Query 002030
Match_columns 978
No_of_seqs 141 out of 160
Neff 5.2
Searched_HMMs 46136
Date Thu Mar 28 14:55:47 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/002030.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/002030hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PF05664 DUF810: Protein of un 100.0 4E-203 8E-208 1779.2 64.2 658 45-742 1-677 (677)
2 KOG1011 Neurotransmitter relea 99.9 1E-24 2.2E-29 247.5 36.6 529 303-923 474-1096(1283)
3 KOG1328 Synaptic vesicle prote 99.8 9.6E-15 2.1E-19 169.5 40.4 530 322-919 365-918 (1103)
4 PF10540 Membr_traf_MHD: Munc1 99.7 7.3E-17 1.6E-21 159.6 8.5 110 810-919 2-137 (137)
5 PF06046 Sec6: Exocyst complex 98.9 1.8E-08 4E-13 120.4 16.1 438 436-961 79-531 (566)
6 KOG2180 Late Golgi protein sor 98.0 0.021 4.6E-07 69.1 34.1 521 327-923 139-704 (793)
7 KOG2286 Exocyst complex subuni 96.9 1.9 4E-05 53.5 33.7 350 512-963 271-636 (667)
8 PF04091 Sec15: Exocyst comple 96.6 0.0098 2.1E-07 67.1 9.9 251 613-910 27-279 (311)
9 PF04437 RINT1_TIP1: RINT-1 / 96.4 0.29 6.3E-06 58.6 21.2 291 580-914 131-451 (494)
10 COG5173 SEC6 Exocyst complex s 94.8 13 0.00029 45.0 30.2 312 579-965 373-705 (742)
11 KOG3543 Ca2+-dependent activat 93.7 3.7 8E-05 49.8 18.4 226 383-641 719-953 (1218)
12 PF04100 Vps53_N: Vps53-like, 71.9 2.1E+02 0.0046 33.7 26.6 115 491-607 262-383 (383)
13 PF06292 DUF1041: Domain of Un 67.0 23 0.0005 34.4 7.5 54 472-525 49-104 (106)
14 PF15080 DUF4547: Domain of un 61.6 22 0.00047 37.0 6.4 96 809-923 70-168 (196)
15 PF14923 CCDC142: Coiled-coil 60.2 10 0.00022 45.2 4.4 102 802-913 276-383 (450)
16 KOG0433 Isoleucyl-tRNA synthet 49.9 66 0.0014 40.7 8.9 101 722-846 690-795 (937)
17 PF10474 DUF2451: Protein of u 45.8 1.6E+02 0.0034 32.4 10.4 155 719-882 3-166 (234)
18 PHA00781 hypothetical protein 31.6 63 0.0014 27.6 3.5 39 274-313 11-49 (59)
19 PF12854 PPR_1: PPR repeat 24.5 1E+02 0.0022 23.5 3.3 33 274-310 1-33 (34)
20 PRK05094 dsDNA-mimic protein; 24.0 52 0.0011 32.1 2.0 21 44-64 5-25 (107)
21 PF08385 DHC_N1: Dynein heavy 21.8 1.5E+03 0.032 27.5 15.6 88 575-664 443-538 (579)
22 KOG4654 Uncharacterized conser 21.2 3.9E+02 0.0085 28.8 7.8 83 818-902 48-134 (252)
23 KOG2176 Exocyst complex, subun 20.5 2E+03 0.043 28.5 17.7 151 764-919 586-740 (800)
No 1
>PF05664 DUF810: Protein of unknown function (DUF810); InterPro: IPR008528 This family consists of several plant proteins of unknown function.
Probab=100.00 E-value=3.8e-203 Score=1779.25 Aligned_cols=658 Identities=55% Similarity=0.897 Sum_probs=621.8
Q ss_pred CCCchhHHHHHHHHHHHHHhcCCCCCcccccCcccccCCCCCCCCCCcccccccchhhhhHHHHHhCCccccccCCCCcc
Q 002030 45 NISDSELRETAYEILVGACRSTGVRPLTYIPQSERAERTPAPSLSSAPSLQRSLTSTAASKVKKALGMKSIKKRVSGESV 124 (978)
Q Consensus 45 ~ls~~dlRetAYEi~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~k~~lgl~~~~~~~~~~~~ 124 (978)
||||||||||||||||||||+||| ++|++++. ++ ..||+||+||||++++.+ ++.
T Consensus 1 ~ls~~dlRetAYEi~~a~~~~s~~--~~~~~~~~-~~--------------------~~s~~k~~lgl~~~~~~~--~~~ 55 (677)
T PF05664_consen 1 GLSDDDLRETAYEILLASCRSSGG--LIYFSQSK-KK--------------------EKSRVKKALGLKSSKSGS--SVS 55 (677)
T ss_pred CCCHHHHHHHHHHHHHHHHhccCC--CccCcccc-cc--------------------chhHHHHHhcCCCCCCCC--CCC
Confidence 799999999999999999999965 88877332 11 138999999999988532 445
Q ss_pred CCCCCCCcchHHHHHHHHhhchhhhhHHHHHHHHHHHHhhhccccccccccHHhhcccCCCCCCCHHHHHHHHHHHHHHH
Q 002030 125 GQGKAKRAVTVGELVRAQMRISEQTDSRIRRALLRIAGSQLGKRIETMVLPLELLQQIKPTDFTSQKEYEAWKKRIFKLL 204 (978)
Q Consensus 125 ~~~~~~~~~~~~e~mR~qm~vse~~D~r~Rr~L~r~~~gq~g~r~~~~~lpLeLL~~~~~sdF~d~~ey~~Wq~Rql~vL 204 (978)
+++++|||+|++||||+||||||++|+||||+|||+++||+|||+|+|+|||||||++|+|||+|++||++|||||||+|
T Consensus 56 ~~~~~~~~~~~~e~~r~qm~vse~~d~r~r~~l~~~~~~~~g~r~e~~~lpLeLl~~~~~sdF~d~~ey~~WqkRql~~L 135 (677)
T PF05664_consen 56 SPGRPRRPMTSAEIMRVQMRVSEQMDARIRRALLRAAAGQVGRRAESIVLPLELLQQLKPSDFSDEKEYEQWQKRQLKVL 135 (677)
T ss_pred CCCCCCCcchHHHHHHHHhcccHHHHHHHHHHHHHHHHHHhhcccccccccHHHHhhCCHhhCCCHHHHHHHHHHHHHHH
Confidence 66799999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhhhCCCCCCCCCChhHHHHHHHHHh-----cccCCCCCCcchHHHHHHHHHHHHhhccc-CCCCCCCcccccCCCCc
Q 002030 205 EAGLLMHPHLPLDNTSTDARRLRQIIRG-----AVERPLETGKNYESMQNLRSVVMSLACRS-FDGSISEKCHWAEGFPL 278 (978)
Q Consensus 205 E~gLl~hp~~p~d~~~~~a~~lr~~~~~-----~~~~~~~~~~~se~m~~l~~~~~sLa~r~-~~g~~~e~chWadgypL 278 (978)
||||++||++|+|++|.+|++||+++++ ++.+|++||+|+|+||+||++|++||||+ .+|.++|+|||||||||
T Consensus 136 e~gL~~hp~~~l~~s~~~a~~lr~~~~~~~~~~~~~~~~~~~~~se~~~~l~~~~~~La~r~~~~~~~~e~chWadgypl 215 (677)
T PF05664_consen 136 EAGLLNHPSVPLDKSNASAQRLRQIIAKIREDEAEDKPIDTGKNSESMRALRSAVISLAWRPSRDGSSGETCHWADGYPL 215 (677)
T ss_pred HHHHHhCcCCCccccchhHHHHHHHHHhcccccccCCcCccccccHHHHHHHHHHHHHhcCCCCCCCCCcccccccCCCc
Confidence 9999999999999999999999999999 99999999999999999999999999995 57778999999999999
Q ss_pred cHHHHHHHHHhhhccCCCCchhhhHHHHHHhHHhhhhhhccchHHHHHHHHHHHHHHHhhcCccchhHHHHHHHHHHHHH
Q 002030 279 NLRIYRILLEACFDVNEPTSVIEEVDEVLELIKKTWEILGVNQMLHNLCFGWILFHRYVSTGQVESDLLFAANNLLMEIE 358 (978)
Q Consensus 279 N~~LYe~LL~~~FD~~de~~v~eE~dE~leliK~TW~~LGI~~~lHn~cf~WvlF~qyv~Tgq~e~~LL~aa~~~l~ev~ 358 (978)
|+||||+||++|||++|||+|+||+||+||+||+||++||||||+||+||+||||||||+|| |++||+||+++|+||+
T Consensus 216 N~~LYe~LL~~~FD~~de~~vidE~dEvlellK~tW~~LGIt~~lHn~cf~WVlF~qyv~tg--e~~LL~~a~~~L~ev~ 293 (677)
T PF05664_consen 216 NVRLYEKLLFSVFDILDEGQVIDEVDEVLELLKKTWSILGITQTLHNVCFAWVLFRQYVATG--EPDLLKAAIQQLQEVA 293 (677)
T ss_pred cHHHHHHHHHHHhcccccchHHhhHHHHHHHHHHHhHHhCCCHHHHHHHHHHHHHHHHHhcC--CHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999 7999999999999999
Q ss_pred HHhh-hhcCcchHH------------HHHHHHHHHHHHHHHhhhhhhhhccCCchhhHhHHHHHHHHHhhhhhcchhhhh
Q 002030 359 KDAK-AAKDADYSK------------ILSSILNTILDWAGQRLRDYHDIFHDDNIDSLETVVSLGVLSATILVEGISQEY 425 (978)
Q Consensus 359 ~dak-~~~d~~y~~------------~l~s~L~~i~~W~ekrL~dYH~~f~~~~~~~me~~~sl~~~a~kil~ed~~~~~ 425 (978)
+|++ .++||.|.+ +|+|+|++|++|+||||+|||+||++|+++.||++|+|++.+++||+||++.++
T Consensus 294 ~d~~~~~~~~~y~~sl~~~~~~~~l~ll~s~L~si~~W~ekrL~dYH~~f~~~~~~~me~llsl~~~a~~il~ed~~~~~ 373 (677)
T PF05664_consen 294 KDAKRATKDPLYLKSLRCSVETSDLSLLSSVLSSIQGWAEKRLLDYHDHFSEGNIGVMEGLLSLAVSAAKILGEDVSREY 373 (677)
T ss_pred HhccccccchhhhhhhhccccchhhHHHHHHHHHHHHHHHHHHHHHHhhccCcchHHHHHHHHHHHHHHHHHhhchhHHH
Confidence 9999 599999998 999999999999999999999999999998999999999999999999999777
Q ss_pred ccccCccccchhhHHHHHHhhHHHHHHHHHhhhccccccccCCCCchHHHHHHHHHHHHHHhhhhhccccchhhhcchhH
Q 002030 426 RGKKNQVDVAHDRVDTYIRSSLRTAFAQKLKKVNSSKKLSKNQPNHLPVLSILAQDVTELAFDEKTIFSPILKRWHPLAA 505 (978)
Q Consensus 426 ~~~~~~~~~~~~rid~yI~sS~~~af~~~~e~~~~~~~~~~~~~~~~~~L~~LA~~~~~la~~e~~~fSPiL~~whp~A~ 505 (978)
+...+. +++++||+||+|||++||+|+++..+.+. +.++.|+|++||+||++||.+|+++|||+|++|||.|+
T Consensus 374 ~~~~~~--~~~~~ie~YIrsSi~~Af~~~~~~~~~~~-----~~~~~~~L~~LA~ei~~la~~e~~~FsPiLk~whP~a~ 446 (677)
T PF05664_consen 374 RRKRSK--VARSRIESYIRSSIKAAFARMASSVDSRS-----DSEPSHVLAQLAKEIKELAKKEKEVFSPILKRWHPNAA 446 (677)
T ss_pred Hhhhcc--chHHHHHHHHHHHHHHHHHhhhhhhhhcc-----cccchHHHHHHHHHHHHHHHHhHHhcCchhcccCchHH
Confidence 654322 78999999999999999999998888775 89999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhhHHHHHhhhhccChhHHhhchhhhHHHHHHHHHHhhccccCCCCcccccccCCCchhhhhhHHHHHH
Q 002030 506 GVAVATLHSCYGNELRQFVSGITELTPDAIQVLLAADKLEKNLVQIAVEDSVDSEDGGKSIIQEMPPYEAEAAIGNLAKS 585 (978)
Q Consensus 506 ~vAa~~Lh~~Yg~~Lk~~L~~v~~lt~d~~~vl~aAd~LE~~L~~i~~e~s~~~~dggk~~~r~m~PyeiE~~~~~lV~~ 585 (978)
+|||++||+|||++|||||+++++||+|+++||++||+|||+|+||+ +++|+||||+++|+|+||++|+++.+||++
T Consensus 447 ~VAa~~LH~~Yg~~Lk~~L~~~~~LT~d~v~VL~aA~~LEk~Lvq~~---~~~~edggk~~~rem~Py~vE~~i~~lv~~ 523 (677)
T PF05664_consen 447 GVAAATLHSCYGNELKQFLSGVTHLTPDVVEVLQAADKLEKALVQMV---SVDCEDGGKSLIREMPPYEVESLISNLVKR 523 (677)
T ss_pred HHHHHHHHHHHHHHHHHHHcccccCCHHHHHHHHHHHHHHHHHHHHH---HhhccccccccccCCCceeHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999998 778899999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHhhhhccccccCCCCCCCCccHHHHHHHHHHHHHHHhcCCCCccccchHHHHHhHHHHHHHHHHHHH
Q 002030 586 WINIRVDRLKEWVCRNLQQEVWNARANKESIAPSAVEVLRTIDETMEAFFMLPIPMHSVLLPELISGLDGCLQHYVLKAK 665 (978)
Q Consensus 586 Wi~~~~~ki~ewV~raiq~E~W~P~s~~e~hS~SVVDvFrmi~Etvd~ff~L~~p~~~~lL~~Ls~Gid~~lq~Y~~~v~ 665 (978)
||+++++++.+||+||+++|+|+|++++++||+|||||||||+||||+||+||||+++.+|++|++||+++||+||++|+
T Consensus 524 Wi~~~~~~l~ewv~ra~~qE~W~P~S~~e~hs~SvVEvfri~~eTvd~ff~L~~~~~~~~l~~L~~gld~~lq~Y~~~v~ 603 (677)
T PF05664_consen 524 WIQEQLERLNEWVDRAIKQEKWNPRSKEERHSPSVVEVFRIFNETVDQFFQLPWPMHADFLQALSKGLDKALQRYCEKVE 603 (677)
T ss_pred HHHHHHHHHHHHHHHHHhhccCCcCCCCCCCcchHHHHHHHHHHHHHHHHcCCCCCchHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hccCCCCCCCCCCCcccccccCcchhhhhhhccccccccccCcCCCCCCCCCCCcccceeecccHHHHHHHHHHHHH
Q 002030 666 SGCGSRNNFIPTMPALTRCTMGSKFGAFKRKEKLHTAQKRKSQVGTTNGDNSFGVPQLCCRINTFQHIRKELEVLEK 742 (978)
Q Consensus 666 ~~~gske~~iP~~P~LTR~~~eskf~~~~KKa~~~~~~~e~~~~g~~~~~~s~~~~~LCVrLNnLeyil~qLd~LEk 742 (978)
++||++++|+|++|+||||+++++|+++|||+.++.....++.. .+.+++++|++|||||||||+++||++|||
T Consensus 604 ~~~gsk~~liP~~P~LTR~~~~sk~~~~~Kk~~~~~~~~~~~~~---~~~~~~~~~~lcVrLNtL~yil~qL~~LEK 677 (677)
T PF05664_consen 604 QSCGSKQSLIPPLPPLTRCKKDSKFKKLWKKKWKSSTNPDERFS---SKINSQFTPRLCVRLNTLEYILSQLDKLEK 677 (677)
T ss_pred HhcccccccCCCCchhhhhhhhhhHHHHHHHHhcCccccccccc---cCcccCccCceeeeecHHHHHHHHHHhhcC
Confidence 99999999999999999999999999999998555432222211 335589999999999999999999999996
No 2
>KOG1011 consensus Neurotransmitter release regulator, UNC-13 [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport]
Probab=99.95 E-value=1e-24 Score=247.47 Aligned_cols=529 Identities=17% Similarity=0.279 Sum_probs=363.3
Q ss_pred HHHHHHhHHhhhhhhccch-HHHHHHHHHHHHHHHhhcCccchhHHHHHHHHHHHH-HH-Hhhh---hcCcc--------
Q 002030 303 VDEVLELIKKTWEILGVNQ-MLHNLCFGWILFHRYVSTGQVESDLLFAANNLLMEI-EK-DAKA---AKDAD-------- 368 (978)
Q Consensus 303 ~dE~leliK~TW~~LGI~~-~lHn~cf~WvlF~qyv~Tgq~e~~LL~aa~~~l~ev-~~-dak~---~~d~~-------- 368 (978)
+.|+.+-.---+.+=.|-| |-|-.| |-.+|.+-|- |..+..-.+-++-. |. .|.. ..|.+
T Consensus 474 aqeivdefamrygiesiyqamthfac----l~skymcpgv--pavmstllaninayyahttastnvsasdrfaasnfgke 547 (1283)
T KOG1011|consen 474 AQEIVDEFAMRYGIESIYQAMTHFAC----LSSKYMCPGV--PAVMSTLLANINAYYAHTTASTNVSASDRFAASNFGKE 547 (1283)
T ss_pred HHHHHHHHHHHHhHHHHHHHHHHHHH----HhhcccCCCc--HHHHHHHHHhhhHHhhccccccccCcchhhhhhcccHH
Confidence 4555543333333333434 346565 6789999997 77665444443311 10 0110 11222
Q ss_pred -hHHHHHHHHHHHHHHHHHhhhhhhhhccCCchhhHhHHHHH-------HHHHhhhhhcchhhhhccccCccccchhhHH
Q 002030 369 -YSKILSSILNTILDWAGQRLRDYHDIFHDDNIDSLETVVSL-------GVLSATILVEGISQEYRGKKNQVDVAHDRVD 440 (978)
Q Consensus 369 -y~~~l~s~L~~i~~W~ekrL~dYH~~f~~~~~~~me~~~sl-------~~~a~kil~ed~~~~~~~~~~~~~~~~~rid 440 (978)
++++|...-+|+ .=-|..|..+|+.+....++.+-|- ...--|++ | . +.+. -+..-+.
