Query 002029
Match_columns 978
No_of_seqs 344 out of 2966
Neff 8.7
Searched_HMMs 46136
Date Thu Mar 28 14:54:29 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/002029.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/002029hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG0206 P-type ATPase [General 100.0 3E-168 7E-173 1501.3 53.4 901 4-937 192-1093(1151)
2 PLN03190 aminophospholipid tra 100.0 4E-151 9E-156 1407.5 90.7 898 7-940 248-1161(1178)
3 TIGR01652 ATPase-Plipid phosph 100.0 9E-142 2E-146 1342.0 92.4 891 5-931 163-1057(1057)
4 KOG0210 P-type ATPase [Inorgan 100.0 1E-127 3E-132 1049.0 54.6 806 5-930 240-1050(1051)
5 COG0474 MgtA Cation transport 100.0 6.7E-99 1E-103 930.2 55.2 668 40-906 215-900 (917)
6 KOG0202 Ca2+ transporting ATPa 100.0 4.3E-98 9E-103 841.2 43.9 733 40-922 190-970 (972)
7 KOG0204 Calcium transporting A 100.0 1.2E-94 2.7E-99 811.7 39.8 717 16-917 250-1005(1034)
8 TIGR01523 ATPase-IID_K-Na pota 100.0 1.4E-91 3E-96 872.7 67.9 748 42-922 196-1049(1053)
9 TIGR01116 ATPase-IIA1_Ca sarco 100.0 2.3E-91 5E-96 869.1 65.8 726 42-919 149-917 (917)
10 TIGR01106 ATPase-IIC_X-K sodiu 100.0 5.6E-89 1.2E-93 853.0 63.2 717 42-921 214-986 (997)
11 TIGR01517 ATPase-IIB_Ca plasma 100.0 2.5E-87 5.4E-92 836.4 64.0 697 26-917 205-938 (941)
12 TIGR01522 ATPase-IIA2_Ca golgi 100.0 1.7E-83 3.6E-88 797.3 65.1 663 43-921 195-883 (884)
13 PRK15122 magnesium-transportin 100.0 9.3E-82 2E-86 776.7 56.4 637 42-917 240-894 (903)
14 TIGR01657 P-ATPase-V P-type AT 100.0 2.4E-80 5.2E-85 780.4 63.9 680 42-869 311-1024(1054)
15 PRK10517 magnesium-transportin 100.0 6.6E-80 1.4E-84 758.9 56.1 639 42-920 241-898 (902)
16 TIGR01524 ATPase-IIIB_Mg magne 100.0 3.5E-79 7.5E-84 753.6 58.6 641 33-916 183-858 (867)
17 TIGR01647 ATPase-IIIA_H plasma 100.0 2E-74 4.4E-79 702.8 54.5 585 25-851 130-730 (755)
18 KOG0203 Na+/K+ ATPase, alpha s 100.0 3E-76 6.6E-81 662.6 25.9 723 38-923 232-1010(1019)
19 KOG0208 Cation transport ATPas 100.0 1.5E-68 3.3E-73 609.6 42.4 645 42-814 332-1011(1140)
20 PRK14010 potassium-transportin 100.0 4.5E-61 9.7E-66 565.3 41.0 479 27-775 145-652 (673)
21 PRK01122 potassium-transportin 100.0 3.3E-59 7.2E-64 550.0 44.1 483 27-776 145-657 (679)
22 TIGR01497 kdpB K+-transporting 100.0 2.5E-56 5.5E-61 524.2 41.7 433 27-724 146-593 (675)
23 KOG0209 P-type ATPase [Inorgan 100.0 3.7E-53 8.1E-58 472.7 38.8 601 41-808 334-1031(1160)
24 TIGR01494 ATPase_P-type ATPase 100.0 4.9E-52 1.1E-56 489.5 41.2 392 33-722 85-484 (499)
25 KOG0205 Plasma membrane H+-tra 100.0 1.1E-53 2.5E-58 466.3 24.1 462 34-716 187-661 (942)
26 COG2217 ZntA Cation transport 100.0 2.2E-50 4.8E-55 474.6 35.2 432 13-722 234-682 (713)
27 PRK11033 zntA zinc/cadmium/mer 100.0 2.5E-47 5.4E-52 463.5 40.8 413 27-720 283-709 (741)
28 KOG0207 Cation transport ATPas 100.0 4.2E-47 9.1E-52 435.2 29.3 438 26-721 418-867 (951)
29 TIGR01525 ATPase-IB_hvy heavy 100.0 2.8E-46 6.1E-51 444.4 35.5 421 27-721 96-529 (556)
30 TIGR01512 ATPase-IB2_Cd heavy 100.0 2.7E-44 5.8E-49 424.6 35.7 401 27-721 95-508 (536)
31 TIGR01511 ATPase-IB1_Cu copper 100.0 4.2E-44 9.1E-49 424.2 36.8 404 27-720 132-547 (562)
32 PRK10671 copA copper exporting 100.0 5.4E-43 1.2E-47 434.7 40.9 418 27-720 363-793 (834)
33 COG2216 KdpB High-affinity K+ 100.0 5.6E-37 1.2E-41 329.2 31.4 422 26-710 144-580 (681)
34 PF00702 Hydrolase: haloacid d 99.9 5.1E-22 1.1E-26 208.7 12.0 97 477-659 115-215 (215)
35 PF13246 Hydrolase_like2: Puta 99.5 5.1E-15 1.1E-19 131.2 6.1 90 302-409 1-90 (91)
36 COG4087 Soluble P-type ATPase 99.5 5.5E-14 1.2E-18 125.8 10.3 126 478-690 19-146 (152)
37 PF00122 E1-E2_ATPase: E1-E2 A 99.3 3.9E-12 8.3E-17 135.2 10.0 140 28-205 76-230 (230)
38 PF00689 Cation_ATPase_C: Cati 99.3 1.4E-11 3E-16 125.8 12.4 173 732-917 2-182 (182)
39 PRK10513 sugar phosphate phosp 98.9 3.7E-09 8.1E-14 115.2 8.1 198 477-682 11-254 (270)
40 COG0561 Cof Predicted hydrolas 98.8 5.6E-08 1.2E-12 105.6 13.9 189 487-682 17-247 (264)
41 PRK15126 thiamin pyrimidine py 98.8 9.3E-09 2E-13 112.2 6.9 199 477-682 10-248 (272)
42 COG0560 SerB Phosphoserine pho 98.8 7.9E-08 1.7E-12 99.6 12.9 112 488-669 76-190 (212)
43 TIGR02137 HSK-PSP phosphoserin 98.7 6.5E-08 1.4E-12 99.8 9.9 126 489-689 68-194 (203)
44 PRK10976 putative hydrolase; P 98.7 2.8E-08 6E-13 108.1 6.4 190 489-682 19-250 (266)
45 PRK11133 serB phosphoserine ph 98.7 6.9E-08 1.5E-12 106.4 9.5 129 489-691 181-313 (322)
46 PRK01158 phosphoglycolate phos 98.7 9.3E-08 2E-12 101.5 10.2 182 490-682 21-215 (230)
47 PF08282 Hydrolase_3: haloacid 98.6 2.5E-08 5.4E-13 107.2 3.5 194 488-683 14-245 (254)
48 TIGR01482 SPP-subfamily Sucros 98.6 2.3E-07 5E-12 98.1 10.1 178 489-682 15-207 (225)
49 PLN02887 hydrolase family prot 98.5 7.8E-08 1.7E-12 113.4 6.2 62 620-682 499-565 (580)
50 TIGR01487 SPP-like sucrose-pho 98.5 3.9E-07 8.5E-12 95.6 10.7 178 489-682 18-205 (215)
51 PRK03669 mannosyl-3-phosphogly 98.5 6E-07 1.3E-11 97.8 12.1 188 490-682 25-254 (271)
52 PRK10530 pyridoxal phosphate ( 98.5 4.5E-07 9.8E-12 98.9 10.7 188 489-682 20-257 (272)
53 TIGR01486 HAD-SF-IIB-MPGP mann 98.5 1.4E-06 3.1E-11 94.0 12.7 188 490-682 17-242 (256)
54 TIGR00099 Cof-subfamily Cof su 98.4 4.5E-07 9.8E-12 98.0 6.8 190 489-682 16-246 (256)
55 TIGR00338 serB phosphoserine p 98.4 9.3E-07 2E-11 93.1 8.9 123 489-684 85-211 (219)
56 KOG1615 Phosphoserine phosphat 98.3 1.6E-06 3.4E-11 84.2 7.8 129 489-685 88-220 (227)
57 KOG4383 Uncharacterized conser 98.3 2.3E-05 5.1E-10 88.5 17.4 280 472-765 809-1146(1354)
58 TIGR02461 osmo_MPG_phos mannos 98.3 3.5E-06 7.6E-11 88.7 9.5 52 487-538 13-68 (225)
59 TIGR01670 YrbI-phosphatas 3-de 98.2 4.9E-06 1.1E-10 82.1 9.8 96 497-682 36-134 (154)
60 PRK13582 thrH phosphoserine ph 98.2 8.6E-06 1.9E-10 84.7 11.3 126 489-689 68-194 (205)
61 PRK00192 mannosyl-3-phosphogly 98.2 1.2E-05 2.5E-10 87.8 12.2 50 477-529 12-61 (273)
62 TIGR01491 HAD-SF-IB-PSPlk HAD- 98.2 7.7E-06 1.7E-10 84.7 9.6 118 489-677 80-200 (201)
63 PF12710 HAD: haloacid dehalog 98.1 7.5E-06 1.6E-10 84.1 9.1 39 492-530 92-130 (192)
64 TIGR02726 phenyl_P_delta pheny 98.1 7.6E-06 1.6E-10 81.5 8.1 98 496-682 41-140 (169)
65 TIGR02471 sucr_syn_bact_C sucr 98.1 9E-06 1.9E-10 86.7 9.0 56 621-677 152-212 (236)
66 PRK09484 3-deoxy-D-manno-octul 98.1 9.6E-06 2.1E-10 82.5 8.4 111 496-696 55-175 (183)
67 TIGR02463 MPGP_rel mannosyl-3- 98.1 2.2E-05 4.7E-10 82.8 11.3 36 493-528 20-55 (221)
68 TIGR01485 SPP_plant-cyano sucr 98.0 2.2E-05 4.9E-10 84.3 10.9 176 487-668 19-213 (249)
69 PRK14502 bifunctional mannosyl 98.0 4.4E-05 9.6E-10 90.0 13.2 49 490-538 434-486 (694)
70 PRK08238 hypothetical protein; 98.0 0.00096 2.1E-08 77.8 24.0 40 489-528 72-111 (479)
71 PRK10187 trehalose-6-phosphate 98.0 0.00012 2.5E-09 79.3 15.1 183 489-686 36-236 (266)
72 PRK12702 mannosyl-3-phosphogly 98.0 6.1E-05 1.3E-09 80.1 11.7 52 488-539 17-72 (302)
73 TIGR01484 HAD-SF-IIB HAD-super 97.9 5.1E-05 1.1E-09 78.9 10.8 172 489-664 17-204 (204)
74 TIGR03333 salvage_mtnX 2-hydro 97.9 5.1E-05 1.1E-09 79.5 10.3 138 488-690 69-208 (214)
75 PLN02954 phosphoserine phospha 97.9 4.8E-05 1E-09 80.3 10.1 41 489-529 84-124 (224)
76 TIGR01488 HAD-SF-IB Haloacid D 97.8 5E-05 1.1E-09 76.9 8.7 40 490-529 74-113 (177)
77 PTZ00174 phosphomannomutase; P 97.8 4E-05 8.6E-10 82.2 7.6 49 620-669 180-235 (247)
78 TIGR01490 HAD-SF-IB-hyp1 HAD-s 97.8 6.3E-05 1.4E-09 78.0 8.8 112 487-667 85-199 (202)
79 PLN02382 probable sucrose-phos 97.7 0.00013 2.8E-09 83.8 10.7 174 494-674 33-229 (413)
80 TIGR01489 DKMTPPase-SF 2,3-dik 97.7 0.00016 3.4E-09 74.0 9.5 42 488-529 71-112 (188)
81 COG1778 Low specificity phosph 97.7 0.00013 2.7E-09 69.0 7.5 112 496-698 42-162 (170)
82 PRK14501 putative bifunctional 97.7 0.00068 1.5E-08 84.3 16.3 187 490-689 515-719 (726)
83 PRK09552 mtnX 2-hydroxy-3-keto 97.7 0.00023 5E-09 74.9 10.4 38 489-526 74-111 (219)
84 cd01427 HAD_like Haloacid deha 97.6 0.00013 2.9E-09 69.7 7.2 44 486-529 21-64 (139)
85 PRK13222 phosphoglycolate phos 97.4 0.0006 1.3E-08 72.0 10.1 42 488-529 92-133 (226)
86 TIGR01454 AHBA_synth_RP 3-amin 97.4 0.00068 1.5E-08 70.5 8.9 41 489-529 75-115 (205)
87 COG0546 Gph Predicted phosphat 97.2 0.0015 3.3E-08 68.7 9.5 126 487-689 87-216 (220)
88 TIGR01449 PGP_bact 2-phosphogl 97.2 0.0012 2.6E-08 69.0 8.5 41 489-529 85-125 (213)
89 TIGR01545 YfhB_g-proteo haloac 97.1 0.0031 6.7E-08 65.6 10.3 110 489-668 94-204 (210)
90 PRK13223 phosphoglycolate phos 97.1 0.0022 4.7E-08 69.8 9.2 41 488-528 100-140 (272)
91 PLN02423 phosphomannomutase 97.0 0.0031 6.8E-08 67.3 9.5 49 619-669 180-235 (245)
92 PRK13226 phosphoglycolate phos 97.0 0.0038 8.3E-08 66.1 9.9 40 489-528 95-134 (229)
93 TIGR01544 HAD-SF-IE haloacid d 96.9 0.0047 1E-07 66.1 9.6 45 489-533 121-165 (277)
94 PRK13288 pyrophosphatase PpaX; 96.8 0.0038 8.3E-08 65.3 8.7 41 489-529 82-122 (214)
95 PLN02580 trehalose-phosphatase 96.8 0.025 5.5E-07 63.5 15.3 237 442-690 91-373 (384)
96 PRK13225 phosphoglycolate phos 96.8 0.0061 1.3E-07 66.1 9.9 41 489-529 142-182 (273)
97 PLN03243 haloacid dehalogenase 96.8 0.0056 1.2E-07 66.0 9.5 42 489-530 109-150 (260)
98 PF05116 S6PP: Sucrose-6F-phos 96.7 0.0057 1.2E-07 65.4 9.2 162 501-669 31-211 (247)
99 PRK11590 hypothetical protein; 96.7 0.0068 1.5E-07 63.3 9.5 111 489-669 95-206 (211)
100 TIGR00685 T6PP trehalose-phosp 96.7 0.02 4.3E-07 61.3 13.3 66 621-689 162-238 (244)
101 PRK10826 2-deoxyglucose-6-phos 96.6 0.0063 1.4E-07 64.1 8.4 42 488-529 91-132 (222)
102 PLN02205 alpha,alpha-trehalose 96.5 0.078 1.7E-06 66.4 18.0 203 476-689 603-840 (854)
103 PRK11587 putative phosphatase; 96.4 0.012 2.6E-07 61.8 8.9 40 489-528 83-122 (218)
104 COG4030 Uncharacterized protei 96.3 0.015 3.2E-07 58.3 8.0 159 489-682 83-251 (315)
105 TIGR01422 phosphonatase phosph 96.2 0.02 4.3E-07 61.7 9.4 41 489-529 99-139 (253)
106 PLN02575 haloacid dehalogenase 96.1 0.023 4.9E-07 63.9 9.7 41 489-529 216-256 (381)
107 TIGR03351 PhnX-like phosphonat 96.1 0.02 4.3E-07 60.1 8.9 42 488-529 86-127 (220)
108 PRK13478 phosphonoacetaldehyde 96.1 0.037 8E-07 60.1 11.1 40 489-528 101-140 (267)
109 TIGR01672 AphA HAD superfamily 96.1 0.011 2.5E-07 62.2 6.6 41 489-529 114-158 (237)
110 PLN03017 trehalose-phosphatase 96.0 0.41 8.9E-06 53.4 18.2 207 477-689 119-354 (366)
111 TIGR01548 HAD-SF-IA-hyp1 haloa 95.9 0.025 5.3E-07 58.3 8.3 43 487-529 104-146 (197)
112 COG3769 Predicted hydrolase (H 95.9 0.16 3.6E-06 51.1 13.2 48 493-540 27-79 (274)
113 PRK06769 hypothetical protein; 95.9 0.047 1E-06 54.9 9.7 41 476-516 11-55 (173)
114 smart00775 LNS2 LNS2 domain. T 95.8 0.051 1.1E-06 53.7 9.5 34 487-520 25-58 (157)
115 PRK06698 bifunctional 5'-methy 95.7 0.06 1.3E-06 63.4 10.9 41 489-529 330-370 (459)
116 TIGR01662 HAD-SF-IIIA HAD-supe 95.6 0.054 1.2E-06 51.8 8.6 41 488-528 24-72 (132)
117 TIGR02253 CTE7 HAD superfamily 95.6 0.051 1.1E-06 57.0 9.2 40 489-528 94-133 (221)
118 PLN02779 haloacid dehalogenase 95.4 0.05 1.1E-06 59.6 8.7 38 489-526 144-181 (286)
119 PRK11009 aphA acid phosphatase 95.4 0.036 7.7E-07 58.5 7.1 41 488-528 113-157 (237)
120 PRK08942 D,D-heptose 1,7-bisph 95.3 0.077 1.7E-06 53.8 8.9 53 638-690 119-176 (181)
121 COG4359 Uncharacterized conser 95.3 0.071 1.5E-06 52.1 7.8 108 489-663 73-183 (220)
122 PRK09449 dUMP phosphatase; Pro 95.2 0.1 2.2E-06 54.9 9.9 39 489-528 95-133 (224)
123 TIGR01428 HAD_type_II 2-haloal 95.0 0.077 1.7E-06 54.7 8.2 40 489-528 92-131 (198)
124 PLN02770 haloacid dehalogenase 95.0 0.074 1.6E-06 57.0 8.2 41 489-529 108-148 (248)
125 PHA02530 pseT polynucleotide k 95.0 0.047 1E-06 60.4 6.9 44 486-529 184-227 (300)
126 PLN02940 riboflavin kinase 94.9 0.069 1.5E-06 61.0 8.0 40 489-528 93-133 (382)
127 PF13419 HAD_2: Haloacid dehal 94.7 0.065 1.4E-06 53.4 6.3 43 487-529 75-117 (176)
128 TIGR01990 bPGM beta-phosphoglu 94.6 0.072 1.6E-06 54.1 6.7 39 488-528 86-124 (185)
129 TIGR01685 MDP-1 magnesium-depe 94.6 0.15 3.3E-06 51.0 8.7 50 479-528 35-85 (174)
130 PLN02151 trehalose-phosphatase 94.5 0.77 1.7E-05 51.1 14.6 237 443-689 71-340 (354)
131 PRK14988 GMP/IMP nucleotidase; 94.5 0.15 3.2E-06 53.7 8.7 41 489-529 93-133 (224)
132 TIGR02009 PGMB-YQAB-SF beta-ph 94.5 0.088 1.9E-06 53.4 6.8 39 488-528 87-125 (185)
133 PLN02811 hydrolase 94.5 0.12 2.6E-06 54.3 7.9 32 488-519 77-108 (220)
134 TIGR01509 HAD-SF-IA-v3 haloaci 94.4 0.14 3.1E-06 51.7 8.2 40 489-529 85-124 (183)
135 TIGR02254 YjjG/YfnB HAD superf 94.2 0.18 4E-06 52.8 8.7 40 489-529 97-136 (224)
136 TIGR01549 HAD-SF-IA-v1 haloaci 93.5 0.23 5E-06 48.7 7.4 40 487-526 62-101 (154)
137 TIGR01668 YqeG_hyp_ppase HAD s 93.4 0.28 6.2E-06 49.1 7.9 41 488-528 42-83 (170)
138 PF06888 Put_Phosphatase: Puta 92.7 0.46 1E-05 49.9 8.6 41 489-529 71-113 (234)
139 smart00577 CPDc catalytic doma 92.7 0.13 2.7E-06 50.4 4.2 42 486-528 42-83 (148)
140 TIGR02252 DREG-2 REG-2-like, H 92.6 0.38 8.2E-06 49.7 7.9 39 489-528 105-143 (203)
141 TIGR01681 HAD-SF-IIIC HAD-supe 92.4 0.4 8.7E-06 45.5 7.1 39 489-527 29-68 (128)
142 TIGR01533 lipo_e_P4 5'-nucleot 92.3 0.65 1.4E-05 49.9 9.2 42 487-528 116-160 (266)
143 TIGR01261 hisB_Nterm histidino 92.3 0.38 8.1E-06 47.7 6.9 26 489-514 29-54 (161)
144 TIGR01656 Histidinol-ppas hist 92.0 0.32 7E-06 47.4 6.1 27 489-515 27-53 (147)
145 TIGR00213 GmhB_yaeD D,D-heptos 91.9 0.67 1.4E-05 46.7 8.4 48 639-686 123-174 (176)
146 PF02358 Trehalose_PPase: Treh 91.2 0.88 1.9E-05 48.3 8.9 188 489-682 19-233 (235)
147 PRK05446 imidazole glycerol-ph 90.9 0.61 1.3E-05 52.3 7.5 26 488-513 29-54 (354)
148 PF08235 LNS2: LNS2 (Lipin/Ned 90.6 1.1 2.4E-05 43.7 8.1 114 487-662 25-142 (157)
149 TIGR02247 HAD-1A3-hyp Epoxide 90.5 0.5 1.1E-05 49.1 6.1 29 489-517 94-122 (211)
150 TIGR01691 enolase-ppase 2,3-di 89.4 1.2 2.6E-05 46.7 7.7 39 487-525 93-131 (220)
151 PRK10563 6-phosphogluconate ph 89.0 0.77 1.7E-05 48.1 6.2 39 488-529 87-125 (221)
152 TIGR01664 DNA-3'-Pase DNA 3'-p 87.9 2.6 5.6E-05 42.0 8.7 27 490-516 43-69 (166)
153 TIGR01686 FkbH FkbH-like domai 87.7 1.2 2.6E-05 49.7 6.9 37 489-525 31-67 (320)
154 KOG3120 Predicted haloacid deh 87.6 3.3 7.2E-05 42.2 9.0 40 489-528 84-124 (256)
155 PLN02919 haloacid dehalogenase 87.2 2 4.4E-05 55.7 9.4 41 489-529 161-201 (1057)
156 TIGR01459 HAD-SF-IIA-hyp4 HAD- 87.0 2.6 5.6E-05 44.9 8.8 47 482-528 17-65 (242)
157 TIGR01675 plant-AP plant acid 86.2 2.9 6.2E-05 43.8 8.2 31 488-518 119-149 (229)
158 PF13344 Hydrolase_6: Haloacid 84.8 0.89 1.9E-05 41.1 3.3 47 482-528 7-56 (101)
159 PHA02597 30.2 hypothetical pro 84.8 3.4 7.4E-05 42.3 8.1 39 489-528 74-112 (197)
160 COG1877 OtsB Trehalose-6-phosp 83.3 35 0.00076 36.7 14.9 168 485-659 36-218 (266)
161 COG0241 HisB Histidinol phosph 82.7 4.8 0.0001 40.4 7.7 47 615-661 88-144 (181)
162 PRK09456 ?-D-glucose-1-phospha 82.4 2.7 5.8E-05 43.2 6.1 30 489-518 84-113 (199)
163 PLN02177 glycerol-3-phosphate 81.9 13 0.00028 43.9 12.1 77 623-708 173-249 (497)
164 COG2179 Predicted hydrolase of 81.7 4 8.7E-05 39.9 6.4 39 490-528 47-85 (175)
165 PF09419 PGP_phosphatase: Mito 78.6 7.7 0.00017 38.6 7.4 44 485-528 55-107 (168)
166 KOG3040 Predicted sugar phosph 76.9 13 0.00028 37.6 8.3 49 478-526 12-60 (262)
167 PRK10444 UMP phosphatase; Prov 75.1 3.3 7.2E-05 44.3 4.2 45 482-526 10-54 (248)
168 TIGR01684 viral_ppase viral ph 74.7 4.2 9.2E-05 43.9 4.8 41 490-530 146-187 (301)
169 TIGR01458 HAD-SF-IIA-hyp3 HAD- 74.4 5 0.00011 43.1 5.4 47 482-528 10-63 (257)
170 PLN02645 phosphoglycolate phos 73.3 5.5 0.00012 44.2 5.5 47 482-528 37-86 (311)
171 TIGR01993 Pyr-5-nucltdase pyri 72.5 8.9 0.00019 38.7 6.5 38 489-529 84-121 (184)
172 PRK10725 fructose-1-P/6-phosph 71.5 9.7 0.00021 38.4 6.5 37 491-529 90-126 (188)
173 PHA03398 viral phosphatase sup 70.6 6.1 0.00013 42.8 4.8 40 490-529 148-188 (303)
174 TIGR01457 HAD-SF-IIA-hyp2 HAD- 69.7 9.1 0.0002 40.9 6.0 48 482-529 10-60 (249)
175 PF06570 DUF1129: Protein of u 67.1 1.2E+02 0.0026 31.3 13.6 25 853-877 149-173 (206)
176 PF03767 Acid_phosphat_B: HAD 66.6 12 0.00027 39.3 6.2 30 488-517 114-143 (229)
177 COG0637 Predicted phosphatase/ 66.4 20 0.00043 37.6 7.7 43 488-530 85-127 (221)
178 TIGR02251 HIF-SF_euk Dullard-l 62.5 6.3 0.00014 39.1 2.9 43 485-528 38-80 (162)
179 TIGR01663 PNK-3'Pase polynucle 61.2 24 0.00053 41.9 7.8 27 490-516 198-224 (526)
180 TIGR01689 EcbF-BcbF capsule bi 58.6 8.6 0.00019 36.3 2.8 33 488-520 23-55 (126)
181 TIGR01458 HAD-SF-IIA-hyp3 HAD- 57.4 20 0.00043 38.6 5.8 53 638-690 195-254 (257)
182 PLN03063 alpha,alpha-trehalose 53.3 4E+02 0.0087 33.8 17.1 45 490-534 533-580 (797)
183 TIGR01680 Veg_Stor_Prot vegeta 51.9 60 0.0013 34.9 8.1 31 487-517 143-173 (275)
184 PTZ00445 p36-lilke protein; Pr 51.2 22 0.00048 36.5 4.6 29 490-518 76-104 (219)
185 PRK10748 flavin mononucleotide 49.7 36 0.00077 36.0 6.2 28 489-517 113-140 (238)
186 TIGR01452 PGP_euk phosphoglyco 49.6 20 0.00044 39.0 4.4 48 482-529 11-61 (279)
187 COG0647 NagD Predicted sugar p 47.7 24 0.00053 38.0 4.5 46 481-526 16-61 (269)
188 TIGR02468 sucrsPsyn_pln sucros 46.3 2.3E+02 0.0051 36.6 13.3 64 602-666 925-1002(1050)
189 cd02071 MM_CoA_mut_B12_BD meth 45.6 64 0.0014 30.1 6.6 80 424-528 22-103 (122)
190 cd02067 B12-binding B12 bindin 43.6 79 0.0017 29.2 6.9 80 424-528 22-103 (119)
191 TIGR01522 ATPase-IIA2_Ca golgi 43.1 2.1E+02 0.0045 36.9 12.7 36 71-106 38-74 (884)
192 COG4858 Uncharacterized membra 42.7 1.3E+02 0.0029 30.0 8.1 34 847-880 158-191 (226)
193 TIGR01517 ATPase-IIB_Ca plasma 42.5 3.4E+02 0.0075 35.2 14.6 38 71-108 74-111 (941)
194 TIGR01493 HAD-SF-IA-v2 Haloaci 41.2 39 0.00085 33.5 4.8 33 489-528 90-122 (175)
195 COG1011 Predicted hydrolase (H 41.2 1.1E+02 0.0023 31.8 8.3 40 489-529 99-138 (229)
196 COG3700 AphA Acid phosphatase 39.9 86 0.0019 31.1 6.4 39 490-528 115-157 (237)
197 TIGR01501 MthylAspMutase methy 39.6 81 0.0018 30.1 6.2 80 424-528 24-111 (134)
198 PF13380 CoA_binding_2: CoA bi 39.6 43 0.00093 31.1 4.3 39 490-528 64-103 (116)
199 PF05297 Herpes_LMP1: Herpesvi 39.2 10 0.00022 40.0 0.0 14 892-905 167-180 (381)
200 PF05822 UMPH-1: Pyrimidine 5' 36.9 1.6E+02 0.0035 31.3 8.4 50 488-537 89-138 (246)
201 PF13253 DUF4044: Protein of u 35.8 1.3E+02 0.0027 21.5 4.9 20 77-96 2-21 (35)
202 TIGR02250 FCP1_euk FCP1-like p 35.0 58 0.0012 32.0 4.6 44 485-529 54-97 (156)
203 smart00831 Cation_ATPase_N Cat 34.3 1.1E+02 0.0024 24.5 5.6 39 70-108 23-61 (64)
204 KOG4050 Glutamate transporter 34.0 2.3E+02 0.0049 27.6 8.0 43 676-718 23-65 (188)
205 TIGR02230 ATPase_gene1 F0F1-AT 34.0 1.6E+02 0.0035 26.5 6.7 62 850-919 37-98 (100)
206 PF02261 Asp_decarbox: Asparta 33.5 50 0.0011 30.3 3.5 83 318-449 20-102 (116)
207 TIGR01662 HAD-SF-IIIA HAD-supe 33.3 3.4E+02 0.0073 25.2 9.6 96 416-529 28-126 (132)
208 TIGR00223 panD L-aspartate-alp 32.9 66 0.0014 29.9 4.2 84 316-448 18-101 (126)
209 PRK05449 aspartate alpha-decar 32.7 70 0.0015 29.9 4.3 84 316-448 18-101 (126)
210 PF12710 HAD: haloacid dehalog 32.7 23 0.0005 35.6 1.5 31 626-656 157-192 (192)
211 PLN03064 alpha,alpha-trehalose 32.6 8.7E+02 0.019 31.4 15.3 43 492-534 625-670 (934)
212 PF12689 Acid_PPase: Acid Phos 30.9 78 0.0017 31.6 4.8 41 489-529 45-86 (169)
213 COG0474 MgtA Cation transport 30.6 6.9E+02 0.015 32.3 14.4 42 890-932 850-891 (917)
214 PRK10444 UMP phosphatase; Prov 30.1 2.7E+02 0.0059 29.6 9.2 47 638-684 190-243 (248)
215 PF13242 Hydrolase_like: HAD-h 30.0 44 0.00096 28.0 2.5 47 638-684 20-73 (75)
216 cd06919 Asp_decarbox Aspartate 29.9 84 0.0018 28.6 4.3 84 316-448 17-100 (111)
217 PLN03140 ABC transporter G fam 29.8 1.6E+03 0.035 30.8 19.0 18 210-227 178-195 (1470)
218 KOG3109 Haloacid dehalogenase- 29.4 3.4E+02 0.0074 28.2 8.9 128 482-684 92-221 (244)
219 TIGR01460 HAD-SF-IIA Haloacid 28.8 86 0.0019 33.1 5.1 47 482-528 7-57 (236)
220 TIGR00640 acid_CoA_mut_C methy 27.4 1.9E+02 0.0041 27.5 6.5 80 424-528 25-106 (132)
221 cd02070 corrinoid_protein_B12- 27.1 1.2E+02 0.0027 31.0 5.7 79 424-528 105-185 (201)
222 TIGR02370 pyl_corrinoid methyl 25.7 1.4E+02 0.0031 30.5 5.8 78 424-528 107-187 (197)
223 PRK08508 biotin synthase; Prov 25.5 4.8E+02 0.01 28.3 10.3 39 494-532 101-155 (279)
224 PRK03557 zinc transporter ZitB 24.8 9.6E+02 0.021 26.4 19.1 55 702-758 18-72 (312)
225 TIGR00676 fadh2 5,10-methylene 24.8 2.6E+02 0.0055 30.3 7.9 42 476-517 57-99 (272)
226 PRK02261 methylaspartate mutas 24.2 2.1E+02 0.0045 27.4 6.3 80 424-528 26-113 (137)
227 KOG2189 Vacuolar H+-ATPase V0 23.8 1.2E+03 0.026 29.0 13.4 28 781-808 530-557 (829)
228 PF04341 DUF485: Protein of un 23.8 2.5E+02 0.0054 24.8 6.2 68 857-930 22-90 (91)
229 COG5012 Predicted cobalamin bi 23.6 1E+02 0.0022 31.9 4.2 79 425-528 128-207 (227)
230 cd05013 SIS_RpiR RpiR-like pro 22.4 6.1E+02 0.013 23.3 9.4 28 492-519 74-101 (139)
231 PRK10053 hypothetical protein; 22.3 50 0.0011 31.3 1.5 31 191-221 59-89 (130)
232 TIGR01454 AHBA_synth_RP 3-amin 22.2 5.9E+02 0.013 25.7 9.8 39 490-529 130-170 (205)
233 TIGR01459 HAD-SF-IIA-hyp4 HAD- 21.9 92 0.002 33.0 3.8 28 491-519 140-167 (242)
234 PF06123 CreD: Inner membrane 21.7 1.3E+03 0.028 26.8 14.9 59 696-758 289-347 (430)
235 PF06570 DUF1129: Protein of u 21.5 5.6E+02 0.012 26.3 9.3 8 914-921 194-201 (206)
236 PF00690 Cation_ATPase_N: Cati 21.0 1.3E+02 0.0028 24.8 3.6 36 70-105 33-68 (69)
237 cd02072 Glm_B12_BD B12 binding 20.8 2.3E+02 0.005 26.8 5.6 80 424-528 22-109 (128)
238 TIGR02244 HAD-IG-Ncltidse HAD 20.7 1.3E+02 0.0028 33.8 4.6 37 491-527 186-223 (343)
239 PF04551 GcpE: GcpE protein; 20.6 1.2E+03 0.027 26.1 13.2 115 403-536 147-269 (359)
No 1
>KOG0206 consensus P-type ATPase [General function prediction only]
Probab=100.00 E-value=3.4e-168 Score=1501.34 Aligned_cols=901 Identities=60% Similarity=0.995 Sum_probs=814.9
Q ss_pred ccccccceEEEEecCCCCCcceeEEEEEECCccccCCcCceeecCceeccCCeEEEEEEEeCccchhccccCCCCCCcCH
Q 002029 4 DSNFQNFKAIIRCEDPNANLYTFVGSLELEEQQYPLTPQQLLLRDSKLRNTDCIYGAVIFTGRDTKVFQNSTGPPSKRSK 83 (978)
Q Consensus 4 ~~~~~~~~g~i~~e~p~~~l~~f~G~~~~~~~~~pl~~~n~l~~Gs~l~~tg~~~gvVv~tG~~Tki~~~~~~~~~k~s~ 83 (978)
++.+.+++|.|+||+||.++|.|+|++..+++..|++++|+++|||+++||.|++|+|++||++||+|+|+.+++.|+|+
T Consensus 192 ~~~~~~~~~~i~cE~p~~~ly~f~g~l~~~~~~~pl~~~~~Llrg~~lrNT~~v~G~vv~tG~dtK~~~n~~~~~~Krs~ 271 (1151)
T KOG0206|consen 192 EDSLKNFKGWIECEDPNANLYTFVGNLELQGQIYPLSPDNLLLRGSRLRNTEWVYGVVVFTGHDTKLMQNSGKPPSKRSR 271 (1151)
T ss_pred cccccccCCceEEcCCcccHhhhhhheeeccCCCCCcHHHcccCCceeccCcEEEEEEEEcCCcchHHHhcCCCccccch
Confidence 45578899999999999999999999998877779999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccccccccccccCCCCCCCcCCchhhHHHHHHHHHHHHHHHhccccc
Q 002029 84 VERRMDKIIYFLFGILVLMSFIGSIFFGIATREDLQDGKMKRWYLRPDDTTAYYDPKRAAVAAVLHFLTALMLYGYLIPI 163 (978)
Q Consensus 84 l~~~~n~~~~~~~~~~~~~~~i~~i~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~iP~ 163 (978)
+++.+|..+..++++++++|++++++.++|......... ..||+..+. .....+..|++++++++.+||+
T Consensus 272 ier~~n~~i~~~~~~l~~~~~~~~i~~~~~~~~~~~~~~-~~~~~~~~~---------~~~~~~~~f~t~~il~~~liPI 341 (1151)
T KOG0206|consen 272 IERKMNKIIILLFVLLILMCLISAIGFAIWTRQDGRHNG-EWWYLSPSE---------AAYAGFVHFLTFIILYQYLIPI 341 (1151)
T ss_pred hhhhhhhhHHHHHHHHHHHHHHHHhhhheeeeecccccC-chhhhcCch---------HHHHHHHHHHHHHhhhhceEEE
Confidence 999999999999999999999999999998874322111 367776532 3456788999999999999999
Q ss_pred hhhhhHHHHHHHHHHHHhhccccccccCCCcccccCcccccccccceEEEeeCCcccccCeeEEEEEEECCeeeCCCchH
Q 002029 164 SLYVSIEIVKILQSIFINQDLHMYYEETDKPARARTSNLNEELGQVDTILSDKTGTLTCNSMEFIKCSIAGTSYGRGVTE 243 (978)
Q Consensus 164 sL~v~i~~~~~~~~~~i~~d~~m~~~~~~~~~~~r~~~~~e~Lg~v~~I~sDKTGTLT~n~m~~~~~~i~~~~y~~~~~~ 243 (978)
|||+++|+++++|+.||++|.+||+++++.++.+|+++++|+||||+||++|||||||+|.|+|++|+++|..|+...++
T Consensus 342 SLyvsiEiik~~qs~fi~~D~~my~~e~d~~~~~rtsnl~eeLGqv~yIfSDKTGTLT~N~M~F~kCsi~g~~yg~~~~~ 421 (1151)
T KOG0206|consen 342 SLYVSIEIVKVLQSIFINNDLDMYDEETDTPAQARTSNLNEELGQVEYIFSDKTGTLTQNSMEFKKCSINGTSYGRNVTE 421 (1151)
T ss_pred EEEEEeeehHHHHHHHcchHHHhhhccCCCccccccCCchhhhcceeEEEEcCcCccccceeeeecccccCcccccCCCh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999987665
Q ss_pred HHHHHHhhcCCCCccchhhhhhcccccCCcccCchhhhcCCCCCCCChHHHHHHHHHHhhhcceeccccCCCCcEEEecC
Q 002029 244 VERAMARRKGSPLEEEVTEEQEDKASIKGFNFEDERIMNGSWVNEPHADVIQKFLRLLAICHTALPEVDEENGKISYEAE 323 (978)
Q Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~lalC~~~~~~~~~~~~~~~y~~~ 323 (978)
.+....++.+.. ......+++.|.|++++++.+...++++..++|++++|+||++.++.+++++.+.|+++
T Consensus 422 ~~~~~~~~~~~~---------~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~f~~~la~chtv~~e~~~~~~~~~Y~A~ 492 (1151)
T KOG0206|consen 422 VEAALAKRSGGD---------VNEHKIKGFTFEDSRLVDGLWSSEPQAEDILEFFRALALCHTVIPEKDEDSGKLSYEAE 492 (1151)
T ss_pred hhcccCcccccc---------ccccccccceeccchhhccccccccCcchHHHHhhHHhccceeeeccCCCccceeeecC
Confidence 432222111100 01123467889999999988888889999999999999999999998766679999999
Q ss_pred CccHHHHHHHHHHcCCEEEeecCceeEEEecCCCCCccceeEeeEeEeecCCCCCceEEEEEEeCCCeEEEEEeCCchHH
Q 002029 324 SPDEAAFVIAARELGFEFYERTQTSISVHELDPVTGTKVERSYSLLNVLEFSSSRKRMSVIVRSEEGTLLLLSKGADSVM 403 (978)
Q Consensus 324 sp~E~Alv~~a~~~g~~~~~r~~~~~~i~~~~~~~~~~~~~~~~il~~~~F~s~rkrmsviv~~~~~~~~l~~KGa~~~i 403 (978)
||||.|||++|+++|+.+..|+++.+.+...+. +++|++|+++||+|+|||||||||+|+|++++||||||++|
T Consensus 493 SPDE~AlV~aAr~~gf~f~~Rt~~~vti~~~g~------~~~y~lL~iLeF~S~RKRMSVIVR~p~g~i~LycKGADsvI 566 (1151)
T KOG0206|consen 493 SPDEAALVEAARELGFVFLGRTPDSVTIRELGV------EETYELLNVLEFNSTRKRMSVIVRDPDGRILLYCKGADSVI 566 (1151)
T ss_pred CCcHHHHHHHHHhcCceeeeccCceEEEecccc------ceeEEEEEEeccccccceeEEEEEcCCCcEEEEEcCcchhh
Confidence 999999999999999999999999999995552 48999999999999999999999999999999999999999
Q ss_pred HHHhcccchhhHHHHHHHHHHHHHccceeEeeEEEeCCHHHHHHHHHHHHHHhhcccccHHHHHHHHHHHhhcccEEEEE
Q 002029 404 FERLAENGREFEEQTKEHINEYADAGLRTLILAYRELDEKEYKQFNEEFTEAKNSVSADREELAEEIAEKIEKNLILLGA 483 (978)
Q Consensus 404 ~~~~~~~~~~~~~~~~~~l~~~a~~Glr~l~~A~r~l~~~e~~~~~~~~~~a~~~l~~~r~~~~~~~~~~ie~dl~llG~ 483 (978)
++++..+++...+.+.+|+++||.+||||||+|||+++++||++|+++|++|++++ .||+++++++++.+|+||+++|+
T Consensus 567 ~erL~~~~~~~~e~T~~Hl~~yA~eGLRTLc~A~r~l~e~eY~~w~~~~~~A~ts~-~~Re~~L~e~ae~iEk~L~LLGA 645 (1151)
T KOG0206|consen 567 FERLSKNGEKLREKTQEHLEEYATEGLRTLCLAYRELDEEEYEEWNERYNEAKTSL-TDREELLDEVAEEIEKDLILLGA 645 (1151)
T ss_pred HhhhhhcchHHHHHHHHHHHHHHhhhhhHhhhhhhccCHHHHHHHHHHHHHHHhhc-cCHHHHHHHHHHHHHhcchhhcc
Confidence 99999888889999999999999999999999999999999999999999999999 79999999999999999999999
Q ss_pred EeeccccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCccccCceEEEEecCCCcccccchhhhHHHHHHHHHH
Q 002029 484 TAVEDKLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQGMRQVIISSETPESKTLEKSEDKSAAAAALKA 563 (978)
Q Consensus 484 i~ieD~lr~~v~~~I~~L~~aGIkv~mlTGD~~~tA~~ia~~~gl~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~ 563 (978)
+||||+||+|||++|+.|++||||+|||||||+|||++||.+|+++.+++..+.++..+.+..... +... ...+
T Consensus 646 TAIEDkLQdgVPetI~~L~~AGIKIWVLTGDK~ETAiNIg~sC~Ll~~~m~~i~i~~~~~~~~~~~-----~~~~-~~~~ 719 (1151)
T KOG0206|consen 646 TAIEDKLQDGVPETIAKLAQAGIKIWVLTGDKQETAINIGYSCRLLRQDMKLIIINTETSEELSSL-----DATA-ALKE 719 (1151)
T ss_pred eeeechhccCchHHHHHHHHcCCEEEEEcCcHHHHHHHHHHhhcCCCCCceEEEEecCChhhhcch-----hhHH-HHHH
Confidence 999999999999999999999999999999999999999999999999999999988764411111 1111 2223
Q ss_pred HHHHHHHhhhhhhccccCCCCCeEEEEcCchhhhhchhhHHHHHHHHHhccCeeEEEeCCchhHHHHHHHHHccCCCeEE
Q 002029 564 SVLHQLIRGKELLDSSNESLGPLALIIDGKSLTYALEDDVKDLFLELAIGCASVICCRSSPKQKALVTRLVKTKTSSTTL 643 (978)
Q Consensus 564 ~~~~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~f~~l~~~~~~vi~~r~sP~qK~~iV~~lk~~~~~~v~ 643 (978)
.+..+..........+... ...+++|||+++.++++++.+..|..++..|++|+|||+||.||+.+|+++|+..+.+++
T Consensus 720 ~l~~~~~~~~~~~~~~~~~-~~~aLVIDGktl~~aL~~~~~~~Fl~la~~C~sViCCR~sPlQKA~Vv~lVk~~~~~~TL 798 (1151)
T KOG0206|consen 720 TLLRKFTEELEEAKLEHSE-KPFALVIDGKTLAYALEDELRKKFLELAKRCKSVICCRVSPLQKALVVKLVKKGLKAVTL 798 (1151)
T ss_pred HHHHhhhHHHHHHhhccCc-CCceEEEECHHHHhhhCchhhHHHHHHHHhcCEEEEccCCHHHHHHHHHHHHhcCCceEE
Confidence 3333332222222111111 479999999999999999888999999999999999999999999999999977899999
Q ss_pred EEcCCcCCHHHhhhccccccccCCccchhccccceehhchhhhHHHHHHhhhhhhhHhhHhHHHHHHHHHHHHHHHHHHH
Q 002029 644 AIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDIAIAQFRFLERLLLVHGHWCYRRISSMICYFFYKNIAFGFTLFFFE 723 (978)
Q Consensus 644 aiGDG~ND~~ml~~AdvGI~i~g~e~~~a~~asD~vi~~f~~l~~lll~~gR~~~~~i~~~i~~~~~~n~~~~~~~~~~~ 723 (978)
|||||+||++|+|+|||||||+|.||+||+++|||++.+|++|.+||++||||+|.|++++++|+||||+.+++++|||+
T Consensus 799 AIGDGANDVsMIQ~AhVGVGIsG~EGmQAvmsSD~AIaqFrfL~rLLLVHGhW~Y~R~a~~ilyfFYKNi~f~~~~fwy~ 878 (1151)
T KOG0206|consen 799 AIGDGANDVSMIQEAHVGVGISGQEGMQAVMSSDFAIAQFRFLERLLLVHGHWSYIRLAKMILYFFYKNIAFTFTLFWYQ 878 (1151)
T ss_pred EeeCCCccchheeeCCcCeeeccchhhhhhhcccchHHHHHHHhhhheeecceeHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhhccccccchhhHHHHHHHHHHhhhhHhhhhccccCCChHHhhhCccchhcccccccccHHHHHHHHHHHHHHHHHHHH
Q 002029 724 AYASFSGQPVYNDWFLSLYNVFFTSLPVIALGVFDQDVSARFCLKFPLLYQEGVQNILFSWTRILGWALNGVANAAIIFF 803 (978)
Q Consensus 724 ~~~~~s~~~~~~~~~~~~~n~i~~~~p~~~l~~~~~~~~~~~~~~~P~ly~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ 803 (978)
++++|||++++++|++.+||++||++|++++|++|||++.++++++|+||+.++++..|+++.|+.|++.|++|++++|+
T Consensus 879 f~~gfSgq~~yd~~~l~lyNv~FTSlPvi~lGvfdqDvsa~~~l~~P~LY~~g~~~~~f~~~~f~~~~~~g~~~sli~Ff 958 (1151)
T KOG0206|consen 879 FFNGFSGQTLYDDWYLSLYNVLFTSLPVIVLGVFDQDVSAETLLRFPELYQRGQLNLLFNWKRFWGWMLDGFYQSLVIFF 958 (1151)
T ss_pred hcCCCCCCccccceEEEEEeEEeecCchhheeecccCCCHHHHhhCCcchhhhhhccccchHHHHHHHHHHHHhheeeee
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhhccccccCCCceehhhHHHHHHHHHHHHHHHHHHHHhhcchhhHHHHHHHHHHHHHHHHHHHHhccCccccc-hh
Q 002029 804 FCIHAMKQQAFRKGGEVIGLEILGTTMYTCVVWVVNCQMALSVTYFTYIQHLFIWGGITFWYIFLLAYGAMDPYIST-TA 882 (978)
Q Consensus 804 ~~~~~~~~~~~~~~g~~~~~~~~~~~~f~~~v~~~~~~~~~~~~~~~~~~~~~i~~si~~~~i~~~i~~~i~~~~~~-~~ 882 (978)
+++..+.......+|.+.+.+.+|+.+||++|+++++++++++++|+|++|+.+|+|+++||++.+++...++.+.. ..
T Consensus 959 ~~~~~~~~~~~~~~G~~~d~~~~G~~~~T~~Vivv~~~iaL~~~ywT~i~~i~i~gSi~~~f~f~~iy~~~~~~~~~~~~ 1038 (1151)
T KOG0206|consen 959 LPYLVFEEQAVTSNGLTADYWTLGTTVFTIIVIVVNLKIALETSYWTWINHIVIWGSILLWFVFLFIYSELTPAISTPDP 1038 (1151)
T ss_pred eeHhhheeeeeccCCCcCChhhccceEEEEEEEEEEeeeeeeehheeHHHHHHHHHHHHHHHHHHHHHhccccccCCCcc
Confidence 99998876677889999999999999999999999999999999999999999999999999999999864433332 44
Q ss_pred HHHHHHHhcCChHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCHHHHHHHHHHcCC
Q 002029 883 YKVFIEACAPAPSFWLITLLVLMSSLLPYFTYSAIQMRFFPLHHQMIQWFRSDGQ 937 (978)
Q Consensus 883 ~~~~~~~~~~s~~~wl~il~~~~~~ll~~~~~k~~~r~~~p~~~~~~re~~~~~~ 937 (978)
|.+++.....+|.+|+.++++++++++|+++++.+++.++|++++++||+++..+
T Consensus 1039 ~~~~~~~~~~~p~fWl~~ll~~v~~Llp~~~~~~l~~~~~Pt~~~~i~~~~~~~~ 1093 (1151)
T KOG0206|consen 1039 FYGVAEHLLSSPSFWLTLLLTVVAALLPDFVYKSLQRTFFPTDHDIIQEIEKYRR 1093 (1151)
T ss_pred HHHHHHHHhcCchHHHHHHHHHHHHHhHHHHHHHHHHhhCCcHHHHHHHHHhccc
Confidence 5557888999999999999999999999999999999999999999999997443
No 2
>PLN03190 aminophospholipid translocase; Provisional
Probab=100.00 E-value=4.1e-151 Score=1407.52 Aligned_cols=898 Identities=37% Similarity=0.613 Sum_probs=755.1
Q ss_pred cccceEEEEecCCCCCcceeEEEEEECCccccCCcCceeecCceeccCCeEEEEEEEeCccchhccccCCCCCCcCHHHH
Q 002029 7 FQNFKAIIRCEDPNANLYTFVGSLELEEQQYPLTPQQLLLRDSKLRNTDCIYGAVIFTGRDTKVFQNSTGPPSKRSKVER 86 (978)
Q Consensus 7 ~~~~~g~i~~e~p~~~l~~f~G~~~~~~~~~pl~~~n~l~~Gs~l~~tg~~~gvVv~tG~~Tki~~~~~~~~~k~s~l~~ 86 (978)
..+++|.|+||.||+++|+|+|++.++|+..|++.+|+++|||+|+||+|++|+|||||+|||+++|..+++.|+|++|+
T Consensus 248 ~~~~~~~i~~e~Pn~~l~~F~G~i~~~~~~~~l~~~n~llRG~~LrnT~~i~GvVVYTG~dTK~~~N~~~~~~K~S~le~ 327 (1178)
T PLN03190 248 KEKINGLIKCEKPNRNIYGFQANMEVDGKRLSLGPSNIILRGCELKNTAWAIGVAVYCGRETKAMLNNSGAPSKRSRLET 327 (1178)
T ss_pred hhhceEEEEEeCCCccceeEEEEEEECCCcccCCccceeeccceecCCceEEEEEEEechhhhHhhcCCCCCCCccHHHH
Confidence 35689999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhhccccccccccccccCCCCCC---CcCCchhhHHHHHHHHHHHHHHHhccccc
Q 002029 87 RMDKIIYFLFGILVLMSFIGSIFFGIATREDLQDGKMKRWYLRPDDTT---AYYDPKRAAVAAVLHFLTALMLYGYLIPI 163 (978)
Q Consensus 87 ~~n~~~~~~~~~~~~~~~i~~i~~~~~~~~~~~~~~~~~~y~~~~~~~---~~~~~~~~~~~~~~~~~~~l~l~~~~iP~ 163 (978)
.+|+++.+++++++++|++++++..+|......+..+..||+..+... ..++...+....+..|+++++++..+||+
T Consensus 328 ~~N~~vi~l~~i~~~l~~i~~i~~~~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~lil~~~~IPI 407 (1178)
T PLN03190 328 RMNLEIIILSLFLIALCTIVSVCAAVWLRRHRDELDTIPFYRRKDFSEGGPKNYNYYGWGWEIFFTFLMSVIVFQIMIPI 407 (1178)
T ss_pred HHhHHHHHHHHHHHHHHHHHHHHHHhhhccccccccccccccccccccccccccccchhhHHHHHHHHHHHHHHHhhcce
Confidence 999999999999999999999888777643322211223444221110 00111112234466788899999999999
Q ss_pred hhhhhHHHHHHHHHHHHhhccccccccCCCcccccCcccccccccceEEEeeCCcccccCeeEEEEEEECCeeeCCCchH
Q 002029 164 SLYVSIEIVKILQSIFINQDLHMYYEETDKPARARTSNLNEELGQVDTILSDKTGTLTCNSMEFIKCSIAGTSYGRGVTE 243 (978)
Q Consensus 164 sL~v~i~~~~~~~~~~i~~d~~m~~~~~~~~~~~r~~~~~e~Lg~v~~I~sDKTGTLT~n~m~~~~~~i~~~~y~~~~~~ 243 (978)
||+|++|++|++|+++|++|.+||+++.+.++.+|+++++|+||+|+|||||||||||+|+|+|++|+++|..|+.+...
T Consensus 408 SL~Vtleivk~~qa~~I~~D~~m~~~~~~~~~~vr~snl~EeLGqV~yIfSDKTGTLT~N~M~fk~~~i~g~~y~~~~~~ 487 (1178)
T PLN03190 408 SLYISMELVRVGQAYFMIRDDQMYDEASNSRFQCRALNINEDLGQIKYVFSDKTGTLTENKMEFQCASIWGVDYSDGRTP 487 (1178)
T ss_pred eeeeeHHHHHHHHHHHHHhhhhcccccCCCcceeccCcchhhhccceEEEEcCCCccccceEEEEEEEECCEEccccccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999753221
Q ss_pred HHHHHHhhcCCCCccchhhhhhcccccCCcc-cCchhhhcCCC--CCCCChHHHHHHHHHHhhhcceeccccCC--C---
Q 002029 244 VERAMARRKGSPLEEEVTEEQEDKASIKGFN-FEDERIMNGSW--VNEPHADVIQKFLRLLAICHTALPEVDEE--N--- 315 (978)
Q Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~l~~~~~--~~~~~~~~~~~~~~~lalC~~~~~~~~~~--~--- 315 (978)
.+.... ......+ +....+..+ +.++.+.+... ...+..+.+++|++++|+||++.++..++ +
T Consensus 488 ~~~~~~-~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~fl~~lalChtv~~~~~~~~~~~~~ 558 (1178)
T PLN03190 488 TQNDHA-GYSVEVD--------GKILRPKMKVKVDPQLLELSKSGKDTEEAKHVHDFFLALAACNTIVPIVVDDTSDPTV 558 (1178)
T ss_pred chhhhh-ccccccc--------cccccccccccCCHHHHhhhhccccchhhHHHHHHHHHHHhcCCceeeccCCCCCccc
Confidence 110000 0000000 000000001 12233322111 11122346789999999999999853211 1
Q ss_pred CcEEEecCCccHHHHHHHHHHcCCEEEeecCceeEEEecCCCCCccceeEeeEeEeecCCCCCceEEEEEEeCCCeEEEE
Q 002029 316 GKISYEAESPDEAAFVIAARELGFEFYERTQTSISVHELDPVTGTKVERSYSLLNVLEFSSSRKRMSVIVRSEEGTLLLL 395 (978)
Q Consensus 316 ~~~~y~~~sp~E~Alv~~a~~~g~~~~~r~~~~~~i~~~~~~~~~~~~~~~~il~~~~F~s~rkrmsviv~~~~~~~~l~ 395 (978)
+.+.|+|+||||.||+++|+++|+.+..|+++.+.+...+. +.+|++++++||+|+|||||||++++++++++|
T Consensus 559 ~~~~Y~a~SPdE~ALv~~a~~~G~~l~~r~~~~i~i~~~~~------~~~~~il~~~pF~S~rKrMSvIv~~~~~~~~l~ 632 (1178)
T PLN03190 559 KLMDYQGESPDEQALVYAAAAYGFMLIERTSGHIVIDIHGE------RQRFNVLGLHEFDSDRKRMSVILGCPDKTVKVF 632 (1178)
T ss_pred cceEEecCCCcHHHHHHHHHHCCCeEecccCCeEEEeeccc------eecceeEEEecccccccEEEEEEEcCCCcEEEE
Confidence 24689999999999999999999999999999998887665 388999999999999999999999998999999
Q ss_pred EeCCchHHHHHhccc-chhhHHHHHHHHHHHHHccceeEeeEEEeCCHHHHHHHHHHHHHHhhcccccHHHHHHHHHHHh
Q 002029 396 SKGADSVMFERLAEN-GREFEEQTKEHINEYADAGLRTLILAYRELDEKEYKQFNEEFTEAKNSVSADREELAEEIAEKI 474 (978)
Q Consensus 396 ~KGa~~~i~~~~~~~-~~~~~~~~~~~l~~~a~~Glr~l~~A~r~l~~~e~~~~~~~~~~a~~~l~~~r~~~~~~~~~~i 474 (978)
|||||++|+++|++. +....+.+.+++++|+.+|+||||+|||+++++|+++|.++|++|+.++ .+|+++++++.+.+
T Consensus 633 ~KGA~e~il~~~~~~~~~~~~~~~~~~l~~~a~~GlRtL~lA~k~l~~~e~~~~~~~~~~a~~~~-~~r~~~l~~~~~~i 711 (1178)
T PLN03190 633 VKGADTSMFSVIDRSLNMNVIRATEAHLHTYSSLGLRTLVVGMRELNDSEFEQWHFSFEAASTAL-IGRAALLRKVASNV 711 (1178)
T ss_pred EecCcHHHHHhhcccccchhHHHHHHHHHHHHhcCCceEEEEEEeCCHHHHhhHHHHHHHhhhhh-hhhHHHHHhhHHhh
Confidence 999999999999864 3356778899999999999999999999999999999999999999999 99999999999999
Q ss_pred hcccEEEEEEeeccccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCccccCceEEEEecCCCcccccchhhhH
Q 002029 475 EKNLILLGATAVEDKLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQGMRQVIISSETPESKTLEKSEDK 554 (978)
Q Consensus 475 e~dl~llG~i~ieD~lr~~v~~~I~~L~~aGIkv~mlTGD~~~tA~~ia~~~gl~~~~~~~i~i~~~~~~~~~~~~~~~~ 554 (978)
|+||+++|+++++|+||++++++|+.|++|||++||+|||+.+||++||++|||+++++..+.++.++.+. ..
T Consensus 712 E~dL~~lG~~~~~D~lr~~v~~~I~~l~~agi~v~mlTGD~~~tAi~IA~s~~Ll~~~~~~i~i~~~~~~~-------~~ 784 (1178)
T PLN03190 712 ENNLTILGASAIEDKLQQGVPEAIESLRTAGIKVWVLTGDKQETAISIGYSSKLLTNKMTQIIINSNSKES-------CR 784 (1178)
T ss_pred hcCcEEEEEEEEecCCchhHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHhCCCCCCCeeEEecCCchhh-------HH
Confidence 99999999999999999999999999999999999999999999999999999999998888876654211 11
Q ss_pred HHHHHHHHHHHHHHHHh---hhhh-hccccCCCCCeEEEEcCchhhhhchhhHHHHHHHHHhccCeeEEEeCCchhHHHH
Q 002029 555 SAAAAALKASVLHQLIR---GKEL-LDSSNESLGPLALIIDGKSLTYALEDDVKDLFLELAIGCASVICCRSSPKQKALV 630 (978)
Q Consensus 555 ~~~~~~~~~~~~~~~~~---~~~~-~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~f~~l~~~~~~vi~~r~sP~qK~~i 630 (978)
..++...... .+... ..+. ...........+++++|.++..++++++++.|.+++..|++|||||++|+||+++
T Consensus 785 ~~l~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~lVIdG~~L~~~l~~~~~~~f~~l~~~~~~VI~cR~sP~QKa~I 862 (1178)
T PLN03190 785 KSLEDALVMS--KKLTTVSGISQNTGGSSAAASDPVALIIDGTSLVYVLDSELEEQLFQLASKCSVVLCCRVAPLQKAGI 862 (1178)
T ss_pred HHHHHHhhhh--hhccccccccccccccccccCCceEEEEEcHHHHHHhhhHHHHHHHHHHHhCCEEEEecCCHHHHHHH
Confidence 1111111000 00000 0000 0011123456789999999999998888889999999999999999999999999
Q ss_pred HHHHHccCCCeEEEEcCCcCCHHHhhhccccccccCCccchhccccceehhchhhhHHHHHHhhhhhhhHhhHhHHHHHH
Q 002029 631 TRLVKTKTSSTTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDIAIAQFRFLERLLLVHGHWCYRRISSMICYFFY 710 (978)
Q Consensus 631 V~~lk~~~~~~v~aiGDG~ND~~ml~~AdvGI~i~g~e~~~a~~asD~vi~~f~~l~~lll~~gR~~~~~i~~~i~~~~~ 710 (978)
|+.+|+..+++|+|||||+||++|||+||||||++|+||.||+++|||+|.+|++|.+||++|||++|+|++++++|+||
T Consensus 863 V~~vk~~~~~vtlaIGDGaNDv~mIq~AdVGIGIsG~EG~qA~~aSDfaI~~Fr~L~rLLlvHGr~~y~R~s~~i~y~fY 942 (1178)
T PLN03190 863 VALVKNRTSDMTLAIGDGANDVSMIQMADVGVGISGQEGRQAVMASDFAMGQFRFLVPLLLVHGHWNYQRMGYMILYNFY 942 (1178)
T ss_pred HHHHHhcCCcEEEEECCCcchHHHHHhcCeeeeecCchhHHHHHhhccchhhhHHHHHHHHHhCHHHHHHHHHHHHHHHH
Confidence 99999855689999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHhhccccccchhhHHHHHHHHHHhhhhHhhhhccccCCChHHhhhCccchhcccccccccHHHHHHH
Q 002029 711 KNIAFGFTLFFFEAYASFSGQPVYNDWFLSLYNVFFTSLPVIALGVFDQDVSARFCLKFPLLYQEGVQNILFSWTRILGW 790 (978)
Q Consensus 711 ~n~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~n~i~~~~p~~~l~~~~~~~~~~~~~~~P~ly~~~~~~~~~~~~~~~~~ 790 (978)
||+++++++|||+++++|||+++|++|.+++||++||++|++++|++|+|++++.++++|+||+.+++++.++.+.|+.|
T Consensus 943 KN~~~~~~qf~f~~~~~fSg~~ly~~~~~~~yN~~fTslPii~~~ifD~dv~~~~l~~~P~LY~~~~~~~~~n~~~F~~w 1022 (1178)
T PLN03190 943 RNAVFVLVLFWYVLFTCFTLTTAINEWSSVLYSVIYTALPTIVVGILDKDLSRRTLLKYPQLYGAGQRQEAYNSKLFWLT 1022 (1178)
T ss_pred HHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHhHHHHHHHHhcccCCHHHHHhCcHhhhhhccCCccCHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHhhccccccCCCceehhhHHHHHHHHHHHHHHHHHHHHhhcchhhHHHHHHHHHHHHHHHHHHH
Q 002029 791 ALNGVANAAIIFFFCIHAMKQQAFRKGGEVIGLEILGTTMYTCVVWVVNCQMALSVTYFTYIQHLFIWGGITFWYIFLLA 870 (978)
Q Consensus 791 ~~~~~~~s~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~f~~~v~~~~~~~~~~~~~~~~~~~~~i~~si~~~~i~~~i 870 (978)
++.|+|||+++|+++++.+.... .+.+.+++++++++++++++++++.+++|+|+++.++|+|+++++++.++
T Consensus 1023 ~~~~i~qs~iiff~~~~~~~~~~-------~~~~~~~~~~~~~~v~~vnl~i~~~~~~wt~~~~~~i~~Si~~~~i~~~~ 1095 (1178)
T PLN03190 1023 MIDTLWQSAVVFFVPLFAYWAST-------IDGSSIGDLWTLAVVILVNLHLAMDIIRWNWITHAAIWGSIVATFICVIV 1095 (1178)
T ss_pred HHHHHHHHHHHHHHHHHHhcCCC-------cCceeEhHhhhhHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999888765321 12334577888899999999999999999999999999999999999988
Q ss_pred HhccCccccchhHHHHHHHhcCChHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCHHHHHHHHHHcCCCCC
Q 002029 871 YGAMDPYISTTAYKVFIEACAPAPSFWLITLLVLMSSLLPYFTYSAIQMRFFPLHHQMIQWFRSDGQTDD 940 (978)
Q Consensus 871 ~~~i~~~~~~~~~~~~~~~~~~s~~~wl~il~~~~~~ll~~~~~k~~~r~~~p~~~~~~re~~~~~~~~~ 940 (978)
+..+|.. . .|+.+ ..+..+|.||+.++++++++++|+++++++++.|+|++++++||.++....++
T Consensus 1096 ~~~~~~~-~--~~~~~-~~~~~~~~fwl~ill~~~~~l~p~~~~~~~~~~~~P~~~~~~~~~~~~~~~~~ 1161 (1178)
T PLN03190 1096 IDAIPTL-P--GYWAI-FHIAKTGSFWLCLLAIVVAALLPRFVVKVLYQYFTPCDVQIAREAEKFGTFRE 1161 (1178)
T ss_pred HHhcccc-h--hHHHH-HHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHhccccc
Confidence 8877632 2 24433 35678999999999999999999999999999999999999999776655333
No 3
>TIGR01652 ATPase-Plipid phospholipid-translocating P-type ATPase, flippase. This model describes the P-type ATPase responsible for transporting phospholipids from one leaflet of bilayer membranes to the other. These ATPases are found only in eukaryotes.
Probab=100.00 E-value=8.9e-142 Score=1341.97 Aligned_cols=891 Identities=51% Similarity=0.866 Sum_probs=763.9
Q ss_pred cccccceEEEEecCCCCCcceeEEEEEECC-ccccCCcCceeecCceeccCCeEEEEEEEeCccchhccccCCCCCCcCH
Q 002029 5 SNFQNFKAIIRCEDPNANLYTFVGSLELEE-QQYPLTPQQLLLRDSKLRNTDCIYGAVIFTGRDTKVFQNSTGPPSKRSK 83 (978)
Q Consensus 5 ~~~~~~~g~i~~e~p~~~l~~f~G~~~~~~-~~~pl~~~n~l~~Gs~l~~tg~~~gvVv~tG~~Tki~~~~~~~~~k~s~ 83 (978)
+++.+++|.|+||.||+++|+|.|.+.+++ +..|++.+|+++|||.|+||||++|+|+|||++||+++|...++.|+|+
T Consensus 163 ~~~~~~~~~i~~~~p~~~l~~F~G~~~~~~~~~~~l~~~N~l~rGs~l~nt~~~~gvVvyTG~~Tk~~~n~~~~~~k~s~ 242 (1057)
T TIGR01652 163 DDIKNFSGEIECEQPNASLYSFQGNMTINGDRQYPLSPDNILLRGCTLRNTDWVIGVVVYTGHDTKLMRNATQAPSKRSR 242 (1057)
T ss_pred hhHhhceEEEEEcCCCCcceEEEEEEEECCCCcccCCHHHhHhcCCEecCCCeEEEEEEEEchhhhhhhcCCCCcccccH
Confidence 445678999999999999999999999987 7889999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccccccccccccCCCCCCCcCCchhhHHHHHHHHHHHHHHHhccccc
Q 002029 84 VERRMDKIIYFLFGILVLMSFIGSIFFGIATREDLQDGKMKRWYLRPDDTTAYYDPKRAAVAAVLHFLTALMLYGYLIPI 163 (978)
Q Consensus 84 l~~~~n~~~~~~~~~~~~~~~i~~i~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~iP~ 163 (978)
+|+.+|+++.+++.+++++|++++++..+|...... ..||+..+.. ..+.....+..+++++++++.+||+
T Consensus 243 le~~ln~~~~~l~~~~i~l~~i~~i~~~~~~~~~~~----~~~yl~~~~~-----~~~~~~~~~~~~~~~~~L~~~~IPi 313 (1057)
T TIGR01652 243 LEKELNFLIIILFCLLFVLCLISSVGAGIWNDAHGK----DLWYIRLDVS-----ERNAAANGFFSFLTFLILFSSLIPI 313 (1057)
T ss_pred HHHHHhhHHHHHHHHHHHHHHHHHHHHHheecccCC----CccceecCcc-----cccchhHHHHHHHHHHHHHhhhcce
Confidence 999999999999999999999998877676643222 2688764321 1222344566889999999999999
Q ss_pred hhhhhHHHHHHHHHHHHhhccccccccCCCcccccCcccccccccceEEEeeCCcccccCeeEEEEEEECCeeeCCCchH
Q 002029 164 SLYVSIEIVKILQSIFINQDLHMYYEETDKPARARTSNLNEELGQVDTILSDKTGTLTCNSMEFIKCSIAGTSYGRGVTE 243 (978)
Q Consensus 164 sL~v~i~~~~~~~~~~i~~d~~m~~~~~~~~~~~r~~~~~e~Lg~v~~I~sDKTGTLT~n~m~~~~~~i~~~~y~~~~~~ 243 (978)
+||+++++++++++++|++|.+||+++.++++++|+++++|+||+|+|||||||||||+|+|+|++|+++|..|+.+..+
T Consensus 314 sL~v~l~l~~~~~~~~i~~D~~m~~~~~~~~~~vr~~~~~E~LG~v~~I~sDKTGTLT~N~M~~~~~~i~g~~y~~~~~~ 393 (1057)
T TIGR01652 314 SLYVSLELVKSVQAYFINSDLQMYHEKTDTPASVRTSNLNEELGQVEYIFSDKTGTLTQNIMEFKKCSIAGVSYGDGFTE 393 (1057)
T ss_pred eeeehHHHHHHHHHHHHhhhhhhhccccCCcceeecCCChHHhcCeeEEEEcCCCceeeeeEEEEEEEECCEEecCCcch
Confidence 99999999999999999999999988778899999999999999999999999999999999999999999999865432
Q ss_pred HHHHHHhhcCCCCccchhhhhhcccccCCcccCchhhhcCCCCCCCChHHHHHHHHHHhhhcceeccc-cCCCCcEEEec
Q 002029 244 VERAMARRKGSPLEEEVTEEQEDKASIKGFNFEDERIMNGSWVNEPHADVIQKFLRLLAICHTALPEV-DEENGKISYEA 322 (978)
Q Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~lalC~~~~~~~-~~~~~~~~y~~ 322 (978)
......+..+...+... ......+..+|.++++.+.....++..+.+++|++++++||++.++. +++.+.+.|++
T Consensus 394 ~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~lC~~v~~~~~~~~~~~~~y~~ 469 (1057)
T TIGR01652 394 IKDAIRERLGSYVENEN----SMLVESKGFTFVDPRLVDLLKTNKPNAKRINEFFLALALCHTVVPEFNDDGPEEITYQA 469 (1057)
T ss_pred HHHHhhhcccccccccc----cccccccccccCcHHHHHhhhcCCchhHHHHHHHHHHHhcCcccccccCCCCCceEEEc
Confidence 21111111110000000 00001122345565555433223344567889999999999999875 23334588999
Q ss_pred CCccHHHHHHHHHHcCCEEEeecCceeE--EEecCCCCCccceeEeeEeEeecCCCCCceEEEEEEeCCCeEEEEEeCCc
Q 002029 323 ESPDEAAFVIAARELGFEFYERTQTSIS--VHELDPVTGTKVERSYSLLNVLEFSSSRKRMSVIVRSEEGTLLLLSKGAD 400 (978)
Q Consensus 323 ~sp~E~Alv~~a~~~g~~~~~r~~~~~~--i~~~~~~~~~~~~~~~~il~~~~F~s~rkrmsviv~~~~~~~~l~~KGa~ 400 (978)
+||+|.||+++|+++|+.+.+|+++.+. +...+. ...|++++++||+|+||||||+++++++++++|+||||
T Consensus 470 ~sp~E~ALl~~a~~~g~~~~~~~~~~~~~~i~~~~~------~~~~~il~~~pF~s~rKrmSviv~~~~~~~~l~~KGA~ 543 (1057)
T TIGR01652 470 ASPDEAALVKAARDVGFVFFERTPKSISLLIEMHGE------TKEYEILNVLEFNSDRKRMSVIVRNPDGRIKLLCKGAD 543 (1057)
T ss_pred cCCcHHHHHHHHHHCCCEEEEecCCceEEEEEeCCC------EEEEEEEEecccCCCCCeEEEEEEeCCCeEEEEEeCcH
Confidence 9999999999999999999999988443 433333 47899999999999999999999999889999999999
Q ss_pred hHHHHHhcccchhhHHHHHHHHHHHHHccceeEeeEEEeCCHHHHHHHHHHHHHHhhcccccHHHHHHHHHHHhhcccEE
Q 002029 401 SVMFERLAENGREFEEQTKEHINEYADAGLRTLILAYRELDEKEYKQFNEEFTEAKNSVSADREELAEEIAEKIEKNLIL 480 (978)
Q Consensus 401 ~~i~~~~~~~~~~~~~~~~~~l~~~a~~Glr~l~~A~r~l~~~e~~~~~~~~~~a~~~l~~~r~~~~~~~~~~ie~dl~l 480 (978)
++|+++|...++...+.+.+++++|+.+|+|||++|||.++++|+++|.++|++|+.++ .+|++.+++..+.+|+||+|
T Consensus 544 e~il~~~~~~~~~~~~~~~~~~~~~a~~GlRtL~~A~k~l~~~e~~~~~~~~~~a~~~~-~~r~~~~~~~~~~iE~~L~~ 622 (1057)
T TIGR01652 544 TVIFKRLSSGGNQVNEETKEHLENYASEGLRTLCIAYRELSEEEYEEWNEEYNEASTAL-TDREEKLDVVAESIEKDLIL 622 (1057)
T ss_pred HHHHHHhhccchhHHHHHHHHHHHHHHcCCcEEEEEEEECCHHHHHHHHHHHHHHHhhh-hhHHHHHHHHHHHHHhcCEE
Confidence 99999998654556788899999999999999999999999999999999999999998 89999999999999999999
Q ss_pred EEEEeeccccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCccccCceEEEEecCCCcccccchhhhHHHHHHH
Q 002029 481 LGATAVEDKLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQGMRQVIISSETPESKTLEKSEDKSAAAAA 560 (978)
Q Consensus 481 lG~i~ieD~lr~~v~~~I~~L~~aGIkv~mlTGD~~~tA~~ia~~~gl~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~ 560 (978)
+|++|+|||||+||+++|+.|++||||+||+|||+.+||++||++||++.++...+.++.++.+... .....+.
T Consensus 623 lG~~gieD~lq~~v~etI~~L~~AGIkv~mlTGD~~~TA~~IA~~~~ii~~~~~~~~i~~~~~~~~~----~~~~~i~-- 696 (1057)
T TIGR01652 623 LGATAIEDKLQEGVPETIELLRQAGIKIWVLTGDKVETAINIGYSCRLLSRNMEQIVITSESLDATR----SVEAAIK-- 696 (1057)
T ss_pred EEEEEEhhhhhhccHHHHHHHHHCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCeEEEEecCchhhhH----HHHHHHH--
Confidence 9999999999999999999999999999999999999999999999999988887777765422110 0001111
Q ss_pred HHHHHHHHHHhhhhhhccccCCCCCeEEEEcCchhhhhchhhHHHHHHHHHhccCeeEEEeCCchhHHHHHHHHHccCCC
Q 002029 561 LKASVLHQLIRGKELLDSSNESLGPLALIIDGKSLTYALEDDVKDLFLELAIGCASVICCRSSPKQKALVTRLVKTKTSS 640 (978)
Q Consensus 561 ~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~f~~l~~~~~~vi~~r~sP~qK~~iV~~lk~~~~~ 640 (978)
.+......... ........+++++|++++.+++++++++|.+++..|+++||||++|+||+++|+.+|+..|+
T Consensus 697 ------~~~~~~~~~~~-~~~~~~~~~lvi~G~~l~~~l~~~~~~~f~~l~~~~~~vV~aR~sP~qK~~IV~~lk~~~~~ 769 (1057)
T TIGR01652 697 ------FGLEGTSEEFN-NLGDSGNVALVIDGKSLGYALDEELEKEFLQLALKCKAVICCRVSPSQKADVVRLVKKSTGK 769 (1057)
T ss_pred ------HHHHHHHHhhh-hhccCCceEEEEccHHHHHHHhhHHHHHHHHHHhhCCEEEEeCCCHHHHHHHHHHHHhcCCC
Confidence 11111011110 01124567899999999999988888899999999999999999999999999999984499
Q ss_pred eEEEEcCCcCCHHHhhhccccccccCCccchhccccceehhchhhhHHHHHHhhhhhhhHhhHhHHHHHHHHHHHHHHHH
Q 002029 641 TTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDIAIAQFRFLERLLLVHGHWCYRRISSMICYFFYKNIAFGFTLF 720 (978)
Q Consensus 641 ~v~aiGDG~ND~~ml~~AdvGI~i~g~e~~~a~~asD~vi~~f~~l~~lll~~gR~~~~~i~~~i~~~~~~n~~~~~~~~ 720 (978)
+|+|||||+||++||++||||||++|+|+.||+.+|||++.+|++|.++|++|||++|+|+++++.|.||||++++++++
T Consensus 770 ~vl~iGDG~ND~~mlk~AdVGIgi~g~eg~qA~~aaD~~i~~F~~L~~lll~~GR~~~~r~~~~i~~~~~kn~~~~~~~~ 849 (1057)
T TIGR01652 770 TTLAIGDGANDVSMIQEADVGVGISGKEGMQAVMASDFAIGQFRFLTKLLLVHGRWSYKRISKMILYFFYKNLIFAIIQF 849 (1057)
T ss_pred eEEEEeCCCccHHHHhhcCeeeEecChHHHHHHHhhhhhhhhHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999998899999999999999999999999999999
Q ss_pred HHHHhhccccccchhhHHHHHHHHHHhhhhHhhhhccccCCChHHhhhCccchhcccccccccHHHHHHHHHHHHHHHHH
Q 002029 721 FFEAYASFSGQPVYNDWFLSLYNVFFTSLPVIALGVFDQDVSARFCLKFPLLYQEGVQNILFSWTRILGWALNGVANAAI 800 (978)
Q Consensus 721 ~~~~~~~~s~~~~~~~~~~~~~n~i~~~~p~~~l~~~~~~~~~~~~~~~P~ly~~~~~~~~~~~~~~~~~~~~~~~~s~~ 800 (978)
+|.++++|+|++++++++++|||+++|++|++++|++|+|++++.+.++|++|+.+++++.++.+.|+.|++.|++|+++
T Consensus 850 ~~~~~~~~s~~~~~~~~~l~~~n~~~t~lp~~~l~~~d~~~~~~~l~~~P~ly~~~~~~~~~~~~~f~~~~~~~~~~~~i 929 (1057)
T TIGR01652 850 WYSFYNGFSGQTLYEGWYMVLYNVFFTALPVISLGVFDQDVSASLSLRYPQLYREGQKGQGFSTKTFWGWMLDGIYQSLV 929 (1057)
T ss_pred HHHHHHcCCcHHHHHHHHHHHHHHHHHhHHHHHHHHhcccCCHHHHHhChHHHHHhhhcCCCCHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhhccccccCCCceehhhHHHHHHHHHHHHHHHHHHHHhhcchhhHHHHHHHHHHHHHHHHHHHHhccCccccc
Q 002029 801 IFFFCIHAMKQQAFRKGGEVIGLEILGTTMYTCVVWVVNCQMALSVTYFTYIQHLFIWGGITFWYIFLLAYGAMDPYIST 880 (978)
Q Consensus 801 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~f~~~v~~~~~~~~~~~~~~~~~~~~~i~~si~~~~i~~~i~~~i~~~~~~ 880 (978)
+|++.++.+.......+|...+.+.+++++|+++++++++++++.+++|+|+++..+|+|+++++++.+++..++. ..
T Consensus 930 i~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~wt~~~~~~~~~S~~~~~~~~~~~~~~~~--~~ 1007 (1057)
T TIGR01652 930 IFFFPMFAYILGDFVSSGSLDDFSSVGVIVFTALVVIVNLKIALEINRWNWISLITIWGSILVWLIFVIVYSSIFP--SP 1007 (1057)
T ss_pred HHHHHHHHHcCCccccCCcccchhhHHHHHHHHHHHHHHHHHHHHHhHhHHHHHHHHHHHHHHHHHHHHHHHhhcc--cc
Confidence 9999888876544446788889999999999999999999999999999999999999999999999888876542 33
Q ss_pred hhHHHHHHHhcCChHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCHHHHHHH
Q 002029 881 TAYKVFIEACAPAPSFWLITLLVLMSSLLPYFTYSAIQMRFFPLHHQMIQW 931 (978)
Q Consensus 881 ~~~~~~~~~~~~s~~~wl~il~~~~~~ll~~~~~k~~~r~~~p~~~~~~re 931 (978)
..|+ .+..+..+|.+|+.++++++++++|+++++++++.|+|+.++++||
T Consensus 1008 ~~~~-~~~~~~~s~~f~l~~ll~~~~~l~p~~~~~~~~~~~~P~~~~~i~~ 1057 (1057)
T TIGR01652 1008 AFYK-AAPRVMGTFGFWLVLLVIVLISLLPRFTYKAIQRLFRPPDYDIVQE 1057 (1057)
T ss_pred cHHH-HHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHhhC
Confidence 4455 4446778999999999999999999999999999999999999875
No 4
>KOG0210 consensus P-type ATPase [Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.2e-127 Score=1048.96 Aligned_cols=806 Identities=31% Similarity=0.507 Sum_probs=699.9
Q ss_pred cccccceEEEEecCCCCCcceeEEEEEEC--CccccCCcCceeecCceeccCCeEEEEEEEeCccchhccccCCCCCCcC
Q 002029 5 SNFQNFKAIIRCEDPNANLYTFVGSLELE--EQQYPLTPQQLLLRDSKLRNTDCIYGAVIFTGRDTKVFQNSTGPPSKRS 82 (978)
Q Consensus 5 ~~~~~~~g~i~~e~p~~~l~~f~G~~~~~--~~~~pl~~~n~l~~Gs~l~~tg~~~gvVv~tG~~Tki~~~~~~~~~k~s 82 (978)
+++.+++ |..|+|+.++|+|.|++++. ++..|++.+|.++++|+|.+ |.++|+|+|||.||+-+||.+.++.|-.
T Consensus 240 ~el~~i~--v~Ae~P~kdIh~F~Gt~~~~d~~~~~~LsventLWanTVvAs-~t~~gvVvYTG~dtRsvMNts~pr~KvG 316 (1051)
T KOG0210|consen 240 SELMEIS--VYAEKPQKDIHSFVGTFTITDSDKPESLSVENTLWANTVVAS-GTAIGVVVYTGRDTRSVMNTSRPRSKVG 316 (1051)
T ss_pred cchheEE--EeccCcchhhHhhEEEEEEecCCCCCcccccceeeeeeeEec-CcEEEEEEEecccHHHHhccCCcccccc
Confidence 3455555 99999999999999999995 34678999999999999996 8899999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccccccccccccCCCCCCCcCCchhhHHHHHHHHHHHHHHHhcccc
Q 002029 83 KVERRMDKIIYFLFGILVLMSFIGSIFFGIATREDLQDGKMKRWYLRPDDTTAYYDPKRAAVAAVLHFLTALMLYGYLIP 162 (978)
Q Consensus 83 ~l~~~~n~~~~~~~~~~~~~~~i~~i~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~iP 162 (978)
.++..+|.+.++++++.++++++..... +.. ..||+ .+++++.|++.+||
T Consensus 317 llelEiN~ltKiL~~~vlvLs~vmv~~~----g~~------~~wyi--------------------~~~RfllLFS~IIP 366 (1051)
T KOG0210|consen 317 LLELEINGLTKILFCFVLVLSIVMVAMK----GFG------SDWYI--------------------YIIRFLLLFSSIIP 366 (1051)
T ss_pred eeeeecccHHHHHHHHHHHHHHHHHHhh----cCC------CchHH--------------------HHHHHHHHHhhhce
Confidence 9999999999999988888777654332 222 26876 78999999999999
Q ss_pred chhhhhHHHHHHHHHHHHhhccccccccCCCcccccCcccccccccceEEEeeCCcccccCeeEEEEEEECCeeeCCCch
Q 002029 163 ISLYVSIEIVKILQSIFINQDLHMYYEETDKPARARTSNLNEELGQVDTILSDKTGTLTCNSMEFIKCSIAGTSYGRGVT 242 (978)
Q Consensus 163 ~sL~v~i~~~~~~~~~~i~~d~~m~~~~~~~~~~~r~~~~~e~Lg~v~~I~sDKTGTLT~n~m~~~~~~i~~~~y~~~~~ 242 (978)
++|.+.++++|.+.++.|.+|.++ .+..+|++++.|+||+|.|+.+|||||||+|+|+|++++.+-..|+.+..
T Consensus 367 ISLRvnlDmaK~~ys~~i~~D~~I------pgtvvRSstIPEeLGRIsylLtDKTGTLTqNEM~~KKiHLGTv~~s~e~~ 440 (1051)
T KOG0210|consen 367 ISLRVNLDMAKIVYSWQIEHDKNI------PGTVVRSSTIPEELGRISYLLTDKTGTLTQNEMEFKKIHLGTVAYSAETM 440 (1051)
T ss_pred eEEEEehhHHHhhHhhhcccCCCC------CceeeecCCChHHhcceEEEEecCcCccccchheeeeeeeeeeeccHhHH
Confidence 999999999999999999998877 57899999999999999999999999999999999999999999875433
Q ss_pred H-HHHHHHhhcCCCCccchhhhhhcccccCCcccCchhhhcCCCCCCCChHHHHHHHHHHhhhcceeccccCCCCcEEEe
Q 002029 243 E-VERAMARRKGSPLEEEVTEEQEDKASIKGFNFEDERIMNGSWVNEPHADVIQKFLRLLAICHTALPEVDEENGKISYE 321 (978)
Q Consensus 243 ~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~lalC~~~~~~~~~~~~~~~y~ 321 (978)
+ ++.....-.+.. +...+.. .....++-...+++..+++|+||++.|..++ +|...||
T Consensus 441 ~eV~~~i~s~~~~~-----------~~~~~~~---------~~~~k~~~s~rv~~~V~alalCHNVTPv~e~-~ge~sYQ 499 (1051)
T KOG0210|consen 441 DEVSQHIQSLYTPG-----------RNKGKGA---------LSRVKKDMSARVRNAVLALALCHNVTPVFED-DGEVSYQ 499 (1051)
T ss_pred HHHHHHHHHhhCCC-----------ccccccc---------chhhcCcccHHHHHHHHHHHHhccCCcccCC-CceEEee
Confidence 2 222221111100 0000000 0112234556788999999999999998765 4699999
Q ss_pred cCCccHHHHHHHHHHcCCEEEeecCceeEEEecCCCCCccceeEeeEeEeecCCCCCceEEEEEEeC-CCeEEEEEeCCc
Q 002029 322 AESPDEAAFVIAARELGFEFYERTQTSISVHELDPVTGTKVERSYSLLNVLEFSSSRKRMSVIVRSE-EGTLLLLSKGAD 400 (978)
Q Consensus 322 ~~sp~E~Alv~~a~~~g~~~~~r~~~~~~i~~~~~~~~~~~~~~~~il~~~~F~s~rkrmsviv~~~-~~~~~l~~KGa~ 400 (978)
+.||||.|||++.+..|..+..|+.+.+.++.+.+. ...|+||.++||+|+.|||++|||++ .+++..|.||||
T Consensus 500 AaSPDEVAiVkwTe~VGl~L~~Rd~~~itL~~~~~~-----~~~yqIL~vFPFtsEtKRMGIIVr~e~~~evtfylKGAD 574 (1051)
T KOG0210|consen 500 AASPDEVAIVKWTETVGLKLAKRDRHAITLRVPLDD-----ELNYQILQVFPFTSETKRMGIIVRDETTEEVTFYLKGAD 574 (1051)
T ss_pred cCCCCeEEEEEeeeecceEEeecccceEEEecCCCc-----ceeEEEEEEeccccccceeeEEEecCCCceEEEEEecch
Confidence 999999999999999999999999999999887654 58999999999999999999999997 789999999999
Q ss_pred hHHHHHhcccchhhHHHHHHHHHHHHHccceeEeeEEEeCCHHHHHHHHHHHHHHhhcccccHHHHHHHHHH-HhhcccE
Q 002029 401 SVMFERLAENGREFEEQTKEHINEYADAGLRTLILAYRELDEKEYKQFNEEFTEAKNSVSADREELAEEIAE-KIEKNLI 479 (978)
Q Consensus 401 ~~i~~~~~~~~~~~~~~~~~~l~~~a~~Glr~l~~A~r~l~~~e~~~~~~~~~~a~~~l~~~r~~~~~~~~~-~ie~dl~ 479 (978)
.+|-.....+ +..++...+||.+|+|||++|+|.++++||+.|.+.|+.|+.++ .||+++..++.+ .+|+||+
T Consensus 575 ~VMs~iVq~N-----dWleEE~gNMAREGLRtLVvakK~Ls~~eye~Fe~~y~~A~lSi-~dR~~~ma~vv~~~LE~dle 648 (1051)
T KOG0210|consen 575 VVMSGIVQYN-----DWLEEECGNMAREGLRTLVVAKKVLSEEEYEAFEEAYNAAKLSI-SDRDQKMANVVERYLERDLE 648 (1051)
T ss_pred HHHhcccccc-----hhhhhhhhhhhhhcceEEEEEecccCHHHHHHHHHHHHhhhCcc-chHHHHHHHHHHHHHHhhhH
Confidence 9997766543 57788889999999999999999999999999999999999999 899999999887 8999999
Q ss_pred EEEEEeeccccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCccccCceEEEEecCCCcccccchhhhHHHHHH
Q 002029 480 LLGATAVEDKLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQGMRQVIISSETPESKTLEKSEDKSAAAA 559 (978)
Q Consensus 480 llG~i~ieD~lr~~v~~~I~~L~~aGIkv~mlTGD~~~tA~~ia~~~gl~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~ 559 (978)
++|++|+||+||++|+.+++.||+|||||||||||+.|||+.||++.+|+..++.+..+..-..... ..+.+.
T Consensus 649 lL~LTGVEDkLQ~dVk~tLElLRNAgikiWMLTGDKlETA~ciAkSs~L~sR~q~ihv~~~v~sr~d------ah~eL~- 721 (1051)
T KOG0210|consen 649 LLGLTGVEDKLQDDVKPTLELLRNAGIKIWMLTGDKLETAICIAKSSRLFSRGQYIHVIRSVTSRGD------AHNELN- 721 (1051)
T ss_pred HhcccChHHHHhhhhHhHHHHHhhcCcEEEEEcCcchhheeeeehhccceecCceEEEEEecCCchH------HHHHHH-
Confidence 9999999999999999999999999999999999999999999999999999988877766532211 011110
Q ss_pred HHHHHHHHHHHhhhhhhccccCCCCCeEEEEcCchhhhhchhhHHHHHHHHHhccCeeEEEeCCchhHHHHHHHHHccCC
Q 002029 560 ALKASVLHQLIRGKELLDSSNESLGPLALIIDGKSLTYALEDDVKDLFLELAIGCASVICCRSSPKQKALVTRLVKTKTS 639 (978)
Q Consensus 560 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~f~~l~~~~~~vi~~r~sP~qK~~iV~~lk~~~~ 639 (978)
. .......+++|+|++++..++ .+++.|.++.+.|.+|||||++|.||+++++++|++.+
T Consensus 722 ---------------~----lR~k~~~aLvi~G~Sl~~cl~-yye~Ef~el~~~~~aVv~CRctPtQKA~v~~llq~~t~ 781 (1051)
T KOG0210|consen 722 ---------------N----LRRKTDCALVIDGESLEFCLK-YYEDEFIELVCELPAVVCCRCTPTQKAQVVRLLQKKTG 781 (1051)
T ss_pred ---------------H----hhcCCCcEEEEcCchHHHHHH-HHHHHHHHHHHhcCcEEEEecChhHHHHHHHHHHHhhC
Confidence 0 124567899999999997776 77888999999999999999999999999999999999
Q ss_pred CeEEEEcCCcCCHHHhhhccccccccCCccchhccccceehhchhhhHHHHHHhhhhhhhHhhHhHHHHHHHHHHHHHHH
Q 002029 640 STTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDIAIAQFRFLERLLLVHGHWCYRRISSMICYFFYKNIAFGFTL 719 (978)
Q Consensus 640 ~~v~aiGDG~ND~~ml~~AdvGI~i~g~e~~~a~~asD~vi~~f~~l~~lll~~gR~~~~~i~~~i~~~~~~n~~~~~~~ 719 (978)
+.|++||||.||++|+|+||+||||.|+||.||..||||.|.+|+++.+||++|||.+|+|..+.-+|.+.+++....++
T Consensus 782 krvc~IGDGGNDVsMIq~A~~GiGI~gkEGkQASLAADfSItqF~Hv~rLLl~HGR~SYkrsa~laqfViHRGL~Is~~Q 861 (1051)
T KOG0210|consen 782 KRVCAIGDGGNDVSMIQAADVGIGIVGKEGKQASLAADFSITQFSHVSRLLLWHGRNSYKRSAKLAQFVIHRGLIISTMQ 861 (1051)
T ss_pred ceEEEEcCCCccchheeecccceeeecccccccchhccccHHHHHHHHHHhhccccchHHHHHHHHHHHHhhhHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhhccccccchhhHHHHHHHHHHhhhhHhhhhccccCCChHHhhhCccchhcccccccccHHHHHHHHHHHHHHHH
Q 002029 720 FFFEAYASFSGQPVYNDWFLSLYNVFFTSLPVIALGVFDQDVSARFCLKFPLLYQEGVQNILFSWTRILGWALNGVANAA 799 (978)
Q Consensus 720 ~~~~~~~~~s~~~~~~~~~~~~~n~i~~~~p~~~l~~~~~~~~~~~~~~~P~ly~~~~~~~~~~~~~~~~~~~~~~~~s~ 799 (978)
.+|.....|...++|..+.|..|..++|.+|++.+ +.|+|+.++..+.+|+||+.-.+++.++.+.|+.|++.++||+.
T Consensus 862 avfs~v~yF~~V~LyqG~LmvgysT~YTmlPVFSl-v~d~Dv~~~~a~~yPELYKeL~kgr~lSYKtF~iwvLISiYQG~ 940 (1051)
T KOG0210|consen 862 AVFSSVFYFAPVALYQGFLMVGYSTCYTMLPVFSL-VLDRDVSESLAVLYPELYKELTKGRSLSYKTFFIWVLISIYQGS 940 (1051)
T ss_pred HHHHHHhhhcchHHhhhhHHHHHHHHHHHhhhhee-eecccccHHHHhhhHHHHHHHhcCCccchhhhhhhhhHHHHccc
Confidence 99999999999999999999999999999999999 77999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhccccccCCCceehhhHHHHHHHHHHHHHHHHHHHHhhcchhhHHHHHHHHHHHHHHHHHHHHhccCcccc
Q 002029 800 IIFFFCIHAMKQQAFRKGGEVIGLEILGTTMYTCVVWVVNCQMALSVTYFTYIQHLFIWGGITFWYIFLLAYGAMDPYIS 879 (978)
Q Consensus 800 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~f~~~v~~~~~~~~~~~~~~~~~~~~~i~~si~~~~i~~~i~~~i~~~~~ 879 (978)
++.++.++.+... +..+.++.|+++++...+++++..++|+|.....-..+++++++...+...+
T Consensus 941 vim~g~~~l~~~e----------f~~ivaisFtaLi~tELiMVaLtv~tw~~~m~vae~lsL~~Yivsl~~l~~y----- 1005 (1051)
T KOG0210|consen 941 VIMYGALLLFDTE----------FIHIVAISFTALILTELIMVALTVRTWHWLMVVAELLSLALYIVSLAFLHEY----- 1005 (1051)
T ss_pred HHHHHHHHHhhhh----------heEeeeeeeHHHHHHHHHHHhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHhH-----
Confidence 9998877666532 2245678999999999999999999999998888778888777655433221
Q ss_pred chhHHHHHHHhcCChHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCHHHHHH
Q 002029 880 TTAYKVFIEACAPAPSFWLITLLVLMSSLLPYFTYSAIQMRFFPLHHQMIQ 930 (978)
Q Consensus 880 ~~~~~~~~~~~~~s~~~wl~il~~~~~~ll~~~~~k~~~r~~~p~~~~~~r 930 (978)
+-.....++.|++.+.++.+++++|.++.|+++|++.|+.|.+++
T Consensus 1006 ------fd~~f~~~~~Fl~k~t~I~~vS~Lpl~~~K~lrrk~sPpSYaKl~ 1050 (1051)
T KOG0210|consen 1006 ------FDRYFILTYVFLWKVTVITLVSCLPLYFIKALRRKLSPPSYAKLQ 1050 (1051)
T ss_pred ------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCcchhhcc
Confidence 111233567777778889999999999999999999999998875
No 5
>COG0474 MgtA Cation transport ATPase [Inorganic ion transport and metabolism]
Probab=100.00 E-value=6.7e-99 Score=930.19 Aligned_cols=668 Identities=29% Similarity=0.427 Sum_probs=537.0
Q ss_pred CcCceeecCceeccCCeEEEEEEEeCccchhccccCC---CCCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcc
Q 002029 40 TPQQLLLRDSKLRNTDCIYGAVIFTGRDTKVFQNSTG---PPSKRSKVERRMDKIIYFLFGILVLMSFIGSIFFGIATRE 116 (978)
Q Consensus 40 ~~~n~l~~Gs~l~~tg~~~gvVv~tG~~Tki~~~~~~---~~~k~s~l~~~~n~~~~~~~~~~~~~~~i~~i~~~~~~~~ 116 (978)
+..|++|+||.|++ |.+.|+|++||.+|+++++... ...+.||+++.++++...++.+.++++++.++.. .+.+.
T Consensus 215 d~~n~l~sGt~V~~-G~~~giVvaTG~~T~~G~ia~~~~~~~~~~t~l~~~l~~~~~~l~~~~l~~~~~~~~~~-~~~~~ 292 (917)
T COG0474 215 DRDNMLFSGTTVVS-GRAKGIVVATGFETEFGKIARLLPTKKEVKTPLQRKLNKLGKFLLVLALVLGALVFVVG-LFRGG 292 (917)
T ss_pred CccceEEeCCEEEc-ceEEEEEEEEcCccHHHHHHHhhccccccCCcHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHhcC
Confidence 34699999999998 9999999999999988777643 2256799999999999999999999988887665 22221
Q ss_pred ccccccccccccCCCCCCCcCCchhhHHHHHHHHHHHHHHHhccccchhhhhHHHHHHHHHHHHhhccccccccCCCccc
Q 002029 117 DLQDGKMKRWYLRPDDTTAYYDPKRAAVAAVLHFLTALMLYGYLIPISLYVSIEIVKILQSIFINQDLHMYYEETDKPAR 196 (978)
Q Consensus 117 ~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~iP~sL~v~i~~~~~~~~~~i~~d~~m~~~~~~~~~~ 196 (978)
. .| ...+++++++++++||++||+++++++++++. +| ++++++
T Consensus 293 ~-------~~--------------------~~~~~~~v~l~va~IPegLp~~vti~la~g~~------~m----ak~~~i 335 (917)
T COG0474 293 N-------GL--------------------LESFLTALALAVAAVPEGLPAVVTIALALGAQ------RM----AKDNAI 335 (917)
T ss_pred c-------cH--------------------HHHHHHHHHHHHhccccchHHHHHHHHHHHHH------HH----Hhccch
Confidence 1 12 33799999999999999999999999999999 56 889999
Q ss_pred ccCcccccccccceEEEeeCCcccccCeeEEEEEEECCeeeCCCchHHHHHHHhhcCCCCccchhhhhhcccccCCcccC
Q 002029 197 ARTSNLNEELGQVDTILSDKTGTLTCNSMEFIKCSIAGTSYGRGVTEVERAMARRKGSPLEEEVTEEQEDKASIKGFNFE 276 (978)
Q Consensus 197 ~r~~~~~e~Lg~v~~I~sDKTGTLT~n~m~~~~~~i~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 276 (978)
+|+++++|+||++++||||||||||+|+|+|++|++++. +.+..
T Consensus 336 vr~l~avE~LG~v~vICsDKTGTLTqN~M~v~~~~~~~~--~~~~~---------------------------------- 379 (917)
T COG0474 336 VRSLNAIETLGSVDVICSDKTGTLTQNKMTVKKIYINGG--GKDID---------------------------------- 379 (917)
T ss_pred hhccchhhhccCccEEEecCCCCCccCeEEEEEEEeCCC--ccccc----------------------------------
Confidence 999999999999999999999999999999999998851 00000
Q ss_pred chhhhcCCCCCCCChHHHHHHHHHHhhhcceeccccCCCCcEEEecCCccHHHHHHHHHHcCCEEEeecCceeEEEecCC
Q 002029 277 DERIMNGSWVNEPHADVIQKFLRLLAICHTALPEVDEENGKISYEAESPDEAAFVIAARELGFEFYERTQTSISVHELDP 356 (978)
Q Consensus 277 ~~~l~~~~~~~~~~~~~~~~~~~~lalC~~~~~~~~~~~~~~~y~~~sp~E~Alv~~a~~~g~~~~~r~~~~~~i~~~~~ 356 (978)
+ ......+...+++.++++||++.+..+ + .|..+||+|.||++++.+.|+.+ .+ .
T Consensus 380 ~--------~~~~~~~~~~~~l~~~~lc~~~~~~~~-~----~~~~gdptE~Al~~~a~~~~~~~-~~--~--------- 434 (917)
T COG0474 380 D--------KDLKDSPALLRFLLAAALCNSVTPEKN-G----WYQAGDPTEGALVEFAEKLGFSL-DL--S--------- 434 (917)
T ss_pred c--------cccccchHHHHHHHHHHhcCccccccc-C----ceecCCccHHHHHHHHHhcCCcC-CH--H---------
Confidence 0 000123344589999999999988755 3 66789999999999999999844 11 0
Q ss_pred CCCccceeEeeEeEeecCCCCCceEEEEEEeCCCeEEEEEeCCchHHHHHhcc------cchhhHHHHHHHHHHHHHccc
Q 002029 357 VTGTKVERSYSLLNVLEFSSSRKRMSVIVRSEEGTLLLLSKGADSVMFERLAE------NGREFEEQTKEHINEYADAGL 430 (978)
Q Consensus 357 ~~~~~~~~~~~il~~~~F~s~rkrmsviv~~~~~~~~l~~KGa~~~i~~~~~~------~~~~~~~~~~~~l~~~a~~Gl 430 (978)
.....|++++++||||+|||||||++..+++++++|||||++|+++|+. ..++.++.+.+..++|+.+||
T Consensus 435 ----~~~~~~~~~~~~PFdS~rKrMsviv~~~~~~~~~~~KGApe~il~~~~~~~~~~~~~~~~~~~~~~~~~~la~~gl 510 (917)
T COG0474 435 ----GLEVEYPILAEIPFDSERKRMSVIVKTDEGKYILFVKGAPEVILERCKSIGELEPLTEEGLRTLEEAVKELASEGL 510 (917)
T ss_pred ----HHhhhcceeEEecCCCCceEEEEEEEcCCCcEEEEEcCChHHHHHHhcccCcccccCHHHHHHHHHHHHHHHHHHH
Confidence 1236678999999999999999999977788999999999999999985 245677889999999999999
Q ss_pred eeEeeEEEeCCHHHHHHHHHHHHHHhhcccccHHHHHHHHHHHhhcccEEEEEEeeccccCCChHHHHHHHHHcCCeEEE
Q 002029 431 RTLILAYRELDEKEYKQFNEEFTEAKNSVSADREELAEEIAEKIEKNLILLGATAVEDKLQNGVPECIDKLAQAGIKLWV 510 (978)
Q Consensus 431 r~l~~A~r~l~~~e~~~~~~~~~~a~~~l~~~r~~~~~~~~~~ie~dl~llG~i~ieD~lr~~v~~~I~~L~~aGIkv~m 510 (978)
|||++|||.+++++.. . .. +.+|+||+|+|+++++||||++|+++|+.|++|||++||
T Consensus 511 Rvla~A~k~~~~~~~~----------------~-----~~-~~~E~dl~~lGl~g~~Dppr~~v~~aI~~l~~AGI~v~M 568 (917)
T COG0474 511 RVLAVAYKKLDRAEKD----------------D-----EV-DEIESDLVFLGLTGIEDPPREDVKEAIEELREAGIKVWM 568 (917)
T ss_pred HHHHHHhccCCccccc----------------c-----hh-hhhhccceeehhhhccCCCCccHHHHHHHHHHCCCcEEE
Confidence 9999999977654311 1 11 678999999999999999999999999999999999999
Q ss_pred EcCCChhhHHHHHHHcCccccCceEEEEecCCCcccccchhhhHHHHHHHHHHHHHHHHHhhhhhhccccCCCCCeEEEE
Q 002029 511 LTGDKMETAINIGFACSLLRQGMRQVIISSETPESKTLEKSEDKSAAAAALKASVLHQLIRGKELLDSSNESLGPLALII 590 (978)
Q Consensus 511 lTGD~~~tA~~ia~~~gl~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi 590 (978)
+|||+.+||++||++||+..+.. . .+++
T Consensus 569 iTGD~~~TA~aIa~~~Gi~~~~~---------------------------------------------------~-~~vi 596 (917)
T COG0474 569 ITGDHVETAIAIAKECGIEAEAE---------------------------------------------------S-ALVI 596 (917)
T ss_pred ECCCCHHHHHHHHHHcCCCCCCC---------------------------------------------------c-eeEe
Confidence 99999999999999999754321 0 5699
Q ss_pred cCchhhhhchhhHHHHHHHHHhccCeeEEEeCCchhHHHHHHHHHccCCCeEEEEcCCcCCHHHhhhccccccccCCccc
Q 002029 591 DGKSLTYALEDDVKDLFLELAIGCASVICCRSSPKQKALVTRLVKTKTSSTTLAIGDGANDVGMLQEADIGVGISGVEGM 670 (978)
Q Consensus 591 ~G~~l~~~~~~~~~~~f~~l~~~~~~vi~~r~sP~qK~~iV~~lk~~~~~~v~aiGDG~ND~~ml~~AdvGI~i~g~e~~ 670 (978)
+|.+++.+.++++.+.+. .++ ||||+||+||.++|+.+|+ .|++|+|+|||+||+||||+|||||||.++...
T Consensus 597 ~G~el~~l~~~el~~~~~----~~~--VfARvsP~qK~~IV~~lq~-~g~vVamtGDGvNDapALk~ADVGIamg~~Gtd 669 (917)
T COG0474 597 DGAELDALSDEELAELVE----ELS--VFARVSPEQKARIVEALQK-SGHVVAMTGDGVNDAPALKAADVGIAMGGEGTD 669 (917)
T ss_pred ehHHhhhcCHHHHHHHhh----hCc--EEEEcCHHHHHHHHHHHHh-CCCEEEEeCCCchhHHHHHhcCccEEecccHHH
Confidence 999999888875555554 334 9999999999999999999 799999999999999999999999999653333
Q ss_pred hhccccceehhchhh--hHHHHHHhhhhhhhHhhHhHHHHHHHHHHHHHHHHHHHHhhccccccchhhHHHHHHHHHHhh
Q 002029 671 QAVMSSDIAIAQFRF--LERLLLVHGHWCYRRISSMICYFFYKNIAFGFTLFFFEAYASFSGQPVYNDWFLSLYNVFFTS 748 (978)
Q Consensus 671 ~a~~asD~vi~~f~~--l~~lll~~gR~~~~~i~~~i~~~~~~n~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~n~i~~~ 748 (978)
.|+++||+++.+.++ +..+ +.|||++|.|+++++.|.+++|+..+++++++.+++.+ ..|++++|++|+|+++++
T Consensus 670 aak~Aadivl~dd~~~~i~~a-v~eGR~~~~ni~k~i~~~l~~n~~~~~~~~~~~~~~~~--~~p~~~~qll~inll~d~ 746 (917)
T COG0474 670 AAKEAADIVLLDDNFATIVLA-VVEGRRVYVNIKKFILYLLSKNVGEVLTLLIYSLFNLF--FLPLTPLQLLWINLLTDS 746 (917)
T ss_pred HHHhhcceEeecCcHHHHHHH-HHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc--cccHHHHHHHHHHHHHhh
Confidence 378899999998555 5555 99999999999999999999999999999999988765 567999999999999999
Q ss_pred hhHhhhhccccCCChHHhhhCccchhcccccccccHHHHHHHHHHHHHHHHHHHHHHHHhhccccc-cCCCceehhhHHH
Q 002029 749 LPVIALGVFDQDVSARFCLKFPLLYQEGVQNILFSWTRILGWALNGVANAAIIFFFCIHAMKQQAF-RKGGEVIGLEILG 827 (978)
Q Consensus 749 ~p~~~l~~~~~~~~~~~~~~~P~ly~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~-~~~g~~~~~~~~~ 827 (978)
+|++++|+++ ++...+++|+ ++++..+|+.+.++.|++...+++++++++.+..+..... ...+.........
T Consensus 747 ~pa~~L~~~~---~~~~~m~~~~---~~p~~~i~~~~~~~~~i~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 820 (917)
T COG0474 747 LPALALGVED---PESDVMKRPP---RGPEEGLFNRKIFWRFILIIGLLSAILFILTFLLYLLGFIANTLGLDLFQALLQ 820 (917)
T ss_pred hhhheeecCC---CcccccccCC---CCccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccchhhHHHHHH
Confidence 9999999975 3444555552 3788899999999999988888888888777765543221 1122111244667
Q ss_pred HHHHHHHHHHHHHHHHHhhcc----hh--hHHHHHHHHHHHHHHHHHHHHhccCccccchhHHHHHHHhcCChHHHHHHH
Q 002029 828 TTMYTCVVWVVNCQMALSVTY----FT--YIQHLFIWGGITFWYIFLLAYGAMDPYISTTAYKVFIEACAPAPSFWLITL 901 (978)
Q Consensus 828 ~~~f~~~v~~~~~~~~~~~~~----~~--~~~~~~i~~si~~~~i~~~i~~~i~~~~~~~~~~~~~~~~~~s~~~wl~il 901 (978)
+++|+.+++.+.+..+..... +. ++.+..+|+++++..++.++..++|..... .|...+.+...|+.++
T Consensus 821 t~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~l~l~~~~~~~~~~~-----~f~~~~~~~~~~~~~~ 895 (917)
T COG0474 821 TTAFTVLVLIQLLLTLAVRSRGRPFLSSLLFSNKYLWLALLVIIILQLLIIFLPPLNLK-----IFQPTPLSLFEWLIAI 895 (917)
T ss_pred HHHHHHHHHHHHHHHHHHhccccchhhcccccCHHHHHHHHHHHHHHHHHHHhHHhHhh-----hccCCCCcHHHHHHHH
Confidence 888888888877776543222 11 236778888888888888888877753211 4456666677787766
Q ss_pred HHHHH
Q 002029 902 LVLMS 906 (978)
Q Consensus 902 ~~~~~ 906 (978)
++...
