Query 002028
Match_columns 978
No_of_seqs 199 out of 356
Neff 3.9
Searched_HMMs 29240
Date Mon Mar 25 09:18:33 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/002028.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/002028hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1ul4_A SPL4, squamosa promoter 100.0 1.4E-39 4.8E-44 296.6 -1.3 90 165-254 3-92 (94)
2 1ul5_A SPL7, squamosa promoter 100.0 1E-37 3.5E-42 281.6 -3.0 82 169-250 2-83 (88)
3 1wj0_A Squamosa promoter-bindi 99.9 4E-29 1.4E-33 212.0 1.0 59 169-227 2-60 (60)
4 1n0q_A 3ANK, 3 ankyrin repeats 98.5 3.1E-07 1.1E-11 78.6 8.2 85 849-956 5-89 (93)
5 4gpm_A Engineered protein OR26 98.5 2.9E-07 9.8E-12 89.3 8.4 85 849-956 73-157 (169)
6 3aaa_C Myotrophin, protein V-1 98.5 4.4E-07 1.5E-11 81.1 8.6 86 847-955 8-93 (123)
7 2zgd_A 3 repeat synthetic anky 98.4 7.4E-07 2.5E-11 79.1 8.0 86 846-954 24-109 (110)
8 4gpm_A Engineered protein OR26 98.4 7.6E-07 2.6E-11 86.4 8.4 84 849-955 40-123 (169)
9 1k1a_A B-cell lymphoma 3-encod 98.3 1.8E-06 6.2E-11 83.9 9.3 88 848-954 11-98 (241)
10 3deo_A Signal recognition part 98.3 1.5E-06 5E-11 83.2 8.2 86 845-954 43-129 (183)
11 3c5r_A BARD-1, BRCA1-associate 98.3 1.2E-06 4.1E-11 79.4 7.1 83 849-954 13-95 (137)
12 2jab_A H10-2-G3; HER2, darpin, 98.3 1.7E-06 5.9E-11 78.7 7.9 86 846-954 14-99 (136)
13 2jab_A H10-2-G3; HER2, darpin, 98.3 1.8E-06 6E-11 78.7 7.8 86 848-956 49-134 (136)
14 3twr_A Tankyrase-2; ankyrin re 98.2 2.2E-06 7.4E-11 79.7 8.3 84 848-954 44-127 (165)
15 3ehr_A Osteoclast-stimulating 98.2 1.8E-06 6.1E-11 84.5 7.7 85 848-954 75-159 (222)
16 1ycs_B 53BP2, P53BP2; ankyrin 98.2 1.9E-06 6.6E-11 86.0 7.7 84 848-954 39-122 (239)
17 1n0r_A 4ANK, 4 ankyrin repeats 98.2 3.5E-06 1.2E-10 73.6 8.4 83 849-954 5-87 (126)
18 2l6b_A NR1C; ankyrin, consensu 98.2 1.3E-06 4.3E-11 77.0 5.5 86 848-956 11-96 (115)
19 3f6q_A Integrin-linked protein 98.2 3.1E-06 1E-10 80.1 8.3 84 848-954 41-124 (179)
20 1d9s_A Cyclin-dependent kinase 98.2 2.5E-06 8.6E-11 77.6 7.4 84 849-956 48-132 (136)
21 1awc_B Protein (GA binding pro 98.2 3E-06 1E-10 78.2 8.0 85 848-955 36-120 (153)
22 1n0q_A 3ANK, 3 ankyrin repeats 98.2 1.5E-06 5.3E-11 74.3 5.6 54 889-955 2-55 (93)
23 3twr_A Tankyrase-2; ankyrin re 98.2 4.5E-06 1.5E-10 77.6 9.0 86 848-957 77-162 (165)
24 1awc_B Protein (GA binding pro 98.2 2.9E-06 1E-10 78.3 7.4 85 847-955 3-87 (153)
25 2vge_A RELA-associated inhibit 98.2 3.5E-06 1.2E-10 84.7 8.6 54 848-911 23-76 (229)
26 3v31_A Ankyrin repeat family A 98.2 3.9E-06 1.3E-10 78.1 8.2 84 848-954 38-121 (167)
27 3ui2_A Signal recognition part 98.2 2.9E-06 1E-10 85.5 7.9 87 845-955 44-131 (244)
28 1ihb_A P18-INK4C(INK6), cyclin 98.2 4.3E-06 1.5E-10 77.0 8.3 87 848-956 72-158 (162)
29 1d9s_A Cyclin-dependent kinase 98.1 1.2E-06 4.2E-11 79.7 4.3 84 848-955 14-98 (136)
30 2rfm_A Putative ankyrin repeat 98.1 4.5E-06 1.5E-10 79.7 8.4 84 848-954 70-153 (192)
31 1bd8_A P19INK4D CDK4/6 inhibit 98.1 4.2E-06 1.4E-10 76.9 7.7 83 849-955 39-121 (156)
32 1oy3_D Transcription factor in 98.1 4.4E-06 1.5E-10 82.9 8.5 85 848-954 160-244 (282)
33 3v30_A DNA-binding protein rfx 98.1 5.5E-06 1.9E-10 77.5 8.6 84 848-954 38-121 (172)
34 2y1l_E Darpin-8.4; hydrolase-i 98.1 5E-06 1.7E-10 78.2 8.3 84 848-954 49-132 (169)
35 3f6q_A Integrin-linked protein 98.1 5.1E-06 1.7E-10 78.6 8.3 85 849-955 8-92 (179)
36 3v31_A Ankyrin repeat family A 98.1 5E-06 1.7E-10 77.4 8.1 86 848-956 71-156 (167)
37 2dzn_A Probable 26S proteasome 98.1 4.6E-06 1.6E-10 80.6 8.1 86 848-955 109-194 (228)
38 1ihb_A P18-INK4C(INK6), cyclin 98.1 4.4E-06 1.5E-10 77.0 7.5 83 848-954 40-122 (162)
39 4b93_B Ankyrin repeat domain-c 98.1 3.1E-06 1.1E-10 87.1 7.2 82 849-955 155-236 (269)
40 4b93_B Ankyrin repeat domain-c 98.1 3.3E-06 1.1E-10 87.0 7.3 84 849-955 122-205 (269)
41 1oy3_D Transcription factor in 98.1 6.6E-06 2.3E-10 81.6 9.1 88 848-956 11-99 (282)
42 3v30_A DNA-binding protein rfx 98.1 4.5E-06 1.5E-10 78.1 7.3 86 848-956 71-156 (172)
43 1dcq_A PYK2-associated protein 98.1 5.1E-06 1.7E-10 86.3 8.5 86 848-956 171-259 (278)
44 1n0r_A 4ANK, 4 ankyrin repeats 98.1 7.8E-06 2.7E-10 71.4 8.4 86 848-956 37-122 (126)
45 3c5r_A BARD-1, BRCA1-associate 98.1 3.8E-06 1.3E-10 76.1 6.5 86 848-956 45-130 (137)
46 2etb_A Transient receptor pote 98.1 5.1E-06 1.7E-10 82.6 8.0 108 847-956 44-157 (256)
47 3jxi_A Vanilloid receptor-rela 98.1 5.3E-06 1.8E-10 82.4 8.0 94 848-954 95-204 (260)
48 3jxi_A Vanilloid receptor-rela 98.1 4.9E-06 1.7E-10 82.6 7.7 101 848-956 48-161 (260)
49 1s70_B 130 kDa myosin-binding 98.1 5.3E-06 1.8E-10 83.7 7.9 84 848-954 42-125 (299)
50 2rfa_A Transient receptor pote 98.1 9.1E-06 3.1E-10 79.2 9.4 100 848-954 39-140 (232)
51 2etb_A Transient receptor pote 98.1 4.8E-06 1.7E-10 82.7 7.5 96 848-956 92-202 (256)
52 3aaa_C Myotrophin, protein V-1 98.1 9.6E-06 3.3E-10 72.4 8.6 81 848-954 42-122 (123)
53 4hbd_A KN motif and ankyrin re 98.1 5.3E-06 1.8E-10 85.1 7.8 55 889-956 183-237 (276)
54 2y1l_E Darpin-8.4; hydrolase-i 98.1 7.8E-06 2.7E-10 76.8 8.3 86 847-955 15-100 (169)
55 1k1a_A B-cell lymphoma 3-encod 98.0 3.9E-06 1.3E-10 81.6 5.9 87 849-958 153-239 (241)
56 4hbd_A KN motif and ankyrin re 98.0 5.9E-06 2E-10 84.7 7.5 87 848-956 185-271 (276)
57 2rfm_A Putative ankyrin repeat 98.0 7E-06 2.4E-10 78.3 7.5 86 848-956 103-188 (192)
58 1ikn_D Protein (I-kappa-B-alph 98.0 1.2E-05 4.2E-10 78.9 8.9 87 848-956 119-205 (236)
59 3ljn_A Hypothetical protein; a 98.0 1.3E-05 4.5E-10 83.9 9.5 55 848-912 140-196 (364)
60 3hra_A Ankyrin repeat family p 98.0 1.1E-05 3.6E-10 76.8 7.9 53 850-911 9-61 (201)
61 3hra_A Ankyrin repeat family p 98.0 1.4E-05 4.7E-10 76.0 8.3 87 848-954 74-164 (201)
62 2vge_A RELA-associated inhibit 98.0 1.3E-05 4.3E-10 80.6 8.4 87 848-956 56-144 (229)
63 3ljn_A Hypothetical protein; a 98.0 6.7E-06 2.3E-10 86.1 6.6 90 848-956 175-265 (364)
64 2f8y_A Notch homolog 1, transl 98.0 1.5E-05 5.1E-10 77.0 8.2 84 848-954 94-177 (223)
65 2pnn_A Transient receptor pote 98.0 1.2E-05 4.2E-10 80.8 7.9 95 848-955 103-213 (273)
66 1bi7_B P16INK4A, MTS1, multipl 98.0 1.3E-05 4.3E-10 74.6 7.3 78 856-956 54-132 (156)
67 1ikn_D Protein (I-kappa-B-alph 98.0 1.1E-05 3.7E-10 79.2 7.1 90 848-956 80-172 (236)
68 3aji_A 26S proteasome non-ATPa 97.9 1.7E-05 5.8E-10 77.0 8.3 83 849-954 109-191 (231)
69 3utm_A Tankyrase-1; tankyrase, 97.9 1.5E-05 5.3E-10 81.1 8.3 85 848-955 60-144 (351)
70 1yyh_A HN1;, notch 1, ankyrin 97.9 1.2E-05 4E-10 80.4 6.9 83 849-954 127-209 (253)
71 1s70_B 130 kDa myosin-binding 97.9 1.5E-05 5.1E-10 80.4 7.8 54 889-955 199-252 (299)
72 2pnn_A Transient receptor pote 97.9 1.8E-05 6.1E-10 79.6 8.3 103 848-956 56-169 (273)
73 3kea_A K1L; tropism, ANK repea 97.9 1.4E-05 4.7E-10 82.2 7.4 82 848-954 33-114 (285)
74 1bd8_A P19INK4D CDK4/6 inhibit 97.9 1.4E-05 4.8E-10 73.4 6.7 86 847-955 3-88 (156)
75 2xai_A ASB-9, ankyrin repeat a 97.9 1.6E-05 5.5E-10 80.0 7.6 53 849-911 6-58 (261)
76 1wdy_A 2-5A-dependent ribonucl 97.9 1.9E-05 6.6E-10 77.7 7.9 56 888-955 218-273 (285)
77 1wdy_A 2-5A-dependent ribonucl 97.9 1.7E-05 5.9E-10 78.1 7.5 51 891-954 74-124 (285)
78 3utm_A Tankyrase-1; tankyrase, 97.9 1.6E-05 5.5E-10 80.9 7.2 87 847-955 25-111 (351)
79 3b7b_A Euchromatic histone-lys 97.9 2.6E-05 8.8E-10 76.0 8.4 83 849-954 114-196 (237)
80 2b0o_E UPLC1; arfgap, structur 97.9 2.3E-05 7.9E-10 82.4 8.7 85 849-956 193-280 (301)
81 2dzn_A Probable 26S proteasome 97.9 1.3E-05 4.6E-10 77.3 6.2 87 848-955 74-160 (228)
82 2rfa_A Transient receptor pote 97.9 1.7E-05 5.8E-10 77.3 6.9 90 848-954 77-177 (232)
83 3aji_A 26S proteasome non-ATPa 97.9 2.5E-05 8.5E-10 75.8 7.9 28 926-954 131-158 (231)
84 1yyh_A HN1;, notch 1, ankyrin 97.9 2.5E-05 8.6E-10 78.0 7.9 86 848-956 159-244 (253)
85 2l6b_A NR1C; ankyrin, consensu 97.8 1.4E-05 4.7E-10 70.3 5.2 55 889-956 9-63 (115)
86 2f8y_A Notch homolog 1, transl 97.8 3.9E-05 1.3E-09 74.1 8.5 86 848-956 127-212 (223)
87 4g8k_A 2-5A-dependent ribonucl 97.8 4.8E-05 1.6E-09 78.8 9.5 99 847-955 26-145 (337)
88 2zgd_A 3 repeat synthetic anky 97.8 2E-05 6.7E-10 69.9 5.7 55 888-955 23-77 (110)
89 4g8k_A 2-5A-dependent ribonucl 97.8 2.7E-05 9.2E-10 80.7 7.5 55 889-955 239-293 (337)
90 3lvq_E ARF-GAP with SH3 domain 97.8 2.4E-05 8.2E-10 87.4 7.6 86 848-956 173-261 (497)
91 1bi7_B P16INK4A, MTS1, multipl 97.8 1.1E-05 3.9E-10 74.9 4.0 83 848-954 14-97 (156)
92 3d9h_A CDNA FLJ77766, highly s 97.8 3.5E-05 1.2E-09 79.1 7.9 20 934-954 157-176 (285)
93 3ehr_A Osteoclast-stimulating 97.8 1.6E-05 5.6E-10 77.7 5.1 87 848-956 108-194 (222)
94 1ycs_B 53BP2, P53BP2; ankyrin 97.8 4.2E-05 1.4E-09 76.3 7.8 87 848-956 72-160 (239)
95 3ui2_A Signal recognition part 97.8 2.9E-05 1E-09 78.2 6.7 88 848-956 79-181 (244)
96 3eu9_A Huntingtin-interacting 97.8 4.5E-05 1.5E-09 73.4 7.6 58 889-959 177-234 (240)
97 3b7b_A Euchromatic histone-lys 97.8 4.7E-05 1.6E-09 74.2 7.8 54 890-955 78-131 (237)
98 1n11_A Ankyrin; clathrin, BAND 97.8 4E-05 1.4E-09 82.0 7.9 51 891-954 346-396 (437)
99 2fo1_E LIN-12 protein; beta-ba 97.7 5.3E-05 1.8E-09 80.8 8.6 87 848-956 281-367 (373)
100 3jue_A Arfgap with coiled-coil 97.7 4.5E-05 1.5E-09 83.5 8.2 85 848-955 237-321 (368)
101 2xai_A ASB-9, ankyrin repeat a 97.7 4.5E-05 1.5E-09 76.7 7.4 81 848-954 136-216 (261)
102 1sw6_A Regulatory protein SWI6 97.7 5E-05 1.7E-09 79.7 8.0 45 888-944 282-326 (327)
103 2fo1_E LIN-12 protein; beta-ba 97.7 2.4E-05 8.2E-10 83.4 5.6 59 848-912 127-189 (373)
104 3jue_A Arfgap with coiled-coil 97.7 5.1E-05 1.7E-09 83.0 8.3 87 848-955 201-288 (368)
105 3deo_A Signal recognition part 97.7 4.3E-05 1.5E-09 73.0 6.6 76 848-944 78-153 (183)
106 3d9h_A CDNA FLJ77766, highly s 97.7 5E-05 1.7E-09 77.9 7.3 83 848-956 192-274 (285)
107 3eu9_A Huntingtin-interacting 97.7 7.2E-05 2.5E-09 72.0 7.7 54 849-911 45-98 (240)
108 3lvq_E ARF-GAP with SH3 domain 97.7 5E-05 1.7E-09 84.8 7.4 90 849-955 135-227 (497)
109 1dcq_A PYK2-associated protein 97.6 4E-05 1.4E-09 79.6 5.7 54 889-955 169-225 (278)
110 2b0o_E UPLC1; arfgap, structur 97.6 8.2E-05 2.8E-09 78.2 8.1 89 850-955 155-246 (301)
111 1n11_A Ankyrin; clathrin, BAND 97.6 8.1E-05 2.8E-09 79.7 7.7 84 848-954 280-363 (437)
112 3kea_A K1L; tropism, ANK repea 97.6 8.7E-05 3E-09 76.3 7.4 55 848-912 64-118 (285)
113 3t8k_A Uncharacterized protein 97.6 0.00011 3.7E-09 72.2 7.2 60 847-912 39-104 (186)
114 1sw6_A Regulatory protein SWI6 97.6 8.8E-05 3E-09 77.9 7.0 63 864-944 111-174 (327)
115 3t8k_A Uncharacterized protein 97.2 0.00018 6.3E-09 70.5 4.5 73 865-956 96-175 (186)
116 2aja_A Ankyrin repeat family p 97.2 0.00013 4.5E-09 79.9 2.5 92 847-958 129-222 (376)
117 2aja_A Ankyrin repeat family p 96.3 0.00097 3.3E-08 73.1 1.7 91 847-955 93-183 (376)
118 2cxk_A Camta1, calmodulin bind 57.8 29 0.001 31.6 7.5 68 680-761 7-74 (95)
119 1uad_C RSEC5, exocyst complex 35.2 34 0.0012 31.1 4.1 41 677-719 5-46 (99)
No 1
>1ul4_A SPL4, squamosa promoter binding protein-like 4; transcription factor, SBP, flower development, DNA binding protein, structural genomics; NMR {Arabidopsis thaliana} SCOP: g.72.1.1
Probab=100.00 E-value=1.4e-39 Score=296.62 Aligned_cols=90 Identities=60% Similarity=1.047 Sum_probs=80.4
Q ss_pred CCCCCCCCcccCCChhhhccCccccccccccccccCcceeeeCCccchHhhhhccCCCCCCcccccchHHHHHhhHHhhh
Q 002028 165 PGTAPYPMCQVDNCKEDLSNAKDYHRRHKVCELHSKSTKALVGKQMQRFCQQCSRFHPLSEFDEGKRSCRRRLAGHNRRR 244 (978)
Q Consensus 165 ~~~~~~~~CqV~gC~~dL~~~k~Y~rRhrvCe~H~kA~~v~v~G~~~RFCQQCsrFH~L~eFd~~kRSCR~rL~~hn~RR 244 (978)
+|+++.++||||||++||+.+|+||+||||||.|+||++|+++|+++||||||+|||+|+|||+.|||||+||++||+||
T Consensus 3 ~~~~~~~~CqV~GC~~dL~~~k~Y~rR~rvCe~H~ka~~V~~~G~~~RFCQQCsrFH~L~eFD~~kRSCR~rL~~hn~RR 82 (94)
T 1ul4_A 3 SGSSGLRLCQVDRCTADMKEAKLYHRRHKVCEVHAKASSVFLSGLNQRFCQQCSRFHDLQEFDEAKRSCRRRLAGHNERR 82 (94)
T ss_dssp -----CCCCSSTTCCCCCTTCCHHHHHTTCCHHHHTCSCEEETTEEEEECTTTSSEEETTTCCSSCCSCSTTTTCCCCCC
T ss_pred CCCCCCCceecCCCCcchhhHHHHHHhhhhhHHHhcCCEEEECChhHHHHHHHhccCCHHHhccccchHHHHHHHHHHHh
Confidence 44578899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCCCccccc
Q 002028 245 RKTQPEDITS 254 (978)
Q Consensus 245 Rk~~~~~~~~ 254 (978)
||+++++.++
T Consensus 83 Rk~~~~~~~~ 92 (94)
T 1ul4_A 83 RKSSGESGPS 92 (94)
T ss_dssp CSCCCC----
T ss_pred ccCCCCcCCC
Confidence 9999997653
No 2
>1ul5_A SPL7, squamosa promoter binding protein-like 7; transcription factor, SBP, flower development, DNA binding protein, structural genomics; NMR {Arabidopsis thaliana} SCOP: g.72.1.1
Probab=100.00 E-value=1e-37 Score=281.63 Aligned_cols=82 Identities=44% Similarity=0.928 Sum_probs=77.9
Q ss_pred CCCCcccCCChhhhccCccccccccccccccCcceeeeCCccchHhhhhccCCCCCCcccccchHHHHHhhHHhhhccCC
Q 002028 169 PYPMCQVDNCKEDLSNAKDYHRRHKVCELHSKSTKALVGKQMQRFCQQCSRFHPLSEFDEGKRSCRRRLAGHNRRRRKTQ 248 (978)
Q Consensus 169 ~~~~CqV~gC~~dL~~~k~Y~rRhrvCe~H~kA~~v~v~G~~~RFCQQCsrFH~L~eFd~~kRSCR~rL~~hn~RRRk~~ 248 (978)
..++||||||++||+.+|+||+||||||.|+||++|+++|+++||||||+|||+|+|||++|||||+||++||+||||+.
T Consensus 2 ~~~~CqV~GC~~dLs~~k~Y~rR~rvCe~H~ka~~v~~~G~~~RFCQQC~rFH~L~eFD~~kRSCR~rL~~hn~RRR~~~ 81 (88)
T 1ul5_A 2 SVARCQVPDCEADISELKGYHKRHRVCLRCATASFVVLDGENKRYCQQCGKFHLLPDFDEGKRSCRRKLERHNNRRKRKP 81 (88)
T ss_dssp -CCSCEETTEECCCSSCCSSSGGGTCCHHHHHHSEEEETTEEEEECTTTSSEEEGGGBCSSTTSBSSSCCCSSSCCCCCS
T ss_pred CCCeeecCCCCCChhHhhHHHhhccccHHHcCCCEEEECCEeeHHHHHhccccChhhhccccchHHHHHHHHHHHhccCC
Confidence 46799999999999999999999999999999999999999999999999999999999999999999999999988765
Q ss_pred Cc
Q 002028 249 PE 250 (978)
Q Consensus 249 ~~ 250 (978)
++
T Consensus 82 ~~ 83 (88)
T 1ul5_A 82 VD 83 (88)
T ss_dssp CS
T ss_pred cc
Confidence 54
No 3
>1wj0_A Squamosa promoter-binding protein-like 12; DNA-binding domain, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Arabidopsis thaliana} SCOP: g.72.1.1
Probab=99.94 E-value=4e-29 Score=211.96 Aligned_cols=59 Identities=75% Similarity=1.229 Sum_probs=57.1
Q ss_pred CCCCcccCCChhhhccCccccccccccccccCcceeeeCCccchHhhhhccCCCCCCcc
Q 002028 169 PYPMCQVDNCKEDLSNAKDYHRRHKVCELHSKSTKALVGKQMQRFCQQCSRFHPLSEFD 227 (978)
Q Consensus 169 ~~~~CqV~gC~~dL~~~k~Y~rRhrvCe~H~kA~~v~v~G~~~RFCQQCsrFH~L~eFd 227 (978)
+.++||||||++||+.+|+|||||||||.|+||++|+++|.++||||||+|||+|+|||
T Consensus 2 ~~~~CqV~gC~~dl~~~k~Y~rR~rvCe~H~ka~~v~~~G~~~RFCQQCsrFH~L~eFD 60 (60)
T 1wj0_A 2 SAICCQVDNCGADLSKVKDYHRRHKVCEIHSKATTALVGGIMQRFCQQCSRFHVLEEFD 60 (60)
T ss_dssp -CEECSSTTCCCEETSCCSSTTTTTCCHHHHTCSCEEETTEEECCCSSSCSCCBTTSCC
T ss_pred CCceeecCCCCcChhHhHHHhhccccChhHcCCCEEEECCEEEehhhhccCccCcccCC
Confidence 56799999999999999999999999999999999999999999999999999999998
No 4
>1n0q_A 3ANK, 3 ankyrin repeats; structural protein; 1.26A {} SCOP: k.37.1.1
Probab=98.49 E-value=3.1e-07 Score=78.58 Aligned_cols=85 Identities=24% Similarity=0.283 Sum_probs=65.9
Q ss_pred HHHHHhccchHHHHHHHHHHHHhccccCCCccHHHHHHhhhchHHHHHHHcCChhHHHHHHhhcccCCCCCCCccccCCC
Q 002028 849 LLVFSVDRGCCALVKAILDILVEGNLSMDGLSRESLEMLWEIQLLNRAVKMKCRRMVDLLIHYSLTSSNDTPQKYIFPPN 928 (978)
Q Consensus 849 LL~FAverdWcAVvkkLLdiL~~g~v~~~~~s~~~~~~l~e~~LLH~AV~~~s~~mVelLL~~~~~~~~~~~~~y~F~pd 928 (978)
.|-+|+..+-..+++.||.. +.+.+.... .+.||||+||+.++.+||++|+.+. .+++
T Consensus 5 ~L~~A~~~~~~~~v~~Ll~~----g~~~n~~d~------~g~t~L~~A~~~~~~~~v~~Ll~~g------------a~~~ 62 (93)
T 1n0q_A 5 PLHLAARNGHLEVVKLLLEA----GADVNAKDK------NGRTPLHLAARNGHLEVVKLLLEAG------------ADVN 62 (93)
T ss_dssp HHHHHHHHTCHHHHHHHHHT----TCCTTCCCT------TSCCHHHHHHHTTCHHHHHHHHHTT------------CCTT
T ss_pred HHHHHHHcCCHHHHHHHHHc----CCCCcccCC------CCCCHHHHHHHcCCHHHHHHHHHcC------------CCCC
Confidence 46678888888888877753 333333321 4789999999999999999999874 3466
Q ss_pred CCCCCCCchhhhhcccCChhHHHHHhhc
Q 002028 929 LAGPGGITPLHLAACTSDSDDIIDALTN 956 (978)
Q Consensus 929 ~~GpsGlTPLHIAAs~~g~~~vldaLt~ 956 (978)
..+..|+||||+|+.. +..++++.|.+
T Consensus 63 ~~d~~g~t~l~~A~~~-~~~~~~~~Ll~ 89 (93)
T 1n0q_A 63 AKDKNGRTPLHLAARN-GHLEVVKLLLE 89 (93)
T ss_dssp CCCTTSCCHHHHHHHT-TCHHHHHHHHH
T ss_pred ccCCCCCCHHHHHHHc-CCHHHHHHHHH
Confidence 7788999999999987 88899998854
No 5
>4gpm_A Engineered protein OR264; de novo protein, structural genomics, PSI-biology, northeast structural genomics consortium, NESG; 2.00A {Synthetic construct} PDB: 4gmr_A
Probab=98.47 E-value=2.9e-07 Score=89.32 Aligned_cols=85 Identities=21% Similarity=0.275 Sum_probs=68.0
Q ss_pred HHHHHhccchHHHHHHHHHHHHhccccCCCccHHHHHHhhhchHHHHHHHcCChhHHHHHHhhcccCCCCCCCccccCCC
Q 002028 849 LLVFSVDRGCCALVKAILDILVEGNLSMDGLSRESLEMLWEIQLLNRAVKMKCRRMVDLLIHYSLTSSNDTPQKYIFPPN 928 (978)
Q Consensus 849 LL~FAverdWcAVvkkLLdiL~~g~v~~~~~s~~~~~~l~e~~LLH~AV~~~s~~mVelLL~~~~~~~~~~~~~y~F~pd 928 (978)
-|-+|+.++...+++.||.- +.+.+.... .+.||||+||+.++.++|++||.+. -+++
T Consensus 73 pLh~A~~~g~~~~v~~Ll~~----gadvn~~d~------~G~TpLh~A~~~g~~~~v~~Ll~~g------------ad~~ 130 (169)
T 4gpm_A 73 PLHHAAENGHKEVVKLLISK----GADVNAKDS------DGRTPLHHAAENGHKEVVKLLISKG------------ADVN 130 (169)
T ss_dssp HHHHHHHTTCHHHHHHHHHT----TCCTTCCCT------TSCCHHHHHHHTTCHHHHHHHHHTT------------CCTT
T ss_pred HHHHHHHcCCHHHHHHHHHC----cCCCCCCCC------CCCCHHHHHHHcCCHHHHHHHHHcC------------CCcc
Confidence 57788999999998888753 333333321 4789999999999999999999874 3467
Q ss_pred CCCCCCCchhhhhcccCChhHHHHHhhc
Q 002028 929 LAGPGGITPLHLAACTSDSDDIIDALTN 956 (978)
Q Consensus 929 ~~GpsGlTPLHIAAs~~g~~~vldaLt~ 956 (978)
..+..|+||||+|+.. +..+|++.|.+
T Consensus 131 ~~d~~G~TpL~~A~~~-g~~~iv~~Ll~ 157 (169)
T 4gpm_A 131 TSDSDGRTPLDLAREH-GNEEVVKLLEK 157 (169)
T ss_dssp CCCTTSCCHHHHHHHT-TCHHHHHHHHT
T ss_pred ccCCCCCCHHHHHHHc-CCHHHHHHHHH
Confidence 7788999999999987 88899999965
No 6
>3aaa_C Myotrophin, protein V-1; actin capping protein, barbed END capping, inhibition, prote binding, actin capping, actin-binding, cytoskeleton, ANK RE; 2.20A {Homo sapiens} PDB: 1myo_A 2kxp_C 2myo_A
Probab=98.45 E-value=4.4e-07 Score=81.06 Aligned_cols=86 Identities=15% Similarity=0.091 Sum_probs=67.7
Q ss_pred HHHHHHHhccchHHHHHHHHHHHHhccccCCCccHHHHHHhhhchHHHHHHHcCChhHHHHHHhhcccCCCCCCCccccC
Q 002028 847 KFLLVFSVDRGCCALVKAILDILVEGNLSMDGLSRESLEMLWEIQLLNRAVKMKCRRMVDLLIHYSLTSSNDTPQKYIFP 926 (978)
Q Consensus 847 k~LL~FAverdWcAVvkkLLdiL~~g~v~~~~~s~~~~~~l~e~~LLH~AV~~~s~~mVelLL~~~~~~~~~~~~~y~F~ 926 (978)
...|-+|+..+...+++.||.. +.+...... .+.|+||+|++.++.+||++|+.+. .+
T Consensus 8 ~~~l~~A~~~~~~~~v~~ll~~----~~~~~~~~~------~g~t~L~~A~~~~~~~~v~~Ll~~g------------~~ 65 (123)
T 3aaa_C 8 DKEFMWALKNGDLDEVKDYVAK----GEDVNRTLE------GGRKPLHYAADCGQLEILEFLLLKG------------AD 65 (123)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHT----TCCTTSCCT------TSSCHHHHHHHTTCHHHHHHHHTTT------------CC
T ss_pred chHHHHHHHcCCHHHHHHHHHc----CCCcCccCC------CCCcHHHHHHHcCCHHHHHHHHHcC------------CC
Confidence 3568889999999999998863 222222221 3789999999999999999999763 34
Q ss_pred CCCCCCCCCchhhhhcccCChhHHHHHhh
Q 002028 927 PNLAGPGGITPLHLAACTSDSDDIIDALT 955 (978)
Q Consensus 927 pd~~GpsGlTPLHIAAs~~g~~~vldaLt 955 (978)
++..+..|+||||+|+.. +..+++..|.
T Consensus 66 ~~~~d~~g~tpL~~A~~~-~~~~~v~~Ll 93 (123)
T 3aaa_C 66 INAPDKHHITPLLSAVYE-GHVSCVKLLL 93 (123)
T ss_dssp TTCCCTTSCCHHHHHHHH-TCHHHHHHHH
T ss_pred CCcCCCCCCCHHHHHHHc-CCHHHHHHHH
Confidence 667788999999999987 7788999883
No 7
>2zgd_A 3 repeat synthetic ankyrin; ankyrin repeat, hydroxylated, de novo protein; 1.90A {Synthetic} PDB: 2zgg_A 2xen_A
Probab=98.37 E-value=7.4e-07 Score=79.09 Aligned_cols=86 Identities=14% Similarity=0.094 Sum_probs=68.3
Q ss_pred HHHHHHHHhccchHHHHHHHHHHHHhccccCCCccHHHHHHhhhchHHHHHHHcCChhHHHHHHhhcccCCCCCCCcccc
Q 002028 846 FKFLLVFSVDRGCCALVKAILDILVEGNLSMDGLSRESLEMLWEIQLLNRAVKMKCRRMVDLLIHYSLTSSNDTPQKYIF 925 (978)
Q Consensus 846 Fk~LL~FAverdWcAVvkkLLdiL~~g~v~~~~~s~~~~~~l~e~~LLH~AV~~~s~~mVelLL~~~~~~~~~~~~~y~F 925 (978)
....|-+|+..+-..+++.||.. +.+..... -.+.|+||+||+.++.+||++||.+. .
T Consensus 24 g~t~L~~A~~~g~~~~v~~Ll~~----g~~i~~~d------~~g~tpLh~A~~~~~~~~v~~Ll~~g------------a 81 (110)
T 2zgd_A 24 LGKKLLEAARAGQDDEVRILMAN----GADVAAKD------KNGSTPLHLAARNGHLEVVKLLLEAG------------A 81 (110)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHT----TCCTTCCC------TTCCCHHHHHHHTTCHHHHHHHHHTT------------C
T ss_pred cchHHHHHHHcCCHHHHHHHHHc----CCCCCccC------CCCCCHHHHHHHcCCHHHHHHHHHcC------------C
Confidence 45678899999999999988864 23333222 14789999999999999999999874 3
Q ss_pred CCCCCCCCCCchhhhhcccCChhHHHHHh
Q 002028 926 PPNLAGPGGITPLHLAACTSDSDDIIDAL 954 (978)
Q Consensus 926 ~pd~~GpsGlTPLHIAAs~~g~~~vldaL 954 (978)
+++..+..|+||||+|+.. +..++++.|
T Consensus 82 ~~~~~d~~g~tpl~~A~~~-~~~~~~~~L 109 (110)
T 2zgd_A 82 DVXAQDKFGKTAFDISIDN-GNEDLAEIL 109 (110)
T ss_dssp CTTCCCTTSCCHHHHHHHH-TCHHHHHHH
T ss_pred CccccccCCCcHHHHHHHc-CCHHHHHHh
Confidence 4666788999999999987 888888876
No 8
>4gpm_A Engineered protein OR264; de novo protein, structural genomics, PSI-biology, northeast structural genomics consortium, NESG; 2.00A {Synthetic construct} PDB: 4gmr_A
Probab=98.36 E-value=7.6e-07 Score=86.36 Aligned_cols=84 Identities=23% Similarity=0.261 Sum_probs=66.5
Q ss_pred HHHHHhccchHHHHHHHHHHHHhccccCCCccHHHHHHhhhchHHHHHHHcCChhHHHHHHhhcccCCCCCCCccccCCC
Q 002028 849 LLVFSVDRGCCALVKAILDILVEGNLSMDGLSRESLEMLWEIQLLNRAVKMKCRRMVDLLIHYSLTSSNDTPQKYIFPPN 928 (978)
Q Consensus 849 LL~FAverdWcAVvkkLLdiL~~g~v~~~~~s~~~~~~l~e~~LLH~AV~~~s~~mVelLL~~~~~~~~~~~~~y~F~pd 928 (978)
.|-+|+..+...+++.||.- +.+..... -.+.||||+||+.++.++|++||.+. -+++
T Consensus 40 ~l~~a~~~~~~~~~~~ll~~----gad~~~~d------~~g~TpLh~A~~~g~~~~v~~Ll~~g------------advn 97 (169)
T 4gpm_A 40 PLHHAAENGHKEVVKLLISK----GADVNAKD------SDGRTPLHHAAENGHKEVVKLLISKG------------ADVN 97 (169)
T ss_dssp HHHHHHHTTCHHHHHHHHHT----TCCTTCCC------TTSCCHHHHHHHTTCHHHHHHHHHTT------------CCTT
T ss_pred HHHHHHHcCCHHHHHHHHhc----ccchhhhc------cCCCCHHHHHHHcCCHHHHHHHHHCc------------CCCC
Confidence 46678888888888888752 23333222 14789999999999999999999874 3477
Q ss_pred CCCCCCCchhhhhcccCChhHHHHHhh
Q 002028 929 LAGPGGITPLHLAACTSDSDDIIDALT 955 (978)
Q Consensus 929 ~~GpsGlTPLHIAAs~~g~~~vldaLt 955 (978)
..+..|+||||+||.. |..+++..|.
T Consensus 98 ~~d~~G~TpLh~A~~~-g~~~~v~~Ll 123 (169)
T 4gpm_A 98 AKDSDGRTPLHHAAEN-GHKEVVKLLI 123 (169)
T ss_dssp CCCTTSCCHHHHHHHT-TCHHHHHHHH
T ss_pred CCCCCCCCHHHHHHHc-CCHHHHHHHH
Confidence 7889999999999987 8889999993
No 9
>1k1a_A B-cell lymphoma 3-encoded protein; BCL-3, NF-kappab transcription factors, ikappab proteins; 1.86A {Homo sapiens} SCOP: d.211.1.1 PDB: 1k1b_A
Probab=98.29 E-value=1.8e-06 Score=83.92 Aligned_cols=88 Identities=24% Similarity=0.252 Sum_probs=57.3
Q ss_pred HHHHHHhccchHHHHHHHHHHHHhccccCCCccHHHHHHhhhchHHHHHHHcCChhHHHHHHhhcccCCCCCCCccccCC
Q 002028 848 FLLVFSVDRGCCALVKAILDILVEGNLSMDGLSRESLEMLWEIQLLNRAVKMKCRRMVDLLIHYSLTSSNDTPQKYIFPP 927 (978)
Q Consensus 848 ~LL~FAverdWcAVvkkLLdiL~~g~v~~~~~s~~~~~~l~e~~LLH~AV~~~s~~mVelLL~~~~~~~~~~~~~y~F~p 927 (978)
..|-+|+.++-..+++.||..+.....+...... .+.||||+|++.++.+||++|+.+.. ++
T Consensus 11 t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~------~g~t~L~~A~~~~~~~~v~~Ll~~g~------------~~ 72 (241)
T 1k1a_A 11 TPLHIAVVQGNLPAVHRLVNLFQQGGRELDIYNN------LRQTPLHLAVITTLPSVVRLLVTAGA------------SP 72 (241)
T ss_dssp CHHHHHHHTTCHHHHHHHHHHHHHTTCCSCCCCT------TSCCHHHHHHHTTCHHHHHHHHHTTC------------CT
T ss_pred cHHHHHHHcCCHHHHHHHHHHHHhcCCCCCcccc------cCCCHHHHHHHcCCHHHHHHHHHcCC------------Cc
Confidence 4678888999999999999887776655444432 36788888888888888888887642 23
Q ss_pred CCCCCCCCchhhhhcccCChhHHHHHh
Q 002028 928 NLAGPGGITPLHLAACTSDSDDIIDAL 954 (978)
Q Consensus 928 d~~GpsGlTPLHIAAs~~g~~~vldaL 954 (978)
+..+..|+||||+|+.. +..+++..|
T Consensus 73 ~~~~~~g~t~l~~A~~~-~~~~~~~~L 98 (241)
T 1k1a_A 73 MALDRHGQTAAHLACEH-RSPTCLRAL 98 (241)
T ss_dssp TCCCTTSCCHHHHHHHT-TCHHHHHHH
T ss_pred cccCCCCCCHHHHHHHc-CCHHHHHHH
Confidence 33344455555555443 334444444
No 10
>3deo_A Signal recognition particle 43 kDa protein; chloroplast SRP system, signal sequence, ankyrin repeat, chromodomain, type I turn; 1.50A {Arabidopsis thaliana} SCOP: b.34.13.2 k.37.1.1 PDB: 3dep_A 1x32_A
Probab=98.28 E-value=1.5e-06 Score=83.20 Aligned_cols=86 Identities=17% Similarity=0.220 Sum_probs=65.8
Q ss_pred HHHHHHHHHhccchHHHHHHHHHHHHhccccCCCccHHHHHHhhhchHHHHHHHcCChhHHHHHHhhcccCCCCCCCccc
Q 002028 845 RFKFLLVFSVDRGCCALVKAILDILVEGNLSMDGLSRESLEMLWEIQLLNRAVKMKCRRMVDLLIHYSLTSSNDTPQKYI 924 (978)
Q Consensus 845 RFk~LL~FAverdWcAVvkkLLdiL~~g~v~~~~~s~~~~~~l~e~~LLH~AV~~~s~~mVelLL~~~~~~~~~~~~~y~ 924 (978)
.-+..|-+|+.++...+++.||. . .+.+.... .+.||||+|++.++.+||++|+.+.