T Consensus 548 rfvklldqlhnsl----ridls~yrnnfpassperlqdlkstvdlltsitffrmkvq-e-l-qspp-------rasqvvk 613 (1283)
T KOG1011|consen 548 RFVKLLDQLHNSL----RIDLSAYRNNFPASSPERLQDLKSTVDLLTSITFFRMKVQ-E-L-QSPP-------RASQVVK 613 (1283)
T ss_pred HHHHHHHHHhhhh----eeeHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH-H-h-cCCC-------hHHHHHH
Confidence 357777666655 4468999999998876544444332 22211211 1 0 0011 1334455
Q ss_pred HHHHhhHHHHHHHHHhhhccccccccCCCCchHHHHHHHHHHHHHHhhhhhccccchhhhcc--hhHHHHHHHHHHHHHh
Q 002030 441 TYIRSSLRTAFAQKLKKVNSSKKLSKNQPNHLPVLSILAQDVTELAFDEKTIFSPILKRWHP--LAAGVAVATLHSCYGN 518 (978)
Q Consensus 441 ~yI~sS~~~af~~~~e~~~~~~~~~~~~~~~~~~L~~LA~~~~~la~~e~~~fSPiL~~whp--~A~~vAa~~Lh~~Yg~ 518 (978)
.++..-+...|.-+-+++-..-..+...-. +--.|..-|-.+.+.+++.|.|.|..+-- ..+-++|-++-++|.+
T Consensus 614 dcvkaclnstye~ifnnchelys~s~~nld---fw~klit~ivsiieedknsytp~lnqfpqelnvgk~saevmw~lfaq 690 (1283)
T KOG1011|consen 614 DCVKACLNSTYEYIFNNCHELYSPSITNLD---FWYKLITLIVSIIEEDKNSYTPALNQFPQELNVGKLSAEVMWSLFAQ 690 (1283)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCccccchh---hHHHHHHHHHHHHHhccccCChhhhhChhhhccccchHHHHHHHHHH
Confidence 555555555555555543222111112222 33334444566777889999999977421 1234788999999999
Q ss_pred hHHHHHhhhhccChhHHhhchhhhHHHHH-----HHHHHhhccccCCCCcccccccCCCchhhhhhHHHHHHHHHHHHHH
Q 002030 519 ELRQFVSGITELTPDAIQVLLAADKLEKN-----LVQIAVEDSVDSEDGGKSIIQEMPPYEAEAAIGNLAKSWINIRVDR 593 (978)
Q Consensus 519 ~Lk~~L~~v~~lt~d~~~vl~aAd~LE~~-----L~~i~~e~s~~~~dggk~~~r~m~PyeiE~~~~~lV~~Wi~~~~~k 593 (978)
|+|--|+.-.+ ...-.+||-...+ |..-|+-|- +. ...-.| +--.+|.|||.+|+++..+.
T Consensus 691 dmk~aleeh~k-----~~~cksadymnl~fkvk~ly~eyv~dl---p~-----~k~~vp-eypawf~pfv~qwldenee~ 756 (1283)
T KOG1011|consen 691 DMKYALEEHAK-----KKLCKSADYMNLHFKVKWLYNEYVADL---PT-----YKSSVP-EYPAWFEPFVMQWLDENEEV 756 (1283)
T ss_pred HHHHHHHHHhh-----hccccCcchhheeeehhhhHHHHHhhc---hh-----hhccCC-CchHHHHHHHHHHhccchHH
Confidence 99987765432 2233444444432 333333221 11 111112 23478999999999999999
Q ss_pred HHHHHHhhhhc---cccccCCCCCCCCccHHHHHHHHHHHHHHHhcCCCCc---cccchHHHHHhHHHHHHHHHHHHHhc
Q 002030 594 LKEWVCRNLQQ---EVWNARANKESIAPSAVEVLRTIDETMEAFFMLPIPM---HSVLLPELISGLDGCLQHYVLKAKSG 667 (978)
Q Consensus 594 i~ewV~raiq~---E~W~P~s~~e~hS~SVVDvFrmi~Etvd~ff~L~~p~---~~~lL~~Ls~Gid~~lq~Y~~~v~~~ 667 (978)
-.+++..|++. |.|..-+.+..||.||||+|.-+|++.+.+.+|+.|. -+.+|+.|+++|.+.+.+|.+.+.
T Consensus 757 s~dflrga~e~dkkdgf~qtseha~fs~svvdvftqlnqsfeiikklecpdp~i~ah~mrrfakti~kvllqyadivs-- 834 (1283)
T KOG1011|consen 757 SMDFLRGALERDKKDGFQQTSEHALFSCSVVDVFTQLNQSFEIIKKLECPDPEIAAHYMRRFAKTINKVLLQYADIVS-- 834 (1283)
T ss_pred HHHHHHhHhhcccccCccccchhhhhcchHHHHHHHHHHHHHHHHHcCCCChHHHHHHHHHHHHHHHHHHHHHHHHHh--
Confidence 99999999975 5788889999999999999999999999999999995 457999999999999999999882
Q ss_pred cCCCCCCCCCCCcccccccCcchhhhhhhccccccccccCcCCCCCCCCCCCcccceeecccHHHHHHHHHHHHHHHHhh
Q 002030 668 CGSRNNFIPTMPALTRCTMGSKFGAFKRKEKLHTAQKRKSQVGTTNGDNSFGVPQLCCRINTFQHIRKELEVLEKKTVHQ 747 (978)
Q Consensus 668 ~gske~~iP~~P~LTR~~~eskf~~~~KKa~~~~~~~e~~~~g~~~~~~s~~~~~LCVrLNnLeyil~qLd~LEk~I~~~ 747 (978)
+.|-++..|. + --|+.+||.+.++.||+++.+.|-.
T Consensus 835 --------------------kdfp~y~~ke---------k--------------lpcilmnnvqqlrvqlekmfeamgg- 870 (1283)
T KOG1011|consen 835 --------------------KDFPKYCHKE---------K--------------LPCILMNNVQQLRVQLEKMFEAMGG- 870 (1283)
T ss_pred --------------------hhhhhhhhhc---------c--------------CCeeeeccHHHHHHHHHHHHHHhcc-
Confidence 2233322221 1 1299999999999999999987643
Q ss_pred hccCCCCCCCCcccchhhhhHHHHHHHHHHHHHHHHHhhhhh------hhcccchhhHh----hhccCccc---cccchh
Q 002030 748 LRSSHSTRTDNITNGIEKRFELSAASSVEAIQQLSEAIAYKV------IFHDLSHVLWD----GLYVGEVS---SSRIEP 814 (978)
Q Consensus 748 w~~~~S~~~~~~~~~~~~~F~~ar~sl~~ai~~l~e~ia~rv------VF~Dl~~~l~d----~LY~g~V~---~~RI~p 814 (978)
..++..+.......+..++..+|.|+.++++.+ ....|.+++.. ++-...|+ ++.++|
T Consensus 871 ---------keld~ea~d~lk~lqvkln~vldels~~f~tsfqphi~e~v~qmg~il~qvkgt~~a~~sva~dad~vl~p 941 (1283)
T KOG1011|consen 871 ---------KELDEEAGDVLKELQVKLNSVLDELSAVFVTSFQPHIHECVIQMGDILVQVKGTGLAKTSVAQDADAVLEP 941 (1283)
T ss_pred ---------hhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCccHHHHHHHHHHHHhhhcccccchhhcccchHHHHHH
Confidence 223446778888999999999999999888764 23455555533 23334443 677999
Q ss_pred hHHHHHHHHHHHHhhhhhhhhHHHHHHHHHHHHHHHHHHH----h-----------------------------------
Q 002030 815 FLQELEHYLEIISSTVHDRVRTRVITDIMKASFEGFLLVL----L----------------------------------- 855 (978)
Q Consensus 815 ~L~~Ld~~L~~l~~~l~d~~r~~vv~~vmkAs~dafL~VL----L----------------------------------- 855 (978)
+++.||.+|...+..+..++-.+|++++||-.+..++.-+ |
T Consensus 942 lmdlldgnlt~fa~~cektvlk~vlkelwkivm~tmek~ivlppltdqt~~~~l~~~ki~~~t~~tq~~f~aak~l~lsk 1021 (1283)
T KOG1011|consen 942 LMDLLDGNLTLFADQCEKTVLKRVLKELWKIVMNTMEKRIVLPPLTDQTLLKQLPNAKIGDVTKLTQTIFQAAKELNLSK 1021 (1283)
T ss_pred HHHHHhchHHHHHHHHHHHHHHHHHHHHHHHHHHhhhheeecCCCcchhHHhccccccccchhhHHHHHHHHHHhcchhh
Confidence 9999999999999999999999999999999987776432 1
Q ss_pred -----CCCCCCCCCccchHHHHHHHHHHHHhcccCCCCCcHHHHHH--HHHhHhhhccccccChHHHHHHHHHHh
Q 002030 856 -----AGGPSRAFTHQDSDIIEEDFKFLCDLFWSNGDGLPADLIDK--FSTSVRSILPLYHNDTESLIEEFKRLT 923 (978)
Q Consensus 856 -----~GGpsR~Fs~~D~~miEeDl~~LKd~F~a~GeGLp~e~Ve~--~a~~v~~Vl~L~~~~Te~LIe~f~~a~ 923 (978)
.....|.++|+++..++-.|..+|+||+|+|.||...++|+ ..+.++..|.||.|.||+||..|.+.-
T Consensus 1022 ~k~hmvree~ksltpkqcavld~aldtikq~fhagg~glkktflekspdlqslryalslytqttd~liktfv~sq 1096 (1283)
T KOG1011|consen 1022 LKDHMVREEEKSLTPKQCAVLDLALDTIKQYFHAGGKGLKKTFLEKSPDLQSLRYALSLYTQTTDQLIKTFVTSQ 1096 (1283)
T ss_pred HHHHHHHHHhccCCccceehhhhhHHHHHHHHhccCcchhhhHhhcCccHHHHHHHHHHHHhHHHHHHHHHHHhh
Confidence 11125899999999999999999999999999999999999 699999999999999999999998765
No 3
>KOG1328 consensus Synaptic vesicle protein BAIAP3, involved in vesicle priming/regulation [Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]
Probab=99.75 E-value=9.6e-15 Score=169.53 Aligned_cols=530 Identities=18% Similarity=0.221 Sum_probs=329.2
Q ss_pred HHHHHHHHHHHHHHHhhcCccchhHHHHHHHHHHHHHHHhhh-h-cCcchHHHHHHHHHHHHHHHHHhhhhhhhhccCCc
Q 002030 322 MLHNLCFGWILFHRYVSTGQVESDLLFAANNLLMEIEKDAKA-A-KDADYSKILSSILNTILDWAGQRLRDYHDIFHDDN 399 (978)
Q Consensus 322 ~lHn~cf~WvlF~qyv~Tgq~e~~LL~aa~~~l~ev~~dak~-~-~d~~y~~~l~s~L~~i~~W~ekrL~dYH~~f~~~~ 399 (978)
.+|-+---|+-|.....|=-.++.+|.. .|++|.+.=.. + -+-..-..|.-.+++....+-.++..--++|+-.|
T Consensus 365 dlhlAm~rw~a~~~~~~s~~ld~s~L~~---lL~di~~~W~~~~qL~~e~E~~LaDs~s~F~e~~l~~~r~hRd~Fpa~n 441 (1103)
T KOG1328|consen 365 DLHLAMCRWLAFHSMIHSIDLDFSLLYK---LLQDIIDKWQPLTQLDKEEEDMLADSFSSFDEYCLRMMREHRDKFPASN 441 (1103)
T ss_pred HHHHHHHHHHHHHHhccCCCCCHHHHHH---HHHHHHHhhcCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCC
Confidence 5788888899999998888888888744 44444332222 2 23333467777888888899999999999999888
Q ss_pred hhhHhHHHHHHHHHhhhhhcchhhhhccccCccccchhhHHHHHHhhHHHHHHHHHhhhccccccccCCCCchHHHHHHH
Q 002030 400 IDSLETVVSLGVLSATILVEGISQEYRGKKNQVDVAHDRVDTYIRSSLRTAFAQKLKKVNSSKKLSKNQPNHLPVLSILA 479 (978)
Q Consensus 400 ~~~me~~~sl~~~a~kil~ed~~~~~~~~~~~~~~~~~rid~yI~sS~~~af~~~~e~~~~~~~~~~~~~~~~~~L~~LA 479 (978)
..+.+-+=++----+ .|.+ +..+...+---..-..-|..-++.+-+--+.++|++..+. +++. -+.++-
T Consensus 442 ~~s~~rle~LlkClg-~L~~--~~~~~~~cPf~~~~~~~~~~al~kg~~~w~dr~~~~~q~~-------~~p~-l~~~~~ 510 (1103)
T KOG1328|consen 442 RNSGERLESLLKCLG-ALRE--SPFYQKYCPFKRPFHAHLESALVKGAEDWIDRSIESVQDP-------DPPK-LLLQLL 510 (1103)
T ss_pred CchHHHHHHHHHHHH-HHhc--CcchHhhCCCCccchHHHHHHHHhhhHHHHHHHHhccCCC-------CCch-hHHHHH
Confidence 775444444321122 2333 2222211100011244677777777777789999866543 2222 122222
Q ss_pred HHHHHHHhh------------hhhccccchhhhcchhHHHHHHHHHHHHHhhHHHHHhhhhccChhHHhhch-hhhHHHH
Q 002030 480 QDVTELAFD------------EKTIFSPILKRWHPLAAGVAVATLHSCYGNELRQFVSGITELTPDAIQVLL-AADKLEK 546 (978)
Q Consensus 480 ~~~~~la~~------------e~~~fSPiL~~whp~A~~vAa~~Lh~~Yg~~Lk~~L~~v~~lt~d~~~vl~-aAd~LE~ 546 (978)
.-+.++-.. -++.|+=+|+.+--.-+ -.+...--.+=|..++.-..+++ .+..+ ..+-+|.