T Consensus 896 ~~~~~ 900 (917)
T COG0474 896 AVALL 900 (917)
T ss_pred HHHHH
Confidence 65533
No 6
>KOG0202 consensus Ca2+ transporting ATPase [Inorganic ion transport and metabolism]
Probab=100.00 E-value=4.3e-98 Score=841.25 Aligned_cols=733 Identities=21% Similarity=0.271 Sum_probs=567.2
Q ss_pred CcCceeecCceeccCCeEEEEEEEeCccchhc---cccCCCCCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHhhhc
Q 002029 40 TPQQLLLRDSKLRNTDCIYGAVIFTGRDTKVF---QNSTGPPSKRSKVERRMDKIIYFLFGILVLMSFIGSIF-FGIATR 115 (978)
Q Consensus 40 ~~~n~l~~Gs~l~~tg~~~gvVv~tG~~Tki~---~~~~~~~~k~s~l~~~~n~~~~~~~~~~~~~~~i~~i~-~~~~~~ 115 (978)
++.|++|.||.|++ |.+.|+|+.||.+|+++ ..+...+..+||||++++.+...+..++.++|+.++++ .+++.
T Consensus 190 dk~NiaFsGT~V~~-G~a~GIVi~TG~nTeiG~I~~~m~~~e~~kTPLqk~ld~~G~qLs~~is~i~v~v~~~nig~f~- 267 (972)
T KOG0202|consen 190 DKKNIAFSGTLVVA-GRAKGIVIGTGLNTEIGKIFKMMQATESPKTPLQKKLDEFGKQLSKVISFICVGVWLLNIGHFL- 267 (972)
T ss_pred cceeeEeecceeec-CceeEEEEeccccchHHHHHHHHhccCCCCCcHHHHHHHHHHHHHHHheehhhhHHHhhhhhhc-
Confidence 56899999999998 99999999999999663 23344567789999999999999997777777766655 22222
Q ss_pred cccccccccccccCCCCCCCcCCchhhHHHHHHHHHHHHHHHhccccchhhhhHHHHHHHHHHHHhhccccccccCCCcc
Q 002029 116 EDLQDGKMKRWYLRPDDTTAYYDPKRAAVAAVLHFLTALMLYGYLIPISLYVSIEIVKILQSIFINQDLHMYYEETDKPA 195 (978)
Q Consensus 116 ~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~iP~sL~v~i~~~~~~~~~~i~~d~~m~~~~~~~~~ 195 (978)
..... .+|+ ......|..+++|.+++||+|||+.+++..+++.+ +| +++++
T Consensus 268 ~p~~~---g~~f----------------k~~~~~f~IaVsLAVAAIPEGLPaVvT~tLALG~~------rM----akkna 318 (972)
T KOG0202|consen 268 DPVHG---GSWF----------------KGALYYFKIAVSLAVAAIPEGLPAVVTTTLALGTR------RM----AKKNA 318 (972)
T ss_pred ccccc---ccch----------------hchhhhhhHHHHHHHHhccCCCcchhhhhHHHhHH------HH----Hhhhh
Confidence 11100 1333 23355788899999999999999999999999999 78 99999
Q ss_pred cccCcccccccccceEEEeeCCcccccCeeEEEEEEECCeeeCCCchHHHHHHHhhcCCCCccchhhhhhcccccCCccc
Q 002029 196 RARTSNLNEELGQVDTILSDKTGTLTCNSMEFIKCSIAGTSYGRGVTEVERAMARRKGSPLEEEVTEEQEDKASIKGFNF 275 (978)
Q Consensus 196 ~~r~~~~~e~Lg~v~~I~sDKTGTLT~n~m~~~~~~i~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 275 (978)
+||+++.+|+||.+++||||||||||+|+|.+.++++.+..+... .+. . ..+...+ ..+-.+
T Consensus 319 IVRkLPsVETLGc~~VICSDKTGTLTtN~Mtv~~i~~~~~~~~~~-~~f--~---~tg~ty~------------~~g~v~ 380 (972)
T KOG0202|consen 319 IVRKLPSVETLGCVNVICSDKTGTLTTNQMTVSKIFIPDGGTATV-DEF--N---PTGTTYS------------PEGEVF 380 (972)
T ss_pred hhhcccchhhccceeEEecCCCCcccccceEEEEEEecccccccc-ccc--c---cCCceeC------------CCCceE
Confidence 999999999999999999999999999999999999877654432 000 0 0000000 000001
Q ss_pred CchhhhcCCCCCCCChHHHHHHHHHHhhhcceeccccCCCCcEEEecCCccHHHHHHHHHHcCCEEEeecCceeEEEecC
Q 002029 276 EDERIMNGSWVNEPHADVIQKFLRLLAICHTALPEVDEENGKISYEAESPDEAAFVIAARELGFEFYERTQTSISVHELD 355 (978)
Q Consensus 276 ~~~~l~~~~~~~~~~~~~~~~~~~~lalC~~~~~~~~~~~~~~~y~~~sp~E~Alv~~a~~~g~~~~~r~~~~~~i~~~~ 355 (978)
.+.. . ........+.+++++.+.++||.+..++++. +.++- -|.|.|.||...|.+.|+.-......+ . .+ +
T Consensus 381 ~~~~-~--~~~~~~~~~~l~~l~~i~~lCNda~v~~~~~-~~~~~-~G~pTE~AL~vlaeKm~l~~~~~~~~s-~-~~-~ 452 (972)
T KOG0202|consen 381 KDGL-Y--EKDKAGDNDLLQELAEICALCNDATVEYNDA-DCYEK-VGEPTEGALIVLAEKMGLPGTRSTNLS-N-EE-A 452 (972)
T ss_pred ecCc-c--ccccccccHHHHHHHHHHHhhhhhhhhcCch-hhHHh-cCCchHHHHHHHHHHcCCCcchhhccc-c-cc-c
Confidence 0000 0 0001234567889999999999998876653 22222 378999999999999998643311100 0 00 1
Q ss_pred CCCCccceeEeeEeEeecCCCCCceEEEEEEeCCCe--EEEEEeCCchHHHHHhccc-----------chhhHHHHHHHH
Q 002029 356 PVTGTKVERSYSLLNVLEFSSSRKRMSVIVRSEEGT--LLLLSKGADSVMFERLAEN-----------GREFEEQTKEHI 422 (978)
Q Consensus 356 ~~~~~~~~~~~~il~~~~F~s~rkrmsviv~~~~~~--~~l~~KGa~~~i~~~~~~~-----------~~~~~~~~~~~l 422 (978)
..+.+.-.+.++...++||+|+||+|||.+.++.+. +.+|+|||+|.|+++|+.. .+..++.+.+..
T Consensus 453 ~~c~~~~~~~~~~~~elpFssdrK~Msv~c~~~~~~~~~~~fvKGA~E~Vl~rcs~~~~~~g~~~~pLt~~~re~il~~~ 532 (972)
T KOG0202|consen 453 SACNRVYSRLFKKIAELPFSSDRKSMSVKCSPAHGQSGYKMFVKGAPESVLERCSTYYGSDGQTKVPLTQASRETILANV 532 (972)
T ss_pred ccchhHHHHhhhheeEeecccccceEEEEEecCCCCccceEEecCChHHHHHhhhcEEccCCceeeeCcHHHHHHHHHHH
Confidence 122222335567779999999999999999987664 8999999999999999542 345788999999
Q ss_pred HHHHHccceeEeeEEEeCCHHHHHHHHHHHHHHhhcccccHHHHHHH--HHHHhhcccEEEEEEeeccccCCChHHHHHH
Q 002029 423 NEYADAGLRTLILAYRELDEKEYKQFNEEFTEAKNSVSADREELAEE--IAEKIEKNLILLGATAVEDKLQNGVPECIDK 500 (978)
Q Consensus 423 ~~~a~~Glr~l~~A~r~l~~~e~~~~~~~~~~a~~~l~~~r~~~~~~--~~~~ie~dl~llG~i~ieD~lr~~v~~~I~~ 500 (978)
.+|+.+|||+|++|+++.+.. ...+..+.+ -+...|+||+|+|++|+.||+|++|+++|+.
T Consensus 533 ~~~g~~gLRvLalA~~~~~~~-----------------~~~~~~l~~~s~~~~~E~~LtFvGlVGi~DPPR~ev~~ai~~ 595 (972)
T KOG0202|consen 533 YEMGSEGLRVLALASKDSPGQ-----------------VPDDQDLNDTSNRATAESDLTFVGLVGILDPPRPEVADAIEL 595 (972)
T ss_pred HHHhhccceEEEEEccCCccc-----------------ChhhhhhcccccccccccceEEEEEeeccCCCchhHHHHHHH
Confidence 999999999999999977631 011111111 2357899999999999999999999999999
Q ss_pred HHHcCCeEEEEcCCChhhHHHHHHHcCccccCceEEEEecCCCcccccchhhhHHHHHHHHHHHHHHHHHhhhhhhcccc
Q 002029 501 LAQAGIKLWVLTGDKMETAINIGFACSLLRQGMRQVIISSETPESKTLEKSEDKSAAAAALKASVLHQLIRGKELLDSSN 580 (978)
Q Consensus 501 L~~aGIkv~mlTGD~~~tA~~ia~~~gl~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 580 (978)
|++|||+|.|+|||+.+||.+||+++|+...+.+
T Consensus 596 c~~aGIrV~mITGD~~~TA~AI~r~iGi~~~~ed---------------------------------------------- 629 (972)
T KOG0202|consen 596 CRQAGIRVIMITGDNKETAEAIAREIGIFSEDED---------------------------------------------- 629 (972)
T ss_pred HHHcCCEEEEEcCCCHHHHHHHHHHhCCCcCCcc----------------------------------------------
Confidence 9999999999999999999999999998765421
Q ss_pred CCCCCeEEEEcCchhhhhchhhHHHHHHHHHhccCeeEEEeCCchhHHHHHHHHHccCCCeEEEEcCCcCCHHHhhhccc
Q 002029 581 ESLGPLALIIDGKSLTYALEDDVKDLFLELAIGCASVICCRSSPKQKALVTRLVKTKTSSTTLAIGDGANDVGMLQEADI 660 (978)
Q Consensus 581 ~~~~~~~lvi~G~~l~~~~~~~~~~~f~~l~~~~~~vi~~r~sP~qK~~iV~~lk~~~~~~v~aiGDG~ND~~ml~~Adv 660 (978)
-....++|++++.+.++++.+... +..+|+|++|++|.+||+.||+ .|++|+|+|||+||+|+||.|||
T Consensus 630 ----~~~~~~TG~efD~ls~~~~~~~~~------~~~vFaR~~P~HK~kIVeaLq~-~geivAMTGDGVNDApALK~AdI 698 (972)
T KOG0202|consen 630 ----VSSMALTGSEFDDLSDEELDDAVR------RVLVFARAEPQHKLKIVEALQS-RGEVVAMTGDGVNDAPALKKADI 698 (972)
T ss_pred ----ccccccchhhhhcCCHHHHHHHhh------cceEEEecCchhHHHHHHHHHh-cCCEEEecCCCccchhhhhhccc
Confidence 012377888888777666654443 4559999999999999999998 99999999999999999999999
Q ss_pred cccc--cCCccchhccccceehhchhh--hHHHHHHhhhhhhhHhhHhHHHHHHHHHHHHHHHHHHHHhhccccccchhh
Q 002029 661 GVGI--SGVEGMQAVMSSDIAIAQFRF--LERLLLVHGHWCYRRISSMICYFFYKNIAFGFTLFFFEAYASFSGQPVYND 736 (978)
Q Consensus 661 GI~i--~g~e~~~a~~asD~vi~~f~~--l~~lll~~gR~~~~~i~~~i~~~~~~n~~~~~~~~~~~~~~~~s~~~~~~~ 736 (978)
||+| +|++. ||+|||+|+.|++| +..+ +.+||.+|.|+++++.|.++.|+..+..+|+...+. -..++++
T Consensus 699 GIAMG~~GTdV--aKeAsDMVL~DDnFstIvaA-VEEGr~IynNik~Fir~~lSsnVgev~~I~l~aa~~---~p~pL~p 772 (972)
T KOG0202|consen 699 GIAMGISGTDV--AKEASDMVLADDNFSTIVAA-VEEGRAIYNNIKNFIRYLLSSNVGEVVLIFLTAAFG---IPEPLIP 772 (972)
T ss_pred ceeecCCccHh--hHhhhhcEEecCcHHHHHHH-HHHhHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHhC---CCCcccc
Confidence 9977 46666 99999999999555 7778 899999999999999999999999999988887774 3346999
Q ss_pred HHHHHHHHHHhhhhHhhhhccccCCChHHhhhCccchhcccccccccHHHHHHHHHHHHHHHHHHHHHHHHhhccc--cc
Q 002029 737 WFLSLYNVFFTSLPVIALGVFDQDVSARFCLKFPLLYQEGVQNILFSWTRILGWALNGVANAAIIFFFCIHAMKQQ--AF 814 (978)
Q Consensus 737 ~~~~~~n~i~~~~p~~~l~~~~~~~~~~~~~~~P~ly~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~--~~ 814 (978)
+|++|+|++++.+|+.++|+++ ++++.+.+.|+ ..+..+++++.++.++..|+|.++++.+.+.+.+... ..
T Consensus 773 vQiLWiNlvtDG~PA~aLG~ep--~D~DiM~kpPR----~~~~~iit~~l~~r~l~~g~~vg~~Tv~~f~~~~~~~~~~v 846 (972)
T KOG0202|consen 773 VQILWINLVTDGPPATALGFEP--VDPDIMKKPPR----DSKDGIITGWLIFRYLAIGIIVGVATVGVFVWWMYGADGKV 846 (972)
T ss_pred hhhheeeeeccCCchhhcCCCC--CChhHHhCCCC----CCCCCeeeHHHHHHHHHhheeeeeeEhHhhhHHHhcCCCCc
Confidence 9999999999999999999975 56677777776 7888999999999999999999998887776655521 11
Q ss_pred cCC----------------CceehhhHHHHHHHHHHHHHHHHHHHHhhcchh-------hHHHHHHHHHHHHHHHHHHHH
Q 002029 815 RKG----------------GEVIGLEILGTTMYTCVVWVVNCQMALSVTYFT-------YIQHLFIWGGITFWYIFLLAY 871 (978)
Q Consensus 815 ~~~----------------g~~~~~~~~~~~~f~~~v~~~~~~~~~~~~~~~-------~~~~~~i~~si~~~~i~~~i~ 871 (978)
+.+ ..........|+.|+++++.-.+.. +..++++ .+.|.++.+++++.++.++..
T Consensus 847 t~~~~~~~~~c~~~~~~~~c~~F~~~~~~tMa~tv~V~~emfNa-L~~~se~~slf~~~~~~N~~l~~ai~~S~~~~f~i 925 (972)
T KOG0202|consen 847 TYRQLAHYNSCCRDFYGSRCAVFEDMCPLTMALTVLVFIEMFNA-LNCLSENKSLFTMPPWSNRWLLWAIALSFVLHFLV 925 (972)
T ss_pred ChhhhcchhhhcccccccchhhhcccccceEEEeehhHHHHHHH-hhcccCCcceEEecccccHHHHHHHHHHHHhhheE
Confidence 000 0000000122777888877665554 4455544 567888999999999999999
Q ss_pred hccCccccchhHHHHHHHhcCChHHHHHHHHHHHHHHHHHHHHHHHHHhhC
Q 002029 872 GAMDPYISTTAYKVFIEACAPAPSFWLITLLVLMSSLLPYFTYSAIQMRFF 922 (978)
Q Consensus 872 ~~i~~~~~~~~~~~~~~~~~~s~~~wl~il~~~~~~ll~~~~~k~~~r~~~ 922 (978)
.|+|+ ++. +|+..++++..|+.++.+....++.++++|++.|.+.
T Consensus 926 lYvp~-l~~-----iFq~~~l~~~ew~~vl~~s~~V~i~dEilK~~~R~~~ 970 (972)
T KOG0202|consen 926 LYVPP-LQR-----IFQTEPLSLAEWLLVLAISSPVIIVDEILKFIARNYF 970 (972)
T ss_pred EEech-hhh-----hheecCCcHHHHHHHHHHhhhhhhHHHHHHHHHHhcc
Confidence 99996 455 6778899999999999999999999999999999764
No 7
>KOG0204 consensus Calcium transporting ATPase [Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.2e-94 Score=811.65 Aligned_cols=717 Identities=21% Similarity=0.284 Sum_probs=566.8
Q ss_pred ecCCCCCcceeEE-EEEEC-----CccccC----CcCceeecCceeccCCeEEEEEEEeCccchh---ccccCCCCCCcC
Q 002029 16 CEDPNANLYTFVG-SLELE-----EQQYPL----TPQQLLLRDSKLRNTDCIYGAVIFTGRDTKV---FQNSTGPPSKRS 82 (978)
Q Consensus 16 ~e~p~~~l~~f~G-~~~~~-----~~~~pl----~~~n~l~~Gs~l~~tg~~~gvVv~tG~~Tki---~~~~~~~~~k~s 82 (978)
|.-|.+.+. ++| .+++| ||+.++ +.+.+|++||++.+ |.+.++|+.+|.+|+. |.........+|
T Consensus 250 DqvPADGvl-i~gn~L~iDESSlTGESd~v~k~~~~dPfLlSGTkv~e-GsgkMlVTaVGmnt~wG~~m~~l~~~~~e~t 327 (1034)
T KOG0204|consen 250 DQVPADGVL-IQGNSLKIDESSLTGESDHVQKSLDKDPFLLSGTKVME-GSGKMLVTAVGMNTQWGIIMTLLGAGGEEET 327 (1034)
T ss_pred CccccceEE-EeccceeEecccccCCCcceeccCCCCCeEeecceeec-CcceEEEEEeeecchHhhHHHhhhcCCCcCC
Confidence 445555544 355 46665 666655 57889999999998 9999999999999965 444556666889
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh--hccccccccccccccCCCCCCCcCCchhhHHHHHHHHHHHHHHHhcc
Q 002029 83 KVERRMDKIIYFLFGILVLMSFIGSIFFGIA--TREDLQDGKMKRWYLRPDDTTAYYDPKRAAVAAVLHFLTALMLYGYL 160 (978)
Q Consensus 83 ~l~~~~n~~~~~~~~~~~~~~~i~~i~~~~~--~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~ 160 (978)
|+|-++++++..+..+.++++++..++.... .+....++.. .| ..+......++..|..++.+++.+
T Consensus 328 pLQ~kL~~lA~~Igk~Gl~~A~~~~~VL~~r~~~~~~~~~~~~-~~----------~~~~~~~~~~v~~f~i~VTilVVA 396 (1034)
T KOG0204|consen 328 PLQVKLNGLATQIGKIGLLFAALTFIVLVIRFFIGKTKIEGGT-GT----------TWSDEYIQEFVKFFIIAVTILVVA 396 (1034)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhheeeecCCCC-Cc----------cccHHHHHHHHHHhhheeEEEEEE
Confidence 9999999999999888888877766554432 2211111000 01 112233456677888889999999
Q ss_pred ccchhhhhHHHHHHHHHHHHhhccccccccCCCcccccCcccccccccceEEEeeCCcccccCeeEEEEEEECCeeeCCC
Q 002029 161 IPISLYVSIEIVKILQSIFINQDLHMYYEETDKPARARTSNLNEELGQVDTILSDKTGTLTCNSMEFIKCSIAGTSYGRG 240 (978)
Q Consensus 161 iP~sL~v~i~~~~~~~~~~i~~d~~m~~~~~~~~~~~r~~~~~e~Lg~v~~I~sDKTGTLT~n~m~~~~~~i~~~~y~~~ 240 (978)
+|++||+++++..++... +| .+.+.++|.++++|++|..+.||+|||||||.|+|++.+.++++..|..+
T Consensus 397 VPEGLPLAVTLsLAys~k------kM----mkD~~LVRhL~ACETMGsAT~ICsDKTGTLT~N~MtVV~~~~~~~~~k~~ 466 (1034)
T KOG0204|consen 397 VPEGLPLAVTLSLAYSMK------KM----MKDNNLVRHLDACETMGSATAICSDKTGTLTTNRMTVVQSYIGSEHYKVN 466 (1034)
T ss_pred CCCCccHHHHHHHHHHHH------HH----hcchhHHHHhHHHhhcCCceEEEecCcCceEeeeEEEEeeeecccccccc
Confidence 999999999999888887 56 66778899999999999999999999999999999999999988877532
Q ss_pred chHHHHHHHhhcCCCCccchhhhhhcccccCCcccCchhhhcCCCCCCCChHHHHHHHHHHhhhcceeccccCCCCcEEE
Q 002029 241 VTEVERAMARRKGSPLEEEVTEEQEDKASIKGFNFEDERIMNGSWVNEPHADVIQKFLRLLAICHTALPEVDEENGKISY 320 (978)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~lalC~~~~~~~~~~~~~~~y 320 (978)
... . ..-.+.....++.+++...+.....++..+...-
T Consensus 467 ~~~-~-----------------------------------------~~l~~~~~~ll~~gI~~Nt~g~v~~~~~~g~~~~ 504 (1034)
T KOG0204|consen 467 SPK-S-----------------------------------------SNLPPSLLDLLLQGIAQNTTGSVVKPEKGGEQPE 504 (1034)
T ss_pred Ccc-c-----------------------------------------ccCCHHHHHHHHHHHhhcCCCeEEecCCCCcCcc
Confidence 210 0 0012234445666777666555544444443444
Q ss_pred ecCCccHHHHHHHHHHcCCEEEeecCceeEEEecCCCCCccceeEeeEeEeecCCCCCceEEEEEEeCCCeEEEEEeCCc
Q 002029 321 EAESPDEAAFVIAARELGFEFYERTQTSISVHELDPVTGTKVERSYSLLNVLEFSSSRKRMSVIVRSEEGTLLLLSKGAD 400 (978)
Q Consensus 321 ~~~sp~E~Alv~~a~~~g~~~~~r~~~~~~i~~~~~~~~~~~~~~~~il~~~~F~s~rkrmsviv~~~~~~~~l~~KGa~ 400 (978)
+.+||.|.||+.++.++|..+.. .+...++++++||+|+||||+++++.+++..++|+|||.
T Consensus 505 ~~GspTE~AlL~f~~~LG~~~~~------------------~R~e~~v~kv~~FNS~kK~~gvvi~~~~~~~y~~~KGAs 566 (1034)
T KOG0204|consen 505 QLGSPTECALLGFGLKLGMDFQD------------------VRPEEKVVKVYPFNSVKKRMGVVIKLPDGGHYVHWKGAS 566 (1034)
T ss_pred ccCCHHHHHHHHHHHHhCcchHh------------------hcchhheeEEeccCcccceeeEEEEcCCCCeEEEEcChH
Confidence 56899999999999999987754 246678899999999999999999988776239999999
Q ss_pred hHHHHHhccc----------chhhHHHHHHHHHHHHHccceeEeeEEEeCCHH--HHHHHHHHHHHHhhcccccHHHHHH
Q 002029 401 SVMFERLAEN----------GREFEEQTKEHINEYADAGLRTLILAYRELDEK--EYKQFNEEFTEAKNSVSADREELAE 468 (978)
Q Consensus 401 ~~i~~~~~~~----------~~~~~~~~~~~l~~~a~~Glr~l~~A~r~l~~~--e~~~~~~~~~~a~~~l~~~r~~~~~ 468 (978)
|.|+.+|+.. +++.+..+++.++.||++||||+|+|||++... +-.+|..
T Consensus 567 EiVL~~C~~~~~~~g~~~~~~e~~~~~~~~~Ie~mA~~~LRti~lAy~df~~~~~~~~~~~~------------------ 628 (1034)
T KOG0204|consen 567 EIVLKSCEYYIDSNGELVPFNEDDRKSFKDVIEPMASEGLRTICLAYRDFVAGPDEEPSWDN------------------ 628 (1034)
T ss_pred HHHHHhhhheECCCCCEeeCCHHHHHHHHHHHHHHHHhhhheeeEEeeccccCCCCCCCccc------------------
Confidence 9999999864 345566889999999999999999999995443 1112211
Q ss_pred HHHHHhhcccEEEEEEeeccccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCccccCceEEEEecCCCccccc
Q 002029 469 EIAEKIEKNLILLGATAVEDKLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQGMRQVIISSETPESKTL 548 (978)
Q Consensus 469 ~~~~~ie~dl~llG~i~ieD~lr~~v~~~I~~L~~aGIkv~mlTGD~~~tA~~ia~~~gl~~~~~~~i~i~~~~~~~~~~ 548 (978)
.+..+.+|+++|++||+||.||||+++|+.|+.|||+|.|+|||+..||.+||.+|||++++..
T Consensus 629 --~~~~~~~lt~laivGIkDPvRPgV~~AV~~Cq~AGItVRMVTGDNI~TAkAIA~eCGILt~~~d-------------- 692 (1034)
T KOG0204|consen 629 --EELPEGGLTLLAIVGIKDPVRPGVPEAVQLCQRAGITVRMVTGDNINTAKAIARECGILTPGGD-------------- 692 (1034)
T ss_pred --cccCCCCeEEEEEeeccCCCCCCcHHHHHHHHHcCcEEEEEeCCcHHHHHHHHHHcccccCCCc--------------
Confidence 1345789999999999999999999999999999999999999999999999999999987643
Q ss_pred chhhhHHHHHHHHHHHHHHHHHhhhhhhccccCCCCCeEEEEcCchhhhhchhhHHHHHHHHHhccCeeEEEeCCchhHH
Q 002029 549 EKSEDKSAAAAALKASVLHQLIRGKELLDSSNESLGPLALIIDGKSLTYALEDDVKDLFLELAIGCASVICCRSSPKQKA 628 (978)
Q Consensus 549 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~f~~l~~~~~~vi~~r~sP~qK~ 628 (978)
.+.++|++++++.++++.+...++. |.+|.+|.+|.
T Consensus 693 --------------------------------------~~~lEG~eFr~~s~ee~~~i~pkl~------VlARSSP~DK~ 728 (1034)
T KOG0204|consen 693 --------------------------------------FLALEGKEFRELSQEERDKIWPKLR------VLARSSPNDKH 728 (1034)
T ss_pred --------------------------------------cceecchhhhhcCHHHHHhhhhhhe------eeecCCCchHH
Confidence 2378888888887777777777654 99999999999
Q ss_pred HHHHHHHccCCCeEEEEcCCcCCHHHhhhccccccc--cCCccchhccccceehhchhh--hHHHHHHhhhhhhhHhhHh
Q 002029 629 LVTRLVKTKTSSTTLAIGDGANDVGMLQEADIGVGI--SGVEGMQAVMSSDIAIAQFRF--LERLLLVHGHWCYRRISSM 704 (978)
Q Consensus 629 ~iV~~lk~~~~~~v~aiGDG~ND~~ml~~AdvGI~i--~g~e~~~a~~asD~vi~~f~~--l~~lll~~gR~~~~~i~~~ 704 (978)
.+|+.+++ .|++|+++|||.||+|||++||||.+| +|+|. ||++||++|+|++| +++. +.+||..|.+|+|+
T Consensus 729 lLVk~L~~-~g~VVAVTGDGTNDaPALkeADVGlAMGIaGTeV--AKEaSDIIi~DDNFssIVk~-v~WGR~VY~nIqKF 804 (1034)
T KOG0204|consen 729 LLVKGLIK-QGEVVAVTGDGTNDAPALKEADVGLAMGIAGTEV--AKEASDIIILDDNFSSIVKA-VKWGRNVYDNIQKF 804 (1034)
T ss_pred HHHHHHHh-cCcEEEEecCCCCCchhhhhcccchhccccchhh--hhhhCCeEEEcCchHHHHHH-HHhhhHHHHHHHHh
Confidence 99999998 999999999999999999999999955 78888 99999999999665 8888 89999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhccccccchhhHHHHHHHHHHhhhhHhhhhccccCCChHHhhhCccchhcccccccccH
Q 002029 705 ICYFFYKNIAFGFTLFFFEAYASFSGQPVYNDWFLSLYNVFFTSLPVIALGVFDQDVSARFCLKFPLLYQEGVQNILFSW 784 (978)
Q Consensus 705 i~~~~~~n~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~n~i~~~~p~~~l~~~~~~~~~~~~~~~P~ly~~~~~~~~~~~ 784 (978)
++|.+.-|++.+.+.|..+... +.+|+++.|++|.|+|+|.+.+++++.++ |+++.+.|.|. +|+.++++.
T Consensus 805 iQFQLTVNVvAliv~fv~A~~~---~dsPLtAVQlLWVNLIMDTLgALALATep--Pt~~Lm~RkP~----GR~~~LIt~ 875 (1034)
T KOG0204|consen 805 LQFQLTVNVVALIVNFVSACAT---GDSPLTAVQLLWVNLIMDTLGALALATEP--PTDELMKRKPV----GRTKPLITR 875 (1034)
T ss_pred heeEEEEEEEeehhhhhhhhhc---CCccHHHHHHHHHHHHHHHHHHHHhccCC--CChHHhcCCCC----CCCCcchHH
Confidence 9999999999998988887776 67889999999999999999999999864 67777778887 999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhccccccCCCcee-hhhHHHHHHHHHHHHHHHHHHHHhhcchh-------hHHHHH
Q 002029 785 TRILGWALNGVANAAIIFFFCIHAMKQQAFRKGGEVI-GLEILGTTMYTCVVWVVNCQMALSVTYFT-------YIQHLF 856 (978)
Q Consensus 785 ~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~g~~~-~~~~~~~~~f~~~v~~~~~~~~~~~~~~~-------~~~~~~ 856 (978)
.||..++.+++||-+++|.+.+.... .++.+++.. ......|++|.++|+.+.|.-+. .|... .+.+..
T Consensus 876 tMwknil~qa~YQl~vl~iL~F~G~~--if~~~~~~~~~~~~~nTiIFNtFV~~qvFNEin-aRki~~~NvFkgi~~N~~ 952 (1034)
T KOG0204|consen 876 TMWKNILGQAVYQLIVLFILNFAGKS--IFGLNGPLHSPPSVHNTIIFNTFVFCQVFNEIN-ARKIDERNVFKGIFRNRL 952 (1034)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcchh--hhccCCCCCCchhhheeeehhHHHHHHHHHHHh-hcchhHHhHHHHHhcCce
Confidence 99999999999999999988876532 333344332 23456688999988876665432 22211 223444
Q ss_pred HHHHHHHHHHHHHHHhccCccccchhHHHHHHHhcCChHHHHHHHHHHHHHHHHHHHHHHH
Q 002029 857 IWGGITFWYIFLLAYGAMDPYISTTAYKVFIEACAPAPSFWLITLLVLMSSLLPYFTYSAI 917 (978)
Q Consensus 857 i~~si~~~~i~~~i~~~i~~~~~~~~~~~~~~~~~~s~~~wl~il~~~~~~ll~~~~~k~~ 917 (978)
+...+...++++.++..+.. . ++++.++++..|+.++++.++.++.-.+.|.+
T Consensus 953 F~~ii~~T~v~QviIveF~g---~-----~~st~~L~~~qWl~ci~~g~~sl~~g~~ik~i 1005 (1034)
T KOG0204|consen 953 FCVIITITVVSQVIIVEFGG---A-----FFSTTPLSLTQWLWCIFIGVLSLPWGQLLKCI 1005 (1034)
T ss_pred EEEEeeeeeehhhhhhhhcC---c-----ceeeecccHHHHHHHHHHHHHHHHHHHHheec
Confidence 44455566777776665543 2 56688999999999999999998888887765
No 8
>TIGR01523 ATPase-IID_K-Na potassium and/or sodium efflux P-type ATPase, fungal-type. The Leishmania sequence (GP|3192903), which falls between trusted and noise in this model, may very well turn out to be an active potassium pump.
Probab=100.00 E-value=1.4e-91 Score=872.67 Aligned_cols=748 Identities=18% Similarity=0.216 Sum_probs=543.4
Q ss_pred CceeecCceeccCCeEEEEEEEeCccchhccccC---CC-----------C------------------------CCcCH
Q 002029 42 QQLLLRDSKLRNTDCIYGAVIFTGRDTKVFQNST---GP-----------P------------------------SKRSK 83 (978)
Q Consensus 42 ~n~l~~Gs~l~~tg~~~gvVv~tG~~Tki~~~~~---~~-----------~------------------------~k~s~ 83 (978)
.|++|+||.|.+ |.+.|+|++||.+|++++... .. + ..+||
T Consensus 196 ~n~lf~GT~V~~-G~g~~vVvatG~~T~~GkIa~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~tp 274 (1053)
T TIGR01523 196 INLAFSSSAVTK-GRAKGICIATALNSEIGAIAAGLQGDGGLFQRPEKDDPNKRRKLNKWILKVTKKVTGAFLGLNVGTP 274 (1053)
T ss_pred CCccccCceEEe-eeEEEEEEEecCccHHHHHHHHHhhhhhccccccccccccchhhhcccccccccchhhccccCCCCc
Confidence 489999999997 999999999999996643321 11 0 01499
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccccccccccccCCCCCCCcCCchhhHHHHHHHHHHHHHHHhccccc
Q 002029 84 VERRMDKIIYFLFGILVLMSFIGSIFFGIATREDLQDGKMKRWYLRPDDTTAYYDPKRAAVAAVLHFLTALMLYGYLIPI 163 (978)
Q Consensus 84 l~~~~n~~~~~~~~~~~~~~~i~~i~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~iP~ 163 (978)
+|+++++++.+++.+.++++++.++...+ . .| ...++.++++++++||+
T Consensus 275 Lq~~l~~l~~~l~~i~~~~~~~~~~~~~~----~-------~~--------------------~~~~~~av~l~Va~VPe 323 (1053)
T TIGR01523 275 LHRKLSKLAVILFCIAIIFAIIVMAAHKF----D-------VD--------------------KEVAIYAICLAISIIPE 323 (1053)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHhh----h-------hh--------------------HHHHHHHHHHHHHHccc
Confidence 99999999999888888777766543211 0 00 12566788999999999
Q ss_pred hhhhhHHHHHHHHHHHHhhccccccccCCCcccccCcccccccccceEEEeeCCcccccCeeEEEEEEECCe-eeCCCch
Q 002029 164 SLYVSIEIVKILQSIFINQDLHMYYEETDKPARARTSNLNEELGQVDTILSDKTGTLTCNSMEFIKCSIAGT-SYGRGVT 242 (978)
Q Consensus 164 sL~v~i~~~~~~~~~~i~~d~~m~~~~~~~~~~~r~~~~~e~Lg~v~~I~sDKTGTLT~n~m~~~~~~i~~~-~y~~~~~ 242 (978)
+||++++++.++++. +| +++++++|+++++|+||++++||+|||||||+|+|+|+++++++. .|.....
T Consensus 324 gLp~~vti~La~g~~------rM----ak~~~lVr~L~avEtLG~vtvICsDKTGTLT~N~M~V~~i~~~~~~~~~~~~~ 393 (1053)
T TIGR01523 324 SLIAVLSITMAMGAA------NM----SKRNVIVRKLDALEALGAVNDICSDKTGTITQGKMIARQIWIPRFGTISIDNS 393 (1053)
T ss_pred chHHHHHHHHHHHHH------HH----HhcCCEeccchhhhhccCccEEEecCcCccccceEEEEEEEEcCCceEEecCC
Confidence 999999999999999 77 889999999999999999999999999999999999999998752 2211000
Q ss_pred HHHHHHHhhcCCCCccchhhhhhcccccCCcccCchhhhcC-----CCCC---CCChHHHHHHHHHHhhhcceeccccCC
Q 002029 243 EVERAMARRKGSPLEEEVTEEQEDKASIKGFNFEDERIMNG-----SWVN---EPHADVIQKFLRLLAICHTALPEVDEE 314 (978)
Q Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-----~~~~---~~~~~~~~~~~~~lalC~~~~~~~~~~ 314 (978)
..... ...+.... ..+ ............+.++... .... ...++..++++.+.++||++....++.
T Consensus 394 ~~~~~--~~~g~~~~-~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~lcn~a~~~~~~~ 467 (1053)
T TIGR01523 394 DDAFN--PNEGNVSG-IPR---FSPYEYSHNEAADQDILKEFKDELKEIDLPEDIDMDLFIKLLETAALANIATVFKDDA 467 (1053)
T ss_pred CCCCC--Cccccccc-ccc---cccccccccccccccccccccccccccccccccccHHHHHHHHHHHhccCCeeeccCC
Confidence 00000 00000000 000 0000000000000000000 0000 002245677999999999987654322
Q ss_pred CCcEEEecCCccHHHHHHHHHHcCCEEEee-c--------C-ceeEEEecCCCCCccceeEeeEeEeecCCCCCceEEEE
Q 002029 315 NGKISYEAESPDEAAFVIAARELGFEFYER-T--------Q-TSISVHELDPVTGTKVERSYSLLNVLEFSSSRKRMSVI 384 (978)
Q Consensus 315 ~~~~~y~~~sp~E~Alv~~a~~~g~~~~~r-~--------~-~~~~i~~~~~~~~~~~~~~~~il~~~~F~s~rkrmsvi 384 (978)
.+... ..+||+|.||+++|.+.|+..... + + ....+..... ++....|+++.++||||+|||||++
T Consensus 468 ~~~~~-~~GdptE~ALl~~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~pFds~rK~msvv 543 (1053)
T TIGR01523 468 TDCWK-AHGDPTEIAIHVFAKKFDLPHNALTGEEDLLKSNENDQSSLSQHNE---KPGSAQFEFIAEFPFDSEIKRMASI 543 (1053)
T ss_pred CCcee-eCcCccHHHHHHHHHHcCCCcccccchhhhhhhccccccccccccc---cccccccceEEEeccCCCCCeEEEE
Confidence 22222 347999999999999999742100 0 0 0000110000 0113568999999999999999999
Q ss_pred EEeCCC-eEEEEEeCCchHHHHHhccc-----------chhhHHHHHHHHHHHHHccceeEeeEEEeCCHHHHHHHHHHH
Q 002029 385 VRSEEG-TLLLLSKGADSVMFERLAEN-----------GREFEEQTKEHINEYADAGLRTLILAYRELDEKEYKQFNEEF 452 (978)
Q Consensus 385 v~~~~~-~~~l~~KGa~~~i~~~~~~~-----------~~~~~~~~~~~l~~~a~~Glr~l~~A~r~l~~~e~~~~~~~~ 452 (978)
++++++ ++++|+|||||.|+++|+.. +++.++.+.+++++|+++|+|||++|||.++++++..+ .+
T Consensus 544 ~~~~~~~~~~~~~KGApe~il~~c~~~~~~~~~~~~~l~~~~~~~i~~~~~~~a~~GlRvLa~A~r~l~~~~~~~~--~~ 621 (1053)
T TIGR01523 544 YEDNHGETYNIYAKGAFERIIECCSSSNGKDGVKISPLEDCDRELIIANMESLAAEGLRVLAFASKSFDKADNNDD--QL 621 (1053)
T ss_pred EEeCCCCEEEEEEeCChHHHHHhhhHhhcCCCCccccCCHHHHHHHHHHHHHHHhcCCeEEEEEEEECCchhccch--hh
Confidence 997644 58999999999999999742 22346778889999999999999999999987654221 11
Q ss_pred HHHhhcccccHHHHHHHHHHHhhcccEEEEEEeeccccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCccccC
Q 002029 453 TEAKNSVSADREELAEEIAEKIEKNLILLGATAVEDKLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQG 532 (978)
Q Consensus 453 ~~a~~~l~~~r~~~~~~~~~~ie~dl~llG~i~ieD~lr~~v~~~I~~L~~aGIkv~mlTGD~~~tA~~ia~~~gl~~~~ 532 (978)
.+ .. .+ .+.+|+||+|+|+++++||+|++++++|+.|++|||++||+|||+..||.+||++|||+.++
T Consensus 622 ~~---~~-~~--------~~~~e~~L~~~G~~~~~Dp~r~~v~~aI~~l~~aGIkv~MiTGD~~~tA~~iA~~~Gi~~~~ 689 (1053)
T TIGR01523 622 KN---ET-LN--------RATAESDLEFLGLIGIYDPPRNESAGAVEKCHQAGINVHMLTGDFPETAKAIAQEVGIIPPN 689 (1053)
T ss_pred hc---cc-cc--------hhhhccCCEEEEEEeeecCCchhHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHcCCCCcc
Confidence 00 00 01 24578999999999999999999999999999999999999999999999999999998643
Q ss_pred ceEEEEecCCCcccccchhhhHHHHHHHHHHHHHHHHHhhhhhhccccCCCCCeEEEEcCchhhhhchhhHHHHHHHHHh
Q 002029 533 MRQVIISSETPESKTLEKSEDKSAAAAALKASVLHQLIRGKELLDSSNESLGPLALIIDGKSLTYALEDDVKDLFLELAI 612 (978)
Q Consensus 533 ~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~f~~l~~ 612 (978)
... ... ......+++|.+++.+.++++.+...
T Consensus 690 ~~~---~~~-----------------------------------------~~~~~~vitG~~l~~l~~~~l~~~~~---- 721 (1053)
T TIGR01523 690 FIH---DRD-----------------------------------------EIMDSMVMTGSQFDALSDEEVDDLKA---- 721 (1053)
T ss_pred ccc---ccc-----------------------------------------ccccceeeehHHhhhcCHHHHHHHhh----
Confidence 110 000 00113599999998877666554332
Q ss_pred ccCeeEEEeCCchhHHHHHHHHHccCCCeEEEEcCCcCCHHHhhhcccccccc--CCccchhccccceehhc--hhhhHH
Q 002029 613 GCASVICCRSSPKQKALVTRLVKTKTSSTTLAIGDGANDVGMLQEADIGVGIS--GVEGMQAVMSSDIAIAQ--FRFLER 688 (978)
Q Consensus 613 ~~~~vi~~r~sP~qK~~iV~~lk~~~~~~v~aiGDG~ND~~ml~~AdvGI~i~--g~e~~~a~~asD~vi~~--f~~l~~ 688 (978)
...||||++|+||.++|+.+|+ .|++|+|+|||+||+|||++|||||+|+ |++. |+++||+++.+ |+.+.+
T Consensus 722 --~~~V~ar~sP~~K~~iV~~lq~-~g~~Vam~GDGvNDapaLk~AdVGIAmg~~gt~v--ak~aADivl~dd~f~~I~~ 796 (1053)
T TIGR01523 722 --LCLVIARCAPQTKVKMIEALHR-RKAFCAMTGDGVNDSPSLKMANVGIAMGINGSDV--AKDASDIVLSDDNFASILN 796 (1053)
T ss_pred --cCeEEEecCHHHHHHHHHHHHh-cCCeeEEeCCCcchHHHHHhCCccEecCCCccHH--HHHhcCEEEecCCHHHHHH
Confidence 3469999999999999999998 8999999999999999999999999873 5565 89999999998 777999
Q ss_pred HHHHhhhhhhhHhhHhHHHHHHHHHHHHHHHHHHHHhhcccccc--chhhHHHHHHHHHHhhhhHhhhhccccCCChHHh
Q 002029 689 LLLVHGHWCYRRISSMICYFFYKNIAFGFTLFFFEAYASFSGQP--VYNDWFLSLYNVFFTSLPVIALGVFDQDVSARFC 766 (978)
Q Consensus 689 lll~~gR~~~~~i~~~i~~~~~~n~~~~~~~~~~~~~~~~s~~~--~~~~~~~~~~n~i~~~~p~~~l~~~~~~~~~~~~ 766 (978)
+ +.|||++|+|+++++.|.+++|+..+++.+++.++..++|.+ +++++|++|+|++++.+|++++++++ ++++.+
T Consensus 797 ~-i~~gR~~~~ni~k~i~y~l~~ni~~i~~~~~~~~~~~~~g~~~~Pl~~~qiL~inli~d~~palaL~~e~--~~~~~m 873 (1053)
T TIGR01523 797 A-IEEGRRMFDNIMKFVLHLLAENVAEAILLIIGLAFRDENGKSVFPLSPVEILWCIMITSCFPAMGLGLEK--AAPDLM 873 (1053)
T ss_pred H-HHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHhcccCCCcCchHHHHHHHHHHHHHHHHHHhhccCC--CChhHH
Confidence 9 899999999999999999999999999999999988777764 58899999999999999999999853 556666
Q ss_pred hhCccchhcccccccccHHHHHHHHHHHHHHHHHHHHHHHHhhcc---cccc-----CCCce-ehhhHHHHHHHHHHHHH
Q 002029 767 LKFPLLYQEGVQNILFSWTRILGWALNGVANAAIIFFFCIHAMKQ---QAFR-----KGGEV-IGLEILGTTMYTCVVWV 837 (978)
Q Consensus 767 ~~~P~ly~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~---~~~~-----~~g~~-~~~~~~~~~~f~~~v~~ 837 (978)
.++|+ .+..+++++.+++.+++.|++++++++..+++.+.. .... ..+.. .+.....|++|+++++.
T Consensus 874 ~~~Pr----~~~~~l~~~~~~~~~~~~g~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~t~~f~~l~~~ 949 (1053)
T TIGR01523 874 DRLPH----DNEVGIFQKELIIDMFAYGFFLGGSCLASFTGILYGFGSGNLGHDCDAHYHAGCNDVFKARSAAFATMTFC 949 (1053)
T ss_pred hcCCC----CCCccccCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCccccccccccccccccchhhhHHHHHHHHHHH
Confidence 66665 566789999999999999999998887666543221 0000 00000 12334578888888887
Q ss_pred HHHHHHHhhcc-----hh-----------------hHHHHHHHHHHHHHHHHHHHHhccCccccchhHHHHHHHhcCChH
Q 002029 838 VNCQMALSVTY-----FT-----------------YIQHLFIWGGITFWYIFLLAYGAMDPYISTTAYKVFIEACAPAPS 895 (978)
Q Consensus 838 ~~~~~~~~~~~-----~~-----------------~~~~~~i~~si~~~~i~~~i~~~i~~~~~~~~~~~~~~~~~~s~~ 895 (978)
+.++.+ ..++ |. .+.|.++++++++.++++++..++|+. +.. +|+..+.++
T Consensus 950 ~~~~~~-~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~l~~~~~~~~~l~~~~~~~p~~-~~~----~f~~~~l~~- 1022 (1053)
T TIGR01523 950 ALILAV-EVKDFDNSFFNLHGIPDGDSNFKEFFHSIVENKFLAWAIAFAAVSAFPTIYIPVI-NDD----VFKHKPIGA- 1022 (1053)
T ss_pred HHHHHH-HHhcCchhhhhcCccccccccccccccCCccCHHHHHHHHHHHHHHHHHHhhhhh-hhh----hhccCCcch-
Confidence 766653 2222 11 236778889999999999999999853 321 556777775
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhC
Q 002029 896 FWLITLLVLMSSLLPYFTYSAIQMRFF 922 (978)
Q Consensus 896 ~wl~il~~~~~~ll~~~~~k~~~r~~~ 922 (978)
.|+.++.++++.++.+++.|+++|++.
T Consensus 1023 ~w~~~~~~~~~~~~~~e~~K~~~r~~~ 1049 (1053)
T TIGR01523 1023 EWGLAAAATIAFFFGAEIWKCGKRRLF 1049 (1053)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 899999999999999999999987653
No 9
>TIGR01116 ATPase-IIA1_Ca sarco/endoplasmic reticulum calcium-translocating P-type ATPase. The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1, the latter of which is modelled by TIGR01522.
Probab=100.00 E-value=2.3e-91 Score=869.12 Aligned_cols=726 Identities=21% Similarity=0.234 Sum_probs=547.9
Q ss_pred CceeecCceeccCCeEEEEEEEeCccchhcc---ccCCCCCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh-hccc
Q 002029 42 QQLLLRDSKLRNTDCIYGAVIFTGRDTKVFQ---NSTGPPSKRSKVERRMDKIIYFLFGILVLMSFIGSIFFGIA-TRED 117 (978)
Q Consensus 42 ~n~l~~Gs~l~~tg~~~gvVv~tG~~Tki~~---~~~~~~~k~s~l~~~~n~~~~~~~~~~~~~~~i~~i~~~~~-~~~~ 117 (978)
+|++|+||.+.+ |++.|+|++||.+|++++ +...++.++||+|+++++++..++.+.++++++.+++...+ ....
T Consensus 149 ~n~l~~GT~v~~-G~~~~~V~~tG~~T~~gki~~~~~~~~~~~t~lq~~l~~~~~~l~~~~~~~~~i~~~~~~~~~~~~~ 227 (917)
T TIGR01116 149 KNMLFSGTLVVA-GKARGVVVRTGMSTEIGKIRDEMRAAEQEDTPLQKKLDEFGELLSKVIGLICILVWVINIGHFNDPA 227 (917)
T ss_pred cceeeeCCEEec-ceEEEEEEEeCCCCHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccc
Confidence 399999999998 999999999999997754 55667788999999999999999887777777665543221 1000
Q ss_pred cccccccccccCCCCCCCcCCchhhHHHHHHHHHHHHHHHhccccchhhhhHHHHHHHHHHHHhhccccccccCCCcccc
Q 002029 118 LQDGKMKRWYLRPDDTTAYYDPKRAAVAAVLHFLTALMLYGYLIPISLYVSIEIVKILQSIFINQDLHMYYEETDKPARA 197 (978)
Q Consensus 118 ~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~iP~sL~v~i~~~~~~~~~~i~~d~~m~~~~~~~~~~~ 197 (978)
.. ..| .......+..++++++++||++||++++++.++++. +| +++++++
T Consensus 228 ~~----~~~----------------~~~~~~~~~~~i~l~v~~iP~~Lp~~vti~l~~~~~------~m----~~~~ilv 277 (917)
T TIGR01116 228 LG----GGW----------------IQGAIYYFKIAVALAVAAIPEGLPAVITTCLALGTR------KM----AKKNAIV 277 (917)
T ss_pred cc----chh----------------HHHHHHHHHHHHhhhhhccccccHHHHHHHHHHHHH------HH----HHCCcEe
Confidence 00 011 122344566788999999999999999999999998 66 7889999
Q ss_pred cCcccccccccceEEEeeCCcccccCeeEEEEEEECCeeeCCCchHHHHHHHhhcCCCCccchhhhhhcccccCCcccCc
Q 002029 198 RTSNLNEELGQVDTILSDKTGTLTCNSMEFIKCSIAGTSYGRGVTEVERAMARRKGSPLEEEVTEEQEDKASIKGFNFED 277 (978)
Q Consensus 198 r~~~~~e~Lg~v~~I~sDKTGTLT~n~m~~~~~~i~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 277 (978)
|+++++|+||++++||||||||||+|+|+|.+++..+..+... ... ...+..+..
T Consensus 278 k~~~~iE~lg~v~~ic~DKTGTLT~n~m~v~~~~~~~~~~~~~-~~~------------------------~~~~~~~~~ 332 (917)
T TIGR01116 278 RKLPSVETLGCTTVICSDKTGTLTTNQMSVCKVVALDPSSSSL-NEF------------------------CVTGTTYAP 332 (917)
T ss_pred cCcHHHHhccCceEEEecCCccccCCeEEEEEEEecCCccccc-ceE------------------------EecCCccCC
Confidence 9999999999999999999999999999999998765432100 000 000000000
Q ss_pred --hhhhcCCCCCCCChHHHHHHHHHHhhhcceeccccCCCCcEEEecCCccHHHHHHHHHHcCCEEEeecCceeEEEecC
Q 002029 278 --ERIMNGSWVNEPHADVIQKFLRLLAICHTALPEVDEENGKISYEAESPDEAAFVIAARELGFEFYERTQTSISVHELD 355 (978)
Q Consensus 278 --~~l~~~~~~~~~~~~~~~~~~~~lalC~~~~~~~~~~~~~~~y~~~sp~E~Alv~~a~~~g~~~~~r~~~~~~i~~~~ 355 (978)
..+.+.........+..+++++++++||++.+..++.++... ..+||+|.||++++.+.|+....+..+.+.....+
T Consensus 333 ~~~~~~~~~~~~~~~~~~~~~l~~~~~lc~~~~~~~~~~~~~~~-~~gdp~E~ALl~~~~~~g~~~~~~~~~~~~~~~~~ 411 (917)
T TIGR01116 333 EGGVIKDDGPVAGGQDAGLEELATIAALCNDSSLDFNERKGVYE-KVGEATEAALKVLVEKMGLPATKNGVSSKRRPALG 411 (917)
T ss_pred CccccccCCcccccchHHHHHHHHHHHhcCCCeeeccccCCcee-eccChhHHHHHHHHHHcCCCchhcccccccccccc
Confidence 000000000111234567889999999998775433322222 14799999999999999987765544333322211
Q ss_pred CCCCccceeEeeEeEeecCCCCCceEEEEEEeCCCeEEEEEeCCchHHHHHhccc----------chhhHHHHHHHHHHH
Q 002029 356 PVTGTKVERSYSLLNVLEFSSSRKRMSVIVRSEEGTLLLLSKGADSVMFERLAEN----------GREFEEQTKEHINEY 425 (978)
Q Consensus 356 ~~~~~~~~~~~~il~~~~F~s~rkrmsviv~~~~~~~~l~~KGa~~~i~~~~~~~----------~~~~~~~~~~~l~~~ 425 (978)
.. ...+..|++++.+||||+||||||+++. ++++++|+|||||.|+++|+.. +++.++++.+++++|
T Consensus 412 ~~--~~~~~~~~~~~~~pF~s~rK~msviv~~-~~~~~~~~KGApe~il~~c~~~~~~~g~~~~l~~~~~~~i~~~~~~~ 488 (917)
T TIGR01116 412 CN--SVWNDKFKKLATLEFSRDRKSMSVLCKP-STGNKLFVKGAPEGVLERCTHILNGDGRAVPLTDKMKNTILSVIKEM 488 (917)
T ss_pred hh--HHHHhhcceeeecccChhhCeEEEEEee-CCcEEEEEcCChHHHHHhccceecCCCCeeeCCHHHHHHHHHHHHHH
Confidence 10 0113568899999999999999999996 4678999999999999999742 134567788999999
Q ss_pred HH-ccceeEeeEEEeCCHHHHHHHHHHHHHHhhcccccHHHHHHHHHHHhhcccEEEEEEeeccccCCChHHHHHHHHHc
Q 002029 426 AD-AGLRTLILAYRELDEKEYKQFNEEFTEAKNSVSADREELAEEIAEKIEKNLILLGATAVEDKLQNGVPECIDKLAQA 504 (978)
Q Consensus 426 a~-~Glr~l~~A~r~l~~~e~~~~~~~~~~a~~~l~~~r~~~~~~~~~~ie~dl~llG~i~ieD~lr~~v~~~I~~L~~a 504 (978)
++ +|+|||++|||.+++++.. +. . .+ ....+.+|+||+|+|+++++||+|++++++|+.|++|
T Consensus 489 a~~~GlRvl~~A~k~~~~~~~~-~~---------~-~~-----~~~~~~~e~~l~~lGl~~~~Dplr~~v~e~I~~l~~a 552 (917)
T TIGR01116 489 GTTKALRCLALAFKDIPDPREE-DL---------L-SD-----PANFEAIESDLTFIGVVGMLDPPRPEVADAIEKCRTA 552 (917)
T ss_pred HhhcCCeEEEEEEEECCccccc-cc---------c-cc-----chhhhhhcCCcEEEEEeeeeCCCchhHHHHHHHHHHC
Confidence 99 9999999999999764321 00 0 01 1123568999999999999999999999999999999
Q ss_pred CCeEEEEcCCChhhHHHHHHHcCccccCceEEEEecCCCcccccchhhhHHHHHHHHHHHHHHHHHhhhhhhccccCCCC
Q 002029 505 GIKLWVLTGDKMETAINIGFACSLLRQGMRQVIISSETPESKTLEKSEDKSAAAAALKASVLHQLIRGKELLDSSNESLG 584 (978)
Q Consensus 505 GIkv~mlTGD~~~tA~~ia~~~gl~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 584 (978)
||++||+|||+.+||.++|+++|+..++...
T Consensus 553 GI~v~miTGD~~~tA~~ia~~~gi~~~~~~v------------------------------------------------- 583 (917)
T TIGR01116 553 GIRVIMITGDNKETAEAICRRIGIFSPDEDV------------------------------------------------- 583 (917)
T ss_pred CCEEEEecCCCHHHHHHHHHHcCCCCCCccc-------------------------------------------------
Confidence 9999999999999999999999997644221
Q ss_pred CeEEEEcCchhhhhchhhHHHHHHHHHhccCeeEEEeCCchhHHHHHHHHHccCCCeEEEEcCCcCCHHHhhhccccccc
Q 002029 585 PLALIIDGKSLTYALEDDVKDLFLELAIGCASVICCRSSPKQKALVTRLVKTKTSSTTLAIGDGANDVGMLQEADIGVGI 664 (978)
Q Consensus 585 ~~~lvi~G~~l~~~~~~~~~~~f~~l~~~~~~vi~~r~sP~qK~~iV~~lk~~~~~~v~aiGDG~ND~~ml~~AdvGI~i 664 (978)
....++|++++.+.+++... ..++.+||||++|+||.++|+.+|+ .|++|+|+|||+||+|||++|||||+|
T Consensus 584 -~~~~~~g~~l~~~~~~~~~~------~~~~~~v~ar~~P~~K~~iV~~lq~-~g~~va~iGDG~ND~~alk~AdVGia~ 655 (917)
T TIGR01116 584 -TFKSFTGREFDEMGPAKQRA------ACRSAVLFSRVEPSHKSELVELLQE-QGEIVAMTGDGVNDAPALKKADIGIAM 655 (917)
T ss_pred -cceeeeHHHHhhCCHHHHHH------hhhcCeEEEecCHHHHHHHHHHHHh-cCCeEEEecCCcchHHHHHhCCeeEEC
Confidence 01256666665544433222 2245679999999999999999997 899999999999999999999999999
Q ss_pred -cCCccchhccccceehhc--hhhhHHHHHHhhhhhhhHhhHhHHHHHHHHHHHHHHHHHHHHhhccccccchhhHHHHH
Q 002029 665 -SGVEGMQAVMSSDIAIAQ--FRFLERLLLVHGHWCYRRISSMICYFFYKNIAFGFTLFFFEAYASFSGQPVYNDWFLSL 741 (978)
Q Consensus 665 -~g~e~~~a~~asD~vi~~--f~~l~~lll~~gR~~~~~i~~~i~~~~~~n~~~~~~~~~~~~~~~~s~~~~~~~~~~~~ 741 (978)
+|++. |+++||+++.+ |+.+.++ +.|||++|+|+++++.|.+++|+..+++.+++.++. ...+++++|++|
T Consensus 656 g~g~~~--ak~aAD~vl~dd~f~~i~~~-i~~GR~~~~ni~k~i~~~l~~ni~~~~~~~~~~~~~---~~~pl~~~qll~ 729 (917)
T TIGR01116 656 GSGTEV--AKEASDMVLADDNFATIVAA-VEEGRAIYNNMKQFIRYMISSNIGEVVCIFLTAALG---IPEGLIPVQLLW 729 (917)
T ss_pred CCCcHH--HHHhcCeEEccCCHHHHHHH-HHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHc---CCchHHHHHHHH
Confidence 44444 88999999998 8889999 799999999999999999999999999999987763 235799999999
Q ss_pred HHHHHhhhhHhhhhccccCCChHHhhhCccchhcccccccccHHHHHHHHHHHHHHHHHHHHHHHHhhccccc-cC----
Q 002029 742 YNVFFTSLPVIALGVFDQDVSARFCLKFPLLYQEGVQNILFSWTRILGWALNGVANAAIIFFFCIHAMKQQAF-RK---- 816 (978)
Q Consensus 742 ~n~i~~~~p~~~l~~~~~~~~~~~~~~~P~ly~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~-~~---- 816 (978)
+|++++.+|++++++++ ++++.+.++|+ .++++++++++++.|++.|+++++++++.+++.+....+ ..
T Consensus 730 inli~d~lp~~~l~~~~--~~~~~m~~pP~----~~~~~l~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 803 (917)
T TIGR01116 730 VNLVTDGLPATALGFNP--PDKDIMWKPPR----RPDEPLITGWLFFRYLVVGVYVGLATVGGFVWWYLLTHFTGCDEDS 803 (917)
T ss_pred HHHHHHHHHHHHHhcCC--cchhHhcCCCC----CCCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCcccccccc
Confidence 99999999999999865 44666666665 567889999999999999999998876655543321011 00
Q ss_pred -------CCce----ehhhHHHHHHHHHHHHHHHHHHHHhhcc--hh-----hHHHHHHHHHHHHHHHHHHHHhccCccc
Q 002029 817 -------GGEV----IGLEILGTTMYTCVVWVVNCQMALSVTY--FT-----YIQHLFIWGGITFWYIFLLAYGAMDPYI 878 (978)
Q Consensus 817 -------~g~~----~~~~~~~~~~f~~~v~~~~~~~~~~~~~--~~-----~~~~~~i~~si~~~~i~~~i~~~i~~~~ 878 (978)
++.. .+.....|++|+++++.+.++.+. .|+ .+ .+.|.++|+++++.+++++++.++|. +
T Consensus 804 ~~~~~~~~~~~~~~~~~~~~~~t~~f~~~v~~q~~~~~~-~r~~~~~~~~~~~~~n~~~~~~~~~~~~l~~~~~~v~~-~ 881 (917)
T TIGR01116 804 FTTCPDFEDPDCYVFEGKQPARTISLSVLVVIEMFNALN-ALSEDQSLLRMPPWVNKWLIGAICLSMALHFLILYVPF-L 881 (917)
T ss_pred cccccccccccccccccccchHHHHHHHHHHHHHHHHHH-HcCCcccccccCCccCHHHHHHHHHHHHHHHHHHHhHH-H
Confidence 1100 012345689999998888777643 222 11 23567888888888888888888884 3
Q ss_pred cchhHHHHHHHhcCChHHHHHHHHHHHHHHHHHHHHHHHHH
Q 002029 879 STTAYKVFIEACAPAPSFWLITLLVLMSSLLPYFTYSAIQM 919 (978)
Q Consensus 879 ~~~~~~~~~~~~~~s~~~wl~il~~~~~~ll~~~~~k~~~r 919 (978)
+. +|+..+.++..|+.+++++++.++.+++.|+++|
T Consensus 882 ~~-----~f~~~~l~~~~w~~~~~~~~~~~~~~e~~k~~~~ 917 (917)
T TIGR01116 882 SR-----IFGVTPLSLTDWLMVLKLSLPVILVDEVLKFFSR 917 (917)
T ss_pred HH-----HhccCCCCHHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 44 6778899999999999999999999999998764
No 10
>TIGR01106 ATPase-IIC_X-K sodium or proton efflux -- potassium uptake antiporter, P-type ATPase, alpha subunit. Sequences from Blastocladiella emersonii (GP|6636502, GP|6636502 and PIR|T43025), C. elegans (GP|2315419, GP|6671808 and PIR|T31763) and Drosophila melanogaster (GP|7291424) score below trusted cutoff, apparently due to long branch length (excessive divergence from the last common ancestor) as evidenced by a phylogenetic tree. Experimental evidence is needed to determine whether these sequences represent ATPases with conserved function. Aside from fragments, other sequences between trusted and noise appear to be bacterial ATPases of unclear lineage, but most likely calcium pumps.
Probab=100.00 E-value=5.6e-89 Score=852.96 Aligned_cols=717 Identities=19% Similarity=0.207 Sum_probs=544.9
Q ss_pred CceeecCceeccCCeEEEEEEEeCccchhccccC---CCCCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccc
Q 002029 42 QQLLLRDSKLRNTDCIYGAVIFTGRDTKVFQNST---GPPSKRSKVERRMDKIIYFLFGILVLMSFIGSIFFGIATREDL 118 (978)
Q Consensus 42 ~n~l~~Gs~l~~tg~~~gvVv~tG~~Tki~~~~~---~~~~k~s~l~~~~n~~~~~~~~~~~~~~~i~~i~~~~~~~~~~ 118 (978)
+|++|+||.+.+ |++.|+|++||.+|+++++.. ..+.+++|+++.+++++..+..+.++++++.++++.+ .+.
T Consensus 214 ~n~l~~Gt~v~~-G~~~~~V~~tG~~T~~g~i~~~~~~~~~~~~pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~-- 289 (997)
T TIGR01106 214 RNIAFFSTNCVE-GTARGIVVNTGDRTVMGRIASLASGLENGKTPIAIEIEHFIHIITGVAVFLGVSFFILSLI-LGY-- 289 (997)
T ss_pred CCeEEeccEeee-eeEEEEEEEccccchhhHHHhhhhhcccCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hcC--
Confidence 479999999997 999999999999998865543 5566789999999999999888877777665544322 111
Q ss_pred ccccccccccCCCCCCCcCCchhhHHHHHHHHHHHHHHHhccccchhhhhHHHHHHHHHHHHhhccccccccCCCccccc
Q 002029 119 QDGKMKRWYLRPDDTTAYYDPKRAAVAAVLHFLTALMLYGYLIPISLYVSIEIVKILQSIFINQDLHMYYEETDKPARAR 198 (978)
Q Consensus 119 ~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~iP~sL~v~i~~~~~~~~~~i~~d~~m~~~~~~~~~~~r 198 (978)
.| ...+..++++++.+||++||++++++.+.++. +| +++++++|
T Consensus 290 ------~~--------------------~~~~~~~i~v~v~~iP~~L~~~v~i~l~~~~~------~m----~~~~ilvk 333 (997)
T TIGR01106 290 ------TW--------------------LEAVIFLIGIIVANVPEGLLATVTVCLTLTAK------RM----ARKNCLVK 333 (997)
T ss_pred ------CH--------------------HHHHHHHHHHHhhcCCccchHHHHHHHHHHHH------HH----HHCCcEec
Confidence 12 12566778888899999999999999999988 56 78899999
Q ss_pred CcccccccccceEEEeeCCcccccCeeEEEEEEECCeeeCCCchHHHHHHHhhcCCCCccchhhhhhcccccCCcccCch
Q 002029 199 TSNLNEELGQVDTILSDKTGTLTCNSMEFIKCSIAGTSYGRGVTEVERAMARRKGSPLEEEVTEEQEDKASIKGFNFEDE 278 (978)
Q Consensus 199 ~~~~~e~Lg~v~~I~sDKTGTLT~n~m~~~~~~i~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 278 (978)
+++++|+||++++||||||||||+|+|+|+++++++..|..+.... ..+.
T Consensus 334 ~~~aiE~lg~v~~ic~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~-------------------------~~~~----- 383 (997)
T TIGR01106 334 NLEAVETLGSTSTICSDKTGTLTQNRMTVAHMWFDNQIHEADTTED-------------------------QSGV----- 383 (997)
T ss_pred CcHHHHHhcCCCEEEECCCCceecCceEEEEEEECCeEEecCCccC-------------------------CCCc-----
Confidence 9999999999999999999999999999999999887764321000 0000
Q ss_pred hhhcCCCCCCCChHHHHHHHHHHhhhcceeccccCCC--CcEEEecCCccHHHHHHHHHHcCCEEEeecCceeEEEecCC
Q 002029 279 RIMNGSWVNEPHADVIQKFLRLLAICHTALPEVDEEN--GKISYEAESPDEAAFVIAARELGFEFYERTQTSISVHELDP 356 (978)
Q Consensus 279 ~l~~~~~~~~~~~~~~~~~~~~lalC~~~~~~~~~~~--~~~~y~~~sp~E~Alv~~a~~~g~~~~~r~~~~~~i~~~~~ 356 (978)
..+......+.++.++++||++.+..+... ..-.+..+||+|.||++++...+.....
T Consensus 384 -------~~~~~~~~~~~ll~~~alcn~~~~~~~~~~~~~~~~~~~gdp~E~ALl~~a~~~~~~~~~------------- 443 (997)
T TIGR01106 384 -------SFDKSSATWLALSRIAGLCNRAVFKAGQENVPILKRAVAGDASESALLKCIELCLGSVME------------- 443 (997)
T ss_pred -------cCCcccHHHHHHHHHHHHcCCCeeccccCCCcccccccCcChHHHHHHHHHHHhCCCHHH-------------
Confidence 000122345678899999999876533211 0112456899999999999865432110
Q ss_pred CCCccceeEeeEeEeecCCCCCceEEEEEEeC---CCeEEEEEeCCchHHHHHhccc---------chhhHHHHHHHHHH
Q 002029 357 VTGTKVERSYSLLNVLEFSSSRKRMSVIVRSE---EGTLLLLSKGADSVMFERLAEN---------GREFEEQTKEHINE 424 (978)
Q Consensus 357 ~~~~~~~~~~~il~~~~F~s~rkrmsviv~~~---~~~~~l~~KGa~~~i~~~~~~~---------~~~~~~~~~~~l~~ 424 (978)
.+..|+++..+||||+||||+++++.. ++++++|+|||||.|+++|+.. +++.++.+.+.+++
T Consensus 444 -----~~~~~~~v~~~pF~s~rK~m~~v~~~~~~~~~~~~~~~KGApe~Il~~c~~~~~~g~~~~l~~~~~~~~~~~~~~ 518 (997)
T TIGR01106 444 -----MRERNPKVVEIPFNSTNKYQLSIHENEDPRDPRHLLVMKGAPERILERCSSILIHGKEQPLDEELKEAFQNAYLE 518 (997)
T ss_pred -----HHhhCceeEEeccCCCCceEEEEEeccCCCCceEEEEEeCChHHHHHHhhHHhcCCCcccCCHHHHHHHHHHHHH
Confidence 135688899999999999999988643 3568999999999999999741 23456778888999
Q ss_pred HHHccceeEeeEEEeCCHHHHHH-HHHHHHHHhhcccccHHHHHHHHHHHhhcccEEEEEEeeccccCCChHHHHHHHHH
Q 002029 425 YADAGLRTLILAYRELDEKEYKQ-FNEEFTEAKNSVSADREELAEEIAEKIEKNLILLGATAVEDKLQNGVPECIDKLAQ 503 (978)
Q Consensus 425 ~a~~Glr~l~~A~r~l~~~e~~~-~~~~~~~a~~~l~~~r~~~~~~~~~~ie~dl~llG~i~ieD~lr~~v~~~I~~L~~ 503 (978)
|+++|+|||++|||.++++++++ |.. +++ ..+.+|+||+|+|+++++||+|++|+++|++|++
T Consensus 519 ~a~~GlRvla~A~k~l~~~~~~~~~~~-----------~~~-----~~~~~e~~L~flGli~i~Dplr~~v~~aI~~l~~ 582 (997)
T TIGR01106 519 LGGLGERVLGFCHLYLPDEQFPEGFQF-----------DTD-----DVNFPTDNLCFVGLISMIDPPRAAVPDAVGKCRS 582 (997)
T ss_pred HHhcCCEEEEEEEeecCcccccccccc-----------cch-----hhhccccCcEEEEEEeccCCChHHHHHHHHHHHH
Confidence 99999999999999998765432 110 111 1134589999999999999999999999999999
Q ss_pred cCCeEEEEcCCChhhHHHHHHHcCccccCceEEEEecCCCcccccchhhhHHHHHHHHHHHHHHHHHhhhhhhccccCCC
Q 002029 504 AGIKLWVLTGDKMETAINIGFACSLLRQGMRQVIISSETPESKTLEKSEDKSAAAAALKASVLHQLIRGKELLDSSNESL 583 (978)
Q Consensus 504 aGIkv~mlTGD~~~tA~~ia~~~gl~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 583 (978)
+||+++|+|||+..||.++|+++|++.++.... ++ + . .+.....+.. ++.
T Consensus 583 ~Gi~v~~~TGd~~~ta~~ia~~~gi~~~~~~~~----~~-----i---------~--------~~~~~~~~~~----~~~ 632 (997)
T TIGR01106 583 AGIKVIMVTGDHPITAKAIAKGVGIISEGNETV----ED-----I---------A--------ARLNIPVSQV----NPR 632 (997)
T ss_pred CCCeEEEECCCCHHHHHHHHHHcCCCCCCccch----hh-----h---------h--------hhcccccccc----ccc
Confidence 999999999999999999999999987653210 00 0 0 0000000000 011
Q ss_pred CCeEEEEcCchhhhhchhhHHHHHHHHHhccCeeEEEeCCchhHHHHHHHHHccCCCeEEEEcCCcCCHHHhhhcccccc
Q 002029 584 GPLALIIDGKSLTYALEDDVKDLFLELAIGCASVICCRSSPKQKALVTRLVKTKTSSTTLAIGDGANDVGMLQEADIGVG 663 (978)
Q Consensus 584 ~~~~lvi~G~~l~~~~~~~~~~~f~~l~~~~~~vi~~r~sP~qK~~iV~~lk~~~~~~v~aiGDG~ND~~ml~~AdvGI~ 663 (978)
....++++|++++.+.++++.+ +...++.+||||++|+||.++|+.+|+ .|++|+|+|||+||+|||++|||||+
T Consensus 633 ~~~~~vi~G~~l~~l~~~el~~----~~~~~~~~VfaR~sPeqK~~IV~~lq~-~g~vv~~~GDG~ND~paLk~AdVGia 707 (997)
T TIGR01106 633 DAKACVVHGSDLKDMTSEQLDE----ILKYHTEIVFARTSPQQKLIIVEGCQR-QGAIVAVTGDGVNDSPALKKADIGVA 707 (997)
T ss_pred cccceEEEhHHhhhCCHHHHHH----HHHhcCCEEEEECCHHHHHHHHHHHHH-CCCEEEEECCCcccHHHHhhCCccee
Confidence 1234799999999887765443 444556679999999999999999998 89999999999999999999999997
Q ss_pred c--cCCccchhccccceehhc--hhhhHHHHHHhhhhhhhHhhHhHHHHHHHHHHHHHHHHHHHHhhccccccchhhHHH
Q 002029 664 I--SGVEGMQAVMSSDIAIAQ--FRFLERLLLVHGHWCYRRISSMICYFFYKNIAFGFTLFFFEAYASFSGQPVYNDWFL 739 (978)
Q Consensus 664 i--~g~e~~~a~~asD~vi~~--f~~l~~lll~~gR~~~~~i~~~i~~~~~~n~~~~~~~~~~~~~~~~s~~~~~~~~~~ 739 (978)
| +|++. |+++||+++.| |+.+.++ +.|||++|.|+++++.|.+++|+..+++.+++.++. +..+++++|+
T Consensus 708 mg~~G~~v--ak~aADivL~dd~f~~Iv~a-i~~GR~i~~ni~k~i~~~l~~ni~~~~~~~~~~~~~---~~~pl~~~ql 781 (997)
T TIGR01106 708 MGIAGSDV--SKQAADMILLDDNFASIVTG-VEEGRLIFDNLKKSIAYTLTSNIPEITPFLIFIIAN---IPLPLGTITI 781 (997)
T ss_pred cCCcccHH--HHHhhceEEecCCHHHHHHH-HHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHc---CcchhHHHHH
Confidence 7 46676 89999999999 7779998 899999999999999999999999999999998875 3346889999
Q ss_pred HHHHHHHhhhhHhhhhccccCCChHHhhhCccchhcccccccccHHHHHHHH-HHHHHHHHHHHHHHHHhhcccc-----
Q 002029 740 SLYNVFFTSLPVIALGVFDQDVSARFCLKFPLLYQEGVQNILFSWTRILGWA-LNGVANAAIIFFFCIHAMKQQA----- 813 (978)
Q Consensus 740 ~~~n~i~~~~p~~~l~~~~~~~~~~~~~~~P~ly~~~~~~~~~~~~~~~~~~-~~~~~~s~~~~~~~~~~~~~~~----- 813 (978)
+|+|++++++|+++++.++ ++++.+.++|+ ..+..+++++++++.|+ ..|++++++.|+.+++.+...+
T Consensus 782 L~inli~d~lp~~al~~e~--~~~~~m~~~P~---~~~~~~l~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~g~~~~~ 856 (997)
T TIGR01106 782 LCIDLGTDMVPAISLAYEK--AESDIMKRQPR---NPKTDKLVNERLISMAYGQIGMIQALGGFFTYFVILAENGFLPLH 856 (997)
T ss_pred HHHHHHHHHHHHHHHhcCC--CCcccccCCCc---CCccccccCHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCcccc
Confidence 9999999999999999853 66677777887 23467899998887765 4599999888877665432111
Q ss_pred -ccC---------CCc--ee-----------hhhHHHHHHHHHHHHHHHHHHHH-hhcchhh----HHHHHHHHHHHHHH
Q 002029 814 -FRK---------GGE--VI-----------GLEILGTTMYTCVVWVVNCQMAL-SVTYFTY----IQHLFIWGGITFWY 865 (978)
Q Consensus 814 -~~~---------~g~--~~-----------~~~~~~~~~f~~~v~~~~~~~~~-~~~~~~~----~~~~~i~~si~~~~ 865 (978)
+.. ++. .. ....+.|++|+++++.+.+.... ++...+. +.+..++.++++.+
T Consensus 857 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~f~~~v~~q~~~~~~~R~~~~~~f~~~~~n~~l~~~~~~~~ 936 (997)
T TIGR01106 857 LVGLRVQWDDRWINDLEDSYGQEWTYEQRKYVEFTCHTAFFVSIVVVQWADLIICKTRRNSVFQQGMKNKILIFGLFEET 936 (997)
T ss_pred ccccccccccccccccccccccccchhcccchhhhhhHHHHHHHHHHHHHHHHHhccCcccccccCCcCHHHHHHHHHHH
Confidence 000 000 00 00146789999998888777653 2222121 45677777888778
Q ss_pred HHHHHHhccCccccchhHHHHHHHhcCChHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 002029 866 IFLLAYGAMDPYISTTAYKVFIEACAPAPSFWLITLLVLMSSLLPYFTYSAIQMRF 921 (978)
Q Consensus 866 i~~~i~~~i~~~~~~~~~~~~~~~~~~s~~~wl~il~~~~~~ll~~~~~k~~~r~~ 921 (978)
+++++..++|+ ++. +|+..+.++..|+.+++++++.++..++.|+++|++
T Consensus 937 ~l~~~~~~~p~-~~~-----~f~~~~l~~~~w~~~~~~~~~~~~~~~~~k~~~r~~ 986 (997)
T TIGR01106 937 ALAAFLSYCPG-MGV-----ALRMYPLKPTWWFCAFPYSLLIFVYDEIRKLIIRRN 986 (997)
T ss_pred HHHHHHHHhhh-hHH-----HhccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 78877788874 344 677888999999999999999999999999988764
No 11
>TIGR01517 ATPase-IIB_Ca plasma-membrane calcium-translocating P-type ATPase. The calcium P-type ATPases have been characterized as Type IIB based on a phylogenetic analysis which distinguishes this group from the Type IIA SERCA calcium pump. A separate analysis divides Type IIA into sub-types (SERCA and PMR1), which are modelled by the corresponding TIGR01116 and TIGR01522. This model is well separated from the two others.
Probab=100.00 E-value=2.5e-87 Score=836.38 Aligned_cols=697 Identities=21% Similarity=0.269 Sum_probs=530.3
Q ss_pred eEE-EEEEC-----CccccC----CcCceeecCceeccCCeEEEEEEEeCccchh---ccccCCCCCCcCHHHHHHHHHH
Q 002029 26 FVG-SLELE-----EQQYPL----TPQQLLLRDSKLRNTDCIYGAVIFTGRDTKV---FQNSTGPPSKRSKVERRMDKII 92 (978)
Q Consensus 26 f~G-~~~~~-----~~~~pl----~~~n~l~~Gs~l~~tg~~~gvVv~tG~~Tki---~~~~~~~~~k~s~l~~~~n~~~ 92 (978)
.+| .+.+| ||+.|+ +.+|++|+||.+.+ |.+.|+|++||.+|.+ ..+...++ +++|+++.++++.
T Consensus 205 i~g~~l~VdES~LTGES~pv~K~~~~~n~v~~GT~v~~-G~~~~iV~~tG~~T~~gki~~~~~~~~-~~t~l~~~~~~~~ 282 (941)
T TIGR01517 205 ISGLSLEIDESSITGESDPIKKGAPKDSFLLSGTVVNE-GSGRMLVTAVGVNSFGGKLMMELRAEG-EDTPLQEKLSELA 282 (941)
T ss_pred EEcCcEEEEecccCCCCCcccccCCCCceEEeCCeEEe-eEEEEEEEEeCCCcHHHHHHHhhccCC-CCCcHHHHHHHHH
Confidence 356 55554 899987 34688999999997 9999999999999954 44444444 4579999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHhh-hccccccccccccccCCCCCCCcCCchhhHHHHHHHHHHHHHHHhccccchhhhhHHH
Q 002029 93 YFLFGILVLMSFIGSIFFGIA-TREDLQDGKMKRWYLRPDDTTAYYDPKRAAVAAVLHFLTALMLYGYLIPISLYVSIEI 171 (978)
Q Consensus 93 ~~~~~~~~~~~~i~~i~~~~~-~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~iP~sL~v~i~~ 171 (978)
..+..+.++++++.++++.+. .... .|.-.. .+......+...+.+++++++++||++||+++++
T Consensus 283 ~~~~~~~l~~~~i~~~~~~~~~~~~~-------~~~~~~-------~~~~~~~~~~~~~~~al~llv~~iP~~Lp~~vti 348 (941)
T TIGR01517 283 GLIGKFGMGSAVLLFLVLSLRYVFRI-------IRGDGR-------DTEEDAQTFLDHFIIAVTIVVVAVPEGLPLAVTI 348 (941)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhh-------cccccc-------ccchhhHHHHHHHHHHHHHHHhhCCCchHHHHHH
Confidence 998887777766665544221 1000 000000 0000112345578889999999999999999999
Q ss_pred HHHHHHHHHhhccccccccCCCcccccCcccccccccceEEEeeCCcccccCeeEEEEEEECCeeeCCCchHHHHHHHhh
Q 002029 172 VKILQSIFINQDLHMYYEETDKPARARTSNLNEELGQVDTILSDKTGTLTCNSMEFIKCSIAGTSYGRGVTEVERAMARR 251 (978)
Q Consensus 172 ~~~~~~~~i~~d~~m~~~~~~~~~~~r~~~~~e~Lg~v~~I~sDKTGTLT~n~m~~~~~~i~~~~y~~~~~~~~~~~~~~ 251 (978)
+...++. +| +++++++|+++++|+||++++||||||||||+|+|++++++.++..++.+..
T Consensus 349 ~l~~~~~------~m----ak~~ilvk~l~a~E~lg~v~~Ic~DKTGTLT~n~m~v~~~~~~~~~~~~~~~--------- 409 (941)
T TIGR01517 349 ALAYSMK------KM----MKDNNLVRHLAACETMGSATAICSDKTGTLTQNVMSVVQGYIGEQRFNVRDV--------- 409 (941)
T ss_pred HHHHHHH------HH----HhCCCEEechHHhhhccCceEEEEcCcCceeeceEEEEEEEEecceEecCcc---------
Confidence 9888877 67 8899999999999999999999999999999999999999876654432100
Q ss_pred cCCCCccchhhhhhcccccCCcccCchhhhcCCCCCCCChHHHHHHHHHHhhhcceeccccCCCCcEEEecCCccHHHHH
Q 002029 252 KGSPLEEEVTEEQEDKASIKGFNFEDERIMNGSWVNEPHADVIQKFLRLLAICHTALPEVDEENGKISYEAESPDEAAFV 331 (978)
Q Consensus 252 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~lalC~~~~~~~~~~~~~~~y~~~sp~E~Alv 331 (978)
.. ..++...+++...++||+..+...++.+ ..+..+||+|.||+
T Consensus 410 -----------------------------~~------~~~~~~~~~l~~~~~~~s~~~~~~~~~~-~~~~~g~p~e~All 453 (941)
T TIGR01517 410 -----------------------------LR------NVPKHVRNILVEGISLNSSSEEVVDRGG-KRAFIGSKTECALL 453 (941)
T ss_pred -----------------------------cc------cCCHHHHHHHHHHHHhCCCCccccCCCC-ccccCCCccHHHHH
Confidence 00 0012234455555556555443211111 12456899999999
Q ss_pred HHHHHcCCEEEeecCceeEEEecCCCCCccceeEeeEeEeecCCCCCceEEEEEEeCCCeEEEEEeCCchHHHHHhccc-
Q 002029 332 IAARELGFEFYERTQTSISVHELDPVTGTKVERSYSLLNVLEFSSSRKRMSVIVRSEEGTLLLLSKGADSVMFERLAEN- 410 (978)
Q Consensus 332 ~~a~~~g~~~~~r~~~~~~i~~~~~~~~~~~~~~~~il~~~~F~s~rkrmsviv~~~~~~~~l~~KGa~~~i~~~~~~~- 410 (978)
+++++.|..... .+..|++++.+||+|+||||+++++.+++++++++|||||.|+++|+..
T Consensus 454 ~~~~~~~~~~~~------------------~~~~~~~~~~~pF~s~~k~msvv~~~~~~~~~~~~KGA~e~il~~c~~~~ 515 (941)
T TIGR01517 454 GFLLLLGRDYQE------------------VRAEEKVVKIYPFNSERKFMSVVVKHSGGKVREFRKGASEIVLKPCRKRL 515 (941)
T ss_pred HHHHHcCCCHHH------------------HHhhchhccccccCCCCCeEEEEEEeCCCcEEEEEECChHHHHHhhhHHh
Confidence 999987743211 1245778899999999999999999877889999999999999999752
Q ss_pred ---ch-----hhHHHHHHHHHHHHHccceeEeeEEEeCCHHHHHHHHHHHHHHhhcccccHHHHHHHHHHHhhcccEEEE
Q 002029 411 ---GR-----EFEEQTKEHINEYADAGLRTLILAYRELDEKEYKQFNEEFTEAKNSVSADREELAEEIAEKIEKNLILLG 482 (978)
Q Consensus 411 ---~~-----~~~~~~~~~l~~~a~~Glr~l~~A~r~l~~~e~~~~~~~~~~a~~~l~~~r~~~~~~~~~~ie~dl~llG 482 (978)
+. +.++++.+.+++++.+|+||+++|||.++.+++..| +..|+||+|+|
T Consensus 516 ~~~g~~~~~~~~~~~i~~~~~~~a~~G~Rvl~~A~~~~~~~~~~~~-----------------------~~~e~~l~~lG 572 (941)
T TIGR01517 516 DSNGEATPISDDKDRCADVIEPLASDALRTICLAYRDFAPEEFPRK-----------------------DYPNGGLTLIG 572 (941)
T ss_pred hcCCCcccCcHHHHHHHHHHHHHHhcCCEEEEEEEEecCccccccc-----------------------cccccCcEEEE
Confidence 11 135678889999999999999999999876543221 23478999999
Q ss_pred EEeeccccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCccccCceEEEEecCCCcccccchhhhHHHHHHHHH
Q 002029 483 ATAVEDKLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQGMRQVIISSETPESKTLEKSEDKSAAAAALK 562 (978)
Q Consensus 483 ~i~ieD~lr~~v~~~I~~L~~aGIkv~mlTGD~~~tA~~ia~~~gl~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~ 562 (978)
+++++||+|++++++|++|+++||++||+|||+..||.+||++|||..++.
T Consensus 573 li~~~Dplr~~~~~aI~~l~~aGI~v~miTGD~~~tA~~iA~~~GI~~~~~----------------------------- 623 (941)
T TIGR01517 573 VVGIKDPLRPGVREAVQECQRAGITVRMVTGDNIDTAKAIARNCGILTFGG----------------------------- 623 (941)
T ss_pred EeeccCCCchhHHHHHHHHHHCCCEEEEECCCChHHHHHHHHHcCCCCCCc-----------------------------
Confidence 999999999999999999999999999999999999999999999976432
Q ss_pred HHHHHHHHhhhhhhccccCCCCCeEEEEcCchhhhhchhhHHHHHHHHHhccCeeEEEeCCchhHHHHHHHHHccCCCeE
Q 002029 563 ASVLHQLIRGKELLDSSNESLGPLALIIDGKSLTYALEDDVKDLFLELAIGCASVICCRSSPKQKALVTRLVKTKTSSTT 642 (978)
Q Consensus 563 ~~~~~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~f~~l~~~~~~vi~~r~sP~qK~~iV~~lk~~~~~~v 642 (978)
.+++|++++.+.++++.+... +..||||++|+||.++|+.+|+ .|++|
T Consensus 624 -------------------------~vi~G~~~~~l~~~el~~~i~------~~~Vfar~sPe~K~~iV~~lq~-~g~vV 671 (941)
T TIGR01517 624 -------------------------LAMEGKEFRRLVYEEMDPILP------KLRVLARSSPLDKQLLVLMLKD-MGEVV 671 (941)
T ss_pred -------------------------eEeeHHHhhhCCHHHHHHHhc------cCeEEEECCHHHHHHHHHHHHH-CCCEE
Confidence 277788777766655555433 4469999999999999999998 89999
Q ss_pred EEEcCCcCCHHHhhhcccccccc--CCccchhccccceehhc--hhhhHHHHHHhhhhhhhHhhHhHHHHHHHHHHHHHH
Q 002029 643 LAIGDGANDVGMLQEADIGVGIS--GVEGMQAVMSSDIAIAQ--FRFLERLLLVHGHWCYRRISSMICYFFYKNIAFGFT 718 (978)
Q Consensus 643 ~aiGDG~ND~~ml~~AdvGI~i~--g~e~~~a~~asD~vi~~--f~~l~~lll~~gR~~~~~i~~~i~~~~~~n~~~~~~ 718 (978)
+|+|||+||+|||++|||||+|+ |++. |+++||+++.+ |+.+.++ +.|||++|+|+++++.|.+++|+..+++
T Consensus 672 am~GDGvNDapALk~AdVGIAmg~~gtdv--Ak~aADivL~dd~f~~I~~~-i~~gR~~~~ni~k~i~~~l~~n~~~i~~ 748 (941)
T TIGR01517 672 AVTGDGTNDAPALKLADVGFSMGISGTEV--AKEASDIILLDDNFASIVRA-VKWGRNVYDNIRKFLQFQLTVNVVAVIL 748 (941)
T ss_pred EEECCCCchHHHHHhCCcceecCCCccHH--HHHhCCEEEecCCHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999884 5666 89999999995 7779999 7999999999999999999999999999
Q ss_pred HHHHHHhhccccccchhhHHHHHHHHHHhhhhHhhhhccccCCChHHhhhCccchhcccccccccHHHHHHHHHHHHHHH
Q 002029 719 LFFFEAYASFSGQPVYNDWFLSLYNVFFTSLPVIALGVFDQDVSARFCLKFPLLYQEGVQNILFSWTRILGWALNGVANA 798 (978)
Q Consensus 719 ~~~~~~~~~~s~~~~~~~~~~~~~n~i~~~~p~~~l~~~~~~~~~~~~~~~P~ly~~~~~~~~~~~~~~~~~~~~~~~~s 798 (978)
.+++.++. +.++++++|++|+|++++++|+++++.+ ++++.++++|+. .+..++++..++..|++.|++++
T Consensus 749 ~~~~~~~~---~~~pl~~~qil~inl~~d~~~al~l~~e---~~~~~lm~~~P~---~~~~~li~~~~~~~i~~~~~~~~ 819 (941)
T TIGR01517 749 TFVGSCIS---STSPLTAVQLLWVNLIMDTLAALALATE---PPTEALLDRKPI---GRNAPLISRSMWKNILGQAGYQL 819 (941)
T ss_pred HHHHHHHh---ccccHHHHHHHHHHHHHHHhhHHHHccC---CccHHHHhCCCC---CCCCCcCCHHHHHHHHHHHHHHH
Confidence 88887775 4457999999999999999999999864 344455555542 56678899999999999999999
Q ss_pred HHHHHHHHHhhccccccCCC----ceehhhHHHHHHHHHHHHHHHHHHHHh-hcc----h-hhHHHHHHHHHHHHHHHHH
Q 002029 799 AIIFFFCIHAMKQQAFRKGG----EVIGLEILGTTMYTCVVWVVNCQMALS-VTY----F-TYIQHLFIWGGITFWYIFL 868 (978)
Q Consensus 799 ~~~~~~~~~~~~~~~~~~~g----~~~~~~~~~~~~f~~~v~~~~~~~~~~-~~~----~-~~~~~~~i~~si~~~~i~~ 868 (978)
++.|+++++... .+...+ .........|++|.++++.+.++.+.. +.+ | .++.|.++|.++++.++++
T Consensus 820 ~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~t~~f~~~v~~~~~~~~~~r~~~~~~~~~~~~~n~~~~~~~~~~~~l~ 897 (941)
T TIGR01517 820 VVTFILLFAGGS--IFDVSGPDEITSHQQGELNTIVFNTFVLLQLFNEINARKLYERNVFEGLFKNRIFVTIMGFTFGFQ 897 (941)
T ss_pred HHHHHHHHHHHh--hhcccCcccccccccchhhHHHHHHHHHHHHHHHHHHccCCcccccccccccHHHHHHHHHHHHHH
Confidence 988877654321 111111 000123456888988888877776432 111 1 2346677777777777777
Q ss_pred HHHhccCccccchhHHHHHHHhcCChHHHHHHHHHHHHHHHHHHHHHHH
Q 002029 869 LAYGAMDPYISTTAYKVFIEACAPAPSFWLITLLVLMSSLLPYFTYSAI 917 (978)
Q Consensus 869 ~i~~~i~~~~~~~~~~~~~~~~~~s~~~wl~il~~~~~~ll~~~~~k~~ 917 (978)
+++..+ ++. +|+..+.++..|+.+++++++.++..++.|++
T Consensus 898 ~~~~~~---~~~-----~f~~~~l~~~~w~~~~~~~~~~~~~~~~~~~~ 938 (941)
T TIGR01517 898 VIIVEF---GGS-----FFSTVSLSIEQWIGCVLLGMLSLIFGVLLRLI 938 (941)
T ss_pred HHHHHH---HHH-----HhcccCCCHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 655532 232 66788899999999999998888888888775
No 12
>TIGR01522 ATPase-IIA2_Ca golgi membrane calcium-translocating P-type ATPase. The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1 the former of which is modelled by TIGR01116.
Probab=100.00 E-value=1.7e-83 Score=797.25 Aligned_cols=663 Identities=19% Similarity=0.223 Sum_probs=519.3
Q ss_pred ceeecCceeccCCeEEEEEEEeCccchhcc---ccCCCCCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccc
Q 002029 43 QLLLRDSKLRNTDCIYGAVIFTGRDTKVFQ---NSTGPPSKRSKVERRMDKIIYFLFGILVLMSFIGSIFFGIATREDLQ 119 (978)
Q Consensus 43 n~l~~Gs~l~~tg~~~gvVv~tG~~Tki~~---~~~~~~~k~s~l~~~~n~~~~~~~~~~~~~~~i~~i~~~~~~~~~~~ 119 (978)
|++|+||.+.+ |.+.++|++||.+|.+++ ....+...++|+++.++++..++.++.++++++.+++. ++.+.
T Consensus 195 n~v~~GT~v~~-G~~~~~V~~tG~~T~~gki~~~v~~~~~~kt~lq~~l~~l~~~~~~~~~~~~~~~~~~~-~~~~~--- 269 (884)
T TIGR01522 195 NIAFMGTLVRC-GHGKGIVVGTGSNTEFGAVFKMMQAIEKPKTPLQKSMDLLGKQLSLVSFGVIGVICLVG-WFQGK--- 269 (884)
T ss_pred ceEEeCCEEEe-eeEEEEEEEecCccHHHHHHHHhccCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHhcC---
Confidence 69999999997 999999999999996643 34455566799999999999988776655554443332 12111
Q ss_pred cccccccccCCCCCCCcCCchhhHHHHHHHHHHHHHHHhccccchhhhhHHHHHHHHHHHHhhccccccccCCCcccccC
Q 002029 120 DGKMKRWYLRPDDTTAYYDPKRAAVAAVLHFLTALMLYGYLIPISLYVSIEIVKILQSIFINQDLHMYYEETDKPARART 199 (978)
Q Consensus 120 ~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~iP~sL~v~i~~~~~~~~~~i~~d~~m~~~~~~~~~~~r~ 199 (978)
.| ...+..++++++.+||++||++++++...++. +| +++++++|+
T Consensus 270 -----~~--------------------~~~~~~~v~llv~aiP~~Lp~~vt~~l~~~~~------r~----ak~~ilvk~ 314 (884)
T TIGR01522 270 -----DW--------------------LEMFTISVSLAVAAIPEGLPIIVTVTLALGVL------RM----SKKRAIVRK 314 (884)
T ss_pred -----CH--------------------HHHHHHHHHHHHHHccchHHHHHHHHHHHHHH------HH----hhcCCcccc
Confidence 12 22677888999999999999999999988887 67 899999999
Q ss_pred cccccccccceEEEeeCCcccccCeeEEEEEEECCeeeCC-CchHHHHHHHhhcCCCCccchhhhhhcccccCCcccCch
Q 002029 200 SNLNEELGQVDTILSDKTGTLTCNSMEFIKCSIAGTSYGR-GVTEVERAMARRKGSPLEEEVTEEQEDKASIKGFNFEDE 278 (978)
Q Consensus 200 ~~~~e~Lg~v~~I~sDKTGTLT~n~m~~~~~~i~~~~y~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 278 (978)
++++|+||++++||||||||||+|+|++.+++..+..+.. +... .+ .......+++
T Consensus 315 ~~a~E~Lg~v~~Ic~DKTGTLT~n~m~v~~i~~~~~~~~~~~~~~------------~~-----------~~~~~~~~~~ 371 (884)
T TIGR01522 315 LPSVETLGSVNVICSDKTGTLTKNHMTVTKIWTSDGLHTMLNAVS------------LN-----------QFGEVIVDGD 371 (884)
T ss_pred hHHHHhccCccEEEecCccccccCeEEEEEEEecCceEeeccCCc------------cC-----------CCCccccccc
Confidence 9999999999999999999999999999999876543210 0000 00 0000000000
Q ss_pred hhhcCCCCCCCChHHHHHHHHHHhhhcceeccccCCCCcEEEecCCccHHHHHHHHHHcCCEEEeecCceeEEEecCCCC
Q 002029 279 RIMNGSWVNEPHADVIQKFLRLLAICHTALPEVDEENGKISYEAESPDEAAFVIAARELGFEFYERTQTSISVHELDPVT 358 (978)
Q Consensus 279 ~l~~~~~~~~~~~~~~~~~~~~lalC~~~~~~~~~~~~~~~y~~~sp~E~Alv~~a~~~g~~~~~r~~~~~~i~~~~~~~ 358 (978)
......++...+++.+.++||+...+..+ +. ..+||+|.||++++++.|+...
T Consensus 372 ------~~~~~~~~~~~~~l~~~~l~~~~~~~~~~--~~---~~g~p~e~All~~~~~~~~~~~---------------- 424 (884)
T TIGR01522 372 ------VLHGFYTVAVSRILEAGNLCNNAKFRNEA--DT---LLGNPTDVALIELLMKFGLDDL---------------- 424 (884)
T ss_pred ------ccccccCHHHHHHHHHHhhhCCCeecCCC--CC---cCCChHHHHHHHHHHHcCcHhH----------------
Confidence 00111234567888899999998654322 11 1369999999999998876311
Q ss_pred CccceeEeeEeEeecCCCCCceEEEEEEeC-CCeEEEEEeCCchHHHHHhccc----------chhhHHHHHHHHHHHHH
Q 002029 359 GTKVERSYSLLNVLEFSSSRKRMSVIVRSE-EGTLLLLSKGADSVMFERLAEN----------GREFEEQTKEHINEYAD 427 (978)
Q Consensus 359 ~~~~~~~~~il~~~~F~s~rkrmsviv~~~-~~~~~l~~KGa~~~i~~~~~~~----------~~~~~~~~~~~l~~~a~ 427 (978)
+..|+.+..+||+|+||||+++++.+ ++++++|+|||||.|+++|+.. +++.++++.+++++++.
T Consensus 425 ----~~~~~~~~~~pF~s~~k~m~v~~~~~~~~~~~~~~KGape~il~~c~~~~~~~g~~~~l~~~~~~~i~~~~~~~a~ 500 (884)
T TIGR01522 425 ----RETYIRVAEVPFSSERKWMAVKCVHRQDRSEMCFMKGAYEQVLKYCTYYQKKDGKTLTLTQQQRDVIQEEAAEMAS 500 (884)
T ss_pred ----HhhCcEEeEeCCCCCCCeEEEEEEEcCCCeEEEEEeCChHHHHHhhhhhhhcCCCeeeCCHHHHHHHHHHHHHHHh
Confidence 24578889999999999999999874 5678999999999999999742 12345677888999999
Q ss_pred ccceeEeeEEEeCCHHHHHHHHHHHHHHhhcccccHHHHHHHHHHHhhcccEEEEEEeeccccCCChHHHHHHHHHcCCe
Q 002029 428 AGLRTLILAYRELDEKEYKQFNEEFTEAKNSVSADREELAEEIAEKIEKNLILLGATAVEDKLQNGVPECIDKLAQAGIK 507 (978)
Q Consensus 428 ~Glr~l~~A~r~l~~~e~~~~~~~~~~a~~~l~~~r~~~~~~~~~~ie~dl~llG~i~ieD~lr~~v~~~I~~L~~aGIk 507 (978)
+|+||+++|||.+ ++||+|+|+++++||+|++++++|+.|+++||+
T Consensus 501 ~G~rvl~~A~~~~----------------------------------~~~l~~lGli~l~Dp~r~~~~~~i~~l~~~Gi~ 546 (884)
T TIGR01522 501 AGLRVIAFASGPE----------------------------------KGQLTFLGLVGINDPPRPGVKEAVTTLITGGVR 546 (884)
T ss_pred cCCEEEEEEEEcC----------------------------------CCCeEEEEEEeccCcchhHHHHHHHHHHHCCCe
Confidence 9999999999875 258999999999999999999999999999999
Q ss_pred EEEEcCCChhhHHHHHHHcCccccCceEEEEecCCCcccccchhhhHHHHHHHHHHHHHHHHHhhhhhhccccCCCCCeE
Q 002029 508 LWVLTGDKMETAINIGFACSLLRQGMRQVIISSETPESKTLEKSEDKSAAAAALKASVLHQLIRGKELLDSSNESLGPLA 587 (978)
Q Consensus 508 v~mlTGD~~~tA~~ia~~~gl~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 587 (978)
++|+|||+.+||.++|+++|+......
T Consensus 547 v~miTGD~~~tA~~ia~~~Gi~~~~~~----------------------------------------------------- 573 (884)
T TIGR01522 547 IIMITGDSQETAVSIARRLGMPSKTSQ----------------------------------------------------- 573 (884)
T ss_pred EEEECCCCHHHHHHHHHHcCCCCCCCc-----------------------------------------------------
Confidence 999999999999999999999754321
Q ss_pred EEEcCchhhhhchhhHHHHHHHHHhccCeeEEEeCCchhHHHHHHHHHccCCCeEEEEcCCcCCHHHhhhcccccccc--
Q 002029 588 LIIDGKSLTYALEDDVKDLFLELAIGCASVICCRSSPKQKALVTRLVKTKTSSTTLAIGDGANDVGMLQEADIGVGIS-- 665 (978)
Q Consensus 588 lvi~G~~l~~~~~~~~~~~f~~l~~~~~~vi~~r~sP~qK~~iV~~lk~~~~~~v~aiGDG~ND~~ml~~AdvGI~i~-- 665 (978)
+++|++++.+.++++.+... +..||||++|+||..+|+.+|+ .|++|+|+|||.||+||+++|||||+++
T Consensus 574 -~v~g~~l~~~~~~~l~~~~~------~~~Vfar~~P~~K~~iv~~lq~-~g~~v~mvGDGvND~pAl~~AdVGia~g~~ 645 (884)
T TIGR01522 574 -SVSGEKLDAMDDQQLSQIVP------KVAVFARASPEHKMKIVKALQK-RGDVVAMTGDGVNDAPALKLADIGVAMGQT 645 (884)
T ss_pred -eeEhHHhHhCCHHHHHHHhh------cCeEEEECCHHHHHHHHHHHHH-CCCEEEEECCCcccHHHHHhCCeeEecCCC
Confidence 45677776655555544433 4569999999999999999998 8999999999999999999999999994
Q ss_pred CCccchhccccceehhc--hhhhHHHHHHhhhhhhhHhhHhHHHHHHHHHHHHHHHHHHHHhhccccccchhhHHHHHHH
Q 002029 666 GVEGMQAVMSSDIAIAQ--FRFLERLLLVHGHWCYRRISSMICYFFYKNIAFGFTLFFFEAYASFSGQPVYNDWFLSLYN 743 (978)
Q Consensus 666 g~e~~~a~~asD~vi~~--f~~l~~lll~~gR~~~~~i~~~i~~~~~~n~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~n 743 (978)
|++. |+.+||+++.+ |..+..+ +.+||.+|+|+++++.|.++.|+..+++.+++.++. ...+++++|++|+|
T Consensus 646 g~~v--a~~aaDivl~dd~~~~i~~~-i~~gR~~~~ni~k~i~~~l~~ni~~~~~~~~~~~~~---~~~pl~~~qiL~in 719 (884)
T TIGR01522 646 GTDV--AKEAADMILTDDDFATILSA-IEEGKGIFNNIKNFITFQLSTSVAALSLIALATLMG---FPNPLNAMQILWIN 719 (884)
T ss_pred cCHH--HHHhcCEEEcCCCHHHHHHH-HHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHc---CCCchhHHHHHHHH
Confidence 3333 77899999987 6668888 899999999999999999999999888877766653 44579999999999
Q ss_pred HHHhhhhHhhhhccccCCChHHhhhCccchhcccccccccHHHHHHHHHHHHHHHHHHHHHHHHhhccccccCCCceehh
Q 002029 744 VFFTSLPVIALGVFDQDVSARFCLKFPLLYQEGVQNILFSWTRILGWALNGVANAAIIFFFCIHAMKQQAFRKGGEVIGL 823 (978)
Q Consensus 744 ~i~~~~p~~~l~~~~~~~~~~~~~~~P~ly~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~g~~~~~ 823 (978)
++++.+|+++++.++ ++++.+.++|+ .++++++++.++..+++.|++++++.++++++.+.. +. ..
T Consensus 720 l~~d~~~a~~l~~e~--~~~~~m~~~P~----~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~------~~--~~ 785 (884)
T TIGR01522 720 ILMDGPPAQSLGVEP--VDKDVMRKPPR----PRNDKILTKDLIKKILVSAIIIVVGTLFVFVREMQD------GV--IT 785 (884)
T ss_pred HHHHhhHHHHhccCC--CChhHhhCCCC----CCCCCccCHHHHHHHHHHHHHHHHHHHHHHHHHHcC------Cc--ch
Confidence 999999999999843 55666666665 577899999999999999999998877665543221 11 11
Q ss_pred hHHHHHHHHHHHHHHHHHHHHhhcc--hh-----hHHHHHHHHHHHHHHHHHHHHhccCccccchhHHHHHHHhcCChHH
Q 002029 824 EILGTTMYTCVVWVVNCQMALSVTY--FT-----YIQHLFIWGGITFWYIFLLAYGAMDPYISTTAYKVFIEACAPAPSF 896 (978)
Q Consensus 824 ~~~~~~~f~~~v~~~~~~~~~~~~~--~~-----~~~~~~i~~si~~~~i~~~i~~~i~~~~~~~~~~~~~~~~~~s~~~ 896 (978)
....|++|.++++.+.++.+. .|+ .+ ++.|.++|+++++.+++++++.++|. ++. +|+..+.++..
T Consensus 786 ~~~~t~~f~~~v~~q~~~~~~-~r~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~p~-~~~-----~f~~~~l~~~~ 858 (884)
T TIGR01522 786 ARDTTMTFTCFVFFDMFNALA-CRSQTKSVFEIGFFSNRMFNYAVGGSIIGQLLVIYFPP-LQS-----VFQTEALSIKD 858 (884)
T ss_pred hhHHHHHHHHHHHHHHHHHHH-HccCCccccccCcccCHHHHHHHHHHHHHHHHHHHHHH-HHH-----HHcCCCCCHHH
Confidence 234688888888877776643 222 22 34678889999998999988888884 343 67788999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhh
Q 002029 897 WLITLLVLMSSLLPYFTYSAIQMRF 921 (978)
Q Consensus 897 wl~il~~~~~~ll~~~~~k~~~r~~ 921 (978)
|+.+++++++.++..++.|+++|.+
T Consensus 859 w~~~~~~~~~~~~~~~~~k~~~~~~ 883 (884)
T TIGR01522 859 LLFLLLITSSVCIVDEIRKKVERSR 883 (884)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhc
Confidence 9999999999999999999988753
No 13
>PRK15122 magnesium-transporting ATPase; Provisional
Probab=100.00 E-value=9.3e-82 Score=776.72 Aligned_cols=637 Identities=17% Similarity=0.191 Sum_probs=482.2
Q ss_pred CceeecCceeccCCeEEEEEEEeCccchhccc---cCCCCCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccc
Q 002029 42 QQLLLRDSKLRNTDCIYGAVIFTGRDTKVFQN---STGPPSKRSKVERRMDKIIYFLFGILVLMSFIGSIFFGIATREDL 118 (978)
Q Consensus 42 ~n~l~~Gs~l~~tg~~~gvVv~tG~~Tki~~~---~~~~~~k~s~l~~~~n~~~~~~~~~~~~~~~i~~i~~~~~~~~~~ 118 (978)
+|++|+||.+.+ |.+.++|++||.+|++.+. ... +...+++++.++++...+..+.++++.+..++..+. ..