T Consensus 43 ~g~t~L~~A~~~g~~~~v~~Ll~---~--~~~~~~d~------~g~t~L~~A~~~~~~~~v~~Ll~~g------------ 99 (183)
T 3deo_A 43 EYETPWWTAARKADEQALSQLLE---D--RDVDAVDE------NGRTALLFVAGLGSDKCVRLLAEAG------------ 99 (183)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHTT---T--SCTTCCCT------TSCCHHHHHHHHTCHHHHHHHHHTT------------
T ss_pred CCCCHHHHHHHcCCHHHHHHHHh---c--CCCCCcCC------CCCCHHHHHHHcCCHHHHHHHHHcC------------
Confidence 34567888999999999999887 2 22222221 4779999999999999999999874
Q ss_pred cCCCCCC-CCCCchhhhhcccCChhHHHHHh
Q 002028 925 FPPNLAG-PGGITPLHLAACTSDSDDIIDAL 954 (978)
Q Consensus 925 F~pd~~G-psGlTPLHIAAs~~g~~~vldaL 954 (978)
.+++..+ ..|+||||+|+.. +..++++.|
T Consensus 100 a~~~~~~~~~g~tpL~~A~~~-~~~~~v~~L 129 (183)
T 3deo_A 100 ADLDHRDMRGGLTALHMAAGY-VRPEVVEAL 129 (183)
T ss_dssp CCTTCCCSSSSCCHHHHHHHT-TCHHHHHHH
T ss_pred CCCCcCCCCCCCCHHHHHHhc-CcHHHHHHH
Confidence 2355455 7899999999877 778888888
No 11
>3c5r_A BARD-1, BRCA1-associated ring domain protein 1; ankyrin repeat, helix, extended loop, four repeat, PR ANK repeat, disease mutation, metal-binding; 2.00A {Homo sapiens} SCOP: k.37.1.1
Probab=98.27 E-value=1.2e-06 Score=79.42 Aligned_cols=83 Identities=24% Similarity=0.186 Sum_probs=48.0
Q ss_pred HHHHHhccchHHHHHHHHHHHHhccccCCCccHHHHHHhhhchHHHHHHHcCChhHHHHHHhhcccCCCCCCCccccCCC
Q 002028 849 LLVFSVDRGCCALVKAILDILVEGNLSMDGLSRESLEMLWEIQLLNRAVKMKCRRMVDLLIHYSLTSSNDTPQKYIFPPN 928 (978)
Q Consensus 849 LL~FAverdWcAVvkkLLdiL~~g~v~~~~~s~~~~~~l~e~~LLH~AV~~~s~~mVelLL~~~~~~~~~~~~~y~F~pd 928 (978)
.|-+|+..+...+++.||.. +.+..... ..+.|+||+|+..++.+||++|+.+. .+++
T Consensus 13 ~L~~A~~~~~~~~~~~Ll~~----g~~~~~~~------~~g~t~L~~A~~~~~~~~~~~Ll~~g------------~~~~ 70 (137)
T 3c5r_A 13 LLHIASIKGDIPSVEYLLQN----GSDPNVKD------HAGWTPLHEACNHGHLKVVELLLQHK------------ALVN 70 (137)
T ss_dssp HHHHHHHHTCHHHHHHHHHT----TCCSCCCC------TTSCCHHHHHHHTTCHHHHHHHHHTT------------CCTT
T ss_pred HHHHHHHcCCHHHHHHHHHc----CCCCCcCC------CCCCCHHHHHHHcCCHHHHHHHHHcC------------Cccc
Confidence 45666666666666666652 12222111 13567777777777777777777553 2244
Q ss_pred CCCCCCCchhhhhcccCChhHHHHHh
Q 002028 929 LAGPGGITPLHLAACTSDSDDIIDAL 954 (978)
Q Consensus 929 ~~GpsGlTPLHIAAs~~g~~~vldaL 954 (978)
..+..|.||||+|+.. +..+++..|
T Consensus 71 ~~~~~g~t~L~~A~~~-~~~~~v~~L 95 (137)
T 3c5r_A 71 TTGYQNDSPLHDAAKN-GHVDIVKLL 95 (137)
T ss_dssp CCCGGGCCHHHHHHHT-TCHHHHHHH
T ss_pred CcCCCCCCHHHHHHHc-CCHHHHHHH
Confidence 4455666666666655 555666666
No 12
>2jab_A H10-2-G3; HER2, darpin, ankyrin repeat protein, membrane protein, human epidermal growth factor receptor 2, de novo protein; 1.70A {} PDB: 3hg0_D 2xzt_G 2xzd_G 2y0b_G 2v4h_C
Probab=98.26 E-value=1.7e-06 Score=78.71 Aligned_cols=86 Identities=21% Similarity=0.227 Sum_probs=60.0
Q ss_pred HHHHHHHHhccchHHHHHHHHHHHHhccccCCCccHHHHHHhhhchHHHHHHHcCChhHHHHHHhhcccCCCCCCCcccc
Q 002028 846 FKFLLVFSVDRGCCALVKAILDILVEGNLSMDGLSRESLEMLWEIQLLNRAVKMKCRRMVDLLIHYSLTSSNDTPQKYIF 925 (978)
Q Consensus 846 Fk~LL~FAverdWcAVvkkLLdiL~~g~v~~~~~s~~~~~~l~e~~LLH~AV~~~s~~mVelLL~~~~~~~~~~~~~y~F 925 (978)
-...|-+|+..+-..+++.||.. +.+..... ..+.|+||+||+.++.+||++|+.+. .
T Consensus 14 ~~t~l~~A~~~g~~~~v~~Ll~~----g~~~~~~~------~~g~t~L~~A~~~~~~~~v~~Ll~~g------------~ 71 (136)
T 2jab_A 14 LGKKLLEAARAGQDDEVRILMAN----GADVNAKD------EYGLTPLYLATAHGHLEIVEVLLKNG------------A 71 (136)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHT----TCCTTCCC------TTSCCHHHHHHHHTCHHHHHHHHHTT------------C
T ss_pred ccHHHHHHHHhCCHHHHHHHHHc----CCCCCCcC------CCCCCHHHHHHHcCCHHHHHHHHHcC------------C
Confidence 45677888888888888888764 22222222 13678888888888888888888763 2
Q ss_pred CCCCCCCCCCchhhhhcccCChhHHHHHh
Q 002028 926 PPNLAGPGGITPLHLAACTSDSDDIIDAL 954 (978)
Q Consensus 926 ~pd~~GpsGlTPLHIAAs~~g~~~vldaL 954 (978)
+++..+..|.||||+|+.. +..+++..|
T Consensus 72 ~~~~~d~~g~t~L~~A~~~-~~~~~v~~L 99 (136)
T 2jab_A 72 DVNAVDAIGFTPLHLAAFI-GHLEIAEVL 99 (136)
T ss_dssp CTTCCCTTCCCHHHHHHHH-TCHHHHHHH
T ss_pred CCCcCCCCCCCHHHHHHHc-CCHHHHHHH
Confidence 3555566778888888776 666777777
No 13
>2jab_A H10-2-G3; HER2, darpin, ankyrin repeat protein, membrane protein, human epidermal growth factor receptor 2, de novo protein; 1.70A {} PDB: 3hg0_D 2xzt_G 2xzd_G 2y0b_G 2v4h_C
Probab=98.26 E-value=1.8e-06 Score=78.66 Aligned_cols=86 Identities=14% Similarity=0.207 Sum_probs=67.1
Q ss_pred HHHHHHhccchHHHHHHHHHHHHhccccCCCccHHHHHHhhhchHHHHHHHcCChhHHHHHHhhcccCCCCCCCccccCC
Q 002028 848 FLLVFSVDRGCCALVKAILDILVEGNLSMDGLSRESLEMLWEIQLLNRAVKMKCRRMVDLLIHYSLTSSNDTPQKYIFPP 927 (978)
Q Consensus 848 ~LL~FAverdWcAVvkkLLdiL~~g~v~~~~~s~~~~~~l~e~~LLH~AV~~~s~~mVelLL~~~~~~~~~~~~~y~F~p 927 (978)
..|-+|+..+-..+++.||.. +.+...... .+.|+||+|++.++.+||++|+.+. .++
T Consensus 49 t~L~~A~~~~~~~~v~~Ll~~----g~~~~~~d~------~g~t~L~~A~~~~~~~~v~~Ll~~g------------~~~ 106 (136)
T 2jab_A 49 TPLYLATAHGHLEIVEVLLKN----GADVNAVDA------IGFTPLHLAAFIGHLEIAEVLLKHG------------ADV 106 (136)
T ss_dssp CHHHHHHHHTCHHHHHHHHHT----TCCTTCCCT------TCCCHHHHHHHHTCHHHHHHHHHTT------------CCT
T ss_pred CHHHHHHHcCCHHHHHHHHHc----CCCCCcCCC------CCCCHHHHHHHcCCHHHHHHHHHcC------------CCC
Confidence 467788888888888888863 223222221 4789999999999999999999874 346
Q ss_pred CCCCCCCCchhhhhcccCChhHHHHHhhc
Q 002028 928 NLAGPGGITPLHLAACTSDSDDIIDALTN 956 (978)
Q Consensus 928 d~~GpsGlTPLHIAAs~~g~~~vldaLt~ 956 (978)
+..+..|.||||+|+.. +..++++.|.+
T Consensus 107 ~~~~~~g~tpl~~A~~~-~~~~~~~~Ll~ 134 (136)
T 2jab_A 107 NAQDKFGKTAFDISIGN-GNEDLAEILQK 134 (136)
T ss_dssp TCCCTTSCCHHHHHHHT-TCHHHHHHHHH
T ss_pred cCcCCCCCCHHHHHHHC-CCHHHHHHHHH
Confidence 66788999999999987 88899998853
No 14
>3twr_A Tankyrase-2; ankyrin repeat, protein-protein interaction, substrate recru poly(ADP-ribosyl)ation; HET: PE8; 1.55A {Homo sapiens} SCOP: d.211.1.0 PDB: 3tws_A* 3twt_A* 3twv_A* 3tww_A 3twx_A 3twq_A 3twu_A 2y0i_S*
Probab=98.25 E-value=2.2e-06 Score=79.71 Aligned_cols=84 Identities=21% Similarity=0.214 Sum_probs=48.0
Q ss_pred HHHHHHhccchHHHHHHHHHHHHhccccCCCccHHHHHHhhhchHHHHHHHcCChhHHHHHHhhcccCCCCCCCccccCC
Q 002028 848 FLLVFSVDRGCCALVKAILDILVEGNLSMDGLSRESLEMLWEIQLLNRAVKMKCRRMVDLLIHYSLTSSNDTPQKYIFPP 927 (978)
Q Consensus 848 ~LL~FAverdWcAVvkkLLdiL~~g~v~~~~~s~~~~~~l~e~~LLH~AV~~~s~~mVelLL~~~~~~~~~~~~~y~F~p 927 (978)
..|-+|+..+...+++.||.. +.+...... .+.|+||+|++.++.+||++|+.+. .++
T Consensus 44 t~L~~A~~~~~~~~v~~Ll~~----g~~~~~~~~------~g~t~L~~A~~~~~~~~v~~Ll~~g------------~~~ 101 (165)
T 3twr_A 44 TPLHFAAGYNRVSVVEYLLQH----GADVHAKDK------GGLVPLHNACSYGHYEVAELLVKHG------------AVV 101 (165)
T ss_dssp CHHHHHHHTTCHHHHHHHHHT----TCCTTCCCT------TSCCHHHHHHHTTCHHHHHHHHHTT------------CCT
T ss_pred CHHHHHHHcChHHHHHHHHhc----CCCCCccCC------CCCCHHHHHHHcCcHHHHHHHHhCC------------CCC
Confidence 456677777777777777763 222222211 3557777777777777777777653 223
Q ss_pred CCCCCCCCchhhhhcccCChhHHHHHh
Q 002028 928 NLAGPGGITPLHLAACTSDSDDIIDAL 954 (978)
Q Consensus 928 d~~GpsGlTPLHIAAs~~g~~~vldaL 954 (978)
+..+..|+||||+|+.. +..+++..|
T Consensus 102 ~~~~~~g~t~L~~A~~~-~~~~~v~~L 127 (165)
T 3twr_A 102 NVADLWKFTPLHEAAAK-GKYEICKLL 127 (165)
T ss_dssp TCCCTTCCCHHHHHHHT-TCHHHHHHH
T ss_pred CCcCCCCCCHHHHHHHc-CCHHHHHHH
Confidence 44445555555555554 444555555
No 15
>3ehr_A Osteoclast-stimulating factor 1; beta barrel, helix-turn-helix, SH3, ankyrin repeat, signaling protein, ANK repeat, cytoplasm, phosphoprotein; 1.95A {Homo sapiens} PDB: 3ehq_A
Probab=98.23 E-value=1.8e-06 Score=84.46 Aligned_cols=85 Identities=25% Similarity=0.255 Sum_probs=54.5
Q ss_pred HHHHHHhccchHHHHHHHHHHHHhccccCCCccHHHHHHhhhchHHHHHHHcCChhHHHHHHhhcccCCCCCCCccccCC
Q 002028 848 FLLVFSVDRGCCALVKAILDILVEGNLSMDGLSRESLEMLWEIQLLNRAVKMKCRRMVDLLIHYSLTSSNDTPQKYIFPP 927 (978)
Q Consensus 848 ~LL~FAverdWcAVvkkLLdiL~~g~v~~~~~s~~~~~~l~e~~LLH~AV~~~s~~mVelLL~~~~~~~~~~~~~y~F~p 927 (978)
..|-+|+.++...+++.||.. +.+...... .+.|+||+||..++.++|++||.+. ..++
T Consensus 75 t~L~~A~~~g~~~~v~~Ll~~----g~~~~~~~~------~g~t~L~~A~~~~~~~~v~~Ll~~~-----------g~~~ 133 (222)
T 3ehr_A 75 NPLHEAAKRGNLSWLRECLDN----RVGVNGLDK------AGSTALYWACHGGHKDIVEMLFTQP-----------NIEL 133 (222)
T ss_dssp CHHHHHHHHTCHHHHHHHHHT----TCCTTCCCT------TSCCHHHHHHHTTCHHHHHHHTTST-----------TCCC
T ss_pred cccccccccCcHHHHHHHHhC----CCCccccCC------CCCCHHHHHHHcCCHHHHHHHHcCC-----------CCCc
Confidence 356667777777777777752 222222211 3668888888888888888887652 2335
Q ss_pred CCCCCCCCchhhhhcccCChhHHHHHh
Q 002028 928 NLAGPGGITPLHLAACTSDSDDIIDAL 954 (978)
Q Consensus 928 d~~GpsGlTPLHIAAs~~g~~~vldaL 954 (978)
+..+..|+||||+||.. +..+++..|
T Consensus 134 ~~~d~~g~tpL~~A~~~-~~~~~v~~L 159 (222)
T 3ehr_A 134 NQQNKLGDTALHAAAWK-GYADIVQLL 159 (222)
T ss_dssp CCCCTTSCCHHHHHHHH-TCHHHHHHH
T ss_pred cccCCCCCCHHHHHHHc-CCHHHHHHH
Confidence 55667777777777766 666777777
No 16
>1ycs_B 53BP2, P53BP2; ankyrin repeats, SH3, tumor suppressor, multigene family, nuclear protein, phosphorylation, disease mutation, polymorphism; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.211.1.1 PDB: 4a63_B
Probab=98.21 E-value=1.9e-06 Score=85.98 Aligned_cols=84 Identities=27% Similarity=0.242 Sum_probs=58.8
Q ss_pred HHHHHHhccchHHHHHHHHHHHHhccccCCCccHHHHHHhhhchHHHHHHHcCChhHHHHHHhhcccCCCCCCCccccCC
Q 002028 848 FLLVFSVDRGCCALVKAILDILVEGNLSMDGLSRESLEMLWEIQLLNRAVKMKCRRMVDLLIHYSLTSSNDTPQKYIFPP 927 (978)
Q Consensus 848 ~LL~FAverdWcAVvkkLLdiL~~g~v~~~~~s~~~~~~l~e~~LLH~AV~~~s~~mVelLL~~~~~~~~~~~~~y~F~p 927 (978)
..|-+|+..+-..+++.||.- +.+...... .+.|+||+||+.++.+||++||.+. .++
T Consensus 39 t~L~~A~~~g~~~~v~~Ll~~----g~~~~~~d~------~g~t~L~~A~~~g~~~~v~~Ll~~g------------a~~ 96 (239)
T 1ycs_B 39 ALLLDSSLEGEFDLVQRIIYE----VDDPSLPND------EGITALHNAVCAGHTEIVKFLVQFG------------VNV 96 (239)
T ss_dssp HHHHHHHHHTCHHHHHHHTST----TSSCCCCCT------TSCCHHHHHHHHTCHHHHHHHHHHT------------CCT
T ss_pred HHHHHHHHcCCHHHHHHHHHc----CCCCCCcCC------CCCCHHHHHHHcCCHHHHHHHHHcC------------CCC
Confidence 567778888888888877742 222222221 3678888888888888888888764 235
Q ss_pred CCCCCCCCchhhhhcccCChhHHHHHh
Q 002028 928 NLAGPGGITPLHLAACTSDSDDIIDAL 954 (978)
Q Consensus 928 d~~GpsGlTPLHIAAs~~g~~~vldaL 954 (978)
+..+..|+||||+||.. +..++++.|
T Consensus 97 ~~~d~~g~tpL~~A~~~-~~~~~v~~L 122 (239)
T 1ycs_B 97 NAADSDGWTPLHCAASC-NNVQVCKFL 122 (239)
T ss_dssp TCCCTTCCCHHHHHHHT-TCHHHHHHH
T ss_pred CccCCCCCCHHHHHHHc-CCHHHHHHH
Confidence 56677788888888766 667777777
No 17
>1n0r_A 4ANK, 4 ankyrin repeats; structural protein; 1.50A {} SCOP: k.37.1.1
Probab=98.21 E-value=3.5e-06 Score=73.60 Aligned_cols=83 Identities=24% Similarity=0.253 Sum_probs=53.3
Q ss_pred HHHHHhccchHHHHHHHHHHHHhccccCCCccHHHHHHhhhchHHHHHHHcCChhHHHHHHhhcccCCCCCCCccccCCC
Q 002028 849 LLVFSVDRGCCALVKAILDILVEGNLSMDGLSRESLEMLWEIQLLNRAVKMKCRRMVDLLIHYSLTSSNDTPQKYIFPPN 928 (978)
Q Consensus 849 LL~FAverdWcAVvkkLLdiL~~g~v~~~~~s~~~~~~l~e~~LLH~AV~~~s~~mVelLL~~~~~~~~~~~~~y~F~pd 928 (978)
.|.+|+..+...+++.||..- .+..... ..+.++||+||+.++.+||++|+.+. .+++
T Consensus 5 ~L~~A~~~~~~~~v~~Ll~~~----~~~~~~~------~~g~t~L~~A~~~~~~~~~~~Ll~~g------------~~~~ 62 (126)
T 1n0r_A 5 PLHLAARNGHLEVVKLLLEAG----ADVNAKD------KNGRTPLHLAARNGHLEVVKLLLEAG------------ADVN 62 (126)
T ss_dssp HHHHHHHHTCHHHHHHHHHHT----CCTTCCC------TTSCCHHHHHHHHTCHHHHHHHHHTT------------CCTT
T ss_pred HHHHHHHcCcHHHHHHHHHcC----CCCCCcC------CCCCcHHHHHHHcCcHHHHHHHHHcC------------CCCc
Confidence 566778888888888777642 2222121 13567788888888888888777653 2344
Q ss_pred CCCCCCCchhhhhcccCChhHHHHHh
Q 002028 929 LAGPGGITPLHLAACTSDSDDIIDAL 954 (978)
Q Consensus 929 ~~GpsGlTPLHIAAs~~g~~~vldaL 954 (978)
..+..|.||||+|+.. +..+++..|
T Consensus 63 ~~~~~g~t~l~~A~~~-~~~~~~~~L 87 (126)
T 1n0r_A 63 AKDKNGRTPLHLAARN-GHLEVVKLL 87 (126)
T ss_dssp CCCTTSCCHHHHHHHT-TCHHHHHHH
T ss_pred ccCCCCCcHHHHHHHc-ChHHHHHHH
Confidence 4556677777777765 566676666
No 18
>2l6b_A NR1C; ankyrin, consensus, repeat protein, ising model, DE NOV; NMR {Escherichia coli}
Probab=98.21 E-value=1.3e-06 Score=77.01 Aligned_cols=86 Identities=24% Similarity=0.200 Sum_probs=65.1
Q ss_pred HHHHHHhccchHHHHHHHHHHHHhccccCCCccHHHHHHhhhchHHHHHHHcCChhHHHHHHhhcccCCCCCCCccccCC
Q 002028 848 FLLVFSVDRGCCALVKAILDILVEGNLSMDGLSRESLEMLWEIQLLNRAVKMKCRRMVDLLIHYSLTSSNDTPQKYIFPP 927 (978)
Q Consensus 848 ~LL~FAverdWcAVvkkLLdiL~~g~v~~~~~s~~~~~~l~e~~LLH~AV~~~s~~mVelLL~~~~~~~~~~~~~y~F~p 927 (978)
..|-+|+..+-..+++.||.. +.+..... ..+.++||+||..++.+||++|+.+. .++
T Consensus 11 t~L~~A~~~~~~~~~~~Ll~~----g~~~~~~d------~~g~t~L~~A~~~~~~~~~~~Ll~~g------------~~~ 68 (115)
T 2l6b_A 11 TPLHNAAKNGHAEEVKKLLSK----GADVNARS------KDGNTPLHLAAKNGHAEIVKLLLAKG------------ADV 68 (115)
T ss_dssp CHHHHHHHHTCHHHHHHHTTT----TCCSSCCC------SSSCCTTHHHHTTTCHHHHHHHTTTT------------CCT
T ss_pred CHHHHHHHcCCHHHHHHHHHc----CCCCCCcC------CCCCCHHHHHHHcCcHHHHHHHHHcC------------CCC
Confidence 356677777777777777653 33333222 14789999999999999999999764 346
Q ss_pred CCCCCCCCchhhhhcccCChhHHHHHhhc
Q 002028 928 NLAGPGGITPLHLAACTSDSDDIIDALTN 956 (978)
Q Consensus 928 d~~GpsGlTPLHIAAs~~g~~~vldaLt~ 956 (978)
+..+..|+||||+|+.. +..++++.|.+
T Consensus 69 ~~~d~~g~tpl~~A~~~-~~~~~~~~Ll~ 96 (115)
T 2l6b_A 69 NARSKDGNTPEHLAKKN-GHHEIVKLLDA 96 (115)
T ss_dssp TCCCTTCCCTTHHHHTT-TCHHHHHHHHT
T ss_pred cccCCCCCCHHHHHHHC-CCHHHHHHHHH
Confidence 66788999999999988 78899999844
No 19
>3f6q_A Integrin-linked protein kinase; ILK, integrin-linked kinase, pinch, ankyrin repeat, ANK, IPP; 1.60A {Homo sapiens} PDB: 3ixe_A 2kbx_A
Probab=98.19 E-value=3.1e-06 Score=80.12 Aligned_cols=84 Identities=23% Similarity=0.291 Sum_probs=58.7
Q ss_pred HHHHHHhccchHHHHHHHHHHHHhccccCCCccHHHHHHhhhchHHHHHHHcCChhHHHHHHhhcccCCCCCCCccccCC
Q 002028 848 FLLVFSVDRGCCALVKAILDILVEGNLSMDGLSRESLEMLWEIQLLNRAVKMKCRRMVDLLIHYSLTSSNDTPQKYIFPP 927 (978)
Q Consensus 848 ~LL~FAverdWcAVvkkLLdiL~~g~v~~~~~s~~~~~~l~e~~LLH~AV~~~s~~mVelLL~~~~~~~~~~~~~y~F~p 927 (978)
..|.+|+..+...+++.||.. +.+...... .+.|+||+|++.++.++|++||.+. .++
T Consensus 41 t~L~~A~~~~~~~~v~~Ll~~----g~~~~~~~~------~g~t~L~~A~~~~~~~~v~~Ll~~g------------~~~ 98 (179)
T 3f6q_A 41 SPLHWACREGRSAVVEMLIMR----GARINVMNR------GDDTPLHLAASHGHRDIVQKLLQYK------------ADI 98 (179)
T ss_dssp CHHHHHHHTTCHHHHHHHHHT----TCCTTCCCT------TCCCHHHHHHHTTCHHHHHHHHHTT------------CCT
T ss_pred CHHHHHHHcCcHHHHHHHHHc----CCCCCCcCC------CCCCHHHHHHHcCCHHHHHHHHHcC------------CCC
Confidence 457788888888888887764 223222221 3678888888888888888888764 235
Q ss_pred CCCCCCCCchhhhhcccCChhHHHHHh
Q 002028 928 NLAGPGGITPLHLAACTSDSDDIIDAL 954 (978)
Q Consensus 928 d~~GpsGlTPLHIAAs~~g~~~vldaL 954 (978)
+..+..|.||||+|+.. +..++++.|
T Consensus 99 ~~~d~~g~t~L~~A~~~-~~~~~v~~L 124 (179)
T 3f6q_A 99 NAVNEHGNVPLHYACFW-GQDQVAEDL 124 (179)
T ss_dssp TCCCTTSCCHHHHHHHT-TCHHHHHHH
T ss_pred CccCCCCCCHHHHHHHc-CCHHHHHHH
Confidence 55667778888887776 666777777
No 20
>1d9s_A Cyclin-dependent kinase 4 inhibitor B; helix-turn-helix, ankyrin repeat, signaling protein; NMR {Mus musculus} SCOP: i.11.1.1
Probab=98.19 E-value=2.5e-06 Score=77.61 Aligned_cols=84 Identities=13% Similarity=0.065 Sum_probs=64.8
Q ss_pred HHHHHhccchHHHHHHHHHHHHhccccCCCccHHHHHHhh-hchHHHHHHHcCChhHHHHHHhhcccCCCCCCCccccCC
Q 002028 849 LLVFSVDRGCCALVKAILDILVEGNLSMDGLSRESLEMLW-EIQLLNRAVKMKCRRMVDLLIHYSLTSSNDTPQKYIFPP 927 (978)
Q Consensus 849 LL~FAverdWcAVvkkLLdiL~~g~v~~~~~s~~~~~~l~-e~~LLH~AV~~~s~~mVelLL~~~~~~~~~~~~~y~F~p 927 (978)
.|-+|+. +-..+++.||.. +.+...... . +.||||+|++.++.++|++|+.+. .++
T Consensus 48 ~L~~A~~-~~~~~v~~Ll~~----g~~~~~~~~------~~g~t~L~~A~~~~~~~~v~~Ll~~g------------a~~ 104 (136)
T 1d9s_A 48 PIQVMMM-GSAQVAELLLLH----GAEPNCADP------ATLTRPVHDAAREGFLDTLVVLHRAG------------ARL 104 (136)
T ss_dssp TTTTSTT-SCHHHHHHHHHH----TCCSSCCBT------TTTBCHHHHHHHHTCHHHHHHHHHTC------------CCC
T ss_pred HHHHHHc-CCHHHHHHHHHC----CCCCCCcCC------CCCCCHHHHHHHcCCHHHHHHHHHcC------------CCC
Confidence 4566777 888888888864 222222221 3 689999999999999999999874 346
Q ss_pred CCCCCCCCchhhhhcccCChhHHHHHhhc
Q 002028 928 NLAGPGGITPLHLAACTSDSDDIIDALTN 956 (978)
Q Consensus 928 d~~GpsGlTPLHIAAs~~g~~~vldaLt~ 956 (978)
+..+..|.||||+|+.. +..++++.|.+
T Consensus 105 ~~~d~~g~tpl~~A~~~-~~~~~~~~Ll~ 132 (136)
T 1d9s_A 105 DVCDAWGRLPVDLAEEQ-GHRDIARYLHA 132 (136)
T ss_dssp CCCSSSSSCHHHHHHHH-TCHHHHHHHHH
T ss_pred CccCCCCCCHHHHHHHc-CCHHHHHHHHH
Confidence 77788999999999987 78889998843
No 21
>1awc_B Protein (GA binding protein beta 1); complex (transcription regulation/DNA), DNA-binding, nuclear protein, ETS domain, ankyrin repeats; HET: DNA BRU CBR; 2.15A {Mus musculus} SCOP: d.211.1.1
Probab=98.19 E-value=3e-06 Score=78.19 Aligned_cols=85 Identities=18% Similarity=0.213 Sum_probs=62.9
Q ss_pred HHHHHHhccchHHHHHHHHHHHHhccccCCCccHHHHHHhhhchHHHHHHHcCChhHHHHHHhhcccCCCCCCCccccCC
Q 002028 848 FLLVFSVDRGCCALVKAILDILVEGNLSMDGLSRESLEMLWEIQLLNRAVKMKCRRMVDLLIHYSLTSSNDTPQKYIFPP 927 (978)
Q Consensus 848 ~LL~FAverdWcAVvkkLLdiL~~g~v~~~~~s~~~~~~l~e~~LLH~AV~~~s~~mVelLL~~~~~~~~~~~~~y~F~p 927 (978)
..|-+|+..+...+++.||.. +.+...... .+.|+||+|++.++.++|++|+.+. .++
T Consensus 36 t~L~~A~~~~~~~~v~~Ll~~----g~~~~~~~~------~g~t~L~~A~~~~~~~~v~~Ll~~g------------~~~ 93 (153)
T 1awc_B 36 SPLHLAAQYGHFSTTEVLLRA----GVSRDARTK------VDRTPLHMAASEGHANIVEVLLKHG------------ADV 93 (153)
T ss_dssp CHHHHHHHHTCHHHHHHHHTT----TCCTTCCCT------TCCCHHHHHHHHTCHHHHHHHHTTT------------CCT
T ss_pred CHHHHHHHcCCHHHHHHHHHc----CCCCCCCCC------CCCCHHHHHHHcChHHHHHHHHHcC------------CCC
Confidence 467788888888888887752 222222221 3679999999999999999999763 346
Q ss_pred CCCCCCCCchhhhhcccCChhHHHHHhh
Q 002028 928 NLAGPGGITPLHLAACTSDSDDIIDALT 955 (978)
Q Consensus 928 d~~GpsGlTPLHIAAs~~g~~~vldaLt 955 (978)
+..+..|.||||+|+.. +..+++..|.
T Consensus 94 ~~~~~~g~t~L~~A~~~-~~~~~v~~Ll 120 (153)
T 1awc_B 94 NAKDMLKMTALHWATEH-NHQEVVELLI 120 (153)
T ss_dssp TCCCTTSCCHHHHHHHT-TCHHHHHHHH
T ss_pred CCCCCCCCCHHHHHHHc-CCHHHHHHHH
Confidence 66678889999998886 7778888883
No 22
>1n0q_A 3ANK, 3 ankyrin repeats; structural protein; 1.26A {} SCOP: k.37.1.1
Probab=98.19 E-value=1.5e-06 Score=74.26 Aligned_cols=54 Identities=28% Similarity=0.290 Sum_probs=46.7
Q ss_pred hchHHHHHHHcCChhHHHHHHhhcccCCCCCCCccccCCCCCCCCCCchhhhhcccCChhHHHHHhh
Q 002028 889 EIQLLNRAVKMKCRRMVDLLIHYSLTSSNDTPQKYIFPPNLAGPGGITPLHLAACTSDSDDIIDALT 955 (978)
Q Consensus 889 e~~LLH~AV~~~s~~mVelLL~~~~~~~~~~~~~y~F~pd~~GpsGlTPLHIAAs~~g~~~vldaLt 955 (978)
+.|+||+|++.++.++|++|+... .+++..+..|+||||+|+.. +..+++..|.
T Consensus 2 g~t~L~~A~~~~~~~~v~~Ll~~g------------~~~n~~d~~g~t~L~~A~~~-~~~~~v~~Ll 55 (93)
T 1n0q_A 2 GRTPLHLAARNGHLEVVKLLLEAG------------ADVNAKDKNGRTPLHLAARN-GHLEVVKLLL 55 (93)
T ss_dssp -CCHHHHHHHHTCHHHHHHHHHTT------------CCTTCCCTTSCCHHHHHHHT-TCHHHHHHHH
T ss_pred CCcHHHHHHHcCCHHHHHHHHHcC------------CCCcccCCCCCCHHHHHHHc-CCHHHHHHHH
Confidence 579999999999999999999764 34677788999999999987 8889999883
No 23
>3twr_A Tankyrase-2; ankyrin repeat, protein-protein interaction, substrate recru poly(ADP-ribosyl)ation; HET: PE8; 1.55A {Homo sapiens} SCOP: d.211.1.0 PDB: 3tws_A* 3twt_A* 3twv_A* 3tww_A 3twx_A 3twq_A 3twu_A 2y0i_S*
Probab=98.18 E-value=4.5e-06 Score=77.58 Aligned_cols=86 Identities=22% Similarity=0.301 Sum_probs=67.2
Q ss_pred HHHHHHhccchHHHHHHHHHHHHhccccCCCccHHHHHHhhhchHHHHHHHcCChhHHHHHHhhcccCCCCCCCccccCC
Q 002028 848 FLLVFSVDRGCCALVKAILDILVEGNLSMDGLSRESLEMLWEIQLLNRAVKMKCRRMVDLLIHYSLTSSNDTPQKYIFPP 927 (978)
Q Consensus 848 ~LL~FAverdWcAVvkkLLdiL~~g~v~~~~~s~~~~~~l~e~~LLH~AV~~~s~~mVelLL~~~~~~~~~~~~~y~F~p 927 (978)
..|-+|+..+...+++.||.- +.+..... ..+.||||+|++.++.+||++|+.+. .++
T Consensus 77 t~L~~A~~~~~~~~v~~Ll~~----g~~~~~~~------~~g~t~L~~A~~~~~~~~v~~Ll~~g------------a~~ 134 (165)
T 3twr_A 77 VPLHNACSYGHYEVAELLVKH----GAVVNVAD------LWKFTPLHEAAAKGKYEICKLLLQHG------------ADP 134 (165)
T ss_dssp CHHHHHHHTTCHHHHHHHHHT----TCCTTCCC------TTCCCHHHHHHHTTCHHHHHHHHHTT------------CCT
T ss_pred CHHHHHHHcCcHHHHHHHHhC----CCCCCCcC------CCCCCHHHHHHHcCCHHHHHHHHHcC------------CCC
Confidence 467788888988888888763 22222222 14679999999999999999999874 457
Q ss_pred CCCCCCCCchhhhhcccCChhHHHHHhhcC
Q 002028 928 NLAGPGGITPLHLAACTSDSDDIIDALTND 957 (978)
Q Consensus 928 d~~GpsGlTPLHIAAs~~g~~~vldaLt~D 957 (978)
+..+..|.||||+|+. +..+|++.|...
T Consensus 135 ~~~~~~g~t~l~~a~~--~~~~i~~~L~~~ 162 (165)
T 3twr_A 135 TKKNRDGNTPLDLVKD--GDTDIQDLLRGD 162 (165)
T ss_dssp TCCCTTSCCTGGGSCT--TCHHHHHHHHTC
T ss_pred cccCCCCCChhHhHhc--CChHHHHHHhhc
Confidence 7789999999999765 777999999764
No 24
>1awc_B Protein (GA binding protein beta 1); complex (transcription regulation/DNA), DNA-binding, nuclear protein, ETS domain, ankyrin repeats; HET: DNA BRU CBR; 2.15A {Mus musculus} SCOP: d.211.1.1
Probab=98.17 E-value=2.9e-06 Score=78.26 Aligned_cols=85 Identities=18% Similarity=0.177 Sum_probs=67.8
Q ss_pred HHHHHHHhccchHHHHHHHHHHHHhccccCCCccHHHHHHhhhchHHHHHHHcCChhHHHHHHhhcccCCCCCCCccccC
Q 002028 847 KFLLVFSVDRGCCALVKAILDILVEGNLSMDGLSRESLEMLWEIQLLNRAVKMKCRRMVDLLIHYSLTSSNDTPQKYIFP 926 (978)
Q Consensus 847 k~LL~FAverdWcAVvkkLLdiL~~g~v~~~~~s~~~~~~l~e~~LLH~AV~~~s~~mVelLL~~~~~~~~~~~~~y~F~ 926 (978)
...|.+|+..+-..+++.||..-.. +..+ ..+.|+||+|++.++.++|++|+.+. .+
T Consensus 3 ~~~L~~A~~~g~~~~v~~Ll~~g~~--~~~~---------~~g~t~L~~A~~~~~~~~v~~Ll~~g------------~~ 59 (153)
T 1awc_B 3 GKKLLEAARAGQDDEVRILMANGAP--FTTD---------WLGTSPLHLAAQYGHFSTTEVLLRAG------------VS 59 (153)
T ss_dssp HHHHHHHHHHTCHHHHHHHHHHTCC--CCCC---------TTCCCHHHHHHHHTCHHHHHHHHTTT------------CC
T ss_pred cHHHHHHHHcCCHHHHHHHHHcCCC--CCcC---------CCCCCHHHHHHHcCCHHHHHHHHHcC------------CC
Confidence 4568889999999999999875321 1111 13779999999999999999999763 34
Q ss_pred CCCCCCCCCchhhhhcccCChhHHHHHhh
Q 002028 927 PNLAGPGGITPLHLAACTSDSDDIIDALT 955 (978)
Q Consensus 927 pd~~GpsGlTPLHIAAs~~g~~~vldaLt 955 (978)
++..+..|+||||+|+.. +..+++..|.