T Consensus 511 ~i~~d~q~~~~~Yaalf~~v~~idyf~lt~~q~drlv~----Ee~~s~~~~~~~~~~~sq~~ls~--~~~~pv~~~lfeL 584 (1103)
T KOG1328|consen 511 NIVNDQQSRFLHYAALFREVARIDYFQLTLNQFDRLVT----EELTSELMSEKKMDLKSQMRLSA--AQDPPVEDDLFEL 584 (1103)
T ss_pred HHHHHHHHHHHHHHHHHHHhhccceeeeeHHHHHHHHH----HHHHHHHhchhhhhhhhhhhccc--ccCCCccccHHHH
Confidence 222222111 11244444433331111 11111111111122222222221 11122 2334566
Q ss_pred HHHHHH-hhccccCCCCcccccccCCCchhhhhhHHHHHHHHHHHHHHHHHHHHhhhhccccccCCCCCCCCccHHHHHH
Q 002030 547 NLVQIA-VEDSVDSEDGGKSIIQEMPPYEAEAAIGNLAKSWINIRVDRLKEWVCRNLQQEVWNARANKESIAPSAVEVLR 625 (978)
Q Consensus 547 ~L~~i~-~e~s~~~~dggk~~~r~m~PyeiE~~~~~lV~~Wi~~~~~ki~ewV~raiq~E~W~P~s~~e~hS~SVVDvFr 625 (978)
||.-+. +|-- +.--+. -.|.+--=+...+|.|-|+.|++-..+|..-=|.-|++-|.=.|.+...|||+|.+|+=.
T Consensus 585 ~l~l~~f~~l~-~~~~a~--~~r~lals~~ha~F~p~ik~w~~V~k~kAl~Rv~~a~~mD~~~~~~~~~RhSSS~~d~~~ 661 (1103)
T KOG1328|consen 585 MLILMAFVELR-NYRLAN--RVRVLALSEWHAIFNPGIKKWLEVAKEKALARVHLACQMDMPISTSSDMRHSSSHIDICH 661 (1103)
T ss_pred HHHHHHHHHHH-hhcccC--CCcchhhhcchhhhhHHHHHHHHHHHHHHHHHHHHHhccCCccccchhhccccchhhHHH
Confidence 644221 1100 000000 011122224567899999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhcCCCCccc---cchHHHHHhHHHHHHHHHHHHHhccCCCCCCCCCCCcccccccCcchhhhhhhcccccc
Q 002030 626 TIDETMEAFFMLPIPMHS---VLLPELISGLDGCLQHYVLKAKSGCGSRNNFIPTMPALTRCTMGSKFGAFKRKEKLHTA 702 (978)
Q Consensus 626 mi~Etvd~ff~L~~p~~~---~lL~~Ls~Gid~~lq~Y~~~v~~~~gske~~iP~~P~LTR~~~eskf~~~~KKa~~~~~ 702 (978)
++.+.-+.-..|.||+.. .+=+-|.+-+..+.-.||+.+....+..+.+ ..| .|++
T Consensus 662 ~l~~i~efW~rl~wpD~~~ai~~~~QL~dvVCea~~~Yt~li~sa~~dtq~~-------------~a~-------~p~~- 720 (1103)
T KOG1328|consen 662 ILEQITEFWERLDWPDAGLAIEYTRQLVDVVCEAVTVYTQLIISAEGDTQEL-------------QAF-------IPSQ- 720 (1103)
T ss_pred HHHHHHHHHHHcCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccchh-------------hhc-------ChHH-
Confidence 999999999999999633 3446788888999999999986544433322 111 0110
Q ss_pred ccccCcCCCCCCCCCCCcccceeecccHHHHHHHHHHHHHHHHhhhccCCCCCCCCc--ccchhhhhHHHHHHHHHHHHH
Q 002030 703 QKRKSQVGTTNGDNSFGVPQLCCRINTFQHIRKELEVLEKKTVHQLRSSHSTRTDNI--TNGIEKRFELSAASSVEAIQQ 780 (978)
Q Consensus 703 ~~e~~~~g~~~~~~s~~~~~LCVrLNnLeyil~qLd~LEk~I~~~w~~~~S~~~~~~--~~~~~~~F~~ar~sl~~ai~~ 780 (978)
-.--+||-+||.||.+.-++.-+|.. -|.. |...++. ...+....+..-.-+.+-|+.
T Consensus 721 ----------------~s~~lCv~iNNvE~VRrsl~~~~k~~--~~p~--~~~~~~~~l~~~~~n~les~~~~~~~e~~r 780 (1103)
T KOG1328|consen 721 ----------------LSHLLCVAINNVEQVRRSLNITEKLH--MDPR--SRLNGNHMLKSEIENRLESCESNICSEIDR 780 (1103)
T ss_pred ----------------HHHHHHHHHccHHHHHHHHhHHhhhc--cCcc--cccCccccCchHHHHHHHHHHHHHHHHHHH
Confidence 11257999999999999998887753 2332 2112221 113333334444444444555
Q ss_pred HHHHhhhhhhhcccchhhHhhhccCc--cccccchhhHHHHHHHHHHHHhhhhhhhhHHHHHHHHHHHHHHHHHHHhCCC
Q 002030 781 LSEAIAYKVIFHDLSHVLWDGLYVGE--VSSSRIEPFLQELEHYLEIISSTVHDRVRTRVITDIMKASFEGFLLVLLAGG 858 (978)
Q Consensus 781 l~e~ia~rvVF~Dl~~~l~d~LY~g~--V~~~RI~p~L~~Ld~~L~~l~~~l~d~~r~~vv~~vmkAs~dafL~VLL~GG 858 (978)
+.-..+-|++ -||+...++.-...+ ..+.-|-|+++|||-.|..+..++..+...|++..+|+-.+..++. .-|
T Consensus 781 i~~~Lt~~m~-~~~~K~vfHlawSPds~~~~~a~~PL~~yLD~~La~ln~~Ll~~Nf~Rvl~a~w~~vl~~l~~---~~g 856 (1103)
T KOG1328|consen 781 IVGLLTERML-PQMKKHVFHLAWSPDSQLVEDALKPLTDYLDIELASLNKNLLHRNFLRVLSAQWSIVLKLLRE---CVG 856 (1103)
T ss_pred HHHHhhHHhh-HHHHHHHHheecCccccchhhhHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHH---Hhc
Confidence 5444444433 255433333222222 2356799999999999999999999999999999999999888744 345
Q ss_pred CCCCCCccchHHHHHHHHHHHHhcccCCCCCcHHHHHH-HHHhHhhhccccccChHHHHHHH
Q 002030 859 PSRAFTHQDSDIIEEDFKFLCDLFWSNGDGLPADLIDK-FSTSVRSILPLYHNDTESLIEEF 919 (978)
Q Consensus 859 psR~Fs~~D~~miEeDl~~LKd~F~a~GeGLp~e~Ve~-~a~~v~~Vl~L~~~~Te~LIe~f 919 (978)
-.+-..+.=+.-+.+-+..|-+||+|+|+||+.|-++. -.-.+.++|.|...+|++|||+|
T Consensus 857 ~n~d~~~~Fy~Rl~eal~~Lv~FFHAeGqGL~le~L~t~~~~rl~~~L~lhkt~T~~lIe~f 918 (1103)
T KOG1328|consen 857 ENVDMEPAFYHRLFEALHVLVEFFHAEGQGLSLEALDTNPEHRLVKILSLHKTPTEQLIEKF 918 (1103)
T ss_pred ccCCCChHHHHHHHHHHHHHHHHHhccCCCcchHhhccCcHHHHHHHHHhcCCCHHHHHHHH
Confidence 55555555577888999999999999999999999888 47779999999999999999998
No 4
>PF10540 Membr_traf_MHD: Munc13 (mammalian uncoordinated) homology domain; InterPro: IPR019558 Mammalian uncoordinated homology 13 (Munc13) proteins constitute a family of three highly homologous molecules (Munc13-1, Munc13-2 and Munc13-3) with homology to Caenorhabditis elegans unc-13p. Munc13 proteins contain a phorbol ester-binding C1 domain and two C2 domains, which are Ca2+/phospholipid binding domains. Sequence analyses have uncovered two regions called Munc13 homology domains 1 (MHD1) and 2 (MHD2) that are arranged between two flanking C2 domains. MHD1 and MHD2 domains are present in a wide variety of proteins from Arabidopsis thaliana (Mouse-ear cress), C. elegans, Drosophila melanogaster (Fruit fly), Mus musculus (Mouse), Rattus norvegicus (Rat) and Homo sapiens (Human), some of which may function in a Munc13-like manner to regulate membrane trafficking. The MHD1 and MHD2 domains are predicted to be alpha-helical. ; PDB: 3SWH_A.
Probab=99.68 E-value=7.3e-17 Score=159.59 Aligned_cols=110 Identities=35% Similarity=0.586 Sum_probs=80.1
Q ss_pred ccchhhHHHHHHHHHHHHhhhhhhhhHHHHHHHHHHHHHHHHHHH-h---C--------------------CCCCCCCCc
Q 002030 810 SRIEPFLQELEHYLEIISSTVHDRVRTRVITDIMKASFEGFLLVL-L---A--------------------GGPSRAFTH 865 (978)
Q Consensus 810 ~RI~p~L~~Ld~~L~~l~~~l~d~~r~~vv~~vmkAs~dafL~VL-L---~--------------------GGpsR~Fs~ 865 (978)
..|.|+++|||.+|.++++.+.+.+..+|++++|+.++..+.-.+ + . +|..|..++
T Consensus 2 ~ai~PL~dyLd~nL~~L~~~L~~~~f~~vl~~lW~~vl~~l~~llvlP~ls~~~~~~~~~~~~~~~~~~~~~~~~~~Lt~ 81 (137)
T PF10540_consen 2 DAIEPLMDYLDSNLSILASNLEKENFKRVLKELWKVVLETLEELLVLPPLSDKPMLGLLQSAVSSLSSHGIGGSQRPLTP 81 (137)
T ss_dssp HHHHHHHHHHCHHHHHHHHHS-HHHHHHHHHHHHHHHHHHHHHHTTS-G------------GG-TTS-------------
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcchhHHHHHHHHHHHHHHhhcccccCCCCCH
Confidence 358999999999999999999999999999999999977777666 3 2 366799999
Q ss_pred cchHHHHHHHHHHHHhcccCCCCCcHHHHHH--HHHhHhhhccccccChHHHHHHH
Q 002030 866 QDSDIIEEDFKFLCDLFWSNGDGLPADLIDK--FSTSVRSILPLYHNDTESLIEEF 919 (978)
Q Consensus 866 ~D~~miEeDl~~LKd~F~a~GeGLp~e~Ve~--~a~~v~~Vl~L~~~~Te~LIe~f 919 (978)
.+++.++.+++.|++||||+|+|||.+.+|+ ++..++.++.||+++|++||++|
T Consensus 82 ~q~~~l~~~L~~L~~FFhA~G~Gl~~~~L~ks~~yq~L~~~l~ly~~sT~~LI~~f 137 (137)
T PF10540_consen 82 KQCDRLFKWLDTLKDFFHAEGNGLPLEFLEKSPEYQSLRYILSLYDQSTDELIEEF 137 (137)
T ss_dssp TCHHHHHHHHHHHHHHHHCCCTS--HHHHHC-HHHHHHHHHHHHT-----------
T ss_pred HHHHHHHHHHHHHHHHHhCCCCCCCHHHHccCHHHHHHHHHHHHhcCCHHHHHhhC
Confidence 9999999999999999999999999999944 79999999999999999999987
No 5
>PF06046 Sec6: Exocyst complex component Sec6; InterPro: IPR010326 Sec6 is a component of the multiprotein exocyst complex. Sec6 interacts with Sec8, Sec10 and Exo70.These exocyst proteins localise to regions of active exocytosis-at the growing ends of interphase cells and in the medial region of cells undergoing cytokinesis-in an F-actin-dependent and exocytosis- independent manner [].; PDB: 2FJI_2.
Probab=98.90 E-value=1.8e-08 Score=120.41 Aligned_cols=438 Identities=17% Similarity=0.260 Sum_probs=212.3
Q ss_pred hhhHHHHHHhhHHHHHHHHHhhhccccccccCCCCchHHHHHHHHHHHHHHhhhhhccccchhhhcchhHHHHHHHHHHH
Q 002030 436 HDRVDTYIRSSLRTAFAQKLKKVNSSKKLSKNQPNHLPVLSILAQDVTELAFDEKTIFSPILKRWHPLAAGVAVATLHSC 515 (978)
Q Consensus 436 ~~rid~yI~sS~~~af~~~~e~~~~~~~~~~~~~~~~~~L~~LA~~~~~la~~e~~~fSPiL~~whp~A~~vAa~~Lh~~ 515 (978)
+.++-.-|+.|+...|.+..+...... ........|-.+-+|+...-..-...|-| .|+ +-. .-+...|++
T Consensus 79 r~~~~~~l~~sv~~~~~~~~~~~~~~~----~l~~~l~~l~~~~~DL~~v~~~~~~cfPp---~~~-I~~-~y~~~YH~~ 149 (566)
T PF06046_consen 79 RQKFFEALRESVEERFEQAEEREENKS----WLARHLEALRWVLEDLQVVKDDVVPCFPP---EYD-IFN-TYVSMYHNA 149 (566)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHHHHHHHHHHHHHHHhhhhccCch----HHHHHHHHHHHHHHHHHHHHHhCcccCCC---CCh-HHH-HHHHHHHHH
Confidence 345666677788887774444333221 01111222223444444432222233444 255 333 333456666
Q ss_pred HHhhHHHHHhhhhccC-hhHHhhchhhhHHHHHHHHHHhhccccCCCCcccccccCCCchhhhhhHHHHHHHHHHHHHHH
Q 002030 516 YGNELRQFVSGITELT-PDAIQVLLAADKLEKNLVQIAVEDSVDSEDGGKSIIQEMPPYEAEAAIGNLAKSWINIRVDRL 594 (978)
Q Consensus 516 Yg~~Lk~~L~~v~~lt-~d~~~vl~aAd~LE~~L~~i~~e~s~~~~dggk~~~r~m~PyeiE~~~~~lV~~Wi~~~~~ki 594 (978)
++..|+.+... .+. .+...+|.= ++.|.. -+..++.. . ...+.|.=.++....++..++.....++
T Consensus 150 l~~~l~~l~~~--~l~~~~ll~ll~W--------~~~Y~~-~m~~~~l~-~-~~~l~plL~~~~~~~L~~~Yl~~~~~~~ 216 (566)
T PF06046_consen 150 LSDHLQELISP--DLEANDLLSLLSW--------VNTYPS-IMGHPDLA-I-KEQLGPLLPDEKLEELEDDYLSRIQKKM 216 (566)
T ss_dssp -------------------------------------------------------------HHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHccC--CCCHHHHhhheec--------hhhChH-hhcCCccc-c-hhhccCCCChhHHHHHHHHHHHHHHHHH
Confidence 66665554111 122 222322221 222322 11122211 1 2345566667788999999999999999
Q ss_pred HHHHHhhhhccc--c----ccC-C-CCCCCCccHHHHHHHHHHHHHHHhcCCCCccccchHHHHHhHHHHHHHHHHHHHh
Q 002030 595 KEWVCRNLQQEV--W----NAR-A-NKESIAPSAVEVLRTIDETMEAFFMLPIPMHSVLLPELISGLDGCLQHYVLKAKS 666 (978)
Q Consensus 595 ~ewV~raiq~E~--W----~P~-s-~~e~hS~SVVDvFrmi~Etvd~ff~L~~p~~~~lL~~Ls~Gid~~lq~Y~~~v~~ 666 (978)
.+|+++++++|. | .|. + +...|++..+|||+|++|.++.. .=.....++....+.+.+.+..|-..+..