T Consensus 240 ~n~vfaGT~V~~-G~~~~~V~atG~~T~~gkI~~~v~~-~~~~t~l~~~l~~i~~~l~~~~~~~~~~v~~~~~~~-~~-- 314 (903)
T PRK15122 240 PNICFMGTNVVS-GTATAVVVATGSRTYFGSLAKSIVG-TRAQTAFDRGVNSVSWLLIRFMLVMVPVVLLINGFT-KG-- 314 (903)
T ss_pred cceEEeCCEEEe-eeEEEEEEEeccccHhhHHHHHhcC-CCCCCcHHHHHHHHHHHHHHHHHHHHHHhhhhhhhc-cC--
Confidence 389999999998 9999999999999976333 333 445689999999999888776666655543332221 10
Q ss_pred ccccccccccCCCCCCCcCCchhhHHHHHHHHHHHHHHHhccccchhhhhHHHHHHHHHHHHhhccccccccCCCccccc
Q 002029 119 QDGKMKRWYLRPDDTTAYYDPKRAAVAAVLHFLTALMLYGYLIPISLYVSIEIVKILQSIFINQDLHMYYEETDKPARAR 198 (978)
Q Consensus 119 ~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~iP~sL~v~i~~~~~~~~~~i~~d~~m~~~~~~~~~~~r 198 (978)
.| ...+..++++++.+||++||++++++...++. +| +++++++|
T Consensus 315 ------~~--------------------~~~l~~aisl~V~~~Pe~Lp~~vt~~La~g~~------~m----ak~~ilVk 358 (903)
T PRK15122 315 ------DW--------------------LEALLFALAVAVGLTPEMLPMIVSSNLAKGAI------AM----ARRKVVVK 358 (903)
T ss_pred ------CH--------------------HHHHHHHHHHHHHHccchHHHHHHHHHHHHHH------HH----HHcCCeec
Confidence 11 22677889999999999999999998888887 66 88999999
Q ss_pred CcccccccccceEEEeeCCcccccCeeEEEEEEECCeeeCCCchHHHHHHHhhcCCCCccchhhhhhcccccCCcccCch
Q 002029 199 TSNLNEELGQVDTILSDKTGTLTCNSMEFIKCSIAGTSYGRGVTEVERAMARRKGSPLEEEVTEEQEDKASIKGFNFEDE 278 (978)
Q Consensus 199 ~~~~~e~Lg~v~~I~sDKTGTLT~n~m~~~~~~i~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 278 (978)
+++++|+||++++||||||||||+|+|++.+++..+..
T Consensus 359 ~l~avE~Lg~v~vIc~DKTGTLT~~~m~V~~~~~~~~~------------------------------------------ 396 (903)
T PRK15122 359 RLNAIQNFGAMDVLCTDKTGTLTQDRIILEHHLDVSGR------------------------------------------ 396 (903)
T ss_pred ccchhhhhcCCcEEEecCCcccccCeEEEEEEEcCCCC------------------------------------------
Confidence 99999999999999999999999999999987521100
Q ss_pred hhhcCCCCCCCChHHHHHHHHHHhhhcceeccccCCCCcEEEecCCccHHHHHHHHHHcCCEEEeecCceeEEEecCCCC
Q 002029 279 RIMNGSWVNEPHADVIQKFLRLLAICHTALPEVDEENGKISYEAESPDEAAFVIAARELGFEFYERTQTSISVHELDPVT 358 (978)
Q Consensus 279 ~l~~~~~~~~~~~~~~~~~~~~lalC~~~~~~~~~~~~~~~y~~~sp~E~Alv~~a~~~g~~~~~r~~~~~~i~~~~~~~ 358 (978)
.. ++++...++|+.. + . ..+||.|.|+++++.+.|....
T Consensus 397 -----------~~---~~~l~~a~l~s~~--~--~-------~~~~p~e~All~~a~~~~~~~~---------------- 435 (903)
T PRK15122 397 -----------KD---ERVLQLAWLNSFH--Q--S-------GMKNLMDQAVVAFAEGNPEIVK---------------- 435 (903)
T ss_pred -----------Ch---HHHHHHHHHhCCC--C--C-------CCCChHHHHHHHHHHHcCchhh----------------
Confidence 00 1233333333211 0 0 1369999999999988764210
Q ss_pred CccceeEeeEeEeecCCCCCceEEEEEEeCCCeEEEEEeCCchHHHHHhccc---------chhhHHHHHHHHHHHHHcc
Q 002029 359 GTKVERSYSLLNVLEFSSSRKRMSVIVRSEEGTLLLLSKGADSVMFERLAEN---------GREFEEQTKEHINEYADAG 429 (978)
Q Consensus 359 ~~~~~~~~~il~~~~F~s~rkrmsviv~~~~~~~~l~~KGa~~~i~~~~~~~---------~~~~~~~~~~~l~~~a~~G 429 (978)
...|+.+..+||+|.||||+++++.++|++++++|||++.|+++|+.. +++.++++.+.+++++.+|
T Consensus 436 ----~~~~~~~~~~pF~s~~k~ms~v~~~~~~~~~~~~KGa~e~il~~c~~~~~~~~~~~l~~~~~~~i~~~~~~~a~~G 511 (903)
T PRK15122 436 ----PAGYRKVDELPFDFVRRRLSVVVEDAQGQHLLICKGAVEEMLAVATHVRDGDTVRPLDEARRERLLALAEAYNADG 511 (903)
T ss_pred ----hhcCceEEEeeeCCCcCEEEEEEEcCCCcEEEEECCcHHHHHHhchhhhcCCCeecCCHHHHHHHHHHHHHHHhCC
Confidence 145777889999999999999999877889999999999999999742 2234566778889999999
Q ss_pred ceeEeeEEEeCCHHHHHHHHHHHHHHhhcccccHHHHHHHHHHHhhcccEEEEEEeeccccCCChHHHHHHHHHcCCeEE
Q 002029 430 LRTLILAYRELDEKEYKQFNEEFTEAKNSVSADREELAEEIAEKIEKNLILLGATAVEDKLQNGVPECIDKLAQAGIKLW 509 (978)
Q Consensus 430 lr~l~~A~r~l~~~e~~~~~~~~~~a~~~l~~~r~~~~~~~~~~ie~dl~llG~i~ieD~lr~~v~~~I~~L~~aGIkv~ 509 (978)
+|++++|||+++.++..++ ..+..|+||+|+|+++++||+|++++++|++|+++||+++
T Consensus 512 ~rvlavA~k~~~~~~~~~~---------------------~~~~~e~~l~~lGli~l~Dp~R~~a~~aI~~l~~aGI~v~ 570 (903)
T PRK15122 512 FRVLLVATREIPGGESRAQ---------------------YSTADERDLVIRGFLTFLDPPKESAAPAIAALRENGVAVK 570 (903)
T ss_pred CEEEEEEEeccCccccccc---------------------cccccccCcEEEEEEeccCccHHHHHHHHHHHHHCCCeEE
Confidence 9999999999876432110 0123478999999999999999999999999999999999
Q ss_pred EEcCCChhhHHHHHHHcCccccCceEEEEecCCCcccccchhhhHHHHHHHHHHHHHHHHHhhhhhhccccCCCCCeEEE
Q 002029 510 VLTGDKMETAINIGFACSLLRQGMRQVIISSETPESKTLEKSEDKSAAAAALKASVLHQLIRGKELLDSSNESLGPLALI 589 (978)
Q Consensus 510 mlTGD~~~tA~~ia~~~gl~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv 589 (978)
|+|||+..||.+||+++||..+. +
T Consensus 571 miTGD~~~tA~aIA~~lGI~~~~--------------------------------------------------------v 594 (903)
T PRK15122 571 VLTGDNPIVTAKICREVGLEPGE--------------------------------------------------------P 594 (903)
T ss_pred EECCCCHHHHHHHHHHcCCCCCC--------------------------------------------------------c
Confidence 99999999999999999994211 6
Q ss_pred EcCchhhhhchhhHHHHHHHHHhccCeeEEEeCCchhHHHHHHHHHccCCCeEEEEcCCcCCHHHhhhcccccccc-CCc
Q 002029 590 IDGKSLTYALEDDVKDLFLELAIGCASVICCRSSPKQKALVTRLVKTKTSSTTLAIGDGANDVGMLQEADIGVGIS-GVE 668 (978)
Q Consensus 590 i~G~~l~~~~~~~~~~~f~~l~~~~~~vi~~r~sP~qK~~iV~~lk~~~~~~v~aiGDG~ND~~ml~~AdvGI~i~-g~e 668 (978)
++|.+++.+.++++.+... +..||||++|+||.++|+.+|+ .|++|+|+|||+||+|||++|||||+|. |++
T Consensus 595 i~G~el~~~~~~el~~~v~------~~~VfAr~sPe~K~~iV~~Lq~-~G~vVamtGDGvNDaPALk~ADVGIAmg~gtd 667 (903)
T PRK15122 595 LLGTEIEAMDDAALAREVE------ERTVFAKLTPLQKSRVLKALQA-NGHTVGFLGDGINDAPALRDADVGISVDSGAD 667 (903)
T ss_pred cchHhhhhCCHHHHHHHhh------hCCEEEEeCHHHHHHHHHHHHh-CCCEEEEECCCchhHHHHHhCCEEEEeCcccH
Confidence 7788887766655555443 2349999999999999999998 8999999999999999999999999995 444
Q ss_pred cchhccccceehhc--hhhhHHHHHHhhhhhhhHhhHhHHHHHHHHHHHHHHHHHHHHhhccccccchhhHHHHHHHHHH
Q 002029 669 GMQAVMSSDIAIAQ--FRFLERLLLVHGHWCYRRISSMICYFFYKNIAFGFTLFFFEAYASFSGQPVYNDWFLSLYNVFF 746 (978)
Q Consensus 669 ~~~a~~asD~vi~~--f~~l~~lll~~gR~~~~~i~~~i~~~~~~n~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~n~i~ 746 (978)
. |+++||+++.+ |..+..+ +.+||.+|+|+++++.|.+..|+..++..++..++. +..++.+.|++|.|+++
T Consensus 668 v--AkeaADiVLldd~f~~Iv~a-i~~gR~i~~nI~k~i~~~ls~n~~~~~~~~~~~~~~---~~~pl~~~qil~~nli~ 741 (903)
T PRK15122 668 I--AKESADIILLEKSLMVLEEG-VIKGRETFGNIIKYLNMTASSNFGNVFSVLVASAFI---PFLPMLAIHLLLQNLMY 741 (903)
T ss_pred H--HHHhcCEEEecCChHHHHHH-HHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHh---ccchhHHHHHHHHHHHH
Confidence 4 89999999997 5558888 899999999999999999999998888777665553 33568999999999999
Q ss_pred hhhhHhhhhccccCCChHHhhhCccchhcccccccccHHHHHHHHHHHHHHHHHHHHHHHHhhccccccCCCceehhhHH
Q 002029 747 TSLPVIALGVFDQDVSARFCLKFPLLYQEGVQNILFSWTRILGWALNGVANAAIIFFFCIHAMKQQAFRKGGEVIGLEIL 826 (978)
Q Consensus 747 ~~~p~~~l~~~~~~~~~~~~~~~P~ly~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 826 (978)
+ +|+++++.++ ++++.+ +.|+ .++.+++++.+++ ..+.+.+.+++.|++.++.+.. |.......+
T Consensus 742 D-~~~lal~~d~--~~~~~m-~~P~----~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~ 806 (903)
T PRK15122 742 D-ISQLSLPWDK--MDKEFL-RKPR----KWDAKNIGRFMLW-IGPTSSIFDITTFALMWFVFAA------NSVEMQALF 806 (903)
T ss_pred H-HHHHhhcCCC--CCHhhc-CCCC----CCChhhhHHHHHH-HHHHHHHHHHHHHHHHHHHhcc------CcHhhhhhh
Confidence 9 4999998753 455555 7776 5667777775543 2223333344444433322211 100000124
Q ss_pred HHHHHHHHHHHHHHHHHHhhcch--hhHHHHHHHHHHHHHHHHHHHHhccCc-cccchhHHHHHHHhcCChHHHHHHHHH
Q 002029 827 GTTMYTCVVWVVNCQMALSVTYF--TYIQHLFIWGGITFWYIFLLAYGAMDP-YISTTAYKVFIEACAPAPSFWLITLLV 903 (978)
Q Consensus 827 ~~~~f~~~v~~~~~~~~~~~~~~--~~~~~~~i~~si~~~~i~~~i~~~i~~-~~~~~~~~~~~~~~~~s~~~wl~il~~ 903 (978)
.+.+|+.+++.+.+..+ ..|+. .++.+...+..+++.++++++..++|. .++. +|+..+.++.+|+.++.+
T Consensus 807 ~t~~f~~l~~~q~~~~~-~~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~-----~f~~~~l~~~~~~~~~~~ 880 (903)
T PRK15122 807 QSGWFIEGLLSQTLVVH-MLRTQKIPFIQSTAALPVLLTTGLIMAIGIYIPFSPLGA-----MVGLEPLPWSYFPWLAAT 880 (903)
T ss_pred HHHHHHHHHHHHHHHHH-hhCcCCCCcCcchHHHHHHHHHHHHHHHHHHhhHHHHHH-----HhCCCCCCHHHHHHHHHH
Confidence 56778888888877764 33332 334455666667777777777777774 1233 677888899999999888
Q ss_pred HHHHHHHHHHHHHH
Q 002029 904 LMSSLLPYFTYSAI 917 (978)
Q Consensus 904 ~~~~ll~~~~~k~~ 917 (978)
+++.++...+.|.+
T Consensus 881 ~~~~~~~~e~~k~~ 894 (903)
T PRK15122 881 LLGYCLVAQGMKRF 894 (903)
T ss_pred HHHHHHHHHHHHHH
Confidence 88888777777733
No 14
>TIGR01657 P-ATPase-V P-type ATPase of unknown pump specificity (type V). These P-type ATPases form a distinct clade but the substrate of their pumping activity has yet to be determined. This clade has been designated type V in.
Probab=100.00 E-value=2.4e-80 Score=780.41 Aligned_cols=680 Identities=19% Similarity=0.214 Sum_probs=478.0
Q ss_pred CceeecCceecc------CCeEEEEEEEeCccc---hhccccCCCCCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 002029 42 QQLLLRDSKLRN------TDCIYGAVIFTGRDT---KVFQNSTGPPSKRSKVERRMDKIIYFLFGILVLMSFIGSIFFGI 112 (978)
Q Consensus 42 ~n~l~~Gs~l~~------tg~~~gvVv~tG~~T---ki~~~~~~~~~k~s~l~~~~n~~~~~~~~~~~~~~~i~~i~~~~ 112 (978)
+|++|+||.+.. .|.+.|+|++||.+| ++.+....++.+.+++++.+.+++..++.+.++.+++.+ ..++
T Consensus 311 ~~~lf~GT~v~~~~~~~g~g~~~~vV~~TG~~T~~G~i~~~i~~~~~~~~~~~~~~~~~~~~l~~~a~i~~i~~~-~~~~ 389 (1054)
T TIGR01657 311 KHVLFGGTKILQIRPYPGDTGCLAIVVRTGFSTSKGQLVRSILYPKPRVFKFYKDSFKFILFLAVLALIGFIYTI-IELI 389 (1054)
T ss_pred ceEEEcCCEEEEEecCCCCCcEEEEEEeCCccccchHHHHHhhCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHH-HHHH
Confidence 468999999984 378999999999999 444444455566788999988887766554443332221 1111
Q ss_pred hhccccccccccccccCCCCCCCcCCchhhHHHHHHHHHHHHHHHhccccchhhhhHHHHHHHHHHHHhhccccccccCC
Q 002029 113 ATREDLQDGKMKRWYLRPDDTTAYYDPKRAAVAAVLHFLTALMLYGYLIPISLYVSIEIVKILQSIFINQDLHMYYEETD 192 (978)
Q Consensus 113 ~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~iP~sL~v~i~~~~~~~~~~i~~d~~m~~~~~~ 192 (978)
..+. .| ...+++++.+++.+||++||++++++...+.. +| ++
T Consensus 390 ~~~~--------~~--------------------~~~~l~~l~iiv~~vP~~LP~~~ti~l~~~~~------rL----~k 431 (1054)
T TIGR01657 390 KDGR--------PL--------------------GKIILRSLDIITIVVPPALPAELSIGINNSLA------RL----KK 431 (1054)
T ss_pred HcCC--------cH--------------------HHHHHHHHHHHHhhcCchHHHHHHHHHHHHHH------HH----HH
Confidence 1110 11 33688899999999999999999999988888 67 88
Q ss_pred CcccccCcccccccccceEEEeeCCcccccCeeEEEEEEECCeeeCCCchHHHHHHHhhcCCCCccchhhhhhcccccCC
Q 002029 193 KPARARTSNLNEELGQVDTILSDKTGTLTCNSMEFIKCSIAGTSYGRGVTEVERAMARRKGSPLEEEVTEEQEDKASIKG 272 (978)
Q Consensus 193 ~~~~~r~~~~~e~Lg~v~~I~sDKTGTLT~n~m~~~~~~i~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 272 (978)
++++||+++.+|.||+++++|||||||||+|+|+|.+++..+........
T Consensus 432 ~~il~~~~~~ie~lG~v~vicfDKTGTLTen~m~v~~v~~~~~~~~~~~~------------------------------ 481 (1054)
T TIGR01657 432 KGIFCTSPFRINFAGKIDVCCFDKTGTLTEDGLDLRGVQGLSGNQEFLKI------------------------------ 481 (1054)
T ss_pred CCEEEcCcccceecceeeEEEEcCCCCCccCCeeEEeEecccCccccccc------------------------------
Confidence 99999999999999999999999999999999999998754321000000
Q ss_pred cccCchhhhcCCCCCCCChHHHHHHHHHHhhhcceeccccCCCCcEEEecCCccHHHHHHHHHHcCCEEEe-ecCc---e
Q 002029 273 FNFEDERIMNGSWVNEPHADVIQKFLRLLAICHTALPEVDEENGKISYEAESPDEAAFVIAARELGFEFYE-RTQT---S 348 (978)
Q Consensus 273 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~lalC~~~~~~~~~~~~~~~y~~~sp~E~Alv~~a~~~g~~~~~-r~~~---~ 348 (978)
. .+........+..++++||++....+ + ..|||.|.|+++++ |+.+.. .+.. .
T Consensus 482 -------~------~~~~~~~~~~~~~~~a~C~~~~~~~~------~-~~Gdp~E~al~~~~---~~~~~~~~~~~~~~~ 538 (1054)
T TIGR01657 482 -------V------TEDSSLKPSITHKALATCHSLTKLEG------K-LVGDPLDKKMFEAT---GWTLEEDDESAEPTS 538 (1054)
T ss_pred -------c------ccccccCchHHHHHHHhCCeeEEECC------E-EecCHHHHHHHHhC---CCEEECCCCcccccc
Confidence 0 00000122356778999999865321 1 35799999999975 555433 1110 0
Q ss_pred e--EEEecCCCCCccceeEeeEeEeecCCCCCceEEEEEEeCC-CeEEEEEeCCchHHHHHhcccchhhHHHHHHHHHHH
Q 002029 349 I--SVHELDPVTGTKVERSYSLLNVLEFSSSRKRMSVIVRSEE-GTLLLLSKGADSVMFERLAENGREFEEQTKEHINEY 425 (978)
Q Consensus 349 ~--~i~~~~~~~~~~~~~~~~il~~~~F~s~rkrmsviv~~~~-~~~~l~~KGa~~~i~~~~~~~~~~~~~~~~~~l~~~ 425 (978)
. .+.... ....+++++.+||+|+||||||+++.++ +++++|+|||||.|+++|++. ..++++.+.+++|
T Consensus 539 ~~~~i~~~~------~~~~~~il~~~pF~S~~krMsvvv~~~~~~~~~~~~KGApE~Il~~c~~~--~~p~~~~~~~~~~ 610 (1054)
T TIGR01657 539 ILAVVRTDD------PPQELSIIRRFQFSSALQRMSVIVSTNDERSPDAFVKGAPETIQSLCSPE--TVPSDYQEVLKSY 610 (1054)
T ss_pred cccceeccC------CCceEEEEEEEeecCCCCEEEEEEEEcCCCeEEEEEECCHHHHHHHcCCc--CCChhHHHHHHHH
Confidence 0 011000 1257999999999999999999999864 578899999999999999864 3567888899999
Q ss_pred HHccceeEeeEEEeCCHHHHHHHHHHHHHHhhcccccHHHHHHHHHHHhhcccEEEEEEeeccccCCChHHHHHHHHHcC
Q 002029 426 ADAGLRTLILAYRELDEKEYKQFNEEFTEAKNSVSADREELAEEIAEKIEKNLILLGATAVEDKLQNGVPECIDKLAQAG 505 (978)
Q Consensus 426 a~~Glr~l~~A~r~l~~~e~~~~~~~~~~a~~~l~~~r~~~~~~~~~~ie~dl~llG~i~ieD~lr~~v~~~I~~L~~aG 505 (978)
+.+|+|||++|||++++.+++++.+ .+ .+.+|+||+|+|+++++||+|++++++|+.|++||
T Consensus 611 a~~G~RVLalA~k~l~~~~~~~~~~----------~~--------r~~~E~~L~flGli~~~d~lr~~~~~~I~~l~~ag 672 (1054)
T TIGR01657 611 TREGYRVLALAYKELPKLTLQKAQD----------LS--------RDAVESNLTFLGFIVFENPLKPDTKEVIKELKRAS 672 (1054)
T ss_pred HhcCCEEEEEEEeecCccchhhhhh----------cc--------HHHHhcCceEEEEEEEecCCCccHHHHHHHHHHCC
Confidence 9999999999999997543322211 12 25689999999999999999999999999999999
Q ss_pred CeEEEEcCCChhhHHHHHHHcCccccCceEEEEecCCCcc---cccc---hhhhHHHHHHHHHHHHHHHHHhhhhhhccc
Q 002029 506 IKLWVLTGDKMETAINIGFACSLLRQGMRQVIISSETPES---KTLE---KSEDKSAAAAALKASVLHQLIRGKELLDSS 579 (978)
Q Consensus 506 Ikv~mlTGD~~~tA~~ia~~~gl~~~~~~~i~i~~~~~~~---~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 579 (978)
|++||+|||+..||.+||++|||+.++...+..+....+. ..+. .+.... ........ ...... ...
T Consensus 673 i~v~miTGD~~~TA~~iA~~~gii~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~----~~~~~~--~~~ 745 (1054)
T TIGR01657 673 IRTVMITGDNPLTAVHVARECGIVNPSNTLILAEAEPPESGKPNQIKFEVIDSIPF-ASTQVEIP----YPLGQD--SVE 745 (1054)
T ss_pred CeEEEECCCCHHHHHHHHHHcCCCCCCceEEEeecccccCCCCceEEEEecCcccc-cccccccc----Cccccc--chh
Confidence 9999999999999999999999998775555443221100 0000 000000 00000000 000000 000
Q ss_pred cCCCCCeEEEEcCchhhhhchhhHHHHHHHHHhccCeeEEEeCCchhHHHHHHHHHccCCCeEEEEcCCcCCHHHhhhcc
Q 002029 580 NESLGPLALIIDGKSLTYALEDDVKDLFLELAIGCASVICCRSSPKQKALVTRLVKTKTSSTTLAIGDGANDVGMLQEAD 659 (978)
Q Consensus 580 ~~~~~~~~lvi~G~~l~~~~~~~~~~~f~~l~~~~~~vi~~r~sP~qK~~iV~~lk~~~~~~v~aiGDG~ND~~ml~~Ad 659 (978)
......+.++++|++++.+.+. ..+.+.++..+++ ||||++|+||.++|+.+|+ .|++|+|+|||+||+||||+||
T Consensus 746 ~~~~~~~~~~itG~~l~~l~~~-~~~~l~~~~~~~~--VfAR~sP~qK~~iV~~lq~-~g~~V~m~GDG~ND~~ALK~Ad 821 (1054)
T TIGR01657 746 DLLASRYHLAMSGKAFAVLQAH-SPELLLRLLSHTT--VFARMAPDQKETLVELLQK-LDYTVGMCGDGANDCGALKQAD 821 (1054)
T ss_pred hhcccceEEEEEcHHHHHHHHh-hHHHHHHHHhcCe--EEEecCHHHHHHHHHHHHh-CCCeEEEEeCChHHHHHHHhcC
Confidence 0122356789999999876432 2234555555444 9999999999999999998 8999999999999999999999
Q ss_pred ccccccCCccchhccccceehhc--hhhhHHHHHHhhhhhhhHhhHhHHHHHHHHHHHHHHHHHHHHhhccccccchhhH
Q 002029 660 IGVGISGVEGMQAVMSSDIAIAQ--FRFLERLLLVHGHWCYRRISSMICYFFYKNIAFGFTLFFFEAYASFSGQPVYNDW 737 (978)
Q Consensus 660 vGI~i~g~e~~~a~~asD~vi~~--f~~l~~lll~~gR~~~~~i~~~i~~~~~~n~~~~~~~~~~~~~~~~s~~~~~~~~ 737 (978)
|||+|+++| |+.||||++.+ |+.+.++ +.+||.++.++.+++.|.+..++...+..++..+. + .+++++
T Consensus 822 VGIam~~~d---as~AA~f~l~~~~~~~I~~~-I~eGR~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~----~-~~l~~~ 892 (1054)
T TIGR01657 822 VGISLSEAE---ASVAAPFTSKLASISCVPNV-IREGRCALVTSFQMFKYMALYSLIQFYSVSILYLI----G-SNLGDG 892 (1054)
T ss_pred cceeecccc---ceeecccccCCCcHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc----c-CcCccH
Confidence 999997765 56899999986 6668888 79999999999999999988888765554432222 3 458899
Q ss_pred HHHHHHHHHhhhhHhhhhccccCCChHHhhhCccchhcccccccccHHHHHHHHHHHHHHHHHHHHHHHHhhccccccCC
Q 002029 738 FLSLYNVFFTSLPVIALGVFDQDVSARFCLKFPLLYQEGVQNILFSWTRILGWALNGVANAAIIFFFCIHAMKQQAFRKG 817 (978)
Q Consensus 738 ~~~~~n~i~~~~p~~~l~~~~~~~~~~~~~~~P~ly~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~ 817 (978)
|++|+|++++.+|+++++..+ +.+.++++|+ ..+++++.++..++.+++++.++.++.+++....+++...
T Consensus 893 Q~l~i~li~~~~~~l~l~~~~---p~~~l~~~~P------~~~l~~~~~~~si~~q~~i~~~~~~~~~~~~~~~~~~~~~ 963 (1054)
T TIGR01657 893 QFLTIDLLLIFPVALLMSRNK---PLKKLSKERP------PSNLFSVYILTSVLIQFVLHILSQVYLVFELHAQPWYKPE 963 (1054)
T ss_pred HHHHHHHHHHHHHHHHHHcCC---chhhcCCCCC------CccccCHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCccCC
Confidence 999999999999999998753 4444444443 3689999999999999999999988887766543332111
Q ss_pred Cc-----eehhhHHHHHHHHHHHHHHHHHHHHh-hc----chhhHHHHHHHHHHHHHHHHHH
Q 002029 818 GE-----VIGLEILGTTMYTCVVWVVNCQMALS-VT----YFTYIQHLFIWGGITFWYIFLL 869 (978)
Q Consensus 818 g~-----~~~~~~~~~~~f~~~v~~~~~~~~~~-~~----~~~~~~~~~i~~si~~~~i~~~ 869 (978)
.. ........|++|....+ +.+..+.. .. ..+++.|..+++++++.+++++
T Consensus 964 ~~~~~~~~~~~~~~~T~~f~~~~~-~~~~~~~~~~~g~pf~~~~~~N~~~~~~~~~~~~~~~ 1024 (1054)
T TIGR01657 964 NPVDLEKENFPNLLNTVLFFVSSF-QYLITAIVNSKGPPFREPIYKNKPFVYLLITGLGLLL 1024 (1054)
T ss_pred CCCCcccccCccHHHHHHHHHHHH-HHHHheEEEcCCcchhhhHHHhHHHHHHHHHHHHHHH
Confidence 10 01112345777743333 33332221 11 1235677777777766655554
No 15
>PRK10517 magnesium-transporting ATPase MgtA; Provisional
Probab=100.00 E-value=6.6e-80 Score=758.86 Aligned_cols=639 Identities=17% Similarity=0.206 Sum_probs=472.6
Q ss_pred CceeecCceeccCCeEEEEEEEeCccchhc---cccCCCCCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccc
Q 002029 42 QQLLLRDSKLRNTDCIYGAVIFTGRDTKVF---QNSTGPPSKRSKVERRMDKIIYFLFGILVLMSFIGSIFFGIATREDL 118 (978)
Q Consensus 42 ~n~l~~Gs~l~~tg~~~gvVv~tG~~Tki~---~~~~~~~~k~s~l~~~~n~~~~~~~~~~~~~~~i~~i~~~~~~~~~~ 118 (978)
+|++|+||.+.+ |.+.++|+.||.+|.++ .....+..+++|+|+.++++..++..+.++++.+..+++.+...
T Consensus 241 ~n~vfaGT~V~~-G~~~~vV~atG~~T~~GkI~~~v~~~~~~~t~lq~~~~~i~~~l~~~~~~~~~~v~~i~~~~~~--- 316 (902)
T PRK10517 241 DTLCFMGTNVVS-GTAQAVVIATGANTWFGQLAGRVSEQDSEPNAFQQGISRVSWLLIRFMLVMAPVVLLINGYTKG--- 316 (902)
T ss_pred ccceeeCceEee-eeEEEEEEEeccccHHHHHHHHhhccCCCCCcHHHHHHHHHHHHHHHHHHHHHHhhhHHHHhcC---
Confidence 379999999997 99999999999999663 34455667789999999999998888777777666544322111
Q ss_pred ccccccccccCCCCCCCcCCchhhHHHHHHHHHHHHHHHhccccchhhhhHHHHHHHHHHHHhhccccccccCCCccccc
Q 002029 119 QDGKMKRWYLRPDDTTAYYDPKRAAVAAVLHFLTALMLYGYLIPISLYVSIEIVKILQSIFINQDLHMYYEETDKPARAR 198 (978)
Q Consensus 119 ~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~iP~sL~v~i~~~~~~~~~~i~~d~~m~~~~~~~~~~~r 198 (978)
.| ...+..++++++.+||++||++++++...++. +| +++++++|
T Consensus 317 ------~~--------------------~~~l~~alsv~V~~~Pe~LP~~vt~~la~g~~------~m----ak~~ilVk 360 (902)
T PRK10517 317 ------DW--------------------WEAALFALSVAVGLTPEMLPMIVTSTLARGAV------KL----SKQKVIVK 360 (902)
T ss_pred ------CH--------------------HHHHHHHHHHHHHHcccHHHHHHHHHHHHHHH------HH----HhCCcEEe
Confidence 11 23677889999999999999999998888877 66 88999999
Q ss_pred CcccccccccceEEEeeCCcccccCeeEEEEEEECCeeeCCCchHHHHHHHhhcCCCCccchhhhhhcccccCCcccCch
Q 002029 199 TSNLNEELGQVDTILSDKTGTLTCNSMEFIKCSIAGTSYGRGVTEVERAMARRKGSPLEEEVTEEQEDKASIKGFNFEDE 278 (978)
Q Consensus 199 ~~~~~e~Lg~v~~I~sDKTGTLT~n~m~~~~~~i~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 278 (978)
+++.+|+||++|+||||||||||+|+|++.++... .+.
T Consensus 361 ~l~aiE~lg~v~vic~DKTGTLT~n~m~V~~~~~~---~~~--------------------------------------- 398 (902)
T PRK10517 361 RLDAIQNFGAMDILCTDKTGTLTQDKIVLENHTDI---SGK--------------------------------------- 398 (902)
T ss_pred cchhhhhccCCCEEEecCCCccccceEEEEEEecC---CCC---------------------------------------
Confidence 99999999999999999999999999999876310 000
Q ss_pred hhhcCCCCCCCChHHHHHHHHHHhhhcceeccccCCCCcEEEecCCccHHHHHHHHHHcCCEEEeecCceeEEEecCCCC
Q 002029 279 RIMNGSWVNEPHADVIQKFLRLLAICHTALPEVDEENGKISYEAESPDEAAFVIAARELGFEFYERTQTSISVHELDPVT 358 (978)
Q Consensus 279 ~l~~~~~~~~~~~~~~~~~~~~lalC~~~~~~~~~~~~~~~y~~~sp~E~Alv~~a~~~g~~~~~r~~~~~~i~~~~~~~ 358 (978)
. .++++...++|.... . ..+||.|.|+++++...+..
T Consensus 399 -----------~---~~~ll~~a~l~~~~~----~-------~~~~p~d~All~~a~~~~~~------------------ 435 (902)
T PRK10517 399 -----------T---SERVLHSAWLNSHYQ----T-------GLKNLLDTAVLEGVDEESAR------------------ 435 (902)
T ss_pred -----------C---HHHHHHHHHhcCCcC----C-------CCCCHHHHHHHHHHHhcchh------------------
Confidence 0 023445555543321 0 13699999999998753210
Q ss_pred CccceeEeeEeEeecCCCCCceEEEEEEeCCCeEEEEEeCCchHHHHHhccc---------chhhHHHHHHHHHHHHHcc
Q 002029 359 GTKVERSYSLLNVLEFSSSRKRMSVIVRSEEGTLLLLSKGADSVMFERLAEN---------GREFEEQTKEHINEYADAG 429 (978)
Q Consensus 359 ~~~~~~~~~il~~~~F~s~rkrmsviv~~~~~~~~l~~KGa~~~i~~~~~~~---------~~~~~~~~~~~l~~~a~~G 429 (978)
.....|+.+..+||||+||||+++++.+++.+.+++|||++.|+++|+.. +++..+++.+..++++.+|
T Consensus 436 --~~~~~~~~~~~~pFds~~k~msvvv~~~~~~~~~~~KGa~e~il~~c~~~~~~~~~~~l~~~~~~~i~~~~~~~a~~G 513 (902)
T PRK10517 436 --SLASRWQKIDEIPFDFERRRMSVVVAENTEHHQLICKGALEEILNVCSQVRHNGEIVPLDDIMLRRIKRVTDTLNRQG 513 (902)
T ss_pred --hhhhcCceEEEeeeCCCcceEEEEEEECCCeEEEEEeCchHHHHHhchhhhcCCCeecCCHHHHHHHHHHHHHHHhcC
Confidence 01246778889999999999999999877888999999999999999752 2234566778889999999
Q ss_pred ceeEeeEEEeCCHHHHHHHHHHHHHHhhcccccHHHHHHHHHHHhhcccEEEEEEeeccccCCChHHHHHHHHHcCCeEE
Q 002029 430 LRTLILAYRELDEKEYKQFNEEFTEAKNSVSADREELAEEIAEKIEKNLILLGATAVEDKLQNGVPECIDKLAQAGIKLW 509 (978)
Q Consensus 430 lr~l~~A~r~l~~~e~~~~~~~~~~a~~~l~~~r~~~~~~~~~~ie~dl~llG~i~ieD~lr~~v~~~I~~L~~aGIkv~ 509 (978)
+||+++|||+++.++. ++ + ...|+|++|+|+++++||+|++++++|++|+++||+++
T Consensus 514 ~rvlavA~k~~~~~~~-~~-------------~---------~~~e~~l~~lGli~~~Dp~R~~a~~aI~~l~~aGI~v~ 570 (902)
T PRK10517 514 LRVVAVATKYLPAREG-DY-------------Q---------RADESDLILEGYIAFLDPPKETTAPALKALKASGVTVK 570 (902)
T ss_pred CEEEEEEEecCCcccc-cc-------------c---------cccccCceeeehHhhhCcchhhHHHHHHHHHHCCCEEE
Confidence 9999999998865321 00 0 11368999999999999999999999999999999999
Q ss_pred EEcCCChhhHHHHHHHcCccccCceEEEEecCCCcccccchhhhHHHHHHHHHHHHHHHHHhhhhhhccccCCCCCeEEE
Q 002029 510 VLTGDKMETAINIGFACSLLRQGMRQVIISSETPESKTLEKSEDKSAAAAALKASVLHQLIRGKELLDSSNESLGPLALI 589 (978)
Q Consensus 510 mlTGD~~~tA~~ia~~~gl~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv 589 (978)
|+|||+..||.+||+++||..+. +
T Consensus 571 miTGD~~~tA~~IA~~lGI~~~~--------------------------------------------------------v 594 (902)
T PRK10517 571 ILTGDSELVAAKVCHEVGLDAGE--------------------------------------------------------V 594 (902)
T ss_pred EEcCCCHHHHHHHHHHcCCCccC--------------------------------------------------------c
Confidence 99999999999999999993211 6
Q ss_pred EcCchhhhhchhhHHHHHHHHHhccCeeEEEeCCchhHHHHHHHHHccCCCeEEEEcCCcCCHHHhhhccccccccCCcc
Q 002029 590 IDGKSLTYALEDDVKDLFLELAIGCASVICCRSSPKQKALVTRLVKTKTSSTTLAIGDGANDVGMLQEADIGVGISGVEG 669 (978)
Q Consensus 590 i~G~~l~~~~~~~~~~~f~~l~~~~~~vi~~r~sP~qK~~iV~~lk~~~~~~v~aiGDG~ND~~ml~~AdvGI~i~g~e~ 669 (978)
++|.+++.+.++++.+...+ ..||+|++|+||.++|+.+|+ .|++|+|+|||+||+|||++|||||+|+ +..
T Consensus 595 ~~G~el~~l~~~el~~~~~~------~~VfAr~sPe~K~~IV~~Lq~-~G~vVam~GDGvNDaPALk~ADVGIAmg-~gt 666 (902)
T PRK10517 595 LIGSDIETLSDDELANLAER------TTLFARLTPMHKERIVTLLKR-EGHVVGFMGDGINDAPALRAADIGISVD-GAV 666 (902)
T ss_pred eeHHHHHhCCHHHHHHHHhh------CcEEEEcCHHHHHHHHHHHHH-CCCEEEEECCCcchHHHHHhCCEEEEeC-CcC
Confidence 67777776665555544432 239999999999999999998 8999999999999999999999999995 222
Q ss_pred chhccccceehhc--hhhhHHHHHHhhhhhhhHhhHhHHHHHHHHHHHHHHHHHHHHhhccccccchhhHHHHHHHHHHh
Q 002029 670 MQAVMSSDIAIAQ--FRFLERLLLVHGHWCYRRISSMICYFFYKNIAFGFTLFFFEAYASFSGQPVYNDWFLSLYNVFFT 747 (978)
Q Consensus 670 ~~a~~asD~vi~~--f~~l~~lll~~gR~~~~~i~~~i~~~~~~n~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~n~i~~ 747 (978)
..|+++||+++.+ |..+..+ +.+||.+|+|+++++.|.+..|+..++..++..++. +..++.+.|++|.|++++
T Consensus 667 dvAkeaADiVLldd~~~~I~~a-i~~gR~i~~nI~k~i~~~ls~n~~~v~~~~~~~~~~---~~~pl~~~qiL~inl~~D 742 (902)
T PRK10517 667 DIAREAADIILLEKSLMVLEEG-VIEGRRTFANMLKYIKMTASSNFGNVFSVLVASAFL---PFLPMLPLHLLIQNLLYD 742 (902)
T ss_pred HHHHHhCCEEEecCChHHHHHH-HHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHh---hhhhhHHHHHHHHHHHHH
Confidence 3399999999998 4558888 899999999999999999999999988888776663 224689999999999999
Q ss_pred hhhHhhhhccccCCChHHhhhCccchhcccccccccHHHHHHHHHHHHHHHHHHHHHHHHhhccccccCCCceehhhHHH
Q 002029 748 SLPVIALGVFDQDVSARFCLKFPLLYQEGVQNILFSWTRILGWALNGVANAAIIFFFCIHAMKQQAFRKGGEVIGLEILG 827 (978)
Q Consensus 748 ~~p~~~l~~~~~~~~~~~~~~~P~ly~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 827 (978)
+|.++++.++ ++ +.++++|+-+. ... .....+..|++.+++.+..+++.+.. ++.... .....+.
T Consensus 743 -~~~~al~~d~--~~-~~~m~~p~r~~----~~~----~~~~~~~~g~~~~~~~~~~~~~~~~~--~~~~~~-~~~~~~~ 807 (902)
T PRK10517 743 -VSQVAIPFDN--VD-DEQIQKPQRWN----PAD----LGRFMVFFGPISSIFDILTFCLMWWV--FHANTP-ETQTLFQ 807 (902)
T ss_pred -HhHHhhcCCC--CC-hhhhcCCCCCC----HHH----HHHHHHHHHHHHHHHHHHHHHHHHHH--ccccch-hhHhHHH
Confidence 7999998853 34 44555565211 111 12223455666554444333322111 110000 0001244
Q ss_pred HHHHHHHHHHHHHHHHHhhcch--hhHHHHHHHHHHHHHHHHHHHHhccCcc-ccchhHHHHHHHhcCC--hHHHHHHHH
Q 002029 828 TTMYTCVVWVVNCQMALSVTYF--TYIQHLFIWGGITFWYIFLLAYGAMDPY-ISTTAYKVFIEACAPA--PSFWLITLL 902 (978)
Q Consensus 828 ~~~f~~~v~~~~~~~~~~~~~~--~~~~~~~i~~si~~~~i~~~i~~~i~~~-~~~~~~~~~~~~~~~s--~~~wl~il~ 902 (978)
+.+|+.+++.+.+..+ ..|+. .++.+...+..+++.++.+++..++|.. ++. +|+..+.+ +..|+.+++
T Consensus 808 ~~~F~~~~~~q~~~~~-~~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~-----~~~~~~l~~~~~~~~~~~~ 881 (902)
T PRK10517 808 SGWFVVGLLSQTLIVH-MIRTRRIPFIQSRAAWPLMIMTLIVMAVGIALPFSPLAS-----YLQLQALPLSYFPWLVAIL 881 (902)
T ss_pred HHHHHHHHHHHHHHHH-hhccCCCCcccchHHHHHHHHHHHHHHHHHHhhHHHHHH-----hhCCcCCChhHHHHHHHHH
Confidence 5568888888777764 33332 3456677788888888888877887721 232 55566666 567777766
Q ss_pred HHHHHHHHHHHHHHHHHh
Q 002029 903 VLMSSLLPYFTYSAIQMR 920 (978)
Q Consensus 903 ~~~~~ll~~~~~k~~~r~ 920 (978)
++.+ ++....-+.+.|+
T Consensus 882 ~~~~-~~~e~~K~~~~~~ 898 (902)
T PRK10517 882 AGYM-TLTQLVKGFYSRR 898 (902)
T ss_pred HHHH-HHHHHHHHHHHHh
Confidence 6655 3333333344443
No 16
>TIGR01524 ATPase-IIIB_Mg magnesium-translocating P-type ATPase. The magnesium ATPases have been classified as type IIIB by a phylogenetic analysis.
Probab=100.00 E-value=3.5e-79 Score=753.59 Aligned_cols=641 Identities=18% Similarity=0.192 Sum_probs=474.7
Q ss_pred CCccccCCc---------------CceeecCceeccCCeEEEEEEEeCccchhc---cccCCCCCCcCHHHHHHHHHHHH
Q 002029 33 EEQQYPLTP---------------QQLLLRDSKLRNTDCIYGAVIFTGRDTKVF---QNSTGPPSKRSKVERRMDKIIYF 94 (978)
Q Consensus 33 ~~~~~pl~~---------------~n~l~~Gs~l~~tg~~~gvVv~tG~~Tki~---~~~~~~~~k~s~l~~~~n~~~~~ 94 (978)
.||+.|+.+ +|++|+||.+.+ |.+.++|++||.+|.++ ..... +.+++|+|+.++++..+
T Consensus 183 TGES~PV~K~~~~~~~~~~~~~~~~n~vfaGT~v~~-G~~~~~V~~tG~~T~~gki~~~v~~-~~~~t~lq~~~~~i~~~ 260 (867)
T TIGR01524 183 TGESLPVEKFVEDKRARDPEILERENLCFMGTNVLS-GHAQAVVLATGSSTWFGSLAIAATE-RRGQTAFDKGVKSVSKL 260 (867)
T ss_pred cCCCCcccccCCccccccccccccccceecCCeEEE-eEEEEEEEEEcCccHHHHHHHHhhC-CCCCCcHHHHHHHHHHH
Confidence 388888732 478999999997 99999999999999663 33344 55678999999999999
Q ss_pred HHHHHHHHHHHHHHHHHhhhccccccccccccccCCCCCCCcCCchhhHHHHHHHHHHHHHHHhccccchhhhhHHHHHH
Q 002029 95 LFGILVLMSFIGSIFFGIATREDLQDGKMKRWYLRPDDTTAYYDPKRAAVAAVLHFLTALMLYGYLIPISLYVSIEIVKI 174 (978)
Q Consensus 95 ~~~~~~~~~~i~~i~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~iP~sL~v~i~~~~~ 174 (978)
+..+.++++++.++++.+... .| ...+..++++++.+||++||++++++..
T Consensus 261 ~~~~~~~~~~i~~~~~~~~~~---------~~--------------------~~~~~~al~l~v~~iP~~Lp~~vt~~la 311 (867)
T TIGR01524 261 LIRFMLVMVPVVLMINGLMKG---------DW--------------------LEAFLFALAVAVGLTPEMLPMIVSSNLA 311 (867)
T ss_pred HHHHHHHHHHHheehHHHhcC---------CH--------------------HHHHHHHHHHHHHhCcchHHHHHHHHHH
Confidence 988887777666544322111 12 2267788999999999999999999988
Q ss_pred HHHHHHhhccccccccCCCcccccCcccccccccceEEEeeCCcccccCeeEEEEEEECCeeeCCCchHHHHHHHhhcCC
Q 002029 175 LQSIFINQDLHMYYEETDKPARARTSNLNEELGQVDTILSDKTGTLTCNSMEFIKCSIAGTSYGRGVTEVERAMARRKGS 254 (978)
Q Consensus 175 ~~~~~i~~d~~m~~~~~~~~~~~r~~~~~e~Lg~v~~I~sDKTGTLT~n~m~~~~~~i~~~~y~~~~~~~~~~~~~~~~~ 254 (978)
.++. +| +++++++|+++.+|+||++++||||||||||+|+|++.++..... .
T Consensus 312 ~g~~------~m----ak~~ilvk~l~aiE~lg~v~vic~DKTGTLT~~~m~v~~~~~~~~-----~------------- 363 (867)
T TIGR01524 312 KGAI------NM----SKKKVIVKELSAIQNFGAMDILCTDKTGTLTQDKIELEKHIDSSG-----E------------- 363 (867)
T ss_pred HHHH------HH----HhCCcEEccchhhhhccCccEEEecCCCccccCeEEEEEEecCCC-----C-------------
Confidence 8887 66 889999999999999999999999999999999999988641100 0
Q ss_pred CCccchhhhhhcccccCCcccCchhhhcCCCCCCCChHHHHHHHHHHhhhcceeccccCCCCcEEEecCCccHHHHHHHH
Q 002029 255 PLEEEVTEEQEDKASIKGFNFEDERIMNGSWVNEPHADVIQKFLRLLAICHTALPEVDEENGKISYEAESPDEAAFVIAA 334 (978)
Q Consensus 255 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~lalC~~~~~~~~~~~~~~~y~~~sp~E~Alv~~a 334 (978)
. .++++...++|+... . ..+||.|.|+++++
T Consensus 364 -----------------------------------~---~~~~l~~a~l~~~~~----~-------~~~~p~~~Al~~~~ 394 (867)
T TIGR01524 364 -----------------------------------T---SERVLKMAWLNSYFQ----T-------GWKNVLDHAVLAKL 394 (867)
T ss_pred -----------------------------------C---HHHHHHHHHHhCCCC----C-------CCCChHHHHHHHHH
Confidence 0 013344444443321 0 13599999999998
Q ss_pred HHcCCEEEeecCceeEEEecCCCCCccceeEeeEeEeecCCCCCceEEEEEEeCCCeEEEEEeCCchHHHHHhccc----
Q 002029 335 RELGFEFYERTQTSISVHELDPVTGTKVERSYSLLNVLEFSSSRKRMSVIVRSEEGTLLLLSKGADSVMFERLAEN---- 410 (978)
Q Consensus 335 ~~~g~~~~~r~~~~~~i~~~~~~~~~~~~~~~~il~~~~F~s~rkrmsviv~~~~~~~~l~~KGa~~~i~~~~~~~---- 410 (978)
.+.+... .+..|+.+..+||||+||||+++++++++.+++++|||++.|+++|+..
T Consensus 395 ~~~~~~~--------------------~~~~~~~~~~~pF~s~~k~ms~~v~~~~~~~~~~~KGa~e~il~~c~~~~~~~ 454 (867)
T TIGR01524 395 DESAARQ--------------------TASRWKKVDEIPFDFDRRRLSVVVENRAEVTRLICKGAVEEMLTVCTHKRFGG 454 (867)
T ss_pred Hhhchhh--------------------HhhcCceEEEeccCCCcCEEEEEEEcCCceEEEEEeCcHHHHHHhchhhhcCC
Confidence 7532110 1246777889999999999999998776678899999999999999752
Q ss_pred -----chhhHHHHHHHHHHHHHccceeEeeEEEeCCHHHHHHHHHHHHHHhhcccccHHHHHHHHHHHhhcccEEEEEEe
Q 002029 411 -----GREFEEQTKEHINEYADAGLRTLILAYRELDEKEYKQFNEEFTEAKNSVSADREELAEEIAEKIEKNLILLGATA 485 (978)
Q Consensus 411 -----~~~~~~~~~~~l~~~a~~Glr~l~~A~r~l~~~e~~~~~~~~~~a~~~l~~~r~~~~~~~~~~ie~dl~llG~i~ 485 (978)
+++.++++.+.+++++.+|+|++++|||+++.++.+ + .+..|+||+|+|+++
T Consensus 455 ~~~~l~~~~~~~i~~~~~~~a~~G~rvlavA~~~~~~~~~~-~----------------------~~~~e~~l~~lGli~ 511 (867)
T TIGR01524 455 AVVTLSESEKSELQDMTAEMNRQGIRVIAVATKTLKVGEAD-F----------------------TKTDEEQLIIEGFLG 511 (867)
T ss_pred ceecCCHHHHHHHHHHHHHHHhcCCEEEEEEEeccCccccc-c----------------------cccccCCcEEEEEEE
Confidence 223456778888999999999999999998754310 0 012368999999999
Q ss_pred eccccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCccccCceEEEEecCCCcccccchhhhHHHHHHHHHHHH
Q 002029 486 VEDKLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQGMRQVIISSETPESKTLEKSEDKSAAAAALKASV 565 (978)
Q Consensus 486 ieD~lr~~v~~~I~~L~~aGIkv~mlTGD~~~tA~~ia~~~gl~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~ 565 (978)
++||+|++++++|++|+++||+++|+|||+..||.+||+++||..++
T Consensus 512 l~Dp~R~~~~~aI~~l~~aGI~vvmiTGD~~~tA~aIA~~lGI~~~~--------------------------------- 558 (867)
T TIGR01524 512 FLDPPKESTKEAIAALFKNGINVKVLTGDNEIVTARICQEVGIDAND--------------------------------- 558 (867)
T ss_pred eeCCCchhHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCCCC---------------------------------
Confidence 99999999999999999999999999999999999999999995321
Q ss_pred HHHHHhhhhhhccccCCCCCeEEEEcCchhhhhchhhHHHHHHHHHhccCeeEEEeCCchhHHHHHHHHHccCCCeEEEE
Q 002029 566 LHQLIRGKELLDSSNESLGPLALIIDGKSLTYALEDDVKDLFLELAIGCASVICCRSSPKQKALVTRLVKTKTSSTTLAI 645 (978)
Q Consensus 566 ~~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~f~~l~~~~~~vi~~r~sP~qK~~iV~~lk~~~~~~v~ai 645 (978)
+++|.+++.+.++++.+... +..+|||++|+||.++|+.+|+ .|++|+|+
T Consensus 559 -----------------------v~~g~~l~~~~~~el~~~~~------~~~vfAr~~Pe~K~~iV~~lq~-~G~vVam~ 608 (867)
T TIGR01524 559 -----------------------FLLGADIEELSDEELARELR------KYHIFARLTPMQKSRIIGLLKK-AGHTVGFL 608 (867)
T ss_pred -----------------------eeecHhhhhCCHHHHHHHhh------hCeEEEECCHHHHHHHHHHHHh-CCCEEEEE
Confidence 55666666555444444332 3349999999999999999998 89999999
Q ss_pred cCCcCCHHHhhhcccccccc-CCccchhccccceehhc--hhhhHHHHHHhhhhhhhHhhHhHHHHHHHHHHHHHHHHHH
Q 002029 646 GDGANDVGMLQEADIGVGIS-GVEGMQAVMSSDIAIAQ--FRFLERLLLVHGHWCYRRISSMICYFFYKNIAFGFTLFFF 722 (978)
Q Consensus 646 GDG~ND~~ml~~AdvGI~i~-g~e~~~a~~asD~vi~~--f~~l~~lll~~gR~~~~~i~~~i~~~~~~n~~~~~~~~~~ 722 (978)
|||+||+|||++|||||+|+ |++. |+++||+++.+ |..+..+ +.+||.+|+|+++++.|.+..|+..++..++.
T Consensus 609 GDGvNDapALk~AdVGIAmg~gtdv--Ak~aADiVLldd~~~~I~~a-i~~gR~i~~ni~k~i~~~ls~n~~~~~~~~~~ 685 (867)
T TIGR01524 609 GDGINDAPALRKADVGISVDTAADI--AKEASDIILLEKSLMVLEEG-VIEGRNTFGNILKYLKMTASSNFGNVFSVLVA 685 (867)
T ss_pred CCCcccHHHHHhCCEEEEeCCccHH--HHHhCCEEEecCChHHHHHH-HHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHH
Confidence 99999999999999999995 3343 89999999998 5558888 89999999999999999999999988877776
Q ss_pred HHhhccccccchhhHHHHHHHHHHhhhhHhhhhccccCCChHHhhhCccchhcccccccccHHHHHHHHHHHHHHHHHHH
Q 002029 723 EAYASFSGQPVYNDWFLSLYNVFFTSLPVIALGVFDQDVSARFCLKFPLLYQEGVQNILFSWTRILGWALNGVANAAIIF 802 (978)
Q Consensus 723 ~~~~~~s~~~~~~~~~~~~~n~i~~~~p~~~l~~~~~~~~~~~~~~~P~ly~~~~~~~~~~~~~~~~~~~~~~~~s~~~~ 802 (978)
.++. ...|+.+.|++|.|++++ +|+++++.++ +. ...++.|+- ++.+ .....++..|++.+++.+
T Consensus 686 ~~~~---~~~pl~~~qil~inl~~d-~~~~al~~~~--~~-~~~m~~p~~----~~~~----~~~~~~~~~g~~~~~~~~ 750 (867)
T TIGR01524 686 SAFI---PFLPMLSLHLLIQNLLYD-FSQLTLPWDK--MD-REFLKKPHQ----WEQK----GMGRFMLCIGPVSSIFDI 750 (867)
T ss_pred HHHh---hhhhHHHHHHHHHHHHHH-HHHHhhcCCC--CC-hHhhCCCCC----CChh----hHHHHHHHHHHHHHHHHH
Confidence 6653 335699999999999999 7999998753 34 444466662 2222 222334445665544433
Q ss_pred HHHHHhhccccccCCCceehhhHHHHHHHHHHHHHHHHHHHHhhcch--hhHHHHHHHHHHHHHHHHHHHHhccCcc-cc
Q 002029 803 FFCIHAMKQQAFRKGGEVIGLEILGTTMYTCVVWVVNCQMALSVTYF--TYIQHLFIWGGITFWYIFLLAYGAMDPY-IS 879 (978)
Q Consensus 803 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~f~~~v~~~~~~~~~~~~~~--~~~~~~~i~~si~~~~i~~~i~~~i~~~-~~ 879 (978)
..++..+.. +...+. .....+.+..|+.+++.+.+..+ ..|+. .++.+...+..+++.++++++..++|.. ++
T Consensus 751 ~~~~~~~~~--~~~~~~-~~~~~~~t~~f~~~~~~~~~~~~-~~R~~~~~~~~n~~~~~~~~~~~~~~~~~~~~p~~~~~ 826 (867)
T TIGR01524 751 ATFLLMWFV--FSANTV-EEQALFQSGWFVVGLLSQTLVVH-MIRTEKIPFIQSRAAAPVMIATLLVMALGIIIPFSPLG 826 (867)
T ss_pred HHHHHHHHH--hcccch-hhhhHHHHHHHHHHHHHHHHHHH-hhCcCCCCcCcchHHHHHHHHHHHHHHHHHHhchhhhh
Confidence 332222111 000111 01113467778888888877764 33332 3456777788888888888888888852 23
Q ss_pred chhHHHHHHHhcC--ChHHHHHHHHHHHHHHHHHHHHHH
Q 002029 880 TTAYKVFIEACAP--APSFWLITLLVLMSSLLPYFTYSA 916 (978)
Q Consensus 880 ~~~~~~~~~~~~~--s~~~wl~il~~~~~~ll~~~~~k~ 916 (978)
. +|+..+. ++..|+.++.++++ +...+.|.
T Consensus 827 ~-----~f~~~~l~~~~~~~~~~~~~~~~--~~~e~~k~ 858 (867)
T TIGR01524 827 H-----SIGLVSLPLSYFPWLIAILVGYM--ATMQLVKT 858 (867)
T ss_pred h-----hhccccCCccHHHHHHHHHHHHH--HHHHHHHH
Confidence 3 4555544 55567777666554 33444443
No 17
>TIGR01647 ATPase-IIIA_H plasma-membrane proton-efflux P-type ATPase. This model describes the plasma membrane proton efflux P-type ATPase found in plants, fungi, protozoa, slime molds and archaea. The best studied representative is from yeast.
Probab=100.00 E-value=2e-74 Score=702.75 Aligned_cols=585 Identities=19% Similarity=0.259 Sum_probs=448.2
Q ss_pred eeEEE-EEEC-----CccccC--CcCceeecCceeccCCeEEEEEEEeCccchhcc---ccCCCCCCcCHHHHHHHHHHH
Q 002029 25 TFVGS-LELE-----EQQYPL--TPQQLLLRDSKLRNTDCIYGAVIFTGRDTKVFQ---NSTGPPSKRSKVERRMDKIIY 93 (978)
Q Consensus 25 ~f~G~-~~~~-----~~~~pl--~~~n~l~~Gs~l~~tg~~~gvVv~tG~~Tki~~---~~~~~~~k~s~l~~~~n~~~~ 93 (978)
-.+|. +.+| ||+.|+ ..+|.+|+||.+.+ |.+.++|+.||.+|.+.+ ...+++.+++++|+.++++..
T Consensus 130 vi~g~~~~VDeS~LTGES~PV~K~~~~~v~aGT~v~~-G~~~~~V~~tG~~T~~g~i~~lv~~~~~~~~~lq~~~~~i~~ 208 (755)
T TIGR01647 130 LFEGDYIQVDQAALTGESLPVTKKTGDIAYSGSTVKQ-GEAEAVVTATGMNTFFGKAAALVQSTETGSGHLQKILSKIGL 208 (755)
T ss_pred EEecCceEEEcccccCCccceEeccCCeeeccCEEEc-cEEEEEEEEcCCccHHHHHHHHhhccCCCCCcHHHHHHHHHH
Confidence 34565 6665 899998 56899999999997 999999999999996643 445556667899999999999
Q ss_pred HHHHHHHHHHHHHHHHHHhhhccccccccccccccCCCCCCCcCCchhhHHHHHHHHHHHHHHHhccccchhhhhHHHHH
Q 002029 94 FLFGILVLMSFIGSIFFGIATREDLQDGKMKRWYLRPDDTTAYYDPKRAAVAAVLHFLTALMLYGYLIPISLYVSIEIVK 173 (978)
Q Consensus 94 ~~~~~~~~~~~i~~i~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~iP~sL~v~i~~~~ 173 (978)
++.++.++++++.++++....+. .| ...+..++++++.+||++||++++++.
T Consensus 209 ~~~~~~~~~~~i~~~~~~~~~~~--------~~--------------------~~~~~~~i~vlv~a~P~~Lp~~~~~~l 260 (755)
T TIGR01647 209 FLIVLIGVLVLIELVVLFFGRGE--------SF--------------------REGLQFALVLLVGGIPIAMPAVLSVTM 260 (755)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCC--------CH--------------------HHHHHHHHHHHHHhCCcchHHHHHHHH
Confidence 99888887777665544331211 11 236778899999999999999999999
Q ss_pred HHHHHHHhhccccccccCCCcccccCcccccccccceEEEeeCCcccccCeeEEEEEEECCeeeCCCchHHHHHHHhhcC
Q 002029 174 ILQSIFINQDLHMYYEETDKPARARTSNLNEELGQVDTILSDKTGTLTCNSMEFIKCSIAGTSYGRGVTEVERAMARRKG 253 (978)
Q Consensus 174 ~~~~~~i~~d~~m~~~~~~~~~~~r~~~~~e~Lg~v~~I~sDKTGTLT~n~m~~~~~~i~~~~y~~~~~~~~~~~~~~~~ 253 (978)
..++. +| +++++++|+++.+|+||.+|+||||||||||+|+|++.+++..+..+.
T Consensus 261 a~g~~------r~----ak~gilvk~l~alE~lg~v~~i~~DKTGTLT~~~~~v~~~~~~~~~~~--------------- 315 (755)
T TIGR01647 261 AVGAA------EL----AKKKAIVTRLTAIEELAGMDILCSDKTGTLTLNKLSIDEILPFFNGFD--------------- 315 (755)
T ss_pred HHHHH------HH----HhCCeEEcccHHHHhccCCcEEEecCCCccccCceEEEEEEecCCCCC---------------
Confidence 88887 66 889999999999999999999999999999999999999875431100
Q ss_pred CCCccchhhhhhcccccCCcccCchhhhcCCCCCCCChHHHHHHHHHHhhhcceeccccCCCCcEEEecCCccHHHHHHH
Q 002029 254 SPLEEEVTEEQEDKASIKGFNFEDERIMNGSWVNEPHADVIQKFLRLLAICHTALPEVDEENGKISYEAESPDEAAFVIA 333 (978)
Q Consensus 254 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~lalC~~~~~~~~~~~~~~~y~~~sp~E~Alv~~ 333 (978)
.++++...++|+.. .++||.|.|++++
T Consensus 316 ----------------------------------------~~~~l~~a~~~~~~-------------~~~~pi~~Ai~~~ 342 (755)
T TIGR01647 316 ----------------------------------------KDDVLLYAALASRE-------------EDQDAIDTAVLGS 342 (755)
T ss_pred ----------------------------------------HHHHHHHHHHhCCC-------------CCCChHHHHHHHH
Confidence 01345555666521 1369999999998
Q ss_pred HHHcCCEEEeecCceeEEEecCCCCCccceeEeeEeEeecCCCCCceEEEEEEeCC-CeEEEEEeCCchHHHHHhcccch
Q 002029 334 ARELGFEFYERTQTSISVHELDPVTGTKVERSYSLLNVLEFSSSRKRMSVIVRSEE-GTLLLLSKGADSVMFERLAENGR 412 (978)
Q Consensus 334 a~~~g~~~~~r~~~~~~i~~~~~~~~~~~~~~~~il~~~~F~s~rkrmsviv~~~~-~~~~l~~KGa~~~i~~~~~~~~~ 412 (978)
+++.+. ....|+++..+||+|.+|+|+++++.++ |+.++++|||++.|+++|+.. .
T Consensus 343 ~~~~~~----------------------~~~~~~~~~~~pf~~~~k~~~~~v~~~~~g~~~~~~kGa~e~il~~c~~~-~ 399 (755)
T TIGR01647 343 AKDLKE----------------------ARDGYKVLEFVPFDPVDKRTEATVEDPETGKRFKVTKGAPQVILDLCDNK-K 399 (755)
T ss_pred HHHhHH----------------------HHhcCceEEEeccCCCCCeEEEEEEeCCCceEEEEEeCChHHHHHhcCCc-H
Confidence 876430 0245778889999999999999998764 778899999999999999754 2
Q ss_pred hhHHHHHHHHHHHHHccceeEeeEEEeCCHHHHHHHHHHHHHHhhcccccHHHHHHHHHHHhhcccEEEEEEeeccccCC
Q 002029 413 EFEEQTKEHINEYADAGLRTLILAYRELDEKEYKQFNEEFTEAKNSVSADREELAEEIAEKIEKNLILLGATAVEDKLQN 492 (978)
Q Consensus 413 ~~~~~~~~~l~~~a~~Glr~l~~A~r~l~~~e~~~~~~~~~~a~~~l~~~r~~~~~~~~~~ie~dl~llG~i~ieD~lr~ 492 (978)
+..+++.+.+++++.+|+|++++|+|+. |++|+|+|+++++||+|+
T Consensus 400 ~~~~~~~~~~~~~~~~G~rvl~vA~~~~----------------------------------e~~l~~~Gli~l~Dp~R~ 445 (755)
T TIGR01647 400 EIEEKVEEKVDELASRGYRALGVARTDE----------------------------------EGRWHFLGLLPLFDPPRH 445 (755)
T ss_pred HHHHHHHHHHHHHHhCCCEEEEEEEEcC----------------------------------CCCcEEEEEeeccCCChh
Confidence 3566778889999999999999999731 378999999999999999
Q ss_pred ChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCccccCceEEEEecCCCcccccchhhhHHHHHHHHHHHHHHHHHhh
Q 002029 493 GVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQGMRQVIISSETPESKTLEKSEDKSAAAAALKASVLHQLIRG 572 (978)
Q Consensus 493 ~v~~~I~~L~~aGIkv~mlTGD~~~tA~~ia~~~gl~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 572 (978)
+++++|++|+++||+++|+|||+..||.+||+++||..+. ++++.
T Consensus 446 ~a~~aI~~l~~aGI~v~miTGD~~~tA~~IA~~lGI~~~~-----~~~~~------------------------------ 490 (755)
T TIGR01647 446 DTKETIERARHLGVEVKMVTGDHLAIAKETARRLGLGTNI-----YTADV------------------------------ 490 (755)
T ss_pred hHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCCCCC-----cCHHH------------------------------
Confidence 9999999999999999999999999999999999995421 00000
Q ss_pred hhhhccccCCCCCeEEEEcCchhhhhchhhHHHHHHHHHhccCeeEEEeCCchhHHHHHHHHHccCCCeEEEEcCCcCCH
Q 002029 573 KELLDSSNESLGPLALIIDGKSLTYALEDDVKDLFLELAIGCASVICCRSSPKQKALVTRLVKTKTSSTTLAIGDGANDV 652 (978)
Q Consensus 573 ~~~~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~f~~l~~~~~~vi~~r~sP~qK~~iV~~lk~~~~~~v~aiGDG~ND~ 652 (978)
+.+|++++.+.++++.+... . ..+|||++|+||.++|+.+|+ .|++|+|+|||+||+
T Consensus 491 ----------------l~~~~~~~~~~~~~~~~~~~----~--~~vfAr~~Pe~K~~iV~~lq~-~G~~VamvGDGvNDa 547 (755)
T TIGR01647 491 ----------------LLKGDNRDDLPSGELGEMVE----D--ADGFAEVFPEHKYEIVEILQK-RGHLVGMTGDGVNDA 547 (755)
T ss_pred ----------------hcCCcchhhCCHHHHHHHHH----h--CCEEEecCHHHHHHHHHHHHh-cCCEEEEEcCCcccH
Confidence 12222332222333333332 2 239999999999999999998 899999999999999
Q ss_pred HHhhhccccccccCCccchhccccceehhc--hhhhHHHHHHhhhhhhhHhhHhHHHHHHHHHHHHHHHHHHHHhhcccc
Q 002029 653 GMLQEADIGVGISGVEGMQAVMSSDIAIAQ--FRFLERLLLVHGHWCYRRISSMICYFFYKNIAFGFTLFFFEAYASFSG 730 (978)
Q Consensus 653 ~ml~~AdvGI~i~g~e~~~a~~asD~vi~~--f~~l~~lll~~gR~~~~~i~~~i~~~~~~n~~~~~~~~~~~~~~~~s~ 730 (978)
|||++|||||+|++ ....|+++||+++.+ |..+..+ +.+||.+|+|+++++.|.+..|+..++..++..++.+
T Consensus 548 pAL~~AdVGIAm~~-gtdvAkeaADivLl~d~l~~I~~a-i~~gR~~~~ni~k~i~~~~~~n~~~~~~~~~~~l~~~--- 622 (755)
T TIGR01647 548 PALKKADVGIAVAG-ATDAARSAADIVLTEPGLSVIVDA-ILESRKIFQRMKSYVIYRIAETIRIVFFFGLLILILN--- 622 (755)
T ss_pred HHHHhCCeeEEecC-CcHHHHHhCCEEEEcCChHHHHHH-HHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHhC---
Confidence 99999999999953 223389999999998 5558888 8999999999999999999999998877766655443
Q ss_pred ccchhhHHHHHHHHHHhhhhHhhhhccccCCChHHhhhCccchhcccccccccHHHHHHHHHHHHHHHHHHHHHHHHhhc
Q 002029 731 QPVYNDWFLSLYNVFFTSLPVIALGVFDQDVSARFCLKFPLLYQEGVQNILFSWTRILGWALNGVANAAIIFFFCIHAMK 810 (978)
Q Consensus 731 ~~~~~~~~~~~~n~i~~~~p~~~l~~~~~~~~~~~~~~~P~ly~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~ 810 (978)
.+ ++++|++|.|++++. |.+++++++.+++ ++|+ ...++ ..+...+..|++.++..|.++++.+.
T Consensus 623 ~~-l~~~~il~~~l~~d~-~~~~l~~~~~~~~-----~~p~-------~~~~~-~~~~~~~~~g~~~~~~~~~~~~~~~~ 687 (755)
T TIGR01647 623 FY-FPPIMVVIIAILNDG-TIMTIAYDNVKPS-----KLPQ-------RWNLR-EVFTMSTVLGIYLVISTFLLLAIALD 687 (755)
T ss_pred cc-hhHHHHHHHHHHHhH-hHhhccCCCCCCC-----CCCC-------ccchH-HHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 33 899999999999995 7999987654321 2333 22232 44555677888888887777766553
Q ss_pred cccc-cCCCceehhhHHHHHHHHHHHHHHHHHHHH-hhcchhh
Q 002029 811 QQAF-RKGGEVIGLEILGTTMYTCVVWVVNCQMAL-SVTYFTY 851 (978)
Q Consensus 811 ~~~~-~~~g~~~~~~~~~~~~f~~~v~~~~~~~~~-~~~~~~~ 851 (978)
...+ ...+.......+.|++|+.+++.+.+.++. +++...|
T Consensus 688 ~~~~~~~~~~~~~~~~~~t~~f~~~~~~~~~~~~~~r~~~~~~ 730 (755)
T TIGR01647 688 TSFFIDKFGLQLLHGNLQSLIYLQVSISGQATIFVTRTHGFFW 730 (755)
T ss_pred cccchhcccccccHhhhHHHHHHHHHHHHHHHHheeccCCCCc
Confidence 1101 111111123357899999999988887753 3344444
No 18
>KOG0203 consensus Na+/K+ ATPase, alpha subunit [Inorganic ion transport and metabolism]
Probab=100.00 E-value=3e-76 Score=662.63 Aligned_cols=723 Identities=19% Similarity=0.244 Sum_probs=555.0
Q ss_pred cCCcCceeecCceeccCCeEEEEEEEeCccchhcccc---CCCCCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhh
Q 002029 38 PLTPQQLLLRDSKLRNTDCIYGAVIFTGRDTKVFQNS---TGPPSKRSKVERRMDKIIYFLFGILVLMSFIGSIFFGIAT 114 (978)
Q Consensus 38 pl~~~n~l~~Gs~l~~tg~~~gvVv~tG~~Tki~~~~---~~~~~k~s~l~~~~n~~~~~~~~~~~~~~~i~~i~~~~~~ 114 (978)
|++..|+-|.+|.+.+ |.++|+|++||.+|.+++.. ......++|+++.+++++.++..+.+++++..+++....
T Consensus 232 ~~Et~Ni~f~st~~ve-G~~~givi~tGd~Tv~G~ia~l~~~~~~~~t~~~~ei~~fi~~it~vAi~~~i~fF~~~~~~- 309 (1019)
T KOG0203|consen 232 PLETRNIAFFSTNCVE-GTGRGIVIATGDRTVMGRIASLASGLEDGKTPIAKEIEHFIHIITGVAIFLGISFFILALIL- 309 (1019)
T ss_pred chhheeeeeeeeEEec-ceEEEEEEecCCceEEeehhhhhccCCCCCCcchhhhhchHHHHHHHHHHHHHHHHHHHHhh-
Confidence 4567899999999998 99999999999999875543 345677899999999999999888777776665444332
Q ss_pred ccccccccccccccCCCCCCCcCCchhhHHHHHHHHHHHHHHHhccccchhhhhHHHHHHHHHHHHhhccccccccCCCc
Q 002029 115 REDLQDGKMKRWYLRPDDTTAYYDPKRAAVAAVLHFLTALMLYGYLIPISLYVSIEIVKILQSIFINQDLHMYYEETDKP 194 (978)
Q Consensus 115 ~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~iP~sL~v~i~~~~~~~~~~i~~d~~m~~~~~~~~ 194 (978)
++ .| +..+...+.+.++.+|.+|+++++.....-+. +| ++++
T Consensus 310 gy--------~~--------------------l~avv~~i~iivAnvPeGL~~tvTv~Ltltak------rM----a~Kn 351 (1019)
T KOG0203|consen 310 GY--------EW--------------------LRAVVFLIGIIVANVPEGLLATVTVCLTLTAK------RM----ARKN 351 (1019)
T ss_pred cc--------hh--------------------HHHhhhhheeEEecCcCCccceehhhHHHHHH------HH----hhce
Confidence 21 12 33555588889999999999999998888888 67 8999
Q ss_pred ccccCcccccccccceEEEeeCCcccccCeeEEEEEEECCeeeCCCchHHHHHHHhhcCCCCccchhhhhhcccccCCcc
Q 002029 195 ARARTSNLNEELGQVDTILSDKTGTLTCNSMEFIKCSIAGTSYGRGVTEVERAMARRKGSPLEEEVTEEQEDKASIKGFN 274 (978)
Q Consensus 195 ~~~r~~~~~e~Lg~v~~I~sDKTGTLT~n~m~~~~~~i~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 274 (978)
+++|++.++|+||...+||||||||||+|.|+|..+|.++.....+..+. +++.
T Consensus 352 c~vknLeavetlGsts~I~SDktGTlTqnrMtVahlw~d~~i~~~d~~~~------~~~~-------------------- 405 (1019)
T KOG0203|consen 352 CLVKNLEAVETLGSTSTICSDKTGTLTQNRMTVAHLWFDNQIHEADTTED------QSGQ-------------------- 405 (1019)
T ss_pred eEEeeeeheeecccceeEeecceeeEEecceEEEeeccCCceeeeechhh------hhcc--------------------
Confidence 99999999999999999999999999999999999998877544322110 0000
Q ss_pred cCchhhhcCCCCCCCChHHHHHHHHHHhhhcceeccccCCCC--cEEEecCCccHHHHHHHHHHcCCEEEeecCceeEEE
Q 002029 275 FEDERIMNGSWVNEPHADVIQKFLRLLAICHTALPEVDEENG--KISYEAESPDEAAFVIAARELGFEFYERTQTSISVH 352 (978)
Q Consensus 275 ~~~~~l~~~~~~~~~~~~~~~~~~~~lalC~~~~~~~~~~~~--~~~y~~~sp~E~Alv~~a~~~g~~~~~r~~~~~~i~ 352 (978)
.....+.....+.++.++||.+.....+.+- .-.-..+++.|.||++++.-.-...
T Consensus 406 -----------~~~~~~~~~~~l~r~~~lCn~a~~~~gq~dvPv~kk~v~G~~se~ALlk~~e~~~~~~----------- 463 (1019)
T KOG0203|consen 406 -----------SFDKSSATFIALSRIATLCNRAVFKPGQDDVPVLKRDVAGDASEVALLKFIELILGSV----------- 463 (1019)
T ss_pred -----------cccccCchHHHHHHHHHHhCcceecccccCCceeeeeccCCHHHHHHHHHHHHhcchH-----------
Confidence 0011245667899999999999876443221 1122358999999999987542211
Q ss_pred ecCCCCCccceeEeeEeEeecCCCCCceEEEEEEeCC---CeEEEEEeCCchHHHHHhccc---------chhhHHHHHH
Q 002029 353 ELDPVTGTKVERSYSLLNVLEFSSSRKRMSVIVRSEE---GTLLLLSKGADSVMFERLAEN---------GREFEEQTKE 420 (978)
Q Consensus 353 ~~~~~~~~~~~~~~~il~~~~F~s~rkrmsviv~~~~---~~~~l~~KGa~~~i~~~~~~~---------~~~~~~~~~~ 420 (978)
...++.++.+..+||+|++|+.-.+.+.++ .++.+.+|||||.++++|+-. ++...+.+.+
T Consensus 464 -------~~~R~~~~kv~eipfNSt~Kyqlsih~~~d~~~~~~~l~mKGape~il~~CSTi~i~g~e~pld~~~~~~f~~ 536 (1019)
T KOG0203|consen 464 -------MELRERNPKVAEIPFNSTNKYQLSIHETEDPSDPRFLLVMKGAPERILDRCSTILINGEEKPLDEKLKEAFQE 536 (1019)
T ss_pred -------HHHHHhhHHhhcCCcccccceEEEEEecCCCCCccceeeecCChHHHHhhccceeecCCCCCcCHHHHHHHHH
Confidence 113577889999999999999999988764 578999999999999999853 3456778888
Q ss_pred HHHHHHHccceeEeeEEEeCCHHHHHHHHHHHHHHhhcccccHHHHHHHHHHHhhcccEEEEEEeeccccCCChHHHHHH
Q 002029 421 HINEYADAGLRTLILAYRELDEKEYKQFNEEFTEAKNSVSADREELAEEIAEKIEKNLILLGATAVEDKLQNGVPECIDK 500 (978)
Q Consensus 421 ~l~~~a~~Glr~l~~A~r~l~~~e~~~~~~~~~~a~~~l~~~r~~~~~~~~~~ie~dl~llG~i~ieD~lr~~v~~~I~~ 500 (978)
...++...|-||+.||++.++++++.+.-+- +- +..+.--.+|.|+|++++-||+|..+|+++..
T Consensus 537 ay~~lg~~GerVlgF~~~~l~~~~~p~~~~f----------~~-----d~~n~p~~nl~FlGl~s~idPPR~~vP~Av~~ 601 (1019)
T KOG0203|consen 537 AYLELGGLGERVLGFCDLELPDEKFPRGFQF----------DT-----DDVNFPTDNLRFLGLISMIDPPRAAVPDAVGK 601 (1019)
T ss_pred HHHHhhhcchHHHHHHHHhcchhcCCCceEe----------ec-----CCCCCcchhccccchhhccCCCcccCchhhhh
Confidence 8899999999999999999998776432110 00 00012236899999999999999999999999
Q ss_pred HHHcCCeEEEEcCCChhhHHHHHHHcCccccCceEEEEecCCCcccccchhhhHHHHHHHHHHHHHHHHHhhhhhhcccc
Q 002029 501 LAQAGIKLWVLTGDKMETAINIGFACSLLRQGMRQVIISSETPESKTLEKSEDKSAAAAALKASVLHQLIRGKELLDSSN 580 (978)
Q Consensus 501 L~~aGIkv~mlTGD~~~tA~~ia~~~gl~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 580 (978)
||.||||+.|+|||++.||.+||++.||+..+..... .+..+......+.
T Consensus 602 CrsAGIkvimVTgdhpiTAkAiA~~vgIi~~~~et~e--------------------------~~a~r~~~~v~~v---- 651 (1019)
T KOG0203|consen 602 CRSAGIKVIMVTGDHPITAKAIAKSVGIISEGSETVE--------------------------DIAKRLNIPVEQV---- 651 (1019)
T ss_pred hhhhCceEEEEecCccchhhhhhhheeeecCCchhhh--------------------------hhHHhcCCccccc----
Confidence 9999999999999999999999999999876543211 0111111111111
Q ss_pred CCCCCeEEEEcCchhhhhchhhHHHHHHHHHhccCeeEEEeCCchhHHHHHHHHHccCCCeEEEEcCCcCCHHHhhhccc
Q 002029 581 ESLGPLALIIDGKSLTYALEDDVKDLFLELAIGCASVICCRSSPKQKALVTRLVKTKTSSTTLAIGDGANDVGMLQEADI 660 (978)
Q Consensus 581 ~~~~~~~lvi~G~~l~~~~~~~~~~~f~~l~~~~~~vi~~r~sP~qK~~iV~~lk~~~~~~v~aiGDG~ND~~ml~~Adv 660 (978)
+.....+.++.|.+|..+.++++.+ +.....-.||+|.||+||..||+..|+ .|.+|+.+|||+||+||||.|||
T Consensus 652 n~~~a~a~VihG~eL~~~~~~qld~----il~nh~eIVFARTSPqQKLiIVe~cQr-~GaiVaVTGDGVNDsPALKKADI 726 (1019)
T KOG0203|consen 652 NSRDAKAAVIHGSELPDMSSEQLDE----LLQNHQEIVFARTSPQQKLIIVEGCQR-QGAIVAVTGDGVNDSPALKKADI 726 (1019)
T ss_pred CccccceEEEecccccccCHHHHHH----HHHhCCceEEEecCccceEEeEhhhhh-cCcEEEEeCCCcCCChhhccccc
Confidence 2334678999999998777665554 444556689999999999999999998 99999999999999999999999
Q ss_pred cccc--cCCccchhccccceehhchhh--hHHHHHHhhhhhhhHhhHhHHHHHHHHHHHHHHHHHHHHhhccccccc-hh
Q 002029 661 GVGI--SGVEGMQAVMSSDIAIAQFRF--LERLLLVHGHWCYRRISSMICYFFYKNIAFGFTLFFFEAYASFSGQPV-YN 735 (978)
Q Consensus 661 GI~i--~g~e~~~a~~asD~vi~~f~~--l~~lll~~gR~~~~~i~~~i~~~~~~n~~~~~~~~~~~~~~~~s~~~~-~~ 735 (978)
||+| +|++. +++|||++++|++| ++.- +.+||.+|+|++|.|.|.+..|+..+.+.++|.++ |.|+ +.
T Consensus 727 GVAMGiaGSDv--sKqAADmILLDDNFASIVtG-VEEGRLiFDNLKKsIAYTLTsNipEI~PfL~fi~~----giPLplg 799 (1019)
T KOG0203|consen 727 GVAMGIAGSDV--SKQAADMILLDDNFASIVTG-VEEGRLIFDNLKKSIAYTLTSNIPEITPFLLFILF----GIPLPLG 799 (1019)
T ss_pred ceeeccccchH--HHhhcceEEecCcchhheee-cccceehhhhHHHHHHHHHHhcchhHhHHHHHHHh----CCCcccc
Confidence 9965 77777 89999999999776 6656 89999999999999999999999999999888887 5665 88
Q ss_pred hHHHHHHHHHHhhhhHhhhhccccCCChHHhhhCccchhcccccccccHHHH-HHHHHHHHHHHHHHHHHHHHhhccccc
Q 002029 736 DWFLSLYNVFFTSLPVIALGVFDQDVSARFCLKFPLLYQEGVQNILFSWTRI-LGWALNGVANAAIIFFFCIHAMKQQAF 814 (978)
Q Consensus 736 ~~~~~~~n~i~~~~p~~~l~~~~~~~~~~~~~~~P~ly~~~~~~~~~~~~~~-~~~~~~~~~~s~~~~~~~~~~~~~~~~ 814 (978)
.+.++.+.+..+++|++.++++. +..+.|++.|+ .+..+++.|.+.+ +.+...|++|++..|+.++..+...+|
T Consensus 800 titIL~IDLgTDmvPAiSLAYE~--aEsDIM~r~PR---~p~~D~LVN~rLi~~aY~qIG~iqa~agF~tYFvima~nGf 874 (1019)
T KOG0203|consen 800 TVTILCIDLGTDIVPAISLAYEK--AESDIMLRPPR---NPKDDKLVNKRLISYSYLQIGMIQALAGFFTYFVIMAENGF 874 (1019)
T ss_pred hhhhhhhHhhcccchhhhHhccC--chhhHHhcCCC---CCcccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 99999999999999999999863 45555666676 3466788998874 578899999999999988887665444
Q ss_pred ---------------------cCCCceehhh-------HHHHHHHHHHHHHHHHHHHH-hhcchhh----HHHHHHHHHH
Q 002029 815 ---------------------RKGGEVIGLE-------ILGTTMYTCVVWVVNCQMAL-SVTYFTY----IQHLFIWGGI 861 (978)
Q Consensus 815 ---------------------~~~g~~~~~~-------~~~~~~f~~~v~~~~~~~~~-~~~~~~~----~~~~~i~~si 861 (978)
.+.|....+. ...+..|.+++.++-..+++ .+++-+. +.|..+++++
T Consensus 875 ~P~~L~~ir~~W~d~~~~Dl~DsyGQeWtyeqRk~le~tc~taFfvsIvV~Q~adLii~KTRRnSlfqqGmrN~vl~f~v 954 (1019)
T KOG0203|consen 875 LPRTLVGLREDWDDDGVNDLTDSYGQEWTYEQRKYLEYTCYTAFFISIVVVQWADLIICKTRRNSIFQQGMRNKVLIFAV 954 (1019)
T ss_pred ChHHHHhhHHhhhhhhhhhhhhhccccccHHHHHHHHHhhhhheeeeehHHhHhhHHhhhcchhHHHHhhhhhhhHHHHH
Confidence 1223333322 22344444455555554443 2333333 3566777788
Q ss_pred HHHHHHHHHHhccCccccchhHHHHHHHhcCChHHHHHHHHHHHHHHHHHHHHHHHHHhhCC
Q 002029 862 TFWYIFLLAYGAMDPYISTTAYKVFIEACAPAPSFWLITLLVLMSSLLPYFTYSAIQMRFFP 923 (978)
Q Consensus 862 ~~~~i~~~i~~~i~~~~~~~~~~~~~~~~~~s~~~wl~il~~~~~~ll~~~~~k~~~r~~~p 923 (978)
++-.++..++++.|+. .. .++..++-+.+|+..+...++.++.+++.|++.|.+.-
T Consensus 955 ~~e~~La~fl~y~pg~-~~-----~l~~~pl~~~~wl~a~P~~ilIfvydE~Rk~~IR~~P~ 1010 (1019)
T KOG0203|consen 955 IFETCLACFLCYCPGV-LY-----ALGMYPLKFQWWLVAFPFGILIFVYDEVRKLFIRRYPG 1010 (1019)
T ss_pred HHHHHHHHHHhcCccH-HH-----HhccCCCCcEEEEecccceeeeeeHHHHHhHhhhhCCC
Confidence 8877777788888863 22 56677888899999999999999999999999987643
No 19
>KOG0208 consensus Cation transport ATPase [Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.5e-68 Score=609.58 Aligned_cols=645 Identities=21% Similarity=0.278 Sum_probs=443.9
Q ss_pred CceeecCceecc-----CCeEEEEEEEeCccc---hhccccCCCCCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-
Q 002029 42 QQLLLRDSKLRN-----TDCIYGAVIFTGRDT---KVFQNSTGPPSKRSKVERRMDKIIYFLFGILVLMSFIGSIFFGI- 112 (978)
Q Consensus 42 ~n~l~~Gs~l~~-----tg~~~gvVv~tG~~T---ki~~~~~~~~~k~s~l~~~~n~~~~~~~~~~~~~~~i~~i~~~~- 112 (978)
.|.+|.||++.. .+.+.|+|++||..| ++.++.-.++.-..++-+..-+++..+.++ +++.++...+
T Consensus 332 rh~lfcGT~vlq~r~~~g~~v~a~V~RTGF~T~KGqLVRsilyPkP~~fkfyrds~~fi~~l~~i----a~~gfiy~~i~ 407 (1140)
T KOG0208|consen 332 RHTLFCGTKVLQARAYLGGPVLAMVLRTGFSTTKGQLVRSILYPKPVNFKFYRDSFKFILFLVII----ALIGFIYTAIV 407 (1140)
T ss_pred cceeeccceEEEeecCCCCceEEEEEeccccccccHHHHhhcCCCCcccHHHHHHHHHHHHHHHH----HHHHHHHHhHh
Confidence 578999999876 567899999999999 445555555444444555444444333332 3333222222
Q ss_pred --hhccccccccccccccCCCCCCCcCCchhhHHHHHHHHHHHHHHHhccccchhhhhHHHHHHHHHHHHhhcccccccc
Q 002029 113 --ATREDLQDGKMKRWYLRPDDTTAYYDPKRAAVAAVLHFLTALMLYGYLIPISLYVSIEIVKILQSIFINQDLHMYYEE 190 (978)
Q Consensus 113 --~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~iP~sL~v~i~~~~~~~~~~i~~d~~m~~~~ 190 (978)
..+.. .-..+++++.++...+|.+||.++++.....-. ||
T Consensus 408 l~~~g~~----------------------------~~~iiirsLDliTi~VPPALPAaltvG~~~a~~------RL---- 449 (1140)
T KOG0208|consen 408 LNLLGVP----------------------------LKTIIIRSLDLITIVVPPALPAALTVGIIYAQS------RL---- 449 (1140)
T ss_pred HHHcCCC----------------------------HHHHhhhhhcEEEEecCCCchhhhhHHHHHHHH------HH----
Confidence 11111 122688999999999999999999887666555 66
Q ss_pred CCCcccccCcccccccccceEEEeeCCcccccCeeEEEEEEECCeeeCCCchHHHHHHHhhcCCCCccchhhhhhccccc
Q 002029 191 TDKPARARTSNLNEELGQVDTILSDKTGTLTCNSMEFIKCSIAGTSYGRGVTEVERAMARRKGSPLEEEVTEEQEDKASI 270 (978)
Q Consensus 191 ~~~~~~~r~~~~~e~Lg~v~~I~sDKTGTLT~n~m~~~~~~i~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 270 (978)
+++++.|-+++.+...|+++++|||||||||++.+.+..+..-...-.. ..+..... +.+..+
T Consensus 450 kkk~IfCisP~rIn~~G~i~~~cFDKTGTLTEdGLDl~gv~~~~~~~~~-~~~~~~~~--~~~~~~-------------- 512 (1140)
T KOG0208|consen 450 KKKGIFCISPQRINLCGKLNLVCFDKTGTLTEDGLDLWGVVPVERNVDD-GPELKVVT--EDSLQL-------------- 512 (1140)
T ss_pred HhcCeEEcCccceeecceeeEEEEcCCCcccccceeEEEEEeccccccc-cchhhhhh--hhhccc--------------
Confidence 8999999999999999999999999999999999999887652221110 00000000 000000
Q ss_pred CCcccCchhhhcCCCCCCCChHHHHHHHHHHhhhcceeccccCCCCcEEEecCCccHHHHHHHHHHcCCEEEeec-----
Q 002029 271 KGFNFEDERIMNGSWVNEPHADVIQKFLRLLAICHTALPEVDEENGKISYEAESPDEAAFVIAARELGFEFYERT----- 345 (978)
Q Consensus 271 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~lalC~~~~~~~~~~~~~~~y~~~sp~E~Alv~~a~~~g~~~~~r~----- 345 (978)
+ .++. . +........+..++|.||+.....+. ..++|.|.-+.+ ..|+.+.+.+
T Consensus 513 ----~--~~l~----~-~~~~~~~~~~~~a~atCHSL~~v~g~-------l~GDPLdlkmfe---~t~w~~ee~~~~~~~ 571 (1140)
T KOG0208|consen 513 ----F--YKLS----L-RSSSLPMGNLVAAMATCHSLTLVDGT-------LVGDPLDLKMFE---STGWVYEEADIEDEA 571 (1140)
T ss_pred ----e--eecc----c-cccCCchHHHHHHHhhhceeEEeCCe-------eccCceeeeeee---ccceEEEeccccchh
Confidence 0 0000 0 01111234688999999988764322 236888877654 3566664421
Q ss_pred ---Cce---eEEEecC---CCCCccceeEeeEeEeecCCCCCceEEEEEEeC-CCeEEEEEeCCchHHHHHhcccchhhH
Q 002029 346 ---QTS---ISVHELD---PVTGTKVERSYSLLNVLEFSSSRKRMSVIVRSE-EGTLLLLSKGADSVMFERLAENGREFE 415 (978)
Q Consensus 346 ---~~~---~~i~~~~---~~~~~~~~~~~~il~~~~F~s~rkrmsviv~~~-~~~~~l~~KGa~~~i~~~~~~~~~~~~ 415 (978)
.+. ..++... +.+....+..+-+++.+||+|.-+||||||+++ +.+..+|+|||||.|.+.|+++ ..+
T Consensus 572 ~~~~~~~~p~v~~p~~~~~~~~t~~~~~~~si~k~feF~S~LrRMSVIv~~~~e~~~~~ftKGaPE~I~~ic~p~--tvP 649 (1140)
T KOG0208|consen 572 TREFNTLIPTVVRPPENAFNQSTECGEGEISIVKQFEFSSALRRMSVIVSTGGEDKMMVFTKGAPESIAEICKPE--TVP 649 (1140)
T ss_pred hhhhCCccCCEeCCCcccccCCCcCCCcceEEEEecccchhhheEEEEEecCCCCceEeeccCCHHHHHHhcCcc--cCC
Confidence 011 1122211 111111223799999999999999999999987 4678999999999999999876 467
Q ss_pred HHHHHHHHHHHHccceeEeeEEEeCCHHHHHHHHHHHHHHhhcccccHHHHHHHHHHHhhcccEEEEEEeeccccCCChH
Q 002029 416 EQTKEHINEYADAGLRTLILAYRELDEKEYKQFNEEFTEAKNSVSADREELAEEIAEKIEKNLILLGATAVEDKLQNGVP 495 (978)
Q Consensus 416 ~~~~~~l~~~a~~Glr~l~~A~r~l~~~e~~~~~~~~~~a~~~l~~~r~~~~~~~~~~ie~dl~llG~i~ieD~lr~~v~ 495 (978)
+++.+.++.|+.+|+|++++|+|.++.. .|.+ | .+..++.+|.||+|+|++.+|++||++++
T Consensus 650 ~dy~evl~~Yt~~GfRVIAlA~K~L~~~---~~~~----~-----------~~~~Rd~vEs~l~FlGLiVmeNkLK~~T~ 711 (1140)
T KOG0208|consen 650 ADYQEVLKEYTHQGFRVIALASKELETS---TLQK----A-----------QKLSRDTVESNLEFLGLIVMENKLKEETK 711 (1140)
T ss_pred ccHHHHHHHHHhCCeEEEEEecCccCcc---hHHH----H-----------hhccHhhhhccceeeEEEEeecccccccH
Confidence 7889999999999999999999999875 2322 1 12234788999999999999999999999
Q ss_pred HHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCccccCceEEEEecCCCccccc-----chhhhHHHHHHHHHHHHHHHHH
Q 002029 496 ECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQGMRQVIISSETPESKTL-----EKSEDKSAAAAALKASVLHQLI 570 (978)
Q Consensus 496 ~~I~~L~~aGIkv~mlTGD~~~tA~~ia~~~gl~~~~~~~i~i~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~ 570 (978)
.+|++|++|+|+++|+|||+..||+.+|++||++.+....+....+..+.... ...+....... .++..
T Consensus 712 ~VI~eL~~AnIRtVMcTGDNllTaisVakeCgmi~p~~~v~~~~~~~~~~~~~~~i~w~~ve~~~~~~~------~~~~~ 785 (1140)
T KOG0208|consen 712 RVIDELNRANIRTVMCTGDNLLTAISVAKECGMIEPQVKVIIPELEPPEDDSIAQIVWLCVESQTQFLD------PKEPD 785 (1140)
T ss_pred HHHHHHHhhcceEEEEcCCchheeeehhhcccccCCCCeEEEEeccCCccCCCceeEEEEccCccccCC------CCccC
Confidence 99999999999999999999999999999999999987777665542221110 00000000000 00000
Q ss_pred hhhhhhc--cccCCCCCeEEEEcCchhhhhchhhHHHHHHHHHhccCeeEEEeCCchhHHHHHHHHHccCCCeEEEEcCC
Q 002029 571 RGKELLD--SSNESLGPLALIIDGKSLTYALEDDVKDLFLELAIGCASVICCRSSPKQKALVTRLVKTKTSSTTLAIGDG 648 (978)
Q Consensus 571 ~~~~~~~--~~~~~~~~~~lvi~G~~l~~~~~~~~~~~f~~l~~~~~~vi~~r~sP~qK~~iV~~lk~~~~~~v~aiGDG 648 (978)
......+ .+......+.+.++|++++.+. ....+.+.+++.++. |||||+|.||+++|..+|+ .|..|+|+|||
T Consensus 786 ~~~~~~~~~~d~~~~~~yhlA~sG~~f~~i~-~~~~~l~~~Il~~~~--VfARMsP~qK~~Lie~lQk-l~y~VgfCGDG 861 (1140)
T KOG0208|consen 786 PDLASVKLSLDVLSEKDYHLAMSGKTFQVIL-EHFPELVPKILLKGT--VFARMSPDQKAELIEALQK-LGYKVGFCGDG 861 (1140)
T ss_pred ccccCCccChhhhccceeEEEecCchhHHHH-hhcHHHHHHHHhcCe--EEeecCchhHHHHHHHHHh-cCcEEEecCCC
Confidence 0000000 0111345689999999999888 456667777777666 9999999999999999998 99999999999
Q ss_pred cCCHHHhhhccccccccCCccchhccccceehh--chhhhHHHHHHhhhhhhhHhhHhHHHHHHHHHHHHHHHHHHHHhh
Q 002029 649 ANDVGMLQEADIGVGISGVEGMQAVMSSDIAIA--QFRFLERLLLVHGHWCYRRISSMICYFFYKNIAFGFTLFFFEAYA 726 (978)
Q Consensus 649 ~ND~~ml~~AdvGI~i~g~e~~~a~~asD~vi~--~f~~l~~lll~~gR~~~~~i~~~i~~~~~~n~~~~~~~~~~~~~~ 726 (978)
+|||.||++|||||+++.+| |.-||.|.-. +-+....+ +.+||..+..--..++|+-.+.+ ++|...++.
T Consensus 862 ANDCgALKaAdvGISLSeaE---ASvAApFTSk~~~I~cVp~v-IrEGRaALVTSf~~FkYMalYs~----iqFisv~~L 933 (1140)
T KOG0208|consen 862 ANDCGALKAADVGISLSEAE---ASVAAPFTSKTPSISCVPDV-IREGRAALVTSFACFKYMALYSA----IQFISVVFL 933 (1140)
T ss_pred cchhhhhhhcccCcchhhhh---HhhcCccccCCCchhhHhHH-HhhhhhhhhhhHHHHHHHHHHHH----HHHHhhhee
Confidence 99999999999999998887 7789999988 45556666 89999998877777777644432 333333222
Q ss_pred ccccccchhhHHHHHHHHHHhhhhHhhhhccccCCChHHhhhCccchhcccccccccHHHHHHHHHHHHHHHHHHHHHHH
Q 002029 727 SFSGQPVYNDWFLSLYNVFFTSLPVIALGVFDQDVSARFCLKFPLLYQEGVQNILFSWTRILGWALNGVANAAIIFFFCI 806 (978)
Q Consensus 727 ~~s~~~~~~~~~~~~~n~i~~~~p~~~l~~~~~~~~~~~~~~~P~ly~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~ 806 (978)
.+ -...+++.|.+...++....-+++++.++ +..+....+|. ..+++.+.+...+++.++..++-+.+++
T Consensus 934 Y~-~~~nl~D~Qfl~iDLlii~pia~~m~~~~--a~~~L~~~rP~-------~~L~s~~~~~~l~~q~vli~l~q~i~~l 1003 (1140)
T KOG0208|consen 934 YL-INSNLGDLQFLFIDLLIITPIAVMMSRFD--ASDKLFPKRPP-------TNLLSKKILVPLLLQIVLICLVQWILTL 1003 (1140)
T ss_pred ee-ecccccchhhhhhHHHHHHHHHHHHccCc--HHHHhcCCCCC-------ccccccchhhhhHHHHHHHHHHHHhhhe
Confidence 22 33458899999999988755556665543 55444444443 5678888887777777777777776666
Q ss_pred Hhhccccc
Q 002029 807 HAMKQQAF 814 (978)
Q Consensus 807 ~~~~~~~~ 814 (978)
..-..+++
T Consensus 1004 ~~~~qpw~ 1011 (1140)
T KOG0208|consen 1004 IVEPQPWY 1011 (1140)
T ss_pred eeccccce
Confidence 65444443
No 20
>PRK14010 potassium-transporting ATPase subunit B; Provisional
Probab=100.00 E-value=4.5e-61 Score=565.28 Aligned_cols=479 Identities=18% Similarity=0.220 Sum_probs=357.6
Q ss_pred EEEEEEC-----CccccC--CcC---ceeecCceeccCCeEEEEEEEeCccchh---ccccCCCCCCcCHHHHHHHHHHH
Q 002029 27 VGSLELE-----EQQYPL--TPQ---QLLLRDSKLRNTDCIYGAVIFTGRDTKV---FQNSTGPPSKRSKVERRMDKIIY 93 (978)
Q Consensus 27 ~G~~~~~-----~~~~pl--~~~---n~l~~Gs~l~~tg~~~gvVv~tG~~Tki---~~~~~~~~~k~s~l~~~~n~~~~ 93 (978)
+|...+| ||+.|+ +.+ +-+++||.+.+ |++.++|+.||.+|.+ ....+.++.++||+|..++.+..
T Consensus 145 eG~~~VDESaLTGES~PV~K~~g~d~~~V~aGT~v~~-G~~~i~Vta~g~~T~lgki~~lve~a~~~ktp~e~~l~~l~~ 223 (673)
T PRK14010 145 KGLATVDESAITGESAPVIKESGGDFDNVIGGTSVAS-DWLEVEITSEPGHSFLDKMIGLVEGATRKKTPNEIALFTLLM 223 (673)
T ss_pred EcceEEecchhcCCCCceeccCCCccCeeecCceeec-ceEEEEEEEecccCHHHHHHHHHhhccccCCHHHHHHHHHHH
Confidence 4555554 899998 333 56999999997 9999999999999965 44456677788999988776654
Q ss_pred HHHHHHHHHHHHHHHHHHhhhccccccccccccccCCCCCCCcCCchhhHHHHHHHHHHHHHHHhccccchhhhhHHHHH
Q 002029 94 FLFGILVLMSFIGSIFFGIATREDLQDGKMKRWYLRPDDTTAYYDPKRAAVAAVLHFLTALMLYGYLIPISLYVSIEIVK 173 (978)
Q Consensus 94 ~~~~~~~~~~~i~~i~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~iP~sL~v~i~~~~ 173 (978)
.+.++.++++ . +.++... |. .....+...+++.+++||++|+..++++.
T Consensus 224 ~l~ii~l~~~--~---~~~~~~~----------~~----------------~~~~~~~~~val~V~~IP~aL~~~~~~~~ 272 (673)
T PRK14010 224 TLTIIFLVVI--L---TMYPLAK----------FL----------------NFNLSIAMLIALAVCLIPTTIGGLLSAIG 272 (673)
T ss_pred HHhHHHHHHH--H---HHHHHHh----------hc----------------cHHHHHHHHHHHHHHhhhhhHHHHHHHHH
Confidence 4433222111 1 1110000 00 00114556677777889999999888887
Q ss_pred HHHHHHHhhccccccccCCCcccccCcccccccccceEEEeeCCcccccCeeEEEEEEECCeeeCCCchHHHHHHHhhcC
Q 002029 174 ILQSIFINQDLHMYYEETDKPARARTSNLNEELGQVDTILSDKTGTLTCNSMEFIKCSIAGTSYGRGVTEVERAMARRKG 253 (978)
Q Consensus 174 ~~~~~~i~~d~~m~~~~~~~~~~~r~~~~~e~Lg~v~~I~sDKTGTLT~n~m~~~~~~i~~~~y~~~~~~~~~~~~~~~~ 253 (978)
..++. +| +++++++|+.+.+|.||++|+||+|||||||+|++.+.++...+.
T Consensus 273 ~~g~~------r~----ak~gvLvk~~~avE~lg~v~vI~~DKTGTLT~Gn~~~~~~~~~~~------------------ 324 (673)
T PRK14010 273 IAGMD------RV----TQFNILAKSGRSVETCGDVNVLILDKTGTITYGNRMADAFIPVKS------------------ 324 (673)
T ss_pred HHHHH------HH----hhCCEEEeCcHHHHHhhCCCEEEEeCCCcCCCCCeEEEEEEeCCC------------------
Confidence 77777 67 899999999999999999999999999999997766655431100
Q ss_pred CCCccchhhhhhcccccCCcccCchhhhcCCCCCCCChHHHHHHHHHHhhhcceeccccCCCCcEEEecCCccHHHHHHH
Q 002029 254 SPLEEEVTEEQEDKASIKGFNFEDERIMNGSWVNEPHADVIQKFLRLLAICHTALPEVDEENGKISYEAESPDEAAFVIA 333 (978)
Q Consensus 254 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~lalC~~~~~~~~~~~~~~~y~~~sp~E~Alv~~ 333 (978)
...++++.+.++|+.. +.||.+.|++++
T Consensus 325 --------------------------------------~~~~~ll~~a~~~~~~--------------s~~P~~~AIv~~ 352 (673)
T PRK14010 325 --------------------------------------SSFERLVKAAYESSIA--------------DDTPEGRSIVKL 352 (673)
T ss_pred --------------------------------------ccHHHHHHHHHHhcCC--------------CCChHHHHHHHH
Confidence 0112456666777632 249999999999
Q ss_pred HHHcCCEEEeecCceeEEEecCCCCCccceeEeeEeEeecCCCCCceEEEEEEeCCCeEEEEEeCCchHHHHHhcccchh
Q 002029 334 ARELGFEFYERTQTSISVHELDPVTGTKVERSYSLLNVLEFSSSRKRMSVIVRSEEGTLLLLSKGADSVMFERLAENGRE 413 (978)
Q Consensus 334 a~~~g~~~~~r~~~~~~i~~~~~~~~~~~~~~~~il~~~~F~s~rkrmsviv~~~~~~~~l~~KGa~~~i~~~~~~~~~~ 413 (978)
+++.|+.... .....+||++++|+|++.++ ++ .+.|||++.++++|...+..
T Consensus 353 a~~~~~~~~~-----------------------~~~~~~pF~~~~k~~gv~~~---g~--~i~kGa~~~il~~~~~~g~~ 404 (673)
T PRK14010 353 AYKQHIDLPQ-----------------------EVGEYIPFTAETRMSGVKFT---TR--EVYKGAPNSMVKRVKEAGGH 404 (673)
T ss_pred HHHcCCCchh-----------------------hhcceeccccccceeEEEEC---CE--EEEECCHHHHHHHhhhcCCC
Confidence 9987653210 01123799999999999753 33 45599999999999865433
Q ss_pred hHHHHHHHHHHHHHccceeEeeEEEeCCHHHHHHHHHHHHHHhhcccccHHHHHHHHHHHhhcccEEEEEEeeccccCCC
Q 002029 414 FEEQTKEHINEYADAGLRTLILAYRELDEKEYKQFNEEFTEAKNSVSADREELAEEIAEKIEKNLILLGATAVEDKLQNG 493 (978)
Q Consensus 414 ~~~~~~~~l~~~a~~Glr~l~~A~r~l~~~e~~~~~~~~~~a~~~l~~~r~~~~~~~~~~ie~dl~llG~i~ieD~lr~~ 493 (978)
...++.+..++++++|+|+++++ .|++++|+++++||+|+|
T Consensus 405 ~~~~~~~~~~~~a~~G~~~l~v~---------------------------------------~~~~~lG~i~l~Dp~R~~ 445 (673)
T PRK14010 405 IPVDLDALVKGVSKKGGTPLVVL---------------------------------------EDNEILGVIYLKDVIKDG 445 (673)
T ss_pred CchHHHHHHHHHHhCCCeEEEEE---------------------------------------ECCEEEEEEEeecCCcHH
Confidence 34456677788999999999987 477899999999999999
Q ss_pred hHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCccccCceEEEEecCCCcccccchhhhHHHHHHHHHHHHHHHHHhhh
Q 002029 494 VPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQGMRQVIISSETPESKTLEKSEDKSAAAAALKASVLHQLIRGK 573 (978)
Q Consensus 494 v~~~I~~L~~aGIkv~mlTGD~~~tA~~ia~~~gl~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 573 (978)
++++|++||++||+++|+|||+..||.+||+++|+..
T Consensus 446 a~e~I~~Lr~~GI~vvMiTGDn~~TA~aIA~elGI~~------------------------------------------- 482 (673)
T PRK14010 446 LVERFRELREMGIETVMCTGDNELTAATIAKEAGVDR------------------------------------------- 482 (673)
T ss_pred HHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCce-------------------------------------------
Confidence 9999999999999999999999999999999999831
Q ss_pred hhhccccCCCCCeEEEEcCchhhhhchhhHHHHHHHHHhccCeeEEEeCCchhHHHHHHHHHccCCCeEEEEcCCcCCHH
Q 002029 574 ELLDSSNESLGPLALIIDGKSLTYALEDDVKDLFLELAIGCASVICCRSSPKQKALVTRLVKTKTSSTTLAIGDGANDVG 653 (978)
Q Consensus 574 ~~~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~f~~l~~~~~~vi~~r~sP~qK~~iV~~lk~~~~~~v~aiGDG~ND~~ 653 (978)
+++|++|+||.++|+.+|+ .|++|+|+|||.||+|
T Consensus 483 --------------------------------------------v~A~~~PedK~~iV~~lQ~-~G~~VaMtGDGvNDAP 517 (673)
T PRK14010 483 --------------------------------------------FVAECKPEDKINVIREEQA-KGHIVAMTGDGTNDAP 517 (673)
T ss_pred --------------------------------------------EEcCCCHHHHHHHHHHHHh-CCCEEEEECCChhhHH
Confidence 8999999999999999998 8999999999999999
Q ss_pred Hhhhcccccccc-CCccchhccccceehhc--hhhhHHHHHHhhhhhhhHhhHhHHHHHHHHHHHHHHHHHHHHhhcccc
Q 002029 654 MLQEADIGVGIS-GVEGMQAVMSSDIAIAQ--FRFLERLLLVHGHWCYRRISSMICYFFYKNIAFGFTLFFFEAYASFSG 730 (978)
Q Consensus 654 ml~~AdvGI~i~-g~e~~~a~~asD~vi~~--f~~l~~lll~~gR~~~~~i~~~i~~~~~~n~~~~~~~~~~~~~~~~s~ 730 (978)
+|++|||||+|+ |++. |+++||+++.| |..+..+ +.+||..|.|+++++.|.+..|+...+..+...|...+-+
T Consensus 518 ALa~ADVGIAMgsGTdv--AkeAADiVLldd~ls~Iv~a-v~~gR~i~~n~~~~~~f~~~~~~~~~~~i~~a~~~~~~~~ 594 (673)
T PRK14010 518 ALAEANVGLAMNSGTMS--AKEAANLIDLDSNPTKLMEV-VLIGKQLLMTRGSLTTFSIANDIAKYFAILPAMFMAAMPA 594 (673)
T ss_pred HHHhCCEEEEeCCCCHH--HHHhCCEEEcCCCHHHHHHH-HHHHHHHHHHHHHHHheeeeccHHHHHHHHHHHHHHhccc
Confidence 999999999994 4444 99999999998 4458888 8999999999999999999999998887776555433322
Q ss_pred ccchh---------h-HHHHHHHHHHh--hhhHhhhhccccCCChHHhhhC-ccchhc
Q 002029 731 QPVYN---------D-WFLSLYNVFFT--SLPVIALGVFDQDVSARFCLKF-PLLYQE 775 (978)
Q Consensus 731 ~~~~~---------~-~~~~~~n~i~~--~~p~~~l~~~~~~~~~~~~~~~-P~ly~~ 775 (978)
...++ . ..-+.||.+.. .+|.-.-|+..++.+...++++ =-.|..
