Citrus Sinensis ID: 002031
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
|---|
Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
ID ![]() | Alignment graph ![]() | Length ![]() |
Definition ![]() |
RBH(Q2H) ![]() |
RBH(H2Q) ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 977 | 2.2.26 [Sep-21-2011] | |||||||
| Q86TW2 | 530 | Uncharacterized aarF doma | yes | no | 0.283 | 0.522 | 0.353 | 1e-42 | |
| Q9D0L4 | 525 | Uncharacterized aarF doma | yes | no | 0.274 | 0.510 | 0.343 | 3e-39 | |
| Q5ZMT7 | 519 | Uncharacterized aarF doma | yes | no | 0.288 | 0.543 | 0.331 | 4e-39 | |
| P73577 | 408 | Uncharacterized protein s | N/A | no | 0.277 | 0.664 | 0.334 | 4e-38 | |
| P73627 | 585 | Uncharacterized protein s | N/A | no | 0.336 | 0.562 | 0.296 | 6e-38 | |
| Q6INL7 | 520 | Uncharacterized aarF doma | N/A | no | 0.286 | 0.538 | 0.322 | 2e-37 | |
| Q5M7P6 | 523 | Uncharacterized aarF doma | yes | no | 0.286 | 0.535 | 0.322 | 3e-37 | |
| Q46189 | 530 | Uncharacterized protein i | N/A | no | 0.278 | 0.513 | 0.320 | 3e-37 | |
| Q55884 | 567 | Uncharacterized protein s | N/A | no | 0.297 | 0.513 | 0.333 | 5e-37 | |
| Q54P00 | 695 | Probable serine/threonine | yes | no | 0.314 | 0.441 | 0.288 | 7e-37 |
| >sp|Q86TW2|ADCK1_HUMAN Uncharacterized aarF domain-containing protein kinase 1 OS=Homo sapiens GN=ADCK1 PE=2 SV=2 | Back alignment and function desciption |
|---|
Score = 176 bits (445), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 103/291 (35%), Positives = 161/291 (55%), Gaps = 14/291 (4%)
Query: 36 KSKISALWQRAHERNAKRVLNLIIKLEGLWVKLGQYLSTRADVLPEPYISLLKQLQDSLP 95
+SK ++ + H R+A+R+ L G ++K+GQ+L +LPE Y S LK L P
Sbjct: 71 RSKSWPVFLQVHLRSARRLCELCCANRGTFIKVGQHLGALDYLLPEEYTSTLKVLHSQAP 130
Query: 96 PRPVQEVSQTIEREFGESMGGMFMDFVETPLATASIAQVHRATLVDGRQVVVKVQHQGIK 155
+QE+ Q I + G+ + +F F +TPL TAS+AQVH+A L DGR V VKVQH ++
Sbjct: 131 QSSMQEIRQVIREDLGKEIHDLFQSFDDTPLGTASLAQVHKAVLHDGRTVAVKVQHPKVR 190
Query: 156 TIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEAENTRIVSANLGCK 215
+D+ + +V + P+++F ++DE K P ELDF +E N VS L
Sbjct: 191 AQSSKDILLMEVLVLAVKQLFPEFEFMWLVDEAKKNLPLELDFLNEGRNAEKVSQML--- 247
Query: 216 NKHEDSNKKPAYEVDVLIPEVIQSSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEIT 275
+H D K P D+ S+E VL++EF+DG ++ND + +E ++ ++ +
Sbjct: 248 -RHFDFLKVPRIHWDL-------STERVLLMEFVDGGQVNDRDYMERNKIDVNEISRHLG 299
Query: 276 RAYAHQIYVDGFFNGDPHPGNFLVSKDP---PHRPILLDFGLTKKLSSSMK 323
+ Y+ I+V+GF + DPHPGN LV K P +LLD GL + L+ +
Sbjct: 300 KMYSEMIFVNGFVHCDPHPGNVLVRKHPGTGKAEIVLLDHGLYQMLTEEFR 350
|
The function of this protein is not yet clear. It is not known if it has protein kinase activity and what type of substrate it would phosphorylate (Ser, Thr or Tyr). Homo sapiens (taxid: 9606) EC: 2EC: .EC: 7EC: .EC: 1EC: 1EC: .EC: - |
| >sp|Q9D0L4|ADCK1_MOUSE Uncharacterized aarF domain-containing protein kinase 1 OS=Mus musculus GN=Adck1 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 164 bits (415), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 97/282 (34%), Positives = 154/282 (54%), Gaps = 14/282 (4%)
Query: 45 RAHERNAKRVLNLIIKLEGLWVKLGQYLSTRADVLPEPYISLLKQLQDSLPPRPVQEVSQ 104
+ H R+A+R+ L G ++K+GQ+L +LPE Y S LK L P +QEV Q
Sbjct: 73 QVHLRSARRLFELCCANRGTFIKVGQHLGALDYLLPEEYTSTLKVLHSQAPQSSMQEVRQ 132
Query: 105 TIEREFGESMGGMFMDFVETPLATASIAQVHRATLVDGRQVVVKVQHQGIKTIILEDLKN 164
I + G+ + +F+ F +TPL AS+AQVH+A L DGR V VKVQH ++ +D+
Sbjct: 133 VIREDLGKEIHDLFLSFDDTPLGAASLAQVHKAVLHDGRTVAVKVQHPKVQAQSSKDILL 192
Query: 165 AKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEAENTRIVSANLGCKNKHEDSNKK 224
+ +V + P ++F ++DE K P ELDF +E N V+ L +H D K
Sbjct: 193 MEVLVLAVKQLFPDFEFMWLVDEAKKNLPLELDFLNEGRNAEKVAHML----RHFDFLKV 248
Query: 225 PAYEVDVLIPEVIQSSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAYAHQIYV 284
P ++ S++ VL++EF++G ++ND +E ++ ++ + + Y+ I+V
Sbjct: 249 PQIHWEL-------STKRVLLMEFVEGGQVNDRAYMEKNQIDVNEISCHLGKMYSEMIFV 301
Query: 285 DGFFNGDPHPGNFLVSKDP---PHRPILLDFGLTKKLSSSMK 323
+GF + DPHPGN LV K P +LLD GL + L+ +
Sbjct: 302 NGFVHCDPHPGNVLVRKRPDTGKAEIVLLDHGLYQVLTEEFR 343
|
The function of this protein is not yet clear. It is not known if it has protein kinase activity and what type of substrate it would phosphorylate (Ser, Thr or Tyr). Mus musculus (taxid: 10090) EC: 2 EC: . EC: 7 EC: . EC: 1 EC: 1 EC: . EC: - |
| >sp|Q5ZMT7|ADCK1_CHICK Uncharacterized aarF domain-containing protein kinase 1 OS=Gallus gallus GN=ADCK1 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 164 bits (414), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 98/296 (33%), Positives = 159/296 (53%), Gaps = 14/296 (4%)
Query: 45 RAHERNAKRVLNLIIKLEGLWVKLGQYLSTRADVLPEPYISLLKQLQDSLPPRPVQEVSQ 104
+ H R+A+R+ L G ++K+GQ+L +LPE Y LK L P QE+ Q
Sbjct: 70 QVHLRSAERLRELCCANRGTFIKVGQHLGALDYLLPEEYTRTLKVLHSQAPQSTRQEIEQ 129
Query: 105 TIEREFGESMGGMFMDFVETPLATASIAQVHRATLVDGRQVVVKVQHQGIKTIILEDLKN 164
I + G+ + +F+ F +TPL AS+AQVH+A L DGR V VK+QH ++ +D+
Sbjct: 130 VIREDLGKEIKELFVSFEDTPLGAASLAQVHKAVLQDGRTVAVKIQHPKVQAQSSKDIFL 189
Query: 165 AKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEAENTRIVSANLGCKNKHEDSNKK 224
+ ++ + P ++F +++E K P ELDF +E N V+ L K+ + K
Sbjct: 190 MEVLLLVVKQIFPDFEFMWLVEEAKKNLPLELDFLNEGRNAEKVAQML----KNFEFLKV 245
Query: 225 PAYEVDVLIPEVIQSSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAYAHQIYV 284
P ++ S+ VL++EFM+G ++ND +E G++ ++ + + Y+ I+V
Sbjct: 246 PRIYWEL-------STRRVLLMEFMEGGQVNDKAYMEKNGIDVNEISRNLGKLYSEMIFV 298
Query: 285 DGFFNGDPHPGNFLVSKDPPHRP---ILLDFGLTKKLSSSMKQALAKMFFAAAEGD 337
+GF + DPHPGN LV K P ILLD GL + LS S + +++ A + D
Sbjct: 299 NGFVHCDPHPGNVLVKKCPDSGKAYIILLDHGLYQVLSESFRMDYCRLWLALIKAD 354
|
The function of this protein is not yet clear. It is not known if it has protein kinase activity and what type of substrate it would phosphorylate (Ser, Thr or Tyr). Gallus gallus (taxid: 9031) EC: 2 EC: . EC: 7 EC: . EC: 1 EC: 1 EC: . EC: - |
| >sp|P73577|Y889_SYNY3 Uncharacterized protein slr0889 OS=Synechocystis sp. (strain PCC 6803 / Kazusa) GN=slr0889 PE=3 SV=1 | Back alignment and function description |
|---|
Score = 160 bits (405), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 97/290 (33%), Positives = 154/290 (53%), Gaps = 19/290 (6%)
Query: 57 LIIKLEGLWVKLGQYLSTRADVLPEPYISLLKQLQDSLPPRPVQEVSQTIEREFGESMGG 116
++++L ++KLGQ LSTR D+LP YI+ L LQ ++PP P + ++REF + +G
Sbjct: 49 ILVELGPFYIKLGQLLSTRPDLLPPRYINALTALQSNVPPLPWSAIEDLLQREFPQPLGE 108
Query: 117 MFMDFVETPLATASIAQVHRATLVDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAE 176
F + P+A SI Q+HRA L G V +KV+ GI I+ +D K + + +A E
Sbjct: 109 TFQEIESEPIAAGSIGQIHRAVLQSGETVAIKVKRPGIDVIVEQDSLLIKDVAELLALTE 168
Query: 177 --PQYDFNPIIDEWCKEAPKELDFNSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIP 234
YD + DE+ + EL+F++EA T + NL K D N+ ++IP
Sbjct: 169 FGQNYDIVKLADEFTQTVKAELNFDTEAAYTNNLRTNLA-KTTWFDPNQ-------LVIP 220
Query: 235 EVIQ--SSETVLILEFMDGI-----RLNDCESLEAFGVNKQKVVEEITRAYAHQIYVDGF 287
+V +++ L+LE++DG+ L S + K+++ + RA+ Q+YVDGF
Sbjct: 221 KVYWELTNQKFLVLEWLDGVPILTADLTQPPSDKDIAEKKKEITTLLFRAFFQQLYVDGF 280
Query: 288 FNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSSSMKQALAKMFFAAAEGD 337
F+ DPHPGN D R L+D G+ +L +Q L +M A + D
Sbjct: 281 FHADPHPGNIFYLAD--GRLALIDCGMVGRLDPRTRQLLTEMLLAIVDLD 328
|
Synechocystis sp. (strain PCC 6803 / Kazusa) (taxid: 1111708) |
| >sp|P73627|Y1770_SYNY3 Uncharacterized protein sll1770 OS=Synechocystis sp. (strain PCC 6803 / Kazusa) GN=sll1770 PE=3 SV=1 | Back alignment and function description |
|---|
Score = 160 bits (404), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 104/351 (29%), Positives = 173/351 (49%), Gaps = 22/351 (6%)
Query: 5 NIYRRRMSVFSMAILIYLDYKAVQQREKWIKKSKISALWQRAHERNAKRVLNLIIKLEGL 64
+I RRR+ ++ + + + ++ + L QR R AK + ++ L
Sbjct: 40 SITRRRIDIWGFVLTLLYQFWLNGKKWSYAGGYTEEKLQQR-RRRQAKWIRENLLSLGPT 98
Query: 65 WVKLGQYLSTRADVLPEPYISLLKQLQDSLPPRPVQEVSQTIEREFGESMGGMFMDFVET 124
++K+GQ STR+D+ P Y+ L +LQD +P ++ + IE E G+ + ++ F
Sbjct: 99 FIKVGQLFSTRSDLFPAEYVEELSKLQDEVPAFSYEQAAGIIEEELGKPIAKLYRSFDPV 158
Query: 125 PLATASIAQVHRATLVDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWI----AWAEPQYD 180
PLA AS+ QVH+A L G VVVKVQ G+K + DL K I + W + D
Sbjct: 159 PLAAASLGQVHKAQLHTGEDVVVKVQRPGLKKLFTIDLAILKKIAQYFQNHPKWGRGR-D 217
Query: 181 FNPIIDEWCKEAPKELDFNSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVI--Q 238
+N I +E CK +E D+ E + N + ED K +P V
Sbjct: 218 WNGIYEECCKILWQETDYLREGRSADTFRRNF----RGEDWVK---------VPRVYWRY 264
Query: 239 SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAYAHQIYVDGFFNGDPHPGNFL 298
+S +L LE++ GI+++ ++LEA G+ ++++ + RAY Q+ GFF+ DPHPGN
Sbjct: 265 TSTQILTLEYLPGIKISHYDALEAAGLERKELAQLGARAYLFQLLNHGFFHADPHPGNLA 324
Query: 299 VSKDPPHRPILLDFGLTKKLSSSMKQALAKMFFAAAEGDHVALLSAFAEMG 349
VS + I DFG+ +++ K L F AE + ++++ +G
Sbjct: 325 VSPEAGEL-IFYDFGMMGEITPDTKNKLMDTLFGVAEKNAERIVNSLVALG 374
|
Synechocystis sp. (strain PCC 6803 / Kazusa) (taxid: 1111708) |
| >sp|Q6INL7|ADCK1_XENLA Uncharacterized aarF domain-containing protein kinase 1 OS=Xenopus laevis GN=adck1 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 158 bits (399), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 96/298 (32%), Positives = 159/298 (53%), Gaps = 18/298 (6%)
Query: 45 RAHERNAKRVLNLIIKLEGLWVKLGQYLSTRADVLPEPYISLLKQLQDSLPPRPVQEVSQ 104
+ H R+A R+L+L G ++K+GQ+L+ ++P Y L L P P +V Q
Sbjct: 73 QVHLRSAHRLLDLCCFNRGTFIKVGQHLAALEYLVPPEYTKTLSVLHSQAPCTPFTDVVQ 132
Query: 105 TIEREFGESMGGMFMDFVETPLATASIAQVHRATLVDGRQVVVKVQHQGIKTIILEDLKN 164
I + G+ + +F +F +TPL AS+AQVHRA L DGR+V VKVQH ++ D+
Sbjct: 133 VIREDLGKEISEVFEEFEKTPLGAASLAQVHRAVLQDGRKVAVKVQHPKVQAQSSRDILI 192
Query: 165 AKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEAENTRIVSANLGCKNKHEDSNKK 224
+ ++ + PQ++F +I+E K P ELDF +E N +S+ + +
Sbjct: 193 MEVLLHVVKKIFPQFEFMWLIEEAKKNLPLELDFQNEGRNAEKMSSIVSSFS-------- 244
Query: 225 PAYEVDVLIPEVIQ--SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAYAHQI 282
+ IP + S++ VL++E+M+G ++ND E ++ ++ KV + + Y+ I
Sbjct: 245 -----FLRIPRIYWELSTKRVLVMEYMEGGQVNDREYMKRNQIDVNKVSHALGKLYSEMI 299
Query: 283 YVDGFFNGDPHPGNFLVSKDPPH---RPILLDFGLTKKLSSSMKQALAKMFFAAAEGD 337
+V GF + DPHPGN LV ++P + ILLD GL + L+ S + ++ A D
Sbjct: 300 FVHGFVHCDPHPGNVLVRQNPENCAPEIILLDHGLYQVLTESFRLDYCSLWQALIAAD 357
|
The function of this protein is not yet clear. It is not known if it has protein kinase activity and what type of substrate it would phosphorylate (Ser, Thr or Tyr). Xenopus laevis (taxid: 8355) EC: 2 EC: . EC: 7 EC: . EC: 1 EC: 1 EC: . EC: - |
| >sp|Q5M7P6|ADCK1_XENTR Uncharacterized aarF domain-containing protein kinase 1 OS=Xenopus tropicalis GN=adck1 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 157 bits (398), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 96/298 (32%), Positives = 157/298 (52%), Gaps = 18/298 (6%)
Query: 45 RAHERNAKRVLNLIIKLEGLWVKLGQYLSTRADVLPEPYISLLKQLQDSLPPRPVQEVSQ 104
+ H R+A R+L+L G ++K+GQ+L ++P Y L L P P +V Q
Sbjct: 73 QVHFRSAHRLLDLCCANRGTFIKVGQHLGALEYLVPPEYTKTLSVLHSQAPCTPFPDVVQ 132
Query: 105 TIEREFGESMGGMFMDFVETPLATASIAQVHRATLVDGRQVVVKVQHQGIKTIILEDLKN 164
I + G+ + +F++F E PL AS+AQVHRA L DGR+V VKVQH ++ D+
Sbjct: 133 VIREDLGKEISEVFVEFEEKPLGAASLAQVHRAVLQDGRKVAVKVQHPKVQAQSARDILL 192
Query: 165 AKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEAENTRIVSANLGCKNKHEDSNKK 224
+ ++ + PQ++F +I+E K P ELDF +E N +SA + +
Sbjct: 193 MEVLLHAVKKIFPQFEFMWLIEEAKKNLPLELDFENEGRNAEKMSAIVSSFS-------- 244
Query: 225 PAYEVDVLIPEVIQ--SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAYAHQI 282
+ IP + S++ VL++E+M+G ++ND E ++ ++ +V + + Y+ I
Sbjct: 245 -----FLRIPRIYWELSTKRVLVMEYMEGGQVNDREYMKRNQIDINQVARALGQLYSEMI 299
Query: 283 YVDGFFNGDPHPGNFLVSKDPPH---RPILLDFGLTKKLSSSMKQALAKMFFAAAEGD 337
+V GF + DPHPGN LV ++P ILLD GL + L+ S + ++ A D
Sbjct: 300 FVHGFVHCDPHPGNVLVRQNPETLVPEIILLDHGLYQVLTESFRLDYCSLWQALIAAD 357
|
The function of this protein is not yet clear. It is not known if it has protein kinase activity and what type of substrate it would phosphorylate (Ser, Thr or Tyr). Xenopus tropicalis (taxid: 8364) EC: 2 EC: . EC: 7 EC: . EC: 1 EC: 1 EC: . EC: - |
| >sp|Q46189|YHG1_CLOPA Uncharacterized protein in hydrogenase 1 5'region (Fragment) OS=Clostridium pasteurianum PE=3 SV=1 | Back alignment and function description |
|---|
Score = 157 bits (398), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 93/290 (32%), Positives = 159/290 (54%), Gaps = 18/290 (6%)
Query: 65 WVKLGQYLSTRADVLPEPYISLLKQLQDSLPPRPVQEVSQTIEREFGESMGGMFMDFVET 124
++K+GQ LSTR D+LP PYI L +LQ+++PP ++ E ++ F+ F +T
Sbjct: 47 FIKIGQILSTRPDLLPLPYIKELSKLQNNVPPENFIDIENLFFEELSSTIDNTFLYFDKT 106
Query: 125 PLATASIAQVHRATLVDGRQVVVKVQHQGIKTIILEDLKNAKSIVDW--IAWAEPQYDFN 182
P+ +ASIAQVH A L DGR V+VK+Q GI ++ DL K +++ + + D
Sbjct: 107 PIGSASIAQVHDAILKDGRFVIVKIQRPGIAEMMKTDLSIIKKLLNITKTKFTDALIDPK 166
Query: 183 PIIDEWCKEAPKELDFNSEAENTRIVSANLGCKNKHEDSN-KKPAYEVDVLIPEVIQSSE 241
IDE +ELDF +E N + K +ED + Y +D L +E
Sbjct: 167 EAIDELFISTTQELDFINEINNIK------KFKKLNEDVKFVRTPYTIDKL------CTE 214
Query: 242 TVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAYAHQIYVDGFFNGDPHPGNFLVSK 301
++++E + GI++++ + L G + +++ +++T +Y Q++ DGFF+GDPHPGN L+ +
Sbjct: 215 KIIVMEKIVGIKIDNLKKLLNEGYDLEELGKKLTLSYFKQVFQDGFFHGDPHPGNLLIRE 274
Query: 302 DPPHRPILLDFGLTKKLSSSMKQALAKMFFAAAEGDHVALLSAFAEMGLR 351
+ +DFG+ +S S+K +L A A D ++S +G++
Sbjct: 275 N---HICYIDFGIMGTISKSLKISLNDAILAVAYHDVNKMISVIMSIGVK 321
|
Clostridium pasteurianum (taxid: 1501) |
| >sp|Q55884|Y095_SYNY3 Uncharacterized protein sll0095 OS=Synechocystis sp. (strain PCC 6803 / Kazusa) GN=sll0095 PE=3 SV=1 | Back alignment and function description |
|---|
Score = 157 bits (396), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 106/318 (33%), Positives = 158/318 (49%), Gaps = 27/318 (8%)
Query: 45 RAHERNAKRVLNLIIKLEGL---WVKLGQYLSTRADVLPEPYISLLKQLQDSLPPRPVQE 101
R+ +R +R L+ +L L ++K+GQ LSTRAD++P YI QLQD +PP ++
Sbjct: 49 RSAQRRYRRAQWLVQQLLYLGPTFIKIGQSLSTRADIIPAEYIEAFTQLQDRVPPFDSRQ 108
Query: 102 VSQTIEREFGESMGGMFMDFVETPLATASIAQVHRATLVDGRQVVVKVQHQGIKTIILED 161
IE+E ++ +F F TPLA+AS+ QVHRA L G VVVKVQ G+ +++ D
Sbjct: 109 AIAVIEQELHGAIDEIFQQFEVTPLASASLGQVHRAVLPTGEAVVVKVQRPGLDSLLNLD 168
Query: 162 -------LKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEAENTRIVSANLGC 214
L+ AK + +Y+ I E+ E+D+ E +N N
Sbjct: 169 FELLHQTLRLAKRWLPGFRRLAQKYEIEAIYQEFFSLLFLEIDYIHEGKNAERFRQNFAD 228
Query: 215 KNKHEDSNKKPAYEVDVLIPEVI--QSSETVLILEFMDGIRLNDCESLEAFGVNKQKVVE 272
+ V +PE+ ++ VL LE++ GI+++D ++LE G+N V++
Sbjct: 229 YPR-------------VRVPEIYWQYTTRMVLTLEYLPGIKVDDRQALETAGINLDLVIQ 275
Query: 273 EITRAYAHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSSSMKQALAKMFFA 332
AY Q+ VDGFF DPHPGN V D I DFG ++ K + + FFA
Sbjct: 276 TGICAYLKQLLVDGFFQSDPHPGNMAV--DSQGDLIFYDFGTMAEVKIIAKDQMVQTFFA 333
Query: 333 AAEGDHVALLSAFAEMGL 350
D +L A MGL
Sbjct: 334 VLRKDTNQVLEALIYMGL 351
|
Synechocystis sp. (strain PCC 6803 / Kazusa) (taxid: 1111708) |
| >sp|Q54P00|ABKD_DICDI Probable serine/threonine-protein kinase abkD OS=Dictyostelium discoideum GN=abkD PE=2 SV=1 | Back alignment and function description |
|---|
Score = 156 bits (395), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 97/336 (28%), Positives = 170/336 (50%), Gaps = 29/336 (8%)
Query: 5 NIYRRRMSVFSMAILIYLDYKAV----QQREKWIKKSKISALWQRAHERNAKRVLNLIIK 60
N+ R A I ++YK + ++ ++++KSKI H+ +A +L+L +
Sbjct: 204 NVIVRFYRAMKCATKIMINYKILSYTPEKSSEYLEKSKI------CHQESADLILDLCLT 257
Query: 61 LEGLWVKLGQYLSTRADVLPEPYISLLKQLQDSLPPRPVQEVSQTIEREFGESMGGMFMD 120
GL++K GQY+++ +LP Y L LQD P R EV ++ G + F D
Sbjct: 258 NGGLYIKAGQYIASLNHILPIQYTKTLSVLQDQAPWRDFYEVESVFLKDLGNAPNHYFSD 317
Query: 121 FVETPLATASIAQVHRATLVDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYD 180
F P+A AS+AQVHRA +G +V VKVQ+ ++ D+ ++ + A P ++
Sbjct: 318 FDRLPIAAASLAQVHRAITKEGEEVAVKVQYVDLQRNFDGDIFTHNVLLTLVNMAFPDFE 377
Query: 181 FNPIIDEWCKEAPKELDFNSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-- 238
FN + +E KELDF+ EA+N + +L N + IP+V +
Sbjct: 378 FNWMAEEMKNVLIKELDFSQEADNAERAAQDLSSNN-------------NAYIPKVFRPY 424
Query: 239 SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAYAHQIYVDGFFNGDPHPGNFL 298
SS+ +L EF+ G ++N+ +++ + G++++ V + QI++ F + DPH GN L
Sbjct: 425 SSKRILTTEFIHGCKINNVQAIRSMGLSEKTVSQRFMEIMCEQIFIHAFVHVDPHAGNVL 484
Query: 299 VSKDP--PHRP--ILLDFGLTKKLSSSMKQALAKMF 330
V + P P++P +LLD GL ++ + ++
Sbjct: 485 VRQHPNHPNQPQIVLLDHGLYREYDEEFRLNFCNLY 520
|
Dictyostelium discoideum (taxid: 44689) EC: 2 EC: . EC: 7 EC: . EC: 1 EC: 1 EC: . EC: - |
Close Homologs in the Non-Redundant Database Detected by BLAST 
Original result of BLAST against Nonredundant Database
GI ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 977 | ||||||
| 225429826 | 978 | PREDICTED: uncharacterized protein LOC10 | 0.989 | 0.988 | 0.733 | 0.0 | |
| 255574137 | 965 | Ubiquinone biosynthesis protein coq-8, p | 0.987 | 1.0 | 0.733 | 0.0 | |
| 297812683 | 1011 | ABC1 family protein [Arabidopsis lyrata | 0.984 | 0.951 | 0.703 | 0.0 | |
| 18420844 | 1009 | ABC1 family protein [Arabidopsis thalian | 0.983 | 0.952 | 0.704 | 0.0 | |
| 224115612 | 987 | predicted protein [Populus trichocarpa] | 0.992 | 0.982 | 0.707 | 0.0 | |
| 334187920 | 1040 | ABC1 family protein [Arabidopsis thalian | 0.983 | 0.924 | 0.682 | 0.0 | |
| 356552616 | 965 | PREDICTED: uncharacterized protein LOC10 | 0.981 | 0.993 | 0.706 | 0.0 | |
| 356563711 | 966 | PREDICTED: uncharacterized protein LOC10 | 0.981 | 0.992 | 0.699 | 0.0 | |
| 224121392 | 972 | predicted protein [Populus trichocarpa] | 0.972 | 0.977 | 0.722 | 0.0 | |
| 356563713 | 994 | PREDICTED: uncharacterized protein LOC10 | 0.981 | 0.964 | 0.679 | 0.0 |
| >gi|225429826|ref|XP_002283043.1| PREDICTED: uncharacterized protein LOC100242392 [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 1487 bits (3850), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 725/988 (73%), Positives = 839/988 (84%), Gaps = 21/988 (2%)
Query: 1 MGWGNIYRRRMSVFSMAILIYLDYKAVQQREKWIKKSKISALWQRAHERNAKRVLNLIIK 60
MGWGNIYRRR+ VF++A +IYLDYKA+QQREKW KSK +ALW+RAHERNAKRVLNLI++
Sbjct: 1 MGWGNIYRRRVKVFTVAFIIYLDYKALQQREKWSSKSKKAALWERAHERNAKRVLNLIVE 60
Query: 61 LEGLWVKLGQYLSTRADVLPEPYISLLKQLQDSLPPRPVQEVSQTIEREFGESMGGMFMD 120
LEGLWVKLGQYLSTRADVLPE YISLLKQLQDSLPPRP++EV +TIE+E G+SM +F
Sbjct: 61 LEGLWVKLGQYLSTRADVLPEAYISLLKQLQDSLPPRPLKEVCRTIEKELGKSMDDLFSS 120
Query: 121 FVETPLATASIAQVHRATLVDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYD 180
FV+ PLATASIAQVHRATL G VVVKVQH+GIKT+ILEDLKNAKSI DWIAWAEPQYD
Sbjct: 121 FVDAPLATASIAQVHRATLRSGEDVVVKVQHEGIKTVILEDLKNAKSIADWIAWAEPQYD 180
Query: 181 FNPIIDEWCKEAPKELDFNSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQSS 240
FNP+IDEWC+EAPKELDF+ EAENTR VS NLGCKNK++ P +VDVLIPE+IQS+
Sbjct: 181 FNPMIDEWCREAPKELDFDHEAENTRKVSRNLGCKNKND---VMPGNQVDVLIPEIIQST 237
Query: 241 ETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAYAHQIYVDGFFNGDPHPGNFLVS 300
E VLILE+MDG+RLNDCESL+AFG++KQK+VEEITRAYAHQIYVDGFFNGDPHPGNFLVS
Sbjct: 238 EKVLILEYMDGVRLNDCESLKAFGIDKQKLVEEITRAYAHQIYVDGFFNGDPHPGNFLVS 297
Query: 301 KDPPHRPILLDFGLTKKLSSSMKQALAKMFFAAAEGDHVALLSAFAEMGLRLRLDVPEQA 360
K+PPHRP+LLDFGLTK LSSSMKQALAK+F A+AEGDHVALLSA +EMGLRLRLD+P+QA
Sbjct: 298 KEPPHRPVLLDFGLTKSLSSSMKQALAKLFLASAEGDHVALLSALSEMGLRLRLDLPDQA 357
Query: 361 MEVSTLFFRTSAPANEAFETVKNLSEQRAKNLKVIQEKMKLNQKEVKRFNPVDAFPGDIV 420
MEV+T+FFR+S PA+EA E +++LS+QR KN+KVIQEKMKLN+KEVKRFNPVDAFPGDIV
Sbjct: 358 MEVATVFFRSSTPASEALENMRSLSKQRTKNMKVIQEKMKLNKKEVKRFNPVDAFPGDIV 417
Query: 421 IFSRVLNLLRGLSSTMNVRIVYLDIMRPFAEYVLQVGINKEPSVSAEWIYSKPIHSDVEA 480
IF+RVLNLLRGLS+ M+VRI YLDIMRPFAE VLQ INK P+V+++WIY P+HSDVE
Sbjct: 418 IFARVLNLLRGLSTIMDVRISYLDIMRPFAESVLQGYINKGPAVNSQWIYDTPVHSDVET 477
Query: 481 KLRDFLVELGNDGKILGIQVCAYKDGEVIIDTSAGMLGRYDPRPVQPDSLFPVFSVTKGI 540
KLR LVELGND KILGIQVCAYKDGEVIIDT+AG+LGRYDPRPVQPDSLFPVFSVTKGI
Sbjct: 478 KLRRLLVELGNDDKILGIQVCAYKDGEVIIDTAAGVLGRYDPRPVQPDSLFPVFSVTKGI 537
Query: 541 TAGMLHWLVDNGKLKLEENIANIWPEFKSNGKDLIKVHHVLNHTSGLHNVSVDLSSENPL 600
TAGM+HWLVD GKLKL E+IANIWPEF SN K+LIKVHHVL HTSGL N D+S ENPL
Sbjct: 538 TAGMIHWLVDKGKLKLGESIANIWPEFGSNKKELIKVHHVLTHTSGLQNALGDISRENPL 597
Query: 601 LICDWDECLNRIALSAPETEPGQEQLYHYLSFGWLCGGIIERASGKKFQEILEEGIIQPL 660
L+C+WDECLNRIA+S PETEPG EQLYHYLSFGWLCGGIIE ASGKKFQEILEE I+PL
Sbjct: 598 LMCEWDECLNRIAMSVPETEPGHEQLYHYLSFGWLCGGIIEHASGKKFQEILEEAFIRPL 657
Query: 661 SIDGELYIGIPPGVESRLASLTIDTDDLNKVSGINNRPDLRLPSSFQPDKISQLAAITPA 720
I+GELY+GIPPGVESRLA+LT+DTDD+ K+S +NRPD LP SF + IS+L + PA
Sbjct: 658 QIEGELYVGIPPGVESRLATLTVDTDDVRKLSVYSNRPD--LPVSFTSN-ISELVTVLPA 714
Query: 721 VFNMLNIRRAIIPAANGHCSARALARYYAALADGGVVPPPHSRLSKPPLGSHPHIPKFPS 780
+FN LNIRR+IIP+ANGHCSARALARYYA LADGG++PPPHS SKPPLGSHPHIP FPS
Sbjct: 715 LFNTLNIRRSIIPSANGHCSARALARYYATLADGGILPPPHSTSSKPPLGSHPHIPSFPS 774
Query: 781 HETSKKQKGTKKELLAALKNKTN----NSEHGHKYTKDLEGGSHIRTASGDTYARL---- 832
+TSKKQKG K + +AA NKTN N++ G + +KD + R A D + R
Sbjct: 775 QKTSKKQKGGKSKDVAAASNKTNIHEQNTDDGSRSSKD---SCYNRKARCDNHGRFPHDS 831
Query: 833 --INIETSSSNTSTTDSISNTDEPQSSNVRKIFNNPRIHDAFLGVGDYGDLALPNGRFGL 890
+ T S+N S N D+ S+ KIF+NPRIHDAFLGVG+Y + P+G+FGL
Sbjct: 832 GSSSESTVSNNGHRIGSTENGDDSPKSDT-KIFSNPRIHDAFLGVGEYENYGFPSGKFGL 890
