAACTSDSDDIIDALTN 956 (978)
Q Consensus 888 ~e~~LLH~AV~~~s~~mVelLL~~~~~~~~~~~~~y~F~pd~~GpsGlTPLHIAAs~~g~~~vldaLt~ 956 (978)
.+|++|--|..+|.+.||++||+...... +-....+.||||.||- +|+-||-.+|.+
T Consensus 44 sGMs~LahAaykGnl~~v~lll~~gaDvN-----------~~qhg~~YTpLmFAAL-SGn~dvcrllld 100 (396)
T KOG1710|consen 44 SGMSVLAHAAYKGNLTLVELLLELGADVN-----------DKQHGTLYTPLMFAAL-SGNQDVCRLLLD 100 (396)
T ss_pred CcccHHHHHHhcCcHHHHHHHHHhCCCcC-----------cccccccccHHHHHHH-cCCchHHHHHHh
Confidence 58999999999999999999999862100 1226789999999985 499999999855
No 59
>cd00204 ANK ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins. The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other types of domains. The structural repeat unit contains two antiparallel helices and a beta-hairpin, repeats are stacked in a superhelical arrangement; this alignment contains 4 consecutive repeats.
Probab=95.58 E-value=0.023 Score=50.21 Aligned_cols=24 Identities=21% Similarity=0.133 Sum_probs=16.8
Q ss_pred hchHHHHHHHcCChhHHHHHHhhc
Q 002028 889 EIQLLNRAVKMKCRRMVDLLIHYS 912 (978)
Q Consensus 889 e~~LLH~AV~~~s~~mVelLL~~~ 912 (978)
+.++||.|++.++.++|+.|+...
T Consensus 7 g~t~l~~a~~~~~~~~i~~li~~~ 30 (126)
T cd00204 7 GRTPLHLAASNGHLEVVKLLLENG 30 (126)
T ss_pred CCCHHHHHHHcCcHHHHHHHHHcC
Confidence 457777777777777777777654
No 60
>KOG0195 consensus Integrin-linked kinase [Signal transduction mechanisms]
Probab=95.54 E-value=0.019 Score=63.73 Aligned_cols=92 Identities=23% Similarity=0.250 Sum_probs=66.5
Q ss_pred HHHHHHhccchHHHHHHHHHHHHhccccCCCccHHHHHHhhhchHHHHHHHcCChhHHHHHHhhcccCCCCCCCccccCC
Q 002028 848 FLLVFSVDRGCCALVKAILDILVEGNLSMDGLSRESLEMLWEIQLLNRAVKMKCRRMVDLLIHYSLTSSNDTPQKYIFPP 927 (978)
Q Consensus 848 ~LL~FAverdWcAVvkkLLdiL~~g~v~~~~~s~~~~~~l~e~~LLH~AV~~~s~~mVelLL~~~~~~~~~~~~~y~F~p 927 (978)
.+|-+++.-|=.+|+.+||-- +...... - .+.-++||+|+.-+++++|..||.+.. +.
T Consensus 36 splhwaakegh~aivemll~r----garvn~t-----n-mgddtplhlaaahghrdivqkll~~ka------------dv 93 (448)
T KOG0195|consen 36 SPLHWAAKEGHVAIVEMLLSR----GARVNST-----N-MGDDTPLHLAAAHGHRDIVQKLLSRKA------------DV 93 (448)
T ss_pred chhhhhhhcccHHHHHHHHhc----ccccccc-----c-CCCCcchhhhhhcccHHHHHHHHHHhc------------cc
Confidence 467788888888888877642 2111111 1 256699999999999999999998862 35
Q ss_pred CCCCCCCCchhhhhcccCChhHHHHHhhcCcchhh
Q 002028 928 NLAGPGGITPLHLAACTSDSDDIIDALTNDPQEVS 962 (978)
Q Consensus 928 d~~GpsGlTPLHIAAs~~g~~~vldaLt~DP~~vG 962 (978)
+++...|-||||.|+-- |-+-|.+-|-.--.+|+
T Consensus 94 navnehgntplhyacfw-gydqiaedli~~ga~v~ 127 (448)
T KOG0195|consen 94 NAVNEHGNTPLHYACFW-GYDQIAEDLISCGAAVN 127 (448)
T ss_pred chhhccCCCchhhhhhh-cHHHHHHHHHhccceee
Confidence 56789999999999887 77777766644333443
No 61
>KOG0520 consensus Uncharacterized conserved protein, contains IPT/TIG domain [Function unknown]
Probab=95.41 E-value=0.22 Score=62.70 Aligned_cols=255 Identities=16% Similarity=0.143 Sum_probs=138.5
Q ss_pred eeeEecceEEecCCeeEEEEEeecCCCCCceEEEeecCcccceeecccc-----CCCCcccceeEEeeeecCCCCCCccc
Q 002028 681 ELISVSPLAVVGGQELSFKLRGRNLTNLGTKIHCTFMGGYASQEVTSST-----CQGSIYDEIILAGLKIQDTSPSVLGR 755 (978)
Q Consensus 681 ~I~~V~PiAv~ag~~~~f~v~G~NL~~p~tRLLcs~~GkYL~~E~~~~~-----~~g~~~de~~~~~f~v~~s~P~~~Gr 755 (978)
-|.-++|=+......+.+.|.|+-=....--.-|.|++.-.-.|.+... +|. .+-.+..|+|.|. ..|.
T Consensus 406 ~I~DfSP~Wsy~~ggvKVlV~G~~~~~~~~~ysc~Fg~~~VPAeliq~GVLrC~~P~---h~~G~V~l~V~c~---~~~~ 479 (975)
T KOG0520|consen 406 TITDFSPEWSYLDGGVKVLVTGFPQDETRSNYSCMFGEQRVPAELIQEGVLRCYAPP---HEPGVVNLQVTCR---ISGL 479 (975)
T ss_pred eeeccCcccccCCCCcEEEEecCccccCCCceEEEeCCccccHHHhhcceeeeecCc---cCCCeEEEEEEec---ccce
Confidence 4888999999999999999999833334555677787766655543311 111 1223455555554 4444
Q ss_pred eEEEEe-cCCCCCCccEEecch--h---HHHHHHhhhhhhc-cccccccccccccccccCCCC---cHHHHHHHHHHHhH
Q 002028 756 FFIEVE-NGFKGNSFPVIIADA--T---ICKELSLLESEFG-AEAKVCDVISEHQAHEYGRPR---SREEVLHFLNELGW 825 (978)
Q Consensus 756 ~FIEVE-nG~~SnffPvIVad~--~---ICsEir~LE~~~e-~s~~~~d~~Se~~~~~~~~~~---sr~q~l~FL~ELGW 825 (978)
+.-|+- -.|..-.-+.+=... + ..++...||.-.. ...+. .++......+..+ --+-+..+++++..
T Consensus 480 ~~se~ref~~~~~~~~~~d~~s~~d~~~~~sl~~rl~~~~~r~~~~~---~s~~~~~n~~~~~~~~l~skv~~l~~~~~~ 556 (975)
T KOG0520|consen 480 ACSEVREFAYLVQPSQQIDKLSWEDFLFQMSLLHRLETMLNRKQSIL---SSKPSTENTSDAESGNLASKVVHLLNEWAY 556 (975)
T ss_pred eeeeehheeecccCcccccccccccchhhhHHHHHHHHHHHHhHhHh---hccCCccccccccchhHHHHHHHHHHHHHH
Confidence 444443 233322222222211 1 1222333333322 11100 1111111111111 23566778888877
Q ss_pred -HhhhccccccccCCCCcHHHHHHHHHHHhccchHHHHHHHHHH-------H-----------HhccccCCC-------c
Q 002028 826 -LFQRKRASSIVKGSDYSLSRFKFLLVFSVDRGCCALVKAILDI-------L-----------VEGNLSMDG-------L 879 (978)
Q Consensus 826 -LLqr~~~~~~~~~~dfs~~RFk~LL~FAverdWcAVvkkLLdi-------L-----------~~g~v~~~~-------~ 879 (978)
++............ | |=.-|+.++-+++..-++.+|++- | ..+++.+.. .
T Consensus 557 r~~~~~~~~~~~~~~-~---r~~lllhL~a~~lyawLie~~~e~~~~~~~eld~d~qgV~hfca~lg~ewA~ll~~~~~~ 632 (975)
T KOG0520|consen 557 RLLKSISENLSSSVN-F---RDMLLLHLLAELLYAWLIEKVIEWAGSGDLELDRDGQGVIHFCAALGYEWAFLPISADGV 632 (975)
T ss_pred HHHhhHhhhccccCC-C---cchHHHHHHHHHhHHHHHHHHhcccccCchhhcccCCChhhHhhhcCCceeEEEEeeccc
Confidence 66554222211110 1 223455555666666666666662 1 112211111 1
Q ss_pred cHHHHHHhhhchHHHHHHHcCChhHHHHHHhhcccCCCCCCCccccCCCCCCCCCCchhhhhcccCChhHHHHHhhc
Q 002028 880 SRESLEMLWEIQLLNRAVKMKCRRMVDLLIHYSLTSSNDTPQKYIFPPNLAGPGGITPLHLAACTSDSDDIIDALTN 956 (978)
Q Consensus 880 s~~~~~~l~e~~LLH~AV~~~s~~mVelLL~~~~~~~~~~~~~y~F~pd~~GpsGlTPLHIAAs~~g~~~vldaLt~ 956 (978)
+-...+- .+.++||||..+++..||..|++.. ...++.-+|...-|.|.|+--||.+- |-.+|.+.|..
T Consensus 633 ai~i~D~-~G~tpL~wAa~~G~e~l~a~l~~lg------a~~~~~tdps~~~p~g~ta~~la~s~-g~~gia~~lse 701 (975)
T KOG0520|consen 633 AIDIRDR-NGWTPLHWAAFRGREKLVASLIELG------ADPGAVTDPSPETPGGKTAADLARAN-GHKGIAGYLSE 701 (975)
T ss_pred ccccccC-CCCcccchHhhcCHHHHHHHHHHhc------cccccccCCCCCCCCCCchhhhhhcc-cccchHHHHhh
Confidence 1111111 3679999999999999999999874 34557778877789999999999965 77778888865
No 62
>PHA02795 ankyrin-like protein; Provisional
Probab=95.39 E-value=0.036 Score=64.61 Aligned_cols=88 Identities=16% Similarity=0.067 Sum_probs=62.0
Q ss_pred HHHHHhccchHHHHHHHHHHHHhccccCCCcc-HHHHHHhhhchHHHHHHHcCChhHHHHHHhhcccCCCCCCCccccCC
Q 002028 849 LLVFSVDRGCCALVKAILDILVEGNLSMDGLS-RESLEMLWEIQLLNRAVKMKCRRMVDLLIHYSLTSSNDTPQKYIFPP 927 (978)
Q Consensus 849 LL~FAverdWcAVvkkLLdiL~~g~v~~~~~s-~~~~~~l~e~~LLH~AV~~~s~~mVelLL~~~~~~~~~~~~~y~F~p 927 (978)
.|-.|...++..|++.||..-. ...+.. ....... +.+++|.|...++.++|++|+.+. -+.
T Consensus 152 ~lh~A~~~~~~eIVk~Lls~Ga----~~~n~~~~~l~~~~-~~t~l~~a~~~~~~eIve~LIs~G------------ADI 214 (437)
T PHA02795 152 AYFRGICKKESSVVEFILNCGI----PDENDVKLDLYKII-QYTRGFLVDEPTVLEIYKLCIPYI------------EDI 214 (437)
T ss_pred HHHHHHHcCcHHHHHHHHhcCC----cccccccchhhhhh-ccchhHHHHhcCHHHHHHHHHhCc------------CCc
Confidence 4557888888888888866522 111110 0001122 558899999999999999999775 235
Q ss_pred CCCCCCCCchhhhhcccCChhHHHHHh
Q 002028 928 NLAGPGGITPLHLAACTSDSDDIIDAL 954 (978)
Q Consensus 928 d~~GpsGlTPLHIAAs~~g~~~vldaL 954 (978)
+..+..|.||||+||.. +..+++..|
T Consensus 215 N~kD~~G~TpLh~Aa~~-g~~eiVelL 240 (437)
T PHA02795 215 NQLDAGGRTLLYRAIYA-GYIDLVSWL 240 (437)
T ss_pred CcCCCCCCCHHHHHHHc-CCHHHHHHH
Confidence 56688999999999987 888999999
No 63
>PF00023 Ank: Ankyrin repeat Hereditary spherocytosis; InterPro: IPR002110 The ankyrin repeat is one of the most common protein-protein interaction motifs in nature. Ankyrin repeats are tandemly repeated modules of about 33 amino acids. They occur in a large number of functionally diverse proteins mainly from eukaryotes. The few known examples from prokaryotes and viruses may be the result of horizontal gene transfers []. The repeat has been found in proteins of diverse function such as transcriptional initiators, cell-cycle regulators, cytoskeletal, ion transporters and signal transducers. The ankyrin fold appears to be defined by its structure rather than its function since there is no specific sequence or structure which is universally recognised by it. The conserved fold of the ankyrin repeat unit is known from several crystal and solution structures [, , , ]. Each repeat folds into a helix-loop-helix structure with a beta-hairpin/loop region projecting out from the helices at a 90o angle. The repeats stack together to form an L-shaped structure [, ].; GO: 0005515 protein binding; PDB: 1D9S_A 1NFI_F 1IKN_D 1WDY_A 1OT8_C 1QYM_A 1TR4_A 1UOH_A 1N11_A 1K1A_A ....
Probab=95.32 E-value=0.015 Score=43.65 Aligned_cols=24 Identities=21% Similarity=0.171 Sum_probs=22.3
Q ss_pred hchHHHHHHHcCChhHHHHHHhhc
Q 002028 889 EIQLLNRAVKMKCRRMVDLLIHYS 912 (978)
Q Consensus 889 e~~LLH~AV~~~s~~mVelLL~~~ 912 (978)
+.||||+||.+++.++|++||...
T Consensus 2 G~TpLh~A~~~~~~~~v~~Ll~~g 25 (33)
T PF00023_consen 2 GNTPLHYAAQRGHPDIVKLLLKHG 25 (33)
T ss_dssp SBBHHHHHHHTTCHHHHHHHHHTT
T ss_pred cccHHHHHHHHHHHHHHHHHHHCc
Confidence 679999999999999999999865
No 64
>cd00204 ANK ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins. The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other types of domains. The structural repeat unit contains two antiparallel helices and a beta-hairpin, repeats are stacked in a superhelical arrangement; this alignment contains 4 consecutive repeats.