T Consensus 595 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 652 (673)
T PRK14010 595 MNHLNIMHLHSPESAVLSALIFNALIIVLLIPIAMKGVKFKGASTQTILMKNMLVYGL 652 (673)
T ss_pred chhhccccCCChHHHHHHHHHHHHHHHHHHHHHHhcCcccccCCHHHHHhhCeEEecc
Confidence 11121 1 12245565432 2344444555555555554443 334433
No 21
>PRK01122 potassium-transporting ATPase subunit B; Provisional
Probab=100.00 E-value=3.3e-59 Score=549.96 Aligned_cols=483 Identities=19% Similarity=0.249 Sum_probs=358.4
Q ss_pred EEEEEEC-----CccccC--CcCce---eecCceeccCCeEEEEEEEeCccchh---ccccCCCCCCcCHHHHHHHHHHH
Q 002029 27 VGSLELE-----EQQYPL--TPQQL---LLRDSKLRNTDCIYGAVIFTGRDTKV---FQNSTGPPSKRSKVERRMDKIIY 93 (978)
Q Consensus 27 ~G~~~~~-----~~~~pl--~~~n~---l~~Gs~l~~tg~~~gvVv~tG~~Tki---~~~~~~~~~k~s~l~~~~n~~~~ 93 (978)
+|...+| ||+.|+ +.+.- +++||.+.+ |++.+.|+.+|.+|.+ ....+.++.++||+|+.++.+..
T Consensus 145 eG~a~VDESaLTGES~PV~K~~G~~~~~V~aGT~v~~-G~~~i~Vta~g~~S~lgki~~lve~a~~~ktp~e~al~~l~~ 223 (679)
T PRK01122 145 EGVASVDESAITGESAPVIRESGGDFSSVTGGTRVLS-DWIVIRITANPGESFLDRMIALVEGAKRQKTPNEIALTILLA 223 (679)
T ss_pred EccEEEEcccccCCCCceEeCCCCccCeEEeceEEEe-eeEEEEEEEecccCHHHHHHHHHHhccccCCHHHHHHHHHHH
Confidence 4555554 899998 33333 999999997 9999999999999965 44455667778999999888776
Q ss_pred HHHHHHHHHHHHHHHHHHhhhccccccccccccccCCCCCCCcCCchhhHHHHHHHHHHHHHHHhccccchhhhhHHHHH
Q 002029 94 FLFGILVLMSFIGSIFFGIATREDLQDGKMKRWYLRPDDTTAYYDPKRAAVAAVLHFLTALMLYGYLIPISLYVSIEIVK 173 (978)
Q Consensus 94 ~~~~~~~~~~~i~~i~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~iP~sL~v~i~~~~ 173 (978)
.++.+.++++++...+ ..|.+. . ..+...+++++++||++|+..++.+.
T Consensus 224 ~l~~i~l~~~~~~~~~-~~~~g~--------~----------------------~~l~~~iallV~aiP~alg~l~~~i~ 272 (679)
T PRK01122 224 GLTIIFLLVVATLPPF-AAYSGG--------A----------------------LSITVLVALLVCLIPTTIGGLLSAIG 272 (679)
T ss_pred hhhHHHHHHHHHHHHH-HHHhCc--------h----------------------HHHHHHHHHHHHcccchhhhHHHHHH
Confidence 6655444333322221 111110 0 15677789999999999988888777
Q ss_pred HHHHHHHhhccccccccCCCcccccCcccccccccceEEEeeCCcccccCeeEEEEEEECCeeeCCCchHHHHHHHhhcC
Q 002029 174 ILQSIFINQDLHMYYEETDKPARARTSNLNEELGQVDTILSDKTGTLTCNSMEFIKCSIAGTSYGRGVTEVERAMARRKG 253 (978)
Q Consensus 174 ~~~~~~i~~d~~m~~~~~~~~~~~r~~~~~e~Lg~v~~I~sDKTGTLT~n~m~~~~~~i~~~~y~~~~~~~~~~~~~~~~ 253 (978)
..++. +| .++++++|+.+++|.||++|+||+|||||||+|+|++.+++..+..
T Consensus 273 i~g~~------r~----ak~gvLvk~~~avE~lg~v~~I~~DKTGTLT~g~~~v~~~~~~~~~----------------- 325 (679)
T PRK01122 273 IAGMD------RV----LQANVIATSGRAVEAAGDVDTLLLDKTGTITLGNRQASEFLPVPGV----------------- 325 (679)
T ss_pred HHHHH------HH----hcCCeeecCchHHHHhcCCCEEEEeCCCCCcCCcEEEEEEEeCCCC-----------------
Confidence 76666 66 8999999999999999999999999999999999999887532110
Q ss_pred CCCccchhhhhhcccccCCcccCchhhhcCCCCCCCChHHHHHHHHHHhhhcceeccccCCCCcEEEecCCccHHHHHHH
Q 002029 254 SPLEEEVTEEQEDKASIKGFNFEDERIMNGSWVNEPHADVIQKFLRLLAICHTALPEVDEENGKISYEAESPDEAAFVIA 333 (978)
Q Consensus 254 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~lalC~~~~~~~~~~~~~~~y~~~sp~E~Alv~~ 333 (978)
. .++++.+.++|+.. +.||...|++++
T Consensus 326 ------------------------------------~---~~~ll~~a~~~s~~--------------s~hP~~~AIv~~ 352 (679)
T PRK01122 326 ------------------------------------T---EEELADAAQLSSLA--------------DETPEGRSIVVL 352 (679)
T ss_pred ------------------------------------C---HHHHHHHHHHhcCC--------------CCCchHHHHHHH
Confidence 0 12456666777543 247999999999
Q ss_pred HHH-cCCEEEeecCceeEEEecCCCCCccceeEeeEeEeecCCCCCceEEEEEEeCCCeEEEEEeCCchHHHHHhcccch
Q 002029 334 ARE-LGFEFYERTQTSISVHELDPVTGTKVERSYSLLNVLEFSSSRKRMSVIVRSEEGTLLLLSKGADSVMFERLAENGR 412 (978)
Q Consensus 334 a~~-~g~~~~~r~~~~~~i~~~~~~~~~~~~~~~~il~~~~F~s~rkrmsviv~~~~~~~~l~~KGa~~~i~~~~~~~~~ 412 (978)
|++ .|+... +..++....+||++.+|+|++.+. | ..|+|||++.|++.|...+.
T Consensus 353 a~~~~~~~~~--------------------~~~~~~~~~~pF~s~~~~~gv~~~---g--~~~~kGa~e~il~~~~~~g~ 407 (679)
T PRK01122 353 AKQRFNLRER--------------------DLQSLHATFVPFSAQTRMSGVDLD---G--REIRKGAVDAIRRYVESNGG 407 (679)
T ss_pred HHhhcCCCch--------------------hhccccceeEeecCcCceEEEEEC---C--EEEEECCHHHHHHHHHhcCC
Confidence 987 343211 122456678899999998888653 3 57899999999999976554
Q ss_pred hhHHHHHHHHHHHHHccceeEeeEEEeCCHHHHHHHHHHHHHHhhcccccHHHHHHHHHHHhhcccEEEEEEeeccccCC
Q 002029 413 EFEEQTKEHINEYADAGLRTLILAYRELDEKEYKQFNEEFTEAKNSVSADREELAEEIAEKIEKNLILLGATAVEDKLQN 492 (978)
Q Consensus 413 ~~~~~~~~~l~~~a~~Glr~l~~A~r~l~~~e~~~~~~~~~~a~~~l~~~r~~~~~~~~~~ie~dl~llG~i~ieD~lr~ 492 (978)
...+++.+.+++++++|+|++++| .|++++|+++++|++|+
T Consensus 408 ~~~~~~~~~~~~~a~~G~~~l~va---------------------------------------~~~~~lG~i~l~D~~R~ 448 (679)
T PRK01122 408 HFPAELDAAVDEVARKGGTPLVVA---------------------------------------EDNRVLGVIYLKDIVKP 448 (679)
T ss_pred cChHHHHHHHHHHHhCCCcEEEEE---------------------------------------ECCeEEEEEEEeccCch
Confidence 556778888899999999999999 36789999999999999
Q ss_pred ChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCccccCceEEEEecCCCcccccchhhhHHHHHHHHHHHHHHHHHhh
Q 002029 493 GVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQGMRQVIISSETPESKTLEKSEDKSAAAAALKASVLHQLIRG 572 (978)
Q Consensus 493 ~v~~~I~~L~~aGIkv~mlTGD~~~tA~~ia~~~gl~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 572 (978)
|++++|++||++||+++|+|||+..||.+||+++|+..
T Consensus 449 ~~~eai~~Lr~~GI~vvMiTGDn~~TA~aIA~elGId~------------------------------------------ 486 (679)
T PRK01122 449 GIKERFAELRKMGIKTVMITGDNPLTAAAIAAEAGVDD------------------------------------------ 486 (679)
T ss_pred hHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCcE------------------------------------------
Confidence 99999999999999999999999999999999999821
Q ss_pred hhhhccccCCCCCeEEEEcCchhhhhchhhHHHHHHHHHhccCeeEEEeCCchhHHHHHHHHHccCCCeEEEEcCCcCCH
Q 002029 573 KELLDSSNESLGPLALIIDGKSLTYALEDDVKDLFLELAIGCASVICCRSSPKQKALVTRLVKTKTSSTTLAIGDGANDV 652 (978)
Q Consensus 573 ~~~~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~f~~l~~~~~~vi~~r~sP~qK~~iV~~lk~~~~~~v~aiGDG~ND~ 652 (978)
+++|++|+||.++|+.+|+ .|+.|+|+|||.||+
T Consensus 487 ---------------------------------------------v~A~~~PedK~~iV~~lQ~-~G~~VaMtGDGvNDA 520 (679)
T PRK01122 487 ---------------------------------------------FLAEATPEDKLALIRQEQA-EGRLVAMTGDGTNDA 520 (679)
T ss_pred ---------------------------------------------EEccCCHHHHHHHHHHHHH-cCCeEEEECCCcchH
Confidence 8999999999999999998 899999999999999
Q ss_pred HHhhhcccccccc-CCccchhccccceehhc--hhhhHHHHHHhhhhhhhHhhHhHHHHHHHHHHH---HHHHHHHHHhh
Q 002029 653 GMLQEADIGVGIS-GVEGMQAVMSSDIAIAQ--FRFLERLLLVHGHWCYRRISSMICYFFYKNIAF---GFTLFFFEAYA 726 (978)
Q Consensus 653 ~ml~~AdvGI~i~-g~e~~~a~~asD~vi~~--f~~l~~lll~~gR~~~~~i~~~i~~~~~~n~~~---~~~~~~~~~~~ 726 (978)
|||++|||||+|. |++. |+++||+++.| |..+..+ +.+||...-.-..+..|++..-++- +++.++...+.
T Consensus 521 PALa~ADVGIAMgsGTdv--AkeAADiVLldd~~s~Iv~a-v~~GR~~~~tr~~~~~f~~~n~~~~~~~i~p~~~~~~~~ 597 (679)
T PRK01122 521 PALAQADVGVAMNSGTQA--AKEAGNMVDLDSNPTKLIEV-VEIGKQLLMTRGALTTFSIANDVAKYFAIIPAMFAATYP 597 (679)
T ss_pred HHHHhCCEeEEeCCCCHH--HHHhCCEEEeCCCHHHHHHH-HHHHHHHHhhhHhhhhhhHHHHHHHHHHHHHHHHHhhCc
Confidence 9999999999994 3444 89999999998 4458888 8999999865555667776644543 33334433333
Q ss_pred cccc------ccchhh-HHHHHHHHHHh--hhhHhhhhccccCCChHHhhhC-ccchhcc
Q 002029 727 SFSG------QPVYND-WFLSLYNVFFT--SLPVIALGVFDQDVSARFCLKF-PLLYQEG 776 (978)
Q Consensus 727 ~~s~------~~~~~~-~~~~~~n~i~~--~~p~~~l~~~~~~~~~~~~~~~-P~ly~~~ 776 (978)
+... .+|.+. ..-+.||.+.. .+|.-.-|+-.++.+...++++ =-.|..|
T Consensus 598 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 657 (679)
T PRK01122 598 QLNALNIMHLHSPQSAILSALIFNALIIVALIPLALKGVKYRPLSAAALLRRNLLIYGLG 657 (679)
T ss_pred cccccccccCCChHHHHHHHHHHHHHHHHHhHHHHhcCccccccCHHHHHhhceeEecCC
Confidence 2111 111111 22245665432 2344444555556665554443 3344433
No 22
>TIGR01497 kdpB K+-transporting ATPase, B subunit. One sequence is apparently mis-annotated in the primary literature, but properly annotated by TIGR.
Probab=100.00 E-value=2.5e-56 Score=524.18 Aligned_cols=433 Identities=18% Similarity=0.229 Sum_probs=337.8
Q ss_pred EEEEEEC-----CccccC--CcCc---eeecCceeccCCeEEEEEEEeCccchh---ccccCCCCCCcCHHHHHHHHHHH
Q 002029 27 VGSLELE-----EQQYPL--TPQQ---LLLRDSKLRNTDCIYGAVIFTGRDTKV---FQNSTGPPSKRSKVERRMDKIIY 93 (978)
Q Consensus 27 ~G~~~~~-----~~~~pl--~~~n---~l~~Gs~l~~tg~~~gvVv~tG~~Tki---~~~~~~~~~k~s~l~~~~n~~~~ 93 (978)
+|...+| ||+.|+ +.+. .+++||.+.+ |++.+.|+.+|.+|.+ ....+.++.++||+|..++.+..
T Consensus 146 eG~~~VDESaLTGES~PV~K~~g~~~~~V~aGT~v~~-G~~~i~Vt~~g~~S~lgri~~lve~a~~~ktplq~~l~~l~~ 224 (675)
T TIGR01497 146 EGVASVDESAITGESAPVIKESGGDFASVTGGTRILS-DWLVVECTANPGETFLDRMIALVEGAQRRKTPNEIALTILLI 224 (675)
T ss_pred EccEEEEcccccCCCCceeecCCCCcceeecCcEEEe-eEEEEEEEEecccCHHHHHHHHHHhcccCCChHHHHHHHHHH
Confidence 4555554 899998 3333 3999999997 9999999999999955 44456667778999999888776
Q ss_pred HHHHHHHHHHHHHHHHHHhhhccccccccccccccCCCCCCCcCCchhhHHHHHHHHHHHHHHHhccccchhhhhHHHHH
Q 002029 94 FLFGILVLMSFIGSIFFGIATREDLQDGKMKRWYLRPDDTTAYYDPKRAAVAAVLHFLTALMLYGYLIPISLYVSIEIVK 173 (978)
Q Consensus 94 ~~~~~~~~~~~i~~i~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~iP~sL~v~i~~~~ 173 (978)
.+.++.++++++.+. +..|.+. ...+...+++++++||++|+.....+.
T Consensus 225 ~l~~v~li~~~~~~~-~~~~~~~------------------------------~~~~~~lvallV~aiP~aLg~l~~av~ 273 (675)
T TIGR01497 225 ALTLVFLLVTATLWP-FAAYGGN------------------------------AISVTVLVALLVCLIPTTIGGLLSAIG 273 (675)
T ss_pred HHHHHHHHHHHHHHH-HHHhcCh------------------------------hHHHHHHHHHHHHhCchhhhhHHHHHH
Confidence 654433333221111 1111100 013555688899999998766555555
Q ss_pred HHHHHHHhhccccccccCCCcccccCcccccccccceEEEeeCCcccccCeeEEEEEEECCeeeCCCchHHHHHHHhhcC
Q 002029 174 ILQSIFINQDLHMYYEETDKPARARTSNLNEELGQVDTILSDKTGTLTCNSMEFIKCSIAGTSYGRGVTEVERAMARRKG 253 (978)
Q Consensus 174 ~~~~~~i~~d~~m~~~~~~~~~~~r~~~~~e~Lg~v~~I~sDKTGTLT~n~m~~~~~~i~~~~y~~~~~~~~~~~~~~~~ 253 (978)
..++. +| .++|+++|+...+|.||++|+||||||||||+|+|++.+++..+. .
T Consensus 274 iag~~------r~----ar~gvLvK~~~avE~lg~v~~I~~DKTGTLT~g~~~v~~~~~~~~-----~------------ 326 (675)
T TIGR01497 274 IAGMD------RV----LGFNVIATSGRAVEACGDVDTLLLDKTGTITLGNRLASEFIPAQG-----V------------ 326 (675)
T ss_pred HHHHH------HH----HHCCeEeeCcHHHHHhhCCCEEEECCCCcccCCCeEEEEEEecCC-----C------------
Confidence 55555 66 899999999999999999999999999999999999998763210 0
Q ss_pred CCCccchhhhhhcccccCCcccCchhhhcCCCCCCCChHHHHHHHHHHhhhcceeccccCCCCcEEEecCCccHHHHHHH
Q 002029 254 SPLEEEVTEEQEDKASIKGFNFEDERIMNGSWVNEPHADVIQKFLRLLAICHTALPEVDEENGKISYEAESPDEAAFVIA 333 (978)
Q Consensus 254 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~lalC~~~~~~~~~~~~~~~y~~~sp~E~Alv~~ 333 (978)
..++++...++|+.. +.||.+.|++++
T Consensus 327 ---------------------------------------~~~~ll~~aa~~~~~--------------s~hP~a~Aiv~~ 353 (675)
T TIGR01497 327 ---------------------------------------DEKTLADAAQLASLA--------------DDTPEGKSIVIL 353 (675)
T ss_pred ---------------------------------------cHHHHHHHHHHhcCC--------------CCCcHHHHHHHH
Confidence 012456666777543 258999999999
Q ss_pred HHHcCCEEEeecCceeEEEecCCCCCccceeEeeEeEeecCCCCCceEEEEEEeCCCeEEEEEeCCchHHHHHhcccchh
Q 002029 334 ARELGFEFYERTQTSISVHELDPVTGTKVERSYSLLNVLEFSSSRKRMSVIVRSEEGTLLLLSKGADSVMFERLAENGRE 413 (978)
Q Consensus 334 a~~~g~~~~~r~~~~~~i~~~~~~~~~~~~~~~~il~~~~F~s~rkrmsviv~~~~~~~~l~~KGa~~~i~~~~~~~~~~ 413 (978)
|++.|..... ..++.....||++.+|+|++.+. +| ..++|||++.+++.|...+..
T Consensus 354 a~~~~~~~~~--------------------~~~~~~~~~pf~~~~~~sg~~~~--~g--~~~~kGa~e~i~~~~~~~g~~ 409 (675)
T TIGR01497 354 AKQLGIREDD--------------------VQSLHATFVEFTAQTRMSGINLD--NG--RMIRKGAVDAIKRHVEANGGH 409 (675)
T ss_pred HHHcCCCccc--------------------cccccceEEEEcCCCcEEEEEEe--CC--eEEEECCHHHHHHHHHhcCCC
Confidence 9987753211 12344567899999888777553 34 478999999999988755444
Q ss_pred hHHHHHHHHHHHHHccceeEeeEEEeCCHHHHHHHHHHHHHHhhcccccHHHHHHHHHHHhhcccEEEEEEeeccccCCC
Q 002029 414 FEEQTKEHINEYADAGLRTLILAYRELDEKEYKQFNEEFTEAKNSVSADREELAEEIAEKIEKNLILLGATAVEDKLQNG 493 (978)
Q Consensus 414 ~~~~~~~~l~~~a~~Glr~l~~A~r~l~~~e~~~~~~~~~~a~~~l~~~r~~~~~~~~~~ie~dl~llG~i~ieD~lr~~ 493 (978)
..+++.+.+++++++|+|++++|+ |.+++|+++++|++|+|
T Consensus 410 ~~~~~~~~~~~~a~~G~r~l~va~---------------------------------------~~~~lG~i~l~D~~Rp~ 450 (675)
T TIGR01497 410 IPTDLDQAVDQVARQGGTPLVVCE---------------------------------------DNRIYGVIYLKDIVKGG 450 (675)
T ss_pred CcHHHHHHHHHHHhCCCeEEEEEE---------------------------------------CCEEEEEEEecccchhH
Confidence 556778888999999999999993 45799999999999999
Q ss_pred hHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCccccCceEEEEecCCCcccccchhhhHHHHHHHHHHHHHHHHHhhh
Q 002029 494 VPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQGMRQVIISSETPESKTLEKSEDKSAAAAALKASVLHQLIRGK 573 (978)
Q Consensus 494 v~~~I~~L~~aGIkv~mlTGD~~~tA~~ia~~~gl~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 573 (978)
++++|++|+++||+++|+|||+..||..+|+++|+..
T Consensus 451 a~eaI~~l~~~Gi~v~miTGD~~~ta~~iA~~lGI~~------------------------------------------- 487 (675)
T TIGR01497 451 IKERFAQLRKMGIKTIMITGDNRLTAAAIAAEAGVDD------------------------------------------- 487 (675)
T ss_pred HHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCE-------------------------------------------
Confidence 9999999999999999999999999999999999821
Q ss_pred hhhccccCCCCCeEEEEcCchhhhhchhhHHHHHHHHHhccCeeEEEeCCchhHHHHHHHHHccCCCeEEEEcCCcCCHH
Q 002029 574 ELLDSSNESLGPLALIIDGKSLTYALEDDVKDLFLELAIGCASVICCRSSPKQKALVTRLVKTKTSSTTLAIGDGANDVG 653 (978)
Q Consensus 574 ~~~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~f~~l~~~~~~vi~~r~sP~qK~~iV~~lk~~~~~~v~aiGDG~ND~~ 653 (978)
+++|++|++|..+|+.+|+ .|+.|+|+|||.||+|
T Consensus 488 --------------------------------------------v~a~~~PedK~~~v~~lq~-~g~~VamvGDG~NDap 522 (675)
T TIGR01497 488 --------------------------------------------FIAEATPEDKIALIRQEQA-EGKLVAMTGDGTNDAP 522 (675)
T ss_pred --------------------------------------------EEcCCCHHHHHHHHHHHHH-cCCeEEEECCCcchHH
Confidence 7899999999999999998 7889999999999999
Q ss_pred HhhhccccccccCCccchhccccceehhc--hhhhHHHHHHhhhhhhhHhhHhHHHHHHHHHHHHHHHHHHHH
Q 002029 654 MLQEADIGVGISGVEGMQAVMSSDIAIAQ--FRFLERLLLVHGHWCYRRISSMICYFFYKNIAFGFTLFFFEA 724 (978)
Q Consensus 654 ml~~AdvGI~i~g~e~~~a~~asD~vi~~--f~~l~~lll~~gR~~~~~i~~~i~~~~~~n~~~~~~~~~~~~ 724 (978)
||++|||||+|.+. ...|+++||+++.| |..+..+ +.+||..+-....+..|++..+++-.|..+-..|
T Consensus 523 AL~~AdvGiAm~~g-t~~akeaadivLldd~~s~Iv~a-v~~GR~~~~t~~~~~t~~~~~~~~~~~~~~~~~~ 593 (675)
T TIGR01497 523 ALAQADVGVAMNSG-TQAAKEAANMVDLDSDPTKLIEV-VHIGKQLLITRGALTTFSIANDVAKYFAIIPAIF 593 (675)
T ss_pred HHHhCCEeEEeCCC-CHHHHHhCCEEECCCCHHHHHHH-HHHHHHHHHHHHHHheeeecccHHHHHHHHHHHH
Confidence 99999999999532 23389999999998 4448888 8999999999999999998888776555444333
No 23
>KOG0209 consensus P-type ATPase [Inorganic ion transport and metabolism]
Probab=100.00 E-value=3.7e-53 Score=472.70 Aligned_cols=601 Identities=19% Similarity=0.261 Sum_probs=391.9
Q ss_pred cCceeecCceecc------------CCeEEEEEEEeCccch---hccccCCCCCCcCHHHHHHHHHHHHHHHHHHHHHHH
Q 002029 41 PQQLLLRDSKLRN------------TDCIYGAVIFTGRDTK---VFQNSTGPPSKRSKVERRMDKIIYFLFGILVLMSFI 105 (978)
Q Consensus 41 ~~n~l~~Gs~l~~------------tg~~~gvVv~tG~~Tk---i~~~~~~~~~k~s~l~~~~n~~~~~~~~~~~~~~~i 105 (978)
+..++|.||++.. -|-++|.|++||.||. +++..--...+-|- . |+-...+++++++++++
T Consensus 334 k~hVlfGGTkivQht~p~~~slk~pDggc~a~VlrTGFeTSQGkLvRtilf~aervTa--N--n~Etf~FILFLlVFAia 409 (1160)
T KOG0209|consen 334 KLHVLFGGTKIVQHTPPKKASLKTPDGGCVAYVLRTGFETSQGKLVRTILFSAERVTA--N--NRETFIFILFLLVFAIA 409 (1160)
T ss_pred ceEEEEcCceEEEecCCccccccCCCCCeEEEEEeccccccCCceeeeEEecceeeee--c--cHHHHHHHHHHHHHHHH
Confidence 4578999999875 2568999999999993 32221111111111 1 22233344445555554
Q ss_pred HHHHHHhhhccccccccccccccCCCCCCCcCCchhhHHHHHHHHHHHHHHHhccccchhhhhHHHHHHHHHHHHhhccc
Q 002029 106 GSIFFGIATREDLQDGKMKRWYLRPDDTTAYYDPKRAAVAAVLHFLTALMLYGYLIPISLYVSIEIVKILQSIFINQDLH 185 (978)
Q Consensus 106 ~~i~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~iP~sL~v~i~~~~~~~~~~i~~d~~ 185 (978)
++ +++|..... + +.+ +--..|+-...++...||.-||+-++++. .+..+ .
T Consensus 410 Aa--~Yvwv~Gsk-------------d------~~R---srYKL~LeC~LIlTSVvPpELPmELSmAV--NsSL~----A 459 (1160)
T KOG0209|consen 410 AA--GYVWVEGSK-------------D------PTR---SRYKLFLECTLILTSVVPPELPMELSMAV--NSSLI----A 459 (1160)
T ss_pred hh--heEEEeccc-------------C------cch---hhhheeeeeeEEEeccCCCCCchhhhHHH--HHHHH----H
Confidence 43 234442111 1 000 00114566677788999999999776654 44433 3
Q ss_pred cccccCCCcccccCcccccccccceEEEeeCCcccccCeeEEEEEEECCeeeCCCchHHHHHHHhhcCCCCccchhhhhh
Q 002029 186 MYYEETDKPARARTSNLNEELGQVDTILSDKTGTLTCNSMEFIKCSIAGTSYGRGVTEVERAMARRKGSPLEEEVTEEQE 265 (978)
Q Consensus 186 m~~~~~~~~~~~r~~~~~e~Lg~v~~I~sDKTGTLT~n~m~~~~~~i~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 265 (978)
+ ++.++.|..+-.+.-.|+||+-|||||||||+..|.|..+.-... .....
T Consensus 460 L----ak~~vyCTEPFRIPfAGkvdvCCFDKTGTLT~d~lvv~Gvag~~~--~~~~~----------------------- 510 (1160)
T KOG0209|consen 460 L----AKLGVYCTEPFRIPFAGKVDVCCFDKTGTLTEDDLVVEGVAGLSA--DEGAL----------------------- 510 (1160)
T ss_pred H----HHhceeecCccccccCCceeEEEecCCCccccccEEEEecccccC--Ccccc-----------------------
Confidence 4 788999999999999999999999999999999999998642111 00000
Q ss_pred cccccCCcccCchhhhcCCCCCCCChHHHHHHHHHHhhhcceeccccCCCCcEEEecCCccHHHHHHHHHHcCCEEEeec
Q 002029 266 DKASIKGFNFEDERIMNGSWVNEPHADVIQKFLRLLAICHTALPEVDEENGKISYEAESPDEAAFVIAARELGFEFYERT 345 (978)
Q Consensus 266 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~lalC~~~~~~~~~~~~~~~y~~~sp~E~Alv~~a~~~g~~~~~r~ 345 (978)
.+-.+.-.+-++++|.||+...-.++ .-|+|.|+|.+++ .||.+...+
T Consensus 511 ----------------------~~~s~~p~~t~~vlAscHsLv~le~~-------lVGDPlEKA~l~~---v~W~~~k~~ 558 (1160)
T KOG0209|consen 511 ----------------------TPASKAPNETVLVLASCHSLVLLEDK-------LVGDPLEKATLEA---VGWNLEKKN 558 (1160)
T ss_pred ----------------------cchhhCCchHHHHHHHHHHHHHhcCc-------ccCChHHHHHHHh---cCcccccCc
Confidence 00001112456899999998765433 3579999999876 567665422
Q ss_pred CceeEEEecCCCCCccceeEeeEeEeecCCCCCceEEEEEEeCC----CeEEEEEeCCchHHHHHhcccchhhHHHHHHH
Q 002029 346 QTSISVHELDPVTGTKVERSYSLLNVLEFSSSRKRMSVIVRSEE----GTLLLLSKGADSVMFERLAENGREFEEQTKEH 421 (978)
Q Consensus 346 ~~~~~i~~~~~~~~~~~~~~~~il~~~~F~s~rkrmsviv~~~~----~~~~l~~KGa~~~i~~~~~~~~~~~~~~~~~~ 421 (978)
. +..+. | .-...+|.+.+.|.|.-|||||+++..+ .+++..+|||||+|-+++.. .+..+.+.
T Consensus 559 ~--v~p~~-----~--~~~~lkI~~ryhFsSaLKRmsvva~~~~~g~s~k~~~aVKGAPEvi~~ml~d----vP~dY~~i 625 (1160)
T KOG0209|consen 559 S--VCPRE-----G--NGKKLKIIQRYHFSSALKRMSVVASHQGPGSSEKYFVAVKGAPEVIQEMLRD----VPKDYDEI 625 (1160)
T ss_pred c--cCCCc-----C--CCcccchhhhhhHHHHHHHHHhhhhcccCCCceEEEEEecCCHHHHHHHHHh----CchhHHHH
Confidence 1 11110 0 1135778899999999999999998753 36899999999999998875 45567778
Q ss_pred HHHHHHccceeEeeEEEeCCHHHHHHHHHHHHHHhhcccccHHHHHHHHHHHhhcccEEEEEEeeccccCCChHHHHHHH
Q 002029 422 INEYADAGLRTLILAYRELDEKEYKQFNEEFTEAKNSVSADREELAEEIAEKIEKNLILLGATAVEDKLQNGVPECIDKL 501 (978)
Q Consensus 422 l~~~a~~Glr~l~~A~r~l~~~e~~~~~~~~~~a~~~l~~~r~~~~~~~~~~ie~dl~llG~i~ieD~lr~~v~~~I~~L 501 (978)
..+|+.+|.|||++|||.+.+--. .+.-+..++.+|+||+|.|.+.+.-|+|++++++|+.|
T Consensus 626 Yk~ytR~GsRVLALg~K~l~~~~~------------------~q~rd~~Re~vEsdLtFaGFlif~CPlK~Ds~~~I~el 687 (1160)
T KOG0209|consen 626 YKRYTRQGSRVLALGYKPLGDMMV------------------SQVRDLKREDVESDLTFAGFLIFSCPLKPDSKKTIKEL 687 (1160)
T ss_pred HHHHhhccceEEEEecccccccch------------------hhhhhhhhhhhhhcceeeeeEEEeCCCCccHHHHHHHH
Confidence 889999999999999999974211 11112335788999999999999999999999999999
Q ss_pred HHcCCeEEEEcCCChhhHHHHHHHcCccccCceEEEEecCCCccc-cc-chhhhHHHHHHHHHHHHHHHHHhhhhhhccc
Q 002029 502 AQAGIKLWVLTGDKMETAINIGFACSLLRQGMRQVIISSETPESK-TL-EKSEDKSAAAAALKASVLHQLIRGKELLDSS 579 (978)
Q Consensus 502 ~~aGIkv~mlTGD~~~tA~~ia~~~gl~~~~~~~i~i~~~~~~~~-~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 579 (978)
++++.+++|+|||++.||.++|+++|++.....++.+..+..... .+ +.++... ..++..
T Consensus 688 ~~SSH~vvMITGDnpLTAchVak~v~iv~k~~~vl~~~~~~~~~~~~w~s~d~t~~------------------lp~~p~ 749 (1160)
T KOG0209|consen 688 NNSSHRVVMITGDNPLTACHVAKEVGIVEKPTLVLDLPEEGDGNQLEWVSVDGTIV------------------LPLKPG 749 (1160)
T ss_pred hccCceEEEEeCCCccchheehheeeeeccCceeeccCccCCCceeeEecCCCcee------------------ecCCCC
Confidence 999999999999999999999999999887655554444321110 00 0000000 000000
Q ss_pred cC---CCCCeEEEEcCchhhhhchhh-HHHHHHHHHhccCeeEEEeCCchhHHHHHHHHHccCCCeEEEEcCCcCCHHHh
Q 002029 580 NE---SLGPLALIIDGKSLTYALEDD-VKDLFLELAIGCASVICCRSSPKQKALVTRLVKTKTSSTTLAIGDGANDVGML 655 (978)
Q Consensus 580 ~~---~~~~~~lvi~G~~l~~~~~~~-~~~~f~~l~~~~~~vi~~r~sP~qK~~iV~~lk~~~~~~v~aiGDG~ND~~ml 655 (978)
+. -...+.+.++|..++++...+ +...+.+ +-||+|++|+||..++..+|+ .|+.++|+|||.||+.||
T Consensus 750 ~~~~~l~~~~dlcitG~~l~~l~~~~~l~~l~~h------v~VfARvaP~QKE~ii~tlK~-~Gy~TLMCGDGTNDVGAL 822 (1160)
T KOG0209|consen 750 KKKTLLAETHDLCITGSALDHLQATDQLRRLIPH------VWVFARVAPKQKEFIITTLKK-LGYVTLMCGDGTNDVGAL 822 (1160)
T ss_pred ccchhhhhhhhhhcchhHHHHHhhhHHHHHhhhh------eeEEEeeChhhHHHHHHHHHh-cCeEEEEecCCCcchhhh
Confidence 00 112456789999999888765 3333333 339999999999999999998 999999999999999999
Q ss_pred hhcccccccc-CCcc-----c-----------------------------------------------------------
Q 002029 656 QEADIGVGIS-GVEG-----M----------------------------------------------------------- 670 (978)
Q Consensus 656 ~~AdvGI~i~-g~e~-----~----------------------------------------------------------- 670 (978)
++|||||++- +.+. .
T Consensus 823 K~AhVGVALL~~~~e~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~e~l~~i~kdlee~~~~p 902 (1160)
T KOG0209|consen 823 KQAHVGVALLNNPEESKKDKEKRRKKKLKLEPAKQTIAANRQNSPRPPVPPAERHNPHAEKTRERLKKILKDLEEDKGDP 902 (1160)
T ss_pred hhcccceehhcCChhhhhHHhhhhhhccccCchhhHHHhhhccCCCCCCCCccccChhHHHHHHHHHHHHHHHhhcccCc
Confidence 9999999863 3110 0
Q ss_pred -----hhccccceehhc--hhhhHHHHHHhhhhhhhHhhHhHHHHHHHHHHHHHHHHHHHHhhccccccchhhHHHHHHH
Q 002029 671 -----QAVMSSDIAIAQ--FRFLERLLLVHGHWCYRRISSMICYFFYKNIAFGFTLFFFEAYASFSGQPVYNDWFLSLYN 743 (978)
Q Consensus 671 -----~a~~asD~vi~~--f~~l~~lll~~gR~~~~~i~~~i~~~~~~n~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~n 743 (978)
+|..||.|.-.- -..+.+. +..||+..... ...+|-+++-.+...|+..-.+----=|.+.|.+.--
T Consensus 903 ~vKLGDASiAAPFTsK~asv~~v~~I-IrQGRctLVtT-----lQMfKILALN~LisAYslSvlyldGVKfgD~QaTisG 976 (1160)
T KOG0209|consen 903 LVKLGDASIAAPFTSKLASVSSVTHI-IRQGRCTLVTT-----LQMFKILALNCLISAYSLSVLYLDGVKFGDTQATISG 976 (1160)
T ss_pred cccccccccccccccccchHHHHHHH-HHhcchhHHHH-----HHHHHHHHHHHHHHHHHHHHhhhcCceecchhHhHHH
Confidence 012223332211 2334555 89999988664 3344544544444444433221111226777777766
Q ss_pred HHHhhhhHhhhhccccCCChHHhhhCccchhcccccccccHHHHHHHHHHHHHHHHHHHHHHHHh
Q 002029 744 VFFTSLPVIALGVFDQDVSARFCLKFPLLYQEGVQNILFSWTRILGWALNGVANAAIIFFFCIHA 808 (978)
Q Consensus 744 ~i~~~~p~~~l~~~~~~~~~~~~~~~P~ly~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~ 808 (978)
+++ .+.++.+....+-+....++|. ..+||...+...+.+-.+|-...+++.--.
T Consensus 977 lLl---a~cFlfISrskPLetLSkeRP~-------~nIFN~Y~i~svl~QFaVH~~tLvYi~~~a 1031 (1160)
T KOG0209|consen 977 LLL---AACFLFISRSKPLETLSKERPL-------PNIFNVYIILSVLLQFAVHIATLVYITGEA 1031 (1160)
T ss_pred HHH---HHHHhheecCCchhhHhhcCCC-------CCcchHHHHHHHHHHHHHHHHHhhhhHHHH
Confidence 553 3334434443344444444554 578999988888877777766655554443
No 24
>TIGR01494 ATPase_P-type ATPase, P-type (transporting), HAD superfamily, subfamily IC. The crystal structure of one calcium-pumping ATPase and an analysis of the fold of the catalytic domain of the P-type ATPases have been published. These reveal that the catalytic core of these enzymes is a haloacid dehalogenase(HAD)-type aspartate-nucleophile hydrolase. The location of the ATP-binding loop in between the first and second HAD conserved catalytic motifs defines these enzymes as members of subfamily I of the HAD superfamily (see also TIGR01493, TIGR01509, TIGR01549, TIGR01544 and TIGR01545). Based on these classifications, the P-type ATPase _superfamily_ corresponds to the IC subfamily of the HAD superfamily.
Probab=100.00 E-value=4.9e-52 Score=489.48 Aligned_cols=392 Identities=31% Similarity=0.442 Sum_probs=325.4
Q ss_pred CCccccC--CcCceeecCceeccCCeEEEEEEEeCccchh---ccccCCCCCCcCHHHHHHHHHH-HHHHHHHHHHHHHH
Q 002029 33 EEQQYPL--TPQQLLLRDSKLRNTDCIYGAVIFTGRDTKV---FQNSTGPPSKRSKVERRMDKII-YFLFGILVLMSFIG 106 (978)
Q Consensus 33 ~~~~~pl--~~~n~l~~Gs~l~~tg~~~gvVv~tG~~Tki---~~~~~~~~~k~s~l~~~~n~~~-~~~~~~~~~~~~i~ 106 (978)
+||+.|+ .+++.+++|+.+.+ |.+...|+.+|.+|.. ..........++++++..+++. .+++++.++++++.
T Consensus 85 TGEs~pv~k~~g~~v~~gs~~~~-G~~~~~v~~~~~~s~~~~i~~~v~~~~~~k~~~~~~~~~~~~~~~~~~~~~la~~~ 163 (499)
T TIGR01494 85 TGESVPVLKTAGDAVFAGTYVFN-GTLIVVVSATGPNTFGGKIAVVVYTGFETKTPLQPKLDRLSDIIFILFVLLIALAV 163 (499)
T ss_pred cCCCCCeeeccCCccccCcEEec-cEEEEEEEEeccccHHHHHHHHHHhcCCCCCchHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4899988 55799999999998 9999999999999954 3333334454688999999998 67777666666666
Q ss_pred HHHHHhhhccccccccccccccCCCCCCCcCCchhhHHHHHHHHHHHHHHHhccccchhhhhHHHHHHHHHHHHhhcccc
Q 002029 107 SIFFGIATREDLQDGKMKRWYLRPDDTTAYYDPKRAAVAAVLHFLTALMLYGYLIPISLYVSIEIVKILQSIFINQDLHM 186 (978)
Q Consensus 107 ~i~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~iP~sL~v~i~~~~~~~~~~i~~d~~m 186 (978)
++++..+.... . .+...+.+++++++.+|||+|+++++++...+.. +|
T Consensus 164 ~~~~~~~~~~~------~--------------------~~~~~~~~~~~vl~~~~P~aL~~~~~~~~~~~~~------~~ 211 (499)
T TIGR01494 164 FLFWAIGLWDP------N--------------------SIFKIFLRALILLVIAIPIALPLAVTIALAVGDA------RL 211 (499)
T ss_pred HHHHHHHHccc------c--------------------cHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHH------HH
Confidence 55443221100 0 1134788999999999999999999999998876 66
Q ss_pred ccccCCCcccccCcccccccccceEEEeeCCcccccCeeEEEEEEECCeeeCCCchHHHHHHHhhcCCCCccchhhhhhc
Q 002029 187 YYEETDKPARARTSNLNEELGQVDTILSDKTGTLTCNSMEFIKCSIAGTSYGRGVTEVERAMARRKGSPLEEEVTEEQED 266 (978)
Q Consensus 187 ~~~~~~~~~~~r~~~~~e~Lg~v~~I~sDKTGTLT~n~m~~~~~~i~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 266 (978)
.++++++|+++.+|+||+++++|||||||||+|+|+|+++++.+.
T Consensus 212 ----~~~gilvk~~~~lE~l~~v~~i~fDKTGTLT~~~~~v~~~~~~~~------------------------------- 256 (499)
T TIGR01494 212 ----AKKGIVVRSLNALEELGKVDYICSDKTGTLTKNEMSFKKVSVLGG------------------------------- 256 (499)
T ss_pred ----HHCCcEEechhhhhhccCCcEEEeeCCCccccCceEEEEEEecCC-------------------------------
Confidence 778999999999999999999999999999999999999864321
Q ss_pred ccccCCcccCchhhhcCCCCCCCChHHHHHHHHHHhhhcceeccccCCCCcEEEecCCccHHHHHHHHHHcCCEEEeecC
Q 002029 267 KASIKGFNFEDERIMNGSWVNEPHADVIQKFLRLLAICHTALPEVDEENGKISYEAESPDEAAFVIAARELGFEFYERTQ 346 (978)
Q Consensus 267 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~lalC~~~~~~~~~~~~~~~y~~~sp~E~Alv~~a~~~g~~~~~r~~ 346 (978)
++.++||+|.|++++++..+
T Consensus 257 ----------------------------------------------------~~~s~hp~~~ai~~~~~~~~-------- 276 (499)
T TIGR01494 257 ----------------------------------------------------EYLSGHPDERALVKSAKWKI-------- 276 (499)
T ss_pred ----------------------------------------------------CcCCCChHHHHHHHHhhhcC--------
Confidence 01246999999999886421
Q ss_pred ceeEEEecCCCCCccceeEeeEeEeecCCCCCceEEEEEEeCCCeEEEEEeCCchHHHHHhcccchhhHHHHHHHHHHHH
Q 002029 347 TSISVHELDPVTGTKVERSYSLLNVLEFSSSRKRMSVIVRSEEGTLLLLSKGADSVMFERLAENGREFEEQTKEHINEYA 426 (978)
Q Consensus 347 ~~~~i~~~~~~~~~~~~~~~~il~~~~F~s~rkrmsviv~~~~~~~~l~~KGa~~~i~~~~~~~~~~~~~~~~~~l~~~a 426 (978)
+...||++.+|+|+++++.+++ .|+||+++.+.++|.. ..+.++.++
T Consensus 277 ----------------------~~~~~f~~~~~~~~~~~~~~~~---~~~~G~~~~i~~~~~~--------~~~~~~~~~ 323 (499)
T TIGR01494 277 ----------------------LNVFEFSSVRKRMSVIVRGPDG---TYVKGAPEFVLSRVKD--------LEEKVKELA 323 (499)
T ss_pred ----------------------cceeccCCCCceEEEEEecCCc---EEEeCCHHHHHHhhHH--------HHHHHHHHH
Confidence 1356999999999999987444 4789999999988742 233455688
Q ss_pred HccceeEeeEEEeCCHHHHHHHHHHHHHHhhcccccHHHHHHHHHHHhhcccEEEEEEeeccccCCChHHHHHHHHHcCC
Q 002029 427 DAGLRTLILAYRELDEKEYKQFNEEFTEAKNSVSADREELAEEIAEKIEKNLILLGATAVEDKLQNGVPECIDKLAQAGI 506 (978)
Q Consensus 427 ~~Glr~l~~A~r~l~~~e~~~~~~~~~~a~~~l~~~r~~~~~~~~~~ie~dl~llG~i~ieD~lr~~v~~~I~~L~~aGI 506 (978)
.+|+|++++|++. +++|+++++|++|++++++|+.|+++|+
T Consensus 324 ~~g~~~~~~a~~~---------------------------------------~~~g~i~l~d~lr~~~~~~i~~l~~~gi 364 (499)
T TIGR01494 324 QSGLRVLAVASKE---------------------------------------TLLGLLGLEDPLRDDAKETISELREAGI 364 (499)
T ss_pred hCCCEEEEEEECC---------------------------------------eEEEEEEecCCCchhHHHHHHHHHHCCC
Confidence 9999999999532 5999999999999999999999999999
Q ss_pred eEEEEcCCChhhHHHHHHHcCccccCceEEEEecCCCcccccchhhhHHHHHHHHHHHHHHHHHhhhhhhccccCCCCCe
Q 002029 507 KLWVLTGDKMETAINIGFACSLLRQGMRQVIISSETPESKTLEKSEDKSAAAAALKASVLHQLIRGKELLDSSNESLGPL 586 (978)
Q Consensus 507 kv~mlTGD~~~tA~~ia~~~gl~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 586 (978)
++||+|||+..+|..+|+++|+
T Consensus 365 ~~~~ltGD~~~~a~~ia~~lgi---------------------------------------------------------- 386 (499)
T TIGR01494 365 RVIMLTGDNVLTAKAIAKELGI---------------------------------------------------------- 386 (499)
T ss_pred eEEEEcCCCHHHHHHHHHHcCc----------------------------------------------------------
Confidence 9999999999999999999873
Q ss_pred EEEEcCchhhhhchhhHHHHHHHHHhccCeeEEEeCCchhHHHHHHHHHccCCCeEEEEcCCcCCHHHhhhccccccccC
Q 002029 587 ALIIDGKSLTYALEDDVKDLFLELAIGCASVICCRSSPKQKALVTRLVKTKTSSTTLAIGDGANDVGMLQEADIGVGISG 666 (978)
Q Consensus 587 ~lvi~G~~l~~~~~~~~~~~f~~l~~~~~~vi~~r~sP~qK~~iV~~lk~~~~~~v~aiGDG~ND~~ml~~AdvGI~i~g 666 (978)
++|++|++|.++|+.+|+ .|+.|+|+|||.||++|+++|||||++.
T Consensus 387 --------------------------------~~~~~p~~K~~~v~~l~~-~g~~v~~vGDg~nD~~al~~Advgia~~- 432 (499)
T TIGR01494 387 --------------------------------FARVTPEEKAALVEALQK-KGRVVAMTGDGVNDAPALKKADVGIAMG- 432 (499)
T ss_pred --------------------------------eeccCHHHHHHHHHHHHH-CCCEEEEECCChhhHHHHHhCCCccccc-
Confidence 477899999999999998 7899999999999999999999999994
Q ss_pred Cccchhccccceehhchhh--hHHHHHHhhhhhhhHhhHhHHHHHHHHHHHHHHHHHH
Q 002029 667 VEGMQAVMSSDIAIAQFRF--LERLLLVHGHWCYRRISSMICYFFYKNIAFGFTLFFF 722 (978)
Q Consensus 667 ~e~~~a~~asD~vi~~f~~--l~~lll~~gR~~~~~i~~~i~~~~~~n~~~~~~~~~~ 722 (978)
|+.+||+++.+++. +..+ +.+||..++++++++.|.+++|+..+.+.+++
T Consensus 433 -----a~~~adivl~~~~l~~i~~~-~~~~r~~~~~i~~~~~~~~~~n~~~~~~a~~~ 484 (499)
T TIGR01494 433 -----AKAAADIVLLDDNLSTIVDA-LKEGRKTFSTIKSNIFWAIAYNLILIPLAALL 484 (499)
T ss_pred -----hHHhCCeEEecCCHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 67889999998544 5555 89999999999999999999999977666653
No 25
>KOG0205 consensus Plasma membrane H+-transporting ATPase [Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.1e-53 Score=466.34 Aligned_cols=462 Identities=20% Similarity=0.257 Sum_probs=353.2
Q ss_pred CccccC--CcCceeecCceeccCCeEEEEEEEeCccchhcccc--CCCCCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 002029 34 EQQYPL--TPQQLLLRDSKLRNTDCIYGAVIFTGRDTKVFQNS--TGPPSKRSKVERRMDKIIYFLFGILVLMSFIGSIF 109 (978)
Q Consensus 34 ~~~~pl--~~~n~l~~Gs~l~~tg~~~gvVv~tG~~Tki~~~~--~~~~~k~s~l~~~~n~~~~~~~~~~~~~~~i~~i~ 109 (978)
||+.|+ .+++-+|+||+++. |.+.+||++||.+|-.++.. .++.....++++-++.+..++++.+.+--++..++
T Consensus 187 GESLpvtKh~gd~vfSgSTcKq-GE~eaVViATg~~TF~GkAA~LVdst~~~GHFqkVLt~IGn~ci~si~~g~lie~~v 265 (942)
T KOG0205|consen 187 GESLPVTKHPGDEVFSGSTCKQ-GEIEAVVIATGVHTFFGKAAHLVDSTNQVGHFQKVLTGIGNFCICSIALGMLIEITV 265 (942)
T ss_pred CCccccccCCCCceeccccccc-ceEEEEEEEeccceeehhhHHhhcCCCCcccHHHHHHhhhhHHHHHHHHHHHHHHHh
Confidence 899998 77899999999998 99999999999999664432 23356678999999999988866443333322222
Q ss_pred HHhhhccccccccccccccCCCCCCCcCCchhhHHHHHHHHHHHHHHHhccccchhhhhHHHHHHHHHHHHhhccccccc
Q 002029 110 FGIATREDLQDGKMKRWYLRPDDTTAYYDPKRAAVAAVLHFLTALMLYGYLIPISLYVSIEIVKILQSIFINQDLHMYYE 189 (978)
Q Consensus 110 ~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~iP~sL~v~i~~~~~~~~~~i~~d~~m~~~ 189 (978)
.+..+...+.. ..-+.+++++.-||++||..+++..++++. +|
T Consensus 266 my~~q~R~~r~----------------------------~i~nLlvllIGgiPiamPtVlsvTMAiGs~------rL--- 308 (942)
T KOG0205|consen 266 MYPIQHRLYRD----------------------------GIDNLLVLLIGGIPIAMPTVLSVTMAIGSH------RL--- 308 (942)
T ss_pred hhhhhhhhhhh----------------------------hhhheheeeecccccccceeeeehhhHHHH------HH---
Confidence 22222222110 233445566667999999999999999998 55
Q ss_pred cCCCcccccCcccccccccceEEEeeCCcccccCeeEEEE----EEECCeeeCCCchHHHHHHHhhcCCCCccchhhhhh
Q 002029 190 ETDKPARARTSNLNEELGQVDTILSDKTGTLTCNSMEFIK----CSIAGTSYGRGVTEVERAMARRKGSPLEEEVTEEQE 265 (978)
Q Consensus 190 ~~~~~~~~r~~~~~e~Lg~v~~I~sDKTGTLT~n~m~~~~----~~i~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 265 (978)
++++++++.+.++|+|+.+|++|||||||||.|++++.+ ++..|..
T Consensus 309 -aqqgAItkrmtAIEemAGmdVLCSDKTGTLTlNkLSvdknl~ev~v~gv~----------------------------- 358 (942)
T KOG0205|consen 309 -SQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDKNLIEVFVKGVD----------------------------- 358 (942)
T ss_pred -HhcccHHHHHHHHHHhhCceEEeecCcCceeecceecCcCcceeeecCCC-----------------------------
Confidence 889999999999999999999999999999999999876 2222221
Q ss_pred cccccCCcccCchhhhcCCCCCCCChHHHHHHHHHHhhhcceeccccCCCCcEEEecCCccHHHHHHHHHHcCCEEEeec
Q 002029 266 DKASIKGFNFEDERIMNGSWVNEPHADVIQKFLRLLAICHTALPEVDEENGKISYEAESPDEAAFVIAARELGFEFYERT 345 (978)
Q Consensus 266 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~lalC~~~~~~~~~~~~~~~y~~~sp~E~Alv~~a~~~g~~~~~r~ 345 (978)
+ .++++..|..+ .. ++.+..|.|+|...++=
T Consensus 359 -------------------------~---D~~~L~A~rAs--r~-----------en~DAID~A~v~~L~dP-------- 389 (942)
T KOG0205|consen 359 -------------------------K---DDVLLTAARAS--RK-----------ENQDAIDAAIVGMLADP-------- 389 (942)
T ss_pred -------------------------h---HHHHHHHHHHh--hh-----------cChhhHHHHHHHhhcCH--------
Confidence 0 12222223222 11 13578999999875431
Q ss_pred CceeEEEecCCCCCccceeEeeEeEeecCCCCCceEEEEEEeCCCeEEEEEeCCchHHHHHhcccchhhHHHHHHHHHHH
Q 002029 346 QTSISVHELDPVTGTKVERSYSLLNVLEFSSSRKRMSVIVRSEEGTLLLLSKGADSVMFERLAENGREFEEQTKEHINEY 425 (978)
Q Consensus 346 ~~~~~i~~~~~~~~~~~~~~~~il~~~~F~s~rkrmsviv~~~~~~~~l~~KGa~~~i~~~~~~~~~~~~~~~~~~l~~~ 425 (978)
+..+..|+.++.+|||+..||....+.+++|..+-.+||||+.|++.|+... +.++...+.+++|
T Consensus 390 --------------Keara~ikevhF~PFnPV~Krta~ty~d~dG~~~r~sKGAPeqil~l~~~~~-~i~~~vh~~id~~ 454 (942)
T KOG0205|consen 390 --------------KEARAGIKEVHFLPFNPVDKRTALTYIDPDGNWHRVSKGAPEQILKLCNEDH-DIPERVHSIIDKF 454 (942)
T ss_pred --------------HHHhhCceEEeeccCCccccceEEEEECCCCCEEEecCCChHHHHHHhhccC-cchHHHHHHHHHH
Confidence 0124779999999999999999999999999999999999999999998754 6888999999999
Q ss_pred HHccceeEeeEEEeCCHHHHHHHHHHHHHHhhcccccHHHHHHHHHHHhhcccEEEEEEeeccccCCChHHHHHHHHHcC
Q 002029 426 ADAGLRTLILAYRELDEKEYKQFNEEFTEAKNSVSADREELAEEIAEKIEKNLILLGATAVEDKLQNGVPECIDKLAQAG 505 (978)
Q Consensus 426 a~~Glr~l~~A~r~l~~~e~~~~~~~~~~a~~~l~~~r~~~~~~~~~~ie~dl~llG~i~ieD~lr~~v~~~I~~L~~aG 505 (978)
|++|+|.|++|++..++..- +.-..-.+++|+.-+-||+|.+..++|.....-|
T Consensus 455 AeRGlRSLgVArq~v~e~~~--------------------------~~~g~pw~~~gllp~fdpprhdsa~tirral~lG 508 (942)
T KOG0205|consen 455 AERGLRSLAVARQEVPEKTK--------------------------ESPGGPWEFVGLLPLFDPPRHDSAETIRRALNLG 508 (942)
T ss_pred HHhcchhhhhhhhccccccc--------------------------cCCCCCcccccccccCCCCccchHHHHHHHHhcc
Confidence 99999999999998876421 1113567899999999999999999999999999
Q ss_pred CeEEEEcCCChhhHHHHHHHcCccccCce---EEEEecCCCcccccchhhhHHHHHHHHHHHHHHHHHhhhhhhccccCC
Q 002029 506 IKLWVLTGDKMETAINIGFACSLLRQGMR---QVIISSETPESKTLEKSEDKSAAAAALKASVLHQLIRGKELLDSSNES 582 (978)
Q Consensus 506 Ikv~mlTGD~~~tA~~ia~~~gl~~~~~~---~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 582 (978)
..|.|+|||...-+...++.+|+-.+-.. ....+.++
T Consensus 509 v~VkmitgdqlaI~keTgrrlgmgtnmypss~llG~~~~~---------------------------------------- 548 (942)
T KOG0205|consen 509 VNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGLGKDG---------------------------------------- 548 (942)
T ss_pred ceeeeecchHHHHHHhhhhhhccccCcCCchhhccCCCCC----------------------------------------
Confidence 99999999999999999999998543211 00000000
Q ss_pred CCCeEEEEcCchhhhhchhhHHHHHHHHHhccCeeEEEeCCchhHHHHHHHHHccCCCeEEEEcCCcCCHHHhhhccccc
Q 002029 583 LGPLALIIDGKSLTYALEDDVKDLFLELAIGCASVICCRSSPKQKALVTRLVKTKTSSTTLAIGDGANDVGMLQEADIGV 662 (978)
Q Consensus 583 ~~~~~lvi~G~~l~~~~~~~~~~~f~~l~~~~~~vi~~r~sP~qK~~iV~~lk~~~~~~v~aiGDG~ND~~ml~~AdvGI 662 (978)
-+.|.......+ ++.-|+.+.|+||..+|+.+|+ +++.|+|+|||+||+|+++.||+||
T Consensus 549 ------~~~~~~v~elie--------------~adgfAgVfpehKy~iV~~Lq~-r~hi~gmtgdgvndapaLKkAdigi 607 (942)
T KOG0205|consen 549 ------SMPGSPVDELIE--------------KADGFAGVFPEHKYEIVKILQE-RKHIVGMTGDGVNDAPALKKADIGI 607 (942)
T ss_pred ------CCCCCcHHHHhh--------------hccCccccCHHHHHHHHHHHhh-cCceecccCCCcccchhhcccccce
Confidence 011111111111 3347899999999999999999 8999999999999999999999999
Q ss_pred cccCCccchhccccceehhchh--hhHHHHHHhhhhhhhHhhHhHHHHHHHHHHHH
Q 002029 663 GISGVEGMQAVMSSDIAIAQFR--FLERLLLVHGHWCYRRISSMICYFFYKNIAFG 716 (978)
Q Consensus 663 ~i~g~e~~~a~~asD~vi~~f~--~l~~lll~~gR~~~~~i~~~i~~~~~~n~~~~ 716 (978)
++.+.... |..+||+|+..-. -+... +..+|.+|+|++.+..|.+.-.+-.+
T Consensus 608 ava~atda-ar~asdiVltepglSviI~a-vltSraIfqrmknytiyavsitiriv 661 (942)
T KOG0205|consen 608 AVADATDA-ARSASDIVLTEPGLSVIISA-VLTSRAIFQRMKNYTIYAVSITIRIV 661 (942)
T ss_pred eeccchhh-hcccccEEEcCCCchhhHHH-HHHHHHHHHHHhhheeeeehhHHHHH
Confidence 99766554 7889999999844 35556 78999999999999888877665544
No 26
>COG2217 ZntA Cation transport ATPase [Inorganic ion transport and metabolism]
Probab=100.00 E-value=2.2e-50 Score=474.60 Aligned_cols=432 Identities=21% Similarity=0.259 Sum_probs=338.1
Q ss_pred EEEecCCCCCcce----eEEEEEEC-----CccccC--CcCceeecCceeccCCeEEEEEEEeCccchh---ccccCCCC
Q 002029 13 IIRCEDPNANLYT----FVGSLELE-----EQQYPL--TPQQLLLRDSKLRNTDCIYGAVIFTGRDTKV---FQNSTGPP 78 (978)
Q Consensus 13 ~i~~e~p~~~l~~----f~G~~~~~-----~~~~pl--~~~n~l~~Gs~l~~tg~~~gvVv~tG~~Tki---~~~~~~~~ 78 (978)
.+---+|.+.+-- -+|...+| ||+.|+ .+++.+++||.+.+ |.....|+.+|.||.+ ....++++
T Consensus 234 D~v~VrpGE~IPvDG~V~~G~s~vDeS~iTGEs~PV~k~~Gd~V~aGtiN~~-G~l~i~vt~~~~dt~la~Ii~LVe~Aq 312 (713)
T COG2217 234 DIVLVRPGERIPVDGVVVSGSSSVDESMLTGESLPVEKKPGDEVFAGTVNLD-GSLTIRVTRVGADTTLARIIRLVEEAQ 312 (713)
T ss_pred CEEEECCCCEecCCeEEEeCcEEeecchhhCCCCCEecCCCCEEeeeEEECC-ccEEEEEEecCccCHHHHHHHHHHHHh
Confidence 3444455555432 13344443 899997 88999999999997 9999999999999955 55567888
Q ss_pred CCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccccccccccccCCCCCCCcCCchhhHHHHHHHHHHHHHHHh
Q 002029 79 SKRSKVERRMDKIIYFLFGILVLMSFIGSIFFGIATREDLQDGKMKRWYLRPDDTTAYYDPKRAAVAAVLHFLTALMLYG 158 (978)
Q Consensus 79 ~k~s~l~~~~n~~~~~~~~~~~~~~~i~~i~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~ 158 (978)
.+++|+|+..|++..++.++.++++++.+++|.++... .| -..+.+++++++
T Consensus 313 ~~Ka~iqrlaDr~a~~fvp~vl~ia~l~f~~w~~~~~~--------~~--------------------~~a~~~a~avLV 364 (713)
T COG2217 313 SSKAPIQRLADRVASYFVPVVLVIAALTFALWPLFGGG--------DW--------------------ETALYRALAVLV 364 (713)
T ss_pred hCCchHHHHHHHHHHccHHHHHHHHHHHHHHHHHhcCC--------cH--------------------HHHHHHHHhhee
Confidence 99999999999999999998888888887755443321 12 226889999999
Q ss_pred ccccchhhhhHHHHHHHHHHHHhhccccccccCCCcccccCcccccccccceEEEeeCCcccccCeeEEEEEEECCeeeC
Q 002029 159 YLIPISLYVSIEIVKILQSIFINQDLHMYYEETDKPARARTSNLNEELGQVDTILSDKTGTLTCNSMEFIKCSIAGTSYG 238 (978)
Q Consensus 159 ~~iP~sL~v~i~~~~~~~~~~i~~d~~m~~~~~~~~~~~r~~~~~e~Lg~v~~I~sDKTGTLT~n~m~~~~~~i~~~~y~ 238 (978)
..|||+|.++.+++.+.+.... .++|+++|+.+.+|.|+++|+|+||||||||+|++++..+...+. +
T Consensus 365 IaCPCALgLAtP~ai~~g~g~a----------A~~GILiK~g~~LE~l~~v~tvvFDKTGTLT~G~p~v~~v~~~~~--~ 432 (713)
T COG2217 365 IACPCALGLATPTAILVGIGRA----------ARRGILIKGGEALERLAKVDTVVFDKTGTLTEGKPEVTDVVALDG--D 432 (713)
T ss_pred eeCccHHHhHHHHHHHHHHHHH----------HhCceEEeChHHHHhhccCCEEEEeCCCCCcCCceEEEEEecCCC--C
Confidence 9999999999999998887743 789999999999999999999999999999999999999864322 0
Q ss_pred CCchHHHHHHHhhcCCCCccchhhhhhcccccCCcccCchhhhcCCCCCCCChHHHHHHHHHHhhhcceeccccCCCCcE
Q 002029 239 RGVTEVERAMARRKGSPLEEEVTEEQEDKASIKGFNFEDERIMNGSWVNEPHADVIQKFLRLLAICHTALPEVDEENGKI 318 (978)
Q Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~lalC~~~~~~~~~~~~~~ 318 (978)
. .+++...+ + .
T Consensus 433 --e-----------------------------------------------------~~~L~laA-a-------------l 443 (713)
T COG2217 433 --E-----------------------------------------------------DELLALAA-A-------------L 443 (713)
T ss_pred --H-----------------------------------------------------HHHHHHHH-H-------------H
Confidence 0 12222222 1 1
Q ss_pred EEecCCccHHHHHHHHHHcCCEEEeecCceeEEEecCCCCCccceeEeeEeEeecCCCCCceEEEEEEeCCCeEEEEEeC
Q 002029 319 SYEAESPDEAAFVIAARELGFEFYERTQTSISVHELDPVTGTKVERSYSLLNVLEFSSSRKRMSVIVRSEEGTLLLLSKG 398 (978)
Q Consensus 319 ~y~~~sp~E~Alv~~a~~~g~~~~~r~~~~~~i~~~~~~~~~~~~~~~~il~~~~F~s~rkrmsviv~~~~~~~~l~~KG 398 (978)
+..++||..+|++++|++.|...... + ...+|. +|--+. +|+. +.-|
T Consensus 444 E~~S~HPiA~AIv~~a~~~~~~~~~~------~---~~i~G~---------------------Gv~~~v-~g~~--v~vG 490 (713)
T COG2217 444 EQHSEHPLAKAIVKAAAERGLPDVED------F---EEIPGR---------------------GVEAEV-DGER--VLVG 490 (713)
T ss_pred HhcCCChHHHHHHHHHHhcCCCCccc------e---eeeccC---------------------cEEEEE-CCEE--EEEc
Confidence 22467999999999999877211110 0 001111 111111 3432 2338
Q ss_pred CchHHHHHhcccchhhHHHHHHHHHHHHHccceeEeeEEEeCCHHHHHHHHHHHHHHhhcccccHHHHHHHHHHHhhccc
Q 002029 399 ADSVMFERLAENGREFEEQTKEHINEYADAGLRTLILAYRELDEKEYKQFNEEFTEAKNSVSADREELAEEIAEKIEKNL 478 (978)
Q Consensus 399 a~~~i~~~~~~~~~~~~~~~~~~l~~~a~~Glr~l~~A~r~l~~~e~~~~~~~~~~a~~~l~~~r~~~~~~~~~~ie~dl 478 (978)
.+..+.+.-. .... .....+.+..+|..++.++ .|-
T Consensus 491 ~~~~~~~~~~----~~~~-~~~~~~~~~~~G~t~v~va---------------------------------------~dg 526 (713)
T COG2217 491 NARLLGEEGI----DLPL-LSERIEALESEGKTVVFVA---------------------------------------VDG 526 (713)
T ss_pred CHHHHhhcCC----Cccc-hhhhHHHHHhcCCeEEEEE---------------------------------------ECC
Confidence 8766543211 1111 5566778889999988888 466
Q ss_pred EEEEEEeeccccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCccccCceEEEEecCCCcccccchhhhHHHHH
Q 002029 479 ILLGATAVEDKLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQGMRQVIISSETPESKTLEKSEDKSAAA 558 (978)
Q Consensus 479 ~llG~i~ieD~lr~~v~~~I~~L~~aGIkv~mlTGD~~~tA~~ia~~~gl~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~ 558 (978)
+++|+++++|++|++++++|++||+.||++.|||||+..+|..||+++||..
T Consensus 527 ~~~g~i~~~D~~R~~a~~aI~~L~~~Gi~~~mLTGDn~~~A~~iA~~lGId~---------------------------- 578 (713)
T COG2217 527 KLVGVIALADELRPDAKEAIAALKALGIKVVMLTGDNRRTAEAIAKELGIDE---------------------------- 578 (713)
T ss_pred EEEEEEEEeCCCChhHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcChHh----------------------------
Confidence 8999999999999999999999999999999999999999999999999821
Q ss_pred HHHHHHHHHHHHhhhhhhccccCCCCCeEEEEcCchhhhhchhhHHHHHHHHHhccCeeEEEeCCchhHHHHHHHHHccC
Q 002029 559 AALKASVLHQLIRGKELLDSSNESLGPLALIIDGKSLTYALEDDVKDLFLELAIGCASVICCRSSPKQKALVTRLVKTKT 638 (978)
Q Consensus 559 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~f~~l~~~~~~vi~~r~sP~qK~~iV~~lk~~~ 638 (978)
+.+.+.|++|.++|+.+|+ .
T Consensus 579 -----------------------------------------------------------v~AellPedK~~~V~~l~~-~ 598 (713)
T COG2217 579 -----------------------------------------------------------VRAELLPEDKAEIVRELQA-E 598 (713)
T ss_pred -----------------------------------------------------------heccCCcHHHHHHHHHHHh-c
Confidence 8899999999999999997 8
Q ss_pred CCeEEEEcCCcCCHHHhhhcccccccc-CCccchhccccceehhch--hhhHHHHHHhhhhhhhHhhHhHHHHHHHHHHH
Q 002029 639 SSTTLAIGDGANDVGMLQEADIGVGIS-GVEGMQAVMSSDIAIAQF--RFLERLLLVHGHWCYRRISSMICYFFYKNIAF 715 (978)
Q Consensus 639 ~~~v~aiGDG~ND~~ml~~AdvGI~i~-g~e~~~a~~asD~vi~~f--~~l~~lll~~gR~~~~~i~~~i~~~~~~n~~~ 715 (978)
|++|+|+|||.||+|+|.+|||||+|. |++. |.++||+++++. +.+..+ +..+|..++++++++.|.|.+|.++
T Consensus 599 g~~VamVGDGINDAPALA~AdVGiAmG~GtDv--A~eaADvvL~~~dL~~v~~a-i~lsr~t~~~IkqNl~~A~~yn~~~ 675 (713)
T COG2217 599 GRKVAMVGDGINDAPALAAADVGIAMGSGTDV--AIEAADVVLMRDDLSAVPEA-IDLSRATRRIIKQNLFWAFGYNAIA 675 (713)
T ss_pred CCEEEEEeCCchhHHHHhhcCeeEeecCCcHH--HHHhCCEEEecCCHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999995 4555 999999999984 447777 8999999999999999999999988
Q ss_pred HHHHHHH
Q 002029 716 GFTLFFF 722 (978)
Q Consensus 716 ~~~~~~~ 722 (978)
+.+..+.
T Consensus 676 iplA~~g 682 (713)
T COG2217 676 IPLAAGG 682 (713)
T ss_pred HHHHHHh
Confidence 7666544
No 27
>PRK11033 zntA zinc/cadmium/mercury/lead-transporting ATPase; Provisional
Probab=100.00 E-value=2.5e-47 Score=463.55 Aligned_cols=413 Identities=20% Similarity=0.219 Sum_probs=322.7
Q ss_pred EEEEEEC-----CccccC--CcCceeecCceeccCCeEEEEEEEeCccchh---ccccCCCCCCcCHHHHHHHHHHHHHH
Q 002029 27 VGSLELE-----EQQYPL--TPQQLLLRDSKLRNTDCIYGAVIFTGRDTKV---FQNSTGPPSKRSKVERRMDKIIYFLF 96 (978)
Q Consensus 27 ~G~~~~~-----~~~~pl--~~~n~l~~Gs~l~~tg~~~gvVv~tG~~Tki---~~~~~~~~~k~s~l~~~~n~~~~~~~ 96 (978)
+|...+| ||+.|+ .+++.+++||.+.+ |.+.+.|+.+|.+|.+ .....++..+++|+|+.++++..++.
T Consensus 283 ~g~~~vdes~lTGEs~Pv~k~~Gd~V~aGt~~~~-G~~~i~V~~~g~~s~l~~I~~lv~~a~~~k~~~q~~~d~~a~~~~ 361 (741)
T PRK11033 283 SPFASFDESALTGESIPVERATGEKVPAGATSVD-RLVTLEVLSEPGASAIDRILHLIEEAEERRAPIERFIDRFSRIYT 361 (741)
T ss_pred ECcEEeecccccCCCCCEecCCCCeeccCCEEcC-ceEEEEEEeccccCHHHHHHHHHHHhhccCChHHHHHHHHHHHHH
Confidence 4555554 899998 66899999999998 9999999999999954 44456677788999999999999999
Q ss_pred HHHHHHHHHHHHHHHhhhccccccccccccccCCCCCCCcCCchhhHHHHHHHHHHHHHHHhccccchhhhhHHHHHHHH
Q 002029 97 GILVLMSFIGSIFFGIATREDLQDGKMKRWYLRPDDTTAYYDPKRAAVAAVLHFLTALMLYGYLIPISLYVSIEIVKILQ 176 (978)
Q Consensus 97 ~~~~~~~~i~~i~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~iP~sL~v~i~~~~~~~ 176 (978)
++.++++++.++++.++.+. +| ...+.+++++++..|||+|.++.+++....
T Consensus 362 ~~v~~~a~~~~~~~~~~~~~--------~~--------------------~~~i~~a~svlviacPcaL~latP~a~~~~ 413 (741)
T PRK11033 362 PAIMLVALLVILVPPLLFAA--------PW--------------------QEWIYRGLTLLLIGCPCALVISTPAAITSG 413 (741)
T ss_pred HHHHHHHHHHHHHHHHHccC--------CH--------------------HHHHHHHHHHHHHhchhhhhhhhHHHHHHH
Confidence 99999998887765333221 12 114677899999999999988887777666
Q ss_pred HHHHhhccccccccCCCcccccCcccccccccceEEEeeCCcccccCeeEEEEEEECCeeeCCCchHHHHHHHhhcCCCC
Q 002029 177 SIFINQDLHMYYEETDKPARARTSNLNEELGQVDTILSDKTGTLTCNSMEFIKCSIAGTSYGRGVTEVERAMARRKGSPL 256 (978)
Q Consensus 177 ~~~i~~d~~m~~~~~~~~~~~r~~~~~e~Lg~v~~I~sDKTGTLT~n~m~~~~~~i~~~~y~~~~~~~~~~~~~~~~~~~ 256 (978)
.... +++|+++|+.+.+|.|+++++||||||||||+|+|++.++...+.. .
T Consensus 414 l~~a----------ar~gilik~~~alE~l~~v~~v~fDKTGTLT~g~~~v~~~~~~~~~-----~-------------- 464 (741)
T PRK11033 414 LAAA----------ARRGALIKGGAALEQLGRVTTVAFDKTGTLTEGKPQVTDIHPATGI-----S-------------- 464 (741)
T ss_pred HHHH----------HHCCeEEcCcHHHHHhhCCCEEEEeCCCCCcCCceEEEEEEecCCC-----C--------------
Confidence 5533 6789999999999999999999999999999999999988632210 0
Q ss_pred ccchhhhhhcccccCCcccCchhhhcCCCCCCCChHHHHHHHHHHhhhcceeccccCCCCcEEEecCCccHHHHHHHHHH
Q 002029 257 EEEVTEEQEDKASIKGFNFEDERIMNGSWVNEPHADVIQKFLRLLAICHTALPEVDEENGKISYEAESPDEAAFVIAARE 336 (978)
Q Consensus 257 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~lalC~~~~~~~~~~~~~~~y~~~sp~E~Alv~~a~~ 336 (978)
. ++++...+.. + ..+.||.++|+++++++
T Consensus 465 ----------------------------------~---~~~l~~aa~~-----e---------~~s~hPia~Ai~~~a~~ 493 (741)
T PRK11033 465 ----------------------------------E---SELLALAAAV-----E---------QGSTHPLAQAIVREAQV 493 (741)
T ss_pred ----------------------------------H---HHHHHHHHHH-----h---------cCCCCHHHHHHHHHHHh
Confidence 0 1222222211 1 12469999999999987
Q ss_pred cCCEEEeecCceeEEEecCCCCCccceeEeeEeEeecCCCCCceEEE-EEE-eCCCeEEEEEeCCchHHHHHhcccchhh
Q 002029 337 LGFEFYERTQTSISVHELDPVTGTKVERSYSLLNVLEFSSSRKRMSV-IVR-SEEGTLLLLSKGADSVMFERLAENGREF 414 (978)
Q Consensus 337 ~g~~~~~r~~~~~~i~~~~~~~~~~~~~~~~il~~~~F~s~rkrmsv-iv~-~~~~~~~l~~KGa~~~i~~~~~~~~~~~ 414 (978)
.|.. +||.++++.+.- -++ .-+|+.+. -|+++.+.+ .
T Consensus 494 ~~~~-------------------------------~~~~~~~~~~~g~Gv~~~~~g~~~~--ig~~~~~~~-~------- 532 (741)
T PRK11033 494 RGLA-------------------------------IPEAESQRALAGSGIEGQVNGERVL--ICAPGKLPP-L------- 532 (741)
T ss_pred cCCC-------------------------------CCCCcceEEEeeEEEEEEECCEEEE--Eecchhhhh-c-------
Confidence 6532 345555555421 121 11444333 388887644 1
Q ss_pred HHHHHHHHHHHHHccceeEeeEEEeCCHHHHHHHHHHHHHHhhcccccHHHHHHHHHHHhhcccEEEEEEeeccccCCCh
Q 002029 415 EEQTKEHINEYADAGLRTLILAYRELDEKEYKQFNEEFTEAKNSVSADREELAEEIAEKIEKNLILLGATAVEDKLQNGV 494 (978)
Q Consensus 415 ~~~~~~~l~~~a~~Glr~l~~A~r~l~~~e~~~~~~~~~~a~~~l~~~r~~~~~~~~~~ie~dl~llG~i~ieD~lr~~v 494 (978)
.+...+.++.+..+|+|++++| .|.+++|+++++|++|+|+
T Consensus 533 ~~~~~~~~~~~~~~g~~~v~va---------------------------------------~~~~~~g~i~l~d~~r~~a 573 (741)
T PRK11033 533 ADAFAGQINELESAGKTVVLVL---------------------------------------RNDDVLGLIALQDTLRADA 573 (741)
T ss_pred cHHHHHHHHHHHhCCCEEEEEE---------------------------------------ECCEEEEEEEEecCCchhH
Confidence 1334556678899999999999 3568999999999999999
Q ss_pred HHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCccccCceEEEEecCCCcccccchhhhHHHHHHHHHHHHHHHHHhhhh
Q 002029 495 PECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQGMRQVIISSETPESKTLEKSEDKSAAAAALKASVLHQLIRGKE 574 (978)
Q Consensus 495 ~~~I~~L~~aGIkv~mlTGD~~~tA~~ia~~~gl~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 574 (978)
+++|++|+++|++++|+|||+..+|..+|+++||.
T Consensus 574 ~~~i~~L~~~gi~~~llTGd~~~~a~~ia~~lgi~--------------------------------------------- 608 (741)
T PRK11033 574 RQAISELKALGIKGVMLTGDNPRAAAAIAGELGID--------------------------------------------- 608 (741)
T ss_pred HHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCC---------------------------------------------
Confidence 99999999999999999999999999999999982
Q ss_pred hhccccCCCCCeEEEEcCchhhhhchhhHHHHHHHHHhccCeeEEEeCCchhHHHHHHHHHccCCCeEEEEcCCcCCHHH
Q 002029 575 LLDSSNESLGPLALIIDGKSLTYALEDDVKDLFLELAIGCASVICCRSSPKQKALVTRLVKTKTSSTTLAIGDGANDVGM 654 (978)
Q Consensus 575 ~~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~f~~l~~~~~~vi~~r~sP~qK~~iV~~lk~~~~~~v~aiGDG~ND~~m 654 (978)
.+++..|++|..+|+.+++ . +.|+|+|||.||+||
T Consensus 609 -------------------------------------------~~~~~~p~~K~~~v~~l~~-~-~~v~mvGDgiNDapA 643 (741)
T PRK11033 609 -------------------------------------------FRAGLLPEDKVKAVTELNQ-H-APLAMVGDGINDAPA 643 (741)
T ss_pred -------------------------------------------eecCCCHHHHHHHHHHHhc-C-CCEEEEECCHHhHHH
Confidence 3456789999999999986 3 589999999999999
Q ss_pred hhhccccccccCCccchhccccceehhc--hhhhHHHHHHhhhhhhhHhhHhHHHHHHHHHHHHHHHH
Q 002029 655 LQEADIGVGISGVEGMQAVMSSDIAIAQ--FRFLERLLLVHGHWCYRRISSMICYFFYKNIAFGFTLF 720 (978)
Q Consensus 655 l~~AdvGI~i~g~e~~~a~~asD~vi~~--f~~l~~lll~~gR~~~~~i~~~i~~~~~~n~~~~~~~~ 720 (978)
|++|||||++.+. ...++++||+++.+ +..+..+ +..||..+++|++++.|.+.+|.+++.+.+
T Consensus 644 l~~A~vgia~g~~-~~~a~~~adivl~~~~l~~l~~~-i~~sr~~~~~I~~nl~~a~~~n~~~i~~a~ 709 (741)
T PRK11033 644 MKAASIGIAMGSG-TDVALETADAALTHNRLRGLAQM-IELSRATHANIRQNITIALGLKAIFLVTTL 709 (741)
T ss_pred HHhCCeeEEecCC-CHHHHHhCCEEEecCCHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999532 33378999999986 4447766 899999999999999999999987665544
No 28
>KOG0207 consensus Cation transport ATPase [Inorganic ion transport and metabolism]
Probab=100.00 E-value=4.2e-47 Score=435.25 Aligned_cols=438 Identities=20% Similarity=0.219 Sum_probs=338.8
Q ss_pred eEEEEEEC-----CccccC--CcCceeecCceeccCCeEEEEEEEeCccchh---ccccCCCCCCcCHHHHHHHHHHHHH
Q 002029 26 FVGSLELE-----EQQYPL--TPQQLLLRDSKLRNTDCIYGAVIFTGRDTKV---FQNSTGPPSKRSKVERRMDKIIYFL 95 (978)
Q Consensus 26 f~G~~~~~-----~~~~pl--~~~n~l~~Gs~l~~tg~~~gvVv~tG~~Tki---~~~~~~~~~k~s~l~~~~n~~~~~~ 95 (978)
.+|+-.+| ||++|+ .++..+.+||...| |..+.-++.+|.||.+ .+..++++..+.|+|+.+|+++.++
T Consensus 418 v~Gss~VDEs~iTGEs~PV~Kk~gs~ViaGsiN~n-G~l~VkaT~~g~dttla~IvkLVEEAQ~sKapiQq~aDkia~yF 496 (951)
T KOG0207|consen 418 VDGSSEVDESLITGESMPVPKKKGSTVIAGSINLN-GTLLVKATKVGGDTTLAQIVKLVEEAQLSKAPIQQLADKIAGYF 496 (951)
T ss_pred EeCceeechhhccCCceecccCCCCeeeeeeecCC-ceEEEEEEeccccchHHHHHHHHHHHHcccchHHHHHHHhhhcC
Confidence 45666665 899998 78999999999998 9999999999999955 5556788888999999999999999
Q ss_pred HHHHHHHHHHHHHHHHhhhccccccccccccccCCCCCCCcCCchhhHHHHHHHHHHHHHHHhccccchhhhhHHHHHHH
Q 002029 96 FGILVLMSFIGSIFFGIATREDLQDGKMKRWYLRPDDTTAYYDPKRAAVAAVLHFLTALMLYGYLIPISLYVSIEIVKIL 175 (978)
Q Consensus 96 ~~~~~~~~~i~~i~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~iP~sL~v~i~~~~~~ 175 (978)
.++++++++..+++|.+..... .|| +..+...+...|..++.+++.+|||+|.++.+.+.+.
T Consensus 497 vP~Vi~lS~~t~~~w~~~g~~~-------~~~-----------~~~~~~~~~~a~~~aisVlviACPCaLgLATPtAvmv 558 (951)
T KOG0207|consen 497 VPVVIVLSLATFVVWILIGKIV-------FKY-----------PRSFFDAFSHAFQLAISVLVIACPCALGLATPTAVMV 558 (951)
T ss_pred CchhhHHHHHHHHHHHHHcccc-------ccC-----------cchhhHHHHHHHHhhheEEEEECchhhhcCCceEEEE
Confidence 9999999999888877655433 122 1111234456888999999999999999988877665
Q ss_pred HHHHHhhccccccccCCCcccccCcccccccccceEEEeeCCcccccCeeEEEEEEECCeeeCCCchHHHHHHHhhcCCC
Q 002029 176 QSIFINQDLHMYYEETDKPARARTSNLNEELGQVDTILSDKTGTLTCNSMEFIKCSIAGTSYGRGVTEVERAMARRKGSP 255 (978)
Q Consensus 176 ~~~~i~~d~~m~~~~~~~~~~~r~~~~~e~Lg~v~~I~sDKTGTLT~n~m~~~~~~i~~~~y~~~~~~~~~~~~~~~~~~ 255 (978)
+.-.. +.+|+++|..+.+|.+.+|++|.||||||||+|++.+.++.+.+...
T Consensus 559 atgvg----------A~nGvLIKGge~LE~~hkv~tVvFDKTGTLT~G~~~V~~~~~~~~~~------------------ 610 (951)
T KOG0207|consen 559 ATGVG----------ATNGVLIKGGEALEKAHKVKTVVFDKTGTLTEGKPTVVDFKSLSNPI------------------ 610 (951)
T ss_pred Eechh----------hhcceEEcCcHHHHHHhcCCEEEEcCCCceecceEEEEEEEecCCcc------------------
Confidence 54422 67899999999999999999999999999999999999987544320
Q ss_pred CccchhhhhhcccccCCcccCchhhhcCCCCCCCChHHHHHHHHHHhhhcceeccccCCCCcEEEecCCccHHHHHHHHH
Q 002029 256 LEEEVTEEQEDKASIKGFNFEDERIMNGSWVNEPHADVIQKFLRLLAICHTALPEVDEENGKISYEAESPDEAAFVIAAR 335 (978)
Q Consensus 256 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~lalC~~~~~~~~~~~~~~~y~~~sp~E~Alv~~a~ 335 (978)
..++++...+. .+-.++||...|++++|+
T Consensus 611 -------------------------------------~~~e~l~~v~a--------------~Es~SeHPig~AIv~yak 639 (951)
T KOG0207|consen 611 -------------------------------------SLKEALALVAA--------------MESGSEHPIGKAIVDYAK 639 (951)
T ss_pred -------------------------------------cHHHHHHHHHH--------------HhcCCcCchHHHHHHHHH
Confidence 01223222221 111357999999999999
Q ss_pred HcCCEEEeecCceeEEEecCCCCCccceeEeeEeEeecCCCCCceEEEEEEeCCCeEEEEEeCCchHHHHHhcccchhhH
Q 002029 336 ELGFEFYERTQTSISVHELDPVTGTKVERSYSLLNVLEFSSSRKRMSVIVRSEEGTLLLLSKGADSVMFERLAENGREFE 415 (978)
Q Consensus 336 ~~g~~~~~r~~~~~~i~~~~~~~~~~~~~~~~il~~~~F~s~rkrmsviv~~~~~~~~l~~KGa~~~i~~~~~~~~~~~~ 415 (978)
+.+ ..++...+.... .|..+.+...+.+ ++.- .+-|.-+.|. +++....
T Consensus 640 ~~~-----~~~~~~~~~~~~-----------------~~pg~g~~~~~~~---~~~~--i~iGN~~~~~----r~~~~~~ 688 (951)
T KOG0207|consen 640 EKL-----VEPNPEGVLSFE-----------------YFPGEGIYVTVTV---DGNE--VLIGNKEWMS----RNGCSIP 688 (951)
T ss_pred hcc-----cccCccccceee-----------------cccCCCcccceEE---eeeE--EeechHHHHH----hcCCCCc
Confidence 876 111111111111 1222222211222 1221 2236654443 2333345
Q ss_pred HHHHHHHHHHHHccceeEeeEEEeCCHHHHHHHHHHHHHHhhcccccHHHHHHHHHHHhhcccEEEEEEeeccccCCChH
Q 002029 416 EQTKEHINEYADAGLRTLILAYRELDEKEYKQFNEEFTEAKNSVSADREELAEEIAEKIEKNLILLGATAVEDKLQNGVP 495 (978)
Q Consensus 416 ~~~~~~l~~~a~~Glr~l~~A~r~l~~~e~~~~~~~~~~a~~~l~~~r~~~~~~~~~~ie~dl~llG~i~ieD~lr~~v~ 495 (978)
++++..+++-...|..+.++| -|-++.|+++++|++|+|+.
T Consensus 689 ~~i~~~~~~~e~~g~tvv~v~---------------------------------------vn~~l~gv~~l~D~vr~~a~ 729 (951)
T KOG0207|consen 689 DDILDALTESERKGQTVVYVA---------------------------------------VNGQLVGVFALEDQVRPDAA 729 (951)
T ss_pred hhHHHhhhhHhhcCceEEEEE---------------------------------------ECCEEEEEEEeccccchhHH
Confidence 567888888899999999999 47789999999999999999
Q ss_pred HHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCccccCceEEEEecCCCcccccchhhhHHHHHHHHHHHHHHHHHhhhhh
Q 002029 496 ECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQGMRQVIISSETPESKTLEKSEDKSAAAAALKASVLHQLIRGKEL 575 (978)
Q Consensus 496 ~~I~~L~~aGIkv~mlTGD~~~tA~~ia~~~gl~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 575 (978)
.+|+.|++.||++.|||||+..+|.++|+++|+-
T Consensus 730 ~av~~Lk~~Gi~v~mLTGDn~~aA~svA~~VGi~---------------------------------------------- 763 (951)
T KOG0207|consen 730 LAVAELKSMGIKVVMLTGDNDAAARSVAQQVGID---------------------------------------------- 763 (951)
T ss_pred HHHHHHHhcCceEEEEcCCCHHHHHHHHHhhCcc----------------------------------------------
Confidence 9999999999999999999999999999999951
Q ss_pred hccccCCCCCeEEEEcCchhhhhchhhHHHHHHHHHhccCeeEEEeCCchhHHHHHHHHHccCCCeEEEEcCCcCCHHHh
Q 002029 576 LDSSNESLGPLALIIDGKSLTYALEDDVKDLFLELAIGCASVICCRSSPKQKALVTRLVKTKTSSTTLAIGDGANDVGML 655 (978)
Q Consensus 576 ~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~f~~l~~~~~~vi~~r~sP~qK~~iV~~lk~~~~~~v~aiGDG~ND~~ml 655 (978)
.|+|.+.|+||++.|+.+|+ .+..|+|+|||.||+|+|
T Consensus 764 -----------------------------------------~V~aev~P~~K~~~Ik~lq~-~~~~VaMVGDGINDaPAL 801 (951)
T KOG0207|consen 764 -----------------------------------------NVYAEVLPEQKAEKIKEIQK-NGGPVAMVGDGINDAPAL 801 (951)
T ss_pred -----------------------------------------eEEeccCchhhHHHHHHHHh-cCCcEEEEeCCCCccHHH
Confidence 19999999999999999998 789999999999999999
Q ss_pred hhccccccccCCccchhccccceehhchh--hhHHHHHHhhhhhhhHhhHhHHHHHHHHHHHHHHHHH
Q 002029 656 QEADIGVGISGVEGMQAVMSSDIAIAQFR--FLERLLLVHGHWCYRRISSMICYFFYKNIAFGFTLFF 721 (978)
Q Consensus 656 ~~AdvGI~i~g~e~~~a~~asD~vi~~f~--~l~~lll~~gR~~~~~i~~~i~~~~~~n~~~~~~~~~ 721 (978)
.+|||||+|.... .-|.++||++++..+ .+... +..+|+..+|++.++.|.+.+|++.+.+...
T Consensus 802 A~AdVGIaig~gs-~vAieaADIVLmrn~L~~v~~a-i~LSrkt~~rIk~N~~~A~~yn~~~IpIAag 867 (951)
T KOG0207|consen 802 AQADVGIAIGAGS-DVAIEAADIVLMRNDLRDVPFA-IDLSRKTVKRIKLNFVWALIYNLVGIPIAAG 867 (951)
T ss_pred Hhhccceeecccc-HHHHhhCCEEEEccchhhhHHH-HHHHHHHHhhHHHHHHHHHHHHHhhhhhhee
Confidence 9999999994432 239999999999754 35555 7899999999999999999999987655443
No 29
>TIGR01525 ATPase-IB_hvy heavy metal translocating P-type ATPase. This alignment encompasses two equivalog models for the copper and cadmium-type heavy metal transporting P-type ATPases (TIGR01511 and TIGR01512) as well as those species which score ambiguously between both models. For more comments and references, see the files on TIGR01511 and 01512.
Probab=100.00 E-value=2.8e-46 Score=444.42 Aligned_cols=421 Identities=20% Similarity=0.245 Sum_probs=325.3
Q ss_pred EEEEEEC-----CccccC--CcCceeecCceeccCCeEEEEEEEeCccchhcc---ccCCCCCCcCHHHHHHHHHHHHHH
Q 002029 27 VGSLELE-----EQQYPL--TPQQLLLRDSKLRNTDCIYGAVIFTGRDTKVFQ---NSTGPPSKRSKVERRMDKIIYFLF 96 (978)
Q Consensus 27 ~G~~~~~-----~~~~pl--~~~n~l~~Gs~l~~tg~~~gvVv~tG~~Tki~~---~~~~~~~k~s~l~~~~n~~~~~~~ 96 (978)
+|...+| ||+.|+ .+++.+++||.+.+ |.++++|+.||.+|++.+ ....++.+++++++.+++++.++.
T Consensus 96 ~g~~~vdes~lTGEs~pv~k~~g~~v~aGt~v~~-g~~~~~v~~~g~~t~~~~i~~~~~~~~~~~~~~~~~~~~~a~~~~ 174 (556)
T TIGR01525 96 SGESEVDESALTGESMPVEKKEGDEVFAGTINGD-GSLTIRVTKLGEDSTLAQIVKLVEEAQSSKAPIQRLADRIASYYV 174 (556)
T ss_pred ecceEEeehhccCCCCCEecCCcCEEeeceEECC-ceEEEEEEEecccCHHHHHHHHHHHHhhcCCcHHHHHHHHHHHHH
Confidence 4555554 888887 77899999999997 999999999999996643 334456678999999999999999
Q ss_pred HHHHHHHHHHHHHHHhhhccccccccccccccCCCCCCCcCCchhhHHHHHHHHHHHHHHHhccccchhhhhHHHHHHHH
Q 002029 97 GILVLMSFIGSIFFGIATREDLQDGKMKRWYLRPDDTTAYYDPKRAAVAAVLHFLTALMLYGYLIPISLYVSIEIVKILQ 176 (978)
Q Consensus 97 ~~~~~~~~i~~i~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~iP~sL~v~i~~~~~~~ 176 (978)
++.++++++.++++.+.... ..+..++++++..||++|+++++++...+
T Consensus 175 ~~~l~~a~~~~~~~~~~~~~-------------------------------~~~~~~~~vlv~~~P~al~l~~~~~~~~~ 223 (556)
T TIGR01525 175 PAVLAIALLTFVVWLALGAL-------------------------------GALYRALAVLVVACPCALGLATPVAILVA 223 (556)
T ss_pred HHHHHHHHHHHHHHHHhccc-------------------------------hHHHHHHHHHhhccccchhehhHHHHHHH
Confidence 98888888776655432110 26888999999999999999999998888
Q ss_pred HHHHhhccccccccCCCcccccCcccccccccceEEEeeCCcccccCeeEEEEEEECCeeeCCCchHHHHHHHhhcCCCC
Q 002029 177 SIFINQDLHMYYEETDKPARARTSNLNEELGQVDTILSDKTGTLTCNSMEFIKCSIAGTSYGRGVTEVERAMARRKGSPL 256 (978)
Q Consensus 177 ~~~i~~d~~m~~~~~~~~~~~r~~~~~e~Lg~v~~I~sDKTGTLT~n~m~~~~~~i~~~~y~~~~~~~~~~~~~~~~~~~ 256 (978)
.. +| .++++++|+++.+|.||++|++|||||||||+|+|++.++...+... .
T Consensus 224 ~~------~~----~~~gilvk~~~~le~l~~v~~i~fDKTGTLT~~~~~v~~~~~~~~~~---~--------------- 275 (556)
T TIGR01525 224 IG------VA----ARRGILIKGGDALEKLAKVKTVVFDKTGTLTTGKPTVVDVEPLDDAS---I--------------- 275 (556)
T ss_pred HH------HH----HHCCceecCchHHHHhhcCCEEEEeCCCCCcCCceEEEEEEecCCCC---c---------------
Confidence 87 55 88999999999999999999999999999999999999886432210 0
Q ss_pred ccchhhhhhcccccCCcccCchhhhcCCCCCCCChHHHHHHHHHHhhhcceeccccCCCCcEEEecCCccHHHHHHHHHH
Q 002029 257 EEEVTEEQEDKASIKGFNFEDERIMNGSWVNEPHADVIQKFLRLLAICHTALPEVDEENGKISYEAESPDEAAFVIAARE 336 (978)
Q Consensus 257 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~lalC~~~~~~~~~~~~~~~y~~~sp~E~Alv~~a~~ 336 (978)
. ..+++..++.+.. .+.||.+.|+++++++
T Consensus 276 ---------------------------------~---~~~~l~~a~~~e~--------------~~~hp~~~Ai~~~~~~ 305 (556)
T TIGR01525 276 ---------------------------------S---EEELLALAAALEQ--------------SSSHPLARAIVRYAKK 305 (556)
T ss_pred ---------------------------------c---HHHHHHHHHHHhc--------------cCCChHHHHHHHHHHh
Confidence 0 0122332222211 2369999999999998
Q ss_pred cCCEEEeecCceeEEEecCCCCCccceeEeeEeEeecCCCCCceEEEEEEeCCCeEEEEEeCCchHHHHHhcccchhhHH
Q 002029 337 LGFEFYERTQTSISVHELDPVTGTKVERSYSLLNVLEFSSSRKRMSVIVRSEEGTLLLLSKGADSVMFERLAENGREFEE 416 (978)
Q Consensus 337 ~g~~~~~r~~~~~~i~~~~~~~~~~~~~~~~il~~~~F~s~rkrmsviv~~~~~~~~l~~KGa~~~i~~~~~~~~~~~~~ 416 (978)
.|..... + + -...+ ..+++...+ +|. .-+..|+++.+ + . .. ....
T Consensus 306 ~~~~~~~--~-------------------~-~~~~~----~~~gi~~~~---~g~-~~~~lg~~~~~-~-~--~~-~~~~ 350 (556)
T TIGR01525 306 RGLELPK--Q-------------------E-DVEEV----PGKGVEATV---DGQ-EEVRIGNPRLL-E-L--AA-EPIS 350 (556)
T ss_pred cCCCccc--c-------------------c-CeeEe----cCCeEEEEE---CCe-eEEEEecHHHH-h-h--cC-CCch
Confidence 7653211 0 0 00001 122233222 231 12333776655 1 1 11 1122
Q ss_pred HHHHHHHHHHHccceeEeeEEEeCCHHHHHHHHHHHHHHhhcccccHHHHHHHHHHHhhcccEEEEEEeeccccCCChHH
Q 002029 417 QTKEHINEYADAGLRTLILAYRELDEKEYKQFNEEFTEAKNSVSADREELAEEIAEKIEKNLILLGATAVEDKLQNGVPE 496 (978)
Q Consensus 417 ~~~~~l~~~a~~Glr~l~~A~r~l~~~e~~~~~~~~~~a~~~l~~~r~~~~~~~~~~ie~dl~llG~i~ieD~lr~~v~~ 496 (978)
+..+.++.++.+|+|++.+| .|.+++|.+.++|+++||+++
T Consensus 351 ~~~~~~~~~~~~g~~~~~v~---------------------------------------~~~~~~g~i~~~d~~~~g~~e 391 (556)
T TIGR01525 351 ASPDLLNEGESQGKTVVFVA---------------------------------------VDGELLGVIALRDQLRPEAKE 391 (556)
T ss_pred hhHHHHHHHhhCCcEEEEEE---------------------------------------ECCEEEEEEEecccchHhHHH
Confidence 33456778899999999999 466899999999999999999
Q ss_pred HHHHHHHcC-CeEEEEcCCChhhHHHHHHHcCccccCceEEEEecCCCcccccchhhhHHHHHHHHHHHHHHHHHhhhhh
Q 002029 497 CIDKLAQAG-IKLWVLTGDKMETAINIGFACSLLRQGMRQVIISSETPESKTLEKSEDKSAAAAALKASVLHQLIRGKEL 575 (978)
Q Consensus 497 ~I~~L~~aG-Ikv~mlTGD~~~tA~~ia~~~gl~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 575 (978)
+|+.|+++| ++++|+|||+..+|..+++++|+-.
T Consensus 392 ~l~~L~~~g~i~v~ivTgd~~~~a~~i~~~lgi~~--------------------------------------------- 426 (556)
T TIGR01525 392 AIAALKRAGGIKLVMLTGDNRSAAEAVAAELGIDE--------------------------------------------- 426 (556)
T ss_pred HHHHHHHcCCCeEEEEeCCCHHHHHHHHHHhCCCe---------------------------------------------
Confidence 999999999 9999999999999999999999821
Q ss_pred hccccCCCCCeEEEEcCchhhhhchhhHHHHHHHHHhccCeeEEEeCCchhHHHHHHHHHccCCCeEEEEcCCcCCHHHh
Q 002029 576 LDSSNESLGPLALIIDGKSLTYALEDDVKDLFLELAIGCASVICCRSSPKQKALVTRLVKTKTSSTTLAIGDGANDVGML 655 (978)
Q Consensus 576 ~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~f~~l~~~~~~vi~~r~sP~qK~~iV~~lk~~~~~~v~aiGDG~ND~~ml 655 (978)
+|+++.|++|..+++.+++ .++.|+|+|||.||++|+
T Consensus 427 ------------------------------------------~f~~~~p~~K~~~v~~l~~-~~~~v~~vGDg~nD~~al 463 (556)
T TIGR01525 427 ------------------------------------------VHAELLPEDKLAIVKELQE-EGGVVAMVGDGINDAPAL 463 (556)
T ss_pred ------------------------------------------eeccCCHHHHHHHHHHHHH-cCCEEEEEECChhHHHHH
Confidence 7788899999999999997 778999999999999999
Q ss_pred hhccccccccCCccchhccccceehhc--hhhhHHHHHHhhhhhhhHhhHhHHHHHHHHHHHHHHHHH
Q 002029 656 QEADIGVGISGVEGMQAVMSSDIAIAQ--FRFLERLLLVHGHWCYRRISSMICYFFYKNIAFGFTLFF 721 (978)
Q Consensus 656 ~~AdvGI~i~g~e~~~a~~asD~vi~~--f~~l~~lll~~gR~~~~~i~~~i~~~~~~n~~~~~~~~~ 721 (978)
++|||||++.+ ....++..||+++.+ +..+..+ +..||..++++++++.|.+..|++.+.+.++
T Consensus 464 ~~A~vgia~g~-~~~~~~~~Ad~vi~~~~~~~l~~~-i~~~r~~~~~i~~nl~~a~~~N~~~i~~a~~ 529 (556)
T TIGR01525 464 AAADVGIAMGA-GSDVAIEAADIVLLNDDLSSLPTA-IDLSRKTRRIIKQNLAWALGYNLVAIPLAAG 529 (556)
T ss_pred hhCCEeEEeCC-CCHHHHHhCCEEEeCCCHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999998853 333477899999995 6668888 8999999999999999999999988755543
No 30
>TIGR01512 ATPase-IB2_Cd heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase. .
Probab=100.00 E-value=2.7e-44 Score=424.59 Aligned_cols=401 Identities=19% Similarity=0.245 Sum_probs=312.7
Q ss_pred EEEEEEC-----CccccC--CcCceeecCceeccCCeEEEEEEEeCccchhc---cccCCCCCCcCHHHHHHHHHHHHHH
Q 002029 27 VGSLELE-----EQQYPL--TPQQLLLRDSKLRNTDCIYGAVIFTGRDTKVF---QNSTGPPSKRSKVERRMDKIIYFLF 96 (978)
Q Consensus 27 ~G~~~~~-----~~~~pl--~~~n~l~~Gs~l~~tg~~~gvVv~tG~~Tki~---~~~~~~~~k~s~l~~~~n~~~~~~~ 96 (978)
+|...+| ||+.|+ .+++.+|+||.+.+ |.++++|+.||.+|.+. .....++.+++++++.+++++.++.
T Consensus 95 ~g~~~vdes~lTGEs~pv~k~~g~~v~aGt~v~~-G~~~~~V~~~g~~t~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~ 173 (536)
T TIGR01512 95 SGTSTVDESALTGESVPVEKAPGDEVFAGAINLD-GVLTIVVTKLPADSTIAKIVNLVEEAQSRKAKTQRFIDRFARYYT 173 (536)
T ss_pred eCcEEEEecccCCCCCcEEeCCCCEEEeeeEECC-ceEEEEEEEeccccHHHHHHHHHHHHhhCCChHHHHHHHHHHHHH
Confidence 4545554 888887 77899999999997 99999999999999664 3344556678999999999999999
Q ss_pred HHHHHHHHHHHHHHHhhhccccccccccccccCCCCCCCcCCchhhHHHHHHHHHHHHHHHhccccchhhhhHHHHHHHH
Q 002029 97 GILVLMSFIGSIFFGIATREDLQDGKMKRWYLRPDDTTAYYDPKRAAVAAVLHFLTALMLYGYLIPISLYVSIEIVKILQ 176 (978)
Q Consensus 97 ~~~~~~~~i~~i~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~iP~sL~v~i~~~~~~~ 176 (978)
++.++++++.++.+.+... | ...+.+++++++.+|||+|+++++++...+
T Consensus 174 ~~~~~~~~~~~~~~~~~~~----------~--------------------~~~~~~~~svlv~~~P~aL~la~~~~~~~~ 223 (536)
T TIGR01512 174 PVVLAIALAIWLVPGLLKR----------W--------------------PFWVYRALVLLVVASPCALVISAPAAYLSA 223 (536)
T ss_pred HHHHHHHHHHHHHHHHhcc----------c--------------------HHHHHHHHHHHhhcCccccccchHHHHHHH
Confidence 9888888776655432211 1 115778899999999999999999999888
Q ss_pred HHHHhhccccccccCCCcccccCcccccccccceEEEeeCCcccccCeeEEEEEEECCeeeCCCchHHHHHHHhhcCCCC
Q 002029 177 SIFINQDLHMYYEETDKPARARTSNLNEELGQVDTILSDKTGTLTCNSMEFIKCSIAGTSYGRGVTEVERAMARRKGSPL 256 (978)
Q Consensus 177 ~~~i~~d~~m~~~~~~~~~~~r~~~~~e~Lg~v~~I~sDKTGTLT~n~m~~~~~~i~~~~y~~~~~~~~~~~~~~~~~~~ 256 (978)
.. +| .++++++|+++.+|.||+++++|||||||||+|+|++.++...
T Consensus 224 ~~------~~----~k~gilik~~~~le~l~~v~~i~fDKTGTLT~~~~~v~~~~~~----------------------- 270 (536)
T TIGR01512 224 IS------AA----ARHGILIKGGAALEALAKIKTVAFDKTGTLTTGRPKVVDVVPA----------------------- 270 (536)
T ss_pred HH------HH----HHCCeEEcCcHHHHhhcCCCEEEECCCCCCcCCceEEEEeeHH-----------------------
Confidence 77 55 8899999999999999999999999999999999999876310
Q ss_pred ccchhhhhhcccccCCcccCchhhhcCCCCCCCChHHHHHHHHHHhhhcceeccccCCCCcEEEecCCccHHHHHHHHHH
Q 002029 257 EEEVTEEQEDKASIKGFNFEDERIMNGSWVNEPHADVIQKFLRLLAICHTALPEVDEENGKISYEAESPDEAAFVIAARE 336 (978)
Q Consensus 257 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~lalC~~~~~~~~~~~~~~~y~~~sp~E~Alv~~a~~ 336 (978)
+++...+.+. . .+.||.+.|+++++++
T Consensus 271 ---------------------------------------~~l~~a~~~e-----~---------~~~hp~~~Ai~~~~~~ 297 (536)
T TIGR01512 271 ---------------------------------------EVLRLAAAAE-----Q---------ASSHPLARAIVDYARK 297 (536)
T ss_pred ---------------------------------------HHHHHHHHHh-----c---------cCCCcHHHHHHHHHHh
Confidence 1222222111 1 2369999999999987
Q ss_pred cCCEEEeecCceeEEEecCCCCCccceeEeeEeEeecCCCCCceEEEEEEeCCCeEEEEEeCCchHHHHHhcccchhhHH
Q 002029 337 LGFEFYERTQTSISVHELDPVTGTKVERSYSLLNVLEFSSSRKRMSVIVRSEEGTLLLLSKGADSVMFERLAENGREFEE 416 (978)
Q Consensus 337 ~g~~~~~r~~~~~~i~~~~~~~~~~~~~~~~il~~~~F~s~rkrmsviv~~~~~~~~l~~KGa~~~i~~~~~~~~~~~~~ 416 (978)
.+ .+ ... ..+| .+.+...+ +|..++ .|+++.+.+. +
T Consensus 298 ~~-~~----------------------~~~---~~~~----g~gi~~~~---~g~~~~--ig~~~~~~~~----~----- 333 (536)
T TIGR01512 298 RE-NV----------------------ESV---EEVP----GEGVRAVV---DGGEVR--IGNPRSLEAA----V----- 333 (536)
T ss_pred cC-CC----------------------cce---EEec----CCeEEEEE---CCeEEE--EcCHHHHhhc----C-----
Confidence 64 10 000 0111 12222222 333222 3776544221 1
Q ss_pred HHHHHHHHHHHccceeEeeEEEeCCHHHHHHHHHHHHHHhhcccccHHHHHHHHHHHhhcccEEEEEEeeccccCCChHH
Q 002029 417 QTKEHINEYADAGLRTLILAYRELDEKEYKQFNEEFTEAKNSVSADREELAEEIAEKIEKNLILLGATAVEDKLQNGVPE 496 (978)
Q Consensus 417 ~~~~~l~~~a~~Glr~l~~A~r~l~~~e~~~~~~~~~~a~~~l~~~r~~~~~~~~~~ie~dl~llG~i~ieD~lr~~v~~ 496 (978)
...+..+|.+++.++ .|..++|.+.++|++|||+++
T Consensus 334 -----~~~~~~~~~~~~~v~---------------------------------------~~~~~~g~i~~~d~l~~~~~e 369 (536)
T TIGR01512 334 -----GARPESAGKTIVHVA---------------------------------------RDGTYLGYILLSDEPRPDAAE 369 (536)
T ss_pred -----CcchhhCCCeEEEEE---------------------------------------ECCEEEEEEEEeccchHHHHH
Confidence 014567788887776 577899999999999999999
Q ss_pred HHHHHHHcCC-eEEEEcCCChhhHHHHHHHcCccccCceEEEEecCCCcccccchhhhHHHHHHHHHHHHHHHHHhhhhh
Q 002029 497 CIDKLAQAGI-KLWVLTGDKMETAINIGFACSLLRQGMRQVIISSETPESKTLEKSEDKSAAAAALKASVLHQLIRGKEL 575 (978)
Q Consensus 497 ~I~~L~~aGI-kv~mlTGD~~~tA~~ia~~~gl~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 575 (978)
+|+.|+++|+ +++|+|||+..+|..+++++|+..