Query: 891 GFKRYNTRDGSYIGFGHSGMGGSTGFCDVNNRFAIAVTLNKMSFGATTGRIIHFVCSELN 950
GFK +++DG+ +GFGHSGMGGSTG+CD+NN+FAIAVTLNKMS G TG+II F+CSELN
Sbjct: 891 GFKSCSSKDGTLLGFGHSGMGGSTGYCDINNKFAIAVTLNKMSLGGVTGKIIQFICSELN 950
Query: 951 LPVPEDYLRFAEVEHDTPQ-DLGQPLIN 977
LPVPEDY RF+ E Q ++ +PLIN
Sbjct: 951 LPVPEDYSRFSGSEKPEEQSNVWRPLIN 978
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|255574137|ref|XP_002527984.1| Ubiquinone biosynthesis protein coq-8, putative [Ricinus communis] gi|223532610|gb|EEF34396.1| Ubiquinone biosynthesis protein coq-8, putative [Ricinus communis] | Back alignment and taxonomy information |
|---|
Score = 1469 bits (3802), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 717/977 (73%), Positives = 845/977 (86%), Gaps = 12/977 (1%)
Query: 1 MGWGNIYRRRMSVFSMAILIYLDYKAVQQREKWIKKSKISALWQRAHERNAKRVLNLIIK 60
MGWGNIY+RR+ VF++AI+IYLDYKA+QQR+KW KSK +ALW++AHERNAKRVLNLII+
Sbjct: 1 MGWGNIYKRRVRVFAVAIMIYLDYKAIQQRDKWTIKSKKTALWEKAHERNAKRVLNLIIE 60
Query: 61 LEGLWVKLGQYLSTRADVLPEPYISLLKQLQDSLPPRPVQEVSQTIEREFGESMGGMFMD 120
LEGLWVKLGQYLSTRADVLP YISLLK+LQDSLPPRP+QEV QTI++E G+S+ +F
Sbjct: 61 LEGLWVKLGQYLSTRADVLPHAYISLLKKLQDSLPPRPLQEVCQTIQKELGKSLDDLFSY 120
Query: 121 FVETPLATASIAQVHRATLVDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYD 180
F TPLATASIAQVHRATL++G++VVVKVQH+GIKTIILEDLKNAKSIVDWIAWAEPQYD
Sbjct: 121 FDRTPLATASIAQVHRATLINGQEVVVKVQHEGIKTIILEDLKNAKSIVDWIAWAEPQYD 180
Query: 181 FNPIIDEWCKEAPKELDFNSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQSS 240
FNP+IDEWCKEAPKELDFN EAENTRIVS+NLGC+NK++DS + A +VDVLIPEVIQSS
Sbjct: 181 FNPMIDEWCKEAPKELDFNIEAENTRIVSSNLGCRNKNKDS--RHANQVDVLIPEVIQSS 238
Query: 241 ETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAYAHQIYVDGFFNGDPHPGNFLVS 300
E VLILE+MDGIRLND ESLEA+GV+KQKVVEEITRAYA+QIY+DGFFNGDPHPGNFLVS
Sbjct: 239 EKVLILEYMDGIRLNDLESLEAYGVDKQKVVEEITRAYAYQIYIDGFFNGDPHPGNFLVS 298
Query: 301 KDPPHRPILLDFGLTKKLSSSMKQALAKMFFAAAEGDHVALLSAFAEMGLRLRLDVPEQA 360
KDP HRP+LLDFGLTKK+SSS+KQALAKMF A+ EGDHVALLSAFAEMGL+LRLD+PEQA
Sbjct: 299 KDPQHRPVLLDFGLTKKISSSIKQALAKMFLASVEGDHVALLSAFAEMGLKLRLDLPEQA 358
Query: 361 MEVSTLFFRTSAPANEAFETVKNLSEQRAKNLKVIQEKMKLNQKEVKRFNPVDAFPGDIV 420
MEV+ +FFRTS PANEAFE +K+L+EQR+KN+KVIQEKMKL+QKEVKRFNPVDAFPGDIV
Sbjct: 359 MEVTNVFFRTSTPANEAFENMKSLAEQRSKNMKVIQEKMKLSQKEVKRFNPVDAFPGDIV 418
Query: 421 IFSRVLNLLRGLSSTMNVRIVYLDIMRPFAEYVLQVGINKEPSVSAEWIYSKPIHSDVEA 480
IFSRVLNLLRGLSSTMNVRI+Y +IMRPFAE+ LQ INK P+V+A+WI++ P+HSDVE
Sbjct: 419 IFSRVLNLLRGLSSTMNVRIIYQEIMRPFAEFALQGNINKGPTVNAQWIHNTPVHSDVET 478
Query: 481 KLRDFLVELGNDGKILGIQVCAYKDGEVIIDTSAGMLGRYDPRPVQPDSLFPVFSVTKGI 540
KLR L+ELGN+ KILGIQVCAYKDGEVIIDT+AG+LGRYDPRPVQPDSLFPVFSVTKGI
Sbjct: 479 KLRQLLIELGNEDKILGIQVCAYKDGEVIIDTAAGVLGRYDPRPVQPDSLFPVFSVTKGI 538
Query: 541 TAGMLHWLVDNGKLKLEENIANIWPEFKSNGKDLIKVHHVLNHTSGLHNVSVDLSSENPL 600
TAGMLHWLVDNGK+KL++++ANIWP+F ++GKDLIKV+HVLNHTSGLHN +L ENP+
Sbjct: 539 TAGMLHWLVDNGKVKLDDSVANIWPQFGTSGKDLIKVYHVLNHTSGLHNALSNLREENPM 598
Query: 601 LICDWDECLNRIALSAPETEPGQEQLYHYLSFGWLCGGIIERASGKKFQEILEEGIIQPL 660
+C+WDECLN+I LS PETEPG+EQLYHYLSFGWLCGGIIE ASGK+FQEILEE II+PL
Sbjct: 599 QLCNWDECLNQICLSVPETEPGKEQLYHYLSFGWLCGGIIEHASGKRFQEILEEAIIRPL 658
Query: 661 SIDGELYIGIPPGVESRLASLTIDTDDLNKVSGINNRPDLRLPSSFQPDKISQLAAITPA 720
I+GELY+GIPPGVESRLA+L +D +DL+K+ + +RPD LPS+FQP I+QL PA
Sbjct: 659 KIEGELYVGIPPGVESRLATLMVDMNDLSKLVEMRSRPD--LPSTFQPSNITQLLTTVPA 716
Query: 721 VFNMLNIRRAIIPAANGHCSARALARYYAALADGGVVPPPHSRLSKPPLGSHPHIPKFPS 780
+FNML +RRA IPAANGHCSARALARYYAALADGG+ PPPHS +KP LGSHPHIPKF S
Sbjct: 717 LFNMLIVRRATIPAANGHCSARALARYYAALADGGLTPPPHSSFTKPALGSHPHIPKFSS 776
Query: 781 HETSKKQKGTKKELLAALKNKTNNSEHGHKYTKDLEGGSHIRTASGDTYARLINIETSSS 840
+T KKQKG +KE+ K ++ S++ + KDLE G++ D Y RL SS
Sbjct: 777 EKTPKKQKGKRKEVTTTSKKRS--SDYSRNHNKDLEEGNN----GNDGYTRLAT--DGSS 828
Query: 841 NTSTTDSISNTDEPQSSNVRKIFNNPRIHDAFLGVGDYGDLALPNGRFGLGFKRYNTRDG 900
+ S DS ++ D + NV +IF +PRIHDAFLGVG+Y +LA+PNG+FGLGF+R ++ DG
Sbjct: 829 SASAADSFASGDGNKRDNVTRIFIDPRIHDAFLGVGEYENLAVPNGKFGLGFRRNSSNDG 888
Query: 901 SYIGFGHSGMGGSTGFCDVNNRFAIAVTLNKMSFGATTGRIIHFVCSELNLPVPEDYLRF 960
S IGFGHSGMGGSTGFCD+ NRFAIAVT+NK+S G T +I VCSE+N+P+PE+
Sbjct: 889 SLIGFGHSGMGGSTGFCDIKNRFAIAVTVNKLSVGFVTRKIAELVCSEVNVPLPEELSIS 948
Query: 961 AEVEHDTPQDLGQPLIN 977
E D ++G+PLIN
Sbjct: 949 GERGPDLELNIGKPLIN 965
|
Source: Ricinus communis Species: Ricinus communis Genus: Ricinus Family: Euphorbiaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|297812683|ref|XP_002874225.1| ABC1 family protein [Arabidopsis lyrata subsp. lyrata] gi|297320062|gb|EFH50484.1| ABC1 family protein [Arabidopsis lyrata subsp. lyrata] | Back alignment and taxonomy information |
|---|
Score = 1439 bits (3725), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 689/979 (70%), Positives = 818/979 (83%), Gaps = 17/979 (1%)
Query: 1 MGWGNIYRRRMSVFSMAILIYLDYKAVQQREKWIKKSKISALWQRAHERNAKRVLNLIIK 60
MG GNIYRRRM VFS+AILIYLDYK VQQ+EKWIK SK+ ALW +AH+RNAKRVLNLI++
Sbjct: 48 MGLGNIYRRRMKVFSVAILIYLDYKGVQQKEKWIKNSKVPALWDKAHDRNAKRVLNLIVE 107
Query: 61 LEGLWVKLGQYLSTRADVLPEPYISLLKQLQDSLPPRPVQEVSQTIEREFGESMGGMFMD 120
LEGLWVKLGQYLSTRADVLP+ YISLL QLQDSLPPRP+QEV +TIERE G SM +F D
Sbjct: 108 LEGLWVKLGQYLSTRADVLPQAYISLLTQLQDSLPPRPLQEVCRTIERELGHSMDVLFTD 167
Query: 121 FVETPLATASIAQVHRATLVDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYD 180
FV+ PLATASIAQVHRATL +G+ VVVKVQH GI+ IILEDLKNAKSIVDWIAWAEPQY+
Sbjct: 168 FVDEPLATASIAQVHRATLANGQDVVVKVQHDGIRAIILEDLKNAKSIVDWIAWAEPQYN 227
Query: 181 FNPIIDEWCKEAPKELDFNSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQSS 240
FNP+IDEWCKEAP+ELDFN EAENTR VS NLGCK +++ + VDVLIP++IQSS
Sbjct: 228 FNPMIDEWCKEAPRELDFNIEAENTRAVSKNLGCKKTYDEV--RSDNRVDVLIPDIIQSS 285
Query: 241 ETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAYAHQIYVDGFFNGDPHPGNFLVS 300
E+VLILE+MDGIRLND ESL+AFGV+KQK+VEEITRAYAHQI+VDGFFNGDPHPGNFLVS
Sbjct: 286 ESVLILEYMDGIRLNDVESLDAFGVDKQKIVEEITRAYAHQIFVDGFFNGDPHPGNFLVS 345
Query: 301 KDPPHRPILLDFGLTKKLSSSMKQALAKMFFAAAEGDHVALLSAFAEMGLRLRLDVPEQA 360
K+P H PILLDFGLTKK+S S+KQALAKMF A+AEGD VALLSAFAEMGL+LRLD+P+QA
Sbjct: 346 KEPQHLPILLDFGLTKKISHSLKQALAKMFLASAEGDQVALLSAFAEMGLKLRLDMPDQA 405
Query: 361 MEVSTLFFRTSAPANEAFETVKNLSEQRAKNLKVIQEKMKLNQKEVKRFNPVDAFPGDIV 420
M V+ LFFR+S P+NEA +T+K L++QR +N+KVIQEKM+LNQKEVKRFNP+DAFPGDIV
Sbjct: 406 MSVAGLFFRSSTPSNEAMKTLKTLNDQRVQNMKVIQEKMQLNQKEVKRFNPIDAFPGDIV 465
Query: 421 IFSRVLNLLRGLSSTMNVRIVYLDIMRPFAEYVLQVGINKEPSVSAEWIYSKPIHSDVEA 480
IF+RV+NLLRGLSSTMNVRIVYLDIMRPFAE VL I++ P+V A WI+ PIHSDVE+
Sbjct: 466 IFARVINLLRGLSSTMNVRIVYLDIMRPFAESVLLGSISRGPTVDAHWIHESPIHSDVES 525
Query: 481 KLRDFLVELGNDGKILGIQVCAYKDGEVIIDTSAGMLGRYDPRPVQPDSLFPVFSVTKGI 540
K+R L ELG+ KILGIQVCAYKDG+VIIDT+AG+LGRYDPRPVQPDSLFPVFSVTKG+
Sbjct: 526 KVRKLLAELGSIQKILGIQVCAYKDGKVIIDTAAGVLGRYDPRPVQPDSLFPVFSVTKGV 585
Query: 541 TAGMLHWLVDNGKLKLEENIANIWPEFKSNGKDLIKVHHVLNHTSGLHNVSVDLSSENPL 600
TAGM+HWLVD KL+L++ +ANIWP F SNGKD IKV+HVLNHTSG+HN + D ENPL
Sbjct: 586 TAGMIHWLVDKRKLQLDQTVANIWPGFGSNGKDTIKVNHVLNHTSGMHN-AFDPVGENPL 644
Query: 601 LICDWDECLNRIALSAPETEPGQEQLYHYLSFGWLCGGIIERASGKKFQEILEEGIIQPL 660
LICDWDECL RIA S+PETEPG +Q YHYL+FGWLCGGI+E ASGKKFQEILEE I++PL
Sbjct: 645 LICDWDECLKRIANSSPETEPGNQQFYHYLTFGWLCGGILEYASGKKFQEILEESIVKPL 704
Query: 661 SIDGELYIGIPPGVESRLASLTIDTDDLNKVSGINNRPDLRLPSSFQPDKISQLAAITPA 720
IDGELYIGIPPGVESRLA+LT+DTD+++K+S I ++P+ LPS+FQPDKI QLA P
Sbjct: 705 KIDGELYIGIPPGVESRLATLTLDTDEMSKLSSIASQPE--LPSTFQPDKILQLATNLPV 762
Query: 721 VFNMLNIRRAIIPAANGHCSARALARYYAALADGGVVPPPHSRLSKPPLGSHPHIPKFPS 780
+FN LN+RRAIIPAANGHCSARALARYYA LADGG+VPPPHS LS+PPLGSH H+PKF S
Sbjct: 763 LFNTLNVRRAIIPAANGHCSARALARYYATLADGGLVPPPHSSLSQPPLGSHTHVPKFTS 822
Query: 781 -HETSKKQKGTKKELLAALKNKTNNSEHGHKYT-KDLEGGSHIRTASGDTYARLINIETS 838
+T+KK+K KE+ A K K+ + + Y K ++ ++ ARL++ +
Sbjct: 823 LKDTTKKRKS--KEMAATEKRKSKDHQERRLYDGKQFTSAGSSGESNTESLARLVDTSSY 880
Query: 839 SSNTSTTDSISNTDEPQSSNVRKIFNNPRIHDAFLGVGDYGDLALPNGRFGLGFKRYNTR 898
+ T N+D+ Q ++ +F+NP IHDAF+G GDY L +P+G+FGLGFKR ++
Sbjct: 881 AGKTEI-----NSDDHQ-HDIHNLFSNPSIHDAFMGAGDYSGLVVPDGKFGLGFKRVISQ 934
Query: 899 DGSYIGFGHSGMGGSTGFCDVNNRFAIAVTLNKMSFGATTGRIIHFVCSELNLPVPEDYL 958
DGS +GFGHSGMGGSTGFCD+ NRF+IAVTLNKMS G T +I+ VCSELN+P+P+D+
Sbjct: 935 DGSLVGFGHSGMGGSTGFCDIKNRFSIAVTLNKMSMGGVTAKIVKLVCSELNIPLPKDFS 994
Query: 959 RFAEVEHDTPQDLGQPLIN 977
+ D+ +G PLIN
Sbjct: 995 LSTDTGPDS--QMGTPLIN 1011
|
Source: Arabidopsis lyrata subsp. lyrata Species: Arabidopsis lyrata Genus: Arabidopsis Family: Brassicaceae Order: Brassicales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|18420844|ref|NP_568458.1| ABC1 family protein [Arabidopsis thaliana] gi|16649083|gb|AAL24393.1| Unknown protein [Arabidopsis thaliana] gi|33589758|gb|AAQ22645.1| At5g24810/F6A4.20 [Arabidopsis thaliana] gi|332005981|gb|AED93364.1| ABC1 family protein [Arabidopsis thaliana] | Back alignment and taxonomy information |
|---|
Score = 1437 bits (3719), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 689/978 (70%), Positives = 821/978 (83%), Gaps = 17/978 (1%)
Query: 1 MGWGNIYRRRMSVFSMAILIYLDYKAVQQREKWIKKSKISALWQRAHERNAKRVLNLIIK 60
MG GNIYRRRM VFS+AILIYLDYK VQQ+EKWIKKSK+ ALW +AH+RNAKRVLNLI++
Sbjct: 48 MGLGNIYRRRMKVFSIAILIYLDYKGVQQKEKWIKKSKVPALWDKAHDRNAKRVLNLIVE 107
Query: 61 LEGLWVKLGQYLSTRADVLPEPYISLLKQLQDSLPPRPVQEVSQTIEREFGESMGGMFMD 120
LEGLWVKLGQYLSTRADVLP+ YISLL QLQDSLPPRP+QEV +TIERE G SM +F D
Sbjct: 108 LEGLWVKLGQYLSTRADVLPQAYISLLTQLQDSLPPRPLQEVCRTIERELGNSMDVLFTD 167
Query: 121 FVETPLATASIAQVHRATLVDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYD 180
FV+ PLATASIAQVHRATL +G+ VVVKVQH GI+ IILEDLKNAKSIVDWIAWAEPQY+
Sbjct: 168 FVDEPLATASIAQVHRATLANGQDVVVKVQHDGIRAIILEDLKNAKSIVDWIAWAEPQYN 227
Query: 181 FNPIIDEWCKEAPKELDFNSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQSS 240
FNP+IDEWCKEAP+ELDFN EAENTR VS NLGCK +++ + A VDVLIP++IQSS
Sbjct: 228 FNPMIDEWCKEAPRELDFNIEAENTRTVSGNLGCKKTNDEV--RSANRVDVLIPDIIQSS 285
Query: 241 ETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAYAHQIYVDGFFNGDPHPGNFLVS 300
E+VLILE+MDG+RLND ESL+AFGV+KQK+VEEITRAYAHQI+VDGFFNGDPHPGNFLVS
Sbjct: 286 ESVLILEYMDGVRLNDVESLDAFGVDKQKIVEEITRAYAHQIFVDGFFNGDPHPGNFLVS 345
Query: 301 KDPPHRPILLDFGLTKKLSSSMKQALAKMFFAAAEGDHVALLSAFAEMGLRLRLDVPEQA 360
K+P HRPILLDFGL+KK+S S+KQALAKMF A+AEGD VALLSAFAEMGL+LRLD+P+QA
Sbjct: 346 KEPQHRPILLDFGLSKKISHSLKQALAKMFLASAEGDQVALLSAFAEMGLKLRLDMPDQA 405
Query: 361 MEVSTLFFRTSAPANEAFETVKNLSEQRAKNLKVIQEKMKLNQKEVKRFNPVDAFPGDIV 420
M V+ LFFR+S P++EA +T K L++QR +N+KVIQEKM+LNQKEVKRFNP+DAFPGDIV
Sbjct: 406 MSVAGLFFRSSTPSSEAMKTFKTLNDQRVQNMKVIQEKMQLNQKEVKRFNPIDAFPGDIV 465
Query: 421 IFSRVLNLLRGLSSTMNVRIVYLDIMRPFAEYVLQVGINKEPSVSAEWIYSKPIHSDVEA 480
IF+RV+NLLRGLSSTMNVRIVYLDIMRPFAE VL I++ P+V A WI+ PIHSDVE+
Sbjct: 466 IFARVINLLRGLSSTMNVRIVYLDIMRPFAESVLLGSISRGPTVDAHWIHDSPIHSDVES 525
Query: 481 KLRDFLVELGNDGKILGIQVCAYKDGEVIIDTSAGMLGRYDPRPVQPDSLFPVFSVTKGI 540
K+R L ELG+ KILGIQVCAYKDG+VIIDT+AG+LGRYDPRPVQPDSLFPVFSVTKG+
Sbjct: 526 KVRKLLAELGSIQKILGIQVCAYKDGKVIIDTAAGVLGRYDPRPVQPDSLFPVFSVTKGV 585
Query: 541 TAGMLHWLVDNGKLKLEENIANIWPEFKSNGKDLIKVHHVLNHTSGLHNVSVDLSSENPL 600
TAGM+HWLVD KL+L++ +AN+WP F SNGKD IKVHHVLNHTSG+ N S D ENPL
Sbjct: 586 TAGMIHWLVDKRKLQLDQTVANMWPGFGSNGKDTIKVHHVLNHTSGMQN-SFDPVGENPL 644
Query: 601 LICDWDECLNRIALSAPETEPGQEQLYHYLSFGWLCGGIIERASGKKFQEILEEGIIQPL 660
LICDWDECL RIA S+PETEPG +Q YHYL+FGWLCGGI+E ASGKK QEILEE I++PL
Sbjct: 645 LICDWDECLKRIANSSPETEPGSQQSYHYLTFGWLCGGILEYASGKKLQEILEESIVKPL 704
Query: 661 SIDGELYIGIPPGVESRLASLTIDTDDLNKVSGINNRPDLRLPSSFQPDKISQLAAITPA 720
+IDGELYIGIPPGVESRLA+LT DTD+++K+S I ++P+ LPS+FQPDKI Q+A P
Sbjct: 705 NIDGELYIGIPPGVESRLATLTFDTDEMSKLSSIASQPE--LPSTFQPDKIIQMATNLPV 762
Query: 721 VFNMLNIRRAIIPAANGHCSARALARYYAALADGGVVPPPHSRLSKPPLGSHPHIPKFPS 780
+FN LN+RRAIIPAANGHCSARALARYYA LADGG+VPPPHS LS+PPLGSH H+PKF S
Sbjct: 763 LFNTLNVRRAIIPAANGHCSARALARYYATLADGGLVPPPHSSLSQPPLGSHTHVPKFTS 822
Query: 781 HETSKKQKGTKKELLAALKNKTNNSEHGHKY-TKDLEGGSHIRTASGDTYARLINIETSS 839
+ + K+K KE+ A K K+ + + Y K S R ++ ++ ARL++ +S+
Sbjct: 823 LKDTTKKK-KGKEMAATEKGKSKDHQERKLYDEKQFMSASSSRESNTESLARLVDTNSSA 881
Query: 840 SNTSTTDSISNTDEPQSSNVRKIFNNPRIHDAFLGVGDYGDLALPNGRFGLGFKRYNTRD 899
T N+D+ Q ++ +F+NPRIHDAF+G GDY L +P+G+FGLGFKR ++D
Sbjct: 882 GKTEI-----NSDDHQ-HDIHNMFSNPRIHDAFMGAGDYSGLVVPDGKFGLGFKRAISQD 935
Query: 900 GSYIGFGHSGMGGSTGFCDVNNRFAIAVTLNKMSFGATTGRIIHFVCSELNLPVPEDYLR 959
GS +GFGHSG+GGSTGFCD+NNRF+IAVTLNKMS G T I+ VCSELN+P+P+D+
Sbjct: 936 GSLVGFGHSGLGGSTGFCDINNRFSIAVTLNKMSMGGVTANIVKLVCSELNIPLPKDFA- 994
Query: 960 FAEVEHDTPQDLGQPLIN 977
++ D+ +G PLIN
Sbjct: 995 -TDIGADS--QMGTPLIN 1009
|
Source: Arabidopsis thaliana Species: Arabidopsis thaliana Genus: Arabidopsis Family: Brassicaceae Order: Brassicales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|224115612|ref|XP_002332099.1| predicted protein [Populus trichocarpa] gi|222874919|gb|EEF12050.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 1420 bits (3675), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 703/994 (70%), Positives = 823/994 (82%), Gaps = 24/994 (2%)
Query: 1 MGWGNIYRRRMSVFSMAILIYLDYKAVQQREKWIKKSKISALWQRAHERNAKRVLNLIIK 60
MGWGNIYRRR VF++A++IY+DYKA+Q+REK++KK K ALW++AHERNAKRV NL+++
Sbjct: 1 MGWGNIYRRRAKVFTLAMIIYIDYKALQKREKFMKKPKSDALWKKAHERNAKRVFNLMVE 60
Query: 61 LEGLWVKLGQYLSTRADVLPEPYISLLKQLQDSLPPRPVQEVSQTIEREFGESMGGMFMD 120
LEGLWVKLGQY+S+RADVLP +IS LKQLQDSLPPRP +EV TIE+E G+S +F+D
Sbjct: 61 LEGLWVKLGQYMSSRADVLPSAFISNLKQLQDSLPPRPFEEVCHTIEKELGKSTKEIFLD 120
Query: 121 FVETPLATASIAQVHRATLVDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYD 180
F E PLATASIAQVHRATL+DG++VVVKVQH+ IK IILEDLK+AKSIVDWIAWAEPQY+
Sbjct: 121 FDENPLATASIAQVHRATLIDGQKVVVKVQHEDIKKIILEDLKDAKSIVDWIAWAEPQYN 180
Query: 181 FNPIIDEWCKEAPKELDFNSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQSS 240
F+P+IDEWCKEAP+ELDFN EAENTR VS NLGC +K+ DSNK P +VDVLIPEVIQS+
Sbjct: 181 FSPMIDEWCKEAPQELDFNHEAENTRTVSRNLGCTSKY-DSNK-PINQVDVLIPEVIQST 238
Query: 241 ETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAYAHQIYVDGFFNGDPHPGNFLVS 300
E VLILE+MDGIRLND ESLEA G N QK+VEEITRA+AHQIYVDGFFNGDPHPGNFLVS
Sbjct: 239 EKVLILEYMDGIRLNDFESLEACGANNQKIVEEITRAFAHQIYVDGFFNGDPHPGNFLVS 298
Query: 301 KDPPHRPILLDFGLTKKLSSSMKQALAKMFFAAAEGDHVALLSAFAEMGLRLRLDVPEQA 360
K+PPHRPILLDFGLTK++SSSMKQ+LAKMF A AEGDHVALLS+F+EMGL+LRLD PEQA
Sbjct: 299 KEPPHRPILLDFGLTKRISSSMKQSLAKMFLATAEGDHVALLSSFSEMGLKLRLDFPEQA 358
Query: 361 MEVSTLFFRTSAPANEAFETVKNLSEQRAKNLKVIQEKMKLNQKEVKRFNP--------- 411
M+ ++FFRTS A+EA E K+L EQRA+N+KV+QEKM L+QKEVKRFNP
Sbjct: 359 MDFISVFFRTSTSASEAAEYAKSLGEQRARNMKVLQEKMNLSQKEVKRFNPASPSITLFY 418
Query: 412 ----VDAFPGDIVIFSRVLNLLRGLSSTMNVRIVYLDIMRPFAEYVLQVGINKEPSVSAE 467
+DAFPGD+VIFSRV+ LLRGLS+T++ RIVY D+MRPFAE VLQ I K PS +A+
Sbjct: 419 FYQYIDAFPGDMVIFSRVIGLLRGLSTTLDARIVYHDVMRPFAESVLQDKIAKGPSDNAQ 478
Query: 468 WIYSKPIHSDVEAKLRDFLVELGNDGKILGIQVCAYKDGEVIIDTSAGMLGRYDPRPVQP 527
WI P+HSDVEAKLR LVELGND KILGIQVCAYKDGEVIIDT+AG+LGRYDPRPVQP
Sbjct: 479 WINDTPVHSDVEAKLRQILVELGNDDKILGIQVCAYKDGEVIIDTAAGVLGRYDPRPVQP 538
Query: 528 DSLFPVFSVTKGITAGMLHWLVDNGKLKLEENIANIWPEFKSNGKDLIKVHHVLNHTSGL 587
DSLFPVFSVTKGI AGMLHWLVDNGKL L ENIANIWPEF +NGK+LIKVHHVLNHTSGL
Sbjct: 539 DSLFPVFSVTKGIAAGMLHWLVDNGKLNLNENIANIWPEFGTNGKNLIKVHHVLNHTSGL 598
Query: 588 HNVSVDLSSENPLLICDWDECLNRIALSAPETEPGQEQLYHYLSFGWLCGGIIERASGKK 647
N +L ENPLL+ DWDECL RIA+SAPETEPGQEQLYHYLSFGWLCGGIIE ASGKK
Sbjct: 599 QNALANLREENPLLMADWDECLKRIAMSAPETEPGQEQLYHYLSFGWLCGGIIEHASGKK 658
Query: 648 FQEILEEGIIQPLSIDGELYIGIPPGVESRLASLTIDTDDLNKVSGINNRPDLRLPSSFQ 707
FQEILEE I++PL+I+GELY+GIPPGVESRLASLT+D DD +K+S I +RP+ PS+FQ
Sbjct: 659 FQEILEEAIVRPLNIEGELYVGIPPGVESRLASLTLDKDDFSKLSKIASRPE--FPSTFQ 716
Query: 708 PDKISQLAAITPAVFNMLNIRRAIIPAANGHCSARALARYYAALADGGVVPPPHSRLSKP 767
P+ ISQL PA+FNMLN+RRAIIP ANGHCSARALARYYAAL DGG+VPPPHS LS P
Sbjct: 717 PENISQLVTAVPALFNMLNVRRAIIPGANGHCSARALARYYAALVDGGLVPPPHSSLSMP 776
Query: 768 PLGSHPHIPKFPSHETSKKQKGTKKELL-AALKNKTNNSEHGHKYTKDLEGGSHIRTASG 826
PLG+HPHIPKFPS TSKKQKG K + +A K K N E ++ D + G ++
Sbjct: 777 PLGTHPHIPKFPSEITSKKQKGKKIKAAGSASKKKGNGYELKMNHSNDFKDGGE---SNS 833
Query: 827 DTYARLINIETSSSNTSTT---DSISNTDEPQSSNVRKIFNNPRIHDAFLGVGDYGDLAL 883
D Y RL N SS++S + ++ + +N KIFNNPRIHD F+GVG+Y +L L
Sbjct: 834 DGYTRLANDSAGSSSSSDASPPKGFAASENSRQNNANKIFNNPRIHDEFMGVGEYRNLVL 893
Query: 884 PNGRFGLGFKRYNTRDGSYIGFGHSGMGGSTGFCDVNNRFAIAVTLNKMSFGATTGRIIH 943
PNG+FGLGF+R+++ DGS+ GFGHSGMGGSTGFCD+ NRFAIAVTLNKMS G T RI+
Sbjct: 894 PNGKFGLGFRRFSSSDGSFYGFGHSGMGGSTGFCDIKNRFAIAVTLNKMSLGTATRRIVQ 953
Query: 944 FVCSELNLPVPEDYLRFAEVEHDTPQDLGQPLIN 977
FVCSELN+P+P+++ +E D + +PLIN
Sbjct: 954 FVCSELNVPLPDEFAVLSETAPDEELSIARPLIN 987
|
Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|334187920|ref|NP_001190388.1| ABC1 family protein [Arabidopsis thaliana] gi|332005982|gb|AED93365.1| ABC1 family protein [Arabidopsis thaliana] | Back alignment and taxonomy information |
|---|
Score = 1420 bits (3675), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 689/1009 (68%), Positives = 821/1009 (81%), Gaps = 48/1009 (4%)
Query: 1 MGWGNIYRRRMSVFSMAILIYLDYKAVQQREKWIKKSKISALWQRAHERNAKRVLNLIIK 60
MG GNIYRRRM VFS+AILIYLDYK VQQ+EKWIKKSK+ ALW +AH+RNAKRVLNLI++
Sbjct: 48 MGLGNIYRRRMKVFSIAILIYLDYKGVQQKEKWIKKSKVPALWDKAHDRNAKRVLNLIVE 107
Query: 61 LEGLWVKLGQYLSTRADVLPEPYISLLKQLQDSLPPRPVQEVSQ---------------- 104
LEGLWVKLGQYLSTRADVLP+ YISLL QLQDSLPPRP+QEV +
Sbjct: 108 LEGLWVKLGQYLSTRADVLPQAYISLLTQLQDSLPPRPLQEVCKIYLNVNIRGYTKKEKY 167
Query: 105 ---------------TIEREFGESMGGMFMDFVETPLATASIAQVHRATLVDGRQVVVKV 149
TIERE G SM +F DFV+ PLATASIAQVHRATL +G+ VVVKV
Sbjct: 168 FFDIMSMWYDFKVCRTIERELGNSMDVLFTDFVDEPLATASIAQVHRATLANGQDVVVKV 227
Query: 150 QHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEAENTRIVS 209
QH GI+ IILEDLKNAKSIVDWIAWAEPQY+FNP+IDEWCKEAP+ELDFN EAENTR VS
Sbjct: 228 QHDGIRAIILEDLKNAKSIVDWIAWAEPQYNFNPMIDEWCKEAPRELDFNIEAENTRTVS 287
Query: 210 ANLGCKNKHEDSNKKPAYEVDVLIPEVIQSSETVLILEFMDGIRLNDCESLEAFGVNKQK 269
NLGCK +++ + A VDVLIP++IQSSE+VLILE+MDG+RLND ESL+AFGV+KQK
Sbjct: 288 GNLGCKKTNDEV--RSANRVDVLIPDIIQSSESVLILEYMDGVRLNDVESLDAFGVDKQK 345
Query: 270 VVEEITRAYAHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSSSMKQALAKM 329
+VEEITRAYAHQI+VDGFFNGDPHPGNFLVSK+P HRPILLDFGL+KK+S S+KQALAKM
Sbjct: 346 IVEEITRAYAHQIFVDGFFNGDPHPGNFLVSKEPQHRPILLDFGLSKKISHSLKQALAKM 405
Query: 330 FFAAAEGDHVALLSAFAEMGLRLRLDVPEQAMEVSTLFFRTSAPANEAFETVKNLSEQRA 389
F A+AEGD VALLSAFAEMGL+LRLD+P+QAM V+ LFFR+S P++EA +T K L++QR
Sbjct: 406 FLASAEGDQVALLSAFAEMGLKLRLDMPDQAMSVAGLFFRSSTPSSEAMKTFKTLNDQRV 465
Query: 390 KNLKVIQEKMKLNQKEVKRFNPVDAFPGDIVIFSRVLNLLRGLSSTMNVRIVYLDIMRPF 449
+N+KVIQEKM+LNQKEVKRFNP+DAFPGDIVIF+RV+NLLRGLSSTMNVRIVYLDIMRPF
Sbjct: 466 QNMKVIQEKMQLNQKEVKRFNPIDAFPGDIVIFARVINLLRGLSSTMNVRIVYLDIMRPF 525
Query: 450 AEYVLQVGINKEPSVSAEWIYSKPIHSDVEAKLRDFLVELGNDGKILGIQVCAYKDGEVI 509
AE VL I++ P+V A WI+ PIHSDVE+K+R L ELG+ KILGIQVCAYKDG+VI
Sbjct: 526 AESVLLGSISRGPTVDAHWIHDSPIHSDVESKVRKLLAELGSIQKILGIQVCAYKDGKVI 585
Query: 510 IDTSAGMLGRYDPRPVQPDSLFPVFSVTKGITAGMLHWLVDNGKLKLEENIANIWPEFKS 569
IDT+AG+LGRYDPRPVQPDSLFPVFSVTKG+TAGM+HWLVD KL+L++ +AN+WP F S
Sbjct: 586 IDTAAGVLGRYDPRPVQPDSLFPVFSVTKGVTAGMIHWLVDKRKLQLDQTVANMWPGFGS 645
Query: 570 NGKDLIKVHHVLNHTSGLHNVSVDLSSENPLLICDWDECLNRIALSAPETEPGQEQLYHY 629
NGKD IKVHHVLNHTSG+ N S D ENPLLICDWDECL RIA S+PETEPG +Q YHY
Sbjct: 646 NGKDTIKVHHVLNHTSGMQN-SFDPVGENPLLICDWDECLKRIANSSPETEPGSQQSYHY 704
Query: 630 LSFGWLCGGIIERASGKKFQEILEEGIIQPLSIDGELYIGIPPGVESRLASLTIDTDDLN 689
L+FGWLCGGI+E ASGKK QEILEE I++PL+IDGELYIGIPPGVESRLA+LT DTD+++
Sbjct: 705 LTFGWLCGGILEYASGKKLQEILEESIVKPLNIDGELYIGIPPGVESRLATLTFDTDEMS 764
Query: 690 KVSGINNRPDLRLPSSFQPDKISQLAAITPAVFNMLNIRRAIIPAANGHCSARALARYYA 749
K+S I ++P+ LPS+FQPDKI Q+A P +FN LN+RRAIIPAANGHCSARALARYYA
Sbjct: 765 KLSSIASQPE--LPSTFQPDKIIQMATNLPVLFNTLNVRRAIIPAANGHCSARALARYYA 822
Query: 750 ALADGGVVPPPHSRLSKPPLGSHPHIPKFPSHETSKKQKGTKKELLAALKNKTNNSEHGH 809
LADGG+VPPPHS LS+PPLGSH H+PKF S + + K+K KE+ A K K+ + +
Sbjct: 823 TLADGGLVPPPHSSLSQPPLGSHTHVPKFTSLKDTTKKK-KGKEMAATEKGKSKDHQERK 881
Query: 810 KY-TKDLEGGSHIRTASGDTYARLINIETSSSNTSTTDSISNTDEPQSSNVRKIFNNPRI 868
Y K S R ++ ++ ARL++ +S+ T N+D+ Q ++ +F+NPRI
Sbjct: 882 LYDEKQFMSASSSRESNTESLARLVDTNSSAGKTEI-----NSDDHQ-HDIHNMFSNPRI 935
Query: 869 HDAFLGVGDYGDLALPNGRFGLGFKRYNTRDGSYIGFGHSGMGGSTGFCDVNNRFAIAVT 928
HDAF+G GDY L +P+G+FGLGFKR ++DGS +GFGHSG+GGSTGFCD+NNRF+IAVT
Sbjct: 936 HDAFMGAGDYSGLVVPDGKFGLGFKRAISQDGSLVGFGHSGLGGSTGFCDINNRFSIAVT 995
Query: 929 LNKMSFGATTGRIIHFVCSELNLPVPEDYLRFAEVEHDTPQDLGQPLIN 977
LNKMS G T I+ VCSELN+P+P+D+ ++ D+ +G PLIN
Sbjct: 996 LNKMSMGGVTANIVKLVCSELNIPLPKDFA--TDIGADS--QMGTPLIN 1040
|
Source: Arabidopsis thaliana Species: Arabidopsis thaliana Genus: Arabidopsis Family: Brassicaceae Order: Brassicales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356552616|ref|XP_003544660.1| PREDICTED: uncharacterized protein LOC100802638 [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 1403 bits (3632), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 694/983 (70%), Positives = 819/983 (83%), Gaps = 24/983 (2%)
Query: 1 MGWGNIYRRRMSVFSMAILIYLDYKAVQQREKWIKKSKISALWQRAHERNAKRVLNLIIK 60
MGWG+IY+RR+ VF+MA++IYLDYK+VQQREKW KS+ ++LW++AHERNAKRVLNLII+
Sbjct: 1 MGWGDIYKRRVRVFTMAVIIYLDYKSVQQREKWTSKSRQASLWEKAHERNAKRVLNLIIE 60