T Consensus 60 ~~~~~~~g~t~L~~A~~~-~~~~~v~~Ll 87 (153)
T 1awc_B 60 RDARTKVDRTPLHMAASE-GHANIVEVLL 87 (153)
T ss_dssp TTCCCTTCCCHHHHHHHH-TCHHHHHHHH
T ss_pred CCCCCCCCCCHHHHHHHc-ChHHHHHHHH
Confidence 667788999999999987 7888999983
No 25
>2vge_A RELA-associated inhibitor; iaspp, nucleus, apoptosis, repressor, cytoplasm, phosphorylation, P53 binding protein, ANK repeat, SH3 domain; 2.10A {Homo sapiens}
Probab=98.17 E-value=3.5e-06 Score=84.69 Aligned_cols=54 Identities=20% Similarity=0.141 Sum_probs=31.2
Q ss_pred HHHHHHhccchHHHHHHHHHHHHhccccCCCccHHHHHHhhhchHHHHHHHcCChhHHHHHHhh
Q 002028 848 FLLVFSVDRGCCALVKAILDILVEGNLSMDGLSRESLEMLWEIQLLNRAVKMKCRRMVDLLIHY 911 (978)
Q Consensus 848 ~LL~FAverdWcAVvkkLLdiL~~g~v~~~~~s~~~~~~l~e~~LLH~AV~~~s~~mVelLL~~ 911 (978)
.+|-+|+..+-..+++.||..- .+...... .+.|+||+||..++.+||++||.+
T Consensus 23 t~L~~A~~~g~~~~v~~Ll~~g----~~~~~~d~------~g~tpLh~A~~~g~~~~v~~Ll~~ 76 (229)
T 2vge_A 23 VLLLDAALTGELEVVQQAVKEM----NDPSQPNE------EGITALHNAICGANYSIVDFLITA 76 (229)
T ss_dssp HHHHHHHHHTCHHHHHHHHHHS----SCTTCCCT------TSCCHHHHHHHTTCHHHHHHHHHT
T ss_pred HHHHHHHHcCCHHHHHHHHhcC----CCCCCCCC------CCCCHHHHHHHcCCHHHHHHHHHC
Confidence 4566777777777777777531 12111111 245666666666666666666655
No 26
>3v31_A Ankyrin repeat family A protein 2; structural genomics consortium, SGC, ankra2, ANK repeat, Pro binding, HDAC4; 1.57A {Homo sapiens} PDB: 3v2x_A 3v2o_A 3so8_A
Probab=98.16 E-value=3.9e-06 Score=78.13 Aligned_cols=84 Identities=20% Similarity=0.158 Sum_probs=53.5
Q ss_pred HHHHHHhccchHHHHHHHHHHHHhccccCCCccHHHHHHhhhchHHHHHHHcCChhHHHHHHhhcccCCCCCCCccccCC
Q 002028 848 FLLVFSVDRGCCALVKAILDILVEGNLSMDGLSRESLEMLWEIQLLNRAVKMKCRRMVDLLIHYSLTSSNDTPQKYIFPP 927 (978)
Q Consensus 848 ~LL~FAverdWcAVvkkLLdiL~~g~v~~~~~s~~~~~~l~e~~LLH~AV~~~s~~mVelLL~~~~~~~~~~~~~y~F~p 927 (978)
..|-+|+..+...+++.||.. +.+..... -.+.++||+|++.++.+||++|+.+. .++
T Consensus 38 t~L~~A~~~~~~~~v~~Ll~~----g~~~~~~~------~~g~t~L~~A~~~~~~~~v~~Ll~~g------------~~~ 95 (167)
T 3v31_A 38 TPLMWAAAHGQIAVVEFLLQN----GADPQLLG------KGRESALSLACSKGYTDIVKMLLDCG------------VDV 95 (167)
T ss_dssp CHHHHHHHTTCHHHHHHHHHT----TCCTTCCC------TTCCCHHHHHHHHTCHHHHHHHHHHT------------CCT
T ss_pred CHHHHHHHCCCHHHHHHHHHc----CCCCCCcC------CCCCcHHHHHHHcCCHHHHHHHHHCC------------CCC
Confidence 356778888888888877764 12222111 13567788888888888888887663 234
Q ss_pred CCCCCCCCchhhhhcccCChhHHHHHh
Q 002028 928 NLAGPGGITPLHLAACTSDSDDIIDAL 954 (978)
Q Consensus 928 d~~GpsGlTPLHIAAs~~g~~~vldaL 954 (978)
+..+..|.||||+|+.. +..++++.|
T Consensus 96 ~~~~~~g~t~L~~A~~~-~~~~~v~~L 121 (167)
T 3v31_A 96 NEYDWNGGTPLLYAVHG-NHVKCVKML 121 (167)
T ss_dssp TCCCTTSCCHHHHHHHT-TCHHHHHHH
T ss_pred CcCCCCCCCHHHHHHHc-CCHHHHHHH
Confidence 45566677777777665 556666666
No 27
>3ui2_A Signal recognition particle 43 kDa protein, chlor; ankyrin repeat, chromodomain, aromatic CAGE, signal recognit particle, protein targeting; 3.18A {Arabidopsis thaliana} PDB: 1x3q_A 2hug_A
Probab=98.16 E-value=2.9e-06 Score=85.49 Aligned_cols=87 Identities=17% Similarity=0.218 Sum_probs=64.7
Q ss_pred HHHHHHHHHhccchHHHHHHHHHHHHhccccCCCccHHHHHHhhhchHHHHHHHcCChhHHHHHHhhcccCCCCCCCccc
Q 002028 845 RFKFLLVFSVDRGCCALVKAILDILVEGNLSMDGLSRESLEMLWEIQLLNRAVKMKCRRMVDLLIHYSLTSSNDTPQKYI 924 (978)
Q Consensus 845 RFk~LL~FAverdWcAVvkkLLdiL~~g~v~~~~~s~~~~~~l~e~~LLH~AV~~~s~~mVelLL~~~~~~~~~~~~~y~ 924 (978)
.-...|-+|+..+-..+++.||. . .+.+.... .+.||||+|+..++.++|++||.+.
T Consensus 44 ~g~t~L~~A~~~g~~~~v~~Ll~---~--~~~~~~d~------~g~t~L~~A~~~g~~~~v~~Ll~~g------------ 100 (244)
T 3ui2_A 44 EYETPWWTAARKADEQALSQLLE---D--RDVDAVDE------NGRTALLFVAGLGSDKCVRLLAEAG------------ 100 (244)
T ss_dssp HHHHHHHHHHTTTCHHHHHHTTT---T--CCTTCBCT------TSCBHHHHHHHHTCHHHHHHHHHTT------------
T ss_pred CCCCHHHHHHHcCCHHHHHHHHc---C--CCCCCcCC------CCCCHHHHHHHCCCHHHHHHHHHcC------------
Confidence 34567888888988888888887 2 22222221 3679999999999999999999774
Q ss_pred cCCCCCC-CCCCchhhhhcccCChhHHHHHhh
Q 002028 925 FPPNLAG-PGGITPLHLAACTSDSDDIIDALT 955 (978)
Q Consensus 925 F~pd~~G-psGlTPLHIAAs~~g~~~vldaLt 955 (978)
-+++..+ ..|+||||+||.. +..+++..|.
T Consensus 101 a~~~~~~~~~g~t~L~~A~~~-g~~~~v~~Ll 131 (244)
T 3ui2_A 101 ADLDHRDMRGGLTALHMAAGY-VRPEVVEALV 131 (244)
T ss_dssp CCTTCCCSSSCCCHHHHHHHT-TCHHHHHHHH
T ss_pred CCCCcCCCCCCCCHHHHHHHc-CCHHHHHHHH
Confidence 2355455 6799999999877 7788888883
No 28
>1ihb_A P18-INK4C(INK6), cyclin-dependent kinase 6 inhibitor; cell cycle inhibitor, ankyrin repeat, CDK 4/6 inhibitor; 1.95A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bu9_A 1g3n_B 1mx4_A 1mx2_A 1mx6_A
Probab=98.16 E-value=4.3e-06 Score=77.03 Aligned_cols=87 Identities=14% Similarity=0.122 Sum_probs=65.6
Q ss_pred HHHHHHhccchHHHHHHHHHHHHhccccCCCccHHHHHHhhhchHHHHHHHcCChhHHHHHHhhcccCCCCCCCccccCC
Q 002028 848 FLLVFSVDRGCCALVKAILDILVEGNLSMDGLSRESLEMLWEIQLLNRAVKMKCRRMVDLLIHYSLTSSNDTPQKYIFPP 927 (978)
Q Consensus 848 ~LL~FAverdWcAVvkkLLdiL~~g~v~~~~~s~~~~~~l~e~~LLH~AV~~~s~~mVelLL~~~~~~~~~~~~~y~F~p 927 (978)
..|-+|+.++...+++.||.. +.+...... .+.||||+|++.++.++|++|+.+.. -..
T Consensus 72 t~L~~A~~~~~~~~v~~Ll~~----g~~~~~~~~------~g~t~L~~A~~~~~~~~v~~Ll~~g~-----------~~~ 130 (162)
T 1ihb_A 72 AVIHDAARAGFLDTLQTLLEF----QADVNIEDN------EGNLPLHLAAKEGHLRVVEFLVKHTA-----------SNV 130 (162)
T ss_dssp CHHHHHHHHTCHHHHHHHHHT----TCCTTCCCT------TSCCHHHHHHHTTCHHHHHHHHHHSC-----------CCT
T ss_pred CHHHHHHHcCCHHHHHHHHHc----CCCCCCcCC------CCCCHHHHHHHcCCHHHHHHHHHccC-----------CCC
Confidence 457788888888888888763 233222221 47799999999999999999998752 113
Q ss_pred CCCCCCCCchhhhhcccCChhHHHHHhhc
Q 002028 928 NLAGPGGITPLHLAACTSDSDDIIDALTN 956 (978)
Q Consensus 928 d~~GpsGlTPLHIAAs~~g~~~vldaLt~ 956 (978)
+..+..|.||||+|+.. +..++++.|.+
T Consensus 131 ~~~~~~g~t~l~~A~~~-~~~~~~~~Ll~ 158 (162)
T 1ihb_A 131 GHRNHKGDTACDLARLY-GRNEVVSLMQA 158 (162)
T ss_dssp TCCCTTSCCHHHHHHHT-TCHHHHHHHHH
T ss_pred CCcCCCCCcHHHHHHHc-CCHHHHHHHHH
Confidence 46678899999999987 88889998854
No 29
>1d9s_A Cyclin-dependent kinase 4 inhibitor B; helix-turn-helix, ankyrin repeat, signaling protein; NMR {Mus musculus} SCOP: i.11.1.1
Probab=98.15 E-value=1.2e-06 Score=79.72 Aligned_cols=84 Identities=21% Similarity=0.242 Sum_probs=66.6
Q ss_pred HHHHHHhccchHHHHHHHHHHHHhccccCCCccHHHHHHhhhchHHHHHHHcCChhHHHHHHhhcccCCCCCCCccccCC
Q 002028 848 FLLVFSVDRGCCALVKAILDILVEGNLSMDGLSRESLEMLWEIQLLNRAVKMKCRRMVDLLIHYSLTSSNDTPQKYIFPP 927 (978)
Q Consensus 848 ~LL~FAverdWcAVvkkLLdiL~~g~v~~~~~s~~~~~~l~e~~LLH~AV~~~s~~mVelLL~~~~~~~~~~~~~y~F~p 927 (978)
..|-+|+..+...+++.||.. +.+..... ..+.|+||+|++ ++.+||++|+.+. .++
T Consensus 14 t~L~~A~~~~~~~~v~~Ll~~----g~~~~~~~------~~g~t~L~~A~~-~~~~~v~~Ll~~g------------~~~ 70 (136)
T 1d9s_A 14 AGLATAAARGQVETVRQLLEA----GADPNALN------RFGRRPIQVMMM-GSAQVAELLLLHG------------AEP 70 (136)
T ss_dssp CHHHHHHHTTCHHHHHHHHHT----TCCTTCCC------TTCCTTTTTSTT-SCHHHHHHHHHHT------------CCS
T ss_pred cHHHHHHHcCCHHHHHHHHHc----CCCcCCcC------CCCCCHHHHHHc-CCHHHHHHHHHCC------------CCC
Confidence 468889999999999998864 23323222 147899999999 9999999999874 346
Q ss_pred CCCCCC-CCchhhhhcccCChhHHHHHhh
Q 002028 928 NLAGPG-GITPLHLAACTSDSDDIIDALT 955 (978)
Q Consensus 928 d~~Gps-GlTPLHIAAs~~g~~~vldaLt 955 (978)
+..+.. |+||||+|+.. +..+++..|.
T Consensus 71 ~~~~~~~g~t~L~~A~~~-~~~~~v~~Ll 98 (136)
T 1d9s_A 71 NCADPATLTRPVHDAARE-GFLDTLVVLH 98 (136)
T ss_dssp SCCBTTTTBCHHHHHHHH-TCHHHHHHHH
T ss_pred CCcCCCCCCCHHHHHHHc-CCHHHHHHHH
Confidence 666777 99999999987 8889999983
No 30
>2rfm_A Putative ankyrin repeat protein TV1425; ANK repeat, protein binding; HET: BU2 GOL; 1.65A {Thermoplasma volcanium}
Probab=98.15 E-value=4.5e-06 Score=79.67 Aligned_cols=84 Identities=17% Similarity=0.162 Sum_probs=60.7
Q ss_pred HHHHHHhccchHHHHHHHHHHHHhccccCCCccHHHHHHhhhchHHHHHHHcCChhHHHHHHhhcccCCCCCCCccccCC
Q 002028 848 FLLVFSVDRGCCALVKAILDILVEGNLSMDGLSRESLEMLWEIQLLNRAVKMKCRRMVDLLIHYSLTSSNDTPQKYIFPP 927 (978)
Q Consensus 848 ~LL~FAverdWcAVvkkLLdiL~~g~v~~~~~s~~~~~~l~e~~LLH~AV~~~s~~mVelLL~~~~~~~~~~~~~y~F~p 927 (978)
..|-+|+..+...+++.||..- .+..... -.+.|+||+|++.++.++|++|+.+. .++
T Consensus 70 t~L~~A~~~~~~~~v~~Ll~~g----~~~~~~~------~~g~t~L~~A~~~~~~~~v~~Ll~~g------------~~~ 127 (192)
T 2rfm_A 70 TALIWAVKNNRLGIAEKLLSKG----SNVNTKD------FSGKTPLMWSIIFGYSEMSYFLLEHG------------ANV 127 (192)
T ss_dssp CHHHHHHHTTCHHHHHHHHHHT----CCTTCCC------TTSCCHHHHHHHHTCHHHHHHHHHTT------------CCS
T ss_pred cHHHHHHHcCCHHHHHHHHHCC----CCCCCCC------CCCCcHHHHHHHcCCHHHHHHHHHCC------------CCC
Confidence 4577888888888888888752 2222111 13678999999999999999998764 345
Q ss_pred CCCCCCCCchhhhhcccCChhHHHHHh
Q 002028 928 NLAGPGGITPLHLAACTSDSDDIIDAL 954 (978)
Q Consensus 928 d~~GpsGlTPLHIAAs~~g~~~vldaL 954 (978)
+..+..|.||||+|+.. +..+++..|
T Consensus 128 ~~~~~~g~t~L~~A~~~-~~~~~v~~L 153 (192)
T 2rfm_A 128 NDRNLEGETPLIVASKY-GRSEIVKKL 153 (192)
T ss_dssp SCCCTTCCCHHHHHHHH-TCHHHHHHH
T ss_pred CCCCCCCCCHHHHHHHc-CCHHHHHHH
Confidence 56677788888888876 666777777
No 31
>1bd8_A P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyrin motif; 1.80A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bi8_B 1ap7_A 1blx_B
Probab=98.14 E-value=4.2e-06 Score=76.87 Aligned_cols=83 Identities=17% Similarity=0.185 Sum_probs=55.0
Q ss_pred HHHHHhccchHHHHHHHHHHHHhccccCCCccHHHHHHhhhchHHHHHHHcCChhHHHHHHhhcccCCCCCCCccccCCC
Q 002028 849 LLVFSVDRGCCALVKAILDILVEGNLSMDGLSRESLEMLWEIQLLNRAVKMKCRRMVDLLIHYSLTSSNDTPQKYIFPPN 928 (978)
Q Consensus 849 LL~FAverdWcAVvkkLLdiL~~g~v~~~~~s~~~~~~l~e~~LLH~AV~~~s~~mVelLL~~~~~~~~~~~~~y~F~pd 928 (978)
.|-+ +..+...+++.||.. +.+...... .+.|+||+|++.++.++|++|+.+. .+++
T Consensus 39 ~L~~-~~~~~~~~v~~Ll~~----g~~~~~~~~------~g~t~L~~A~~~~~~~~v~~Ll~~g------------~~~~ 95 (156)
T 1bd8_A 39 ALQV-MMFGSTAIALELLKQ----GASPNVQDT------SGTSPVHDAARTGFLDTLKVLVEHG------------ADVN 95 (156)
T ss_dssp HHHH-SCTTCHHHHHHHHHT----TCCTTCCCT------TSCCHHHHHHHTTCHHHHHHHHHTT------------CCSC
T ss_pred HHHH-HHcCCHHHHHHHHHC----CCCCCCcCC------CCCCHHHHHHHcCcHHHHHHHHHcC------------CCCC
Confidence 3444 666777777777753 222222221 3678888888888888888888763 3355
Q ss_pred CCCCCCCchhhhhcccCChhHHHHHhh
Q 002028 929 LAGPGGITPLHLAACTSDSDDIIDALT 955 (978)
Q Consensus 929 ~~GpsGlTPLHIAAs~~g~~~vldaLt 955 (978)
..+..|.||||+|+.. +..+++..|.
T Consensus 96 ~~~~~g~t~L~~A~~~-~~~~~v~~Ll 121 (156)
T 1bd8_A 96 VPDGTGALPIHLAVQE-GHTAVVSFLA 121 (156)
T ss_dssp CCCTTSCCHHHHHHHH-TCHHHHHHHH
T ss_pred CcCCCCCcHHHHHHHh-ChHHHHHHHH
Confidence 5667788888888776 6677777774
No 32
>1oy3_D Transcription factor inhibitor I-kappa-B-beta; protein-protein complex, transcription factors, nuclear localization, DNA binding protein; 2.05A {Mus musculus} SCOP: d.211.1.1 PDB: 1k3z_D
Probab=98.14 E-value=4.4e-06 Score=82.88 Aligned_cols=85 Identities=20% Similarity=0.156 Sum_probs=67.3
Q ss_pred HHHHHHhccchHHHHHHHHHHHHhccccCCCccHHHHHHhhhchHHHHHHHcCChhHHHHHHhhcccCCCCCCCccccCC
Q 002028 848 FLLVFSVDRGCCALVKAILDILVEGNLSMDGLSRESLEMLWEIQLLNRAVKMKCRRMVDLLIHYSLTSSNDTPQKYIFPP 927 (978)
Q Consensus 848 ~LL~FAverdWcAVvkkLLdiL~~g~v~~~~~s~~~~~~l~e~~LLH~AV~~~s~~mVelLL~~~~~~~~~~~~~y~F~p 927 (978)
..|-+|+.++-..+++.||..- .+...... ..+.||||+||+.++.++|++||.+. .++
T Consensus 160 t~L~~A~~~g~~~~v~~Ll~~g----~~~~~~~~-----~~g~tpL~~A~~~~~~~~v~~Ll~~g------------ad~ 218 (282)
T 1oy3_D 160 TPLHVAVIHKDAEMVRLLRDAG----ADLNKPEP-----TCGRTPLHLAVEAQAASVLELLLKAG------------ADP 218 (282)
T ss_dssp CHHHHHHHTTCHHHHHHHHHHT----CCTTCCCT-----TTCCCHHHHHHHTTCHHHHHHHHHTT------------CCT
T ss_pred CHHHHHHHcCCHHHHHHHHHcC----CCCCCCCC-----CCCcCHHHHHHHcCCHHHHHHHHHcC------------CCC
Confidence 4577888889889999888742 22222211 12789999999999999999999874 457
Q ss_pred CCCCCCCCchhhhhcccCChhHHHHHh
Q 002028 928 NLAGPGGITPLHLAACTSDSDDIIDAL 954 (978)
Q Consensus 928 d~~GpsGlTPLHIAAs~~g~~~vldaL 954 (978)
+..+..|.||||+|+.. +..+|+..|
T Consensus 219 ~~~d~~g~tpL~~A~~~-~~~~~v~~L 244 (282)
T 1oy3_D 219 TARMYGGRTPLGSALLR-PNPILARLL 244 (282)
T ss_dssp TCCCTTSCCHHHHHHTS-SCHHHHHHH
T ss_pred cccccCCCCHHHHHHHc-CCcHHHHHH
Confidence 77889999999999987 888999999
No 33
>3v30_A DNA-binding protein rfxank; structural genomics consortium, SGC, rfxank, ANK repeat, Pro binding; 1.57A {Homo sapiens} PDB: 3uxg_A
Probab=98.14 E-value=5.5e-06 Score=77.49 Aligned_cols=84 Identities=21% Similarity=0.159 Sum_probs=45.6
Q ss_pred HHHHHHhccchHHHHHHHHHHHHhccccCCCccHHHHHHhhhchHHHHHHHcCChhHHHHHHhhcccCCCCCCCccccCC
Q 002028 848 FLLVFSVDRGCCALVKAILDILVEGNLSMDGLSRESLEMLWEIQLLNRAVKMKCRRMVDLLIHYSLTSSNDTPQKYIFPP 927 (978)
Q Consensus 848 ~LL~FAverdWcAVvkkLLdiL~~g~v~~~~~s~~~~~~l~e~~LLH~AV~~~s~~mVelLL~~~~~~~~~~~~~y~F~p 927 (978)
..|-+|+..+-..+++.||..- .+...... .+.++||+|++.++.+||++|+.+. .++
T Consensus 38 t~L~~A~~~~~~~~v~~Ll~~g----~~~~~~~~------~g~t~L~~A~~~~~~~~v~~Ll~~g------------~~~ 95 (172)
T 3v30_A 38 TPLIWASAFGEIETVRFLLEWG----ADPHILAK------ERESALSLASTGGYTDIVGLLLERD------------VDI 95 (172)
T ss_dssp CHHHHHHHTTCHHHHHHHHHHT----CCTTCCCT------TCCCHHHHHHHTTCHHHHHHHHTTT------------CCT
T ss_pred CHHHHHHHcCCHHHHHHHHHcC----CCchhhcc------cCCCHHHHHHHCCCHHHHHHHHHcC------------CCC
Confidence 3466677777777777777542 11111111 2456666666666666666666542 223
Q ss_pred CCCCCCCCchhhhhcccCChhHHHHHh
Q 002028 928 NLAGPGGITPLHLAACTSDSDDIIDAL 954 (978)
Q Consensus 928 d~~GpsGlTPLHIAAs~~g~~~vldaL 954 (978)
+..+..|.||||+|+.. +..++++.|
T Consensus 96 ~~~~~~g~t~L~~A~~~-~~~~~v~~L 121 (172)
T 3v30_A 96 NIYDWNGGTPLLYAVRG-NHVKCVEAL 121 (172)
T ss_dssp TCCCTTSCCHHHHHHHT-TCHHHHHHH
T ss_pred CCCCCCCCCHHHHHHHc-CCHHHHHHH
Confidence 44445555555555554 444555555
No 34
>2y1l_E Darpin-8.4; hydrolase-inhibitor complex, DEVD darpin, ankyrin repeat Pro ribosome display, apoptosis; 1.80A {Synthetic source} PDB: 3noc_D* 4dx5_D* 2j8s_D* 4dx6_D* 4dx7_D* 3nog_D* 1mj0_A 1svx_A 2qyj_A 2bkg_A 2p2c_P 2bkk_B* 2v5q_C 2xee_A 2xeh_A 3q9n_C* 3q9u_C*
Probab=98.13 E-value=5e-06 Score=78.16 Aligned_cols=84 Identities=23% Similarity=0.275 Sum_probs=61.5
Q ss_pred HHHHHHhccchHHHHHHHHHHHHhccccCCCccHHHHHHhhhchHHHHHHHcCChhHHHHHHhhcccCCCCCCCccccCC
Q 002028 848 FLLVFSVDRGCCALVKAILDILVEGNLSMDGLSRESLEMLWEIQLLNRAVKMKCRRMVDLLIHYSLTSSNDTPQKYIFPP 927 (978)
Q Consensus 848 ~LL~FAverdWcAVvkkLLdiL~~g~v~~~~~s~~~~~~l~e~~LLH~AV~~~s~~mVelLL~~~~~~~~~~~~~y~F~p 927 (978)
..|-+|+..+...+++.||.. +.+...... .+.++||+||..++.+||++|+.+. .++
T Consensus 49 t~L~~A~~~~~~~~v~~Ll~~----g~~~~~~~~------~g~t~L~~A~~~~~~~~~~~Ll~~g------------~~~ 106 (169)
T 2y1l_E 49 TPLHLAAFNGHLEIVEVLLKN----GADVNAVDH------AGMTPLRLAALFGHLEIVEVLLKNG------------ADV 106 (169)
T ss_dssp CHHHHHHHTTCHHHHHHHHHT----TCCTTCCCT------TSCCHHHHHHHTTCHHHHHHHHHTT------------CCT
T ss_pred CHHHHHHHcCCHHHHHHHHHc----CCCCCccCC------CCCCHHHHHHHcCCHHHHHHHHHcC------------CCC
Confidence 467788888888888888863 222222221 3678999999999999999999764 235
Q ss_pred CCCCCCCCchhhhhcccCChhHHHHHh
Q 002028 928 NLAGPGGITPLHLAACTSDSDDIIDAL 954 (978)
Q Consensus 928 d~~GpsGlTPLHIAAs~~g~~~vldaL 954 (978)
+..+..|.||||+|+.. +..+++..|
T Consensus 107 ~~~~~~g~t~L~~A~~~-~~~~~v~~L 132 (169)
T 2y1l_E 107 NANDMEGHTPLHLAAMF-GHLEIVEVL 132 (169)
T ss_dssp TCCCTTSCCHHHHHHHT-TCHHHHHHH
T ss_pred CCCCCCCCCHHHHHHHc-CCHHHHHHH
Confidence 55677788888888876 777788877
No 35
>3f6q_A Integrin-linked protein kinase; ILK, integrin-linked kinase, pinch, ankyrin repeat, ANK, IPP; 1.60A {Homo sapiens} PDB: 3ixe_A 2kbx_A
Probab=98.13 E-value=5.1e-06 Score=78.61 Aligned_cols=85 Identities=25% Similarity=0.253 Sum_probs=66.2
Q ss_pred HHHHHhccchHHHHHHHHHHHHhccccCCCccHHHHHHhhhchHHHHHHHcCChhHHHHHHhhcccCCCCCCCccccCCC
Q 002028 849 LLVFSVDRGCCALVKAILDILVEGNLSMDGLSRESLEMLWEIQLLNRAVKMKCRRMVDLLIHYSLTSSNDTPQKYIFPPN 928 (978)
Q Consensus 849 LL~FAverdWcAVvkkLLdiL~~g~v~~~~~s~~~~~~l~e~~LLH~AV~~~s~~mVelLL~~~~~~~~~~~~~y~F~pd 928 (978)
-|-.|+..+-..+++.||.. +..+..... ..+.|+||+|++.++.++|++|+... .+++
T Consensus 8 ~l~~A~~~g~~~~v~~ll~~---~~~~~~~~~------~~g~t~L~~A~~~~~~~~v~~Ll~~g------------~~~~ 66 (179)
T 3f6q_A 8 DIFTQCREGNAVAVRLWLDN---TENDLNQGD------DHGFSPLHWACREGRSAVVEMLIMRG------------ARIN 66 (179)
T ss_dssp CHHHHHHHTCHHHHHHHHHC---TTSCTTCCC------TTSCCHHHHHHHTTCHHHHHHHHHTT------------CCTT
T ss_pred HHHHHHHcCCHHHHHHHHhc---CcccccccC------CCCCCHHHHHHHcCcHHHHHHHHHcC------------CCCC
Confidence 45678888889999988863 222222222 14789999999999999999999774 4567
Q ss_pred CCCCCCCchhhhhcccCChhHHHHHhh
Q 002028 929 LAGPGGITPLHLAACTSDSDDIIDALT 955 (978)
Q Consensus 929 ~~GpsGlTPLHIAAs~~g~~~vldaLt 955 (978)
..+..|.||||+|+.. +..+++..|.
T Consensus 67 ~~~~~g~t~L~~A~~~-~~~~~v~~Ll 92 (179)
T 3f6q_A 67 VMNRGDDTPLHLAASH-GHRDIVQKLL 92 (179)
T ss_dssp CCCTTCCCHHHHHHHT-TCHHHHHHHH
T ss_pred CcCCCCCCHHHHHHHc-CCHHHHHHHH
Confidence 7788999999999988 7888999883
No 36
>3v31_A Ankyrin repeat family A protein 2; structural genomics consortium, SGC, ankra2, ANK repeat, Pro binding, HDAC4; 1.57A {Homo sapiens} PDB: 3v2x_A 3v2o_A 3so8_A
Probab=98.13 E-value=5e-06 Score=77.42 Aligned_cols=86 Identities=17% Similarity=0.251 Sum_probs=68.0
Q ss_pred HHHHHHhccchHHHHHHHHHHHHhccccCCCccHHHHHHhhhchHHHHHHHcCChhHHHHHHhhcccCCCCCCCccccCC
Q 002028 848 FLLVFSVDRGCCALVKAILDILVEGNLSMDGLSRESLEMLWEIQLLNRAVKMKCRRMVDLLIHYSLTSSNDTPQKYIFPP 927 (978)
Q Consensus 848 ~LL~FAverdWcAVvkkLLdiL~~g~v~~~~~s~~~~~~l~e~~LLH~AV~~~s~~mVelLL~~~~~~~~~~~~~y~F~p 927 (978)
..|-+|+.++...+++.||.. +.+..... ..+.|+||+|++.++.+||++|+.+. .++
T Consensus 71 t~L~~A~~~~~~~~v~~Ll~~----g~~~~~~~------~~g~t~L~~A~~~~~~~~v~~Ll~~g------------~~~ 128 (167)
T 3v31_A 71 SALSLACSKGYTDIVKMLLDC----GVDVNEYD------WNGGTPLLYAVHGNHVKCVKMLLESG------------ADP 128 (167)
T ss_dssp CHHHHHHHHTCHHHHHHHHHH----TCCTTCCC------TTSCCHHHHHHHTTCHHHHHHHHHTT------------CCT
T ss_pred cHHHHHHHcCCHHHHHHHHHC----CCCCCcCC------CCCCCHHHHHHHcCCHHHHHHHHHcC------------CCC
Confidence 457788888989999888875 22222222 14789999999999999999999864 456
Q ss_pred CCCCCCCCchhhhhcccCChhHHHHHhhc
Q 002028 928 NLAGPGGITPLHLAACTSDSDDIIDALTN 956 (978)
Q Consensus 928 d~~GpsGlTPLHIAAs~~g~~~vldaLt~ 956 (978)
+..+..|.||||+|+.. +..++++.|.+
T Consensus 129 ~~~~~~g~t~l~~A~~~-~~~~~~~~L~~ 156 (167)
T 3v31_A 129 TIETDSGYNSMDLAVAL-GYRSVQQVIES 156 (167)
T ss_dssp TCCCTTSCCHHHHHHHH-TCHHHHHHHHH
T ss_pred CCcCCCCCCHHHHHHHc-CcHHHHHHHHH
Confidence 77789999999999988 88889998844
No 37
>2dzn_A Probable 26S proteasome regulatory subunit P28; ankyrin repeats, A-helical domain, structural genomics, NPPSFA; 2.20A {Saccharomyces cerevisiae} SCOP: d.211.1.1 PDB: 2dzo_A 1ixv_A 1wg0_A
Probab=98.12 E-value=4.6e-06 Score=80.59 Aligned_cols=86 Identities=19% Similarity=0.205 Sum_probs=63.8
Q ss_pred HHHHHHhccchHHHHHHHHHHHHhccccCCCccHHHHHHhhhchHHHHHHHcCChhHHHHHHhhcccCCCCCCCccccCC
Q 002028 848 FLLVFSVDRGCCALVKAILDILVEGNLSMDGLSRESLEMLWEIQLLNRAVKMKCRRMVDLLIHYSLTSSNDTPQKYIFPP 927 (978)
Q Consensus 848 ~LL~FAverdWcAVvkkLLdiL~~g~v~~~~~s~~~~~~l~e~~LLH~AV~~~s~~mVelLL~~~~~~~~~~~~~y~F~p 927 (978)
..|.+|+..+...+++.||.. +.+...... .+.||||+|++.++.++|++|+.+.+ .++
T Consensus 109 t~L~~A~~~~~~~~~~~Ll~~----g~~~~~~~~------~g~t~L~~A~~~~~~~~v~~Ll~~g~-----------~~~ 167 (228)
T 2dzn_A 109 TCLHLAVGKKWFEVSQFLIEN----GASVRIKDK------FNQIPLHRAASVGSLKLIELLCGLGK-----------SAV 167 (228)
T ss_dssp CHHHHHHHTTCHHHHHHHHHT----TCCSCCCCT------TSCCHHHHHHHTTCHHHHHHHHTTTC-----------CCS
T ss_pred CHHHHHHHcCCHhHHHHHHHc----CCCccccCC------CCCCHHHHHHHcCCHHHHHHHHhcCc-----------ccc
Confidence 356677778887777777753 223222221 36799999999999999999997741 346
Q ss_pred CCCCCCCCchhhhhcccCChhHHHHHhh
Q 002028 928 NLAGPGGITPLHLAACTSDSDDIIDALT 955 (978)
Q Consensus 928 d~~GpsGlTPLHIAAs~~g~~~vldaLt 955 (978)
+..+..|+||||+|+.. +..+++..|.
T Consensus 168 ~~~d~~g~t~L~~A~~~-~~~~~v~~Ll 194 (228)
T 2dzn_A 168 NWQDKQGWTPLFHALAE-GHGDAAVLLV 194 (228)
T ss_dssp CCCCTTSCCHHHHHHHT-TCHHHHHHHH
T ss_pred cCcCCCCCCHHHHHHHc-CCHHHHHHHH
Confidence 66788999999999987 7778888885
No 38
>1ihb_A P18-INK4C(INK6), cyclin-dependent kinase 6 inhibitor; cell cycle inhibitor, ankyrin repeat, CDK 4/6 inhibitor; 1.95A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bu9_A 1g3n_B 1mx4_A 1mx2_A 1mx6_A
Probab=98.12 E-value=4.4e-06 Score=76.98 Aligned_cols=83 Identities=18% Similarity=0.167 Sum_probs=64.3
Q ss_pred HHHHHHhccchHHHHHHHHHHHHhccccCCCccHHHHHHhhhchHHHHHHHcCChhHHHHHHhhcccCCCCCCCccccCC
Q 002028 848 FLLVFSVDRGCCALVKAILDILVEGNLSMDGLSRESLEMLWEIQLLNRAVKMKCRRMVDLLIHYSLTSSNDTPQKYIFPP 927 (978)
Q Consensus 848 ~LL~FAverdWcAVvkkLLdiL~~g~v~~~~~s~~~~~~l~e~~LLH~AV~~~s~~mVelLL~~~~~~~~~~~~~y~F~p 927 (978)
..|-+|+. +-..+++.||.. +.+..... ..+.|+||+|++.++.++|++|+.+. .++
T Consensus 40 t~L~~A~~-~~~~~v~~Ll~~----g~~~~~~~------~~g~t~L~~A~~~~~~~~v~~Ll~~g------------~~~ 96 (162)
T 1ihb_A 40 TALQVMKL-GNPEIARRLLLR----GANPDLKD------RTGFAVIHDAARAGFLDTLQTLLEFQ------------ADV 96 (162)
T ss_dssp CHHHHCCS-SCHHHHHHHHHT----TCCTTCCC------TTSCCHHHHHHHHTCHHHHHHHHHTT------------CCT
T ss_pred cHHHHHHc-CcHHHHHHHHHc----CCCCCCCC------CCCCCHHHHHHHcCCHHHHHHHHHcC------------CCC
Confidence 34566777 888888888864 22222222 14689999999999999999999874 346
Q ss_pred CCCCCCCCchhhhhcccCChhHHHHHh
Q 002028 928 NLAGPGGITPLHLAACTSDSDDIIDAL 954 (978)
Q Consensus 928 d~~GpsGlTPLHIAAs~~g~~~vldaL 954 (978)
+..+..|.||||+|+.. +..+++..|
T Consensus 97 ~~~~~~g~t~L~~A~~~-~~~~~v~~L 122 (162)
T 1ihb_A 97 NIEDNEGNLPLHLAAKE-GHLRVVEFL 122 (162)
T ss_dssp TCCCTTSCCHHHHHHHT-TCHHHHHHH
T ss_pred CCcCCCCCCHHHHHHHc-CCHHHHHHH
Confidence 67788999999999987 788999988
No 39
>4b93_B Ankyrin repeat domain-containing protein 27; endocytosis, exocytosis, snare; 2.00A {Homo sapiens}
Probab=98.12 E-value=3.1e-06 Score=87.14 Aligned_cols=82 Identities=21% Similarity=0.201 Sum_probs=63.4
Q ss_pred HHHHHhccchHHHHHHHHHHHHhccccCCCccHHHHHHhhhchHHHHHHHcCChhHHHHHHhhcccCCCCCCCccccCCC
Q 002028 849 LLVFSVDRGCCALVKAILDILVEGNLSMDGLSRESLEMLWEIQLLNRAVKMKCRRMVDLLIHYSLTSSNDTPQKYIFPPN 928 (978)
Q Consensus 849 LL~FAverdWcAVvkkLLdiL~~g~v~~~~~s~~~~~~l~e~~LLH~AV~~~s~~mVelLL~~~~~~~~~~~~~y~F~pd 928 (978)
.|-+|+..+...+++.||.- +.+..... -.+.||||+||+.++.+||++||.+. -+++
T Consensus 155 pL~~A~~~g~~~~v~~Ll~~----gadvn~~~------~~g~t~Lh~A~~~g~~~~v~~Ll~~G------------ad~~ 212 (269)
T 4b93_B 155 PLIYACSGGHHELVALLLQH----GASINASN------NKGNTALHEAVIEKHVFVVELLLLHG------------ASVQ 212 (269)
T ss_dssp HHHHHHHTTCGGGHHHHHHT----TCCTTCBC------TTSCBHHHHHHHTTCHHHHHHHHHTT------------CCSC
T ss_pred HHHHHHHCCCHHHHHHHHHC----CCCCCccc------cCCCcHHHHHHHcCCHHHHHHHHHCC------------CCCC
Confidence 47789999999999988863 33333222 24789999999999999999999874 3577
Q ss_pred CCCCCCCchhhhhcccCChhHHHHHhh
Q 002028 929 LAGPGGITPLHLAACTSDSDDIIDALT 955 (978)
Q Consensus 929 ~~GpsGlTPLHIAAs~~g~~~vldaLt 955 (978)
+.+..|+||||+|+. .++|+++|.