T Consensus 370 ~i~~L~~~Gi~~v~vvTgd~~~~a~~i~~~lgi~~--------------------------------------------- 404 (536)
T TIGR01512 370 AIAELKALGIEKVVMLTGDRRAVAERVARELGIDE--------------------------------------------- 404 (536)
T ss_pred HHHHHHHcCCCcEEEEcCCCHHHHHHHHHHcCChh---------------------------------------------
Confidence 9999999999 999999999999999999999821
Q ss_pred hccccCCCCCeEEEEcCchhhhhchhhHHHHHHHHHhccCeeEEEeCCchhHHHHHHHHHccCCCeEEEEcCCcCCHHHh
Q 002029 576 LDSSNESLGPLALIIDGKSLTYALEDDVKDLFLELAIGCASVICCRSSPKQKALVTRLVKTKTSSTTLAIGDGANDVGML 655 (978)
Q Consensus 576 ~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~f~~l~~~~~~vi~~r~sP~qK~~iV~~lk~~~~~~v~aiGDG~ND~~ml 655 (978)
+|+++.|++|..+++.+++ .++.|+|+|||.||++|+
T Consensus 405 ------------------------------------------~f~~~~p~~K~~~i~~l~~-~~~~v~~vGDg~nD~~al 441 (536)
T TIGR01512 405 ------------------------------------------VHAELLPEDKLEIVKELRE-KYGPVAMVGDGINDAPAL 441 (536)
T ss_pred ------------------------------------------hhhccCcHHHHHHHHHHHh-cCCEEEEEeCCHHHHHHH
Confidence 5678889999999999997 788999999999999999
Q ss_pred hhccccccccCCccchhccccceehh--chhhhHHHHHHhhhhhhhHhhHhHHHHHHHHHHHHHHHHH
Q 002029 656 QEADIGVGISGVEGMQAVMSSDIAIA--QFRFLERLLLVHGHWCYRRISSMICYFFYKNIAFGFTLFF 721 (978)
Q Consensus 656 ~~AdvGI~i~g~e~~~a~~asD~vi~--~f~~l~~lll~~gR~~~~~i~~~i~~~~~~n~~~~~~~~~ 721 (978)
++||+||++.......++.+||+++. ++..+..+ +..||..++++++++.|.+.+|++.+.+.++
T Consensus 442 ~~A~vgia~g~~~~~~~~~~ad~vl~~~~l~~l~~~-i~~~r~~~~~i~~nl~~a~~~n~~~i~~a~~ 508 (536)
T TIGR01512 442 AAADVGIAMGASGSDVAIETADVVLLNDDLSRLPQA-IRLARRTRRIVKQNVVIALGIILLLILLALF 508 (536)
T ss_pred HhCCEEEEeCCCccHHHHHhCCEEEECCCHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999852223347889999994 57778887 8999999999999999999999887666554
No 31
>TIGR01511 ATPase-IB1_Cu copper-(or silver)-translocating P-type ATPase. One member from Halobacterium is annotated as "molybdenum-binding protein" although no evidence can be found for this classification.
Probab=100.00 E-value=4.2e-44 Score=424.19 Aligned_cols=404 Identities=21% Similarity=0.279 Sum_probs=315.2
Q ss_pred EEEEEEC-----CccccC--CcCceeecCceeccCCeEEEEEEEeCccchh---ccccCCCCCCcCHHHHHHHHHHHHHH
Q 002029 27 VGSLELE-----EQQYPL--TPQQLLLRDSKLRNTDCIYGAVIFTGRDTKV---FQNSTGPPSKRSKVERRMDKIIYFLF 96 (978)
Q Consensus 27 ~G~~~~~-----~~~~pl--~~~n~l~~Gs~l~~tg~~~gvVv~tG~~Tki---~~~~~~~~~k~s~l~~~~n~~~~~~~ 96 (978)
+|...+| ||+.|+ .+++.+|+||.+.+ |.+++.|+.||.+|.+ ......++.+++++++.+++++.++.
T Consensus 132 ~g~~~vdes~lTGEs~pv~k~~gd~V~aGt~~~~-g~~~~~v~~~g~~t~~~~i~~~v~~a~~~k~~~~~~~d~~a~~~~ 210 (562)
T TIGR01511 132 EGESEVDESLVTGESLPVPKKVGDPVIAGTVNGT-GSLVVRATATGEDTTLAQIVRLVRQAQQSKAPIQRLADKVAGYFV 210 (562)
T ss_pred ECceEEehHhhcCCCCcEEcCCCCEEEeeeEECC-ceEEEEEEEecCCChHHHHHHHHHHHHhcCCchHHHHHHHHHHHH
Confidence 3444554 898887 77899999999997 9999999999999965 44445666778999999999999998
Q ss_pred HHHHHHHHHHHHHHHhhhccccccccccccccCCCCCCCcCCchhhHHHHHHHHHHHHHHHhccccchhhhhHHHHHHHH
Q 002029 97 GILVLMSFIGSIFFGIATREDLQDGKMKRWYLRPDDTTAYYDPKRAAVAAVLHFLTALMLYGYLIPISLYVSIEIVKILQ 176 (978)
Q Consensus 97 ~~~~~~~~i~~i~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~iP~sL~v~i~~~~~~~ 176 (978)
++.++++++.+++|. ..+.+++++++..|||+|+++++++...+
T Consensus 211 ~~v~~~a~~~~~~~~------------------------------------~~~~~~~svlvvacPcaL~la~p~a~~~~ 254 (562)
T TIGR01511 211 PVVIAIALITFVIWL------------------------------------FALEFAVTVLIIACPCALGLATPTVIAVA 254 (562)
T ss_pred HHHHHHHHHHHHHHH------------------------------------HHHHHHHHHHHHhccchhhhHHHHHHHHH
Confidence 888887776654431 15778999999999999999999999888
Q ss_pred HHHHhhccccccccCCCcccccCcccccccccceEEEeeCCcccccCeeEEEEEEECCeeeCCCchHHHHHHHhhcCCCC
Q 002029 177 SIFINQDLHMYYEETDKPARARTSNLNEELGQVDTILSDKTGTLTCNSMEFIKCSIAGTSYGRGVTEVERAMARRKGSPL 256 (978)
Q Consensus 177 ~~~i~~d~~m~~~~~~~~~~~r~~~~~e~Lg~v~~I~sDKTGTLT~n~m~~~~~~i~~~~y~~~~~~~~~~~~~~~~~~~ 256 (978)
.. ++ +++|+++|+.+.+|.|+++|+||||||||||+|+|++.++...+..
T Consensus 255 ~~------~a----a~~gIlik~~~~lE~l~~v~~i~fDKTGTLT~g~~~v~~i~~~~~~-------------------- 304 (562)
T TIGR01511 255 TG------LA----AKNGVLIKDGDALERAANIDTVVFDKTGTLTQGKPTVTDVHVFGDR-------------------- 304 (562)
T ss_pred HH------HH----HHCCeEEcChHHHHHhhCCCEEEECCCCCCcCCCEEEEEEecCCCC--------------------
Confidence 77 44 7899999999999999999999999999999999999987532210
Q ss_pred ccchhhhhhcccccCCcccCchhhhcCCCCCCCChHHHHHHHHHHhhhcceeccccCCCCcEEEecCCccHHHHHHHHHH
Q 002029 257 EEEVTEEQEDKASIKGFNFEDERIMNGSWVNEPHADVIQKFLRLLAICHTALPEVDEENGKISYEAESPDEAAFVIAARE 336 (978)
Q Consensus 257 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~lalC~~~~~~~~~~~~~~~y~~~sp~E~Alv~~a~~ 336 (978)
.. ++++..++.+. ..+.||.+.|+++++++
T Consensus 305 ---------------------------------~~---~~~l~~aa~~e--------------~~s~HPia~Ai~~~~~~ 334 (562)
T TIGR01511 305 ---------------------------------DR---TELLALAAALE--------------AGSEHPLAKAIVSYAKE 334 (562)
T ss_pred ---------------------------------CH---HHHHHHHHHHh--------------ccCCChHHHHHHHHHHh
Confidence 00 12233222111 12369999999999988
Q ss_pred cCCEEEeecCceeEEEecCCCCCccceeEeeEeEeecCCCCCceEEEEEEeCCCeEEEEEeCCchHHHHHhcccchhhHH
Q 002029 337 LGFEFYERTQTSISVHELDPVTGTKVERSYSLLNVLEFSSSRKRMSVIVRSEEGTLLLLSKGADSVMFERLAENGREFEE 416 (978)
Q Consensus 337 ~g~~~~~r~~~~~~i~~~~~~~~~~~~~~~~il~~~~F~s~rkrmsviv~~~~~~~~l~~KGa~~~i~~~~~~~~~~~~~ 416 (978)
.|.....- ..++ .+ ..+.+...+ +|+ -+..|+++.+.+. +..
T Consensus 335 ~~~~~~~~-------------------~~~~---~~----~g~Gi~~~~---~g~--~~~iG~~~~~~~~----~~~--- 376 (562)
T TIGR01511 335 KGITLVEV-------------------SDFK---AI----PGIGVEGTV---EGT--KIQLGNEKLLGEN----AIK--- 376 (562)
T ss_pred cCCCcCCC-------------------CCeE---EE----CCceEEEEE---CCE--EEEEECHHHHHhC----CCC---
Confidence 76532110 0110 01 122333332 232 2345888775331 111
Q ss_pred HHHHHHHHHHHccceeEeeEEEeCCHHHHHHHHHHHHHHhhcccccHHHHHHHHHHHhhcccEEEEEEeeccccCCChHH
Q 002029 417 QTKEHINEYADAGLRTLILAYRELDEKEYKQFNEEFTEAKNSVSADREELAEEIAEKIEKNLILLGATAVEDKLQNGVPE 496 (978)
Q Consensus 417 ~~~~~l~~~a~~Glr~l~~A~r~l~~~e~~~~~~~~~~a~~~l~~~r~~~~~~~~~~ie~dl~llG~i~ieD~lr~~v~~ 496 (978)
+..+..+|.+++.++ .|.+++|.++++|++||++++
T Consensus 377 -----~~~~~~~g~~~~~~~---------------------------------------~~~~~~g~~~~~d~l~~~a~e 412 (562)
T TIGR01511 377 -----IDGKAEQGSTSVLVA---------------------------------------VNGELAGVFALEDQLRPEAKE 412 (562)
T ss_pred -----CChhhhCCCEEEEEE---------------------------------------ECCEEEEEEEecccccHHHHH
Confidence 112357899998887 577899999999999999999
Q ss_pred HHHHHHHcCCeEEEEcCCChhhHHHHHHHcCccccCceEEEEecCCCcccccchhhhHHHHHHHHHHHHHHHHHhhhhhh
Q 002029 497 CIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQGMRQVIISSETPESKTLEKSEDKSAAAAALKASVLHQLIRGKELL 576 (978)
Q Consensus 497 ~I~~L~~aGIkv~mlTGD~~~tA~~ia~~~gl~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 576 (978)
+|+.|++.|++++|+|||+..+|..+++++|+-
T Consensus 413 ~i~~Lk~~Gi~v~ilSgd~~~~a~~ia~~lgi~----------------------------------------------- 445 (562)
T TIGR01511 413 VIQALKRRGIEPVMLTGDNRKTAKAVAKELGIN----------------------------------------------- 445 (562)
T ss_pred HHHHHHHcCCeEEEEcCCCHHHHHHHHHHcCCc-----------------------------------------------
Confidence 999999999999999999999999999999971
Q ss_pred ccccCCCCCeEEEEcCchhhhhchhhHHHHHHHHHhccCeeEEEeCCchhHHHHHHHHHccCCCeEEEEcCCcCCHHHhh
Q 002029 577 DSSNESLGPLALIIDGKSLTYALEDDVKDLFLELAIGCASVICCRSSPKQKALVTRLVKTKTSSTTLAIGDGANDVGMLQ 656 (978)
Q Consensus 577 ~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~f~~l~~~~~~vi~~r~sP~qK~~iV~~lk~~~~~~v~aiGDG~ND~~ml~ 656 (978)
+++++.|++|..+++.+++ .++.|+|+|||.||++|++
T Consensus 446 -----------------------------------------~~~~~~p~~K~~~v~~l~~-~~~~v~~VGDg~nD~~al~ 483 (562)
T TIGR01511 446 -----------------------------------------VRAEVLPDDKAALIKELQE-KGRVVAMVGDGINDAPALA 483 (562)
T ss_pred -----------------------------------------EEccCChHHHHHHHHHHHH-cCCEEEEEeCCCccHHHHh
Confidence 4567789999999999998 7889999999999999999
Q ss_pred hccccccccCCccchhccccceehh--chhhhHHHHHHhhhhhhhHhhHhHHHHHHHHHHHHHHHH
Q 002029 657 EADIGVGISGVEGMQAVMSSDIAIA--QFRFLERLLLVHGHWCYRRISSMICYFFYKNIAFGFTLF 720 (978)
Q Consensus 657 ~AdvGI~i~g~e~~~a~~asD~vi~--~f~~l~~lll~~gR~~~~~i~~~i~~~~~~n~~~~~~~~ 720 (978)
+|||||++... ...++.+||+++. +.+.+..+ +..||..++++++++.|.+..|++.+.+.+
T Consensus 484 ~A~vgia~g~g-~~~a~~~Advvl~~~~l~~l~~~-i~lsr~~~~~i~qn~~~a~~~n~~~i~la~ 547 (562)
T TIGR01511 484 QADVGIAIGAG-TDVAIEAADVVLMRNDLNDVATA-IDLSRKTLRRIKQNLLWAFGYNVIAIPIAA 547 (562)
T ss_pred hCCEEEEeCCc-CHHHHhhCCEEEeCCCHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999988532 2337889999997 46668888 899999999999999999999998765554
No 32
>PRK10671 copA copper exporting ATPase; Provisional
Probab=100.00 E-value=5.4e-43 Score=434.68 Aligned_cols=418 Identities=18% Similarity=0.210 Sum_probs=323.9
Q ss_pred EEEEEEC-----CccccC--CcCceeecCceeccCCeEEEEEEEeCccchh---ccccCCCCCCcCHHHHHHHHHHHHHH
Q 002029 27 VGSLELE-----EQQYPL--TPQQLLLRDSKLRNTDCIYGAVIFTGRDTKV---FQNSTGPPSKRSKVERRMDKIIYFLF 96 (978)
Q Consensus 27 ~G~~~~~-----~~~~pl--~~~n~l~~Gs~l~~tg~~~gvVv~tG~~Tki---~~~~~~~~~k~s~l~~~~n~~~~~~~ 96 (978)
+|...+| ||+.|+ .+++.+++||.+.+ |.+.+.|+.+|.+|.+ ....++++..++++++.++++..++.
T Consensus 363 ~g~~~vdeS~lTGEs~pv~k~~gd~V~aGt~~~~-G~~~~~v~~~g~~t~l~~i~~lv~~a~~~k~~~~~~~d~~a~~~v 441 (834)
T PRK10671 363 QGEAWLDEAMLTGEPIPQQKGEGDSVHAGTVVQD-GSVLFRASAVGSHTTLSRIIRMVRQAQSSKPEIGQLADKISAVFV 441 (834)
T ss_pred EceEEEeehhhcCCCCCEecCCCCEEEecceecc-eeEEEEEEEEcCcChHHHHHHHHHHHhccCCcHHHHHHHHHHHHH
Confidence 4555554 899887 77899999999997 9999999999999955 34445566678999999999999999
Q ss_pred HHHHHHHHHHHHHHHhhhccccccccccccccCCCCCCCcCCchhhHHHHHHHHHHHHHHHhccccchhhhhHHHHHHHH
Q 002029 97 GILVLMSFIGSIFFGIATREDLQDGKMKRWYLRPDDTTAYYDPKRAAVAAVLHFLTALMLYGYLIPISLYVSIEIVKILQ 176 (978)
Q Consensus 97 ~~~~~~~~i~~i~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~iP~sL~v~i~~~~~~~ 176 (978)
++.++++++.+++|.+. +.. ..+...+..++++++.+|||+|+++++++.+.+
T Consensus 442 ~~v~~~a~~~~~~~~~~-~~~--------------------------~~~~~~~~~a~~vlv~acPcaL~la~p~a~~~~ 494 (834)
T PRK10671 442 PVVVVIALVSAAIWYFF-GPA--------------------------PQIVYTLVIATTVLIIACPCALGLATPMSIISG 494 (834)
T ss_pred HHHHHHHHHHHHHHHHh-CCc--------------------------hHHHHHHHHHHHHHHHhcccchhhhHHHHHHHH
Confidence 88888888776665432 110 011336778999999999999999999999888
Q ss_pred HHHHhhccccccccCCCcccccCcccccccccceEEEeeCCcccccCeeEEEEEEECCeeeCCCchHHHHHHHhhcCCCC
Q 002029 177 SIFINQDLHMYYEETDKPARARTSNLNEELGQVDTILSDKTGTLTCNSMEFIKCSIAGTSYGRGVTEVERAMARRKGSPL 256 (978)
Q Consensus 177 ~~~i~~d~~m~~~~~~~~~~~r~~~~~e~Lg~v~~I~sDKTGTLT~n~m~~~~~~i~~~~y~~~~~~~~~~~~~~~~~~~ 256 (978)
.. ++ +++|+++|+.+.+|.||+++++|||||||||+|+|++.++...+.. .
T Consensus 495 ~~------~~----a~~gilvk~~~~le~l~~v~~v~fDKTGTLT~g~~~v~~~~~~~~~-----~-------------- 545 (834)
T PRK10671 495 VG------RA----AEFGVLVRDADALQRASTLDTLVFDKTGTLTEGKPQVVAVKTFNGV-----D-------------- 545 (834)
T ss_pred HH------HH----HHCCeEEecHHHHHhhcCCCEEEEcCCCccccCceEEEEEEccCCC-----C--------------
Confidence 87 45 8899999999999999999999999999999999999887532210 0
Q ss_pred ccchhhhhhcccccCCcccCchhhhcCCCCCCCChHHHHHHHH-HHhhhcceeccccCCCCcEEEecCCccHHHHHHHHH
Q 002029 257 EEEVTEEQEDKASIKGFNFEDERIMNGSWVNEPHADVIQKFLR-LLAICHTALPEVDEENGKISYEAESPDEAAFVIAAR 335 (978)
Q Consensus 257 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~-~lalC~~~~~~~~~~~~~~~y~~~sp~E~Alv~~a~ 335 (978)
. ++++. +.+++. .+.||.+.|+++++.
T Consensus 546 ----------------------------------~---~~~l~~a~~~e~---------------~s~hp~a~Ai~~~~~ 573 (834)
T PRK10671 546 ----------------------------------E---AQALRLAAALEQ---------------GSSHPLARAILDKAG 573 (834)
T ss_pred ----------------------------------H---HHHHHHHHHHhC---------------CCCCHHHHHHHHHHh
Confidence 0 11222 223321 136999999999886
Q ss_pred HcCCEEEeecCceeEEEecCCCCCccceeEeeEeEeecCCCCCceEEEEEEeCCCeEEEEEeCCchHHHHHhcccchhhH
Q 002029 336 ELGFEFYERTQTSISVHELDPVTGTKVERSYSLLNVLEFSSSRKRMSVIVRSEEGTLLLLSKGADSVMFERLAENGREFE 415 (978)
Q Consensus 336 ~~g~~~~~r~~~~~~i~~~~~~~~~~~~~~~~il~~~~F~s~rkrmsviv~~~~~~~~l~~KGa~~~i~~~~~~~~~~~~ 415 (978)
..+... + ..++... .+.+... . +|.. +.+|+++.+.+.. ...
T Consensus 574 ~~~~~~---------~------------~~~~~~~-------g~Gv~~~--~-~g~~--~~~G~~~~~~~~~-----~~~ 615 (834)
T PRK10671 574 DMTLPQ---------V------------NGFRTLR-------GLGVSGE--A-EGHA--LLLGNQALLNEQQ-----VDT 615 (834)
T ss_pred hCCCCC---------c------------ccceEec-------ceEEEEE--E-CCEE--EEEeCHHHHHHcC-----CCh
Confidence 432100 0 1111000 1112222 1 3433 3459988764311 112
Q ss_pred HHHHHHHHHHHHccceeEeeEEEeCCHHHHHHHHHHHHHHhhcccccHHHHHHHHHHHhhcccEEEEEEeeccccCCChH
Q 002029 416 EQTKEHINEYADAGLRTLILAYRELDEKEYKQFNEEFTEAKNSVSADREELAEEIAEKIEKNLILLGATAVEDKLQNGVP 495 (978)
Q Consensus 416 ~~~~~~l~~~a~~Glr~l~~A~r~l~~~e~~~~~~~~~~a~~~l~~~r~~~~~~~~~~ie~dl~llG~i~ieD~lr~~v~ 495 (978)
+.+...++.++.+|.+++++|+ |..++|+++++|++||+++
T Consensus 616 ~~~~~~~~~~~~~g~~~v~va~---------------------------------------~~~~~g~~~l~d~~r~~a~ 656 (834)
T PRK10671 616 KALEAEITAQASQGATPVLLAV---------------------------------------DGKAAALLAIRDPLRSDSV 656 (834)
T ss_pred HHHHHHHHHHHhCCCeEEEEEE---------------------------------------CCEEEEEEEccCcchhhHH
Confidence 4456667788999999999993 4569999999999999999
Q ss_pred HHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCccccCceEEEEecCCCcccccchhhhHHHHHHHHHHHHHHHHHhhhhh
Q 002029 496 ECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQGMRQVIISSETPESKTLEKSEDKSAAAAALKASVLHQLIRGKEL 575 (978)
Q Consensus 496 ~~I~~L~~aGIkv~mlTGD~~~tA~~ia~~~gl~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 575 (978)
++|+.|++.|++++|+|||+..+|..+++++|+..
T Consensus 657 ~~i~~L~~~gi~v~~~Tgd~~~~a~~ia~~lgi~~--------------------------------------------- 691 (834)
T PRK10671 657 AALQRLHKAGYRLVMLTGDNPTTANAIAKEAGIDE--------------------------------------------- 691 (834)
T ss_pred HHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCCCE---------------------------------------------
Confidence 99999999999999999999999999999999821
Q ss_pred hccccCCCCCeEEEEcCchhhhhchhhHHHHHHHHHhccCeeEEEeCCchhHHHHHHHHHccCCCeEEEEcCCcCCHHHh
Q 002029 576 LDSSNESLGPLALIIDGKSLTYALEDDVKDLFLELAIGCASVICCRSSPKQKALVTRLVKTKTSSTTLAIGDGANDVGML 655 (978)
Q Consensus 576 ~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~f~~l~~~~~~vi~~r~sP~qK~~iV~~lk~~~~~~v~aiGDG~ND~~ml 655 (978)
+++++.|++|.++++.++. .++.|+|+|||.||++|+
T Consensus 692 ------------------------------------------~~~~~~p~~K~~~i~~l~~-~~~~v~~vGDg~nD~~al 728 (834)
T PRK10671 692 ------------------------------------------VIAGVLPDGKAEAIKRLQS-QGRQVAMVGDGINDAPAL 728 (834)
T ss_pred ------------------------------------------EEeCCCHHHHHHHHHHHhh-cCCEEEEEeCCHHHHHHH
Confidence 7788899999999999997 788999999999999999
Q ss_pred hhccccccccCCccchhccccceehhc--hhhhHHHHHHhhhhhhhHhhHhHHHHHHHHHHHHHHHH
Q 002029 656 QEADIGVGISGVEGMQAVMSSDIAIAQ--FRFLERLLLVHGHWCYRRISSMICYFFYKNIAFGFTLF 720 (978)
Q Consensus 656 ~~AdvGI~i~g~e~~~a~~asD~vi~~--f~~l~~lll~~gR~~~~~i~~~i~~~~~~n~~~~~~~~ 720 (978)
++||+||++.+ ....++++||+++.+ +..+..+ +..||..++++++++.|.+.+|++.+.+.+
T Consensus 729 ~~Agvgia~g~-g~~~a~~~ad~vl~~~~~~~i~~~-i~l~r~~~~~i~~Nl~~a~~yn~~~i~~a~ 793 (834)
T PRK10671 729 AQADVGIAMGG-GSDVAIETAAITLMRHSLMGVADA-LAISRATLRNMKQNLLGAFIYNSLGIPIAA 793 (834)
T ss_pred HhCCeeEEecC-CCHHHHHhCCEEEecCCHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999954 333488999999986 5557777 899999999999999999999988765543
No 33
>COG2216 KdpB High-affinity K+ transport system, ATPase chain B [Inorganic ion transport and metabolism]
Probab=100.00 E-value=5.6e-37 Score=329.18 Aligned_cols=422 Identities=20% Similarity=0.242 Sum_probs=310.0
Q ss_pred eEEEEEEC-----CccccC--CcC---ceeecCceeccCCeEEEEEEEeCccc---hhccccCCCCCCcCHHHHHHHHHH
Q 002029 26 FVGSLELE-----EQQYPL--TPQ---QLLLRDSKLRNTDCIYGAVIFTGRDT---KVFQNSTGPPSKRSKVERRMDKII 92 (978)
Q Consensus 26 f~G~~~~~-----~~~~pl--~~~---n~l~~Gs~l~~tg~~~gvVv~tG~~T---ki~~~~~~~~~k~s~l~~~~n~~~ 92 (978)
-+|...+| ||+-|+ +.+ .-+-.||.+.+ +|+...++..-.+| |+....+.+.+++||-|-.++.+.
T Consensus 144 IeG~asVdESAITGESaPViresGgD~ssVtGgT~v~S-D~l~irita~pG~sFlDrMI~LVEgA~R~KTPNEIAL~iLL 222 (681)
T COG2216 144 IEGVASVDESAITGESAPVIRESGGDFSSVTGGTRVLS-DWLKIRITANPGETFLDRMIALVEGAERQKTPNEIALTILL 222 (681)
T ss_pred EeeeeecchhhccCCCcceeeccCCCcccccCCcEEee-eeEEEEEEcCCCccHHHHHHHHhhchhccCChhHHHHHHHH
Confidence 36766665 888887 333 56899999996 99999999998888 555667788888999888887766
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhccccccccccccccCCCCCCCcCCchhhHHHHHHHHHHHHHHHhccccchhhhhHHHH
Q 002029 93 YFLFGILVLMSFIGSIFFGIATREDLQDGKMKRWYLRPDDTTAYYDPKRAAVAAVLHFLTALMLYGYLIPISLYVSIEIV 172 (978)
Q Consensus 93 ~~~~~~~~~~~~i~~i~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~iP~sL~v~i~~~ 172 (978)
..+.++.++ ++....-+..|.+.. -......+.|++++||..+.--++.
T Consensus 223 ~~LTliFL~-~~~Tl~p~a~y~~g~-----------------------------~~~i~~LiALlV~LIPTTIGgLLsA- 271 (681)
T COG2216 223 SGLTLIFLL-AVATLYPFAIYSGGG-----------------------------AASVTVLVALLVCLIPTTIGGLLSA- 271 (681)
T ss_pred HHHHHHHHH-HHHhhhhHHHHcCCC-----------------------------CcCHHHHHHHHHHHhcccHHHHHHH-
Confidence 555432222 221111111222100 0135566788999999987664333
Q ss_pred HHHHHHHHhhccccccccCCCcccccCcccccccccceEEEeeCCcccccCeeEEEEEEECCeeeCCCchHHHHHHHhhc
Q 002029 173 KILQSIFINQDLHMYYEETDKPARARTSNLNEELGQVDTILSDKTGTLTCNSMEFIKCSIAGTSYGRGVTEVERAMARRK 252 (978)
Q Consensus 173 ~~~~~~~i~~d~~m~~~~~~~~~~~r~~~~~e~Lg~v~~I~sDKTGTLT~n~m~~~~~~i~~~~y~~~~~~~~~~~~~~~ 252 (978)
..|.-..|+ .+-++++++..++|..|.||++..|||||+|-|+-.-.++...+.
T Consensus 272 -----IGIAGMdRv----~~~NViA~SGRAVEaaGDvdtliLDKTGTIT~GnR~A~~f~p~~g----------------- 325 (681)
T COG2216 272 -----IGIAGMDRV----TQFNVIATSGRAVEAAGDVDTLLLDKTGTITLGNRQASEFIPVPG----------------- 325 (681)
T ss_pred -----hhhhhhhHh----hhhceeecCcchhhhcCCccEEEecccCceeecchhhhheecCCC-----------------
Confidence 333222366 888999999999999999999999999999987755444332111
Q ss_pred CCCCccchhhhhhcccccCCcccCchhhhcCCCCCCCChHHHHHHHHHHhhhcceeccccCCCCcEEEecCCccHHHHHH
Q 002029 253 GSPLEEEVTEEQEDKASIKGFNFEDERIMNGSWVNEPHADVIQKFLRLLAICHTALPEVDEENGKISYEAESPDEAAFVI 332 (978)
Q Consensus 253 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~lalC~~~~~~~~~~~~~~~y~~~sp~E~Alv~ 332 (978)
-..+++..+..+++-. .+.|.-..+|+
T Consensus 326 ---------------------------------------v~~~~la~aa~lsSl~--------------DeTpEGrSIV~ 352 (681)
T COG2216 326 ---------------------------------------VSEEELADAAQLASLA--------------DETPEGRSIVE 352 (681)
T ss_pred ---------------------------------------CCHHHHHHHHHHhhhc--------------cCCCCcccHHH
Confidence 0123445555444322 24788889999
Q ss_pred HHHHcCCEEEeecCceeEEEecCCCCCccceeEeeEeEeecCCCCCceEEEEEEeCCCeEEEEEeCCchHHHHHhcccch
Q 002029 333 AARELGFEFYERTQTSISVHELDPVTGTKVERSYSLLNVLEFSSSRKRMSVIVRSEEGTLLLLSKGADSVMFERLAENGR 412 (978)
Q Consensus 333 ~a~~~g~~~~~r~~~~~~i~~~~~~~~~~~~~~~~il~~~~F~s~rkrmsviv~~~~~~~~l~~KGa~~~i~~~~~~~~~ 412 (978)
.|++.|+....+.. . ..-..+||+.+.|+.++-.. ++ .-+-|||.+.|.......+.
T Consensus 353 LA~~~~~~~~~~~~-----------------~--~~~~fvpFtA~TRmSGvd~~--~~--~~irKGA~dai~~~v~~~~g 409 (681)
T COG2216 353 LAKKLGIELREDDL-----------------Q--SHAEFVPFTAQTRMSGVDLP--GG--REIRKGAVDAIRRYVRERGG 409 (681)
T ss_pred HHHHhccCCCcccc-----------------c--ccceeeecceecccccccCC--CC--ceeecccHHHHHHHHHhcCC
Confidence 99999865533210 0 02345899988766666543 33 56779999999999887666
Q ss_pred hhHHHHHHHHHHHHHccceeEeeEEEeCCHHHHHHHHHHHHHHhhcccccHHHHHHHHHHHhhcccEEEEEEeeccccCC
Q 002029 413 EFEEQTKEHINEYADAGLRTLILAYRELDEKEYKQFNEEFTEAKNSVSADREELAEEIAEKIEKNLILLGATAVEDKLQN 492 (978)
Q Consensus 413 ~~~~~~~~~l~~~a~~Glr~l~~A~r~l~~~e~~~~~~~~~~a~~~l~~~r~~~~~~~~~~ie~dl~llG~i~ieD~lr~ 492 (978)
...+++....++-++.|=..|+++ .|-.++|++.++|-+++
T Consensus 410 ~~p~~l~~~~~~vs~~GGTPL~V~---------------------------------------~~~~~~GVI~LkDivK~ 450 (681)
T COG2216 410 HIPEDLDAAVDEVSRLGGTPLVVV---------------------------------------ENGRILGVIYLKDIVKP 450 (681)
T ss_pred CCCHHHHHHHHHHHhcCCCceEEE---------------------------------------ECCEEEEEEEehhhcch
Confidence 688899999999999999999999 57789999999999999
Q ss_pred ChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCccccCceEEEEecCCCcccccchhhhHHHHHHHHHHHHHHHHHhh
Q 002029 493 GVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQGMRQVIISSETPESKTLEKSEDKSAAAAALKASVLHQLIRG 572 (978)
Q Consensus 493 ~v~~~I~~L~~aGIkv~mlTGD~~~tA~~ia~~~gl~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 572 (978)
|.+|-+++||+.|||.+|+|||++.||..||.+.|+..
T Consensus 451 Gi~ERf~elR~MgIkTvM~TGDN~~TAa~IA~EAGVDd------------------------------------------ 488 (681)
T COG2216 451 GIKERFAELRKMGIKTVMITGDNPLTAAAIAAEAGVDD------------------------------------------ 488 (681)
T ss_pred hHHHHHHHHHhcCCeEEEEeCCCHHHHHHHHHHhCchh------------------------------------------
Confidence 99999999999999999999999999999999999721
Q ss_pred hhhhccccCCCCCeEEEEcCchhhhhchhhHHHHHHHHHhccCeeEEEeCCchhHHHHHHHHHccCCCeEEEEcCCcCCH
Q 002029 573 KELLDSSNESLGPLALIIDGKSLTYALEDDVKDLFLELAIGCASVICCRSSPKQKALVTRLVKTKTSSTTLAIGDGANDV 652 (978)
Q Consensus 573 ~~~~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~f~~l~~~~~~vi~~r~sP~qK~~iV~~lk~~~~~~v~aiGDG~ND~ 652 (978)
..++++|++|..+|+.-|. .|+.|+|+|||.||+
T Consensus 489 ---------------------------------------------fiAeatPEdK~~~I~~eQ~-~grlVAMtGDGTNDA 522 (681)
T COG2216 489 ---------------------------------------------FIAEATPEDKLALIRQEQA-EGRLVAMTGDGTNDA 522 (681)
T ss_pred ---------------------------------------------hhhcCChHHHHHHHHHHHh-cCcEEEEcCCCCCcc
Confidence 5688999999999999998 899999999999999
Q ss_pred HHhhhccccccccCCccchhccccceehhchhh--hHHHHHHhhhhhhhHhhHhHHHHHH
Q 002029 653 GMLQEADIGVGISGVEGMQAVMSSDIAIAQFRF--LERLLLVHGHWCYRRISSMICYFFY 710 (978)
Q Consensus 653 ~ml~~AdvGI~i~g~e~~~a~~asD~vi~~f~~--l~~lll~~gR~~~~~i~~~i~~~~~ 710 (978)
|+|.+||||++|...... |+++++++=.|-+. |... +.-|++..-.=..+..|++.
T Consensus 523 PALAqAdVg~AMNsGTqA-AkEAaNMVDLDS~PTKliev-V~IGKqlLiTRGaLTTFSIA 580 (681)
T COG2216 523 PALAQADVGVAMNSGTQA-AKEAANMVDLDSNPTKLIEV-VEIGKQLLITRGALTTFSIA 580 (681)
T ss_pred hhhhhcchhhhhccccHH-HHHhhcccccCCCccceehH-hhhhhhheeecccceeeehh
Confidence 999999999999433322 89999999777443 4444 56676655333333334433
No 34
>PF00702 Hydrolase: haloacid dehalogenase-like hydrolase; InterPro: IPR005834 This group of hydrolase enzymes is structurally different from the alpha/beta hydrolase family (abhydrolase). This group includes L-2-haloacid dehalogenase, epoxide hydrolases and phosphatases. The structure consists of two domains. One is an inserted four helix bundle, which is the least well conserved region of the alignment, between residues 16 and 96 of HAD1_PSESP. The rest of the fold is composed of the core alpha/beta domain.; GO: 0003824 catalytic activity, 0008152 metabolic process; PDB: 1TE2_A 3NAL_A 3NAM_A 3NAN_A 3A1D_B 3J09_A 3J08_A 2B8E_C 3A1E_A 2VOY_J ....
Probab=99.87 E-value=5.1e-22 Score=208.71 Aligned_cols=97 Identities=33% Similarity=0.532 Sum_probs=90.3
Q ss_pred ccEEEEEEeeccccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCccccCceEEEEecCCCcccccchhhhHHH
Q 002029 477 NLILLGATAVEDKLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQGMRQVIISSETPESKTLEKSEDKSA 556 (978)
Q Consensus 477 dl~llG~i~ieD~lr~~v~~~I~~L~~aGIkv~mlTGD~~~tA~~ia~~~gl~~~~~~~i~i~~~~~~~~~~~~~~~~~~ 556 (978)
++.++|.+.+.|++|++++++|+.|+++|++++|+|||+..+|..+|+++||.
T Consensus 115 ~~~~~~~~~~~d~~~~~~~~~l~~L~~~Gi~~~i~TGD~~~~a~~~~~~lgi~--------------------------- 167 (215)
T PF00702_consen 115 NLIFLGLFGLRDPLRPGAKEALQELKEAGIKVAILTGDNESTASAIAKQLGIF--------------------------- 167 (215)
T ss_dssp SHEEEEEEEEEEEBHTTHHHHHHHHHHTTEEEEEEESSEHHHHHHHHHHTTSC---------------------------
T ss_pred cCeEEEEEeecCcchhhhhhhhhhhhccCcceeeeeccccccccccccccccc---------------------------
Confidence 77899999999999999999999999999999999999999999999999982
Q ss_pred HHHHHHHHHHHHHHhhhhhhccccCCCCCeEEEEcCchhhhhchhhHHHHHHHHHhccCeeEEEeC--CchhH--HHHHH
Q 002029 557 AAAALKASVLHQLIRGKELLDSSNESLGPLALIIDGKSLTYALEDDVKDLFLELAIGCASVICCRS--SPKQK--ALVTR 632 (978)
Q Consensus 557 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~f~~l~~~~~~vi~~r~--sP~qK--~~iV~ 632 (978)
+..+++++ +|++| .++++
T Consensus 168 ----------------------------------------------------------~~~v~a~~~~kP~~k~~~~~i~ 189 (215)
T PF00702_consen 168 ----------------------------------------------------------DSIVFARVIGKPEPKIFLRIIK 189 (215)
T ss_dssp ----------------------------------------------------------SEEEEESHETTTHHHHHHHHHH
T ss_pred ----------------------------------------------------------cccccccccccccchhHHHHHH
Confidence 23489999 99999 99999
Q ss_pred HHHccCCCeEEEEcCCcCCHHHhhhcc
Q 002029 633 LVKTKTSSTTLAIGDGANDVGMLQEAD 659 (978)
Q Consensus 633 ~lk~~~~~~v~aiGDG~ND~~ml~~Ad 659 (978)
.++. .+..|+|+|||.||++|+++||
T Consensus 190 ~l~~-~~~~v~~vGDg~nD~~al~~Ag 215 (215)
T PF00702_consen 190 ELQV-KPGEVAMVGDGVNDAPALKAAG 215 (215)
T ss_dssp HHTC-TGGGEEEEESSGGHHHHHHHSS
T ss_pred HHhc-CCCEEEEEccCHHHHHHHHhCc
Confidence 9986 4569999999999999999997
No 35
>PF13246 Hydrolase_like2: Putative hydrolase of sodium-potassium ATPase alpha subunit
Probab=99.55 E-value=5.1e-15 Score=131.18 Aligned_cols=90 Identities=33% Similarity=0.554 Sum_probs=71.3
Q ss_pred hhhcceeccccCCCCcEEEecCCccHHHHHHHHHHcCCEEEeecCceeEEEecCCCCCccceeEeeEeEeecCCCCCceE
Q 002029 302 AICHTALPEVDEENGKISYEAESPDEAAFVIAARELGFEFYERTQTSISVHELDPVTGTKVERSYSLLNVLEFSSSRKRM 381 (978)
Q Consensus 302 alC~~~~~~~~~~~~~~~y~~~sp~E~Alv~~a~~~g~~~~~r~~~~~~i~~~~~~~~~~~~~~~~il~~~~F~s~rkrm 381 (978)
+|||++....+++.+..+ ..|+|+|.||++++.+.|..+.. ...+..|++++++||||+||||
T Consensus 1 ~LCn~a~~~~~~~~~~~~-~~G~ptE~ALl~~~~~~g~~~~~----------------~~~~~~~~~~~~~pF~S~rK~m 63 (91)
T PF13246_consen 1 ALCNDAEIEYDDESKTEE-IIGDPTEKALLRFAKKLGVGIDI----------------KEIRSKYKIVAEIPFDSERKRM 63 (91)
T ss_pred CCccccEeecCCCCcccc-ccCCcCHHHHHHHHHHcCCCCcH----------------HHHHhhcceeEEEccCccccee
Confidence 589999886555433322 45799999999999999754321 1134789999999999999999
Q ss_pred EEEEEeCCCeEEEEEeCCchHHHHHhcc
Q 002029 382 SVIVRSEEGTLLLLSKGADSVMFERLAE 409 (978)
Q Consensus 382 sviv~~~~~~~~l~~KGa~~~i~~~~~~ 409 (978)
+|+++ .++.+++|+|||||.|+++|+.
T Consensus 64 svv~~-~~~~~~~~~KGA~e~il~~Ct~ 90 (91)
T PF13246_consen 64 SVVVR-NDGKYILYVKGAPEVILDRCTH 90 (91)
T ss_pred EEEEe-CCCEEEEEcCCChHHHHHhcCC
Confidence 99999 3446788999999999999974
No 36
>COG4087 Soluble P-type ATPase [General function prediction only]
Probab=99.52 E-value=5.5e-14 Score=125.79 Aligned_cols=126 Identities=24% Similarity=0.398 Sum_probs=109.3
Q ss_pred cEEEEEEeeccccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCccccCceEEEEecCCCcccccchhhhHHHH
Q 002029 478 LILLGATAVEDKLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQGMRQVIISSETPESKTLEKSEDKSAA 557 (978)
Q Consensus 478 l~llG~i~ieD~lr~~v~~~I~~L~~aGIkv~mlTGD~~~tA~~ia~~~gl~~~~~~~i~i~~~~~~~~~~~~~~~~~~~ 557 (978)
..+.+.++---++-++|+++|++|++. ++|++.|||..-+....|.-.|+-..
T Consensus 19 ~~v~~tiatgGklf~ev~e~iqeL~d~-V~i~IASgDr~gsl~~lae~~gi~~~-------------------------- 71 (152)
T COG4087 19 GKVLYTIATGGKLFSEVSETIQELHDM-VDIYIASGDRKGSLVQLAEFVGIPVE-------------------------- 71 (152)
T ss_pred ceEEEEEccCcEEcHhhHHHHHHHHHh-heEEEecCCcchHHHHHHHHcCCcee--------------------------
Confidence 567888888999999999999999999 99999999999999999998886321
Q ss_pred HHHHHHHHHHHHHhhhhhhccccCCCCCeEEEEcCchhhhhchhhHHHHHHHHHhccCeeEEEeCCchhHHHHHHHHHcc
Q 002029 558 AAALKASVLHQLIRGKELLDSSNESLGPLALIIDGKSLTYALEDDVKDLFLELAIGCASVICCRSSPKQKALVTRLVKTK 637 (978)
Q Consensus 558 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~f~~l~~~~~~vi~~r~sP~qK~~iV~~lk~~ 637 (978)
.+++...|+.|+.+++.|++
T Consensus 72 -----------------------------------------------------------rv~a~a~~e~K~~ii~eLkk- 91 (152)
T COG4087 72 -----------------------------------------------------------RVFAGADPEMKAKIIRELKK- 91 (152)
T ss_pred -----------------------------------------------------------eeecccCHHHHHHHHHHhcC-
Confidence 18888999999999999998
Q ss_pred CCCeEEEEcCCcCCHHHhhhccccccccCCccch--hccccceehhchhhhHHHH
Q 002029 638 TSSTTLAIGDGANDVGMLQEADIGVGISGVEGMQ--AVMSSDIAIAQFRFLERLL 690 (978)
Q Consensus 638 ~~~~v~aiGDG~ND~~ml~~AdvGI~i~g~e~~~--a~~asD~vi~~f~~l~~ll 690 (978)
+++.|.|+|||+||.+||++||+||..-++++.. +..+||+++.+-+.+..++
T Consensus 92 ~~~k~vmVGnGaND~laLr~ADlGI~tiq~e~v~~r~l~~ADvvik~i~e~ldl~ 146 (152)
T COG4087 92 RYEKVVMVGNGANDILALREADLGICTIQQEGVPERLLLTADVVLKEIAEILDLL 146 (152)
T ss_pred CCcEEEEecCCcchHHHhhhcccceEEeccCCcchHHHhhchhhhhhHHHHHHHh
Confidence 8999999999999999999999999654555532 4479999999977766664
No 37
>PF00122 E1-E2_ATPase: E1-E2 ATPase p-type cation-transporting ATPase superfamily signature H+-transporting ATPase (proton pump) signature sodium/potassium-transporting ATPase signature; InterPro: IPR008250 ATPases (or ATP synthases) are membrane-bound enzyme complexes/ion transporters that combine ATP synthesis and/or hydrolysis with the transport of protons across a membrane. ATPases can harness the energy from a proton gradient, using the flux of ions across the membrane via the ATPase proton channel to drive the synthesis of ATP. Some ATPases work in reverse, using the energy from the hydrolysis of ATP to create a proton gradient. There are different types of ATPases, which can differ in function (ATP synthesis and/or hydrolysis), structure (e.g., F-, V- and A-ATPases, which contain rotary motors) and in the type of ions they transport [, ]. The different types include: F-ATPases (F1F0-ATPases), which are found in mitochondria, chloroplasts and bacterial plasma membranes where they are the prime producers of ATP, using the proton gradient generated by oxidative phosphorylation (mitochondria) or photosynthesis (chloroplasts). V-ATPases (V1V0-ATPases), which are primarily found in eukaryotic vacuoles and catalyse ATP hydrolysis to transport solutes and lower pH in organelles. A-ATPases (A1A0-ATPases), which are found in Archaea and function like F-ATPases (though with respect to their structure and some inhibitor responses, A-ATPases are more closely related to the V-ATPases). P-ATPases (E1E2-ATPases), which are found in bacteria and in eukaryotic plasma membranes and organelles, and function to transport a variety of different ions across membranes. E-ATPases, which are cell-surface enzymes that hydrolyse a range of NTPs, including extracellular ATP. P-ATPases (sometime known as E1-E2 ATPases) (3.6.3.- from EC) are found in bacteria and in a number of eukaryotic plasma membranes and organelles []. P-ATPases function to transport a variety of different compounds, including ions and phospholipids, across a membrane using ATP hydrolysis for energy. There are many different classes of P-ATPases, each of which transports a specific type of ion: H+, Na+, K+, Mg2+, Ca2+, Ag+ and Ag2+, Zn2+, Co2+, Pb2+, Ni2+, Cd2+, Cu+ and Cu2+. P-ATPases can be composed of one or two polypeptides, and can usually assume two main conformations called E1 and E2. This entry represents the actuator (A) domain, and some transmembrane helices found in P-type ATPases []. It contains the TGES-loop which is essential for the metal ion binding which results in tight association between the A and P (phosphorylation) domains []. It does not contain the phosphorylation site. It is thought that the large movement of the actuator domain, which is transmitted to the transmembrane helices, is essential to the long distance coupling between formation/decomposition of the acyl phosphate in the cytoplasmic P-domain and the changes in the ion-binding sites buried deep in the membranous region []. This domain has a modulatory effect on the phosphoenzyme processing steps through its nucleotide binding [],[]. P-type (or E1-E2-type) ATPases that form an aspartyl phosphate intermediate in the course of ATP hydrolysis, can be divided into 4 major groups []: (1) Ca2+-transporting ATPases; (2) Na+/K+- and gastric H+/K+-transporting ATPases; (3) plasma membrane H+-transporting ATPases (proton pumps) of plants, fungi and lower eukaryotes; and (4) all bacterial P-type ATPases, except the g2+-ATPase of Salmonella typhimurium, which is more similar to the eukaryotic sequences. However, great variety of sequence analysis methods results in diversity of classification. More information about this protein can be found at Protein of the Month: ATP Synthases [].; GO: 0000166 nucleotide binding, 0046872 metal ion binding; PDB: 2XZB_A 1MHS_B 3TLM_A 3A3Y_A 2ZXE_A 3NAL_A 3NAM_A 3NAN_A 2YJ6_B 2IYE_A ....
Probab=99.33 E-value=3.9e-12 Score=135.15 Aligned_cols=140 Identities=24% Similarity=0.333 Sum_probs=109.0
Q ss_pred EEEEEC-----CccccC--C-----cCceeecCceeccCCeEEEEEEEeCccchhccc---cCCCCCCcCHHHHHHHHHH
Q 002029 28 GSLELE-----EQQYPL--T-----PQQLLLRDSKLRNTDCIYGAVIFTGRDTKVFQN---STGPPSKRSKVERRMDKII 92 (978)
Q Consensus 28 G~~~~~-----~~~~pl--~-----~~n~l~~Gs~l~~tg~~~gvVv~tG~~Tki~~~---~~~~~~k~s~l~~~~n~~~ 92 (978)
|.+.+| ||+.|+ . .+|++++||.+.+ |+++|+|++||.+|++.++ ...++.+++++++.++++.
T Consensus 76 g~~~vd~s~ltGes~pv~k~~~~~~~~~~i~~Gs~v~~-g~~~~~Vi~tG~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~ 154 (230)
T PF00122_consen 76 GSAYVDESALTGESEPVKKTPLPLNPGNIIFAGSIVVS-GWGIGVVIATGSDTKLGRILQLVSKSESKKSPLERKLNKIA 154 (230)
T ss_dssp SEEEEECHHHHSBSSEEEESSSCCCTTTEE-TTEEEEE-EEEEEEEEE-GGGSHHHHHHHHHHTSCSS-THHHHHHHHHH
T ss_pred cccccccccccccccccccccccccccchhhccccccc-cccccccceeeecccccccccccccccccchhhhhhhHHHH
Confidence 666665 777765 5 8999999999995 9999999999999976433 3456667899999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhccccccccccccccCCCCCCCcCCchhhHHHHHHHHHHHHHHHhccccchhhhhHHHH
Q 002029 93 YFLFGILVLMSFIGSIFFGIATREDLQDGKMKRWYLRPDDTTAYYDPKRAAVAAVLHFLTALMLYGYLIPISLYVSIEIV 172 (978)
Q Consensus 93 ~~~~~~~~~~~~i~~i~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~iP~sL~v~i~~~ 172 (978)
.+++++.+++++++++++.++.. . ..|+ ..+..++.+++.++|++|++++++.
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~-~------~~~~--------------------~~~~~~i~~l~~~~P~~l~~~~~~~ 207 (230)
T PF00122_consen 155 KILIIIILAIAILVFIIWFFNDS-G------ISFF--------------------KSFLFAISLLIVLIPCALPLALPLS 207 (230)
T ss_dssp HHHHHHHHHHHHHHHHHCHTGST-T------CHCC--------------------HHHHHHHHHHHHHS-TTHHHHHHHH
T ss_pred HHHHhcccccchhhhccceeccc-c------cccc--------------------cccccccceeeeecccceeehHHHH
Confidence 99998888888877655443211 0 1232 2688889999999999999999999
Q ss_pred HHHHHHHHhhccccccccCCCcccccCcccccc
Q 002029 173 KILQSIFINQDLHMYYEETDKPARARTSNLNEE 205 (978)
Q Consensus 173 ~~~~~~~i~~d~~m~~~~~~~~~~~r~~~~~e~ 205 (978)
...++. +| .++++++|+++++|+
T Consensus 208 ~~~~~~------~~----~~~~i~v~~~~a~E~ 230 (230)
T PF00122_consen 208 LAIAAR------RL----AKNGIIVKNLSALEA 230 (230)
T ss_dssp HHHHHH------HH----HHTTEEESSTTHHHH
T ss_pred HHHHHH------HH----HHCCEEEeCcccccC
Confidence 999988 55 789999999999884
No 38
>PF00689 Cation_ATPase_C: Cation transporting ATPase, C-terminus; InterPro: IPR006068 ATPases (or ATP synthases) are membrane-bound enzyme complexes/ion transporters that combine ATP synthesis and/or hydrolysis with the transport of protons across a membrane. ATPases can harness the energy from a proton gradient, using the flux of ions across the membrane via the ATPase proton channel to drive the synthesis of ATP. Some ATPases work in reverse, using the energy from the hydrolysis of ATP to create a proton gradient. There are different types of ATPases, which can differ in function (ATP synthesis and/or hydrolysis), structure (e.g., F-, V- and A-ATPases, which contain rotary motors) and in the type of ions they transport [, ]. The different types include: F-ATPases (F1F0-ATPases), which are found in mitochondria, chloroplasts and bacterial plasma membranes where they are the prime producers of ATP, using the proton gradient generated by oxidative phosphorylation (mitochondria) or photosynthesis (chloroplasts). V-ATPases (V1V0-ATPases), which are primarily found in eukaryotic vacuoles and catalyse ATP hydrolysis to transport solutes and lower pH in organelles. A-ATPases (A1A0-ATPases), which are found in Archaea and function like F-ATPases (though with respect to their structure and some inhibitor responses, A-ATPases are more closely related to the V-ATPases). P-ATPases (E1E2-ATPases), which are found in bacteria and in eukaryotic plasma membranes and organelles, and function to transport a variety of different ions across membranes. E-ATPases, which are cell-surface enzymes that hydrolyse a range of NTPs, including extracellular ATP. P-ATPases (sometime known as E1-E2 ATPases) (3.6.3.- from EC) are found in bacteria and in a number of eukaryotic plasma membranes and organelles []. P-ATPases function to transport a variety of different compounds, including ions and phospholipids, across a membrane using ATP hydrolysis for energy. There are many different classes of P-ATPases, each of which transports a specific type of ion: H+, Na+, K+, Mg2+, Ca2+, Ag+ and Ag2+, Zn2+, Co2+, Pb2+, Ni2+, Cd2+, Cu+ and Cu2+. P-ATPases can be composed of one or two polypeptides, and can usually assume two main conformations called E1 and E2. This entry represents the conserved C-terminal region found in several classes of cation-transporting P-type ATPases, including those that transport H+ (3.6.3.6 from EC), Na+ (3.6.3.7 from EC), Ca2+ (3.6.3.8 from EC), Na+/K+ (3.6.3.9 from EC), and H+/K+ (3.6.3.10 from EC). In the H+/K+- and Na+/K+-exchange P-ATPases, this domain is found in the catalytic alpha chain. More information about this protein can be found at Protein of the Month: ATP Synthases [].; PDB: 3A3Y_A 2ZXE_A 2XZB_A 3B9B_A 3N5K_A 3FPS_A 3B9R_A 1WPG_C 2AGV_A 2O9J_A ....
Probab=99.31 E-value=1.4e-11 Score=125.78 Aligned_cols=173 Identities=13% Similarity=0.082 Sum_probs=127.0
Q ss_pred cchhhHHHHHHHHHHhhhhHhhhhccccCCChHHhhhCccchhcccccccccHHHHHHHHHHHHHHHHHHHHHHHHhhcc
Q 002029 732 PVYNDWFLSLYNVFFTSLPVIALGVFDQDVSARFCLKFPLLYQEGVQNILFSWTRILGWALNGVANAAIIFFFCIHAMKQ 811 (978)
Q Consensus 732 ~~~~~~~~~~~n~i~~~~p~~~l~~~~~~~~~~~~~~~P~ly~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~ 811 (978)
.++++.|++|.|++.+.+|+++++.++ ++++.+.+.|+ ++++++++.+.+...+..|+++++++++.+++....
T Consensus 2 ~Pl~~~qiL~inli~d~~~a~al~~e~--~~~~im~r~Pr----~~~~~l~~~~~~~~i~~~g~~~~~~~~~~f~~~~~~ 75 (182)
T PF00689_consen 2 LPLTPIQILWINLITDLLPALALGFEP--PDPDIMKRPPR----DPNEPLINKRLLRRILIQGLIMAAACFFAFFLGLYI 75 (182)
T ss_dssp -SS-HHHHHHHHHTTTHHHHHHGGGSS---STTGGGS-------TTTS-SSSHHHHHHHCCHHHHHHHHHHHHHHHHHHS
T ss_pred CCCcHHHHHHHHHHHHHHHHHHHhcCc--chhhhhhcccc----ccchhhccHHhHhHHHHHHHHHHHHHHHHHHHHhhc
Confidence 358999999999999999999999864 45556666665 688899999999999999999999999888776542
Q ss_pred ccccCCCceehhhHHHHHHHHHHHHHHHHHHHHhhcc--------hhhHHHHHHHHHHHHHHHHHHHHhccCccccchhH
Q 002029 812 QAFRKGGEVIGLEILGTTMYTCVVWVVNCQMALSVTY--------FTYIQHLFIWGGITFWYIFLLAYGAMDPYISTTAY 883 (978)
Q Consensus 812 ~~~~~~g~~~~~~~~~~~~f~~~v~~~~~~~~~~~~~--------~~~~~~~~i~~si~~~~i~~~i~~~i~~~~~~~~~ 883 (978)
......+...+....+|++|+++++.+.+... ..|+ ..+..|..++.++++.++++++..++|. ++.
T Consensus 76 ~~~~~~~~~~~~~~a~T~~F~~lv~~q~~~~~-~~r~~~~~~~~~~~~~~N~~l~~~~~~~~~l~~~i~~~P~-~~~--- 150 (182)
T PF00689_consen 76 FGWDEETNNDNLAQAQTMAFTALVLSQLFNAF-NCRSRRRSVFRFRGIFSNKWLLIAILISIALQILIVYVPG-LNR--- 150 (182)
T ss_dssp TCSSSHHHTTCHHHHHHHHHHHHHHHHHHHHH-HTSSSSSTCTT-STGGGSHHHHHHHHHHHHHHHHHHHSTT-HHH---
T ss_pred cccccccchhHHHHHHHHHHHHHHHHHHhhhc-ccccccccceecccccccchHHHHHHHHHHHHHHHhcchh-hHh---
Confidence 11111111112446789999999998877754 3333 2345778889999999999999999984 343
Q ss_pred HHHHHHhcCChHHHHHHHHHHHHHHHHHHHHHHH
Q 002029 884 KVFIEACAPAPSFWLITLLVLMSSLLPYFTYSAI 917 (978)
Q Consensus 884 ~~~~~~~~~s~~~wl~il~~~~~~ll~~~~~k~~ 917 (978)
+++..+.++..|+.+++.+++.++.+++.|++
T Consensus 151 --~f~~~~l~~~~w~~~l~~~~~~~~~~ei~K~i 182 (182)
T PF00689_consen 151 --IFGTAPLPLWQWLICLALALLPFIVDEIRKLI 182 (182)
T ss_dssp --HST----THHHHHCHHHHHCHHHHHHHHHHHH
T ss_pred --hhcccCCCHHHHHHHHHHHHHHHHHHHHHHHC
Confidence 56677889999999999999999999999975
No 39
>PRK10513 sugar phosphate phosphatase; Provisional
Probab=98.87 E-value=3.7e-09 Score=115.20 Aligned_cols=198 Identities=15% Similarity=0.120 Sum_probs=107.4
Q ss_pred ccEEEEEEeeccccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCc-------cccCceEEEE--ecCCCcccc
Q 002029 477 NLILLGATAVEDKLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSL-------LRQGMRQVII--SSETPESKT 547 (978)
Q Consensus 477 dl~llG~i~ieD~lr~~v~~~I~~L~~aGIkv~mlTGD~~~tA~~ia~~~gl-------~~~~~~~i~i--~~~~~~~~~ 547 (978)
|.||+.- ..++-+.+.++|++|+++|+++++.||+....+..+.+++++ +..|+..+.- +++......
T Consensus 11 DGTLl~~---~~~i~~~~~~ai~~l~~~G~~~~iaTGR~~~~~~~~~~~l~~~~~~~~~I~~NGa~i~~~~~~~~i~~~~ 87 (270)
T PRK10513 11 DGTLLLP---DHTISPAVKQAIAAARAKGVNVVLTTGRPYAGVHRYLKELHMEQPGDYCITNNGALVQKAADGETVAQTA 87 (270)
T ss_pred CCcCcCC---CCccCHHHHHHHHHHHHCCCEEEEecCCChHHHHHHHHHhCCCCCCCeEEEcCCeEEEECCCCCEEEecC
Confidence 4555532 235788899999999999999999999999999999999986 3344444432 121122222
Q ss_pred cchhhhHHHHHHHHHHHHHHHHHh-------------------hhhhhcc------ccCCC--CCeEEEEcCchhhhhch
Q 002029 548 LEKSEDKSAAAAALKASVLHQLIR-------------------GKELLDS------SNESL--GPLALIIDGKSLTYALE 600 (978)
Q Consensus 548 ~~~~~~~~~~~~~~~~~~~~~~~~-------------------~~~~~~~------~~~~~--~~~~lvi~G~~l~~~~~ 600 (978)
++.+.....++............. ....... ..... ....+++..+.- +
T Consensus 88 l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~---~- 163 (270)
T PRK10513 88 LSYDDYLYLEKLSREVGVHFHALDRNTLYTANRDISYYTVHESFLTGIPLVFREVEKMDPNLQFPKVMMIDEPEI---L- 163 (270)
T ss_pred CCHHHHHHHHHHHHHcCCcEEEEECCEEEEecCCcchhHHHhhhhccCCccccchhhccccCCceEEEEeCCHHH---H-
Confidence 333222222211111010000000 0000000 00000 000111111100 0
Q ss_pred hhHHHHHHHHH-hccC----eeEEEeCCch--hHHHHHHHHHccCC---CeEEEEcCCcCCHHHhhhccccccccCCccc
Q 002029 601 DDVKDLFLELA-IGCA----SVICCRSSPK--QKALVTRLVKTKTS---STTLAIGDGANDVGMLQEADIGVGISGVEGM 670 (978)
Q Consensus 601 ~~~~~~f~~l~-~~~~----~vi~~r~sP~--qK~~iV~~lk~~~~---~~v~aiGDG~ND~~ml~~AdvGI~i~g~e~~ 670 (978)
+++...+.... .... ..-+..++|. .|+.-++.+.++.| +.|+++|||.||.+||+.|++||+|.+.. .
T Consensus 164 ~~~~~~~~~~~~~~~~~~~s~~~~~eI~~~gvsKg~al~~l~~~~gi~~~~v~afGD~~NDi~Ml~~ag~~vAm~NA~-~ 242 (270)
T PRK10513 164 DAAIARIPAEVKERYTVLKSAPYFLEILDKRVNKGTGVKSLAEHLGIKPEEVMAIGDQENDIAMIEYAGVGVAMGNAI-P 242 (270)
T ss_pred HHHHHHhHHHhcCcEEEEEecCeeEEEeCCCCChHHHHHHHHHHhCCCHHHEEEECCchhhHHHHHhCCceEEecCcc-H
Confidence 01111121110 0010 0113345554 79999998887655 67999999999999999999999996554 3
Q ss_pred hhccccceehhc
Q 002029 671 QAVMSSDIAIAQ 682 (978)
Q Consensus 671 ~a~~asD~vi~~ 682 (978)
.++.+||++..+
T Consensus 243 ~vK~~A~~vt~~ 254 (270)
T PRK10513 243 SVKEVAQFVTKS 254 (270)
T ss_pred HHHHhcCeeccC
Confidence 489999999865
No 40
>COG0561 Cof Predicted hydrolases of the HAD superfamily [General function prediction only]
Probab=98.79 E-value=5.6e-08 Score=105.57 Aligned_cols=189 Identities=17% Similarity=0.186 Sum_probs=105.6
Q ss_pred ccc-cCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCcc----ccCceEEEEecCCCcccccchhhhHHHHHHHH
Q 002029 487 EDK-LQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLL----RQGMRQVIISSETPESKTLEKSEDKSAAAAAL 561 (978)
Q Consensus 487 eD~-lr~~v~~~I~~L~~aGIkv~mlTGD~~~tA~~ia~~~gl~----~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~ 561 (978)
.|. +.+.+.++|+++++.|+++.++||++...+..+.+++++- ..++..+...++......++.+..........
T Consensus 17 ~~~~i~~~~~~al~~~~~~g~~v~iaTGR~~~~~~~~~~~l~~~~~~I~~NGa~i~~~~~~i~~~~l~~~~~~~i~~~~~ 96 (264)
T COG0561 17 SNKTISPETKEALARLREKGVKVVLATGRPLPDVLSILEELGLDGPLITFNGALIYNGGELLFQKPLSREDVEELLELLE 96 (264)
T ss_pred CCCccCHHHHHHHHHHHHCCCEEEEECCCChHHHHHHHHHcCCCccEEEeCCeEEecCCcEEeeecCCHHHHHHHHHHHH
Confidence 444 8899999999999999999999999999999999999874 34555444443322233333333332222221
Q ss_pred HH-HHHHHHHhhhh-----hh--cccc-CC-------------CCC-eEEEEcCchhhhhchhhHHHHHHHHHhcc--Ce
Q 002029 562 KA-SVLHQLIRGKE-----LL--DSSN-ES-------------LGP-LALIIDGKSLTYALEDDVKDLFLELAIGC--AS 616 (978)
Q Consensus 562 ~~-~~~~~~~~~~~-----~~--~~~~-~~-------------~~~-~~lvi~G~~l~~~~~~~~~~~f~~l~~~~--~~ 616 (978)
.. ........... .. .... .. ... ..+.++- ..+.+.+....+...+ ..
T Consensus 97 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~l~~~~~~~~ 170 (264)
T COG0561 97 DFQGIALVLYTDDGIYLTKKRGTFAEARIGFANLSPVGREAAELEDNKIIALDK------DHEILEELVEALRKRFPDLG 170 (264)
T ss_pred hccCceEEEEeccceeeccCCCcccccccccccccccccchhhcCcceEEEEec------ChHhHHHHHHHHhhhccccc
Confidence 11 00000000000 00 0000 00 000 0000000 0011111111121111 12
Q ss_pred eEEEeC-------Cch--hHHHHHHHHHccCC---CeEEEEcCCcCCHHHhhhccccccccCCccchhccccceehhc
Q 002029 617 VICCRS-------SPK--QKALVTRLVKTKTS---STTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDIAIAQ 682 (978)
Q Consensus 617 vi~~r~-------sP~--qK~~iV~~lk~~~~---~~v~aiGDG~ND~~ml~~AdvGI~i~g~e~~~a~~asD~vi~~ 682 (978)
..+.+. .|. +|+..++.+.+..| ..|+|+|||.||.+||+.|+.||+|.+. ...++..||++...
T Consensus 171 ~~~~~s~~~~lei~~~g~~K~~al~~l~~~lgi~~~~v~afGD~~ND~~Ml~~ag~gvam~Na-~~~~k~~A~~vt~~ 247 (264)
T COG0561 171 LTVSSSGPISLDITPKGVSKGYALQRLAKLLGIKLEEVIAFGDSTNDIEMLEVAGLGVAMGNA-DEELKELADYVTTS 247 (264)
T ss_pred eEEEEcCCceEEEecCCCchHHHHHHHHHHhCCCHHHeEEeCCccccHHHHHhcCeeeeccCC-CHHHHhhCCcccCC
Confidence 333333 333 79999998887655 4599999999999999999999999766 44589999966444
No 41
>PRK15126 thiamin pyrimidine pyrophosphate hydrolase; Provisional
Probab=98.77 E-value=9.3e-09 Score=112.15 Aligned_cols=199 Identities=17% Similarity=0.119 Sum_probs=107.6
Q ss_pred ccEEEEEEeeccccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCc----cccCceEEEE-ecCCCcccccchh
Q 002029 477 NLILLGATAVEDKLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSL----LRQGMRQVII-SSETPESKTLEKS 551 (978)
Q Consensus 477 dl~llG~i~ieD~lr~~v~~~I~~L~~aGIkv~mlTGD~~~tA~~ia~~~gl----~~~~~~~i~i-~~~~~~~~~~~~~ 551 (978)
|.||+.- ...+.+.+.++|++|+++|+++.+.||+....+..+.+++++ +..++..+.- +++......++.+
T Consensus 10 DGTLl~~---~~~i~~~~~~ai~~l~~~G~~~~iaTGR~~~~~~~~~~~l~~~~~~I~~NGa~I~~~~~~~l~~~~i~~~ 86 (272)
T PRK15126 10 DGTLLMP---DHHLGEKTLSTLARLRERDITLTFATGRHVLEMQHILGALSLDAYLITGNGTRVHSLEGELLHRQDLPAD 86 (272)
T ss_pred CCcCcCC---CCcCCHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHcCCCCcEEecCCcEEEcCCCCEEEeecCCHH
Confidence 4555531 235888999999999999999999999999999999999886 3334444331 2211222233333
Q ss_pred hhHHHHHHHHHHHHH---------------HHHHhhhh--h--hcc---c-cCCCCCeEEEEcCchhhhhchhhHHHHHH
Q 002029 552 EDKSAAAAALKASVL---------------HQLIRGKE--L--LDS---S-NESLGPLALIIDGKSLTYALEDDVKDLFL 608 (978)
Q Consensus 552 ~~~~~~~~~~~~~~~---------------~~~~~~~~--~--~~~---~-~~~~~~~~lvi~G~~l~~~~~~~~~~~f~ 608 (978)
...+.++........ ........ . ... . ........+.+-+.. .. + +++...+.
T Consensus 87 ~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ki~~~~~~-~~-~-~~~~~~l~ 163 (272)
T PRK15126 87 VAELVLHQQWDTRASMHVFNDDGWFTGKEIPALLQAHVYSGFRYQLIDLKRLPAHGVTKICFCGDH-DD-L-TRLQIQLN 163 (272)
T ss_pred HHHHHHHHhhhcCcEEEEEcCCeEEecCCcHHHHHHHHhcCCceEEecHHHccccCceEEEEECCH-HH-H-HHHHHHHH
Confidence 333333221111000 00000000 0 000 0 000001111111111 00 0 11222221
Q ss_pred HHHh-ccC----eeEEEeCCch--hHHHHHHHHHccCC---CeEEEEcCCcCCHHHhhhccccccccCCccchhccccce
Q 002029 609 ELAI-GCA----SVICCRSSPK--QKALVTRLVKTKTS---STTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDI 678 (978)
Q Consensus 609 ~l~~-~~~----~vi~~r~sP~--qK~~iV~~lk~~~~---~~v~aiGDG~ND~~ml~~AdvGI~i~g~e~~~a~~asD~ 678 (978)
.... ... ..-+..++|. .|+.-++.+.+..| ..|+++|||.||++||+.|+.||+|.+.. .+++.+||+
T Consensus 164 ~~~~~~~~~~~s~~~~~eI~~~g~sKg~al~~l~~~~gi~~~~v~afGD~~NDi~Ml~~ag~~vAm~Na~-~~vK~~A~~ 242 (272)
T PRK15126 164 EALGERAHLCFSATDCLEVLPVGCNKGAALAVLSQHLGLSLADCMAFGDAMNDREMLGSVGRGFIMGNAM-PQLRAELPH 242 (272)
T ss_pred HHhcCCEEEEEcCCcEEEeecCCCChHHHHHHHHHHhCCCHHHeEEecCCHHHHHHHHHcCCceeccCCh-HHHHHhCCC
Confidence 1100 001 0123456666 69999999987655 67999999999999999999999996554 348888886
Q ss_pred --ehhc
Q 002029 679 --AIAQ 682 (978)
Q Consensus 679 --vi~~ 682 (978)
+..+
T Consensus 243 ~~v~~~ 248 (272)
T PRK15126 243 LPVIGH 248 (272)
T ss_pred CeecCC
Confidence 5443
No 42
>COG0560 SerB Phosphoserine phosphatase [Amino acid transport and metabolism]
Probab=98.75 E-value=7.9e-08 Score=99.65 Aligned_cols=112 Identities=22% Similarity=0.251 Sum_probs=86.5
Q ss_pred cccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCccccCceEEEEecCCCcccccchhhhHHHHHHHHHHHHHH
Q 002029 488 DKLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQGMRQVIISSETPESKTLEKSEDKSAAAAALKASVLH 567 (978)
Q Consensus 488 D~lr~~v~~~I~~L~~aGIkv~mlTGD~~~tA~~ia~~~gl~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 567 (978)
.++.+++.+.++.++++|.+||++||-...-+..+|+.+|+-..-...+..+..
T Consensus 76 ~~l~~ga~elv~~lk~~G~~v~iiSgg~~~lv~~ia~~lg~d~~~an~l~~~dG-------------------------- 129 (212)
T COG0560 76 LRLTPGAEELVAALKAAGAKVVIISGGFTFLVEPIAERLGIDYVVANELEIDDG-------------------------- 129 (212)
T ss_pred CcCCccHHHHHHHHHHCCCEEEEEcCChHHHHHHHHHHhCCchheeeEEEEeCC--------------------------
Confidence 789999999999999999999999999999999999999995543333222210
Q ss_pred HHHhhhhhhccccCCCCCeEEEEcCchhhhhchhhHHHHHHHHHhccCeeEEEeCCchhHHHHHHHHHccCC---CeEEE
Q 002029 568 QLIRGKELLDSSNESLGPLALIIDGKSLTYALEDDVKDLFLELAIGCASVICCRSSPKQKALVTRLVKTKTS---STTLA 644 (978)
Q Consensus 568 ~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~f~~l~~~~~~vi~~r~sP~qK~~iV~~lk~~~~---~~v~a 644 (978)
.++|. ++.-.+..+.|...++.+.+..| +.+.|
T Consensus 130 ---------------------~ltG~-----------------------v~g~~~~~~~K~~~l~~~~~~~g~~~~~~~a 165 (212)
T COG0560 130 ---------------------KLTGR-----------------------VVGPICDGEGKAKALRELAAELGIPLEETVA 165 (212)
T ss_pred ---------------------EEece-----------------------eeeeecCcchHHHHHHHHHHHcCCCHHHeEE
Confidence 12222 23334455789988866665445 46999
Q ss_pred EcCCcCCHHHhhhccccccccCCcc
Q 002029 645 IGDGANDVGMLQEADIGVGISGVEG 669 (978)
Q Consensus 645 iGDG~ND~~ml~~AdvGI~i~g~e~ 669 (978)
+|||.||.|||+.|+.+|++.....
T Consensus 166 ~gDs~nDlpml~~ag~~ia~n~~~~ 190 (212)
T COG0560 166 YGDSANDLPMLEAAGLPIAVNPKPK 190 (212)
T ss_pred EcCchhhHHHHHhCCCCeEeCcCHH
Confidence 9999999999999999999977654
No 43
>TIGR02137 HSK-PSP phosphoserine phosphatase/homoserine phosphotransferase bifunctional protein. This enzyme is a member of the haloacid dehalogenase (HAD) superfamily, specifically part of subfamily IB by virtue of the presence of an alpha helical domain in between motifs I and II of the HAD domain . The closest homologs to this family are monofunctional phosphoserine phosphatases (TIGR00338).
Probab=98.69 E-value=6.5e-08 Score=99.80 Aligned_cols=126 Identities=19% Similarity=0.147 Sum_probs=91.2
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCccccCceEEEEecCCCcccccchhhhHHHHHHHHHHHHHHH
Q 002029 489 KLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQGMRQVIISSETPESKTLEKSEDKSAAAAALKASVLHQ 568 (978)
Q Consensus 489 ~lr~~v~~~I~~L~~aGIkv~mlTGD~~~tA~~ia~~~gl~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 568 (978)
++.|++.+.|+.+++.| ++.++||-....+..+++.+|+-.--+..+.++...
T Consensus 68 ~l~pga~ell~~lk~~~-~~~IVS~~~~~~~~~il~~lgi~~~~an~l~~~~~g-------------------------- 120 (203)
T TIGR02137 68 KPLEGAVEFVDWLRERF-QVVILSDTFYEFSQPLMRQLGFPTLLCHKLEIDDSD-------------------------- 120 (203)
T ss_pred CCCccHHHHHHHHHhCC-eEEEEeCChHHHHHHHHHHcCCchhhceeeEEecCC--------------------------
Confidence 58999999999999975 999999999999999999999842111111111100
Q ss_pred HHhhhhhhccccCCCCCeEEEEcCchhhhhchhhHHHHHHHHHhccCeeEEEeCCchhHHHHHHHHHccCCCeEEEEcCC
Q 002029 569 LIRGKELLDSSNESLGPLALIIDGKSLTYALEDDVKDLFLELAIGCASVICCRSSPKQKALVTRLVKTKTSSTTLAIGDG 648 (978)
Q Consensus 569 ~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~f~~l~~~~~~vi~~r~sP~qK~~iV~~lk~~~~~~v~aiGDG 648 (978)
.++|. .. ..+..|..+++.+++ .+..+.++|||
T Consensus 121 --------------------~~tG~------------------------~~--~~~~~K~~~l~~l~~-~~~~~v~vGDs 153 (203)
T TIGR02137 121 --------------------RVVGY------------------------QL--RQKDPKRQSVIAFKS-LYYRVIAAGDS 153 (203)
T ss_pred --------------------eeECe------------------------ee--cCcchHHHHHHHHHh-hCCCEEEEeCC
Confidence 11111 11 346789999999976 67789999999
Q ss_pred cCCHHHhhhccccccccCCccchhccccceehhc-hhhhHHH
Q 002029 649 ANDVGMLQEADIGVGISGVEGMQAVMSSDIAIAQ-FRFLERL 689 (978)
Q Consensus 649 ~ND~~ml~~AdvGI~i~g~e~~~a~~asD~vi~~-f~~l~~l 689 (978)
.||.+|++.|++||++..++.. ...+-|+.... +..|..+
T Consensus 154 ~nDl~ml~~Ag~~ia~~ak~~~-~~~~~~~~~~~~~~~~~~~ 194 (203)
T TIGR02137 154 YNDTTMLSEAHAGILFHAPENV-IREFPQFPAVHTYEDLKRE 194 (203)
T ss_pred HHHHHHHHhCCCCEEecCCHHH-HHhCCCCCcccCHHHHHHH
Confidence 9999999999999999888774 33444655443 5555555
No 44
>PRK10976 putative hydrolase; Provisional
Probab=98.66 E-value=2.8e-08 Score=108.08 Aligned_cols=190 Identities=15% Similarity=0.116 Sum_probs=102.2
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCc----cccCceEEEE-ecCCCcccccchhhhHHHHHHHHHH
Q 002029 489 KLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSL----LRQGMRQVII-SSETPESKTLEKSEDKSAAAAALKA 563 (978)
Q Consensus 489 ~lr~~v~~~I~~L~~aGIkv~mlTGD~~~tA~~ia~~~gl----~~~~~~~i~i-~~~~~~~~~~~~~~~~~~~~~~~~~ 563 (978)
++.+.+.++|++++++|+++.+.||+....+..+.+.+++ +..++..+.- +++......++.+...+.+......
T Consensus 19 ~is~~~~~ai~~l~~~G~~~~iaTGR~~~~~~~~~~~l~~~~~~I~~NGa~i~~~~~~~i~~~~l~~~~~~~i~~~~~~~ 98 (266)
T PRK10976 19 TLSPYAKETLKLLTARGIHFVFATGRHHVDVGQIRDNLEIKSYMITSNGARVHDTDGNLIFSHNLDRDIASDLFGVVHDN 98 (266)
T ss_pred cCCHHHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHhcCCCCeEEEcCCcEEECCCCCEehhhcCCHHHHHHHHHhhccc
Confidence 4788899999999999999999999999999999999886 3334443331 1211222233333333322211110
Q ss_pred -HHHHHHHhhh------------hhhccc----------c-C-CCCCeEEEEcCchhhhhchhhHHHHHHHHH-hccC--
Q 002029 564 -SVLHQLIRGK------------ELLDSS----------N-E-SLGPLALIIDGKSLTYALEDDVKDLFLELA-IGCA-- 615 (978)
Q Consensus 564 -~~~~~~~~~~------------~~~~~~----------~-~-~~~~~~lvi~G~~l~~~~~~~~~~~f~~l~-~~~~-- 615 (978)
.....+.... ...... . . ......++..++. .. + +.+.+.+.... ....
T Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ki~~~~~~~-~~-~-~~~~~~l~~~~~~~~~~~ 175 (266)
T PRK10976 99 PDIITNVYRDDEWFMNRHRPEEMRFFKEAVFKYQLYEPGLLEPDGVSKVFFTCDSH-EK-L-LPLEQAINARWGDRVNVS 175 (266)
T ss_pred CCEEEEEEcCCeEEEcCCChHHHHHHHhcCCcceeechhhcccCCceEEEEEcCCH-HH-H-HHHHHHHHHHhCCcEEEE
Confidence 0000000000 000000 0 0 0000111111110 00 0 01112221110 0011
Q ss_pred --eeEEEeCCch--hHHHHHHHHHccCC---CeEEEEcCCcCCHHHhhhccccccccCCccchhccccc--eehhc
Q 002029 616 --SVICCRSSPK--QKALVTRLVKTKTS---STTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSD--IAIAQ 682 (978)
Q Consensus 616 --~vi~~r~sP~--qK~~iV~~lk~~~~---~~v~aiGDG~ND~~ml~~AdvGI~i~g~e~~~a~~asD--~vi~~ 682 (978)
..-+..+.|. .|+..++.+.++.| +.|+++|||.||.+||+.|+.||+|.+... .++..|| ++..+
T Consensus 176 ~s~~~~~eI~~~gvsKg~al~~l~~~lgi~~~~viafGD~~NDi~Ml~~ag~~vAm~NA~~-~vK~~A~~~~v~~~ 250 (266)
T PRK10976 176 FSTLTCLEVMAGGVSKGHALEAVAKKLGYSLKDCIAFGDGMNDAEMLSMAGKGCIMGNAHQ-RLKDLLPELEVIGS 250 (266)
T ss_pred EeCCceEEEEcCCCChHHHHHHHHHHcCCCHHHeEEEcCCcccHHHHHHcCCCeeecCCcH-HHHHhCCCCeeccc
Confidence 0123455665 69999998887655 679999999999999999999999966544 3788887 56543
No 45
>PRK11133 serB phosphoserine phosphatase; Provisional
Probab=98.66 E-value=6.9e-08 Score=106.39 Aligned_cols=129 Identities=22% Similarity=0.223 Sum_probs=91.9
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCccccCceEEEEecCCCcccccchhhhHHHHHHHHHHHHHHH
Q 002029 489 KLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQGMRQVIISSETPESKTLEKSEDKSAAAAALKASVLHQ 568 (978)
Q Consensus 489 ~lr~~v~~~I~~L~~aGIkv~mlTGD~~~tA~~ia~~~gl~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 568 (978)
++.||+.+.|+.|+++|+++.++||.....+..+..++|+...-.+.+.+...
T Consensus 181 ~l~pGa~elL~~Lk~~G~~~aIvSgg~~~~~~~l~~~Lgld~~~an~lei~dg--------------------------- 233 (322)
T PRK11133 181 PLMPGLTELVLKLQALGWKVAIASGGFTYFADYLRDKLRLDAAVANELEIMDG--------------------------- 233 (322)
T ss_pred CCChhHHHHHHHHHHcCCEEEEEECCcchhHHHHHHHcCCCeEEEeEEEEECC---------------------------
Confidence 58999999999999999999999999988888888888873211111111000
Q ss_pred HHhhhhhhccccCCCCCeEEEEcCchhhhhchhhHHHHHHHHHhccCeeEEE-eCCchhHHHHHHHHHccCC---CeEEE
Q 002029 569 LIRGKELLDSSNESLGPLALIIDGKSLTYALEDDVKDLFLELAIGCASVICC-RSSPKQKALVTRLVKTKTS---STTLA 644 (978)
Q Consensus 569 ~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~f~~l~~~~~~vi~~-r~sP~qK~~iV~~lk~~~~---~~v~a 644 (978)
.++|. +.. -+..+.|...++.+.+..| +.|+|
T Consensus 234 --------------------~ltg~------------------------v~g~iv~~k~K~~~L~~la~~lgi~~~qtIa 269 (322)
T PRK11133 234 --------------------KLTGN------------------------VLGDIVDAQYKADTLTRLAQEYEIPLAQTVA 269 (322)
T ss_pred --------------------EEEeE------------------------ecCccCCcccHHHHHHHHHHHcCCChhhEEE
Confidence 11111 110 1234678888888776444 68999
Q ss_pred EcCCcCCHHHhhhccccccccCCccchhccccceehhchhhhHHHHH
Q 002029 645 IGDGANDVGMLQEADIGVGISGVEGMQAVMSSDIAIAQFRFLERLLL 691 (978)
Q Consensus 645 iGDG~ND~~ml~~AdvGI~i~g~e~~~a~~asD~vi~~f~~l~~lll 691 (978)
+|||.||.+|++.|++||++..++. .+..||.++. +..|..+|.
T Consensus 270 VGDg~NDl~m~~~AGlgiA~nAkp~--Vk~~Ad~~i~-~~~l~~~l~ 313 (322)
T PRK11133 270 IGDGANDLPMIKAAGLGIAYHAKPK--VNEQAQVTIR-HADLMGVLC 313 (322)
T ss_pred EECCHHHHHHHHHCCCeEEeCCCHH--HHhhCCEEec-CcCHHHHHH
Confidence 9999999999999999999955544 6789999996 444444443
No 46
>PRK01158 phosphoglycolate phosphatase; Provisional
Probab=98.65 E-value=9.3e-08 Score=101.52 Aligned_cols=182 Identities=16% Similarity=0.158 Sum_probs=99.4
Q ss_pred cCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCcc----ccCceEEEEecCCCcccccchhhhHHHHHHHHHHHH
Q 002029 490 LQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLL----RQGMRQVIISSETPESKTLEKSEDKSAAAAALKASV 565 (978)
Q Consensus 490 lr~~v~~~I~~L~~aGIkv~mlTGD~~~tA~~ia~~~gl~----~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~ 565 (978)
+.+.+.++|++|+++|++++++||+....+..+++.+++- ..++..+..............+.....+...
T Consensus 21 i~~~~~~al~~l~~~G~~~~iaTGR~~~~~~~~~~~l~~~~~~i~~nGa~i~~~~~~~~~~~~~~~~~~~~~~~~----- 95 (230)
T PRK01158 21 LSLKAVEAIRKAEKLGIPVILATGNVLCFARAAAKLIGTSGPVIAENGGVISVGFDGKRIFLGDIEECEKAYSEL----- 95 (230)
T ss_pred cCHHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHhCCCCcEEEecCeEEEEcCCCCEEEEcchHHHHHHHHHH-----
Confidence 7789999999999999999999999999999999988863 3344333322111111111111111111110
Q ss_pred HHHHHhhhhhhccccCCCCCeEEEE-cCchhhhhchhhHHHHHHHHHh---ccCeeEEEeCCchh--HHHHHHHHHccCC
Q 002029 566 LHQLIRGKELLDSSNESLGPLALII-DGKSLTYALEDDVKDLFLELAI---GCASVICCRSSPKQ--KALVTRLVKTKTS 639 (978)
Q Consensus 566 ~~~~~~~~~~~~~~~~~~~~~~lvi-~G~~l~~~~~~~~~~~f~~l~~---~~~~vi~~r~sP~q--K~~iV~~lk~~~~ 639 (978)
..........+...........+.+ ..... ++..+.+..... ...+..+..+.|.. |+..++.+.++.|
T Consensus 96 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~l~~~~~~~~~~~~~~~~ei~~~~~~Kg~al~~l~~~~~ 170 (230)
T PRK01158 96 KKRFPEASTSLTKLDPDYRKTEVALRRTVPV-----EEVRELLEELGLDLEIVDSGFAIHIKSPGVNKGTGLKKLAELMG 170 (230)
T ss_pred HHhccccceeeecCCcccccceeeecccccH-----HHHHHHHHHcCCcEEEEecceEEEEeeCCCChHHHHHHHHHHhC
Confidence 0000000000000000000001111 11111 122222221110 01111234555554 9998888876544
Q ss_pred ---CeEEEEcCCcCCHHHhhhccccccccCCccchhccccceehhc
Q 002029 640 ---STTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDIAIAQ 682 (978)
Q Consensus 640 ---~~v~aiGDG~ND~~ml~~AdvGI~i~g~e~~~a~~asD~vi~~ 682 (978)
..++++|||.||.+|++.|++|++|.+... .++..||++..+
T Consensus 171 i~~~~~i~~GD~~NDi~m~~~ag~~vam~Na~~-~vk~~a~~v~~~ 215 (230)
T PRK01158 171 IDPEEVAAIGDSENDLEMFEVAGFGVAVANADE-ELKEAADYVTEK 215 (230)
T ss_pred CCHHHEEEECCchhhHHHHHhcCceEEecCccH-HHHHhcceEecC
Confidence 579999999999999999999999965543 478899998865
No 47
>PF08282 Hydrolase_3: haloacid dehalogenase-like hydrolase; InterPro: IPR013200 The Haloacid Dehydrogenase (HAD) superfamily includes phosphatases, phosphonatases, P-type ATPases, beta-phosphoglucomutases, phosphomannomutases, and dehalogenases, which are involved in a variety of cellular processes ranging from amino acid biosynthesis to detoxification []. This HAD domain is found in several distinct enzymes including: Phospholipid-transporting ATPase 1 (3.6.3.1 from EC), a putative lipid-flipping enzyme involved in cold tolerance in Arabidopsis [] 3-deoxy-D-manno-octulosonate (KDO) 8-phosphate phosphatase (3.1.3.45 from EC), which catalyses the final step in the biosynthesis of KDO - a component of lipopolysaccharide in Gram-negative bacteria [] Mannosyl-3-phosphoglycerate phosphatase (3.1.3.70 from EC), which hydrolyzes mannosyl-3-phosphoglycerate to form the osmolyte mannosylglycerate [] Phosphoglycolate phopshatase (3.1.3.18 from EC), which catalyses the dephosphorylation of 2-phosphoglycolate [] ; PDB: 2B30_B 3R4C_A 1XVI_B 3IJ5_B 3MMZ_C 3L7Y_A 1XPJ_C 1RLT_B 1RLM_B 2HF2_A ....
Probab=98.59 E-value=2.5e-08 Score=107.23 Aligned_cols=194 Identities=15% Similarity=0.153 Sum_probs=105.5
Q ss_pred cccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCcc----ccCceEEEEecCC--CcccccchhhhHHHHHHHH
Q 002029 488 DKLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLL----RQGMRQVIISSET--PESKTLEKSEDKSAAAAAL 561 (978)
Q Consensus 488 D~lr~~v~~~I~~L~~aGIkv~mlTGD~~~tA~~ia~~~gl~----~~~~~~i~i~~~~--~~~~~~~~~~~~~~~~~~~ 561 (978)
.++.+.+.++|++|+++|+++.+.||+....+..+..++++- ..++..+ ..... .....++.+.....+....
T Consensus 14 ~~i~~~~~~al~~l~~~g~~~~i~TGR~~~~~~~~~~~~~~~~~~I~~nGa~i-~~~~~~~l~~~~i~~~~~~~i~~~~~ 92 (254)
T PF08282_consen 14 GKISPETIEALKELQEKGIKLVIATGRSYSSIKRLLKELGIDDYFICSNGALI-DDPKGKILYEKPIDSDDVKKILKYLK 92 (254)
T ss_dssp SSSCHHHHHHHHHHHHTTCEEEEECSSTHHHHHHHHHHTTHCSEEEEGGGTEE-EETTTEEEEEESB-HHHHHHHHHHHH
T ss_pred CeeCHHHHHHHHhhcccceEEEEEccCcccccccccccccchhhhccccccee-eecccccchhhheeccchhheeehhh
Confidence 346789999999999999999999999999999999988863 3344444 12221 1222333333333332222
Q ss_pred HHHHHHHHHhhhhhhcccc-------------------------CCCCCeEEEEcCc-hhhhhchhhHHHHHHHHH-hcc
Q 002029 562 KASVLHQLIRGKELLDSSN-------------------------ESLGPLALIIDGK-SLTYALEDDVKDLFLELA-IGC 614 (978)
Q Consensus 562 ~~~~~~~~~~~~~~~~~~~-------------------------~~~~~~~lvi~G~-~l~~~~~~~~~~~f~~l~-~~~ 614 (978)
...+...+........... ....-..+.+.++ .-...+.+++.+.+.... ...
T Consensus 93 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ki~~~~~~~~~~~l~~~l~~~~~~~~~~~~ 172 (254)
T PF08282_consen 93 EHNISFFFYTDDDIYIYENKDEEELFFEHKFFNFKESIVSEDDLEDEEIFKILFFPDPEDLEQLREELKKKFPNLIDVVR 172 (254)
T ss_dssp HTTCEEEEEESSEEEESSTTCHHHHHHHHHHTSCEEEESHHHHHHCSSESEEEEESCHHHHHHHHHHHHHHHTTTEEEEE
T ss_pred hcccccccccceeeecccccccchhhhhhcccccccccccccccccccceeeeccccchhhhhhhhhhccccCcceeEEE
Confidence 2111000000000000000 0000011111111 111111223333332110 000
Q ss_pred CeeEEEeCCc--hhHHHHHHHHHccCC---CeEEEEcCCcCCHHHhhhccccccccCCccchhccccceehhch
Q 002029 615 ASVICCRSSP--KQKALVTRLVKTKTS---STTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDIAIAQF 683 (978)
Q Consensus 615 ~~vi~~r~sP--~qK~~iV~~lk~~~~---~~v~aiGDG~ND~~ml~~AdvGI~i~g~e~~~a~~asD~vi~~f 683 (978)
...-+..++| -.|+..++.+.+..| +.++++||+.||.+|++.|+.||+|.+.... .+..||++...-
T Consensus 173 ~~~~~lei~~~~vsK~~ai~~l~~~~~i~~~~~~~~GD~~ND~~Ml~~~~~~~am~na~~~-~k~~a~~i~~~~ 245 (254)
T PF08282_consen 173 SSPYFLEITPKGVSKGSAIKYLLEYLGISPEDIIAFGDSENDIEMLELAGYSVAMGNATPE-LKKAADYITPSN 245 (254)
T ss_dssp EETTEEEEEETTSSHHHHHHHHHHHHTTSGGGEEEEESSGGGHHHHHHSSEEEEETTS-HH-HHHHSSEEESSG
T ss_pred ecccceEEeeCCCCHHHHHHHHhhhcccccceeEEeecccccHhHHhhcCeEEEEcCCCHH-HHHhCCEEecCC
Confidence 1112233445 379999998886543 7899999999999999999999999766543 788999988763
No 48
>TIGR01482 SPP-subfamily Sucrose-phosphate phosphatase subfamily. catalyze the same reaction as SPP.
Probab=98.56 E-value=2.3e-07 Score=98.12 Aligned_cols=178 Identities=16% Similarity=0.197 Sum_probs=97.5
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCc----cccCceEEEEecCCCc--ccccchhhhHHHHHHHHH
Q 002029 489 KLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSL----LRQGMRQVIISSETPE--SKTLEKSEDKSAAAAALK 562 (978)
Q Consensus 489 ~lr~~v~~~I~~L~~aGIkv~mlTGD~~~tA~~ia~~~gl----~~~~~~~i~i~~~~~~--~~~~~~~~~~~~~~~~~~ 562 (978)
.+.+.+.++|++|+++||++.++||+....+..+++.+|+ +..++..+........ ...++.........
T Consensus 15 ~i~~~~~~al~~l~~~Gi~~~~aTGR~~~~~~~~~~~l~~~~~~i~~nGa~i~~~~~~~~~~~~~~~~~~~~~~~~---- 90 (225)
T TIGR01482 15 AINESALEAIRKAESVGIPVVLVTGNSVQFARALAKLIGTPDPVIAENGGEISYNEGMDDIFLAYLEEEWFLDIVI---- 90 (225)
T ss_pred ccCHHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHhCCCCeEEEecCcEEEeCCCCceEEecccCHHHHHHHHH----
Confidence 4778889999999999999999999999999999999884 2223333322211000 00111100000000
Q ss_pred HHHHHHHHhhhhhhccccC-CCCCeEEEEcCchhhhhchhhHHHHHHHHHhcc---CeeEEEeCCch--hHHHHHHHHHc
Q 002029 563 ASVLHQLIRGKELLDSSNE-SLGPLALIIDGKSLTYALEDDVKDLFLELAIGC---ASVICCRSSPK--QKALVTRLVKT 636 (978)
Q Consensus 563 ~~~~~~~~~~~~~~~~~~~-~~~~~~lvi~G~~l~~~~~~~~~~~f~~l~~~~---~~vi~~r~sP~--qK~~iV~~lk~ 636 (978)
.. ............ ......+....+ .+ ........+.... ....+..+.|. .|+..++.+.+
T Consensus 91 ~~-----~~~~~~~~~~~~~~~~~~~~~~~~~-~~-----~~~~~~~~~~~~~~~~~~~~~~ei~~~~~~K~~~i~~l~~ 159 (225)
T TIGR01482 91 AK-----TFPFSRLKVQYPRRASLVKMRYGID-VD-----TVREIIKELGLNLVAVDSGFDIHILPQGVNKGVAVKKLKE 159 (225)
T ss_pred hc-----ccchhhhccccccccceEEEeecCC-HH-----HHHHHHHhcCceEEEecCCcEEEEeeCCCCHHHHHHHHHH
Confidence 00 000000000000 001111111111 11 1111111111111 11124445553 79988888876
Q ss_pred cCC---CeEEEEcCCcCCHHHhhhccccccccCCccchhccccceehhc
Q 002029 637 KTS---STTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDIAIAQ 682 (978)
Q Consensus 637 ~~~---~~v~aiGDG~ND~~ml~~AdvGI~i~g~e~~~a~~asD~vi~~ 682 (978)
+.| ..|++|||+.||.+|++.|++|++|.+... .++..||++..+
T Consensus 160 ~~~i~~~~~i~~GD~~NDi~m~~~ag~~vam~Na~~-~~k~~A~~vt~~ 207 (225)
T TIGR01482 160 KLGIKPGETLVCGDSENDIDLFEVPGFGVAVANAQP-ELKEWADYVTES 207 (225)
T ss_pred HhCCCHHHEEEECCCHhhHHHHHhcCceEEcCChhH-HHHHhcCeecCC
Confidence 544 679999999999999999999999966543 378899998754
No 49
>PLN02887 hydrolase family protein
Probab=98.54 E-value=7.8e-08 Score=113.36 Aligned_cols=62 Identities=27% Similarity=0.389 Sum_probs=50.8
Q ss_pred EeCCch--hHHHHHHHHHccCC---CeEEEEcCCcCCHHHhhhccccccccCCccchhccccceehhc
Q 002029 620 CRSSPK--QKALVTRLVKTKTS---STTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDIAIAQ 682 (978)
Q Consensus 620 ~r~sP~--qK~~iV~~lk~~~~---~~v~aiGDG~ND~~ml~~AdvGI~i~g~e~~~a~~asD~vi~~ 682 (978)
..+.|. .|+.-++.+.++.| ..|+|||||.||++||+.|+.||+|.+... .++.+||++..+
T Consensus 499 lEI~p~gvSKG~ALk~L~e~lGI~~eeviAFGDs~NDIeMLe~AG~gVAMgNA~e-eVK~~Ad~VT~s 565 (580)
T PLN02887 499 LEIVPPGTSKGNGVKMLLNHLGVSPDEIMAIGDGENDIEMLQLASLGVALSNGAE-KTKAVADVIGVS 565 (580)
T ss_pred EEEecCCCCHHHHHHHHHHHcCCCHHHEEEEecchhhHHHHHHCCCEEEeCCCCH-HHHHhCCEEeCC
Confidence 344554 79999998887655 679999999999999999999999965543 488999998764
No 50
>TIGR01487 SPP-like sucrose-phosphate phosphatase-like hydrolase, Archaeal. TIGR01482, in turn, is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases.
Probab=98.53 E-value=3.9e-07 Score=95.62 Aligned_cols=178 Identities=16% Similarity=0.225 Sum_probs=99.3
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCcc----ccCceEEEEecCCCcccccchhhhHHHHHHHHHHH
Q 002029 489 KLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLL----RQGMRQVIISSETPESKTLEKSEDKSAAAAALKAS 564 (978)
Q Consensus 489 ~lr~~v~~~I~~L~~aGIkv~mlTGD~~~tA~~ia~~~gl~----~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~ 564 (978)
++.+++.++|++|+++|+++.++||+....+..+++.+++- ..++..+...... ................ .
T Consensus 18 ~i~~~~~~~i~~l~~~g~~~~~~TGR~~~~~~~~~~~l~~~~~~i~~NGa~i~~~~~~---~~~~~~~~~~~~~~~~-~- 92 (215)
T TIGR01487 18 MISERAIEAIRKAEKKGIPVSLVTGNTVPFARALAVLIGTSGPVVAENGGVIFYNKED---IFLANMEEEWFLDEEK-K- 92 (215)
T ss_pred ccCHHHHHHHHHHHHCCCEEEEEcCCcchhHHHHHHHhCCCCcEEEccCcEEEeCCCc---EEEecccchhhHHHhh-h-
Confidence 38889999999999999999999999999999999988763 2334443332211 1111100000000000 0
Q ss_pred HHHHHHhhhhhhccccCCCCCeEEEEcCchhhhhchhhHHHHHHHHHhc-cCeeEEEeCCc--hhHHHHHHHHHccCC--
Q 002029 565 VLHQLIRGKELLDSSNESLGPLALIIDGKSLTYALEDDVKDLFLELAIG-CASVICCRSSP--KQKALVTRLVKTKTS-- 639 (978)
Q Consensus 565 ~~~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~f~~l~~~-~~~vi~~r~sP--~qK~~iV~~lk~~~~-- 639 (978)
.... ...... ........+..+++... .+...+...... ..+..+..++| -.|+..++.+.+..+
T Consensus 93 --~~~~--~~~~~~-~~~~~~~~~~~~~~~~~-----~~~~~l~~~~~~~~~~~~~~ei~~~~~~K~~~i~~l~~~~~i~ 162 (215)
T TIGR01487 93 --KRFP--RDRLSN-EYPRASLVIMREGKDVD-----EVREIIKERGLNLVDSGFAIHIMKKGVDKGVGVEKLKELLGIK 162 (215)
T ss_pred --hhhh--hhhccc-ccceeEEEEecCCccHH-----HHHHHHHhCCeEEEecCceEEEecCCCChHHHHHHHHHHhCCC
Confidence 0000 000000 00011112222322221 111111111000 00012234444 489999998876544
Q ss_pred -CeEEEEcCCcCCHHHhhhccccccccCCccchhccccceehhc
Q 002029 640 -STTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDIAIAQ 682 (978)
Q Consensus 640 -~~v~aiGDG~ND~~ml~~AdvGI~i~g~e~~~a~~asD~vi~~ 682 (978)
..+++|||+.||.+|++.|++|++|.+.. .+++..||++..+
T Consensus 163 ~~~~i~iGDs~ND~~ml~~ag~~vam~na~-~~~k~~A~~v~~~ 205 (215)
T TIGR01487 163 PEEVAAIGDSENDIDLFRVVGFKVAVANAD-DQLKEIADYVTSN 205 (215)
T ss_pred HHHEEEECCCHHHHHHHHhCCCeEEcCCcc-HHHHHhCCEEcCC
Confidence 46999999999999999999999996554 4488899998864
No 51
>PRK03669 mannosyl-3-phosphoglycerate phosphatase; Reviewed
Probab=98.52 E-value=6e-07 Score=97.77 Aligned_cols=188 Identities=12% Similarity=0.118 Sum_probs=100.0
Q ss_pred cCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCc-----cccCceEEEEecCCC-------cccccchhhhHHHH
Q 002029 490 LQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSL-----LRQGMRQVIISSETP-------ESKTLEKSEDKSAA 557 (978)
Q Consensus 490 lr~~v~~~I~~L~~aGIkv~mlTGD~~~tA~~ia~~~gl-----~~~~~~~i~i~~~~~-------~~~~~~~~~~~~~~ 557 (978)
+-+.+.++|++|+++|+++++.||+....+..+++++|+ +..|+..+....... ....++.+...+.+
T Consensus 25 i~~~~~~ai~~l~~~Gi~~viaTGR~~~~i~~~~~~l~~~~~~~I~~NGa~I~~~~~~~~~~~~~~~~~~l~~~~~~~i~ 104 (271)
T PRK03669 25 DWQPAAPWLTRLREAQVPVILCSSKTAAEMLPLQQTLGLQGLPLIAENGAVIQLDEQWQDHPDFPRIISGISHGEIRQVL 104 (271)
T ss_pred CcHHHHHHHHHHHHcCCeEEEEcCCCHHHHHHHHHHhCCCCCcEEEeCCCEEEecCcccCCCCceEeecCCCHHHHHHHH
Confidence 446789999999999999999999999999999999986 234444444321110 01123333333333
Q ss_pred HHHHHH-HHH---------HHHHhh--hh--hhccccCCCCCeEEEEcCchhhhhchhhHHHHHHHHHhccCe---eEEE
Q 002029 558 AAALKA-SVL---------HQLIRG--KE--LLDSSNESLGPLALIIDGKSLTYALEDDVKDLFLELAIGCAS---VICC 620 (978)
Q Consensus 558 ~~~~~~-~~~---------~~~~~~--~~--~~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~f~~l~~~~~~---vi~~ 620 (978)
+..... ... ...... .. .............+.+.+..- .+ .++.+.+... .+.. .-+.
T Consensus 105 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~-~~~~~~l~~~--~~~~~~~~~~i 179 (271)
T PRK03669 105 NTLREKEGFKFTTFDDVDDATIAEWTGLSRSQAALARLHEASVTLIWRDSDE--RM-AQFTARLAEL--GLQFVQGARFW 179 (271)
T ss_pred HHHHHhcCCceeecccCCHHHHHHHhCCCHHHHHHHhccccCceeEecCCHH--HH-HHHHHHHHHC--CCEEEecCeeE
Confidence 322211 100 000000 00 000000000111122222110 00 1122222210 1111 1244
Q ss_pred eCCch--hHHHHHHHHHccCC------CeEEEEcCCcCCHHHhhhccccccccCCc--cchh---ccccceehhc
Q 002029 621 RSSPK--QKALVTRLVKTKTS------STTLAIGDGANDVGMLQEADIGVGISGVE--GMQA---VMSSDIAIAQ 682 (978)
Q Consensus 621 r~sP~--qK~~iV~~lk~~~~------~~v~aiGDG~ND~~ml~~AdvGI~i~g~e--~~~a---~~asD~vi~~ 682 (978)
.+.|. .|+..++.+.++.| ..|+++|||.||.+||+.|++||+|.+.. ..++ +..+|++...
T Consensus 180 Ei~~~g~sKg~al~~l~~~lgi~~~~~~~viafGDs~NDi~Ml~~ag~gvAM~~~~~~~~~l~~~~~~~~~~~~~ 254 (271)
T PRK03669 180 HVLDASAGKDQAANWLIATYQQLSGTRPTTLGLGDGPNDAPLLDVMDYAVVVKGLNREGVHLQDDDPARVYRTQR 254 (271)
T ss_pred EEecCCCCHHHHHHHHHHHHHhhcCCCceEEEEcCCHHHHHHHHhCCEEEEecCCCCCCcccccccCCceEeccC
Confidence 56664 79998888876533 57999999999999999999999996432 1112 2367776654
No 52
>PRK10530 pyridoxal phosphate (PLP) phosphatase; Provisional
Probab=98.51 E-value=4.5e-07 Score=98.93 Aligned_cols=188 Identities=14% Similarity=0.126 Sum_probs=102.0
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCc----cccCceEEEEe--cCCCcccccchhhhHHHHHHHHH
Q 002029 489 KLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSL----LRQGMRQVIIS--SETPESKTLEKSEDKSAAAAALK 562 (978)
Q Consensus 489 ~lr~~v~~~I~~L~~aGIkv~mlTGD~~~tA~~ia~~~gl----~~~~~~~i~i~--~~~~~~~~~~~~~~~~~~~~~~~ 562 (978)
++.+.+.++|++++++|+++.+.||+....+..+.+++++ +..|+..+.-. ++......++.+...+.++....
T Consensus 20 ~i~~~~~~ai~~~~~~G~~~~iaTGR~~~~~~~~~~~l~~~~~~I~~NGa~i~d~~~~~~l~~~~l~~~~~~~i~~~~~~ 99 (272)
T PRK10530 20 TILPESLEALARAREAGYKVIIVTGRHHVAIHPFYQALALDTPAICCNGTYLYDYQAKKVLEADPLPVQQALQVIEMLDE 99 (272)
T ss_pred ccCHHHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHhcCCCCCEEEcCCcEEEecCCCEEEEecCCCHHHHHHHHHHHHh
Confidence 4788899999999999999999999999999999999875 33444444321 11122233444433333332221
Q ss_pred HHHHH---------------HHHhh---hhhhcccc---------------CCCCCeEEEEcCchhhhhchhhHHHHHHH
Q 002029 563 ASVLH---------------QLIRG---KELLDSSN---------------ESLGPLALIIDGKSLTYALEDDVKDLFLE 609 (978)
Q Consensus 563 ~~~~~---------------~~~~~---~~~~~~~~---------------~~~~~~~lvi~G~~l~~~~~~~~~~~f~~ 609 (978)
..+.. ..... ........ .......+.......... ..+.+.+..