Probab=95.29 E-value=0.061 Score=47.48 Aligned_cols=86 Identities=26% Similarity=0.263 Sum_probs=52.9
Q ss_pred HHHHHHhccchHHHHHHHHHHHHhccccCCCccHHHHHHhhhchHHHHHHHcCChhHHHHHHhhcccCCCCCCCccccCC
Q 002028 848 FLLVFSVDRGCCALVKAILDILVEGNLSMDGLSRESLEMLWEIQLLNRAVKMKCRRMVDLLIHYSLTSSNDTPQKYIFPP 927 (978)
Q Consensus 848 ~LL~FAverdWcAVvkkLLdiL~~g~v~~~~~s~~~~~~l~e~~LLH~AV~~~s~~mVelLL~~~~~~~~~~~~~y~F~p 927 (978)
..|-+|+..+..-+++.|+..... .... .. .+.++||.|+..+..+++++|+.+.+ .+
T Consensus 9 t~l~~a~~~~~~~~i~~li~~~~~----~~~~-----~~-~g~~~l~~a~~~~~~~~~~~ll~~~~------------~~ 66 (126)
T cd00204 9 TPLHLAASNGHLEVVKLLLENGAD----VNAK-----DN-DGRTPLHLAAKNGHLEIVKLLLEKGA------------DV 66 (126)
T ss_pred CHHHHHHHcCcHHHHHHHHHcCCC----CCcc-----CC-CCCcHHHHHHHcCCHHHHHHHHHcCC------------Cc
Confidence 456667777776555555433221 1111 11 35588888888888888888887642 23
Q ss_pred CCCCCCCCchhhhhcccCChhHHHHHhhc
Q 002028 928 NLAGPGGITPLHLAACTSDSDDIIDALTN 956 (978)
Q Consensus 928 d~~GpsGlTPLHIAAs~~g~~~vldaLt~ 956 (978)
+.....|.||+|+|+.. +..+++..|.+
T Consensus 67 ~~~~~~~~~~l~~a~~~-~~~~~~~~L~~ 94 (126)
T cd00204 67 NARDKDGNTPLHLAARN-GNLDVVKLLLK 94 (126)
T ss_pred cccCCCCCCHHHHHHHc-CcHHHHHHHHH
Confidence 33456777888888777 45677777733
No 65
>PHA02917 ankyrin-like protein; Provisional
Probab=95.23 E-value=0.053 Score=65.99 Aligned_cols=84 Identities=14% Similarity=0.101 Sum_probs=60.8
Q ss_pred HHHHHhccchHHHHHHHHHHHHh--ccccCCCccHHHHHHhhhchHHHHHHHcCChhHHHHHHhhcccCCCCCCCccccC
Q 002028 849 LLVFSVDRGCCALVKAILDILVE--GNLSMDGLSRESLEMLWEIQLLNRAVKMKCRRMVDLLIHYSLTSSNDTPQKYIFP 926 (978)
Q Consensus 849 LL~FAverdWcAVvkkLLdiL~~--g~v~~~~~s~~~~~~l~e~~LLH~AV~~~s~~mVelLL~~~~~~~~~~~~~y~F~ 926 (978)
-|-+|...+.--|++.+...|.+ |.+..... -.++|+|+..++.+||++||... .+
T Consensus 71 pL~~Aa~~g~~~v~~~~~~~Ll~~~~~~n~~~~----------~~~~~~a~~~~~~e~vk~Ll~~G------------ad 128 (661)
T PHA02917 71 PLEEYTNSRHVKVNKDIAMALLEATGYSNINDF----------NIFSYMKSKNVDVDLIKVLVEHG------------FD 128 (661)
T ss_pred HHHHHHHcCChhHHHHHHHHHHhccCCCCCCCc----------chHHHHHhhcCCHHHHHHHHHcC------------CC
Confidence 34555666666666666666654 22232211 25679999999999999999763 56
Q ss_pred CCCCCCCCCchhhhhcc-cCChhHHHHHh
Q 002028 927 PNLAGPGGITPLHLAAC-TSDSDDIIDAL 954 (978)
Q Consensus 927 pd~~GpsGlTPLHIAAs-~~g~~~vldaL 954 (978)
++..+-.|.||||+|+. -.+..+|+++|
T Consensus 129 in~~d~~g~T~L~~~~a~~~~~~eivklL 157 (661)
T PHA02917 129 LSVKCENHRSVIENYVMTDDPVPEIIDLF 157 (661)
T ss_pred CCccCCCCccHHHHHHHccCCCHHHHHHH
Confidence 77888899999998764 45899999999
No 66
>PF13637 Ank_4: Ankyrin repeats (many copies); PDB: 3B95_A 3B7B_A 3F6Q_A 2KBX_A 3IXE_A 2DWZ_C 2DVW_A 3AJI_A 1S70_B 2HE0_A ....
Probab=95.22 E-value=0.039 Score=45.28 Aligned_cols=52 Identities=19% Similarity=0.178 Sum_probs=36.1
Q ss_pred HHHHHHhccchHHHHHHHHHHHHhccccCCCccHHHHHHhhhchHHHHHHHcCChhHHHHHH
Q 002028 848 FLLVFSVDRGCCALVKAILDILVEGNLSMDGLSRESLEMLWEIQLLNRAVKMKCRRMVDLLI 909 (978)
Q Consensus 848 ~LL~FAverdWcAVvkkLLdiL~~g~v~~~~~s~~~~~~l~e~~LLH~AV~~~s~~mVelLL 909 (978)
.+|-+|+..+-..+++.|+.- +.+..... -.+.||||.||+.++.++|++||
T Consensus 3 t~lh~A~~~g~~~~~~~Ll~~----~~din~~d------~~g~t~lh~A~~~g~~~~~~~Ll 54 (54)
T PF13637_consen 3 TPLHWAARSGNLEIVKLLLEH----GADINAQD------EDGRTPLHYAAKNGNIDIVKFLL 54 (54)
T ss_dssp BHHHHHHHTT-HHHHHHHHHT----TSGTT-B-------TTS--HHHHHHHTT-HHHHHHHH
T ss_pred hHHHHHHHhCCHHHHHHHHHC----CCCCCCCC------CCCCCHHHHHHHccCHHHHHHHC
Confidence 367788999999998888853 34434332 14789999999999999999997
No 67
>KOG0502 consensus Integral membrane ankyrin-repeat protein Kidins220 (protein kinase D substrate) [General function prediction only]
Probab=94.97 E-value=0.021 Score=61.46 Aligned_cols=64 Identities=22% Similarity=0.211 Sum_probs=49.4
Q ss_pred hchHHHHHHHcCChhHHHHHHhhcccCCCCCCCccccCCCCCCCCCCchhhhhcccCChhHHHHHh-hcCcchhhHHHH
Q 002028 889 EIQLLNRAVKMKCRRMVDLLIHYSLTSSNDTPQKYIFPPNLAGPGGITPLHLAACTSDSDDIIDAL-TNDPQEVSYSIF 966 (978)
Q Consensus 889 e~~LLH~AV~~~s~~mVelLL~~~~~~~~~~~~~y~F~pd~~GpsGlTPLHIAAs~~g~~~vldaL-t~DP~~vGl~aW 966 (978)
+.|||-||.++|+.+.|+|||.+. =+|++.|..--|.|.+|..- |-.||+++| +.+|- |-+--|
T Consensus 160 GfTpLiWAaa~G~i~vV~fLL~~G------------Adp~~lgk~resALsLAt~g-gytdiV~lLL~r~vd-VNvyDw 224 (296)
T KOG0502|consen 160 GFTPLIWAAAKGHIPVVQFLLNSG------------ADPDALGKYRESALSLATRG-GYTDIVELLLTREVD-VNVYDW 224 (296)
T ss_pred CchHhHHHHhcCchHHHHHHHHcC------------CChhhhhhhhhhhHhHHhcC-ChHHHHHHHHhcCCC-cceecc
Confidence 679999999999999999999885 35777787778888887665 777888877 66543 333334
No 68
>KOG0509 consensus Ankyrin repeat and DHHC-type Zn-finger domain containing proteins [General function prediction only]
Probab=94.47 E-value=0.051 Score=65.03 Aligned_cols=53 Identities=23% Similarity=0.172 Sum_probs=33.1
Q ss_pred hchHHHHHHHcCChhHHHHHHhhcccCCCCCCCccccCCCC-CCCCCCchhhhhcccCChhHHHHHh
Q 002028 889 EIQLLNRAVKMKCRRMVDLLIHYSLTSSNDTPQKYIFPPNL-AGPGGITPLHLAACTSDSDDIIDAL 954 (978)
Q Consensus 889 e~~LLH~AV~~~s~~mVelLL~~~~~~~~~~~~~y~F~pd~-~GpsGlTPLHIAAs~~g~~~vldaL 954 (978)
++||||||..++....|++||.|.. ..+. ++-.|-||||+|+.- |+-.++.+|
T Consensus 178 grTpLmwAaykg~~~~v~~LL~f~a------------~~~~~d~~~g~TpLHwa~~~-gN~~~v~Ll 231 (600)
T KOG0509|consen 178 GRTPLMWAAYKGFALFVRRLLKFGA------------SLLLTDDNHGNTPLHWAVVG-GNLTAVKLL 231 (600)
T ss_pred CCCHHHHHHHhcccHHHHHHHHhcc------------cccccccccCCchHHHHHhc-CCcceEehh
Confidence 3455555555555555555554431 1222 358999999999987 777777755
No 69
>PF13606 Ank_3: Ankyrin repeat
Probab=94.43 E-value=0.022 Score=42.82 Aligned_cols=22 Identities=45% Similarity=0.640 Sum_probs=19.9
Q ss_pred CCchhhhhcccCChhHHHHHhhc
Q 002028 934 GITPLHLAACTSDSDDIIDALTN 956 (978)
Q Consensus 934 GlTPLHIAAs~~g~~~vldaLt~ 956 (978)
|+||||+||.. +.-+|++.|-+
T Consensus 2 G~T~Lh~A~~~-g~~e~v~~Ll~ 23 (30)
T PF13606_consen 2 GNTPLHLAASN-GNIEIVKYLLE 23 (30)
T ss_pred CCCHHHHHHHh-CCHHHHHHHHH
Confidence 89999999998 89999999944
No 70
>PHA02730 ankyrin-like protein; Provisional
Probab=94.10 E-value=0.1 Score=63.70 Aligned_cols=68 Identities=16% Similarity=0.206 Sum_probs=51.9
Q ss_pred hhchHHHHHHHcCChhHHHHHHhhcccCCCCCCCccccCCCCCCC-CCCchhhhhcccC-ChhHHHHHh-hcCcchhhHH
Q 002028 888 WEIQLLNRAVKMKCRRMVDLLIHYSLTSSNDTPQKYIFPPNLAGP-GGITPLHLAACTS-DSDDIIDAL-TNDPQEVSYS 964 (978)
Q Consensus 888 ~e~~LLH~AV~~~s~~mVelLL~~~~~~~~~~~~~y~F~pd~~Gp-sGlTPLHIAAs~~-g~~~vldaL-t~DP~~vGl~ 964 (978)
.+.||||+|+..++.++|++|+.+.. ++++.+. .|.||||.||... +..+|+++| .+.| .++
T Consensus 461 ~G~TPLh~Aa~~~~~eive~LI~~GA------------dIN~~d~~~g~TaL~~Aa~~~~~~~eIv~~LLs~ga---~i~ 525 (672)
T PHA02730 461 ENKTLLYYAVDVNNIQFARRLLEYGA------------SVNTTSRSIINTAIQKSSYRRENKTKLVDLLLSYHP---TLE 525 (672)
T ss_pred CCCCHHHHHHHhCCHHHHHHHHHCCC------------CCCCCCCcCCcCHHHHHHHhhcCcHHHHHHHHHcCC---CHH
Confidence 37799999999999999999998852 2445554 6899999999763 678899999 4443 356
Q ss_pred HHHHhh
Q 002028 965 IFLLQL 970 (978)
Q Consensus 965 aW~~A~ 970 (978)
+=+..+
T Consensus 526 ~I~~Tf 531 (672)
T PHA02730 526 TMIDAF 531 (672)
T ss_pred HHHHHH
Confidence 655554
No 71
>PF00023 Ank: Ankyrin repeat Hereditary spherocytosis; InterPro: IPR002110 The ankyrin repeat is one of the most common protein-protein interaction motifs in nature. Ankyrin repeats are tandemly repeated modules of about 33 amino acids. They occur in a large number of functionally diverse proteins mainly from eukaryotes. The few known examples from prokaryotes and viruses may be the result of horizontal gene transfers []. The repeat has been found in proteins of diverse function such as transcriptional initiators, cell-cycle regulators, cytoskeletal, ion transporters and signal transducers. The ankyrin fold appears to be defined by its structure rather than its function since there is no specific sequence or structure which is universally recognised by it. The conserved fold of the ankyrin repeat unit is known from several crystal and solution structures [, , , ]. Each repeat folds into a helix-loop-helix structure with a beta-hairpin/loop region projecting out from the helices at a 90o angle. The repeats stack together to form an L-shaped structure [, ].; GO: 0005515 protein binding; PDB: 1D9S_A 1NFI_F 1IKN_D 1WDY_A 1OT8_C 1QYM_A 1TR4_A 1UOH_A 1N11_A 1K1A_A ....
Probab=93.58 E-value=0.039 Score=41.41 Aligned_cols=22 Identities=45% Similarity=0.605 Sum_probs=19.6
Q ss_pred CCchhhhhcccCChhHHHHHhhc
Q 002028 934 GITPLHLAACTSDSDDIIDALTN 956 (978)
Q Consensus 934 GlTPLHIAAs~~g~~~vldaLt~ 956 (978)
|.||||+||.. +..+++..|-.
T Consensus 2 G~TpLh~A~~~-~~~~~v~~Ll~ 23 (33)
T PF00023_consen 2 GNTPLHYAAQR-GHPDIVKLLLK 23 (33)
T ss_dssp SBBHHHHHHHT-TCHHHHHHHHH
T ss_pred cccHHHHHHHH-HHHHHHHHHHH
Confidence 89999999998 88899999843
No 72
>PHA02792 ankyrin-like protein; Provisional
Probab=93.30 E-value=0.16 Score=61.64 Aligned_cols=43 Identities=16% Similarity=0.180 Sum_probs=37.6
Q ss_pred hchHHHHHHHcCChhHHHHHHhhcccCCCCCCCccccCCCCCCCCCCchhhhhcc
Q 002028 889 EIQLLNRAVKMKCRRMVDLLIHYSLTSSNDTPQKYIFPPNLAGPGGITPLHLAAC 943 (978)
Q Consensus 889 e~~LLH~AV~~~s~~mVelLL~~~~~~~~~~~~~y~F~pd~~GpsGlTPLHIAAs 943 (978)
+.||||.|++.++.++|++|+.... +++..+..|.||||+|+.