T Consensus 213 ~~d~~G~TpL~~A~~---~~~i~~lL~ 236 (269)
T 4b93_B 213 VLNKRQRTAVDCAEQ---NSKIMELLQ 236 (269)
T ss_dssp CCCTTSCCSGGGSCT---TCHHHHHTT
T ss_pred CcCCCCCCHHHHHHh---CCcHHHHHH
Confidence 889999999999974 345777773
No 40
>4b93_B Ankyrin repeat domain-containing protein 27; endocytosis, exocytosis, snare; 2.00A {Homo sapiens}
Probab=98.12 E-value=3.3e-06 Score=87.03 Aligned_cols=84 Identities=24% Similarity=0.207 Sum_probs=65.6
Q ss_pred HHHHHhccchHHHHHHHHHHHHhccccCCCccHHHHHHhhhchHHHHHHHcCChhHHHHHHhhcccCCCCCCCccccCCC
Q 002028 849 LLVFSVDRGCCALVKAILDILVEGNLSMDGLSRESLEMLWEIQLLNRAVKMKCRRMVDLLIHYSLTSSNDTPQKYIFPPN 928 (978)
Q Consensus 849 LL~FAverdWcAVvkkLLdiL~~g~v~~~~~s~~~~~~l~e~~LLH~AV~~~s~~mVelLL~~~~~~~~~~~~~y~F~pd 928 (978)
.+.+|+..+...+++.||.. +.+..... ..+.||||+||+.++.++|++||.+. -+++
T Consensus 122 ~l~~a~~~~~~~~~~~Ll~~----g~~~n~~d------~~g~TpL~~A~~~g~~~~v~~Ll~~g------------advn 179 (269)
T 4b93_B 122 PLHLACQQGHFQVVKCLLDS----NAKPNKKD------LSGNTPLIYACSGGHHELVALLLQHG------------ASIN 179 (269)
T ss_dssp HHHHHHHHTCHHHHHHHHHT----TCCSCCCC------TTCCCHHHHHHHTTCGGGHHHHHHTT------------CCTT
T ss_pred ccccccccChHHHHHHHHHC----CCCCCCCC------CCCCCHHHHHHHCCCHHHHHHHHHCC------------CCCC
Confidence 45567777778888877753 33333332 24789999999999999999999874 3577
Q ss_pred CCCCCCCchhhhhcccCChhHHHHHhh
Q 002028 929 LAGPGGITPLHLAACTSDSDDIIDALT 955 (978)
Q Consensus 929 ~~GpsGlTPLHIAAs~~g~~~vldaLt 955 (978)
..+..|+||||+||.. |..+|+.+|.
T Consensus 180 ~~~~~g~t~Lh~A~~~-g~~~~v~~Ll 205 (269)
T 4b93_B 180 ASNNKGNTALHEAVIE-KHVFVVELLL 205 (269)
T ss_dssp CBCTTSCBHHHHHHHT-TCHHHHHHHH
T ss_pred ccccCCCcHHHHHHHc-CCHHHHHHHH
Confidence 7789999999999987 8889999993
No 41
>1oy3_D Transcription factor inhibitor I-kappa-B-beta; protein-protein complex, transcription factors, nuclear localization, DNA binding protein; 2.05A {Mus musculus} SCOP: d.211.1.1 PDB: 1k3z_D
Probab=98.11 E-value=6.6e-06 Score=81.59 Aligned_cols=88 Identities=19% Similarity=0.111 Sum_probs=68.7
Q ss_pred HHHHHHhccchHHHHHHHHHHHHhcc-ccCCCccHHHHHHhhhchHHHHHHHcCChhHHHHHHhhcccCCCCCCCccccC
Q 002028 848 FLLVFSVDRGCCALVKAILDILVEGN-LSMDGLSRESLEMLWEIQLLNRAVKMKCRRMVDLLIHYSLTSSNDTPQKYIFP 926 (978)
Q Consensus 848 ~LL~FAverdWcAVvkkLLdiL~~g~-v~~~~~s~~~~~~l~e~~LLH~AV~~~s~~mVelLL~~~~~~~~~~~~~y~F~ 926 (978)
..|-+|+..+-..+++.||..-.... +.. .. -.+.||||+||+.++.+||++||.+. .+
T Consensus 11 t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~--~~------~~g~t~L~~A~~~g~~~~v~~Ll~~g------------a~ 70 (282)
T 1oy3_D 11 TALHLAVIHQHEPFLDFLLGFSAGHEYLDL--QN------DLGQTALHLAAILGEASTVEKLYAAG------------AG 70 (282)
T ss_dssp CHHHHHHHTTCHHHHHHHHHHHTTSGGGGC--CC------TTSCCHHHHHHHHTCHHHHHHHHHTT------------CC
T ss_pred cHHHHHHHcCCHHHHHHHHhcCCCcccccc--cC------CCCCCHHHHHHHcCCHHHHHHHHHcC------------CC
Confidence 46788999999999999997543311 111 11 13689999999999999999999874 34
Q ss_pred CCCCCCCCCchhhhhcccCChhHHHHHhhc
Q 002028 927 PNLAGPGGITPLHLAACTSDSDDIIDALTN 956 (978)
Q Consensus 927 pd~~GpsGlTPLHIAAs~~g~~~vldaLt~ 956 (978)
++..+..|+||||+|+.. +..+++..|..
T Consensus 71 ~~~~~~~g~tpL~~A~~~-~~~~~v~~Ll~ 99 (282)
T 1oy3_D 71 VLVAERGGHTALHLACRV-RAHTCACVLLQ 99 (282)
T ss_dssp SSCCCTTSCCHHHHHTTT-TCHHHHHHHSS
T ss_pred CCCCCCCCCCHHHHHHHc-CCcchhHhhhc
Confidence 667788999999999987 88899999843
No 42
>3v30_A DNA-binding protein rfxank; structural genomics consortium, SGC, rfxank, ANK repeat, Pro binding; 1.57A {Homo sapiens} PDB: 3uxg_A
Probab=98.10 E-value=4.5e-06 Score=78.05 Aligned_cols=86 Identities=17% Similarity=0.191 Sum_probs=67.3
Q ss_pred HHHHHHhccchHHHHHHHHHHHHhccccCCCccHHHHHHhhhchHHHHHHHcCChhHHHHHHhhcccCCCCCCCccccCC
Q 002028 848 FLLVFSVDRGCCALVKAILDILVEGNLSMDGLSRESLEMLWEIQLLNRAVKMKCRRMVDLLIHYSLTSSNDTPQKYIFPP 927 (978)
Q Consensus 848 ~LL~FAverdWcAVvkkLLdiL~~g~v~~~~~s~~~~~~l~e~~LLH~AV~~~s~~mVelLL~~~~~~~~~~~~~y~F~p 927 (978)
..|-+|+.++-..+++.||.. +.+..... ..+.|+||+|++.++.+||++|+.+. .++
T Consensus 71 t~L~~A~~~~~~~~v~~Ll~~----g~~~~~~~------~~g~t~L~~A~~~~~~~~v~~Ll~~g------------a~~ 128 (172)
T 3v30_A 71 SALSLASTGGYTDIVGLLLER----DVDINIYD------WNGGTPLLYAVRGNHVKCVEALLARG------------ADL 128 (172)
T ss_dssp CHHHHHHHTTCHHHHHHHHTT----TCCTTCCC------TTSCCHHHHHHHTTCHHHHHHHHHTT------------CCT
T ss_pred CHHHHHHHCCCHHHHHHHHHc----CCCCCCCC------CCCCCHHHHHHHcCCHHHHHHHHHcC------------CCc
Confidence 457788888888888888753 33323222 14789999999999999999999874 346
Q ss_pred CCCCCCCCchhhhhcccCChhHHHHHhhc
Q 002028 928 NLAGPGGITPLHLAACTSDSDDIIDALTN 956 (978)
Q Consensus 928 d~~GpsGlTPLHIAAs~~g~~~vldaLt~ 956 (978)
+..+..|.||||+|+.. +..++++.|.+
T Consensus 129 ~~~~~~g~t~l~~A~~~-~~~~~~~~L~~ 156 (172)
T 3v30_A 129 TTEADSGYTPMDLAVAL-GYRKVQQVIEN 156 (172)
T ss_dssp TCCCTTSCCHHHHHHHH-TCHHHHHHHHH
T ss_pred cccCCCCCCHHHHHHHh-CcHHHHHHHHH
Confidence 67788999999999998 78899998843
No 43
>1dcq_A PYK2-associated protein beta; zinc-binding module, ankyrin repeats, metal binding protein; 2.10A {Mus musculus} SCOP: d.211.1.1 g.45.1.1
Probab=98.10 E-value=5.1e-06 Score=86.33 Aligned_cols=86 Identities=17% Similarity=0.166 Sum_probs=67.0
Q ss_pred HHHHHHhcc---chHHHHHHHHHHHHhccccCCCccHHHHHHhhhchHHHHHHHcCChhHHHHHHhhcccCCCCCCCccc
Q 002028 848 FLLVFSVDR---GCCALVKAILDILVEGNLSMDGLSRESLEMLWEIQLLNRAVKMKCRRMVDLLIHYSLTSSNDTPQKYI 924 (978)
Q Consensus 848 ~LL~FAver---dWcAVvkkLLdiL~~g~v~~~~~s~~~~~~l~e~~LLH~AV~~~s~~mVelLL~~~~~~~~~~~~~y~ 924 (978)
-.|-+|+.. +...+++.||.- +.+.+.... .+.||||+||..++.++|++||.+.
T Consensus 171 t~Lh~A~~~~~~~~~~~v~~Ll~~----ga~in~~d~------~g~TpLh~A~~~g~~~~v~~Ll~~g------------ 228 (278)
T 1dcq_A 171 TALHLAVRSVDRTSLHIVDFLVQN----SGNLDKQTG------KGSTALHYCCLTDNAECLKLLLRGK------------ 228 (278)
T ss_dssp BHHHHHHHHCCTTTHHHHHHHHHH----CSCTTCCCT------TCCCHHHHHHHTTCHHHHHHHHHTT------------
T ss_pred CcchHHHHhcccchHHHHHHHHHC----CCCccccCC------CCCCHHHHHHHcCCHHHHHHHHHcC------------
Confidence 456777777 777888887764 223332221 4789999999999999999999874
Q ss_pred cCCCCCCCCCCchhhhhcccCChhHHHHHhhc
Q 002028 925 FPPNLAGPGGITPLHLAACTSDSDDIIDALTN 956 (978)
Q Consensus 925 F~pd~~GpsGlTPLHIAAs~~g~~~vldaLt~ 956 (978)
-++++.+..|.||||+|+.. +..+++++|..
T Consensus 229 ad~~~~d~~g~tpL~~A~~~-~~~~~v~~Ll~ 259 (278)
T 1dcq_A 229 ASIEIANESGETPLDIAKRL-KHEHCEELLTQ 259 (278)
T ss_dssp CCTTCCCTTSCCHHHHHHHT-TCHHHHHHHHH
T ss_pred CCCCCccCCCCCHHHHHHHc-CCHHHHHHHHH
Confidence 34777889999999999987 88899999943
No 44
>1n0r_A 4ANK, 4 ankyrin repeats; structural protein; 1.50A {} SCOP: k.37.1.1
Probab=98.10 E-value=7.8e-06 Score=71.36 Aligned_cols=86 Identities=23% Similarity=0.271 Sum_probs=66.0
Q ss_pred HHHHHHhccchHHHHHHHHHHHHhccccCCCccHHHHHHhhhchHHHHHHHcCChhHHHHHHhhcccCCCCCCCccccCC
Q 002028 848 FLLVFSVDRGCCALVKAILDILVEGNLSMDGLSRESLEMLWEIQLLNRAVKMKCRRMVDLLIHYSLTSSNDTPQKYIFPP 927 (978)
Q Consensus 848 ~LL~FAverdWcAVvkkLLdiL~~g~v~~~~~s~~~~~~l~e~~LLH~AV~~~s~~mVelLL~~~~~~~~~~~~~y~F~p 927 (978)
..|.+|+..+-..+++.|+.. +.+...... .+.++||+|++.++.+||++|+.+. .++
T Consensus 37 t~L~~A~~~~~~~~~~~Ll~~----g~~~~~~~~------~g~t~l~~A~~~~~~~~~~~Ll~~g------------~~~ 94 (126)
T 1n0r_A 37 TPLHLAARNGHLEVVKLLLEA----GADVNAKDK------NGRTPLHLAARNGHLEVVKLLLEAG------------ADV 94 (126)
T ss_dssp CHHHHHHHHTCHHHHHHHHHT----TCCTTCCCT------TSCCHHHHHHHTTCHHHHHHHHHTT------------CCT
T ss_pred cHHHHHHHcCcHHHHHHHHHc----CCCCcccCC------CCCcHHHHHHHcChHHHHHHHHHcC------------CCC
Confidence 457788888888888877763 233222221 3679999999999999999999774 346
Q ss_pred CCCCCCCCchhhhhcccCChhHHHHHhhc
Q 002028 928 NLAGPGGITPLHLAACTSDSDDIIDALTN 956 (978)
Q Consensus 928 d~~GpsGlTPLHIAAs~~g~~~vldaLt~ 956 (978)
+..+..|.||||+|+.. +..++++.|.+
T Consensus 95 ~~~~~~g~t~l~~A~~~-~~~~~~~~Ll~ 122 (126)
T 1n0r_A 95 NAKDKNGRTPLHLAARN-GHLEVVKLLLE 122 (126)
T ss_dssp TCCCTTSCCHHHHHHHT-TCHHHHHHHHH
T ss_pred cccCCCCCCHHHHHHHc-CcHHHHHHHHH
Confidence 66788999999999987 78889988843
No 45
>3c5r_A BARD-1, BRCA1-associated ring domain protein 1; ankyrin repeat, helix, extended loop, four repeat, PR ANK repeat, disease mutation, metal-binding; 2.00A {Homo sapiens} SCOP: k.37.1.1
Probab=98.10 E-value=3.8e-06 Score=76.11 Aligned_cols=86 Identities=16% Similarity=0.155 Sum_probs=64.7
Q ss_pred HHHHHHhccchHHHHHHHHHHHHhccccCCCccHHHHHHhhhchHHHHHHHcCChhHHHHHHhhcccCCCCCCCccccCC
Q 002028 848 FLLVFSVDRGCCALVKAILDILVEGNLSMDGLSRESLEMLWEIQLLNRAVKMKCRRMVDLLIHYSLTSSNDTPQKYIFPP 927 (978)
Q Consensus 848 ~LL~FAverdWcAVvkkLLdiL~~g~v~~~~~s~~~~~~l~e~~LLH~AV~~~s~~mVelLL~~~~~~~~~~~~~y~F~p 927 (978)
..|-+|+.++-..+++.||.. +.+..... ..+.||||+|++.++.+||++|+.+. .++
T Consensus 45 t~L~~A~~~~~~~~~~~Ll~~----g~~~~~~~------~~g~t~L~~A~~~~~~~~v~~Ll~~g------------a~~ 102 (137)
T 3c5r_A 45 TPLHEACNHGHLKVVELLLQH----KALVNTTG------YQNDSPLHDAAKNGHVDIVKLLLSYG------------ASR 102 (137)
T ss_dssp CHHHHHHHTTCHHHHHHHHHT----TCCTTCCC------GGGCCHHHHHHHTTCHHHHHHHHHTT------------CCT
T ss_pred CHHHHHHHcCCHHHHHHHHHc----CCcccCcC------CCCCCHHHHHHHcCCHHHHHHHHHcC------------CCC
Confidence 457788888888888888763 22222222 14779999999999999999999874 356
Q ss_pred CCCCCCCCchhhhhcccCChhHHHHHhhc
Q 002028 928 NLAGPGGITPLHLAACTSDSDDIIDALTN 956 (978)
Q Consensus 928 d~~GpsGlTPLHIAAs~~g~~~vldaLt~ 956 (978)
+..+..|.||||+|+.. +..+++..|..
T Consensus 103 ~~~~~~g~tpl~~A~~~-~~~~~l~~l~~ 130 (137)
T 3c5r_A 103 NAVNIFGLRPVDYTDDE-SMKSLLLLPEK 130 (137)
T ss_dssp TCCCTTSCCGGGGCCCH-HHHHHHSCC--
T ss_pred CCCCCCCCCHHHHHhhc-cHHHHHhhccc
Confidence 77789999999999865 67777777644
No 46
>2etb_A Transient receptor potential cation channel subfamily V member 2; TRPV2, ankyrin repeat domain, transport protein; 1.65A {Rattus norvegicus} PDB: 2eta_A 2etc_A 2f37_A
Probab=98.10 E-value=5.1e-06 Score=82.56 Aligned_cols=108 Identities=22% Similarity=0.197 Sum_probs=66.1
Q ss_pred HHHHHHHhcc---chHHHHHHHHHHHHhccccCCCccHHHH-HHhhhchHHHHHHHcCChhHHHHHHhhcccCCCCCCCc
Q 002028 847 KFLLVFSVDR---GCCALVKAILDILVEGNLSMDGLSRESL-EMLWEIQLLNRAVKMKCRRMVDLLIHYSLTSSNDTPQK 922 (978)
Q Consensus 847 k~LL~FAver---dWcAVvkkLLdiL~~g~v~~~~~s~~~~-~~l~e~~LLH~AV~~~s~~mVelLL~~~~~~~~~~~~~ 922 (978)
+..|-+|+.. +-..+++.||..-..-+....-+....- .-..+.|+||+||+.++.+||++||.+...... ....
T Consensus 44 ~t~L~~A~~~~~~g~~~~v~~Ll~~g~~~~~~~~~~~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~-~~~~ 122 (256)
T 2etb_A 44 KTCLMKAVLNLQDGVNACIMPLLQIDKDSGNPKPLVNAQCTDEFYQGHSALHIAIEKRSLQCVKLLVENGADVHL-RACG 122 (256)
T ss_dssp BCHHHHHHHTCBTTBCTTHHHHHHHHHHTTCSSCGGGCCCCSTTTTTCCHHHHHHHTTCHHHHHHHHHTTCCTTC-CCCS
T ss_pred CCHHHHHHHccccchHHHHHHHHhcCCcccchhhhcccccccccccCCCHHHHHHHcCCHHHHHHHHHcCCCCCc-cccc
Confidence 3577888887 8888888888765542211000000000 001378999999999999999999987541100 0000
Q ss_pred cccCCCC--CCCCCCchhhhhcccCChhHHHHHhhc
Q 002028 923 YIFPPNL--AGPGGITPLHLAACTSDSDDIIDALTN 956 (978)
Q Consensus 923 y~F~pd~--~GpsGlTPLHIAAs~~g~~~vldaLt~ 956 (978)
-.|.++. .+.-|.||||+||.. +..++++.|.+
T Consensus 123 ~~~~~~~~~~~~~g~tpL~~A~~~-~~~~~v~~Ll~ 157 (256)
T 2etb_A 123 RFFQKHQGTCFYFGELPLSLAACT-KQWDVVTYLLE 157 (256)
T ss_dssp GGGSCCSSSCCCSCSSHHHHHHHT-TCHHHHHHHHH
T ss_pred ccccccccccccCCCCHHHHHHHc-CCHHHHHHHHh
Confidence 0122221 112399999999987 88899999955
No 47
>3jxi_A Vanilloid receptor-related osmotically activated protein; ankyrin repeats, ANK repeat, ION transport, ionic channel, R transmembrane, transport; 2.30A {Gallus gallus} PDB: 3jxj_A 4dx1_A 4dx2_A*
Probab=98.09 E-value=5.3e-06 Score=82.42 Aligned_cols=94 Identities=17% Similarity=0.178 Sum_probs=65.7
Q ss_pred HHHHHHhccchHHHHHHHHHHHHhccccCCCccHH--------HHHHhhhchHHHHHHHcCChhHHHHHHhhcccCCCCC
Q 002028 848 FLLVFSVDRGCCALVKAILDILVEGNLSMDGLSRE--------SLEMLWEIQLLNRAVKMKCRRMVDLLIHYSLTSSNDT 919 (978)
Q Consensus 848 ~LL~FAverdWcAVvkkLLdiL~~g~v~~~~~s~~--------~~~~l~e~~LLH~AV~~~s~~mVelLL~~~~~~~~~~ 919 (978)
-.|-+|+.++...+++.||.- +.+....... ......+.|+||+|++.++.+||++||...
T Consensus 95 t~L~~A~~~g~~~~v~~Ll~~----ga~~~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~------- 163 (260)
T 3jxi_A 95 TALHIAIERRCKHYVELLVEK----GADVHAQARGRFFQPKDEGGYFYFGELPLSLAACTNQPHIVHYLTENG------- 163 (260)
T ss_dssp CHHHHHHHTTCHHHHHHHHHT----TCCTTCCCEECCCSSSCCCCSCCSCSSHHHHHHHTTCHHHHHHHHHCS-------
T ss_pred CHHHHHHHcCCHHHHHHHHhC----CCCcCccccccccCcccccccccCCCCHHHHHHHcCCHHHHHHHHhcc-------
Confidence 467889999999999999873 2222211100 000013789999999999999999999721
Q ss_pred CCccccCCCCCCCCCCchhhhhcccCCh--------hHHHHHh
Q 002028 920 PQKYIFPPNLAGPGGITPLHLAACTSDS--------DDIIDAL 954 (978)
Q Consensus 920 ~~~y~F~pd~~GpsGlTPLHIAAs~~g~--------~~vldaL 954 (978)
.+..+++..+..|+||||+||..... .++++.|
T Consensus 164 --~~ga~~~~~d~~g~TpLh~A~~~~~~~~~~~~~~~~~v~~L 204 (260)
T 3jxi_A 164 --HKQADLRRQDSRGNTVLHALVAIADNTRENTKFVTKMYDLL 204 (260)
T ss_dssp --SCCCCTTCCCTTSCCHHHHHHHHCCSSHHHHHHHHHHHHHH
T ss_pred --ccCCCCcccCCCCCcHHHHHHHhccCchhHHHHHHHHHHHH
Confidence 01355777899999999999976432 4788877
No 48
>3jxi_A Vanilloid receptor-related osmotically activated protein; ankyrin repeats, ANK repeat, ION transport, ionic channel, R transmembrane, transport; 2.30A {Gallus gallus} PDB: 3jxj_A 4dx1_A 4dx2_A*
Probab=98.09 E-value=4.9e-06 Score=82.65 Aligned_cols=101 Identities=24% Similarity=0.304 Sum_probs=65.9
Q ss_pred HHHHHHh---ccchHHHHHHHHHHHHhccc-------cCCCccHHHHHHhhhchHHHHHHHcCChhHHHHHHhhcccCCC
Q 002028 848 FLLVFSV---DRGCCALVKAILDILVEGNL-------SMDGLSRESLEMLWEIQLLNRAVKMKCRRMVDLLIHYSLTSSN 917 (978)
Q Consensus 848 ~LL~FAv---erdWcAVvkkLLdiL~~g~v-------~~~~~s~~~~~~l~e~~LLH~AV~~~s~~mVelLL~~~~~~~~ 917 (978)
..|-+|+ ..+...+++.||..-..... ...... ..+.|+||+||..++.+||++||.+.....
T Consensus 48 t~L~~A~~~~~~g~~~~v~~Ll~~g~~~~~~~~~~~~~~~~~d------~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~- 120 (260)
T 3jxi_A 48 TCLPKALLNLSAGRNDTIPILLDIAEKTGNMREFINSPFRDVY------YRGQTALHIAIERRCKHYVELLVEKGADVH- 120 (260)
T ss_dssp CHHHHHHTSCBTTBCTHHHHHHHHHHHTTCHHHHHTCCBCCSS------EESBCHHHHHHHTTCHHHHHHHHHTTCCTT-
T ss_pred cHHHHHHHHhhcCCHHHHHHHHHhcccccchHhhhcccccccc------cCCCCHHHHHHHcCCHHHHHHHHhCCCCcC-
Confidence 4566666 77888888888886544110 000000 146799999999999999999998754110
Q ss_pred CCCCccccCCC---CCCCCCCchhhhhcccCChhHHHHHhhc
Q 002028 918 DTPQKYIFPPN---LAGPGGITPLHLAACTSDSDDIIDALTN 956 (978)
Q Consensus 918 ~~~~~y~F~pd---~~GpsGlTPLHIAAs~~g~~~vldaLt~ 956 (978)
.....-.|.++ .....|+||||+||.. +..+++..|.+
T Consensus 121 ~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~-g~~~~v~~Ll~ 161 (260)
T 3jxi_A 121 AQARGRFFQPKDEGGYFYFGELPLSLAACT-NQPHIVHYLTE 161 (260)
T ss_dssp CCCEECCCSSSCCCCSCCSCSSHHHHHHHT-TCHHHHHHHHH
T ss_pred ccccccccCcccccccccCCCCHHHHHHHc-CCHHHHHHHHh
Confidence 01111122222 1125799999999987 88899999955
No 49
>1s70_B 130 kDa myosin-binding subunit of smooth muscle myosin phophatase (M130), serine/threonine protein phosphatase PP1-beta (OR delta) catalytic subunit; myosin phosphatase; HET: PGE; 2.70A {Gallus gallus} SCOP: d.211.1.1
Probab=98.09 E-value=5.3e-06 Score=83.70 Aligned_cols=84 Identities=21% Similarity=0.192 Sum_probs=59.0
Q ss_pred HHHHHHhccchHHHHHHHHHHHHhccccCCCccHHHHHHhhhchHHHHHHHcCChhHHHHHHhhcccCCCCCCCccccCC
Q 002028 848 FLLVFSVDRGCCALVKAILDILVEGNLSMDGLSRESLEMLWEIQLLNRAVKMKCRRMVDLLIHYSLTSSNDTPQKYIFPP 927 (978)
Q Consensus 848 ~LL~FAverdWcAVvkkLLdiL~~g~v~~~~~s~~~~~~l~e~~LLH~AV~~~s~~mVelLL~~~~~~~~~~~~~y~F~p 927 (978)
.+|.+|+..+-..+++.||.- +.+...... .+.||||+||..++.++|++||.+. .++
T Consensus 42 t~l~~A~~~g~~~~v~~Ll~~----g~~~~~~~~------~g~t~L~~A~~~g~~~~v~~Ll~~g------------a~~ 99 (299)
T 1s70_B 42 AVFLAACSSGDTEEVLRLLER----GADINYANV------DGLTALHQACIDDNVDMVKFLVENG------------ANI 99 (299)
T ss_dssp HHHHHHHHHTCHHHHHHHHHH----CCCTTCBCT------TCCBHHHHHHHTTCHHHHHHHHHTT------------CCT
T ss_pred cHHHHHHHcCCHHHHHHHHHc----CCCCcccCC------CCCCHHHHHHHcCCHHHHHHHHHCC------------CCC
Confidence 577888888888888888863 222222221 3678888888888888888888763 335
Q ss_pred CCCCCCCCchhhhhcccCChhHHHHHh
Q 002028 928 NLAGPGGITPLHLAACTSDSDDIIDAL 954 (978)
Q Consensus 928 d~~GpsGlTPLHIAAs~~g~~~vldaL 954 (978)
+..+..|+||||+|+.. +..++++.|
T Consensus 100 ~~~~~~g~tpL~~A~~~-g~~~~v~~L 125 (299)
T 1s70_B 100 NQPDNEGWIPLHAAASC-GYLDIAEYL 125 (299)
T ss_dssp TCCCTTSCCHHHHHHHH-TCHHHHHHH
T ss_pred CCCCCCCCcHHHHHHHc-CCHHHHHHH
Confidence 55667777888877776 666777777
No 50
>2rfa_A Transient receptor potential cation channel subfa member 6; TRPV6, ankyrin reapeat, ANK RE calcium channel, calcium transport, calmodulin-binding; 1.70A {Mus musculus}
Probab=98.09 E-value=9.1e-06 Score=79.16 Aligned_cols=100 Identities=19% Similarity=0.159 Sum_probs=62.7
Q ss_pred HHHHHHhccchHHHHHHHHHHHHhccc-cCCCccHHHHHHhhhchHHHHHHHcCChhHHHHHHhhcccC-CCCCCCcccc
Q 002028 848 FLLVFSVDRGCCALVKAILDILVEGNL-SMDGLSRESLEMLWEIQLLNRAVKMKCRRMVDLLIHYSLTS-SNDTPQKYIF 925 (978)
Q Consensus 848 ~LL~FAverdWcAVvkkLLdiL~~g~v-~~~~~s~~~~~~l~e~~LLH~AV~~~s~~mVelLL~~~~~~-~~~~~~~y~F 925 (978)
..|-+|+..+-..+++.||..-..-.. ...... ..+.|+||+||+.++.+||++|+.+.... .......+.+
T Consensus 39 t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~------~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~~~~~ 112 (232)
T 2rfa_A 39 TALHIAALYDNLEAAMVLMEAAPELVFEPMTSEL------YEGQTALHIAVINQNVNLVRALLARGASVSARATGSVFHY 112 (232)
T ss_dssp CHHHHHHHTTCHHHHHHHHHHCGGGGGCCCCSTT------TTTCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCCSGGGSC
T ss_pred CHHHHHHHcCCHHHHHHHHHcCchhccccccccC------CCCcCHHHHHHHcCCHHHHHHHHhCCCCCCcccCCcceee
Confidence 467889999999999999985332100 001000 14789999999999999999999986521 1111122344
Q ss_pred CCCCCCCCCCchhhhhcccCChhHHHHHh
Q 002028 926 PPNLAGPGGITPLHLAACTSDSDDIIDAL 954 (978)
Q Consensus 926 ~pd~~GpsGlTPLHIAAs~~g~~~vldaL 954 (978)
.++..+..|.||||+||.. +..+++..|
T Consensus 113 ~~~~~~~~g~t~L~~A~~~-~~~~~v~~L 140 (232)
T 2rfa_A 113 RPHNLIYYGEHPLSFAACV-GSEEIVRLL 140 (232)
T ss_dssp CTTCSCCCCSSHHHHHHHH-TCHHHHHHH
T ss_pred cccccccCCCCHHHHHHHc-CCHHHHHHH
Confidence 4444445566666666655 555566655
No 51
>2etb_A Transient receptor potential cation channel subfamily V member 2; TRPV2, ankyrin repeat domain, transport protein; 1.65A {Rattus norvegicus} PDB: 2eta_A 2etc_A 2f37_A
Probab=98.08 E-value=4.8e-06 Score=82.73 Aligned_cols=96 Identities=16% Similarity=0.114 Sum_probs=67.2
Q ss_pred HHHHHHhccchHHHHHHHHHHHHhccccCCCccHH-HHH------HhhhchHHHHHHHcCChhHHHHHHhhcccCCCCCC
Q 002028 848 FLLVFSVDRGCCALVKAILDILVEGNLSMDGLSRE-SLE------MLWEIQLLNRAVKMKCRRMVDLLIHYSLTSSNDTP 920 (978)
Q Consensus 848 ~LL~FAverdWcAVvkkLLdiL~~g~v~~~~~s~~-~~~------~l~e~~LLH~AV~~~s~~mVelLL~~~~~~~~~~~ 920 (978)
..|-+|+.++...+++.||.. +.+....... .+. ...+.||||+||+.++.++|++||....
T Consensus 92 t~L~~A~~~g~~~~v~~Ll~~----ga~~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~~~------- 160 (256)
T 2etb_A 92 SALHIAIEKRSLQCVKLLVEN----GADVHLRACGRFFQKHQGTCFYFGELPLSLAACTKQWDVVTYLLENPH------- 160 (256)
T ss_dssp CHHHHHHHTTCHHHHHHHHHT----TCCTTCCCCSGGGSCCSSSCCCSCSSHHHHHHHTTCHHHHHHHHHCSS-------
T ss_pred CHHHHHHHcCCHHHHHHHHHc----CCCCCcccccccccccccccccCCCCHHHHHHHcCCHHHHHHHHhccc-------
Confidence 567889999999999988874 2222211110 000 0017899999999999999999998310
Q ss_pred CccccCCCCCCCCCCchhhhhccc-CChhH-------HHHHhhc
Q 002028 921 QKYIFPPNLAGPGGITPLHLAACT-SDSDD-------IIDALTN 956 (978)
Q Consensus 921 ~~y~F~pd~~GpsGlTPLHIAAs~-~g~~~-------vldaLt~ 956 (978)
+..+++..+..|+||||+||.. .+..+ |++.|..
T Consensus 161 --~ga~~n~~d~~g~TpLh~A~~~~~~~~~~~~~~~~iv~~Ll~ 202 (256)
T 2etb_A 161 --QPASLEATDSLGNTVLHALVMIADNSPENSALVIHMYDGLLQ 202 (256)
T ss_dssp --CCCCTTCCCTTSCCHHHHHHHHCCSCHHHHHHHHHHHHHHHH
T ss_pred --cCCCcCccCCCCCCHHHHHHHcccCCchhhHHHHHHHHHHHH
Confidence 1345777889999999999984 35666 8888843
No 52
>3aaa_C Myotrophin, protein V-1; actin capping protein, barbed END capping, inhibition, prote binding, actin capping, actin-binding, cytoskeleton, ANK RE; 2.20A {Homo sapiens} PDB: 1myo_A 2kxp_C 2myo_A
Probab=98.08 E-value=9.6e-06 Score=72.36 Aligned_cols=81 Identities=21% Similarity=0.223 Sum_probs=60.6
Q ss_pred HHHHHHhccchHHHHHHHHHHHHhccccCCCccHHHHHHhhhchHHHHHHHcCChhHHHHHHhhcccCCCCCCCccccCC
Q 002028 848 FLLVFSVDRGCCALVKAILDILVEGNLSMDGLSRESLEMLWEIQLLNRAVKMKCRRMVDLLIHYSLTSSNDTPQKYIFPP 927 (978)
Q Consensus 848 ~LL~FAverdWcAVvkkLLdiL~~g~v~~~~~s~~~~~~l~e~~LLH~AV~~~s~~mVelLL~~~~~~~~~~~~~y~F~p 927 (978)
..|-+|+.++-..+++.||.. +.+..... ..+.||||+|++.++.+||++|+.+. .++
T Consensus 42 t~L~~A~~~~~~~~v~~Ll~~----g~~~~~~d------~~g~tpL~~A~~~~~~~~v~~Ll~~g------------a~~ 99 (123)
T 3aaa_C 42 KPLHYAADCGQLEILEFLLLK----GADINAPD------KHHITPLLSAVYEGHVSCVKLLLSKG------------ADK 99 (123)
T ss_dssp CHHHHHHHTTCHHHHHHHHTT----TCCTTCCC------TTSCCHHHHHHHHTCHHHHHHHHHTT------------CCT
T ss_pred cHHHHHHHcCCHHHHHHHHHc----CCCCCcCC------CCCCCHHHHHHHcCCHHHHHHHHHcC------------CCC
Confidence 467788888988888887753 33333222 14789999999999999999999874 346
Q ss_pred CCCCCCCCchhhhhcccCChhHHHHHh
Q 002028 928 NLAGPGGITPLHLAACTSDSDDIIDAL 954 (978)
Q Consensus 928 d~~GpsGlTPLHIAAs~~g~~~vldaL 954 (978)
+..+..|+||||+|+. .++.++|
T Consensus 100 ~~~~~~g~t~l~~A~~----~~~~~ll 122 (123)
T 3aaa_C 100 TVKGPDGLTAFEATDN----QAIKALL 122 (123)
T ss_dssp TCCCTTSCCHHHHCCC----HHHHHHH
T ss_pred CCcCCCCCCHHHHhCC----HHHHHHh
Confidence 7778999999999943 3555544
No 53
>4hbd_A KN motif and ankyrin repeat domain-containing Pro; structural genomics consortium, SGC, protein binding; 1.72A {Homo sapiens}
Probab=98.08 E-value=5.3e-06 Score=85.10 Aligned_cols=55 Identities=22% Similarity=0.128 Sum_probs=46.5
Q ss_pred hchHHHHHHHcCChhHHHHHHhhcccCCCCCCCccccCCCCCCCCCCchhhhhcccCChhHHHHHhhc
Q 002028 889 EIQLLNRAVKMKCRRMVDLLIHYSLTSSNDTPQKYIFPPNLAGPGGITPLHLAACTSDSDDIIDALTN 956 (978)
Q Consensus 889 e~~LLH~AV~~~s~~mVelLL~~~~~~~~~~~~~y~F~pd~~GpsGlTPLHIAAs~~g~~~vldaLt~ 956 (978)
+.||||+||+.++.+||++||.+. .+++..+..|+||||+||.. |..+++..|..