T Consensus 100 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~--~~~~~~~~~ 177 (272)
T PRK10530 100 HQIHGLMYVDDAMLYEHPTGHVIRTLNWAQTLPPEQRPTFTQVDSLAQAARQVNAIWKFALTHEDLPQL--QHFAKHVEH 177 (272)
T ss_pred CCcEEEEEcCCceEecCchHHHHHHhhhhhccchhcccceEEcccHHHHHhhcCCcEEEEEecCCHHHH--HHHHHHHhh
Confidence 11100 00000 00000000 000011122221111100 011111111
Q ss_pred HHhccCee------EEEeCCc--hhHHHHHHHHHccCC---CeEEEEcCCcCCHHHhhhccccccccCCccchhccccce
Q 002029 610 LAIGCASV------ICCRSSP--KQKALVTRLVKTKTS---STTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDI 678 (978)
Q Consensus 610 l~~~~~~v------i~~r~sP--~qK~~iV~~lk~~~~---~~v~aiGDG~ND~~ml~~AdvGI~i~g~e~~~a~~asD~ 678 (978)
..... -+....| ..|+..++.+.+..| +.|++|||+.||.+|++.|++||+|.+. ....+..||+
T Consensus 178 ---~~~~~~~~s~~~~~ei~~~~~~K~~~l~~l~~~~gi~~~e~i~~GD~~NDi~m~~~ag~~vamgna-~~~lk~~Ad~ 253 (272)
T PRK10530 178 ---ELGLECEWSWHDQVDIARKGNSKGKRLTQWVEAQGWSMKNVVAFGDNFNDISMLEAAGLGVAMGNA-DDAVKARADL 253 (272)
T ss_pred ---hcCceEEEecCceEEEecCCCChHHHHHHHHHHcCCCHHHeEEeCCChhhHHHHHhcCceEEecCc-hHHHHHhCCE
Confidence 11100 1223333 369988887765544 5799999999999999999999999654 3447889999
Q ss_pred ehhc
Q 002029 679 AIAQ 682 (978)
Q Consensus 679 vi~~ 682 (978)
+..+
T Consensus 254 v~~~ 257 (272)
T PRK10530 254 VIGD 257 (272)
T ss_pred EEec
Confidence 8865
No 53
>TIGR01486 HAD-SF-IIB-MPGP mannosyl-3-phosphoglycerate phosphatase family. This small group of proteins is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. Several members of this family from thermophiles (and from Dehalococcoides ethenogenes) are now known to act as mannosyl-3-phosphoglycerate (MPG) phosphatase. In these cases, the enzyme acts after MPG synthase to make the compatible solute mannosylglycerate. We propose that other mesophilic members of this family do not act as mannosyl-3-phosphoglycerate phosphatase. A member of this family is found in Escherichia coli, which appears to lack MPG synthase. Mannosylglycerate is imported in E. coli by phosphoenolpyruvate-dependent transporter (PubMed:14645248), but it appears the phosphorylation is not on the glycerate moiety, that the phosphorylated import is degraded by an alpha-mannosidase from an adjacent gene, and that E. coli would have no pathway to obta
Probab=98.45 E-value=1.4e-06 Score=93.96 Aligned_cols=188 Identities=12% Similarity=0.111 Sum_probs=99.5
Q ss_pred cCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCc----cccCceEEEEecCCC-------cccccchhhhHHHHH
Q 002029 490 LQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSL----LRQGMRQVIISSETP-------ESKTLEKSEDKSAAA 558 (978)
Q Consensus 490 lr~~v~~~I~~L~~aGIkv~mlTGD~~~tA~~ia~~~gl----~~~~~~~i~i~~~~~-------~~~~~~~~~~~~~~~ 558 (978)
..+.+.++|++|+++|+++.++||+....+..+.+++|+ +..++..+....... ....++.+...+.++
T Consensus 17 ~~~~~~~~i~~l~~~g~~~~~~TgR~~~~~~~~~~~~~~~~~~I~~NGa~i~~~~~~~~~~~~~~~~~~i~~~~~~~il~ 96 (256)
T TIGR01486 17 DWGPAKEVLERLQELGIPVIPCTSKTAAEVEYLRKELGLEDPFIVENGGAIYGPRGWFTEPEYPVIALGIPYEKIRARLE 96 (256)
T ss_pred CchHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCCCCcEEEcCCeEEEeCCCcccCCCeEEEEcCCCHHHHHHHHH
Confidence 445689999999999999999999999999999999886 445555554332211 112233333333333
Q ss_pred HHHHH-HHHHHHHh-----------h--hhhhccccCCCCCeEEEEcCchhhhhchhhHHHHHHHHHhc-cCeeEEEeCC
Q 002029 559 AALKA-SVLHQLIR-----------G--KELLDSSNESLGPLALIIDGKSLTYALEDDVKDLFLELAIG-CASVICCRSS 623 (978)
Q Consensus 559 ~~~~~-~~~~~~~~-----------~--~~~~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~f~~l~~~-~~~vi~~r~s 623 (978)
..... ........ . ...............++. ..+.. +.+...+...... ..+..+..+.
T Consensus 97 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~----~~~~~~~~~~~~~~~~s~~~~ei~ 171 (256)
T TIGR01486 97 ELSEELGFKFRGLGDLTDAEIAELTGLSRELAALAQRREYSETILW-SEERR----ERFTEALVELGLEVTHGNRFYHVL 171 (256)
T ss_pred HHHHHhCCCccchhhCCHHHHHHHhCcCHHHHHHHhhCccCCceec-ChHHH----HHHHHHHHHcCCEEEeCCceEEEe
Confidence 22111 00000000 0 000000000011111122 21111 1122222211000 0001233344
Q ss_pred ch--hHHHHHHHHHccC-----CCeEEEEcCCcCCHHHhhhccccccccCCcc--chhccc--c-ceehhc
Q 002029 624 PK--QKALVTRLVKTKT-----SSTTLAIGDGANDVGMLQEADIGVGISGVEG--MQAVMS--S-DIAIAQ 682 (978)
Q Consensus 624 P~--qK~~iV~~lk~~~-----~~~v~aiGDG~ND~~ml~~AdvGI~i~g~e~--~~a~~a--s-D~vi~~ 682 (978)
|. .|+..++.+.+.. ...|+++||+.||.+|++.|++||+|.+... ...+.. | +++...
T Consensus 172 ~~~~~Kg~ai~~l~~~~~i~~~~~~~~a~GD~~ND~~Ml~~ag~~vam~Na~~~~~~lk~~~~a~~~vt~~ 242 (256)
T TIGR01486 172 GAGSDKGKAANALKQFYNQPGGAIKVVGLGDSPNDLPLLEVVDLAVVVPGPNGPNVSLKPGDPGSFLLTPA 242 (256)
T ss_pred cCCCCHHHHHHHHHHHHhhcCCCceEEEEcCCHhhHHHHHHCCEEEEeCCCCCCccccCccCCCcEEEcCC
Confidence 43 6888888776653 4679999999999999999999999977642 235554 3 465543
No 54
>TIGR00099 Cof-subfamily Cof subfamily of IIB subfamily of haloacid dehalogenase superfamily. The members of this subfamily are restricted almost exclusively to bacteria (one sequences from S. pombe scores above trusted, while another is between trusted and noise). It is notable that no archaea are found in this group, the closest relations to the archaea found here being two Deinococcus sequences.
Probab=98.39 E-value=4.5e-07 Score=97.96 Aligned_cols=190 Identities=19% Similarity=0.161 Sum_probs=103.8
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCc----cccCceEEEEec-CCCcccccchhhhHHHHHHHHHH
Q 002029 489 KLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSL----LRQGMRQVIISS-ETPESKTLEKSEDKSAAAAALKA 563 (978)
Q Consensus 489 ~lr~~v~~~I~~L~~aGIkv~mlTGD~~~tA~~ia~~~gl----~~~~~~~i~i~~-~~~~~~~~~~~~~~~~~~~~~~~ 563 (978)
++.+++.++|++|++.|+++.++||+....+..+..++++ +..++..+.... .......++.+...+.+......
T Consensus 16 ~i~~~~~~~i~~l~~~G~~~~iaTGR~~~~~~~~~~~~~~~~~~I~~NGa~i~~~~~~~i~~~~i~~~~~~~i~~~~~~~ 95 (256)
T TIGR00099 16 TISPSTKEALAKLREKGIKVVLATGRPYKEVKNILKELGLDTPFITANGAAVIDDQGEILYKKPLDLDLVEEILNFLKKH 95 (256)
T ss_pred ccCHHHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCCCCCEEEcCCcEEECCCCCEEeecCCCHHHHHHHHHHHHHc
Confidence 4778999999999999999999999999999999988875 334444443321 11222333433333333322211
Q ss_pred HHHHHHHhhhh-hhccc------------cC------------CCCCeEEEEcCchhhhhchhhHHHHHHH--HHhccC-
Q 002029 564 SVLHQLIRGKE-LLDSS------------NE------------SLGPLALIIDGKSLTYALEDDVKDLFLE--LAIGCA- 615 (978)
Q Consensus 564 ~~~~~~~~~~~-~~~~~------------~~------------~~~~~~lvi~G~~l~~~~~~~~~~~f~~--l~~~~~- 615 (978)
.....+..... ..... .. ......+.+.++.-. .+++...+.. ......
T Consensus 96 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~ 172 (256)
T TIGR00099 96 GLDVILYGDDSIYASKNDPEYFTIFKKFLGEPKLEVVDIQYLPDDILKILLLFLDPED---LDLLIEALNKLELEENVSV 172 (256)
T ss_pred CcEEEEEeCCeEEecCCCcchhHHHHHhccCCcceeccchhhhcccceEEEEECCHHH---HHHHHHHhhhhhhcCCEEE
Confidence 11000000000 00000 00 000001111111000 0111122211 000011
Q ss_pred ---eeEEEeCCch--hHHHHHHHHHccCC---CeEEEEcCCcCCHHHhhhccccccccCCccchhccccceehhc
Q 002029 616 ---SVICCRSSPK--QKALVTRLVKTKTS---STTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDIAIAQ 682 (978)
Q Consensus 616 ---~vi~~r~sP~--qK~~iV~~lk~~~~---~~v~aiGDG~ND~~ml~~AdvGI~i~g~e~~~a~~asD~vi~~ 682 (978)
..-+..+.|. .|+..++.+.+..+ ..++++||+.||++|++.|++|++|.+.. ..++..||++..+
T Consensus 173 ~~s~~~~leI~~~~~~K~~~i~~~~~~~~~~~~~~~~~GD~~nD~~m~~~~~~~~a~~na~-~~~k~~a~~~~~~ 246 (256)
T TIGR00099 173 VSSGPYSIEITAKGVSKGSALQSLAEALGISLEDVIAFGDGMNDIEMLEAAGYGVAMGNAD-EELKALADYVTDS 246 (256)
T ss_pred EEecCceEEecCCCCChHHHHHHHHHHcCCCHHHEEEeCCcHHhHHHHHhCCceeEecCch-HHHHHhCCEEecC
Confidence 0113345554 69999998887544 67999999999999999999999996543 3478889998765
No 55
>TIGR00338 serB phosphoserine phosphatase SerB. Phosphoserine phosphatase catalyzes the reaction 3-phospho-serine + H2O = L-serine + phosphate. It catalyzes the last of three steps in the biosynthesis of serine from D-3-phosphoglycerate. Note that this enzyme acts on free phosphoserine, not on phosphoserine residues of phosphoproteins.
Probab=98.38 E-value=9.3e-07 Score=93.08 Aligned_cols=123 Identities=22% Similarity=0.281 Sum_probs=86.7
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCccccCceEEEEecCCCcccccchhhhHHHHHHHHHHHHHHH
Q 002029 489 KLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQGMRQVIISSETPESKTLEKSEDKSAAAAALKASVLHQ 568 (978)
Q Consensus 489 ~lr~~v~~~I~~L~~aGIkv~mlTGD~~~tA~~ia~~~gl~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 568 (978)
++.+++++.++.|++.|+++.++||.....+..+.+.+|+..--...+..+..
T Consensus 85 ~~~~g~~~~l~~l~~~g~~~~IvS~~~~~~~~~~l~~~~i~~~~~~~~~~~~~--------------------------- 137 (219)
T TIGR00338 85 PLTEGAEELVKTLKEKGYKVAVISGGFDLFAEHVKDKLGLDAAFANRLEVEDG--------------------------- 137 (219)
T ss_pred CcCCCHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHcCCCceEeeEEEEECC---------------------------
Confidence 68999999999999999999999999999999999998884311111111100
Q ss_pred HHhhhhhhccccCCCCCeEEEEcCchhhhhchhhHHHHHHHHHhccCeeEEEe-CCchhHHHHHHHHHccCC---CeEEE
Q 002029 569 LIRGKELLDSSNESLGPLALIIDGKSLTYALEDDVKDLFLELAIGCASVICCR-SSPKQKALVTRLVKTKTS---STTLA 644 (978)
Q Consensus 569 ~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~f~~l~~~~~~vi~~r-~sP~qK~~iV~~lk~~~~---~~v~a 644 (978)
.++|. +.++ ..+..|..+++.+.+..+ ..+++
T Consensus 138 --------------------~~~~~------------------------~~~~~~~~~~k~~~~~~~~~~~~~~~~~~i~ 173 (219)
T TIGR00338 138 --------------------KLTGL------------------------VEGPIVDASYKGKTLLILLRKEGISPENTVA 173 (219)
T ss_pred --------------------EEEEE------------------------ecCcccCCcccHHHHHHHHHHcCCCHHHEEE
Confidence 00000 1111 112346666665544333 56899
Q ss_pred EcCCcCCHHHhhhccccccccCCccchhccccceehhchh
Q 002029 645 IGDGANDVGMLQEADIGVGISGVEGMQAVMSSDIAIAQFR 684 (978)
Q Consensus 645 iGDG~ND~~ml~~AdvGI~i~g~e~~~a~~asD~vi~~f~ 684 (978)
|||+.+|++|.+.|++++++.+.+. +..+||+++.+.+
T Consensus 174 iGDs~~Di~aa~~ag~~i~~~~~~~--~~~~a~~~i~~~~ 211 (219)
T TIGR00338 174 VGDGANDLSMIKAAGLGIAFNAKPK--LQQKADICINKKD 211 (219)
T ss_pred EECCHHHHHHHHhCCCeEEeCCCHH--HHHhchhccCCCC
Confidence 9999999999999999999977654 6678999988754
No 56
>KOG1615 consensus Phosphoserine phosphatase [Amino acid transport and metabolism]
Probab=98.32 E-value=1.6e-06 Score=84.23 Aligned_cols=129 Identities=17% Similarity=0.278 Sum_probs=86.7
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCccccCce--EEEEecCCCcccccchhhhHHHHHHHHHHHHH
Q 002029 489 KLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQGMR--QVIISSETPESKTLEKSEDKSAAAAALKASVL 566 (978)
Q Consensus 489 ~lr~~v~~~I~~L~~aGIkv~mlTGD~~~tA~~ia~~~gl~~~~~~--~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 566 (978)
.+-+|+++....|++.|.++.++||--..-+..+|.++||...+.. .+.++.....
T Consensus 88 ~lT~Gi~eLv~~L~~~~~~v~liSGGF~~~i~~Va~~Lgi~~~n~yAN~l~fd~~Gk~---------------------- 145 (227)
T KOG1615|consen 88 TLTPGIRELVSRLHARGTQVYLISGGFRQLIEPVAEQLGIPKSNIYANELLFDKDGKY---------------------- 145 (227)
T ss_pred ccCCCHHHHHHHHHHcCCeEEEEcCChHHHHHHHHHHhCCcHhhhhhheeeeccCCcc----------------------
Confidence 3679999999999999999999999999999999999999653321 1111111000
Q ss_pred HHHHhhhhhhccccCCCCCeEEEEcCchhhhhchhhHHHHHHHHHhccCeeEEEeCCchhHHHHHHHHHcc-CCCeEEEE
Q 002029 567 HQLIRGKELLDSSNESLGPLALIIDGKSLTYALEDDVKDLFLELAIGCASVICCRSSPKQKALVTRLVKTK-TSSTTLAI 645 (978)
Q Consensus 567 ~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~f~~l~~~~~~vi~~r~sP~qK~~iV~~lk~~-~~~~v~ai 645 (978)
..++... .-+...-|+.+++.+++. ..+.++||
T Consensus 146 -----------------------~gfd~~~-----------------------ptsdsggKa~~i~~lrk~~~~~~~~mv 179 (227)
T KOG1615|consen 146 -----------------------LGFDTNE-----------------------PTSDSGGKAEVIALLRKNYNYKTIVMV 179 (227)
T ss_pred -----------------------cccccCC-----------------------ccccCCccHHHHHHHHhCCChheeEEe
Confidence 0000000 001234799999999874 34789999
Q ss_pred cCCcCCHHHhhhccccccccCCccch-hccccceehhchhh
Q 002029 646 GDGANDVGMLQEADIGVGISGVEGMQ-AVMSSDIAIAQFRF 685 (978)
Q Consensus 646 GDG~ND~~ml~~AdvGI~i~g~e~~~-a~~asD~vi~~f~~ 685 (978)
|||+||.+|+..||.=||..|.-..+ .+..++..+.+|..
T Consensus 180 GDGatDlea~~pa~afi~~~g~~~r~~vk~nak~~~~~f~~ 220 (227)
T KOG1615|consen 180 GDGATDLEAMPPADAFIGFGGNVIREGVKANAKWYVTDFYV 220 (227)
T ss_pred cCCccccccCCchhhhhccCCceEcHhhHhccHHHHHHHHH
Confidence 99999999999988777665543221 33455555555443
No 57
>KOG4383 consensus Uncharacterized conserved protein [Function unknown]
Probab=98.29 E-value=2.3e-05 Score=88.54 Aligned_cols=280 Identities=13% Similarity=0.169 Sum_probs=168.6
Q ss_pred HHhhcccEEEEEEeeccccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCccccCceEEEEecCC-Ccccccch
Q 002029 472 EKIEKNLILLGATAVEDKLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQGMRQVIISSET-PESKTLEK 550 (978)
Q Consensus 472 ~~ie~dl~llG~i~ieD~lr~~v~~~I~~L~~aGIkv~mlTGD~~~tA~~ia~~~gl~~~~~~~i~i~~~~-~~~~~~~~ 550 (978)
++.-.+-.|.|++...-+.+.+....|+.|-++-|+.+..+-.+.....-.|.++||-.....-+.+..+. ....+...
T Consensus 809 ~Qa~sGQIf~GlVs~~Yea~ldiVriIdgL~naCiRfVYFS~EdELkSkVFAEKlGiEaGWNCHISLa~~~d~Pg~e~~p 888 (1354)
T KOG4383|consen 809 DQAFSGQIFCGLVSLHYEAILDIVRIIDGLDNACIRFVYFSKEDELKSKVFAEKLGIEAGWNCHISLAEEEDAPGREAGP 888 (1354)
T ss_pred HHHhccchhhhhhhhhccchhhHHHHHHHhhhhheeeeeecchHHHHHHHHHHHhccccccceeEEeccCCCCCcccCCC
Confidence 33446778999999999999999999999999999999999999999999999999976654444444332 11111110
Q ss_pred --hh-------hHHHHHHHHHHH---HHHHHHhhhhhhccccC---------CCCCeEEEEcCchhhhhchhhHHHHHHH
Q 002029 551 --SE-------DKSAAAAALKAS---VLHQLIRGKELLDSSNE---------SLGPLALIIDGKSLTYALEDDVKDLFLE 609 (978)
Q Consensus 551 --~~-------~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~---------~~~~~~lvi~G~~l~~~~~~~~~~~f~~ 609 (978)
+. ..+.+.+...++ ......++.....+-.. +..+.+-.-.|- ...+.|+.+
T Consensus 889 a~~q~a~qkpSlhddlnqia~ddaeg~lL~~Eeg~~dliSfq~~dsdi~kf~ed~N~AkLPrGi-------hnVRPHL~~ 961 (1354)
T KOG4383|consen 889 AHEQFAAQKPSLHDDLNQIALDDAEGELLDCEEGARDLISFQKMDSDIAKFAEDPNIAKLPRGI-------HNVRPHLDE 961 (1354)
T ss_pred CChhhhccCcchhHHHHHhhhcccccceeehhhcccCCccccccccchhhhcCCCchhhcCcch-------hhcCccccc
Confidence 00 001111111000 00011111111000000 000000001110 011111111
Q ss_pred HH-hccCeeEEEeCCchhHHHHHHHHHccCCCeEEEEcCCcCC--HHHhhhccccccccCCccc----------------
Q 002029 610 LA-IGCASVICCRSSPKQKALVTRLVKTKTSSTTLAIGDGAND--VGMLQEADIGVGISGVEGM---------------- 670 (978)
Q Consensus 610 l~-~~~~~vi~~r~sP~qK~~iV~~lk~~~~~~v~aiGDG~ND--~~ml~~AdvGI~i~g~e~~---------------- 670 (978)
+- .-.-+-.|.+++|+.-.++++.+|+ .|++|+.+|..+|- .-.+-+|||+|++..-+..
T Consensus 962 iDNVPLLV~LFTDcnpeamcEMIeIMQE-~GEVtcclGS~aN~rNSciflkadISialD~l~~~~C~~e~fg~assisma 1040 (1354)
T KOG4383|consen 962 IDNVPLLVGLFTDCNPEAMCEMIEIMQE-NGEVTCCLGSCANARNSCIFLKADISIALDDLEEPACRLEDFGVASSISMA 1040 (1354)
T ss_pred ccCcceeeeeccCCCHHHHHHHHHHHHH-cCcEEEEeccccccccceEEEccceeEEeccCCCccceecccccchhhhhh
Confidence 10 0001237899999999999999999 89999999999984 4456789999987542211
Q ss_pred hh--------------ccccceehhchhh--hHHHHHHhhhhhhhHhhHhHHHHHHHHHHHHHHHHHHHHhhccccccch
Q 002029 671 QA--------------VMSSDIAIAQFRF--LERLLLVHGHWCYRRISSMICYFFYKNIAFGFTLFFFEAYASFSGQPVY 734 (978)
Q Consensus 671 ~a--------------~~asD~vi~~f~~--l~~lll~~gR~~~~~i~~~i~~~~~~n~~~~~~~~~~~~~~~~s~~~~~ 734 (978)
|| ..++|+-+.+-+. +.+| ++.+|.....+++.++|.++..+.++.++|+-.++. -.++|
T Consensus 1041 qandglsplQiSgqLnaL~c~~~f~~ee~ikiirL-Ie~ARHa~~g~R~cfLFiLq~qL~l~Vi~flSc~~~---LP~i~ 1116 (1354)
T KOG4383|consen 1041 QANDGLSPLQISGQLNALACDFRFDHEELIKIIRL-IECARHAMSGFRHCFLFILQAQLLLSVIIFLSCFFF---LPIIF 1116 (1354)
T ss_pred hhcCCCCceeecccccccccccchhHHHHHHHHHH-HHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHh---ccchh
Confidence 11 1122333222222 4455 788898888999999999999999988888776664 34457
Q ss_pred hhHHHHHHHHHHhhhhHhhhh-ccccCCChHH
Q 002029 735 NDWFLSLYNVFFTSLPVIALG-VFDQDVSARF 765 (978)
Q Consensus 735 ~~~~~~~~n~i~~~~p~~~l~-~~~~~~~~~~ 765 (978)
+-.+++|...+- +|.+.+| ++.+..+...
T Consensus 1117 s~sdii~lScfc--~PlL~i~tL~gk~~hkSi 1146 (1354)
T KOG4383|consen 1117 SHSDIILLSCFC--IPLLFIGTLFGKFEHKSI 1146 (1354)
T ss_pred ccchHHHHHHHH--HHHHHHHHHhcCCCccce
Confidence 777888877664 7888888 5555444433
No 58
>TIGR02461 osmo_MPG_phos mannosyl-3-phosphoglycerate phosphatase. Members of this family are mannosyl-3-phosphoglycerate phosphatase (EC 3.1.3.70). It acts sequentially after mannosyl-3-phosphoglycerate synthase (EC 2.4.1.217) in a two-step pathway of biosynthesis of the compatible solute mannosylglycerate, a typical osmolyte of thermophiles.
Probab=98.25 E-value=3.5e-06 Score=88.72 Aligned_cols=52 Identities=8% Similarity=0.089 Sum_probs=42.9
Q ss_pred ccccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCc----cccCceEEEE
Q 002029 487 EDKLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSL----LRQGMRQVII 538 (978)
Q Consensus 487 eD~lr~~v~~~I~~L~~aGIkv~mlTGD~~~tA~~ia~~~gl----~~~~~~~i~i 538 (978)
.+..-+++.++|++|+++|++++++||+....+..+..++|+ +..|+..+..
T Consensus 13 ~~~~~~~~~~ai~~l~~~G~~~vi~TgR~~~~~~~~~~~lg~~~~~I~~NGa~I~~ 68 (225)
T TIGR02461 13 PGYEPGPAREALEELKDLGFPIVFVSSKTRAEQEYYREELGVEPPFIVENGGAIFI 68 (225)
T ss_pred CCCCchHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCCCcEEEcCCcEEEe
Confidence 355666799999999999999999999999999999999985 3455555544
No 59
>TIGR01670 YrbI-phosphatas 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family. The Methanosarcina sequence is distinctive in that it is linked to an N-terminal cytidylyltransferase domain (pfam02348) and is annotated as acylneuraminate cytidylyltransferase. This may give some clue as the function of these phosphatases. Several eukaryotic sequences scoring between trusted and noise are also closely related to this function such as the CMP-N-acetylneuraminic acid synthetase from mouse, but in these cases the phosphatase domain is clearly inactive as many of the active site residues are not conserved.
Probab=98.24 E-value=4.9e-06 Score=82.14 Aligned_cols=96 Identities=15% Similarity=0.159 Sum_probs=71.7
Q ss_pred HHHHHHHcCCeEEEEcCCChhhHHHHHHHcCccccCceEEEEecCCCcccccchhhhHHHHHHHHHHHHHHHHHhhhhhh
Q 002029 497 CIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQGMRQVIISSETPESKTLEKSEDKSAAAAALKASVLHQLIRGKELL 576 (978)
Q Consensus 497 ~I~~L~~aGIkv~mlTGD~~~tA~~ia~~~gl~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 576 (978)
+|+.|++.|+++.++||+....+..+.+..|+-.-
T Consensus 36 ~i~~Lk~~G~~i~IvTn~~~~~~~~~l~~~gi~~~--------------------------------------------- 70 (154)
T TIGR01670 36 GIRCALKSGIEVAIITGRKAKLVEDRCKTLGITHL--------------------------------------------- 70 (154)
T ss_pred HHHHHHHCCCEEEEEECCCCHHHHHHHHHcCCCEE---------------------------------------------
Confidence 99999999999999999999999999999887310
Q ss_pred ccccCCCCCeEEEEcCchhhhhchhhHHHHHHHHHhccCeeEEEeCCchhHHHHHHHHHcc---CCCeEEEEcCCcCCHH
Q 002029 577 DSSNESLGPLALIIDGKSLTYALEDDVKDLFLELAIGCASVICCRSSPKQKALVTRLVKTK---TSSTTLAIGDGANDVG 653 (978)
Q Consensus 577 ~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~f~~l~~~~~~vi~~r~sP~qK~~iV~~lk~~---~~~~v~aiGDG~ND~~ 653 (978)
+.. ...|...++.+.+. ..+.++++||+.||.+
T Consensus 71 ------------------------------------------~~~--~~~k~~~~~~~~~~~~~~~~~~~~vGDs~~D~~ 106 (154)
T TIGR01670 71 ------------------------------------------YQG--QSNKLIAFSDILEKLALAPENVAYIGDDLIDWP 106 (154)
T ss_pred ------------------------------------------Eec--ccchHHHHHHHHHHcCCCHHHEEEECCCHHHHH
Confidence 000 01233333333222 3367999999999999
Q ss_pred HhhhccccccccCCccchhccccceehhc
Q 002029 654 MLQEADIGVGISGVEGMQAVMSSDIAIAQ 682 (978)
Q Consensus 654 ml~~AdvGI~i~g~e~~~a~~asD~vi~~ 682 (978)
|++.|++++++..... ..+..+|+++..
T Consensus 107 ~~~~ag~~~~v~~~~~-~~~~~a~~i~~~ 134 (154)
T TIGR01670 107 VMEKVGLSVAVADAHP-LLIPRADYVTRI 134 (154)
T ss_pred HHHHCCCeEecCCcCH-HHHHhCCEEecC
Confidence 9999999999965543 267778988864
No 60
>PRK13582 thrH phosphoserine phosphatase; Provisional
Probab=98.21 E-value=8.6e-06 Score=84.73 Aligned_cols=126 Identities=20% Similarity=0.186 Sum_probs=87.3
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCccccCceEEEEecCCCcccccchhhhHHHHHHHHHHHHHHH
Q 002029 489 KLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQGMRQVIISSETPESKTLEKSEDKSAAAAALKASVLHQ 568 (978)
Q Consensus 489 ~lr~~v~~~I~~L~~aGIkv~mlTGD~~~tA~~ia~~~gl~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 568 (978)
++.||++++++.|+++ +++.++||.....+..+...+|+..--...+..+.+.
T Consensus 68 ~~~pg~~e~L~~L~~~-~~~~IvS~~~~~~~~~~l~~~gl~~~f~~~~~~~~~~-------------------------- 120 (205)
T PRK13582 68 DPLPGAVEFLDWLRER-FQVVILSDTFYEFAGPLMRQLGWPTLFCHSLEVDEDG-------------------------- 120 (205)
T ss_pred CCCCCHHHHHHHHHhc-CCEEEEeCCcHHHHHHHHHHcCCchhhcceEEECCCC--------------------------
Confidence 4689999999999999 9999999999999999999988732111111111100
Q ss_pred HHhhhhhhccccCCCCCeEEEEcCchhhhhchhhHHHHHHHHHhccCeeEEEeCCchhHHHHHHHHHccCCCeEEEEcCC
Q 002029 569 LIRGKELLDSSNESLGPLALIIDGKSLTYALEDDVKDLFLELAIGCASVICCRSSPKQKALVTRLVKTKTSSTTLAIGDG 648 (978)
Q Consensus 569 ~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~f~~l~~~~~~vi~~r~sP~qK~~iV~~lk~~~~~~v~aiGDG 648 (978)
.+.|. . -..|..|...++.++. .+..++|||||
T Consensus 121 --------------------~i~~~------------------------~--~~~p~~k~~~l~~~~~-~~~~~v~iGDs 153 (205)
T PRK13582 121 --------------------MITGY------------------------D--LRQPDGKRQAVKALKS-LGYRVIAAGDS 153 (205)
T ss_pred --------------------eEECc------------------------c--ccccchHHHHHHHHHH-hCCeEEEEeCC
Confidence 00010 0 0136778888888776 67889999999
Q ss_pred cCCHHHhhhccccccccCCccchhccccce-ehhchhhhHHH
Q 002029 649 ANDVGMLQEADIGVGISGVEGMQAVMSSDI-AIAQFRFLERL 689 (978)
Q Consensus 649 ~ND~~ml~~AdvGI~i~g~e~~~a~~asD~-vi~~f~~l~~l 689 (978)
.||.+|.++|++|+.....+.. ....++. ++.++..+..+
T Consensus 154 ~~D~~~~~aa~~~v~~~~~~~~-~~~~~~~~~~~~~~el~~~ 194 (205)
T PRK13582 154 YNDTTMLGEADAGILFRPPANV-IAEFPQFPAVHTYDELLAA 194 (205)
T ss_pred HHHHHHHHhCCCCEEECCCHHH-HHhCCcccccCCHHHHHHH
Confidence 9999999999999976554432 2234454 67777665544
No 61
>PRK00192 mannosyl-3-phosphoglycerate phosphatase; Reviewed
Probab=98.18 E-value=1.2e-05 Score=87.79 Aligned_cols=50 Identities=14% Similarity=0.061 Sum_probs=41.3
Q ss_pred ccEEEEEEeeccccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCcc
Q 002029 477 NLILLGATAVEDKLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLL 529 (978)
Q Consensus 477 dl~llG~i~ieD~lr~~v~~~I~~L~~aGIkv~mlTGD~~~tA~~ia~~~gl~ 529 (978)
|.||+.- ...+.+++.++|+.|++.|++++++||+....+..+.+++|+.
T Consensus 12 DGTLl~~---~~~~~~~~~~ai~~l~~~Gi~~~iaTgR~~~~~~~~~~~l~l~ 61 (273)
T PRK00192 12 DGTLLDH---HTYSYEPAKPALKALKEKGIPVIPCTSKTAAEVEVLRKELGLE 61 (273)
T ss_pred cccCcCC---CCcCcHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCC
Confidence 4455531 3346677999999999999999999999999999999999863
No 62
>TIGR01491 HAD-SF-IB-PSPlk HAD-superfamily, subfamily-IB PSPase-like hydrolase, archaeal. This hypothetical equivalog is a member of the IB subfamily (TIGR01488) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this alignment are all from archaeal species. The phylogenetically closest group of sequences to these are phosphoserine phosphatases (TIGR00338). There are no known archaeal phosphoserine phosphatases, and no archaea fall within TIGR00338. It is likely, then, that This model represents the archaeal branch of the PSPase equivalog.
Probab=98.16 E-value=7.7e-06 Score=84.73 Aligned_cols=118 Identities=19% Similarity=0.230 Sum_probs=80.7
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCccccCceEEEEecCCCcccccchhhhHHHHHHHHHHHHHHH
Q 002029 489 KLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQGMRQVIISSETPESKTLEKSEDKSAAAAALKASVLHQ 568 (978)
Q Consensus 489 ~lr~~v~~~I~~L~~aGIkv~mlTGD~~~tA~~ia~~~gl~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 568 (978)
++++++.++++.|++.|+++.++||-....+..+++..|+..--...+..+...
T Consensus 80 ~~~~g~~e~l~~l~~~g~~~~IvS~~~~~~~~~~l~~~g~~~~~~~~~~~~~~g-------------------------- 133 (201)
T TIGR01491 80 SLRDYAEELVRWLKEKGLKTAIVSGGIMCLAKKVAEKLNPDYVYSNELVFDEKG-------------------------- 133 (201)
T ss_pred CCCccHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHhCCCeEEEEEEEEcCCC--------------------------
Confidence 589999999999999999999999999999999999998632111111111000
Q ss_pred HHhhhhhhccccCCCCCeEEEEcCchhhhhchhhHHHHHHHHHhccCeeEEEeCCchhHHHHHHHHHccC---CCeEEEE
Q 002029 569 LIRGKELLDSSNESLGPLALIIDGKSLTYALEDDVKDLFLELAIGCASVICCRSSPKQKALVTRLVKTKT---SSTTLAI 645 (978)
Q Consensus 569 ~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~f~~l~~~~~~vi~~r~sP~qK~~iV~~lk~~~---~~~v~ai 645 (978)
...+ ..+....|..|..+++.+.+.. ...++++
T Consensus 134 --------------------~~~p------------------------~~~~~~~~~~k~~~~~~~~~~~~~~~~~~i~i 169 (201)
T TIGR01491 134 --------------------FIQP------------------------DGIVRVTFDNKGEAVERLKRELNPSLTETVAV 169 (201)
T ss_pred --------------------eEec------------------------ceeeEEccccHHHHHHHHHHHhCCCHHHEEEE
Confidence 0000 0122234667877777665432 3569999
Q ss_pred cCCcCCHHHhhhccccccccCCccchhccccc
Q 002029 646 GDGANDVGMLQEADIGVGISGVEGMQAVMSSD 677 (978)
Q Consensus 646 GDG~ND~~ml~~AdvGI~i~g~e~~~a~~asD 677 (978)
||+.||.+|++.|++++++.+... ....|+|
T Consensus 170 GDs~~D~~~a~~ag~~~a~~~~~~-~~~~a~~ 200 (201)
T TIGR01491 170 GDSKNDLPMFEVADISISLGDEGH-ADYLAKD 200 (201)
T ss_pred cCCHhHHHHHHhcCCeEEECCCcc-chhhccc
Confidence 999999999999999999854332 2444554
No 63
>PF12710 HAD: haloacid dehalogenase-like hydrolase; PDB: 3P96_A 3N28_A 3FVV_A 1RKU_A 1RKV_A 1Y8A_A 2FEA_B 3KD3_B.
Probab=98.14 E-value=7.5e-06 Score=84.09 Aligned_cols=39 Identities=23% Similarity=0.232 Sum_probs=35.8
Q ss_pred CChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCccc
Q 002029 492 NGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLR 530 (978)
Q Consensus 492 ~~v~~~I~~L~~aGIkv~mlTGD~~~tA~~ia~~~gl~~ 530 (978)
+++++.|+.++++|++++++||+....+..+++.+|+..
T Consensus 92 ~~~~e~i~~~~~~~~~v~IvS~~~~~~i~~~~~~~~i~~ 130 (192)
T PF12710_consen 92 PDAMELIRELKDNGIKVVIVSGSPDEIIEPIAERLGIDD 130 (192)
T ss_dssp TTHHHHHHHHHHTTSEEEEEEEEEHHHHHHHHHHTTSSE
T ss_pred hhHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHcCCCc
Confidence 555699999999999999999999999999999999854
No 64
>TIGR02726 phenyl_P_delta phenylphosphate carboxylase, delta subunit. Members of this protein family are the alpha subunit of phenylphosphate carboxylase. Phenol (methyl-benzene) is converted to phenylphosphate, then para-carboxylated by this four-subunit enzyme, with the release of phosphate, to 4-hydroxybenzoate. The enzyme contains neither biotin nor thiamin pyrophosphate. This delta subunit belongs to HAD family hydrolases.
Probab=98.11 E-value=7.6e-06 Score=81.50 Aligned_cols=98 Identities=12% Similarity=0.143 Sum_probs=72.9
Q ss_pred HHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCccccCceEEEEecCCCcccccchhhhHHHHHHHHHHHHHHHHHhhhhh
Q 002029 496 ECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQGMRQVIISSETPESKTLEKSEDKSAAAAALKASVLHQLIRGKEL 575 (978)
Q Consensus 496 ~~I~~L~~aGIkv~mlTGD~~~tA~~ia~~~gl~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 575 (978)
..|+.|+++|+++.++|+.....+..+...+|+..
T Consensus 41 ~~~~~L~~~Gi~laIiT~k~~~~~~~~l~~lgi~~--------------------------------------------- 75 (169)
T TIGR02726 41 MGVIVLQLCGIDVAIITSKKSGAVRHRAEELKIKR--------------------------------------------- 75 (169)
T ss_pred HHHHHHHHCCCEEEEEECCCcHHHHHHHHHCCCcE---------------------------------------------
Confidence 58999999999999999999999999999999831
Q ss_pred hccccCCCCCeEEEEcCchhhhhchhhHHHHHHHHHhccCeeEEEeCC--chhHHHHHHHHHccCCCeEEEEcCCcCCHH
Q 002029 576 LDSSNESLGPLALIIDGKSLTYALEDDVKDLFLELAIGCASVICCRSS--PKQKALVTRLVKTKTSSTTLAIGDGANDVG 653 (978)
Q Consensus 576 ~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~f~~l~~~~~~vi~~r~s--P~qK~~iV~~lk~~~~~~v~aiGDG~ND~~ 653 (978)
.|.... |+--..+++.+.- ....+++|||+.||.+
T Consensus 76 ------------------------------------------~f~~~kpkp~~~~~~~~~l~~-~~~ev~~iGD~~nDi~ 112 (169)
T TIGR02726 76 ------------------------------------------FHEGIKKKTEPYAQMLEEMNI-SDAEVCYVGDDLVDLS 112 (169)
T ss_pred ------------------------------------------EEecCCCCHHHHHHHHHHcCc-CHHHEEEECCCHHHHH
Confidence 111111 2212222222221 3367999999999999
Q ss_pred HhhhccccccccCCccchhccccceehhc
Q 002029 654 MLQEADIGVGISGVEGMQAVMSSDIAIAQ 682 (978)
Q Consensus 654 ml~~AdvGI~i~g~e~~~a~~asD~vi~~ 682 (978)
|++.|++++++.+... +++..|+++...
T Consensus 113 ~~~~ag~~~am~nA~~-~lk~~A~~I~~~ 140 (169)
T TIGR02726 113 MMKRVGLAVAVGDAVA-DVKEAAAYVTTA 140 (169)
T ss_pred HHHHCCCeEECcCchH-HHHHhCCEEcCC
Confidence 9999999999976653 378889998763
No 65
>TIGR02471 sucr_syn_bact_C sucrose phosphate synthase, sucrose phosphatase-like domain, bacterial. Sucrose phosphate synthase (SPS) and sucrose phosphate phosphatase (SPP) are the last two enzymes of sucrose biosynthesis. In cyanobacteria and plants, the C-terminal region of most or all versions of SPS has a domain homologous to the known SPP. This domain may serve a binding or regulatory rather than catalytic function. Sequences in this family are bacterial C-terminal regions found in all but two of the putative bacterial sucrose phosphate synthases described by TIGR02472.
Probab=98.10 E-value=9e-06 Score=86.66 Aligned_cols=56 Identities=23% Similarity=0.262 Sum_probs=45.6
Q ss_pred eCCch--hHHHHHHHHHccCC---CeEEEEcCCcCCHHHhhhccccccccCCccchhccccc
Q 002029 621 RSSPK--QKALVTRLVKTKTS---STTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSD 677 (978)
Q Consensus 621 r~sP~--qK~~iV~~lk~~~~---~~v~aiGDG~ND~~ml~~AdvGI~i~g~e~~~a~~asD 677 (978)
.+.|. .|...++.+.++.+ ..++++||+.||.+|++.|+.||+|.+.... .+..||
T Consensus 152 ei~~~~~~K~~al~~l~~~~g~~~~~~i~~GD~~nD~~ml~~~~~~iav~na~~~-~k~~a~ 212 (236)
T TIGR02471 152 DVLPLRASKGLALRYLSYRWGLPLEQILVAGDSGNDEEMLRGLTLGVVVGNHDPE-LEGLRH 212 (236)
T ss_pred EEeeCCCChHHHHHHHHHHhCCCHHHEEEEcCCccHHHHHcCCCcEEEEcCCcHH-HHHhhc
Confidence 45554 79999999877544 4689999999999999999999999665443 778888
No 66
>PRK09484 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase; Provisional
Probab=98.09 E-value=9.6e-06 Score=82.54 Aligned_cols=111 Identities=18% Similarity=0.200 Sum_probs=78.4
Q ss_pred HHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCccccCceEEEEecCCCcccccchhhhHHHHHHHHHHHHHHHHHhhhhh
Q 002029 496 ECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQGMRQVIISSETPESKTLEKSEDKSAAAAALKASVLHQLIRGKEL 575 (978)
Q Consensus 496 ~~I~~L~~aGIkv~mlTGD~~~tA~~ia~~~gl~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 575 (978)
.+|+.|+++|+++.++||.....+..+++++|+..
T Consensus 55 ~~i~~L~~~Gi~v~I~T~~~~~~v~~~l~~lgl~~--------------------------------------------- 89 (183)
T PRK09484 55 YGIRCLLTSGIEVAIITGRKSKLVEDRMTTLGITH--------------------------------------------- 89 (183)
T ss_pred HHHHHHHHCCCEEEEEeCCCcHHHHHHHHHcCCce---------------------------------------------
Confidence 69999999999999999999999999999988731
Q ss_pred hccccCCCCCeEEEEcCchhhhhchhhHHHHHHHHHhccCeeEEEeCCchhHHHHHHHHHccC---CCeEEEEcCCcCCH
Q 002029 576 LDSSNESLGPLALIIDGKSLTYALEDDVKDLFLELAIGCASVICCRSSPKQKALVTRLVKTKT---SSTTLAIGDGANDV 652 (978)
Q Consensus 576 ~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~f~~l~~~~~~vi~~r~sP~qK~~iV~~lk~~~---~~~v~aiGDG~ND~ 652 (978)
+|. ..+.|...++.+.+.. ...|++|||+.||.
T Consensus 90 ------------------------------------------~f~--g~~~k~~~l~~~~~~~gl~~~ev~~VGDs~~D~ 125 (183)
T PRK09484 90 ------------------------------------------LYQ--GQSNKLIAFSDLLEKLAIAPEQVAYIGDDLIDW 125 (183)
T ss_pred ------------------------------------------eec--CCCcHHHHHHHHHHHhCCCHHHEEEECCCHHHH
Confidence 000 1122443333332223 36799999999999
Q ss_pred HHhhhccccccccCCccchhccccceehh------chhhhHHHH-HHhhhh
Q 002029 653 GMLQEADIGVGISGVEGMQAVMSSDIAIA------QFRFLERLL-LVHGHW 696 (978)
Q Consensus 653 ~ml~~AdvGI~i~g~e~~~a~~asD~vi~------~f~~l~~ll-l~~gR~ 696 (978)
+|++.|++++++...+ ..++..+|+++. ..+.+..++ ...|+|
T Consensus 126 ~~a~~aG~~~~v~~~~-~~~~~~a~~v~~~~~g~g~~~el~~~i~~~~~~~ 175 (183)
T PRK09484 126 PVMEKVGLSVAVADAH-PLLLPRADYVTRIAGGRGAVREVCDLLLLAQGKL 175 (183)
T ss_pred HHHHHCCCeEecCChh-HHHHHhCCEEecCCCCCCHHHHHHHHHHHhcCCh
Confidence 9999999999875433 235677899986 245555553 344554
No 67
>TIGR02463 MPGP_rel mannosyl-3-phosphoglycerate phosphatase-related protein. This family consists of members of the HAD superfamily, subfamily IIB. All members are closely related to mannosyl-3-phosphoglycerate phosphatase, the second enzyme in a two-step pathway for biosynthesis of mannosylglycerate, a compatible solute present in some thermophiles and in Dehalococcoides ethenogenes. However, members of this family are separable in a neighbor-joining tree constructed from a multiple sequence alignment and are found only in mesophiles that lack the companion mannosyl-3-phosphoglycerate synthase (TIGR02460). Members of this family are like to act on a compound related to yet distinct from mannosyl-3-phosphoglycerate.
Probab=98.08 E-value=2.2e-05 Score=82.81 Aligned_cols=36 Identities=19% Similarity=0.219 Sum_probs=34.1
Q ss_pred ChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCc
Q 002029 493 GVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSL 528 (978)
Q Consensus 493 ~v~~~I~~L~~aGIkv~mlTGD~~~tA~~ia~~~gl 528 (978)
.+.++|+.|+++||++.++||+....+..+.+.+++
T Consensus 20 ~~~~~l~~l~~~gi~~~i~TgR~~~~~~~~~~~l~~ 55 (221)
T TIGR02463 20 PAAPWLTRLQEAGIPVILCTSKTAAEVEYLQKALGL 55 (221)
T ss_pred HHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCC
Confidence 388999999999999999999999999999999986
No 68
>TIGR01485 SPP_plant-cyano sucrose-6F-phosphate phosphohydrolase. Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain.
Probab=98.05 E-value=2.2e-05 Score=84.29 Aligned_cols=176 Identities=13% Similarity=0.142 Sum_probs=93.6
Q ss_pred ccccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCcccc------CceEEEEecCCCcccccchhhhHHHHHHH
Q 002029 487 EDKLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQ------GMRQVIISSETPESKTLEKSEDKSAAAAA 560 (978)
Q Consensus 487 eD~lr~~v~~~I~~L~~aGIkv~mlTGD~~~tA~~ia~~~gl~~~------~~~~i~i~~~~~~~~~~~~~~~~~~~~~~ 560 (978)
..+..+.+.++|+++++.|++++++||+....+..+.++.++..+ ++..+..++.. .....-...+...
T Consensus 19 ~~~~~~~~~~~i~~~~~~gi~fv~aTGR~~~~~~~~~~~~~~~~p~~~I~~NGa~I~~~~~~-----~~~~~~~~~~~~~ 93 (249)
T TIGR01485 19 DNQALLRLNALLEDHRGEDSLLVYSTGRSPHSYKELQKQKPLLTPDIWVTSVGSEIYYGGAE-----VPDQHWAEYLSEK 93 (249)
T ss_pred ChHHHHHHHHHHHHhhccCceEEEEcCCCHHHHHHHHhcCCCCCCCEEEEcCCceEEeCCCC-----cCCHHHHHHHhcc
Confidence 355778999999999999999999999999999999998887544 33333322100 0000001111110
Q ss_pred HHHHHHHHHHhhhhhhccc---cCCCCCeEEEEcCchhhhhchhhHHHHHHHHHhccCeeEEE----eCCc--hhHHHHH
Q 002029 561 LKASVLHQLIRGKELLDSS---NESLGPLALIIDGKSLTYALEDDVKDLFLELAIGCASVICC----RSSP--KQKALVT 631 (978)
Q Consensus 561 ~~~~~~~~~~~~~~~~~~~---~~~~~~~~lvi~G~~l~~~~~~~~~~~f~~l~~~~~~vi~~----r~sP--~qK~~iV 631 (978)
...............+... ........+..+.+..... -.++.+.+......+..+... .+.| ..|+..+
T Consensus 94 ~~~~~~~~~~~~~~~l~~~~~~~~~~~k~~~~~~~~~~~~~-~~~l~~~l~~~~~~~~~~~~~~~~ldi~~~~~~K~~al 172 (249)
T TIGR01485 94 WQRDIVVAITDKFEELKPQPDLEQRPHKVSFFLDPEAAPEV-IKQLTEMLKETGLDVKLIYSSGKDLDILPQGSGKGQAL 172 (249)
T ss_pred cCHHHHHHHHhcCcccccCCccccCCeeEEEEechhhhhHH-HHHHHHHHHhcCCCEEEEEECCceEEEEeCCCChHHHH
Confidence 0000001111111111110 0111222222222111111 112222332221122222222 4455 3799999
Q ss_pred HHHHccCC---CeEEEEcCCcCCHHHhhh-ccccccccCCc
Q 002029 632 RLVKTKTS---STTLAIGDGANDVGMLQE-ADIGVGISGVE 668 (978)
Q Consensus 632 ~~lk~~~~---~~v~aiGDG~ND~~ml~~-AdvGI~i~g~e 668 (978)
+.+.+..| ..|+++||+.||.+|++. ++.||+|.+..
T Consensus 173 ~~l~~~~~i~~~~~i~~GD~~ND~~ml~~~~~~~va~~na~ 213 (249)
T TIGR01485 173 QYLLQKLAMEPSQTLVCGDSGNDIELFEIGSVRGVIVSNAQ 213 (249)
T ss_pred HHHHHHcCCCccCEEEEECChhHHHHHHccCCcEEEECCCH
Confidence 98876543 689999999999999998 67999996654
No 69
>PRK14502 bifunctional mannosyl-3-phosphoglycerate synthase/mannosyl-3 phosphoglycerate phosphatase; Provisional
Probab=98.02 E-value=4.4e-05 Score=89.99 Aligned_cols=49 Identities=8% Similarity=0.049 Sum_probs=40.6
Q ss_pred cCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCc----cccCceEEEE
Q 002029 490 LQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSL----LRQGMRQVII 538 (978)
Q Consensus 490 lr~~v~~~I~~L~~aGIkv~mlTGD~~~tA~~ia~~~gl----~~~~~~~i~i 538 (978)
.-+.+.++|+.|+++||++.+.||+....+..+++++++ +..|+..+..
T Consensus 434 i~~~t~eAL~~L~ekGI~~VIATGRs~~~i~~l~~~Lgl~~~~I~eNGA~I~~ 486 (694)
T PRK14502 434 SYSTALDALRLLKDKELPLVFCSAKTMGEQDLYRNELGIKDPFITENGGAIFI 486 (694)
T ss_pred cCHHHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHHcCCCCeEEEcCCCEEEE
Confidence 335679999999999999999999999999999999885 4556655554
No 70
>PRK08238 hypothetical protein; Validated
Probab=98.01 E-value=0.00096 Score=77.79 Aligned_cols=40 Identities=20% Similarity=0.156 Sum_probs=38.2
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCc
Q 002029 489 KLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSL 528 (978)
Q Consensus 489 ~lr~~v~~~I~~L~~aGIkv~mlTGD~~~tA~~ia~~~gl 528 (978)
|+++++.+.+++++++|++++++|+-....+..+++..|+
T Consensus 72 p~~pga~e~L~~lk~~G~~v~LaTas~~~~a~~i~~~lGl 111 (479)
T PRK08238 72 PYNEEVLDYLRAERAAGRKLVLATASDERLAQAVAAHLGL 111 (479)
T ss_pred CCChhHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCC
Confidence 4789999999999999999999999999999999999987
No 71
>PRK10187 trehalose-6-phosphate phosphatase; Provisional
Probab=97.99 E-value=0.00012 Score=79.27 Aligned_cols=183 Identities=13% Similarity=0.068 Sum_probs=97.1
Q ss_pred ccCCChHHHHHHHHH-cCCeEEEEcCCChhhHHHHHHHcC--ccccCceEEEEecCCCcccccchhhhHHHHHHHHHHHH
Q 002029 489 KLQNGVPECIDKLAQ-AGIKLWVLTGDKMETAINIGFACS--LLRQGMRQVIISSETPESKTLEKSEDKSAAAAALKASV 565 (978)
Q Consensus 489 ~lr~~v~~~I~~L~~-aGIkv~mlTGD~~~tA~~ia~~~g--l~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~ 565 (978)
.+-+++.++|++|++ .|++++++||+....+.......+ ++..++..+.-.........++.+.. +.+
T Consensus 36 ~i~~~~~~~L~~L~~~~g~~v~i~SGR~~~~~~~~~~~~~~~~i~~nGa~i~~~~~~~~~~~l~~~~~---------~~i 106 (266)
T PRK10187 36 VVPDNILQGLQLLATANDGALALISGRSMVELDALAKPYRFPLAGVHGAERRDINGKTHIVHLPDAIA---------RDI 106 (266)
T ss_pred cCCHHHHHHHHHHHhCCCCcEEEEeCCCHHHHHHhcCcccceEEEeCCCeeecCCCCeeeccCChhHH---------HHH
Confidence 355788999999998 899999999999999988887665 34444433321111101111111111 111
Q ss_pred HHHHHhhhhhhccccCCCCCeEEEEcCchhhhhchhhHHHHHHHHHhccC------eeEEEeCCch--hHHHHHHHHHcc
Q 002029 566 LHQLIRGKELLDSSNESLGPLALIIDGKSLTYALEDDVKDLFLELAIGCA------SVICCRSSPK--QKALVTRLVKTK 637 (978)
Q Consensus 566 ~~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~f~~l~~~~~------~vi~~r~sP~--qK~~iV~~lk~~ 637 (978)
...+...........-.....+++........ ..+.+......+..... .--+..+.|. +|+..++.+.+.
T Consensus 107 ~~~l~~~~~~~pg~~ve~k~~~~~~h~r~~~~-~~~~~~~l~~~i~~~~~~~~~~~g~~~lEi~p~g~~Kg~al~~ll~~ 185 (266)
T PRK10187 107 SVQLHTALAQLPGAELEAKGMAFALHYRQAPQ-HEDALLALAQRITQIWPQLALQPGKCVVEIKPRGTNKGEAIAAFMQE 185 (266)
T ss_pred HHHHHHHhccCCCcEEEeCCcEEEEECCCCCc-cHHHHHHHHHHHHhhCCceEEeCCCEEEEeeCCCCCHHHHHHHHHHh
Confidence 11111111000010001122233333322210 01112222222222222 1122344443 899988877654
Q ss_pred CC---CeEEEEcCCcCCHHHhhhc----cccccccCCccchhccccceehhchhhh
Q 002029 638 TS---STTLAIGDGANDVGMLQEA----DIGVGISGVEGMQAVMSSDIAIAQFRFL 686 (978)
Q Consensus 638 ~~---~~v~aiGDG~ND~~ml~~A----dvGI~i~g~e~~~a~~asD~vi~~f~~l 686 (978)
.+ ..++++||+.||.+|++.+ +.||+|... ...|++.+.+-..+
T Consensus 186 ~~~~~~~v~~~GD~~nD~~mf~~~~~~~g~~vavg~a-----~~~A~~~l~~~~~v 236 (266)
T PRK10187 186 APFAGRTPVFVGDDLTDEAGFAVVNRLGGISVKVGTG-----ATQASWRLAGVPDV 236 (266)
T ss_pred cCCCCCeEEEEcCCccHHHHHHHHHhcCCeEEEECCC-----CCcCeEeCCCHHHH
Confidence 43 6799999999999999999 888888543 34578888875443
No 72
>PRK12702 mannosyl-3-phosphoglycerate phosphatase; Reviewed
Probab=97.96 E-value=6.1e-05 Score=80.12 Aligned_cols=52 Identities=8% Similarity=0.037 Sum_probs=42.6
Q ss_pred cccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCc----cccCceEEEEe
Q 002029 488 DKLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSL----LRQGMRQVIIS 539 (978)
Q Consensus 488 D~lr~~v~~~I~~L~~aGIkv~mlTGD~~~tA~~ia~~~gl----~~~~~~~i~i~ 539 (978)
+..-+.+.++|++|+++||.+++.||........+.+++++ +..|+..+...
T Consensus 17 ~~~~~~a~~aL~~Lk~~GI~vVlaTGRt~~ev~~l~~~Lgl~~p~I~eNGA~I~~p 72 (302)
T PRK12702 17 FNSYGAARQALAALERRSIPLVLYSLRTRAQLEHLCRQLRLEHPFICEDGSAIYVP 72 (302)
T ss_pred CcCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHhCCCCeEEEeCCcEEEEc
Confidence 34566799999999999999999999999999999999997 44455555443
No 73
>TIGR01484 HAD-SF-IIB HAD-superfamily hydrolase, subfamily IIB. The IIB subfamily consists of Trehalose-6-phosphatase (TIGR00685), plant and cyanobacterial Sucrose-phosphatase and a closely related group of bacterial and archaeal sequences, eukaryotic phosphomannomutase (pfam03332), a large subfamily ("Cof-like hydrolases", TIGR00099) containing many closely related bacterial sequences, a hypothetical equivalog containing the E. coli YedP protein, as well as two small clusters containing sequences whose relationship to the other groups is unclear.
Probab=97.94 E-value=5.1e-05 Score=78.86 Aligned_cols=172 Identities=16% Similarity=0.179 Sum_probs=89.4
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHc--CccccCceEEEEecCCCcccccchhhhHHHHHHHHHHHHH
Q 002029 489 KLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFAC--SLLRQGMRQVIISSETPESKTLEKSEDKSAAAAALKASVL 566 (978)
Q Consensus 489 ~lr~~v~~~I~~L~~aGIkv~mlTGD~~~tA~~ia~~~--gl~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 566 (978)
++.+.+.++|++|++.|+++.++||+....+..+.+.. .++..++..+...+...... +.+.....+... +.+.
T Consensus 17 ~~~~~~~~~l~~l~~~g~~~~i~TGR~~~~~~~~~~~~~~~~i~~nGa~i~~~~~~~~~~--~~~~~~~~~~~~--~~~~ 92 (204)
T TIGR01484 17 ELSPETIEALERLREAGVKVVLVTGRSLAEIKELLKQLPLPLIAENGALIFYPGEILYIE--PSDVFEEILGIK--EEIG 92 (204)
T ss_pred cCCHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHhCCCCEEECCCcEEEECCEEEEEc--ccccHHHHHHhh--hhcC
Confidence 46788999999999999999999999999999998874 35666666655432211111 111111111100 0100
Q ss_pred HHHHhhhhhhcc--ccCCCCCeEEEEcCchhhhhchhhHHHHHHHHHhc-cCee------EEEeCCc--hhHHHHHHHHH
Q 002029 567 HQLIRGKELLDS--SNESLGPLALIIDGKSLTYALEDDVKDLFLELAIG-CASV------ICCRSSP--KQKALVTRLVK 635 (978)
Q Consensus 567 ~~~~~~~~~~~~--~~~~~~~~~lvi~G~~l~~~~~~~~~~~f~~l~~~-~~~v------i~~r~sP--~qK~~iV~~lk 635 (978)
..+......... ...+.........+..........+.......... .... -+..+.| ..|...++.+.
T Consensus 93 ~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ev~p~~~~K~~~~~~~~ 172 (204)
T TIGR01484 93 AELKSLSEHYVGTFIEDKAIAVAIHYVGAELGQELDSKMRERLEKIGRNDLELEAIYVGKTDLEVLPAGVDKGSALQALL 172 (204)
T ss_pred ceeeeeccccccceeecccceeeEEEeccchhhHHHHHHHHHHHhhccccCcEEEEEecCCEEEEecCCCChHHHHHHHH
Confidence 000000000000 00111112222222100001111222222211100 0111 1224445 58999999887
Q ss_pred ccCC---CeEEEEcCCcCCHHHhhhccccccc
Q 002029 636 TKTS---STTLAIGDGANDVGMLQEADIGVGI 664 (978)
Q Consensus 636 ~~~~---~~v~aiGDG~ND~~ml~~AdvGI~i 664 (978)
++.+ ..++++||+.||.+|++.|++||+|
T Consensus 173 ~~~~~~~~~~~~~GD~~nD~~~~~~~~~~vam 204 (204)
T TIGR01484 173 KELNGKRDEILAFGDSGNDEEMFEVAGLAVAV 204 (204)
T ss_pred HHhCCCHHHEEEEcCCHHHHHHHHHcCCceEC
Confidence 6544 5699999999999999999999986
No 74
>TIGR03333 salvage_mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase. Members of this family are the methionine salvage enzyme MnxX, a member of the HAD-superfamily hydrolases, subfamily IB (see TIGR01488). Members are found in Bacillus subtilis and related species, paired with MtnW (TIGR03332). In most species that recycle methionine from methylthioadenosine, the single protein MtnC replaces the MtnW/MtnX pair. In B. subtilis, mtnX was first known as ykrX.
Probab=97.91 E-value=5.1e-05 Score=79.46 Aligned_cols=138 Identities=13% Similarity=0.152 Sum_probs=85.3
Q ss_pred cccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCccccCceEEEEecCCCcccccchhhhHHHHHHHHHHHHHH
Q 002029 488 DKLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQGMRQVIISSETPESKTLEKSEDKSAAAAALKASVLH 567 (978)
Q Consensus 488 D~lr~~v~~~I~~L~~aGIkv~mlTGD~~~tA~~ia~~~gl~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 567 (978)
-+++||+++.++.|++.|+++.++||.....+..+....+... .+.. +.
T Consensus 69 ~~l~pg~~e~l~~l~~~g~~~~IvS~~~~~~i~~il~~~~~~~---~i~~-n~--------------------------- 117 (214)
T TIGR03333 69 AEIREGFREFVAFINEHGIPFYVISGGMDFFVYPLLEGIVEKD---RIYC-NE--------------------------- 117 (214)
T ss_pred CcccccHHHHHHHHHHCCCeEEEECCCcHHHHHHHHHhhCCcc---cEEe-ce---------------------------
Confidence 4799999999999999999999999999998888887764321 1100 00
Q ss_pred HHHhhhhhhccccCCCCCeEEEEcCchhhhhchhhHHHHHHHHHhccCeeE-EEeCCchhHHHHHHHHHccCCCeEEEEc
Q 002029 568 QLIRGKELLDSSNESLGPLALIIDGKSLTYALEDDVKDLFLELAIGCASVI-CCRSSPKQKALVTRLVKTKTSSTTLAIG 646 (978)
Q Consensus 568 ~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~f~~l~~~~~~vi-~~r~sP~qK~~iV~~lk~~~~~~v~aiG 646 (978)
+.++|..+..... . .... +.......|..+++.++. ....++|||
T Consensus 118 --------------------~~~~~~~~~~~~p-~------------~~~~~~~~~cg~~K~~~l~~~~~-~~~~~i~iG 163 (214)
T TIGR03333 118 --------------------ADFSNEYIHIDWP-H------------PCDGTCQNQCGCCKPSLIRKLSE-PNDYHIVIG 163 (214)
T ss_pred --------------------eEeeCCeeEEeCC-C------------CCccccccCCCCCHHHHHHHHhh-cCCcEEEEe
Confidence 0111211110000 0 0000 011114579999998886 567789999
Q ss_pred CCcCCHHHhhhccccccccCC-ccchhccccceehhchhhhHHHH
Q 002029 647 DGANDVGMLQEADIGVGISGV-EGMQAVMSSDIAIAQFRFLERLL 690 (978)
Q Consensus 647 DG~ND~~ml~~AdvGI~i~g~-e~~~a~~asD~vi~~f~~l~~ll 690 (978)
||.||..|.+.||++++-..- +-.+-...+.+.+.+|..+...|
T Consensus 164 Dg~~D~~~a~~Ad~~~ar~~l~~~~~~~~~~~~~~~~f~di~~~l 208 (214)
T TIGR03333 164 DSVTDVEAAKQSDLCFARDYLLNECEELGLNHAPFQDFYDVRKEL 208 (214)
T ss_pred CCHHHHHHHHhCCeeEehHHHHHHHHHcCCCccCcCCHHHHHHHH
Confidence 999999999999997754211 11111223455556666666554
No 75
>PLN02954 phosphoserine phosphatase
Probab=97.91 E-value=4.8e-05 Score=80.33 Aligned_cols=41 Identities=20% Similarity=0.428 Sum_probs=38.6
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCcc
Q 002029 489 KLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLL 529 (978)
Q Consensus 489 ~lr~~v~~~I~~L~~aGIkv~mlTGD~~~tA~~ia~~~gl~ 529 (978)
++.||++++++.|++.|+++.++||.....+..+...+|+.
T Consensus 84 ~l~pg~~e~l~~l~~~g~~~~IvS~~~~~~i~~~l~~~gi~ 124 (224)
T PLN02954 84 RLSPGIPELVKKLRARGTDVYLVSGGFRQMIAPVAAILGIP 124 (224)
T ss_pred CCCccHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHhCCC
Confidence 47899999999999999999999999999999999999884
No 76
>TIGR01488 HAD-SF-IB Haloacid Dehalogenase superfamily, subfamily IB, phosphoserine phosphatase-like. Subfamily IA includes the enzyme phosphoserine phosphatase (TIGR00338) as well as three hypothetical equivalogs. Many members of these hypothetical equivalogs have been annotated as PSPase-like or PSPase-family proteins. In particular, the hypothetical equivalog which appears to be most closely related to PSPase contains only Archaea (while TIGR00338 contains only eukaryotes and bacteria) of which some are annotated as PSPases. Although this is a reasonable conjecture, none of these sequences has sufficient evidence for this assignment. If such should be found, this model should be retired while the PSPase model should be broadened to include these sequences.
Probab=97.85 E-value=5e-05 Score=76.85 Aligned_cols=40 Identities=20% Similarity=0.165 Sum_probs=37.7
Q ss_pred cCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCcc
Q 002029 490 LQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLL 529 (978)
Q Consensus 490 lr~~v~~~I~~L~~aGIkv~mlTGD~~~tA~~ia~~~gl~ 529 (978)
+++++.+.++.+++.|++++++||.....+..++...|+-
T Consensus 74 ~~~g~~~~l~~l~~~g~~~~ivS~~~~~~i~~~~~~~g~~ 113 (177)
T TIGR01488 74 LRPGARELISWLKERGIDTVIVSGGFDFFVEPVAEKLGID 113 (177)
T ss_pred cCcCHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHcCCc
Confidence 6899999999999999999999999999999999998874
No 77
>PTZ00174 phosphomannomutase; Provisional
Probab=97.82 E-value=4e-05 Score=82.17 Aligned_cols=49 Identities=24% Similarity=0.377 Sum_probs=38.6
Q ss_pred EeCCch--hHHHHHHHHHccCCCeEEEEcC----CcCCHHHhhhc-cccccccCCcc
Q 002029 620 CRSSPK--QKALVTRLVKTKTSSTTLAIGD----GANDVGMLQEA-DIGVGISGVEG 669 (978)
Q Consensus 620 ~r~sP~--qK~~iV~~lk~~~~~~v~aiGD----G~ND~~ml~~A-dvGI~i~g~e~ 669 (978)
..+.|. +|+.-++.+.++ .+.|+++|| |.||.+||+.| -.|+++.+.+.
T Consensus 180 leI~~~gvsKg~al~~L~~~-~~eviafGD~~~~~~NDieMl~~~~~~g~~v~n~~~ 235 (247)
T PTZ00174 180 FDVFPKGWDKTYCLRHLEND-FKEIHFFGDKTFEGGNDYEIYNDPRTIGHSVKNPED 235 (247)
T ss_pred EEeeeCCCcHHHHHHHHHhh-hhhEEEEcccCCCCCCcHhhhhcCCCceEEeCCHHH
Confidence 345553 799999999884 689999999 99999999976 56777665544
No 78
>TIGR01490 HAD-SF-IB-hyp1 HAD-superfamily subfamily IB hydrolase, TIGR01490. A subset of these sequences, including the Caulobacter crescentus CicA protein, cluster together and may represent a separate equivalog.
Probab=97.81 E-value=6.3e-05 Score=78.01 Aligned_cols=112 Identities=12% Similarity=0.023 Sum_probs=77.9
Q ss_pred ccccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCccccCceEEEEecCCCcccccchhhhHHHHHHHHHHHHH
Q 002029 487 EDKLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQGMRQVIISSETPESKTLEKSEDKSAAAAALKASVL 566 (978)
Q Consensus 487 eD~lr~~v~~~I~~L~~aGIkv~mlTGD~~~tA~~ia~~~gl~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 566 (978)
..++++++.+.|+.+++.|++++++||-....+..+++.+|+..--+..+..+.+.
T Consensus 85 ~~~~~~~~~~~l~~l~~~g~~v~ivS~s~~~~v~~~~~~lg~~~~~~~~l~~~~~g------------------------ 140 (202)
T TIGR01490 85 ESILYPEARDLIRWHKAEGHTIVLVSASLTILVKPLARILGIDNAIGTRLEESEDG------------------------ 140 (202)
T ss_pred HHhccHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHcCCcceEecceEEcCCC------------------------
Confidence 45789999999999999999999999999999999999999832100001100000
Q ss_pred HHHHhhhhhhccccCCCCCeEEEEcCchhhhhchhhHHHHHHHHHhccCeeEEEeCCchhHHHHHHHHHccCC---CeEE
Q 002029 567 HQLIRGKELLDSSNESLGPLALIIDGKSLTYALEDDVKDLFLELAIGCASVICCRSSPKQKALVTRLVKTKTS---STTL 643 (978)
Q Consensus 567 ~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~f~~l~~~~~~vi~~r~sP~qK~~iV~~lk~~~~---~~v~ 643 (978)
..+|+.. --.+.++.|...++.+.+..+ +.++
T Consensus 141 ----------------------~~~g~~~-----------------------~~~~~g~~K~~~l~~~~~~~~~~~~~~~ 175 (202)
T TIGR01490 141 ----------------------IYTGNID-----------------------GNNCKGEGKVHALAELLAEEQIDLKDSY 175 (202)
T ss_pred ----------------------EEeCCcc-----------------------CCCCCChHHHHHHHHHHHHcCCCHHHcE
Confidence 1122110 012345678777766544233 4789
Q ss_pred EEcCCcCCHHHhhhccccccccCC
Q 002029 644 AIGDGANDVGMLQEADIGVGISGV 667 (978)
Q Consensus 644 aiGDG~ND~~ml~~AdvGI~i~g~ 667 (978)
++||+.+|.+|++.|+.++.+...
T Consensus 176 ~~gDs~~D~~~~~~a~~~~~v~~~ 199 (202)
T TIGR01490 176 AYGDSISDLPLLSLVGHPYVVNPD 199 (202)
T ss_pred eeeCCcccHHHHHhCCCcEEeCCC
Confidence 999999999999999999987543
No 79
>PLN02382 probable sucrose-phosphatase
Probab=97.74 E-value=0.00013 Score=83.81 Aligned_cols=174 Identities=13% Similarity=0.079 Sum_probs=90.4
Q ss_pred hHHHH-HHHHHcCCeEEEEcCCChhhHHHHHHHcCccccC------ceEEEEecCCCcccccchhhhHHHHHHHHHHHHH
Q 002029 494 VPECI-DKLAQAGIKLWVLTGDKMETAINIGFACSLLRQG------MRQVIISSETPESKTLEKSEDKSAAAAALKASVL 566 (978)
Q Consensus 494 v~~~I-~~L~~aGIkv~mlTGD~~~tA~~ia~~~gl~~~~------~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 566 (978)
..+++ +++++.|+..++.||+....+..+.++.++..++ +..+....... ....-...+.........
T Consensus 33 ~~~~l~~~~~~~gi~fv~aTGR~~~~~~~l~~~~~l~~p~~~I~~nGt~I~~~~~~~-----~d~~w~~~l~~~w~~~~v 107 (413)
T PLN02382 33 RFNALWEAEYRHDSLLVFSTGRSPTLYKELRKEKPLLTPDITIMSVGTEIAYGESMV-----PDHGWVEYLNKKWDREIV 107 (413)
T ss_pred HHHHHHHHhhcCCeeEEEEcCCCHHHHHHHHHhCCCCCCCEEEEcCCcEEEeCCCCc-----cChhHHHHHhccCChhhH
Confidence 33444 8899999999999999999999999999987664 22232211110 111111111111111100
Q ss_pred HHHHhhhhhh--ccccC-CCCCeEEEEcCchhhhhchhhHHHHHHHHHhccCe----eEEEeCCch--hHHHHHHHHHcc
Q 002029 567 HQLIRGKELL--DSSNE-SLGPLALIIDGKSLTYALEDDVKDLFLELAIGCAS----VICCRSSPK--QKALVTRLVKTK 637 (978)
Q Consensus 567 ~~~~~~~~~~--~~~~~-~~~~~~lvi~G~~l~~~~~~~~~~~f~~l~~~~~~----vi~~r~sP~--qK~~iV~~lk~~ 637 (978)
.........+ ..... ...+..+..+.+....+ .+.+.+.+......++. .-+..+.|. .|+..++.+.++
T Consensus 108 ~~~~~~~~~l~~q~~~~~~~~Ki~~~~~~~~~~~~-~~~l~~~~~~~g~~~~i~~s~~~~ldI~p~g~sKg~Al~~L~~~ 186 (413)
T PLN02382 108 VEETSKFPELKLQPETEQRPHKVSFYVDKKKAQEV-IKELSERLEKRGLDVKIIYSGGIDLDVLPQGAGKGQALAYLLKK 186 (413)
T ss_pred HHHHhcCCCcccCCcccCCCeEEEEEechHHhHHH-HHHHHHHHHhcCCcEEEEEECCcEEEEEeCCCCHHHHHHHHHHH
Confidence 1100000001 01111 11122233332222211 12233333221111111 124456665 599999988775
Q ss_pred C---C---CeEEEEcCCcCCHHHhhhcc-ccccccCCccchhcc
Q 002029 638 T---S---STTLAIGDGANDVGMLQEAD-IGVGISGVEGMQAVM 674 (978)
Q Consensus 638 ~---~---~~v~aiGDG~ND~~ml~~Ad-vGI~i~g~e~~~a~~ 674 (978)
. | ..|+++||+.||.+||+.|+ .||+|.+.... .+.
T Consensus 187 ~~~~gi~~~~~iafGDs~NDleMl~~ag~~gvam~NA~~e-lk~ 229 (413)
T PLN02382 187 LKAEGKAPVNTLVCGDSGNDAELFSVPDVYGVMVSNAQEE-LLQ 229 (413)
T ss_pred hhhcCCChhcEEEEeCCHHHHHHHhcCCCCEEEEcCCcHH-HHH
Confidence 4 3 58999999999999999999 69999665432 443
No 80
>TIGR01489 DKMTPPase-SF 2,3-diketo-5-methylthio-1-phosphopentane phosphatase. Note that SP|P53981 from S. cerevisiae, a member of this family, is annotated as a "probable membrane protein" due to a predicted transmembrane helix. The region in question contains the second of the three conserved HAD superfamily catalytic motifs and thus, considering the fold of the HAD catalytic domain, is unlikely to be a transmembrane region in fact.
Probab=97.70 E-value=0.00016 Score=73.96 Aligned_cols=42 Identities=14% Similarity=0.078 Sum_probs=38.8
Q ss_pred cccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCcc
Q 002029 488 DKLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLL 529 (978)
Q Consensus 488 D~lr~~v~~~I~~L~~aGIkv~mlTGD~~~tA~~ia~~~gl~ 529 (978)
-++.+++.+.++.|++.|+++.++|+.....+..+.+..|+.
T Consensus 71 ~~l~~g~~~ll~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~ 112 (188)
T TIGR01489 71 APIDPGFKEFIAFIKEHGIDFIVISDGNDFFIDPVLEGIGEK 112 (188)
T ss_pred CCCCccHHHHHHHHHHcCCcEEEEeCCcHHHHHHHHHHcCCh
Confidence 479999999999999999999999999999999999888874
No 81
>COG1778 Low specificity phosphatase (HAD superfamily) [General function prediction only]
Probab=97.68 E-value=0.00013 Score=69.01 Aligned_cols=112 Identities=15% Similarity=0.214 Sum_probs=80.4
Q ss_pred HHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCccccCceEEEEecCCCcccccchhhhHHHHHHHHHHHHHHHHHhhhhh
Q 002029 496 ECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQGMRQVIISSETPESKTLEKSEDKSAAAAALKASVLHQLIRGKEL 575 (978)
Q Consensus 496 ~~I~~L~~aGIkv~mlTGD~~~tA~~ia~~~gl~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 575 (978)
..|+.|+++||++-++||++...+..=|+++|+-.
T Consensus 42 ~Gik~l~~~Gi~vAIITGr~s~ive~Ra~~LGI~~--------------------------------------------- 76 (170)
T COG1778 42 HGIKLLLKSGIKVAIITGRDSPIVEKRAKDLGIKH--------------------------------------------- 76 (170)
T ss_pred HHHHHHHHcCCeEEEEeCCCCHHHHHHHHHcCCce---------------------------------------------
Confidence 47999999999999999999999999999999821
Q ss_pred hccccCCCCCeEEEEcCchhhhhchhhHHHHHHHHHhccCeeEEEeCCchhHHHHHHHHHccCC---CeEEEEcCCcCCH
Q 002029 576 LDSSNESLGPLALIIDGKSLTYALEDDVKDLFLELAIGCASVICCRSSPKQKALVTRLVKTKTS---STTLAIGDGANDV 652 (978)
Q Consensus 576 ~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~f~~l~~~~~~vi~~r~sP~qK~~iV~~lk~~~~---~~v~aiGDG~ND~ 652 (978)
+..| -++|....+.+.++.+ +.|+.+||-.||.
T Consensus 77 -------------~~qG-------------------------------~~dK~~a~~~L~~~~~l~~e~~ayiGDD~~Dl 112 (170)
T COG1778 77 -------------LYQG-------------------------------ISDKLAAFEELLKKLNLDPEEVAYVGDDLVDL 112 (170)
T ss_pred -------------eeec-------------------------------hHhHHHHHHHHHHHhCCCHHHhhhhcCccccH
Confidence 0111 1334444444433333 6899999999999
Q ss_pred HHhhhccccccccCCccchhccccceehhc------hhhhHHHHHHhhhhhh
Q 002029 653 GMLQEADIGVGISGVEGMQAVMSSDIAIAQ------FRFLERLLLVHGHWCY 698 (978)
Q Consensus 653 ~ml~~AdvGI~i~g~e~~~a~~asD~vi~~------f~~l~~lll~~gR~~~ 698 (978)
|+|+..+.+++....... .++.||++... .+....+ +..++..+
T Consensus 113 pvm~~vGls~a~~dAh~~-v~~~a~~Vt~~~GG~GAvREv~dl-il~aq~~~ 162 (170)
T COG1778 113 PVMEKVGLSVAVADAHPL-LKQRADYVTSKKGGEGAVREVCDL-ILQAQGKL 162 (170)
T ss_pred HHHHHcCCcccccccCHH-HHHhhHhhhhccCcchHHHHHHHH-HHHccCcH
Confidence 999999999988555433 56778888764 5556666 44444333
No 82
>PRK14501 putative bifunctional trehalose-6-phosphate synthase/HAD hydrolase subfamily IIB; Provisional
Probab=97.67 E-value=0.00068 Score=84.26 Aligned_cols=187 Identities=15% Similarity=0.087 Sum_probs=98.2
Q ss_pred cCCChHHHHHHHHH-cCCeEEEEcCCChhhHHHHHHHcC--ccccCceEEEEecCCCcccccchhhhHHHHHHHHHHHHH
Q 002029 490 LQNGVPECIDKLAQ-AGIKLWVLTGDKMETAINIGFACS--LLRQGMRQVIISSETPESKTLEKSEDKSAAAAALKASVL 566 (978)
Q Consensus 490 lr~~v~~~I~~L~~-aGIkv~mlTGD~~~tA~~ia~~~g--l~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 566 (978)
+-+++.++|++|.+ .|+.|+++||+............+ ++..++..+...+..-.........-.+......
T Consensus 515 ~~~~~~~~L~~L~~d~g~~V~ivSGR~~~~l~~~~~~~~l~liaenG~~i~~~~~~w~~~~~~~~~w~~~v~~il----- 589 (726)
T PRK14501 515 PDKELRDLLRRLAADPNTDVAIISGRDRDTLERWFGDLPIHLVAEHGAWSRAPGGEWQLLEPVATEWKDAVRPIL----- 589 (726)
T ss_pred CCHHHHHHHHHHHcCCCCeEEEEeCCCHHHHHHHhCCCCeEEEEeCCEEEeCCCCceEECCCcchhHHHHHHHHH-----
Confidence 55788899999999 699999999999998888766444 5556655544222211100000100011111111
Q ss_pred HHHHhhhhhhccccCCCCCeEEEEcCc----hhhhhchhhHHHHHHHHHhccCeeEE-----EeCCc--hhHHHHHHHHH
Q 002029 567 HQLIRGKELLDSSNESLGPLALIIDGK----SLTYALEDDVKDLFLELAIGCASVIC-----CRSSP--KQKALVTRLVK 635 (978)
Q Consensus 567 ~~~~~~~~~~~~~~~~~~~~~lvi~G~----~l~~~~~~~~~~~f~~l~~~~~~vi~-----~r~sP--~qK~~iV~~lk 635 (978)
..+.. ......-......+...-. .+.....+++...+..+.......+. ..+.| -+|+..++.+.
T Consensus 590 ~~~~~---~~~gs~ie~k~~~l~~~~r~~d~~~~~~~a~~l~~~l~~~~~~~~~~v~~g~~~veV~p~~vnKG~al~~ll 666 (726)
T PRK14501 590 EEFVD---RTPGSFIEEKEASLAWHYRNADPELGEARANELILALSSLLSNAPLEVLRGNKVVEVRPAGVNKGRAVRRLL 666 (726)
T ss_pred HHHHh---cCCCcEEEEcceEEEEEccCCCHHHHHHHHHHHHHHHHHHhcCCCeEEEECCeEEEEEECCCCHHHHHHHHH
Confidence 11111 0000000111122322211 11111112333333333222111121 23445 48999999887
Q ss_pred cc-CCCeEEEEcCCcCCHHHhhhc---cccccccCCccchhccccceehhchhhhHHH
Q 002029 636 TK-TSSTTLAIGDGANDVGMLQEA---DIGVGISGVEGMQAVMSSDIAIAQFRFLERL 689 (978)
Q Consensus 636 ~~-~~~~v~aiGDG~ND~~ml~~A---dvGI~i~g~e~~~a~~asD~vi~~f~~l~~l 689 (978)
+. ....++++||+.||.+|++.+ ..||++.+ +..+|++.+.+-..+..+
T Consensus 667 ~~~~~d~vl~~GD~~nDe~Mf~~~~~~~~~v~vG~-----~~s~A~~~l~~~~eV~~~ 719 (726)
T PRK14501 667 EAGPYDFVLAIGDDTTDEDMFRALPETAITVKVGP-----GESRARYRLPSQREVREL 719 (726)
T ss_pred hcCCCCEEEEECCCCChHHHHHhcccCceEEEECC-----CCCcceEeCCCHHHHHHH
Confidence 63 236899999999999999997 45666633 345789999875544333
No 83
>PRK09552 mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase; Reviewed
Probab=97.66 E-value=0.00023 Score=74.87 Aligned_cols=38 Identities=13% Similarity=0.216 Sum_probs=35.9
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHc
Q 002029 489 KLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFAC 526 (978)
Q Consensus 489 ~lr~~v~~~I~~L~~aGIkv~mlTGD~~~tA~~ia~~~ 526 (978)
+++||+.++++.|++.|+++.++||-....+..+.+..
T Consensus 74 ~l~pG~~e~l~~l~~~g~~~~IvS~~~~~~i~~il~~~ 111 (219)
T PRK09552 74 EIREGFHEFVQFVKENNIPFYVVSGGMDFFVYPLLQGL 111 (219)
T ss_pred CcCcCHHHHHHHHHHcCCeEEEECCCcHHHHHHHHHHh
Confidence 68999999999999999999999999999999888887
No 84
>cd01427 HAD_like Haloacid dehalogenase-like hydrolases. The haloacid dehalogenase-like (HAD) superfamily includes L-2-haloacid dehalogenase, epoxide hydrolase, phosphoserine phosphatase, phosphomannomutase, phosphoglycolate phosphatase, P-type ATPase, and many others, all of which use a nucleophilic aspartate in their phosphoryl transfer reaction. All members possess a highly conserved alpha/beta core domain, and many also possess a small cap domain, the fold and function of which is variable. Members of this superfamily are sometimes referred to as belonging to the DDDD superfamily of phosphohydrolases.
Probab=97.61 E-value=0.00013 Score=69.67 Aligned_cols=44 Identities=27% Similarity=0.284 Sum_probs=40.2
Q ss_pred eccccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCcc
Q 002029 486 VEDKLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLL 529 (978)
Q Consensus 486 ieD~lr~~v~~~I~~L~~aGIkv~mlTGD~~~tA~~ia~~~gl~ 529 (978)
-..++.+++++.+++|++.|++++++||.....+....+.+|+.
T Consensus 21 ~~~~~~~~~~~~l~~l~~~g~~i~ivS~~~~~~~~~~~~~~~~~ 64 (139)
T cd01427 21 EELELYPGVKEALKELKEKGIKLALATNKSRREVLELLEELGLD 64 (139)
T ss_pred ccCCcCcCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHHHcCCc
Confidence 34588999999999999999999999999999999999998873
No 85
>PRK13222 phosphoglycolate phosphatase; Provisional
Probab=97.45 E-value=0.0006 Score=72.01 Aligned_cols=42 Identities=26% Similarity=0.249 Sum_probs=38.6
Q ss_pred cccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCcc
Q 002029 488 DKLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLL 529 (978)
Q Consensus 488 D~lr~~v~~~I~~L~~aGIkv~mlTGD~~~tA~~ia~~~gl~ 529 (978)
.++.+|+.+.++.|++.|+++.++||.....+..+.+..|+.
T Consensus 92 ~~~~~g~~~~l~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~ 133 (226)
T PRK13222 92 SRLYPGVKETLAALKAAGYPLAVVTNKPTPFVAPLLEALGIA 133 (226)
T ss_pred CccCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCCc
Confidence 468899999999999999999999999999999999888873
No 86
>TIGR01454 AHBA_synth_RP 3-amino-5-hydroxybenoic acid synthesis related protein. The most closely related enzyme below the noise cutoff is IndB which is involved in the biosynthesis of Indigoidine in Pectobacterium (Erwinia) chrysanthemi, a gamma proteobacter. This enzyme is similarly related to PGP. In this case, too it is unclear what role would be be played by a PGPase activity.
Probab=97.35 E-value=0.00068 Score=70.46 Aligned_cols=41 Identities=29% Similarity=0.340 Sum_probs=37.5
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCcc
Q 002029 489 KLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLL 529 (978)
Q Consensus 489 ~lr~~v~~~I~~L~~aGIkv~mlTGD~~~tA~~ia~~~gl~ 529 (978)
++.+|+.++++.|+++|+++.++||.....+..+....|+.
T Consensus 75 ~~~~g~~~~L~~L~~~g~~~~i~Sn~~~~~~~~~l~~~~l~ 115 (205)
T TIGR01454 75 EVFPGVPELLAELRADGVGTAIATGKSGPRARSLLEALGLL 115 (205)
T ss_pred ccCCCHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHcCCh
Confidence 78899999999999999999999999998888888888873
No 87
>COG0546 Gph Predicted phosphatases [General function prediction only]
Probab=97.19 E-value=0.0015 Score=68.69 Aligned_cols=126 Identities=24% Similarity=0.196 Sum_probs=84.6
Q ss_pred ccccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCccccCceEEEEecCCCcccccchhhhHHHHHHHHHHHHH
Q 002029 487 EDKLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQGMRQVIISSETPESKTLEKSEDKSAAAAALKASVL 566 (978)
Q Consensus 487 eD~lr~~v~~~I~~L~~aGIkv~mlTGD~~~tA~~ia~~~gl~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 566 (978)
+.++-++++++++.|+++|++..++|++....+..+.+..|+...-..++.
T Consensus 87 ~~~~~~gv~e~L~~L~~~g~~l~i~T~k~~~~~~~~l~~~gl~~~F~~i~g----------------------------- 137 (220)
T COG0546 87 ESRLFPGVKELLAALKSAGYKLGIVTNKPERELDILLKALGLADYFDVIVG----------------------------- 137 (220)
T ss_pred cCccCCCHHHHHHHHHhCCCeEEEEeCCcHHHHHHHHHHhCCccccceEEc-----------------------------
Confidence 567899999999999999999999999999999999999988542211111
Q ss_pred HHHHhhhhhhccccCCCCCeEEEEcCchhhhhchhhHHHHHHHHHhccCeeEEEeCCchhHHHHHHHHHccCCCeEEEEc
Q 002029 567 HQLIRGKELLDSSNESLGPLALIIDGKSLTYALEDDVKDLFLELAIGCASVICCRSSPKQKALVTRLVKTKTSSTTLAIG 646 (978)
Q Consensus 567 ~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~f~~l~~~~~~vi~~r~sP~qK~~iV~~lk~~~~~~v~aiG 646 (978)
+... -...-.|.....+.+.+.. ..+.++|||
T Consensus 138 -------------------------~~~~----------------------~~~KP~P~~l~~~~~~~~~-~~~~~l~VG 169 (220)
T COG0546 138 -------------------------GDDV----------------------PPPKPDPEPLLLLLEKLGL-DPEEALMVG 169 (220)
T ss_pred -------------------------CCCC----------------------CCCCcCHHHHHHHHHHhCC-ChhheEEEC
Confidence 0000 0011123333344444433 224799999
Q ss_pred CCcCCHHHhhhccc---cccccCC-ccchhccccceehhchhhhHHH
Q 002029 647 DGANDVGMLQEADI---GVGISGV-EGMQAVMSSDIAIAQFRFLERL 689 (978)
Q Consensus 647 DG~ND~~ml~~Adv---GI~i~g~-e~~~a~~asD~vi~~f~~l~~l 689 (978)
|..+|..|=++|++ ||.-... ...-....+|+++.+...|...
T Consensus 170 Ds~~Di~aA~~Ag~~~v~v~~g~~~~~~l~~~~~d~vi~~~~el~~~ 216 (220)
T COG0546 170 DSLNDILAAKAAGVPAVGVTWGYNSREELAQAGADVVIDSLAELLAL 216 (220)
T ss_pred CCHHHHHHHHHcCCCEEEEECCCCCCcchhhcCCCEEECCHHHHHHH
Confidence 99999999999994 4432211 1222445689999987776655
No 88
>TIGR01449 PGP_bact 2-phosphoglycolate phosphatase, prokaryotic. This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolase enzymes (pfam00702).
Probab=97.17 E-value=0.0012 Score=68.98 Aligned_cols=41 Identities=20% Similarity=0.188 Sum_probs=37.9
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCcc
Q 002029 489 KLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLL 529 (978)
Q Consensus 489 ~lr~~v~~~I~~L~~aGIkv~mlTGD~~~tA~~ia~~~gl~ 529 (978)
++.+|+.++++.|+++|+++.++|+.....+..+.+..|+.
T Consensus 85 ~~~~g~~~~L~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~ 125 (213)
T TIGR01449 85 SVFPGVEATLGALRAKGLRLGLVTNKPTPLARPLLELLGLA 125 (213)
T ss_pred ccCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCcH
Confidence 68999999999999999999999999999999998888874
No 89
>TIGR01545 YfhB_g-proteo haloacid dehalogenase superfamily, subfamily IF hydrolase, YfhB. The gene name comes from the E. coli gene. There is currently no information regarding the function of this gene.
Probab=97.07 E-value=0.0031 Score=65.61 Aligned_cols=110 Identities=15% Similarity=0.101 Sum_probs=75.8
Q ss_pred ccCCChHHHHH-HHHHcCCeEEEEcCCChhhHHHHHHHcCccccCceEEEEecCCCcccccchhhhHHHHHHHHHHHHHH
Q 002029 489 KLQNGVPECID-KLAQAGIKLWVLTGDKMETAINIGFACSLLRQGMRQVIISSETPESKTLEKSEDKSAAAAALKASVLH 567 (978)
Q Consensus 489 ~lr~~v~~~I~-~L~~aGIkv~mlTGD~~~tA~~ia~~~gl~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 567 (978)
.+.|++.++|+ .+++.|++++++|+-....+..+|+..++.... .++...-+
T Consensus 94 ~l~pga~e~L~~~l~~~G~~v~IvSas~~~~~~~ia~~~~~~~~~-~~i~t~le-------------------------- 146 (210)
T TIGR01545 94 TAFPLVAERLRQYLESSDADIWLITGSPQPLVEAVYFDSNFIHRL-NLIASQIE-------------------------- 146 (210)
T ss_pred CCCccHHHHHHHHHHhCCCEEEEEcCCcHHHHHHHHHhccccccC-cEEEEEeE--------------------------
Confidence 57999999996 788899999999999999999999986664321 12211100
Q ss_pred HHHhhhhhhccccCCCCCeEEEEcCchhhhhchhhHHHHHHHHHhccCeeEEEeCCchhHHHHHHHHHccCCCeEEEEcC
Q 002029 568 QLIRGKELLDSSNESLGPLALIIDGKSLTYALEDDVKDLFLELAIGCASVICCRSSPKQKALVTRLVKTKTSSTTLAIGD 647 (978)
Q Consensus 568 ~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~f~~l~~~~~~vi~~r~sP~qK~~iV~~lk~~~~~~v~aiGD 647 (978)
+.+|.. +..-.|..+.|..-++..-......+.+-||
T Consensus 147 ---------------------~~~gg~----------------------~~g~~c~g~~Kv~rl~~~~~~~~~~~~aYsD 183 (210)
T TIGR01545 147 ---------------------RGNGGW----------------------VLPLRCLGHEKVAQLEQKIGSPLKLYSGYSD 183 (210)
T ss_pred ---------------------EeCCce----------------------EcCccCCChHHHHHHHHHhCCChhheEEecC
Confidence 001100 0122355678877665432213356789999
Q ss_pred CcCCHHHhhhccccccccCCc
Q 002029 648 GANDVGMLQEADIGVGISGVE 668 (978)
Q Consensus 648 G~ND~~ml~~AdvGI~i~g~e 668 (978)
+.||.|||+.||.++.++..+
T Consensus 184 S~~D~pmL~~a~~~~~Vnp~~ 204 (210)
T TIGR01545 184 SKQDNPLLAFCEHRWRVSKRG 204 (210)
T ss_pred CcccHHHHHhCCCcEEECcch
Confidence 999999999999999986554
No 90
>PRK13223 phosphoglycolate phosphatase; Provisional
Probab=97.05 E-value=0.0022 Score=69.82 Aligned_cols=41 Identities=12% Similarity=0.175 Sum_probs=36.7
Q ss_pred cccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCc
Q 002029 488 DKLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSL 528 (978)
Q Consensus 488 D~lr~~v~~~I~~L~~aGIkv~mlTGD~~~tA~~ia~~~gl 528 (978)
.++.+++.++++.|+++|+++.++||.....+..+....|+
T Consensus 100 ~~~~~g~~e~L~~Lk~~g~~l~ivTn~~~~~~~~~l~~~~i 140 (272)
T PRK13223 100 TVVYPGVRDTLKWLKKQGVEMALITNKPERFVAPLLDQMKI 140 (272)
T ss_pred CccCCCHHHHHHHHHHCCCeEEEEECCcHHHHHHHHHHcCc
Confidence 47889999999999999999999999998888877777776
No 91
>PLN02423 phosphomannomutase
Probab=96.98 E-value=0.0031 Score=67.35 Aligned_cols=49 Identities=18% Similarity=0.351 Sum_probs=38.9
Q ss_pred EEeCCch--hHHHHHHHHHccCCCeEEEEcC----CcCCHHHhhh-ccccccccCCcc
Q 002029 619 CCRSSPK--QKALVTRLVKTKTSSTTLAIGD----GANDVGMLQE-ADIGVGISGVEG 669 (978)
Q Consensus 619 ~~r~sP~--qK~~iV~~lk~~~~~~v~aiGD----G~ND~~ml~~-AdvGI~i~g~e~ 669 (978)
+..+.|. +|+..++.++ ....|+|+|| |.||.+||+. -=.|+.+++-+.
T Consensus 180 ~iDi~~~gvnKg~al~~L~--~~~e~~aFGD~~~~~~ND~eMl~~~~~~~~~~~~~~~ 235 (245)
T PLN02423 180 SFDVFPQGWDKTYCLQFLE--DFDEIHFFGDKTYEGGNDHEIFESERTIGHTVTSPDD 235 (245)
T ss_pred EEEEeeCCCCHHHHHHHhc--CcCeEEEEeccCCCCCCcHHHHhCCCcceEEeCCHHH
Confidence 3344544 7999999998 5678999999 8999999997 666788876544
No 92
>PRK13226 phosphoglycolate phosphatase; Provisional
Probab=96.96 E-value=0.0038 Score=66.08 Aligned_cols=40 Identities=23% Similarity=0.126 Sum_probs=35.9
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCc
Q 002029 489 KLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSL 528 (978)
Q Consensus 489 ~lr~~v~~~I~~L~~aGIkv~mlTGD~~~tA~~ia~~~gl 528 (978)
++.||+.++++.|++.|+++.++|+.....+..+-...|+
T Consensus 95 ~~~pg~~~~L~~L~~~g~~l~i~Tn~~~~~~~~~l~~~~l 134 (229)
T PRK13226 95 QLFDGVEGMLQRLECAGCVWGIVTNKPEYLARLILPQLGW 134 (229)
T ss_pred eeCCCHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCc
Confidence 5789999999999999999999999998888777777776
No 93
>TIGR01544 HAD-SF-IE haloacid dehalogenase superfamily, subfamily IE hydrolase, TIGR01544. This group of sequences was found during searches for members of the haloacid dehalogenase (HAD) superfamily. All of the conserved catalytic motifs are found. The placement of the variable domain between motifs 1 and 2 indicates membership in subfamily I of the superfamily, but these sequences are sufficiently different from any of the branches (IA, TIGR01493, TIGR01509, TIGR01549; IB, TIGR01488; IC, TIGR01494; ID, TIGR01658; IF TIGR01545) of that subfamily as to constitute a separate branch to now be called IE. Considering that the closest identifiable hit outside of the noise range is to a phosphoserine phosphatase, this group may be considered to be most closely allied to subfamily IB.
Probab=96.87 E-value=0.0047 Score=66.12 Aligned_cols=45 Identities=16% Similarity=0.262 Sum_probs=41.1
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCccccCc
Q 002029 489 KLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQGM 533 (978)
Q Consensus 489 ~lr~~v~~~I~~L~~aGIkv~mlTGD~~~tA~~ia~~~gl~~~~~ 533 (978)
+++||+++.++.|++.|+++.++||-....+..+.++.|+...+.
T Consensus 121 ~l~pG~~efl~~L~~~GIpv~IvS~G~~~~Ie~vL~~lgl~~~~~ 165 (277)
T TIGR01544 121 MLKDGYENFFDKLQQHSIPVFIFSAGIGNVLEEVLRQAGVYHPNV 165 (277)
T ss_pred ccCcCHHHHHHHHHHCCCcEEEEeCCcHHHHHHHHHHcCCCCcCc
Confidence 579999999999999999999999999999999999999865543
No 94
>PRK13288 pyrophosphatase PpaX; Provisional
Probab=96.85 E-value=0.0038 Score=65.32 Aligned_cols=41 Identities=22% Similarity=0.058 Sum_probs=37.4
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCcc
Q 002029 489 KLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLL 529 (978)
Q Consensus 489 ~lr~~v~~~I~~L~~aGIkv~mlTGD~~~tA~~ia~~~gl~ 529 (978)
++.+|+.++++.|+++|+++.++||.....+..+.+..|+.
T Consensus 82 ~~~~g~~~~l~~L~~~g~~~~i~S~~~~~~~~~~l~~~gl~ 122 (214)
T PRK13288 82 TEYETVYETLKTLKKQGYKLGIVTTKMRDTVEMGLKLTGLD 122 (214)
T ss_pred ccCcCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCCh
Confidence 47899999999999999999999999999988888888874
No 95
>PLN02580 trehalose-phosphatase
Probab=96.83 E-value=0.025 Score=63.48 Aligned_cols=237 Identities=11% Similarity=0.114 Sum_probs=114.7
Q ss_pred HHHHHHHHHHHHHHhhcccccHHHHHHHHHH------HhhcccEEEEEEeeccc----cCCChHHHHHHHHHcCCeEEEE
Q 002029 442 EKEYKQFNEEFTEAKNSVSADREELAEEIAE------KIEKNLILLGATAVEDK----LQNGVPECIDKLAQAGIKLWVL 511 (978)
Q Consensus 442 ~~e~~~~~~~~~~a~~~l~~~r~~~~~~~~~------~ie~dl~llG~i~ieD~----lr~~v~~~I~~L~~aGIkv~ml 511 (978)
+++|..|..++-.|-.++ ++. ..... .+--|.||.-++ .|| +-+++.++++.|.+. .+|.++
T Consensus 91 ~~~~~~~~~~~p~al~~~----~~~-~~~~~~k~~~LfLDyDGTLaPIv--~~Pd~A~~s~~~~~aL~~La~~-~~VAIV 162 (384)
T PLN02580 91 DFAYRTWMLKYPSALTSF----EQI-ANFAKGKKIALFLDYDGTLSPIV--DDPDRALMSDAMRSAVKNVAKY-FPTAII 162 (384)
T ss_pred hHHHHHHHHhCcHHHHHH----HHH-HHHhhcCCeEEEEecCCccCCCC--CCcccccCCHHHHHHHHHHhhC-CCEEEE
Confidence 567889999988877554 111 11111 112344444333 222 345788899999877 489999
Q ss_pred cCCChhhHHHHHHHcCc--cccCceEEEE-ecCCC----ccc-c-cchhhhH-------HHHHHHHHHHHHHHHHhhhhh
Q 002029 512 TGDKMETAINIGFACSL--LRQGMRQVII-SSETP----ESK-T-LEKSEDK-------SAAAAALKASVLHQLIRGKEL 575 (978)
Q Consensus 512 TGD~~~tA~~ia~~~gl--~~~~~~~i~i-~~~~~----~~~-~-~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~ 575 (978)
||+..........-.++ ....+-.+.- .+... ... . .+.+... ...... .+.+..++......
T Consensus 163 SGR~~~~L~~~l~~~~l~laGsHG~e~~~p~~~~~~~~~~~~~~~~~~~g~~~~~~~~a~~~~~~-i~~v~~~l~e~~~~ 241 (384)
T PLN02580 163 SGRSRDKVYELVGLTELYYAGSHGMDIMGPVRESVSNDHPNCIKSTDQQGKEVNLFQPASEFLPM-IDEVFRSLVESTKD 241 (384)
T ss_pred eCCCHHHHHHHhCCCCccEEEeCCceeecCCCCcccccccccccccccccccccccccchhhhhh-HHHHHHHHHHHhcc
Confidence 99999998876654333 1111111110 00000 000 0 0000000 000000 01222222222222
Q ss_pred hccccCCCCCeEEEEcCchhhhhchhhHHHHHHHHHhccC-e-----eEEEeCCc---hhHHHHHHHHHccCC---C---
Q 002029 576 LDSSNESLGPLALIIDGKSLTYALEDDVKDLFLELAIGCA-S-----VICCRSSP---KQKALVTRLVKTKTS---S--- 640 (978)
Q Consensus 576 ~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~f~~l~~~~~-~-----vi~~r~sP---~qK~~iV~~lk~~~~---~--- 640 (978)
.....-+.+.+++.+.=..............+..+..... . --+.++.| -+|+..|+.+.+..+ .
T Consensus 242 ~pGs~VE~K~~svavHYR~a~~~~~~~~~~~l~~~l~~~~~l~v~~Gk~vlEVrP~~g~~KG~Av~~Ll~~~g~~~~d~~ 321 (384)
T PLN02580 242 IKGAKVENHKFCVSVHYRNVDEKNWPLVAQCVHDVLKKYPRLRLTHGRKVLEVRPVIDWNKGKAVEFLLESLGLSNCDDV 321 (384)
T ss_pred CCCCEEEecCcEEEEEeCCCCchHHHHHHHHHHHHHHhCCceEEEeCCeEEEEecCCCCCHHHHHHHHHHhcCCCcccce
Confidence 2222223344455544332221111112222222211111 0 11334555 399999998776543 1
Q ss_pred eEEEEcCCcCCHHHhhh-----ccccccccCCccchhccccceehhchhhhHHHH
Q 002029 641 TTLAIGDGANDVGMLQE-----ADIGVGISGVEGMQAVMSSDIAIAQFRFLERLL 690 (978)
Q Consensus 641 ~v~aiGDG~ND~~ml~~-----AdvGI~i~g~e~~~a~~asD~vi~~f~~l~~ll 690 (978)
.++++||+.||..|++. +++||.|++... ...|++.+.+-..+..+|
T Consensus 322 ~pi~iGDD~TDedmF~~L~~~~~G~~I~Vgn~~~---~t~A~y~L~dp~eV~~~L 373 (384)
T PLN02580 322 LPIYIGDDRTDEDAFKVLREGNRGYGILVSSVPK---ESNAFYSLRDPSEVMEFL 373 (384)
T ss_pred eEEEECCCchHHHHHHhhhccCCceEEEEecCCC---CccceEEcCCHHHHHHHH
Confidence 25899999999999996 577887754222 236789888866555553
No 96
>PRK13225 phosphoglycolate phosphatase; Provisional
Probab=96.79 E-value=0.0061 Score=66.15 Aligned_cols=41 Identities=17% Similarity=0.182 Sum_probs=38.2
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCcc
Q 002029 489 KLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLL 529 (978)
Q Consensus 489 ~lr~~v~~~I~~L~~aGIkv~mlTGD~~~tA~~ia~~~gl~ 529 (978)
++.||+.++++.|++.|+++.++|+.....+..+-+..|+.
T Consensus 142 ~l~pg~~e~L~~L~~~gi~laIvSn~~~~~~~~~L~~~gl~ 182 (273)
T PRK13225 142 QLFPGVADLLAQLRSRSLCLGILSSNSRQNIEAFLQRQGLR 182 (273)
T ss_pred CcCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCCh
Confidence 57899999999999999999999999999999999888873
No 97
>PLN03243 haloacid dehalogenase-like hydrolase; Provisional
Probab=96.78 E-value=0.0056 Score=65.98 Aligned_cols=42 Identities=17% Similarity=0.097 Sum_probs=38.2
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCccc
Q 002029 489 KLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLR 530 (978)
Q Consensus 489 ~lr~~v~~~I~~L~~aGIkv~mlTGD~~~tA~~ia~~~gl~~ 530 (978)
++.+|+.++++.|++.|+++.++|+.....+..+-..+|+..
T Consensus 109 ~l~pg~~e~L~~L~~~g~~l~I~Tn~~~~~~~~~l~~~gl~~ 150 (260)
T PLN03243 109 RLRPGSREFVQALKKHEIPIAVASTRPRRYLERAIEAVGMEG 150 (260)
T ss_pred ccCCCHHHHHHHHHHCCCEEEEEeCcCHHHHHHHHHHcCCHh
Confidence 578999999999999999999999999999998888888743
No 98
>PF05116 S6PP: Sucrose-6F-phosphate phosphohydrolase; InterPro: IPR006380 This family of sequences represent sucrose phosphate phosphohydrolase (SPP) from plants and cyanobacteria []. SPP is a member of the Class IIB subfamily of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. SPP catalyzes the final step in the biosynthesis of sucrose, a critically important molecule for plants. Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain.; PDB: 1TJ5_A 2B1Q_A 1TJ4_A 1S2O_A 1U2T_A 2D2V_A 1TJ3_A 1U2S_A 2B1R_A 3GYG_B ....
Probab=96.74 E-value=0.0057 Score=65.43 Aligned_cols=162 Identities=15% Similarity=0.201 Sum_probs=81.0
Q ss_pred HHHcCCeEEEEcCCChhhHHHHHHHcCccccC------ceEEEEecCCCcccccchh-hhHHHHHHHHHHHHHHHHHhhh
Q 002029 501 LAQAGIKLWVLTGDKMETAINIGFACSLLRQG------MRQVIISSETPESKTLEKS-EDKSAAAAALKASVLHQLIRGK 573 (978)
Q Consensus 501 L~~aGIkv~mlTGD~~~tA~~ia~~~gl~~~~------~~~i~i~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~ 573 (978)
..+.++...++||++.+.+..+.++.++..++ +..+.. +. ....+ .=.+.+..........+.-...
T Consensus 31 ~~~~~~~~v~~TGRs~~~~~~~~~~~~l~~Pd~~I~svGt~I~~-~~-----~~~~d~~w~~~i~~~w~~~~v~~~l~~~ 104 (247)
T PF05116_consen 31 QARPEILFVYVTGRSLESVLRLLREYNLPQPDYIITSVGTEIYY-GE-----NWQPDEEWQAHIDERWDRERVEEILAEL 104 (247)
T ss_dssp HHCCGEEEEEE-SS-HHHHHHHHHHCT-EE-SEEEETTTTEEEE-SS-----TTEE-HHHHHHHHTT--HHHHHHHHHCH
T ss_pred hhCCCceEEEECCCCHHHHHHHHHhCCCCCCCEEEecCCeEEEE-cC-----CCcChHHHHHHHHhcCChHHHHHHHHHh
Confidence 44788999999999999999999999985543 222222 11 11111 1111111111111111111111
Q ss_pred hhhcc---ccCCCCCeEEEEcCchhhhhchhhHHHHHHHHHhccCee----EEEeCCc--hhHHHHHHHHHccCC---Ce
Q 002029 574 ELLDS---SNESLGPLALIIDGKSLTYALEDDVKDLFLELAIGCASV----ICCRSSP--KQKALVTRLVKTKTS---ST 641 (978)
Q Consensus 574 ~~~~~---~~~~~~~~~lvi~G~~l~~~~~~~~~~~f~~l~~~~~~v----i~~r~sP--~qK~~iV~~lk~~~~---~~ 641 (978)
..+.. ........+..++.......+ +++...+..-...++.+ -+..+-| ..|...|+.++++.+ ..
T Consensus 105 ~~l~~q~~~~q~~~k~sy~~~~~~~~~~~-~~i~~~l~~~~l~~~~i~s~~~~ldilP~~a~K~~Al~~L~~~~~~~~~~ 183 (247)
T PF05116_consen 105 PGLRPQPESEQRPFKISYYVDPDDSADIL-EEIRARLRQRGLRVNVIYSNGRDLDILPKGASKGAALRYLMERWGIPPEQ 183 (247)
T ss_dssp CCEEEGGCCCGCCTCECEEEETTSHCHHH-HHHHHHHHCCTCEEEEEECTCCEEEEEETT-SHHHHHHHHHHHHT--GGG
T ss_pred hCcccCCccccCCeeEEEEEecccchhHH-HHHHHHHHHcCCCeeEEEccceeEEEccCCCCHHHHHHHHHHHhCCCHHH
Confidence 11111 111223444455554433212 23333333222222211 1223444 379999999998643 57
Q ss_pred EEEEcCCcCCHHHhhhccccccccCCcc
Q 002029 642 TLAIGDGANDVGMLQEADIGVGISGVEG 669 (978)
Q Consensus 642 v~aiGDG~ND~~ml~~AdvGI~i~g~e~ 669 (978)
|+++||+.||.+||..++-||.+.+.+.