T Consensus 410 G~TPLh~Aa~~~n~eivelLLs~GA------------DIN~kD~~G~TpL~~A~~ 452 (631)
T PHA02792 410 GRSILYYCIESHSVSLVEWLIDNGA------------DINITTKYGSTCIGICVI 452 (631)
T ss_pred CcchHHHHHHcCCHHHHHHHHHCCC------------CCCCcCCCCCCHHHHHHH
Confidence 6799999999999999999998752 356678899999999986
No 73
>KOG0505 consensus Myosin phosphatase, regulatory subunit [Posttranslational modification, protein turnover, chaperones; Signal transduction mechanisms]
Probab=93.22 E-value=0.088 Score=62.16 Aligned_cols=55 Identities=27% Similarity=0.278 Sum_probs=45.2
Q ss_pred hhchHHHHHHHcCChhHHHHHHhhcccCCCCCCCccccCCCCCCCCCCchhhhhcccCChhHHHHHhh
Q 002028 888 WEIQLLNRAVKMKCRRMVDLLIHYSLTSSNDTPQKYIFPPNLAGPGGITPLHLAACTSDSDDIIDALT 955 (978)
Q Consensus 888 ~e~~LLH~AV~~~s~~mVelLL~~~~~~~~~~~~~y~F~pd~~GpsGlTPLHIAAs~~g~~~vldaLt 955 (978)
.++|.||=||.-.+..||.||+.|.- ..+..+--||||||.||+- +-.+|+..|-
T Consensus 72 DglTalhq~~id~~~e~v~~l~e~ga------------~Vn~~d~e~wtPlhaaasc-g~~~i~~~li 126 (527)
T KOG0505|consen 72 DGLTALHQACIDDNLEMVKFLVENGA------------NVNAQDNEGWTPLHAAASC-GYLNIVEYLI 126 (527)
T ss_pred ccchhHHHHHhcccHHHHHHHHHhcC------------CccccccccCCcchhhccc-ccHHHHHHHH
Confidence 47899999999999999999999862 1334588999999999887 7777777663
No 74
>KOG0505 consensus Myosin phosphatase, regulatory subunit [Posttranslational modification, protein turnover, chaperones; Signal transduction mechanisms]
Probab=92.93 E-value=0.093 Score=61.98 Aligned_cols=52 Identities=27% Similarity=0.312 Sum_probs=46.0
Q ss_pred chHHHHHHHcCChhHHHHHHhhcccCCCCCCCccccCCCCCCCCCCchhhhhcccCChhHHHHHh
Q 002028 890 IQLLNRAVKMKCRRMVDLLIHYSLTSSNDTPQKYIFPPNLAGPGGITPLHLAACTSDSDDIIDAL 954 (978)
Q Consensus 890 ~~LLH~AV~~~s~~mVelLL~~~~~~~~~~~~~y~F~pd~~GpsGlTPLHIAAs~~g~~~vldaL 954 (978)
-|+||.|...+..+..+|||.. .+.+++.+--||||||-||.- +-+++..+|
T Consensus 199 ~T~lHvAaa~Gy~e~~~lLl~a------------g~~~~~~D~dgWtPlHAAA~W-g~~~~~elL 250 (527)
T KOG0505|consen 199 ATALHVAAANGYTEVAALLLQA------------GYSVNIKDYDGWTPLHAAAHW-GQEDACELL 250 (527)
T ss_pred chHHHHHHhhhHHHHHHHHHHh------------ccCcccccccCCCcccHHHHh-hhHhHHHHH
Confidence 4999999999999999999976 466888899999999999998 877887766
No 75
>PTZ00322 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase; Provisional
Probab=92.82 E-value=0.14 Score=62.37 Aligned_cols=52 Identities=21% Similarity=0.211 Sum_probs=44.5
Q ss_pred hHHHHHHHcCChhHHHHHHhhcccCCCCCCCccccCCCCCCCCCCchhhhhcccCChhHHHHHhh
Q 002028 891 QLLNRAVKMKCRRMVDLLIHYSLTSSNDTPQKYIFPPNLAGPGGITPLHLAACTSDSDDIIDALT 955 (978)
Q Consensus 891 ~LLH~AV~~~s~~mVelLL~~~~~~~~~~~~~y~F~pd~~GpsGlTPLHIAAs~~g~~~vldaLt 955 (978)
..||.|++.|..++|++||... .+++..+..|.||||+||.. +..+++..|.
T Consensus 84 ~~L~~aa~~G~~~~vk~LL~~G------------adin~~d~~G~TpLh~Aa~~-g~~eiv~~LL 135 (664)
T PTZ00322 84 VELCQLAASGDAVGARILLTGG------------ADPNCRDYDGRTPLHIACAN-GHVQVVRVLL 135 (664)
T ss_pred HHHHHHHHcCCHHHHHHHHHCC------------CCCCCcCCCCCcHHHHHHHC-CCHHHHHHHH
Confidence 4689999999999999999764 34677788999999999987 8888999883
No 76
>KOG0514 consensus Ankyrin repeat protein [General function prediction only]
Probab=92.54 E-value=0.18 Score=57.72 Aligned_cols=74 Identities=23% Similarity=0.161 Sum_probs=59.5
Q ss_pred hhchHHHHHHHcCChhHHHHHHhhcccCCCCCCCccccCCCCCCCCCCchhhhhcccCChhHHHHHhhcCcc-------h
Q 002028 888 WEIQLLNRAVKMKCRRMVDLLIHYSLTSSNDTPQKYIFPPNLAGPGGITPLHLAACTSDSDDIIDALTNDPQ-------E 960 (978)
Q Consensus 888 ~e~~LLH~AV~~~s~~mVelLL~~~~~~~~~~~~~y~F~pd~~GpsGlTPLHIAAs~~g~~~vldaLt~DP~-------~ 960 (978)
.+.|.|.+||+-|..+||++||.-. =+.++-|-.|-|.||.||-- |--+|+.+|...|. -
T Consensus 339 ~gQTALMLAVSHGr~d~vk~LLacg------------AdVNiQDdDGSTALMCA~EH-GhkEivklLLA~p~cd~sLtD~ 405 (452)
T KOG0514|consen 339 HGQTALMLAVSHGRVDMVKALLACG------------ADVNIQDDDGSTALMCAAEH-GHKEIVKLLLAVPSCDISLTDV 405 (452)
T ss_pred hcchhhhhhhhcCcHHHHHHHHHcc------------CCCccccCCccHHHhhhhhh-ChHHHHHHHhccCcccceeecC
Confidence 4679999999999999999999864 24567799999999999876 99999999954443 4
Q ss_pred hhHHHHHHhhhccc
Q 002028 961 VSYSIFLLQLSAHL 974 (978)
Q Consensus 961 vGl~aW~~A~d~~~ 974 (978)
.|-.|..-||++--
T Consensus 406 DgSTAl~IAleagh 419 (452)
T KOG0514|consen 406 DGSTALSIALEAGH 419 (452)
T ss_pred CCchhhhhHHhcCc
Confidence 56777777777643
No 77
>KOG0522 consensus Ankyrin repeat protein [General function prediction only]
Probab=92.42 E-value=0.27 Score=58.30 Aligned_cols=81 Identities=19% Similarity=0.194 Sum_probs=55.5
Q ss_pred ccchHHHHHHHHHHHHhccccCCCccHHHHHHhhhchHHHHHHHcCChhHHHHHHhhcccCCCCCCCccccCCCCCCCCC
Q 002028 855 DRGCCALVKAILDILVEGNLSMDGLSRESLEMLWEIQLLNRAVKMKCRRMVDLLIHYSLTSSNDTPQKYIFPPNLAGPGG 934 (978)
Q Consensus 855 erdWcAVvkkLLdiL~~g~v~~~~~s~~~~~~l~e~~LLH~AV~~~s~~mVelLL~~~~~~~~~~~~~y~F~pd~~GpsG 934 (978)
..+|-.+.+.|+.- ..+.++..+. - +-||||.||+-++..-+++|++-.. +.-+....|
T Consensus 30 ~~~~~sl~~el~~~-~~~~id~~D~-------~-g~TpLhlAV~Lg~~~~a~~Ll~a~A------------dv~~kN~~g 88 (560)
T KOG0522|consen 30 TTDSDSLEQELLAK-VSLVIDRRDP-------P-GRTPLHLAVRLGHVEAARILLSAGA------------DVSIKNNEG 88 (560)
T ss_pred ccchhhHHHHHhhh-hhceeccccC-------C-CCccHHHHHHhcCHHHHHHHHhcCC------------Ccccccccc
Confidence 45666777766655 4444443322 2 4699999999999999999997641 011336789
Q ss_pred CchhhhhcccCChhHHHHHhhc
Q 002028 935 ITPLHLAACTSDSDDIIDALTN 956 (978)
Q Consensus 935 lTPLHIAAs~~g~~~vldaLt~ 956 (978)
|||||-|+|..+..-|..+|.+
T Consensus 89 Ws~L~EAv~~g~~q~i~~vlr~ 110 (560)
T KOG0522|consen 89 WSPLHEAVSTGNEQIITEVLRH 110 (560)
T ss_pred ccHHHHHHHcCCHHHHHHHHHH
Confidence 9999999999544445555533
No 78
>TIGR00870 trp transient-receptor-potential calcium channel protein. after chronic exposure to capsaicin. (McCleskey and Gold, 1999).
Probab=92.35 E-value=0.19 Score=61.22 Aligned_cols=21 Identities=19% Similarity=0.302 Sum_probs=12.8
Q ss_pred hHHH-HHHHcCChhHHHHHHhh
Q 002028 891 QLLN-RAVKMKCRRMVDLLIHY 911 (978)
Q Consensus 891 ~LLH-~AV~~~s~~mVelLL~~ 911 (978)
++|| .|+..++.+||++|+.+
T Consensus 54 t~Lh~~A~~~~~~eiv~lLl~~ 75 (743)
T TIGR00870 54 SALFVAAIENENLELTELLLNL 75 (743)
T ss_pred hHHHHHHHhcChHHHHHHHHhC
Confidence 5666 66666666666666644
No 79
>KOG3676 consensus Ca2+-permeable cation channel OSM-9 and related channels (OTRPC family) [Inorganic ion transport and metabolism; Signal transduction mechanisms]
Probab=91.48 E-value=0.2 Score=61.73 Aligned_cols=67 Identities=24% Similarity=0.333 Sum_probs=51.7
Q ss_pred hhchHHHHHHHcCChhHHHHHHhhcccCCCCCCCccccCCCCCCCC------------CCchhhhhcccCChhHHHHHhh
Q 002028 888 WEIQLLNRAVKMKCRRMVDLLIHYSLTSSNDTPQKYIFPPNLAGPG------------GITPLHLAACTSDSDDIIDALT 955 (978)
Q Consensus 888 ~e~~LLH~AV~~~s~~mVelLL~~~~~~~~~~~~~y~F~pd~~Gps------------GlTPLHIAAs~~g~~~vldaLt 955 (978)
.|.++||.|+-+.+.++|.+||.-...... ...+=-|.|+-...+ |-.||-+|||+ +.++|+.+|.
T Consensus 183 ~GqSaLHiAIv~~~~~~V~lLl~~gADV~a-Ra~G~FF~~~dqk~~rk~T~Y~G~~YfGEyPLSfAAC~-nq~eivrlLl 260 (782)
T KOG3676|consen 183 YGQSALHIAIVNRDAELVRLLLAAGADVHA-RACGAFFCPDDQKASRKSTNYTGYFYFGEYPLSFAACT-NQPEIVRLLL 260 (782)
T ss_pred cCcchHHHHHHhccHHHHHHHHHcCCchhh-HhhccccCcccccccccccCCcceeeeccCchHHHHHc-CCHHHHHHHH
Confidence 367999999999999999999986531111 123335778665566 89999999999 9999999994
Q ss_pred c
Q 002028 956 N 956 (978)
Q Consensus 956 ~ 956 (978)
.
T Consensus 261 ~ 261 (782)
T KOG3676|consen 261 A 261 (782)
T ss_pred h
Confidence 3
No 80
>PHA02792 ankyrin-like protein; Provisional
Probab=91.07 E-value=0.86 Score=55.67 Aligned_cols=64 Identities=17% Similarity=0.170 Sum_probs=44.2
Q ss_pred chHHHHHHHcCChhHHHHHHhhccc--CCCCCCC--------------------c----cccCCCCCCCCCCchhhhhcc
Q 002028 890 IQLLNRAVKMKCRRMVDLLIHYSLT--SSNDTPQ--------------------K----YIFPPNLAGPGGITPLHLAAC 943 (978)
Q Consensus 890 ~~LLH~AV~~~s~~mVelLL~~~~~--~~~~~~~--------------------~----y~F~pd~~GpsGlTPLHIAAs 943 (978)
++.+|.|+..+..++|++|+..... ..|.... . |.-+.+..+..|+||||+|+.
T Consensus 340 ~n~~~~Aa~~gn~eIVelLIs~GADIN~kD~~g~~~TpLh~A~~n~~~~v~~IlklLIs~GADIN~kD~~G~TPLh~Aa~ 419 (631)
T PHA02792 340 INKYFQKFDNRDPKVVEYILKNGNVVVEDDDNIINIMPLFPTLSIHESDVLSILKLCKPYIDDINKIDKHGRSILYYCIE 419 (631)
T ss_pred chHHHHHHHcCCHHHHHHHHHcCCchhhhcCCCCChhHHHHHHHhccHhHHHHHHHHHhcCCccccccccCcchHHHHHH
Confidence 4567888888888888888877652 1121100 0 112455668889999999997
Q ss_pred cCChhHHHHHh
Q 002028 944 TSDSDDIIDAL 954 (978)
Q Consensus 944 ~~g~~~vldaL 954 (978)
. +..++++.|
T Consensus 420 ~-~n~eivelL 429 (631)
T PHA02792 420 S-HSVSLVEWL 429 (631)
T ss_pred c-CCHHHHHHH
Confidence 6 778899988
No 81
>KOG4214 consensus Myotrophin and similar proteins [Transcription]
Probab=90.98 E-value=0.35 Score=46.72 Aligned_cols=57 Identities=25% Similarity=0.230 Sum_probs=45.1
Q ss_pred HHhhhchHHHHHHHcCChhHHHHHHhhcccCCCCCCCccccCCCCCCCCCCchhhhhcccCChhHHHHHh
Q 002028 885 EMLWEIQLLNRAVKMKCRRMVDLLIHYSLTSSNDTPQKYIFPPNLAGPGGITPLHLAACTSDSDDIIDAL 954 (978)
Q Consensus 885 ~~l~e~~LLH~AV~~~s~~mVelLL~~~~~~~~~~~~~y~F~pd~~GpsGlTPLHIAAs~~g~~~vldaL 954 (978)
+.+++-+|||.|+-.+..++++||++-.. .-+..+--|+||| ++|.-.|-.+-+++|
T Consensus 30 ~~~ggR~plhyAAD~GQl~ilefli~iGA------------~i~~kDKygITPL-LsAvwEGH~~cVklL 86 (117)
T KOG4214|consen 30 EIYGGRTPLHYAADYGQLSILEFLISIGA------------NIQDKDKYGITPL-LSAVWEGHRDCVKLL 86 (117)
T ss_pred HHhCCcccchHhhhcchHHHHHHHHHhcc------------ccCCccccCCcHH-HHHHHHhhHHHHHHH
Confidence 44578899999999999999999997652 1223467899999 566666888888888
No 82
>KOG0507 consensus CASK-interacting adaptor protein (caskin) and related proteins with ankyrin repeats and SAM domain [Signal transduction mechanisms]
Probab=90.96 E-value=0.17 Score=61.95 Aligned_cols=84 Identities=25% Similarity=0.174 Sum_probs=43.3
Q ss_pred HHHHHHhccchHHHHHHHHHHHHhccccCCCccHHHHHHhhhchHHHHHHHcCChhHHHHHHhhcccCCCCCCCccccCC
Q 002028 848 FLLVFSVDRGCCALVKAILDILVEGNLSMDGLSRESLEMLWEIQLLNRAVKMKCRRMVDLLIHYSLTSSNDTPQKYIFPP 927 (978)
Q Consensus 848 ~LL~FAverdWcAVvkkLLdiL~~g~v~~~~~s~~~~~~l~e~~LLH~AV~~~s~~mVelLL~~~~~~~~~~~~~y~F~p 927 (978)
-+|.-|+=++=..+++.||+- ++.-+... -.+|.+||.|...|+.++|.+||.-. | -+
T Consensus 51 Talhha~Lng~~~is~llle~---------ea~ldl~d-~kg~~plhlaaw~g~~e~vkmll~q~----d--------~~ 108 (854)
T KOG0507|consen 51 TLLHHAVLNGQNQISKLLLDY---------EALLDLCD-TKGILPLHLAAWNGNLEIVKMLLLQT----D--------IL 108 (854)
T ss_pred hHHHHHHhcCchHHHHHHhcc---------hhhhhhhh-ccCcceEEehhhcCcchHHHHHHhcc----c--------CC
Confidence 356667777777777776651 11111111 13556666666666666666665332 0 02
Q ss_pred CCCCCCCCchhhhhcccCChhHHHHHh
Q 002028 928 NLAGPGGITPLHLAACTSDSDDIIDAL 954 (978)
Q Consensus 928 d~~GpsGlTPLHIAAs~~g~~~vldaL 954 (978)
++.--.|.||||+||+- +.-||+..|
T Consensus 109 na~~~e~~tplhlaaqh-gh~dvv~~L 134 (854)
T KOG0507|consen 109 NAVNIENETPLHLAAQH-GHLEVVFYL 134 (854)
T ss_pred CcccccCcCccchhhhh-cchHHHHHH
Confidence 33344556666666655 444555554
No 83
>PF13857 Ank_5: Ankyrin repeats (many copies); PDB: 1SW6_A 3EHR_B 3EHQ_A.