T Consensus 183 g~tpLh~A~~~g~~~~v~~Ll~~g------------ad~n~~d~~G~TpLh~A~~~-g~~~iv~~Ll~ 237 (276)
T 4hbd_A 183 GQTALMLAVSHGRVDVVKALLACE------------ADVNVQDDDGSTALMCACEH-GHKEIAGLLLA 237 (276)
T ss_dssp CCCHHHHHHHTTCHHHHHHHHHTT------------CCTTCCCTTSCCHHHHHHHH-TCHHHHHHHHT
T ss_pred CCCHHHHHHHcCCHHHHHHHHhCC------------CCCCCCCCCCCCHHHHHHHC-CCHHHHHHHHh
Confidence 569999999999999999999874 34667788899999998887 77888888854
No 54
>2y1l_E Darpin-8.4; hydrolase-inhibitor complex, DEVD darpin, ankyrin repeat Pro ribosome display, apoptosis; 1.80A {Synthetic source} PDB: 3noc_D* 4dx5_D* 2j8s_D* 4dx6_D* 4dx7_D* 3nog_D* 1mj0_A 1svx_A 2qyj_A 2bkg_A 2p2c_P 2bkk_B* 2v5q_C 2xee_A 2xeh_A 3q9n_C* 3q9u_C*
Probab=98.07 E-value=7.8e-06 Score=76.84 Aligned_cols=86 Identities=20% Similarity=0.175 Sum_probs=68.8
Q ss_pred HHHHHHHhccchHHHHHHHHHHHHhccccCCCccHHHHHHhhhchHHHHHHHcCChhHHHHHHhhcccCCCCCCCccccC
Q 002028 847 KFLLVFSVDRGCCALVKAILDILVEGNLSMDGLSRESLEMLWEIQLLNRAVKMKCRRMVDLLIHYSLTSSNDTPQKYIFP 926 (978)
Q Consensus 847 k~LL~FAverdWcAVvkkLLdiL~~g~v~~~~~s~~~~~~l~e~~LLH~AV~~~s~~mVelLL~~~~~~~~~~~~~y~F~ 926 (978)
...|..|+..+-..+++.||.. +.+.+.... .+.++||+|++.++.+||++|+... .+
T Consensus 15 ~~~l~~A~~~g~~~~v~~Ll~~----g~~~~~~~~------~g~t~L~~A~~~~~~~~v~~Ll~~g------------~~ 72 (169)
T 2y1l_E 15 GKKLLEAARAGRDDEVRILMAN----GADVNAEDA------SGWTPLHLAAFNGHLEIVEVLLKNG------------AD 72 (169)
T ss_dssp HHHHHHHHHHTCHHHHHHHHHT----TCCTTCCCT------TSCCHHHHHHHTTCHHHHHHHHHTT------------CC
T ss_pred cchHHHHHHcCCHHHHHHHHHC----CCCCCCCCC------CCCCHHHHHHHcCCHHHHHHHHHcC------------CC
Confidence 4678899999999999998874 223232221 4789999999999999999999864 34
Q ss_pred CCCCCCCCCchhhhhcccCChhHHHHHhh
Q 002028 927 PNLAGPGGITPLHLAACTSDSDDIIDALT 955 (978)
Q Consensus 927 pd~~GpsGlTPLHIAAs~~g~~~vldaLt 955 (978)
++..+..|+||||+|+.. +..+++..|.
T Consensus 73 ~~~~~~~g~t~L~~A~~~-~~~~~~~~Ll 100 (169)
T 2y1l_E 73 VNAVDHAGMTPLRLAALF-GHLEIVEVLL 100 (169)
T ss_dssp TTCCCTTSCCHHHHHHHT-TCHHHHHHHH
T ss_pred CCccCCCCCCHHHHHHHc-CCHHHHHHHH
Confidence 666788999999999988 7888999883
No 55
>1k1a_A B-cell lymphoma 3-encoded protein; BCL-3, NF-kappab transcription factors, ikappab proteins; 1.86A {Homo sapiens} SCOP: d.211.1.1 PDB: 1k1b_A
Probab=98.05 E-value=3.9e-06 Score=81.56 Aligned_cols=87 Identities=18% Similarity=0.198 Sum_probs=47.9
Q ss_pred HHHHHhccchHHHHHHHHHHHHhccccCCCccHHHHHHhhhchHHHHHHHcCChhHHHHHHhhcccCCCCCCCccccCCC
Q 002028 849 LLVFSVDRGCCALVKAILDILVEGNLSMDGLSRESLEMLWEIQLLNRAVKMKCRRMVDLLIHYSLTSSNDTPQKYIFPPN 928 (978)
Q Consensus 849 LL~FAverdWcAVvkkLLdiL~~g~v~~~~~s~~~~~~l~e~~LLH~AV~~~s~~mVelLL~~~~~~~~~~~~~y~F~pd 928 (978)
.|.+|+.++...+++.||.. +.+..... ..+.|+||+|++.++.+||++|+.+. .+++
T Consensus 153 ~L~~A~~~~~~~~v~~Ll~~----g~~~~~~~------~~g~t~L~~A~~~~~~~~v~~Ll~~g------------a~~~ 210 (241)
T 1k1a_A 153 PLIHAVENNSLSMVQLLLQH----GANVNAQM------YSGSSALHSASGRGLLPLVRTLVRSG------------ADSS 210 (241)
T ss_dssp HHHHHHHTTCHHHHHHHHHT----TCCTTCBC------TTSCBHHHHHHHHTCHHHHHHHHHTT------------CCTT
T ss_pred HHHHHHHcCCHHHHHHHHHc----CCCCCCcC------CCCCCHHHHHHHcCCHHHHHHHHhcC------------CCCC
Confidence 45555666666666655543 12222111 12457777777777777777777653 2355
Q ss_pred CCCCCCCchhhhhcccCChhHHHHHhhcCc
Q 002028 929 LAGPGGITPLHLAACTSDSDDIIDALTNDP 958 (978)
Q Consensus 929 ~~GpsGlTPLHIAAs~~g~~~vldaLt~DP 958 (978)
..+..|.||||+|+.. +..+|+..|...|
T Consensus 211 ~~~~~g~tpl~~A~~~-~~~~i~~~l~~~~ 239 (241)
T 1k1a_A 211 LKNCHNDTPLMVARSR-RVIDILRGKATRP 239 (241)
T ss_dssp CCCTTSCCTTTTCSSH-HHHHHHTC-----
T ss_pred CcCCCCCCHHHHHHhc-CcHHHHhhhccCC
Confidence 5566777777777765 6666666665443
No 56
>4hbd_A KN motif and ankyrin repeat domain-containing Pro; structural genomics consortium, SGC, protein binding; 1.72A {Homo sapiens}
Probab=98.05 E-value=5.9e-06 Score=84.73 Aligned_cols=87 Identities=21% Similarity=0.195 Sum_probs=68.5
Q ss_pred HHHHHHhccchHHHHHHHHHHHHhccccCCCccHHHHHHhhhchHHHHHHHcCChhHHHHHHhhcccCCCCCCCccccCC
Q 002028 848 FLLVFSVDRGCCALVKAILDILVEGNLSMDGLSRESLEMLWEIQLLNRAVKMKCRRMVDLLIHYSLTSSNDTPQKYIFPP 927 (978)
Q Consensus 848 ~LL~FAverdWcAVvkkLLdiL~~g~v~~~~~s~~~~~~l~e~~LLH~AV~~~s~~mVelLL~~~~~~~~~~~~~y~F~p 927 (978)
..|-+|+.++-..+++.||.. +.+.+... -.+.||||+|++.++.+||++||... ..++
T Consensus 185 tpLh~A~~~g~~~~v~~Ll~~----gad~n~~d------~~G~TpLh~A~~~g~~~iv~~Ll~~~-----------gad~ 243 (276)
T 4hbd_A 185 TALMLAVSHGRVDVVKALLAC----EADVNVQD------DDGSTALMCACEHGHKEIAGLLLAVP-----------SCDI 243 (276)
T ss_dssp CHHHHHHHTTCHHHHHHHHHT----TCCTTCCC------TTSCCHHHHHHHHTCHHHHHHHHTST-----------TCCT
T ss_pred CHHHHHHHcCCHHHHHHHHhC----CCCCCCCC------CCCCCHHHHHHHCCCHHHHHHHHhcC-----------CCCC
Confidence 457788888888888888864 22322222 14789999999999999999999732 3457
Q ss_pred CCCCCCCCchhhhhcccCChhHHHHHhhc
Q 002028 928 NLAGPGGITPLHLAACTSDSDDIIDALTN 956 (978)
Q Consensus 928 d~~GpsGlTPLHIAAs~~g~~~vldaLt~ 956 (978)
++.+..|.||||+|+.. +..+|++.|..
T Consensus 244 ~~~d~~g~TpL~~A~~~-g~~~iv~~Ll~ 271 (276)
T 4hbd_A 244 SLTDRDGSTALMVALDA-GQSEIASMLYS 271 (276)
T ss_dssp TCCCTTSCCHHHHHHHH-TCHHHHHHHHH
T ss_pred cCcCCCCCCHHHHHHHc-CCHHHHHHHHh
Confidence 77899999999999998 88899999854
No 57
>2rfm_A Putative ankyrin repeat protein TV1425; ANK repeat, protein binding; HET: BU2 GOL; 1.65A {Thermoplasma volcanium}
Probab=98.04 E-value=7e-06 Score=78.32 Aligned_cols=86 Identities=17% Similarity=0.133 Sum_probs=66.8
Q ss_pred HHHHHHhccchHHHHHHHHHHHHhccccCCCccHHHHHHhhhchHHHHHHHcCChhHHHHHHhhcccCCCCCCCccccCC
Q 002028 848 FLLVFSVDRGCCALVKAILDILVEGNLSMDGLSRESLEMLWEIQLLNRAVKMKCRRMVDLLIHYSLTSSNDTPQKYIFPP 927 (978)
Q Consensus 848 ~LL~FAverdWcAVvkkLLdiL~~g~v~~~~~s~~~~~~l~e~~LLH~AV~~~s~~mVelLL~~~~~~~~~~~~~y~F~p 927 (978)
..|-+|+..+...+++.||.. +.+..... ..+.||||+|++.++.++|++|+.+. .++
T Consensus 103 t~L~~A~~~~~~~~v~~Ll~~----g~~~~~~~------~~g~t~L~~A~~~~~~~~v~~Ll~~g------------a~~ 160 (192)
T 2rfm_A 103 TPLMWSIIFGYSEMSYFLLEH----GANVNDRN------LEGETPLIVASKYGRSEIVKKLLELG------------ADI 160 (192)
T ss_dssp CHHHHHHHHTCHHHHHHHHHT----TCCSSCCC------TTCCCHHHHHHHHTCHHHHHHHHHTT------------CCT
T ss_pred cHHHHHHHcCCHHHHHHHHHC----CCCCCCCC------CCCCCHHHHHHHcCCHHHHHHHHHCC------------CCC
Confidence 356777888888888887753 33333222 14789999999999999999999874 346
Q ss_pred CCCCCCCCchhhhhcccCChhHHHHHhhc
Q 002028 928 NLAGPGGITPLHLAACTSDSDDIIDALTN 956 (978)
Q Consensus 928 d~~GpsGlTPLHIAAs~~g~~~vldaLt~ 956 (978)
+..+..|.||||+|+.. +..++++.|.+
T Consensus 161 ~~~~~~g~t~l~~A~~~-~~~~~v~~Ll~ 188 (192)
T 2rfm_A 161 SARDLTGLTAEASARIF-GRQEVIKIFTE 188 (192)
T ss_dssp TCBCTTSCBHHHHHHHT-TCHHHHHHHHH
T ss_pred CCcCCCCCCHHHHHHHh-CcHHHHHHHHh
Confidence 67789999999999987 88899999854
No 58
>1ikn_D Protein (I-kappa-B-alpha), protein (NF-kappa-B P50D subunit); transcription factor, IKB/NFKB complex; 2.30A {Homo sapiens} SCOP: d.211.1.1 PDB: 1nfi_E
Probab=98.02 E-value=1.2e-05 Score=78.88 Aligned_cols=87 Identities=18% Similarity=0.175 Sum_probs=67.9
Q ss_pred HHHHHHhccchHHHHHHHHHHHHhccccCCCccHHHHHHhhhchHHHHHHHcCChhHHHHHHhhcccCCCCCCCccccCC
Q 002028 848 FLLVFSVDRGCCALVKAILDILVEGNLSMDGLSRESLEMLWEIQLLNRAVKMKCRRMVDLLIHYSLTSSNDTPQKYIFPP 927 (978)
Q Consensus 848 ~LL~FAverdWcAVvkkLLdiL~~g~v~~~~~s~~~~~~l~e~~LLH~AV~~~s~~mVelLL~~~~~~~~~~~~~y~F~p 927 (978)
..|-+|+.++-..+++.||..- .+..... -..+.||||+||+.++.+||++||.+. .++
T Consensus 119 t~L~~A~~~~~~~~v~~Ll~~g----~~~~~~~-----~~~g~tpL~~A~~~~~~~~v~~Ll~~g------------a~~ 177 (236)
T 1ikn_D 119 TCLHLASIHGYLGIVELLVSLG----ADVNAQE-----PCNGRTALHLAVDLQNPDLVSLLLKCG------------ADV 177 (236)
T ss_dssp CHHHHHHHTTCHHHHHHHHHHT----CCTTCCC-----TTTCCCHHHHHHHTTCHHHHHHHHTTT------------CCS
T ss_pred CHHHHHHHcCCHHHHHHHHHcC----CCCCCCC-----CCCCCCHHHHHHHcCCHHHHHHHHHcC------------CCC
Confidence 4677888899999999888742 2222211 114789999999999999999999774 456
Q ss_pred CCCCCCCCchhhhhcccCChhHHHHHhhc
Q 002028 928 NLAGPGGITPLHLAACTSDSDDIIDALTN 956 (978)
Q Consensus 928 d~~GpsGlTPLHIAAs~~g~~~vldaLt~ 956 (978)
+..+..|+||||+|+.. +..+|+..|..
T Consensus 178 ~~~~~~g~tpl~~A~~~-~~~~~~~~Ll~ 205 (236)
T 1ikn_D 178 NRVTYQGYSPYQLTWGR-PSTRIQQQLGQ 205 (236)
T ss_dssp CCCCTTCCCGGGGCTTS-SCHHHHHHHHT
T ss_pred CcccCCCCCHHHHHHcc-CchHHHHHHHH
Confidence 77789999999999987 88899999944
No 59
>3ljn_A Hypothetical protein; ankyrin, structural genomics, PSI, structural genomics of pathogenic protozoa consortium, SGPP, ANK repeat; 2.90A {Leishmania major}
Probab=98.01 E-value=1.3e-05 Score=83.85 Aligned_cols=55 Identities=20% Similarity=0.255 Sum_probs=36.5
Q ss_pred HHHHHHhccc--hHHHHHHHHHHHHhccccCCCccHHHHHHhhhchHHHHHHHcCChhHHHHHHhhc
Q 002028 848 FLLVFSVDRG--CCALVKAILDILVEGNLSMDGLSRESLEMLWEIQLLNRAVKMKCRRMVDLLIHYS 912 (978)
Q Consensus 848 ~LL~FAverd--WcAVvkkLLdiL~~g~v~~~~~s~~~~~~l~e~~LLH~AV~~~s~~mVelLL~~~ 912 (978)
..|.+|+..+ ...+++.||..- .+..... -.+.|+||+|++.++.++|++||.+.
T Consensus 140 t~L~~A~~~g~~~~~~v~~Ll~~g----a~~~~~d------~~g~t~L~~A~~~g~~~~v~~Ll~~g 196 (364)
T 3ljn_A 140 TALHWCVGLGPEYLEMIKILVQLG----ASPTAKD------KADETPLMRAMEFRNREALDLMMDTV 196 (364)
T ss_dssp CHHHHHHHSCGGGHHHHHHHHHHT----CCTTCCC------TTSCCHHHHHHHTTCHHHHHHHHHHC
T ss_pred CHHHHHHHcCCchHHHHHHHHHcC----CCCcccC------CCCCCHHHHHHHcCCHHHHHHHHhcc
Confidence 4567788888 888888888752 2222111 13567788888878888888777764
No 60
>3hra_A Ankyrin repeat family protein; structural protein; 1.69A {Enterococcus faecalis}
Probab=98.01 E-value=1.1e-05 Score=76.76 Aligned_cols=53 Identities=23% Similarity=0.181 Sum_probs=26.7
Q ss_pred HHHHhccchHHHHHHHHHHHHhccccCCCccHHHHHHhhhchHHHHHHHcCChhHHHHHHhh
Q 002028 850 LVFSVDRGCCALVKAILDILVEGNLSMDGLSRESLEMLWEIQLLNRAVKMKCRRMVDLLIHY 911 (978)
Q Consensus 850 L~FAverdWcAVvkkLLdiL~~g~v~~~~~s~~~~~~l~e~~LLH~AV~~~s~~mVelLL~~ 911 (978)
|-+|+..+-..+++.||. .+..+...... .+.|+||+||+.++.++|++|+..
T Consensus 9 L~~A~~~g~~~~v~~ll~---~~~~~~~~~~~------~g~t~L~~A~~~~~~~~v~~Ll~~ 61 (201)
T 3hra_A 9 LLEAANQRDTKKVKEILQ---DTTYQVDEVDT------EGNTPLNIAVHNNDIEIAKALIDR 61 (201)
T ss_dssp HHHHHHTTCHHHHHHHHT---CTTCCTTCCCT------TSCCHHHHHHHHTCHHHHHHHHHT
T ss_pred HHHHHHhccHHHHHHHHH---cCCCCCCCCCC------CCCCHHHHHHHcCCHHHHHHHHHc
Confidence 445555555555555553 22222222211 245666666666666666666654
No 61
>3hra_A Ankyrin repeat family protein; structural protein; 1.69A {Enterococcus faecalis}
Probab=97.99 E-value=1.4e-05 Score=75.99 Aligned_cols=87 Identities=17% Similarity=0.153 Sum_probs=63.3
Q ss_pred HHHHHHhccchHHHHHHHHHHHHhccccCCCccHHHHHHhhhchHHHHHHHcCChhHHHHHHhhcccCCCCCCCccccCC
Q 002028 848 FLLVFSVDRGCCALVKAILDILVEGNLSMDGLSRESLEMLWEIQLLNRAVKMKCRRMVDLLIHYSLTSSNDTPQKYIFPP 927 (978)
Q Consensus 848 ~LL~FAverdWcAVvkkLLdiL~~g~v~~~~~s~~~~~~l~e~~LLH~AV~~~s~~mVelLL~~~~~~~~~~~~~y~F~p 927 (978)
..|.+|+.++...+++.||.. +..+...... .+.++||+|++.++.++|++|+.+.+ .++
T Consensus 74 t~l~~A~~~~~~~~~~~Ll~~---~~~~~~~~~~------~g~t~L~~A~~~~~~~~v~~Ll~~g~-----------~~~ 133 (201)
T 3hra_A 74 SPYLYAGAQGRTEILAYMLKH---ATPDLNKHNR------YGGNALIPAAEKGHIDNVKLLLEDGR-----------EDI 133 (201)
T ss_dssp CHHHHHHHTTCHHHHHHHHHH---SCCCTTCCCT------TSCCSHHHHHHTTCHHHHHHHHHHCC-----------CCT
T ss_pred CHHHHHHHcCCHHHHHHHHhc---cCcccccccC------CCCcHHHHHHHcCCHHHHHHHHHcCC-----------CCc
Confidence 356788888888888888753 2222222221 36799999999999999999998752 346
Q ss_pred CCCCCCCCchhhhhcccCCh----hHHHHHh
Q 002028 928 NLAGPGGITPLHLAACTSDS----DDIIDAL 954 (978)
Q Consensus 928 d~~GpsGlTPLHIAAs~~g~----~~vldaL 954 (978)
+..+..|.||||+|+..... .+++..|
T Consensus 134 ~~~~~~g~t~L~~A~~~~~~~~~~~~~v~~L 164 (201)
T 3hra_A 134 DFQNDFGYTALIEAVGLREGNQLYQDIVKLL 164 (201)
T ss_dssp TCCCTTSCCHHHHHHHSSCCSHHHHHHHHHH
T ss_pred CCCCCCCCCHHHHHHHhccchhhHHHHHHHH
Confidence 66778899999999877432 6788888
No 62
>2vge_A RELA-associated inhibitor; iaspp, nucleus, apoptosis, repressor, cytoplasm, phosphorylation, P53 binding protein, ANK repeat, SH3 domain; 2.10A {Homo sapiens}
Probab=97.99 E-value=1.3e-05 Score=80.62 Aligned_cols=87 Identities=10% Similarity=0.045 Sum_probs=66.6
Q ss_pred HHHHHHhccchHHHHHHHHHHHHhccccCCCccHHHHHHhhhchHHHHHHHcCChhHHHHHHhhcccCCCCCCCccccCC
Q 002028 848 FLLVFSVDRGCCALVKAILDILVEGNLSMDGLSRESLEMLWEIQLLNRAVKMKCRRMVDLLIHYSLTSSNDTPQKYIFPP 927 (978)
Q Consensus 848 ~LL~FAverdWcAVvkkLLdiL~~g~v~~~~~s~~~~~~l~e~~LLH~AV~~~s~~mVelLL~~~~~~~~~~~~~y~F~p 927 (978)
-.|-+|+..+...+++.||.. +.+...... .+.||||+|+..++.++|++||.+. .++
T Consensus 56 tpLh~A~~~g~~~~v~~Ll~~----ga~~n~~d~------~g~tpLh~A~~~g~~~~v~~Ll~~g------------a~~ 113 (229)
T 2vge_A 56 TALHNAICGANYSIVDFLITA----GANVNSPDS------HGWTPLHCAASCNDTVICMALVQHG------------AAI 113 (229)
T ss_dssp CHHHHHHHTTCHHHHHHHHHT----TCCTTCCCT------TCCCHHHHHHHTTCHHHHHHHHTTT------------CCT
T ss_pred CHHHHHHHcCCHHHHHHHHHC----CCCCCCCCC------CCCCHHHHHHHcCCHHHHHHHHHcC------------CCc
Confidence 467888999999999988864 333332221 4789999999999999999999774 235
Q ss_pred CCCC-CCCCchhhhh-cccCChhHHHHHhhc
Q 002028 928 NLAG-PGGITPLHLA-ACTSDSDDIIDALTN 956 (978)
Q Consensus 928 d~~G-psGlTPLHIA-As~~g~~~vldaLt~ 956 (978)
+..+ ..|+||||+| |+..+..++++.|.+
T Consensus 114 ~~~~~~~g~tpL~~A~a~~~~~~~~v~~Ll~ 144 (229)
T 2vge_A 114 FATTLSDGATAFEKCDPYREGYADCATYLAD 144 (229)
T ss_dssp TCCCSSTTCCTGGGCCTTSTTHHHHHHHHHH
T ss_pred ccccCCCCCCHHHHHHHHhcChHHHHHHHHH
Confidence 5544 5899999999 355599999999943
No 63
>3ljn_A Hypothetical protein; ankyrin, structural genomics, PSI, structural genomics of pathogenic protozoa consortium, SGPP, ANK repeat; 2.90A {Leishmania major}
Probab=97.98 E-value=6.7e-06 Score=86.10 Aligned_cols=90 Identities=12% Similarity=0.100 Sum_probs=70.4
Q ss_pred HHHHHHhccchHHHHHHHHHHHHh-ccccCCCccHHHHHHhhhchHHHHHHHcCChhHHHHHHhhcccCCCCCCCccccC
Q 002028 848 FLLVFSVDRGCCALVKAILDILVE-GNLSMDGLSRESLEMLWEIQLLNRAVKMKCRRMVDLLIHYSLTSSNDTPQKYIFP 926 (978)
Q Consensus 848 ~LL~FAverdWcAVvkkLLdiL~~-g~v~~~~~s~~~~~~l~e~~LLH~AV~~~s~~mVelLL~~~~~~~~~~~~~y~F~ 926 (978)
..|.+|+..+-..+++.||..-.. ..++.+... -.+.|+||+|++.++.+||++||.+. .+
T Consensus 175 t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~------~~g~t~L~~A~~~g~~~~v~~Ll~~g------------ad 236 (364)
T 3ljn_A 175 TPLMRAMEFRNREALDLMMDTVPSKSSLRLDYAN------KQGNSHLHWAILINWEDVAMRFVEMG------------ID 236 (364)
T ss_dssp CHHHHHHHTTCHHHHHHHHHHCSCSSSCCTTCCC------TTCCCTTHHHHTTTCHHHHHHHHTTT------------CC
T ss_pred CHHHHHHHcCCHHHHHHHHhcccccccccccccC------CCCCcHHHHHHHcCCHHHHHHHHHcC------------CC
Confidence 467888999999999999886433 122222221 13779999999999999999999764 45
Q ss_pred CCCCCCCCCchhhhhcccCChhHHHHHhhc
Q 002028 927 PNLAGPGGITPLHLAACTSDSDDIIDALTN 956 (978)
Q Consensus 927 pd~~GpsGlTPLHIAAs~~g~~~vldaLt~ 956 (978)
++..+..|.||||+|+.. +..+|+..|.+
T Consensus 237 ~~~~d~~g~tpL~~A~~~-g~~~~v~~Ll~ 265 (364)
T 3ljn_A 237 VNMEDNEHTVPLYLSVRA-AMVLLTKELLQ 265 (364)
T ss_dssp TTCCCTTSCCHHHHHHHT-CCHHHHHHHHH
T ss_pred CCCCCCCCCCHHHHHHHh-ChHHHHHHHHH
Confidence 777889999999999988 88899999944
No 64
>2f8y_A Notch homolog 1, translocation-associated (drosophila); ankyrin repeats, transcription; 1.55A {Homo sapiens} PDB: 2qc9_A 1ymp_A
Probab=97.96 E-value=1.5e-05 Score=77.00 Aligned_cols=84 Identities=14% Similarity=0.168 Sum_probs=49.1
Q ss_pred HHHHHHhccchHHHHHHHHHHHHhccccCCCccHHHHHHhhhchHHHHHHHcCChhHHHHHHhhcccCCCCCCCccccCC
Q 002028 848 FLLVFSVDRGCCALVKAILDILVEGNLSMDGLSRESLEMLWEIQLLNRAVKMKCRRMVDLLIHYSLTSSNDTPQKYIFPP 927 (978)
Q Consensus 848 ~LL~FAverdWcAVvkkLLdiL~~g~v~~~~~s~~~~~~l~e~~LLH~AV~~~s~~mVelLL~~~~~~~~~~~~~y~F~p 927 (978)
..|.+|+..+...+++.||.. +.+..... ..+.|+||+|++.++.++|++|+.+. .++
T Consensus 94 t~L~~A~~~~~~~~~~~Ll~~----g~~~~~~~------~~g~t~L~~A~~~~~~~~v~~Ll~~g------------~~~ 151 (223)
T 2f8y_A 94 TPLILAARLAVEGMLEDLINS----HADVNAVD------DLGKSALHWAAAVNNVDAAVVLLKNG------------ANK 151 (223)
T ss_dssp CHHHHHHHHTCHHHHHHHHHT----TCCTTCBC------TTSCBHHHHHHHTTCHHHHHHHHHTT------------CCT
T ss_pred cHHHHHHHhCcHHHHHHHHHc----CCCCcCcC------CCCCcHHHHHHHcCCHHHHHHHHHcC------------CCC
Confidence 356667777777777777652 22222111 12567777777777777777777653 234
Q ss_pred CCCCCCCCchhhhhcccCChhHHHHHh
Q 002028 928 NLAGPGGITPLHLAACTSDSDDIIDAL 954 (978)
Q Consensus 928 d~~GpsGlTPLHIAAs~~g~~~vldaL 954 (978)
+..+..|.||||+|+.. +..+++..|
T Consensus 152 ~~~~~~g~t~L~~A~~~-~~~~~v~~L 177 (223)
T 2f8y_A 152 DMQNNREETPLFLAARE-GSYETAKVL 177 (223)
T ss_dssp TCCCTTCCCHHHHHHHH-TCHHHHHHH
T ss_pred CCcCCCCcCHHHHHHHc-CCHHHHHHH
Confidence 44555666666666655 555555555
No 65
>2pnn_A Transient receptor potential cation channel subfa member 1; TRPV1, ankyrin repeat domain, transport protein; HET: ATP; 2.70A {Rattus norvegicus} PDB: 2nyj_A*
Probab=97.96 E-value=1.2e-05 Score=80.77 Aligned_cols=95 Identities=15% Similarity=0.159 Sum_probs=66.6
Q ss_pred HHHHHHhccchHHHHHHHHHHHHhccccCCCccHHH-HH-------HhhhchHHHHHHHcCChhHHHHHHhhcccCCCCC
Q 002028 848 FLLVFSVDRGCCALVKAILDILVEGNLSMDGLSRES-LE-------MLWEIQLLNRAVKMKCRRMVDLLIHYSLTSSNDT 919 (978)
Q Consensus 848 ~LL~FAverdWcAVvkkLLdiL~~g~v~~~~~s~~~-~~-------~l~e~~LLH~AV~~~s~~mVelLL~~~~~~~~~~ 919 (978)
-.|-+|+..+...+++.||.. +.+........ +. -..+.|+||+||+.++.+||++||....
T Consensus 103 tpL~~A~~~g~~~~v~~Ll~~----ga~~~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~------ 172 (273)
T 2pnn_A 103 TALHIAIERRNMTLVTLLVEN----GADVQAAANGDFFKKTKGRPGFYFGELPLSLAACTNQLAIVKFLLQNSW------ 172 (273)
T ss_dssp CHHHHHHHTTCHHHHHHHHHT----TCCTTCCBCSGGGSSCSSSCCCCSCBSHHHHHHHTTCHHHHHHHHHCSS------
T ss_pred CHHHHHHHcCCHHHHHHHHHC----CCCcCccccccccccccccccccCCCCHHHHHHHcCCHHHHHHHHhccc------
Confidence 467889999999999998874 22222111000 00 0037899999999999999999997210
Q ss_pred CCccccCCCCCCCCCCchhhhhcccCCh--------hHHHHHhh
Q 002028 920 PQKYIFPPNLAGPGGITPLHLAACTSDS--------DDIIDALT 955 (978)
Q Consensus 920 ~~~y~F~pd~~GpsGlTPLHIAAs~~g~--------~~vldaLt 955 (978)
+..+++..+..|+||||+||..... .+|++.|.
T Consensus 173 ---~gad~~~~d~~g~tpLh~A~~~~~~~~~~~~~~~~~v~~Ll 213 (273)
T 2pnn_A 173 ---QPADISARDSVGNTVLHALVEVADNTVDNTKFVTSMYNEIL 213 (273)
T ss_dssp ---CCCCTTCCCTTSCCHHHHHHHHCCSCHHHHHHHHHHHHHHH
T ss_pred ---CCCCceeeCCCCCcHHHHHHHccCcchhHHHHHHHHHHHHH
Confidence 1345777889999999999987432 57888773
No 66
>1bi7_B P16INK4A, MTS1, multiple tumor suppressor; cyclin dependent kinase, cyclin dependent kinase inhibitory protein, CDK, cell cycle; 3.40A {Homo sapiens} SCOP: d.211.1.1 PDB: 1a5e_A 1dc2_A 2a5e_A
Probab=97.96 E-value=1.3e-05 Score=74.63 Aligned_cols=78 Identities=13% Similarity=0.082 Sum_probs=58.7
Q ss_pred cchHHHHHHHHHHHHhccccCCCccHHHHHHhhhch-HHHHHHHcCChhHHHHHHhhcccCCCCCCCccccCCCCCCCCC
Q 002028 856 RGCCALVKAILDILVEGNLSMDGLSRESLEMLWEIQ-LLNRAVKMKCRRMVDLLIHYSLTSSNDTPQKYIFPPNLAGPGG 934 (978)
Q Consensus 856 rdWcAVvkkLLdiL~~g~v~~~~~s~~~~~~l~e~~-LLH~AV~~~s~~mVelLL~~~~~~~~~~~~~y~F~pd~~GpsG 934 (978)
++-..+++.||.. +.+...... .+.+ +||+|++.++.++|++||.+. .+++..+..|
T Consensus 54 ~~~~~~v~~Ll~~----g~~~~~~d~------~g~ttpL~~A~~~~~~~~v~~Ll~~g------------a~~~~~d~~g 111 (156)
T 1bi7_B 54 MGSARVAELLLLH----GAEPNCADP------ATLTRPVHDAAREGFLDTLVVLHRAG------------ARLDVRDAWG 111 (156)
T ss_dssp TTCHHHHHHHHTT----TCCCCCCCT------TTCCCHHHHHHHHTCHHHHHHHHHHT------------CCSSCCCTTC
T ss_pred cCCHHHHHHHHHc----CCCCCCcCC------CCCcHHHHHHHHCCCHHHHHHHHHcC------------CCCcccCCCC
Confidence 5666677766642 333332221 3567 999999999999999999874 3466778899
Q ss_pred CchhhhhcccCChhHHHHHhhc
Q 002028 935 ITPLHLAACTSDSDDIIDALTN 956 (978)
Q Consensus 935 lTPLHIAAs~~g~~~vldaLt~ 956 (978)
+||||+|+.. +..+++..|..
T Consensus 112 ~tpl~~A~~~-~~~~~v~~Ll~ 132 (156)
T 1bi7_B 112 RLPVDLAEEL-GHRDVARYLRA 132 (156)
T ss_dssp CCHHHHHHHH-TCHHHHHHHSS
T ss_pred CCHHHHHHHh-CHHHHHHHHHH
Confidence 9999999988 88899999943
No 67
>1ikn_D Protein (I-kappa-B-alpha), protein (NF-kappa-B P50D subunit); transcription factor, IKB/NFKB complex; 2.30A {Homo sapiens} SCOP: d.211.1.1 PDB: 1nfi_E
Probab=97.95 E-value=1.1e-05 Score=79.23 Aligned_cols=90 Identities=23% Similarity=0.284 Sum_probs=66.5
Q ss_pred HHHHHHhccchHHHHHHHHHHHHhcccc--CCCccHHHHHHhhhchHHHHHHHcCChhHHHHHHhhcccCCCCCCCcccc
Q 002028 848 FLLVFSVDRGCCALVKAILDILVEGNLS--MDGLSRESLEMLWEIQLLNRAVKMKCRRMVDLLIHYSLTSSNDTPQKYIF 925 (978)
Q Consensus 848 ~LL~FAverdWcAVvkkLLdiL~~g~v~--~~~~s~~~~~~l~e~~LLH~AV~~~s~~mVelLL~~~~~~~~~~~~~y~F 925 (978)
..|.+|+..+...+++.||..-...... ..... ..+.++||+|++.++.+||++||.+. .
T Consensus 80 t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~------~~g~t~L~~A~~~~~~~~v~~Ll~~g------------~ 141 (236)
T 1ikn_D 80 TPLHLACEQGCLASVGVLTQSCTTPHLHSILKATN------YNGHTCLHLASIHGYLGIVELLVSLG------------A 141 (236)
T ss_dssp CHHHHHHHHTCHHHHHHHHHSTTTTSSSCGGGCCC------TTCCCHHHHHHHTTCHHHHHHHHHHT------------C
T ss_pred CHHHHHHHcCCHHHHHHHHhcccchhHHHHhhccC------CCCCCHHHHHHHcCCHHHHHHHHHcC------------C
Confidence 4577888889988988888743221110 00000 13789999999999999999999874 3
Q ss_pred CCCCCCC-CCCchhhhhcccCChhHHHHHhhc
Q 002028 926 PPNLAGP-GGITPLHLAACTSDSDDIIDALTN 956 (978)
Q Consensus 926 ~pd~~Gp-sGlTPLHIAAs~~g~~~vldaLt~ 956 (978)
+++..+. .|.||||+|+.. +..+++..|.+
T Consensus 142 ~~~~~~~~~g~tpL~~A~~~-~~~~~v~~Ll~ 172 (236)
T 1ikn_D 142 DVNAQEPCNGRTALHLAVDL-QNPDLVSLLLK 172 (236)
T ss_dssp CTTCCCTTTCCCHHHHHHHT-TCHHHHHHHHT
T ss_pred CCCCCCCCCCCCHHHHHHHc-CCHHHHHHHHH
Confidence 4555665 899999999987 88899999943
No 68
>3aji_A 26S proteasome non-ATPase regulatory subunit 10; gankyrin, S6 ATPase, P-benzoyl-L-phenylalanine, PBPA, amber suppression; HET: PBF; 2.05A {Mus musculus} PDB: 2dvw_A 2dwz_A* 1tr4_A 1uoh_A 1qym_A
Probab=97.95 E-value=1.7e-05 Score=76.99 Aligned_cols=83 Identities=22% Similarity=0.326 Sum_probs=55.5
Q ss_pred HHHHHhccchHHHHHHHHHHHHhccccCCCccHHHHHHhhhchHHHHHHHcCChhHHHHHHhhcccCCCCCCCccccCCC
Q 002028 849 LLVFSVDRGCCALVKAILDILVEGNLSMDGLSRESLEMLWEIQLLNRAVKMKCRRMVDLLIHYSLTSSNDTPQKYIFPPN 928 (978)
Q Consensus 849 LL~FAverdWcAVvkkLLdiL~~g~v~~~~~s~~~~~~l~e~~LLH~AV~~~s~~mVelLL~~~~~~~~~~~~~y~F~pd 928 (978)
.|.+|+.++...+++.||.. +.+..... ..+.++||+|++.++.+||++|+.+. .+++
T Consensus 109 ~L~~A~~~~~~~~~~~Ll~~----g~~~~~~~------~~g~t~L~~A~~~~~~~~v~~Ll~~g------------~~~~ 166 (231)
T 3aji_A 109 PLHYAASKNRHEIAVMLLEG----GANPDAKD------HYDATAMHRAAAKGNLKMVHILLFYK------------ASTN 166 (231)
T ss_dssp HHHHHHHTTCHHHHHHHHHT----TCCTTCCC------TTSCCHHHHHHHHTCHHHHHHHHHTT------------CCSC
T ss_pred HHHHHHHcCCHHHHHHHHHc----CCCCCCcC------CCCCcHHHHHHHcCCHHHHHHHHhcC------------CCcc
Confidence 45566666666666666542 22211111 13568888888888888888888763 3456
Q ss_pred CCCCCCCchhhhhcccCChhHHHHHh
Q 002028 929 LAGPGGITPLHLAACTSDSDDIIDAL 954 (978)
Q Consensus 929 ~~GpsGlTPLHIAAs~~g~~~vldaL 954 (978)
..+..|.||||+|+.. +..++++.|
T Consensus 167 ~~~~~g~t~L~~A~~~-~~~~~v~~L 191 (231)
T 3aji_A 167 IQDTEGNTPLHLACDE-ERVEEAKFL 191 (231)
T ss_dssp CCCTTSCCHHHHHHHT-TCHHHHHHH
T ss_pred ccCCCCCCHHHHHHHC-CCHHHHHHH
Confidence 6677888888888876 677788877
No 69
>3utm_A Tankyrase-1; tankyrase, TNKS, ankryin repeat clusters, WNT signaling, POL ribosylation, transferase-signaling protein complex; 2.00A {Mus musculus}
Probab=97.95 E-value=1.5e-05 Score=81.05 Aligned_cols=85 Identities=18% Similarity=0.161 Sum_probs=68.1
Q ss_pred HHHHHHhccchHHHHHHHHHHHHhccccCCCccHHHHHHhhhchHHHHHHHcCChhHHHHHHhhcccCCCCCCCccccCC
Q 002028 848 FLLVFSVDRGCCALVKAILDILVEGNLSMDGLSRESLEMLWEIQLLNRAVKMKCRRMVDLLIHYSLTSSNDTPQKYIFPP 927 (978)
Q Consensus 848 ~LL~FAverdWcAVvkkLLdiL~~g~v~~~~~s~~~~~~l~e~~LLH~AV~~~s~~mVelLL~~~~~~~~~~~~~y~F~p 927 (978)
..|-+|+..+-..+++.||.. +.+...... .+.||||+||+.++.+||++|+.+. .++
T Consensus 60 t~L~~A~~~g~~~~v~~Ll~~----g~~~~~~~~------~g~t~L~~A~~~g~~~iv~~Ll~~g------------~~~ 117 (351)
T 3utm_A 60 TPLHLAAGYNRVRIVQLLLQH----GADVHAKDK------GGLVPLHNACSYGHYEVTELLLKHG------------ACV 117 (351)
T ss_dssp CHHHHHHHTTCHHHHHHHHHT----TCCTTCCCT------TCCCHHHHHHHTTCHHHHHHHHHTT------------CCT
T ss_pred CHHHHHHHcCCHHHHHHHHHc----CCCCCccCC------CCCcHHHHHHHCCCHHHHHHHHHCC------------CCC
Confidence 578899999999999999874 223222221 4789999999999999999999874 346
Q ss_pred CCCCCCCCchhhhhcccCChhHHHHHhh
Q 002028 928 NLAGPGGITPLHLAACTSDSDDIIDALT 955 (978)
Q Consensus 928 d~~GpsGlTPLHIAAs~~g~~~vldaLt 955 (978)
+..+..|+||||+|+.. +..++++.|.