T Consensus 217 ~eW~~n~l~~E~~~w~~~~~Pe~~~dg~y~t~~~~difqmi~qql~va---~~~l~~~v~~~v~~~~~~~l~~~~~~~~~ 293 (566)
T PF06046_consen 217 KEWMDNILEQEVKDWSEEKEPEEDEDGYYHTPLPVDIFQMINQQLDVA---SESLQGKVLQRVLEELANFLKSYQDAWQE 293 (566)
T ss_dssp HHHHHHHHHHHHHHHHC-S--EE-TTS-EE-HHHHHHHHHHHHHHHHH---HHTT-HHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhcccCCCCcCCCCCeecCcHHHHHHHHHHHHHHH---HhhhhhhHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999984 4 444 2 23368889999999999999998 11134566677777777777777776632
Q ss_pred ccCCCCCCCCCCCcccccccCcchhhhhhhcccccc-ccccCcCCCCCCCCCCCcccceeecccHHHHHHHHHHHHHHHH
Q 002030 667 GCGSRNNFIPTMPALTRCTMGSKFGAFKRKEKLHTA-QKRKSQVGTTNGDNSFGVPQLCCRINTFQHIRKELEVLEKKTV 745 (978)
Q Consensus 667 ~~gske~~iP~~P~LTR~~~eskf~~~~KKa~~~~~-~~e~~~~g~~~~~~s~~~~~LCVrLNnLeyil~qLd~LEk~I~ 745 (978)
.+ +..+ ++. ++. +.+ ....+.+.+|.-+||-......++.++..+.
T Consensus 294 ~~------------------~~~~----~~~--~~~~~~~---------~~~~~~eyliA~~N~~~~~~~~~~~l~~~~~ 340 (566)
T PF06046_consen 294 FK------------------EEHF----KDR--SSVKPKE---------NPPGYLEYLIAVANNCLRCRDYVESLEQKFE 340 (566)
T ss_dssp HH------------------HHHH----HHH--HHHHHCC-----------S-HHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HH------------------HHHH----Hhh--hcccccc---------cccchHHHHHHHhccHHHHHHHHHHHHHhcc
Confidence 11 0011 110 000 000 1122566889999999999999999988765
Q ss_pred hhhccCCCCCCCCcccchhhhhHHHHHHHHHHHHHHHHHhhhhhhhcccchhhHhhhccCc-cccccchhhHHHHHHHHH
Q 002030 746 HQLRSSHSTRTDNITNGIEKRFELSAASSVEAIQQLSEAIAYKVIFHDLSHVLWDGLYVGE-VSSSRIEPFLQELEHYLE 824 (978)
Q Consensus 746 ~~w~~~~S~~~~~~~~~~~~~F~~ar~sl~~ai~~l~e~ia~rvVF~Dl~~~l~d~LY~g~-V~~~RI~p~L~~Ld~~L~ 824 (978)
...... ....+...|+.+.....+...+-|.++.. .||.|+...| ..|+... ..+.-++.++..++.++.
T Consensus 341 ~~~~~~-------~~~~~~~~~~~~~~~~~~l~~~~~~~L~~-~if~Dl~p~~-~~Lft~~W~~~~~~~~I~~Ti~dY~~ 411 (566)
T PF06046_consen 341 EKVSQK-------YMERISSDLEELMDGFDDLAKECCQYLLE-EIFNDLKPHF-KKLFTKKWYSGEAVDTICATIEDYLQ 411 (566)
T ss_dssp TTS-HH-------HHHHHHHHHCTTHHHHHHHHHHHHHHHHH-HHHHCTHHHH-CTTTSGGGCTS-HHHHHHHHHHHHHH
T ss_pred cccchH-------HHhhhhhhHHHHHHHHHHHHHHHHHHHHH-HHHHHhHHHH-HHhCcCcCcCcchHHHHHHHHHHHHH
Confidence 432210 01123334444444444444443333332 3788987555 4444322 223667899999999999
Q ss_pred HHHhhhhhhhhHHHHHHHHHHHHHHHHHHHhCCCCC---CCCCccchHHHHHHHHHHHHhcccCCCCCcHHHHHHHHHhH
Q 002030 825 IISSTVHDRVRTRVITDIMKASFEGFLLVLLAGGPS---RAFTHQDSDIIEEDFKFLCDLFWSNGDGLPADLIDKFSTSV 901 (978)
Q Consensus 825 ~l~~~l~d~~r~~vv~~vmkAs~dafL~VLL~GGps---R~Fs~~D~~miEeDl~~LKd~F~a~GeGLp~e~Ve~~a~~v 901 (978)
-+...+.+.....++.++...++-.++.-|+-+..+ +.=..+=.+-|..|.+.|++||-.-| ..+.+......+
T Consensus 412 d~~~~l~~~~~~~l~~~~~~~~v~~Yl~~l~~kk~~~~~~~~~~~~a~~i~~D~~~l~~~F~~~~---~~~~~~~~~~~l 488 (566)
T PF06046_consen 412 DFQHYLRPPYFQELIEELHDRVVKEYLRALMKKKIKFKNKEERKEAAERIRRDAEQLKSFFSKLG---SKSEVKSSFDVL 488 (566)
T ss_dssp HHCCCS-HHHHHHHHHHHHHHHHHHHHHGGGG---------CCCCCHHHHHHHHHHHHHHHHHHT---HHHHHHHHHHHH
T ss_pred HHHHhccccHHHHHHHHHHHHHHHHHHHHHHHhhhhcccHHHHHHHHHHHHHHHHHHHHHHHHhc---ccccccchHHHH
Confidence 999999999999999999999999999999997743 23334447899999999999999888 788888899999
Q ss_pred hhhcccc-ccChHHHHHHHHHHhhhhcCCCCCccCCCCCCCCCCCCCCccceeeeccccCc
Q 002030 902 RSILPLY-HNDTESLIEEFKRLTLESYGSSAKSRLPLPPTSGQWNPTEPNTVLRVLCYRSD 961 (978)
Q Consensus 902 ~~Vl~L~-~~~Te~LIe~f~~a~~~~~g~~~~s~~p~ppt~~~w~~~d~nTiLRVLchR~D 961 (978)
..++.++ ..+++.+...+.... . .+ .--..+-|..||.-|.|
T Consensus 489 ~~l~~ll~~~d~~~i~l~~~~l~-~--------~y---------pD~~~~~v~alL~~R~D 531 (566)
T PF06046_consen 489 EDLLELLRLEDPEMIKLEVSSLL-Q--------KY---------PDISEEHVEALLALRGD 531 (566)
T ss_dssp HHHHHHH-HS-CCCHHHHHHHHH-C--------C----------TT--SHHHHHHHCT-TT
T ss_pred HHHHHHHhcCCHHHHHHHHHHHH-H--------hC---------CCCCHHHHHHHHHhccC
Confidence 9999988 777777766666665 1 11 11345578888988875
No 6
>KOG2180 consensus Late Golgi protein sorting complex, subunit Vps53 [Intracellular trafficking, secretion, and vesicular transport]
Probab=97.97 E-value=0.021 Score=69.14 Aligned_cols=521 Identities=16% Similarity=0.189 Sum_probs=275.8
Q ss_pred HHHHHHHHHHhhcCccchhHHHHHHHHHHHHHHHhhhhcCcchHHHHHHHHHHHHHHH-HHhhhhhhhhccCCchh----
Q 002030 327 CFGWILFHRYVSTGQVESDLLFAANNLLMEIEKDAKAAKDADYSKILSSILNTILDWA-GQRLRDYHDIFHDDNID---- 401 (978)
Q Consensus 327 cf~WvlF~qyv~Tgq~e~~LL~aa~~~l~ev~~dak~~~d~~y~~~l~s~L~~i~~W~-ekrL~dYH~~f~~~~~~---- 401 (978)
|-+|+==++| |++ ..+|.|..++++- -++ =++-.-..-|+.-++.++.=. .+-..||-..|+.|+..
T Consensus 139 L~~l~~kr~y---~e~-a~~lqai~~ll~~--F~~--Yk~v~~I~~Ls~si~~~k~~l~~qi~~df~~~F~~~~~~~~~~ 210 (793)
T KOG2180|consen 139 LNALLSKRSY---GEA-ASPLQAILQLLNH--FIA--YKSVDEIANLSESIDKLKKSLLSQIFQDFKAAFSGGETHEEAL 210 (793)
T ss_pred HHHHHhhccH---HHH-HhHHHHHHHHHHH--HHH--hcchHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCcc
Confidence 5566666666 443 4566666666652 223 122223355666677776544 45568999999998862
Q ss_pred hHhHHHHHHHHHhhhhhcchhhhhccccCccccchhhHHHHHHhhHHHHHHHHHhh-hccccccccCCCCchHHHHHHHH
Q 002030 402 SLETVVSLGVLSATILVEGISQEYRGKKNQVDVAHDRVDTYIRSSLRTAFAQKLKK-VNSSKKLSKNQPNHLPVLSILAQ 480 (978)
Q Consensus 402 ~me~~~sl~~~a~kil~ed~~~~~~~~~~~~~~~~~rid~yI~sS~~~af~~~~e~-~~~~~~~~~~~~~~~~~L~~LA~ 480 (978)
.|+.+-. +++++ |+- +.++-..-|+-||.-=+.. |.++-+. .+... .++-.-.-+.+
T Consensus 211 ~l~~l~d----aC~v~--d~l--------epsvreelIkwf~~qqL~e-y~~IF~en~E~a~-----LDkidrRY~wf-- 268 (793)
T KOG2180|consen 211 LLQKLSD----ACLVV--DAL--------EPSVREELIKWFCSQQLEE-YEQIFRENEEAAS-----LDKLDRRYAWF-- 268 (793)
T ss_pred HHHHHHH----HHHHH--HHh--------CCccHHHHHHHHHHHHHHH-HHHHHhccHhhhh-----hhhHHHHHHHH--
Confidence 1222211 11111 000 0123455666666543322 3333322 12111 22222222222
Q ss_pred HHHHHHhhhhhccccchhh-hcchhHHHHHHHHHHHHHhhHHHHHhhhhc-cC-hhHHhhchhhhHHHHHHHHHHhhccc
Q 002030 481 DVTELAFDEKTIFSPILKR-WHPLAAGVAVATLHSCYGNELRQFVSGITE-LT-PDAIQVLLAADKLEKNLVQIAVEDSV 557 (978)
Q Consensus 481 ~~~~la~~e~~~fSPiL~~-whp~A~~vAa~~Lh~~Yg~~Lk~~L~~v~~-lt-~d~~~vl~aAd~LE~~L~~i~~e~s~ 557 (978)
-+.|-..| +.|-|+|=. || .|...+. .++.-=-++|.+.|++..+ ++ .=.+-.|+..-.+|++|-.-...+..
T Consensus 269 -Kr~L~~fe-~k~~~iFP~dW~-v~~RLt~-eFc~~Tr~~L~~Il~~~~~~~~v~lll~Alq~TleFE~~L~kRF~g~~~ 344 (793)
T KOG2180|consen 269 -KRLLRDFE-EKWKPIFPADWH-VAYRLTI-EFCHQTRKQLESILKRRKKEPDVKLLLFALQSTLEFEKFLDKRFSGGTL 344 (793)
T ss_pred -HHHHHHHH-HhccccCCcccc-hhHHHHH-HHHHHHHHHHHHHHHHhhhCccHHHHHHHHHHHHHHHHHHHHHhcCCCC
Confidence 24444445 678888755 99 8877774 4444466888888888653 33 33344567778899998755421111
Q ss_pred cC--CCCcccccccCCCc--hhhhhhHHHHHHHHHHHHHHHHHHHHhhhhccccc--cCCCCCCC---CccHHHHHHHHH
Q 002030 558 DS--EDGGKSIIQEMPPY--EAEAAIGNLAKSWINIRVDRLKEWVCRNLQQEVWN--ARANKESI---APSAVEVLRTID 628 (978)
Q Consensus 558 ~~--~dggk~~~r~m~Py--eiE~~~~~lV~~Wi~~~~~ki~ewV~raiq~E~W~--P~s~~e~h---S~SVVDvFrmi~ 628 (978)
.. +++++-.-.+-++| .|-+.|.|++.-||+.+...+.+-+++-.+.++|. |.++.+-+ =+|-.|+|+.-+
T Consensus 345 ~~~~~~ns~~~~k~~~~f~~~isScFEPhLtlyI~~qek~l~ellek~v~e~~~~~~p~~~~~~~s~vlpSsadlF~~Yk 424 (793)
T KOG2180|consen 345 TGKPEKNSQFEPKERFNFEGAISSCFEPHLTLYIESQEKELSELLEKFVSEEKWDGEPKSNTDEESLVLPSSADLFVAYK 424 (793)
T ss_pred CCCCccccccccccccchhhHHHHhcccchhhhhhHHHHHHHHHHHHHHhhhccCCCCCCCcccccccCccHHHHHHHHH
Confidence 00 11111111122454 47789999999999999999999999999999997 65533322 367789999999
Q ss_pred HHHHHHhcCCCCccccchHHHHHhHHHHHHHHHHHHHhccCCCCCCCCCCCcccccccCcc-hhhhhh--hccccccccc
Q 002030 629 ETMEAFFMLPIPMHSVLLPELISGLDGCLQHYVLKAKSGCGSRNNFIPTMPALTRCTMGSK-FGAFKR--KEKLHTAQKR 705 (978)
Q Consensus 629 Etvd~ff~L~~p~~~~lL~~Ls~Gid~~lq~Y~~~v~~~~gske~~iP~~P~LTR~~~esk-f~~~~K--Ka~~~~~~~e 705 (978)
.++-++.+|-=.. +=|-++..-+.+.++.|..++.. |.+|..|-..-+.. +.. .+ ++.-|
T Consensus 425 kcltq~~~Ls~n~--dpl~~~~~~f~k~LreYa~kil~---------~~lP~~t~~s~g~~v~~l-~~~e~~~~~----- 487 (793)
T KOG2180|consen 425 KCLTQCSELSENN--DPLIALLAVFSKWLREYAQKILL---------GNLPDTTSSSDGAAVYLL-LRIEGAEYC----- 487 (793)
T ss_pred HHHHHHHHhccCC--chHHHHHHHHHHHHHHHHHHHhh---------ccCCcccccccCchhhhH-HHhhhhhhh-----
Confidence 9999999996332 33334444888999999999865 33565554332211 111 12 11111
Q ss_pred cCcCCCCCCCCCCCcc---cceeecccHHHHHHHHHHHHHHHHhhhccCCCCCCCCcccchhhhhHHHHHHHHHHHHHHH
Q 002030 706 KSQVGTTNGDNSFGVP---QLCCRINTFQHIRKELEVLEKKTVHQLRSSHSTRTDNITNGIEKRFELSAASSVEAIQQLS 782 (978)
Q Consensus 706 ~~~~g~~~~~~s~~~~---~LCVrLNnLeyil~qLd~LEk~I~~~w~~~~S~~~~~~~~~~~~~F~~ar~sl~~ai~~l~ 782 (978)
.++.. ..|.+||+.+|+...--.+|+++.+...... .+ ...|...+...-.-+-..-
T Consensus 488 -----------~~t~d~l~di~~~lst~e~~~~tt~qle~kl~e~~~~~~-------~~--~vs~s~~r~~~~~~~~~s~ 547 (793)
T KOG2180|consen 488 -----------RFTIDQLLDICCILSTAEYCLATTIQLEKKLKEIVDASY-------IK--GVSFSEEREVFSSKISVSL 547 (793)
T ss_pred -----------cccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-------hh--hcchHHHHHHHHHHHhhhH
Confidence 11112 4599999999999999999988665322110 00 1122222221111111111
Q ss_pred HHhh---hhhhhcccc---hhhHhhhccCccccccchhhHHHHHHHHHHHHhhhhhhhh-HHH-HHHHHHHHHHHHHHHH
Q 002030 783 EAIA---YKVIFHDLS---HVLWDGLYVGEVSSSRIEPFLQELEHYLEIISSTVHDRVR-TRV-ITDIMKASFEGFLLVL 854 (978)
Q Consensus 783 e~ia---~rvVF~Dl~---~~l~d~LY~g~V~~~RI~p~L~~Ld~~L~~l~~~l~d~~r-~~v-v~~vmkAs~dafL~VL 854 (978)
.++. ++..+-|+. ..-|.+|= +|.+ =++.+..+..|+.+....+.+.+- ++. .+.-|-++..+|..--
T Consensus 548 q~lv~D~e~a~~~~lt~msk~~~~~l~--~vgD--Qss~v~s~~~h~~q~~~~i~~~~~~~r~~f~~fc~r~a~~f~~kf 623 (793)
T KOG2180|consen 548 QFLVQDLENALDPDLTPMSKMQWQNLE--GVGD--QSSYVSSLNFHLSQFVPLIRDALALDRKYFAQFCVRLAASFIPKF 623 (793)
T ss_pred HHHHHHHHHhhCcccChHHHHHHHHhc--Cccc--cchhhHHHHHHHHhhhHHHHHHhccccchHHHhhHHHHhhcchHH
Confidence 1111 111222221 11133322 2221 134555555666555555555543 222 3333333333332222
Q ss_pred hCCCCCCCCCccc--hHHHHHHHHHHHHhcccCCCC--C----c--HHHHHHHHHhHhhhcc-cc--ccChHHHHHHHHH
Q 002030 855 LAGGPSRAFTHQD--SDIIEEDFKFLCDLFWSNGDG--L----P--ADLIDKFSTSVRSILP-LY--HNDTESLIEEFKR 921 (978)
Q Consensus 855 L~GGpsR~Fs~~D--~~miEeDl~~LKd~F~a~GeG--L----p--~e~Ve~~a~~v~~Vl~-L~--~~~Te~LIe~f~~ 921 (978)
++ +-.|++...- .+-+--|..+||++|+..|+= + + ...|++....++-|+. || -.+.+.-+|.|..