Probab=90.60 E-value=0.15 Score=42.75 Aligned_cols=30 Identities=30% Similarity=0.307 Sum_probs=19.7
Q ss_pred cCCCCCCCCCCchhhhhcccCChhHHHHHhh
Q 002028 925 FPPNLAGPGGITPLHLAACTSDSDDIIDALT 955 (978)
Q Consensus 925 F~pd~~GpsGlTPLHIAAs~~g~~~vldaLt 955 (978)
-+++..+..|-||||+||.. |..+++..|.
T Consensus 7 ~~~n~~d~~G~T~LH~A~~~-g~~~~v~~Ll 36 (56)
T PF13857_consen 7 ADVNAQDKYGNTPLHWAARY-GHSEVVRLLL 36 (56)
T ss_dssp --TT---TTS--HHHHHHHH-T-HHHHHHHH
T ss_pred CCCcCcCCCCCcHHHHHHHc-CcHHHHHHHH
Confidence 34667799999999999996 8889999995
No 84
>KOG0508 consensus Ankyrin repeat protein [General function prediction only]
Probab=89.40 E-value=0.51 Score=55.70 Aligned_cols=54 Identities=28% Similarity=0.372 Sum_probs=43.3
Q ss_pred hchHHHHHHHcCChhHHHHHHhhcccCCCCCCCccccCCCCCCCCCCchhhhhcccCChhHHHHHhhc
Q 002028 889 EIQLLNRAVKMKCRRMVDLLIHYSLTSSNDTPQKYIFPPNLAGPGGITPLHLAACTSDSDDIIDALTN 956 (978)
Q Consensus 889 e~~LLH~AV~~~s~~mVelLL~~~~~~~~~~~~~y~F~pd~~GpsGlTPLHIAAs~~g~~~vldaLt~ 956 (978)
+-|.||-|.-+++.++|++||.|.. .-++ +.-|.|||..||-. |--+|++.|.+
T Consensus 183 GNTALH~caEsG~vdivq~Ll~~ga------------~i~~-d~~GmtPL~~Aa~t-G~~~iVe~L~~ 236 (615)
T KOG0508|consen 183 GNTALHDCAESGSVDIVQLLLKHGA------------KIDV-DGHGMTPLLLAAVT-GHTDIVERLLQ 236 (615)
T ss_pred CchHHHhhhhcccHHHHHHHHhCCc------------eeee-cCCCCchHHHHhhh-cchHHHHHHhc
Confidence 6699999999999999999998863 2334 45599999988766 87788887753
No 85
>KOG0508 consensus Ankyrin repeat protein [General function prediction only]
Probab=89.11 E-value=0.46 Score=56.00 Aligned_cols=52 Identities=25% Similarity=0.174 Sum_probs=36.5
Q ss_pred chHHHHHHHcCChhHHHHHHhhcccCCCCCCCccccCCCCCCCCCCchhhhhcccCChhHHHHHh
Q 002028 890 IQLLNRAVKMKCRRMVDLLIHYSLTSSNDTPQKYIFPPNLAGPGGITPLHLAACTSDSDDIIDAL 954 (978)
Q Consensus 890 ~~LLH~AV~~~s~~mVelLL~~~~~~~~~~~~~y~F~pd~~GpsGlTPLHIAAs~~g~~~vldaL 954 (978)
-|||--|+--|+.++|..|+.. .|+|.++...|-|-|||||.. |..||+..|
T Consensus 118 StPLraACfDG~leivKyLvE~------------gad~~IanrhGhTcLmIa~yk-Gh~~I~qyL 169 (615)
T KOG0508|consen 118 STPLRAACFDGHLEIVKYLVEH------------GADPEIANRHGHTCLMIACYK-GHVDIAQYL 169 (615)
T ss_pred CccHHHHHhcchhHHHHHHHHc------------CCCCcccccCCCeeEEeeecc-CchHHHHHH
Confidence 4777777777777777777754 466777777777777776665 666777666
No 86
>KOG3609 consensus Receptor-activated Ca2+-permeable cation channels (STRPC family) [Inorganic ion transport and metabolism; Signal transduction mechanisms]
Probab=89.06 E-value=0.41 Score=59.33 Aligned_cols=114 Identities=25% Similarity=0.334 Sum_probs=70.1
Q ss_pred HHHHHHHHHHHhccchHHHHHHHHHHHHhccc-----c----------CCCccHHHHHHhhh-----chHHHHHHHcCCh
Q 002028 843 LSRFKFLLVFSVDRGCCALVKAILDILVEGNL-----S----------MDGLSRESLEMLWE-----IQLLNRAVKMKCR 902 (978)
Q Consensus 843 ~~RFk~LL~FAverdWcAVvkkLLdiL~~g~v-----~----------~~~~s~~~~~~l~e-----~~LLH~AV~~~s~ 902 (978)
..-.++|+ |+|+|=-.+|+|.|.-...+.+ + .+...-+.+++|.. -..|-.|++.+.+
T Consensus 24 ~~e~~fL~--a~E~gd~~~V~k~l~~~~~~~lninc~d~lGr~al~iai~nenle~~eLLl~~~~~~gdALL~aI~~~~v 101 (822)
T KOG3609|consen 24 EGEKGFLL--AHENGDVPLVAKALEYKAVSKLNINCRDPLGRLALHIAIDNENLELQELLLDTSSEEGDALLLAIAVGSV 101 (822)
T ss_pred hhhHHHHH--HHHcCChHHHHHHHHhccccccchhccChHhhhceecccccccHHHHHHHhcCccccchHHHHHHHHHHH
Confidence 33444554 5788888888887763322111 1 11112345555522 2456678888888
Q ss_pred hHHHHHHhhcccC----CCCCCCccccCCCCCCCCCCchhhhhcccCChhHHHHHh------hcCcchhhHHH
Q 002028 903 RMVDLLIHYSLTS----SNDTPQKYIFPPNLAGPGGITPLHLAACTSDSDDIIDAL------TNDPQEVSYSI 965 (978)
Q Consensus 903 ~mVelLL~~~~~~----~~~~~~~y~F~pd~~GpsGlTPLHIAAs~~g~~~vldaL------t~DP~~vGl~a 965 (978)
+.||+||.+.... ..++.....|.|| +|||.+||-. .+-+|+..| ..-|..+.+.|
T Consensus 102 ~~VE~ll~~~~~~~~~~~~~d~~~~~ft~d------itPliLAAh~-NnyEil~~Ll~kg~~i~~PH~~~C~C 167 (822)
T KOG3609|consen 102 PLVELLLVHFVDAPYLERSGDANSPHFTPD------ITPLMLAAHL-NNFEILQCLLTRGHCIPIPHDIRCEC 167 (822)
T ss_pred HHHHHHHhcccccchhccccccCcccCCCC------ccHHHHHHHh-cchHHHHHHHHcCCCCCCCcccccCc
Confidence 8888888754311 1123345666664 5999999999 888999998 44566666655
No 87
>KOG0782 consensus Predicted diacylglycerol kinase [Signal transduction mechanisms]
Probab=88.23 E-value=0.21 Score=59.50 Aligned_cols=54 Identities=26% Similarity=0.322 Sum_probs=44.7
Q ss_pred chHHHHHHHcCChhHHHHHHhhcccCCCCCCCccccCCCCCCCCCCchhhhhcccCChhHHHHHh
Q 002028 890 IQLLNRAVKMKCRRMVDLLIHYSLTSSNDTPQKYIFPPNLAGPGGITPLHLAACTSDSDDIIDAL 954 (978)
Q Consensus 890 ~~LLH~AV~~~s~~mVelLL~~~~~~~~~~~~~y~F~pd~~GpsGlTPLHIAAs~~g~~~vldaL 954 (978)
-+|||.||+-++.++|++||...|. =-.|+++..|-|.||-||+. ++..|-.+|
T Consensus 900 ~sllh~a~~tg~~eivkyildh~p~----------elld~~de~get~lhkaa~~-~~r~vc~~l 953 (1004)
T KOG0782|consen 900 CSLLHYAAKTGNGEIVKYILDHGPS----------ELLDMADETGETALHKAACQ-RNRAVCQLL 953 (1004)
T ss_pred hhHHHHHHhcCChHHHHHHHhcCCH----------HHHHHHhhhhhHHHHHHHHh-cchHHHHHH
Confidence 4899999999999999999998861 11356789999999999999 666666666
No 88
>KOG0502 consensus Integral membrane ankyrin-repeat protein Kidins220 (protein kinase D substrate) [General function prediction only]
Probab=87.92 E-value=0.85 Score=49.71 Aligned_cols=83 Identities=20% Similarity=0.277 Sum_probs=48.8
Q ss_pred HHHHHhccchHHHHHHHHHHHHhccccCCCccHHHHHHhhhchHHHHHHHcCChhHHHHHHhhcccCCCCCCCccccCCC
Q 002028 849 LLVFSVDRGCCALVKAILDILVEGNLSMDGLSRESLEMLWEIQLLNRAVKMKCRRMVDLLIHYSLTSSNDTPQKYIFPPN 928 (978)
Q Consensus 849 LL~FAverdWcAVvkkLLdiL~~g~v~~~~~s~~~~~~l~e~~LLH~AV~~~s~~mVelLL~~~~~~~~~~~~~y~F~pd 928 (978)
-|++|-.+|=..||.+||+--.+ +..+.+- -.+.|.+|.+.|..++|++||.-.+ +.+
T Consensus 163 pLiWAaa~G~i~vV~fLL~~GAd---------p~~lgk~-resALsLAt~ggytdiV~lLL~r~v------------dVN 220 (296)
T KOG0502|consen 163 PLIWAAAKGHIPVVQFLLNSGAD---------PDALGKY-RESALSLATRGGYTDIVELLLTREV------------DVN 220 (296)
T ss_pred HhHHHHhcCchHHHHHHHHcCCC---------hhhhhhh-hhhhHhHHhcCChHHHHHHHHhcCC------------Ccc
Confidence 36677777888888888864322 1233333 2367777777777777777775432 223
Q ss_pred CCCCCCCchhhhhcccCChhHHHHHh
Q 002028 929 LAGPGGITPLHLAACTSDSDDIIDAL 954 (978)
Q Consensus 929 ~~GpsGlTPLHIAAs~~g~~~vldaL 954 (978)
+.+=.|.|||-.|+-- +-.++++.|
T Consensus 221 vyDwNGgTpLlyAvrg-nhvkcve~L 245 (296)
T KOG0502|consen 221 VYDWNGGTPLLYAVRG-NHVKCVESL 245 (296)
T ss_pred eeccCCCceeeeeecC-ChHHHHHHH
Confidence 3345566666665543 445555555
No 89
>KOG0520 consensus Uncharacterized conserved protein, contains IPT/TIG domain [Function unknown]
Probab=85.72 E-value=0.67 Score=58.55 Aligned_cols=66 Identities=17% Similarity=0.327 Sum_probs=49.2
Q ss_pred hhchHHHHHHHcCChhHHHHHHhhcccC-----CCCCC------------CccccCC-----CCCCCCCCchhhhhcccC
Q 002028 888 WEIQLLNRAVKMKCRRMVDLLIHYSLTS-----SNDTP------------QKYIFPP-----NLAGPGGITPLHLAACTS 945 (978)
Q Consensus 888 ~e~~LLH~AV~~~s~~mVelLL~~~~~~-----~~~~~------------~~y~F~p-----d~~GpsGlTPLHIAAs~~ 945 (978)
-+|+|||.|......-+++-|+.|.-.. .|+.. ..++|.. |+++-.||||||+||.-
T Consensus 573 r~~lllhL~a~~lyawLie~~~e~~~~~~~eld~d~qgV~hfca~lg~ewA~ll~~~~~~ai~i~D~~G~tpL~wAa~~- 651 (975)
T KOG0520|consen 573 RDMLLLHLLAELLYAWLIEKVIEWAGSGDLELDRDGQGVIHFCAALGYEWAFLPISADGVAIDIRDRNGWTPLHWAAFR- 651 (975)
T ss_pred cchHHHHHHHHHhHHHHHHHHhcccccCchhhcccCCChhhHhhhcCCceeEEEEeecccccccccCCCCcccchHhhc-
Confidence 3789999999999999999999982110 11111 1233332 56799999999999998
Q ss_pred ChhHHHHHh
Q 002028 946 DSDDIIDAL 954 (978)
Q Consensus 946 g~~~vldaL 954 (978)
|-+.+++.|
T Consensus 652 G~e~l~a~l 660 (975)
T KOG0520|consen 652 GREKLVASL 660 (975)
T ss_pred CHHHHHHHH
Confidence 888888888
No 90
>smart00248 ANK ankyrin repeats. Ankyrin repeats are about 33 amino acids long and occur in at least four consecutive copies. They are involved in protein-protein interactions. The core of the repeat seems to be an helix-loop-helix structure.
Probab=85.31 E-value=0.87 Score=29.63 Aligned_cols=24 Identities=21% Similarity=0.131 Sum_probs=21.7
Q ss_pred hchHHHHHHHcCChhHHHHHHhhc
Q 002028 889 EIQLLNRAVKMKCRRMVDLLIHYS 912 (978)
Q Consensus 889 e~~LLH~AV~~~s~~mVelLL~~~ 912 (978)
+.++||+|+..+..++|++|+.+.