T Consensus 118 ~~~~~~g~t~L~~A~~~-~~~~~v~~Ll 144 (351)
T 3utm_A 118 NAMDLWQFTPLHEAASK-NRVEVCSLLL 144 (351)
T ss_dssp TCCCTTCCCHHHHHHHT-TCHHHHHHHH
T ss_pred CCCCCCCCCHHHHHHHc-CCHHHHHHHH
Confidence 66788899999999987 8888999984
No 70
>1yyh_A HN1;, notch 1, ankyrin domain; ankyrin repeats, cell cycle,transcription; 1.90A {Homo sapiens} PDB: 2he0_A 2f8x_K 3nbn_B 3v79_K* 1ot8_A
Probab=97.93 E-value=1.2e-05 Score=80.43 Aligned_cols=83 Identities=14% Similarity=0.179 Sum_probs=43.8
Q ss_pred HHHHHhccchHHHHHHHHHHHHhccccCCCccHHHHHHhhhchHHHHHHHcCChhHHHHHHhhcccCCCCCCCccccCCC
Q 002028 849 LLVFSVDRGCCALVKAILDILVEGNLSMDGLSRESLEMLWEIQLLNRAVKMKCRRMVDLLIHYSLTSSNDTPQKYIFPPN 928 (978)
Q Consensus 849 LL~FAverdWcAVvkkLLdiL~~g~v~~~~~s~~~~~~l~e~~LLH~AV~~~s~~mVelLL~~~~~~~~~~~~~y~F~pd 928 (978)
.|.+|+..+-..+++.||.. +.+..... -.+.|+||+||+.++.++|++||.+. .+++
T Consensus 127 ~L~~A~~~~~~~~v~~Ll~~----g~~~~~~d------~~g~t~L~~A~~~~~~~~v~~Ll~~g------------a~~~ 184 (253)
T 1yyh_A 127 PLILAARLAVEGMLEDLINS----HADVNAVD------DLGKSALHWAAAVNNVDAAVVLLKNG------------ANKD 184 (253)
T ss_dssp HHHHHHHHTCSSHHHHHHHT----TCCTTCBC------TTSCBHHHHHHHHTCHHHHHHHHHTT------------CCTT
T ss_pred HHHHHHHcChHHHHHHHHHc----CCCCCCcC------CCCCCHHHHHHHcCCHHHHHHHHHcC------------CCCC
Confidence 45556666666666666652 22222111 12556777777777777777776553 2234
Q ss_pred CCCCCCCchhhhhcccCChhHHHHHh
Q 002028 929 LAGPGGITPLHLAACTSDSDDIIDAL 954 (978)
Q Consensus 929 ~~GpsGlTPLHIAAs~~g~~~vldaL 954 (978)
..+..|.||||+|+.. +..+++..|
T Consensus 185 ~~~~~g~tpL~~A~~~-~~~~~v~~L 209 (253)
T 1yyh_A 185 MQNNREETPLFLAARE-GSYETAKVL 209 (253)
T ss_dssp CCCTTSCCHHHHHHHH-TCHHHHHHH
T ss_pred CcCCCCCCHHHHHHHC-CCHHHHHHH
Confidence 4445555555555544 444555555
No 71
>1s70_B 130 kDa myosin-binding subunit of smooth muscle myosin phophatase (M130), serine/threonine protein phosphatase PP1-beta (OR delta) catalytic subunit; myosin phosphatase; HET: PGE; 2.70A {Gallus gallus} SCOP: d.211.1.1
Probab=97.93 E-value=1.5e-05 Score=80.40 Aligned_cols=54 Identities=26% Similarity=0.291 Sum_probs=46.5
Q ss_pred hchHHHHHHHcCChhHHHHHHhhcccCCCCCCCccccCCCCCCCCCCchhhhhcccCChhHHHHHhh
Q 002028 889 EIQLLNRAVKMKCRRMVDLLIHYSLTSSNDTPQKYIFPPNLAGPGGITPLHLAACTSDSDDIIDALT 955 (978)
Q Consensus 889 e~~LLH~AV~~~s~~mVelLL~~~~~~~~~~~~~y~F~pd~~GpsGlTPLHIAAs~~g~~~vldaLt 955 (978)
+.|+||+|++.++.++|++|+.+. .+++..+..|+||||+||.. +..+++..|.
T Consensus 199 g~t~L~~A~~~g~~~~v~~Ll~~g------------~d~~~~d~~g~tpL~~A~~~-~~~~~v~~Ll 252 (299)
T 1s70_B 199 GGTALHVAAAKGYTEVLKLLIQAR------------YDVNIKDYDGWTPLHAAAHW-GKEEACRILV 252 (299)
T ss_dssp CCCHHHHHHHHTCHHHHHHHHTTT------------CCTTCCCTTCCCHHHHHHHT-TCHHHHHHHH
T ss_pred CCCHHHHHHHCCcHHHHHHHHHcC------------CCCCCcCCCCCcHHHHHHhc-CCHHHHHHHH
Confidence 679999999999999999999763 45777788999999999887 8888998883
No 72
>2pnn_A Transient receptor potential cation channel subfa member 1; TRPV1, ankyrin repeat domain, transport protein; HET: ATP; 2.70A {Rattus norvegicus} PDB: 2nyj_A*
Probab=97.93 E-value=1.8e-05 Score=79.60 Aligned_cols=103 Identities=19% Similarity=0.199 Sum_probs=64.8
Q ss_pred HHHHHHhcc---chHHHHHHHHHHHHhcc-----ccCCCccHHHHHHhhhchHHHHHHHcCChhHHHHHHhhcccCCCCC
Q 002028 848 FLLVFSVDR---GCCALVKAILDILVEGN-----LSMDGLSRESLEMLWEIQLLNRAVKMKCRRMVDLLIHYSLTSSNDT 919 (978)
Q Consensus 848 ~LL~FAver---dWcAVvkkLLdiL~~g~-----v~~~~~s~~~~~~l~e~~LLH~AV~~~s~~mVelLL~~~~~~~~~~ 919 (978)
-.|-+|+.. +-..+++.||..-.... +....... . -.+.|+||+||+.++.+||++||.+........
T Consensus 56 tpL~~A~~~~~~g~~~~v~~Ll~~ga~~~~~~~~i~~~~~~~---d-~~g~tpL~~A~~~g~~~~v~~Ll~~ga~~~~~~ 131 (273)
T 2pnn_A 56 TCLLKAMLNLHNGQNDTIALLLDVARKTDSLKQFVNASYTDS---Y-YKGQTALHIAIERRNMTLVTLLVENGADVQAAA 131 (273)
T ss_dssp CHHHHHHHSCBTTBCHHHHHHHHHHHHTTCHHHHHTCCCCST---T-TTTCCHHHHHHHTTCHHHHHHHHHTTCCTTCCB
T ss_pred CHHHHHHHHHhcCChHHHHHHHHhhccccchhHHhhcccccc---c-CCCCCHHHHHHHcCCHHHHHHHHHCCCCcCccc
Confidence 356667754 77888999988754311 01000000 0 147899999999999999999998854111000
Q ss_pred CCccccCC---CCCCCCCCchhhhhcccCChhHHHHHhhc
Q 002028 920 PQKYIFPP---NLAGPGGITPLHLAACTSDSDDIIDALTN 956 (978)
Q Consensus 920 ~~~y~F~p---d~~GpsGlTPLHIAAs~~g~~~vldaLt~ 956 (978)
...| |.. ......|+||||+||.. +..+++..|.+
T Consensus 132 ~~~~-~~~~~~~~~~~~g~tpL~~A~~~-g~~~~v~~Ll~ 169 (273)
T 2pnn_A 132 NGDF-FKKTKGRPGFYFGELPLSLAACT-NQLAIVKFLLQ 169 (273)
T ss_dssp CSGG-GSSCSSSCCCCSCBSHHHHHHHT-TCHHHHHHHHH
T ss_pred cccc-cccccccccccCCCCHHHHHHHc-CCHHHHHHHHh
Confidence 0111 111 11123799999999998 78899999955
No 73
>3kea_A K1L; tropism, ANK repeat, viral protein; 2.30A {Vaccinia virus}
Probab=97.91 E-value=1.4e-05 Score=82.23 Aligned_cols=82 Identities=15% Similarity=0.124 Sum_probs=45.8
Q ss_pred HHHHHHhccchHHHHHHHHHHHHhccccCCCccHHHHHHhhhchHHHHHHHcCChhHHHHHHhhcccCCCCCCCccccCC
Q 002028 848 FLLVFSVDRGCCALVKAILDILVEGNLSMDGLSRESLEMLWEIQLLNRAVKMKCRRMVDLLIHYSLTSSNDTPQKYIFPP 927 (978)
Q Consensus 848 ~LL~FAverdWcAVvkkLLdiL~~g~v~~~~~s~~~~~~l~e~~LLH~AV~~~s~~mVelLL~~~~~~~~~~~~~y~F~p 927 (978)
..|-+|+..+...+++.||..-.. .... .+.||||+|++.++.++|++|+.+. .++
T Consensus 33 t~L~~A~~~g~~~~v~~Ll~~g~~----~~~~--------~g~t~L~~A~~~g~~~~v~~Ll~~g------------a~~ 88 (285)
T 3kea_A 33 SASYYAIADNNVRLVCTLLNAGAL----KNLL--------ENEFPLHQAATLEDTKIVKILLFSG------------LDD 88 (285)
T ss_dssp CHHHHHHHTTCHHHHHHHHHTTGG----GSCC--------TTCCHHHHHTTSSSCHHHHHHHHTT------------CCT
T ss_pred CHHHHHHHcCCHHHHHHHHhCCCC----CCCC--------CCCCHHHHHHHcCCHHHHHHHHHCC------------CCC
Confidence 356677788888888877764211 1111 2456666666666666666666543 223
Q ss_pred CCCCCCCCchhhhhcccCChhHHHHHh
Q 002028 928 NLAGPGGITPLHLAACTSDSDDIIDAL 954 (978)
Q Consensus 928 d~~GpsGlTPLHIAAs~~g~~~vldaL 954 (978)
+..+..|+||||+||.. +..+++..|
T Consensus 89 ~~~d~~g~t~L~~A~~~-g~~~~v~~L 114 (285)
T 3kea_A 89 SQFDDKGNTALYYAVDS-GNMQTVKLF 114 (285)
T ss_dssp TCCCTTSCCHHHHHHHT-TCHHHHHHH
T ss_pred CCcCCCCCcHHHHHHHc-CCHHHHHHH
Confidence 34444555555555544 444555554
No 74
>1bd8_A P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyrin motif; 1.80A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bi8_B 1ap7_A 1blx_B
Probab=97.91 E-value=1.4e-05 Score=73.36 Aligned_cols=86 Identities=23% Similarity=0.234 Sum_probs=68.2
Q ss_pred HHHHHHHhccchHHHHHHHHHHHHhccccCCCccHHHHHHhhhchHHHHHHHcCChhHHHHHHhhcccCCCCCCCccccC
Q 002028 847 KFLLVFSVDRGCCALVKAILDILVEGNLSMDGLSRESLEMLWEIQLLNRAVKMKCRRMVDLLIHYSLTSSNDTPQKYIFP 926 (978)
Q Consensus 847 k~LL~FAverdWcAVvkkLLdiL~~g~v~~~~~s~~~~~~l~e~~LLH~AV~~~s~~mVelLL~~~~~~~~~~~~~y~F~ 926 (978)
...|-+|+..+-..+++.||.. . ..+.+.... .+.|+||+ +..++.++|++|+.+. .+
T Consensus 3 ~~~L~~A~~~g~~~~v~~ll~~-~--~~~~~~~~~------~g~t~L~~-~~~~~~~~v~~Ll~~g------------~~ 60 (156)
T 1bd8_A 3 GDRLSGAAARGDVQEVRRLLHR-E--LVHPDALNR------FGKTALQV-MMFGSTAIALELLKQG------------AS 60 (156)
T ss_dssp HHHHHHHHHHTCHHHHHHHHHT-T--CCCTTCCCT------TSCCHHHH-SCTTCHHHHHHHHHTT------------CC
T ss_pred chHHHHHHHhCCHHHHHHHHHh-h--CcCccccCC------CCCcHHHH-HHcCCHHHHHHHHHCC------------CC
Confidence 4567889999999999999987 2 122222221 37899999 9999999999999774 34
Q ss_pred CCCCCCCCCchhhhhcccCChhHHHHHhh
Q 002028 927 PNLAGPGGITPLHLAACTSDSDDIIDALT 955 (978)
Q Consensus 927 pd~~GpsGlTPLHIAAs~~g~~~vldaLt 955 (978)
++..+..|.||||+||.. +..++++.|.
T Consensus 61 ~~~~~~~g~t~L~~A~~~-~~~~~v~~Ll 88 (156)
T 1bd8_A 61 PNVQDTSGTSPVHDAART-GFLDTLKVLV 88 (156)
T ss_dssp TTCCCTTSCCHHHHHHHT-TCHHHHHHHH
T ss_pred CCCcCCCCCCHHHHHHHc-CcHHHHHHHH
Confidence 677788999999999988 8889999883
No 75
>2xai_A ASB-9, ankyrin repeat and SOCS box protein 9; transcription regulation, autoantibody; 2.58A {Homo sapiens}
Probab=97.91 E-value=1.6e-05 Score=80.00 Aligned_cols=53 Identities=9% Similarity=0.060 Sum_probs=28.0
Q ss_pred HHHHHhccchHHHHHHHHHHHHhccccCCCccHHHHHHhhhchHHHHHHHcCChhHHHHHHhh
Q 002028 849 LLVFSVDRGCCALVKAILDILVEGNLSMDGLSRESLEMLWEIQLLNRAVKMKCRRMVDLLIHY 911 (978)
Q Consensus 849 LL~FAverdWcAVvkkLLdiL~~g~v~~~~~s~~~~~~l~e~~LLH~AV~~~s~~mVelLL~~ 911 (978)
.|-+|+.++-..+++.||.. +.+...... .+.|+||+|++.++.++|++|+..
T Consensus 6 ~L~~A~~~g~~~~v~~Ll~~----g~~~~~~~~------~g~t~L~~A~~~g~~~~v~~Ll~~ 58 (261)
T 2xai_A 6 PMHEAAIHGHQLSLRNLISQ----GWAVNIITA------DHVSPLHEACLGGHLSCVKILLKH 58 (261)
T ss_dssp HHHHHHHHTCHHHHHHHHHT----TCCSSCCCT------TCCCHHHHHHHHTCHHHHHHHHHT
T ss_pred HHHHHHHcCCHHHHHHHHHC----CCCCCCcCC------CCCCHHHHHHHcCCHHHHHHHHHC
Confidence 35566666666666666652 122221111 245666666666666666666654
No 76
>1wdy_A 2-5A-dependent ribonuclease; hydrolase, RNA-binding; HET: 25A; 1.80A {Homo sapiens} SCOP: d.211.1.1
Probab=97.90 E-value=1.9e-05 Score=77.71 Aligned_cols=56 Identities=25% Similarity=0.139 Sum_probs=48.2
Q ss_pred hhchHHHHHHHcCChhHHHHHHhhcccCCCCCCCccccCCCCCCCCCCchhhhhcccCChhHHHHHhh
Q 002028 888 WEIQLLNRAVKMKCRRMVDLLIHYSLTSSNDTPQKYIFPPNLAGPGGITPLHLAACTSDSDDIIDALT 955 (978)
Q Consensus 888 ~e~~LLH~AV~~~s~~mVelLL~~~~~~~~~~~~~y~F~pd~~GpsGlTPLHIAAs~~g~~~vldaLt 955 (978)
.+.||||+|++.++.++|++|+... ..+++..+..|.||||+|+.. +..+|++.|.
T Consensus 218 ~g~t~L~~A~~~~~~~~v~~Ll~~~-----------g~~~~~~~~~g~t~l~~A~~~-~~~~i~~~Ll 273 (285)
T 1wdy_A 218 RGKTPLILAVEKKHLGLVQRLLEQE-----------HIEINDTDSDGKTALLLAVEL-KLKKIAELLC 273 (285)
T ss_dssp TSCCHHHHHHHTTCHHHHHHHHHSS-----------SCCTTCCCTTSCCHHHHHHHT-TCHHHHHHHH
T ss_pred CCCcHHHHHHHcCCHHHHHHHHhcc-----------CCCccccCCCCCcHHHHHHHc-CcHHHHHHHH
Confidence 3679999999999999999999732 355777889999999999988 8889999994
No 77
>1wdy_A 2-5A-dependent ribonuclease; hydrolase, RNA-binding; HET: 25A; 1.80A {Homo sapiens} SCOP: d.211.1.1
Probab=97.90 E-value=1.7e-05 Score=78.06 Aligned_cols=51 Identities=16% Similarity=0.055 Sum_probs=29.2
Q ss_pred hHHHHHHHcCChhHHHHHHhhcccCCCCCCCccccCCCCCCCCCCchhhhhcccCChhHHHHHh
Q 002028 891 QLLNRAVKMKCRRMVDLLIHYSLTSSNDTPQKYIFPPNLAGPGGITPLHLAACTSDSDDIIDAL 954 (978)
Q Consensus 891 ~LLH~AV~~~s~~mVelLL~~~~~~~~~~~~~y~F~pd~~GpsGlTPLHIAAs~~g~~~vldaL 954 (978)
|+||+|++.++.++|++|+.+. .+++..+..|+||||+|+.. +..+++..|
T Consensus 74 t~L~~A~~~~~~~~v~~Ll~~g------------~~~~~~~~~g~t~L~~A~~~-~~~~~~~~L 124 (285)
T 1wdy_A 74 TPFLLAAIAGSVKLLKLFLSKG------------ADVNECDFYGFTAFMEAAVY-GKVKALKFL 124 (285)
T ss_dssp CHHHHHHHHTCHHHHHHHHHTT------------CCTTCBCTTCCBHHHHHHHT-TCHHHHHHH
T ss_pred CHHHHHHHcCCHHHHHHHHHcC------------CCCCccCcccCCHHHHHHHh-CCHHHHHHH
Confidence 4455555555555555544432 33455566777777777765 566666666
No 78
>3utm_A Tankyrase-1; tankyrase, TNKS, ankryin repeat clusters, WNT signaling, POL ribosylation, transferase-signaling protein complex; 2.00A {Mus musculus}
Probab=97.89 E-value=1.6e-05 Score=80.92 Aligned_cols=87 Identities=22% Similarity=0.221 Sum_probs=66.5
Q ss_pred HHHHHHHhccchHHHHHHHHHHHHhccccCCCccHHHHHHhhhchHHHHHHHcCChhHHHHHHhhcccCCCCCCCccccC
Q 002028 847 KFLLVFSVDRGCCALVKAILDILVEGNLSMDGLSRESLEMLWEIQLLNRAVKMKCRRMVDLLIHYSLTSSNDTPQKYIFP 926 (978)
Q Consensus 847 k~LL~FAverdWcAVvkkLLdiL~~g~v~~~~~s~~~~~~l~e~~LLH~AV~~~s~~mVelLL~~~~~~~~~~~~~y~F~ 926 (978)
+..|-.|+..+-..++++||. ....+...... .+.||||+||+.++.++|++|+.+. .+
T Consensus 25 ~~~L~~A~~~g~~~~v~~ll~---~~~~~~~~~d~------~g~t~L~~A~~~g~~~~v~~Ll~~g------------~~ 83 (351)
T 3utm_A 25 KDELLEAARSGNEEKLMALLT---PLNVNCHASDG------RKSTPLHLAAGYNRVRIVQLLLQHG------------AD 83 (351)
T ss_dssp HHHHHHHHHHTCHHHHHHHCC---TTTTTCCCSST------TCCCHHHHHHHTTCHHHHHHHHHTT------------CC
T ss_pred chhHHHHHHcCCHHHHHHHHH---hcCCCcccCCC------CCCCHHHHHHHcCCHHHHHHHHHcC------------CC
Confidence 356777778887777777774 22333222221 3679999999999999999999874 34
Q ss_pred CCCCCCCCCchhhhhcccCChhHHHHHhh
Q 002028 927 PNLAGPGGITPLHLAACTSDSDDIIDALT 955 (978)
Q Consensus 927 pd~~GpsGlTPLHIAAs~~g~~~vldaLt 955 (978)
++..+..|+||||+||.. |..+|++.|.
T Consensus 84 ~~~~~~~g~t~L~~A~~~-g~~~iv~~Ll 111 (351)
T 3utm_A 84 VHAKDKGGLVPLHNACSY-GHYEVTELLL 111 (351)
T ss_dssp TTCCCTTCCCHHHHHHHT-TCHHHHHHHH
T ss_pred CCccCCCCCcHHHHHHHC-CCHHHHHHHH
Confidence 677788999999999988 8889999994
No 79
>3b7b_A Euchromatic histone-lysine N-methyltransferase 1; ankyrin repeat, alternative splicing, ANK repeat, chromatin regulator, nucleus, phosphorylation; 2.99A {Homo sapiens} SCOP: k.37.1.1 PDB: 3b95_A*
Probab=97.89 E-value=2.6e-05 Score=76.02 Aligned_cols=83 Identities=19% Similarity=0.218 Sum_probs=54.6
Q ss_pred HHHHHhccchHHHHHHHHHHHHhccccCCCccHHHHHHhhhchHHHHHHHcCChhHHHHHHhhcccCCCCCCCccccCCC
Q 002028 849 LLVFSVDRGCCALVKAILDILVEGNLSMDGLSRESLEMLWEIQLLNRAVKMKCRRMVDLLIHYSLTSSNDTPQKYIFPPN 928 (978)
Q Consensus 849 LL~FAverdWcAVvkkLLdiL~~g~v~~~~~s~~~~~~l~e~~LLH~AV~~~s~~mVelLL~~~~~~~~~~~~~y~F~pd 928 (978)
.|.+|+..+...+++.||.. +.+..... ..+.++||+|+++++.+||++|+.+. .+++
T Consensus 114 ~L~~A~~~~~~~~~~~Ll~~----g~~~~~~~------~~g~t~L~~A~~~~~~~~~~~Ll~~g------------~~~~ 171 (237)
T 3b7b_A 114 PMIWATEYKHVDLVKLLLSK----GSDINIRD------NEENICLHWAAFSGCVDIAEILLAAK------------CDLH 171 (237)
T ss_dssp HHHHHHHTTCHHHHHHHHHT----TCCTTCCC------TTSCCHHHHHHHHCCHHHHHHHHTTT------------CCTT
T ss_pred HHHHHHHcCCHHHHHHHHHC----CCCCCccC------CCCCCHHHHHHHCCCHHHHHHHHHcC------------CCCC
Confidence 45566666666666666652 22212111 13568888888888888888888663 3456
Q ss_pred CCCCCCCchhhhhcccCChhHHHHHh
Q 002028 929 LAGPGGITPLHLAACTSDSDDIIDAL 954 (978)
Q Consensus 929 ~~GpsGlTPLHIAAs~~g~~~vldaL 954 (978)
..+..|.||||+|+.. +..+++..|
T Consensus 172 ~~~~~g~t~L~~A~~~-~~~~~v~~L 196 (237)
T 3b7b_A 172 AVNIHGDSPLHIAARE-NRYDCVVLF 196 (237)
T ss_dssp CCCTTCCCHHHHHHHT-TCHHHHHHH
T ss_pred CcCCCCCCHHHHHHHh-CCHhHHHHH
Confidence 6677788888888876 667777777
No 80
>2b0o_E UPLC1; arfgap, structural genomics, structural genomics consortium, SGC, metal binding protein; 2.06A {Homo sapiens}
Probab=97.89 E-value=2.3e-05 Score=82.40 Aligned_cols=85 Identities=18% Similarity=0.126 Sum_probs=64.2
Q ss_pred HHHHHhcc---chHHHHHHHHHHHHhccccCCCccHHHHHHhhhchHHHHHHHcCChhHHHHHHhhcccCCCCCCCcccc
Q 002028 849 LLVFSVDR---GCCALVKAILDILVEGNLSMDGLSRESLEMLWEIQLLNRAVKMKCRRMVDLLIHYSLTSSNDTPQKYIF 925 (978)
Q Consensus 849 LL~FAver---dWcAVvkkLLdiL~~g~v~~~~~s~~~~~~l~e~~LLH~AV~~~s~~mVelLL~~~~~~~~~~~~~y~F 925 (978)
.|-+|+.. +-..+++.||.. +.+.+... ..+.||||+|+..++.+||++||.+. -
T Consensus 193 ~Lh~A~~~~~~~~~~iv~~Ll~~----gadvn~~d------~~G~TpLh~A~~~g~~~~v~~Ll~~g------------a 250 (301)
T 2b0o_E 193 VLHLAVKVANQASLPLVDFIIQN----GGHLDAKA------ADGNTALHYAALYNQPDCLKLLLKGR------------A 250 (301)
T ss_dssp HHHHHHHTCCTTTHHHHHHHHHH----SSCTTCCC------TTCCCHHHHHHHTTCHHHHHHHHHTT------------C
T ss_pred HHHHHHHhcccCcHHHHHHHHhc----CCCCCCCC------CCCCCHHHHHHHcCCHHHHHHHHHcC------------C
Confidence 45566653 677777777764 22222222 14789999999999999999999874 3
Q ss_pred CCCCCCCCCCchhhhhcccCChhHHHHHhhc
Q 002028 926 PPNLAGPGGITPLHLAACTSDSDDIIDALTN 956 (978)
Q Consensus 926 ~pd~~GpsGlTPLHIAAs~~g~~~vldaLt~ 956 (978)
++++.+..|.||||+|+.. +..+|+++|..
T Consensus 251 d~~~~d~~G~TpL~~A~~~-~~~~iv~~Ll~ 280 (301)
T 2b0o_E 251 LVGTVNEAGETALDIARKK-HHKECEELLEQ 280 (301)
T ss_dssp CCSCCCTTSCCHHHHHHHH-TCHHHHHHHHH
T ss_pred CCCCcCCCCCCHHHHHHHc-CCHHHHHHHHH
Confidence 4667788999999999987 88899999944
No 81
>2dzn_A Probable 26S proteasome regulatory subunit P28; ankyrin repeats, A-helical domain, structural genomics, NPPSFA; 2.20A {Saccharomyces cerevisiae} SCOP: d.211.1.1 PDB: 2dzo_A 1ixv_A 1wg0_A
Probab=97.88 E-value=1.3e-05 Score=77.35 Aligned_cols=87 Identities=21% Similarity=0.212 Sum_probs=64.9
Q ss_pred HHHHHHhccchHHHHHHHHHHHHhccccCCCccHHHHHHhhhchHHHHHHHcCChhHHHHHHhhcccCCCCCCCccccCC
Q 002028 848 FLLVFSVDRGCCALVKAILDILVEGNLSMDGLSRESLEMLWEIQLLNRAVKMKCRRMVDLLIHYSLTSSNDTPQKYIFPP 927 (978)
Q Consensus 848 ~LL~FAverdWcAVvkkLLdiL~~g~v~~~~~s~~~~~~l~e~~LLH~AV~~~s~~mVelLL~~~~~~~~~~~~~y~F~p 927 (978)
..|.+|+..+...+++.||..-.. .+..... ..+.++||+|++.++.++|++|+.+. .++
T Consensus 74 t~L~~A~~~~~~~~~~~Ll~~g~~--~~~~~~~------~~g~t~L~~A~~~~~~~~~~~Ll~~g------------~~~ 133 (228)
T 2dzn_A 74 TPFHIACSVGNLEVVKSLYDRPLK--PDLNKIT------NQGVTCLHLAVGKKWFEVSQFLIENG------------ASV 133 (228)
T ss_dssp CHHHHHHHHCCHHHHHHHHSSSSC--CCTTCCC------TTCCCHHHHHHHTTCHHHHHHHHHTT------------CCS
T ss_pred CHHHHHHHcCCHHHHHHHHhCCCC--cccccCC------cCCCCHHHHHHHcCCHhHHHHHHHcC------------CCc
Confidence 457778888888777777653211 2222211 13679999999999999999999763 456
Q ss_pred CCCCCCCCchhhhhcccCChhHHHHHhh
Q 002028 928 NLAGPGGITPLHLAACTSDSDDIIDALT 955 (978)
Q Consensus 928 d~~GpsGlTPLHIAAs~~g~~~vldaLt 955 (978)
+..+..|.||||+|+.. +..++++.|.
T Consensus 134 ~~~~~~g~t~L~~A~~~-~~~~~v~~Ll 160 (228)
T 2dzn_A 134 RIKDKFNQIPLHRAASV-GSLKLIELLC 160 (228)
T ss_dssp CCCCTTSCCHHHHHHHT-TCHHHHHHHH
T ss_pred cccCCCCCCHHHHHHHc-CCHHHHHHHH
Confidence 77788999999999987 8889999994
No 82
>2rfa_A Transient receptor potential cation channel subfa member 6; TRPV6, ankyrin reapeat, ANK RE calcium channel, calcium transport, calmodulin-binding; 1.70A {Mus musculus}
Probab=97.88 E-value=1.7e-05 Score=77.28 Aligned_cols=90 Identities=21% Similarity=0.177 Sum_probs=65.1
Q ss_pred HHHHHHhccchHHHHHHHHHHHHhccccCCCccHHH-HH------HhhhchHHHHHHHcCChhHHHHHHhhcccCCCCCC
Q 002028 848 FLLVFSVDRGCCALVKAILDILVEGNLSMDGLSRES-LE------MLWEIQLLNRAVKMKCRRMVDLLIHYSLTSSNDTP 920 (978)
Q Consensus 848 ~LL~FAverdWcAVvkkLLdiL~~g~v~~~~~s~~~-~~------~l~e~~LLH~AV~~~s~~mVelLL~~~~~~~~~~~ 920 (978)
..|-+|+.++-..+++.||..-. +........ +. -..+.|+||+|++.++.++|++|+.+.
T Consensus 77 t~L~~A~~~~~~~~v~~Ll~~g~----~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g-------- 144 (232)
T 2rfa_A 77 TALHIAVINQNVNLVRALLARGA----SVSARATGSVFHYRPHNLIYYGEHPLSFAACVGSEEIVRLLIEHG-------- 144 (232)
T ss_dssp CHHHHHHHTTCHHHHHHHHHTTC----CTTCCCCSGGGSCCTTCSCCCCSSHHHHHHHHTCHHHHHHHHHTT--------
T ss_pred CHHHHHHHcCCHHHHHHHHhCCC----CCCcccCCcceeecccccccCCCCHHHHHHHcCCHHHHHHHHHCC--------
Confidence 46788999999999998887422 211111000 00 003679999999999999999999874
Q ss_pred CccccCCCCCCCCCCchhhhhcccCChhHHH----HHh
Q 002028 921 QKYIFPPNLAGPGGITPLHLAACTSDSDDII----DAL 954 (978)
Q Consensus 921 ~~y~F~pd~~GpsGlTPLHIAAs~~g~~~vl----daL 954 (978)
.+++..+..|.||||+|+.. +..+++ +.|
T Consensus 145 ----a~~~~~d~~g~t~L~~A~~~-~~~~~~~~i~~~L 177 (232)
T 2rfa_A 145 ----ADIRAQDSLGNTVLHILILQ-PNKTFACQMYNLL 177 (232)
T ss_dssp ----CCTTCCCTTSCCHHHHHHTC-SCHHHHHHHHHHH
T ss_pred ----CCCCCCCCCCCCHHHHHHHc-CChHHHHHHHHHH
Confidence 45777889999999999988 555555 777
No 83
>3aji_A 26S proteasome non-ATPase regulatory subunit 10; gankyrin, S6 ATPase, P-benzoyl-L-phenylalanine, PBPA, amber suppression; HET: PBF; 2.05A {Mus musculus} PDB: 2dvw_A 2dwz_A* 1tr4_A 1uoh_A 1qym_A
Probab=97.87 E-value=2.5e-05 Score=75.83 Aligned_cols=28 Identities=21% Similarity=0.277 Sum_probs=17.6
Q ss_pred CCCCCCCCCCchhhhhcccCChhHHHHHh
Q 002028 926 PPNLAGPGGITPLHLAACTSDSDDIIDAL 954 (978)
Q Consensus 926 ~pd~~GpsGlTPLHIAAs~~g~~~vldaL 954 (978)
+++..+..|.||||+|+.. +..+++..|
T Consensus 131 ~~~~~~~~g~t~L~~A~~~-~~~~~v~~L 158 (231)
T 3aji_A 131 NPDAKDHYDATAMHRAAAK-GNLKMVHIL 158 (231)
T ss_dssp CTTCCCTTSCCHHHHHHHH-TCHHHHHHH
T ss_pred CCCCcCCCCCcHHHHHHHc-CCHHHHHHH
Confidence 3445566677777777665 556666666
No 84
>1yyh_A HN1;, notch 1, ankyrin domain; ankyrin repeats, cell cycle,transcription; 1.90A {Homo sapiens} PDB: 2he0_A 2f8x_K 3nbn_B 3v79_K* 1ot8_A
Probab=97.85 E-value=2.5e-05 Score=78.02 Aligned_cols=86 Identities=14% Similarity=0.029 Sum_probs=66.9
Q ss_pred HHHHHHhccchHHHHHHHHHHHHhccccCCCccHHHHHHhhhchHHHHHHHcCChhHHHHHHhhcccCCCCCCCccccCC
Q 002028 848 FLLVFSVDRGCCALVKAILDILVEGNLSMDGLSRESLEMLWEIQLLNRAVKMKCRRMVDLLIHYSLTSSNDTPQKYIFPP 927 (978)
Q Consensus 848 ~LL~FAverdWcAVvkkLLdiL~~g~v~~~~~s~~~~~~l~e~~LLH~AV~~~s~~mVelLL~~~~~~~~~~~~~y~F~p 927 (978)
..|-+|+.++-..+++.||.. +.+..... -.+.|+||+|++.++.+||++|+.+. -++
T Consensus 159 t~L~~A~~~~~~~~v~~Ll~~----ga~~~~~~------~~g~tpL~~A~~~~~~~~v~~Ll~~g------------a~~ 216 (253)
T 1yyh_A 159 SALHWAAAVNNVDAAVVLLKN----GANKDMQN------NREETPLFLAAREGSYETAKVLLDHF------------ANR 216 (253)
T ss_dssp BHHHHHHHHTCHHHHHHHHHT----TCCTTCCC------TTSCCHHHHHHHHTCHHHHHHHHHTT------------CCT
T ss_pred CHHHHHHHcCCHHHHHHHHHc----CCCCCCcC------CCCCCHHHHHHHCCCHHHHHHHHHcC------------CCc
Confidence 356677777777777777753 23322222 14789999999999999999999884 346
Q ss_pred CCCCCCCCchhhhhcccCChhHHHHHhhc
Q 002028 928 NLAGPGGITPLHLAACTSDSDDIIDALTN 956 (978)
Q Consensus 928 d~~GpsGlTPLHIAAs~~g~~~vldaLt~ 956 (978)
++.+..|.||||+|+.. |..+|+..|..