T Consensus 624 ~~-~l~R~k~~s~~g~EQLlldt~slK~~ll~lp~~~s~~n~~~~y~~~~~~~m~~~e~iiK~lm~p~~~~~~f~e~yik 702 (793)
T KOG2180|consen 624 LN-VLFRAKPISVVGAEQLLLDTESLKDALLTLPPLRSLFNDKRPYKRHVDNNMTQAEMIIKVLMTPLDPADDFYEQYIK 702 (793)
T ss_pred HH-HHHHhhhHhhhHHHHHHHHHHHHHHHhhcCCchhhhccccchHHHHHHHHHHHHHHHHHHHhCCCCchHHHHHHHHH
Confidence 21 2234444322 334556899999999888742 1 1 1234554555555555 33 3456777777766
Q ss_pred Hh
Q 002030 922 LT 923 (978)
Q Consensus 922 a~ 923 (978)
+.
T Consensus 703 L~ 704 (793)
T KOG2180|consen 703 LL 704 (793)
T ss_pred hc
Confidence 65
No 7
>KOG2286 consensus Exocyst complex subunit SEC6 [Intracellular trafficking, secretion, and vesicular transport]
Probab=96.94 E-value=1.9 Score=53.55 Aligned_cols=350 Identities=17% Similarity=0.223 Sum_probs=203.2
Q ss_pred HHHHHHhhHHHHHhhhhccChhHHhhchh---hh-HHHHHHHHHHhhccccCCCCcccccccCCCchhhhhhHHHHHHHH
Q 002030 512 LHSCYGNELRQFVSGITELTPDAIQVLLA---AD-KLEKNLVQIAVEDSVDSEDGGKSIIQEMPPYEAEAAIGNLAKSWI 587 (978)
Q Consensus 512 Lh~~Yg~~Lk~~L~~v~~lt~d~~~vl~a---Ad-~LE~~L~~i~~e~s~~~~dggk~~~r~m~PyeiE~~~~~lV~~Wi 587 (978)
.-+.|.+.|..++.++.+.-+++.+.++= .- ..+..+.+..+++. +..-|-=-.+-+..++....
T Consensus 271 ~l~~Yh~~ls~ll~dl~s~~l~~~eil~llawV~~~~~~~~l~~~~~~~-----------~~l~p~l~~~~v~~Ll~~Y~ 339 (667)
T KOG2286|consen 271 YLELYHQALSDLLRDLASEALELREILQLLAWVRNEYYTPLLQLNVDVL-----------RALGPLLRPKHVVALLDLYL 339 (667)
T ss_pred HHHHHHHHHHHHHHHHhhccccHHHHHHHHHHHHHHhcChhhhccchhh-----------hhhcCccChhHHHHHHHHHH
Confidence 34458888888888887766555544321 11 11111222211111 11122212245556666667
Q ss_pred HHHHHHHHHHHHhhhhcc--ccccCC----CCC--CCCccHHHHHHHHHHHHHHHhcCCCCccccchHHHHHhHHHHHHH
Q 002030 588 NIRVDRLKEWVCRNLQQE--VWNARA----NKE--SIAPSAVEVLRTIDETMEAFFMLPIPMHSVLLPELISGLDGCLQH 659 (978)
Q Consensus 588 ~~~~~ki~ewV~raiq~E--~W~P~s----~~e--~hS~SVVDvFrmi~Etvd~ff~L~~p~~~~lL~~Ls~Gid~~lq~ 659 (978)
+..-.++++|+.++.+.| .|--.+ +.+ -|++=.+++|.|+.+.++.+-.. .+++..-+-+.+-.
T Consensus 340 ~~~t~n~~ewl~~~~e~e~~~~~~~~~P~rd~~g~~~t~~p~~~fqmi~q~l~~~~~~--------~~Dl~~~~~~~~~~ 411 (667)
T KOG2286|consen 340 ERATANMKEWLMNALELEAAAWAKETEPPRDEEGYLYTPGPVIFFQMITQQLQVAAAT--------SSDLSGKILRSLLS 411 (667)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhhcCCCCccccccccCcccHHHHHhhHHHHHHHHhh--------HHHHHHHHHHHHHH
Confidence 777789999999999877 565432 333 47788899999999999988765 23343333333544
Q ss_pred HHHHHHhccCCCCCCCCCCCcccccccCcchhhhhhhccccccccccCcCCCCCCCCCCCccccee--ecccHHHHHHHH
Q 002030 660 YVLKAKSGCGSRNNFIPTMPALTRCTMGSKFGAFKRKEKLHTAQKRKSQVGTTNGDNSFGVPQLCC--RINTFQHIRKEL 737 (978)
Q Consensus 660 Y~~~v~~~~gske~~iP~~P~LTR~~~eskf~~~~KKa~~~~~~~e~~~~g~~~~~~s~~~~~LCV--rLNnLeyil~qL 737 (978)
|+....+ .|.++--+ .++.. +.+ ++-+++..|+ -.||+...+.
T Consensus 412 ~v~~f~~----------------~~~~~~~~---~~e~~----~~~----------~~~~l~~y~iA~~N~~~~~a~~-- 456 (667)
T KOG2286|consen 412 EVPSFAR----------------NYPKAQDE---DQESH----RRE----------QPEGLREYLIANINNNLKMAML-- 456 (667)
T ss_pred HhHHHHH----------------HHHHhHHH---HHHhc----hhc----------ccccHHHHHHHHHhchhHHHHH--
Confidence 4444321 11111000 01110 111 1112333332 2333332222
Q ss_pred HHHHHHHHhhhccCCCCCCCCcccchhhhhHHHHHHHHHHHHHHHHHhhhhhhhcccchhhHhhhccCcc-ccccchhhH
Q 002030 738 EVLEKKTVHQLRSSHSTRTDNITNGIEKRFELSAASSVEAIQQLSEAIAYKVIFHDLSHVLWDGLYVGEV-SSSRIEPFL 816 (978)
Q Consensus 738 d~LEk~I~~~w~~~~S~~~~~~~~~~~~~F~~ar~sl~~ai~~l~e~ia~rvVF~Dl~~~l~d~LY~g~V-~~~RI~p~L 816 (978)
+..-|... +.+....++.....+.|+..|.|. +|.|+...| ..||-..= +.+..+-+.
T Consensus 457 ------~~~~~~~~---------d~~~~~l~~~~~i~~~~~~~l~e~-----~~~d~~~~~-~~lf~~~W~~g~~~~~Iv 515 (667)
T KOG2286|consen 457 ------MVNLKSKY---------DTLKGLLDGFIEIAKHGVSGLLEE-----IFLDLQPLL-NKLFTKEWCAGSVTENIV 515 (667)
T ss_pred ------HHHHHhcc---------chhHHHhHHHHHHHHhHHHHHHHH-----HHHHHHHHH-HHHhhhhhhchhhHHHHH
Confidence 22222111 223334445555556777777666 788987444 44444332 236677888
Q ss_pred HHHHHHHHHHHhhhhhhhhHHHHHHHHHHHHHHHHHHHhCCCCCCCCCccchHHHHHHHHHHHHhcccCCCCCcHHHHHH
Q 002030 817 QELEHYLEIISSTVHDRVRTRVITDIMKASFEGFLLVLLAGGPSRAFTHQDSDIIEEDFKFLCDLFWSNGDGLPADLIDK 896 (978)
Q Consensus 817 ~~Ld~~L~~l~~~l~d~~r~~vv~~vmkAs~dafL~VLL~GGpsR~Fs~~D~~miEeDl~~LKd~F~a~GeGLp~e~Ve~ 896 (978)
..|+..|.-+.....+. +.++|-++-.+.+-.|++-|+-+- ++..+=.+-|..|.+.|++||---|+ .++.
T Consensus 516 ~T~~dy~~D~~~~~~~~-f~~fi~e~~~~~v~~Yl~~l~~kr---~~~~~~~~~i~~d~~~~~~~f~~~~~-----~~~~ 586 (667)
T KOG2286|consen 516 ATLDDYLPDFKELMGEY-FVRFIEEASLELVIEYLRALSKKR---ASIQELIEKIKSDAETLYHFFRKYGS-----DVDT 586 (667)
T ss_pred HHHHHHHHHHHHHhhhH-HHHHHHHHHHHHHHHHHHHHHhhh---hhHHHHHHHHHhhHHHHHHHHHHhCc-----chhh
Confidence 99999999999998888 999999999999999999999854 44333344566799999999988887 4555
Q ss_pred HHHhHhhhcccccc-ChHHHHHHHHHHhhhhcCCCCCccCCCCCCCCCCCCCCccceeeeccccCchh
Q 002030 897 FSTSVRSILPLYHN-DTESLIEEFKRLTLESYGSSAKSRLPLPPTSGQWNPTEPNTVLRVLCYRSDET 963 (978)
Q Consensus 897 ~a~~v~~Vl~L~~~-~Te~LIe~f~~a~~~~~g~~~~s~~p~ppt~~~w~~~d~nTiLRVLchR~D~~ 963 (978)
....+.-|..|++. +-|.++..+...- +.+ |+ ...+-|-+||--|.|=.
T Consensus 587 ~~~~~~~l~el~~~~d~d~~~~~~~~l~-~~Y----------------pD-~~~~~l~~il~~R~dls 636 (667)
T KOG2286|consen 587 LISTISTLAELISLQDPDLIKLEVSTLL-ECY----------------PD-IPKDHLEAILKIRGDLS 636 (667)
T ss_pred hhhhhHHHHHHHhcCChHHHHHHHHHHH-HHC----------------CC-CcHHHHHHHHHHhcCCC
Confidence 55555555554443 7788888777665 122 22 34556777777777644
No 8
>PF04091 Sec15: Exocyst complex subunit Sec15-like ; InterPro: IPR007225 Sec15 is a component of the exocyst complex involved in the docking of exocystic vesicles with a fusion site on the plasma membrane. The exocyst complex is composed of Sec3, Sec5, Sec6, Sec8, Sec10, Sec15, Exo70 and Exo84.; GO: 0006904 vesicle docking involved in exocytosis, 0000145 exocyst; PDB: 2A2F_X.
Probab=96.58 E-value=0.0098 Score=67.10 Aligned_cols=251 Identities=15% Similarity=0.129 Sum_probs=143.5
Q ss_pred CCCCCccHHHHHHHHHHHHHHHhcCCCCccccchHHHHHhHHHHHHHHHHHHHhccCCCCCCCCCCCcccccccCcchhh
Q 002030 613 KESIAPSAVEVLRTIDETMEAFFMLPIPMHSVLLPELISGLDGCLQHYVLKAKSGCGSRNNFIPTMPALTRCTMGSKFGA 692 (978)
Q Consensus 613 ~e~hS~SVVDvFrmi~Etvd~ff~L~~p~~~~lL~~Ls~Gid~~lq~Y~~~v~~~~gske~~iP~~P~LTR~~~eskf~~ 692 (978)
.=+||+.+..+.+.++..++.++.+-...+- . ..-++..+.+|.+.+.. | .+-+
T Consensus 27 ~lPFS~~vp~~c~~ir~fi~~~~~F~~~~~~-~----~~eid~~v~ks~d~lL~----------------~-----~l~~ 80 (311)
T PF04091_consen 27 KLPFSQMVPMCCRQIRSFIEKCYKFSDDLYQ-S----STEIDDIVRKSLDRLLT----------------R-----VLNG 80 (311)
T ss_dssp -SSSBTHHHHHHHHHHHHHHHHHHHHHHTT-------HHHHHHHHHHHHHHHHH----------------H-----HHHH
T ss_pred eCCCchHHHHHHHHHHHHHHHHHHHHHhccc-c----hHHHHHHHHHHHHHHHH----------------H-----HHHH
Confidence 3489999999999999999999876422211 1 22345567777776632 1 0111
Q ss_pred hhhhccccccccccCcCCCCCCCCCCCcccceeecccHHHHHHHHHHHHHHHHhhhccCCCCCCCCcccchhhhhHHHHH
Q 002030 693 FKRKEKLHTAQKRKSQVGTTNGDNSFGVPQLCCRINTFQHIRKELEVLEKKTVHQLRSSHSTRTDNITNGIEKRFELSAA 772 (978)
Q Consensus 693 ~~KKa~~~~~~~e~~~~g~~~~~~s~~~~~LCVrLNnLeyil~qLd~LEk~I~~~w~~~~S~~~~~~~~~~~~~F~~ar~ 772 (978)
-.++... .+ .+..+++=.+.|++|...-...||+.|...-+...+ .....+......|..+|+
T Consensus 81 ~L~~~i~---------------~~-~~l~qi~Qi~iNl~~le~Ac~~le~~l~~~~~~~~~-~~~~~~l~a~~~f~~~r~ 143 (311)
T PF04091_consen 81 SLKSKIR---------------SS-LNLSQIVQIVINLEYLEKACKELEEFLSSLRGIPQS-AGGHIRLKATKMFKDARK 143 (311)
T ss_dssp HHHHHHT----------------T-S-HHHHHHHHHHHHHHHTTHHHHHHHHHHHHT-----------------S---TT
T ss_pred HHHHHHh---------------cC-CCHHHHHHHHHhHHHHHHHHHHHHHHHHHHcCCCcc-chHhHhhhhHHHHHHHHH
Confidence 1122110 01 356788889999999999999999977654322111 111112345678888887
Q ss_pred HHHHHHHHHHHHhhhhhh-hcccchhhHhhhccCccccccchhhHHHHHHHHHHHHhhhhhhhhHHHHHHHHHHHHHHHH
Q 002030 773 SSVEAIQQLSEAIAYKVI-FHDLSHVLWDGLYVGEVSSSRIEPFLQELEHYLEIISSTVHDRVRTRVITDIMKASFEGFL 851 (978)
Q Consensus 773 sl~~ai~~l~e~ia~rvV-F~Dl~~~l~d~LY~g~V~~~RI~p~L~~Ld~~L~~l~~~l~d~~r~~vv~~vmkAs~dafL 851 (978)
.+...| .+.+..|+- |+++-+.=|..--..+-++.=|..++.+|+.....+-..+...++..+..+.|+.+-+.|+
T Consensus 144 ~Ae~~I---~~lv~~KIDe~lela~yDW~~~~~~~~ps~yi~dli~fL~~~f~s~l~~LP~~v~~~~~~~a~~his~~l~ 220 (311)
T PF04091_consen 144 AAEKRI---FELVNSKIDEFLELAEYDWTPTEPPGEPSDYINDLIQFLETTFSSTLTNLPPSVKQLVYFSACDHISESLL 220 (311)
T ss_dssp HHHHHH---HHHHHHHHHHHHTT--TT--------S--HHHHHHHHHHHHHHHTTTTTSH-HHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHH---HHHHHHHHHHHHhhcccceecCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHH
Confidence 555544 455555642 4454332233322222245668999999999998888999999999999999999999999
Q ss_pred HHHhCCCCCCCCCccchHHHHHHHHHHHHhcccC-CCCCcHHHHHHHHHhHhhhcccccc
Q 002030 852 LVLLAGGPSRAFTHQDSDIIEEDFKFLCDLFWSN-GDGLPADLIDKFSTSVRSILPLYHN 910 (978)
Q Consensus 852 ~VLL~GGpsR~Fs~~D~~miEeDl~~LKd~F~a~-GeGLp~e~Ve~~a~~v~~Vl~L~~~ 910 (978)
-.|++.. -+.++..=+.-++-|++.|.+|--+. ..|.....+...-..+++.++|+-.