T Consensus 2 ~~~~l~~~~~~~~~~~~~~ll~~~ 25 (30)
T smart00248 2 GRTPLHLAAENGNLEVVKLLLDKG 25 (30)
T ss_pred CCCHHHHHHHcCCHHHHHHHHHcC
Confidence 468999999999999999999875
No 91
>KOG0512 consensus Fetal globin-inducing factor (contains ankyrin repeats) [Transcription]
Probab=79.01 E-value=2.3 Score=45.16 Aligned_cols=53 Identities=30% Similarity=0.276 Sum_probs=36.1
Q ss_pred chHHHHHHHcCChhHHHHHHhhcccCCCCCCCccccCCCCCCCCCCchhhhhcccCChhHHHHHh
Q 002028 890 IQLLNRAVKMKCRRMVDLLIHYSLTSSNDTPQKYIFPPNLAGPGGITPLHLAACTSDSDDIIDAL 954 (978)
Q Consensus 890 ~~LLH~AV~~~s~~mVelLL~~~~~~~~~~~~~y~F~pd~~GpsGlTPLHIAAs~~g~~~vldaL 954 (978)
+.++-||+-.|....|+-||.-.++- .+..+..|.||||-||-- +-.||++.|
T Consensus 64 ~rl~lwaae~nrl~eV~~lL~e~an~-----------vNtrD~D~YTpLHRAaYn-~h~div~~l 116 (228)
T KOG0512|consen 64 IRLLLWAAEKNRLTEVQRLLSEKANH-----------VNTRDEDEYTPLHRAAYN-GHLDIVHEL 116 (228)
T ss_pred HHHHHHHHhhccHHHHHHHHHhcccc-----------ccccccccccHHHHHHhc-CchHHHHHH
Confidence 57999999999999999999876411 234455555555555544 555555555
No 92
>KOG0705 consensus GTPase-activating protein Centaurin gamma (contains Ras-like GTPase, PH and ankyrin repeat domains) [Signal transduction mechanisms]
Probab=75.38 E-value=2.9 Score=50.54 Aligned_cols=54 Identities=26% Similarity=0.209 Sum_probs=47.4
Q ss_pred hchHHHHHHHcCChhHHHHHHhhcccCCCCCCCccccCCCCCCCCCCchhhhhcccCChhHHHHHhh
Q 002028 889 EIQLLNRAVKMKCRRMVDLLIHYSLTSSNDTPQKYIFPPNLAGPGGITPLHLAACTSDSDDIIDALT 955 (978)
Q Consensus 889 e~~LLH~AV~~~s~~mVelLL~~~~~~~~~~~~~y~F~pd~~GpsGlTPLHIAAs~~g~~~vldaLt 955 (978)
+-|.||+|++.++.-+.+||+-| .+|.-+.|..|.|+|-.|-.. |+-+.+|.|.
T Consensus 661 grt~LHLa~~~gnVvl~QLLiWy------------g~dv~~rda~g~t~l~yar~a-~sqec~d~ll 714 (749)
T KOG0705|consen 661 GRTALHLAARKGNVVLAQLLIWY------------GVDVMARDAHGRTALFYARQA-GSQECIDVLL 714 (749)
T ss_pred CcchhhhhhhhcchhHHHHHHHh------------CccceecccCCchhhhhHhhc-ccHHHHHHHH
Confidence 46999999999999999999944 466667799999999999888 8999999993
No 93
>KOG0818 consensus GTPase-activating proteins of the GIT family [Signal transduction mechanisms]
Probab=73.87 E-value=3.9 Score=48.77 Aligned_cols=53 Identities=21% Similarity=0.275 Sum_probs=43.3
Q ss_pred hchHHHHHHHcCChhHHHHHHhhcccCCCCCCCccccCCCCCCCCCCchhhhhcccCC----hhHHHHHh
Q 002028 889 EIQLLNRAVKMKCRRMVDLLIHYSLTSSNDTPQKYIFPPNLAGPGGITPLHLAACTSD----SDDIIDAL 954 (978)
Q Consensus 889 e~~LLH~AV~~~s~~mVelLL~~~~~~~~~~~~~y~F~pd~~GpsGlTPLHIAAs~~g----~~~vldaL 954 (978)
+-||||.|+|.|...-||||+-|. =+|.+.+..|.||+-+|-.. | ++++++..
T Consensus 167 g~TpLHvAAk~Gq~~Q~ElL~vYG------------AD~~a~d~~GmtP~~~AR~~-gH~~laeRl~e~~ 223 (669)
T KOG0818|consen 167 GNTPLHVAAKAGQILQAELLAVYG------------ADPGAQDSSGMTPVDYARQG-GHHELAERLVEIQ 223 (669)
T ss_pred CCchhHHHHhccchhhhhHHhhcc------------CCCCCCCCCCCcHHHHHHhc-CchHHHHHHHHHH
Confidence 359999999999999999999885 46778899999999999766 4 55555543
No 94
>KOG2505 consensus Ankyrin repeat protein [General function prediction only]
Probab=73.87 E-value=2.4 Score=50.46 Aligned_cols=79 Identities=22% Similarity=0.296 Sum_probs=56.4
Q ss_pred HHHhccccCCCccHHHHHHhhhchHHHHHHHcCChhHHHHHHhhcccCCCCCCCccccCCCCCCCCCCchhhhhcccCCh
Q 002028 868 ILVEGNLSMDGLSRESLEMLWEIQLLNRAVKMKCRRMVDLLIHYSLTSSNDTPQKYIFPPNLAGPGGITPLHLAACTSDS 947 (978)
Q Consensus 868 iL~~g~v~~~~~s~~~~~~l~e~~LLH~AV~~~s~~mVelLL~~~~~~~~~~~~~y~F~pd~~GpsGlTPLHIAAs~~g~ 947 (978)
-++.|+++.. ++....+ --|+||.|+..+..+||..||.-. -||.+-+..|.||-.|++ +
T Consensus 413 n~lsgnf~~~---pe~~~~l-tsT~LH~aa~qg~~k~v~~~Leeg------------~Dp~~kd~~Grtpy~ls~----n 472 (591)
T KOG2505|consen 413 NLLSGNFDVT---PEANDYL-TSTFLHYAAAQGARKCVKYFLEEG------------CDPSTKDGAGRTPYSLSA----N 472 (591)
T ss_pred cCCccccccc---ccccccc-cchHHHHHHhcchHHHHHHHHHhc------------CCchhcccCCCCcccccc----c
Confidence 3444554432 3445555 459999999999999999999763 568888999999999998 4
Q ss_pred hHHHHHhhcCcchhhHHHHH
Q 002028 948 DDIIDALTNDPQEVSYSIFL 967 (978)
Q Consensus 948 ~~vldaLt~DP~~vGl~aW~ 967 (978)
.||-+... +=...|.+.|+
T Consensus 473 kdVk~~F~-a~~~l~es~~n 491 (591)
T KOG2505|consen 473 KDVKSIFI-ARRVLNESFGN 491 (591)
T ss_pred HHHHHHHH-HHHHhcccccc
Confidence 45666654 22456666664
No 95
>KOG4214 consensus Myotrophin and similar proteins [Transcription]
Probab=73.37 E-value=7.7 Score=37.87 Aligned_cols=81 Identities=22% Similarity=0.344 Sum_probs=53.2
Q ss_pred HHHHHHhccchHHHHHHHHHHHHhccccCCCccHHHHHHhhhchHHHHHHHcCChhHHHHHHhhcccCCCCCCCccccCC
Q 002028 848 FLLVFSVDRGCCALVKAILDILVEGNLSMDGLSRESLEMLWEIQLLNRAVKMKCRRMVDLLIHYSLTSSNDTPQKYIFPP 927 (978)
Q Consensus 848 ~LL~FAverdWcAVvkkLLdiL~~g~v~~~~~s~~~~~~l~e~~LLH~AV~~~s~~mVelLL~~~~~~~~~~~~~y~F~p 927 (978)
.-|-||-|-+=..++.+|+-+-.+ ...... .+||||.-||--++++-|+|||+... +-
T Consensus 36 ~plhyAAD~GQl~ilefli~iGA~----i~~kDK------ygITPLLsAvwEGH~~cVklLL~~GA------------dr 93 (117)
T KOG4214|consen 36 TPLHYAADYGQLSILEFLISIGAN----IQDKDK------YGITPLLSAVWEGHRDCVKLLLQNGA------------DR 93 (117)
T ss_pred ccchHhhhcchHHHHHHHHHhccc----cCCccc------cCCcHHHHHHHHhhHHHHHHHHHcCc------------cc
Confidence 445666666666666666555433 222222 48999999999999999999998752 11
Q ss_pred CCCCCCCCchhhhhcccCChhHHHHHh
Q 002028 928 NLAGPGGITPLHLAACTSDSDDIIDAL 954 (978)
Q Consensus 928 d~~GpsGlTPLHIAAs~~g~~~vldaL 954 (978)
.+.+|.|.|-+- ++ +.++|-.+|
T Consensus 94 t~~~PdG~~~~e---at-e~edIr~LL 116 (117)
T KOG4214|consen 94 TIHAPDGTALIE---AT-EEEDIRELL 116 (117)
T ss_pred ceeCCCchhHHh---hc-cHHHHHHHh
Confidence 255788877543 22 566666655
No 96
>KOG0514 consensus Ankyrin repeat protein [General function prediction only]
Probab=73.22 E-value=6.5 Score=45.68 Aligned_cols=84 Identities=25% Similarity=0.242 Sum_probs=64.4
Q ss_pred HHHHHhccchHHHHHHHHHHHHhccccCCCccHHHHHHhhhchHHHHHHHcCChhHHHHHHhhcccCCCCCCCccccCCC
Q 002028 849 LLVFSVDRGCCALVKAILDILVEGNLSMDGLSRESLEMLWEIQLLNRAVKMKCRRMVDLLIHYSLTSSNDTPQKYIFPPN 928 (978)
Q Consensus 849 LL~FAverdWcAVvkkLLdiL~~g~v~~~~~s~~~~~~l~e~~LLH~AV~~~s~~mVelLL~~~~~~~~~~~~~y~F~pd 928 (978)
-|..||-||=.-+||.||.--.+-++.-+ .+-|.|.-|+--|+++||.+||.- | .-+.-
T Consensus 343 ALMLAVSHGr~d~vk~LLacgAdVNiQDd----------DGSTALMCA~EHGhkEivklLLA~-p----------~cd~s 401 (452)
T KOG0514|consen 343 ALMLAVSHGRVDMVKALLACGADVNIQDD----------DGSTALMCAAEHGHKEIVKLLLAV-P----------SCDIS 401 (452)
T ss_pred hhhhhhhcCcHHHHHHHHHccCCCccccC----------CccHHHhhhhhhChHHHHHHHhcc-C----------cccce
Confidence 46789999999999999987666555433 356889999999999999999953 3 22233
Q ss_pred CCCCCCCchhhhhcccCChhHHHHHh
Q 002028 929 LAGPGGITPLHLAACTSDSDDIIDAL 954 (978)
Q Consensus 929 ~~GpsGlTPLHIAAs~~g~~~vldaL 954 (978)
+.|-.|-|.|+||--. |-.+|.-.|
T Consensus 402 LtD~DgSTAl~IAlea-gh~eIa~ml 426 (452)
T KOG0514|consen 402 LTDVDGSTALSIALEA-GHREIAVML 426 (452)
T ss_pred eecCCCchhhhhHHhc-CchHHHHHH
Confidence 5678899999999766 666676666
No 97
>KOG0507 consensus CASK-interacting adaptor protein (caskin) and related proteins with ankyrin repeats and SAM domain [Signal transduction mechanisms]
Probab=73.04 E-value=2.9 Score=51.94 Aligned_cols=54 Identities=19% Similarity=0.129 Sum_probs=47.1
Q ss_pred hhchHHHHHHHcCChhHHHHHHhhcccCCCCCCCccccCCCCCCCCCCchhhhhcccCChhHHHHHh
Q 002028 888 WEIQLLNRAVKMKCRRMVDLLIHYSLTSSNDTPQKYIFPPNLAGPGGITPLHLAACTSDSDDIIDAL 954 (978)
Q Consensus 888 ~e~~LLH~AV~~~s~~mVelLL~~~~~~~~~~~~~y~F~pd~~GpsGlTPLHIAAs~~g~~~vldaL 954 (978)
.+.++||.||..++.+.|++||.+. =+|-+..+++-|+|-+|+-. |..+|+..|
T Consensus 114 e~~tplhlaaqhgh~dvv~~Ll~~~------------adp~i~nns~~t~ldlA~qf-gr~~Vvq~l 167 (854)
T KOG0507|consen 114 ENETPLHLAAQHGHLEVVFYLLKKN------------ADPFIRNNSKETVLDLASRF-GRAEVVQML 167 (854)
T ss_pred cCcCccchhhhhcchHHHHHHHhcC------------CCccccCcccccHHHHHHHh-hhhHHHHHH
Confidence 3569999999999999999999885 34667899999999999999 877888777
No 98
>PF01833 TIG: IPT/TIG domain; InterPro: IPR002909 This family consists of a domain that has an immunoglobulin like fold. These domains are found in cell surface receptors such as Met and Ron as well as in intracellular transcription factors where it is involved in DNA binding. The Ron tyrosine kinase receptor shares with the members of its subfamily (Met and Sea) a unique functional feature: the control of cell dissociation, motility, and invasion of extracellular matrices (scattering) [].; GO: 0005515 protein binding; PDB: 3HRP_A 1UAD_D 3MLP_E 9CGT_A 3CGT_A 6CGT_A 4CGT_A 1CGT_A 7CGT_A 1CGU_A ....
Probab=72.66 E-value=17 Score=31.50 Aligned_cols=45 Identities=18% Similarity=0.227 Sum_probs=40.1
Q ss_pred CeeeEecceEEecCCeeEEEEEeecCCCCCceEEEeecCccccee
Q 002028 680 PELISVSPLAVVGGQELSFKLRGRNLTNLGTKIHCTFMGGYASQE 724 (978)
Q Consensus 680 P~I~~V~PiAv~ag~~~~f~v~G~NL~~p~tRLLcs~~GkYL~~E 724 (978)
|.|..|.|-.-.......+.|.|.||......+.|.+.+..-...
T Consensus 1 P~I~si~P~~~~~~gg~~ItI~G~~f~~~~~~~~v~i~~~~~~~~ 45 (85)
T PF01833_consen 1 PVITSISPNSGSISGGTNITITGSNFGSNSSNISVKIGGSQCTVI 45 (85)
T ss_dssp SEEEEEESSEEETTCTSEEEEEEESSESSSTTEEEEETTEEEEEE
T ss_pred CEEEEEECCeEecCCCEEEEEEEEeecccCCceEEEECCEeeeEE
Confidence 789999998888877999999999998889999999999877655
No 99
>cd00603 IPT_PCSR IPT domain of Plexins and Cell Surface Receptors (PCSR) and related proteins . This subgroup contains IPT domains of plexins, receptors, like the plasminogen-related growth factor receptors, the hepatocyte growth factor-scatter factors, and the macrophage-stimulating receptors and of fibrocystin. Plexins are involved in the regulation of cell proliferation and of cellular adhesion and repulsion receptors. In general, there are three copies of the IPT_PCSR domain present preceeded by SEMA (semaphorin) and PSI (plexin, semaphorin, integrin) domains.
Probab=69.19 E-value=18 Score=32.51 Aligned_cols=40 Identities=23% Similarity=0.278 Sum_probs=35.3
Q ss_pred CeeeEecceEEecCCeeEEEEEeecCCCCCceEEEeecCc
Q 002028 680 PELISVSPLAVVGGQELSFKLRGRNLTNLGTKIHCTFMGG 719 (978)
Q Consensus 680 P~I~~V~PiAv~ag~~~~f~v~G~NL~~p~tRLLcs~~Gk 719 (978)
|+|..++|..-....-+.+.++|.||.....++-|.+.|.