Query: 61 LEGLWVKLGQYLSTRADVLPEPYISLLKQLQDSLPPRPVQEVSQTIEREFGESMGGMFMD 120
+EGLWVKLGQY+STRADVLP YI LLKQLQDSLPPRP++EV TI++E G+SM +F D
Sbjct: 61 MEGLWVKLGQYMSTRADVLPAAYIRLLKQLQDSLPPRPLEEVYGTIQKELGKSMDELFAD 120
Query: 121 FVETPLATASIAQVHRATLVDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYD 180
FV PLATASIAQVHRATL++G +VVVKVQH GIKTIILEDLKNAKSIVDWIAWAEPQY+
Sbjct: 121 FVNKPLATASIAQVHRATLLNGHEVVVKVQHDGIKTIILEDLKNAKSIVDWIAWAEPQYN 180
Query: 181 FNPIIDEWCKEAPKELDFNSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQSS 240
FNP+IDEWCKEAPKELDFN EAENTR V+ NLGC+N++ D N + A VDVLIP+VIQS+
Sbjct: 181 FNPMIDEWCKEAPKELDFNHEAENTRTVAKNLGCRNQY-DGNMR-ANRVDVLIPDVIQST 238
Query: 241 ETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAYAHQIYVDGFFNGDPHPGNFLVS 300
E VL+LE+MDGIRLND ESLEA+GV+KQK+VEEITRAYAHQIY+DGFFNGDPHPGNFLVS
Sbjct: 239 EKVLVLEYMDGIRLNDLESLEAYGVDKQKLVEEITRAYAHQIYIDGFFNGDPHPGNFLVS 298
Query: 301 KDPPHRPILLDFGLTKKLSSSMKQALAKMFFAAAEGDHVALLSAFAEMGLRLRLDVPEQA 360
K+ PHRPILLDFGLTKKLSS++KQALAKMF A+AEGDHVALLSAFAEMGL+LRLD+PEQA
Sbjct: 299 KESPHRPILLDFGLTKKLSSTIKQALAKMFLASAEGDHVALLSAFAEMGLKLRLDIPEQA 358
Query: 361 MEVSTLFFRTSAPANEAFETVKNLSEQRAKNLKVIQEKMKLNQKEVKRFNPVDAFPGDIV 420
MEV+ +FFR + PANE +T+K+L++QR +N+KVIQEKM L++KE+KRFNPVDAFPGDIV
Sbjct: 359 MEVTAVFFRATTPANEYHKTMKSLADQRDRNMKVIQEKMNLDKKEMKRFNPVDAFPGDIV 418
Query: 421 IFSRVLNLLRGLSSTMNVRIVYLDIMRPFAEYVLQVGINKEPSVSAEWIYSKPIHSDVEA 480
IF RVLNLLRGLSSTMNV+IVY+DIMRPFAE VL+ I+K PSV+ WI+ P+HSDVE+
Sbjct: 419 IFGRVLNLLRGLSSTMNVQIVYMDIMRPFAESVLRGYISKGPSVNDRWIFDSPVHSDVES 478
Query: 481 KLRDFLVELGNDGKILGIQVCAYKDGEVIIDTSAGMLGRYDPRPVQPDSLFPVFSVTKGI 540
LR L+E+GN+ KILGIQVCAYKDGEVIIDT+AG+LG+YDPRPV+PDSLFPVFSVTKGI
Sbjct: 479 MLRQLLIEMGNNDKILGIQVCAYKDGEVIIDTAAGVLGKYDPRPVKPDSLFPVFSVTKGI 538
Query: 541 TAGMLHWLVDNGKLKLEENIANIWPEFKSNGKDLIKVHHVLNHTSGLHNVSVDLSSENPL 600
TAGM+HWLVDNG+L LEEN+ANIWP F SNGKD+IKVHHVLNHTSGLHN ++ E+PL
Sbjct: 539 TAGMIHWLVDNGQLNLEENVANIWPAFGSNGKDVIKVHHVLNHTSGLHNAMGSIAQEDPL 598
Query: 601 LICDWDECLNRIALSAPETEPGQEQLYHYLSFGWLCGGIIERASGKKFQEILEEGIIQPL 660
L+ DWD CLNRI S PETEPG+EQ YHYLSFGWLCGGIIE ASGKKFQEILEE I++PL
Sbjct: 599 LMFDWDGCLNRICQSVPETEPGKEQFYHYLSFGWLCGGIIEHASGKKFQEILEEAIVRPL 658
Query: 661 SIDGELYIGIPPGVESRLASLTIDTDDLNKVSGINNRPDLRLPSSFQPDKISQLAAITPA 720
I+GELY+GIPPGVESRLA+LT+DT DL+KVS + NRPD LPS+FQP +I+QLA P
Sbjct: 659 HIEGELYVGIPPGVESRLAALTVDTADLSKVSALANRPD--LPSTFQPQQIAQLATSLPV 716
Query: 721 VFNMLNIRRAIIPAANGHCSARALARYYAALADGGVVPPPHSRLSKPPLGSHPHIPKF-- 778
FN LN+RRAIIPAANGH SARALARYYAALADGG +PPPHS SKP LGSHPHIPK
Sbjct: 717 AFNTLNVRRAIIPAANGHVSARALARYYAALADGGKIPPPHSSASKPVLGSHPHIPKLSS 776
Query: 779 -PSHETSKKQKGTKKELLAALKNKTNNSEHGHKYTKDLEGGSHIRTASGDTYARLINIET 837
P ++K G +K+ + + TN+ E Y S R N E+
Sbjct: 777 SPKPPKTRKCIGRRKQATSTSVSTTNSYEKVSSYDD-----------SEANKGRNTNSES 825
Query: 838 SSSNTSTTDSISNTDEPQSSNVRKIFNNPRIHDAFLGVGDYGDLALPNGRFGLGFKRYNT 897
SS + +++ ISN +S K++ NPRI D FLG G+Y +LALP FGLGFKR+ +
Sbjct: 826 SSGDDASSSRISNN--LRSHVAGKVYKNPRIIDEFLGTGEYTNLALPGEGFGLGFKRFTS 883
Query: 898 RDGSYIGFGHSGMGGSTGFCDVNNRFAIAVTLNKMSFGATTGRIIHFVCSELNLPVPEDY 957
+DGS I FGHSGMGGSTGFCDV N F+IAVTLNKMSFG TG+I+ VCSELN+PVP+D+
Sbjct: 884 KDGSSIAFGHSGMGGSTGFCDVTNNFSIAVTLNKMSFGGVTGKIVQLVCSELNIPVPDDF 943
Query: 958 LRFAEVEHDTPQD---LGQPLIN 977
LRFA VE P + +G+P+IN
Sbjct: 944 LRFA-VEQSGPDEQLSMGRPIIN 965
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356563711|ref|XP_003550103.1| PREDICTED: uncharacterized protein LOC100775929 isoform 1 [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 1402 bits (3628), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 688/984 (69%), Positives = 817/984 (83%), Gaps = 25/984 (2%)
Query: 1 MGWGNIYRRRMSVFSMAILIYLDYKAVQQREKWIKKSKISALWQRAHERNAKRVLNLIIK 60
MGWG+IY+RR+ VF+MA+++YLDYK VQQREKW KS+ +ALW++AHERNAKRVLNLII+
Sbjct: 1 MGWGDIYKRRVRVFTMALIVYLDYKGVQQREKWTSKSRQAALWEKAHERNAKRVLNLIIE 60
Query: 61 LEGLWVKLGQYLSTRADVLPEPYISLLKQLQDSLPPRPVQEVSQTIEREFGESMGGMFMD 120
+EGLWVKLGQY+STRADVLP YI LLKQLQDSLPPRP++EV TI++E G+SM +F D
Sbjct: 61 MEGLWVKLGQYMSTRADVLPAAYIRLLKQLQDSLPPRPLEEVYGTIQKELGKSMDELFAD 120
Query: 121 FVETPLATASIAQVHRATLVDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYD 180
FV PLATASIAQVHRATL++G +VVVKVQH GIKTIILEDLKNAKSIVDWIAWAEPQY+
Sbjct: 121 FVNEPLATASIAQVHRATLLNGLEVVVKVQHDGIKTIILEDLKNAKSIVDWIAWAEPQYN 180
Query: 181 FNPIIDEWCKEAPKELDFNSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQSS 240
FNP+IDEWCKEAPKELDFN EAENTR V+ NLGC+N++ D N A VDVLIP+VIQS+
Sbjct: 181 FNPMIDEWCKEAPKELDFNHEAENTRTVAKNLGCRNQY-DGNMS-ANRVDVLIPDVIQST 238
Query: 241 ETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAYAHQIYVDGFFNGDPHPGNFLVS 300
E VL+LE+MDGIRLND ESL+A+GV+KQK+VEEITRAYAHQIYVDGFFNGDPHPGNFLVS
Sbjct: 239 EKVLVLEYMDGIRLNDLESLDAYGVDKQKLVEEITRAYAHQIYVDGFFNGDPHPGNFLVS 298
Query: 301 KDPPHRPILLDFGLTKKLSSSMKQALAKMFFAAAEGDHVALLSAFAEMGLRLRLDVPEQA 360
K+ PHRPILLDFGLTKKLSS++KQALAKMF A+AEGDHVALLSAFAEMGL+LRLD+PEQA
Sbjct: 299 KESPHRPILLDFGLTKKLSSTIKQALAKMFLASAEGDHVALLSAFAEMGLKLRLDIPEQA 358
Query: 361 MEVSTLFFRTSAPANEAFETVKNLSEQRAKNLKVIQEKMKLNQKEVKRFNPVDAFPGDIV 420
MEV+T+FFR + PANE +T+K+L++QR +N+KVIQEKM L++KE+KRFNPVDAFPGDIV
Sbjct: 359 MEVTTVFFRATTPANEYHKTMKSLADQRDRNMKVIQEKMNLDKKEMKRFNPVDAFPGDIV 418
Query: 421 IFSRVLNLLRGLSSTMNVRIVYLDIMRPFAEYVLQVGINKEPSVSAEWIYSKPIHSDVEA 480
IF RVLNLLRGLSSTMNVRIVY+DIMRPFAE VL I+K PS++ WI+ P+HSDVE+
Sbjct: 419 IFGRVLNLLRGLSSTMNVRIVYMDIMRPFAESVLSGYISKGPSLNDRWIFDSPVHSDVES 478
Query: 481 KLRDFLVELGNDGKILGIQVCAYKDGEVIIDTSAGMLGRYDPRPVQPDSLFPVFSVTKGI 540
KLR L+E+GN+ KILGIQVCAYKDGE IIDT+AG+LG+YDPRPVQPDSLFPVFSVTKGI
Sbjct: 479 KLRQLLIEMGNNDKILGIQVCAYKDGEAIIDTAAGVLGKYDPRPVQPDSLFPVFSVTKGI 538
Query: 541 TAGMLHWLVDNGKLKLEENIANIWPEFKSNGKDLIKVHHVLNHTSGLHNVSVDLSSENPL 600
TAGM+HWLVDNG+L LEEN+A IWP F+SNGKD+IKVHHVLNHTSGLHN ++ E+PL
Sbjct: 539 TAGMIHWLVDNGQLNLEENVATIWPAFRSNGKDVIKVHHVLNHTSGLHNAMGGIAQEDPL 598
Query: 601 LICDWDECLNRIALSAPETEPGQEQLYHYLSFGWLCGGIIERASGKKFQEILEEGIIQPL 660
L+ DWD CLNRI S PETEPG+EQ YHYLSFGWLCGGIIE ASGKKFQEILEE I++PL
Sbjct: 599 LMLDWDGCLNRICQSIPETEPGKEQFYHYLSFGWLCGGIIEHASGKKFQEILEEAIVRPL 658
Query: 661 SIDGELYIGIPPGVESRLASLTIDTDDLNKVSGINNRPDLRLPSSFQPDKISQLAAITPA 720
I+GELY+GIPPGVESRLA+LT+DT +L+K+S + NR D LPS+FQP +I+QLA P
Sbjct: 659 HIEGELYVGIPPGVESRLAALTVDTAELSKISALANRAD--LPSTFQPQQIAQLATTLPV 716
Query: 721 VFNMLNIRRAIIPAANGHCSARALARYYAALADGGVVPPPHSRLSKPPLGSHPHIPKFPS 780
FN LN+RRAIIPAANGH SARALARYYAALADGG +PPPHS SKP LGSHPHIPK S
Sbjct: 717 AFNTLNVRRAIIPAANGHVSARALARYYAALADGGKIPPPHSSASKPVLGSHPHIPKLSS 776
Query: 781 HE----TSKKQKGTKKELLAALKNKTNNSEHGHKYTKDLEGGSHIRTASGDTYARLINIE 836
+ ++K G + + + + TN+ E + +D + R N E
Sbjct: 777 SQKPPIKNRKCIGRRTQATSPSVSTTNSYEKVSSH-EDFDANE----------GRNTNSE 825
Query: 837 TSSSNTSTTDSISNTDEPQSSNVRKIFNNPRIHDAFLGVGDYGDLALPNGRFGLGFKRYN 896
+SS ++ I N ++ RK++ NPRI D FLG G+Y +LALP FGLGFKR++
Sbjct: 826 SSSGGDDSSSRIGNN--LRTHVARKVYKNPRIIDEFLGTGEYENLALPGESFGLGFKRFS 883
Query: 897 TRDGSYIGFGHSGMGGSTGFCDVNNRFAIAVTLNKMSFGATTGRIIHFVCSELNLPVPED 956
++DGS I FGHSGMGGSTGFCDV N F++AVTLNKMSFG TG+I+ VCSELN+PVP+D
Sbjct: 884 SKDGSSIAFGHSGMGGSTGFCDVTNNFSVAVTLNKMSFGGVTGKIVQLVCSELNIPVPDD 943
Query: 957 YLRFAEVEHDTPQD---LGQPLIN 977
+LRFA VE P + +G+P+IN
Sbjct: 944 FLRFA-VEQSGPDEQLSMGRPIIN 966
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|224121392|ref|XP_002330816.1| predicted protein [Populus trichocarpa] gi|222872618|gb|EEF09749.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 1388 bits (3593), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 693/959 (72%), Positives = 807/959 (84%), Gaps = 9/959 (0%)
Query: 1 MGWGNIYRRRMSVFSMAILIYLDYKAVQQREKWIKKS-KISALWQRAHERNAKRVLNLII 59
MGWGNIYRRR+ VFS+A+LIYLDYK +RE+++K + K LW+RAHERNAKRV N++I
Sbjct: 1 MGWGNIYRRRVKVFSLAVLIYLDYK---KREEFMKNNEKSEELWKRAHERNAKRVRNMMI 57
Query: 60 KLEGLWVKLGQYLSTRADVLPEPYISLLKQLQDSLPPRPVQEVSQTIEREFGESMGGMFM 119
+L GLWVKLGQYLSTRADVLP YISLLKQLQDSLPPRP+QEV +TIERE G+SM +F+
Sbjct: 58 QLGGLWVKLGQYLSTRADVLPSAYISLLKQLQDSLPPRPLQEVCRTIERELGKSMKEIFL 117
Query: 120 DFVETPLATASIAQVHRATLVDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQY 179
DF E LATASIAQVHRATL+DGR+VVVKVQH+ IK IILEDLK+AKSIVDWIAWAEPQY
Sbjct: 118 DFDENSLATASIAQVHRATLIDGREVVVKVQHEDIKAIILEDLKDAKSIVDWIAWAEPQY 177
Query: 180 DFNPIIDEWCKEAPKELDFNSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQS 239
+FNP+IDEWCKE PKELDFN EAENTR VS NLGC NK++ + K +VDVLIPEVIQS
Sbjct: 178 NFNPMIDEWCKETPKELDFNHEAENTRTVSKNLGCTNKYD--SDKSINQVDVLIPEVIQS 235
Query: 240 SETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAYAHQIYVDGFFNGDPHPGNFLV 299
+E VLILE+MDGIRLND ESLEA G NKQK+VEEITRAYAHQIYVDGFFNGDPH GNFLV
Sbjct: 236 TEKVLILEYMDGIRLNDLESLEACGANKQKIVEEITRAYAHQIYVDGFFNGDPHTGNFLV 295
Query: 300 SKDPPHRPILLDFGLTKKLSSSMKQALAKMFFAAAEGDHVALLSAFAEMGLRLRLDVPEQ 359
SK+PPHRPILLDFG TKK+SSSMKQ+LAKMF A AEGDHVALLS+FAEMGL+LRLD+PEQ
Sbjct: 296 SKEPPHRPILLDFGFTKKISSSMKQSLAKMFLATAEGDHVALLSSFAEMGLKLRLDLPEQ 355
Query: 360 AMEVSTLFFRTSAPANEAFETVKNLSEQRAKNLKVIQEKMKLNQKEVKRFNPVDAFPGDI 419
AM+V+++FFR S PANEA E K L+EQR +N+KV+QEKM L+QKEVKRFNP+DAFPGD+
Sbjct: 356 AMDVTSIFFRASTPANEAAEYAKTLNEQRTRNMKVLQEKMNLSQKEVKRFNPIDAFPGDM 415
Query: 420 VIFSRVLNLLRGLSSTMNVRIVYLDIMRPFAEYVLQVGINKEPSVSAEWIYSKPIHSDVE 479
VIFSRV+NLLRGLSST+N RIVY DIMRPFAE VLQ I K PS +A+WIY P+HS+VE
Sbjct: 416 VIFSRVVNLLRGLSSTLNARIVYQDIMRPFAESVLQEKIAKGPSANAQWIYDTPVHSEVE 475
Query: 480 AKLRDFLVELGNDGKILGIQVCAYKDGEVIIDTSAGMLGRYDPRPVQPDSLFPVFSVTKG 539
AKLR LVELGN+ KILGIQVCAYKDG+VIIDT+AG+LGRYDPRPVQPDSLF VFSVTKG
Sbjct: 476 AKLRQILVELGNEDKILGIQVCAYKDGKVIIDTAAGVLGRYDPRPVQPDSLFSVFSVTKG 535
Query: 540 ITAGMLHWLVDNGKLKLEENIANIWPEFKSNGKDLIKVHHVLNHTSGLHNVSVDLSSENP 599
ITAGMLHWLVDNGKL L+E+IANIWPEF +NGK+LIKVHHVLNHT+GL N +L ENP
Sbjct: 536 ITAGMLHWLVDNGKLNLDESIANIWPEFGTNGKNLIKVHHVLNHTAGLQNALDNLRKENP 595
Query: 600 LLICDWDECLNRIALSAPETEPGQEQLYHYLSFGWLCGGIIERASGKKFQEILEEGIIQP 659
LL+ DWDECL +IA+S PETEPGQ QLYH+LSFGWLCGGIIE ASGKKFQEILEE ++P
Sbjct: 596 LLLTDWDECLKQIAMSEPETEPGQVQLYHFLSFGWLCGGIIEHASGKKFQEILEEAFVRP 655
Query: 660 LSIDGELYIGIPPGVESRLASLTIDTDDLNKVSGINNRPDLRLPSSFQPDKISQLAAITP 719
L+I+GELY+GIPPGVESRLASLTID DD +K+S I + LPS+FQP+ ISQL
Sbjct: 656 LNIEGELYVGIPPGVESRLASLTIDKDDFSKLSKIGSLS--ALPSTFQPENISQLVTTLL 713
Query: 720 AVFNMLNIRRAIIPAANGHCSARALARYYAALADGGVVPPPHSRLSKPPLGSHPHIPKFP 779
A+ NMLNIRRAIIPAANGHCSARALARYYAAL D G+VPPPHS LS PPLGSHPHIPKF
Sbjct: 714 ALSNMLNIRRAIIPAANGHCSARALARYYAALVDRGLVPPPHSSLSTPPLGSHPHIPKFS 773
Query: 780 SHETSKKQKGTK-KELLAALKNKTNNSEHGHKYTKDLEGGSHIRTASGDTYARLINIETS 838
S TSK Q G K K + +A K K N E K +KD + R ++ D Y ++
Sbjct: 774 SEITSKMQNGKKSKAVGSASKKKENGYEQKTKQSKDSKDNGSGRESNSDGYTSTSGSSSA 833
Query: 839 SSNTSTTDSISNTDEPQSSNVRKIFNNPRIHDAFLGVGDYGDLALPNGRFGLGFKRYNTR 898
+ +S +S +++++ + +NV IFN+PRIHD F+G G+Y DL LPNG+FGLGFKR+++
Sbjct: 834 RNTSSPDNSSASSNDSRKNNVIWIFNDPRIHDQFMGTGEYSDLVLPNGKFGLGFKRFSSS 893
Query: 899 DGSYIGFGHSGMGGSTGFCDVNNRFAIAVTLNKMSFGATTGRIIHFVCSELNLPVPEDY 957
DGS+ GFGHSG+GGSTGFCD+ NRFAIAVTLNK+SFG T +II FVCSELN+P+P+++
Sbjct: 894 DGSFSGFGHSGLGGSTGFCDIENRFAIAVTLNKISFGTATRKIIQFVCSELNVPLPDEF 952
|
Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356563713|ref|XP_003550104.1| PREDICTED: uncharacterized protein LOC100775929 isoform 2 [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 1386 bits (3588), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 688/1012 (67%), Positives = 817/1012 (80%), Gaps = 53/1012 (5%)
Query: 1 MGWGNIYRRRMSVFSMAILIYLDYKAVQQREKWIKKSKISALWQRAHERNAKRVLNLIIK 60
MGWG+IY+RR+ VF+MA+++YLDYK VQQREKW KS+ +ALW++AHERNAKRVLNLII+
Sbjct: 1 MGWGDIYKRRVRVFTMALIVYLDYKGVQQREKWTSKSRQAALWEKAHERNAKRVLNLIIE 60
Query: 61 LEGLWVKLGQYLSTRADVLPEPYISLLKQLQDSLPPRPVQEV------------------ 102
+EGLWVKLGQY+STRADVLP YI LLKQLQDSLPPRP++EV
Sbjct: 61 MEGLWVKLGQYMSTRADVLPAAYIRLLKQLQDSLPPRPLEEVFLQICYRRTAFRKQFCII 120
Query: 103 ----------SQTIEREFGESMGGMFMDFVETPLATASIAQVHRATLVDGRQVVVKVQHQ 152
TI++E G+SM +F DFV PLATASIAQVHRATL++G +VVVKVQH
Sbjct: 121 LLNLVYICKVYGTIQKELGKSMDELFADFVNEPLATASIAQVHRATLLNGLEVVVKVQHD 180
Query: 153 GIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEAENTRIVSANL 212
GIKTIILEDLKNAKSIVDWIAWAEPQY+FNP+IDEWCKEAPKELDFN EAENTR V+ NL
Sbjct: 181 GIKTIILEDLKNAKSIVDWIAWAEPQYNFNPMIDEWCKEAPKELDFNHEAENTRTVAKNL 240
Query: 213 GCKNKHEDSNKKPAYEVDVLIPEVIQSSETVLILEFMDGIRLNDCESLEAFGVNKQKVVE 272
GC+N++ D N A VDVLIP+VIQS+E VL+LE+MDGIRLND ESL+A+GV+KQK+VE
Sbjct: 241 GCRNQY-DGNMS-ANRVDVLIPDVIQSTEKVLVLEYMDGIRLNDLESLDAYGVDKQKLVE 298
Query: 273 EITRAYAHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSSSMKQALAKMFFA 332
EITRAYAHQIYVDGFFNGDPHPGNFLVSK+ PHRPILLDFGLTKKLSS++KQALAKMF A
Sbjct: 299 EITRAYAHQIYVDGFFNGDPHPGNFLVSKESPHRPILLDFGLTKKLSSTIKQALAKMFLA 358
Query: 333 AAEGDHVALLSAFAEMGLRLRLDVPEQAMEVSTLFFRTSAPANEAFETVKNLSEQRAKNL 392
+AEGDHVALLSAFAEMGL+LRLD+PEQAMEV+T+FFR + PANE +T+K+L++QR +N+
Sbjct: 359 SAEGDHVALLSAFAEMGLKLRLDIPEQAMEVTTVFFRATTPANEYHKTMKSLADQRDRNM 418
Query: 393 KVIQEKMKLNQKEVKRFNPVDAFPGDIVIFSRVLNLLRGLSSTMNVRIVYLDIMRPFAEY 452
KVIQEKM L++KE+KRFNPVDAFPGDIVIF RVLNLLRGLSSTMNVRIVY+DIMRPFAE
Sbjct: 419 KVIQEKMNLDKKEMKRFNPVDAFPGDIVIFGRVLNLLRGLSSTMNVRIVYMDIMRPFAES 478
Query: 453 VLQVGINKEPSVSAEWIYSKPIHSDVEAKLRDFLVELGNDGKILGIQVCAYKDGEVIIDT 512
VL I+K PS++ WI+ P+HSDVE+KLR L+E+GN+ KILGIQVCAYKDGE IIDT
Sbjct: 479 VLSGYISKGPSLNDRWIFDSPVHSDVESKLRQLLIEMGNNDKILGIQVCAYKDGEAIIDT 538
Query: 513 SAGMLGRYDPRPVQPDSLFPVFSVTKGITAGMLHWLVDNGKLKLEENIANIWPEFKSNGK 572
+AG+LG+YDPRPVQPDSLFPVFSVTKGITAGM+HWLVDNG+L LEEN+A IWP F+SNGK
Sbjct: 539 AAGVLGKYDPRPVQPDSLFPVFSVTKGITAGMIHWLVDNGQLNLEENVATIWPAFRSNGK 598
Query: 573 DLIKVHHVLNHTSGLHNVSVDLSSENPLLICDWDECLNRIALSAPETEPGQEQLYHYLSF 632
D+IKVHHVLNHTSGLHN ++ E+PLL+ DWD CLNRI S PETEPG+EQ YHYLSF
Sbjct: 599 DVIKVHHVLNHTSGLHNAMGGIAQEDPLLMLDWDGCLNRICQSIPETEPGKEQFYHYLSF 658
Query: 633 GWLCGGIIERASGKKFQEILEEGIIQPLSIDGELYIGIPPGVESRLASLTIDTDDLNKVS 692
GWLCGGIIE ASGKKFQEILEE I++PL I+GELY+GIPPGVESRLA+LT+DT +L+K+S
Sbjct: 659 GWLCGGIIEHASGKKFQEILEEAIVRPLHIEGELYVGIPPGVESRLAALTVDTAELSKIS 718
Query: 693 GINNRPDLRLPSSFQPDKISQLAAITPAVFNMLNIRRAIIPAANGHCSARALARYYAALA 752
+ NR D LPS+FQP +I+QLA P FN LN+RRAIIPAANGH SARALARYYAALA
Sbjct: 719 ALANRAD--LPSTFQPQQIAQLATTLPVAFNTLNVRRAIIPAANGHVSARALARYYAALA 776
Query: 753 DGGVVPPPHSRLSKPPLGSHPHIPKFPSHE----TSKKQKGTKKELLAALKNKTNNSEHG 808
DGG +PPPHS SKP LGSHPHIPK S + ++K G + + + + TN+ E
Sbjct: 777 DGGKIPPPHSSASKPVLGSHPHIPKLSSSQKPPIKNRKCIGRRTQATSPSVSTTNSYEKV 836
Query: 809 HKYTKDLEGGSHIRTASGDTYARLINIETSSSNTSTTDSISNTDEPQSSNVRKIFNNPRI 868
+ +D + R N E+SS ++ I N ++ RK++ NPRI
Sbjct: 837 SSH-EDFDANE----------GRNTNSESSSGGDDSSSRIGNN--LRTHVARKVYKNPRI 883
Query: 869 HDAFLGVGDYGDLALPNGRFGLGFKRYNTRDGSYIGFGHSGMGGSTGFCDVNNRFAIAVT 928
D FLG G+Y +LALP FGLGFKR++++DGS I FGHSGMGGSTGFCDV N F++AVT
Sbjct: 884 IDEFLGTGEYENLALPGESFGLGFKRFSSKDGSSIAFGHSGMGGSTGFCDVTNNFSVAVT 943
Query: 929 LNKMSFGATTGRIIHFVCSELNLPVPEDYLRFAEVEHDTPQD---LGQPLIN 977
LNKMSFG TG+I+ VCSELN+PVP+D+LRFA VE P + +G+P+IN
Sbjct: 944 LNKMSFGGVTGKIVQLVCSELNIPVPDDFLRFA-VEQSGPDEQLSMGRPIIN 994
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST 
Original result of BLAST against Gene Ontology (AMIGO)
ID ![]() |
Alignment graph ![]() |
Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 977 | ||||||
| TAIR|locus:2177487 | 479 | AT5G50330 [Arabidopsis thalian | 0.427 | 0.872 | 0.304 | 2.9e-44 | |
| TAIR|locus:2126793 | 481 | AT4G24810 [Arabidopsis thalian | 0.428 | 0.871 | 0.292 | 8.8e-42 | |
| UNIPROTKB|Q86TW2 | 530 | ADCK1 "Uncharacterized aarF do | 0.307 | 0.566 | 0.345 | 6.4e-41 | |
| TAIR|locus:2009764 | 551 | AT1G65950 [Arabidopsis thalian | 0.318 | 0.564 | 0.323 | 9.9e-40 | |
| TAIR|locus:2177719 | 761 | ATH13 "AT5G64940" [Arabidopsis | 0.400 | 0.513 | 0.296 | 1.7e-39 | |
| ZFIN|ZDB-GENE-080401-5 | 521 | adck1 "aarF domain containing | 0.321 | 0.602 | 0.315 | 4.4e-39 | |
| UNIPROTKB|E2RSN4 | 513 | ADCK1 "Uncharacterized protein | 0.306 | 0.582 | 0.336 | 5.6e-39 | |
| UNIPROTKB|F1SE04 | 455 | ADCK1 "Uncharacterized protein | 0.274 | 0.589 | 0.351 | 1.9e-38 | |
| UNIPROTKB|F1MYG8 | 523 | ADCK1 "Uncharacterized protein | 0.306 | 0.571 | 0.333 | 4.1e-38 | |
| UNIPROTKB|Q5ZMT7 | 519 | ADCK1 "Uncharacterized aarF do | 0.326 | 0.614 | 0.313 | 1.1e-37 |
| TAIR|locus:2177487 AT5G50330 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 475 (172.3 bits), Expect = 2.9e-44, P = 2.9e-44
Identities = 141/463 (30%), Positives = 228/463 (49%)
Query: 7 YRRRMSVFSMAILIYLDYKAVQQREKWIKKSKISA-LWQRAHERNAKRVLNLIIKLEGLW 65
++R + A IY YK Q R +K +K +W+R HE+ A ++ + L G +
Sbjct: 20 WQRSFQFWVRATNIYTGYKVFQLRVSLVKDAKKQEEMWERQHEQAADKIYFMCSDLGGFF 79
Query: 66 VKLGQYLSTRADVLPEPYISLLKQLQDSLPPRPVQEVSQTIEREFGESMGGMFMDFVETP 125
+K+ Q L+ + D+ P ++ L L D P P + +E+E G+S+G +F F E P
Sbjct: 80 LKIAQLLA-KPDMAPAAWVKKLVTLCDQAPATPFDAIQLVLEKELGKSIGEIFETFDEKP 138
Query: 126 LATASIAQVHRATLVDGRQ--VVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNP 183
L +ASIAQVHRA +V G + VVVKVQH GI+ +++ D++N + ++ + ++D +
Sbjct: 139 LGSASIAQVHRA-IVKGNKMNVVVKVQHPGIERLMMTDIRNLQLFALYMQRTDIKFDLHS 197
Query: 184 IIDEWCKEAPKELDFNSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQSSET- 242
I E K+ E DF EA + L +E++ K P VL+P V++ T
Sbjct: 198 ITKEMEKQIGYEFDFKREANAMERIRCFL-----YENNKKSP-----VLVPRVLRDMVTK 247
Query: 243 -VLILEFMDGIR-LNDCESLEAFGVN---------KQKVVEEITRAYAHQIYVDGFFNGD 291
VL++E+++GI L+ + + G+N K ++ ++RAY I GFF+ D
Sbjct: 248 RVLVMEYINGIPILSIGDEMAKRGINPHGKIAEAAKHNILNSLSRAYGQMILKSGFFHAD 307
Query: 292 PHPGNFLVSKDPPHRPILLDFGLTKKLSSSMKQALAKMFFAAAEGDHVALLSAFAEMGLR 351
PHPGN L+ K LLD+G K+L + ++ A + A A+ + + +F EMGL
Sbjct: 308 PHPGNILICKG--QEVALLDYGQVKELPNKLRLGYANLVIAMADNNASRVSQSFWEMGLH 365
Query: 352 LRLDVPEQAMEVSTLFFRTSAPANEAFETVKNLSEQRAKNLKVIQEKMKLNQKEVKRFNP 411
+ E+ L A F+T K + Q V+Q + +K+
Sbjct: 366 TVAKCENEQQELLRL-------AQTLFDT-KMPTGQT-----VLQPFS--DDSSIKKI-A 409
Query: 412 VDAFPGDIVIFSRVLNLLRGLSSTMNVRIVYLDIMRPFAEYVL 454
V+ FP ++ R + LLRGLS M V + R AE L
Sbjct: 410 VETFPEELFSVLRTVVLLRGLSVGMGVNYSCAEQWRAMAEEAL 452
|
|
| TAIR|locus:2126793 AT4G24810 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 452 (164.2 bits), Expect = 8.8e-42, P = 8.8e-42
Identities = 135/462 (29%), Positives = 220/462 (47%)
Query: 7 YRRRMSVFSMAILIYLDYKAVQQREKWIKK-SKISALWQRAHERNAKRVLNLIIKLEGLW 65
++R ++ A IY YK Q R ++K +K +W+R HE A +V ++ L G +
Sbjct: 20 WQRSFQFWARATDIYTGYKVFQLRMNFVKDVNKHEEMWERQHELAAHKVYSMCSDLGGFF 79
Query: 66 VKLGQYLSTRADVLPEPYISLLKQLQDSLPPRPVQEVSQTIEREFGESMGGMFMDFVETP 125
+K+ Q L + D+ P ++ L L D P P V +E+E G+S+ +F F E P
Sbjct: 80 LKIAQILG-KPDLAPAAWVRKLVTLCDQAPATPFDAVRVVLEKELGKSIEQVFETFDEKP 138
Query: 126 LATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPI 184
L +ASIAQVHRA + D R VVVKVQH G++ +++ D++N + ++ + ++D +
Sbjct: 139 LGSASIAQVHRARVKGDKRDVVVKVQHPGVEKLMMVDIRNLQIFALYMQKTDIKFDLFSM 198
Query: 185 IDEWCKEAPKELDFNSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQSSET-- 242
E K+ E DF EA + L ++++ K P VL+P V + T
Sbjct: 199 TKEIEKQIGYEFDFKREANAMEKIRRFL-----YDNNRKSP-----VLVPRVFPNLVTRK 248
Query: 243 VLILEFMDGIRLNDC-ESLEAFGVN---------KQKVVEEITRAYAHQIYVDGFFNGDP 292
VL++EFM+GI + + + G+N K ++ +++AY I GFF+ DP
Sbjct: 249 VLVMEFMNGIPILSLGDEMAKRGINPHGKMAEAAKFNILHSLSQAYGQMILKSGFFHADP 308
Query: 293 HPGNFLVSKDPPHRPILLDFGLTKKLSSSMKQALAKMFFAAAEGDHVALLSAFAEMGLRL 352
HPGN L+ K LLD+G K+L ++ A + A A+ + L +F E+G+
Sbjct: 309 HPGNILIGKGS--EVALLDYGQVKELPDHLRLGYANLVIAIADNNASLALQSFRELGIAT 366
Query: 353 RLDVPEQAMEVSTLFFRTSAPANEAFETVKNLSEQRAKNLKVIQEKMKLNQKEVKRFNPV 412
+ E+ L A F+T L+ E +K+ + V
Sbjct: 367 VAKCKNEQQELLQL-------AKTMFDTEM---PPGTTTLQPFSE-----DSSIKKIS-V 410
Query: 413 DAFPGDIVIFSRVLNLLRGLSSTMNVRIVYLDIMRPFAEYVL 454
+AFP ++ R + LLRGLS + + R AE L
Sbjct: 411 EAFPEELFSVLRTVVLLRGLSVGIGINYSCAQHWRAMAEEAL 452
|
|
| UNIPROTKB|Q86TW2 ADCK1 "Uncharacterized aarF domain-containing protein kinase 1" [Homo sapiens (taxid:9606)] | Back alignment and assigned GO terms |
|---|
Score = 444 (161.4 bits), Expect = 6.4e-41, P = 6.4e-41
Identities = 111/321 (34%), Positives = 178/321 (55%)
Query: 12 SVFSMAILIYLDY----KAVQQ-REKWIK-KSKISALWQRAHERNAKRVLNLIIKLEGLW 65
+V + A++ Y DY K+V E++++ +SK ++ + H R+A+R+ L G +
Sbjct: 42 AVATTAVISY-DYLTSLKSVPYGSEEYLQLRSKSWPVFLQVHLRSARRLCELCCANRGTF 100
Query: 66 VKLGQYLSTRADVLPEPYISLLKQLQDSLPPRPVQEVSQTIEREFGESMGGMFMDFVETP 125
+K+GQ+L +LPE Y S LK L P +QE+ Q I + G+ + +F F +TP
Sbjct: 101 IKVGQHLGALDYLLPEEYTSTLKVLHSQAPQSSMQEIRQVIREDLGKEIHDLFQSFDDTP 160
Query: 126 LATASIAQVHRATLVDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPII 185
L TAS+AQVH+A L DGR V VKVQH ++ +D+ + +V + P+++F ++
Sbjct: 161 LGTASLAQVHKAVLHDGRTVAVKVQHPKVRAQSSKDILLMEVLVLAVKQLFPEFEFMWLV 220
Query: 186 DEWCKEAPKELDFNSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQSSETVLI 245
DE K P ELDF +E N VS L +H D K P D+ S+E VL+
Sbjct: 221 DEAKKNLPLELDFLNEGRNAEKVSQML----RHFDFLKVPRIHWDL-------STERVLL 269
Query: 246 LEFMDGIRLNDCESLEAFGVNKQKVVEEITRAYAHQIYVDGFFNGDPHPGNFLVSKDP-- 303
+EF+DG ++ND + +E ++ ++ + + Y+ I+V+GF + DPHPGN LV K P
Sbjct: 270 MEFVDGGQVNDRDYMERNKIDVNEISRHLGKMYSEMIFVNGFVHCDPHPGNVLVRKHPGT 329
Query: 304 -PHRPILLDFGLTKKLSSSMK 323
+LLD GL + L+ +
Sbjct: 330 GKAEIVLLDHGLYQMLTEEFR 350
|
|
| TAIR|locus:2009764 AT1G65950 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 433 (157.5 bits), Expect = 9.9e-40, P = 9.9e-40
Identities = 107/331 (32%), Positives = 178/331 (53%)