T Consensus 221 ~~Ll~~~-vk~in~~al~~~~~Dv~~lE~f~~~~~~~~~~~~~L~~~F~eLrQlvdLl~s 279 (311)
T PF04091_consen 221 DLLLSDD-VKRINMNALQNFDLDVKYLESFADSLPVPGNNIPSLRETFAELRQLVDLLLS 279 (311)
T ss_dssp HHHT----------TTHHHHHHHHHHHHHHHTT-SSSS--SSTTGGGGHHHHHHHHHHH-
T ss_pred HHhcCCc-ccccCHHHHHHHHHHHHHHHHHHHhCcCcccccccHHHHHHHHHHHHHHHhc
Confidence 9988554 46679999999999999999998877 1222222333344567777776644
No 9
>PF04437 RINT1_TIP1: RINT-1 / TIP-1 family; InterPro: IPR007528 This family includes RINT-1, a Rad50 interacting protein which participates in radiation induced checkpoint control [], that interacts with Rad50 only during late S and G2/M phases. RINT1 also functions in membrane trafficking from the endoplasmic reticulum(ER) to the Golgi complex in interphase cells [, , ]. In addition to this, the TIP-1 protein, which is involved in the retrograde transport from the Golgi to the ER []. They share a similar domain organisation with an N-terminal leucine heptad repeat rich coiled coil and an ~500-residue C-terminal RINT1/TIP20 domain, which might be a protein-protein interaction module necessary for the formation of functional complexes.; PDB: 3FHN_A.
Probab=96.38 E-value=0.29 Score=58.58 Aligned_cols=291 Identities=16% Similarity=0.212 Sum_probs=152.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhh-ccccccCCCC-------CCCCccHHHHHHHHHHHHHHHhcCCCCc-cccchHHHH
Q 002030 580 GNLAKSWINIRVDRLKEWVCRNLQ-QEVWNARANK-------ESIAPSAVEVLRTIDETMEAFFMLPIPM-HSVLLPELI 650 (978)
Q Consensus 580 ~~lV~~Wi~~~~~ki~ewV~raiq-~E~W~P~s~~-------e~hS~SVVDvFrmi~Etvd~ff~L~~p~-~~~lL~~Ls 650 (978)
......|++--.+-..+=++..+. .+.|++..+. -+=..|++.+.++++...+.+-.||-.. ...|+..+-
T Consensus 131 ~~~~~~Wl~~E~~~a~~r~~~i~~s~~aw~~~~~~~~~~~~~~k~t~~A~~~~~Ll~~it~ry~~L~~~~~rl~Fl~~iq 210 (494)
T PF04437_consen 131 PDWFDRWLNAEKEFALERFDEIISSPDAWQIDYDDVEADSDELKPTKSAERFVKLLESITDRYRPLPSLSHRLRFLIDIQ 210 (494)
T ss_dssp HHHHHHHHHHHHHHHHHHHH---------------HTTSSGGGG-GGHHHHHHHHHHHHHHHHHHHHH---GG--GHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHhhhcccchhhhhhhccccCCchhhcchHHHHHHHHHHHHHHHHHhhcCchHHHHHHHHHHH
Confidence 466788988766666666666655 4578887422 1446889999999999999988887553 445664444
Q ss_pred HhHHHHHHHHHHHHHhccCCCCCCCCCCCcccccccCcchhhhhhhccccccccccCcCCCCCCCCCCCcccceeecccH
Q 002030 651 SGLDGCLQHYVLKAKSGCGSRNNFIPTMPALTRCTMGSKFGAFKRKEKLHTAQKRKSQVGTTNGDNSFGVPQLCCRINTF 730 (978)
Q Consensus 651 ~Gid~~lq~Y~~~v~~~~gske~~iP~~P~LTR~~~eskf~~~~KKa~~~~~~~e~~~~g~~~~~~s~~~~~LCVrLNnL 730 (978)
-.| +..|-..+...|- .|.. ..... ....+ .-+..++|..+|+.
T Consensus 211 l~l---ld~~~~~L~~~~~-------------------~~~~-~~s~~-~~~~~------------~~~l~~l~~~lnsa 254 (494)
T PF04437_consen 211 LPL---LDDYHDRLSQSLE-------------------AFES-STSTL-ASLSG------------DSGLERLCKILNSA 254 (494)
T ss_dssp HHH---HHHTHHHHHHHHH-------------------HHHH-T-----SCEEH------------HHHHHHHHHHHHHH
T ss_pred HHH---HHHHHHHHHHHHH-------------------HHhh-cccch-hhccC------------CchHHHHHHHHHHH
Confidence 332 3333333322220 0000 00000 00000 01466899999999
Q ss_pred HHHHHHHHHHHHHHHhh---hccCCC-CCC-CCccc----chhhhhHHHHHHHHHHHHHHHHHhhhhhh------hcccc
Q 002030 731 QHIRKELEVLEKKTVHQ---LRSSHS-TRT-DNITN----GIEKRFELSAASSVEAIQQLSEAIAYKVI------FHDLS 795 (978)
Q Consensus 731 eyil~qLd~LEk~I~~~---w~~~~S-~~~-~~~~~----~~~~~F~~ar~sl~~ai~~l~e~ia~rvV------F~Dl~ 795 (978)
+|+...|....+.+-.= .....+ ... .+..+ .-.+.|+.+.+....-.+++.+.+...++ .....
T Consensus 255 ~yi~~~L~eW~e~~~Flq~~~~~~~~~~~~~~~~~~~~~~~~~siFde~i~~y~~l~~~~~~~iv~~v~~~~k~~lk~Y~ 334 (494)
T PF04437_consen 255 NYIENVLREWSEDVFFLQMRAKESESSNNSLEDIANETSSEEGSIFDETISAYEKLRKRMLESIVDRVVKEFKASLKAYF 334 (494)
T ss_dssp HHHHHHHHHHCTSHHHH------------HHHHHHHHHTT--S-TTHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTHHHH
T ss_pred HHHHHHHHHhcCCCeeehhhccchhhcccccccccccccCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 99999998877743221 000000 000 00111 12458888888887776666666655432 11111
Q ss_pred h-hhHhhhccC-----ccccccchhhHHHHHHHHHHHHhhhhhhhhHHHHHHHHHHHHHHHHHHHhCCCCCCCCCccchH
Q 002030 796 H-VLWDGLYVG-----EVSSSRIEPFLQELEHYLEIISSTVHDRVRTRVITDIMKASFEGFLLVLLAGGPSRAFTHQDSD 869 (978)
Q Consensus 796 ~-~l~d~LY~g-----~V~~~RI~p~L~~Ld~~L~~l~~~l~d~~r~~vv~~vmkAs~dafL~VLL~GGpsR~Fs~~D~~ 869 (978)
+ .-|...... ...++.+-|+|..|...|..|...+......++-+.|...+-+-+.--++- ...|+.....
T Consensus 335 k~~~W~~~~~~~~~~~~~~S~el~~~L~~L~~~L~~L~~~L~~~~f~~i~r~ia~~l~~~l~~~Il~---~n~Fs~~Ga~ 411 (494)
T PF04437_consen 335 KRSQWSSIESPSDSSPLSPSPELVPALSLLRSRLSFLERSLPPADFRRIWRRIASKLDDYLWESILM---SNKFSRAGAA 411 (494)
T ss_dssp T--GGGT-------------GGGHHHHHHHHHHHHHHHTS--HHHHHHHHHHHHHHHHHHHHHTTTT---TS-B-HHHHH
T ss_pred CccCCCCcccccccccCCCCHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHhhh---cCeeChhHHH
Confidence 2 224444433 123678999999999999999999887777777666666655554443333 2399999999
Q ss_pred HHHHHHHHHHHhcccCCCCCcHHHHHHHHHhHhhhccccccChHH
Q 002030 870 IIEEDFKFLCDLFWSNGDGLPADLIDKFSTSVRSILPLYHNDTES 914 (978)
Q Consensus 870 miEeDl~~LKd~F~a~GeGLp~e~Ve~~a~~v~~Vl~L~~~~Te~ 914 (978)
-++.|++.|...|-. ..+.|+ +....+...+.|+.++.+.
T Consensus 412 Ql~~D~~~L~~~~~~-~~~~p~----~~f~~l~E~~~LL~L~~~~ 451 (494)
T PF04437_consen 412 QLQFDMRALFSVFSQ-YTPRPE----AFFKRLREACKLLNLPYGS 451 (494)
T ss_dssp HHHHHHHHHHTTS---TTSGG-----HHHHHHHHHHHHHGGGG-C
T ss_pred HHHHHHHHHHHHHHh-hccCHH----HHHHHHHHHHHHcCCCCcc
Confidence 999999999999988 333344 4455555555566555553
No 10
>COG5173 SEC6 Exocyst complex subunit SEC6 [Intracellular trafficking and secretion]
Probab=94.78 E-value=13 Score=45.01 Aligned_cols=312 Identities=19% Similarity=0.273 Sum_probs=174.8
Q ss_pred hHHHHHHHHHHHHHHHHHHHHhhhhcc--ccccCC-------CCCCCCccHHHHHHHHHHHHHHHhcCCCCccccchHHH
Q 002030 579 IGNLAKSWINIRVDRLKEWVCRNLQQE--VWNARA-------NKESIAPSAVEVLRTIDETMEAFFMLPIPMHSVLLPEL 649 (978)
Q Consensus 579 ~~~lV~~Wi~~~~~ki~ewV~raiq~E--~W~P~s-------~~e~hS~SVVDvFrmi~Etvd~ff~L~~p~~~~lL~~L 649 (978)
-+.+++.+.+-...|++||+.+..+.| +|-.++ +.-.+.+--+=.|.||.+-++..-.=+ .++++--.
T Consensus 373 ~g~L~~~Yt~l~~~Kl~EWv~nl~~~evd~F~~R~~ep~~Dsdg~l~l~Gt~~~fQmitqQ~e~ia~tn---~sdvvgiV 449 (742)
T COG5173 373 TGELLEKYTKLAQEKLKEWVMNLTRIEVDKFYARNEEPSRDSDGKLVLPGTVSLFQMITQQLEPIAFTN---RSDVVGIV 449 (742)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCcCCCcCccCccHHHHHHHHHHHhhhhhcCC---ccchhhhh
Confidence 357888888999999999999988765 564444 223467778899999999888654433 44455555
Q ss_pred HHhHHHHHHHHHHHHHhccCCCCCCCCCCCcccccccCcchhhhhhhccccccccccCcCCCCCCCCCCCcccceeeccc
Q 002030 650 ISGLDGCLQHYVLKAKSGCGSRNNFIPTMPALTRCTMGSKFGAFKRKEKLHTAQKRKSQVGTTNGDNSFGVPQLCCRINT 729 (978)
Q Consensus 650 s~Gid~~lq~Y~~~v~~~~gske~~iP~~P~LTR~~~eskf~~~~KKa~~~~~~~e~~~~g~~~~~~s~~~~~LCVrLNn 729 (978)
...|...++.|+..-++.+. + -++|-...++ + .+.+-|+-+-|+..-|
T Consensus 450 ~~~i~~~~tk~q~~wks~l~--e--------------------e~~kq~~~np-E---------s~~p~Gl~eyliav~N 497 (742)
T COG5173 450 FAHITRTITKYQEIWKSNLV--E--------------------EMDKQFKSNP-E---------SSSPAGLEEYLIAVGN 497 (742)
T ss_pred HHHHHHHHHHHHHHHHHHHH--H--------------------HHHHHhcCCC-c---------cCCcchHHHHHHHHcC
Confidence 55555668888776533220 0 0111110000 0 0111122222222211
Q ss_pred -----HHHHHHHHHHHHHHHHhhhccCCCCCCCCcccchhhhhHHHHHHHHHHHHHHHHHhhhhhhhcccchhh----Hh
Q 002030 730 -----FQHIRKELEVLEKKTVHQLRSSHSTRTDNITNGIEKRFELSAASSVEAIQQLSEAIAYKVIFHDLSHVL----WD 800 (978)
Q Consensus 730 -----Leyil~qLd~LEk~I~~~w~~~~S~~~~~~~~~~~~~F~~ar~sl~~ai~~l~e~ia~rvVF~Dl~~~l----~d 800 (978)
-+||-.-..+--+-|..-+ .......+...-++=-.-++.+.-.|.++ +|.|++.++ -+
T Consensus 498 d~lK~A~y~~~~~sntfeLitsey-------e~d~~~~lgkTvDgfi~I~~~s~~~l~~~-----i~~d~~pa~~~iF~~ 565 (742)
T COG5173 498 DGLKIAQYITSLPSNTFELITSEY-------ENDEVKELGKTVDGFIDILKASNTFLAEF-----IIYDCQPAIDKIFTD 565 (742)
T ss_pred CcchHHHHHHhcchhhhhhhhHHH-------HHHHHHHhcccchhHHHHHhhhhHHHHHH-----HHHhhhhhHHHhcCc
Confidence 1222221111111110000 00000011111111122223334444444 566887643 44
Q ss_pred hhccCccccccchhhHHHHHHHHHHHHhhhhhhhhHHHHHHHHHHHHHHHHHHHhCCCCCCCCCccch--HHHHHHHHHH
Q 002030 801 GLYVGEVSSSRIEPFLQELEHYLEIISSTVHDRVRTRVITDIMKASFEGFLLVLLAGGPSRAFTHQDS--DIIEEDFKFL 878 (978)
Q Consensus 801 ~LY~g~V~~~RI~p~L~~Ld~~L~~l~~~l~d~~r~~vv~~vmkAs~dafL~VLL~GGpsR~Fs~~D~--~miEeDl~~L 878 (978)
.-|.|.+.. -+.+.|+..|.-.-....+-+...++-++--+.+=+||.-| |--|+|-.+|. +-|..|+..+
T Consensus 566 ~Wy~gS~~k----~IvdTl~dyl~D~~~~M~~~lFv~Fi~e~s~~~vi~yl~~l---~~k~a~~~~~na~~~lksD~~~~ 638 (742)
T COG5173 566 EWYGGSVTK----VIVDTLQDYLSDYQNTMSEYLFVTFIHELSMSIVIAYLKQL---GRKRASIAEENASRTLKSDHTKL 638 (742)
T ss_pred cccccchHH----HHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHH---hhhhhhhcchhHHHHHHHHHHHH
Confidence 567766554 45566666666666666677777788888888888888877 44788888885 6788899999
Q ss_pred HHhcccCCCCCcHHHHHHHHHhHhhhccccccChH-HHHHHHHHHhhhhcCCCCCccCCCCCCCCCCCCCCccceeeecc
Q 002030 879 CDLFWSNGDGLPADLIDKFSTSVRSILPLYHNDTE-SLIEEFKRLTLESYGSSAKSRLPLPPTSGQWNPTEPNTVLRVLC 957 (978)
Q Consensus 879 Kd~F~a~GeGLp~e~Ve~~a~~v~~Vl~L~~~~Te-~LIe~f~~a~~~~~g~~~~s~~p~ppt~~~w~~~d~nTiLRVLc 957 (978)
.++|-.-|+| +-+.....++..++++|+...+ ..++.++..- +.+ |+ .-..-|--||-
T Consensus 639 y~~f~~y~d~---e~~k~tl~pI~k~~~~m~~~~~d~~~~~~~~lk-eiY----------------wD-~~~sli~~Ilk 697 (742)
T COG5173 639 YEMFSGYGDP---EDVKTTLSPILKIIPLMDTRNDDLFIVEVKSLK-EIY----------------WD-IKKSLIKTILK 697 (742)
T ss_pred HHHHHhhCCH---HHHHHHHHHHHHHHcccccCCchHHHHHHHHHH-HHh----------------cc-chHHHHHHHHH
Confidence 9999887763 4455566778999998876654 4455444443 222 22 12234566777
Q ss_pred ccCchhHH
Q 002030 958 YRSDETAV 965 (978)
Q Consensus 958 hR~D~~As 965 (978)
.|.|-+-|
T Consensus 698 ~R~Dl~~s 705 (742)
T COG5173 698 KRQDLTES 705 (742)
T ss_pred hhhhhHHH
Confidence 77776655
No 11
>KOG3543 consensus Ca2+-dependent activator protein [Signal transduction mechanisms]
Probab=93.70 E-value=3.7 Score=49.78 Aligned_cols=226 Identities=15% Similarity=0.184 Sum_probs=131.3
Q ss_pred HHHHhhhhhhhhccCCch-hhHhHHHHHHHHHhhhhhcchhhhhccccCccccchhhHHHHHHhhHHHH----HHHHHhh
Q 002030 383 WAGQRLRDYHDIFHDDNI-DSLETVVSLGVLSATILVEGISQEYRGKKNQVDVAHDRVDTYIRSSLRTA----FAQKLKK 457 (978)
Q Consensus 383 W~ekrL~dYH~~f~~~~~-~~me~~~sl~~~a~kil~ed~~~~~~~~~~~~~~~~~rid~yI~sS~~~a----f~~~~e~ 457 (978)
-.|++...+.--|+=|.. +.+.+.+++ --++|-.|+. + -+...-|..-||.-+..| |+|+-+-
T Consensus 719 llenqithfrycfpfgrpegalkatlsl---lervlmkdiv-------t--pvp~eevk~virkcle~aalvnytrl~ey 786 (1218)
T KOG3543|consen 719 LLENQITHFRYCFPFGRPEGALKATLSL---LERVLMKDIV-------T--PVPPEEVKAVIRKCLEDAALVNYTRLCEY 786 (1218)
T ss_pred HHHhhhhceEeeccCCCcchHHHHHHHH---HHHHHHHhcC-------C--CCCHHHHHHHHHHHHHHHHhhhHHHHHHH
Confidence 457777777766765442 346666655 4456665553 1 134556667777666655 5554443
Q ss_pred hccccccccCCCC---chHHHHHHHHHH-HHHHhhhhhccccchhhhcchhHHHHHHHHHHHHHhhHHHHHhhhhccChh
Q 002030 458 VNSSKKLSKNQPN---HLPVLSILAQDV-TELAFDEKTIFSPILKRWHPLAAGVAVATLHSCYGNELRQFVSGITELTPD 533 (978)
Q Consensus 458 ~~~~~~~~~~~~~---~~~~L~~LA~~~-~~la~~e~~~fSPiL~~whp~A~~vAa~~Lh~~Yg~~Lk~~L~~v~~lt~d 533 (978)
+.-.. ......+ ..+-...||+-+ +.|-.|| +...-.|.-|. --.+.-|-.+-++|..|+-.-|+-- .+|
T Consensus 787 akiee-~m~~a~~~a~kled~irlaelcievlqqne-ehhgeafawws-dll~ehae~fwslfsvdmdsalevq---p~d 860 (1218)
T KOG3543|consen 787 AKIEE-RMGIAVSPAQKLEDMIRLAELCIEVLQQNE-EHHGEAFAWWS-DLLSEHAEIFWSLFSVDMDSALEVQ---PHD 860 (1218)
T ss_pred HHHHH-HhccccCHHHHHHHHHHHHHHHHHHHHhhh-hhcchHHHhHH-HHHHHHHHHHHHHHhcccchhcccC---CCC
Confidence 22110 0000111 112333344433 3333444 22222332222 2222444556666666655433221 234
Q ss_pred HHhhchhhhHHHHHHHHHHhhccccCCCCcccccccCCCchhhhhhHHHHHHHHHHHHHHHHHHHHhhhhccccccCCCC
Q 002030 534 AIQVLLAADKLEKNLVQIAVEDSVDSEDGGKSIIQEMPPYEAEAAIGNLAKSWINIRVDRLKEWVCRNLQQEVWNARANK 613 (978)
Q Consensus 534 ~~~vl~aAd~LE~~L~~i~~e~s~~~~dggk~~~r~m~PyeiE~~~~~lV~~Wi~~~~~ki~ewV~raiq~E~W~P~s~~ 613 (978)
+-..+|--..|..+|. -|+ +++...|.=.+-..|.|+|-++++--..-|..-++|-+++|+|+|..+.