T Consensus 1 P~I~~i~P~~g~~~Ggt~vtI~G~~f~~~~~~~~V~ig~~ 40 (90)
T cd00603 1 PVITSISPSSGPLSGGTRLTITGSNLGSGSPRVRVTVGGV 40 (90)
T ss_pred CeEEEEcCCCCCCCCCeEEEEEEECCCCCCceEEEEECCE
Confidence 7899999999998888999999999999877888888664
No 100
>cd00102 IPT Immunoglobulin-like fold, Plexins, Transcription factors (IPT). IPTs are also known as Transcription factor ImmunoGlobin (TIG) domains. They are present in intracellular transcription factors, cell surface receptors (such as plexins and scatter factor receptors), as well as, cyclodextrin glycosyltransferase and similar enzymes. Although they are involved in DNA binding in transcription factors, their function in other proteins is unknown. In these transcription factors, IPTs form homo- or heterodimers with the exception of the nuclear factor of activated Tcells (NFAT) transcription factors which are mainly monomers.
Probab=60.80 E-value=32 Score=30.29 Aligned_cols=39 Identities=23% Similarity=0.304 Sum_probs=32.7
Q ss_pred CeeeEecceEEecCCeeEEEEEeecCCCCCceEEEee-cCc
Q 002028 680 PELISVSPLAVVGGQELSFKLRGRNLTNLGTKIHCTF-MGG 719 (978)
Q Consensus 680 P~I~~V~PiAv~ag~~~~f~v~G~NL~~p~tRLLcs~-~Gk 719 (978)
|+|..+.|..-....-+.+.++|.||.... ++-|.| .+.
T Consensus 1 P~I~~i~P~~g~~~GGt~itI~G~~f~~~~-~~~v~~~g~~ 40 (89)
T cd00102 1 PVITSISPSSGPVSGGTEVTITGSNFGSGS-NLRVTFGGGV 40 (89)
T ss_pred CEEeEEECCcCCCCCCeEEEEEEECCCCCC-cEEEEEeCCC
Confidence 789999999988888889999999998754 778888 443
No 101
>PF10866 DUF2704: Protein of unknown function (DUF2704); InterPro: IPR022594 This group of viral proteins has no known function.
Probab=59.37 E-value=7.6 Score=40.32 Aligned_cols=30 Identities=33% Similarity=0.752 Sum_probs=24.5
Q ss_pred hhHHHHHHHhcCCCc-------cccccccCCceEEEe
Q 002028 586 TLRKEIYNWLSNSPS-------EMESYIRPGCVILSL 615 (978)
Q Consensus 586 ~LR~QI~~WLs~~Pt-------eLEgYIRPGCvILTV 615 (978)
.++++|++-|.+.-. .--|||.|.|||+|.
T Consensus 123 T~kn~vLnVlnn~L~d~~~~~d~~~~yikpnciv~tf 159 (168)
T PF10866_consen 123 TFKNAVLNVLNNELSDEANEYDTSAGYIKPNCIVLTF 159 (168)
T ss_pred HHHHHHHHHHhhhccccccccccccCccCCCeEEEee
Confidence 578899999987544 346999999999995
No 102
>cd01180 IPT_plexin_repeat1 First repeat of the IPT domain of Plexins and Cell Surface Receptors (PCSR) . Plexins are involved in the regulation of cell proliferation and of cellular adhesion and repulsion receptors. In general, there are three copies of the IPT domain present preceeded by SEMA (semaphorin) and PSI (plexin, semaphorin, integrin) domains.
Probab=58.00 E-value=15 Score=34.10 Aligned_cols=40 Identities=18% Similarity=0.109 Sum_probs=34.3
Q ss_pred CeeeEecceEEecCCeeEEEEEeecCCCCC--ceEEEeecCc
Q 002028 680 PELISVSPLAVVGGQELSFKLRGRNLTNLG--TKIHCTFMGG 719 (978)
Q Consensus 680 P~I~~V~PiAv~ag~~~~f~v~G~NL~~p~--tRLLcs~~Gk 719 (978)
|+|..|+|.--....-+.+.++|.||.... .++.+.+.|.
T Consensus 1 P~I~~i~P~~Gp~~GGT~vTI~G~nl~~~~~~~~~~V~ig~~ 42 (94)
T cd01180 1 PVITEFFPLSGPLEGGTRLTICGSNLGLRKNDVRHGVRVGGV 42 (94)
T ss_pred CeeEEEeCCCCCCCCCEEEEEEEEcCCCCcccceeEEEECCE
Confidence 789999999999999999999999999875 4666777664
No 103
>PF09099 Qn_am_d_aIII: Quinohemoprotein amine dehydrogenase, alpha subunit domain III; InterPro: IPR015183 This domain is predominantly found in the prokaryotic protein quinohemoprotein amine dehydrogenase, adopting an immunoglobulin-like beta-sandwich fold, with seven strands arranged into two beta sheets; the fold is possibly related to the immunoglobulin and/or fibronectin type III superfamilies. The precise function of this domain has not, as yet, been defined []. ; PDB: 1JMZ_A 1JMX_A 1PBY_A 1JJU_A.
Probab=54.65 E-value=17 Score=33.96 Aligned_cols=27 Identities=30% Similarity=0.646 Sum_probs=25.1
Q ss_pred CCeeeEecceEEecCCeeEEEEEeecC
Q 002028 679 SPELISVSPLAVVGGQELSFKLRGRNL 705 (978)
Q Consensus 679 sP~I~~V~PiAv~ag~~~~f~v~G~NL 705 (978)
.|+|..|+|-.+.+|.++++.+-|.||
T Consensus 1 ~p~i~aV~P~~lkaG~~t~vti~Gt~L 27 (81)
T PF09099_consen 1 APTILAVSPAGLKAGEETTVTIVGTGL 27 (81)
T ss_dssp SSEEEEEESSEEETTCEEEEEEEEES-
T ss_pred CCeEEEECchhccCCCeEEEEEEecCc
Confidence 489999999999999999999999999
No 104
>smart00429 IPT ig-like, plexins, transcription factors.
Probab=51.93 E-value=21 Score=31.97 Aligned_cols=39 Identities=21% Similarity=0.245 Sum_probs=32.1
Q ss_pred CeeeEecceEEecCCeeEEEEEeecCCCCCceEEEeecCc
Q 002028 680 PELISVSPLAVVGGQELSFKLRGRNLTNLGTKIHCTFMGG 719 (978)
Q Consensus 680 P~I~~V~PiAv~ag~~~~f~v~G~NL~~p~tRLLcs~~Gk 719 (978)
|+|..+.|..-....-+.+.|+|.||.. ...+.|.+...
T Consensus 2 P~I~~i~P~~g~~~GGt~iti~G~nf~~-~~~~~~~~~~~ 40 (90)
T smart00429 2 PVITRISPTSGPVSGGTEITLCGKNLDS-ISVVFVEVGVG 40 (90)
T ss_pred CEEEEEccCcCcCCCCeEEEEeeecCCc-ceEEEEEEEeC
Confidence 8999999988887666699999999986 77777777653
No 105
>KOG0705 consensus GTPase-activating protein Centaurin gamma (contains Ras-like GTPase, PH and ankyrin repeat domains) [Signal transduction mechanisms]
Probab=50.75 E-value=15 Score=44.79 Aligned_cols=55 Identities=27% Similarity=0.174 Sum_probs=38.8
Q ss_pred hHHHHHHHcCChhHHHHHHhhcccCCCCCCCccccCCCCCCCCCCchhhhhcccCChhHHHHHh
Q 002028 891 QLLNRAVKMKCRRMVDLLIHYSLTSSNDTPQKYIFPPNLAGPGGITPLHLAACTSDSDDIIDAL 954 (978)
Q Consensus 891 ~LLH~AV~~~s~~mVelLL~~~~~~~~~~~~~y~F~pd~~GpsGlTPLHIAAs~~g~~~vldaL 954 (978)
.=|-+||.......+-+||+..... ...-....+.|-|+|||||.+ |+.-+..+|
T Consensus 626 qqLl~A~~~~Dl~t~~lLLAhg~~~--------e~~~t~~~~~grt~LHLa~~~-gnVvl~QLL 680 (749)
T KOG0705|consen 626 QQLLRAVAAEDLQTAILLLAHGSRE--------EVNETCGEGDGRTALHLAARK-GNVVLAQLL 680 (749)
T ss_pred HHHHHHHHHHHHHHHHHHHhccCch--------hhhccccCCCCcchhhhhhhh-cchhHHHHH
Confidence 3456899999999999999765310 111113357789999999999 877776666
No 106
>KOG4369 consensus RTK signaling protein MASK/UNC-44 [Signal transduction mechanisms]
Probab=49.88 E-value=13 Score=48.46 Aligned_cols=54 Identities=22% Similarity=0.220 Sum_probs=41.5
Q ss_pred chHHHHHHHcCChhHHHHHHhhcccCCCCCCCccccCCCCCCCCCCchhhhhcccCChhHHHHHhhc
Q 002028 890 IQLLNRAVKMKCRRMVDLLIHYSLTSSNDTPQKYIFPPNLAGPGGITPLHLAACTSDSDDIIDALTN 956 (978)
Q Consensus 890 ~~LLH~AV~~~s~~mVelLL~~~~~~~~~~~~~y~F~pd~~GpsGlTPLHIAAs~~g~~~vldaLt~ 956 (978)
-+.|-.|++.+++++|++||--.. .-...++.|.|||-|||.. |...|++.|+.
T Consensus 758 ~t~LT~acaggh~e~vellv~rga------------niehrdkkgf~plImaata-gh~tvV~~llk 811 (2131)
T KOG4369|consen 758 KTNLTSACAGGHREEVELLVVRGA------------NIEHRDKKGFVPLIMAATA-GHITVVQDLLK 811 (2131)
T ss_pred cccccccccCccHHHHHHHHHhcc------------cccccccccchhhhhhccc-CchHHHHHHHh
Confidence 388999999999999999995421 0124578888888888877 77778877755
No 107
>KOG0783 consensus Uncharacterized conserved protein, contains ankyrin and BTB/POZ domains [Function unknown]
Probab=49.52 E-value=8.6 Score=48.53 Aligned_cols=54 Identities=22% Similarity=0.233 Sum_probs=39.1
Q ss_pred hchHHHHHHHcCChhHHHHHHhhcccCCCCCCCccccCCCCCCCCCCchhhhhcccCChhHHHHHh
Q 002028 889 EIQLLNRAVKMKCRRMVDLLIHYSLTSSNDTPQKYIFPPNLAGPGGITPLHLAACTSDSDDIIDAL 954 (978)
Q Consensus 889 e~~LLH~AV~~~s~~mVelLL~~~~~~~~~~~~~y~F~pd~~GpsGlTPLHIAAs~~g~~~vldaL 954 (978)
|-+.||.||+-+...+++-||.... |+|--| -.+||||||=|--. |+.|-+.+|
T Consensus 52 GR~alH~~~S~~k~~~l~wLlqhGi---------dv~vqD--~ESG~taLHRaiyy-G~idca~lL 105 (1267)
T KOG0783|consen 52 GRTALHIAVSENKNSFLRWLLQHGI---------DVFVQD--EESGYTALHRAIYY-GNIDCASLL 105 (1267)
T ss_pred ccceeeeeeccchhHHHHHHHhcCc---------eeeecc--ccccchHhhHhhhh-chHHHHHHH
Confidence 5588888888888888888886642 233332 37888888888777 777766666
No 108
>cd01179 IPT_plexin_repeat2 Second repeat of the IPT domain of Plexins and Cell Surface Receptors (PCSR) . Plexins are involved in the regulation of cell proliferation and of cellular adhesion and repulsion receptors. In general, there are three copies of the IPT domain present preceeded by SEMA (semaphorin) and PSI (plexin, semaphorin, integrin) domains.
Probab=48.60 E-value=27 Score=31.77 Aligned_cols=39 Identities=21% Similarity=0.305 Sum_probs=34.1
Q ss_pred CeeeEecceEEecCCeeEEEEEeecCCCCCceEEEeecCc
Q 002028 680 PELISVSPLAVVGGQELSFKLRGRNLTNLGTKIHCTFMGG 719 (978)
Q Consensus 680 P~I~~V~PiAv~ag~~~~f~v~G~NL~~p~tRLLcs~~Gk 719 (978)
|.|.++.|..-....-+.+.++|.||... .++.|.+.|.
T Consensus 1 P~I~~i~P~~Gp~~GGT~vtI~G~~~~~~-~~~~V~ig~~ 39 (85)
T cd01179 1 PSITSLSPSYGPQSGGTRLTITGKHLNAG-SSVRVTVGGQ 39 (85)
T ss_pred CeeeEEcCCCCCCCCCEEEEEEEECCCCC-CeEEEEECCe
Confidence 78999999999999999999999999764 5588888886
No 109
>KOG0522 consensus Ankyrin repeat protein [General function prediction only]
Probab=46.31 E-value=16 Score=44.26 Aligned_cols=54 Identities=22% Similarity=0.179 Sum_probs=35.0
Q ss_pred hHHHHHHHcCChhHHHHHHhhcccCCCCCCCccccCCCCCCCCCCchhhhhcccCChhHHHHHh
Q 002028 891 QLLNRAVKMKCRRMVDLLIHYSLTSSNDTPQKYIFPPNLAGPGGITPLHLAACTSDSDDIIDAL 954 (978)
Q Consensus 891 ~LLH~AV~~~s~~mVelLL~~~~~~~~~~~~~y~F~pd~~GpsGlTPLHIAAs~~g~~~vldaL 954 (978)
.||||||-..+.+-.+.++.... .--.|..++-|-||||||+.+-+-+.+--+|
T Consensus 22 ~~lh~~~~~~~~~sl~~el~~~~----------~~~id~~D~~g~TpLhlAV~Lg~~~~a~~Ll 75 (560)
T KOG0522|consen 22 KPLHWAVVTTDSDSLEQELLAKV----------SLVIDRRDPPGRTPLHLAVRLGHVEAARILL 75 (560)
T ss_pred cccchhhhccchhhHHHHHhhhh----------hceeccccCCCCccHHHHHHhcCHHHHHHHH
Confidence 56999998877654444433321 1124566788899999999996554444444
No 110
>KOG3676 consensus Ca2+-permeable cation channel OSM-9 and related channels (OTRPC family) [Inorganic ion transport and metabolism; Signal transduction mechanisms]
Probab=42.42 E-value=49 Score=41.86 Aligned_cols=85 Identities=19% Similarity=0.210 Sum_probs=62.4
Q ss_pred HHHHHhccchHHHHHHHHHHHHhccccCCCccHHHHHHhhhchHHHHHHHcCChhHHHHHHhhcccCCCCCCCccccCCC
Q 002028 849 LLVFSVDRGCCALVKAILDILVEGNLSMDGLSRESLEMLWEIQLLNRAVKMKCRRMVDLLIHYSLTSSNDTPQKYIFPPN 928 (978)
Q Consensus 849 LL~FAverdWcAVvkkLLdiL~~g~v~~~~~s~~~~~~l~e~~LLH~AV~~~s~~mVelLL~~~~~~~~~~~~~y~F~pd 928 (978)
=|.||-+-+=..+++.||. -+-+.+...+ .|-|-||.-|---..+|-.++|.+.- + =...