Query: 6 IYRRRMSVFSMAILIYLDYKAVQQREKWIKKSKISALWQRAHERNAKRVLNLIIKLEGLW 65
+ R +++S+ + + DYK +R + L + H R+AKR+L L +G +
Sbjct: 56 VVRSSRAIYSITLTV-ADYKYTLRRLPADSDEYLQRLTE-VHSRSAKRILKLCESNKGFY 113
Query: 66 VKLGQYLSTRADVLPEPYISLLKQLQDSLPPRPVQEVSQTIEREFGESMGGMFMDFVETP 125
VK GQ+++T ++P+ Y L LQD P QE+ Q + G+++ +++ F E P
Sbjct: 114 VKAGQFVAT-LKLVPKEYSLALSSLQDKAVPCNFQEIKQVLTSNLGQNLTEIYLSFDEEP 172
Query: 126 LATASIAQVHRATLVDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPII 185
+A ASIAQVH A L + ++V VKVQ+ G+K ++ D + +A P+Y F+ ++
Sbjct: 173 IAAASIAQVHHAVLKNHQEVAVKVQYPGLKQNMMLDTMIMSFLSKSVAKIFPEYRFDWLV 232
Query: 186 DEWCKEAPKELDFNSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQSSET--V 243
E+ K +ELDF EA+N+ ++ N KH NK + IP V T V
Sbjct: 233 YEFVKSISQELDFLQEAKNSERIAKNF----KH---NKM------ITIPTVFSEFTTTQV 279
Query: 244 LILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAYAHQIYVDGFFNGDPHPGNFLVSKDP 303
L ++F G +++D ESL+ V+ +KV + + +A I+V GF +GDPHPGN LVS +
Sbjct: 280 LTMQFCKGFKVDDVESLKRTNVSPEKVAKVLVEVFAEMIFVHGFIHGDPHPGNILVSPEG 339
Query: 304 PH--RPILLDFGLTKKLSSSMKQALAKMFFA 332
+ +LLD G K L + ++ +++ A
Sbjct: 340 QNGFSLVLLDHGNCKTLDEAFRRDFCRLWEA 370
|
|
| TAIR|locus:2177719 ATH13 "AT5G64940" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 451 (163.8 bits), Expect = 1.7e-39, P = 1.7e-39
Identities = 126/425 (29%), Positives = 213/425 (50%)
Query: 51 AKRVLNLIIKLEGLWVKLGQYLSTRADVLPEPYISLLKQLQDSLPPRPVQEVSQTIEREF 110
AK + I++L ++K+GQ STR D+LP+ Y+ L +LQD +PP P +E E
Sbjct: 219 AKWLKENILRLGPTFIKIGQQFSTRVDILPQEYVDQLSELQDQVPPFPSATALSIVEEEL 278
Query: 111 GESMGGMFMDFVETPLATASIAQVHRATLVDGRQVVVKVQHQGIKTIILEDLKNAKSIVD 170
G S+ +F F P+A AS+ QVHRA L G++VV+KVQ G+K + DLKN + I +
Sbjct: 279 GGSVEDIFDRFDYEPIAAASLGQVHRARL-KGQEVVLKVQRPGLKDLFDIDLKNLRVIAE 337
Query: 171 WIAWAEPQYD-----FNPIIDEWCKEAPKELDFNSEAENTRIVSANLGCKNKHEDSNKKP 225
++ +P+ D + I DE +E+D+ EA N+ + + N K + K P
Sbjct: 338 YLQKVDPKSDGAKRDWVAIYDECASVLYQEIDYTKEAANSELFANNF----KDLEYVKVP 393
Query: 226 AYEVDVLIPEVIQSSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAYAHQIYVD 285
+ + P+V L +E++ GI++N ++L+ GV+++++ +Y QI
Sbjct: 394 SIYWEYTTPQV-------LTMEYVPGIKINKIQALDQLGVDRKRLGRYAVESYLEQILSH 446
Query: 286 GFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSSSMKQALAKMFFAAAEGDHVALLSAF 345
GFF+ DPHPGN V R I DFG+ +S ++++ L + F+ E D +L A
Sbjct: 447 GFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGVYEKDPDKVLQAM 506
Query: 346 AEMGLRLRL-DVPEQAMEVSTLFF------RTSAPANEAFE--TVKNLSEQRAKNLKVIQ 396
+MG+ + D+ A+ + LFF R +A E E + L ++ + + Q
Sbjct: 507 VQMGVLVPTGDLT--AVRRTALFFLNSFEERLAAQRKEKEEIAAAEELGFKKPLSKEEKQ 564
Query: 397 EKMKLNQKEV-KRFNPVDA-----FPGDIVIFSRVLNLLRGLSSTMNVRIVYLDIMRPFA 450
EK K + + + A FP R ++L G+ ++ R +I +P+A
Sbjct: 565 EKKKQRLAAIGEDLLAIAADQPFRFPATFTFVVRAFSVLDGIGKGLDPRFDITEIAKPYA 624
Query: 451 EYVLQ 455
+L+
Sbjct: 625 LELLR 629
|
|
| ZFIN|ZDB-GENE-080401-5 adck1 "aarF domain containing kinase 1" [Danio rerio (taxid:7955)] | Back alignment and assigned GO terms |
|---|
Score = 427 (155.4 bits), Expect = 4.4e-39, P = 4.4e-39
Identities = 108/342 (31%), Positives = 177/342 (51%)
Query: 5 NIYRRRMSVFSMAILIYLDY----KAVQQ--REKWIKKSKISALWQRAHERNAKRVLNLI 58
+I R + + A++ Y DY + VQ E W KSK+ H R+A+R+L+L
Sbjct: 34 SIVRFGRAAATTAVISY-DYLTTLRDVQYGTEEYWAVKSKV-------HRRSAERLLDLC 85
Query: 59 IKLEGLWVKLGQYLSTRADVLPEPYISLLKQLQDSLPPRPVQEVSQTIEREFGESMGGMF 118
G ++K+GQ+L +LPE Y S LK L P ++ + Q I + G+ + +F
Sbjct: 86 CANRGTFIKVGQHLGALEYLLPEEYTSTLKILHSRAPHSSMEHIRQVIREDLGKELSDLF 145
Query: 119 MDFVETPLATASIAQVHRATLVDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQ 178
+ F ETP AS+AQVH+A L DGR V VKVQH ++ +D+ + ++ + W P
Sbjct: 146 IQFDETPHGAASLAQVHKAVLPDGRTVAVKVQHPKVQRQSSKDIVVMEFLLQVVHWLFPD 205
Query: 179 YDFNPIIDEWCKEAPKELDFNSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ 238
+ F +++E K P ELDF +E N ++ L K K P D+
Sbjct: 206 FAFMWLVEEAKKNMPLELDFLNEGRNAEKIADML----KQFSFLKIPKIHWDL------- 254
Query: 239 SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAYAHQIYVDGFFNGDPHPGNFL 298
S++ +L ++F +G ++ND E + G+N ++ + + Y+ I+V+GF + DPHPGN L
Sbjct: 255 STKRILTMDFAEGGQVNDREYMRRHGINVNEISRNLGKIYSEMIFVNGFVHCDPHPGNVL 314
Query: 299 VSKDPPHRP---ILLDFGLTKKLSSSMKQALAKMFFAAAEGD 337
V K P +LLD GL + L+ + +++ + +GD
Sbjct: 315 VRKSPESNKTEIVLLDHGLYQVLNQDFRLDYCRLWQSLIKGD 356
|
|
| UNIPROTKB|E2RSN4 ADCK1 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] | Back alignment and assigned GO terms |
|---|
Score = 426 (155.0 bits), Expect = 5.6e-39, P = 5.6e-39
Identities = 106/315 (33%), Positives = 171/315 (54%)
Query: 12 SVFSMAILIYLDYKAVQQREKWIKKSKISALWQRAHERNAKRVLNLIIKLEGLWVKLGQY 71
+V + A++ Y DY + + + + L + H R+A+R+ L G ++K+GQ+
Sbjct: 42 AVATTAVISY-DYLTSLRSVPYGSEEYLQ-LRSKVHLRSARRLCELCCANRGTFIKVGQH 99
Query: 72 LSTRADVLPEPYISLLKQLQDSLPPRPVQEVSQTIEREFGESMGGMFMDFVETPLATASI 131
L +LPE Y S LK L P +QEV Q I + G+ + +F+ F +TPL AS+
Sbjct: 100 LGALDYLLPEEYTSTLKVLHSQAPQSSIQEVRQVIREDLGKEIHDLFVSFDDTPLGAASL 159
Query: 132 AQVHRATLVDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKE 191
AQVH+A L DGR V VKVQH ++ +D+ + +V + P+++F ++DE K
Sbjct: 160 AQVHKAVLHDGRTVAVKVQHPKVQAQSSKDILLMEVLVLAVKQLFPEFEFMWLVDEAKKN 219
Query: 192 APKELDFNSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQSSETVLILEFMDG 251
P ELDF +E N+ V+ L KH D K P D+ S++ VL++EF+DG
Sbjct: 220 LPLELDFLNEGRNSEKVAQML----KHFDFLKVPRIYWDL-------STKRVLLMEFVDG 268
Query: 252 IRLNDCESLEAFGVNKQKVVEEITRAYAHQIYVDGFFNGDPHPGNFLVSKDPPHRPI--- 308
++ND + +E ++ ++ + + Y+ I+V+GF + DPHPGN LV K P +
Sbjct: 269 GQVNDRDYMEKNKIDVNEISRHLGKMYSEMIFVNGFVHCDPHPGNVLVRKCPGTGKVEIV 328
Query: 309 LLDFGLTKKLSSSMK 323
LLD GL + L+ +
Sbjct: 329 LLDHGLYQVLTDEFR 343
|
|
| UNIPROTKB|F1SE04 ADCK1 "Uncharacterized protein" [Sus scrofa (taxid:9823)] | Back alignment and assigned GO terms |
|---|
Score = 421 (153.3 bits), Expect = 1.9e-38, P = 1.9e-38
Identities = 99/282 (35%), Positives = 156/282 (55%)
Query: 45 RAHERNAKRVLNLIIKLEGLWVKLGQYLSTRADVLPEPYISLLKQLQDSLPPRPVQEVSQ 104
+ H R+A+R+ L G ++K+GQ+L +LPE Y S LK L P +QEV Q
Sbjct: 5 QVHLRSARRLCELCCANRGTFIKVGQHLGALDYLLPEEYTSTLKVLHSQAPQSSMQEVRQ 64
Query: 105 TIEREFGESMGGMFMDFVETPLATASIAQVHRATLVDGRQVVVKVQHQGIKTIILEDLKN 164
I + G+ + +F+ F +TPL AS+AQVH+A L DGR V VKVQH ++ +D+
Sbjct: 65 VIREDLGKEIHDLFVSFDDTPLGAASLAQVHKAVLHDGRTVAVKVQHPKVQAQSSKDILL 124
Query: 165 AKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEAENTRIVSANLGCKNKHEDSNKK 224
+ +V + P+++F ++DE K P ELDF +E N V+ L KH D K
Sbjct: 125 MEVLVLAVKQLFPEFEFMWLVDEAKKNLPLELDFLNEGRNAEKVAQML----KHFDFLKV 180
Query: 225 PAYEVDVLIPEVIQSSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAYAHQIYV 284
P ++ S++ VL++EF+DG ++ND + +E ++ ++ + + Y+ I+V
Sbjct: 181 PRIHWEL-------STKRVLLMEFVDGGQVNDRDYMERNKIDVNEISRHLGKMYSEMIFV 233
Query: 285 DGFFNGDPHPGNFLVSKDPPHRP---ILLDFGLTKKLSSSMK 323
+GF + DPHPGN LV K P +LLD GL + L+ +
Sbjct: 234 NGFVHCDPHPGNVLVRKRPGSEKAEIVLLDHGLYQVLTEEFR 275
|
|
| UNIPROTKB|F1MYG8 ADCK1 "Uncharacterized protein" [Bos taurus (taxid:9913)] | Back alignment and assigned GO terms |
|---|
Score = 418 (152.2 bits), Expect = 4.1e-38, P = 4.1e-38
Identities = 105/315 (33%), Positives = 169/315 (53%)
Query: 12 SVFSMAILIYLDYKAVQQREKWIKKSKISALWQRAHERNAKRVLNLIIKLEGLWVKLGQY 71
+V + A++ Y DY + + + + L + H R+A+R+ L G ++K+GQ+
Sbjct: 42 AVATTAVISY-DYLTSLRSVPYGSEEYLQ-LRSKVHLRSARRLCELCCANRGTFIKVGQH 99
Query: 72 LSTRADVLPEPYISLLKQLQDSLPPRPVQEVSQTIEREFGESMGGMFMDFVETPLATASI 131
L +LPE Y S LK L P ++EV Q I + G+ + +F+ F +TPL AS+
Sbjct: 100 LGALDYLLPEEYTSTLKVLHSQAPQSSMKEVRQVIREDLGKEIHDLFLSFDDTPLGAASL 159
Query: 132 AQVHRATLVDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKE 191
AQVH+A L DGR V VKVQH ++ +D+ + +V + P+++F ++DE K
Sbjct: 160 AQVHKAVLRDGRTVAVKVQHPKVQAQSSKDILLMEVLVLAVKQLFPEFEFMWLVDEAKKN 219
Query: 192 APKELDFNSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQSSETVLILEFMDG 251
P ELDF +E N V+ L KH D K P ++ S++ VL++EF+DG
Sbjct: 220 LPLELDFLNEGRNAEKVAQML----KHFDFLKVPHIYWEL-------STKRVLLMEFVDG 268
Query: 252 IRLNDCESLEAFGVNKQKVVEEITRAYAHQIYVDGFFNGDPHPGNFLVSKDPPHRPI--- 308
++ND +E ++ ++ + R Y+ I+V+GF + DPHPGN LV K P +
Sbjct: 269 GQVNDRHYMERNKIDINEISRHLGRMYSEMIFVNGFVHCDPHPGNVLVRKRPDTGKVEIV 328
Query: 309 LLDFGLTKKLSSSMK 323
LLD GL + L+ +
Sbjct: 329 LLDHGLYQALTEEFR 343
|
|
| UNIPROTKB|Q5ZMT7 ADCK1 "Uncharacterized aarF domain-containing protein kinase 1" [Gallus gallus (taxid:9031)] | Back alignment and assigned GO terms |
|---|
Score = 414 (150.8 bits), Expect = 1.1e-37, P = 1.1e-37
Identities = 105/335 (31%), Positives = 173/335 (51%)
Query: 6 IYRRRMSVFSMAILIYLDYKAVQQREKWIKKSKISALWQRAHERNAKRVLNLIIKLEGLW 65
+ R ++ + A++ Y DY R + L + H R+A+R+ L G +
Sbjct: 33 VVRVGRAIATTAVITY-DY-LTSLRNVPYGSEEYDFLKSQVHLRSAERLRELCCANRGTF 90
Query: 66 VKLGQYLSTRADVLPEPYISLLKQLQDSLPPRPVQEVSQTIEREFGESMGGMFMDFVETP 125
+K+GQ+L +LPE Y LK L P QE+ Q I + G+ + +F+ F +TP
Sbjct: 91 IKVGQHLGALDYLLPEEYTRTLKVLHSQAPQSTRQEIEQVIREDLGKEIKELFVSFEDTP 150
Query: 126 LATASIAQVHRATLVDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPII 185
L AS+AQVH+A L DGR V VK+QH ++ +D+ + ++ + P ++F ++
Sbjct: 151 LGAASLAQVHKAVLQDGRTVAVKIQHPKVQAQSSKDIFLMEVLLLVVKQIFPDFEFMWLV 210
Query: 186 DEWCKEAPKELDFNSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQSSETVLI 245
+E K P ELDF +E N V+ L K+ + K P ++ S+ VL+
Sbjct: 211 EEAKKNLPLELDFLNEGRNAEKVAQML----KNFEFLKVPRIYWEL-------STRRVLL 259
Query: 246 LEFMDGIRLNDCESLEAFGVNKQKVVEEITRAYAHQIYVDGFFNGDPHPGNFLVSKDPPH 305
+EFM+G ++ND +E G++ ++ + + Y+ I+V+GF + DPHPGN LV K P
Sbjct: 260 MEFMEGGQVNDKAYMEKNGIDVNEISRNLGKLYSEMIFVNGFVHCDPHPGNVLVKKCPDS 319
Query: 306 RP---ILLDFGLTKKLSSSMKQALAKMFFAAAEGD 337
ILLD GL + LS S + +++ A + D
Sbjct: 320 GKAYIILLDHGLYQVLSESFRMDYCRLWLALIKAD 354
|
|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries 
Original result of BLAST against SWISS-PROT
No confident hit for EC number transfering in SWISSPROT detected by BLAST
EC Number Prediction by Ezypred Server 
Original result from Ezypred Server
Fail to connect to Ezypred Server
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING 
Original result from the STRING server
Fail to connect to STRING server
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against CDD database part I
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 977 | |||
| COG0661 | 517 | COG0661, AarF, Predicted unusual protein kinase [G | 6e-78 | |
| TIGR01982 | 437 | TIGR01982, UbiB, 2-polyprenylphenol 6-hydroxylase | 2e-63 | |
| PRK04750 | 537 | PRK04750, ubiB, putative ubiquinone biosynthesis p | 1e-50 | |
| pfam00144 | 326 | pfam00144, Beta-lactamase, Beta-lactamase | 1e-38 | |
| pfam03109 | 117 | pfam03109, ABC1, ABC1 family | 1e-26 | |
| COG1680 | 390 | COG1680, AmpC, Beta-lactamase class C and other pe | 4e-26 | |
| PRK03642 | 432 | PRK03642, PRK03642, putative periplasmic esterase; | 2e-08 | |
| PRK11289 | 384 | PRK11289, ampC, beta-lactamase/D-alanine carboxype | 1e-07 | |
| PRK10662 | 378 | PRK10662, PRK10662, beta-lactam binding protein Am | 2e-05 | |
| PRK13128 | 518 | PRK13128, PRK13128, D-aminopeptidase; Reviewed | 2e-04 | |
| PRK14879 | 211 | PRK14879, PRK14879, serine/threonine protein kinas | 7e-04 | |
| TIGR03724 | 199 | TIGR03724, arch_bud32, Kae1-associated kinase Bud3 | 8e-04 | |
| PRK10359 | 232 | PRK10359, PRK10359, lipopolysaccharide core biosyn | 8e-04 | |
| pfam06176 | 229 | pfam06176, WaaY, Lipopolysaccharide core biosynthe | 0.001 | |
| cd05120 | 155 | cd05120, APH_ChoK_like, Aminoglycoside 3'-phosphot | 0.004 |
| >gnl|CDD|223733 COG0661, AarF, Predicted unusual protein kinase [General function prediction only] | Back alignment and domain information |
|---|
Score = 263 bits (675), Expect = 6e-78
Identities = 130/427 (30%), Positives = 209/427 (48%), Gaps = 38/427 (8%)
Query: 32 KWIKKSKISALWQRAH--ERNAKRVLNLIIKLEGLWVKLGQYLSTRADVLPEPYISLLKQ 89
+ + S L E+ A+R+ + +L ++KLGQ LSTR D++P Y L +
Sbjct: 37 RLLSWLGKSKLASSEELREKRAERLRLALEELGPTFIKLGQILSTRPDLVPPEYAEELAK 96
Query: 90 LQDSLPPRPVQEVSQTIEREFGESMGGMFMDFVETPLATASIAQVHRATLVDGRQVVVKV 149
LQD +PP P +E + IE E G + +F +F P+A+ASIAQVHRA L G +V VKV
Sbjct: 97 LQDRVPPFPFEEAERIIEEELGRPIEELFSEFEPEPIASASIAQVHRAVLKSGEEVAVKV 156
Query: 150 QHQGIKTIILEDLKNAKSIVDWIAWAEPQ---YDFNPIIDEWCKEAPKELDFNSEAENTR 206
Q GI+ I DLK + + I P D ++DE+ K +ELD+ EA N
Sbjct: 157 QRPGIRERIEADLKLLRRLARLIKRLPPGGRRLDLVEVVDEFEKRLREELDYRREAANAE 216
Query: 207 IVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ--SSETVLILEFMDGIRLNDCESLEAFG 264
N +D DV +P+V ++ VL +E++DGI+++D +L++ G
Sbjct: 217 RFRENF------KDDP-------DVYVPKVYWEYTTRRVLTMEWIDGIKISDIAALKSAG 263
Query: 265 VNKQKVVEEITRAYAHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSSSMKQ 324
++++++ E + RA+ Q+ DGFF+ DPHPGN LV D R +LLDFG+ +L ++
Sbjct: 264 IDRKELAELLVRAFLRQLLRDGFFHADPHPGNILVRSDG--RIVLLDFGIVGRLDPKFRR 321
Query: 325 ALAKMFFAAAEGDHVALLSAFAEMGLRLRLDVPEQAMEVSTLFFRTSAPANEAFETVKNL 384
LA++ A D+ + E+G VP T +A E +
Sbjct: 322 YLAELLLAFLNRDYDRVAELHVELGY-----VPPD-----TDRDPLAAAIRAVLEPIYGK 371
Query: 385 SEQRAKNLKVIQEKMKLNQKEVKRFNPVDAFPGDIVIFSRVLNLLRGLSSTMNVRIVYLD 444
+ + + KL + V R P+ P ++V+ R L L+ G+ ++ R
Sbjct: 372 P---LEEISFGEILDKLFE--VARRFPMR-LPPELVLLQRTLLLVEGVGRQLDPRFNLWA 425
Query: 445 IMRPFAE 451
+ +P
Sbjct: 426 VAQPLLA 432
|
Length = 517 |
| >gnl|CDD|233667 TIGR01982, UbiB, 2-polyprenylphenol 6-hydroxylase | Back alignment and domain information |
|---|
Score = 221 bits (564), Expect = 2e-63
Identities = 110/313 (35%), Positives = 164/313 (52%), Gaps = 33/313 (10%)
Query: 42 LWQRAHERNAKRVLNLIIKLEGL---WVKLGQYLSTRADVLPEPYISLLKQLQDSLPPRP 98
+ R R L + LE L ++K GQ LSTRAD+LP L LQD +PP
Sbjct: 38 PFSNRENRLMSRGERLRLALEELGPTFIKFGQTLSTRADLLPADIAEELSLLQDRVPPFD 97
Query: 99 VQEVSQTIEREFGESMGGMFMDFVETPLATASIAQVHRATLVDGRQVVVKVQHQGIKTII 158
+ + IE G + +F +F E PLA ASIAQVHRA LVDG++V VKV GI+ I
Sbjct: 98 FKVARKVIEAALGGPLEELFAEFEEKPLAAASIAQVHRARLVDGKEVAVKVLRPGIEKTI 157
Query: 159 LEDLKNAKSIVDWIA-WAE------PQYDFNPIIDEWCKEAPKELDFNSEAENTRIVSAN 211
D+ ++ +A E + ++ E+ K +ELD EA N ++
Sbjct: 158 AADIA----LLYRLARIVERLSPDSRRLRPTEVVKEFEKTLRRELDLRREAAN----ASE 209
Query: 212 LGCKNKHEDSNKKPAYEVDVLIPEVI--QSSETVLILEFMDGIRLNDCESLEAFGVNKQK 269
LG +N D V +PEV ++SE VL +E++DGI L+D +L+ G++++
Sbjct: 210 LG-ENFKNDPG--------VYVPEVYWDRTSERVLTMEWIDGIPLSDIAALDEAGLDRKA 260
Query: 270 VVEEITRAYAHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSSSMKQALAKM 329
+ E + R++ +Q+ DGFF+ D HPGN V KD + I LDFG+ +LS ++ LA++
Sbjct: 261 LAENLARSFLNQVLRDGFFHADLHPGNIFVLKDG--KIIALDFGIVGRLSEEDRRYLAEI 318
Query: 330 FFAAAEGD--HVA 340
+ D VA
Sbjct: 319 LYGFLNRDYRRVA 331
|
This model represents the enzyme (UbiB) which catalyzes the first hydroxylation step in the ubiquinone biosynthetic pathway in bacteria. It is believed that the reaction is 2-polyprenylphenol -> 6-hydroxy-2-polyprenylphenol. This model finds hits primarily in the proteobacteria. The gene is also known as AarF in certain species [Biosynthesis of cofactors, prosthetic groups, and carriers, Menaquinone and ubiquinone]. Length = 437 |
| >gnl|CDD|235310 PRK04750, ubiB, putative ubiquinone biosynthesis protein UbiB; Reviewed | Back alignment and domain information |
|---|
Score = 187 bits (476), Expect = 1e-50
Identities = 110/318 (34%), Positives = 153/318 (48%), Gaps = 32/318 (10%)
Query: 30 REKWIKKSKISALWQRAHERNAKRVLNLIIKLEGL---WVKLGQYLSTRADVLPEPYISL 86
+ ++ + S W ++ R L + LE L +VK GQ LSTR D+ P
Sbjct: 28 LTRPLRLWRRSLFWMPNRHKDKPRGERLRLALEELGPIFVKFGQMLSTRRDLFPPDIADE 87
Query: 87 LKQLQDSLPPRPVQEVSQTIEREFGESMGGMFMDFVETPLATASIAQVHRATLVD-GRQV 145
L LQD +PP IE+ G + F DF PLA+ASIAQVH A L D GR+V
Sbjct: 88 LALLQDRVPPFDGALARAIIEKALGGPVEEWFDDFDIKPLASASIAQVHFARLKDNGREV 147
Query: 146 VVKVQHQGIKTIILEDLKNAKSIVDWIA--WAE-----PQYDFNPIIDEWCKEAPKELDF 198
VVKV I +I DL + W+ + P+ ++ E+ K ELD
Sbjct: 148 VVKVLRPDILPVIDADLALMYRLARWVERLLPDGRRLKPR----EVVAEFEKTLHDELDL 203
Query: 199 NSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVI--QSSETVLILEFMDGIRLND 256
EA N + N EDS+ + +PEV SETV+++E M GI ++D
Sbjct: 204 MREAANASQLRRNF------EDSD-------MLYVPEVYWDYCSETVMVMERMYGIPVSD 250
Query: 257 CESLEAFGVNKQKVVEEITRAYAHQIYVDGFFNGDPHPGNFLVSKDPPHRP--ILLDFGL 314
+L A G + + + E + Q++ DGFF+ D HPGN VS DPP P I LDFG+
Sbjct: 251 VAALRAAGTDMKLLAERGVEVFFTQVFRDGFFHADMHPGNIFVSYDPPENPRYIALDFGI 310
Query: 315 TKKLSSSMKQALAKMFFA 332
L+ K+ LA+ F A
Sbjct: 311 VGSLNKEDKRYLAENFLA 328
|
Length = 537 |
| >gnl|CDD|215746 pfam00144, Beta-lactamase, Beta-lactamase | Back alignment and domain information |
|---|
Score = 146 bits (370), Expect = 1e-38
Identities = 78/293 (26%), Positives = 120/293 (40%), Gaps = 40/293 (13%)
Query: 482 LRDFLVELGNDGKILGIQVCAYKDGEVIIDTSAGMLGRYDPRPVQPDSLFPVFSVTKGIT 541
L + EL G I G+ V +DG+V++D G+ RPV D+LF + SVTK T
Sbjct: 1 LDRLIRELMAQGGIPGVAVAVTRDGKVVVDR-GGVADLEGGRPVTADTLFRIASVTKTFT 59
Query: 542 AGMLHWLVDNGKLKLEENIANIWPEFKSNGKDLIKVHHVLNHTSGL-HNVSVDLSSENPL 600
A + LV+ GKL L++ ++ PEF GK I + +L HTSGL + D E
Sbjct: 60 AAAVLQLVERGKLDLDDPVSKYLPEFAGPGKGGITLRDLLTHTSGLPPLFAPDDLEEAA- 118
Query: 601 LICDWDECLNRIALSAPETEPGQEQLYHYLSFGWLCGGIIERASGKKFQEILEEGIIQPL 660
D E + +A P PG Y ++G L G ++ER +G+ ++E+L + I++PL
Sbjct: 119 --ADLAELVRALAALPPVWPPGTRWGYSNTAYGLL-GELLERVTGQSYEELLGDRILRPL 175
Query: 661 SIDGELYIGIPPGVESRLASLTIDTDDLNKVSGINNRPDLRLPSSFQPDKISQLAAITPA 720
+ E +G+P + R A+ +VS
Sbjct: 176 GMT-ETELGVPEPGDPRDAAGYTGEGPPVRVSPGPLPAG--------------------- 213
Query: 721 VFNMLNIRRAIIPAANGHCSARALARYYAALADGGVVPPPHSRLSKPPLGSHP 773
A +AR LAR+ L G ++ L
Sbjct: 214 ------------AYAGLKSTARDLARFLLLLLGGLLLSAATLAQLTDWLRGGT 254
|
This family appears to be distantly related to pfam00905 and PF00768 D-alanyl-D-alanine carboxypeptidase. Length = 326 |
| >gnl|CDD|111949 pfam03109, ABC1, ABC1 family | Back alignment and domain information |
|---|
Score = 104 bits (263), Expect = 1e-26
Identities = 44/97 (45%), Positives = 58/97 (59%)
Query: 109 EFGESMGGMFMDFVETPLATASIAQVHRATLVDGRQVVVKVQHQGIKTIILEDLKNAKSI 168
E G + +F +F E P+A ASIAQVHRA L DG +V VKVQ G+K I DLK K +
Sbjct: 2 ELGAPVEEVFAEFDEEPIAAASIAQVHRAVLKDGEEVAVKVQRPGVKKRIRSDLKLLKFL 61
Query: 169 VDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEAENT 205
+ P +D + ++DE+ K P+ELDF EA N
Sbjct: 62 AKILKKFFPGFDLDWLVDEFRKSLPQELDFLREAANA 98
|
This family includes ABC1 from yeast and AarF from E. coli. These proteins have a nuclear or mitochondrial subcellular location in eukaryotes. The exact molecular functions of these proteins is not clear, however yeast ABC1 suppresses a cytochrome b mRNA translation defect and is essential for the electron transfer in the bc 1 complex and E. coli AarF is required for ubiquinone production. It has been suggested that members of the ABC1 family are novel chaperonins. These proteins are unrelated to the ABC transporter proteins. Length = 117 |
| >gnl|CDD|224594 COG1680, AmpC, Beta-lactamase class C and other penicillin binding proteins [Defense mechanisms] | Back alignment and domain information |
|---|
Score = 111 bits (278), Expect = 4e-26
Identities = 57/194 (29%), Positives = 89/194 (45%), Gaps = 7/194 (3%)
Query: 473 PIHSDVEAKLRDFLVELGNDGKI--LGIQVCAYKDGEVIIDTSAGMLGRYDPRPVQPDSL 530
+ A+L + + G+ + DG+ ++ G+ PV P ++
Sbjct: 29 EVAGFDAARLDRLADAIMEEYGAPGPGLALAVVLDGKTVVAKGYGVADEGYGGPVTPPTV 88
Query: 531 FPVFSVTKGITAGMLHWLVDNGKLKLEENIANIWPEFKSN--GKDLIKVHHVLNHTSGLH 588
F + SVTK TA +L LV+ GKL L++ ++ PE K G I + +L HTSGL
Sbjct: 89 FRIASVTKSFTATLLGKLVEEGKLDLDDPVSKYLPEGKDPATGGAPITLRDLLTHTSGLP 148
Query: 589 NVSVDLSSENPLLICDWDECLNRIALSAPET--EPGQEQLYHYLSFGWLCGGIIERASGK 646
+ L+ D + L +A PE PG Y ++G L G I+ER +GK
Sbjct: 149 FPEDYAYAVPKRLVQDQEAALEYLASLPPELAPPPGTAFAYSNSNYGLL-GAILERVTGK 207
Query: 647 KFQEILEEGIIQPL 660
+E+L E I +PL
Sbjct: 208 PLEELLRERIFEPL 221
|
Length = 390 |
| >gnl|CDD|179620 PRK03642, PRK03642, putative periplasmic esterase; Provisional | Back alignment and domain information |
|---|
Score = 57.1 bits (138), Expect = 2e-08
Identities = 49/212 (23%), Positives = 89/212 (41%), Gaps = 31/212 (14%)
Query: 480 AKLR--DFLVELGNDGKILGIQVCAYKDGEVIIDTSAGMLGRYD-------PRPVQPDSL 530
KL D + D G+ + KD +++ + G +YD P +++
Sbjct: 38 EKLNQMDRWISQQIDAGYPGVNLLIIKDNQIVYRKAWGYAKKYDGSTLLAHPVKATTNTM 97
Query: 531 FPVFSVTKGITAGM-LHWLVDNGKLKLEENIANIWPEFKS------NGKDLIKVHHVLNH 583
+ + S TK L LV GKL + + I+ P FK GK+ +++ +L+H
Sbjct: 98 YDLASNTKMYATNFALQKLVSEGKLDVNDLISKYIPGFKDSPGDKIKGKNTLRIIDLLHH 157
Query: 584 TSGL--------HNVSVDLSSENPLLICDWDECLNRIALSAPETEPGQEQLYHYLSFGWL 635
++G V+ L S+ D L I + E +PG + +Y + + L
Sbjct: 158 SAGFPADPQYPNKAVAGALYSQ------DKSTTLEMIKKTPLEYQPGSKHIYSDVDY-ML 210
Query: 636 CGGIIERASGKKFQEILEEGIIQPLSIDGELY 667
G I+E +G+ +EE I +PL + ++
Sbjct: 211 LGFIVESITGQPLDRYVEESIYRPLGLTHTVF 242
|
Length = 432 |
| >gnl|CDD|236894 PRK11289, ampC, beta-lactamase/D-alanine carboxypeptidase; Provisional | Back alignment and domain information |
|---|
Score = 54.9 bits (133), Expect = 1e-07
Identities = 41/142 (28%), Positives = 68/142 (47%), Gaps = 15/142 (10%)
Query: 523 RPVQPDSLFPVFSVTKGITAGMLHWLVDNGKLKLEENIANIWPEFKSNGKDLIKVHHVLN 582
+PV D+LF + SV+K TA + + G+L L + + PE K + D I + H+
Sbjct: 75 QPVTQDTLFELGSVSKTFTATLAGYAQARGELSLSDPASKYLPELKGSPFDGITLLHLAT 134
Query: 583 HTSGLHNVSVDLSSENPLLICDW----DECLNRIALSAPETEPGQEQLYHYLSFGWLCGG 638