T Consensus 184 vl~aGDSgND~~mL~~~~~~vvV~Na~~ 211 (247)
T PF05116_consen 184 VLVAGDSGNDLEMLEGGDHGVVVGNAQP 211 (247)
T ss_dssp EEEEESSGGGHHHHCCSSEEEE-TTS-H
T ss_pred EEEEeCCCCcHHHHcCcCCEEEEcCCCH
Confidence 8899999999999999999998866544
No 99
>PRK11590 hypothetical protein; Provisional
Probab=96.73 E-value=0.0068 Score=63.29 Aligned_cols=111 Identities=14% Similarity=0.083 Sum_probs=76.6
Q ss_pred ccCCChHHHH-HHHHHcCCeEEEEcCCChhhHHHHHHHcCccccCceEEEEecCCCcccccchhhhHHHHHHHHHHHHHH
Q 002029 489 KLQNGVPECI-DKLAQAGIKLWVLTGDKMETAINIGFACSLLRQGMRQVIISSETPESKTLEKSEDKSAAAAALKASVLH 567 (978)
Q Consensus 489 ~lr~~v~~~I-~~L~~aGIkv~mlTGD~~~tA~~ia~~~gl~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 567 (978)
.+.|++.++| +.+++.|++++++|+-....+..++...|+.. ...++...-+
T Consensus 95 ~~~pga~e~L~~~l~~~G~~l~IvSas~~~~~~~il~~l~~~~-~~~~i~t~l~-------------------------- 147 (211)
T PRK11590 95 TAFPVVQERLTTYLLSSDADVWLITGSPQPLVEQVYFDTPWLP-RVNLIASQMQ-------------------------- 147 (211)
T ss_pred cCCccHHHHHHHHHHhCCCEEEEEeCCcHHHHHHHHHHccccc-cCceEEEEEE--------------------------
Confidence 5589999999 57888999999999999999999999988632 1122211100
Q ss_pred HHHhhhhhhccccCCCCCeEEEEcCchhhhhchhhHHHHHHHHHhccCeeEEEeCCchhHHHHHHHHHccCCCeEEEEcC
Q 002029 568 QLIRGKELLDSSNESLGPLALIIDGKSLTYALEDDVKDLFLELAIGCASVICCRSSPKQKALVTRLVKTKTSSTTLAIGD 647 (978)
Q Consensus 568 ~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~f~~l~~~~~~vi~~r~sP~qK~~iV~~lk~~~~~~v~aiGD 647 (978)
...+|. +....|..+.|..-++..-........+-||
T Consensus 148 --------------------~~~tg~-----------------------~~g~~c~g~~K~~~l~~~~~~~~~~~~aY~D 184 (211)
T PRK11590 148 --------------------RRYGGW-----------------------VLTLRCLGHEKVAQLERKIGTPLRLYSGYSD 184 (211)
T ss_pred --------------------EEEccE-----------------------ECCccCCChHHHHHHHHHhCCCcceEEEecC
Confidence 011111 1122355678877666432213456789999
Q ss_pred CcCCHHHhhhccccccccCCcc
Q 002029 648 GANDVGMLQEADIGVGISGVEG 669 (978)
Q Consensus 648 G~ND~~ml~~AdvGI~i~g~e~ 669 (978)
+.||.|||+.|+.++.++....
T Consensus 185 s~~D~pmL~~a~~~~~vnp~~~ 206 (211)
T PRK11590 185 SKQDNPLLYFCQHRWRVTPRGE 206 (211)
T ss_pred CcccHHHHHhCCCCEEECccHH
Confidence 9999999999999999866543
No 100
>TIGR00685 T6PP trehalose-phosphatase. At least 18 distinct sequences from Arabidopsis have been identified, roughly half of these are of the fungal type, with a fused synthase and half are like the bacterial members having only the phosphatase domain. It has been suggested that trehalose is being used in Arabidopsis as a regulatory molecule in development and possibly other processes.
Probab=96.73 E-value=0.02 Score=61.26 Aligned_cols=66 Identities=11% Similarity=0.097 Sum_probs=48.0
Q ss_pred eCCchhHHHHHHHHHccCC---CeEEEEcCCcCCHHHhhhc--------cccccccCCccchhccccceehhchhhhHHH
Q 002029 621 RSSPKQKALVTRLVKTKTS---STTLAIGDGANDVGMLQEA--------DIGVGISGVEGMQAVMSSDIAIAQFRFLERL 689 (978)
Q Consensus 621 r~sP~qK~~iV~~lk~~~~---~~v~aiGDG~ND~~ml~~A--------dvGI~i~g~e~~~a~~asD~vi~~f~~l~~l 689 (978)
+..+.+|+..++.+.+..+ ..++++||+.||..|++.+ ..||.+. ++. .+..|++++.+...+..+
T Consensus 162 ~p~~~~Kg~a~~~~~~~~~~~~~~~i~iGD~~~D~~~~~~~~~~~~~~g~~~v~v~--~g~-~~~~A~~~~~~~~~v~~~ 238 (244)
T TIGR00685 162 KPRFVNKGEIVKRLLWHQPGSGISPVYLGDDITDEDAFRVVNNQWGNYGFYPVPIG--SGS-KKTVAKFHLTGPQQVLEF 238 (244)
T ss_pred eeCCCCHHHHHHHHHHhcccCCCceEEEcCCCcHHHHHHHHhcccCCCCeEEEEEe--cCC-cCCCceEeCCCHHHHHHH
Confidence 3445589988888765433 5799999999999999999 3566663 121 456789999987765554
No 101
>PRK10826 2-deoxyglucose-6-phosphatase; Provisional
Probab=96.62 E-value=0.0063 Score=64.08 Aligned_cols=42 Identities=17% Similarity=0.173 Sum_probs=38.3
Q ss_pred cccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCcc
Q 002029 488 DKLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLL 529 (978)
Q Consensus 488 D~lr~~v~~~I~~L~~aGIkv~mlTGD~~~tA~~ia~~~gl~ 529 (978)
-++.||+.++++.|++.|+++.++||.....+..+.+..|+.
T Consensus 91 ~~~~~g~~~~l~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~ 132 (222)
T PRK10826 91 RPLLPGVREALALCKAQGLKIGLASASPLHMLEAVLTMFDLR 132 (222)
T ss_pred CCCCCCHHHHHHHHHHCCCeEEEEeCCcHHHHHHHHHhCcch
Confidence 468899999999999999999999999999998888888864
No 102
>PLN02205 alpha,alpha-trehalose-phosphate synthase [UDP-forming]
Probab=96.49 E-value=0.078 Score=66.39 Aligned_cols=203 Identities=11% Similarity=0.093 Sum_probs=101.5
Q ss_pred cccEEEEEEeeccccCCChHHHHHHH-HHcCCeEEEEcCCChhhHHHHHHH---cCccccCceEEEEecCCCcccccchh
Q 002029 476 KNLILLGATAVEDKLQNGVPECIDKL-AQAGIKLWVLTGDKMETAINIGFA---CSLLRQGMRQVIISSETPESKTLEKS 551 (978)
Q Consensus 476 ~dl~llG~i~ieD~lr~~v~~~I~~L-~~aGIkv~mlTGD~~~tA~~ia~~---~gl~~~~~~~i~i~~~~~~~~~~~~~ 551 (978)
-|.||+-.....-.+-+++.+++++| ++.|+.++++||+...+....... ++++.+++..+...+...-.. ....
T Consensus 603 yDGTLlp~~~~~~~p~~~~~~~L~~L~~d~g~~VaIvSGR~~~~L~~~f~~~~~l~laaEHG~~ir~~~~~~w~~-~~~~ 681 (854)
T PLN02205 603 YDGTLMPQASIDKSPSSKSIDILNTLCRDKNNMVFIVSARSRKTLADWFSPCEKLGIAAEHGYFLRLKRDVEWET-CVPV 681 (854)
T ss_pred cCCcccCCccccCCCCHHHHHHHHHHHhcCCCEEEEEeCCCHHHHHHHhCCCCCeEEEEeCCEEEEeCCCceeee-cchh
Confidence 35555533222224556888999997 778999999999999999887754 456766665544332211100 0000
Q ss_pred hhHHHHHHHHHHHHHHHHHhhhhhhccccCCCCCeEEEEcCchhh----hhchhhHHHHHHHHHhccCeeE-----EEeC
Q 002029 552 EDKSAAAAALKASVLHQLIRGKELLDSSNESLGPLALIIDGKSLT----YALEDDVKDLFLELAIGCASVI-----CCRS 622 (978)
Q Consensus 552 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~----~~~~~~~~~~f~~l~~~~~~vi-----~~r~ 622 (978)
.. ....+. ...+...+.. ....+.-.....+++..-...+ .....++..++..........+ +..+
T Consensus 682 ~~-~~w~~~-v~~i~~~y~e---rtpGs~IE~K~~slv~HyR~adpd~~~~qa~el~~~l~~~l~~~~~~v~~G~~vvEV 756 (854)
T PLN02205 682 AD-CSWKQI-AEPVMQLYTE---TTDGSTIEDKETALVWCYEDADPDFGSCQAKELLDHLESVLANEPVTVKSGQNIVEV 756 (854)
T ss_pred hh-HHHHHH-HHHHHHHHhc---CCCchhheecceEEEEehhhCChHHhhhhhHHHHHHHHHHHhcCceEEEECCcEEEE
Confidence 00 000000 0111111110 0011111122344444332221 1111233344433322111111 1223
Q ss_pred Cch--hHHHHHHHHHcc---CC---CeEEEEcCCcCCHHHhhhcc--------------ccccccCCccchhccccceeh
Q 002029 623 SPK--QKALVTRLVKTK---TS---STTLAIGDGANDVGMLQEAD--------------IGVGISGVEGMQAVMSSDIAI 680 (978)
Q Consensus 623 sP~--qK~~iV~~lk~~---~~---~~v~aiGDG~ND~~ml~~Ad--------------vGI~i~g~e~~~a~~asD~vi 680 (978)
.|. .|+..++.+.+. .| ..++++||+.||..|++.++ ++|.+..+ ...|.+-+
T Consensus 757 ~p~gvnKG~Al~~Ll~~~~~~g~~~d~vl~~GDD~nDedMF~~~~~~~~g~~~~~~~~~~~v~VG~~-----~S~A~y~L 831 (854)
T PLN02205 757 KPQGVSKGLVAKRLLSIMQERGMLPDFVLCIGDDRSDEDMFEVITSSMAGPSIAPRAEVFACTVGQK-----PSKAKYYL 831 (854)
T ss_pred EeCCCCHHHHHHHHHHHHHhcCCCcccEEEEcCCccHHHHHHHhhhhccCCcccccccceeEEECCC-----CccCeEec
Confidence 343 799999887531 23 47999999999999999886 33333221 23567777
Q ss_pred hchhhhHHH
Q 002029 681 AQFRFLERL 689 (978)
Q Consensus 681 ~~f~~l~~l 689 (978)
.+-..+..+
T Consensus 832 ~d~~eV~~l 840 (854)
T PLN02205 832 DDTAEIVRL 840 (854)
T ss_pred CCHHHHHHH
Confidence 776555555
No 103
>PRK11587 putative phosphatase; Provisional
Probab=96.41 E-value=0.012 Score=61.78 Aligned_cols=40 Identities=20% Similarity=0.201 Sum_probs=33.2
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCc
Q 002029 489 KLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSL 528 (978)
Q Consensus 489 ~lr~~v~~~I~~L~~aGIkv~mlTGD~~~tA~~ia~~~gl 528 (978)
++.||+.++++.|+++|+++.++|+.....+...-...|+
T Consensus 83 ~~~pg~~e~L~~L~~~g~~~~ivTn~~~~~~~~~l~~~~l 122 (218)
T PRK11587 83 TALPGAIALLNHLNKLGIPWAIVTSGSVPVASARHKAAGL 122 (218)
T ss_pred eeCcCHHHHHHHHHHcCCcEEEEcCCCchHHHHHHHhcCC
Confidence 5789999999999999999999999887766555555554
No 104
>COG4030 Uncharacterized protein conserved in archaea [Function unknown]
Probab=96.28 E-value=0.015 Score=58.33 Aligned_cols=159 Identities=18% Similarity=0.197 Sum_probs=90.6
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCccccCceEEEEecCCCcccccchhhhHHHHHHHHHHHHHHH
Q 002029 489 KLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQGMRQVIISSETPESKTLEKSEDKSAAAAALKASVLHQ 568 (978)
Q Consensus 489 ~lr~~v~~~I~~L~~aGIkv~mlTGD~~~tA~~ia~~~gl~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 568 (978)
++-||+.++++.|++. ...+++|---..-+..+|..+|+...+.....++-++... ..++. +.+...
T Consensus 83 ~lvPgA~etm~~l~~~-~tp~v~STSY~qy~~r~a~~ig~Prg~~~~Te~~lD~~~~---PeeeR---------~E~L~~ 149 (315)
T COG4030 83 KLVPGAEETMATLQER-WTPVVISTSYTQYLRRTASMIGVPRGELHGTEVDLDSIAV---PEEER---------EELLSI 149 (315)
T ss_pred ccCCChHHHHHHHhcc-CCceEEeccHHHHHHHHHHhcCCCccccccccccCccccC---ChHHH---------HHHHHh
Confidence 5679999999998764 5666777777788889999999855543322222221111 11111 111111
Q ss_pred HHhhhhhhccccCCCCCeEEEEcCchhhhhchhhH----HHHHHHHHhccCeeEEEeCCchhHHHHHHHHHccCC--CeE
Q 002029 569 LIRGKELLDSSNESLGPLALIIDGKSLTYALEDDV----KDLFLELAIGCASVICCRSSPKQKALVTRLVKTKTS--STT 642 (978)
Q Consensus 569 ~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~~~~~~----~~~f~~l~~~~~~vi~~r~sP~qK~~iV~~lk~~~~--~~v 642 (978)
+ ...-.++|++|-.-+++-+ .....+++...++|-. ..|+++++.+-+..+ ...
T Consensus 150 ~---------------~~~~~~~geelfe~lDe~F~rLip~E~gki~~~vk~VGg-----g~ka~i~e~~~ele~~d~sa 209 (315)
T COG4030 150 I---------------DVIASLSGEELFEKLDELFSRLIPSEVGKIVESVKAVGG-----GEKAKIMEGYCELEGIDFSA 209 (315)
T ss_pred c---------------CccccccHHHHHHHHHHHHhhcCHHHHHHHHHhhhhccC-----cchhHHHHHHHhhcCCCcce
Confidence 1 0011455554433222210 0112223322332211 457777777665422 346
Q ss_pred EEEcCCcCCHHHhhhcc----ccccccCCccchhccccceehhc
Q 002029 643 LAIGDGANDVGMLQEAD----IGVGISGVEGMQAVMSSDIAIAQ 682 (978)
Q Consensus 643 ~aiGDG~ND~~ml~~Ad----vGI~i~g~e~~~a~~asD~vi~~ 682 (978)
+.+||+..|+.||+++. +.|+..|++= |..-||+.+..
T Consensus 210 ~~VGDSItDv~ml~~~rgrGglAvaFNGNeY--al~eAdVAvis 251 (315)
T COG4030 210 VVVGDSITDVKMLEAARGRGGLAVAFNGNEY--ALKEADVAVIS 251 (315)
T ss_pred eEecCcccchHHHHHhhccCceEEEecCCcc--cccccceEEec
Confidence 88999999999999884 5567788876 78889988876
No 105
>TIGR01422 phosphonatase phosphonoacetaldehyde hydrolase. This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases (pfam00702), and contains a modified version of the conserved catalytic motifs of that superfamily: the first motif is usually DxDx(T/V), here it is DxAxT, and in the third motif the normal conserved lysine is instead an arginine. Additionally, the enzyme contains a unique conserved catalytic lysine (B. cereus pos. 53) which is involved in the binding and activation of the substrate through the formation of a Schiff base. The substrate of this enzyme is the product of 2-aminoethylphosphonate (AEP) transaminase, phosphonoacetaldehyde. This degradation pathway for AEP may be related to its toxic properties which are utilized by microorganisms as a chemical warfare agent.
Probab=96.21 E-value=0.02 Score=61.67 Aligned_cols=41 Identities=29% Similarity=0.208 Sum_probs=37.0
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCcc
Q 002029 489 KLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLL 529 (978)
Q Consensus 489 ~lr~~v~~~I~~L~~aGIkv~mlTGD~~~tA~~ia~~~gl~ 529 (978)
++.||+.++++.|+++|+++.++||.....+..+-+..|+.
T Consensus 99 ~~~pg~~e~L~~L~~~g~~l~IvT~~~~~~~~~~l~~~gl~ 139 (253)
T TIGR01422 99 SPIPGVIEVIAYLRARGIKIGSTTGYTREMMDVVAPEAALQ 139 (253)
T ss_pred ccCCCHHHHHHHHHHCCCeEEEECCCcHHHHHHHHHHHHhc
Confidence 46799999999999999999999999999888888887764
No 106
>PLN02575 haloacid dehalogenase-like hydrolase
Probab=96.15 E-value=0.023 Score=63.92 Aligned_cols=41 Identities=17% Similarity=0.159 Sum_probs=38.1
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCcc
Q 002029 489 KLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLL 529 (978)
Q Consensus 489 ~lr~~v~~~I~~L~~aGIkv~mlTGD~~~tA~~ia~~~gl~ 529 (978)
++.+|+.++++.|+++|+++.++|+-....+..+-+..||.
T Consensus 216 ~l~pGa~ElL~~Lk~~GiklaIaSn~~~~~~~~~L~~lgL~ 256 (381)
T PLN02575 216 RLRTGSQEFVNVLMNYKIPMALVSTRPRKTLENAIGSIGIR 256 (381)
T ss_pred CcCcCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCCH
Confidence 47899999999999999999999999999999999888874
No 107
>TIGR03351 PhnX-like phosphonatase-like hydrolase. This clade of sequences are the closest homologs to the PhnX enzyme, phosphonoacetaldehyde (Pald) hydrolase (phosphonatase, TIGR01422). This phosphonatase-like enzyme and PhnX itself are members of the haloacid dehalogenase (HAD) superfamily (pfam00702) having a a number of distinctive features that set them apart from typical HAD enzymes. The typical HAD N-terminal motif DxDx(T/V) here is DxAGT and the usual conserved lysine prior to the C-terminal motif is instead an arginine. Also distinctive of phosphonatase, and particular to its bi-catalytic mechanism is a conserved lysine in the variable "cap" domain. This lysine forms a Schiff base with the aldehyde of phosphonoacetaldehyde, providing, through the resulting positive charge, a polarization of the C-P bond necesary for cleavage as well as a route to the initial product of cleavage, an ene-amine. The conservation of these elements in this phosphonatase-like enzyme suggests that the
Probab=96.15 E-value=0.02 Score=60.14 Aligned_cols=42 Identities=24% Similarity=0.175 Sum_probs=38.8
Q ss_pred cccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCcc
Q 002029 488 DKLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLL 529 (978)
Q Consensus 488 D~lr~~v~~~I~~L~~aGIkv~mlTGD~~~tA~~ia~~~gl~ 529 (978)
.++.+|+++.++.|++.|+++.++||-....+..+.+..|+.
T Consensus 86 ~~l~~G~~~~L~~L~~~g~~~~ivT~~~~~~~~~~l~~~~l~ 127 (220)
T TIGR03351 86 PVALPGAEEAFRSLRSSGIKVALTTGFDRDTAERLLEKLGWT 127 (220)
T ss_pred CccCCCHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHhhhh
Confidence 479999999999999999999999999999999988888874
No 108
>PRK13478 phosphonoacetaldehyde hydrolase; Provisional
Probab=96.12 E-value=0.037 Score=60.08 Aligned_cols=40 Identities=28% Similarity=0.158 Sum_probs=35.0
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCc
Q 002029 489 KLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSL 528 (978)
Q Consensus 489 ~lr~~v~~~I~~L~~aGIkv~mlTGD~~~tA~~ia~~~gl 528 (978)
++-||+.++++.|++.|+++.++||.....+..+-+..|+
T Consensus 101 ~~~pg~~elL~~L~~~g~~l~I~T~~~~~~~~~~l~~~~l 140 (267)
T PRK13478 101 TPIPGVLEVIAALRARGIKIGSTTGYTREMMDVVVPLAAA 140 (267)
T ss_pred CCCCCHHHHHHHHHHCCCEEEEEcCCcHHHHHHHHHHHhh
Confidence 5789999999999999999999999999887777666665
No 109
>TIGR01672 AphA HAD superfamily (subfamily IIIB) phosphatase, TIGR01672. Supporting evidence for the inclusion in the HAD superfamily, whose phosphatase members are magnesium dependent, is the inhibition by EDTA and calcium ions, and stimulation by magnesium ion.
Probab=96.09 E-value=0.011 Score=62.20 Aligned_cols=41 Identities=12% Similarity=0.127 Sum_probs=35.6
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEcCC----ChhhHHHHHHHcCcc
Q 002029 489 KLQNGVPECIDKLAQAGIKLWVLTGD----KMETAINIGFACSLL 529 (978)
Q Consensus 489 ~lr~~v~~~I~~L~~aGIkv~mlTGD----~~~tA~~ia~~~gl~ 529 (978)
.+.+++++.++.+++.|+++.++|+. ...++..+.+..|+.
T Consensus 114 ~p~~~a~elL~~l~~~G~~i~iVTnr~~~k~~~~a~~ll~~lGi~ 158 (237)
T TIGR01672 114 IPKEVARQLIDMHQRRGDAIFFVTGRTPGKTDTVSKTLAKNFHIP 158 (237)
T ss_pred cchhHHHHHHHHHHHCCCEEEEEeCCCCCcCHHHHHHHHHHhCCc
Confidence 45556999999999999999999998 667899998888883
No 110
>PLN03017 trehalose-phosphatase
Probab=95.96 E-value=0.41 Score=53.45 Aligned_cols=207 Identities=10% Similarity=0.022 Sum_probs=103.1
Q ss_pred ccEEEEEEeecc--ccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHc--CccccCceEEEEecCCCcccc-----
Q 002029 477 NLILLGATAVED--KLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFAC--SLLRQGMRQVIISSETPESKT----- 547 (978)
Q Consensus 477 dl~llG~i~ieD--~lr~~v~~~I~~L~~aGIkv~mlTGD~~~tA~~ia~~~--gl~~~~~~~i~i~~~~~~~~~----- 547 (978)
|.||+-++.-.| .+-++..++|++|. .|++++++||+..........-. .++..++..+.-.........
T Consensus 119 DGTL~Piv~~p~~a~i~~~~~~aL~~La-~~~~vaIvSGR~~~~l~~~~~l~~l~l~g~hGa~i~~p~~~~~~~~~~~~~ 197 (366)
T PLN03017 119 DGTLSPIVDDPDKAFMSSKMRRTVKKLA-KCFPTAIVTGRCIDKVYNFVKLAELYYAGSHGMDIKGPAKGFSRHKRVKQS 197 (366)
T ss_pred CCcCcCCcCCcccccCCHHHHHHHHHHh-cCCcEEEEeCCCHHHHHHhhcccCceEEEcCCcEEecCCCcceeccccccc
Confidence 566665554333 36788999999999 78999999999999998873221 122222222211110000000
Q ss_pred cchhhhHHHHHHHHHHHHHHHHHhhhhhhccccCCCCCeEEEEcCchhhhhchhhHHHHHHHHHhccC------eeEEEe
Q 002029 548 LEKSEDKSAAAAALKASVLHQLIRGKELLDSSNESLGPLALIIDGKSLTYALEDDVKDLFLELAIGCA------SVICCR 621 (978)
Q Consensus 548 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~f~~l~~~~~------~vi~~r 621 (978)
...+.... .. ...+.+...+...........-+.+.+++.+.-.......-.++..++..++.... .--..+
T Consensus 198 ~~~~~~~~-~~-~~i~~v~~~L~~~~~~~pGa~VE~K~~~vavHyR~ad~~~~~~l~~~~~~vl~~~~~l~v~~GkkVlE 275 (366)
T PLN03017 198 LLYQPAND-YL-PMIDEVYRQLLEKTKSTPGAKVENHKFCASVHFRCVDEKKWSELVLQVRSVLKNFPTLKLTQGRKVFE 275 (366)
T ss_pred cccccchh-hH-HHHHHHHHHHHHHHhcCCCCEEEecCcEEEEEcCcCCHHHHHHHHHHHHHHHHhCCCcEEeCCCeEEE
Confidence 00000000 00 01112222222222222222223344555554433322111223333333322221 112233
Q ss_pred CCc---hhHHHHHHHHHccCC------CeEEEEcCCcCCHHHhhhcc-----ccccccCCccchhccccceehhchhhhH
Q 002029 622 SSP---KQKALVTRLVKTKTS------STTLAIGDGANDVGMLQEAD-----IGVGISGVEGMQAVMSSDIAIAQFRFLE 687 (978)
Q Consensus 622 ~sP---~qK~~iV~~lk~~~~------~~v~aiGDG~ND~~ml~~Ad-----vGI~i~g~e~~~a~~asD~vi~~f~~l~ 687 (978)
+.| -+|+..|+.+.+..+ ..++++||...|-.|++... +||.++...+ ...|++.+.+-..+.
T Consensus 276 vRP~~~~dKG~Av~~LL~~l~~~~~~~~~pvyiGDD~TDEDaF~~L~~~~~G~gI~VG~~~k---~T~A~y~L~dp~eV~ 352 (366)
T PLN03017 276 IRPMIEWDKGKALEFLLESLGFGNTNNVFPVYIGDDRTDEDAFKMLRDRGEGFGILVSKFPK---DTDASYSLQDPSEVM 352 (366)
T ss_pred ecCCCCCCHHHHHHHHHHhcccccCCCceEEEeCCCCccHHHHHHHhhcCCceEEEECCCCC---CCcceEeCCCHHHHH
Confidence 444 399999998876432 36899999999999998763 4444432121 246889888855544
Q ss_pred HH
Q 002029 688 RL 689 (978)
Q Consensus 688 ~l 689 (978)
.+
T Consensus 353 ~f 354 (366)
T PLN03017 353 DF 354 (366)
T ss_pred HH
Confidence 44
No 111
>TIGR01548 HAD-SF-IA-hyp1 haloacid dehalogenase superfamily, subfamily IA hydrolase, TIGR01548. All but the Halobacterium sequence currently found are annotated as "Imidazoleglycerol-phosphate dehydratase", however, the source of the annotation could not be traced and significant homology could not be found between any of these sequences and known IGPD's.
Probab=95.94 E-value=0.025 Score=58.34 Aligned_cols=43 Identities=21% Similarity=0.108 Sum_probs=38.8
Q ss_pred ccccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCcc
Q 002029 487 EDKLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLL 529 (978)
Q Consensus 487 eD~lr~~v~~~I~~L~~aGIkv~mlTGD~~~tA~~ia~~~gl~ 529 (978)
.+++.++++++++.|++.|+++.++||-....+..+.+..|+-
T Consensus 104 ~~~~~~~~~~~L~~l~~~g~~~~i~T~~~~~~~~~~l~~~gl~ 146 (197)
T TIGR01548 104 EDETLLTPKGLLRELHRAPKGMAVVTGRPRKDAAKFLTTHGLE 146 (197)
T ss_pred ccccccCHHHHHHHHHHcCCcEEEECCCCHHHHHHHHHHcCch
Confidence 4567788899999999999999999999999999999998874
No 112
>COG3769 Predicted hydrolase (HAD superfamily) [General function prediction only]
Probab=95.92 E-value=0.16 Score=51.09 Aligned_cols=48 Identities=6% Similarity=0.155 Sum_probs=38.7
Q ss_pred ChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCc-----cccCceEEEEec
Q 002029 493 GVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSL-----LRQGMRQVIISS 540 (978)
Q Consensus 493 ~v~~~I~~L~~aGIkv~mlTGD~~~tA~~ia~~~gl-----~~~~~~~i~i~~ 540 (978)
.+.+.+..|+++|+.|+..|.-...-....-+++|+ +.+++..+.+..
T Consensus 27 pA~pv~~el~d~G~~Vi~~SSKT~aE~~~l~~~l~v~~~p~iaEnG~aI~~p~ 79 (274)
T COG3769 27 PAAPVLLELKDAGVPVILCSSKTRAEMLYLQKSLGVQGLPLIAENGAAIYLPK 79 (274)
T ss_pred ccchHHHHHHHcCCeEEEeccchHHHHHHHHHhcCCCCCceeecCCceEEecc
Confidence 467899999999999999999998888888888886 455666665543
No 113
>PRK06769 hypothetical protein; Validated
Probab=95.86 E-value=0.047 Score=54.93 Aligned_cols=41 Identities=20% Similarity=0.215 Sum_probs=31.2
Q ss_pred cccEEEEEEeecc----ccCCChHHHHHHHHHcCCeEEEEcCCCh
Q 002029 476 KNLILLGATAVED----KLQNGVPECIDKLAQAGIKLWVLTGDKM 516 (978)
Q Consensus 476 ~dl~llG~i~ieD----~lr~~v~~~I~~L~~aGIkv~mlTGD~~ 516 (978)
.|.++.|-..+.+ ++.||++++++.|++.|+++.++|+...
T Consensus 11 ~d~~~~~~~~~~~~~~~~~~pgv~e~L~~Lk~~G~~l~I~Tn~~~ 55 (173)
T PRK06769 11 RDGTIGGDTTIHYPGSFTLFPFTKASLQKLKANHIKIFSFTNQPG 55 (173)
T ss_pred CCCcccCCCCCCCHHHeEECCCHHHHHHHHHHCCCEEEEEECCch
Confidence 3555555544332 2689999999999999999999998763
No 114
>smart00775 LNS2 LNS2 domain. This domain is found in Saccharomyces cerevisiae protein SMP2, proteins with an N-terminal lipin domain and phosphatidylinositol transfer proteins. SMP2 is involved in plasmid maintenance and respiration. Lipin proteins are involved in adipose tissue development and insulin resistance.
Probab=95.83 E-value=0.051 Score=53.65 Aligned_cols=34 Identities=24% Similarity=0.300 Sum_probs=31.6
Q ss_pred ccccCCChHHHHHHHHHcCCeEEEEcCCChhhHH
Q 002029 487 EDKLQNGVPECIDKLAQAGIKLWVLTGDKMETAI 520 (978)
Q Consensus 487 eD~lr~~v~~~I~~L~~aGIkv~mlTGD~~~tA~ 520 (978)
+|.+.+++.+++++++++|++++++||+....+.
T Consensus 25 ~~~~~~~~~~a~~~l~~~G~~ivy~TGRp~~~~~ 58 (157)
T smart00775 25 KDWTHPGVAKLYRDIQNNGYKILYLTARPIGQAD 58 (157)
T ss_pred cCcCCHHHHHHHHHHHHcCCeEEEEcCCcHHHHH
Confidence 5788999999999999999999999999988874
No 115
>PRK06698 bifunctional 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase/phosphatase; Validated
Probab=95.66 E-value=0.06 Score=63.38 Aligned_cols=41 Identities=15% Similarity=0.087 Sum_probs=38.3
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCcc
Q 002029 489 KLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLL 529 (978)
Q Consensus 489 ~lr~~v~~~I~~L~~aGIkv~mlTGD~~~tA~~ia~~~gl~ 529 (978)
++.||+.++++.|++.|+++.++|+-....+..+...+|+.
T Consensus 330 ~l~pG~~e~L~~Lk~~g~~l~IvS~~~~~~~~~~l~~~~l~ 370 (459)
T PRK06698 330 ALYPNVKEIFTYIKENNCSIYIASNGLTEYLRAIVSYYDLD 370 (459)
T ss_pred CcCCCHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHCCcH
Confidence 68899999999999999999999999999999998888874
No 116
>TIGR01662 HAD-SF-IIIA HAD-superfamily hydrolase, subfamily IIIA. In the case of histidinol phosphatase and PNK-3'-phosphatase, this model represents a domain of a bifunctional system. In the histidinol phosphatase HisB, a C-terminal domain is an imidazoleglycerol-phosphate dehydratase which catalyzes a related step in histidine biosynthesis. In PNK-3'-phosphatase, N- and C-terminal domains constitute the polynucleotide kinase and DNA-binding components of the enzyme.
Probab=95.61 E-value=0.054 Score=51.75 Aligned_cols=41 Identities=20% Similarity=0.230 Sum_probs=35.2
Q ss_pred cccCCChHHHHHHHHHcCCeEEEEcCCC--------hhhHHHHHHHcCc
Q 002029 488 DKLQNGVPECIDKLAQAGIKLWVLTGDK--------METAINIGFACSL 528 (978)
Q Consensus 488 D~lr~~v~~~I~~L~~aGIkv~mlTGD~--------~~tA~~ia~~~gl 528 (978)
-++.+++.++++.|+++|+++.++|+.. .+.+..+.+..|+
T Consensus 24 ~~~~~~v~~~l~~L~~~g~~l~i~Sn~~~~~~~~~~~~~~~~~l~~~~l 72 (132)
T TIGR01662 24 RILYPEVPDALAELKEAGYKVVIVTNQSGIGRGKFSSGRVARRLEELGV 72 (132)
T ss_pred heeCCCHHHHHHHHHHCCCEEEEEECCccccccHHHHHHHHHHHHHCCC
Confidence 3678999999999999999999999988 6667777777766
No 117
>TIGR02253 CTE7 HAD superfamily (subfamily IA) hydrolase, TIGR02253. This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549).
Probab=95.60 E-value=0.051 Score=57.00 Aligned_cols=40 Identities=15% Similarity=0.168 Sum_probs=35.9
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCc
Q 002029 489 KLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSL 528 (978)
Q Consensus 489 ~lr~~v~~~I~~L~~aGIkv~mlTGD~~~tA~~ia~~~gl 528 (978)
++.||+.++++.|++.|++++++|+-....+....+..|+
T Consensus 94 ~~~~g~~~~L~~L~~~g~~~~i~Tn~~~~~~~~~l~~~~l 133 (221)
T TIGR02253 94 RVYPGVRDTLMELRESGYRLGIITDGLPVKQWEKLERLGV 133 (221)
T ss_pred CCCCCHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHhCCh
Confidence 5789999999999999999999999988878777777776
No 118
>PLN02779 haloacid dehalogenase-like hydrolase family protein
Probab=95.45 E-value=0.05 Score=59.57 Aligned_cols=38 Identities=26% Similarity=0.265 Sum_probs=32.2
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHc
Q 002029 489 KLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFAC 526 (978)
Q Consensus 489 ~lr~~v~~~I~~L~~aGIkv~mlTGD~~~tA~~ia~~~ 526 (978)
++.||+.++++.|++.|+++.++|+-....+..+-...
T Consensus 144 ~l~pGv~elL~~L~~~g~~l~IvTn~~~~~~~~~l~~~ 181 (286)
T PLN02779 144 PLRPGVLRLMDEALAAGIKVAVCSTSNEKAVSKIVNTL 181 (286)
T ss_pred CchhhHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHh
Confidence 57899999999999999999999998877776554443
No 119
>PRK11009 aphA acid phosphatase/phosphotransferase; Provisional
Probab=95.43 E-value=0.036 Score=58.47 Aligned_cols=41 Identities=12% Similarity=0.167 Sum_probs=35.3
Q ss_pred cccCCChHHHHHHHHHcCCeEEEEcCCC----hhhHHHHHHHcCc
Q 002029 488 DKLQNGVPECIDKLAQAGIKLWVLTGDK----METAINIGFACSL 528 (978)
Q Consensus 488 D~lr~~v~~~I~~L~~aGIkv~mlTGD~----~~tA~~ia~~~gl 528 (978)
-.+.+++.+.++.|++.|+++.++||+. ..|+.++.+..|+
T Consensus 113 a~p~~Ga~elL~~L~~~G~~I~iVTnR~~~k~~~t~~~Llk~~gi 157 (237)
T PRK11009 113 SIPKEVARQLIDMHVKRGDSIYFITGRTATKTETVSKTLADDFHI 157 (237)
T ss_pred CcchHHHHHHHHHHHHCCCeEEEEeCCCCcccHHHHHHHHHHcCC
Confidence 3477889999999999999999999974 5588888887887
No 120
>PRK08942 D,D-heptose 1,7-bisphosphate phosphatase; Validated
Probab=95.27 E-value=0.077 Score=53.83 Aligned_cols=53 Identities=15% Similarity=0.118 Sum_probs=35.6
Q ss_pred CCCeEEEEcCCcCCHHHhhhccccc-ccc-CCcc-chhcccc--ceehhchhhhHHHH
Q 002029 638 TSSTTLAIGDGANDVGMLQEADIGV-GIS-GVEG-MQAVMSS--DIAIAQFRFLERLL 690 (978)
Q Consensus 638 ~~~~v~aiGDG~ND~~ml~~AdvGI-~i~-g~e~-~~a~~as--D~vi~~f~~l~~ll 690 (978)
..+.+++|||+.+|+.+-+.|++.. ++. |... ......+ |+++.++..+..++
T Consensus 119 ~~~~~~~VgDs~~Di~~A~~aG~~~i~v~~g~~~~~~~~~~~~~~~ii~~l~el~~~l 176 (181)
T PRK08942 119 DLAGSPMVGDSLRDLQAAAAAGVTPVLVRTGKGVTTLAEGAAPGTWVLDSLADLPQAL 176 (181)
T ss_pred ChhhEEEEeCCHHHHHHHHHCCCeEEEEcCCCCchhhhcccCCCceeecCHHHHHHHH
Confidence 3468999999999999999999854 332 2111 1112235 88888887776653
No 121
>COG4359 Uncharacterized conserved protein [Function unknown]
Probab=95.26 E-value=0.071 Score=52.08 Aligned_cols=108 Identities=17% Similarity=0.197 Sum_probs=70.2
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCccccC-ceEEEEecCCCcccccchhhhHHHHHHHHHHHHHH
Q 002029 489 KLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQG-MRQVIISSETPESKTLEKSEDKSAAAAALKASVLH 567 (978)
Q Consensus 489 ~lr~~v~~~I~~L~~aGIkv~mlTGD~~~tA~~ia~~~gl~~~~-~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 567 (978)
+++|+-++.++.+++.+|.++++||-.......+-...+ ..+ ...+.+-.++.
T Consensus 73 ~Idp~fKef~e~ike~di~fiVvSsGm~~fI~~lfe~iv--gke~i~~idi~sn~~------------------------ 126 (220)
T COG4359 73 KIDPGFKEFVEWIKEHDIPFIVVSSGMDPFIYPLFEGIV--GKERIYCIDIVSNND------------------------ 126 (220)
T ss_pred ccCccHHHHHHHHHHcCCCEEEEeCCCchHHHHHHHhhc--cccceeeeEEeecCc------------------------
Confidence 589999999999999999999999988777666665433 111 01111111110
Q ss_pred HHHhhhhhhccccCCCCCeEEEEcCchhhhhchhhHHHHHHHHHhccCeeEEEeCC--chhHHHHHHHHHccCCCeEEEE
Q 002029 568 QLIRGKELLDSSNESLGPLALIIDGKSLTYALEDDVKDLFLELAIGCASVICCRSS--PKQKALVTRLVKTKTSSTTLAI 645 (978)
Q Consensus 568 ~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~f~~l~~~~~~vi~~r~s--P~qK~~iV~~lk~~~~~~v~ai 645 (978)
.+-++|.- .++.-.-+ -.+|..+|+.+++ +.+.+.++
T Consensus 127 -------------------~ih~dg~h---------------------~i~~~~ds~fG~dK~~vI~~l~e-~~e~~fy~ 165 (220)
T COG4359 127 -------------------YIHIDGQH---------------------SIKYTDDSQFGHDKSSVIHELSE-PNESIFYC 165 (220)
T ss_pred -------------------eEcCCCce---------------------eeecCCccccCCCcchhHHHhhc-CCceEEEe
Confidence 11111110 01111112 3579999999998 78889999
Q ss_pred cCCcCCHHHhhhcccccc
Q 002029 646 GDGANDVGMLQEADIGVG 663 (978)
Q Consensus 646 GDG~ND~~ml~~AdvGI~ 663 (978)
|||+-|++|-+.+|+=.|
T Consensus 166 GDsvsDlsaaklsDllFA 183 (220)
T COG4359 166 GDSVSDLSAAKLSDLLFA 183 (220)
T ss_pred cCCcccccHhhhhhhHhh
Confidence 999999998777777664
No 122
>PRK09449 dUMP phosphatase; Provisional
Probab=95.22 E-value=0.1 Score=54.94 Aligned_cols=39 Identities=18% Similarity=0.091 Sum_probs=33.3
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCc
Q 002029 489 KLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSL 528 (978)
Q Consensus 489 ~lr~~v~~~I~~L~~aGIkv~mlTGD~~~tA~~ia~~~gl 528 (978)
++.+|+.++++.|+ +|+++.++|+.....+...-...|+
T Consensus 95 ~~~~g~~~~L~~L~-~~~~~~i~Tn~~~~~~~~~l~~~~l 133 (224)
T PRK09449 95 TPLPGAVELLNALR-GKVKMGIITNGFTELQQVRLERTGL 133 (224)
T ss_pred ccCccHHHHHHHHH-hCCeEEEEeCCcHHHHHHHHHhCCh
Confidence 47899999999999 6899999999888877776666666
No 123
>TIGR01428 HAD_type_II 2-haloalkanoic acid dehalogenase, type II. Note that the Type I HAD enzymes have not yet been fully characterized, but clearly utilize a substantially different catalytic mechanism and are thus unlikely to be related.
Probab=95.04 E-value=0.077 Score=54.66 Aligned_cols=40 Identities=18% Similarity=0.222 Sum_probs=36.4
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCc
Q 002029 489 KLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSL 528 (978)
Q Consensus 489 ~lr~~v~~~I~~L~~aGIkv~mlTGD~~~tA~~ia~~~gl 528 (978)
++.+++.++++.|++.|+++.++|+-+...+..+....|+
T Consensus 92 ~~~~~~~~~L~~L~~~g~~~~i~Sn~~~~~~~~~l~~~gl 131 (198)
T TIGR01428 92 PPHPDVPAGLRALKERGYRLAILSNGSPAMLKSLVKHAGL 131 (198)
T ss_pred CCCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHCCC
Confidence 5789999999999999999999999888888888888886
No 124
>PLN02770 haloacid dehalogenase-like hydrolase family protein
Probab=95.01 E-value=0.074 Score=57.00 Aligned_cols=41 Identities=22% Similarity=0.089 Sum_probs=37.8
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCcc
Q 002029 489 KLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLL 529 (978)
Q Consensus 489 ~lr~~v~~~I~~L~~aGIkv~mlTGD~~~tA~~ia~~~gl~ 529 (978)
++.||+.++++.|++.|+++.++|+-....+..+-+..|+.
T Consensus 108 ~l~pgv~e~L~~L~~~g~~l~I~Tn~~~~~~~~~l~~~gl~ 148 (248)
T PLN02770 108 KPLNGLYKLKKWIEDRGLKRAAVTNAPRENAELMISLLGLS 148 (248)
T ss_pred CcCccHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHHcCCh
Confidence 57899999999999999999999999999999988888874
No 125
>PHA02530 pseT polynucleotide kinase; Provisional
Probab=95.01 E-value=0.047 Score=60.41 Aligned_cols=44 Identities=20% Similarity=0.083 Sum_probs=40.6
Q ss_pred eccccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCcc
Q 002029 486 VEDKLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLL 529 (978)
Q Consensus 486 ieD~lr~~v~~~I~~L~~aGIkv~mlTGD~~~tA~~ia~~~gl~ 529 (978)
..+++.+++.++++.|++.|++++++||....++..+.+.+++.
T Consensus 184 ~~~~~~~~~~~~l~~l~~~g~~i~i~T~r~~~~~~~~l~~l~~~ 227 (300)
T PHA02530 184 KEDKPNPMVVELVKMYKAAGYEIIVVSGRDGVCEEDTVEWLRQT 227 (300)
T ss_pred ccCCCChhHHHHHHHHHhCCCEEEEEeCCChhhHHHHHHHHHHc
Confidence 57789999999999999999999999999999999998888773
No 126
>PLN02940 riboflavin kinase
Probab=94.91 E-value=0.069 Score=61.01 Aligned_cols=40 Identities=13% Similarity=0.045 Sum_probs=33.7
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHH-HcCc
Q 002029 489 KLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGF-ACSL 528 (978)
Q Consensus 489 ~lr~~v~~~I~~L~~aGIkv~mlTGD~~~tA~~ia~-~~gl 528 (978)
++.+|+.++++.|++.|+++.++|+.....+..... ..|+
T Consensus 93 ~l~pGv~elL~~Lk~~g~~l~IvTn~~~~~~~~~l~~~~gl 133 (382)
T PLN02940 93 KALPGANRLIKHLKSHGVPMALASNSPRANIEAKISCHQGW 133 (382)
T ss_pred CCCcCHHHHHHHHHHCCCcEEEEeCCcHHHHHHHHHhccCh
Confidence 477999999999999999999999998887766554 4555
No 127
>PF13419 HAD_2: Haloacid dehalogenase-like hydrolase; PDB: 2FI1_A 2I6X_A 3SD7_A 4F71_A 4DFD_B 4F72_B 4DCC_A 3DDH_A 3KZX_A 2B0C_A ....
Probab=94.67 E-value=0.065 Score=53.42 Aligned_cols=43 Identities=21% Similarity=0.205 Sum_probs=39.8
Q ss_pred ccccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCcc
Q 002029 487 EDKLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLL 529 (978)
Q Consensus 487 eD~lr~~v~~~I~~L~~aGIkv~mlTGD~~~tA~~ia~~~gl~ 529 (978)
..++.+++.+.++.|++.|++++++|+-....+....+..|+.
T Consensus 75 ~~~~~~~~~~~L~~l~~~~~~~~i~Sn~~~~~~~~~l~~~~~~ 117 (176)
T PF13419_consen 75 KLQPYPGVRELLERLKAKGIPLVIVSNGSRERIERVLERLGLD 117 (176)
T ss_dssp GEEESTTHHHHHHHHHHTTSEEEEEESSEHHHHHHHHHHTTHG
T ss_pred ccchhhhhhhhhhhcccccceeEEeecCCcccccccccccccc
Confidence 4578999999999999999999999999999999999999885
No 128
>TIGR01990 bPGM beta-phosphoglucomutase. The enzyme from L. lactis has been extensively characterized including a remarkable crystal structure which traps the pentacoordinate transition state.
Probab=94.65 E-value=0.072 Score=54.08 Aligned_cols=39 Identities=21% Similarity=0.252 Sum_probs=30.7
Q ss_pred cccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCc
Q 002029 488 DKLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSL 528 (978)
Q Consensus 488 D~lr~~v~~~I~~L~~aGIkv~mlTGD~~~tA~~ia~~~gl 528 (978)
.++.||+.++++.|+++|+++.++|+... +..+.+..|+
T Consensus 86 ~~~~pg~~~~L~~L~~~g~~~~i~s~~~~--~~~~l~~~~l 124 (185)
T TIGR01990 86 ADVLPGIKNLLDDLKKNNIKIALASASKN--APTVLEKLGL 124 (185)
T ss_pred cccCccHHHHHHHHHHCCCeEEEEeCCcc--HHHHHHhcCc
Confidence 36789999999999999999999997532 3445555665
No 129
>TIGR01685 MDP-1 magnesium-dependent phosphatase-1. This model represents two closely related clades of sequences from eukaryotes and archaea. The mouse enzyme has been characterized as a phosphatase and has been positively identified as a member of the haloacid dehalogenase (HAD) superfamily by site-directed mutagenesis of the active site residues.
Probab=94.61 E-value=0.15 Score=51.00 Aligned_cols=50 Identities=22% Similarity=0.193 Sum_probs=41.6
Q ss_pred EEEEEEeeccccCCChHHHHHHHHHcCCeEEEEcCC-ChhhHHHHHHHcCc
Q 002029 479 ILLGATAVEDKLQNGVPECIDKLAQAGIKLWVLTGD-KMETAINIGFACSL 528 (978)
Q Consensus 479 ~llG~i~ieD~lr~~v~~~I~~L~~aGIkv~mlTGD-~~~tA~~ia~~~gl 528 (978)
......+-+-++.+|+.++++.|+++|+++.++|+- ....+..+-...|+
T Consensus 35 ~~~~~~~~~~~l~pGv~elL~~Lk~~G~~l~I~Sn~~~~~~~~~~L~~~~l 85 (174)
T TIGR01685 35 IIIDKSGTEVTLIKEVRDVLQTLKDAGTYLATASWNDVPEWAYEILGTFEI 85 (174)
T ss_pred eEEeCCCCEEEEcccHHHHHHHHHHCCCEEEEEeCCCChHHHHHHHHhCCc
Confidence 344555556678999999999999999999999975 88888888777776
No 130
>PLN02151 trehalose-phosphatase
Probab=94.52 E-value=0.77 Score=51.14 Aligned_cols=237 Identities=11% Similarity=0.075 Sum_probs=111.8
Q ss_pred HHHHHHHHHHHHHhhcccccHHHHHHHHHH-----HhhcccEEEEEEeeccc--cCCChHHHHHHHHHcCCeEEEEcCCC
Q 002029 443 KEYKQFNEEFTEAKNSVSADREELAEEIAE-----KIEKNLILLGATAVEDK--LQNGVPECIDKLAQAGIKLWVLTGDK 515 (978)
Q Consensus 443 ~e~~~~~~~~~~a~~~l~~~r~~~~~~~~~-----~ie~dl~llG~i~ieD~--lr~~v~~~I~~L~~aGIkv~mlTGD~ 515 (978)
++|..|..++..|...+ ++.+..... .+--|.||+-++.--|. +-++..++|+.|. ++..+.++||+.
T Consensus 71 ~~~~~w~~~~p~a~~~~----~~~~~~~~~~~~ll~lDyDGTL~PIv~~P~~A~~~~~~~~aL~~La-~~~~vaIvSGR~ 145 (354)
T PLN02151 71 NKQSCWIKEHPSALNMF----EEILHKSEGKQIVMFLDYDGTLSPIVDDPDRAFMSKKMRNTVRKLA-KCFPTAIVSGRC 145 (354)
T ss_pred hhHHHHHHhCChHHHHH----HHHHHhhcCCceEEEEecCccCCCCCCCcccccCCHHHHHHHHHHh-cCCCEEEEECCC
Confidence 57889999887776443 222111110 11223444432222222 4567888999998 568999999999
Q ss_pred hhhHHHHHHHcCc--cccCceEEEEecCC-Cccc---ccchhhhHHHHHHHHHHHHHHHHHhhhhhhccccCCCCCeEEE
Q 002029 516 METAINIGFACSL--LRQGMRQVIISSET-PESK---TLEKSEDKSAAAAALKASVLHQLIRGKELLDSSNESLGPLALI 589 (978)
Q Consensus 516 ~~tA~~ia~~~gl--~~~~~~~i~i~~~~-~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv 589 (978)
.........-.++ ....+..+...... .... ........ .... ..+.+...+...........-....+++.
T Consensus 146 ~~~l~~~~~~~~l~laGsHG~e~~~p~~g~~~~~~~~~~~~~~~~-~~~~-~i~~v~~~l~~~~~~~pG~~VE~K~~sla 223 (354)
T PLN02151 146 REKVSSFVKLTELYYAGSHGMDIKGPEQGSKYKKENQSLLCQPAT-EFLP-VINEVYKKLVEKTKSIPGAKVENNKFCAS 223 (354)
T ss_pred HHHHHHHcCCccceEEEeCCceeecCCCCccccccccccccccch-hhHH-HHHHHHHHHHHHHhcCCCCEEEecCcEEE
Confidence 9988877643332 11111111100000 0000 00000000 0000 00112222221112222222223444555
Q ss_pred EcCchhhhhchhhHHHHHHHHHhc--------cCeeEEEeCC-chhHHHHHHHHHccCC------CeEEEEcCCcCCHHH
Q 002029 590 IDGKSLTYALEDDVKDLFLELAIG--------CASVICCRSS-PKQKALVTRLVKTKTS------STTLAIGDGANDVGM 654 (978)
Q Consensus 590 i~G~~l~~~~~~~~~~~f~~l~~~--------~~~vi~~r~s-P~qK~~iV~~lk~~~~------~~v~aiGDG~ND~~m 654 (978)
+.=.....-...++..++..++.. .+.|+=-|.. .-+|+..|+.+.+..+ ..++++||-..|-.|
T Consensus 224 vHYR~a~~~~~~~l~~~l~~v~~~~~~l~v~~GkkVvEvrP~~~~dKG~Av~~Ll~~~~~~~~~~~~pvyiGDD~TDEDa 303 (354)
T PLN02151 224 VHFRCVEENKWSDLANQVRSVLKNYPKLMLTQGRKVLEIRPIIKWDKGKALEFLLESLGYANCTDVFPIYIGDDRTDEDA 303 (354)
T ss_pred EEeCCCChHHHHHHHHHHHHHHhhCCCcEEecCCEEEEEeCCCCCCHHHHHHHHHHhcccccCCCCeEEEEcCCCcHHHH
Confidence 443322211111222333333222 2223333332 3489999998876432 248999999999999
Q ss_pred hhhc-----cccccccCCccchhccccceehhchhhhHHH
Q 002029 655 LQEA-----DIGVGISGVEGMQAVMSSDIAIAQFRFLERL 689 (978)
Q Consensus 655 l~~A-----dvGI~i~g~e~~~a~~asD~vi~~f~~l~~l 689 (978)
++.. ++||.++... ....|++.+.+-..+..+
T Consensus 304 F~~L~~~~~G~gI~Vg~~~---k~T~A~y~L~dp~eV~~~ 340 (354)
T PLN02151 304 FKILRDKKQGLGILVSKYA---KETNASYSLQEPDEVMEF 340 (354)
T ss_pred HHHHhhcCCCccEEeccCC---CCCcceEeCCCHHHHHHH
Confidence 9865 4445443111 123689999886655544
No 131
>PRK14988 GMP/IMP nucleotidase; Provisional
Probab=94.48 E-value=0.15 Score=53.75 Aligned_cols=41 Identities=15% Similarity=0.055 Sum_probs=35.8
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCcc
Q 002029 489 KLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLL 529 (978)
Q Consensus 489 ~lr~~v~~~I~~L~~aGIkv~mlTGD~~~tA~~ia~~~gl~ 529 (978)
++.+|+.++++.|+++|+++.++|+-..+.+...-...|+.
T Consensus 93 ~~~~g~~e~L~~Lk~~g~~~~i~Tn~~~~~~~~~l~~~~l~ 133 (224)
T PRK14988 93 VLREDTVPFLEALKASGKRRILLTNAHPHNLAVKLEHTGLD 133 (224)
T ss_pred CcCCCHHHHHHHHHhCCCeEEEEeCcCHHHHHHHHHHCCcH
Confidence 67899999999999999999999998888887776667763
No 132
>TIGR02009 PGMB-YQAB-SF beta-phosphoglucomutase family hydrolase. All of these are members of the larger Haloacid dehalogenase (HAD) subfamily IA and include the "variant 3" glu-asp version of the third conserved HAD domain (TIGR01509).
Probab=94.46 E-value=0.088 Score=53.43 Aligned_cols=39 Identities=18% Similarity=0.244 Sum_probs=33.0
Q ss_pred cccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCc
Q 002029 488 DKLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSL 528 (978)
Q Consensus 488 D~lr~~v~~~I~~L~~aGIkv~mlTGD~~~tA~~ia~~~gl 528 (978)
-++.||+.++++.|++.|+++.++|+. ..+..+-+..|+
T Consensus 87 ~~~~~g~~~~l~~l~~~g~~i~i~S~~--~~~~~~l~~~~l 125 (185)
T TIGR02009 87 AEVLPGIENFLKRLKKKGIAVGLGSSS--KNADRILAKLGL 125 (185)
T ss_pred CCCCcCHHHHHHHHHHcCCeEEEEeCc--hhHHHHHHHcCh
Confidence 468999999999999999999999987 556666666776
No 133
>PLN02811 hydrolase
Probab=94.45 E-value=0.12 Score=54.33 Aligned_cols=32 Identities=22% Similarity=0.334 Sum_probs=27.7
Q ss_pred cccCCChHHHHHHHHHcCCeEEEEcCCChhhH
Q 002029 488 DKLQNGVPECIDKLAQAGIKLWVLTGDKMETA 519 (978)
Q Consensus 488 D~lr~~v~~~I~~L~~aGIkv~mlTGD~~~tA 519 (978)
-++.+|+.++|+.|++.|+++.++||-.....
T Consensus 77 ~~l~~gv~e~l~~L~~~g~~~~i~S~~~~~~~ 108 (220)
T PLN02811 77 SDLMPGAERLVRHLHAKGIPIAIATGSHKRHF 108 (220)
T ss_pred CCCCccHHHHHHHHHHCCCcEEEEeCCchhhH
Confidence 35789999999999999999999998766543
No 134
>TIGR01509 HAD-SF-IA-v3 haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED. HAD subfamilies caused by an overly broad single model.
Probab=94.42 E-value=0.14 Score=51.69 Aligned_cols=40 Identities=25% Similarity=0.215 Sum_probs=33.3
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCcc
Q 002029 489 KLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLL 529 (978)
Q Consensus 489 ~lr~~v~~~I~~L~~aGIkv~mlTGD~~~tA~~ia~~~gl~ 529 (978)
++.+++.++++.|+++|++++++|+-.... ..+..++|+.
T Consensus 85 ~~~~g~~~~l~~l~~~g~~~~i~Tn~~~~~-~~~~~~~~l~ 124 (183)
T TIGR01509 85 KPLPGVEPLLEALRARGKKLALLTNSPRDH-AVLVQELGLR 124 (183)
T ss_pred ccCcCHHHHHHHHHHCCCeEEEEeCCchHH-HHHHHhcCCH
Confidence 688999999999999999999999988777 4444446663
No 135
>TIGR02254 YjjG/YfnB HAD superfamily (subfamily IA) hydrolase, TIGR02254. This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549). Most likely, these enzymes are phosphatases.
Probab=94.15 E-value=0.18 Score=52.81 Aligned_cols=40 Identities=25% Similarity=0.322 Sum_probs=35.9
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCcc
Q 002029 489 KLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLL 529 (978)
Q Consensus 489 ~lr~~v~~~I~~L~~aGIkv~mlTGD~~~tA~~ia~~~gl~ 529 (978)
++.+|+.++++.|++. +++.++|+-....+..+.++.|+.
T Consensus 97 ~~~~g~~~~L~~l~~~-~~~~i~Sn~~~~~~~~~l~~~~l~ 136 (224)
T TIGR02254 97 QLLPGAFELMENLQQK-FRLYIVTNGVRETQYKRLRKSGLF 136 (224)
T ss_pred eeCccHHHHHHHHHhc-CcEEEEeCCchHHHHHHHHHCCcH
Confidence 5789999999999999 999999999888888888888874
No 136
>TIGR01549 HAD-SF-IA-v1 haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E. HAD subfamilies caused by an overly broad single model.
Probab=93.48 E-value=0.23 Score=48.68 Aligned_cols=40 Identities=20% Similarity=0.335 Sum_probs=33.9
Q ss_pred ccccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHc
Q 002029 487 EDKLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFAC 526 (978)
Q Consensus 487 eD~lr~~v~~~I~~L~~aGIkv~mlTGD~~~tA~~ia~~~ 526 (978)
+.+..+|+.++++.|++.|+++.++|+-....+....+..
T Consensus 62 ~~~~~~g~~e~l~~L~~~g~~~~i~T~~~~~~~~~~~~~~ 101 (154)
T TIGR01549 62 EEAYIRGAADLLKRLKEAGIKLGIISNGSLRAQKLLLRKH 101 (154)
T ss_pred hheeccCHHHHHHHHHHCcCeEEEEeCCchHHHHHHHHHH
Confidence 4455689999999999999999999999988887766654
No 137
>TIGR01668 YqeG_hyp_ppase HAD superfamily (subfamily IIIA) phosphatase, TIGR01668. This family consists of sequences from fungi, plants, cyanobacteria, gram-positive bacteria and Deinococcus. There is presently no characterization of any sequence in this family.
Probab=93.35 E-value=0.28 Score=49.13 Aligned_cols=41 Identities=20% Similarity=0.313 Sum_probs=33.9
Q ss_pred cccCCChHHHHHHHHHcCCeEEEEcCCC-hhhHHHHHHHcCc
Q 002029 488 DKLQNGVPECIDKLAQAGIKLWVLTGDK-METAINIGFACSL 528 (978)
Q Consensus 488 D~lr~~v~~~I~~L~~aGIkv~mlTGD~-~~tA~~ia~~~gl 528 (978)
.++.++++++++.|++.|+++.++|+-. ...+..+.+.+|+
T Consensus 42 ~~~~pgv~e~L~~Lk~~g~~l~I~Sn~~~~~~~~~~~~~~gl 83 (170)
T TIGR01668 42 NEAYPALRDWIEELKAAGRKLLIVSNNAGEQRAKAVEKALGI 83 (170)
T ss_pred CCcChhHHHHHHHHHHcCCEEEEEeCCchHHHHHHHHHHcCC
Confidence 3578999999999999999999999987 5666666666664
No 138
>PF06888 Put_Phosphatase: Putative Phosphatase; InterPro: IPR016965 This group represents phosphatases related to PHOSPHO1 and PHOSPHO2 []. It includes plant phosphatases with homology to the haloacid dehalogenase (HAD) superfamily [, ]. PHOSPHO1 is a phosphoethanolamine/phosphocholine phosphatase [], while PHOSPHO2 has high activity toward pyridoxal 5'-phosphate (PLP), and it is active at much lower level toward pyrophosphate, phosphoethanolamine (PEA)and phosphocholine (PCho) []. ; GO: 0016791 phosphatase activity
Probab=92.73 E-value=0.46 Score=49.88 Aligned_cols=41 Identities=20% Similarity=0.169 Sum_probs=36.1
Q ss_pred ccCCChHHHHHHH--HHcCCeEEEEcCCChhhHHHHHHHcCcc
Q 002029 489 KLQNGVPECIDKL--AQAGIKLWVLTGDKMETAINIGFACSLL 529 (978)
Q Consensus 489 ~lr~~v~~~I~~L--~~aGIkv~mlTGD~~~tA~~ia~~~gl~ 529 (978)
|+.++.+++++.+ ++.|+.+.++|.-+...-..+-+.-|+-
T Consensus 71 p~~pgm~~~l~~l~~~~~~~~~~IiSDaNs~fI~~iL~~~gl~ 113 (234)
T PF06888_consen 71 PIDPGMKELLRFLAKNQRGFDLIIISDANSFFIETILEHHGLR 113 (234)
T ss_pred CCCccHHHHHHHHHhcCCCceEEEEeCCcHhHHHHHHHhCCCc
Confidence 6789999999999 5689999999999988888888888874
No 139
>smart00577 CPDc catalytic domain of ctd-like phosphatases.
Probab=92.72 E-value=0.13 Score=50.38 Aligned_cols=42 Identities=21% Similarity=0.041 Sum_probs=37.0
Q ss_pred eccccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCc
Q 002029 486 VEDKLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSL 528 (978)
Q Consensus 486 ieD~lr~~v~~~I~~L~~aGIkv~mlTGD~~~tA~~ia~~~gl 528 (978)
..-+++||+.+.++.|+ .++++.+.|+-....|..+-+.+++
T Consensus 42 ~~v~l~pG~~e~L~~L~-~~~~l~I~Ts~~~~~~~~il~~l~~ 83 (148)
T smart00577 42 VYVKKRPGVDEFLKRAS-ELFELVVFTAGLRMYADPVLDLLDP 83 (148)
T ss_pred EEEEECCCHHHHHHHHH-hccEEEEEeCCcHHHHHHHHHHhCc
Confidence 34468999999999999 5799999999999999998888776
No 140
>TIGR02252 DREG-2 REG-2-like, HAD superfamily (subfamily IA) hydrolase. Most likely, these sequences, like the vast majority of HAD sequences, represent phosphatase enzymes.
Probab=92.63 E-value=0.38 Score=49.67 Aligned_cols=39 Identities=15% Similarity=0.116 Sum_probs=31.2
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCc
Q 002029 489 KLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSL 528 (978)
Q Consensus 489 ~lr~~v~~~I~~L~~aGIkv~mlTGD~~~tA~~ia~~~gl 528 (978)
++.||+.++++.|+++|+++.++|+-... +.......|+
T Consensus 105 ~~~~g~~~~l~~L~~~g~~~~i~Sn~~~~-~~~~l~~~~l 143 (203)
T TIGR02252 105 QVYPDAIKLLKDLRERGLILGVISNFDSR-LRGLLEALGL 143 (203)
T ss_pred eeCcCHHHHHHHHHHCCCEEEEEeCCchh-HHHHHHHCCc
Confidence 67899999999999999999999986543 3555555565
No 141
>TIGR01681 HAD-SF-IIIC HAD-superfamily phosphatase, subfamily IIIC. No member of this subfamily is characterized with respect to function, however the MDP-1 protein is a characterized phosphatase. All of the characterized enzymes within subfamily III are phosphatases, and all of the active site residues characteristic of HAD-superfamily phosphatases are present in subfamily IIIC.
Probab=92.39 E-value=0.4 Score=45.51 Aligned_cols=39 Identities=10% Similarity=0.060 Sum_probs=33.2
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEcCC-ChhhHHHHHHHcC
Q 002029 489 KLQNGVPECIDKLAQAGIKLWVLTGD-KMETAINIGFACS 527 (978)
Q Consensus 489 ~lr~~v~~~I~~L~~aGIkv~mlTGD-~~~tA~~ia~~~g 527 (978)
++.+|+.++++.|+++|+++.++|+- ....+..+-+..+
T Consensus 29 ~~~~gv~e~L~~Lk~~g~~l~i~Sn~~~~~~~~~~l~~~~ 68 (128)
T TIGR01681 29 VTIKEIRDKLQTLKKNGFLLALASYNDDPHVAYELLKIFE 68 (128)
T ss_pred HHHHHHHHHHHHHHHCCeEEEEEeCCCCHHHHHHHHHhcc
Confidence 78999999999999999999999999 6776666555544
No 142
>TIGR01533 lipo_e_P4 5'-nucleotidase, lipoprotein e(P4) family. which in turn belongs to the haloacid dehalogenase (HAD) superfamily of aspartate-dependent hydrolases. Members are found on the outer membrane of Gram-negative bacteria and the cytoplasmic membrane of Gram-positive bacteria. Most members have classic lipoprotein signal sequences. A critical role of this 5'-nucleotidase in Haemophilus influenzae is the degradation of external riboside in order to allow transport into the cell. An earlier suggested role in hemin transport is no longer current. This enzyme may also have other physiologically significant roles.
Probab=92.30 E-value=0.65 Score=49.88 Aligned_cols=42 Identities=10% Similarity=0.152 Sum_probs=32.4
Q ss_pred ccccCCChHHHHHHHHHcCCeEEEEcCCChhhHH---HHHHHcCc
Q 002029 487 EDKLQNGVPECIDKLAQAGIKLWVLTGDKMETAI---NIGFACSL 528 (978)
Q Consensus 487 eD~lr~~v~~~I~~L~~aGIkv~mlTGD~~~tA~---~ia~~~gl 528 (978)
..++-||+.+.++.|++.|+++.++|+....... ..-+..|+
T Consensus 116 ~a~~ipGA~e~L~~L~~~G~~v~iVTnR~~~~~~~T~~~Lkk~Gi 160 (266)
T TIGR01533 116 QAKPVAGALDFLNYANSKGVKIFYVSNRSEKEKAATLKNLKRFGF 160 (266)
T ss_pred CCCcCccHHHHHHHHHHCCCeEEEEeCCCcchHHHHHHHHHHcCc
Confidence 4567899999999999999999999998754433 33344555
No 143
>TIGR01261 hisB_Nterm histidinol-phosphatase. This model describes histidinol phosphatase. All known examples in the scope of this model are bifunctional proteins with a histidinol phosphatase domain followed by an imidazoleglycerol-phosphate dehydratase domain. These enzymatic domains catalyze the ninth and seventh steps, respectively, of histidine biosynthesis.
Probab=92.25 E-value=0.38 Score=47.73 Aligned_cols=26 Identities=31% Similarity=0.511 Sum_probs=23.8
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEcCC
Q 002029 489 KLQNGVPECIDKLAQAGIKLWVLTGD 514 (978)
Q Consensus 489 ~lr~~v~~~I~~L~~aGIkv~mlTGD 514 (978)
++-+|+.++++.|+++|+++.++|.-
T Consensus 29 ~~~pgv~e~L~~L~~~g~~l~IvSN~ 54 (161)
T TIGR01261 29 RFEKGVIPALLKLKKAGYKFVMVTNQ 54 (161)
T ss_pred eECCCHHHHHHHHHHCCCeEEEEeCC
Confidence 46799999999999999999999975
No 144
>TIGR01656 Histidinol-ppas histidinol-phosphate phosphatase family domain. This domain is a member of the haloacid-dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. This superfamily is distinguished by the presence of three motifs: an N-terminal motif containing the nucleophilic aspartate, a central motif containing an conserved serine or threonine, and a C-terminal motif containing a conserved lysine (or arginine) and conserved aspartates. More specifically, the domian modelled here is a member of subfamily III of the HAD-superfamily by virtue of lacking a "capping" domain in either of the two common positions, between motifs 1 and 2, or between motifs 2 and 3.
Probab=92.01 E-value=0.32 Score=47.40 Aligned_cols=27 Identities=26% Similarity=0.369 Sum_probs=25.0
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEcCCC
Q 002029 489 KLQNGVPECIDKLAQAGIKLWVLTGDK 515 (978)
Q Consensus 489 ~lr~~v~~~I~~L~~aGIkv~mlTGD~ 515 (978)
++.||+.++++.|++.|+++.++|+..
T Consensus 27 ~~~~g~~~~l~~Lk~~g~~~~I~Sn~~ 53 (147)
T TIGR01656 27 QLRPGAVPALLTLRAAGYTVVVVTNQS 53 (147)
T ss_pred EEcCChHHHHHHHHHCCCEEEEEeCCC
Confidence 478999999999999999999999875
No 145
>TIGR00213 GmhB_yaeD D,D-heptose 1,7-bisphosphate phosphatase. This family of proteins formerly designated yaeD resembles the histidinol phosphatase domain of the bifunctional protein HisB. The member from E. coli has been characterized as D,D-heptose 1,7-bisphosphate phosphatase, GmhB, involved in inner core LPS assembly (PubMed:11751812).
Probab=91.89 E-value=0.67 Score=46.71 Aligned_cols=48 Identities=17% Similarity=0.145 Sum_probs=33.0
Q ss_pred CCeEEEEcCCcCCHHHhhhccccc--cc-cCCccch-hccccceehhchhhh
Q 002029 639 SSTTLAIGDGANDVGMLQEADIGV--GI-SGVEGMQ-AVMSSDIAIAQFRFL 686 (978)
Q Consensus 639 ~~~v~aiGDG~ND~~ml~~AdvGI--~i-~g~e~~~-a~~asD~vi~~f~~l 686 (978)
...++||||..+|+.+=++|++.. ++ .|..... ....+|+++.++..|
T Consensus 123 ~~~~v~VGDs~~Di~aA~~aG~~~~i~v~~g~~~~~~~~~~ad~~i~~~~el 174 (176)
T TIGR00213 123 MAQSYMVGDKLEDMQAGVAAKVKTNVLVRTGKPITPEAENIADWVLNSLADL 174 (176)
T ss_pred hhhEEEEcCCHHHHHHHHHCCCcEEEEEecCCcccccccccCCEEeccHHHh
Confidence 367899999999999999999853 43 2322111 123489988876654
No 146
>PF02358 Trehalose_PPase: Trehalose-phosphatase; InterPro: IPR003337 Trehalose-phosphatases 3.1.3.12 from EC catalyse the de-phosphorylation of trehalose-6-phosphate to trehalose and orthophosphate. Trehalose is a common disaccharide of bacteria, fungi and invertebrates that appears to play a major role in desiccation tolerance. A pathway for trehalose biosynthesis may also exist in plants []. The trehalose-phosphatase signature is found in the C terminus of trehalose-6-phosphate synthase 2.4.1.15 from EC adjacent to the trehalose-6-phosphate synthase domain (see IPR001830 from INTERPRO). It would appear that the two equivalent genes in the Escherichia coli otsBA operon: otsA, the trehalose-6-phosphate synthase and otsB, trehalose-phosphatase (this family) have undergone gene fusion in most eukaryotes [].; GO: 0003824 catalytic activity, 0005992 trehalose biosynthetic process; PDB: 1U02_A.
Probab=91.21 E-value=0.88 Score=48.27 Aligned_cols=188 Identities=13% Similarity=0.090 Sum_probs=76.1
Q ss_pred ccCCChHHHHHHHHHcC-CeEEEEcCCChhhHHHHHH--HcCccccCceEEEEecCCCcccccchhhhHHHHHHHHHHHH
Q 002029 489 KLQNGVPECIDKLAQAG-IKLWVLTGDKMETAINIGF--ACSLLRQGMRQVIISSETPESKTLEKSEDKSAAAAALKASV 565 (978)
Q Consensus 489 ~lr~~v~~~I~~L~~aG-Ikv~mlTGD~~~tA~~ia~--~~gl~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~ 565 (978)
.+-+++.+++++|.+.. ..|+++||+.......... .++++.+++..+...+....... ........ .+.+
T Consensus 19 ~~~~~~~~~L~~La~~~~~~v~IvSGR~~~~~~~~~~~~~i~l~gehG~e~~~~~~~~~~~~-~~~~~~~~-----~~~~ 92 (235)
T PF02358_consen 19 VPPPELRELLRALAADPNNTVAIVSGRSLDDLERFGGIPNIGLAGEHGAEIRRPGGSEWTNL-PADEDLEW-----KDEV 92 (235)
T ss_dssp ---HHHHHHHHHHHHHSE--EEEE-SS-HHHHHHH-S-SS-EEEEGGGTEEEETTE-EEE-T-TGGGGHHH-----HHHH
T ss_pred CCCHHHHHHHHHHhccCCCEEEEEEeCCHHHhHHhcCCCCceEEEEeeEEeccCcccccccc-ccccchHH-----HHHH
Confidence 45578889999998874 4899999999998655532 23445454444443333211110 00111111 1111
Q ss_pred HHHHHhhhhhhccccCCCCCeEEEEcCchhhhh----chhhHHHHHHHHH--------hccCeeEEEeCCchhHHHHHHH
Q 002029 566 LHQLIRGKELLDSSNESLGPLALIIDGKSLTYA----LEDDVKDLFLELA--------IGCASVICCRSSPKQKALVTRL 633 (978)
Q Consensus 566 ~~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~----~~~~~~~~f~~l~--------~~~~~vi~~r~sP~qK~~iV~~ 633 (978)
...+...........-.....++.+.-.....- ...++...+..+. ...+.+|=.|..-..|+..|+.
T Consensus 93 ~~~l~~~~~~~pG~~iE~K~~sv~~Hyr~~~~~~~~~~~~~l~~~l~~~~~~~~~~~v~~g~~~vEvrp~~~~KG~av~~ 172 (235)
T PF02358_consen 93 REILEYFAERTPGSFIEDKEFSVAFHYRNAPPEFGEAQARELAEQLREILASHPGLEVVPGKKVVEVRPPGVNKGSAVRR 172 (235)
T ss_dssp HHHHTTHHHHSTT-EEEEETTEEEEE-TTS-ST----THHHHHHHHHHHHHHH-T-EEEE-SSEEEEE-TT--HHHHHHH
T ss_pred HHHHHHHHhhccCcEEEECCeEEEEEecCCCcchhhhHHHHHHHHHHHHHHhCCCEEEEECCCEEEEEeCCCChHHHHHH
Confidence 111111111111111112223333333222211 1123333333222 2234455556666679999997
Q ss_pred HHccCC------CeEEEEcCCcCCHHHhhhccc------cccccCCccchhccccceehhc
Q 002029 634 VKTKTS------STTLAIGDGANDVGMLQEADI------GVGISGVEGMQAVMSSDIAIAQ 682 (978)
Q Consensus 634 lk~~~~------~~v~aiGDG~ND~~ml~~Adv------GI~i~g~e~~~a~~asD~vi~~ 682 (978)
+-+..+ ..++++||...|-.|++..+= ||-+...+......+|++-+.+
T Consensus 173 ll~~~~~~~~~~~~~l~~GDD~tDE~~f~~~~~~~~~~~~i~V~~~~~~~~~t~A~y~l~~ 233 (235)
T PF02358_consen 173 LLEELPFAGPKPDFVLYIGDDRTDEDAFRALRELEEGGFGIKVGSVSVGEKPTAASYRLDD 233 (235)
T ss_dssp HHTTS---------EEEEESSHHHHHHHHTTTTS----EEEEES-----------------
T ss_pred HHHhcCccccccceeEEecCCCCCHHHHHHHHhcccCCCCeEEEeeccccccccccccccc
Confidence 776444 379999999999999988544 4444333211123455665543
No 147
>PRK05446 imidazole glycerol-phosphate dehydratase/histidinol phosphatase; Provisional
Probab=90.94 E-value=0.61 Score=52.26 Aligned_cols=26 Identities=35% Similarity=0.415 Sum_probs=24.4
Q ss_pred cccCCChHHHHHHHHHcCCeEEEEcC
Q 002029 488 DKLQNGVPECIDKLAQAGIKLWVLTG 513 (978)
Q Consensus 488 D~lr~~v~~~I~~L~~aGIkv~mlTG 513 (978)
-++.|++.++++.|+++|+++.++|+
T Consensus 29 ~~l~pGV~e~L~~Lk~~G~kL~IvTN 54 (354)
T PRK05446 29 LAFEPGVIPALLKLQKAGYKLVMVTN 54 (354)
T ss_pred ceECcCHHHHHHHHHhCCCeEEEEEC
Confidence 36889999999999999999999998
No 148
>PF08235 LNS2: LNS2 (Lipin/Ned1/Smp2); InterPro: IPR013209 This domain is found in Saccharomyces cerevisiae (Baker's yeast) protein SMP2, proteins with an N-terminal lipin domain (IPR007651 from INTERPRO) and phosphatidylinositol transfer proteins []. SMP2 is involved in plasmid maintenance and respiration []. Lipin proteins are involved in adipose tissue development and insulin resistance [].
Probab=90.62 E-value=1.1 Score=43.68 Aligned_cols=114 Identities=19% Similarity=0.163 Sum_probs=70.8
Q ss_pred ccccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCccccCceEEEEecCCCcccccchhhhHHHHHHHHHHHHH
Q 002029 487 EDKLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQGMRQVIISSETPESKTLEKSEDKSAAAAALKASVL 566 (978)
Q Consensus 487 eD~lr~~v~~~I~~L~~aGIkv~mlTGD~~~tA~~ia~~~gl~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 566 (978)
.|..++++.+..+.+++.|.+++.||++..-.|...-.=+.=..++.
T Consensus 25 ~d~~h~g~~~l~~~i~~~GY~ilYlTaRp~~qa~~Tr~~L~~~~q~~--------------------------------- 71 (157)
T PF08235_consen 25 KDWTHPGAAELYRKIADNGYKILYLTARPIGQANRTRSWLAQHQQQG--------------------------------- 71 (157)
T ss_pred chhhhhcHHHHHHHHHHCCeEEEEECcCcHHHHHHHHHHHHHHHhCC---------------------------------
Confidence 37999999999999999999999999998765543321110000000
Q ss_pred HHHHhhhhhhccccCCCCCeEEEEcCchhhhhchhhHHHHHHHHHhccCeeEEEeCCchhHHHHHHHHHcc----CCCeE
Q 002029 567 HQLIRGKELLDSSNESLGPLALIIDGKSLTYALEDDVKDLFLELAIGCASVICCRSSPKQKALVTRLVKTK----TSSTT 642 (978)
Q Consensus 567 ~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~f~~l~~~~~~vi~~r~sP~qK~~iV~~lk~~----~~~~v 642 (978)
..-..--+..+...+-..+.. -+..+-.-+.|...++.++.. .....
T Consensus 72 --------------~~lP~Gpv~~sP~~l~~al~r---------------Evi~~~p~~fK~~~L~~l~~~f~~~~~pf~ 122 (157)
T PF08235_consen 72 --------------HNLPDGPVLLSPDSLFSALHR---------------EVISKDPEEFKIACLRDLRALFPPDGNPFY 122 (157)
T ss_pred --------------ccCCCCCEEECCcchhhhhhc---------------cccccChHHHHHHHHHHHHHhcCCCCCeEE
Confidence 000111112222222111110 134454456788888888764 45789
Q ss_pred EEEcCCcCCHHHhhhccccc
Q 002029 643 LAIGDGANDVGMLQEADIGV 662 (978)
Q Consensus 643 ~aiGDG~ND~~ml~~AdvGI 662 (978)
+++|...+|+.+.++++|--
T Consensus 123 agfGN~~tDv~aY~~vGip~ 142 (157)
T PF08235_consen 123 AGFGNRSTDVIAYKAVGIPK 142 (157)
T ss_pred EecCCcHHHHHHHHHcCCCh
Confidence 99999999999999887764
No 149
>TIGR02247 HAD-1A3-hyp Epoxide hydrolase N-terminal domain-like phosphatase. These appear to be members of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases by general homology and the conservation of all of the recognized catalytic motifs (although the first motif is unusual in the replacement of the more common aspartate with glycine...). The variable domain is found in between motifs 1 and 2, indicating membership in subfamily I and phylogeny and prediction of the alpha helical nature of the variable domain (by PSI-PRED) indicate membership in subfamily IA.
Probab=90.46 E-value=0.5 Score=49.12 Aligned_cols=29 Identities=24% Similarity=0.269 Sum_probs=25.8
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEcCCChh
Q 002029 489 KLQNGVPECIDKLAQAGIKLWVLTGDKME 517 (978)
Q Consensus 489 ~lr~~v~~~I~~L~~aGIkv~mlTGD~~~ 517 (978)
++.|++.++++.|+++|+++.++|+....
T Consensus 94 ~~~~~~~~~L~~L~~~g~~l~i~Sn~~~~ 122 (211)
T TIGR02247 94 KLRPSMMAAIKTLRAKGFKTACITNNFPT 122 (211)
T ss_pred ccChhHHHHHHHHHHCCCeEEEEeCCCCc
Confidence 57899999999999999999999986543
No 150
>TIGR01691 enolase-ppase 2,3-diketo-5-methylthio-1-phosphopentane phosphatase. This enzyme is the enolase-phosphatase of methionine salvage, a pathway that regenerates methionine from methylthioadenosine (MTA). Adenosylmethionine (AdoMet) is a donor of different moieties for various processes, including methylation reactions. Use of AdoMet for spermidine biosynthesis, which leads to polyamine biosynthesis, leaves MTA as a by-product that must be cleared. In Bacillus subtilis and related species, this single protein is replaced by separate enzymes with enolase and phosphatase activities.
Probab=89.36 E-value=1.2 Score=46.66 Aligned_cols=39 Identities=18% Similarity=0.209 Sum_probs=32.9
Q ss_pred ccccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHH
Q 002029 487 EDKLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFA 525 (978)
Q Consensus 487 eD~lr~~v~~~I~~L~~aGIkv~mlTGD~~~tA~~ia~~ 525 (978)
+-++.+|+.+++++|+++|+++.++|.........+-+.
T Consensus 93 ~~~lypgv~e~L~~Lk~~G~~l~I~Sn~s~~~~~~~~~~ 131 (220)
T TIGR01691 93 TSHLYPDVPPALEAWLQLGLRLAVYSSGSVPAQKLLFGH 131 (220)
T ss_pred ccCcCcCHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHhh
Confidence 457999999999999999999999999887766555444
No 151
>PRK10563 6-phosphogluconate phosphatase; Provisional
Probab=89.00 E-value=0.77 Score=48.07 Aligned_cols=39 Identities=8% Similarity=0.093 Sum_probs=31.1
Q ss_pred cccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCcc
Q 002029 488 DKLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLL 529 (978)
Q Consensus 488 D~lr~~v~~~I~~L~~aGIkv~mlTGD~~~tA~~ia~~~gl~ 529 (978)
-++.+|++++++.| ++++.++|+.....+...-+..|+.
T Consensus 87 ~~~~~gv~~~L~~L---~~~~~ivTn~~~~~~~~~l~~~~l~ 125 (221)
T PRK10563 87 LEPIAGANALLESI---TVPMCVVSNGPVSKMQHSLGKTGML 125 (221)
T ss_pred CCcCCCHHHHHHHc---CCCEEEEeCCcHHHHHHHHHhcChH
Confidence 35678999999998 5999999999887777666666663
No 152
>TIGR01664 DNA-3'-Pase DNA 3'-phosphatase. The central phosphatase domain is a member of the IIIA subfamily (TIGR01662) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. As is common in this superfamily, the enzyme is magnesium dependent. A difference between this enzyme and other HAD-superfamily phosphatases is in the third conserved catalytic motif which usually contains two conserved aspartate residues believed to be involved in binding the magnesium ion. Here, the second aspartate is usually replaced by an arginine residue which may indicate an interaction with the phosphate backbone of the substrate. Alternatively, there is an additional conserved aspartate downstream of the ususal site which may indicate slightly different fold in this region.
Probab=87.93 E-value=2.6 Score=42.04 Aligned_cols=27 Identities=22% Similarity=0.406 Sum_probs=23.8
Q ss_pred cCCChHHHHHHHHHcCCeEEEEcCCCh
Q 002029 490 LQNGVPECIDKLAQAGIKLWVLTGDKM 516 (978)
Q Consensus 490 lr~~v~~~I~~L~~aGIkv~mlTGD~~ 516 (978)
+-+|+.++++.|+++|+++.++|....
T Consensus 43 ~~pgv~e~L~~Lk~~G~~l~I~TN~~~ 69 (166)
T TIGR01664 43 LYPEIPAKLQELDDEGYKIVIFTNQSG 69 (166)
T ss_pred ecCCHHHHHHHHHHCCCEEEEEeCCcc
Confidence 449999999999999999999997543
No 153
>TIGR01686 FkbH FkbH-like domain. The C-terminal portion of this domain is unique to this family (by BLAST).
Probab=87.68 E-value=1.2 Score=49.72 Aligned_cols=37 Identities=19% Similarity=0.191 Sum_probs=33.2
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHH
Q 002029 489 KLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFA 525 (978)
Q Consensus 489 ~lr~~v~~~I~~L~~aGIkv~mlTGD~~~tA~~ia~~ 525 (978)
++.++++++|+.|+++|+++.++|.-....|..+-+.
T Consensus 31 ~~~~~~~e~L~~L~~~Gi~lai~S~n~~~~a~~~l~~ 67 (320)
T TIGR01686 31 PLHKTLQEKIKTLKKQGFLLALASKNDEDDAKKVFER 67 (320)
T ss_pred ccHHHHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHh
Confidence 4568999999999999999999999999989887766
No 154
>KOG3120 consensus Predicted haloacid dehalogenase-like hydrolase [General function prediction only]
Probab=87.62 E-value=3.3 Score=42.18 Aligned_cols=40 Identities=18% Similarity=0.159 Sum_probs=33.9
Q ss_pred ccCCChHHHHHHHHHcCC-eEEEEcCCChhhHHHHHHHcCc
Q 002029 489 KLQNGVPECIDKLAQAGI-KLWVLTGDKMETAINIGFACSL 528 (978)
Q Consensus 489 ~lr~~v~~~I~~L~~aGI-kv~mlTGD~~~tA~~ia~~~gl 528 (978)
|+-|++.++|+.+++.|- .+.++|--+......+-+..|+
T Consensus 84 P~~Pgmv~lik~~ak~g~~eliIVSDaNsfFIe~~Lea~~~ 124 (256)
T KOG3120|consen 84 PIVPGMVRLIKSAAKLGCFELIIVSDANSFFIEEILEAAGI 124 (256)
T ss_pred CCCccHHHHHHHHHhCCCceEEEEecCchhHHHHHHHHccH
Confidence 678999999999999996 8999998888777777777666
No 155
>PLN02919 haloacid dehalogenase-like hydrolase family protein
Probab=87.23 E-value=2 Score=55.69 Aligned_cols=41 Identities=20% Similarity=0.024 Sum_probs=36.6
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCcc
Q 002029 489 KLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLL 529 (978)
Q Consensus 489 ~lr~~v~~~I~~L~~aGIkv~mlTGD~~~tA~~ia~~~gl~ 529 (978)
.+.+|+.+.++.|+++|+++.++|+-....+..+-+..|+.
T Consensus 161 ~~~pG~~elL~~Lk~~G~~l~IvSn~~~~~~~~~L~~~gl~ 201 (1057)
T PLN02919 161 IGFPGALELITQCKNKGLKVAVASSADRIKVDANLAAAGLP 201 (1057)
T ss_pred ccCccHHHHHHHHHhCCCeEEEEeCCcHHHHHHHHHHcCCC
Confidence 46799999999999999999999999988888887777773
No 156
>TIGR01459 HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolase, TIGR01459. This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram negative and primarily alpha proteobacteria. Only one sequence hase been annotated as other than "hypothetical." That one, from Brucella, is annotated as related to NagD, but only by sequence similarity and should be treated with some skepticism. (See comments for Class IIA subfamily)
Probab=87.01 E-value=2.6 Score=44.89 Aligned_cols=47 Identities=9% Similarity=0.133 Sum_probs=36.6
Q ss_pred EEEeeccccCCChHHHHHHHHHcCCeEEEEcCCChhhHH--HHHHHcCc
Q 002029 482 GATAVEDKLQNGVPECIDKLAQAGIKLWVLTGDKMETAI--NIGFACSL 528 (978)
Q Consensus 482 G~i~ieD~lr~~v~~~I~~L~~aGIkv~mlTGD~~~tA~--~ia~~~gl 528 (978)
|++.-.+++-|+++++++.|+++|+++.++|.-....+. ...++.|+
T Consensus 17 G~l~~~~~~~pga~e~L~~L~~~G~~~~ivTN~~~~~~~~~~~L~~~gl 65 (242)
T TIGR01459 17 GVIIDGNHTYPGAVQNLNKIIAQGKPVYFVSNSPRNIFSLHKTLKSLGI 65 (242)
T ss_pred cccccCCccCccHHHHHHHHHHCCCEEEEEeCCCCChHHHHHHHHHCCC
Confidence 555566788999999999999999999999995554333 44566666
No 157
>TIGR01675 plant-AP plant acid phosphatase. This model explicitly excludes the VSPs which lack the nucleophilc aspartate. The possibility exists, however, that some members of this family may, while containing all of the conserved HAD-superfamily catalytic residues, lack activity and have a function related to the function of the VSPs rather than the acid phosphatases.
Probab=86.25 E-value=2.9 Score=43.76 Aligned_cols=31 Identities=23% Similarity=0.273 Sum_probs=28.1
Q ss_pred cccCCChHHHHHHHHHcCCeEEEEcCCChhh
Q 002029 488 DKLQNGVPECIDKLAQAGIKLWVLTGDKMET 518 (978)
Q Consensus 488 D~lr~~v~~~I~~L~~aGIkv~mlTGD~~~t 518 (978)
-|.-+++.++++.|++.|++|+++||+....
T Consensus 119 apaip~al~l~~~l~~~G~~Vf~lTGR~e~~ 149 (229)
T TIGR01675 119 APALPEGLKLYQKIIELGIKIFLLSGRWEEL 149 (229)
T ss_pred CCCCHHHHHHHHHHHHCCCEEEEEcCCChHH
Confidence 3678999999999999999999999999755
No 158
>PF13344 Hydrolase_6: Haloacid dehalogenase-like hydrolase; PDB: 2HO4_B 1YV9_A 1WVI_B 3EPR_A 2P27_A 2OYC_A 2CFT_A 2P69_A 2CFS_A 2CFR_A ....
Probab=84.84 E-value=0.89 Score=41.14 Aligned_cols=47 Identities=17% Similarity=0.196 Sum_probs=36.2
Q ss_pred EEEeeccccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHH---HHcCc
Q 002029 482 GATAVEDKLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIG---FACSL 528 (978)
Q Consensus 482 G~i~ieD~lr~~v~~~I~~L~~aGIkv~mlTGD~~~tA~~ia---~~~gl 528 (978)
|++-..+++=||+.++|+.|+++|++++++|.....+...++ +++|+
T Consensus 7 Gvl~~g~~~ipga~e~l~~L~~~g~~~~~lTNns~~s~~~~~~~L~~~Gi 56 (101)
T PF13344_consen 7 GVLYNGNEPIPGAVEALDALRERGKPVVFLTNNSSRSREEYAKKLKKLGI 56 (101)
T ss_dssp TTSEETTEE-TTHHHHHHHHHHTTSEEEEEES-SSS-HHHHHHHHHHTTT
T ss_pred cEeEeCCCcCcCHHHHHHHHHHcCCCEEEEeCCCCCCHHHHHHHHHhcCc
Confidence 556667889999999999999999999999999877755555 44565
No 159
>PHA02597 30.2 hypothetical protein; Provisional
Probab=84.80 E-value=3.4 Score=42.30 Aligned_cols=39 Identities=13% Similarity=0.058 Sum_probs=26.3
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCc
Q 002029 489 KLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSL 528 (978)
Q Consensus 489 ~lr~~v~~~I~~L~~aGIkv~mlTGD~~~tA~~ia~~~gl 528 (978)
++.||+.++++.|++.+ +.+++|.-+..+....-+..++
T Consensus 74 ~~~pG~~e~L~~L~~~~-~~~i~Tn~~~~~~~~~~~~~~l 112 (197)
T PHA02597 74 SAYDDALDVINKLKEDY-DFVAVTALGDSIDALLNRQFNL 112 (197)
T ss_pred cCCCCHHHHHHHHHhcC-CEEEEeCCccchhHHHHhhCCH
Confidence 47899999999999975 5677776544443333334443
No 160
>COG1877 OtsB Trehalose-6-phosphatase [Carbohydrate transport and metabolism]
Probab=83.27 E-value=35 Score=36.70 Aligned_cols=168 Identities=11% Similarity=0.023 Sum_probs=89.9
Q ss_pred eeccccCCChHHHHHHHHHc-CCeEEEEcCCChhhHHHHHH--HcCccccCceEE-EEecCCCcccccchhhhHHHHHHH
Q 002029 485 AVEDKLQNGVPECIDKLAQA-GIKLWVLTGDKMETAINIGF--ACSLLRQGMRQV-IISSETPESKTLEKSEDKSAAAAA 560 (978)
Q Consensus 485 ~ieD~lr~~v~~~I~~L~~a-GIkv~mlTGD~~~tA~~ia~--~~gl~~~~~~~i-~i~~~~~~~~~~~~~~~~~~~~~~ 560 (978)
.....+-++..++++.|... ..-+||+||++.+-...... .+|++..++..+ ..++...... .......
T Consensus 36 p~~a~~~~~l~~lL~~Las~~~~~v~iiSGR~~~~l~~~~~v~~i~l~aehGa~~r~~~g~~~~~~--~~~~~~~----- 108 (266)
T COG1877 36 PEAAVPDDRLLSLLQDLASDPRNVVAIISGRSLAELERLFGVPGIGLIAEHGAEVRDPNGKWWINL--AEEADLR----- 108 (266)
T ss_pred ccccCCCHHHHHHHHHHHhcCCCeEEEEeCCCHHHHHHhcCCCCccEEEecceEEecCCCCeeEec--CHHHHhh-----
Confidence 44556777888999999887 56899999999998887765 334455554444 3333321111 0001111
Q ss_pred HHHHHHHHHHhhhhhhccccCCCCCeEEEEcCchhhhhchh--hHHHHH-----HHH-HhccCeeEEEeCCchhHHHHHH
Q 002029 561 LKASVLHQLIRGKELLDSSNESLGPLALIIDGKSLTYALED--DVKDLF-----LEL-AIGCASVICCRSSPKQKALVTR 632 (978)
Q Consensus 561 ~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~~~~--~~~~~f-----~~l-~~~~~~vi~~r~sP~qK~~iV~ 632 (978)
..+.+...+.......+++.-.....++.+.=.....-... .+.... .++ ....+.+|-+|.+-..|+.+++
T Consensus 109 ~~~~v~~~l~~~v~r~pGs~iE~K~~a~~~Hyr~a~~~~~~~~a~~~~~~~~~~~~~~v~~gk~vVEvrp~~~~KG~a~~ 188 (266)
T COG1877 109 WLKEVAAILEYYVERTPGSYIERKGFAVALHYRNAEDDEGAALALAEAATLINELKLRVTPGKMVVELRPPGVSKGAAIK 188 (266)
T ss_pred HHHHHHHHHHHHhhcCCCeEEEEcCcEEEEeeccCCchhhHHHHHHHHHhccccccEEEEeCceEEEEeeCCcchHHHHH
Confidence 11122222222222222221112222222221111100000 000000 001 1244778899988888999999
Q ss_pred HHHccCC---CeEEEEcCCcCCHHHhhhcc
Q 002029 633 LVKTKTS---STTLAIGDGANDVGMLQEAD 659 (978)
Q Consensus 633 ~lk~~~~---~~v~aiGDG~ND~~ml~~Ad 659 (978)
.+.+... ..+++.||-.-|-.|++..+
T Consensus 189 ~i~~~~~~~~~~~~~aGDD~TDE~~F~~v~ 218 (266)
T COG1877 189 YIMDELPFDGRFPIFAGDDLTDEDAFAAVN 218 (266)
T ss_pred HHHhcCCCCCCcceecCCCCccHHHHHhhc
Confidence 7766533 35899999999999999988
No 161
>COG0241 HisB Histidinol phosphatase and related phosphatases [Amino acid transport and metabolism]
Probab=82.74 E-value=4.8 Score=40.40 Aligned_cols=47 Identities=19% Similarity=0.397 Sum_probs=34.9
Q ss_pred CeeEEEeCCchh--------HHHHHHHHHcc--CCCeEEEEcCCcCCHHHhhhcccc
Q 002029 615 ASVICCRSSPKQ--------KALVTRLVKTK--TSSTTLAIGDGANDVGMLQEADIG 661 (978)
Q Consensus 615 ~~vi~~r~sP~q--------K~~iV~~lk~~--~~~~v~aiGDG~ND~~ml~~AdvG 661 (978)
..+.+|.-.|++ ...+.+.++++ .-....+|||-..|..+-..|+++
T Consensus 88 d~i~~Cph~p~~~c~cRKP~~gm~~~~~~~~~iD~~~s~~VGD~~~Dlq~a~n~gi~ 144 (181)
T COG0241 88 DGILYCPHHPEDNCDCRKPKPGMLLSALKEYNIDLSRSYVVGDRLTDLQAAENAGIK 144 (181)
T ss_pred ceEEECCCCCCCCCcccCCChHHHHHHHHHhCCCccceEEecCcHHHHHHHHHCCCC
Confidence 345667666663 56777777763 127899999999999988888887
No 162
>PRK09456 ?-D-glucose-1-phosphatase; Provisional
Probab=82.40 E-value=2.7 Score=43.21 Aligned_cols=30 Identities=23% Similarity=0.287 Sum_probs=26.5
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEcCCChhh
Q 002029 489 KLQNGVPECIDKLAQAGIKLWVLTGDKMET 518 (978)
Q Consensus 489 ~lr~~v~~~I~~L~~aGIkv~mlTGD~~~t 518 (978)
++.+|+.++++.|+++|+++.++|.-....
T Consensus 84 ~~~~g~~e~L~~l~~~g~~~~i~Sn~~~~~ 113 (199)
T PRK09456 84 ALRPEVIAIMHKLREQGHRVVVLSNTNRLH 113 (199)
T ss_pred ccCHHHHHHHHHHHhCCCcEEEEcCCchhh
Confidence 478999999999999999999999976554
No 163
>PLN02177 glycerol-3-phosphate acyltransferase
Probab=81.87 E-value=13 Score=43.88 Aligned_cols=77 Identities=12% Similarity=0.130 Sum_probs=51.1
Q ss_pred CchhHHHHHHHHHccCCCeEEEEcCCcCCHHHhhhccccccccCCccchhccccceehhchhhhHHHHHHhhhhhhhHhh
Q 002029 623 SPKQKALVTRLVKTKTSSTTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDIAIAQFRFLERLLLVHGHWCYRRIS 702 (978)
Q Consensus 623 sP~qK~~iV~~lk~~~~~~v~aiGDG~ND~~ml~~AdvGI~i~g~e~~~a~~asD~vi~~f~~l~~lll~~gR~~~~~i~ 702 (978)
.-++|..-++.... ......+.||+.||.+||+.|+-+..+..+.. . .+...+....+++..||..++=.-
T Consensus 173 ~Ge~Kv~rl~~~~g-~~~~~~aYgDS~sD~plL~~a~e~y~V~~~~~------~--~~~~~~~~~~~~fhdgrl~~~p~~ 243 (497)
T PLN02177 173 VGDHKRDAVLKEFG-DALPDLGLGDRETDHDFMSICKEGYMVPRTKC------E--PLPRNKLLSPVIFHEGRLVQRPTP 243 (497)
T ss_pred ccHHHHHHHHHHhC-CCCceEEEECCccHHHHHHhCCccEEeCCCCC------C--cCCcccCCCceeeeCCcccCCCCH
Confidence 34567766663321 12223799999999999999999998854221 1 144556677887888999887665
Q ss_pred HhHHHH
Q 002029 703 SMICYF 708 (978)
Q Consensus 703 ~~i~~~ 708 (978)
...+..
T Consensus 244 ~~~l~~ 249 (497)
T PLN02177 244 LVALLT 249 (497)
T ss_pred HHHHHH
Confidence 444444
No 164
>COG2179 Predicted hydrolase of the HAD superfamily [General function prediction only]
Probab=81.71 E-value=4 Score=39.87 Aligned_cols=39 Identities=18% Similarity=0.238 Sum_probs=35.2
Q ss_pred cCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCc
Q 002029 490 LQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSL 528 (978)
Q Consensus 490 lr~~v~~~I~~L~~aGIkv~mlTGD~~~tA~~ia~~~gl 528 (978)
.-|++.+=++.++++|+++.++|.-+...+...+..+|+
T Consensus 47 ~tpe~~~W~~e~k~~gi~v~vvSNn~e~RV~~~~~~l~v 85 (175)
T COG2179 47 ATPELRAWLAELKEAGIKVVVVSNNKESRVARAAEKLGV 85 (175)
T ss_pred CCHHHHHHHHHHHhcCCEEEEEeCCCHHHHHhhhhhcCC
Confidence 567888889999999999999999999999889988887
No 165
>PF09419 PGP_phosphatase: Mitochondrial PGP phosphatase; InterPro: IPR010021 This group of hypothetical proteins is a part of the IIIA subfamily of the haloacid dehalogenase (HAD) superfamily of hydrolases. All characterised members of this subfamily and most characterised members of the HAD superfamily are phosphatases. HAD superfamily phosphatases contain active site residues in several conserved catalytic motifs [], all of which are found conserved here. This family consists of sequences from fungi, plants, cyanobacteria, Gram-positive bacteria and Deinococcus. There is presently no characterisation of any sequence in this family.
Probab=78.57 E-value=7.7 Score=38.55 Aligned_cols=44 Identities=18% Similarity=0.206 Sum_probs=35.9
Q ss_pred eeccccCCChHHHHHHHHHcCCe--EEEEcCC-------ChhhHHHHHHHcCc
Q 002029 485 AVEDKLQNGVPECIDKLAQAGIK--LWVLTGD-------KMETAINIGFACSL 528 (978)
Q Consensus 485 ~ieD~lr~~v~~~I~~L~~aGIk--v~mlTGD-------~~~tA~~ia~~~gl 528 (978)
-=++.+-+++.+.+++|++.+.. |+++|.- ..+.|..+++.+|+
T Consensus 55 ~~~~~i~~~~~~~~~~l~~~~~~~~v~IvSNsaGs~~d~~~~~a~~~~~~lgI 107 (168)
T PF09419_consen 55 PYEDEIPPEYAEWLNELKKQFGKDRVLIVSNSAGSSDDPDGERAEALEKALGI 107 (168)
T ss_pred CCcCcCCHHHHHHHHHHHHHCCCCeEEEEECCCCcccCccHHHHHHHHHhhCC
Confidence 34678889999999999999874 9999875 36778888888775
No 166
>KOG3040 consensus Predicted sugar phosphatase (HAD superfamily) [General function prediction only]
Probab=76.90 E-value=13 Score=37.63 Aligned_cols=49 Identities=24% Similarity=0.287 Sum_probs=43.5
Q ss_pred cEEEEEEeeccccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHc
Q 002029 478 LILLGATAVEDKLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFAC 526 (978)
Q Consensus 478 l~llG~i~ieD~lr~~v~~~I~~L~~aGIkv~mlTGD~~~tA~~ia~~~ 526 (978)
+.+-|++-+||-.-|++.|+++.|++++.+|..+|.-+.+.-..+..++
T Consensus 12 lDlSGtLh~e~~avpga~eAl~rLr~~~~kVkFvTNttk~Sk~~l~~rL 60 (262)
T KOG3040|consen 12 LDLSGTLHIEDAAVPGAVEALKRLRDQHVKVKFVTNTTKESKRNLHERL 60 (262)
T ss_pred EeccceEecccccCCCHHHHHHHHHhcCceEEEEecCcchhHHHHHHHH
Confidence 4567999999999999999999999999999999999888877777653
No 167
>PRK10444 UMP phosphatase; Provisional
Probab=75.06 E-value=3.3 Score=44.26 Aligned_cols=45 Identities=18% Similarity=0.283 Sum_probs=40.3
Q ss_pred EEEeeccccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHc
Q 002029 482 GATAVEDKLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFAC 526 (978)
Q Consensus 482 G~i~ieD~lr~~v~~~I~~L~~aGIkv~mlTGD~~~tA~~ia~~~ 526 (978)
|++--.+.+-|++.++|+.|+++|++++++||....+...+++++
T Consensus 10 GtL~~~~~~~p~a~~~l~~L~~~g~~~~~~Tn~~~~~~~~~~~~l 54 (248)
T PRK10444 10 GVLMHDNVAVPGAAEFLHRILDKGLPLVLLTNYPSQTGQDLANRF 54 (248)
T ss_pred CceEeCCeeCccHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHH
Confidence 666667788999999999999999999999999999988888775
No 168
>TIGR01684 viral_ppase viral phosphatase. These proteins also include an N-terminal domain (ca. 125 aas) that is unique to this clade.
Probab=74.65 E-value=4.2 Score=43.88 Aligned_cols=41 Identities=12% Similarity=0.152 Sum_probs=37.9
Q ss_pred cC-CChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCccc
Q 002029 490 LQ-NGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLR 530 (978)
Q Consensus 490 lr-~~v~~~I~~L~~aGIkv~mlTGD~~~tA~~ia~~~gl~~ 530 (978)
+| |++.+++++|+++|+++.++|+-..+.+...-+++||..
T Consensus 146 irdPgV~EaL~~LkekGikLaIaTS~~Re~v~~~L~~lGLd~ 187 (301)
T TIGR01684 146 IRDPRIYDSLTELKKRGCILVLWSYGDRDHVVESMRKVKLDR 187 (301)
T ss_pred cCCHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHcCCCc
Confidence 56 999999999999999999999999999999999999954
No 169
>TIGR01458 HAD-SF-IIA-hyp3 HAD-superfamily subfamily IIA hydrolase, TIGR01458. This hypothetical equivalog is a member of the IIA subfamily (TIGR01460) of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. One sequence (GP|10716807) has been annotated as a "phospholysine phosphohistidine inorganic pyrophosphatase," probably in reference to studies on similarly described (but unsequenced) enzymes from bovine and rat tissues. However, the supporting information for this annotation has never been published.
Probab=74.42 E-value=5 Score=43.14 Aligned_cols=47 Identities=19% Similarity=0.262 Sum_probs=36.6
Q ss_pred EEEeeccc----cCCChHHHHHHHHHcCCeEEEEcCCChhh---HHHHHHHcCc
Q 002029 482 GATAVEDK----LQNGVPECIDKLAQAGIKLWVLTGDKMET---AINIGFACSL 528 (978)
Q Consensus 482 G~i~ieD~----lr~~v~~~I~~L~~aGIkv~mlTGD~~~t---A~~ia~~~gl 528 (978)
|++--.+. +-|++.++|+.|+++|++++++||....+ ......++|+
T Consensus 10 Gtl~~~~~~~~~~~~~a~~al~~l~~~G~~~~~~Tn~~~~~~~~~~~~l~~~g~ 63 (257)
T TIGR01458 10 GVLYISDAKSGVAVPGSQEAVKRLRGASVKVRFVTNTTKESKQDLLERLQRLGF 63 (257)
T ss_pred CeEEeCCCcccCcCCCHHHHHHHHHHCCCeEEEEECCCCCCHHHHHHHHHHcCC
Confidence 44555555 78899999999999999999999988776 3444455665
No 170
>PLN02645 phosphoglycolate phosphatase
Probab=73.30 E-value=5.5 Score=44.21 Aligned_cols=47 Identities=34% Similarity=0.456 Sum_probs=40.2
Q ss_pred EEEeeccccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHH---HHcCc
Q 002029 482 GATAVEDKLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIG---FACSL 528 (978)
Q Consensus 482 G~i~ieD~lr~~v~~~I~~L~~aGIkv~mlTGD~~~tA~~ia---~~~gl 528 (978)
|++--.+.+-++++++|+.|++.|++++++|+....+...++ +++|+
T Consensus 37 Gtl~~~~~~~~ga~e~l~~lr~~g~~~~~~TN~~~~~~~~~~~~l~~lGi 86 (311)
T PLN02645 37 GVIWKGDKLIEGVPETLDMLRSMGKKLVFVTNNSTKSRAQYGKKFESLGL 86 (311)
T ss_pred CCeEeCCccCcCHHHHHHHHHHCCCEEEEEeCCCCCCHHHHHHHHHHCCC
Confidence 666666788899999999999999999999999988877777 55776
No 171
>TIGR01993 Pyr-5-nucltdase pyrimidine 5'-nucleotidase. These enzymes are members of the haloacid dehalogenase (HAD) superfamily of hydrolases, specifically the IA subfamily (variant 3, TIGR01509).
Probab=72.46 E-value=8.9 Score=38.66 Aligned_cols=38 Identities=11% Similarity=-0.020 Sum_probs=31.9
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCcc
Q 002029 489 KLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLL 529 (978)
Q Consensus 489 ~lr~~v~~~I~~L~~aGIkv~mlTGD~~~tA~~ia~~~gl~ 529 (978)
++.+|+.++++.|+ .+++++|+-....+..+....|+.
T Consensus 84 ~~~~g~~~~L~~L~---~~~~i~Tn~~~~~~~~~l~~~gl~ 121 (184)
T TIGR01993 84 KPDPELRNLLLRLP---GRKIIFTNGDRAHARRALNRLGIE 121 (184)
T ss_pred CCCHHHHHHHHhCC---CCEEEEeCCCHHHHHHHHHHcCcH
Confidence 46789999999997 489999998888888888888873
No 172
>PRK10725 fructose-1-P/6-phosphogluconate phosphatase; Provisional
Probab=71.49 E-value=9.7 Score=38.45 Aligned_cols=37 Identities=16% Similarity=0.001 Sum_probs=31.0
Q ss_pred CCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCcc
Q 002029 491 QNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLL 529 (978)
Q Consensus 491 r~~v~~~I~~L~~aGIkv~mlTGD~~~tA~~ia~~~gl~ 529 (978)
-+ ..++++.|++. +++.++||.....+..+-+..|+.
T Consensus 90 ~~-~~e~L~~L~~~-~~l~I~T~~~~~~~~~~l~~~~l~ 126 (188)
T PRK10725 90 LP-LIEVVKAWHGR-RPMAVGTGSESAIAEALLAHLGLR 126 (188)
T ss_pred cc-HHHHHHHHHhC-CCEEEEcCCchHHHHHHHHhCCcH
Confidence 34 46899999865 899999999999999888888874
No 173
>PHA03398 viral phosphatase superfamily protein; Provisional
Probab=70.58 E-value=6.1 Score=42.76 Aligned_cols=40 Identities=18% Similarity=0.141 Sum_probs=36.3
Q ss_pred cC-CChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCcc
Q 002029 490 LQ-NGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLL 529 (978)
Q Consensus 490 lr-~~v~~~I~~L~~aGIkv~mlTGD~~~tA~~ia~~~gl~ 529 (978)
+| |++.+++++|+++|+++.++|+...+.+..+....|+.