T Consensus 243 PLSfAAC~nq~eivrlLl~----~gAd~~aqDS------~GNTVLH~lVi~~~~~My~~~L~~ga-------~---~l~~ 302 (782)
T KOG3676|consen 243 PLSFAACTNQPEIVRLLLA----HGADPNAQDS------NGNTVLHMLVIHFVTEMYDLALELGA-------N---ALEH 302 (782)
T ss_pred chHHHHHcCCHHHHHHHHh----cCCCCCcccc------CCChHHHHHHHHHHHHHHHHHHhcCC-------C---cccc
Confidence 3788888888888888888 2222222221 36688898888888999999998752 1 1234
Q ss_pred CCCCCCCchhhhhcccCChhHHHHHh
Q 002028 929 LAGPGGITPLHLAACTSDSDDIIDAL 954 (978)
Q Consensus 929 ~~GpsGlTPLHIAAs~~g~~~vldaL 954 (978)
++---|+|||-+||-+ |.-+|++-+
T Consensus 303 v~N~qgLTPLtLAakl-Gk~emf~~i 327 (782)
T KOG3676|consen 303 VRNNQGLTPLTLAAKL-GKKEMFQHI 327 (782)
T ss_pred ccccCCCChHHHHHHh-hhHHHHHHH
Confidence 6688999999999999 877777766
No 111
>KOG0521 consensus Putative GTPase activating proteins (GAPs) [Signal transduction mechanisms]
Probab=41.35 E-value=18 Score=45.86 Aligned_cols=65 Identities=29% Similarity=0.388 Sum_probs=43.1
Q ss_pred hchHHHHHHHcCChhHHHHHHhhcccCC----CC-CC-----------Ccccc-----CCCCCCCCCCchhhhhcccCCh
Q 002028 889 EIQLLNRAVKMKCRRMVDLLIHYSLTSS----ND-TP-----------QKYIF-----PPNLAGPGGITPLHLAACTSDS 947 (978)
Q Consensus 889 e~~LLH~AV~~~s~~mVelLL~~~~~~~----~~-~~-----------~~y~F-----~pd~~GpsGlTPLHIAAs~~g~ 947 (978)
+-++||+||.++..-++|+||.+..+.. .| .+ ....+ +|++..+.|.+||+||... ..
T Consensus 656 ~~s~lh~a~~~~~~~~~e~ll~~ga~vn~~d~~g~~plh~~~~~g~~~~~~~ll~~~a~~~a~~~~~~~~l~~a~~~-~~ 734 (785)
T KOG0521|consen 656 GCSLLHVAVGTGDSGAVELLLQNGADVNALDSKGRTPLHHATASGHTSIACLLLKRGADPNAFDPDGKLPLDIAMEA-AN 734 (785)
T ss_pred ccchhhhhhccchHHHHHHHHhcCCcchhhhccCCCcchhhhhhcccchhhhhccccccccccCccCcchhhHHhhh-cc
Confidence 5699999999999999999999875210 11 00 01111 2456689999999999766 44
Q ss_pred hHHHHHh
Q 002028 948 DDIIDAL 954 (978)
Q Consensus 948 ~~vldaL 954 (978)
.|++-+|
T Consensus 735 ~d~~~l~ 741 (785)
T KOG0521|consen 735 ADIVLLL 741 (785)
T ss_pred ccHHHHH
Confidence 4444333
No 112
>KOG0515 consensus p53-interacting protein 53BP/ASPP, contains ankyrin and SH3 domains [Cell cycle control, cell division, chromosome partitioning]
Probab=36.29 E-value=39 Score=41.20 Aligned_cols=47 Identities=30% Similarity=0.432 Sum_probs=34.2
Q ss_pred HHHHcCChhHHHHHHhhcccCCCCCCCccccCCCCCCCCCCchhhhhcccCChhHHHHHh
Q 002028 895 RAVKMKCRRMVDLLIHYSLTSSNDTPQKYIFPPNLAGPGGITPLHLAACTSDSDDIIDAL 954 (978)
Q Consensus 895 ~AV~~~s~~mVelLL~~~~~~~~~~~~~y~F~pd~~GpsGlTPLHIAAs~~g~~~vldaL 954 (978)
=|.--|-.++|+-.+ |. .-||.-+-.-|||+||-|.|. |.-.||+-|
T Consensus 556 DaaLeGEldlVq~~i-~e-----------v~DpSqpNdEGITaLHNAiCa-ghyeIVkFL 602 (752)
T KOG0515|consen 556 DAALEGELDLVQRII-YE-----------VTDPSQPNDEGITALHNAICA-GHYEIVKFL 602 (752)
T ss_pred hhhhcchHHHHHHHH-Hh-----------hcCCCCCCccchhHHhhhhhc-chhHHHHHH
Confidence 344444556666666 44 334656677899999999999 989999999
No 113
>KOG0506 consensus Glutaminase (contains ankyrin repeat) [Amino acid transport and metabolism]
Probab=32.13 E-value=30 Score=41.71 Aligned_cols=55 Identities=20% Similarity=0.218 Sum_probs=46.0
Q ss_pred chHHHHHHHcCChhHHHHHHhhcccCCCCCCCccccCCCCCCCCCCchhhhhcccCChhHHHHHhhc
Q 002028 890 IQLLNRAVKMKCRRMVDLLIHYSLTSSNDTPQKYIFPPNLAGPGGITPLHLAACTSDSDDIIDALTN 956 (978)
Q Consensus 890 ~~LLH~AV~~~s~~mVelLL~~~~~~~~~~~~~y~F~pd~~GpsGlTPLHIAAs~~g~~~vldaLt~ 956 (978)
-|.||.|+.-|+.++|++||.-. .-+||.-+.=|-|||-=|--. ...+|+.+|.+
T Consensus 540 RTaLHvAAaEG~v~v~kfl~~~~-----------kv~~~~kDRw~rtPlDdA~~F-~h~~v~k~L~~ 594 (622)
T KOG0506|consen 540 RTALHVAAAEGHVEVVKFLLNAC-----------KVDPDPKDRWGRTPLDDAKHF-KHKEVVKLLEE 594 (622)
T ss_pred chhheeecccCceeHHHHHHHHH-----------cCCCChhhccCCCcchHhHhc-CcHHHHHHHHH
Confidence 49999999999999999999732 356888899999999888776 67788888833
No 114
>cd02849 CGTase_C_term Cgtase (cyclodextrin glycosyltransferase) C-terminus domain. Enzymes such as amylases, cyclomaltodextrinase (CDase), and CGTase degrade starch to smaller oligosaccharides by hydrolyzing the alpha-D-(1,4) linkages between glucose residues present in starch. In the case of CGTases, an additional cyclization reaction is catalyzed yielding mixtures of cyclic oligosaccharides which are referred to as alpha-, beta-, or gamma-cyclodextrins (CDs) (consisting of six, seven, or eight glucoses, respectively). CGTases are characterized as depending on the major product of the cyclization reaction. Besides having similar catalytic site residues, amylases and CGTases contain carbohydrate binding domains that are distant from the active site and which are implicated in attaching the enzyme to raw starch granules and in guiding the amylose chain into the active site. The C-terminus of CGTase may be related to the immunoglobulin and/or fibronectin type III superfamilies. These d
Probab=32.08 E-value=1.7e+02 Score=27.10 Aligned_cols=78 Identities=15% Similarity=0.227 Sum_probs=45.9
Q ss_pred CCeeeEecceEEecCCeeEEEEEeecCCCCCceEEEeecCcccceeeccccCCCCcccceeEEeeeecCCCCCCccceEE
Q 002028 679 SPELISVSPLAVVGGQELSFKLRGRNLTNLGTKIHCTFMGGYASQEVTSSTCQGSIYDEIILAGLKIQDTSPSVLGRFFI 758 (978)
Q Consensus 679 sP~I~~V~PiAv~ag~~~~f~v~G~NL~~p~tRLLcs~~GkYL~~E~~~~~~~g~~~de~~~~~f~v~~s~P~~~Gr~FI 758 (978)
.|.|..|.|.....|.. +.+.|.++.....++ .|.+... ++.. +... ...+.+|. .+.-.+..+|
T Consensus 2 ~P~I~~i~P~~g~~G~~--VtI~G~gFg~~~~~V--~~g~~~a--~v~s--~sdt------~I~~~vP~-~~aG~~~V~V 66 (81)
T cd02849 2 TPLIGHVGPMMGKAGNT--VTISGEGFGSAPGTV--YFGTTAA--TVIS--WSDT------RIVVTVPN-VPAGNYDVTV 66 (81)
T ss_pred CCEEeeEcCCCCCCCCE--EEEEEECCCCCCcEE--EECCEEe--EEEE--ECCC------EEEEEeCC-CCCceEEEEE
Confidence 58999999999888875 467777777544444 6665333 2221 1111 12345563 2233445555
Q ss_pred EEecCCCCCCccE
Q 002028 759 EVENGFKGNSFPV 771 (978)
Q Consensus 759 EVEnG~~SnffPv 771 (978)
+..+|-.||.+.|
T Consensus 67 ~~~~G~~Sn~~~f 79 (81)
T cd02849 67 KTADGATSNGYNF 79 (81)
T ss_pred EeCCCcccCcEee
Confidence 5557877887765
No 115
>KOG4369 consensus RTK signaling protein MASK/UNC-44 [Signal transduction mechanisms]
Probab=30.74 E-value=45 Score=43.92 Aligned_cols=85 Identities=16% Similarity=0.205 Sum_probs=55.7
Q ss_pred HHHHhccchHHHHHHHHHHHHhccccCCCccHHHHHHhhhchHHHHHHHcCChhHHHHHHhhcccCCCCCCCccccCCCC
Q 002028 850 LVFSVDRGCCALVKAILDILVEGNLSMDGLSRESLEMLWEIQLLNRAVKMKCRRMVDLLIHYSLTSSNDTPQKYIFPPNL 929 (978)
Q Consensus 850 L~FAverdWcAVvkkLLdiL~~g~v~~~~~s~~~~~~l~e~~LLH~AV~~~s~~mVelLL~~~~~~~~~~~~~y~F~pd~ 929 (978)
|..+|--|-.-||..||..+.. ++| .-++..+||..|..-+..++|.+||..... .---+
T Consensus 828 lSlacsggr~~vvelLl~~gan-----keh-----rnvsDytPlsla~Sggy~~iI~~llS~Gse----------InSrt 887 (2131)
T KOG4369|consen 828 LSLACSGGRTRVVELLLNAGAN-----KEH-----RNVSDYTPLSLARSGGYTKIIHALLSSGSE----------INSRT 887 (2131)
T ss_pred EEEecCCCcchHHHHHHHhhcc-----ccc-----cchhhcCchhhhcCcchHHHHHHHhhcccc----------ccccc
Confidence 3445555667788888887755 333 113478999999999999999999976521 00112
Q ss_pred CCCCCCchhhhhcccCChhHHHHHh
Q 002028 930 AGPGGITPLHLAACTSDSDDIIDAL 954 (978)
Q Consensus 930 ~GpsGlTPLHIAAs~~g~~~vldaL 954 (978)
.---|+.||++|+..---..++-+|
T Consensus 888 gSklgisPLmlatmngh~~at~~ll 912 (2131)
T KOG4369|consen 888 GSKLGISPLMLATMNGHQAATLSLL 912 (2131)
T ss_pred ccccCcchhhhhhhccccHHHHHHh
Confidence 2356899999998874333344333
No 116
>cd01181 IPT_plexin_repeat3 Third repeat of the IPT domain of Plexins and Cell Surface Receptors (PCSR) . Plexins are involved in the regulation of cell proliferation and of cellular adhesion and repulsion receptors. In general, there are three copies of the IPT domain present preceeded by SEMA (semaphorin) and PSI (plexin, semaphorin, integrin) domains.
Probab=29.97 E-value=83 Score=29.92 Aligned_cols=41 Identities=17% Similarity=0.285 Sum_probs=34.4
Q ss_pred CeeeEecceEEecCCeeEEEEEeecCCCCC-ceEEEeecCcc
Q 002028 680 PELISVSPLAVVGGQELSFKLRGRNLTNLG-TKIHCTFMGGY 720 (978)
Q Consensus 680 P~I~~V~PiAv~ag~~~~f~v~G~NL~~p~-tRLLcs~~GkY 720 (978)
|.|..|+|..=..+.-+.+.|.|.||+.=. -++-+.++|.+
T Consensus 1 P~I~~i~P~~g~~SGGt~itV~G~~Lds~q~p~~~V~~~~~~ 42 (99)
T cd01181 1 PTITRIEPEWSFLSGGTPITVTGTNLNTVQEPRIRVKYGGVE 42 (99)
T ss_pred CEEEEeccCCCccCCCEEEEEEeeccCcccccEEEEEECCce
Confidence 789999999888888899999999999844 37777788853
No 117
>PF14901 Jiv90: Cleavage inducing molecular chaperone
Probab=29.31 E-value=25 Score=33.94 Aligned_cols=19 Identities=42% Similarity=0.753 Sum_probs=15.4
Q ss_pred cchHhhhhccCCCCCCccc
Q 002028 210 MQRFCQQCSRFHPLSEFDE 228 (978)
Q Consensus 210 ~~RFCQQCsrFH~L~eFd~ 228 (978)
.-|+||+|..+|+-.+=|.
T Consensus 26 ~AR~C~~C~~~H~Ak~gDi 44 (94)
T PF14901_consen 26 AARYCQDCKIRHPAKEGDI 44 (94)
T ss_pred hhHhHHHhhhhcccccCCe
Confidence 5699999999998766543
No 118
>KOG0521 consensus Putative GTPase activating proteins (GAPs) [Signal transduction mechanisms]
Probab=28.78 E-value=45 Score=42.42 Aligned_cols=59 Identities=20% Similarity=0.135 Sum_probs=45.9
Q ss_pred HHHHHHHHHHHhccchHHHHHHHHHHHHhccccCCCccHHHHHHhhhchHHHHHHHcCChhHHHHHHhh
Q 002028 843 LSRFKFLLVFSVDRGCCALVKAILDILVEGNLSMDGLSRESLEMLWEIQLLNRAVKMKCRRMVDLLIHY 911 (978)
Q Consensus 843 ~~RFk~LL~FAverdWcAVvkkLLdiL~~g~v~~~~~s~~~~~~l~e~~LLH~AV~~~s~~mVelLL~~ 911 (978)
+..-+.+|--||..+|..+...||+-... ++ .+.. .+-++||-++.+++...+-+|+.-
T Consensus 653 ~~~~~s~lh~a~~~~~~~~~e~ll~~ga~--vn-------~~d~-~g~~plh~~~~~g~~~~~~~ll~~ 711 (785)
T KOG0521|consen 653 LCIGCSLLHVAVGTGDSGAVELLLQNGAD--VN-------ALDS-KGRTPLHHATASGHTSIACLLLKR 711 (785)
T ss_pred hhcccchhhhhhccchHHHHHHHHhcCCc--ch-------hhhc-cCCCcchhhhhhcccchhhhhccc
Confidence 33456889999999999999999886644 22 1222 356999999999999999999973
No 119
>KOG0783 consensus Uncharacterized conserved protein, contains ankyrin and BTB/POZ domains [Function unknown]
Probab=28.07 E-value=56 Score=41.87 Aligned_cols=44 Identities=18% Similarity=0.233 Sum_probs=32.5
Q ss_pred hhchHHHHHHHcCChhHHHHHHhhcccCCCCCCCccccCCCCCCCCCCchhhhhcc
Q 002028 888 WEIQLLNRAVKMKCRRMVDLLIHYSLTSSNDTPQKYIFPPNLAGPGGITPLHLAAC 943 (978)
Q Consensus 888 ~e~~LLH~AV~~~s~~mVelLL~~~~~~~~~~~~~y~F~pd~~GpsGlTPLHIAAs 943 (978)
+|.|+||||...|+.+-|-+||.|.. . --+-|..|+.||.+-.-
T Consensus 85 SG~taLHRaiyyG~idca~lLL~~g~-------S-----L~i~Dkeglsplq~~~r 128 (1267)
T KOG0783|consen 85 SGYTALHRAIYYGNIDCASLLLSKGR-------S-----LRIKDKEGLSPLQFLSR 128 (1267)
T ss_pred ccchHhhHhhhhchHHHHHHHHhcCC-------c-----eEEecccCCCHHHHHhh
Confidence 58999999999999999999999863 1 11235556666665444
No 120
>PRK07217 replication factor A; Reviewed
Probab=27.61 E-value=36 Score=38.96 Aligned_cols=69 Identities=17% Similarity=0.281 Sum_probs=42.1
Q ss_pred CCCCcccccCCCcccccccCCCCCCCCC-CCCcccccCCCCCCCCCCCcccCCChhhhccCccccccccccccccCcc
Q 002028 126 EDDGRLDLNLGGGLTAVDVEQPEPPVVT-SKPNKRVRSGSPGTAPYPMCQVDNCKEDLSNAKDYHRRHKVCELHSKST 202 (978)
Q Consensus 126 ~~~~~l~l~lgg~~~~~~~~~~~~~~~~-~~~~kr~r~~~~~~~~~~~CqV~gC~~dL~~~k~Y~rRhrvCe~H~kA~ 202 (978)
+-.++++||+|..+......+..+.... .......=.-++|++-..+|-.+||+.-|+. -.|+.|=+..