+T+G L PL + D + L P PG ++LY S G L G
Sbjct: 135 YTAG------GL----PLQVPDEVKDDAQLLRYFQAWQPAYAPGTQRLYSNPSIG-LFGY 183
Query: 639 IIERASGKKFQEILEEGIIQPL 660
+ +A G+ F++++E+ + PL
Sbjct: 184 LAAKAMGQPFEQLMEQRLFPPL 205
|
Length = 384 |
| >gnl|CDD|236732 PRK10662, PRK10662, beta-lactam binding protein AmpH; Provisional | Back alignment and domain information |
|---|
Score = 47.3 bits (113), Expect = 2e-05
Identities = 39/144 (27%), Positives = 70/144 (48%), Gaps = 10/144 (6%)
Query: 523 RPVQPDSLFPVFSVTKGITAGMLHWLVDNGKLKLEENIANIWP---EFKSNGKDLIKVHH 579
RP Q DSL + S+TK +T+ +L L D+G +KL + ++ P + I + +
Sbjct: 76 RP-QLDSLIRIASITKLMTSEVLVKLADDGTVKLTDPLSKYAPPGARVPTYNGQPITLLN 134
Query: 580 VLNHTSGLHNVSVDLSSENPLLICDWDECLNR---IALSAPETEPGQEQLYHYLSFGWLC 636
+ HTS L ++ P+ + W R ++ + + PG + Y L+F L
Sbjct: 135 LATHTSALPREQPGGAAHRPVFV--WPTREQRWKWLSTAKLKAAPGTQAAYSNLAFD-LL 191
Query: 637 GGIIERASGKKFQEILEEGIIQPL 660
+ +A+GK + ++L E I +PL
Sbjct: 192 ADALAKAAGKPYTQLLREKITRPL 215
|
Length = 378 |
| >gnl|CDD|171868 PRK13128, PRK13128, D-aminopeptidase; Reviewed | Back alignment and domain information |
|---|
Score = 44.5 bits (105), Expect = 2e-04
Identities = 49/218 (22%), Positives = 89/218 (40%), Gaps = 24/218 (11%)
Query: 480 AKLRDFLVELGNDGKILGIQVCAYKDGEVIIDTSAGMLGRYDPRPVQPDSLFPVFSVTKG 539
L F+ + + K G V KDGEV++ + G + + P++ P+ SV+K
Sbjct: 7 PTLEAFVHAIPQNYKGPGGAVAVVKDGEVVLRHAWGFADLARRKAMTPETRMPICSVSKQ 66
Query: 540 ITAGMLHWLVDNGKLKLEENIANIWPEFKSNGKDLIKVHHVLNHTSGLHN---VSVDLSS 596
T +L + ++ L+ +A +F+ V + N+ SGL + ++V L
Sbjct: 67 FTCAVLLDCIGEPEM-LDAALAAYLDQFE---DPRPAVRDLCNNQSGLRDYWALTV-LCG 121
Query: 597 ENPLLICDWDECLNRIA-LSAPETEPGQEQLYHYLSFGWLCGGIIERASGKKFQEILEEG 655
P I D+ N + L PG Y +F + +IE+ +G+ ++L E
Sbjct: 122 AAPEGIFLPDQAQNLLRRLKTTHFAPGTHYSYCNGNFR-ILADLIEQHTGRSLADLLAER 180
Query: 656 IIQPLSIDGELYIGIPPGVESRLASLTIDTDDLNKVSG 693
I P + + A L DT ++ +G
Sbjct: 181 IFAPAGM--------------KTAELIPDTALFDECTG 204
|
Length = 518 |
| >gnl|CDD|237847 PRK14879, PRK14879, serine/threonine protein kinase; Provisional | Back alignment and domain information |
|---|
Score = 41.8 bits (99), Expect = 7e-04
Identities = 24/93 (25%), Positives = 42/93 (45%), Gaps = 19/93 (20%)
Query: 225 PA-YEVDVLIPEVIQSSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAYA--HQ 281
PA Y VD ++++E+++G L D + + G+ + ++ EI R H
Sbjct: 64 PAVYFVDP--------ENFIIVMEYIEGEPLKD--LINSNGMEELELSREIGRLVGKLHS 113
Query: 282 IYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGL 314
G +GD N ++S + L+DFGL
Sbjct: 114 A---GIIHGDLTTSNMILSGG---KIYLIDFGL 140
|
Length = 211 |
| >gnl|CDD|234331 TIGR03724, arch_bud32, Kae1-associated kinase Bud32 | Back alignment and domain information |
|---|
Score = 41.4 bits (98), Expect = 8e-04
Identities = 23/93 (24%), Positives = 38/93 (40%), Gaps = 21/93 (22%)
Query: 227 YEVDVLIPEVIQSSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAYA--HQIYV 284
Y+VD +++E+++G L D +++ EI R H+
Sbjct: 65 YDVDP--------DNKTIVMEYIEGKPLKD-----VIEEGNDELLREIGRLVGKLHKA-- 109
Query: 285 DGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKK 317
G +GD N +V D + L+DFGL K
Sbjct: 110 -GIVHGDLTTSNIIVRDD---KLYLIDFGLGKY 138
|
Members of this protein family are the Bud32 protein associated with Kae1 (kinase-associated endopeptidase 1) in the Archaea. In many Archaeal genomes, Kae1 and Bud32 are fused. The complex is homologous to the Kae1 and Bud32 subunits of the eukaryotic KEOPS complex, an apparently ancient protein kinase-containing molecular machine [Unknown function, General]. Length = 199 |
| >gnl|CDD|182407 PRK10359, PRK10359, lipopolysaccharide core biosynthesis protein; Provisional | Back alignment and domain information |
|---|
Score = 41.7 bits (98), Expect = 8e-04
Identities = 20/65 (30%), Positives = 35/65 (53%), Gaps = 7/65 (10%)
Query: 238 QSSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAYAHQIYVDGFFNGDPHPGNF 297
+ ++++E+++G+ LND + K K+ I + H G +GDPH GNF
Sbjct: 114 YAHTYIMLIEYIEGVELNDMPEISE--DVKAKIKASIESLHQH-----GMVSGDPHKGNF 166
Query: 298 LVSKD 302
+VSK+
Sbjct: 167 IVSKN 171
|
Length = 232 |
| >gnl|CDD|114869 pfam06176, WaaY, Lipopolysaccharide core biosynthesis protein (WaaY) | Back alignment and domain information |
|---|
Score = 41.3 bits (97), Expect = 0.001
Identities = 22/60 (36%), Positives = 35/60 (58%), Gaps = 7/60 (11%)
Query: 243 VLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAYAHQIYVDGFFNGDPHPGNFLVSKD 302
++++E+++G+ LND E K K+ + I + H G +GDPH GNF+VSKD
Sbjct: 119 IMLIEYIEGVELNDM--PEISEDVKAKIKQSIESLHQH-----GMVSGDPHRGNFIVSKD 171
|
This family consists of several bacterial lipopolysaccharide core biosynthesis proteins (WaaY or RfaY). The waaY, waaQ, and waaP genes are located in the central operon of the waa (formerly rfa) locus on the chromosome of Escherichia coli. This locus contains genes whose products are involved in the assembly of the core region of the lipopolysaccharide molecule. WaaY is the enzyme that phosphorylates HepII in this system. Length = 229 |
| >gnl|CDD|240159 cd05120, APH_ChoK_like, Aminoglycoside 3'-phosphotransferase (APH) and Choline Kinase (ChoK) family | Back alignment and domain information |
|---|
Score = 38.9 bits (91), Expect = 0.004
Identities = 24/90 (26%), Positives = 46/90 (51%), Gaps = 13/90 (14%)
Query: 230 DVLIPEVIQSSE----TVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAYA--HQIY 283
+ +P+V+ S E + L++E+++G L++ E K+ + E++ A HQ+
Sbjct: 52 GLPVPKVLASGESDGWSYLLMEWIEGETLDEVSEEE-----KEDIAEQLAELLAKLHQLP 106
Query: 284 VDGFFNGDPHPGNFLVSKDPPHRPILLDFG 313
+ +GD HPGN LV D ++D+
Sbjct: 107 LLVLCHGDLHPGNILV--DDGKILGIIDWE 134
|
The APH/ChoK family is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). The family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides and macrolides, leads to their inactivation and to bacterial antibiotic resistance. Phosphorylation of choline, ethanolamine, and homoserine serves as precursors to the synthesis of important biological compounds, such as the major phospholipids, phosphatidylcholine and phosphatidylethanolamine and the amino acids, threonine, methionine, and isoleucine. Length = 155 |
Conserved Domains Detected by HHsearch 
Original result of HHsearch against CDD database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 977 | |||
| COG0661 | 517 | AarF Predicted unusual protein kinase [General fun | 100.0 | |
| PRK04750 | 537 | ubiB putative ubiquinone biosynthesis protein UbiB | 100.0 | |
| TIGR01982 | 437 | UbiB 2-polyprenylphenol 6-hydroxylase. This model | 100.0 | |
| KOG1235 | 538 | consensus Predicted unusual protein kinase [Genera | 100.0 | |
| PRK11289 | 384 | ampC beta-lactamase/D-alanine carboxypeptidase; Pr | 100.0 | |
| PRK10662 | 378 | beta-lactam binding protein AmpH; Provisional | 100.0 | |
| PRK03642 | 432 | putative periplasmic esterase; Provisional | 100.0 | |
| KOG1236 | 565 | consensus Predicted unusual protein kinase [Genera | 100.0 | |
| PRK13128 | 518 | D-aminopeptidase; Reviewed | 100.0 | |
| PF00144 | 329 | Beta-lactamase: Beta-lactamase; InterPro: IPR00146 | 100.0 | |
| COG1680 | 390 | AmpC Beta-lactamase class C and other penicillin b | 100.0 | |
| KOG1234 | 363 | consensus ABC (ATP binding cassette) 1 protein [Ge | 100.0 | |
| PF03109 | 119 | ABC1: ABC1 family; InterPro: IPR004147 This entry | 99.91 | |
| cd05145 | 190 | RIO1_like RIO kinase family; RIO1, RIO3 and simila | 99.8 | |
| cd05147 | 190 | RIO1_euk RIO kinase family; eukaryotic RIO1, catal | 99.78 | |
| smart00090 | 237 | RIO RIO-like kinase. | 99.69 | |
| KOG0595 | 429 | consensus Serine/threonine-protein kinase involved | 99.66 | |
| cd05144 | 198 | RIO2_C RIO kinase family; RIO2, C-terminal catalyt | 99.65 | |
| KOG0593 | 396 | consensus Predicted protein kinase KKIAMRE [Genera | 99.61 | |
| cd05119 | 187 | RIO RIO kinase family, catalytic domain. The RIO k | 99.61 | |
| KOG0605 | 550 | consensus NDR and related serine/threonine kinases | 99.61 | |
| PRK10359 | 232 | lipopolysaccharide core biosynthesis protein; Prov | 99.58 | |
| KOG0581 | 364 | consensus Mitogen-activated protein kinase kinase | 99.54 | |
| PF01163 | 188 | RIO1: RIO1 family; InterPro: IPR018934 Protein pho | 99.53 | |
| KOG4250 | 732 | consensus TANK binding protein kinase TBK1 [Signal | 99.52 | |
| KOG0600 | 560 | consensus Cdc2-related protein kinase [Cell cycle | 99.51 | |
| KOG1163 | 341 | consensus Casein kinase (serine/threonine/tyrosine | 99.51 | |
| KOG0615 | 475 | consensus Serine/threonine protein kinase Chk2 and | 99.5 | |
| PRK09188 | 365 | serine/threonine protein kinase; Provisional | 99.49 | |
| PRK14879 | 211 | serine/threonine protein kinase; Provisional | 99.47 | |
| KOG0661 | 538 | consensus MAPK related serine/threonine protein ki | 99.47 | |
| KOG0574 | 502 | consensus STE20-like serine/threonine kinase MST [ | 99.47 | |
| KOG4236 | 888 | consensus Serine/threonine protein kinase PKC mu/P | 99.45 | |
| KOG0667 | 586 | consensus Dual-specificity tyrosine-phosphorylatio | 99.45 | |
| KOG0659 | 318 | consensus Cdk activating kinase (CAK)/RNA polymera | 99.44 | |
| KOG0594 | 323 | consensus Protein kinase PCTAIRE and related kinas | 99.43 | |
| TIGR03724 | 199 | arch_bud32 Kae1-associated kinase Bud32. Members o | 99.43 | |
| KOG0575 | 592 | consensus Polo-like serine/threonine protein kinas | 99.43 | |
| KOG0192 | 362 | consensus Tyrosine kinase specific for activated ( | 99.42 | |
| cd05146 | 197 | RIO3_euk RIO kinase family; eukaryotic RIO3, catal | 99.4 | |
| KOG0598 | 357 | consensus Ribosomal protein S6 kinase and related | 99.4 | |
| PRK12274 | 218 | serine/threonine protein kinase; Provisional | 99.39 | |
| KOG0663 | 419 | consensus Protein kinase PITSLRE and related kinas | 99.39 | |
| KOG0592 | 604 | consensus 3-phosphoinositide-dependent protein kin | 99.39 | |
| KOG0616 | 355 | consensus cAMP-dependent protein kinase catalytic | 99.38 | |
| KOG0583 | 370 | consensus Serine/threonine protein kinase [Signal | 99.37 | |
| KOG0608 | 1034 | consensus Warts/lats-like serine threonine kinases | 99.36 | |
| KOG0578 | 550 | consensus p21-activated serine/threonine protein k | 99.36 | |
| KOG0577 | 948 | consensus Serine/threonine protein kinase [Signal | 99.36 | |
| cd05600 | 333 | STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p- | 99.35 | |
| cd05085 | 250 | PTKc_Fer Catalytic domain of the Protein Tyrosine | 99.35 | |
| cd05628 | 363 | STKc_NDR1 Catalytic domain of the Protein Serine/T | 99.34 | |
| cd05571 | 323 | STKc_PKB Catalytic domain of the Protein Serine/Th | 99.34 | |
| cd05626 | 381 | STKc_LATS2 Catalytic domain of the Protein Serine/ | 99.33 | |
| cd05627 | 360 | STKc_NDR2 Catalytic domain of the Protein Serine/T | 99.33 | |
| cd05593 | 328 | STKc_PKB_gamma Catalytic domain of the Protein Ser | 99.33 | |
| cd05614 | 332 | STKc_MSK2_N N-terminal catalytic domain of the Pro | 99.33 | |
| cd05631 | 285 | STKc_GRK4 Catalytic domain of the Protein Serine/T | 99.32 | |
| PLN00034 | 353 | mitogen-activated protein kinase kinase; Provision | 99.32 | |
| cd05084 | 252 | PTKc_Fes Catalytic domain of the Protein Tyrosine | 99.32 | |
| cd05587 | 324 | STKc_cPKC Catalytic domain of the Protein Serine/T | 99.32 | |
| KOG0193 | 678 | consensus Serine/threonine protein kinase RAF [Sig | 99.32 | |
| KOG0597 | 808 | consensus Serine-threonine protein kinase FUSED [G | 99.32 | |
| cd05096 | 304 | PTKc_DDR1 Catalytic domain of the Protein Tyrosine | 99.32 | |
| cd05598 | 376 | STKc_LATS Catalytic domain of the Protein Serine/T | 99.31 | |
| cd05151 | 170 | ChoK Choline Kinase (ChoK). The ChoK subfamily is | 99.31 | |
| KOG0658 | 364 | consensus Glycogen synthase kinase-3 [Carbohydrate | 99.31 | |
| cd05595 | 323 | STKc_PKB_beta Catalytic domain of the Protein Seri | 99.31 | |
| PTZ00263 | 329 | protein kinase A catalytic subunit; Provisional | 99.31 | |
| cd05594 | 325 | STKc_PKB_alpha Catalytic domain of the Protein Ser | 99.31 | |
| cd05584 | 323 | STKc_p70S6K Catalytic domain of the Protein Serine | 99.31 | |
| cd05621 | 370 | STKc_ROCK2 Catalytic domain of the Protein Serine/ | 99.31 | |
| cd05601 | 330 | STKc_CRIK Catalytic domain of the Protein Serine/T | 99.31 | |
| cd05590 | 320 | STKc_nPKC_eta Catalytic domain of the Protein Seri | 99.3 | |
| cd05612 | 291 | STKc_PRKX_like Catalytic domain of PRKX-like Prote | 99.3 | |
| cd05102 | 338 | PTKc_VEGFR3 Catalytic domain of the Protein Tyrosi | 99.3 | |
| cd05591 | 321 | STKc_nPKC_epsilon Catalytic domain of the Protein | 99.3 | |
| cd05625 | 382 | STKc_LATS1 Catalytic domain of the Protein Serine/ | 99.3 | |
| cd07869 | 303 | STKc_PFTAIRE1 Catalytic domain of the Serine/Threo | 99.3 | |
| cd05624 | 331 | STKc_MRCK_beta Catalytic domain of the Protein Ser | 99.29 | |
| cd05615 | 323 | STKc_cPKC_alpha Catalytic domain of the Protein Se | 99.29 | |
| cd05585 | 312 | STKc_YPK1_like Catalytic domain of Yeast Protein K | 99.29 | |
| cd05597 | 331 | STKc_DMPK_like Catalytic domain of Myotonic Dystro | 99.29 | |
| cd05620 | 316 | STKc_nPKC_delta Catalytic domain of the Protein Se | 99.29 | |
| cd07871 | 288 | STKc_PCTAIRE3 Catalytic domain of the Serine/Threo | 99.29 | |
| cd05115 | 257 | PTKc_Zap-70 Catalytic domain of the Protein Tyrosi | 99.29 | |
| cd05604 | 325 | STKc_SGK3 Catalytic domain of the Protein Serine/T | 99.29 | |
| cd05573 | 350 | STKc_ROCK_NDR_like Catalytic domain of ROCK- and N | 99.29 | |
| cd05599 | 364 | STKc_NDR_like Catalytic domain of Nuclear Dbf2-Rel | 99.29 | |
| KOG0660 | 359 | consensus Mitogen-activated protein kinase [Signal | 99.29 | |
| cd05592 | 316 | STKc_nPKC_theta_delta Catalytic domain of the Prot | 99.28 | |
| COG1718 | 268 | RIO1 Serine/threonine protein kinase involved in c | 99.28 | |
| cd07878 | 343 | STKc_p38beta_MAPK11 Catalytic domain of the Serine | 99.28 | |
| cd05629 | 377 | STKc_NDR_like_fungal Catalytic domain of Fungal Nu | 99.28 | |
| cd05602 | 325 | STKc_SGK1 Catalytic domain of the Protein Serine/T | 99.28 | |
| cd05622 | 371 | STKc_ROCK1 Catalytic domain of the Protein Serine/ | 99.28 | |
| cd05596 | 370 | STKc_ROCK Catalytic domain of the Protein Serine/T | 99.28 | |
| cd05616 | 323 | STKc_cPKC_beta Catalytic domain of the Protein Ser | 99.28 | |
| cd05575 | 323 | STKc_SGK Catalytic domain of the Protein Serine/Th | 99.28 | |
| KOG0591 | 375 | consensus NIMA (never in mitosis)-related G2-speci | 99.27 | |
| cd05608 | 280 | STKc_GRK1 Catalytic domain of the Protein Serine/T | 99.27 | |
| KOG1187 | 361 | consensus Serine/threonine protein kinase [Signal | 99.27 | |
| cd05603 | 321 | STKc_SGK2 Catalytic domain of the Protein Serine/T | 99.27 | |
| cd05618 | 329 | STKc_aPKC_iota Catalytic domain of the Protein Ser | 99.27 | |
| COG0478 | 304 | RIO-like serine/threonine protein kinase fused to | 99.26 | |
| cd05586 | 330 | STKc_Sck1_like Catalytic domain of Suppressor of l | 99.26 | |
| cd05617 | 327 | STKc_aPKC_zeta Catalytic domain of the Protein Ser | 99.26 | |
| cd05588 | 329 | STKc_aPKC Catalytic domain of the Protein Serine/T | 99.26 | |
| cd05589 | 324 | STKc_PKN Catalytic domain of the Protein Serine/Th | 99.26 | |
| cd06657 | 292 | STKc_PAK4 Catalytic domain of the Protein Serine/T | 99.25 | |
| KOG0585 | 576 | consensus Ca2+/calmodulin-dependent protein kinase | 99.25 | |
| cd07872 | 309 | STKc_PCTAIRE2 Catalytic domain of the Serine/Threo | 99.25 | |
| KOG0198 | 313 | consensus MEKK and related serine/threonine protei | 99.25 | |
| cd06649 | 331 | PKc_MEK2 Catalytic domain of the dual-specificity | 99.24 | |
| cd05069 | 260 | PTKc_Yes Catalytic domain of the Protein Tyrosine | 99.23 | |
| KOG0032 | 382 | consensus Ca2+/calmodulin-dependent protein kinase | 99.23 | |
| cd05605 | 285 | STKc_GRK4_like Catalytic domain of G protein-coupl | 99.23 | |
| cd05070 | 260 | PTKc_Fyn_Yrk Catalytic domain of the Protein Tyros | 99.23 | |
| cd05623 | 332 | STKc_MRCK_alpha Catalytic domain of the Protein Se | 99.23 | |
| cd05068 | 261 | PTKc_Frk_like Catalytic domain of Fyn-related kina | 99.23 | |
| PRK13184 | 932 | pknD serine/threonine-protein kinase; Reviewed | 99.23 | |
| cd05081 | 284 | PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of | 99.23 | |
| cd05607 | 277 | STKc_GRK7 Catalytic domain of the Protein Serine/T | 99.23 | |
| KOG1165 | 449 | consensus Casein kinase (serine/threonine/tyrosine | 99.22 | |
| cd05632 | 285 | STKc_GRK5 Catalytic domain of the Protein Serine/T | 99.22 | |
| PTZ00426 | 340 | cAMP-dependent protein kinase catalytic subunit; P | 99.22 | |
| cd05104 | 375 | PTKc_Kit Catalytic domain of the Protein Tyrosine | 99.22 | |
| cd05582 | 318 | STKc_RSK_N N-terminal catalytic domain of the Prot | 99.21 | |
| PRK09605 | 535 | bifunctional UGMP family protein/serine/threonine | 99.21 | |
| KOG0582 | 516 | consensus Ste20-like serine/threonine protein kina | 99.21 | |
| cd05071 | 262 | PTKc_Src Catalytic domain of the Protein Tyrosine | 99.21 | |
| cd05114 | 256 | PTKc_Tec_Rlk Catalytic domain of the Protein Tyros | 99.21 | |
| PTZ00267 | 478 | NIMA-related protein kinase; Provisional | 99.21 | |
| cd05067 | 260 | PTKc_Lck_Blk Catalytic domain of the Protein Tyros | 99.21 | |
| PF00069 | 260 | Pkinase: Protein kinase domain Protein kinase; unc | 99.21 | |
| cd06635 | 317 | STKc_TAO1 Catalytic domain of the Protein Serine/T | 99.21 | |
| cd05108 | 316 | PTKc_EGFR Catalytic domain of the Protein Tyrosine | 99.2 | |
| cd06629 | 272 | STKc_MAPKKK_Bck1_like Catalytic domain of fungal B | 99.2 | |
| cd07848 | 287 | STKc_CDKL5 Catalytic domain of the Serine/Threonin | 99.2 | |
| cd05059 | 256 | PTKc_Tec_like Catalytic domain of Tec-like Protein | 99.2 | |
| cd05064 | 266 | PTKc_EphR_A10 Catalytic domain of the Protein Tyro | 99.2 | |
| cd06644 | 292 | STKc_STK10_LOK Catalytic domain of the Protein Ser | 99.2 | |
| KOG0201 | 467 | consensus Serine/threonine protein kinase [Signal | 99.2 | |
| KOG1989 | 738 | consensus ARK protein kinase family [Signal transd | 99.2 | |
| cd07874 | 355 | STKc_JNK3 Catalytic domain of the Serine/Threonine | 99.2 | |
| cd05079 | 284 | PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the | 99.19 | |
| cd05033 | 266 | PTKc_EphR Catalytic domain of Ephrin Receptor Prot | 99.19 | |
| cd05112 | 256 | PTKc_Itk Catalytic domain of the Protein Tyrosine | 99.19 | |
| cd00192 | 262 | PTKc Catalytic domain of Protein Tyrosine Kinases. | 99.19 | |
| cd05040 | 257 | PTKc_Ack_like Catalytic domain of the Protein Tyro | 99.19 | |
| cd06650 | 333 | PKc_MEK1 Catalytic domain of the dual-specificity | 99.19 | |
| cd05619 | 316 | STKc_nPKC_theta Catalytic domain of the Protein Se | 99.19 | |
| cd05113 | 256 | PTKc_Btk_Bmx Catalytic domain of the Protein Tyros | 99.19 | |
| cd07876 | 359 | STKc_JNK2 Catalytic domain of the Serine/Threonine | 99.18 | |
| cd05122 | 253 | PKc_STE Catalytic domain of STE family Protein Kin | 99.18 | |
| cd05633 | 279 | STKc_GRK3 Catalytic domain of the Protein Serine/T | 99.18 | |
| cd06646 | 267 | STKc_MAP4K5 Catalytic domain of the Protein Serine | 99.18 | |
| KOG0588 | 786 | consensus Serine/threonine protein kinase [Cell cy | 99.18 | |
| cd05041 | 251 | PTKc_Fes_like Catalytic domain of Fes-like Protein | 99.18 | |
| cd05109 | 279 | PTKc_HER2 Catalytic domain of the Protein Tyrosine | 99.18 | |
| cd06641 | 277 | STKc_MST3 Catalytic domain of the Protein Serine/T | 99.18 | |
| cd05610 | 669 | STKc_MASTL Catalytic domain of the Protein Serine/ | 99.18 | |
| KOG0197 | 468 | consensus Tyrosine kinases [Signal transduction me | 99.17 | |
| KOG0694 | 694 | consensus Serine/threonine protein kinase [Signal | 99.17 | |
| cd06642 | 277 | STKc_STK25-YSK1 Catalytic domain of the Protein Se | 99.17 | |
| cd06611 | 280 | STKc_SLK_like Catalytic domain of Ste20-like kinas | 99.17 | |
| cd06640 | 277 | STKc_MST4 Catalytic domain of the Protein Serine/T | 99.17 | |
| cd05570 | 318 | STKc_PKC Catalytic domain of the Protein Serine/Th | 99.17 | |
| cd07862 | 290 | STKc_CDK6 Catalytic domain of the Serine/Threonine | 99.17 | |
| KOG0662 | 292 | consensus Cyclin-dependent kinase CDK5 [Intracellu | 99.17 | |
| cd07859 | 338 | STKc_TDY_MAPK_plant Catalytic domain of the Serine | 99.17 | |
| smart00219 | 258 | TyrKc Tyrosine kinase, catalytic domain. Phosphotr | 99.17 | |
| cd05083 | 254 | PTKc_Chk Catalytic domain of the Protein Tyrosine | 99.17 | |
| cd05034 | 261 | PTKc_Src_like Catalytic domain of Src kinase-like | 99.17 | |
| PHA03212 | 391 | serine/threonine kinase US3; Provisional | 99.16 | |
| cd05609 | 305 | STKc_MAST Catalytic domain of the Protein Serine/T | 99.16 | |
| cd05063 | 268 | PTKc_EphR_A2 Catalytic domain of the Protein Tyros | 99.16 | |
| cd07880 | 343 | STKc_p38gamma_MAPK12 Catalytic domain of the Serin | 99.16 | |
| cd07873 | 301 | STKc_PCTAIRE1 Catalytic domain of the Serine/Threo | 99.16 | |
| cd06631 | 265 | STKc_YSK4 Catalytic domain of the Protein Serine/T | 99.15 | |
| PRK01723 | 239 | 3-deoxy-D-manno-octulosonic-acid kinase; Reviewed | 99.15 | |
| cd05037 | 259 | PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the | 99.15 | |
| PHA03211 | 461 | serine/threonine kinase US3; Provisional | 99.15 | |