T Consensus 217 ~~~d~~g~tpl~~A~~~-g~~~i~~~l~~ 244 (253)
T 1yyh_A 217 DITDHMDRLPRDIAQER-MHHDIVRLLDL 244 (253)
T ss_dssp TCCCTTCCCHHHHHHHT-TCHHHHHHHHC
T ss_pred cccccCCCCHHHHHHHc-CCHHHHHHHHH
Confidence 77789999999999988 99999999955
No 85
>2l6b_A NR1C; ankyrin, consensus, repeat protein, ising model, DE NOV; NMR {Escherichia coli}
Probab=97.85 E-value=1.4e-05 Score=70.31 Aligned_cols=55 Identities=29% Similarity=0.267 Sum_probs=47.2
Q ss_pred hchHHHHHHHcCChhHHHHHHhhcccCCCCCCCccccCCCCCCCCCCchhhhhcccCChhHHHHHhhc
Q 002028 889 EIQLLNRAVKMKCRRMVDLLIHYSLTSSNDTPQKYIFPPNLAGPGGITPLHLAACTSDSDDIIDALTN 956 (978)
Q Consensus 889 e~~LLH~AV~~~s~~mVelLL~~~~~~~~~~~~~y~F~pd~~GpsGlTPLHIAAs~~g~~~vldaLt~ 956 (978)
+.++||+||+.++.++|++|+... .+++..+..|+||||+|+.. +..+++..|.+
T Consensus 9 g~t~L~~A~~~~~~~~~~~Ll~~g------------~~~~~~d~~g~t~L~~A~~~-~~~~~~~~Ll~ 63 (115)
T 2l6b_A 9 GNTPLHNAAKNGHAEEVKKLLSKG------------ADVNARSKDGNTPLHLAAKN-GHAEIVKLLLA 63 (115)
T ss_dssp SCCHHHHHHHHTCHHHHHHHTTTT------------CCSSCCCSSSCCTTHHHHTT-TCHHHHHHHTT
T ss_pred CCCHHHHHHHcCCHHHHHHHHHcC------------CCCCCcCCCCCCHHHHHHHc-CcHHHHHHHHH
Confidence 679999999999999999999763 34666788999999999987 78889998843
No 86
>2f8y_A Notch homolog 1, translocation-associated (drosophila); ankyrin repeats, transcription; 1.55A {Homo sapiens} PDB: 2qc9_A 1ymp_A
Probab=97.83 E-value=3.9e-05 Score=74.08 Aligned_cols=86 Identities=14% Similarity=0.044 Sum_probs=66.6
Q ss_pred HHHHHHhccchHHHHHHHHHHHHhccccCCCccHHHHHHhhhchHHHHHHHcCChhHHHHHHhhcccCCCCCCCccccCC
Q 002028 848 FLLVFSVDRGCCALVKAILDILVEGNLSMDGLSRESLEMLWEIQLLNRAVKMKCRRMVDLLIHYSLTSSNDTPQKYIFPP 927 (978)
Q Consensus 848 ~LL~FAverdWcAVvkkLLdiL~~g~v~~~~~s~~~~~~l~e~~LLH~AV~~~s~~mVelLL~~~~~~~~~~~~~y~F~p 927 (978)
..|-+|+.++-..+++.||.- +.+..... ..+.|+||.|++.++.+||++|+.+. -++
T Consensus 127 t~L~~A~~~~~~~~v~~Ll~~----g~~~~~~~------~~g~t~L~~A~~~~~~~~v~~Ll~~g------------a~~ 184 (223)
T 2f8y_A 127 SALHWAAAVNNVDAAVVLLKN----GANKDMQN------NREETPLFLAAREGSYETAKVLLDHF------------ANR 184 (223)
T ss_dssp BHHHHHHHTTCHHHHHHHHHT----TCCTTCCC------TTCCCHHHHHHHHTCHHHHHHHHHTT------------CCT
T ss_pred cHHHHHHHcCCHHHHHHHHHc----CCCCCCcC------CCCcCHHHHHHHcCCHHHHHHHHHcC------------CCC
Confidence 456778888888888887764 22322222 14679999999999999999999874 346
Q ss_pred CCCCCCCCchhhhhcccCChhHHHHHhhc
Q 002028 928 NLAGPGGITPLHLAACTSDSDDIIDALTN 956 (978)
Q Consensus 928 d~~GpsGlTPLHIAAs~~g~~~vldaLt~ 956 (978)
+..+..|.||||+|+.. +..+|++.|.+
T Consensus 185 ~~~~~~g~t~l~~A~~~-~~~~i~~~L~~ 212 (223)
T 2f8y_A 185 DITDHMDRLPRDIAQER-MHHDIVRLLDE 212 (223)
T ss_dssp TCCCTTCCCHHHHHHHT-TCHHHHHHHHH
T ss_pred ccccccCCCHHHHHHHh-cchHHHHHHHH
Confidence 67788999999999987 88899999943
No 87
>4g8k_A 2-5A-dependent ribonuclease; ankyrin-repeat domain, single-stranded RNA, hydrolase; 2.40A {Homo sapiens} PDB: 4g8l_A*
Probab=97.82 E-value=4.8e-05 Score=78.79 Aligned_cols=99 Identities=20% Similarity=0.130 Sum_probs=71.3
Q ss_pred HHHHHHHhccchHHHHHHHHHHHHhccccCCCccHHHHHHhhhchHHHHHHHcCChhHHHHHHhhccc--CCCCCC----
Q 002028 847 KFLLVFSVDRGCCALVKAILDILVEGNLSMDGLSRESLEMLWEIQLLNRAVKMKCRRMVDLLIHYSLT--SSNDTP---- 920 (978)
Q Consensus 847 k~LL~FAverdWcAVvkkLLdiL~~g~v~~~~~s~~~~~~l~e~~LLH~AV~~~s~~mVelLL~~~~~--~~~~~~---- 920 (978)
..+|..|+.++-..+|+.||+- | .+...... -.+.||||+||+.++.+||++||.+... ..+...
T Consensus 26 ~t~L~~Av~~g~~~~V~~LL~~---G-advn~~~~-----~~g~TpLh~A~~~g~~~iv~~Ll~~ga~~~~~~~~~~~~~ 96 (337)
T 4g8k_A 26 NHLLIKAVQNEDVDLVQQLLEG---G-ANVNFQEE-----EGGWTPLHNAVQMSREDIVELLLRHGADPVLRKKNGATPF 96 (337)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHH---T-CCTTCCCT-----TTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHH
T ss_pred ChHHHHHHHcCCHHHHHHHHHC---C-CCCCccCC-----CCCcCHHHHHHHcCCHHHHHHHHHcCCchhhhccCCCchh
Confidence 5689999999999999999974 2 22222111 1368999999999999999999997641 111111
Q ss_pred ---------------CccccCCCCCCCCCCchhhhhcccCChhHHHHHhh
Q 002028 921 ---------------QKYIFPPNLAGPGGITPLHLAACTSDSDDIIDALT 955 (978)
Q Consensus 921 ---------------~~y~F~pd~~GpsGlTPLHIAAs~~g~~~vldaLt 955 (978)
..+..+++..+..|+||||+|+.. +..+++..|.
T Consensus 97 ~~~~~~~~~~~~~~~~~~~~~~~~~d~~g~t~l~~A~~~-~~~~~~~~ll 145 (337)
T 4g8k_A 97 ILAAIAGSVKLLKLFLSKGADVNECDFYGFTAFMEAAVY-GKVKALKFLY 145 (337)
T ss_dssp HHHHHHTCHHHHHHHHTTTCCTTCBCTTCCBHHHHHHHT-TCHHHHHHHH
T ss_pred HHHHhcccchhhHHhhhccchhhhhccCCCCHHHHHHHc-CcHHHHHHHH
Confidence 012334566789999999999987 7778888773
No 88
>2zgd_A 3 repeat synthetic ankyrin; ankyrin repeat, hydroxylated, de novo protein; 1.90A {Synthetic} PDB: 2zgg_A 2xen_A
Probab=97.82 E-value=2e-05 Score=69.90 Aligned_cols=55 Identities=24% Similarity=0.180 Sum_probs=47.3
Q ss_pred hhchHHHHHHHcCChhHHHHHHhhcccCCCCCCCccccCCCCCCCCCCchhhhhcccCChhHHHHHhh
Q 002028 888 WEIQLLNRAVKMKCRRMVDLLIHYSLTSSNDTPQKYIFPPNLAGPGGITPLHLAACTSDSDDIIDALT 955 (978)
Q Consensus 888 ~e~~LLH~AV~~~s~~mVelLL~~~~~~~~~~~~~y~F~pd~~GpsGlTPLHIAAs~~g~~~vldaLt 955 (978)
.+.++||+||+.++.++|++|+... .+++..+..|.||||+||.. +..+++..|.
T Consensus 23 ~g~t~L~~A~~~g~~~~v~~Ll~~g------------~~i~~~d~~g~tpLh~A~~~-~~~~~v~~Ll 77 (110)
T 2zgd_A 23 DLGKKLLEAARAGQDDEVRILMANG------------ADVAAKDKNGSTPLHLAARN-GHLEVVKLLL 77 (110)
T ss_dssp CHHHHHHHHHHHTCHHHHHHHHHTT------------CCTTCCCTTCCCHHHHHHHT-TCHHHHHHHH
T ss_pred ccchHHHHHHHcCCHHHHHHHHHcC------------CCCCccCCCCCCHHHHHHHc-CCHHHHHHHH
Confidence 3569999999999999999999763 34666788999999999987 7888999883
No 89
>4g8k_A 2-5A-dependent ribonuclease; ankyrin-repeat domain, single-stranded RNA, hydrolase; 2.40A {Homo sapiens} PDB: 4g8l_A*
Probab=97.81 E-value=2.7e-05 Score=80.67 Aligned_cols=55 Identities=25% Similarity=0.151 Sum_probs=42.5
Q ss_pred hchHHHHHHHcCChhHHHHHHhhcccCCCCCCCccccCCCCCCCCCCchhhhhcccCChhHHHHHhh
Q 002028 889 EIQLLNRAVKMKCRRMVDLLIHYSLTSSNDTPQKYIFPPNLAGPGGITPLHLAACTSDSDDIIDALT 955 (978)
Q Consensus 889 e~~LLH~AV~~~s~~mVelLL~~~~~~~~~~~~~y~F~pd~~GpsGlTPLHIAAs~~g~~~vldaLt 955 (978)
+.|+||+||+.++.++|++|+.+. ..+++..+..|+||||+||.. |..+|+++|.
T Consensus 239 g~t~L~~a~~~~~~~~v~~Ll~~~-----------~~~vn~~d~~G~TpL~~A~~~-g~~~iv~~Ll 293 (337)
T 4g8k_A 239 GKTPLILAVEKKHLGLVQRLLEQE-----------HIEINDTDSDGKTALLLAVEL-KLKKIAELLC 293 (337)
T ss_dssp GCCHHHHHHHTTCHHHHHHHHTST-----------TCCTTCBCTTSCBHHHHHHHT-TCHHHHHHHH
T ss_pred CCCHHHHHHHhhhhHHHHHHHHhc-----------CCcccCcCCCCCCHHHHHHHc-CCHHHHHHHH
Confidence 568888888888888888888643 345666778888888888876 7778888883
No 90
>3lvq_E ARF-GAP with SH3 domain, ANK repeat and PH domain containing protein 3, ADP-ribosylation...; GDP, ASAP3, UPLC1, linkers, alternat splicing; HET: GDP; 3.38A {Homo sapiens} PDB: 3lvr_E*
Probab=97.81 E-value=2.4e-05 Score=87.36 Aligned_cols=86 Identities=17% Similarity=0.148 Sum_probs=66.3
Q ss_pred HHHHHHhc---cchHHHHHHHHHHHHhccccCCCccHHHHHHhhhchHHHHHHHcCChhHHHHHHhhcccCCCCCCCccc
Q 002028 848 FLLVFSVD---RGCCALVKAILDILVEGNLSMDGLSRESLEMLWEIQLLNRAVKMKCRRMVDLLIHYSLTSSNDTPQKYI 924 (978)
Q Consensus 848 ~LL~FAve---rdWcAVvkkLLdiL~~g~v~~~~~s~~~~~~l~e~~LLH~AV~~~s~~mVelLL~~~~~~~~~~~~~y~ 924 (978)
-.|-+||. .+-..+++.||.- +.+.+.... .+.||||+|+..++.++|++||.+.
T Consensus 173 t~Lh~A~~~a~~g~~~~v~~Ll~~----ga~vn~~d~------~g~TpLh~A~~~g~~~~v~~Ll~~g------------ 230 (497)
T 3lvq_E 173 LVLHLAVKVANQASLPLVDFIIQN----GGHLDAKAA------DGNTALHYAALYNQPDCLKLLLKGR------------ 230 (497)
T ss_dssp CHHHHHHHTCCTTTHHHHHHHHHH----SCCTTCCCS------SSCCHHHHHTTTTCHHHHHHHHHTC------------
T ss_pred hHHHHHHHhcccccHHHHHHHHHc----CCCCCccCC------CCCcHHHHHHHcCCHHHHHHHHHcC------------
Confidence 35666754 7778888888773 223332221 4789999999999999999999874
Q ss_pred cCCCCCCCCCCchhhhhcccCChhHHHHHhhc
Q 002028 925 FPPNLAGPGGITPLHLAACTSDSDDIIDALTN 956 (978)
Q Consensus 925 F~pd~~GpsGlTPLHIAAs~~g~~~vldaLt~ 956 (978)
-++++.+..|+||||+|+.. +..+++++|..
T Consensus 231 a~~~~~d~~g~tpl~~A~~~-~~~~~~~~Ll~ 261 (497)
T 3lvq_E 231 ALVGTVNEAGETALDIARKK-HHKECEELLEQ 261 (497)
T ss_dssp CCCSCCCTTCCCHHHHHHHT-TCHHHHHHHHH
T ss_pred CCCCCcCCCCCCHHHHHHHc-CCHHHHHHHHH
Confidence 34777899999999999977 88899999943
No 91
>1bi7_B P16INK4A, MTS1, multiple tumor suppressor; cyclin dependent kinase, cyclin dependent kinase inhibitory protein, CDK, cell cycle; 3.40A {Homo sapiens} SCOP: d.211.1.1 PDB: 1a5e_A 1dc2_A 2a5e_A
Probab=97.80 E-value=1.1e-05 Score=74.95 Aligned_cols=83 Identities=25% Similarity=0.317 Sum_probs=64.9
Q ss_pred HHHHHHhccchHHHHHHHHHHHHhccccCCCccHHHHHHhhhchHHHHHHHcCChhHHHHHHhhcccCCCCCCCccccCC
Q 002028 848 FLLVFSVDRGCCALVKAILDILVEGNLSMDGLSRESLEMLWEIQLLNRAVKMKCRRMVDLLIHYSLTSSNDTPQKYIFPP 927 (978)
Q Consensus 848 ~LL~FAverdWcAVvkkLLdiL~~g~v~~~~~s~~~~~~l~e~~LLH~AV~~~s~~mVelLL~~~~~~~~~~~~~y~F~p 927 (978)
..|-+|+..+...+++.||.. +.+...... .+.|+||+|+ .++.+||++||.+. .++
T Consensus 14 t~L~~A~~~g~~~~v~~Ll~~----g~~~~~~~~------~g~t~L~~A~-~~~~~~v~~Ll~~g------------~~~ 70 (156)
T 1bi7_B 14 DWLATAAARGRVEEVRALLEA----GANPNAPNS------YGRRPIQVMM-MGSARVAELLLLHG------------AEP 70 (156)
T ss_dssp THHHHHHHHTCHHHHHHHHTT----TCCTTCCCS------SSCCTTTSSC-TTCHHHHHHHHTTT------------CCC
T ss_pred HHHHHHHHcCCHHHHHHHHHc----CCCCCCCCC------CCCCHHHHHH-cCCHHHHHHHHHcC------------CCC
Confidence 568888999999999988853 223222221 4679999995 89999999999763 346
Q ss_pred CCCCCCCCc-hhhhhcccCChhHHHHHh
Q 002028 928 NLAGPGGIT-PLHLAACTSDSDDIIDAL 954 (978)
Q Consensus 928 d~~GpsGlT-PLHIAAs~~g~~~vldaL 954 (978)
+..+..|+| |||+||.. +..+++..|
T Consensus 71 ~~~d~~g~ttpL~~A~~~-~~~~~v~~L 97 (156)
T 1bi7_B 71 NCADPATLTRPVHDAARE-GFLDTLVVL 97 (156)
T ss_dssp CCCCTTTCCCHHHHHHHH-TCHHHHHHH
T ss_pred CCcCCCCCcHHHHHHHHC-CCHHHHHHH
Confidence 777889999 99999987 888899988
No 92
>3d9h_A CDNA FLJ77766, highly similar to HOMO sapiens ankyrin repeat and SOCS box-containing...; ASB9, ANK repeat, L-shaped, structural protein; 2.20A {Homo sapiens}
Probab=97.80 E-value=3.5e-05 Score=79.09 Aligned_cols=20 Identities=25% Similarity=0.356 Sum_probs=11.9
Q ss_pred CCchhhhhcccCChhHHHHHh
Q 002028 934 GITPLHLAACTSDSDDIIDAL 954 (978)
Q Consensus 934 GlTPLHIAAs~~g~~~vldaL 954 (978)
|.||||+||.. +..+++..|
T Consensus 157 g~t~L~~A~~~-g~~~~v~~L 176 (285)
T 3d9h_A 157 LASPIHEAARR-GHVECVNSL 176 (285)
T ss_dssp TSCHHHHHHHH-TCHHHHHHH
T ss_pred CCCHHHHHHHc-CCHHHHHHH
Confidence 56666666655 555555555
No 93
>3ehr_A Osteoclast-stimulating factor 1; beta barrel, helix-turn-helix, SH3, ankyrin repeat, signaling protein, ANK repeat, cytoplasm, phosphoprotein; 1.95A {Homo sapiens} PDB: 3ehq_A
Probab=97.79 E-value=1.6e-05 Score=77.66 Aligned_cols=87 Identities=13% Similarity=0.160 Sum_probs=63.0
Q ss_pred HHHHHHhccchHHHHHHHHHHHHhccccCCCccHHHHHHhhhchHHHHHHHcCChhHHHHHHhhcccCCCCCCCccccCC
Q 002028 848 FLLVFSVDRGCCALVKAILDILVEGNLSMDGLSRESLEMLWEIQLLNRAVKMKCRRMVDLLIHYSLTSSNDTPQKYIFPP 927 (978)
Q Consensus 848 ~LL~FAverdWcAVvkkLLdiL~~g~v~~~~~s~~~~~~l~e~~LLH~AV~~~s~~mVelLL~~~~~~~~~~~~~y~F~p 927 (978)
..|-+|+..+-..+++.||.. ++.+...... .+.|+||+|++.++.+||++||.+. -++
T Consensus 108 t~L~~A~~~~~~~~v~~Ll~~---~g~~~~~~d~------~g~tpL~~A~~~~~~~~v~~Ll~~g------------a~~ 166 (222)
T 3ehr_A 108 TALYWACHGGHKDIVEMLFTQ---PNIELNQQNK------LGDTALHAAAWKGYADIVQLLLAKG------------ART 166 (222)
T ss_dssp CHHHHHHHTTCHHHHHHHTTS---TTCCCCCCCT------TSCCHHHHHHHHTCHHHHHHHHHHT------------CCS
T ss_pred CHHHHHHHcCCHHHHHHHHcC---CCCCccccCC------CCCCHHHHHHHcCCHHHHHHHHHcC------------CCC
Confidence 456778888888888877652 1333332221 4789999999999999999999874 346
Q ss_pred CCCCCCCCchhhhhcccCChhHHHHHhhc
Q 002028 928 NLAGPGGITPLHLAACTSDSDDIIDALTN 956 (978)
Q Consensus 928 d~~GpsGlTPLHIAAs~~g~~~vldaLt~ 956 (978)
++.+..|.||||+|+.. +..+++..|..
T Consensus 167 ~~~~~~g~t~l~~A~~~-~~~~~l~~l~~ 194 (222)
T 3ehr_A 167 DLRNIEKKLAFDMATNA-ACASLLKKKQG 194 (222)
T ss_dssp CCCCTTSCCHHHHCCSH-HHHHHHC----
T ss_pred ccccCCCCCHHHHhcch-hHHHHHHHHhc
Confidence 77788999999999985 77777777743
No 94
>1ycs_B 53BP2, P53BP2; ankyrin repeats, SH3, tumor suppressor, multigene family, nuclear protein, phosphorylation, disease mutation, polymorphism; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.211.1.1 PDB: 4a63_B
Probab=97.77 E-value=4.2e-05 Score=76.31 Aligned_cols=87 Identities=11% Similarity=0.037 Sum_probs=64.5
Q ss_pred HHHHHHhccchHHHHHHHHHHHHhccccCCCccHHHHHHhhhchHHHHHHHcCChhHHHHHHhhcccCCCCCCCccccCC
Q 002028 848 FLLVFSVDRGCCALVKAILDILVEGNLSMDGLSRESLEMLWEIQLLNRAVKMKCRRMVDLLIHYSLTSSNDTPQKYIFPP 927 (978)
Q Consensus 848 ~LL~FAverdWcAVvkkLLdiL~~g~v~~~~~s~~~~~~l~e~~LLH~AV~~~s~~mVelLL~~~~~~~~~~~~~y~F~p 927 (978)
-.|-+|+.++...+++.||.. +.+.+.... .+.|+||+|++.++.+||++||.+. -++
T Consensus 72 t~L~~A~~~g~~~~v~~Ll~~----ga~~~~~d~------~g~tpL~~A~~~~~~~~v~~Ll~~g------------a~~ 129 (239)
T 1ycs_B 72 TALHNAVCAGHTEIVKFLVQF----GVNVNAADS------DGWTPLHCAASCNNVQVCKFLVESG------------AAV 129 (239)
T ss_dssp CHHHHHHHHTCHHHHHHHHHH----TCCTTCCCT------TCCCHHHHHHHTTCHHHHHHHHHTT------------CCT
T ss_pred CHHHHHHHcCCHHHHHHHHHc----CCCCCccCC------CCCCHHHHHHHcCCHHHHHHHHHcC------------CCc
Confidence 457788999999999998874 222222221 4789999999999999999999875 235
Q ss_pred CCCCCCCC-chhhhhcc-cCChhHHHHHhhc
Q 002028 928 NLAGPGGI-TPLHLAAC-TSDSDDIIDALTN 956 (978)
Q Consensus 928 d~~GpsGl-TPLHIAAs-~~g~~~vldaLt~ 956 (978)
+..+..|. ||||+|.. ..|..+++..|..
T Consensus 130 ~~~~~~~~~t~l~~a~~~~~g~~~~~~~Ll~ 160 (239)
T 1ycs_B 130 FAMTYSDMQTAADKCEEMEEGYTQCSQFLYG 160 (239)
T ss_dssp TCCCSSSCCCHHHHCCSSSTTCCCHHHHHHH
T ss_pred ceecCCCCcchHHHHHHhhhccHHHHHHHHH
Confidence 55554454 99999953 4477899999943
No 95
>3ui2_A Signal recognition particle 43 kDa protein, chlor; ankyrin repeat, chromodomain, aromatic CAGE, signal recognit particle, protein targeting; 3.18A {Arabidopsis thaliana} PDB: 1x3q_A 2hug_A
Probab=97.76 E-value=2.9e-05 Score=78.19 Aligned_cols=88 Identities=19% Similarity=0.235 Sum_probs=64.2
Q ss_pred HHHHHHhccchHHHHHHHHHHHHhccccCCCccHHHHHHhhhchHHHHHHHcCChhHHHHHHhhcccCCCCCCCccccCC
Q 002028 848 FLLVFSVDRGCCALVKAILDILVEGNLSMDGLSRESLEMLWEIQLLNRAVKMKCRRMVDLLIHYSLTSSNDTPQKYIFPP 927 (978)
Q Consensus 848 ~LL~FAverdWcAVvkkLLdiL~~g~v~~~~~s~~~~~~l~e~~LLH~AV~~~s~~mVelLL~~~~~~~~~~~~~y~F~p 927 (978)
-.|-+|+..+-..+++.||.. +.+..... --.+.||||+|++.++.+||++||.+. -++
T Consensus 79 t~L~~A~~~g~~~~v~~Ll~~----ga~~~~~~-----~~~g~t~L~~A~~~g~~~~v~~Ll~~g------------a~~ 137 (244)
T 3ui2_A 79 TALLFVAGLGSDKCVRLLAEA----GADLDHRD-----MRGGLTALHMAAGYVRPEVVEALVELG------------ADI 137 (244)
T ss_dssp BHHHHHHHHTCHHHHHHHHHT----TCCTTCCC-----SSSCCCHHHHHHHTTCHHHHHHHHHTT------------CCT
T ss_pred CHHHHHHHCCCHHHHHHHHHc----CCCCCcCC-----CCCCCCHHHHHHHcCCHHHHHHHHHCC------------CCC
Confidence 457788888999999988864 22222121 013789999999999999999999874 346
Q ss_pred CCCCCCCCchhhhhccc---------------CChhHHHHHhhc
Q 002028 928 NLAGPGGITPLHLAACT---------------SDSDDIIDALTN 956 (978)
Q Consensus 928 d~~GpsGlTPLHIAAs~---------------~g~~~vldaLt~ 956 (978)
+..+..|+||||+|+.. .|..+|++.|..
T Consensus 138 ~~~d~~g~t~l~~A~~~~~~~~~~~~l~~a~~~g~~~iv~~L~~ 181 (244)
T 3ui2_A 138 EVEDERGLTALELAREILKTTPKGNPMQFGRRIGLEKVINVLEG 181 (244)
T ss_dssp TCCCTTCCCHHHHHHHHHTTCCCSSHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCCCCCcHHHHHHHHHhccCCCCHHHHHHHcChHHHHHHHHH
Confidence 66788899999998732 256777777743
No 96
>3eu9_A Huntingtin-interacting protein 14; epigenetics, ankyrin repeats, methyllyine binding, huntingti interacting protein 14, acyltransferase, ANK repeat; HET: HIS; 1.99A {Homo sapiens}
Probab=97.76 E-value=4.5e-05 Score=73.42 Aligned_cols=58 Identities=21% Similarity=0.167 Sum_probs=46.6
Q ss_pred hchHHHHHHHcCChhHHHHHHhhcccCCCCCCCccccCCCCCCCCCCchhhhhcccCChhHHHHHhhcCcc
Q 002028 889 EIQLLNRAVKMKCRRMVDLLIHYSLTSSNDTPQKYIFPPNLAGPGGITPLHLAACTSDSDDIIDALTNDPQ 959 (978)
Q Consensus 889 e~~LLH~AV~~~s~~mVelLL~~~~~~~~~~~~~y~F~pd~~GpsGlTPLHIAAs~~g~~~vldaLt~DP~ 959 (978)
+.|+||+||+.++.+||++|+.+. .+++..+..|.||||+|+.. +..+++..|.+...
T Consensus 177 g~t~L~~A~~~~~~~~v~~Ll~~g------------~~~~~~~~~g~t~l~~A~~~-~~~~~v~~L~~~~~ 234 (240)
T 3eu9_A 177 KNTALHWAVLAGNTTVISLLLEAG------------ANVDAQNIKGESALDLAKQR-KNVWMINHLQEARQ 234 (240)
T ss_dssp CCCHHHHHHHHTCHHHHHHHHHHT------------CCTTCBCTTSCBHHHHHHHT-TCHHHHHHHHHHC-
T ss_pred CCcHHHHHHHcCCHHHHHHHHHcC------------CCCCCcCCCCCCHHHHHHHc-CcHHHHHHHHHhhh
Confidence 458999999999999999999773 44667788899999999888 78889998855433
No 97
>3b7b_A Euchromatic histone-lysine N-methyltransferase 1; ankyrin repeat, alternative splicing, ANK repeat, chromatin regulator, nucleus, phosphorylation; 2.99A {Homo sapiens} SCOP: k.37.1.1 PDB: 3b95_A*
Probab=97.76 E-value=4.7e-05 Score=74.17 Aligned_cols=54 Identities=24% Similarity=0.248 Sum_probs=34.0
Q ss_pred chHHHHHHHcCChhHHHHHHhhcccCCCCCCCccccCCCCCCCCCCchhhhhcccCChhHHHHHhh
Q 002028 890 IQLLNRAVKMKCRRMVDLLIHYSLTSSNDTPQKYIFPPNLAGPGGITPLHLAACTSDSDDIIDALT 955 (978)
Q Consensus 890 ~~LLH~AV~~~s~~mVelLL~~~~~~~~~~~~~y~F~pd~~GpsGlTPLHIAAs~~g~~~vldaLt 955 (978)
.++||+|++.++.++|++|+.+. ..+++..+..|+||||+|+.. +..++++.|.
T Consensus 78 ~t~L~~A~~~~~~~~~~~Ll~~~-----------~~~~~~~~~~g~t~L~~A~~~-~~~~~~~~Ll 131 (237)
T 3b7b_A 78 STCLHLAAKKGHYEVVQYLLSNG-----------QMDVNCQDDGGWTPMIWATEY-KHVDLVKLLL 131 (237)
T ss_dssp CCHHHHHHHTTCHHHHHHHHTTT-----------CCCTTCCCTTSCCHHHHHHHT-TCHHHHHHHH
T ss_pred CcHHHHHHHcCCHHHHHHHHhCC-----------CCCcccCCCCCCCHHHHHHHc-CCHHHHHHHH
Confidence 35555555555555555555442 244556677788888888876 6677777773
No 98
>1n11_A Ankyrin; clathrin, BAND 3, anion exchanger, structural protein; 2.70A {Homo sapiens} SCOP: d.211.1.1
Probab=97.75 E-value=4e-05 Score=82.04 Aligned_cols=51 Identities=27% Similarity=0.364 Sum_probs=24.7
Q ss_pred hHHHHHHHcCChhHHHHHHhhcccCCCCCCCccccCCCCCCCCCCchhhhhcccCChhHHHHHh
Q 002028 891 QLLNRAVKMKCRRMVDLLIHYSLTSSNDTPQKYIFPPNLAGPGGITPLHLAACTSDSDDIIDAL 954 (978)
Q Consensus 891 ~LLH~AV~~~s~~mVelLL~~~~~~~~~~~~~y~F~pd~~GpsGlTPLHIAAs~~g~~~vldaL 954 (978)
||||+|++.++.+||++||.+. -+|+..+..|.||||+|+.. |..+|++.|
T Consensus 346 t~L~~A~~~g~~~iv~~Ll~~g------------a~~~~~~~~g~t~l~~A~~~-g~~~~~~~l 396 (437)
T 1n11_A 346 SPLHQAAQQGHTDIVTLLLKNG------------ASPNEVSSDGTTPLAIAKRL-GYISVTDVL 396 (437)
T ss_dssp CHHHHHHHTTCHHHHHHHHHTT------------CCSCCCCSSSCCHHHHHHHT-TCHHHHHHH
T ss_pred CHHHHHHHCChHHHHHHHHHCc------------CCCCCCCCCCCCHHHHHHHc-CcHHHHHHH
Confidence 4444444444444444444332 23444455555555555554 444455544
No 99
>2fo1_E LIN-12 protein; beta-barrel, protein-DNA complex, double helix, ankyrin repeat, gene regulation/signalling protein/DNA complex; 3.12A {Caenorhabditis elegans} SCOP: d.211.1.1
Probab=97.74 E-value=5.3e-05 Score=80.80 Aligned_cols=87 Identities=15% Similarity=0.100 Sum_probs=68.8
Q ss_pred HHHHHHhccchHHHHHHHHHHHHhccccCCCccHHHHHHhhhchHHHHHHHcCChhHHHHHHhhcccCCCCCCCccccCC
Q 002028 848 FLLVFSVDRGCCALVKAILDILVEGNLSMDGLSRESLEMLWEIQLLNRAVKMKCRRMVDLLIHYSLTSSNDTPQKYIFPP 927 (978)
Q Consensus 848 ~LL~FAverdWcAVvkkLLdiL~~g~v~~~~~s~~~~~~l~e~~LLH~AV~~~s~~mVelLL~~~~~~~~~~~~~y~F~p 927 (978)
..|-+|+.++-..+++.||.. +..+...... .+.|+||+|++.++.+||++||.+. .++
T Consensus 281 t~Lh~A~~~g~~~~v~~Ll~~---~~~~~n~~d~------~g~TpL~~A~~~g~~~iv~~Ll~~g------------ad~ 339 (373)
T 2fo1_E 281 TALHYAAQVSNMPIVKYLVGE---KGSNKDKQDE------DGKTPIMLAAQEGRIEVVMYLIQQG------------ASV 339 (373)
T ss_dssp CTHHHHHSSCCHHHHHHHHHH---SCCCTTCCCT------TCCCHHHHHHHHTCHHHHHHHHHTT------------CCS
T ss_pred CHHHHHHHhCCHHHHHHHHHh---cCCCccCcCC------CCCCHHHHHHHcCCHHHHHHHHHcC------------CCc
Confidence 467888999999999888864 2233332221 4789999999999999999999874 356
Q ss_pred CCCCCCCCchhhhhcccCChhHHHHHhhc
Q 002028 928 NLAGPGGITPLHLAACTSDSDDIIDALTN 956 (978)
Q Consensus 928 d~~GpsGlTPLHIAAs~~g~~~vldaLt~ 956 (978)
++.+..|.||||+|+.. +..+|++.|..
T Consensus 340 ~~~d~~g~t~l~~A~~~-g~~~iv~~Ll~ 367 (373)
T 2fo1_E 340 EAVDATDHTARQLAQAN-NHHNIVDIFDR 367 (373)
T ss_dssp SCCCSSSCCHHHHHHHT-TCHHHHHHHHT
T ss_pred cCCCCCCCCHHHHHHHc-CCHHHHHHHHh
Confidence 77788999999999988 88999999943
No 100
>3jue_A Arfgap with coiled-coil, ANK repeat and PH domain containing protein 1; arfgap domain, zinc-binding module, GTPase activ metal-binding, nitration; 2.30A {Homo sapiens} PDB: 3t9k_A 4f1p_A
Probab=97.74 E-value=4.5e-05 Score=83.48 Aligned_cols=85 Identities=15% Similarity=0.123 Sum_probs=67.3
Q ss_pred HHHHHHhccchHHHHHHHHHHHHhccccCCCccHHHHHHhhhchHHHHHHHcCChhHHHHHHhhcccCCCCCCCccccCC
Q 002028 848 FLLVFSVDRGCCALVKAILDILVEGNLSMDGLSRESLEMLWEIQLLNRAVKMKCRRMVDLLIHYSLTSSNDTPQKYIFPP 927 (978)
Q Consensus 848 ~LL~FAverdWcAVvkkLLdiL~~g~v~~~~~s~~~~~~l~e~~LLH~AV~~~s~~mVelLL~~~~~~~~~~~~~y~F~p 927 (978)
..|-+|+..+-..+++.||.. +.+.+... ..+.|+||+|+..++.++|++||.+. -++
T Consensus 237 TpLh~Aa~~g~~~iv~~LL~~----Gadvn~~d------~~G~TpLh~A~~~g~~~~v~~LL~~G------------ad~ 294 (368)
T 3jue_A 237 TPLIQATAANSLLACEFLLQN----GANVNQAD------SAGRGPLHHATILGHTGLACLFLKRG------------ADL 294 (368)
T ss_dssp CHHHHHHHTTCHHHHHHHHHT----TCCTTCCC------TTSCCHHHHHHHHTCHHHHHHHHHTT------------CCT
T ss_pred CHHHHHHHCCCHHHHHHHHHc----CCCCCCCC------CCCCCHHHHHHHcCcHHHHHHHHHCc------------CCC
Confidence 467788888888888888864 23333222 14789999999999999999999874 346
Q ss_pred CCCCCCCCchhhhhcccCChhHHHHHhh
Q 002028 928 NLAGPGGITPLHLAACTSDSDDIIDALT 955 (978)
Q Consensus 928 d~~GpsGlTPLHIAAs~~g~~~vldaLt 955 (978)
++.+..|.||||+|+.. +..+|+++|.
T Consensus 295 ~~~d~~G~TpL~~A~~~-g~~~iv~lLl 321 (368)
T 3jue_A 295 GARDSEGRDPLTIAMET-ANADIVTLLR 321 (368)
T ss_dssp TCCCTTSCCHHHHHHHT-TCHHHHHHHH
T ss_pred CCcCCCCCCHHHHHHHC-CCHHHHHHHH
Confidence 77788999999999988 8888999983
No 101
>2xai_A ASB-9, ankyrin repeat and SOCS box protein 9; transcription regulation, autoantibody; 2.58A {Homo sapiens}
Probab=97.73 E-value=4.5e-05 Score=76.71 Aligned_cols=81 Identities=14% Similarity=0.166 Sum_probs=61.5
Q ss_pred HHHHHHhccchHHHHHHHHHHHHhccccCCCccHHHHHHhhhchHHHHHHHcCChhHHHHHHhhcccCCCCCCCccccCC
Q 002028 848 FLLVFSVDRGCCALVKAILDILVEGNLSMDGLSRESLEMLWEIQLLNRAVKMKCRRMVDLLIHYSLTSSNDTPQKYIFPP 927 (978)
Q Consensus 848 ~LL~FAverdWcAVvkkLLdiL~~g~v~~~~~s~~~~~~l~e~~LLH~AV~~~s~~mVelLL~~~~~~~~~~~~~y~F~p 927 (978)
..|-+|+.++...+++.||..- .+... . -.+.|+||+|++.++.++|++|+.+. -++
T Consensus 136 t~L~~A~~~~~~~~v~~Ll~~g----~~~~~-~------~~g~t~Lh~A~~~~~~~~v~~Ll~~g------------ad~ 192 (261)
T 2xai_A 136 TPLYLACENQQRACVKKLLESG----ADVNQ-G------KGQDSPLHAVARTASEELACLLMDFG------------ADT 192 (261)
T ss_dssp CHHHHHHHTTCHHHHHHHHHHT----CCTTC-C------BTTBCHHHHHHHHTCHHHHHHHHHTT------------CCT
T ss_pred CHHHHHHHhCCHHHHHHHHHcC----CCCCC-C------CCCCChHHHHHHcCCHHHHHHHHHcC------------CCC
Confidence 4577888888888888888742 22111 1 24679999999999999999999874 357
Q ss_pred CCCCCCCCchhhhhcccCChhHHHHHh
Q 002028 928 NLAGPGGITPLHLAACTSDSDDIIDAL 954 (978)
Q Consensus 928 d~~GpsGlTPLHIAAs~~g~~~vldaL 954 (978)
++.+..|.||||+|+.- .+++..|
T Consensus 193 ~~~d~~g~tpl~~A~~~---~~~~~~l 216 (261)
T 2xai_A 193 QAKNAEGKRPVELVPPE---SPLAQLF 216 (261)
T ss_dssp TCCCTTSCCGGGGSCTT---CTHHHHH
T ss_pred CCcCCCCCChhhhcccc---ccHHHHH
Confidence 78899999999999943 4577777
No 102
>1sw6_A Regulatory protein SWI6; transcription regulation, ankyrin repeats, cell-cycle; 2.10A {Saccharomyces cerevisiae} SCOP: d.211.1.1
Probab=97.73 E-value=5e-05 Score=79.72 Aligned_cols=45 Identities=27% Similarity=0.375 Sum_probs=39.1
Q ss_pred hhchHHHHHHHcCChhHHHHHHhhcccCCCCCCCccccCCCCCCCCCCchhhhhccc
Q 002028 888 WEIQLLNRAVKMKCRRMVDLLIHYSLTSSNDTPQKYIFPPNLAGPGGITPLHLAACT 944 (978)
Q Consensus 888 ~e~~LLH~AV~~~s~~mVelLL~~~~~~~~~~~~~y~F~pd~~GpsGlTPLHIAAs~ 944 (978)
.+.||||+||+.++.+||++||.+. -++++.+..|+||||+||..