T Consensus 143 ey~G~~~lnlg~~t~I~~~de~IeV~~~~vei~G~lVdi~~GsglI~rCP~~~C~Rvl~~--------g~C~~HG~ve 212 (311)
T PRK07217 143 EYQGRFSVKLNRTTSIEELDEDIEVGDDEVEVEGALVDIQSGSGLIKRCPEEDCTRVLQN--------GRCSEHGKVE 212 (311)
T ss_pred eECCEEEEEeCCceEEEeCCCCccccCccccceeEEEEEeCCCCCeecCCccccCccccC--------CCCCCCCCcC
Confidence 4558899999987765543332211111 1111111123455677889999999999964 4799998765
No 121
>cd00604 IPT_CGTD IPT domain (domain D) of cyclodextrin glycosyltransferase (CGTase) and similar enzymes. These enzymes are involved in the enzymatic hydrolysis of alpha-1,4 linkages of starch polymers and belong to the glycosyl hydrolase family 13. Most consist of three domains (A,B,C) but CGTase is more complex and has two additional domains (D,E). The function of the IPT/D domain is unknown.
Probab=26.57 E-value=3.5e+02 Score=25.04 Aligned_cols=77 Identities=23% Similarity=0.369 Sum_probs=46.7
Q ss_pred CeeeEecceEEecCCeeEEEEEeecCCCCCceEEEeecCcccceeeccccCCCCcccceeEEeeeecCCCCCCccceEEE
Q 002028 680 PELISVSPLAVVGGQELSFKLRGRNLTNLGTKIHCTFMGGYASQEVTSSTCQGSIYDEIILAGLKIQDTSPSVLGRFFIE 759 (978)
Q Consensus 680 P~I~~V~PiAv~ag~~~~f~v~G~NL~~p~tRLLcs~~GkYL~~E~~~~~~~g~~~de~~~~~f~v~~s~P~~~Gr~FIE 759 (978)
|.|..|.|....+|..+ .+.|.++.....++ .|+|.- +++..- . | ....|.+|.. ..|-..|-
T Consensus 1 P~I~~i~P~~g~pG~~V--tI~G~gFg~~~~~V--~~g~~~--a~v~s~--s----d--t~I~~~VP~~---~~g~~~i~ 63 (81)
T cd00604 1 PLIGSVGPVMGKPGNTV--TISGEGFGSTGGTV--YFGGTA--AEVLSW--S----D--TSIVVEVPRV---APGNYNIS 63 (81)
T ss_pred CeEeeEcCCCCCCCCEE--EEEEECCCCCccEE--EECCEE--EEEEEE--C----C--CEEEEEeCCC---CCCceEEE
Confidence 78899999998888876 66677776644444 566633 233321 0 1 1234566743 45555555
Q ss_pred Ee--cCCCCCCccEEe
Q 002028 760 VE--NGFKGNSFPVII 773 (978)
Q Consensus 760 VE--nG~~SnffPvIV 773 (978)
|. +|-.||.++|=|
T Consensus 64 V~~~~G~~Sn~~~f~~ 79 (81)
T cd00604 64 VTTVDGVTSNGYNFEV 79 (81)
T ss_pred EEECCCcccCcEeEEE
Confidence 55 788888887643
No 122
>PF05587 Anth_Ig: Anthrax receptor extracellular domain; InterPro: IPR008400 Anthrax is an acute disease in humans and animals caused by the bacterium Bacillus anthracis, which can be lethal. There are effective vaccines against anthrax, and some forms of the disease respond well to antibiotic treatment. The anthrax bacillus is one of only a few that can form long-lived spores. The anthrax toxin consists of the proteins protective antigen (PA) lethal factor (LF) and oedema factor (EF). The first step of toxin entry into host cells is the recognition by PA of a receptor on the surface of the target cell. The subsequent cleavage of receptor-bound PA enables EF and LF to bind and form a heptameric PA63 pre-pore, which triggers endocytosis. PA has been shown to bind to two cellular receptors: anthrax toxin receptor/tumour endothelial marker 8 and capillary morphogenesis protein 2 (CMG2), which are closely related host cell receptors. Both bind to PA with high affinity and are capable of mediating toxicity [, ], and both are type 1 membrane proteins that include an approximately 200-aa extracellular von Willebrand factor A (VWA) domain with a metal ion-dependent adhesion site (MIDAS) motif []. This region is found in the putatively extracellular N-terminal half of the anthrax receptor. It is probably part of the Ig superfamily and most closely related to IPR002909 from INTERPRO.; GO: 0004872 receptor activity, 0016021 integral to membrane; PDB: 3N2N_E 1SHT_X 1TZN_o 1SHU_X.
Probab=26.46 E-value=22 Score=34.91 Aligned_cols=37 Identities=30% Similarity=0.531 Sum_probs=0.0
Q ss_pred eeeEecceEEecCCeeEEEEEee--cCCCCCceEEEeec
Q 002028 681 ELISVSPLAVVGGQELSFKLRGR--NLTNLGTKIHCTFM 717 (978)
Q Consensus 681 ~I~~V~PiAv~ag~~~~f~v~G~--NL~~p~tRLLcs~~ 717 (978)
+|+.|.|--|=+|++.+++|+|+ +.+.....++|+|.
T Consensus 7 Eil~~ePSsvC~ge~f~Vvv~G~GF~~~~~~d~ViC~F~ 45 (105)
T PF05587_consen 7 EILSVEPSSVCVGESFQVVVRGNGFNNARNVDQVICRFK 45 (105)
T ss_dssp ---------------------------------------
T ss_pred eEEEEcCCceECCCceEEEEECccccccCCCCeEEEEEE
Confidence 89999999999999999999986 55567778999984
No 123
>KOG0818 consensus GTPase-activating proteins of the GIT family [Signal transduction mechanisms]
Probab=24.69 E-value=90 Score=38.06 Aligned_cols=52 Identities=25% Similarity=0.316 Sum_probs=37.3
Q ss_pred hHHHHHHHcCChhHHHHHHhhcccCCCCCCCccccCCCCCCCCCCchhhhhcccCChhHHHHHh
Q 002028 891 QLLNRAVKMKCRRMVDLLIHYSLTSSNDTPQKYIFPPNLAGPGGITPLHLAACTSDSDDIIDAL 954 (978)
Q Consensus 891 ~LLH~AV~~~s~~mVelLL~~~~~~~~~~~~~y~F~pd~~GpsGlTPLHIAAs~~g~~~vldaL 954 (978)
-=||-.||.+..+.-=-||... +...| |.|+. |-||||+||-. |...-+++|
T Consensus 135 rQLhasvRt~nlet~LRll~lG------A~~N~-~hpek----g~TpLHvAAk~-Gq~~Q~ElL 186 (669)
T KOG0818|consen 135 KQLHSSVRTGNLETCLRLLSLG------AQANF-FHPEK----GNTPLHVAAKA-GQILQAELL 186 (669)
T ss_pred HHHHHHhhcccHHHHHHHHHcc------cccCC-CCccc----CCchhHHHHhc-cchhhhhHH
Confidence 3589999999988766666553 23333 66754 88999999988 665566666
No 124
>PRK00241 nudC NADH pyrophosphatase; Reviewed
Probab=24.65 E-value=25 Score=38.61 Aligned_cols=37 Identities=14% Similarity=0.378 Sum_probs=27.9
Q ss_pred CccccccccccccccCcceeeeCCccchHhhhhccCCC
Q 002028 185 AKDYHRRHKVCELHSKSTKALVGKQMQRFCQQCSRFHP 222 (978)
Q Consensus 185 ~k~Y~rRhrvCe~H~kA~~v~v~G~~~RFCQQCsrFH~ 222 (978)
+-.+|++||-|..+-....+. .+...|.|..|++.|-
T Consensus 92 l~~w~~~~~fC~~CG~~~~~~-~~~~~~~C~~c~~~~y 128 (256)
T PRK00241 92 LAEFYRSHRFCGYCGHPMHPS-KTEWAMLCPHCRERYY 128 (256)
T ss_pred HHHHhhcCccccccCCCCeec-CCceeEECCCCCCEEC
Confidence 347999999998777665554 4556689999997763
No 125
>COG2816 NPY1 NTP pyrophosphohydrolases containing a Zn-finger, probably nucleic-acid-binding [DNA replication, recombination, and repair]
Probab=22.53 E-value=30 Score=39.01 Aligned_cols=34 Identities=21% Similarity=0.506 Sum_probs=28.3
Q ss_pred cccccccccccccCcceeeeCCccchHhhhhccCC
Q 002028 187 DYHRRHKVCELHSKSTKALVGKQMQRFCQQCSRFH 221 (978)
Q Consensus 187 ~Y~rRhrvCe~H~kA~~v~v~G~~~RFCQQCsrFH 221 (978)
.+|++||.|. ++-++.....|...|-|++|+.-|
T Consensus 106 ~w~~~~RFCg-~CG~~~~~~~~g~~~~C~~cg~~~ 139 (279)
T COG2816 106 EWYRSHRFCG-RCGTKTYPREGGWARVCPKCGHEH 139 (279)
T ss_pred HHHhhCcCCC-CCCCcCccccCceeeeCCCCCCcc
Confidence 6899999995 566777777888889999999765
No 126
>KOG3609 consensus Receptor-activated Ca2+-permeable cation channels (STRPC family) [Inorganic ion transport and metabolism; Signal transduction mechanisms]
Probab=22.46 E-value=53 Score=41.78 Aligned_cols=62 Identities=18% Similarity=0.132 Sum_probs=50.5
Q ss_pred hHHHHHHHcCChhHHHHHHhhcccCCCCCCCccccCCCCCCCCCCchhhhhcccCChhHHHHHhhcCcchh
Q 002028 891 QLLNRAVKMKCRRMVDLLIHYSLTSSNDTPQKYIFPPNLAGPGGITPLHLAACTSDSDDIIDALTNDPQEV 961 (978)
Q Consensus 891 ~LLH~AV~~~s~~mVelLL~~~~~~~~~~~~~y~F~pd~~GpsGlTPLHIAAs~~g~~~vldaLt~DP~~v 961 (978)
----.|+-+|..++|+-.|.+. +.+.+-.+-.||-|.+.||||-.. .+-+++++|.+-|-.+
T Consensus 27 ~~fL~a~E~gd~~~V~k~l~~~--------~~~~lninc~d~lGr~al~iai~n-enle~~eLLl~~~~~~ 88 (822)
T KOG3609|consen 27 KGFLLAHENGDVPLVAKALEYK--------AVSKLNINCRDPLGRLALHIAIDN-ENLELQELLLDTSSEE 88 (822)
T ss_pred HHHHHHHHcCChHHHHHHHHhc--------cccccchhccChHhhhceeccccc-ccHHHHHHHhcCcccc
Confidence 3444689999999999999885 225677788899999999999888 7889999997766555
No 127
>cd02969 PRX_like1 Peroxiredoxin (PRX)-like 1 family; hypothetical proteins that show sequence similarity to PRXs. Members of this group contain a conserved cysteine that aligns to the first cysteine in the CXXC motif of TRX. This does not correspond to the peroxidatic cysteine found in PRXs, which aligns to the second cysteine in the CXXC motif of TRX. In addition, these proteins do not contain the other two conserved residues of the catalytic triad of PRX. PRXs confer a protective antioxidant role in cells through their peroxidase activity in which hydrogen peroxide, peroxynitrate, and organic hydroperoxides are reduced and detoxified using reducing equivalents derived from either thioredoxin, glutathione, trypanothione and AhpF.
Probab=21.52 E-value=1.3e+02 Score=30.09 Aligned_cols=47 Identities=21% Similarity=0.405 Sum_probs=34.0
Q ss_pred CccceeEEE-ecCCCCCC-----CchhhHHHHHHHhcCCCccccccccCCceE
Q 002028 566 DCTGRIIFK-LFDKDPSQ-----FPGTLRKEIYNWLSNSPSEMESYIRPGCVI 612 (978)
Q Consensus 566 ~rTgRIsFK-LFdk~P~d-----fP~~LR~QI~~WLs~~PteLEgYIRPGCvI 612 (978)
++.|||.+. -++-.... =...|++.|-.||+..+.+.|--+=+||.+
T Consensus 117 d~~G~v~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~ 169 (171)
T cd02969 117 DPDGKLVYRGRIDDSRPGNDPPVTGRDLRAALDALLAGKPVPVPQTPSIGCSI 169 (171)
T ss_pred CCCCeEEEeecccCCcccccccccHHHHHHHHHHHHcCCCCCccccCCCCccc
Confidence 567888864 11111111 125699999999999999999999999975
No 128
>PF09297 zf-NADH-PPase: NADH pyrophosphatase zinc ribbon domain; InterPro: IPR015376 This domain has a zinc ribbon structure and is often found between two NUDIX domains.; GO: 0016787 hydrolase activity, 0046872 metal ion binding; PDB: 1VK6_A 2GB5_A.
Probab=20.34 E-value=30 Score=26.55 Aligned_cols=31 Identities=23% Similarity=0.460 Sum_probs=16.1
Q ss_pred ccccccccccCcceeeeCCccchHhhhhccCC
Q 002028 190 RRHKVCELHSKSTKALVGKQMQRFCQQCSRFH 221 (978)
Q Consensus 190 rRhrvCe~H~kA~~v~v~G~~~RFCQQCsrFH 221 (978)
++||-|.. .-++++.+.+...|-|+.|+..|
T Consensus 1 ~~~rfC~~-CG~~t~~~~~g~~r~C~~Cg~~~ 31 (32)
T PF09297_consen 1 RNHRFCGR-CGAPTKPAPGGWARRCPSCGHEH 31 (32)
T ss_dssp HTTSB-TT-T--BEEE-SSSS-EEESSSS-EE
T ss_pred CCCcccCc-CCccccCCCCcCEeECCCCcCEe
Confidence 35677743 44566666666778888887543
Done!