| KOG0610 | 459 | consensus Putative serine/threonine protein kinase | 99.15 | |
| cd05103 | 343 | PTKc_VEGFR2 Catalytic domain of the Protein Tyrosi | 99.15 | |
| cd05072 | 261 | PTKc_Lyn Catalytic domain of the Protein Tyrosine | 99.15 | |
| cd05082 | 256 | PTKc_Csk Catalytic domain of the Protein Tyrosine | 99.15 | |
| PHA03209 | 357 | serine/threonine kinase US3; Provisional | 99.15 | |
| KOG0611 | 668 | consensus Predicted serine/threonine protein kinas | 99.15 | |
| cd05066 | 267 | PTKc_EphR_A Catalytic domain of the Protein Tyrosi | 99.15 | |
| cd05630 | 285 | STKc_GRK6 Catalytic domain of the Protein Serine/T | 99.15 | |
| cd06625 | 263 | STKc_MEKK3_like Catalytic domain of MAP/ERK kinase | 99.15 | |
| KOG0587 | 953 | consensus Traf2- and Nck-interacting kinase and re | 99.15 | |
| cd05105 | 400 | PTKc_PDGFR_alpha Catalytic domain of the Protein T | 99.14 | |
| cd06645 | 267 | STKc_MAP4K3 Catalytic domain of the Protein Serine | 99.14 | |
| cd05087 | 269 | PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein | 99.14 | |
| cd06643 | 282 | STKc_SLK Catalytic domain of the Protein Serine/Th | 99.14 | |
| PTZ00283 | 496 | serine/threonine protein kinase; Provisional | 99.14 | |
| cd05097 | 295 | PTKc_DDR_like Catalytic domain of Discoidin Domain | 99.13 | |
| cd05073 | 260 | PTKc_Hck Catalytic domain of the Protein Tyrosine | 99.13 | |
| cd05057 | 279 | PTKc_EGFR_like Catalytic domain of Epidermal Growt | 99.13 | |
| cd05581 | 280 | STKc_PDK1 Catalytic domain of the Protein Serine/T | 99.13 | |
| cd06656 | 297 | STKc_PAK3 Catalytic domain of the Protein Serine/T | 99.13 | |
| cd05061 | 288 | PTKc_InsR Catalytic domain of the Protein Tyrosine | 99.13 | |
| cd07863 | 288 | STKc_CDK4 Catalytic domain of the Serine/Threonine | 99.13 | |
| cd00180 | 215 | PKc Catalytic domain of Protein Kinases. Protein K | 99.13 | |
| KOG0580 | 281 | consensus Serine/threonine protein kinase [Cell cy | 99.13 | |
| cd05076 | 274 | PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of th | 99.13 | |
| cd07875 | 364 | STKc_JNK1 Catalytic domain of the Serine/Threonine | 99.13 | |
| cd06917 | 277 | STKc_NAK1_like Catalytic domain of Fungal Nak1-lik | 99.13 | |
| cd05116 | 257 | PTKc_Syk Catalytic domain of the Protein Tyrosine | 99.13 | |
| cd05080 | 283 | PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the | 99.13 | |
| cd05580 | 290 | STKc_PKA Catalytic domain of the Protein Serine/Th | 99.13 | |
| cd05606 | 278 | STKc_beta_ARK Catalytic domain of the Protein Seri | 99.13 | |
| cd08529 | 256 | STKc_FA2-like Catalytic domain of the Protein Seri | 99.13 | |
| PTZ00036 | 440 | glycogen synthase kinase; Provisional | 99.13 | |
| cd06624 | 268 | STKc_ASK Catalytic domain of the Protein Serine/Th | 99.12 | |
| cd05090 | 283 | PTKc_Ror1 Catalytic domain of the Protein Tyrosine | 99.12 | |
| cd05106 | 374 | PTKc_CSF-1R Catalytic domain of the Protein Tyrosi | 99.12 | |
| PRK10345 | 210 | hypothetical protein; Provisional | 99.12 | |
| cd07868 | 317 | STKc_CDK8 Catalytic domain of the Serine/Threonine | 99.12 | |
| cd05613 | 290 | STKc_MSK1_N N-terminal catalytic domain of the Pro | 99.11 | |
| cd05056 | 270 | PTKc_FAK Catalytic domain of the Protein Tyrosine | 99.11 | |
| cd05049 | 280 | PTKc_Trk Catalytic domain of the Protein Tyrosine | 99.11 | |
| KOG0612 | 1317 | consensus Rho-associated, coiled-coil containing p | 99.11 | |
| cd06613 | 262 | STKc_MAP4K3_like Catalytic domain of Mitogen-activ | 99.11 | |
| cd07853 | 372 | STKc_NLK Catalytic domain of the Serine/Threonine | 99.11 | |
| cd07847 | 286 | STKc_CDKL1_4 Catalytic domain of the Serine/Threon | 99.11 | |
| cd07844 | 291 | STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like | 99.11 | |
| cd05039 | 256 | PTKc_Csk_like Catalytic domain of C-terminal Src k | 99.11 | |
| cd05077 | 262 | PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of th | 99.11 | |
| cd06658 | 292 | STKc_PAK5 Catalytic domain of the Protein Serine/T | 99.11 | |
| cd06654 | 296 | STKc_PAK1 Catalytic domain of the Protein Serine/T | 99.1 | |
| cd08224 | 267 | STKc_Nek6_Nek7 Catalytic domain of the Protein Ser | 99.1 | |
| cd06605 | 265 | PKc_MAPKK Catalytic domain of the dual-specificity | 99.1 | |
| cd05577 | 277 | STKc_GRK Catalytic domain of the Protein Serine/Th | 99.1 | |
| COG3642 | 204 | Mn2+-dependent serine/threonine protein kinase [Si | 99.1 | |
| cd06627 | 254 | STKc_Cdc7_like Catalytic domain of Cell division c | 99.1 | |
| cd05075 | 272 | PTKc_Axl Catalytic domain of the Protein Tyrosine | 99.1 | |
| cd06659 | 297 | STKc_PAK6 Catalytic domain of the Protein Serine/T | 99.1 | |
| cd06632 | 258 | STKc_MEKK1_plant Catalytic domain of the Protein S | 99.1 | |
| cd05038 | 284 | PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the P | 99.1 | |
| cd05054 | 337 | PTKc_VEGFR Catalytic domain of the Protein Tyrosin | 99.09 | |
| PF06176 | 229 | WaaY: Lipopolysaccharide core biosynthesis protein | 99.09 | |
| cd05065 | 269 | PTKc_EphR_B Catalytic domain of the Protein Tyrosi | 99.09 | |
| cd05101 | 304 | PTKc_FGFR2 Catalytic domain of the Protein Tyrosin | 99.09 | |
| cd05579 | 265 | STKc_MAST_like Catalytic domain of Microtubule-ass | 99.09 | |
| PLN03225 | 566 | Serine/threonine-protein kinase SNT7; Provisional | 99.09 | |
| cd05052 | 263 | PTKc_Abl Catalytic domain of the Protein Tyrosine | 99.09 | |
| cd05088 | 303 | PTKc_Tie2 Catalytic domain of the Protein Tyrosine | 99.09 | |
| cd05611 | 260 | STKc_Rim15_like Catalytic domain of fungal Rim15-l | 99.09 | |
| PHA02988 | 283 | hypothetical protein; Provisional | 99.09 | |
| cd06612 | 256 | STKc_MST1_2 Catalytic domain of the Protein Serine | 99.09 | |
| cd06619 | 279 | PKc_MKK5 Catalytic domain of the dual-specificity | 99.09 | |
| cd06638 | 286 | STKc_myosinIIIA Catalytic domain of the Protein Se | 99.09 | |
| cd06637 | 272 | STKc_TNIK Catalytic domain of the Protein Serine/T | 99.08 | |
| cd08219 | 255 | STKc_Nek3 Catalytic domain of the Protein Serine/T | 99.08 | |
| cd05062 | 277 | PTKc_IGF-1R Catalytic domain of the Protein Tyrosi | 99.08 | |
| KOG1167 | 418 | consensus Serine/threonine protein kinase of the C | 99.08 | |
| cd07832 | 286 | STKc_CCRK Catalytic domain of the Serine/Threonine | 99.08 | |
| cd05035 | 273 | PTKc_Axl_like Catalytic Domain of Axl-like Protein | 99.08 | |
| cd05148 | 261 | PTKc_Srm_Brk Catalytic domain of the Protein Tyros | 99.08 | |
| cd05048 | 283 | PTKc_Ror Catalytic Domain of the Protein Tyrosine | 99.08 | |
| cd07839 | 284 | STKc_CDK5 Catalytic domain of the Serine/Threonine | 99.08 | |
| cd07867 | 317 | STKc_CDC2L6 Catalytic domain of Serine/Threonine K | 99.08 | |
| cd07870 | 291 | STKc_PFTAIRE2 Catalytic domain of the Serine/Threo | 99.08 | |
| cd06628 | 267 | STKc_MAPKKK_Byr2_like Catalytic domain of fungal B | 99.08 | |
| cd07845 | 309 | STKc_CDK10 Catalytic domain of the Serine/Threonin | 99.07 | |
| cd08228 | 267 | STKc_Nek6 Catalytic domain of the Protein Serine/T | 99.07 | |
| cd06655 | 296 | STKc_PAK2 Catalytic domain of the Protein Serine/T | 99.07 | |
| cd08223 | 257 | STKc_Nek4 Catalytic domain of the Protein Serine/T | 99.07 | |
| cd06615 | 308 | PKc_MEK Catalytic domain of the dual-specificity P | 99.07 | |
| cd07861 | 285 | STKc_CDK1_euk Catalytic domain of the Serine/Threo | 99.07 | |
| cd05036 | 277 | PTKc_ALK_LTK Catalytic domain of the Protein Tyros | 99.07 | |
| KOG0196 | 996 | consensus Tyrosine kinase, EPH (ephrin) receptor f | 99.07 | |
| cd07837 | 295 | STKc_CdkB_plant Catalytic domain of the Serine/Thr | 99.07 | |
| KOG1164 | 322 | consensus Casein kinase (serine/threonine/tyrosine | 99.07 | |
| cd07879 | 342 | STKc_p38delta_MAPK13 Catalytic domain of the Serin | 99.07 | |
| PTZ00284 | 467 | protein kinase; Provisional | 99.07 | |
| cd05583 | 288 | STKc_MSK_N N-terminal catalytic domain of the Prot | 99.07 | |
| cd05098 | 307 | PTKc_FGFR1 Catalytic domain of the Protein Tyrosin | 99.07 | |
| cd05120 | 155 | APH_ChoK_like Aminoglycoside 3'-phosphotransferase | 99.07 | |
| cd05042 | 269 | PTKc_Aatyk Catalytic domain of the Protein Tyrosin | 99.07 | |
| cd05060 | 257 | PTKc_Syk_like Catalytic domain of Spleen Tyrosine | 99.07 | |
| cd07841 | 298 | STKc_CDK7 Catalytic domain of the Serine/Threonine | 99.07 | |
| cd05111 | 279 | PTK_HER3 Pseudokinase domain of the Protein Tyrosi | 99.07 | |
| cd05578 | 258 | STKc_Yank1 Catalytic domain of the Protein Serine/ | 99.06 | |
| cd06639 | 291 | STKc_myosinIIIB Catalytic domain of the Protein Se | 99.06 | |
| cd05110 | 303 | PTKc_HER4 Catalytic domain of the Protein Tyrosine | 99.06 | |
| cd08229 | 267 | STKc_Nek7 Catalytic domain of the Protein Serine/T | 99.06 | |
| cd06617 | 283 | PKc_MKK3_6 Catalytic domain of the dual-specificit | 99.05 | |
| cd06622 | 286 | PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS | 99.05 | |
| cd06630 | 268 | STKc_MEKK1 Catalytic domain of the Protein Serine/ | 99.05 | |
| cd07836 | 284 | STKc_Pho85 Catalytic domain of the Serine/Threonin | 99.05 | |
| cd06610 | 267 | STKc_OSR1_SPAK Catalytic domain of the Protein Ser | 99.05 | |
| cd05095 | 296 | PTKc_DDR2 Catalytic domain of the Protein Tyrosine | 99.05 | |
| cd06623 | 264 | PKc_MAPKK_plant_like Catalytic domain of Plant dua | 99.04 | |
| cd05091 | 283 | PTKc_Ror2 Catalytic domain of the Protein Tyrosine | 99.04 | |
| cd06614 | 286 | STKc_PAK Catalytic domain of the Protein Serine/Th | 99.04 | |
| cd05574 | 316 | STKc_phototropin_like Catalytic domain of Phototro | 99.04 | |
| cd06633 | 313 | STKc_TAO3 Catalytic domain of the Protein Serine/T | 99.04 | |
| KOG1166 | 974 | consensus Mitotic checkpoint serine/threonine prot | 99.04 | |
| cd07850 | 353 | STKc_JNK Catalytic domain of the Serine/Threonine | 99.04 | |
| cd06607 | 307 | STKc_TAO Catalytic domain of the Protein Serine/Th | 99.04 | |
| PHA03207 | 392 | serine/threonine kinase US3; Provisional | 99.04 | |
| PLN03224 | 507 | probable serine/threonine protein kinase; Provisio | 99.04 | |
| cd06626 | 264 | STKc_MEKK4 Catalytic domain of the Protein Serine/ | 99.04 | |
| cd06636 | 282 | STKc_MAP4K4_6 Catalytic domain of the Protein Seri | 99.03 | |
| cd05572 | 262 | STKc_cGK_PKG Catalytic domain of the Protein Serin | 99.03 | |
| cd06608 | 275 | STKc_myosinIII_like Catalytic domain of Class III | 99.03 | |
| cd06652 | 265 | STKc_MEKK2 Catalytic domain of the Protein Serine/ | 99.03 | |
| cd05107 | 401 | PTKc_PDGFR_beta Catalytic domain of the Protein Ty | 99.03 | |
| cd05055 | 302 | PTKc_PDGFR Catalytic domain of the Protein Tyrosin | 99.03 | |
| cd06648 | 285 | STKc_PAK_II Catalytic domain of the Protein Serine | 99.03 | |
| cd05051 | 296 | PTKc_DDR Catalytic domain of the Protein Tyrosine | 99.03 | |
| cd05089 | 297 | PTKc_Tie1 Catalytic domain of the Protein Tyrosine | 99.03 | |
| cd08221 | 256 | STKc_Nek9 Catalytic domain of the Protein Serine/T | 99.03 | |
| cd07833 | 288 | STKc_CDKL Catalytic domain of Cyclin-Dependent pro | 99.02 | |
| cd07843 | 293 | STKc_CDC2L1 Catalytic domain of the Serine/Threoni | 99.02 | |
| cd05047 | 270 | PTKc_Tie Catalytic domain of Tie Protein Tyrosine | 99.02 | |
| cd05093 | 288 | PTKc_TrkB Catalytic domain of the Protein Tyrosine | 99.02 | |
| cd06609 | 274 | STKc_MST3_like Catalytic domain of Mammalian Ste20 | 99.02 | |
| cd06653 | 264 | STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kina | 99.02 | |
| cd07877 | 345 | STKc_p38alpha_MAPK14 Catalytic domain of the Serin | 99.02 | |
| cd07840 | 287 | STKc_CDK9_like Catalytic domain of Cyclin-Dependen | 99.01 | |
| PF07714 | 259 | Pkinase_Tyr: Protein tyrosine kinase Protein kinas | 99.01 | |
| cd07864 | 302 | STKc_CDK12 Catalytic domain of the Serine/Threonin | 99.01 | |
| cd05086 | 268 | PTKc_Aatyk2 Catalytic domain of the Protein Tyrosi | 99.01 | |
| cd07846 | 286 | STKc_CDKL2_3 Catalytic domain of the Serine/Threon | 99.01 | |
| cd05050 | 288 | PTKc_Musk Catalytic domain of the Protein Tyrosine | 99.01 | |
| cd06606 | 260 | STKc_MAPKKK Catalytic domain of the Protein Serine | 99.01 | |
| cd05094 | 291 | PTKc_TrkC Catalytic domain of the Protein Tyrosine | 99.01 | |
| cd08217 | 265 | STKc_Nek2 Catalytic domain of the Protein Serine/T | 99.01 | |
| cd05058 | 262 | PTKc_Met_Ron Catalytic domain of the Protein Tyros | 99.0 | |
| smart00221 | 225 | STYKc Protein kinase; unclassified specificity. Ph | 99.0 | |
| cd05099 | 314 | PTKc_FGFR4 Catalytic domain of the Protein Tyrosin | 99.0 | |
| cd05053 | 293 | PTKc_FGFR Catalytic domain of the Protein Tyrosine | 99.0 | |
| cd08215 | 258 | STKc_Nek Catalytic domain of the Protein Serine/Th | 99.0 | |
| cd05032 | 277 | PTKc_InsR_like Catalytic domain of Insulin Recepto | 99.0 | |
| KOG1095 | 1025 | consensus Protein tyrosine kinase [Signal transduc | 99.0 | |
| cd05078 | 258 | PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain | 99.0 | |
| cd06620 | 284 | PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr | 98.99 | |
| KOG0983 | 391 | consensus Mitogen-activated protein kinase (MAPK) | 98.99 | |
| cd06647 | 293 | STKc_PAK_I Catalytic domain of the Protein Serine/ | 98.99 | |
| cd06634 | 308 | STKc_TAO2 Catalytic domain of the Protein Serine/T | 98.99 | |
| cd07865 | 310 | STKc_CDK9 Catalytic domain of the Serine/Threonine | 98.99 | |
| PTZ00024 | 335 | cyclin-dependent protein kinase; Provisional | 98.99 | |
| cd07860 | 284 | STKc_CDK2_3 Catalytic domain of the Serine/Threoni | 98.99 | |
| cd05045 | 290 | PTKc_RET Catalytic domain of the Protein Tyrosine | 98.98 | |
| cd06651 | 266 | STKc_MEKK3 Catalytic domain of the Protein Serine/ | 98.98 | |
| KOG1094 | 807 | consensus Discoidin domain receptor DDR1 [Signal t | 98.98 | |
| KOG0589 | 426 | consensus Serine/threonine protein kinase [General | 98.98 | |
| cd06621 | 287 | PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek | 98.98 | |
| KOG0664 | 449 | consensus Nemo-like MAPK-related serine/threonine | 98.98 | |
| KOG4721 | 904 | consensus Serine/threonine protein kinase, contain | 98.98 | |
| cd08227 | 327 | PK_STRAD_alpha Pseudokinase domain of STE20-relate | 98.97 | |
| cd05100 | 334 | PTKc_FGFR3 Catalytic domain of the Protein Tyrosin | 98.97 | |
| cd05123 | 250 | STKc_AGC Catalytic domain of AGC family Protein Se | 98.97 | |
| cd07851 | 343 | STKc_p38 Catalytic domain of the Serine/Threonine | 98.97 | |
| cd07835 | 283 | STKc_CDK1_like Catalytic domain of Cyclin-Dependen | 98.97 | |
| KOG1006 | 361 | consensus Mitogen-activated protein kinase (MAPK) | 98.96 | |
| cd05046 | 275 | PTK_CCK4 Pseudokinase domain of the Protein Tyrosi | 98.96 | |
| cd08220 | 256 | STKc_Nek8 Catalytic domain of the Protein Serine/T | 98.96 | |
| PHA03390 | 267 | pk1 serine/threonine-protein kinase 1; Provisional | 98.96 | |
| KOG0194 | 474 | consensus Protein tyrosine kinase [Signal transduc | 98.95 | |
| KOG0670 | 752 | consensus U4/U6-associated splicing factor PRP4 [R | 98.95 | |
| cd07831 | 282 | STKc_MOK Catalytic domain of the Serine/Threonine | 98.95 | |
| PLN00009 | 294 | cyclin-dependent kinase A; Provisional | 98.95 | |
| KOG0668 | 338 | consensus Casein kinase II, alpha subunit [Signal | 98.94 | |
| cd07830 | 283 | STKc_MAK_like Catalytic domain of Male germ cell-A | 98.94 | |
| cd05092 | 280 | PTKc_TrkA Catalytic domain of the Protein Tyrosine | 98.94 | |
| cd07866 | 311 | STKc_BUR1 Catalytic domain of the Serine/Threonine | 98.94 | |
| cd08528 | 269 | STKc_Nek10 Catalytic domain of the Protein Serine/ | 98.94 | |
| PTZ00266 | 1021 | NIMA-related protein kinase; Provisional | 98.93 | |
| cd05118 | 283 | STKc_CMGC Catalytic domain of CMGC family Serine/T | 98.93 | |
| cd05576 | 237 | STKc_RPK118_like Catalytic domain of the Protein S | 98.93 | |
| cd07849 | 336 | STKc_ERK1_2_like Catalytic domain of Extracellular | 98.92 | |
| cd05074 | 273 | PTKc_Tyro3 Catalytic domain of the Protein Tyrosin | 98.92 | |
| cd05044 | 269 | PTKc_c-ros Catalytic domain of the Protein Tyrosin | 98.92 | |
| cd08530 | 256 | STKc_CNK2-like Catalytic domain of the Protein Ser | 98.91 | |
| cd08218 | 256 | STKc_Nek1 Catalytic domain of the Protein Serine/T | 98.91 | |
| cd07842 | 316 | STKc_CDK8_like Catalytic domain of Cyclin-Dependen | 98.91 | |
| cd07829 | 282 | STKc_CDK_like Catalytic domain of Cyclin-Dependent | 98.9 | |
| cd07856 | 328 | STKc_Sty1_Hog1 Catalytic domain of the Serine/Thre | 98.9 | |
| PHA02882 | 294 | putative serine/threonine kinase; Provisional | 98.9 | |
| cd07854 | 342 | STKc_MAPK4_6 Catalytic domain of the Serine/Threon | 98.89 | |
| KOG3653 | 534 | consensus Transforming growth factor beta/activin | 98.89 | |
| KOG0669 | 376 | consensus Cyclin T-dependent kinase CDK9 [Cell cyc | 98.89 | |
| PHA03210 | 501 | serine/threonine kinase US3; Provisional | 98.88 | |
| cd05043 | 280 | PTK_Ryk Pseudokinase domain of Ryk (Receptor relat | 98.88 | |
| cd07838 | 287 | STKc_CDK4_6_like Catalytic domain of Cyclin-Depend | 98.87 | |
| cd07855 | 334 | STKc_ERK5 Catalytic domain of the Serine/Threonine | 98.87 | |
| cd07857 | 332 | STKc_MPK1 Catalytic domain of the Serine/Threonine | 98.87 | |
| cd06616 | 288 | PKc_MKK4 Catalytic domain of the dual-specificity | 98.87 | |
| KOG0586 | 596 | consensus Serine/threonine protein kinase [General | 98.86 | |
| cd06618 | 296 | PKc_MKK7 Catalytic domain of the dual-specificity | 98.86 | |
| KOG0599 | 411 | consensus Phosphorylase kinase gamma subunit [Carb | 98.85 | |
| cd08226 | 328 | PK_STRAD_beta Pseudokinase domain of STE20-related | 98.85 | |
| cd07852 | 337 | STKc_MAPK15 Catalytic domain of the Serine/Threoni | 98.85 | |
| cd07834 | 330 | STKc_MAPK Catalytic domain of the Serine/Threonine | 98.85 | |
| smart00220 | 244 | S_TKc Serine/Threonine protein kinases, catalytic | 98.84 | |
| cd08225 | 257 | STKc_Nek5 Catalytic domain of the Protein Serine/T | 98.84 | |
| KOG1035 | 1351 | consensus eIF-2alpha kinase GCN2 [Translation, rib | 98.83 | |
| KOG0579 | 1187 | consensus Ste20-like serine/threonine protein kina | 98.82 | |
| cd07858 | 337 | STKc_TEY_MAPK_plant Catalytic domain of the Serine | 98.81 | |
| KOG0596 | 677 | consensus Dual specificity; serine/threonine and t | 98.81 | |
| KOG4645 | 1509 | consensus MAPKKK (MAP kinase kinase kinase) SSK2 a | 98.79 | |
| cd08216 | 314 | PK_STRAD Pseudokinase domain of STE20-related kina | 98.79 | |
| KOG0199 | 1039 | consensus ACK and related non-receptor tyrosine ki | 98.79 | |
| KOG0984 | 282 | consensus Mitogen-activated protein kinase (MAPK) | 98.78 | |
| KOG3087 | 229 | consensus Serine/threonine protein kinase [General | 98.76 | |
| KOG0607 | 463 | consensus MAP kinase-interacting kinase and relate | 98.72 | |
| cd05154 | 223 | ACAD10_11_like Acyl-CoA dehydrogenase (ACAD) 10 an | 98.72 | |
| KOG0603 | 612 | consensus Ribosomal protein S6 kinase [Signal tran | 98.71 | |
| KOG4717 | 864 | consensus Serine/threonine protein kinase [Signal | 98.7 | |
| cd08222 | 260 | STKc_Nek11 Catalytic domain of the Protein Serine/ | 98.69 | |
| PRK15123 | 268 | lipopolysaccharide core heptose(I) kinase RfaP; Pr | 98.69 | |
| KOG0696 | 683 | consensus Serine/threonine protein kinase [Signal | 98.67 | |
| KOG0986 | 591 | consensus G protein-coupled receptor kinase [Signa | 98.65 | |
| KOG2052 | 513 | consensus Activin A type IB receptor, serine/threo | 98.65 | |
| KOG0576 | 829 | consensus Mitogen-activated protein kinase kinase | 98.64 | |
| KOG0604 | 400 | consensus MAP kinase-activated protein kinase 2 [S | 98.64 | |
| KOG2270 | 520 | consensus Serine/threonine protein kinase involved | 98.63 | |
| KOG1027 | 903 | consensus Serine/threonine protein kinase and endo | 98.62 | |
| KOG0690 | 516 | consensus Serine/threonine protein kinase [Signal | 98.61 | |
| KOG1152 | 772 | consensus Signal transduction serine/threonine kin | 98.6 | |
| KOG4279 | 1226 | consensus Serine/threonine protein kinase [Signal | 98.6 | |
| KOG2345 | 302 | consensus Serine/threonine protein kinase/TGF-beta | 98.6 | |
| KOG0033 | 355 | consensus Ca2+/calmodulin-dependent protein kinase | 98.59 | |
| KOG0666 | 438 | consensus Cyclin C-dependent kinase CDK8 [Transcri | 98.56 | |
| KOG1025 | 1177 | consensus Epidermal growth factor receptor EGFR an | 98.54 | |
| KOG1151 | 775 | consensus Tousled-like protein kinase [Signal tran | 98.52 | |
| PF06293 | 206 | Kdo: Lipopolysaccharide kinase (Kdo/WaaP) family; | 98.51 | |
| PRK10593 | 297 | hypothetical protein; Provisional | 98.5 | |
| KOG0695 | 593 | consensus Serine/threonine protein kinase [Signal | 98.46 | |
| KOG1345 | 378 | consensus Serine/threonine kinase [Signal transduc | 98.4 | |
| KOG1026 | 774 | consensus Nerve growth factor receptor TRKA and re | 98.4 | |
| PLN00113 | 968 | leucine-rich repeat receptor-like protein kinase; | 98.39 | |
| TIGR02172 | 226 | Fb_sc_TIGR02172 Fibrobacter succinogenes paralogou | 98.38 | |
| KOG2268 | 465 | consensus Serine/threonine protein kinase [Signal | 98.32 | |
| KOG4257 | 974 | consensus Focal adhesion tyrosine kinase FAK, cont | 98.31 | |
| KOG0665 | 369 | consensus Jun-N-terminal kinase (JNK) [Signal tran | 98.3 | |