T Consensus 861 swdsfplfqllndflr----~d~--------~lcngkfhkhlq~~f~plvvryvdlmessiaqsihrgfe~e~wepvkng 928 (1218)
T KOG3543|consen 861 SWDSFPLFQLLNDFLR----SDS--------SLCNGKFHKHLQQQFQPLVVRYVDLMESSIAQSIHRGFEKEKWEPVKNG 928 (1218)
T ss_pred ccccchHHHHHHHHHh----hhh--------hcccchhHHHHHHHhhhHHHHHHHHHHHHHHHHHhccchhhccccccCC
Confidence 4444444444444443 122 2334456778999999999999999999999999999999999999865
Q ss_pred CCCCccHHHHHHHHHHHHHHHhcCCCCc
Q 002030 614 ESIAPSAVEVLRTIDETMEAFFMLPIPM 641 (978)
Q Consensus 614 e~hS~SVVDvFrmi~Etvd~ff~L~~p~ 641 (978)
. ...-|+|=-++..--..+.|.||.
T Consensus 929 s---atsedlfwkldalqtfv~dlhwpe 953 (1218)
T KOG3543|consen 929 S---ATSEDLFWKLDALQTFVIDLHWPE 953 (1218)
T ss_pred C---cchHhHHHHHHHHHHHHhhcCCCH
Confidence 4 455799988888888889999995
No 12
>PF04100 Vps53_N: Vps53-like, N-terminal ; InterPro: IPR007234 Vps53 complexes with Vps52 and Vps54 to form a multi-subunit complex involved in regulating membrane trafficking events [].
Probab=71.86 E-value=2.1e+02 Score=33.70 Aligned_cols=115 Identities=17% Similarity=0.222 Sum_probs=78.8
Q ss_pred hccccchh-hhcchhHHHHHHHHHHHHHhhHHHHHhhhh-ccC-hhHHhhchhhhHHHHHHHHHHhhccccC--CCCccc
Q 002030 491 TIFSPILK-RWHPLAAGVAVATLHSCYGNELRQFVSGIT-ELT-PDAIQVLLAADKLEKNLVQIAVEDSVDS--EDGGKS 565 (978)
Q Consensus 491 ~~fSPiL~-~whp~A~~vAa~~Lh~~Yg~~Lk~~L~~v~-~lt-~d~~~vl~aAd~LE~~L~~i~~e~s~~~--~dggk~ 565 (978)
+.|+.+|= .|+ .+...| ..++.+=-.+|...|++.. +++ .-.+..|+..-.+|++|..-........ ..++..
T Consensus 262 ~~~~~iFP~~W~-v~~~L~-~~Fc~~Tr~dL~~iL~~~~~~~dv~~Ll~aLq~T~~FE~~L~~rF~~~~~~~~~~~~~~e 339 (383)
T PF04100_consen 262 EKFANIFPPSWR-VPERLC-VEFCEITRKDLSEILSKRKSELDVKLLLKALQKTLEFEKELAKRFAGSTDESQEIEKKKE 339 (383)
T ss_pred hhccccCCCcCc-HHHHHH-HHHHHHHHHHHHHHHhhcCCCCcHHHHHHHHHHHHHHHHHHHHHhccccccccccccccc
Confidence 45777754 499 777555 4556666788999995532 244 5567788889999999986652111000 000000
Q ss_pred --ccccCCCchhhhhhHHHHHHHHHHHHHHHHHHHHhhhhcccc
Q 002030 566 --IIQEMPPYEAEAAIGNLAKSWINIRVDRLKEWVCRNLQQEVW 607 (978)
Q Consensus 566 --~~r~m~PyeiE~~~~~lV~~Wi~~~~~ki~ewV~raiq~E~W 607 (978)
....-+.--|-+.|.||+.-||+.+.+.+.+.+++.++.|+|
T Consensus 340 ~~~~~~~f~g~IS~~FepyL~iyv~~qdk~L~~~l~~~~~~~~w 383 (383)
T PF04100_consen 340 MKEIAENFKGIISSCFEPYLSIYVDSQDKNLSEKLDKFISEEKW 383 (383)
T ss_pred ccccccccccchHHhhHhhHHHHHHHHHHHHHHHHHHHHhhcCC
Confidence 000123335889999999999999999999999999999999
No 13
>PF06292 DUF1041: Domain of Unknown Function (DUF1041); InterPro: IPR010439 This entry represents Calcium-dependent secretion activators that are involved in the exocytosis of vesicles filled with neurotransmitters and neuropeptides. They also may specifically mediate the Ca2+-dependent exocytosis of large dense-core vesicles (DCVs) and other dense-core vesicles by acting as a PtdIns(4,5)P2-binding protein that acts at prefusion step following ATP-dependent priming and participates in DCVs-membrane fusion []. However, it probably also participates in small clear synaptic vesicles (SVs) exocytosis and it is unclear whether its function is related to Ca2+ triggering []. This protein is often found in tandem repeats and co-occur with C2 domains IPR000008 from INTERPRO, Protein kinase C, phorbol ester/diacylglycerol binding regions IPR002219 from INTERPRO and PH domains IPR001849 from INTERPRO.
Probab=67.01 E-value=23 Score=34.45 Aligned_cols=54 Identities=13% Similarity=0.231 Sum_probs=46.4
Q ss_pred hHHHHHHHHHHHHHHhhhhhccccchhh--hcchhHHHHHHHHHHHHHhhHHHHHh
Q 002030 472 LPVLSILAQDVTELAFDEKTIFSPILKR--WHPLAAGVAVATLHSCYGNELRQFVS 525 (978)
Q Consensus 472 ~~~L~~LA~~~~~la~~e~~~fSPiL~~--whp~A~~vAa~~Lh~~Yg~~Lk~~L~ 525 (978)
...+..||.=+-++..-+++.|+|+|.. |-|.-+.+.|-++=++|..|++..|+
T Consensus 49 Le~w~~L~eL~v~vleed~e~y~~vln~F~~~~~l~~~hAE~fWsLfa~Dm~~aLe 104 (106)
T PF06292_consen 49 LEFWIRLIELCVSVLEEDKEHYAPVLNQFPWELDLGVEHAEIFWSLFAVDMDAALE 104 (106)
T ss_pred HHHHHHHHHHHHHHHHhhhhhhhhHhhhchhhhhHHHHHHHHHHHHHHHHHHHHHH
Confidence 4677778888888888888999999987 66788889999999999999998775
No 14
>PF15080 DUF4547: Domain of unknown function (DUF4547)
Probab=61.62 E-value=22 Score=37.01 Aligned_cols=96 Identities=19% Similarity=0.336 Sum_probs=72.2
Q ss_pred cccchhhHHHHHHHHHHHHhhhhhhhhHHHHHHHHHHHHHHHHHHHhCCCCCCCCCccchHHHHHHHHHHHHhcccCCC-
Q 002030 809 SSRIEPFLQELEHYLEIISSTVHDRVRTRVITDIMKASFEGFLLVLLAGGPSRAFTHQDSDIIEEDFKFLCDLFWSNGD- 887 (978)
Q Consensus 809 ~~RI~p~L~~Ld~~L~~l~~~l~d~~r~~vv~~vmkAs~dafL~VLL~GGpsR~Fs~~D~~miEeDl~~LKd~F~a~Ge- 887 (978)
..|+..-|+.|..-|-++++++--.+++.=|+-+|...++. +-+=|.|...|.-||++.|.
T Consensus 70 ht~VlEkLPdL~r~LPTlASvLrrKvkN~~Ir~vwesvLee------------------~GLqE~dv~aLCtFfiahgnk 131 (196)
T PF15080_consen 70 HTRVLEKLPDLVRGLPTLASVLRRKVKNKRIRVVWESVLEE------------------CGLQEGDVTALCTFFIAHGNK 131 (196)
T ss_pred HHHHHHHhhHHHhCcchHHHHHHHHhhchHHHHHHHHHHHH------------------cCCCcccHHHHHHHHHHhcch
Confidence 67888889999999999999999999999999999987654 34557889999999999994
Q ss_pred --CCcHHHHHHHHHhHhhhccccccChHHHHHHHHHHh
Q 002030 888 --GLPADLIDKFSTSVRSILPLYHNDTESLIEEFKRLT 923 (978)
Q Consensus 888 --GLp~e~Ve~~a~~v~~Vl~L~~~~Te~LIe~f~~a~ 923 (978)
-.+..+-.-.+..+.-.+.-|-.. ..|-+-+.++.
T Consensus 132 aehy~a~~R~~yi~dv~~mItnmVkN-qalq~~llrAv 168 (196)
T PF15080_consen 132 AEHYAAKVRQMYIRDVTFMITNMVKN-QALQDGLLRAV 168 (196)
T ss_pred HhHhHHHHHHHHHhhHHHHHHHHHhh-HHHHHHHHHHH
Confidence 246666666666666655555432 23445555555
No 15
>PF14923 CCDC142: Coiled-coil protein 142
Probab=60.20 E-value=10 Score=45.24 Aligned_cols=102 Identities=21% Similarity=0.291 Sum_probs=77.3
Q ss_pred hccCccccccchhhHHHHHHHHHHHHhhhhhhhhHHHHHHHHHHHHHHHHHHHhCCCCCCCCCccchHHHHHHHHHHHHh
Q 002030 802 LYVGEVSSSRIEPFLQELEHYLEIISSTVHDRVRTRVITDIMKASFEGFLLVLLAGGPSRAFTHQDSDIIEEDFKFLCDL 881 (978)
Q Consensus 802 LY~g~V~~~RI~p~L~~Ld~~L~~l~~~l~d~~r~~vv~~vmkAs~dafL~VLL~GGpsR~Fs~~D~~miEeDl~~LKd~ 881 (978)
.|++.+.+.-+.|+++.+ ..+.++++--+++.+++|..+++|--+|--+. -||.+-.--+..||..++++
T Consensus 276 ~Yv~~~v~~vl~PVl~g~--------q~L~~~aq~~~l~~~l~a~~eAWLdhIl~~kI--KFS~~GAlQL~~DF~~Vr~w 345 (450)
T PF14923_consen 276 EYVEYVVETVLEPVLQGV--------QGLPPEAQIPALSQALTAMLEAWLDHILMHKI--KFSLQGALQLRQDFGYVRDW 345 (450)
T ss_pred HHHHHHHHHHHHHHHHHh--------cCCChHHHHHHHHHHHHHHHHHHHHHHHHccc--eeeHHHHHHHHHHHHHHHHH
Confidence 444444444444444432 34578888999999999999999999997533 58888899999999999999
Q ss_pred cccCCCCCcHHHHHHH-----HHhHhhhcc-ccccChH
Q 002030 882 FWSNGDGLPADLIDKF-----STSVRSILP-LYHNDTE 913 (978)
Q Consensus 882 F~a~GeGLp~e~Ve~~-----a~~v~~Vl~-L~~~~Te 913 (978)
-..+--||+.|+.++- ...+.+|+. |++++.+
T Consensus 346 l~~e~~~Ls~e~rq~Ll~l~v~r~~dgv~~lLlqqP~~ 383 (450)
T PF14923_consen 346 LESECSGLSPELRQTLLSLEVFRRCDGVGLLLLQQPGP 383 (450)
T ss_pred HHhhhccCCHHHHHHHhccHHHHHHHHHHHHHhcCCCC
Confidence 9999999999988773 667777877 5555433
No 16
>KOG0433 consensus Isoleucyl-tRNA synthetase [Translation, ribosomal structure and biogenesis]
Probab=49.94 E-value=66 Score=40.74 Aligned_cols=101 Identities=17% Similarity=0.307 Sum_probs=67.9
Q ss_pred cceeecccH----HHHHHHHHHHHHHHHhhhccCCCCCCCCcccchhhhhHHHHHHHHHHHHH-HHHHhhhhhhhcccch
Q 002030 722 QLCCRINTF----QHIRKELEVLEKKTVHQLRSSHSTRTDNITNGIEKRFELSAASSVEAIQQ-LSEAIAYKVIFHDLSH 796 (978)
Q Consensus 722 ~LCVrLNnL----eyil~qLd~LEk~I~~~w~~~~S~~~~~~~~~~~~~F~~ar~sl~~ai~~-l~e~ia~rvVF~Dl~~ 796 (978)
+.-|.+++| +|++.||+++.++|.+.+. +..|...-.-++.-++. |+. .++|
T Consensus 690 ~~~~p~~dl~~iDq~~L~ql~~~~~~i~e~Y~--------------~Y~f~kVv~~lq~F~~~~lSa------~Yfd--- 746 (937)
T KOG0433|consen 690 QVKFPLKDLRYIDQYMLQQLDAIVKRIIELYN--------------DYKFRKVVNDLQQFLQRNLSA------FYFD--- 746 (937)
T ss_pred cccccchhhhhhhHHHHHHHHHHHHHHHHHHH--------------hccHHHHHHHHHHHHHHHhhH------HHHH---
Confidence 356778888 7999999999999987653 34555444444333221 111 1222
Q ss_pred hhHhhhccCccccccchhhHHHHHHHHHHHHhhhhhhhhHHHHHHHHHHH
Q 002030 797 VLWDGLYVGEVSSSRIEPFLQELEHYLEIISSTVHDRVRTRVITDIMKAS 846 (978)
Q Consensus 797 ~l~d~LY~g~V~~~RI~p~L~~Ld~~L~~l~~~l~d~~r~~vv~~vmkAs 846 (978)
..=|.||-+.+.+---+.+=..|-++|..|+.++..-+ +.++-+|||..