T Consensus 148 irdp~V~EtL~eLkekGikLaIvTNg~Re~v~~~Le~lgL~ 188 (303)
T PHA03398 148 IRDPFVYDSLDELKERGCVLVLWSYGNREHVVHSLKETKLE 188 (303)
T ss_pred cCChhHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHcCCC
Confidence 45 89999999999999999999988888888999999984
No 174
>TIGR01457 HAD-SF-IIA-hyp2 HAD-superfamily subfamily IIA hydrolase, TIGR01457. This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram positive (low-GC) bacteria. Sequences found in this model are annotated variously as related to NagD or 4-nitrophenyl phosphatase, and this hypothetical equivalog, of all of those within the Class IIA subfamily, is most closely related to the E. coli NagD enzyme and the PGP_euk equivalog (TIGR01452). However, there is presently no evidence that this hypothetical equivalog has the same function of either those.
Probab=69.66 E-value=9.1 Score=40.93 Aligned_cols=48 Identities=10% Similarity=0.095 Sum_probs=39.2
Q ss_pred EEEeeccccCCChHHHHHHHHHcCCeEEEEcC---CChhhHHHHHHHcCcc
Q 002029 482 GATAVEDKLQNGVPECIDKLAQAGIKLWVLTG---DKMETAINIGFACSLL 529 (978)
Q Consensus 482 G~i~ieD~lr~~v~~~I~~L~~aGIkv~mlTG---D~~~tA~~ia~~~gl~ 529 (978)
|++--.+.+-+++.++|++|++.|++++++|| +..+......+++|+-
T Consensus 10 Gtl~~~~~~i~~a~~~l~~l~~~g~~~~~~Tnn~~r~~~~~~~~l~~~g~~ 60 (249)
T TIGR01457 10 GTMYKGKERIPEAETFVHELQKRDIPYLFVTNNSTRTPESVAEMLASFDIP 60 (249)
T ss_pred CceEcCCeeCcCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHcCCC
Confidence 44445567778999999999999999999996 6777777777888873
No 175
>PF06570 DUF1129: Protein of unknown function (DUF1129); InterPro: IPR009214 There are currently no experimental data for members of this group or their homologues. However, these proteins contain predicted integral membrane proteins (with several transmembrane segments).
Probab=67.14 E-value=1.2e+02 Score=31.28 Aligned_cols=25 Identities=12% Similarity=0.299 Sum_probs=14.1
Q ss_pred HHHHHHHHHHHHHHHHHHHhccCcc
Q 002029 853 QHLFIWGGITFWYIFLLAYGAMDPY 877 (978)
Q Consensus 853 ~~~~i~~si~~~~i~~~i~~~i~~~ 877 (978)
.....++.+++|+++..+...+|+.
T Consensus 149 ~~~~~~~~~~~w~~~~~~~~~lp~~ 173 (206)
T PF06570_consen 149 YILISVLAMVLWIVIFVLTSFLPPV 173 (206)
T ss_pred HHHHHHHHHHHHHHHHHHHHHcccc
Confidence 3334445566666666655566653
No 176
>PF03767 Acid_phosphat_B: HAD superfamily, subfamily IIIB (Acid phosphatase); InterPro: IPR005519 This family of class B acid phosphatases also contains a number of vegetative storage proteins (VPS25). The acid phosphatase activity of VPS has been experimentally demonstrated [].; GO: 0003993 acid phosphatase activity; PDB: 3PCT_C 2I34_A 2I33_A 1Z5U_D 1Z5G_A 2AUT_C 1Z88_B 3OCV_A 3OCZ_A 3OCX_A ....
Probab=66.63 E-value=12 Score=39.31 Aligned_cols=30 Identities=20% Similarity=0.295 Sum_probs=27.1
Q ss_pred cccCCChHHHHHHHHHcCCeEEEEcCCChh
Q 002029 488 DKLQNGVPECIDKLAQAGIKLWVLTGDKME 517 (978)
Q Consensus 488 D~lr~~v~~~I~~L~~aGIkv~mlTGD~~~ 517 (978)
++.-|++.+.++.+++.|++|..+||++..
T Consensus 114 ~~aip~a~~l~~~~~~~G~~V~~iT~R~~~ 143 (229)
T PF03767_consen 114 APAIPGALELYNYARSRGVKVFFITGRPES 143 (229)
T ss_dssp GEEETTHHHHHHHHHHTTEEEEEEEEEETT
T ss_pred CcccHHHHHHHHHHHHCCCeEEEEecCCch
Confidence 466789999999999999999999999865
No 177
>COG0637 Predicted phosphatase/phosphohexomutase [General function prediction only]
Probab=66.42 E-value=20 Score=37.57 Aligned_cols=43 Identities=28% Similarity=0.237 Sum_probs=39.3
Q ss_pred cccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCccc
Q 002029 488 DKLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLR 530 (978)
Q Consensus 488 D~lr~~v~~~I~~L~~aGIkv~mlTGD~~~tA~~ia~~~gl~~ 530 (978)
.++.+|+.++++.|++.|+++.+.|+-....+..+....|+..
T Consensus 85 ~~~~pGv~~~l~~L~~~~i~~avaS~s~~~~~~~~L~~~gl~~ 127 (221)
T COG0637 85 LKPIPGVVELLEQLKARGIPLAVASSSPRRAAERVLARLGLLD 127 (221)
T ss_pred CCCCccHHHHHHHHHhcCCcEEEecCChHHHHHHHHHHccChh
Confidence 4789999999999999999999999999999999998888854
No 178
>TIGR02251 HIF-SF_euk Dullard-like phosphatase domain. This domain is related to domains found in FCP1-like phosphatases (TIGR02250), and together both are detected by the Pfam model pfam03031.
Probab=62.50 E-value=6.3 Score=39.07 Aligned_cols=43 Identities=16% Similarity=0.021 Sum_probs=37.9
Q ss_pred eeccccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCc
Q 002029 485 AVEDKLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSL 528 (978)
Q Consensus 485 ~ieD~lr~~v~~~I~~L~~aGIkv~mlTGD~~~tA~~ia~~~gl 528 (978)
.+.=..|||+.+.++.|.+. ..+.+.|.-....|..+...++.
T Consensus 38 ~~~v~~RPgl~eFL~~l~~~-yei~I~Ts~~~~yA~~il~~ldp 80 (162)
T TIGR02251 38 PVYVFKRPHVDEFLERVSKW-YELVIFTASLEEYADPVLDILDR 80 (162)
T ss_pred EEEEEECCCHHHHHHHHHhc-CEEEEEcCCcHHHHHHHHHHHCc
Confidence 44447999999999999987 99999999999999999987764
No 179
>TIGR01663 PNK-3'Pase polynucleotide 5'-kinase 3'-phosphatase. Note that the EC number for the kinase function is: 2.7.1.78
Probab=61.20 E-value=24 Score=41.87 Aligned_cols=27 Identities=22% Similarity=0.432 Sum_probs=24.2
Q ss_pred cCCChHHHHHHHHHcCCeEEEEcCCCh
Q 002029 490 LQNGVPECIDKLAQAGIKLWVLTGDKM 516 (978)
Q Consensus 490 lr~~v~~~I~~L~~aGIkv~mlTGD~~ 516 (978)
+-++++++++.|+++|++++++|.-..
T Consensus 198 l~pgV~e~L~~L~~~Gy~IvIvTNQ~g 224 (526)
T TIGR01663 198 IFPEIPEKLKELEADGFKICIFTNQGG 224 (526)
T ss_pred cccCHHHHHHHHHHCCCEEEEEECCcc
Confidence 469999999999999999999998544
No 180
>TIGR01689 EcbF-BcbF capsule biosynthesis phosphatase. Due to the likelihood that the substrates of these enzymes are different depending on the nature of the particular polysaccharides associated with each species, this model has been classified as a subfamily despite the close homology.
Probab=58.55 E-value=8.6 Score=36.27 Aligned_cols=33 Identities=15% Similarity=0.079 Sum_probs=29.2
Q ss_pred cccCCChHHHHHHHHHcCCeEEEEcCCChhhHH
Q 002029 488 DKLQNGVPECIDKLAQAGIKLWVLTGDKMETAI 520 (978)
Q Consensus 488 D~lr~~v~~~I~~L~~aGIkv~mlTGD~~~tA~ 520 (978)
+++.+++.++++.++++|++++++||+......
T Consensus 23 ~~~~~~~ie~L~~l~~~G~~IiiaTGR~~~~~~ 55 (126)
T TIGR01689 23 VAPILAVIEKLRHYKALGFEIVISSSRNMRTYE 55 (126)
T ss_pred cccCHHHHHHHHHHHHCCCEEEEECCCCchhhh
Confidence 567889999999999999999999999987654
No 181
>TIGR01458 HAD-SF-IIA-hyp3 HAD-superfamily subfamily IIA hydrolase, TIGR01458. This hypothetical equivalog is a member of the IIA subfamily (TIGR01460) of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. One sequence (GP|10716807) has been annotated as a "phospholysine phosphohistidine inorganic pyrophosphatase," probably in reference to studies on similarly described (but unsequenced) enzymes from bovine and rat tissues. However, the supporting information for this annotation has never been published.
Probab=57.39 E-value=20 Score=38.56 Aligned_cols=53 Identities=19% Similarity=0.314 Sum_probs=34.2
Q ss_pred CCCeEEEEcCCc-CCHHHhhhccccc-cc-cCCc----cchhccccceehhchhhhHHHH
Q 002029 638 TSSTTLAIGDGA-NDVGMLQEADIGV-GI-SGVE----GMQAVMSSDIAIAQFRFLERLL 690 (978)
Q Consensus 638 ~~~~v~aiGDG~-ND~~ml~~AdvGI-~i-~g~e----~~~a~~asD~vi~~f~~l~~ll 690 (978)
....++||||.. +|+.+=+.+++-- .+ .|.. .......+|+++.++..+..++
T Consensus 195 ~~~~~~~vGD~~~~Di~~a~~~G~~~i~v~~G~~~~~~~~~~~~~pd~~~~sl~el~~~l 254 (257)
T TIGR01458 195 EPEEAVMIGDDCRDDVGGAQDCGMRGIQVRTGKYRPSDEEKINVPPDLTCDSLPHAVDLI 254 (257)
T ss_pred ChhhEEEECCCcHHHHHHHHHcCCeEEEECCCCCChHHhcccCCCCCEEECCHHHHHHHH
Confidence 347899999996 8999888887743 33 2321 1112235688888777666553
No 182
>PLN03063 alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional
Probab=53.27 E-value=4e+02 Score=33.81 Aligned_cols=45 Identities=13% Similarity=-0.012 Sum_probs=33.4
Q ss_pred cCCChHHHHHHHHHc-CCeEEEEcCCChhhHHHHHHH--cCccccCce
Q 002029 490 LQNGVPECIDKLAQA-GIKLWVLTGDKMETAINIGFA--CSLLRQGMR 534 (978)
Q Consensus 490 lr~~v~~~I~~L~~a-GIkv~mlTGD~~~tA~~ia~~--~gl~~~~~~ 534 (978)
+-+++.++++.|.+. +..|+++||+..++....... ++++..++.
T Consensus 533 p~~~l~~~L~~L~~d~~~~V~IvSGR~~~~L~~~~~~~~l~l~aeHG~ 580 (797)
T PLN03063 533 LHPELKETLKALCSDPKTTVVVLSRSGKDILDKNFGEYNIWLAAENGM 580 (797)
T ss_pred CCHHHHHHHHHHHcCCCCEEEEEeCCCHHHHHHHhCCCCCcEEEeCCE
Confidence 445677888888765 689999999999998887755 345554443
No 183
>TIGR01680 Veg_Stor_Prot vegetative storage protein. The proteins represented by this model are close relatives of the plant acid phosphatases (TIGR01675), are limited to members of the Phaseoleae including Glycine max (soybean) and Phaseolus vulgaris (kidney bean). These proteins are highly expressed in the leaves of repeatedly depodded plants. VSP differs most strinkingly from the acid phosphatases in the lack of the conserved nucleophilic aspartate residue in the N-terminus, thus, they should be inactive as phosphatases. This issue was confused by the publication in 1992 of an article claiming activity for the Glycine max VSP. In 1994 this assertion was refuted by the separation of the activity from the VSP.
Probab=51.92 E-value=60 Score=34.89 Aligned_cols=31 Identities=23% Similarity=0.281 Sum_probs=27.4
Q ss_pred ccccCCChHHHHHHHHHcCCeEEEEcCCChh
Q 002029 487 EDKLQNGVPECIDKLAQAGIKLWVLTGDKME 517 (978)
Q Consensus 487 eD~lr~~v~~~I~~L~~aGIkv~mlTGD~~~ 517 (978)
+.|.-+++.+..+.+++.|++|+++||+...
T Consensus 143 ~ApAlp~al~ly~~l~~~G~kIf~VSgR~e~ 173 (275)
T TIGR01680 143 EAPALPETLKNYNKLVSLGFKIIFLSGRLKD 173 (275)
T ss_pred cCCCChHHHHHHHHHHHCCCEEEEEeCCchh
Confidence 4566789999999999999999999999864
No 184
>PTZ00445 p36-lilke protein; Provisional
Probab=51.23 E-value=22 Score=36.51 Aligned_cols=29 Identities=21% Similarity=0.139 Sum_probs=25.3
Q ss_pred cCCChHHHHHHHHHcCCeEEEEcCCChhh
Q 002029 490 LQNGVPECIDKLAQAGIKLWVLTGDKMET 518 (978)
Q Consensus 490 lr~~v~~~I~~L~~aGIkv~mlTGD~~~t 518 (978)
++|+.+.-++.|+++||+|.++|=-.+++
T Consensus 76 ~tpefk~~~~~l~~~~I~v~VVTfSd~~~ 104 (219)
T PTZ00445 76 VTPDFKILGKRLKNSNIKISVVTFSDKEL 104 (219)
T ss_pred CCHHHHHHHHHHHHCCCeEEEEEccchhh
Confidence 68999999999999999999999655544
No 185
>PRK10748 flavin mononucleotide phosphatase; Provisional
Probab=49.66 E-value=36 Score=36.04 Aligned_cols=28 Identities=14% Similarity=0.280 Sum_probs=23.1
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEcCCChh
Q 002029 489 KLQNGVPECIDKLAQAGIKLWVLTGDKME 517 (978)
Q Consensus 489 ~lr~~v~~~I~~L~~aGIkv~mlTGD~~~ 517 (978)
++-||++++++.|++. +++.++|.-+..
T Consensus 113 ~~~~gv~~~L~~L~~~-~~l~i~Tn~~~~ 140 (238)
T PRK10748 113 DVPQATHDTLKQLAKK-WPLVAITNGNAQ 140 (238)
T ss_pred CCCccHHHHHHHHHcC-CCEEEEECCCch
Confidence 4668999999999875 899999986543
No 186
>TIGR01452 PGP_euk phosphoglycolate/pyridoxal phosphate phosphatase family. This model is closely related to a family of bacterial sequences including the E. coli NagD and B. subtilus AraL genes which are characterized by the ability to hydrolyze para-nitrophenylphosphate (pNPPases or NPPases). The chlamydomonas PGPase does not catalyze this reaction and so presumably these two groups have different functions and substrate specificities. Many of the genes in this alignment have been annotated as pNPPases due to this association.
Probab=49.58 E-value=20 Score=39.00 Aligned_cols=48 Identities=21% Similarity=0.301 Sum_probs=36.0
Q ss_pred EEEeeccccCCChHHHHHHHHHcCCeEEEEcCCChhhHHH---HHHHcCcc
Q 002029 482 GATAVEDKLQNGVPECIDKLAQAGIKLWVLTGDKMETAIN---IGFACSLL 529 (978)
Q Consensus 482 G~i~ieD~lr~~v~~~I~~L~~aGIkv~mlTGD~~~tA~~---ia~~~gl~ 529 (978)
|++.-.+.+-+++.++|++|++.|++++++||....+... --+++|+.
T Consensus 11 Gtl~~~~~~~~ga~e~l~~L~~~g~~~~~~Tnns~~~~~~~~~~l~~~G~~ 61 (279)
T TIGR01452 11 GVLWLGERVVPGAPELLDRLARAGKAALFVTNNSTKSRAEYALKFARLGFN 61 (279)
T ss_pred CceEcCCeeCcCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHcCCC
Confidence 4444467788899999999999999999999976544433 33556763
No 187
>COG0647 NagD Predicted sugar phosphatases of the HAD superfamily [Carbohydrate transport and metabolism]
Probab=47.69 E-value=24 Score=37.97 Aligned_cols=46 Identities=17% Similarity=0.197 Sum_probs=40.3
Q ss_pred EEEEeeccccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHc
Q 002029 481 LGATAVEDKLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFAC 526 (978)
Q Consensus 481 lG~i~ieD~lr~~v~~~I~~L~~aGIkv~mlTGD~~~tA~~ia~~~ 526 (978)
=|++---+.+=|++.++|+.|+++|++++.+|.-...+...++.++
T Consensus 16 DGvl~~G~~~ipga~e~l~~L~~~g~~~iflTNn~~~s~~~~~~~L 61 (269)
T COG0647 16 DGVLYRGNEAIPGAAEALKRLKAAGKPVIFLTNNSTRSREVVAARL 61 (269)
T ss_pred cCceEeCCccCchHHHHHHHHHHcCCeEEEEeCCCCCCHHHHHHHH
Confidence 3788888999999999999999999999999999998888555543
No 188
>TIGR02468 sucrsPsyn_pln sucrose phosphate synthase/possible sucrose phosphate phosphatase, plant. Members of this family are sucrose-phosphate synthases of plants. This enzyme is known to exist in multigene families in several species of both monocots and dicots. The N-terminal domain is the glucosyltransferase domain. Members of this family also have a variable linker region and a C-terminal domain that resembles sucrose phosphate phosphatase (SPP) (EC 3.1.3.24) (see TIGR01485), the next and final enzyme of sucrose biosynthesis. The SPP-like domain likely serves a binding and not a catalytic function, as the reported SPP is always encoded by a distinct protein.
Probab=46.28 E-value=2.3e+02 Score=36.64 Aligned_cols=64 Identities=20% Similarity=0.427 Sum_probs=45.0
Q ss_pred hHHHHHHHHHhccCeeEEEe------CCch--hHHHHHHHHHccCC----CeEEEEcCCcC-C-HHHhhhccccccccC
Q 002029 602 DVKDLFLELAIGCASVICCR------SSPK--QKALVTRLVKTKTS----STTLAIGDGAN-D-VGMLQEADIGVGISG 666 (978)
Q Consensus 602 ~~~~~f~~l~~~~~~vi~~r------~sP~--qK~~iV~~lk~~~~----~~v~aiGDG~N-D-~~ml~~AdvGI~i~g 666 (978)
++.+.+..-...|+.+ +|+ +-|. .|.+.++.|..+.| +++.++||+.| | ..|+.--|-+|=+.|
T Consensus 925 elr~~Lr~~gLr~~~i-ys~~~~~LDVlP~~ASKgqAlRyL~~rwgi~l~~v~VfaGdSGntD~e~Ll~G~~~tvi~~g 1002 (1050)
T TIGR02468 925 ELRKLLRIQGLRCHAV-YCRNGTRLNVIPLLASRSQALRYLFVRWGIELANMAVFVGESGDTDYEGLLGGLHKTVILKG 1002 (1050)
T ss_pred HHHHHHHhCCCceEEE-eecCCcEeeeeeCCCCHHHHHHHHHHHcCCChHHeEEEeccCCCCCHHHHhCCceeEEEEec
Confidence 5666666666677743 443 3454 69999999987644 56677999999 9 567778888884444
No 189
>cd02071 MM_CoA_mut_B12_BD methylmalonyl CoA mutase B12 binding domain. This domain binds to B12 (adenosylcobamide), which initiates the conversion of succinyl CoA and methylmalonyl CoA by forming an adenosyl radical, which then undergoes a rearrangement exchanging a hydrogen atom with a group attached to a neighboring carbon atom. This family is present in both mammals and bacteria. Bacterial members are heterodimers and involved in the fermentation of pyruvate to propionate. Mammalian members are homodimers and responsible for the conversion of odd-chain fatty acids and branched-chain amino acids via propionyl CoA to succinyl CoA for further degradation.
Probab=45.59 E-value=64 Score=30.12 Aligned_cols=80 Identities=18% Similarity=0.232 Sum_probs=56.9
Q ss_pred HHHHccceeEeeEEEeCCHHHHHHHHHHHHHHhhcccccHHHHHHHHHHHhhcccEEEEEEeeccccCCChHHHHHHHHH
Q 002029 424 EYADAGLRTLILAYRELDEKEYKQFNEEFTEAKNSVSADREELAEEIAEKIEKNLILLGATAVEDKLQNGVPECIDKLAQ 503 (978)
Q Consensus 424 ~~a~~Glr~l~~A~r~l~~~e~~~~~~~~~~a~~~l~~~r~~~~~~~~~~ie~dl~llG~i~ieD~lr~~v~~~I~~L~~ 503 (978)
-+...|++|+.++.. .+.++..+ .-.+.+-.++++.+......+.+++.++.|++
T Consensus 22 ~l~~~G~~vi~lG~~-vp~e~~~~------------------------~a~~~~~d~V~iS~~~~~~~~~~~~~~~~L~~ 76 (122)
T cd02071 22 ALRDAGFEVIYTGLR-QTPEEIVE------------------------AAIQEDVDVIGLSSLSGGHMTLFPEVIELLRE 76 (122)
T ss_pred HHHHCCCEEEECCCC-CCHHHHHH------------------------HHHHcCCCEEEEcccchhhHHHHHHHHHHHHh
Confidence 468899999999865 44433221 12246777888888888889999999999999
Q ss_pred cCC-eE-EEEcCCChhhHHHHHHHcCc
Q 002029 504 AGI-KL-WVLTGDKMETAINIGFACSL 528 (978)
Q Consensus 504 aGI-kv-~mlTGD~~~tA~~ia~~~gl 528 (978)
+|. ++ +++-|....--.+-.++.|+
T Consensus 77 ~~~~~i~i~~GG~~~~~~~~~~~~~G~ 103 (122)
T cd02071 77 LGAGDILVVGGGIIPPEDYELLKEMGV 103 (122)
T ss_pred cCCCCCEEEEECCCCHHHHHHHHHCCC
Confidence 977 43 55666555444566668886
No 190
>cd02067 B12-binding B12 binding domain (B12-BD). This domain binds different cobalamid derivates, like B12 (adenosylcobamide) or methylcobalamin or methyl-Co(III) 5-hydroxybenzimidazolylcobamide, it is found in several enzymes, such as glutamate mutase, methionine synthase and methylmalonyl-CoA mutase. Cobalamin undergoes a conformational change on binding the protein; the dimethylbenzimidazole group, which is coordinated to the cobalt in the free cofactor, moves away from the corrin and is replaced by a histidine contributed by the protein. The sequence Asp-X-His-X-X-Gly, which contains this histidine ligand, is conserved in many cobalamin-binding proteins.
Probab=43.59 E-value=79 Score=29.16 Aligned_cols=80 Identities=16% Similarity=0.243 Sum_probs=56.2
Q ss_pred HHHHccceeEeeEEEeCCHHHHHHHHHHHHHHhhcccccHHHHHHHHHHHhhcccEEEEEEeeccccCCChHHHHHHHHH
Q 002029 424 EYADAGLRTLILAYRELDEKEYKQFNEEFTEAKNSVSADREELAEEIAEKIEKNLILLGATAVEDKLQNGVPECIDKLAQ 503 (978)
Q Consensus 424 ~~a~~Glr~l~~A~r~l~~~e~~~~~~~~~~a~~~l~~~r~~~~~~~~~~ie~dl~llG~i~ieD~lr~~v~~~I~~L~~ 503 (978)
-+...|++|+.+.. .++.+++.+. -.+.+-.++|+....+.--+.+++.++.+|+
T Consensus 22 ~l~~~G~~V~~lg~-~~~~~~l~~~------------------------~~~~~pdvV~iS~~~~~~~~~~~~~i~~l~~ 76 (119)
T cd02067 22 ALRDAGFEVIDLGV-DVPPEEIVEA------------------------AKEEDADAIGLSGLLTTHMTLMKEVIEELKE 76 (119)
T ss_pred HHHHCCCEEEECCC-CCCHHHHHHH------------------------HHHcCCCEEEEeccccccHHHHHHHHHHHHH
Confidence 45689999988873 3555544321 1246777899988877778999999999999
Q ss_pred cCC-eE-EEEcCCChhhHHHHHHHcCc
Q 002029 504 AGI-KL-WVLTGDKMETAINIGFACSL 528 (978)
Q Consensus 504 aGI-kv-~mlTGD~~~tA~~ia~~~gl 528 (978)
.+- ++ +++-|-.....-..+++.|.
T Consensus 77 ~~~~~~~i~vGG~~~~~~~~~~~~~G~ 103 (119)
T cd02067 77 AGLDDIPVLVGGAIVTRDFKFLKEIGV 103 (119)
T ss_pred cCCCCCeEEEECCCCChhHHHHHHcCC
Confidence 986 44 56666554433456777775
No 191
>TIGR01522 ATPase-IIA2_Ca golgi membrane calcium-translocating P-type ATPase. The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1 the former of which is modelled by TIGR01116.
Probab=43.12 E-value=2.1e+02 Score=36.85 Aligned_cols=36 Identities=14% Similarity=0.030 Sum_probs=24.1
Q ss_pred ccccCCCCCCcCHHHHHHHHH-HHHHHHHHHHHHHHH
Q 002029 71 FQNSTGPPSKRSKVERRMDKI-IYFLFGILVLMSFIG 106 (978)
Q Consensus 71 ~~~~~~~~~k~s~l~~~~n~~-~~~~~~~~~~~~~i~ 106 (978)
+.|.-..+.++|.+...++.+ ...+.+++++.++++
T Consensus 38 G~N~i~~~~~~s~~~~~l~~~~~~~~~~~L~~aa~ls 74 (884)
T TIGR01522 38 GWNEFDVEEDESLWKKFLSQFVKNPLILLLIASAVIS 74 (884)
T ss_pred CCCcCCCCCCCCHHHHHHHHHhhChHHHHHHHHHHHH
Confidence 667666677788889888888 455555555444444
No 192
>COG4858 Uncharacterized membrane-bound protein conserved in bacteria [Function unknown]
Probab=42.70 E-value=1.3e+02 Score=29.98 Aligned_cols=34 Identities=12% Similarity=0.097 Sum_probs=26.1
Q ss_pred cchhhHHHHHHHHHHHHHHHHHHHHhccCccccc
Q 002029 847 TYFTYIQHLFIWGGITFWYIFLLAYGAMDPYIST 880 (978)
Q Consensus 847 ~~~~~~~~~~i~~si~~~~i~~~i~~~i~~~~~~ 880 (978)
|.|+|-......+++++|+++.++-.++|..++.
T Consensus 158 r~~~~K~~lv~~~sm~lWi~v~i~t~~lPtslN~ 191 (226)
T COG4858 158 RPGTWKYLLVAVLSMLLWIAVMIATVFLPTSLNP 191 (226)
T ss_pred CCchHHHHHHHHHHHHHHHHHHHHHhhCCCcCCc
Confidence 4566767777788999999988888888876544
No 193
>TIGR01517 ATPase-IIB_Ca plasma-membrane calcium-translocating P-type ATPase. The calcium P-type ATPases have been characterized as Type IIB based on a phylogenetic analysis which distinguishes this group from the Type IIA SERCA calcium pump. A separate analysis divides Type IIA into sub-types (SERCA and PMR1), which are modelled by the corresponding TIGR01116 and TIGR01522. This model is well separated from the two others.
Probab=42.47 E-value=3.4e+02 Score=35.19 Aligned_cols=38 Identities=8% Similarity=-0.002 Sum_probs=25.7
Q ss_pred ccccCCCCCCcCHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 002029 71 FQNSTGPPSKRSKVERRMDKIIYFLFGILVLMSFIGSI 108 (978)
Q Consensus 71 ~~~~~~~~~k~s~l~~~~n~~~~~~~~~~~~~~~i~~i 108 (978)
+.|.-..+.+++.+...++.+...+.+++++.++++.+
T Consensus 74 G~N~l~~~~~~s~~~~~~~~f~~~~~~~l~~~ails~~ 111 (941)
T TIGR01517 74 GKNELPEKPPKSFLQIVWAALSDQTLILLSVAAVVSLV 111 (941)
T ss_pred CCCCCCCCCCCCHHHHHHHHHhCHHHHHHHHHHHHHHH
Confidence 66766666777888888888777665555555555543
No 194
>TIGR01493 HAD-SF-IA-v2 Haloacid dehalogenase superfamily, subfamily IA, variant 2 with 3rd motif like haloacid dehalogenase. The Subfamily IA and IB capping domains are predicted by PSI-PRED to consist of an alpha helical bundle. Subfamily I encompasses such a wide region of sequence space (the sequences are highly divergent) that modelling it with a single alignment is impossible, resulting in an overly broad description which allows in many unrelated sequences. Subfamily IA and IB are separated based on an aparrent phylogenetic bifurcation. Subfamily IA is still too broad to model, but cannot be further subdivided into large chunks based on phylogenetic trees. Of the three motifs defining the HAD superfamily, the third has three variant forms : (1) hhhhsDxxx(x)D, (2) hhhhssxxx(x)D and (3) hhhhDDxxx(x)s where _s_ refers to a small amino acid and _h_ to a hydrophobic one. All three of these variants are found in subfamily IA. Individual models were made based on seeds exhibiting only o
Probab=41.25 E-value=39 Score=33.48 Aligned_cols=33 Identities=6% Similarity=-0.009 Sum_probs=24.1
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCc
Q 002029 489 KLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSL 528 (978)
Q Consensus 489 ~lr~~v~~~I~~L~~aGIkv~mlTGD~~~tA~~ia~~~gl 528 (978)
++.||+.++++ ++.++|.-.......+.+..|+
T Consensus 90 ~~~~g~~~~L~-------~~~i~Tn~~~~~~~~~l~~~~l 122 (175)
T TIGR01493 90 PPWPDSAAALA-------RVAILSNASHWAFDQFAQQAGL 122 (175)
T ss_pred CCCCchHHHHH-------HHhhhhCCCHHHHHHHHHHCCC
Confidence 57899999998 3667777777666666666665
No 195
>COG1011 Predicted hydrolase (HAD superfamily) [General function prediction only]
Probab=41.16 E-value=1.1e+02 Score=31.81 Aligned_cols=40 Identities=20% Similarity=0.070 Sum_probs=33.5
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCcc
Q 002029 489 KLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLL 529 (978)
Q Consensus 489 ~lr~~v~~~I~~L~~aGIkv~mlTGD~~~tA~~ia~~~gl~ 529 (978)
++-+++.++++.++.. .+++++|--....+.....++||.
T Consensus 99 ~~~~~~~~~L~~l~~~-~~l~ilTNg~~~~~~~~l~~~gl~ 138 (229)
T COG1011 99 PDYPEALEALKELGKK-YKLGILTNGARPHQERKLRQLGLL 138 (229)
T ss_pred ccChhHHHHHHHHHhh-ccEEEEeCCChHHHHHHHHHcCCh
Confidence 5667888888888888 889999998888888888888853
No 196
>COG3700 AphA Acid phosphatase (class B) [General function prediction only]
Probab=39.94 E-value=86 Score=31.06 Aligned_cols=39 Identities=13% Similarity=0.175 Sum_probs=28.5
Q ss_pred cCCChHHHHHHHHHcCCeEEEEcCCChh----hHHHHHHHcCc
Q 002029 490 LQNGVPECIDKLAQAGIKLWVLTGDKME----TAINIGFACSL 528 (978)
Q Consensus 490 lr~~v~~~I~~L~~aGIkv~mlTGD~~~----tA~~ia~~~gl 528 (978)
+++=+++.|..=++.|=+|..+||+..- ++...|+.-.|
T Consensus 115 PKevA~qLI~MHq~RGD~i~FvTGRt~gk~d~vsk~Lak~F~i 157 (237)
T COG3700 115 PKEVARQLIDMHQRRGDAIYFVTGRTPGKTDTVSKTLAKNFHI 157 (237)
T ss_pred hHHHHHHHHHHHHhcCCeEEEEecCCCCcccccchhHHhhccc
Confidence 4556688899999999999999999864 33444444444
No 197
>TIGR01501 MthylAspMutase methylaspartate mutase, S subunit. This model represents the S (sigma) subunit of methylaspartate mutase (glutamate mutase), a cobalamin-dependent enzyme that catalyzes the first step in a pathway of glutamate fermentation.
Probab=39.64 E-value=81 Score=30.10 Aligned_cols=80 Identities=14% Similarity=0.141 Sum_probs=55.4
Q ss_pred HHHHccceeEeeEEEeCCHHHHHHHHHHHHHHhhcccccHHHHHHHHHHHhhcccEEEEEEeeccccCCChHHHHHHHHH
Q 002029 424 EYADAGLRTLILAYRELDEKEYKQFNEEFTEAKNSVSADREELAEEIAEKIEKNLILLGATAVEDKLQNGVPECIDKLAQ 503 (978)
Q Consensus 424 ~~a~~Glr~l~~A~r~l~~~e~~~~~~~~~~a~~~l~~~r~~~~~~~~~~ie~dl~llG~i~ieD~lr~~v~~~I~~L~~ 503 (978)
-+...|++|+.++...- .+++- + .-.|.+-..+|+.++-=.--+..+++++.|++
T Consensus 24 ~l~~~GfeVi~LG~~v~-~e~~v---------------------~---aa~~~~adiVglS~l~~~~~~~~~~~~~~l~~ 78 (134)
T TIGR01501 24 AFTNAGFNVVNLGVLSP-QEEFI---------------------K---AAIETKADAILVSSLYGHGEIDCKGLRQKCDE 78 (134)
T ss_pred HHHHCCCEEEECCCCCC-HHHHH---------------------H---HHHHcCCCEEEEecccccCHHHHHHHHHHHHH
Confidence 45789999999986543 32221 1 22346788999988887777789999999999
Q ss_pred cCC--eEEEEcCCC------hhhHHHHHHHcCc
Q 002029 504 AGI--KLWVLTGDK------METAINIGFACSL 528 (978)
Q Consensus 504 aGI--kv~mlTGD~------~~tA~~ia~~~gl 528 (978)
+|+ .+|++-|-. ...-..-++++|+
T Consensus 79 ~gl~~~~vivGG~~vi~~~d~~~~~~~l~~~Gv 111 (134)
T TIGR01501 79 AGLEGILLYVGGNLVVGKQDFPDVEKRFKEMGF 111 (134)
T ss_pred CCCCCCEEEecCCcCcChhhhHHHHHHHHHcCC
Confidence 997 567777742 1122445788885
No 198
>PF13380 CoA_binding_2: CoA binding domain; PDB: 3FF4_A 2D5A_A 2D59_A 2E6U_X 1IUL_A 1IUK_A 1Y81_A 2DUW_A.
Probab=39.63 E-value=43 Score=31.06 Aligned_cols=39 Identities=26% Similarity=0.514 Sum_probs=30.1
Q ss_pred cCCChHHHHHHHHHcCC-eEEEEcCCChhhHHHHHHHcCc
Q 002029 490 LQNGVPECIDKLAQAGI-KLWVLTGDKMETAINIGFACSL 528 (978)
Q Consensus 490 lr~~v~~~I~~L~~aGI-kv~mlTGD~~~tA~~ia~~~gl 528 (978)
..+.+++.++++.+.|+ .+|+.+|...+.+...|++.|+
T Consensus 64 ~~~~~~~~v~~~~~~g~~~v~~~~g~~~~~~~~~a~~~gi 103 (116)
T PF13380_consen 64 PPDKVPEIVDEAAALGVKAVWLQPGAESEELIEAAREAGI 103 (116)
T ss_dssp -HHHHHHHHHHHHHHT-SEEEE-TTS--HHHHHHHHHTT-
T ss_pred CHHHHHHHHHHHHHcCCCEEEEEcchHHHHHHHHHHHcCC
Confidence 44578999999999999 6899999999999999999886
No 199
>PF05297 Herpes_LMP1: Herpesvirus latent membrane protein 1 (LMP1); InterPro: IPR007961 This family consists of several latent membrane protein 1 or LMP1s mostly from Epstein-Barr virus (strain GD1) (HHV-4) (Human herpesvirus 4). LMP1 of HHV-4 is a 62-65 kDa plasma membrane protein possessing six membrane spanning regions, a short cytoplasmic N terminus and a long cytoplasmic carboxy tail of 200 amino acids. HHV-4 virus latent membrane protein 1 (LMP1) is essential for HHV-4 mediated transformation and has been associated with several cases of malignancies. HHV-4-like viruses in Macaca fascicularis (Cynomolgus monkeys) have been associated with high lymphoma rates in immunosuppressed monkeys [].; GO: 0019087 transformation of host cell by virus, 0016021 integral to membrane; PDB: 1CZY_E 1ZMS_B.
Probab=39.21 E-value=10 Score=39.97 Aligned_cols=14 Identities=21% Similarity=0.750 Sum_probs=0.0
Q ss_pred CChHHHHHHHHHHH
Q 002029 892 PAPSFWLITLLVLM 905 (978)
Q Consensus 892 ~s~~~wl~il~~~~ 905 (978)
+.-.+|+.+++.+.
T Consensus 167 L~dL~WL~LFlaiL 180 (381)
T PF05297_consen 167 LVDLYWLLLFLAIL 180 (381)
T ss_dssp --------------
T ss_pred HHHHHHHHHHHHHH
Confidence 34567876655433
No 200
>PF05822 UMPH-1: Pyrimidine 5'-nucleotidase (UMPH-1); InterPro: IPR006434 This family is a small group of metazoan sequences with sequences from Arabidopsis thaliana (Mouse-ear cress) and rice. The sequences represent pyrimidine 5-nucleotidases, apparently in reference to HSPC233, the Homo sapiens (Human) homologue []. The structure of mouse sequence has been reported []. This group of sequences was originally found during searches for members of the haloacid dehalogenase (HAD) superfamily (IPR005834 from INTERPRO). All of the conserved catalytic motifs [] are found. The placement of the variable domain between motifs 1 and 2 indicates membership in subfamily I of the superfamily, but these sequences are sufficiently different from any of the branches of that subfamily (IA-ID) as to constitute a separate branch to now be called IE. Considering that the closest identifiable hit outside of the noise range is to a phosphoserine phosphatase, this group may be considered to be most closely allied to subfamily IB.; GO: 0000287 magnesium ion binding, 0008253 5'-nucleotidase activity, 0005737 cytoplasm; PDB: 2BDU_B 2G07_A 2G06_A 2G0A_A 2Q4T_A 2G09_A 2G08_A 2VKQ_A 2CN1_A 2JGA_A.
Probab=36.93 E-value=1.6e+02 Score=31.25 Aligned_cols=50 Identities=20% Similarity=0.286 Sum_probs=36.6
Q ss_pred cccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCccccCceEEE
Q 002029 488 DKLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQGMRQVI 537 (978)
Q Consensus 488 D~lr~~v~~~I~~L~~aGIkv~mlTGD~~~tA~~ia~~~gl~~~~~~~i~ 537 (978)
-.+|+|+.+.++.|++.+|.+.+.|+-=-.....+-++-|...++..++.
T Consensus 89 i~LRdg~~~~f~~L~~~~IP~lIFSAGlgdvI~~vL~q~~~~~~Nv~VvS 138 (246)
T PF05822_consen 89 IMLRDGVEEFFDKLEEHNIPLLIFSAGLGDVIEEVLRQAGVFHPNVKVVS 138 (246)
T ss_dssp --B-BTHHHHHHHHHCTT--EEEEEEEEHHHHHHHHHHTT--BTTEEEEE
T ss_pred hhhhcCHHHHHHHHHhcCCCEEEEeCCcHHHHHHHHHHcCCCCCCeEEEe
Confidence 35899999999999999999999998777777777777788887766553
No 201
>PF13253 DUF4044: Protein of unknown function (DUF4044)
Probab=35.84 E-value=1.3e+02 Score=21.49 Aligned_cols=20 Identities=15% Similarity=0.383 Sum_probs=13.0
Q ss_pred CCCCcCHHHHHHHHHHHHHH
Q 002029 77 PPSKRSKVERRMDKIIYFLF 96 (978)
Q Consensus 77 ~~~k~s~l~~~~n~~~~~~~ 96 (978)
.+.|+|.+|+...-++..+.
T Consensus 2 ~kkkKS~fekiT~v~v~lM~ 21 (35)
T PF13253_consen 2 KKKKKSTFEKITMVVVWLML 21 (35)
T ss_pred CCccccHHHHHHHHHHHHHH
Confidence 35778988887665544443
No 202
>TIGR02250 FCP1_euk FCP1-like phosphatase, phosphatase domain. This domain is related to domains found in the human NLI interacting factor-like phosphatases, and together both are detected by the Pfam model pfam03031.
Probab=34.99 E-value=58 Score=32.02 Aligned_cols=44 Identities=16% Similarity=-0.012 Sum_probs=38.2
Q ss_pred eeccccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCcc
Q 002029 485 AVEDKLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLL 529 (978)
Q Consensus 485 ~ieD~lr~~v~~~I~~L~~aGIkv~mlTGD~~~tA~~ia~~~gl~ 529 (978)
...=++|||+.+.++.|++. +++.+.|.-..+.|..+.+.++.-
T Consensus 54 ~~~v~~rPgv~efL~~l~~~-yel~I~T~~~~~yA~~vl~~ldp~ 97 (156)
T TIGR02250 54 WYLTKLRPFLHEFLKEASKL-YEMHVYTMGTRAYAQAIAKLIDPD 97 (156)
T ss_pred EEEEEECCCHHHHHHHHHhh-cEEEEEeCCcHHHHHHHHHHhCcC
Confidence 34446899999999999955 999999999999999999988764
No 203
>smart00831 Cation_ATPase_N Cation transporter/ATPase, N-terminus. This entry represents the conserved N-terminal region found in several classes of cation-transporting P-type ATPases, including those that transport H+, Na+, Ca2+, Na+/K+, and H+/K+. In the H+/K+- and Na+/K+-exchange P-ATPases, this domain is found in the catalytic alpha chain. In gastric H+/K+-ATPases, this domain undergoes reversible sequential phosphorylation inducing conformational changes that may be important for regulating the function of these ATPases PUBMED:12480547, PUBMED:12529322.
Probab=34.34 E-value=1.1e+02 Score=24.53 Aligned_cols=39 Identities=26% Similarity=0.298 Sum_probs=29.1
Q ss_pred hccccCCCCCCcCHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 002029 70 VFQNSTGPPSKRSKVERRMDKIIYFLFGILVLMSFIGSI 108 (978)
Q Consensus 70 i~~~~~~~~~k~s~l~~~~n~~~~~~~~~~~~~~~i~~i 108 (978)
.+.|.-..+.+.+.+.+.++.+...+.+++++.++++++
T Consensus 23 ~G~N~l~~~~~~s~~~~~l~~~~~p~~~iL~~~a~is~~ 61 (64)
T smart00831 23 YGPNELPPPKKRSPLLRFLRQFHNPLIYILLAAAVLSAL 61 (64)
T ss_pred hCCCCCCCCCCCCHHHHHHHHHHhHHHHHHHHHHHHHHH
Confidence 366766666778999999999888877777776766643
No 204
>KOG4050 consensus Glutamate transporter EAAC1-interacting protein GTRAP3-18 [Amino acid transport and metabolism; Signal transduction mechanisms]
Probab=34.02 E-value=2.3e+02 Score=27.58 Aligned_cols=43 Identities=21% Similarity=0.238 Sum_probs=21.7
Q ss_pred cceehhchhhhHHHHHHhhhhhhhHhhHhHHHHHHHHHHHHHH
Q 002029 676 SDIAIAQFRFLERLLLVHGHWCYRRISSMICYFFYKNIAFGFT 718 (978)
Q Consensus 676 sD~vi~~f~~l~~lll~~gR~~~~~i~~~i~~~~~~n~~~~~~ 718 (978)
-||++...++-..-.-...||.-+-++..+.|.--+-++++..
T Consensus 23 ddF~lgS~Rfa~Pd~~D~~kW~nRVisNLLYyQTNYfv~~it~ 65 (188)
T KOG4050|consen 23 DDFLLGSDRFARPDFNDFKKWNNRVISNLLYYQTNYFVTFITL 65 (188)
T ss_pred HHhccCcccccCCCCccHHHHHHHHHHHHHHHHHhHHHHHHHH
Confidence 3555554444211112345666666777777765554444433
No 205
>TIGR02230 ATPase_gene1 F0F1-ATPase subunit, putative. This model represents a protein found encoded in F1F0-ATPase operons in several genomes, including Methanosarcina barkeri (archaeal) and Chlorobium tepidum (bacterial). It is a small protein (about 100 amino acids) with long hydrophic stretches and is presumed to be a subunit of the enzyme.
Probab=33.97 E-value=1.6e+02 Score=26.48 Aligned_cols=62 Identities=15% Similarity=0.234 Sum_probs=34.5
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHhccCccccchhHHHHHHHhcCChHHHHHHHHHHHHHHHHHHHHHHHHH
Q 002029 850 TYIQHLFIWGGITFWYIFLLAYGAMDPYISTTAYKVFIEACAPAPSFWLITLLVLMSSLLPYFTYSAIQM 919 (978)
Q Consensus 850 ~~~~~~~i~~si~~~~i~~~i~~~i~~~~~~~~~~~~~~~~~~s~~~wl~il~~~~~~ll~~~~~k~~~r 919 (978)
+.+....+++++...++.-++...+-. ..+...+.+...|.++++++.++....-+++++.|
T Consensus 37 ~~~~~l~~~g~IG~~~v~pil~G~~lG--------~WLD~~~~t~~~~tl~~lllGv~~G~~n~w~wi~r 98 (100)
T TIGR02230 37 SIWEGLGMFGLIGWSVAIPTLLGVAVG--------IWLDRHYPSPFSWTLTMLIVGVVIGCLNAWHWVSR 98 (100)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHH--------HHHHhhcCCCcHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 344555555555555554443333221 13334445555777777777777777777777654
No 206
>PF02261 Asp_decarbox: Aspartate decarboxylase; InterPro: IPR003190 Decarboxylation of aspartate is the major route of alanine production in bacteria, and is catalysed by the enzyme aspartate decarboxylase. The enzyme is translated as an inactive proenzyme of two chains, A and B. This family contains both chains of aspartate decarboxylase.; GO: 0004068 aspartate 1-decarboxylase activity, 0006523 alanine biosynthetic process; PDB: 1PYU_C 1AW8_A 1PYQ_B 3TM7_C 1PT1_A 1PQH_A 1PPY_B 1PT0_B 1PQF_A 1PQE_A ....
Probab=33.47 E-value=50 Score=30.30 Aligned_cols=83 Identities=22% Similarity=0.386 Sum_probs=49.7
Q ss_pred EEEecCCccHHHHHHHHHHcCCEEEeecCceeEEEecCCCCCccceeEeeEeEeecCCCCCceEEEEEEeCCCeEEEEEe
Q 002029 318 ISYEAESPDEAAFVIAARELGFEFYERTQTSISVHELDPVTGTKVERSYSLLNVLEFSSSRKRMSVIVRSEEGTLLLLSK 397 (978)
Q Consensus 318 ~~y~~~sp~E~Alv~~a~~~g~~~~~r~~~~~~i~~~~~~~~~~~~~~~~il~~~~F~s~rkrmsviv~~~~~~~~l~~K 397 (978)
+.|.|+=..+..|+++|.- ..|+.+.+..-++.-+..+.++..+.|.-.+..-
T Consensus 20 L~Y~GSitID~~Ll~aagi---------------------------~p~E~V~V~Nv~nG~Rf~TYvI~g~~GSg~I~lN 72 (116)
T PF02261_consen 20 LNYEGSITIDEDLLDAAGI---------------------------LPYEQVQVVNVNNGERFETYVIPGERGSGVICLN 72 (116)
T ss_dssp TTSTSCEEEEHHHHHHCT-----------------------------TTBEEEEEETTT--EEEEEEEEESTTTT-EEEE
T ss_pred cccceeeEECHHHHHHcCC---------------------------CcCCEEEEEECCCCcEEEEEEEEccCCCcEEEEC
Confidence 3455555677888877643 3344455555555556666677766554455666
Q ss_pred CCchHHHHHhcccchhhHHHHHHHHHHHHHccceeEeeEEEeCCHHHHHHHH
Q 002029 398 GADSVMFERLAENGREFEEQTKEHINEYADAGLRTLILAYRELDEKEYKQFN 449 (978)
Q Consensus 398 Ga~~~i~~~~~~~~~~~~~~~~~~l~~~a~~Glr~l~~A~r~l~~~e~~~~~ 449 (978)
||... +.+.|=|++..||..++++|...|.
T Consensus 73 GaAAr----------------------l~~~GD~vII~sy~~~~~~e~~~~~ 102 (116)
T PF02261_consen 73 GAAAR----------------------LVQVGDRVIIMSYAQVDEEEAKNHK 102 (116)
T ss_dssp GGGGG----------------------CS-TT-EEEEEEEEEEEHHHHHH--
T ss_pred CHHHh----------------------ccCCCCEEEEEEcccCCHHHHhhCC
Confidence 87532 2456779999999999999887663
No 207
>TIGR01662 HAD-SF-IIIA HAD-superfamily hydrolase, subfamily IIIA. In the case of histidinol phosphatase and PNK-3'-phosphatase, this model represents a domain of a bifunctional system. In the histidinol phosphatase HisB, a C-terminal domain is an imidazoleglycerol-phosphate dehydratase which catalyzes a related step in histidine biosynthesis. In PNK-3'-phosphatase, N- and C-terminal domains constitute the polynucleotide kinase and DNA-binding components of the enzyme.
Probab=33.33 E-value=3.4e+02 Score=25.23 Aligned_cols=96 Identities=15% Similarity=0.097 Sum_probs=49.1
Q ss_pred HHHHHHHHHHHHccceeEeeEEEeCCHHHHHHHHHHHHHHhhcccccHHHHHHHHHHHhhcccEEEEEEeeccccCCChH
Q 002029 416 EQTKEHINEYADAGLRTLILAYRELDEKEYKQFNEEFTEAKNSVSADREELAEEIAEKIEKNLILLGATAVEDKLQNGVP 495 (978)
Q Consensus 416 ~~~~~~l~~~a~~Glr~l~~A~r~l~~~e~~~~~~~~~~a~~~l~~~r~~~~~~~~~~ie~dl~llG~i~ieD~lr~~v~ 495 (978)
....+.++.+..+|+++.+++-+........ | .+.++...+.+.-...+.-..+ ...+|...
T Consensus 28 ~~v~~~l~~L~~~g~~l~i~Sn~~~~~~~~~-~---------------~~~~~~~l~~~~l~~~~~~~~~--~~~KP~~~ 89 (132)
T TIGR01662 28 PEVPDALAELKEAGYKVVIVTNQSGIGRGKF-S---------------SGRVARRLEELGVPIDVLYACP--HCRKPKPG 89 (132)
T ss_pred CCHHHHHHHHHHCCCEEEEEECCccccccHH-H---------------HHHHHHHHHHCCCCEEEEEECC--CCCCCChH
Confidence 3456678888899999888885432211000 0 1111112222211111221222 23344333
Q ss_pred HHHHHHHHc-CCeE--EEEcCCChhhHHHHHHHcCcc
Q 002029 496 ECIDKLAQA-GIKL--WVLTGDKMETAINIGFACSLL 529 (978)
Q Consensus 496 ~~I~~L~~a-GIkv--~mlTGD~~~tA~~ia~~~gl~ 529 (978)
-....+++. ++.. .+.=||....-+..|+++|+.
T Consensus 90 ~~~~~~~~~~~~~~~~~v~IGD~~~~Di~~A~~~Gi~ 126 (132)
T TIGR01662 90 MFLEALKRFNEIDPEESVYVGDQDLTDLQAAKRAGLA 126 (132)
T ss_pred HHHHHHHHcCCCChhheEEEcCCCcccHHHHHHCCCe
Confidence 333444555 4633 666799777888899999984
No 208
>TIGR00223 panD L-aspartate-alpha-decarboxylase. Members of this family are aspartate 1-decarboxylase, the enzyme that makes beta-alanine and C02 from aspartate. Beta-alanine is then used to make the vitamin pantothenate, from which coenzyme A is made. Aspartate 1-decarboxylase is synthesized as a proenzyme, then cleaved to an alpha (C-terminal) and beta (N-terminal) subunit with a pyruvoyl group.
Probab=32.91 E-value=66 Score=29.95 Aligned_cols=84 Identities=13% Similarity=0.278 Sum_probs=54.3
Q ss_pred CcEEEecCCccHHHHHHHHHHcCCEEEeecCceeEEEecCCCCCccceeEeeEeEeecCCCCCceEEEEEEeCCCeEEEE
Q 002029 316 GKISYEAESPDEAAFVIAARELGFEFYERTQTSISVHELDPVTGTKVERSYSLLNVLEFSSSRKRMSVIVRSEEGTLLLL 395 (978)
Q Consensus 316 ~~~~y~~~sp~E~Alv~~a~~~g~~~~~r~~~~~~i~~~~~~~~~~~~~~~~il~~~~F~s~rkrmsviv~~~~~~~~l~ 395 (978)
..+.|.++=..+..|+++|.- ..|+.+.+..-+...+.-+.++..+.|.-.+.
T Consensus 18 a~L~Y~GSItID~~Lm~aagi---------------------------~p~E~V~V~Nv~NG~Rf~TYvI~G~~GSg~I~ 70 (126)
T TIGR00223 18 ANLNYEGSITIDEDLLDAAGI---------------------------LENEKVDIVNVNNGKRFSTYAIAGKRGSRIIC 70 (126)
T ss_pred cccccceeEEECHHHHHhcCC---------------------------CCCCEEEEEECCCCcEEEEEEEEcCCCCCEEE
Confidence 357788877788899887643 23344444444444444555666555554555
Q ss_pred EeCCchHHHHHhcccchhhHHHHHHHHHHHHHccceeEeeEEEeCCHHHHHHH
Q 002029 396 SKGADSVMFERLAENGREFEEQTKEHINEYADAGLRTLILAYRELDEKEYKQF 448 (978)
Q Consensus 396 ~KGa~~~i~~~~~~~~~~~~~~~~~~l~~~a~~Glr~l~~A~r~l~~~e~~~~ 448 (978)
.-||.- .+.+.|-|++..||-.++++|...|
T Consensus 71 lNGAAA----------------------rl~~~GD~VII~sy~~~~~~e~~~~ 101 (126)
T TIGR00223 71 VNGAAA----------------------RCVSVGDIVIIASYVTMPDEEARTH 101 (126)
T ss_pred eCCHHH----------------------hcCCCCCEEEEEECCcCCHHHHhcC
Confidence 667642 2356688999999999999886554
No 209
>PRK05449 aspartate alpha-decarboxylase; Provisional
Probab=32.73 E-value=70 Score=29.87 Aligned_cols=84 Identities=19% Similarity=0.312 Sum_probs=55.0
Q ss_pred CcEEEecCCccHHHHHHHHHHcCCEEEeecCceeEEEecCCCCCccceeEeeEeEeecCCCCCceEEEEEEeCCCeEEEE
Q 002029 316 GKISYEAESPDEAAFVIAARELGFEFYERTQTSISVHELDPVTGTKVERSYSLLNVLEFSSSRKRMSVIVRSEEGTLLLL 395 (978)
Q Consensus 316 ~~~~y~~~sp~E~Alv~~a~~~g~~~~~r~~~~~~i~~~~~~~~~~~~~~~~il~~~~F~s~rkrmsviv~~~~~~~~l~ 395 (978)
..+.|.++=..+..|+++|.- ..|+.+.+..-+...+..+.++..+.|.-.+.
T Consensus 18 a~L~Y~GSitID~~Ll~aagi---------------------------~p~E~V~V~Nv~NG~Rf~TYvI~g~~GSg~I~ 70 (126)
T PRK05449 18 ADLNYEGSITIDEDLLDAAGI---------------------------LENEKVQIVNVNNGARFETYVIAGERGSGVIC 70 (126)
T ss_pred cccccceeEEECHHHHHhcCC---------------------------CCCCEEEEEECCCCcEEEEEEEEcCCCCCEEE
Confidence 357788877788899887643 23444444444444445555666555555566
Q ss_pred EeCCchHHHHHhcccchhhHHHHHHHHHHHHHccceeEeeEEEeCCHHHHHHH
Q 002029 396 SKGADSVMFERLAENGREFEEQTKEHINEYADAGLRTLILAYRELDEKEYKQF 448 (978)
Q Consensus 396 ~KGa~~~i~~~~~~~~~~~~~~~~~~l~~~a~~Glr~l~~A~r~l~~~e~~~~ 448 (978)
.-||.. .+.+.|=|++..||-.++++|...|
T Consensus 71 lNGAAA----------------------r~~~~GD~vII~ay~~~~~~e~~~~ 101 (126)
T PRK05449 71 LNGAAA----------------------RLVQVGDLVIIAAYAQMDEEEAKTH 101 (126)
T ss_pred eCCHHH----------------------hcCCCCCEEEEEECccCCHHHHhcC
Confidence 667642 2355688999999999999886554
No 210
>PF12710 HAD: haloacid dehalogenase-like hydrolase; PDB: 3P96_A 3N28_A 3FVV_A 1RKU_A 1RKV_A 1Y8A_A 2FEA_B 3KD3_B.
Probab=32.65 E-value=23 Score=35.64 Aligned_cols=31 Identities=32% Similarity=0.439 Sum_probs=25.6
Q ss_pred hHHHHHHHH-----HccCCCeEEEEcCCcCCHHHhh
Q 002029 626 QKALVTRLV-----KTKTSSTTLAIGDGANDVGMLQ 656 (978)
Q Consensus 626 qK~~iV~~l-----k~~~~~~v~aiGDG~ND~~ml~ 656 (978)
.|...++.+ +......++++|||.||.+|||
T Consensus 157 ~K~~~l~~~~~~~~~~~~~~~~~~iGDs~~D~~~lr 192 (192)
T PF12710_consen 157 GKAEALKELYIRDEEDIDPDRVIAIGDSINDLPMLR 192 (192)
T ss_dssp HHHHHHHHHHHHHHHTHTCCEEEEEESSGGGHHHHH
T ss_pred cHHHHHHHHHHHhhcCCCCCeEEEEECCHHHHHHhC
Confidence 389888888 1125789999999999999997
No 211
>PLN03064 alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional
Probab=32.61 E-value=8.7e+02 Score=31.36 Aligned_cols=43 Identities=14% Similarity=0.015 Sum_probs=32.5
Q ss_pred CChHHHHHHHHHc-CCeEEEEcCCChhhHHHHHHHcC--ccccCce
Q 002029 492 NGVPECIDKLAQA-GIKLWVLTGDKMETAINIGFACS--LLRQGMR 534 (978)
Q Consensus 492 ~~v~~~I~~L~~a-GIkv~mlTGD~~~tA~~ia~~~g--l~~~~~~ 534 (978)
+++.++++.|.+. +..|+++||+..++.......++ ++..++.
T Consensus 625 p~l~~~L~~L~~dp~n~VaIVSGR~~~~Le~~fg~~~L~LaAEHG~ 670 (934)
T PLN03064 625 PELKEPLRALCSDPKTTIVVLSGSDRSVLDENFGEFDMWLAAENGM 670 (934)
T ss_pred HHHHHHHHHHHhCCCCeEEEEeCCCHHHHHHHhCCCCceEEeeCCe
Confidence 5677888888775 67999999999999888776544 4444443
No 212
>PF12689 Acid_PPase: Acid Phosphatase; InterPro: IPR010036 This entry represents two closely related clades of sequences from eukaryotes and archaea. The mouse enzyme has been characterised as a phosphatase and has been positively identified as a member of the haloacid dehalogenase (HAD) superfamily by site-directed mutagenesis of the active site residues [, ].; GO: 0016791 phosphatase activity; PDB: 1U7P_A 1U7O_A 2WM8_A.
Probab=30.94 E-value=78 Score=31.56 Aligned_cols=41 Identities=27% Similarity=0.291 Sum_probs=31.5
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEc-CCChhhHHHHHHHcCcc
Q 002029 489 KLQNGVPECIDKLAQAGIKLWVLT-GDKMETAINIGFACSLL 529 (978)
Q Consensus 489 ~lr~~v~~~I~~L~~aGIkv~mlT-GD~~~tA~~ia~~~gl~ 529 (978)
.+-++|++.++.|++.|+++.++| -+.++.|..+-+.+++.
T Consensus 45 ~lypdv~~iL~~L~~~gv~lavASRt~~P~~A~~~L~~l~i~ 86 (169)
T PF12689_consen 45 SLYPDVPEILQELKERGVKLAVASRTDEPDWARELLKLLEID 86 (169)
T ss_dssp ---TTHHHHHHHHHHCT--EEEEE--S-HHHHHHHHHHTT-C
T ss_pred EeCcCHHHHHHHHHHCCCEEEEEECCCChHHHHHHHHhcCCC
Confidence 478999999999999999999999 58899999999998886
No 213
>COG0474 MgtA Cation transport ATPase [Inorganic ion transport and metabolism]
Probab=30.63 E-value=6.9e+02 Score=32.33 Aligned_cols=42 Identities=19% Similarity=0.239 Sum_probs=34.7
Q ss_pred hcCChHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCHHHHHHHH
Q 002029 890 CAPAPSFWLITLLVLMSSLLPYFTYSAIQMRFFPLHHQMIQWF 932 (978)
Q Consensus 890 ~~~s~~~wl~il~~~~~~ll~~~~~k~~~r~~~p~~~~~~re~ 932 (978)
...++.+|+.++++.++++++.++....++.|.|.+.. .++.
T Consensus 850 ~~~n~~~~~~~~~~~~l~l~~~~~~~~~~~~f~~~~~~-~~~~ 891 (917)
T COG0474 850 LFSNKYLWLALLVIIILQLLIIFLPPLNLKIFQPTPLS-LFEW 891 (917)
T ss_pred cccCHHHHHHHHHHHHHHHHHHHhHHhHhhhccCCCCc-HHHH
Confidence 45789999999999999999999888887888888777 5554
No 214
>PRK10444 UMP phosphatase; Provisional
Probab=30.07 E-value=2.7e+02 Score=29.60 Aligned_cols=47 Identities=19% Similarity=0.229 Sum_probs=30.1
Q ss_pred CCCeEEEEcCCc-CCHHHhhhccccc-cc-cCCccchh----ccccceehhchh
Q 002029 638 TSSTTLAIGDGA-NDVGMLQEADIGV-GI-SGVEGMQA----VMSSDIAIAQFR 684 (978)
Q Consensus 638 ~~~~v~aiGDG~-ND~~ml~~AdvGI-~i-~g~e~~~a----~~asD~vi~~f~ 684 (978)
..+.++||||.. +|..+=+.|++-- .+ +|....+. ....|+++.+..
T Consensus 190 ~~~~~v~IGD~~~tDi~~A~~~G~~~vlV~~G~~~~~~l~~~~~~pd~~~~sl~ 243 (248)
T PRK10444 190 HSEETVIVGDNLRTDILAGFQAGLETILVLSGVSTLDDIDSMPFRPSWIYPSVA 243 (248)
T ss_pred CcccEEEECCCcHHHHHHHHHcCCCEEEECCCCCCHHHHhcCCCCCCEEECCHH
Confidence 457899999997 8999999988864 33 33322111 124577766543
No 215
>PF13242 Hydrolase_like: HAD-hyrolase-like; PDB: 2P27_A 2OYC_A 2CFT_A 2P69_A 2CFS_A 2CFR_A 2HX1_D 2X4D_A 3HLT_C 3L1U_B ....
Probab=30.03 E-value=44 Score=27.99 Aligned_cols=47 Identities=21% Similarity=0.357 Sum_probs=32.0
Q ss_pred CCCeEEEEcCC-cCCHHHhhhccccc-cc-cCCccc-h---hccccceehhchh
Q 002029 638 TSSTTLAIGDG-ANDVGMLQEADIGV-GI-SGVEGM-Q---AVMSSDIAIAQFR 684 (978)
Q Consensus 638 ~~~~v~aiGDG-~ND~~ml~~AdvGI-~i-~g~e~~-~---a~~asD~vi~~f~ 684 (978)
....++||||. ..|+.+=+++++-- .+ +|.... + ....+|+++.++.
T Consensus 20 ~~~~~~~VGD~~~~Di~~a~~~G~~~ilV~tG~~~~~~~~~~~~~pd~vv~~l~ 73 (75)
T PF13242_consen 20 DPSRCVMVGDSLETDIEAAKAAGIDTILVLTGVYSPEDLEKAEHKPDYVVDDLK 73 (75)
T ss_dssp GGGGEEEEESSTTTHHHHHHHTTSEEEEESSSSSCCCGHHHSSSTTSEEESSGG
T ss_pred CHHHEEEEcCCcHhHHHHHHHcCCcEEEECCCCCCHHHHhccCCCCCEEECCHH
Confidence 34689999999 99999999998754 33 232221 1 1247888887754
No 216
>cd06919 Asp_decarbox Aspartate alpha-decarboxylase or L-aspartate 1-decarboxylase, a pyruvoyl group-dependent decarboxylase in beta-alanine production. Decarboxylation of aspartate is the major route of beta-alanine production in bacteria, and is catalyzed by the enzyme L-aspartate decarboxylase (ADC), EC:4.1.1.11 which requires a pyruvoyl group for its activity. The pyruvoyl cofactor is covalently bound to the enzyme. The protein is synthesized as a proenzyme and cleaved via self-processing at Gly23-Ser24 to yield an alpha chain (C-terminal fragment) and beta chain (N-terminal fragment), and the pyruvoyl group. Beta-alanine is required for the biosynthesis of pantothenate, in which the enzyme plays a critical regulatory role. The active site of the tetrameric enzyme is located at the interface of two subunits, with a Lysine and a Histidine from the beta chain of one subunit forming the active site with residues from the alpha chain of the adjacent subunit. This alignment
Probab=29.95 E-value=84 Score=28.63 Aligned_cols=84 Identities=21% Similarity=0.355 Sum_probs=54.2
Q ss_pred CcEEEecCCccHHHHHHHHHHcCCEEEeecCceeEEEecCCCCCccceeEeeEeEeecCCCCCceEEEEEEeCCCeEEEE
Q 002029 316 GKISYEAESPDEAAFVIAARELGFEFYERTQTSISVHELDPVTGTKVERSYSLLNVLEFSSSRKRMSVIVRSEEGTLLLL 395 (978)
Q Consensus 316 ~~~~y~~~sp~E~Alv~~a~~~g~~~~~r~~~~~~i~~~~~~~~~~~~~~~~il~~~~F~s~rkrmsviv~~~~~~~~l~ 395 (978)
..+.|.++=..+..|+++|.- ..|+.+.+..-+...+..+.++..+.|.-.+.
T Consensus 17 a~L~YeGSitID~~Ll~aagi---------------------------~~~E~V~I~Nv~NG~Rf~TYvI~g~~gSg~I~ 69 (111)
T cd06919 17 ADLNYEGSITIDEDLLEAAGI---------------------------LPYEKVLVVNVNNGARFETYVIPGERGSGVIC 69 (111)
T ss_pred cccccceeEEECHHHHHhcCC---------------------------CCCCEEEEEECCCCcEEEEEEEEcCCCCCEEE
Confidence 356788877788889887642 23444444444444445555666555555566
Q ss_pred EeCCchHHHHHhcccchhhHHHHHHHHHHHHHccceeEeeEEEeCCHHHHHHH
Q 002029 396 SKGADSVMFERLAENGREFEEQTKEHINEYADAGLRTLILAYRELDEKEYKQF 448 (978)
Q Consensus 396 ~KGa~~~i~~~~~~~~~~~~~~~~~~l~~~a~~Glr~l~~A~r~l~~~e~~~~ 448 (978)
.-||.. .+.+.|-|++..||-.++++|...|
T Consensus 70 lNGAAA----------------------r~~~~GD~vII~sy~~~~~~e~~~~ 100 (111)
T cd06919 70 LNGAAA----------------------RLGQPGDRVIIMAYALMDEEEAEGH 100 (111)
T ss_pred eCCHHH----------------------hcCCCCCEEEEEECccCCHHHHhcC
Confidence 667642 2355688999999999999876543
No 217
>PLN03140 ABC transporter G family member; Provisional
Probab=29.84 E-value=1.6e+03 Score=30.77 Aligned_cols=18 Identities=33% Similarity=0.466 Sum_probs=13.1
Q ss_pred eEEEeeCCcccccCeeEE
Q 002029 210 DTILSDKTGTLTCNSMEF 227 (978)
Q Consensus 210 ~~I~sDKTGTLT~n~m~~ 227 (978)
..|+-|=+|++-.|+|..
T Consensus 178 ~~IL~~vs~~i~~Ge~~~ 195 (1470)
T PLN03140 178 LTILKDASGIIKPSRMTL 195 (1470)
T ss_pred ceeccCCeEEEeCCeEEE
Confidence 346677778888888775
No 218
>KOG3109 consensus Haloacid dehalogenase-like hydrolase [General function prediction only]
Probab=29.40 E-value=3.4e+02 Score=28.21 Aligned_cols=128 Identities=16% Similarity=0.218 Sum_probs=76.6
Q ss_pred EEEeeccccCCCh--HHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCccccCceEEEEecCCCcccccchhhhHHHHHH
Q 002029 482 GATAVEDKLQNGV--PECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQGMRQVIISSETPESKTLEKSEDKSAAAA 559 (978)
Q Consensus 482 G~i~ieD~lr~~v--~~~I~~L~~aGIkv~mlTGD~~~tA~~ia~~~gl~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~ 559 (978)
|..-++| |+|+- ++.+-.|++.+ -|+.|.-...-|..+-+.+||...-..++.++..++.
T Consensus 92 ~~LPlq~-LkPD~~LRnlLL~l~~r~--k~~FTNa~k~HA~r~Lk~LGieDcFegii~~e~~np~--------------- 153 (244)
T KOG3109|consen 92 GRLPLQD-LKPDPVLRNLLLSLKKRR--KWIFTNAYKVHAIRILKKLGIEDCFEGIICFETLNPI--------------- 153 (244)
T ss_pred ccCcHhh-cCCCHHHHHHHHhCcccc--EEEecCCcHHHHHHHHHHhChHHhccceeEeeccCCC---------------
Confidence 4445666 77764 45555555444 8999999999999999999996544444444333211
Q ss_pred HHHHHHHHHHHhhhhhhccccCCCCCeEEEEcCchhhhhchhhHHHHHHHHHhccCeeEEEeCCchhHHHHHHHHHccCC
Q 002029 560 ALKASVLHQLIRGKELLDSSNESLGPLALIIDGKSLTYALEDDVKDLFLELAIGCASVICCRSSPKQKALVTRLVKTKTS 639 (978)
Q Consensus 560 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~f~~l~~~~~~vi~~r~sP~qK~~iV~~lk~~~~ 639 (978)
+.-++|.-+|+-=....+...-...
T Consensus 154 -------------------------------------------------------~~~~vcKP~~~afE~a~k~agi~~p 178 (244)
T KOG3109|consen 154 -------------------------------------------------------EKTVVCKPSEEAFEKAMKVAGIDSP 178 (244)
T ss_pred -------------------------------------------------------CCceeecCCHHHHHHHHHHhCCCCc
Confidence 0126666666532223332221135
Q ss_pred CeEEEEcCCcCCHHHhhhccccccccCCccchhccccceehhchh
Q 002029 640 STTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDIAIAQFR 684 (978)
Q Consensus 640 ~~v~aiGDG~ND~~ml~~AdvGI~i~g~e~~~a~~asD~vi~~f~ 684 (978)
..|+++-|+.+.+..=++-+..=-+.|.+. -...+|.++.+..
T Consensus 179 ~~t~FfDDS~~NI~~ak~vGl~tvlv~~~~--~~~~~d~~l~~ih 221 (244)
T KOG3109|consen 179 RNTYFFDDSERNIQTAKEVGLKTVLVGREH--KIKGVDYALEQIH 221 (244)
T ss_pred CceEEEcCchhhHHHHHhccceeEEEEeee--cccchHHHHHHhh
Confidence 689999999998876555444433444444 2356777776633
No 219
>TIGR01460 HAD-SF-IIA Haloacid Dehalogenase Superfamily Class (subfamily) IIA. Many of the genes in this subfamily have been annotated as "pNPPase" "4-nitrophenyl phosphatase" or "NPPase". These all refer to the same activity versus a common lab test compound used to determine phosphatase activity. There is no evidence that this activity is physiologically relevant.
Probab=28.85 E-value=86 Score=33.09 Aligned_cols=47 Identities=19% Similarity=0.178 Sum_probs=33.8
Q ss_pred EEEeeccccCCChHHHHHHHHHcCCeEEEEc---CCChhhHHHHHHH-cCc
Q 002029 482 GATAVEDKLQNGVPECIDKLAQAGIKLWVLT---GDKMETAINIGFA-CSL 528 (978)
Q Consensus 482 G~i~ieD~lr~~v~~~I~~L~~aGIkv~mlT---GD~~~tA~~ia~~-~gl 528 (978)
|++--.+.+=+++.++|+.++++|++++++| |.........-.+ .|+
T Consensus 7 GvL~~~~~~~~~a~e~i~~l~~~g~~~~~~tN~~~~~~~~~~~~l~~~~g~ 57 (236)
T TIGR01460 7 GVLWLGHKPIPGAAEALNRLRAKGKPVVFLTNNSSRSEEDYAEKLSSLLGV 57 (236)
T ss_pred CccCcCCccCcCHHHHHHHHHHCCCeEEEEECCCCCCHHHHHHHHHHhcCC
Confidence 4444456677899999999999999999999 5555544443334 454
No 220
>TIGR00640 acid_CoA_mut_C methylmalonyl-CoA mutase C-terminal domain. Methylmalonyl-CoA mutase (EC 5.4.99.2) catalyzes a reversible isomerization between L-methylmalonyl-CoA and succinyl-CoA. The enzyme uses an adenosylcobalamin cofactor. It may be a homodimer, as in mitochondrion, or a heterodimer with partially homologous beta chain that does not bind the adenosylcobalamin cofactor, as in Propionibacterium freudenreichii. The most similar archaeal sequences are separate chains, such as AF2215 and AF2219 of Archaeoglobus fulgidus, that correspond roughly to the first 500 and last 130 residues, respectively of known methylmalonyl-CoA mutases. This model describes the C-terminal domain subfamily. In a neighbor-joining tree (methylaspartate mutase S chain as the outgroup), AF2219 branches with a coenzyme B12-dependent enzyme known not to be 5.4.99.2.
Probab=27.39 E-value=1.9e+02 Score=27.53 Aligned_cols=80 Identities=16% Similarity=0.189 Sum_probs=56.9
Q ss_pred HHHHccceeEeeEEEeCCHHHHHHHHHHHHHHhhcccccHHHHHHHHHHHhhcccEEEEEEeeccccCCChHHHHHHHHH
Q 002029 424 EYADAGLRTLILAYRELDEKEYKQFNEEFTEAKNSVSADREELAEEIAEKIEKNLILLGATAVEDKLQNGVPECIDKLAQ 503 (978)
Q Consensus 424 ~~a~~Glr~l~~A~r~l~~~e~~~~~~~~~~a~~~l~~~r~~~~~~~~~~ie~dl~llG~i~ieD~lr~~v~~~I~~L~~ 503 (978)
.|...|+.|+-.... .+.+++- ..-.|.+-..+|+.++-..--+.+++.++.|++
T Consensus 25 ~l~~~GfeVi~lg~~-~s~e~~v------------------------~aa~e~~adii~iSsl~~~~~~~~~~~~~~L~~ 79 (132)
T TIGR00640 25 AYADLGFDVDVGPLF-QTPEEIA------------------------RQAVEADVHVVGVSSLAGGHLTLVPALRKELDK 79 (132)
T ss_pred HHHhCCcEEEECCCC-CCHHHHH------------------------HHHHHcCCCEEEEcCchhhhHHHHHHHHHHHHh
Confidence 467899999988854 3333332 122357888999999999999999999999999
Q ss_pred cCC-eE-EEEcCCChhhHHHHHHHcCc
Q 002029 504 AGI-KL-WVLTGDKMETAINIGFACSL 528 (978)
Q Consensus 504 aGI-kv-~mlTGD~~~tA~~ia~~~gl 528 (978)
+|. .+ +++-|-.+..-..--+++|+
T Consensus 80 ~g~~~i~vivGG~~~~~~~~~l~~~Gv 106 (132)
T TIGR00640 80 LGRPDILVVVGGVIPPQDFDELKEMGV 106 (132)
T ss_pred cCCCCCEEEEeCCCChHhHHHHHHCCC
Confidence 987 44 44444444433555677887
No 221
>cd02070 corrinoid_protein_B12-BD B12 binding domain of corrinoid proteins. A family of small methanogenic corrinoid proteins that bind methyl-Co(III) 5-hydroxybenzimidazolylcobamide as a cofactor. They play a role on the methanogenesis from trimethylamine, dimethylamine or monomethylamine, which is initiated by a series of corrinoid-dependent methyltransferases.
Probab=27.11 E-value=1.2e+02 Score=31.03 Aligned_cols=79 Identities=22% Similarity=0.319 Sum_probs=55.7
Q ss_pred HHHHccceeEeeEEEeCCHHHHHHHHHHHHHHhhcccccHHHHHHHHHHHhhcccEEEEEEeeccccCCChHHHHHHHHH
Q 002029 424 EYADAGLRTLILAYRELDEKEYKQFNEEFTEAKNSVSADREELAEEIAEKIEKNLILLGATAVEDKLQNGVPECIDKLAQ 503 (978)
Q Consensus 424 ~~a~~Glr~l~~A~r~l~~~e~~~~~~~~~~a~~~l~~~r~~~~~~~~~~ie~dl~llG~i~ieD~lr~~v~~~I~~L~~ 503 (978)
-+...|++|+.++ ..++.+++.+- -.+.+-.++|+...-..--+.+++.|+.|++
T Consensus 105 ~l~~~G~~vi~lG-~~~p~~~l~~~------------------------~~~~~~d~v~lS~~~~~~~~~~~~~i~~lr~ 159 (201)
T cd02070 105 MLEANGFEVIDLG-RDVPPEEFVEA------------------------VKEHKPDILGLSALMTTTMGGMKEVIEALKE 159 (201)
T ss_pred HHHHCCCEEEECC-CCCCHHHHHHH------------------------HHHcCCCEEEEeccccccHHHHHHHHHHHHH
Confidence 4678999998888 45555544321 1236778999999888888999999999999
Q ss_pred cCC--eEEEEcCCChhhHHHHHHHcCc
Q 002029 504 AGI--KLWVLTGDKMETAINIGFACSL 528 (978)
Q Consensus 504 aGI--kv~mlTGD~~~tA~~ia~~~gl 528 (978)
++. ++.++=|-...+. ..+.++|-
T Consensus 160 ~~~~~~~~i~vGG~~~~~-~~~~~~Ga 185 (201)
T cd02070 160 AGLRDKVKVMVGGAPVNQ-EFADEIGA 185 (201)
T ss_pred CCCCcCCeEEEECCcCCH-HHHHHcCC
Confidence 987 6644444444443 47777764
No 222
>TIGR02370 pyl_corrinoid methyltransferase cognate corrinoid proteins, Methanosarcina family. This model describes a subfamily of the B12 binding domain (pfam02607, pfam02310) proteins. Members of the seed alignment include corrinoid proteins specific to four different, mutally non-homologous enzymes of the genus Methanosarcina. Three of the four cognate enzymes (trimethylamine, dimethylamine, and monomethylamine methyltransferases) all have the unusual, ribosomally incorporated amino acid pyrrolysine at the active site. All act in systems in which a methyl group is transferred to the corrinoid protein to create methylcobalamin, from which the methyl group is later transferred elsewhere.
Probab=25.67 E-value=1.4e+02 Score=30.52 Aligned_cols=78 Identities=14% Similarity=0.184 Sum_probs=55.4
Q ss_pred HHHHccceeEeeEEEeCCHHHHHHHHHHHHHHhhcccccHHHHHHHHHHHhhcccEEEEEEeeccccCCChHHHHHHHHH
Q 002029 424 EYADAGLRTLILAYRELDEKEYKQFNEEFTEAKNSVSADREELAEEIAEKIEKNLILLGATAVEDKLQNGVPECIDKLAQ 503 (978)
Q Consensus 424 ~~a~~Glr~l~~A~r~l~~~e~~~~~~~~~~a~~~l~~~r~~~~~~~~~~ie~dl~llG~i~ieD~lr~~v~~~I~~L~~ 503 (978)
-+...|++|+.++. .++.+++.+- -.+.+-.++|+-+.-..--+.+++.|+.|++
T Consensus 107 ~l~~~G~~vi~LG~-~vp~e~~v~~------------------------~~~~~pd~v~lS~~~~~~~~~~~~~i~~l~~ 161 (197)
T TIGR02370 107 MLRANGFDVIDLGR-DVPIDTVVEK------------------------VKKEKPLMLTGSALMTTTMYGQKDINDKLKE 161 (197)
T ss_pred HHHhCCcEEEECCC-CCCHHHHHHH------------------------HHHcCCCEEEEccccccCHHHHHHHHHHHHH
Confidence 45778999999984 3444433221 1236778999999999999999999999999
Q ss_pred cCCe---EEEEcCCChhhHHHHHHHcCc
Q 002029 504 AGIK---LWVLTGDKMETAINIGFACSL 528 (978)
Q Consensus 504 aGIk---v~mlTGD~~~tA~~ia~~~gl 528 (978)
+|.+ .+++-|... +. ..|++.|-
T Consensus 162 ~~~~~~v~i~vGG~~~-~~-~~~~~~ga 187 (197)
T TIGR02370 162 EGYRDSVKFMVGGAPV-TQ-DWADKIGA 187 (197)
T ss_pred cCCCCCCEEEEEChhc-CH-HHHHHhCC
Confidence 9874 456666544 33 46777664
No 223
>PRK08508 biotin synthase; Provisional
Probab=25.49 E-value=4.8e+02 Score=28.27 Aligned_cols=39 Identities=21% Similarity=0.080 Sum_probs=26.9
Q ss_pred hHHHHHHHHHcCCeE-E------------EEcCCChhh---HHHHHHHcCccccC
Q 002029 494 VPECIDKLAQAGIKL-W------------VLTGDKMET---AINIGFACSLLRQG 532 (978)
Q Consensus 494 v~~~I~~L~~aGIkv-~------------mlTGD~~~t---A~~ia~~~gl~~~~ 532 (978)
.++.+++|++||+.- - +.||...+. ++..|+++|+-...
T Consensus 101 ~~e~l~~Lk~aGld~~~~~lEt~~~~~~~i~~~~~~~~~l~~i~~a~~~Gi~v~s 155 (279)
T PRK08508 101 SVEQLKELKKAGIFSYNHNLETSKEFFPKICTTHTWEERFQTCENAKEAGLGLCS 155 (279)
T ss_pred CHHHHHHHHHcCCCEEcccccchHHHhcCCCCCCCHHHHHHHHHHHHHcCCeecc
Confidence 589999999999933 3 456665555 44458888874433
No 224
>PRK03557 zinc transporter ZitB; Provisional
Probab=24.84 E-value=9.6e+02 Score=26.43 Aligned_cols=55 Identities=11% Similarity=0.010 Sum_probs=36.5
Q ss_pred hHhHHHHHHHHHHHHHHHHHHHHhhccccccchhhHHHHHHHHHHhhhhHhhhhccc
Q 002029 702 SSMICYFFYKNIAFGFTLFFFEAYASFSGQPVYNDWFLSLYNVFFTSLPVIALGVFD 758 (978)
Q Consensus 702 ~~~i~~~~~~n~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~n~i~~~~p~~~l~~~~ 758 (978)
++.+.+.+.-|+++..+.+++.++++ ...++.+-.-.+.+++...+..+++.+-.
T Consensus 18 ~r~~~~~~~~n~~l~i~k~~~g~~tg--S~AllaDa~hsl~D~~~~~~~l~a~~~s~ 72 (312)
T PRK03557 18 ARRLLYAFGVTAGFMLVEVIGGFLSG--SLALLADAGHMLTDAAALLFALLAVQFSR 72 (312)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHhh--hHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 45567788888888877777777753 23446666667777777666666665543
No 225
>TIGR00676 fadh2 5,10-methylenetetrahydrofolate reductase, prokaryotic form. This protein is an FAD-containing flavoprotein.
Probab=24.84 E-value=2.6e+02 Score=30.31 Aligned_cols=42 Identities=14% Similarity=0.260 Sum_probs=36.6
Q ss_pred cccEEEEEEeeccccCCChHHHHHHHHHcCCe-EEEEcCCChh
Q 002029 476 KNLILLGATAVEDKLQNGVPECIDKLAQAGIK-LWVLTGDKME 517 (978)
Q Consensus 476 ~dl~llG~i~ieD~lr~~v~~~I~~L~~aGIk-v~mlTGD~~~ 517 (978)
.++..+--+...|.=+.+..+.+..++++||+ +..+|||...
T Consensus 57 ~g~~~i~Hlt~r~~n~~~l~~~L~~~~~~Gi~nvL~l~GD~~~ 99 (272)
T TIGR00676 57 TGIPTVPHLTCIGATREEIREILREYRELGIRHILALRGDPPK 99 (272)
T ss_pred cCCCeeEEeeecCCCHHHHHHHHHHHHHCCCCEEEEeCCCCCC
Confidence 47888888888998888999999999999995 5569999985
No 226
>PRK02261 methylaspartate mutase subunit S; Provisional
Probab=24.17 E-value=2.1e+02 Score=27.41 Aligned_cols=80 Identities=15% Similarity=0.176 Sum_probs=55.5
Q ss_pred HHHHccceeEeeEEEeCCHHHHHHHHHHHHHHhhcccccHHHHHHHHHHHhhcccEEEEEEeeccccCCChHHHHHHHHH
Q 002029 424 EYADAGLRTLILAYRELDEKEYKQFNEEFTEAKNSVSADREELAEEIAEKIEKNLILLGATAVEDKLQNGVPECIDKLAQ 503 (978)
Q Consensus 424 ~~a~~Glr~l~~A~r~l~~~e~~~~~~~~~~a~~~l~~~r~~~~~~~~~~ie~dl~llG~i~ieD~lr~~v~~~I~~L~~ 503 (978)
.+...|++|+.++... +.+++.+ .-.+.+-.++|+....-...+.+++.++.|++
T Consensus 26 ~lr~~G~eVi~LG~~v-p~e~i~~------------------------~a~~~~~d~V~lS~~~~~~~~~~~~~~~~L~~ 80 (137)
T PRK02261 26 ALTEAGFEVINLGVMT-SQEEFID------------------------AAIETDADAILVSSLYGHGEIDCRGLREKCIE 80 (137)
T ss_pred HHHHCCCEEEECCCCC-CHHHHHH------------------------HHHHcCCCEEEEcCccccCHHHHHHHHHHHHh
Confidence 4568999999999543 3333211 12346788999998888899999999999999
Q ss_pred cCC-e-EEEEcCCC------hhhHHHHHHHcCc
Q 002029 504 AGI-K-LWVLTGDK------METAINIGFACSL 528 (978)
Q Consensus 504 aGI-k-v~mlTGD~------~~tA~~ia~~~gl 528 (978)
.|. . .|++-|-- ..-....++++|+
T Consensus 81 ~~~~~~~i~vGG~~~~~~~~~~~~~~~l~~~G~ 113 (137)
T PRK02261 81 AGLGDILLYVGGNLVVGKHDFEEVEKKFKEMGF 113 (137)
T ss_pred cCCCCCeEEEECCCCCCccChHHHHHHHHHcCC
Confidence 955 2 35555543 2334467788885
No 227
>KOG2189 consensus Vacuolar H+-ATPase V0 sector, subunit a [Energy production and conversion]
Probab=23.83 E-value=1.2e+03 Score=29.02 Aligned_cols=28 Identities=4% Similarity=0.105 Sum_probs=17.5
Q ss_pred cccHHHHHHHHHHHHHHHHHHHHHHHHh
Q 002029 781 LFSWTRILGWALNGVANAAIIFFFCIHA 808 (978)
Q Consensus 781 ~~~~~~~~~~~~~~~~~s~~~~~~~~~~ 808 (978)
+.|....-..++.|+.|-....++.++.
T Consensus 530 FLNS~KMKmSIIlGi~hM~fGv~lS~~N 557 (829)
T KOG2189|consen 530 FLNSMKMKMSIILGIIHMTFGVILSVFN 557 (829)
T ss_pred hhhhhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3454445556678888877666665543
No 228
>PF04341 DUF485: Protein of unknown function, DUF485; InterPro: IPR007436 This family includes several putative integral membrane proteins.
Probab=23.77 E-value=2.5e+02 Score=24.75 Aligned_cols=68 Identities=13% Similarity=0.134 Sum_probs=30.9
Q ss_pred HHHHHHHHHHHHHHHhccCccccchhHHHHHHHhcCChHHHHHHHHHHHHHHHHHHHHHHHHHh-hCCCHHHHHH
Q 002029 857 IWGGITFWYIFLLAYGAMDPYISTTAYKVFIEACAPAPSFWLITLLVLMSSLLPYFTYSAIQMR-FFPLHHQMIQ 930 (978)
Q Consensus 857 i~~si~~~~i~~~i~~~i~~~~~~~~~~~~~~~~~~s~~~wl~il~~~~~~ll~~~~~k~~~r~-~~p~~~~~~r 930 (978)
....++.++.+.++..+.|..+....+. ......|+..++..+++++...+|-..-+. +-|...++.+
T Consensus 22 ~~i~l~~y~~~~ll~a~~p~~m~~~v~~------G~~t~g~~~g~~~~~~~~~l~~~Yv~~An~~~D~l~~~i~~ 90 (91)
T PF04341_consen 22 SAIFLVLYFGFVLLSAFAPELMATPVFP------GSLTLGIVLGLGQIVFAWVLTWLYVRRANREFDPLARAIRE 90 (91)
T ss_pred HHHHHHHHHHHHHHHHHCHHHHcCcccC------CCcCHHHHHHHHHHHHHHHHHHHHHHHHccccCHHHHHHHh
Confidence 3445566666666667776543332110 012222333444444555555555444333 4444444443
No 229
>COG5012 Predicted cobalamin binding protein [General function prediction only]
Probab=23.64 E-value=1e+02 Score=31.92 Aligned_cols=79 Identities=18% Similarity=0.192 Sum_probs=55.6
Q ss_pred HHHccceeEeeEEEeCCHHHHHHHHHHHHHHhhcccccHHHHHHHHHHHhhcccEEEEEEeeccccCCChHHHHHHHHHc
Q 002029 425 YADAGLRTLILAYRELDEKEYKQFNEEFTEAKNSVSADREELAEEIAEKIEKNLILLGATAVEDKLQNGVPECIDKLAQA 504 (978)
Q Consensus 425 ~a~~Glr~l~~A~r~l~~~e~~~~~~~~~~a~~~l~~~r~~~~~~~~~~ie~dl~llG~i~ieD~lr~~v~~~I~~L~~a 504 (978)
+...|++++=++ ++.+.++|-+- -.|.+-.+++..++--.--.+.++.|++|++.
T Consensus 128 l~~aGfevidLG-~dvP~e~fve~------------------------a~e~k~d~v~~SalMTttm~~~~~viE~L~ee 182 (227)
T COG5012 128 LEAAGFEVIDLG-RDVPVEEFVEK------------------------AKELKPDLVSMSALMTTTMIGMKDVIELLKEE 182 (227)
T ss_pred HHhCCcEEEecC-CCCCHHHHHHH------------------------HHHcCCcEEechHHHHHHHHHHHHHHHHHHHc
Confidence 466799999998 45555544321 11345678899998888888899999999999
Q ss_pred CCeEEEEcC-CChhhHHHHHHHcCc
Q 002029 505 GIKLWVLTG-DKMETAINIGFACSL 528 (978)
Q Consensus 505 GIkv~mlTG-D~~~tA~~ia~~~gl 528 (978)
|+|--+++| --.......|.+.|-
T Consensus 183 GiRd~v~v~vGGApvtq~~a~~iGA 207 (227)
T COG5012 183 GIRDKVIVMVGGAPVTQDWADKIGA 207 (227)
T ss_pred CCccCeEEeecCccccHHHHHHhCC
Confidence 998777666 333344455666664
No 230
>cd05013 SIS_RpiR RpiR-like protein. RpiR contains a SIS (Sugar ISomerase) domain, which is found in many phosphosugar isomerases and phosphosugar binding proteins. In E. coli, rpiR negatively regulates the expression of rpiB gene. Both rpiB and rpiA are ribose phosphate isomerases that catalyze the reversible reactions of ribose 5-phosphate into ribulose 5-phosphate.
Probab=22.40 E-value=6.1e+02 Score=23.27 Aligned_cols=28 Identities=14% Similarity=0.158 Sum_probs=23.6
Q ss_pred CChHHHHHHHHHcCCeEEEEcCCChhhH
Q 002029 492 NGVPECIDKLAQAGIKLWVLTGDKMETA 519 (978)
Q Consensus 492 ~~v~~~I~~L~~aGIkv~mlTGD~~~tA 519 (978)
+++.++++.+++.|++++.+|++.....
T Consensus 74 ~~~~~~~~~a~~~g~~iv~iT~~~~~~l 101 (139)
T cd05013 74 KETVEAAEIAKERGAKVIAITDSANSPL 101 (139)
T ss_pred HHHHHHHHHHHHcCCeEEEEcCCCCChh
Confidence 4678899999999999999999876533
No 231
>PRK10053 hypothetical protein; Provisional
Probab=22.27 E-value=50 Score=31.26 Aligned_cols=31 Identities=23% Similarity=0.365 Sum_probs=25.0
Q ss_pred CCCcccccCcccccccccceEEEeeCCcccc
Q 002029 191 TDKPARARTSNLNEELGQVDTILSDKTGTLT 221 (978)
Q Consensus 191 ~~~~~~~r~~~~~e~Lg~v~~I~sDKTGTLT 221 (978)
.+..-+.-..+++..||.=+|+|.|+||+++
T Consensus 59 ~Dd~~V~L~G~Iv~~lg~d~Y~F~D~tG~I~ 89 (130)
T PRK10053 59 HDGATVSLRGNLIDHKGDDRYVFRDKSGEIN 89 (130)
T ss_pred cCCCeEEEEEEEEEEeCCceEEEECCCCcEE
Confidence 4444456678899999999999999999863
No 232
>TIGR01454 AHBA_synth_RP 3-amino-5-hydroxybenoic acid synthesis related protein. The most closely related enzyme below the noise cutoff is IndB which is involved in the biosynthesis of Indigoidine in Pectobacterium (Erwinia) chrysanthemi, a gamma proteobacter. This enzyme is similarly related to PGP. In this case, too it is unclear what role would be be played by a PGPase activity.
Probab=22.21 E-value=5.9e+02 Score=25.73 Aligned_cols=39 Identities=15% Similarity=0.092 Sum_probs=27.9
Q ss_pred cCCChHHHHHHHHHcCCeE--EEEcCCChhhHHHHHHHcCcc
Q 002029 490 LQNGVPECIDKLAQAGIKL--WVLTGDKMETAINIGFACSLL 529 (978)
Q Consensus 490 lr~~v~~~I~~L~~aGIkv--~mlTGD~~~tA~~ia~~~gl~ 529 (978)
.+|...-..+.+++.|++. ++.-||.. .-+..|++.|+-
T Consensus 130 ~KP~~~~~~~~~~~~~~~~~~~l~igD~~-~Di~aA~~~Gi~ 170 (205)
T TIGR01454 130 PKPAPDIVREALRLLDVPPEDAVMVGDAV-TDLASARAAGTA 170 (205)
T ss_pred CCCChHHHHHHHHHcCCChhheEEEcCCH-HHHHHHHHcCCe
Confidence 4565555555566778754 78889986 678889999983
No 233
>TIGR01459 HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolase, TIGR01459. This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram negative and primarily alpha proteobacteria. Only one sequence hase been annotated as other than "hypothetical." That one, from Brucella, is annotated as related to NagD, but only by sequence similarity and should be treated with some skepticism. (See comments for Class IIA subfamily)
Probab=21.93 E-value=92 Score=32.95 Aligned_cols=28 Identities=7% Similarity=0.024 Sum_probs=20.9
Q ss_pred CCChHHHHHHHHHcCCeEEEEcCCChhhH
Q 002029 491 QNGVPECIDKLAQAGIKLWVLTGDKMETA 519 (978)
Q Consensus 491 r~~v~~~I~~L~~aGIkv~mlTGD~~~tA 519 (978)
-+++.++++.|++.|++. ++|+.....+
T Consensus 140 ~~~~~~~l~~l~~~g~~~-i~tN~d~~~~ 167 (242)
T TIGR01459 140 LDEFDELFAPIVARKIPN-ICANPDRGIN 167 (242)
T ss_pred HHHHHHHHHHHHhCCCcE-EEECCCEecc
Confidence 467888898888889986 6677655444
No 234
>PF06123 CreD: Inner membrane protein CreD; InterPro: IPR010364 This family consists of several bacterial CreD or Cet inner membrane proteins. Dominant mutations of the cet gene of Escherichia coli result in tolerance to colicin E2 and increased amounts of an inner membrane protein with a Mr of 42,000. The cet gene is shown to be in the same operon as the phoM gene, which is required in a phoR background for expression of the structural gene for alkaline phosphatase, phoA. Although the Cet protein is not required for phoA expression, it has been suggested that the Cet protein has an enhancing effect on the transcription of phoA [].
Probab=21.66 E-value=1.3e+03 Score=26.82 Aligned_cols=59 Identities=12% Similarity=0.078 Sum_probs=34.1
Q ss_pred hhhhHhhHhHHHHHHHHHHHHHHHHHHHHhhccccccchhhHHHHHHHHHHhhhhHhhhhccc
Q 002029 696 WCYRRISSMICYFFYKNIAFGFTLFFFEAYASFSGQPVYNDWFLSLYNVFFTSLPVIALGVFD 758 (978)
Q Consensus 696 ~~~~~i~~~i~~~~~~n~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~n~i~~~~p~~~l~~~~ 758 (978)
..|+.+.+.+.|.+---....+..|++-... .....++|+++.-+-...|-.+.+++-+
T Consensus 289 d~Y~~~~Ra~KYgiLFI~LTF~~fflfE~~~----~~~iHpiQY~LVGlAl~lFYlLLLSlSE 347 (430)
T PF06123_consen 289 DHYQKSERAVKYGILFIGLTFLAFFLFELLS----KLRIHPIQYLLVGLALVLFYLLLLSLSE 347 (430)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh----cCcccHHHHHHHHHHHHHHHHHHHHHHh
Confidence 3455666666776432222222333333332 3347888998888777777777777643
No 235
>PF06570 DUF1129: Protein of unknown function (DUF1129); InterPro: IPR009214 There are currently no experimental data for members of this group or their homologues. However, these proteins contain predicted integral membrane proteins (with several transmembrane segments).
Probab=21.45 E-value=5.6e+02 Score=26.31 Aligned_cols=8 Identities=0% Similarity=0.164 Sum_probs=3.6
Q ss_pred HHHHHHhh
Q 002029 914 YSAIQMRF 921 (978)
Q Consensus 914 ~k~~~r~~ 921 (978)
..+++++|
T Consensus 194 ~~~lkkk~ 201 (206)
T PF06570_consen 194 RFYLKKKY 201 (206)
T ss_pred HHHHHHHh
Confidence 34444444
No 236
>PF00690 Cation_ATPase_N: Cation transporter/ATPase, N-terminus; InterPro: IPR004014 ATPases (or ATP synthases) are membrane-bound enzyme complexes/ion transporters that combine ATP synthesis and/or hydrolysis with the transport of protons across a membrane. ATPases can harness the energy from a proton gradient, using the flux of ions across the membrane via the ATPase proton channel to drive the synthesis of ATP. Some ATPases work in reverse, using the energy from the hydrolysis of ATP to create a proton gradient. There are different types of ATPases, which can differ in function (ATP synthesis and/or hydrolysis), structure (e.g., F-, V- and A-ATPases, which contain rotary motors) and in the type of ions they transport [, ]. The different types include: F-ATPases (F1F0-ATPases), which are found in mitochondria, chloroplasts and bacterial plasma membranes where they are the prime producers of ATP, using the proton gradient generated by oxidative phosphorylation (mitochondria) or photosynthesis (chloroplasts). V-ATPases (V1V0-ATPases), which are primarily found in eukaryotic vacuoles and catalyse ATP hydrolysis to transport solutes and lower pH in organelles. A-ATPases (A1A0-ATPases), which are found in Archaea and function like F-ATPases (though with respect to their structure and some inhibitor responses, A-ATPases are more closely related to the V-ATPases). P-ATPases (E1E2-ATPases), which are found in bacteria and in eukaryotic plasma membranes and organelles, and function to transport a variety of different ions across membranes. E-ATPases, which are cell-surface enzymes that hydrolyse a range of NTPs, including extracellular ATP. P-ATPases (sometime known as E1-E2 ATPases) (3.6.3.- from EC) are found in bacteria and in a number of eukaryotic plasma membranes and organelles []. P-ATPases function to transport a variety of different compounds, including ions and phospholipids, across a membrane using ATP hydrolysis for energy. There are many different classes of P-ATPases, each of which transports a specific type of ion: H+, Na+, K+, Mg2+, Ca2+, Ag+ and Ag2+, Zn2+, Co2+, Pb2+, Ni2+, Cd2+, Cu+ and Cu2+. P-ATPases can be composed of one or two polypeptides, and can usually assume two main conformations called E1 and E2. This entry represents the conserved N-terminal region found in several classes of cation-transporting P-type ATPases, including those that transport H+ (3.6.3.6 from EC), Na+ (3.6.3.7 from EC), Ca2+ (3.6.3.8 from EC), Na+/K+ (3.6.3.9 from EC), and H+/K+ (3.6.3.10 from EC). In the H+/K+- and Na+/K+-exchange P-ATPases, this domain is found in the catalytic alpha chain. In gastric H+/K+-ATPases, this domain undergoes reversible sequential phosphorylation inducing conformational changes that may be important for regulating the function of these ATPases [, ]. More information about this protein can be found at Protein of the Month: ATP Synthases [].; PDB: 3KDP_C 3N2F_A 3B8E_A 3N23_A 2XZB_A 1MHS_B 3A3Y_A 2ZXE_A 3B8C_A 3B9B_A ....
Probab=21.04 E-value=1.3e+02 Score=24.75 Aligned_cols=36 Identities=14% Similarity=0.119 Sum_probs=28.9
Q ss_pred hccccCCCCCCcCHHHHHHHHHHHHHHHHHHHHHHH
Q 002029 70 VFQNSTGPPSKRSKVERRMDKIIYFLFGILVLMSFI 105 (978)
Q Consensus 70 i~~~~~~~~~k~s~l~~~~n~~~~~~~~~~~~~~~i 105 (978)
.+.|.-..+.+++.+.+.++.+...+.+++++.+++
T Consensus 33 ~G~N~l~~~~~~s~~~~~~~~f~~~~~~lL~~aail 68 (69)
T PF00690_consen 33 YGPNELPEPKKKSLWRIFLKQFKNPFIILLLIAAIL 68 (69)
T ss_dssp HSSSSTTTTTSSSHHHHHHHHTTSHHHHHHHHHHHH
T ss_pred cccccccccccCcHHHHHHHHHHhHHHHHHHHHHHH
Confidence 377777788889999999999988887777766665
No 237
>cd02072 Glm_B12_BD B12 binding domain of glutamate mutase (Glm). Glutamate mutase catalysis the conversion of (S)-glutamate with (2S,3S)-3-methylaspartate. The rearrangement reaction is initiated by the extraction of a hydrogen from the protein-bound substrate by a 5'-desoxyadenosyl radical, which is generated by the homolytic cleavage of the organometallic bond of the cofactor B12. Glm is a heterotetrameric molecule consisting of two alpha and two epsilon polypeptide chains.
Probab=20.75 E-value=2.3e+02 Score=26.83 Aligned_cols=80 Identities=14% Similarity=0.179 Sum_probs=55.3
Q ss_pred HHHHccceeEeeEEEeCCHHHHHHHHHHHHHHhhcccccHHHHHHHHHHHhhcccEEEEEEeeccccCCChHHHHHHHHH
Q 002029 424 EYADAGLRTLILAYRELDEKEYKQFNEEFTEAKNSVSADREELAEEIAEKIEKNLILLGATAVEDKLQNGVPECIDKLAQ 503 (978)
Q Consensus 424 ~~a~~Glr~l~~A~r~l~~~e~~~~~~~~~~a~~~l~~~r~~~~~~~~~~ie~dl~llG~i~ieD~lr~~v~~~I~~L~~ 503 (978)
-+...|+.|+-++... +.+++- ..-.|.+-.++|+-++-=.--+..+++++.|++
T Consensus 22 ~L~~~GfeVidLG~~v-~~e~~v------------------------~aa~~~~adiVglS~L~t~~~~~~~~~~~~l~~ 76 (128)
T cd02072 22 AFTEAGFNVVNLGVLS-PQEEFI------------------------DAAIETDADAILVSSLYGHGEIDCKGLREKCDE 76 (128)
T ss_pred HHHHCCCEEEECCCCC-CHHHHH------------------------HHHHHcCCCEEEEeccccCCHHHHHHHHHHHHH
Confidence 3567999999988544 333221 122356888999999988888899999999999
Q ss_pred cCC-eE-EEEcCCCh------hhHHHHHHHcCc
Q 002029 504 AGI-KL-WVLTGDKM------ETAINIGFACSL 528 (978)
Q Consensus 504 aGI-kv-~mlTGD~~------~tA~~ia~~~gl 528 (978)
+|+ .+ +++-|--. +....-.+++|+
T Consensus 77 ~gl~~v~vivGG~~~i~~~d~~~~~~~L~~~Gv 109 (128)
T cd02072 77 AGLKDILLYVGGNLVVGKQDFEDVEKRFKEMGF 109 (128)
T ss_pred CCCCCCeEEEECCCCCChhhhHHHHHHHHHcCC
Confidence 998 55 44445421 233455677886
No 238
>TIGR02244 HAD-IG-Ncltidse HAD superfamily (subfamily IG) hydrolase, 5'-nucleotidase. A TIGRFAMs model (TIGR01993) represents a (putative) family of _pyrimidine_ 5'-nucleotidases which are also subfamily I HAD's, which should not be confused with the current model.
Probab=20.75 E-value=1.3e+02 Score=33.79 Aligned_cols=37 Identities=22% Similarity=0.221 Sum_probs=34.3
Q ss_pred CCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHc-C
Q 002029 491 QNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFAC-S 527 (978)
Q Consensus 491 r~~v~~~I~~L~~aGIkv~mlTGD~~~tA~~ia~~~-g 527 (978)
-|+++++++.|+++|+++.++|+-....+..+...+ |
T Consensus 186 ~pgl~elL~~Lr~~G~klfLvTNS~~~yt~~im~~l~g 223 (343)
T TIGR02244 186 DPKLPLFLSKLKEHGKKLFLLTNSDYDYTDKGMKYLLG 223 (343)
T ss_pred chhHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhhC
Confidence 579999999999999999999999999999988885 5
No 239
>PF04551 GcpE: GcpE protein; InterPro: IPR004588 This protein previously of unknown biochemical function is essential in Escherichia coli. It has now been characterised as 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase, which converts 2C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-2,4CPP) into 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate in the sixth step of nonmevalonate terpenoid biosynthesis. The family is largely restricted to bacteria, where it is widely but not universally distributed. No homology can be detected between this family and other proteins.; GO: 0046429 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase activity, 0016114 terpenoid biosynthetic process, 0055114 oxidation-reduction process; PDB: 2Y0F_C 3NOY_A.
Probab=20.63 E-value=1.2e+03 Score=26.14 Aligned_cols=115 Identities=23% Similarity=0.342 Sum_probs=64.3
Q ss_pred HHHHhcccchhhHHHHHHHHHHHHHccceeEeeEEEeCCHHHHHHHHHHHHHHhhcccccHHHHHHHHHHHhhcccEEEE
Q 002029 403 MFERLAENGREFEEQTKEHINEYADAGLRTLILAYRELDEKEYKQFNEEFTEAKNSVSADREELAEEIAEKIEKNLILLG 482 (978)
Q Consensus 403 i~~~~~~~~~~~~~~~~~~l~~~a~~Glr~l~~A~r~l~~~e~~~~~~~~~~a~~~l~~~r~~~~~~~~~~ie~dl~llG 482 (978)
++++.....+...+...++++.+.+.|+.-++++.|.-+....-+ .|. .+++.+..-| -+|
T Consensus 147 ~~~ky~~t~~amvesA~~~~~~le~~~f~~iviSlKsSdv~~~i~---ayr---------------~la~~~dyPL-HLG 207 (359)
T PF04551_consen 147 ILEKYGPTPEAMVESALEHVRILEELGFDDIVISLKSSDVPETIE---AYR---------------LLAERMDYPL-HLG 207 (359)
T ss_dssp HHHHHCHHHHHHHHHHHHHHHHHHHCT-GGEEEEEEBSSHHHHHH---HHH---------------HHHHH--S-E-EEE
T ss_pred HHhhccchHHHHHHHHHHHHHHHHHCCCCcEEEEEEeCChHHHHH---HHH---------------HHHHhcCCCe-EEe
Confidence 444443334456677788999999999999999999876654321 111 1223333344 347
Q ss_pred EEeeccccCC--ChHHHHHHHHHcCC--eEE-EEcCCCh---hhHHHHHHHcCccccCceEE
Q 002029 483 ATAVEDKLQN--GVPECIDKLAQAGI--KLW-VLTGDKM---ETAINIGFACSLLRQGMRQV 536 (978)
Q Consensus 483 ~i~ieD~lr~--~v~~~I~~L~~aGI--kv~-mlTGD~~---~tA~~ia~~~gl~~~~~~~i 536 (978)
++---....- .+.-.|-.|-..|| .++ -+|+|.. ..|..|-+.+|+-....+++
T Consensus 208 vTEAG~~~~g~IkSsigiG~LL~~GIGDTIRVSLt~~p~~EV~va~~IL~al~lR~~g~~~I 269 (359)
T PF04551_consen 208 VTEAGTGEDGTIKSSIGIGALLLDGIGDTIRVSLTGDPVEEVKVAFEILQALGLRKRGPEII 269 (359)
T ss_dssp BSSEESCHHHHHHHHHHHHHHHHTT--SEEEE-ECSSCCCHHHHHHHHHHHTTSS-SS-EEE
T ss_pred ecCCCCcccchhHHHHHHHHHHHcCCCCEEEEECCCCchHHHHHHHHHHHHhCcCcCCceee
Confidence 7643322221 22344667888888 343 3688874 46677778888855444433
Done!