| KOG0671 | 415 | consensus LAMMER dual specificity kinases [Signal | 98.28 | |
| KOG0614 | 732 | consensus cGMP-dependent protein kinase [Signal tr | 98.26 | |
| COG2112 | 201 | Predicted Ser/Thr protein kinase [Signal transduct | 98.24 | |
| PRK09550 | 401 | mtnK methylthioribose kinase; Reviewed | 98.24 | |
| cd05150 | 244 | APH Aminoglycoside 3'-phosphotransferase (APH). Th | 98.2 | |
| cd05155 | 235 | APH_ChoK_like_1 Uncharacterized bacterial proteins | 98.19 | |
| PRK05231 | 319 | homoserine kinase; Provisional | 98.13 | |
| PF01636 | 239 | APH: Phosphotransferase enzyme family This family | 98.12 | |
| COG0515 | 384 | SPS1 Serine/threonine protein kinase [General func | 98.09 | |
| PF03881 | 288 | Fructosamin_kin: Fructosamine kinase; InterPro: IP | 98.09 | |
| PLN02756 | 418 | S-methyl-5-thioribose kinase | 98.06 | |
| KOG4278 | 1157 | consensus Protein tyrosine kinase [Signal transduc | 98.03 | |
| KOG0584 | 632 | consensus Serine/threonine protein kinase [General | 98.03 | |
| PRK12396 | 409 | 5-methylribose kinase; Reviewed | 98.02 | |
| cd05157 | 235 | ETNK_euk Ethanolamine kinase (ETNK) in eukaryotes. | 97.98 | |
| TIGR02721 | 256 | ycfN_thiK thiamine kinase. Members of this family | 97.98 | |
| KOG0200 | 609 | consensus Fibroblast/platelet-derived growth facto | 97.91 | |
| KOG1290 | 590 | consensus Serine/threonine protein kinase [Signal | 97.91 | |
| PLN00181 | 793 | protein SPA1-RELATED; Provisional | 97.76 | |
| PRK06148 | 1013 | hypothetical protein; Provisional | 97.76 | |
| PF14531 | 288 | Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_ | 97.74 | |
| COG1686 | 389 | DacC D-alanyl-D-alanine carboxypeptidase [Cell env | 97.72 | |
| cd05153 | 296 | HomoserineK_II Homoserine Kinase, type II. Homoser | 97.71 | |
| PRK15442 | 284 | beta-lactamase TEM; Provisional | 97.67 | |
| cd05152 | 276 | MPH2' Macrolide 2'-Phosphotransferase (MPH2'). MPH | 97.65 | |
| cd05156 | 302 | ChoK_euk Choline Kinase (ChoK) in eukaryotes. The | 97.63 | |
| PLN02876 | 822 | acyl-CoA dehydrogenase | 97.61 | |
| PRK09902 | 216 | hypothetical protein; Provisional | 97.59 | |
| PF00768 | 240 | Peptidase_S11: D-alanyl-D-alanine carboxypeptidase | 97.57 | |
| TIGR01767 | 370 | MTRK 5-methylthioribose kinase. This enzyme is inv | 97.55 | |
| COG2334 | 331 | Putative homoserine kinase type II (protein kinase | 97.46 | |
| TIGR00938 | 307 | thrB_alt homoserine kinase, Neisseria type. Homose | 97.45 | |
| PRK10001 | 400 | D-alanyl-D-alanine carboxypeptidase fraction C; Pr | 97.42 | |
| COG3001 | 286 | Uncharacterized protein conserved in bacteria [Fun | 97.4 | |
| PRK06149 | 972 | hypothetical protein; Provisional | 97.37 | |
| PRK11397 | 388 | dacD D-alanyl-D-alanine carboxypeptidase; Provisio | 97.34 | |
| PLN02236 | 344 | choline kinase | 97.29 | |
| PF10707 | 199 | YrbL-PhoP_reg: PhoP regulatory network protein Yrb | 97.21 | |
| PRK10793 | 403 | D-alanyl-D-alanine carboxypeptidase fraction A; Pr | 97.19 | |
| PRK11768 | 325 | serine/threonine protein kinase; Provisional | 97.14 | |
| KOG4158 | 598 | consensus BRPK/PTEN-induced protein kinase [Signal | 96.8 | |
| PRK11669 | 306 | pbpG D-alanyl-D-alanine endopeptidase; Provisional | 96.79 | |
| COG3173 | 321 | Predicted aminoglycoside phosphotransferase [Gener | 96.61 | |
| PLN02421 | 330 | phosphotransferase, alcohol group as acceptor/kina | 96.59 | |
| KOG1240 | 1431 | consensus Protein kinase containing WD40 repeats [ | 96.41 | |
| KOG0590 | 601 | consensus Checkpoint kinase and related serine/thr | 96.05 | |
| PF04655 | 253 | APH_6_hur: Aminoglycoside/hydroxyurea antibiotic r | 95.97 | |
| PF01633 | 211 | Choline_kinase: Choline/ethanolamine kinase; Inter | 95.85 | |
| PTZ00384 | 383 | choline kinase; Provisional | 95.74 | |
| PTZ00296 | 442 | choline kinase; Provisional | 95.35 | |
| KOG0606 | 1205 | consensus Microtubule-associated serine/threonine | 95.15 | |
| KOG0603 | 612 | consensus Ribosomal protein S6 kinase [Signal tran | 94.9 | |
| PRK10271 | 188 | thiK thiamine kinase; Provisional | 94.59 | |
| KOG2269 | 531 | consensus Serine/threonine protein kinase [Signal | 94.56 | |
| PF12260 | 188 | PIP49_C: Protein-kinase domain of FAM69; InterPro: | 93.44 | |
| PF07914 | 414 | DUF1679: Protein of unknown function (DUF1679); In | 93.33 | |
| COG5072 | 488 | ALK1 Serine/threonine kinase of the haspin family | 93.02 | |
| PF13095 | 207 | FTA2: Kinetochore Sim4 complex subunit FTA2 | 92.87 |
| >COG0661 AarF Predicted unusual protein kinase [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.7e-73 Score=654.37 Aligned_cols=385 Identities=32% Similarity=0.556 Sum_probs=344.5
Q ss_pred HHHHHHHHHHHHHHHHhcChHHHHHHHHHhcCCCCCCHHHHHHHHHHHhCCCCCCHHHHHHHHHHHhCCChhhcccccCc
Q 002031 44 QRAHERNAKRVLNLIIKLEGLWVKLGQYLSTRADVLPEPYISLLKQLQDSLPPRPVQEVSQTIEREFGESMGGMFMDFVE 123 (977)
Q Consensus 44 ~~~~~~~a~~l~~~l~~lgg~~iK~GQ~ls~r~dllp~~~~~~L~~Lqd~~p~~~~~~v~~~l~~elg~~~~~~f~~~d~ 123 (977)
++..++.+++|+++|++|||+|||+||+||||+|++|++|+++|++|||+|||+|++++++++++++|.+++++|.+|++
T Consensus 51 ~~~~~~~~~rL~~~L~~LGPtfIK~GQ~LStR~Dl~p~e~~~eL~~LQD~vpp~~~~~~~~iie~eLG~~iee~F~eF~~ 130 (517)
T COG0661 51 EELREKRAERLRLALEELGPTFIKLGQILSTRPDLVPPEYAEELAKLQDRVPPFPFEEAERIIEEELGRPIEELFSEFEP 130 (517)
T ss_pred HHHhHhHHHHHHHHHHHhCCchhhhhhHHhcCccccCHHHHHHHHHhhcCCCCCCHHHHHHHHHHHhCCCHHHHHHHcCC
Confidence 34566788999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccccccccEEEEEEecCCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCC---CCCchhHHHHhhhcccccCcHH
Q 002031 124 TPLATASIAQVHRATLVDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQ---YDFNPIIDEWCKEAPKELDFNS 200 (977)
Q Consensus 124 ~piasaSigqV~~A~l~~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~---~~~~~~~~e~~~~l~~Eld~~~ 200 (977)
+|+|+|||||||+|++++|+.|||||||||+++.+..|+.+|+.+++++....+. +++..+++||.+.+..|+||++
T Consensus 131 ~PiAsASIaQVH~A~L~sG~~VAVKVqrPgi~~~i~~DL~il~~~a~~~~~~~~~~~~l~~~~vv~e~~~~l~~ElDy~~ 210 (517)
T COG0661 131 EPIASASIAQVHRAVLKSGEEVAVKVQRPGIRERIEADLKLLRRLARLIKRLPPGGRRLDLVEVVDEFEKRLREELDYRR 210 (517)
T ss_pred CchhhhhHhhheeEEecCCCEEEEEecCCChHHHHHHHHHHHHHHHHHHHHcCCccccCChHHHHHHHHHHHHHHhCHHH
Confidence 9999999999999999999999999999999999999999999999999988776 8999999999999999999999
Q ss_pred HHHHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeee--cCCceEEeeccCCCCCCChHHHHhcCCCHHHHHHHHHHHH
Q 002031 201 EAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ--SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY 278 (977)
Q Consensus 201 Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~--~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~ 278 (977)
||+|+++|+++|+ +.+.++||+||+ |+++||||||++|+++++...++..|.|.+.+++.++++|
T Consensus 211 EA~n~~~~~~nf~-------------~~~~v~VP~V~we~t~~~VLtmE~i~Gi~i~d~~~l~~~g~d~k~ia~~~~~~f 277 (517)
T COG0661 211 EAANAERFRENFK-------------DDPDVYVPKVYWEYTTRRVLTMEWIDGIKISDIAALKSAGIDRKELAELLVRAF 277 (517)
T ss_pred HHHHHHHHHHHcC-------------CCCCeEeceeehhccCCcEEEEEeeCCEecccHHHHHhcCCCHHHHHHHHHHHH
Confidence 9999999999997 467899999997 8999999999999999999999999999999999999999
Q ss_pred HHHHHhcCccccCCCCCCeEEccCCCCceEEEecccccccCHHHHHHHHHHHHHHHcCCHHHHHHHHHHcCcccC-CCcH
Q 002031 279 AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSSSMKQALAKMFFAAAEGDHVALLSAFAEMGLRLR-LDVP 357 (977)
Q Consensus 279 l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~~~r~~~~~l~~a~~~~d~~~~~~~~~~~g~~~~-~~~~ 357 (977)
++|++++||||+|||||||+|+.+ |+++++|||+++++++++|..++++++|+.++|++.+++.+.++|.... .+..
T Consensus 278 ~~q~~~dgffHaDpHpGNi~v~~~--g~i~~lDfGi~g~l~~~~r~~l~~~~~a~~~rD~~~v~~~~~~~G~~~~~~~~~ 355 (517)
T COG0661 278 LRQLLRDGFFHADPHPGNILVRSD--GRIVLLDFGIVGRLDPKFRRYLAELLLAFLNRDYDRVAELHVELGYVPPDTDRD 355 (517)
T ss_pred HHHHHhcCccccCCCccceEEecC--CcEEEEcCcceecCCHHHHHHHHHHHHHHHhhCHHHHHHHHHHhCCCCCccchH
Confidence 999999999999999999999966 9999999999999999999999999999999999999999999999753 3555
Q ss_pred HHHHHHHHHHHhccC-ChhhhHHHHHhHHHHHHhhHHHHHHHHHHhHHHHhhcCCCCCCCchHHHHHHHHHHHHHhhhcc
Q 002031 358 EQAMEVSTLFFRTSA-PANEAFETVKNLSEQRAKNLKVIQEKMKLNQKEVKRFNPVDAFPGDIVIFSRVLNLLRGLSSTM 436 (977)
Q Consensus 358 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~~~R~~~~leg~~~~L 436 (977)
....++..++-.... +.. .++ ..+.+.+.++ ...+|+ +++|++++++.|++.++||++++|
T Consensus 356 ~~~~~i~~~~~~~~~~~~~-------~~~-----~~~~~~~~~~----~~~~~~--~r~p~~l~ll~r~~~~vEg~~~~l 417 (517)
T COG0661 356 PLAAAIRAVLEPIYGKPLE-------EIS-----FGEILDKLFE----VARRFP--MRLPPELVLLQRTLLLVEGVGRQL 417 (517)
T ss_pred HHHHHHHHHHHhhhCCChh-------hcc-----HHHHHHHHHH----HHHhcC--ccCCHHHHHHHHHHHHHHHHHHhh
Confidence 555555444432211 111 111 1111122222 234444 789999999999999999999999
Q ss_pred CccchhhcccchhHHHHHhhhcCCC
Q 002031 437 NVRIVYLDIMRPFAEYVLQVGINKE 461 (977)
Q Consensus 437 ~p~~~~~~~~~~y~~~~l~~~~~~~ 461 (977)
+|++|++.++.||+.+....++.+.
T Consensus 418 dp~~~~~~~a~p~~~~~~~~~~~~~ 442 (517)
T COG0661 418 DPRFNLWAVAQPLLAKWLKKQLSPK 442 (517)
T ss_pred CccccHHHHhhHHHHHHHHHhhhHH
Confidence 9999999999999999999888765
|
|
| >PRK04750 ubiB putative ubiquinone biosynthesis protein UbiB; Reviewed | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.6e-69 Score=630.14 Aligned_cols=427 Identities=30% Similarity=0.412 Sum_probs=353.8
Q ss_pred hHHHHHHHHHHHHHHHHHHHHhhhh-hhhhhhhHHHHHH---HHHHHHHHHHHHHHHhcChHHHHHHHHHhcCCCCCCHH
Q 002031 7 YRRRMSVFSMAILIYLDYKAVQQRE-KWIKKSKISALWQ---RAHERNAKRVLNLIIKLEGLWVKLGQYLSTRADVLPEP 82 (977)
Q Consensus 7 ~~R~~~~~~~~~~~~~~y~~~~~r~-~~~~~~~~~~~~~---~~~~~~a~~l~~~l~~lgg~~iK~GQ~ls~r~dllp~~ 82 (977)
+.|..++++++.+..+++...+... ++.........|. ......|++|+.+|++|||+|||+||+||||+|++|++
T Consensus 4 ~~R~~~I~~v~~~yg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~rlr~aLe~LGp~fIKlGQ~LStR~DllP~~ 83 (537)
T PRK04750 4 LFRLYKIIRVFLRYGLDELILSHRLTRPLRLWRRSLFWMPNRHKDKPRGERLRLALEELGPIFVKFGQMLSTRRDLFPPD 83 (537)
T ss_pred hHHHHHHHHHHHHhChHHHhhhccccchhhhhhhhhhhhhcccccccHHHHHHHHHHHcCcHHHHHHHHHHcCcccCCHH
Confidence 4577777777766555543221110 1111000000011 11235689999999999999999999999999999999
Q ss_pred HHHHHHHHHhCCCCCCHHHHHHHHHHHhCCChhhcccccCccccccccccEEEEEEecC-CCEEEEEEecCChhhhhHhh
Q 002031 83 YISLLKQLQDSLPPRPVQEVSQTIEREFGESMGGMFMDFVETPLATASIAQVHRATLVD-GRQVVVKVQHQGIKTIILED 161 (977)
Q Consensus 83 ~~~~L~~Lqd~~p~~~~~~v~~~l~~elg~~~~~~f~~~d~~piasaSigqV~~A~l~~-G~~VAVKv~~p~i~~~~~~D 161 (977)
|+++|++|||+|||+|++++++++++++|.+++++|.+||++|+|+|||||||+|++++ |++|||||+||++.+.+..|
T Consensus 84 ~~~eL~~Lqd~vpp~~~~~~~~~ie~elG~~~~~~F~~fd~~PlasaSiaQVh~A~l~~~G~~VAVKV~rP~i~~~I~~D 163 (537)
T PRK04750 84 IADELALLQDRVPPFDGALARAIIEKALGGPVEEWFDDFDIKPLASASIAQVHFARLKDNGREVVVKVLRPDILPVIDAD 163 (537)
T ss_pred HHHHHHHHHcCCCCCCHHHHHHHHHHHhCCCHHHHHHhcChhhhcCCCccEEEEEEECCCCCEEEEEEeCcchHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999987 99999999999999999999
Q ss_pred HHHHHHHHHHHHhhCC---CCCCchhHHHHhhhcccccCcHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeee
Q 002031 162 LKNAKSIVDWIAWAEP---QYDFNPIIDEWCKEAPKELDFNSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ 238 (977)
Q Consensus 162 l~~l~~l~~~~~~~~~---~~~~~~~~~e~~~~l~~Eld~~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~ 238 (977)
+++|+.++.++++..+ .+++.++++|+.+.+.+|+||.+|++|+.+++++|. +.+.++||++|+
T Consensus 164 l~~l~~~a~~l~~~~~~~~~l~~~~~v~e~~~~l~~ElD~~~Ea~N~~~~~~~f~-------------~~~~v~VP~v~~ 230 (537)
T PRK04750 164 LALMYRLARWVERLLPDGRRLKPREVVAEFEKTLHDELDLMREAANASQLRRNFE-------------DSDMLYVPEVYW 230 (537)
T ss_pred HHHHHHHHHHHHHhCcccccCCHHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHcc-------------CCCCeecceeec
Confidence 9999999999987654 356788999999999999999999999999999886 345799999997
Q ss_pred --cCCceEEeeccCCCCCCChHHHHhcCCCHHHHHHHHHHHHHHHHHhcCccccCCCCCCeEEccCC--CCceEEEeccc
Q 002031 239 --SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAYAHQIYVDGFFNGDPHPGNFLVSKDP--PHRPILLDFGL 314 (977)
Q Consensus 239 --~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~l~~i~~~G~~H~D~hPgNIlv~~~~--~g~i~LiDFG~ 314 (977)
|+++||||||++|++++++..+...+.+.+.+++..++.++.|+|++||||+|||||||+|+.++ +++++++|||+
T Consensus 231 d~st~~VLvmE~i~G~~l~d~~~l~~~g~d~~~la~~~v~~~~~Qif~~GffHaDpHPGNIlv~~~g~~~~~i~llDFGi 310 (537)
T PRK04750 231 DYCSETVMVMERMYGIPVSDVAALRAAGTDMKLLAERGVEVFFTQVFRDGFFHADMHPGNIFVSYDPPENPRYIALDFGI 310 (537)
T ss_pred ccCCCceEEEeeecCccHHhHHHHHhcCCCHHHHHHHHHHHHHHHHHhCCeeeCCCChHHeEEecCCCCCCeEEEEecce
Confidence 99999999999999999987777888999999999999999999999999999999999998651 13899999999
Q ss_pred ccccCHHHHHHHHHHHHHHHcCCHHHHHHHHHHcCccc-CCCcHHHHHHHHHHHHhcc-CChhhhHHHHHhHHHHHHhhH
Q 002031 315 TKKLSSSMKQALAKMFFAAAEGDHVALLSAFAEMGLRL-RLDVPEQAMEVSTLFFRTS-APANEAFETVKNLSEQRAKNL 392 (977)
Q Consensus 315 ~~~l~~~~r~~~~~l~~a~~~~d~~~~~~~~~~~g~~~-~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 392 (977)
++.++++.|..+++++.|+..+|+..+++.+.++|... ..+..++..++..++.... .|.. +++ ..
T Consensus 311 vg~l~~~~r~~l~~~~~a~~~~D~~~v~~~~~~~g~~~~~~~~~~l~~~i~~~~~~~~~~~l~-------~i~-----~~ 378 (537)
T PRK04750 311 VGSLNKEDKRYLAENFLAFFNRDYRRVAELHVESGWVPPDTRVEELEFAIRAVCEPIFDKPLA-------EIS-----FG 378 (537)
T ss_pred EEECCHHHHHHHHHHHHHHHhcCHHHHHHHHHHhCCCCCCCCHHHHHHHHHHHHHHHhCCCcc-------ccc-----HH
Confidence 99999999999999999999999999999999999864 3455555555544332211 1211 111 11
Q ss_pred HHHHHHHHHhHHHHhhcCCCCCCCchHHHHHHHHHHHHHhhhccCccchhhcccchhHHHHHhhhcCCCCCc
Q 002031 393 KVIQEKMKLNQKEVKRFNPVDAFPGDIVIFSRVLNLLRGLSSTMNVRIVYLDIMRPFAEYVLQVGINKEPSV 464 (977)
Q Consensus 393 ~~~~~~~~~~~~~~~~~~~~~~~P~~~~~~~R~~~~leg~~~~L~p~~~~~~~~~~y~~~~l~~~~~~~~~~ 464 (977)
+.+.+.+.. ..+|+ +.+|++++++.|++.++||++++|||++|+++.++||+++.+.+++++....
T Consensus 379 ~~l~~l~~~----~r~~~--~~ip~~l~ll~ktl~~lEG~~r~LdP~~d~~~~a~p~l~~~~~~~~~~~~~~ 444 (537)
T PRK04750 379 HVLLRLFNT----ARRFN--VEIQPQLVLLQKTLLNVEGLGRQLDPQLDLWKTAKPFLERWMKEQVGPRALV 444 (537)
T ss_pred HHHHHHHHH----HHHCC--CcccHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHhcChHHHH
Confidence 223333333 45555 7899999999999999999999999999999999999999999999875543
|
|
| >TIGR01982 UbiB 2-polyprenylphenol 6-hydroxylase | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.8e-66 Score=596.64 Aligned_cols=381 Identities=30% Similarity=0.495 Sum_probs=334.8
Q ss_pred HHHHHHHHHHHhcChHHHHHHHHHhcCCCCCCHHHHHHHHHHHhCCCCCCHHHHHHHHHHHhCCChhhcccccCcccccc
Q 002031 49 RNAKRVLNLIIKLEGLWVKLGQYLSTRADVLPEPYISLLKQLQDSLPPRPVQEVSQTIEREFGESMGGMFMDFVETPLAT 128 (977)
Q Consensus 49 ~~a~~l~~~l~~lgg~~iK~GQ~ls~r~dllp~~~~~~L~~Lqd~~p~~~~~~v~~~l~~elg~~~~~~f~~~d~~pias 128 (977)
..|++++++|++|||+|||+||+||+|+|+||++|+++|++|||++||+|++++++++++++|.+++++|.+||++|+|+
T Consensus 48 ~~~~~l~~~l~~lGp~fiKlGQ~lS~r~dllp~~~~~~L~~Lqd~v~p~~~~~~~~~l~~elg~~~~~~F~~fd~~plas 127 (437)
T TIGR01982 48 SRGERLRLALEELGPTFIKFGQTLSTRADLLPADIAEELSLLQDRVPPFDFKVARKVIEAALGGPLEELFAEFEEKPLAA 127 (437)
T ss_pred cHHHHHHHHHHHcCchhHHHhHHHHhCcccCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHhCcCHHHHHhhCCCcceee
Confidence 56899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccEEEEEEecCCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCC---CCCCchhHHHHhhhcccccCcHHHHHHH
Q 002031 129 ASIAQVHRATLVDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEP---QYDFNPIIDEWCKEAPKELDFNSEAENT 205 (977)
Q Consensus 129 aSigqV~~A~l~~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~---~~~~~~~~~e~~~~l~~Eld~~~Ea~n~ 205 (977)
|||||||+|++++|++||||||||++.+.+..|+++++.++.++.+..+ .+++..+++||...+.+|+||.+||+|+
T Consensus 128 aSigQVh~A~l~~G~~VaVKv~rp~i~~~i~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eldf~~Ea~n~ 207 (437)
T TIGR01982 128 ASIAQVHRARLVDGKEVAVKVLRPGIEKTIAADIALLYRLARIVERLSPDSRRLRPTEVVKEFEKTLRRELDLRREAANA 207 (437)
T ss_pred eehhheEEEEecCCCEEEEEeeCCCcHHHHHHHHHHHHHHHHHHHHhCccccccCHHHHHHHHHHHHHHHHCHHHHHHHH
Confidence 9999999999999999999999999999999999999999998887644 3577899999999999999999999999
Q ss_pred HHHHHHhCCCCCCCCCCCCCCCCCCeEeceeee--cCCceEEeeccCCCCCCChHHHHhcCCCHHHHHHHHHHHHHHHHH
Q 002031 206 RIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ--SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAYAHQIY 283 (977)
Q Consensus 206 ~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~--~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~l~~i~ 283 (977)
.+|+++++ +.+.++||++|+ |+++||||||++|.+|.+.......+.+...++..+++.++.|+|
T Consensus 208 ~~~~~~~~-------------~~~~v~vP~v~~~~~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~ia~~~~~~~l~ql~ 274 (437)
T TIGR01982 208 SELGENFK-------------NDPGVYVPEVYWDRTSERVLTMEWIDGIPLSDIAALDEAGLDRKALAENLARSFLNQVL 274 (437)
T ss_pred HHHHHhcC-------------CCCCEEeCCEehhhcCCceEEEEeECCcccccHHHHHhcCCCHHHHHHHHHHHHHHHHH
Confidence 99999886 356899999997 899999999999999999876655667788899999999999999
Q ss_pred hcCccccCCCCCCeEEccCCCCceEEEecccccccCHHHHHHHHHHHHHHHcCCHHHHHHHHHHcCccc-CCCcHHHHHH
Q 002031 284 VDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSSSMKQALAKMFFAAAEGDHVALLSAFAEMGLRL-RLDVPEQAME 362 (977)
Q Consensus 284 ~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~~~r~~~~~l~~a~~~~d~~~~~~~~~~~g~~~-~~~~~~~~~~ 362 (977)
.+|+||+|||||||+++++ ++++|+|||+++.++++.+..+.+++.++..+|++.+.+.+.++|+.. ..|.+.+..+
T Consensus 275 ~~g~~H~D~hPgNilv~~~--g~i~liDfG~~~~l~~~~r~~l~~l~~a~~~~D~~~l~~~l~~~g~~~~~~d~~~~~~~ 352 (437)
T TIGR01982 275 RDGFFHADLHPGNIFVLKD--GKIIALDFGIVGRLSEEDRRYLAEILYGFLNRDYRRVAEVHFDAGYVPSDTDMAEFEQA 352 (437)
T ss_pred hCCceeCCCCcccEEECCC--CcEEEEeCCCeeECCHHHHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCHHHHHHH
Confidence 9999999999999999855 899999999999999999999999999999999999999999999864 3455555555
Q ss_pred HHHHHHhccC-ChhhhHHHHHhHHHHHHhhHHHHHHHHHHhHHHHhhcCCCCCCCchHHHHHHHHHHHHHhhhccCccch
Q 002031 363 VSTLFFRTSA-PANEAFETVKNLSEQRAKNLKVIQEKMKLNQKEVKRFNPVDAFPGDIVIFSRVLNLLRGLSSTMNVRIV 441 (977)
Q Consensus 363 ~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~~~R~~~~leg~~~~L~p~~~ 441 (977)
+..++..... +. .+++ ..+.+.+.+.. +.+++ +++|++++++.|++.++||++++|||++|
T Consensus 353 ~~~~~~~~~~~~~-------~~~~-----~~~~~~~~~~~----~~~~~--~~~p~~~~~l~r~l~~leg~~~~L~p~~~ 414 (437)
T TIGR01982 353 IRAIGEPIFGQPL-------KEIS-----VGRLLAGLFKI----TRDFN--MELQPQLLLLQKTLLTVEGVGRQLDPDLN 414 (437)
T ss_pred HHHHHHHHhCCCh-------hhCC-----HHHHHHHHHHH----HHHCC--ccCCHHHHHHHHHHHHHHHHHHHhCCCCC
Confidence 5544322211 11 1111 11222333332 34444 68999999999999999999999999999
Q ss_pred hhcccchhHHHHHhhhcCCCC
Q 002031 442 YLDIMRPFAEYVLQVGINKEP 462 (977)
Q Consensus 442 ~~~~~~~y~~~~l~~~~~~~~ 462 (977)
+.+.++||+.+.+.++++++.
T Consensus 415 ~~~~~~p~~~~~~~~~~~~~~ 435 (437)
T TIGR01982 415 MWKVAEPFVKRWIRKRLGPKA 435 (437)
T ss_pred HHHHHHHHHHHHHHhhcChhc
Confidence 999999999999998887654
|
This model represents the enzyme (UbiB) which catalyzes the first hydroxylation step in the ubiquinone biosynthetic pathway in bacteria. It is believed that the reaction is 2-polyprenylphenol - 6-hydroxy-2-polyprenylphenol. This model finds hits primarily in the proteobacteria. The gene is also known as AarF in certain species. |
| >KOG1235 consensus Predicted unusual protein kinase [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3e-66 Score=595.67 Aligned_cols=403 Identities=32% Similarity=0.522 Sum_probs=338.2
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHhcChHHHHHHHHHhcCCCCCCHHHHHHHHHHHhCCCCCCHHHHHHHHHHHhCCChh
Q 002031 36 KSKISALWQRAHERNAKRVLNLIIKLEGLWVKLGQYLSTRADVLPEPYISLLKQLQDSLPPRPVQEVSQTIEREFGESMG 115 (977)
Q Consensus 36 ~~~~~~~~~~~~~~~a~~l~~~l~~lgg~~iK~GQ~ls~r~dllp~~~~~~L~~Lqd~~p~~~~~~v~~~l~~elg~~~~ 115 (977)
.+.+.......|.+.|++|++++++|||+|||+||+||+|+|++|+||.++|+.|||++||+|++++.+++++|+|.+++
T Consensus 79 ~e~~~~~~~~~~~~~a~~L~e~~~~nGg~yIKlGQ~lst~~dllP~Eyv~~L~~LqD~~Pp~~~ee~~~i~e~ElG~~ie 158 (538)
T KOG1235|consen 79 SESRLSKLSKVLLSAAERLLELFLRNGGTYIKLGQHLSTRPDLLPKEYVKTLSELQDQAPPFPWEEAFKIFEEELGAPIE 158 (538)
T ss_pred hhhhHHHHHHHHHHHHHHHHHHHHHcCCeEEEechhhccccccCcHHHHHHHHHHhccCCCCCHHHHHHHHHHHhCCCHH
Confidence 34555666778888889999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hcccccCccccccccccEEEEEEecCCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccc
Q 002031 116 GMFMDFVETPLATASIAQVHRATLVDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKE 195 (977)
Q Consensus 116 ~~f~~~d~~piasaSigqV~~A~l~~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~E 195 (977)
++|.+||++|||+||+||||+|++++|+.||||||||++++.+..|+.+++.++..+.+..|.+++.++++|+.+.+.+|
T Consensus 159 ~if~~f~~~piaaASlaQVhrA~L~~G~~VaVKVQ~P~l~~~~~~Dl~~~~~~~~~l~k~~p~~~~~~lvdE~~~~L~~E 238 (538)
T KOG1235|consen 159 DIFSEFDEEPIAAASLAQVHRARLKNGEDVAVKVQHPGLEKLIMLDLRNLRLLAKVLQKFFPDFDLVWLVDEIAKSLPQE 238 (538)
T ss_pred HHHHhcCcchhhhcchhheEEEEecCCCEEEEEecCcChHHHHHHHHHHHHHHHHHHHHhCcCCchhhHHHHHHhhhHhh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCcHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeee--cCCceEEeeccCCCCCCChHHHHhcCCCHHHHHHH
Q 002031 196 LDFNSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ--SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEE 273 (977)
Q Consensus 196 ld~~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~--~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~ 273 (977)
+||.+||+|.++++++|++.+ ....|+||+||+ |+++|||||||+|++++|++.++..++++..++..