T Consensus 747 ivKDRLY~~~~~s~~rrs~QttL~h~l~~l~~~iaPIl-P~LaeEvwq~l 795 (937)
T KOG0433|consen 747 IVKDRLYCDKVGSESRRSAQTTLHHLLHNLAHIISPIL-PHLAEEVWQHL 795 (937)
T ss_pred HHhhhhhcCCCCcHHHHHHHHHHHHHHHHHHHHHcccc-HHHHHHHHHhC
Confidence 23356999988876656666777788888888877666 78889999984
No 17
>PF10474 DUF2451: Protein of unknown function C-terminus (DUF2451); InterPro: IPR019514 This protein is found in eukaryotes but its function is not known. The N-terminal domain of some members is PF10475 from PFAM (DUF2450).
Probab=45.78 E-value=1.6e+02 Score=32.43 Aligned_cols=155 Identities=16% Similarity=0.265 Sum_probs=86.6
Q ss_pred CcccceeecccHHHHHHHHHHHHHHHHhhhccCCCCCCCCcccchhhhhHHHHHHHHHHHHHHHHHhhhhhhhcccch--
Q 002030 719 GVPQLCCRINTFQHIRKELEVLEKKTVHQLRSSHSTRTDNITNGIEKRFELSAASSVEAIQQLSEAIAYKVIFHDLSH-- 796 (978)
Q Consensus 719 ~~~~LCVrLNnLeyil~qLd~LEk~I~~~w~~~~S~~~~~~~~~~~~~F~~ar~sl~~ai~~l~e~ia~rvVF~Dl~~-- 796 (978)
+.++=+|-.-+|-++-.+++.+...+..-... +..+.+...|..+-+++.+--+.+...++.+++ |+..
T Consensus 3 gL~eRiVA~ESl~fLa~~l~~~~p~l~~lLp~-------~~~~~l~~Fy~~tv~~v~dLr~~iy~~~a~~~l--~~~~i~ 73 (234)
T PF10474_consen 3 GLAERIVAVESLSFLARQLESLRPYLESLLPP-------NKRDFLEQFYSQTVSAVPDLREPIYKCVASRLL--DLEQIL 73 (234)
T ss_pred cHhHHHHHHHHHHHHHHHHHHHHHHHHHHcCc-------cchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc--CHHHHH
Confidence 45566788889999999999998877653321 113356777778777777777777777776653 2221
Q ss_pred -----hhHhhhccCccccccchhhHHHHHHHHHHHHhhh-hhhhhHHHHHHHHHHHHHHHHHHHhCCCCC-CCCCccchH
Q 002030 797 -----VLWDGLYVGEVSSSRIEPFLQELEHYLEIISSTV-HDRVRTRVITDIMKASFEGFLLVLLAGGPS-RAFTHQDSD 869 (978)
Q Consensus 797 -----~l~d~LY~g~V~~~RI~p~L~~Ld~~L~~l~~~l-~d~~r~~vv~~vmkAs~dafL~VLL~GGps-R~Fs~~D~~ 869 (978)
+-||.=..+.=.+.-++.+++.+...=..|-++. .-+..+.+...+|..++..+..+|+.|-.. +-=|.+.-.
T Consensus 74 ~~Ia~vKWdvkev~~qhs~YVd~l~~~~~~f~~rL~~i~~~~~i~~~~~~~lw~~~i~~~~~~Lveg~s~vkKCs~eGRa 153 (234)
T PF10474_consen 74 NSIANVKWDVKEVMSQHSSYVDQLVQEFQQFSERLDEISKQGPIPPEVQNVLWDRLIFFAFETLVEGYSRVKKCSNEGRA 153 (234)
T ss_pred HHHHHcCCCCCCCCCccCHHHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHhccCCChhhHH
Confidence 2233212211123334445444443322221111 122233355566666666665666555432 445666666
Q ss_pred HHHHHHHHHHHhc
Q 002030 870 IIEEDFKFLCDLF 882 (978)
Q Consensus 870 miEeDl~~LKd~F 882 (978)
.|.-||..+..-+
T Consensus 154 lM~lD~q~~~~~l 166 (234)
T PF10474_consen 154 LMQLDFQQLQNKL 166 (234)
T ss_pred HHHHHHHHHHHHH
Confidence 7777777776666
No 18
>PHA00781 hypothetical protein
Probab=31.60 E-value=63 Score=27.64 Aligned_cols=39 Identities=28% Similarity=0.505 Sum_probs=30.6
Q ss_pred CCCCccHHHHHHHHHhhhccCCCCchhhhHHHHHHhHHhh
Q 002030 274 EGFPLNLRIYRILLEACFDVNEPTSVIEEVDEVLELIKKT 313 (978)
Q Consensus 274 dgypLN~~LYe~LL~~~FD~~de~~v~eE~dE~leliK~T 313 (978)
--||.|--||+.|+.-+-|-.-|-++-|-| -.||++|..
T Consensus 11 KKF~~t~EL~eRl~svIH~YDGEISl~EAv-G~LEllK~~ 49 (59)
T PHA00781 11 KKFPITQELYERLESVIHDYDGEISLCEAI-GTLELLKQS 49 (59)
T ss_pred ccCcchHHHHHHHHHHHHHhcccchHHHHH-hHHHHHHHH
Confidence 469999999999999999966676655444 588988853
No 19
>PF12854 PPR_1: PPR repeat
Probab=24.47 E-value=1e+02 Score=23.47 Aligned_cols=33 Identities=15% Similarity=0.358 Sum_probs=24.2
Q ss_pred CCCCccHHHHHHHHHhhhccCCCCchhhhHHHHHHhH
Q 002030 274 EGFPLNLRIYRILLEACFDVNEPTSVIEEVDEVLELI 310 (978)
Q Consensus 274 dgypLN~~LYe~LL~~~FD~~de~~v~eE~dE~leli 310 (978)
.|+++|+..|..|+.+.-. +|. +||+-++++-|
T Consensus 1 ~G~~Pd~~ty~~lI~~~Ck---~G~-~~~A~~l~~~M 33 (34)
T PF12854_consen 1 RGCEPDVVTYNTLIDGYCK---AGR-VDEAFELFDEM 33 (34)
T ss_pred CCCCCcHhHHHHHHHHHHH---CCC-HHHHHHHHHhC
Confidence 4899999999999998655 343 56666666543
No 20
>PRK05094 dsDNA-mimic protein; Reviewed
Probab=23.99 E-value=52 Score=32.10 Aligned_cols=21 Identities=24% Similarity=0.464 Sum_probs=17.6
Q ss_pred CCCCchhHHHHHHHHHHHHHh
Q 002030 44 PNISDSELRETAYEILVGACR 64 (978)
Q Consensus 44 ~~ls~~dlRetAYEi~~~~~~ 64 (978)
.-+|.|++-|+||+||+-=..
T Consensus 5 ~~~s~De~id~AYDiFLE~A~ 25 (107)
T PRK05094 5 NRLTEDETLEQAYDIFLELAA 25 (107)
T ss_pred ccCCHHHHHHHHHHHHHHhhh
Confidence 468999999999999986443
No 21
>PF08385 DHC_N1: Dynein heavy chain, N-terminal region 1; InterPro: IPR013594 Dynein heavy chains interact with other heavy chains to form dimers, and with intermediate chain-light chain complexes to form a basal cargo binding unit []. The region featured in this family includes the sequences implicated in mediating these interactions []. It is thought to be flexible and not to adopt a rigid conformation [].
Probab=21.84 E-value=1.5e+03 Score=27.48 Aligned_cols=88 Identities=13% Similarity=0.140 Sum_probs=56.1
Q ss_pred hhhhhHHHHHHHHHHHHHHHHHHHHhhhh-ccccccCCCCCCCCccHHHHHHHHHHHHHHHhcCCCCc-------cccch
Q 002030 575 AEAAIGNLAKSWINIRVDRLKEWVCRNLQ-QEVWNARANKESIAPSAVEVLRTIDETMEAFFMLPIPM-------HSVLL 646 (978)
Q Consensus 575 iE~~~~~lV~~Wi~~~~~ki~ewV~raiq-~E~W~P~s~~e~hS~SVVDvFrmi~Etvd~ff~L~~p~-------~~~lL 646 (978)
++.+.......|+++.........++.+= ...=....=...|.+.++.++|=++.-.-. ++++|. ...-+
T Consensus 443 l~~~e~~~~~~W~~~i~~~~~~~L~~~ll~~~~~~~~~l~VNfd~~l~~l~rEvr~l~~l--g~~iP~~~~~~~~~~~~l 520 (579)
T PF08385_consen 443 LDEYEKEIFEEWLNEIESNINSSLSQPLLKRRSDENGRLVVNFDPELLTLLREVRYLQSL--GFEIPEEILELYEQAEKL 520 (579)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhccccceeeeccCCCceEEEeCCHHHHHHHHHHHHHHHc--CCCCCHHHHHHHHHHHHH
Confidence 55566778889999888888666655554 111111112247888888888776654433 556663 33455
Q ss_pred HHHHHhHHHHHHHHHHHH
Q 002030 647 PELISGLDGCLQHYVLKA 664 (978)
Q Consensus 647 ~~Ls~Gid~~lq~Y~~~v 664 (978)
..+...+...++.|-..+
T Consensus 521 ~~~~~~L~~~~~~yn~i~ 538 (579)
T PF08385_consen 521 YPYAESLQEIVRFYNSII 538 (579)
T ss_pred HHHHHHHHHHHHHHHHHH
Confidence 667777777788887766
No 22
>KOG4654 consensus Uncharacterized conserved protein [Function unknown]
Probab=21.24 E-value=3.9e+02 Score=28.82 Aligned_cols=83 Identities=23% Similarity=0.295 Sum_probs=52.3
Q ss_pred HHHHHHHHHHhhhhhhhh-HHHHHHHHHHHHHHHHHHHhCCCCCCCCCccchHHHHHHHHHHHHhcccCCCCC---cHHH
Q 002030 818 ELEHYLEIISSTVHDRVR-TRVITDIMKASFEGFLLVLLAGGPSRAFTHQDSDIIEEDFKFLCDLFWSNGDGL---PADL 893 (978)
Q Consensus 818 ~Ld~~L~~l~~~l~d~~r-~~vv~~vmkAs~dafL~VLL~GGpsR~Fs~~D~~miEeDl~~LKd~F~a~GeGL---p~e~ 893 (978)
++.-+-..+|+...+++| .---.++|+|.|. ||-.+.+- ..--....|+--+-+=+--|-.+|+++||.+ |.++
T Consensus 48 c~q~Vhk~lc~~kkc~iRl~Y~W~ELW~aL~n-~L~Flmsn-e~~llak~dif~La~lIldlf~mfIs~GDafl~~pde~ 125 (252)
T KOG4654|consen 48 CFQFVHKALCSLKKCGIRLEYHWLELWRALFN-FLDFLMSN-EINLLAKEDIFRLAELILDLFAMFISNGDAFLIRPDEL 125 (252)
T ss_pred HHHHHHHHHHHHHhhcceeeeHHHHHHHHHHH-HHHHHHHh-HhhhcchhhHHHHHHHHHHHHHHHHhCCCeeeeCchHH
Confidence 344455567777777777 5556799999863 22222110 0111224556556666666778999999996 8888
Q ss_pred HHHHHHhHh
Q 002030 894 IDKFSTSVR 902 (978)
Q Consensus 894 Ve~~a~~v~ 902 (978)
+|=.++-++
T Consensus 126 ddLfYeii~ 134 (252)
T KOG4654|consen 126 DDLFYEIIH 134 (252)
T ss_pred HHHHHHHHH
Confidence 887777665
No 23
>KOG2176 consensus Exocyst complex, subunit SEC15 [Intracellular trafficking, secretion, and vesicular transport]
Probab=20.47 E-value=2e+03 Score=28.48 Aligned_cols=151 Identities=18% Similarity=0.162 Sum_probs=96.4
Q ss_pred hhhhHHHHHHHHHHHHHHHHHhhhhh-hhcccchhhHhhhccCccccccchhhHHHHHHHHHHHHhhhhhhhhHHHHHHH
Q 002030 764 EKRFELSAASSVEAIQQLSEAIAYKV-IFHDLSHVLWDGLYVGEVSSSRIEPFLQELEHYLEIISSTVHDRVRTRVITDI 842 (978)
Q Consensus 764 ~~~F~~ar~sl~~ai~~l~e~ia~rv-VF~Dl~~~l~d~LY~g~V~~~RI~p~L~~Ld~~L~~l~~~l~d~~r~~vv~~v 842 (978)
+..|-.+|+ .|-.++.+.|--|+ .|..+-..-|.+-=+..-.+.=|..++.||+......-..+.-.+...|..+.
T Consensus 586 s~~l~~sr~---~Ae~~l~~~i~~Kid~f~~l~~~dW~t~e~pq~~~~~i~e~~~yLet~~~s~~q~LP~~v~~~v~~~~ 662 (800)
T KOG2176|consen 586 STKLLASRK---LAETELIELIKLKIDDFLELIEYDWTTTEVPQGPSEYINEMLIYLETMFSSALQILPYKVAQLVCLRE 662 (800)
T ss_pred chhhhhhhh---hHHHHHHHHHhhhhHHHHHHhhccccccccCCCccHHHHHHHHHHHHHHHHHHhhCcHHHHHHHHHHH
Confidence 455555555 55556666666554 34444433344444444456778999999999999999999988888888888
Q ss_pred HHHHHHHHHHHHhCCCCCCCCCccchHHHHHHHHHHHHhcccCC--CCCcHHHHHHHHHhHhhhcc-ccccChHHHHHHH
Q 002030 843 MKASFEGFLLVLLAGGPSRAFTHQDSDIIEEDFKFLCDLFWSNG--DGLPADLIDKFSTSVRSILP-LYHNDTESLIEEF 919 (978)
Q Consensus 843 mkAs~dafL~VLL~GGpsR~Fs~~D~~miEeDl~~LKd~F~a~G--eGLp~e~Ve~~a~~v~~Vl~-L~~~~Te~LIe~f 919 (978)
+..+-..+.-.+++.-+.|.+.. -+.-++-|...+. .|.+.+ .|....+.....-.+++.++ |+.++-|.-.+.+
T Consensus 663 ~~his~~iv~llldd~ik~is~~-Ai~~fnlDv~~lE-sfa~~~p~~~~~~~~~~~~fielrQlinLL~~~~~e~y~~~~ 740 (800)
T KOG2176|consen 663 LDHISTSIVGLLLDDSIKQISMG-AITNFNLDVNYLE-SFAASPPVPPNQEGVLAKAFIELRQLINLLLLSDWETYLNDY 740 (800)
T ss_pred HHHHHHHHHHHHhCchHHHHHHH-HHHccchhHHHHH-HhccCCCCCCcccchhHHHHHHHHHHHHHHHhcCHHHhhCch
Confidence 88888888888888766666433 3555666776664 455553 33344555555556667666 4444444333333
Done!