T Consensus 282 ~G~TpLh~A~~~g~~~~v~~Ll~~G------------ad~~~~d~~G~TpL~~A~~~ 326 (327)
T 1sw6_A 282 NGDTCLNIAARLGNISIVDALLDYG------------ADPFIANKSGLRPVDFGAGL 326 (327)
T ss_dssp TSCCHHHHHHHHCCHHHHHHHHHTT------------CCTTCCCTTSCCGGGGTCC-
T ss_pred CCCCHHHHHHHcCCHHHHHHHHHcC------------CCCcccCCCCCCHHHHHHhc
Confidence 3679999999999999999999874 34778899999999999864
No 103
>2fo1_E LIN-12 protein; beta-barrel, protein-DNA complex, double helix, ankyrin repeat, gene regulation/signalling protein/DNA complex; 3.12A {Caenorhabditis elegans} SCOP: d.211.1.1
Probab=97.72 E-value=2.4e-05 Score=83.45 Aligned_cols=59 Identities=15% Similarity=0.156 Sum_probs=37.1
Q ss_pred HHHHHHhccchHHHHHHHHH----HHHhccccCCCccHHHHHHhhhchHHHHHHHcCChhHHHHHHhhc
Q 002028 848 FLLVFSVDRGCCALVKAILD----ILVEGNLSMDGLSRESLEMLWEIQLLNRAVKMKCRRMVDLLIHYS 912 (978)
Q Consensus 848 ~LL~FAverdWcAVvkkLLd----iL~~g~v~~~~~s~~~~~~l~e~~LLH~AV~~~s~~mVelLL~~~ 912 (978)
-.|-+|+.++-..+++.||. .|.+.+.+.+.... .+.|+||+||..++.+||++||.+.
T Consensus 127 t~Lh~Aa~~g~~~~v~~Ll~~~~~~ll~~ga~vn~~d~------~g~TpL~~A~~~g~~~iv~~Ll~~g 189 (373)
T 2fo1_E 127 TVLHWIASNSSAEKSEDLIVHEAKECIAAGADVNAMDC------DENTPLMLAVLARRRRLVAYLMKAG 189 (373)
T ss_dssp CHHHHHHCTTCCSCCTTHHHHHHHHHHHTCCCTTCCCT------TSCCHHHHHHHHTCHHHHHHHHHTT
T ss_pred CHHHHHHHCCCHHHHHHHHHHHHHHHHhcCCCCcCCCC------CCCCHHHHHHHcChHHHHHHHHHCC
Confidence 45666777766666666653 33344444333321 3678888888888888888888764
No 104
>3jue_A Arfgap with coiled-coil, ANK repeat and PH domain containing protein 1; arfgap domain, zinc-binding module, GTPase activ metal-binding, nitration; 2.30A {Homo sapiens} PDB: 3t9k_A 4f1p_A
Probab=97.72 E-value=5.1e-05 Score=83.04 Aligned_cols=87 Identities=15% Similarity=0.077 Sum_probs=67.5
Q ss_pred HHHHHHhcc-chHHHHHHHHHHHHhccccCCCccHHHHHHhhhchHHHHHHHcCChhHHHHHHhhcccCCCCCCCccccC
Q 002028 848 FLLVFSVDR-GCCALVKAILDILVEGNLSMDGLSRESLEMLWEIQLLNRAVKMKCRRMVDLLIHYSLTSSNDTPQKYIFP 926 (978)
Q Consensus 848 ~LL~FAver-dWcAVvkkLLdiL~~g~v~~~~~s~~~~~~l~e~~LLH~AV~~~s~~mVelLL~~~~~~~~~~~~~y~F~ 926 (978)
.+|-.|+.. +-..+++.||.- +.+.+.... -..+.|+||+||..++.++|++||.+. .+
T Consensus 201 t~L~~Aa~~~g~~~~v~~LL~~----Gadvn~~~~----~~~g~TpLh~Aa~~g~~~iv~~LL~~G------------ad 260 (368)
T 3jue_A 201 ALLFRASGHPPSLPTMADALAH----GADVNWVNG----GQDNATPLIQATAANSLLACEFLLQNG------------AN 260 (368)
T ss_dssp HHHHHHTSSSCCHHHHHHHHHT----TCCTTCCCT----TTTCCCHHHHHHHTTCHHHHHHHHHTT------------CC
T ss_pred cHHHHHHHccCCHHHHHHHHHc----CCCCCcccc----ccCCCCHHHHHHHCCCHHHHHHHHHcC------------CC
Confidence 378888988 888899888753 223222210 023679999999999999999999874 35
Q ss_pred CCCCCCCCCchhhhhcccCChhHHHHHhh
Q 002028 927 PNLAGPGGITPLHLAACTSDSDDIIDALT 955 (978)
Q Consensus 927 pd~~GpsGlTPLHIAAs~~g~~~vldaLt 955 (978)
++..+..|.||||+|+.. +..+++.+|.
T Consensus 261 vn~~d~~G~TpLh~A~~~-g~~~~v~~LL 288 (368)
T 3jue_A 261 VNQADSAGRGPLHHATIL-GHTGLACLFL 288 (368)
T ss_dssp TTCCCTTSCCHHHHHHHH-TCHHHHHHHH
T ss_pred CCCCCCCCCCHHHHHHHc-CcHHHHHHHH
Confidence 677789999999999988 7888999983
No 105
>3deo_A Signal recognition particle 43 kDa protein; chloroplast SRP system, signal sequence, ankyrin repeat, chromodomain, type I turn; 1.50A {Arabidopsis thaliana} SCOP: b.34.13.2 k.37.1.1 PDB: 3dep_A 1x32_A
Probab=97.71 E-value=4.3e-05 Score=73.04 Aligned_cols=76 Identities=20% Similarity=0.215 Sum_probs=57.6
Q ss_pred HHHHHHhccchHHHHHHHHHHHHhccccCCCccHHHHHHhhhchHHHHHHHcCChhHHHHHHhhcccCCCCCCCccccCC
Q 002028 848 FLLVFSVDRGCCALVKAILDILVEGNLSMDGLSRESLEMLWEIQLLNRAVKMKCRRMVDLLIHYSLTSSNDTPQKYIFPP 927 (978)
Q Consensus 848 ~LL~FAverdWcAVvkkLLdiL~~g~v~~~~~s~~~~~~l~e~~LLH~AV~~~s~~mVelLL~~~~~~~~~~~~~y~F~p 927 (978)
..|-+|+.++-..+++.||.. +.+..... --.+.||||+|+..++.++|++|+.+. .++
T Consensus 78 t~L~~A~~~~~~~~v~~Ll~~----ga~~~~~~-----~~~g~tpL~~A~~~~~~~~v~~Ll~~g------------a~~ 136 (183)
T 3deo_A 78 TALLFVAGLGSDKCVRLLAEA----GADLDHRD-----MRGGLTALHMAAGYVRPEVVEALVELG------------ADI 136 (183)
T ss_dssp CHHHHHHHHTCHHHHHHHHHT----TCCTTCCC-----SSSSCCHHHHHHHTTCHHHHHHHHHHT------------CCT
T ss_pred CHHHHHHHcCCHHHHHHHHHc----CCCCCcCC-----CCCCCCHHHHHHhcCcHHHHHHHHHcC------------CCC
Confidence 356778888888888888863 22322221 014789999999999999999999874 346
Q ss_pred CCCCCCCCchhhhhccc
Q 002028 928 NLAGPGGITPLHLAACT 944 (978)
Q Consensus 928 d~~GpsGlTPLHIAAs~ 944 (978)
+..+..|.||||+|+..
T Consensus 137 ~~~d~~g~tpl~~A~~~ 153 (183)
T 3deo_A 137 EVEDERGLTALELAREI 153 (183)
T ss_dssp TCCCTTSCCHHHHHHHH
T ss_pred cCCCCCCCCHHHHHHHh
Confidence 77789999999999865
No 106
>3d9h_A CDNA FLJ77766, highly similar to HOMO sapiens ankyrin repeat and SOCS box-containing...; ASB9, ANK repeat, L-shaped, structural protein; 2.20A {Homo sapiens}
Probab=97.70 E-value=5e-05 Score=77.92 Aligned_cols=83 Identities=14% Similarity=0.204 Sum_probs=61.0
Q ss_pred HHHHHHhccchHHHHHHHHHHHHhccccCCCccHHHHHHhhhchHHHHHHHcCChhHHHHHHhhcccCCCCCCCccccCC
Q 002028 848 FLLVFSVDRGCCALVKAILDILVEGNLSMDGLSRESLEMLWEIQLLNRAVKMKCRRMVDLLIHYSLTSSNDTPQKYIFPP 927 (978)
Q Consensus 848 ~LL~FAverdWcAVvkkLLdiL~~g~v~~~~~s~~~~~~l~e~~LLH~AV~~~s~~mVelLL~~~~~~~~~~~~~y~F~p 927 (978)
..|.+|+..+...+++.||.. +.+... . -.+.|+||+|++.++.+||++|+.+. .++
T Consensus 192 t~L~~A~~~~~~~~v~~Ll~~----ga~~~~-~------~~g~t~L~~A~~~~~~~~v~~Ll~~g------------ad~ 248 (285)
T 3d9h_A 192 TPLYLACENQQRACVKKLLES----GADVNQ-G------KGQDSPLHAVVRTASEELACLLMDFG------------ADT 248 (285)
T ss_dssp CHHHHHHHTTCHHHHHHHHHT----TCCTTC-C------BTTBCHHHHHHHTTCHHHHHHHHHTT------------CCT
T ss_pred CHHHHHHHcCcHHHHHHHHHC----CCCCCC-C------CCCCCHHHHHHHcCCHHHHHHHHHCC------------CCC
Confidence 456778888888888887764 222221 1 23679999999999999999999774 357
Q ss_pred CCCCCCCCchhhhhcccCChhHHHHHhhc
Q 002028 928 NLAGPGGITPLHLAACTSDSDDIIDALTN 956 (978)
Q Consensus 928 d~~GpsGlTPLHIAAs~~g~~~vldaLt~ 956 (978)
++.+..|.||||+|+ ...+++.+|..
T Consensus 249 ~~~d~~g~t~l~~A~---~~~~~~~~Ll~ 274 (285)
T 3d9h_A 249 QAKNAEGKRPVELVP---PESPLAQLFLE 274 (285)
T ss_dssp TCCCTTSCCGGGGSC---TTSHHHHHHHH
T ss_pred CCcCCCCCCHHHHhc---CccHHHHHHHH
Confidence 778899999999999 34578888743
No 107
>3eu9_A Huntingtin-interacting protein 14; epigenetics, ankyrin repeats, methyllyine binding, huntingti interacting protein 14, acyltransferase, ANK repeat; HET: HIS; 1.99A {Homo sapiens}
Probab=97.68 E-value=7.2e-05 Score=71.96 Aligned_cols=54 Identities=24% Similarity=0.174 Sum_probs=30.2
Q ss_pred HHHHHhccchHHHHHHHHHHHHhccccCCCccHHHHHHhhhchHHHHHHHcCChhHHHHHHhh
Q 002028 849 LLVFSVDRGCCALVKAILDILVEGNLSMDGLSRESLEMLWEIQLLNRAVKMKCRRMVDLLIHY 911 (978)
Q Consensus 849 LL~FAverdWcAVvkkLLdiL~~g~v~~~~~s~~~~~~l~e~~LLH~AV~~~s~~mVelLL~~ 911 (978)
.|.+|+..+-..+++.||..-.. ...... -.+.++||+|++.++.+||++|+.+
T Consensus 45 ~L~~A~~~~~~~~v~~Ll~~~~~----~~~~~~-----~~~~t~L~~A~~~~~~~~v~~Ll~~ 98 (240)
T 3eu9_A 45 LLHWAAINNRIDLVKYYISKGAI----VDQLGG-----DLNSTPLHWATRQGHLSMVVQLMKY 98 (240)
T ss_dssp HHHHHHHTTCHHHHHHHHHTTCC----TTCCBT-----TTTBCHHHHHHHHTCHHHHHHHHHT
T ss_pred HHHHHHHhCCHHHHHHHHHcCCc----chhhcC-----CcCCChhHHHHHcCCHHHHHHHHHc
Confidence 56677777777777777653211 111100 1145666666666666666666655
No 108
>3lvq_E ARF-GAP with SH3 domain, ANK repeat and PH domain containing protein 3, ADP-ribosylation...; GDP, ASAP3, UPLC1, linkers, alternat splicing; HET: GDP; 3.38A {Homo sapiens} PDB: 3lvr_E*
Probab=97.67 E-value=5e-05 Score=84.84 Aligned_cols=90 Identities=20% Similarity=0.064 Sum_probs=65.6
Q ss_pred HHHHHhccchHHHHHHHHHHHHhccccCCCccHHHHHHhhhchHHHHHHH---cCChhHHHHHHhhcccCCCCCCCcccc
Q 002028 849 LLVFSVDRGCCALVKAILDILVEGNLSMDGLSRESLEMLWEIQLLNRAVK---MKCRRMVDLLIHYSLTSSNDTPQKYIF 925 (978)
Q Consensus 849 LL~FAverdWcAVvkkLLdiL~~g~v~~~~~s~~~~~~l~e~~LLH~AV~---~~s~~mVelLL~~~~~~~~~~~~~y~F 925 (978)
.|-.|+..+-..+++.||.--. +..........-..+.|+||+||+ .++.+||++||.+. -
T Consensus 135 ~L~~A~~~g~~~~v~~ll~~g~----~~n~~~~~~~~~~~g~t~Lh~A~~~a~~g~~~~v~~Ll~~g------------a 198 (497)
T 3lvq_E 135 RLWTAICNRDLLSVLEAFANGQ----DFGQPLPGPDAQAPEELVLHLAVKVANQASLPLVDFIIQNG------------G 198 (497)
T ss_dssp HHHHHHHHTCHHHHHHHHHTTC----CSSSCBCCSSSCCSCBCHHHHHHHTCCTTTHHHHHHHHHHS------------C
T ss_pred HHHHHHhccCHHHHHHHHhhcc----cccCCCCCcccccccchHHHHHHHhcccccHHHHHHHHHcC------------C
Confidence 4677788888888888876432 221110000000147899999988 99999999999874 3
Q ss_pred CCCCCCCCCCchhhhhcccCChhHHHHHhh
Q 002028 926 PPNLAGPGGITPLHLAACTSDSDDIIDALT 955 (978)
Q Consensus 926 ~pd~~GpsGlTPLHIAAs~~g~~~vldaLt 955 (978)
+++..+..|+||||+||.. |..+++.+|.
T Consensus 199 ~vn~~d~~g~TpLh~A~~~-g~~~~v~~Ll 227 (497)
T 3lvq_E 199 HLDAKAADGNTALHYAALY-NQPDCLKLLL 227 (497)
T ss_dssp CTTCCCSSSCCHHHHHTTT-TCHHHHHHHH
T ss_pred CCCccCCCCCcHHHHHHHc-CCHHHHHHHH
Confidence 5777788999999999998 8889999993
No 109
>1dcq_A PYK2-associated protein beta; zinc-binding module, ankyrin repeats, metal binding protein; 2.10A {Mus musculus} SCOP: d.211.1.1 g.45.1.1
Probab=97.65 E-value=4e-05 Score=79.63 Aligned_cols=54 Identities=26% Similarity=0.299 Sum_probs=47.7
Q ss_pred hchHHHHHHHc---CChhHHHHHHhhcccCCCCCCCccccCCCCCCCCCCchhhhhcccCChhHHHHHhh
Q 002028 889 EIQLLNRAVKM---KCRRMVDLLIHYSLTSSNDTPQKYIFPPNLAGPGGITPLHLAACTSDSDDIIDALT 955 (978)
Q Consensus 889 e~~LLH~AV~~---~s~~mVelLL~~~~~~~~~~~~~y~F~pd~~GpsGlTPLHIAAs~~g~~~vldaLt 955 (978)
+.|+||+||+. ++.+||++||.+. -+++..+..|+||||+||.. |..+++.+|.
T Consensus 169 g~t~Lh~A~~~~~~~~~~~v~~Ll~~g------------a~in~~d~~g~TpLh~A~~~-g~~~~v~~Ll 225 (278)
T 1dcq_A 169 DETALHLAVRSVDRTSLHIVDFLVQNS------------GNLDKQTGKGSTALHYCCLT-DNAECLKLLL 225 (278)
T ss_dssp TCBHHHHHHHHCCTTTHHHHHHHHHHC------------SCTTCCCTTCCCHHHHHHHT-TCHHHHHHHH
T ss_pred CCCcchHHHHhcccchHHHHHHHHHCC------------CCccccCCCCCCHHHHHHHc-CCHHHHHHHH
Confidence 68999999999 9999999999885 34667788999999999987 8889999993
No 110
>2b0o_E UPLC1; arfgap, structural genomics, structural genomics consortium, SGC, metal binding protein; 2.06A {Homo sapiens}
Probab=97.64 E-value=8.2e-05 Score=78.24 Aligned_cols=89 Identities=20% Similarity=0.112 Sum_probs=61.1
Q ss_pred HHHHhccchHHHHHHHHHHHHhccccCCCccHHHHHHhhhchHHHHHHHc---CChhHHHHHHhhcccCCCCCCCccccC
Q 002028 850 LVFSVDRGCCALVKAILDILVEGNLSMDGLSRESLEMLWEIQLLNRAVKM---KCRRMVDLLIHYSLTSSNDTPQKYIFP 926 (978)
Q Consensus 850 L~FAverdWcAVvkkLLdiL~~g~v~~~~~s~~~~~~l~e~~LLH~AV~~---~s~~mVelLL~~~~~~~~~~~~~y~F~ 926 (978)
|-.|+..+=..+++.||. .+.+........-.-..+.|+||+||+. ++.+||++||.+. -+
T Consensus 155 L~~A~~~g~~~~v~~ll~----~g~d~~~~~~~~~~~~~g~t~Lh~A~~~~~~~~~~iv~~Ll~~g------------ad 218 (301)
T 2b0o_E 155 LWTAICNRDLLSVLEAFA----NGQDFGQPLPGPDAQAPEELVLHLAVKVANQASLPLVDFIIQNG------------GH 218 (301)
T ss_dssp HHHHHHTTCHHHHHHHHH----TTCCTTSCEECSSSCSCEECHHHHHHHTCCTTTHHHHHHHHHHS------------SC
T ss_pred HhhhhhccCHHHHHHHHh----cCCcccccCCCcccCCCCccHHHHHHHhcccCcHHHHHHHHhcC------------CC
Confidence 455666666666666652 2333222100000001367999999997 8999999999885 24
Q ss_pred CCCCCCCCCchhhhhcccCChhHHHHHhh
Q 002028 927 PNLAGPGGITPLHLAACTSDSDDIIDALT 955 (978)
Q Consensus 927 pd~~GpsGlTPLHIAAs~~g~~~vldaLt 955 (978)
++..+..|.||||+||.. +..+++.+|.
T Consensus 219 vn~~d~~G~TpLh~A~~~-g~~~~v~~Ll 246 (301)
T 2b0o_E 219 LDAKAADGNTALHYAALY-NQPDCLKLLL 246 (301)
T ss_dssp TTCCCTTCCCHHHHHHHT-TCHHHHHHHH
T ss_pred CCCCCCCCCCHHHHHHHc-CCHHHHHHHH
Confidence 666788999999999987 8889999993
No 111
>1n11_A Ankyrin; clathrin, BAND 3, anion exchanger, structural protein; 2.70A {Homo sapiens} SCOP: d.211.1.1
Probab=97.62 E-value=8.1e-05 Score=79.70 Aligned_cols=84 Identities=21% Similarity=0.273 Sum_probs=66.6
Q ss_pred HHHHHHhccchHHHHHHHHHHHHhccccCCCccHHHHHHhhhchHHHHHHHcCChhHHHHHHhhcccCCCCCCCccccCC
Q 002028 848 FLLVFSVDRGCCALVKAILDILVEGNLSMDGLSRESLEMLWEIQLLNRAVKMKCRRMVDLLIHYSLTSSNDTPQKYIFPP 927 (978)
Q Consensus 848 ~LL~FAverdWcAVvkkLLdiL~~g~v~~~~~s~~~~~~l~e~~LLH~AV~~~s~~mVelLL~~~~~~~~~~~~~y~F~p 927 (978)
..|.+|+..+...+++.||.- +.+.+.... .+.|+||+|++.++.++|++|+... .++
T Consensus 280 t~L~~A~~~~~~~~~~~Ll~~----g~~~~~~~~------~g~t~L~~A~~~g~~~~v~~Ll~~g------------ad~ 337 (437)
T 1n11_A 280 TPLHLVAQEGHVPVADVLIKH----GVMVDATTR------MGYTPLHVASHYGNIKLVKFLLQHQ------------ADV 337 (437)
T ss_dssp CHHHHHHHHTCHHHHHHHHHH----TCCTTCCCS------SCCCHHHHHHHSSCSHHHHHHHHTT------------CCT
T ss_pred CHHHHHHHcCCHHHHHHHHhC----CccCCCCCC------CCCCHHHHHHHcCcHHHHHHHHhcC------------CCC
Confidence 357788888988888888864 222222221 3789999999999999999999874 346
Q ss_pred CCCCCCCCchhhhhcccCChhHHHHHh
Q 002028 928 NLAGPGGITPLHLAACTSDSDDIIDAL 954 (978)
Q Consensus 928 d~~GpsGlTPLHIAAs~~g~~~vldaL 954 (978)
+..+..|.||||+|+.. +..+|+..|
T Consensus 338 n~~~~~g~t~L~~A~~~-g~~~iv~~L 363 (437)
T 1n11_A 338 NAKTKLGYSPLHQAAQQ-GHTDIVTLL 363 (437)
T ss_dssp TCCCTTSCCHHHHHHHT-TCHHHHHHH
T ss_pred CCCCCCCCCHHHHHHHC-ChHHHHHHH
Confidence 77788999999999987 888999998
No 112
>3kea_A K1L; tropism, ANK repeat, viral protein; 2.30A {Vaccinia virus}
Probab=97.60 E-value=8.7e-05 Score=76.28 Aligned_cols=55 Identities=20% Similarity=0.083 Sum_probs=34.0
Q ss_pred HHHHHHhccchHHHHHHHHHHHHhccccCCCccHHHHHHhhhchHHHHHHHcCChhHHHHHHhhc
Q 002028 848 FLLVFSVDRGCCALVKAILDILVEGNLSMDGLSRESLEMLWEIQLLNRAVKMKCRRMVDLLIHYS 912 (978)
Q Consensus 848 ~LL~FAverdWcAVvkkLLdiL~~g~v~~~~~s~~~~~~l~e~~LLH~AV~~~s~~mVelLL~~~ 912 (978)
..|-+|+..+-..+++.||.. +.+..... -.+.||||+|++.++.++|++|+.+.
T Consensus 64 t~L~~A~~~g~~~~v~~Ll~~----ga~~~~~d------~~g~t~L~~A~~~g~~~~v~~Ll~~g 118 (285)
T 3kea_A 64 FPLHQAATLEDTKIVKILLFS----GLDDSQFD------DKGNTALYYAVDSGNMQTVKLFVKKN 118 (285)
T ss_dssp CHHHHHTTSSSCHHHHHHHHT----TCCTTCCC------TTSCCHHHHHHHTTCHHHHHHHHHHC
T ss_pred CHHHHHHHcCCHHHHHHHHHC----CCCCCCcC------CCCCcHHHHHHHcCCHHHHHHHHhcC
Confidence 456778888888888877763 22222111 13557777777777777777777653
No 113
>3t8k_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center F or structural genomics, MCSG; 1.77A {Leptotrichia buccalis}
Probab=97.57 E-value=0.00011 Score=72.20 Aligned_cols=60 Identities=7% Similarity=0.005 Sum_probs=39.8
Q ss_pred HHHHHHHhccchHHHHHHHHHHHHhccccCCCccHHHHHHhhhchHHHHHHHcCC------hhHHHHHHhhc
Q 002028 847 KFLLVFSVDRGCCALVKAILDILVEGNLSMDGLSRESLEMLWEIQLLNRAVKMKC------RRMVDLLIHYS 912 (978)
Q Consensus 847 k~LL~FAverdWcAVvkkLLdiL~~g~v~~~~~s~~~~~~l~e~~LLH~AV~~~s------~~mVelLL~~~ 912 (978)
+-.|-+|+..+-...-..+..+|.+.+.+...... .+.||||+|+..++ .+||++||...
T Consensus 39 ~T~Lh~A~~~~~~~~~~~iv~~Ll~~Gadvn~~d~------~g~TpLh~a~~~~~~~~~~~~~iv~~Ll~~G 104 (186)
T 3t8k_A 39 SNILYDVLRNNNDEARYKISMFLINKGADIKSRTK------EGTTLFFPLFQGGGNDITGTTELCKIFLEKG 104 (186)
T ss_dssp TTHHHHHTTCSCHHHHHHHHHHHHHTTCCSSCCCT------TCCCTHHHHHHHCTTCHHHHHHHHHHHHHTT
T ss_pred CCHHHHHHHcCCcchHHHHHHHHHHCCCCCCCCCC------CCCcHHHHHHHcCCcchhhHHHHHHHHHHCC
Confidence 35778888887554222334444454555444332 47899999999987 57899999875
No 114
>1sw6_A Regulatory protein SWI6; transcription regulation, ankyrin repeats, cell-cycle; 2.10A {Saccharomyces cerevisiae} SCOP: d.211.1.1
Probab=97.56 E-value=8.8e-05 Score=77.88 Aligned_cols=63 Identities=13% Similarity=0.054 Sum_probs=45.8
Q ss_pred HHHHHHHhccccCCC-ccHHHHHHhhhchHHHHHHHcCChhHHHHHHhhcccCCCCCCCccccCCCCCCCCCCchhhhhc
Q 002028 864 AILDILVEGNLSMDG-LSRESLEMLWEIQLLNRAVKMKCRRMVDLLIHYSLTSSNDTPQKYIFPPNLAGPGGITPLHLAA 942 (978)
Q Consensus 864 kLLdiL~~g~v~~~~-~s~~~~~~l~e~~LLH~AV~~~s~~mVelLL~~~~~~~~~~~~~y~F~pd~~GpsGlTPLHIAA 942 (978)
.++..|.+.+.+.+. ... .+.||||+||+.++.+||++||... -+++..+..|+||||+||
T Consensus 111 ~~~~~l~~~g~dvn~~~d~------~g~TpLh~Aa~~g~~~~v~~Ll~~G------------ad~n~~d~~g~TpLh~A~ 172 (327)
T 1sw6_A 111 EVNDAFPNTQLNLNIPVDE------HGNTPLHWLTSIANLELVKHLVKHG------------SNRLYGDNMGESCLVKAV 172 (327)
T ss_dssp HHHHHCTTSCCCSCSCCST------TCCCHHHHHHHTTCHHHHHHHHHTT------------CCTTBCCTTCCCHHHHHH
T ss_pred HHHHHHHhcCCCcccccCC------CCCcHHHHHHHcCCHHHHHHHHHcC------------CCCCCcCCCCCCHHHHHH
Confidence 444455555555444 222 4789999999999999999999874 345666778888888888
Q ss_pred cc
Q 002028 943 CT 944 (978)
Q Consensus 943 s~ 944 (978)
..
T Consensus 173 ~~ 174 (327)
T 1sw6_A 173 KS 174 (327)
T ss_dssp HS
T ss_pred Hh
Confidence 75
No 115
>3t8k_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center F or structural genomics, MCSG; 1.77A {Leptotrichia buccalis}
Probab=97.25 E-value=0.00018 Score=70.53 Aligned_cols=73 Identities=10% Similarity=0.126 Sum_probs=54.0
Q ss_pred HHHHHHhccccCCCccHHHHHHhhhc-hHHHHHHHcC-----ChhHHHHHHh-hcccCCCCCCCccccCCCCCCCCCCch
Q 002028 865 ILDILVEGNLSMDGLSRESLEMLWEI-QLLNRAVKMK-----CRRMVDLLIH-YSLTSSNDTPQKYIFPPNLAGPGGITP 937 (978)
Q Consensus 865 LLdiL~~g~v~~~~~s~~~~~~l~e~-~LLH~AV~~~-----s~~mVelLL~-~~~~~~~~~~~~y~F~pd~~GpsGlTP 937 (978)
++.+|.+.+.+...... .+. +|||+|+..+ ..+||++||. .. -++++.+..|.||
T Consensus 96 iv~~Ll~~Gadin~~d~------~g~ttpLh~A~~~~~~~~~~~~iv~~Ll~~~g------------ad~~~~d~~G~Tp 157 (186)
T 3t8k_A 96 LCKIFLEKGADITALYK------PYKIVVFKNIFNYFVDENEMIPLYKLIFSQSG------------LQLLIKDKWGLTA 157 (186)
T ss_dssp HHHHHHHTTCCSSSCBG------GGTBCTTGGGGGCCSCHHHHHHHHHHHHTSTT------------CCTTCCCTTSCCH
T ss_pred HHHHHHHCCCCCCccCC------CcCchHHHHHHHcCCChhhHHHHHHHHHHhcC------------CCCcccCCCCCCH
Confidence 34445555555554432 366 9999999944 4569999997 53 4577889999999
Q ss_pred hhhhcccCChhHHHHHhhc
Q 002028 938 LHLAACTSDSDDIIDALTN 956 (978)
Q Consensus 938 LHIAAs~~g~~~vldaLt~ 956 (978)
||+|+.. +..+++..|.+
T Consensus 158 L~~A~~~-~~~~~v~~L~~ 175 (186)
T 3t8k_A 158 LEFVKRC-QKPIALKMMED 175 (186)
T ss_dssp HHHHHTT-TCHHHHHHHHH
T ss_pred HHHHHHc-CCHHHHHHHHH
Confidence 9999987 77788888854
No 116
>2aja_A Ankyrin repeat family protein; NESG, Q5ZSV0, structural genomics, PSI, protein structure initiative; 2.80A {Legionella pneumophila} SCOP: a.118.24.1
Probab=97.15 E-value=0.00013 Score=79.93 Aligned_cols=92 Identities=9% Similarity=0.104 Sum_probs=64.0
Q ss_pred HHHHHHHhccchHHHHHHHHHHHHhccccCCCccHHHHHHhhhchHHHHHHHcCChhHHHHHHhhcccCCCCCCCccccC
Q 002028 847 KFLLVFSVDRGCCALVKAILDILVEGNLSMDGLSRESLEMLWEIQLLNRAVKMKCRRMVDLLIHYSLTSSNDTPQKYIFP 926 (978)
Q Consensus 847 k~LL~FAverdWcAVvkkLLdiL~~g~v~~~~~s~~~~~~l~e~~LLH~AV~~~s~~mVelLL~~~~~~~~~~~~~y~F~ 926 (978)
+.-|-+|+.+|-..+++.||.- |. + .....+..- ..|+||+|++.|+.++|++|+.+.+ +
T Consensus 129 ~tpL~~Aa~~G~~eiv~~Ll~~---ga---d-~~~~~i~~~-~~TpLh~Aa~~G~~eiv~~Ll~~ga------------~ 188 (376)
T 2aja_A 129 YQAFRLAAENGHLHVLNRLCEL---AP---T-EIMAMIQAE-NYHAFRLAAENGHLHVLNRLCELAP------------T 188 (376)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHS---CT---T-THHHHHSHH-HHHHHHHHHHTTCHHHHHHHHHSCG------------G
T ss_pred CCHHHHHHHcCCHHHHHHHHhC---CC---C-ccccccCCC-CCCHHHHHHHCCCHHHHHHHHHcCC------------c
Confidence 3478889999999999888753 10 0 000001111 2799999999999999999998753 1
Q ss_pred CCC--CCCCCCchhhhhcccCChhHHHHHhhcCc
Q 002028 927 PNL--AGPGGITPLHLAACTSDSDDIIDALTNDP 958 (978)
Q Consensus 927 pd~--~GpsGlTPLHIAAs~~g~~~vldaLt~DP 958 (978)
++. .+..|+||||+||+..|..+|+..|...+
T Consensus 189 ~~~~~~d~~g~TpL~~Aa~~~G~~eiv~~Ll~~g 222 (376)
T 2aja_A 189 EATAMIQAENYYAFRWAAVGRGHHNVINFLLDCP 222 (376)
T ss_dssp GHHHHHHHHHHHHHHHHHSTTCCHHHHHHHTTSH
T ss_pred cchhccCCCCCCHHHHHHHHCCCHHHHHHHHhCC
Confidence 111 35568999999994459999999997653
No 117
>2aja_A Ankyrin repeat family protein; NESG, Q5ZSV0, structural genomics, PSI, protein structure initiative; 2.80A {Legionella pneumophila} SCOP: a.118.24.1
Probab=96.35 E-value=0.00097 Score=73.10 Aligned_cols=91 Identities=12% Similarity=0.185 Sum_probs=61.1
Q ss_pred HHHHHHHhccchHHHHHHHHHHHHhccccCCCccHHHHHHhhhchHHHHHHHcCChhHHHHHHhhcccCCCCCCCccccC
Q 002028 847 KFLLVFSVDRGCCALVKAILDILVEGNLSMDGLSRESLEMLWEIQLLNRAVKMKCRRMVDLLIHYSLTSSNDTPQKYIFP 926 (978)
Q Consensus 847 k~LL~FAverdWcAVvkkLLdiL~~g~v~~~~~s~~~~~~l~e~~LLH~AV~~~s~~mVelLL~~~~~~~~~~~~~y~F~ 926 (978)
+-.|-+|+..|-..+++.||.--..... .+.. .. .+.+|||+|++.|+.++|++|+...+.. ..
T Consensus 93 ~T~Lh~Aa~~G~~e~v~~Ll~~ga~~~~-~~~~-----~~-~~~tpL~~Aa~~G~~eiv~~Ll~~gad~---------~~ 156 (376)
T 2aja_A 93 EVICFVAAITGCSSALDTLCLLLTSDEI-VKVI-----QA-ENYQAFRLAAENGHLHVLNRLCELAPTE---------IM 156 (376)
T ss_dssp HHHHHHHHHHCCHHHHHHHTTC--CCSS-CC-------CH-HHHHHHHHHHHTTCHHHHHHHHHSCTTT---------HH
T ss_pred CCHHHHHHHcCCHHHHHHHHHcCCcHHH-HHHh-----cc-CCCCHHHHHHHcCCHHHHHHHHhCCCCc---------cc
Confidence 3678889999999999988764321000 0111 11 2558999999999999999999875200 00
Q ss_pred CCCCCCCCCchhhhhcccCChhHHHHHhh
Q 002028 927 PNLAGPGGITPLHLAACTSDSDDIIDALT 955 (978)
Q Consensus 927 pd~~GpsGlTPLHIAAs~~g~~~vldaLt 955 (978)
+++.... +||||+||.. |..+|++.|.
T Consensus 157 ~~i~~~~-~TpLh~Aa~~-G~~eiv~~Ll 183 (376)
T 2aja_A 157 AMIQAEN-YHAFRLAAEN-GHLHVLNRLC 183 (376)
T ss_dssp HHHSHHH-HHHHHHHHHT-TCHHHHHHHH
T ss_pred cccCCCC-CCHHHHHHHC-CCHHHHHHHH
Confidence 1121222 9999999988 8899999993
No 118
>2cxk_A Camta1, calmodulin binding transcription activator 1; structural genomics, TIG/IPT domain, NPPSFA; 1.85A {Homo sapiens} SCOP: b.1.18.1
Probab=57.83 E-value=29 Score=31.62 Aligned_cols=68 Identities=12% Similarity=0.071 Sum_probs=49.4
Q ss_pred CeeeEecceEEecCCeeEEEEEeecCCCCCceEEEeecCcccceeeccccCCCCcccceeEEeeeecCCCCCCccceEEE
Q 002028 680 PELISVSPLAVVGGQELSFKLRGRNLTNLGTKIHCTFMGGYASQEVTSSTCQGSIYDEIILAGLKIQDTSPSVLGRFFIE 759 (978)
Q Consensus 680 P~I~~V~PiAv~ag~~~~f~v~G~NL~~p~tRLLcs~~GkYL~~E~~~~~~~g~~~de~~~~~f~v~~s~P~~~Gr~FIE 759 (978)
=.|..++|-+-..+.-+.+.|.|.+|.. +.++.|.|.+.-..+|.... + .+.|. +.|...|++=|.
T Consensus 7 ~~Itd~sP~~gp~sGGTkv~I~G~~L~~-gs~~~~~fG~~~vpa~~~s~---~----vl~C~------tPp~~~G~v~~~ 72 (95)
T 2cxk_A 7 GMVTDYSPEWSYPEGGVKVLITGPWQEA-SNNYSCLFDQISVPASLIQP---G----VLRCY------CPAHDTGLVTLQ 72 (95)
T ss_dssp SCCCEEECSEECTTCCCEEEEESSCCCC-SSCEEEEETTEEEECEEEET---T----EEEEE------CCCCCSEEEEEE
T ss_pred EEEEEECCCcccCCCCEEEEEEeECCCC-CccEEEEECCEEEeEEEeEC---C----EEEEE------ecCCCCceEeEE
Confidence 3799999999999999999999999965 45899999886555665321 1 22222 445567777666
Q ss_pred Ee
Q 002028 760 VE 761 (978)
Q Consensus 760 VE 761 (978)
|.
T Consensus 73 v~ 74 (95)
T 2cxk_A 73 VA 74 (95)
T ss_dssp EE
T ss_pred EE
Confidence 66
No 119
>1uad_C RSEC5, exocyst complex component SEC5; small GTP-binding protein, immunogloblin-like fold, beta- sandwich, endocytosis/exocytosis complex; HET: GNP; 2.10A {Rattus norvegicus} SCOP: b.1.18.18 PDB: 1hk6_A
Probab=35.17 E-value=34 Score=31.13 Aligned_cols=41 Identities=24% Similarity=0.285 Sum_probs=33.8
Q ss_pred CCCCeeeEecceEEecCCeeEEEEEeecCCCCCceE-EEeecCc
Q 002028 677 WSSPELISVSPLAVVGGQELSFKLRGRNLTNLGTKI-HCTFMGG 719 (978)
Q Consensus 677 ~~sP~I~~V~PiAv~ag~~~~f~v~G~NL~~p~tRL-Lcs~~Gk 719 (978)
...|+|..++|..-.-| +.+.++|.||......+ .+.+.|.
T Consensus 5 ~p~P~It~i~P~~Gp~G--T~vTI~G~nlg~~~sdv~~V~vgg~ 46 (99)
T 1uad_C 5 RQPPLVTGISPNEGIPW--TKVTIRGENLGTGPTDLIGLTICGH 46 (99)
T ss_dssp CCCCEEEEEESSEESTT--CEEEEEEECSCSSGGGEEEEEETTE
T ss_pred CCCCEEEEEECCCcCCC--CEEEEEEEeCCCCcccceEEEECCE
Confidence 34689999999988665 99999999998876665 5888884
Done!