T Consensus 239 LDF~~EA~Nae~~~~~f~~~~----------~~~~V~VP~Vy~~~st~RVLtME~~~G~~i~Dl~~i~~~gi~~~~i~~~ 308 (538)
T KOG1235|consen 239 LDFTKEAKNAERFRENFKDFS----------LLTYVLVPKVYWDLSTKRVLTMEYVDGIKINDLDAIDKRGISPHDILNK 308 (538)
T ss_pred cchHHHHHhHHHHHHHHHhcc----------cccceeCCeehhhcCcceEEEEEecCCccCCCHHHHHHcCCCHHHHHHH
Confidence 999999999999999998432 123699999998 89999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhcCccccCCCCCCeEEccC--CCCceEEEecccccccCHHHHHHHHHHHHHHHcCCHHHHHHHHHHcCcc
Q 002031 274 ITRAYAHQIYVDGFFNGDPHPGNFLVSKD--PPHRPILLDFGLTKKLSSSMKQALAKMFFAAAEGDHVALLSAFAEMGLR 351 (977)
Q Consensus 274 l~~~~l~~i~~~G~~H~D~hPgNIlv~~~--~~g~i~LiDFG~~~~l~~~~r~~~~~l~~a~~~~d~~~~~~~~~~~g~~ 351 (977)
+.++|++|||.+||||||||||||+|+++ ++++++++|||+++.+++..|..|+++|+|+...|...+...+..+|+.
T Consensus 309 l~~~~~~qIf~~GffHaDPHPGNilv~~~~~~~~~ivllDhGl~~~is~~~r~~~~~~~~a~~~~d~~~~~~~~~~~g~~ 388 (538)
T KOG1235|consen 309 LVEAYLEQIFKTGFFHADPHPGNILVRPNPEGDEEIVLLDHGLYAVISHKTRKDYAELWLALVFEDEKAMQALAEQLGLG 388 (538)
T ss_pred HHHHHHHHHHhcCCccCCCCCCcEEEecCCCCCccEEEEcccccccccHHHHHHHHHHHHHHhcccHHHHHHHHHHhccc
Confidence 99999999999999999999999999964 3578999999999999999999999999999999999999999999987
Q ss_pred cCCCcHHHHHHHHHHHHhccCChhhhHHHHHhHHHHHHhhHHHHHHHHHHhHHHHhhcCCCCCCCchHHHHHHHHHHHHH
Q 002031 352 LRLDVPEQAMEVSTLFFRTSAPANEAFETVKNLSEQRAKNLKVIQEKMKLNQKEVKRFNPVDAFPGDIVIFSRVLNLLRG 431 (977)
Q Consensus 352 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~~~R~~~~leg 431 (977)
.+.+.+.++.++.........+.. ....+.........+.+.....+....+. +.++|..+.++.|+..++++
T Consensus 389 ~d~~~~~fa~~l~~~~~~s~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------L~~~p~~i~li~k~~~l~r~ 461 (538)
T KOG1235|consen 389 LDDLYPLFATALTGRPWDSVIGAG-ITKYLKGLEEDADENQKIASAKFPGISQL------LRRMPREILLILKTNDLLRG 461 (538)
T ss_pred cchhhhhhHHHHhCCchhhccccc-hhhhhhhhhhhhhhHHHHHHHHhhHHHHH------HHhchHhhhhhcccHHHHHh
Confidence 544445454444332222211100 00001111111111111122222211111 24679999999999999999
Q ss_pred hhhccCccchhhcccchhHHHHHh
Q 002031 432 LSSTMNVRIVYLDIMRPFAEYVLQ 455 (977)
Q Consensus 432 ~~~~L~p~~~~~~~~~~y~~~~l~ 455 (977)
+...++...+....+..+...+++
T Consensus 462 ~~~~l~~~~~~~~~f~~~~~~~~~ 485 (538)
T KOG1235|consen 462 LSSNLGIPSSLERSFLEMARLCLR 485 (538)
T ss_pred HHHHhccccccchHHHHHHHHHHH
Confidence 999999998865455555555554
|
|
| >PRK11289 ampC beta-lactamase/D-alanine carboxypeptidase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=6e-47 Score=431.93 Aligned_cols=240 Identities=22% Similarity=0.276 Sum_probs=202.3
Q ss_pred cchHHHHHHHHHHHhccCCCccceEEEEEecCeeEEEeeccccCCCCCCCCCCCCcceeecchHHHHHHHHHHHHHCCCc
Q 002031 475 HSDVEAKLRDFLVELGNDGKILGIQVCAYKDGEVIIDTSAGMLGRYDPRPVQPDSLFPVFSVTKGITAGMLHWLVDNGKL 554 (977)
Q Consensus 475 ~~~~~~~l~~~l~~~~~~~~~pG~svaVv~~g~~v~~~~~G~~~~~~~~~~t~~T~f~i~SiTK~~ta~~v~~lv~~G~l 554 (977)
..++.+.+++.+++.++++.+||++++|+++|++++. +||+++...+.|++++|+|+|||+||+||++++++|+|+|+|
T Consensus 28 ~~~~~~~vd~~i~~~~~~~~~pG~~vaV~~~g~~~~~-~~G~~~~~~~~p~~~dT~f~iaSvTK~fTa~~i~~Lve~G~L 106 (384)
T PRK11289 28 PQQLKDIVDRTITPLMEEQDIPGMAVAVIYNGKPYYF-NYGVADKATGQPVTQDTLFELGSVSKTFTATLAGYAQARGEL 106 (384)
T ss_pred hHHHHHHHHHHHHHHHHhCCCCeEEEEEEECCEEEEE-eeeecccccCCCCCCCCEEeeeechHHHHHHHHHHHHHCCCC
Confidence 3477889999999999999999999999999998875 899999999999999999999999999999999999999999
Q ss_pred CcCCchhhhccccccCCCCCCcHHHHhcCcCC-CCCCcCCCCCCCCcCCCCHHHHHHHHHccCCCCCCCCceecccCcHH
Q 002031 555 KLEENIANIWPEFKSNGKDLIKVHHVLNHTSG-LHNVSVDLSSENPLLICDWDECLNRIALSAPETEPGQEQLYHYLSFG 633 (977)
Q Consensus 555 ~ld~~v~~ylP~~~~~~~~~iTir~LLsHtSG-l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~pG~~~~Ysn~~~~ 633 (977)
+|||||.+|||+|....+++|||||||+|||| ++...+ ....+.+++++.+...++.++||+.|.|||.+|.
T Consensus 107 ~Lddpv~~ylP~~~~~~~~~ITir~LLtHtSGg~p~~~~-------~~~~~~~~l~~~l~~~~~~~~PG~~~~YSn~~y~ 179 (384)
T PRK11289 107 SLSDPASKYLPELKGSPFDGITLLHLATYTAGGLPLQVP-------DEVKDDAQLLRYFQAWQPAYAPGTQRLYSNPSIG 179 (384)
T ss_pred CCCCcHHHhCcccCCCCcCCeEHHHHhccccCCCcccCC-------cccCCHHHHHHHHHhCCCCCCCCCCeeechHHHH
Confidence 99999999999998766778999999999995 875422 1235678888999888999999999999999998
Q ss_pred HHHHHHHHHHhCCCHHHHHHHHcccccCCCCccCCCCCCCcccCcceecccCCccccccCCCCCCCCCCCCCCCcchhhh
Q 002031 634 WLCGGIIERASGKKFQEILEEGIIQPLSIDGELYIGIPPGVESRLASLTIDTDDLNKVSGINNRPDLRLPSSFQPDKISQ 713 (977)
Q Consensus 634 ~llg~iiE~vtG~~~~~~l~~~if~PLGm~~t~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~p~~~~p~~~~~~~~~~ 713 (977)
|||.|||++||++|++|++++||+||||++|.+ ..+.....+.+.+|...... .. .
T Consensus 180 -lLg~iiE~vtg~~~~~~l~~~I~~PLGM~~T~~-~~~~~~~~~~a~gy~~~g~~--~~---~----------------- 235 (384)
T PRK11289 180 -LFGYLAAKAMGQPFEQLMEQRLFPPLGLTHTYI-NVPEAEMADYAQGYNKEGKP--VR---V----------------- 235 (384)
T ss_pred -HHHHHHHHHHCcCHHHHHHHhhhhhcCCCcccc-CCCccccccceeeeccCCCc--ee---c-----------------
Confidence 999999999999999999999999999999855 34445556677666432211 00 0
Q ss_pred hhhcccccccchhccccccCccceecCHHHHHHHHHHHHcCCCCC
Q 002031 714 LAAITPAVFNMLNIRRAIIPAANGHCSARALARYYAALADGGVVP 758 (977)
Q Consensus 714 ~~~~~~~~~~~~~~~~~~~~agG~~sTa~Dlar~~~~ll~~g~~~ 758 (977)
.+.+ ...|+||++||++||+||++++++++.++
T Consensus 236 ----------~~~~--~~~~aGgl~ST~~Dl~~f~~all~~~~l~ 268 (384)
T PRK11289 236 ----------NPGV--LDAEAYGVKSTAADMLRFVQANLGPQDLD 268 (384)
T ss_pred ----------CCCc--ccCCceeeEECHHHHHHHHHHHcCCCCCC
Confidence 0000 11278999999999999999999987653
|
|
| >PRK10662 beta-lactam binding protein AmpH; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.5e-46 Score=427.20 Aligned_cols=248 Identities=18% Similarity=0.218 Sum_probs=200.4
Q ss_pred CCcchHHHHHHHHHHHhccCCCccceEEEEEecCeeEEEeeccccCCCCCCCCCCCCcceeecchHHHHHHHHHHHHHCC
Q 002031 473 PIHSDVEAKLRDFLVELGNDGKILGIQVCAYKDGEVIIDTSAGMLGRYDPRPVQPDSLFPVFSVTKGITAGMLHWLVDNG 552 (977)
Q Consensus 473 p~~~~~~~~l~~~l~~~~~~~~~pG~svaVv~~g~~v~~~~~G~~~~~~~~~~t~~T~f~i~SiTK~~ta~~v~~lv~~G 552 (977)
|...++.+.+++.+++.++++.+||++|+|+++|++++ .+||+++...+.|++++|+|+|||+||+|||+++++|+|+|
T Consensus 26 ~~~~~~~~~id~~~~~~~~~~~~pG~~v~V~~~g~i~~-~~~G~~~~~~~~~~t~dT~f~iaSiTK~fta~ai~~Lve~G 104 (378)
T PRK10662 26 ADPLLASDIVDRYAEHIFYGSGATGMALVVIDGNQRVF-RSYGETRPGNNVRPQLDSLIRIASITKLMTSEVLVKLADDG 104 (378)
T ss_pred CCHHHHHHHHHHHHHHHHhcCCCCeEEEEEEECCEEEE-EeeeeccCCCCCCCCCCCeEEeeeecHHHHHHHHHHHHHCC
Confidence 44567888999999999999999999999999999888 68999999999999999999999999999999999999999
Q ss_pred CcCcCCchhhhcccccc---CCCCCCcHHHHhcCcCCCCCCcCCCCCCCCcC-CCCHHHHHHHHHccCCCCCCCCceecc
Q 002031 553 KLKLEENIANIWPEFKS---NGKDLIKVHHVLNHTSGLHNVSVDLSSENPLL-ICDWDECLNRIALSAPETEPGQEQLYH 628 (977)
Q Consensus 553 ~l~ld~~v~~ylP~~~~---~~~~~iTir~LLsHtSGl~~~~~~~~~~~~~~-~~~~~~~~~~l~~~~~~~~pG~~~~Ys 628 (977)
+|+||+||.+|+|++.. ...+.|||||||+||||++.+........+.. ..+.++.++.+...++.++||+.|.||
T Consensus 105 ~l~lddpv~~ylP~~~~~~~~~~~~ITir~LLsHtSGl~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~PGt~~~Ys 184 (378)
T PRK10662 105 TVKLTDPLSKYAPPGARVPTYNGQPITLLNLATHTSALPREQPGGAAHRPVFVWPTREQRWKWLSTAKLKAAPGTQAAYS 184 (378)
T ss_pred CCCCCCcHHHhCcccccCCCCCCCCccHHHHhhCcCCCCCCCCCccccCCcccCCCHHHHHHHHhcCCCcCCCCCceeec
Confidence 99999999999998532 22268999999999999997643211111111 125677888888889999999999999
Q ss_pred cCcHHHHHHHHHHHHhCCCHHHHHHHHcccccCCCCccCCCCCCCcccCcceecccCCccccccCCCCCCCCCCCCCCCc
Q 002031 629 YLSFGWLCGGIIERASGKKFQEILEEGIIQPLSIDGELYIGIPPGVESRLASLTIDTDDLNKVSGINNRPDLRLPSSFQP 708 (977)
Q Consensus 629 n~~~~~llg~iiE~vtG~~~~~~l~~~if~PLGm~~t~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~p~~~~p~~~~~ 708 (977)
|.+|. |||.|||++||++|++|++++||+||||++|.|... +....+.+.+|. . .. . .
T Consensus 185 n~~~~-lLg~iie~vtg~~~~~~l~~~I~~PLGM~~T~~~~~-~~~~~~~a~g~~--~-~~--~------~--------- 242 (378)
T PRK10662 185 NLAFD-LLADALAKAAGKPYTQLLREKITRPLGMKDTTFTPS-PDQCARLMVGEK--G-AS--P------C--------- 242 (378)
T ss_pred chhHH-HHHHHHHHHhCCCHHHHHHHhCccccCCCCCcCCCC-hhhhhhcccccC--C-CC--C------C---------
Confidence 99999 999999999999999999999999999999976432 223334444430 0 00 0 0
Q ss_pred chhhhhhhcccccccchhccccccCccceecCHHHHHHHHHHHHcCCCCCCC
Q 002031 709 DKISQLAAITPAVFNMLNIRRAIIPAANGHCSARALARYYAALADGGVVPPP 760 (977)
Q Consensus 709 ~~~~~~~~~~~~~~~~~~~~~~~~~agG~~sTa~Dlar~~~~ll~~g~~~~~ 760 (977)
. . .....++||++||++||+||+++++++|.+...
T Consensus 243 -------------~-~---~~~~~~aGGl~sT~~Dmak~~~~ll~~g~~~~~ 277 (378)
T PRK10662 243 -------------N-N---TLAAIGSGGVYSTPGDMMRWMQQFLSSDNYQRS 277 (378)
T ss_pred -------------c-c---ccccCCCCccccCHHHHHHHHHHHhCCCCCCcc
Confidence 0 0 012348899999999999999999998876543
|
|
| >PRK03642 putative periplasmic esterase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.4e-45 Score=422.18 Aligned_cols=333 Identities=21% Similarity=0.328 Sum_probs=238.3
Q ss_pred chHHHHHHHHHHHhccCCCccceEEEEEecCeeEEEeeccccCCC-------CCCCCCCCCcceeecchHHHHH-HHHHH
Q 002031 476 SDVEAKLRDFLVELGNDGKILGIQVCAYKDGEVIIDTSAGMLGRY-------DPRPVQPDSLFPVFSVTKGITA-GMLHW 547 (977)
Q Consensus 476 ~~~~~~l~~~l~~~~~~~~~pG~svaVv~~g~~v~~~~~G~~~~~-------~~~~~t~~T~f~i~SiTK~~ta-~~v~~ 547 (977)
....+++++.+++.++. .+||++++|+++|+++++++||+++.. .+.|+++||+|+|||+||+||+ +++++
T Consensus 37 ~~~~~~ld~~i~~~~~~-~~pG~sv~V~~~g~iv~~~~~G~~~~~~g~~~~~~~~~~t~dT~f~iaSiTK~ftt~~ai~~ 115 (432)
T PRK03642 37 SEKLNQMDRWISQQIDA-GYPGVNLLIIKDNQIVYRKAWGYAKKYDGSTLLAHPVKATTNTMYDLASNTKMYATNFALQK 115 (432)
T ss_pred HHHHHHHHHHHHHHHhc-CCCeEEEEEEECCEEEEEeeeeeccccccccccccCCCCCCCCEEechhhhHHHHHHHHHHH
Confidence 34467888888888875 599999999999999999999998843 4578999999999999999974 78899
Q ss_pred HHHCCCcCcCCchhhhccccccC------CCCCCcHHHHhcCcCCCCCCcCCCCCC--CCcCCCCHHHHHHHHHccCCCC
Q 002031 548 LVDNGKLKLEENIANIWPEFKSN------GKDLIKVHHVLNHTSGLHNVSVDLSSE--NPLLICDWDECLNRIALSAPET 619 (977)
Q Consensus 548 lv~~G~l~ld~~v~~ylP~~~~~------~~~~iTir~LLsHtSGl~~~~~~~~~~--~~~~~~~~~~~~~~l~~~~~~~ 619 (977)
|||+|+|+|||||.+|||+|... +++.|||||||+||||++.+....... ......+.+++++.+...++.+
T Consensus 116 Lve~G~l~ldd~v~~ylP~~~~~~~~~~~~~~~ITir~LLtHtSGl~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~ 195 (432)
T PRK03642 116 LVSEGKLDVNDLISKYIPGFKDSPGDKIKGKNTLRIIDLLHHSAGFPADPQYPNKAVAGALYSQDKSTTLEMIKKTPLEY 195 (432)
T ss_pred HHHCCCCCCcCcHHHhcccccccccccccCCCCCcHHHHhhCccCCCCCcccccccccccccccCHHHHHHHHhhCCCcC
Confidence 99999999999999999999753 246899999999999999753221111 1111235677888888899999
Q ss_pred CCCCceecccCcHHHHHHHHHHHHhCCCHHHHHHHHcccccCCCCccCCCCCCC-cccCcceecccCC-ccccccCCCCC
Q 002031 620 EPGQEQLYHYLSFGWLCGGIIERASGKKFQEILEEGIIQPLSIDGELYIGIPPG-VESRLASLTIDTD-DLNKVSGINNR 697 (977)
Q Consensus 620 ~pG~~~~Ysn~~~~~llg~iiE~vtG~~~~~~l~~~if~PLGm~~t~~~~~~~~-~~~~~a~~~~~~~-~~~~~~~~~~~ 697 (977)
+||+.|.|||.+|. |||.|||+++|++|++|++++||+||||++|+|...... ...+.+....... ....+ ..
T Consensus 196 ~PG~~~~Ysn~~~~-lLg~iie~vtG~~~~~~~~e~If~PLgM~~t~~~~~~~~~~~~~~a~~~~~g~~~~~~~----~~ 270 (432)
T PRK03642 196 QPGSKHIYSDVDYM-LLGFIVESITGQPLDRYVEESIYRPLGLTHTVFNPLQKGFKPQQIAATELNGNTRDGVI----HF 270 (432)
T ss_pred CCCCceEecchHHH-HHHHHHHHHhCCCHHHHHHHhhhcccCCCcCcccCccccccHhhcCcccccCccccccc----cc
Confidence 99999999999998 999999999999999999999999999999976422110 1111111110000 00000 00
Q ss_pred CCCCCCCCCCcchhhhhhhcccccccchhc--cccccCccceecCHHHHHHHHHHHHcCCCCCCCCCCCCCCCCCCCCCC
Q 002031 698 PDLRLPSSFQPDKISQLAAITPAVFNMLNI--RRAIIPAANGHCSARALARYYAALADGGVVPPPHSRLSKPPLGSHPHI 775 (977)
Q Consensus 698 p~~~~p~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~agG~~sTa~Dlar~~~~ll~~g~~~~~~~~~~~~~~~~~~~~ 775 (977)
|..+.... .+ ...+...+ .+...++||+++|++||+||+++++++|.+++.+
T Consensus 271 p~~~~~~~---------~~---~~~d~~~~~~~g~~~g~gGl~sTa~Dlakf~~~lL~~G~~~g~~-------------- 324 (432)
T PRK03642 271 PNIRTNTL---------WG---QVHDEKAFYSMGGVSGHAGLFSNTGDMAVLMQVMLNGGGYGNVQ-------------- 324 (432)
T ss_pred cccccCce---------ee---eecCcchhhhcCCcccccccccCHHHHHHHHHHHHhcCCcCCcc--------------
Confidence 00000000 00 00000111 1234578899999999999999999999988764
Q ss_pred CCCCCccccccccchhHHHHHHHhhccCCCCCCcccccCCCCCccccccCcchhhhhhhcccCCCCCCCccCCCCCCCCC
Q 002031 776 PKFPSHETSKKQKGTKKELLAALKNKTNNSEHGHKYTKDLEGGSHIRTASGDTYARLINIETSSSNTSTTDSISNTDEPQ 855 (977)
Q Consensus 776 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 855 (977)
=++++++++|.. + .
T Consensus 325 -------------lls~~~v~~~~~----------------------------------~-----------~-------- 338 (432)
T PRK03642 325 -------------LFDAETVKMFTT----------------------------------S-----------S-------- 338 (432)
T ss_pred -------------ccCHHHHHHHhc----------------------------------C-----------C--------
Confidence 123345554410 0 0
Q ss_pred CcccccccCCCcccccccCCCCCCCCCCCCCccccceeecCCC--------CCCccccccCCccCcceeeecCCCeEEEE
Q 002031 856 SSNVRKIFNNPRIHDAFLGVGDYGDLALPNGRFGLGFKRYNTR--------DGSYIGFGHSGMGGSTGFCDVNNRFAIAV 927 (977)
Q Consensus 856 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~yGlG~~~~~~~--------~~~~~~~gH~G~~G~~~~~~P~~~~~ivv 927 (977)
..+..||+||++.... ..+...|||+|.+|+.+|++|+.+++||+
T Consensus 339 ---------------------------~~~~~yGlGw~~~~~~~~~~~~g~~~~~~~~gh~G~~G~~~~vdPe~~l~ivi 391 (432)
T PRK03642 339 ---------------------------KEDATFGLGWRVNGNASMTPTFGTLASPQTYGHTGWTGTVTVIDPVNHMAIVM 391 (432)
T ss_pred ---------------------------CCCCccccccCcCCCCccccccccCCCCcccccCCccceEEEEecCCCEEEEE
Confidence 0123799999875321 12345799999999999999999999999
Q ss_pred EeccCC
Q 002031 928 TLNKMS 933 (977)
Q Consensus 928 l~N~~~ 933 (977)
++|...
T Consensus 392 ltN~~~ 397 (432)
T PRK03642 392 LSNKPH 397 (432)
T ss_pred ecCCcC
Confidence 999964
|
|
| >KOG1236 consensus Predicted unusual protein kinase [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.7e-45 Score=392.99 Aligned_cols=373 Identities=20% Similarity=0.293 Sum_probs=310.6
Q ss_pred HHHHHHHHHhcChHHHHHHHHHhcCCCCCCHHHHHHHHHHHhCCCCCCHHHHHHHHHHHhCC-ChhhcccccCccccccc
Q 002031 51 AKRVLNLIIKLEGLWVKLGQYLSTRADVLPEPYISLLKQLQDSLPPRPVQEVSQTIEREFGE-SMGGMFMDFVETPLATA 129 (977)
Q Consensus 51 a~~l~~~l~~lgg~~iK~GQ~ls~r~dllp~~~~~~L~~Lqd~~p~~~~~~v~~~l~~elg~-~~~~~f~~~d~~piasa 129 (977)
-+-|+.+++..||+|||+|||.|||.|+|++.+|..|++|+.+++|++|...++.+.+++|. .++++|.+|++.|||+|
T Consensus 121 ~~~L~kaLE~aGPtFIKLGQWAsTR~DlFs~afC~qLSKLHs~vt~Hs~a~T~k~l~qa~~~~~~~eiF~efn~~PIGsG 200 (565)
T KOG1236|consen 121 LRLLLKALETAGPTFIKLGQWASTRRDLFSKAFCAQLSKLHSNVTPHSFAFTKKKLRQAFGVKKIEEIFSEFNREPIGSG 200 (565)
T ss_pred HHHHHHHHHhcCCceEEecccccccccccCHHHHHHHHHHhccCCCCchHHHHHHHHHHHCcCcHHHHHHhcCCcccccc
Confidence 35789999999999999999999999999999999999999999999999999999999997 99999999999999999
Q ss_pred cccEEEEEEec-------C---------CCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhC--CCCCCchhHHHHhhh
Q 002031 130 SIAQVHRATLV-------D---------GRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAE--PQYDFNPIIDEWCKE 191 (977)
Q Consensus 130 SigqV~~A~l~-------~---------G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~--~~~~~~~~~~e~~~~ 191 (977)
||||||+|+++ + .+.|||||.||++++++..|+.+|+..++.+.+.+ ..+++...++.|.-.
T Consensus 201 ~IAQVY~atl~~a~lekd~~~~~~~~~~tq~~AiKv~Hp~V~~~ir~Dl~Il~f~Akl~~~vP~l~wL~l~~~vkqF~v~ 280 (565)
T KOG1236|consen 201 CIAQVYRATLKTAYLEKDSGKEYVQKLGTQSCAIKVLHPNVEKQIRLDLGILGFGAKLINNVPDLSWLSLPLEVKQFSVG 280 (565)
T ss_pred hhhhhhhhhhhHHHhhcccchhhhcCCccceeeeeccCccHHHHHHHHHHHHhhhhhhhhhcCccccccCcchHHHHHHH
Confidence 99999999863 1 36799999999999999999999999888877653 335778889999999
Q ss_pred cccccCcHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeee--cCCceEEeeccCCCCCCChHHHHhcCC--CH
Q 002031 192 APKELDFNSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ--SSETVLILEFMDGIRLNDCESLEAFGV--NK 267 (977)
Q Consensus 192 l~~Eld~~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~--~~~~vLVmE~i~G~~L~~~~~~~~~~~--~~ 267 (977)
+..++|.++||.|+.+|..+|. +...|.+|.++. .++.||+-+|.+|.++........ +. -.
T Consensus 281 ln~QvdL~~EA~hL~rF~~NF~-------------~s~~V~fP~P~~~~~~~~vl~E~~~~Gl~v~~~v~~~~-~pe~l~ 346 (565)
T KOG1236|consen 281 LNAQVDLRQEALHLPRFTNNFS-------------GSKKVLFPKPIAPLHTDLVLVETYERGLSVLRFVKWKS-QPEALV 346 (565)
T ss_pred HHhhcchhhhhhhhHHHHHhcc-------------cceeecCCcccccccccceeeeeccccccHHhhhhccc-ChHHHH
Confidence 9999999999999999999987 345688899886 899999999999999987754222 22 14
Q ss_pred HHHHHHHHHHHHHHHHhcCccccCCCCCCeEEccCCC-----------------------------------------Cc
Q 002031 268 QKVVEEITRAYAHQIYVDGFFNGDPHPGNFLVSKDPP-----------------------------------------HR 306 (977)
Q Consensus 268 ~~l~~~l~~~~l~~i~~~G~~H~D~hPgNIlv~~~~~-----------------------------------------g~ 306 (977)
++++...++++++|++.++|+|+|+|||||++...++ -+
T Consensus 347 kkva~lg~~AllkMl~vDNFvHaDlHPGNVlirf~~t~~~~~~~~~~e~~~~i~~~L~~~~~e~~d~~~~~~~~~~~~P~ 426 (565)
T KOG1236|consen 347 KKVAKLGVNALLKMLIVDNFVHADLHPGNVLIRFNKTEDNLRGVHKAEKASAIKRGLEWFRSEVRDARFTDSPDLEYEPT 426 (565)
T ss_pred HHHHHHHHHHHHHHHHhhcceecccCCCcEEEEecCCCccccccccchhhhHHhhhhhhhhhhhhhhhhhccccccCCCe
Confidence 5678888899999999999999999999999975433 46
Q ss_pred eEEEecccccccCHHHHHHHHHHHHHHHcCCHHHHHHHHHHcCcc-cCCCcHHHHHHHHHHHHhccCChhhhHHHHHhHH
Q 002031 307 PILLDFGLTKKLSSSMKQALAKMFFAAAEGDHVALLSAFAEMGLR-LRLDVPEQAMEVSTLFFRTSAPANEAFETVKNLS 385 (977)
Q Consensus 307 i~LiDFG~~~~l~~~~r~~~~~l~~a~~~~d~~~~~~~~~~~g~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 385 (977)
++++|-|++..++++.+.++..+|.|++..|.-.+.+.+.+.... ...|.+.++..+.+++..... . ..++.+
T Consensus 427 lvflDtGiv~kLs~qn~~N~l~lF~av~~~~Gy~ag~lml~~Sr~q~~~d~e~F~~kvEklv~~~~s-t----~sl~tl- 500 (565)
T KOG1236|consen 427 LVFLDTGIVTKLSHQNQMNLLSLFRAVARFDGYDAGELMLERSRQQQCIDPERFARKVEKLVLKARS-T----KSLRTL- 500 (565)
T ss_pred EEEecchhhhccChhhHHHHHHHHHHHHHhcchhHHHHHHhhcccccCCCHHHHHHHHHHHHHHhhh-h----cccCcC-
Confidence 899999999999999999999999999999988888888887654 345666677777776554320 0 011111
Q ss_pred HHHHhhHHHHHHHHHHhHHHHhhcCCCCCCCchHHHHHHHHHHHHHhhhccCccchhhcccchhHHHH
Q 002031 386 EQRAKNLKVIQEKMKLNQKEVKRFNPVDAFPGDIVIFSRVLNLLRGLSSTMNVRIVYLDIMRPFAEYV 453 (977)
Q Consensus 386 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~~~R~~~~leg~~~~L~p~~~~~~~~~~y~~~~ 453 (977)
.+...++|++.+.. .|+ +++..++.-++-++.+|||.+++|||+.|+.....+|+...
T Consensus 501 ----~i~~ll~em~tmvr----eH~--V~ids~f~tvvlsilvlEG~gRqLdP~lDl~~~~~~~l~~~ 558 (565)
T KOG1236|consen 501 ----NIGDLLSEMFTMVR----EHH--VRIDSNFTTVVLSILVLEGFGRQLDPDLDLFQLRTFLLNVA 558 (565)
T ss_pred ----cHHHHHHHHHHHHH----Hhh--eeeccchHHHHHHHHHHhhhccccCCCcchhhhHHHHHHHH
Confidence 13344556555533 333 68999999999999999999999999999998544444443
|
|
| >PRK13128 D-aminopeptidase; Reviewed | Back alignment and domain information |
|---|
Probab=100.00 E-value=5e-44 Score=418.84 Aligned_cols=237 Identities=19% Similarity=0.207 Sum_probs=187.6
Q ss_pred HHHHHHHHHHhccCCCccceEEEEEecCeeEEEeeccccCCCCCCCCCCCCcceeecchHHHHHHHHHHHHHCCCcCcCC
Q 002031 479 EAKLRDFLVELGNDGKILGIQVCAYKDGEVIIDTSAGMLGRYDPRPVQPDSLFPVFSVTKGITAGMLHWLVDNGKLKLEE 558 (977)
Q Consensus 479 ~~~l~~~l~~~~~~~~~pG~svaVv~~g~~v~~~~~G~~~~~~~~~~t~~T~f~i~SiTK~~ta~~v~~lv~~G~l~ld~ 558 (977)
.+.++++++++++++.+||++++|+++|+++++++||+++...+.|++++|+|+|||+||+|||+++++|+++|+ +||+
T Consensus 6 ~~~l~~~v~~l~~~~~~Pg~avaVv~~G~iv~~~~~G~ad~~~~~p~t~dT~f~IaSiTK~fTa~~il~Lveeg~-~LDd 84 (518)
T PRK13128 6 LPTLEAFVHAIPQNYKGPGGAVAVVKDGEVVLRHAWGFADLARRKAMTPETRMPICSVSKQFTCAVLLDCIGEPE-MLDA 84 (518)
T ss_pred HHHHHHHHHHHHHhcCCCcEEEEEEECCEEEEEEeEEeeccccCCCCCCCCeEechhhHHHHHHHHHHHHHhcCC-CCCC
Confidence 467888888888889999999999999999999999999999999999999999999999999999999999985 9999
Q ss_pred chhhhccccccCCCCCCcHHHHhcCcCCCCCCcCCCC--CCCCcCCCCHHHHHHHHHcc-CCCCCCCCceecccCcHHHH
Q 002031 559 NIANIWPEFKSNGKDLIKVHHVLNHTSGLHNVSVDLS--SENPLLICDWDECLNRIALS-APETEPGQEQLYHYLSFGWL 635 (977)
Q Consensus 559 ~v~~ylP~~~~~~~~~iTir~LLsHtSGl~~~~~~~~--~~~~~~~~~~~~~~~~l~~~-~~~~~pG~~~~Ysn~~~~~l 635 (977)
||.+|||+|.. .+|||+|||+|||||+++..... ..++......++..+.+... ++.++||+.|.|||.||. |
T Consensus 85 pv~~yLPe~~~---~~iTvr~LLtHTSGl~d~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~PGt~~~YSN~gy~-L 160 (518)
T PRK13128 85 ALAAYLDQFED---PRPAVRDLCNNQSGLRDYWALTVLCGAAPEGIFLPDQAQNLLRRLKTTHFAPGTHYSYCNGNFR-I 160 (518)
T ss_pred cHHHhcCCCCC---CCChHHHHhhCCCCCCccchhhhhcccccccCCCHHHHHHHHHhhccccCCCCCeeEEeCHHHH-H
Confidence 99999999975 35999999999999997532211 11222234556666666553 568999999999999999 9
Q ss_pred HHHHHHHHhCCCHHHHHHHHcccccCCCCccCCCCCCCcccCcceecccCCccccccCCCCCCCCCCCCCCCcchhhhhh
Q 002031 636 CGGIIERASGKKFQEILEEGIIQPLSIDGELYIGIPPGVESRLASLTIDTDDLNKVSGINNRPDLRLPSSFQPDKISQLA 715 (977)
Q Consensus 636 lg~iiE~vtG~~~~~~l~~~if~PLGm~~t~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~p~~~~p~~~~~~~~~~~~ 715 (977)
||.|||+++|++|++|++++||+||||++|++.. .....+.+.+|.........+
T Consensus 161 Lg~iIE~vtG~~~~~~l~~~If~PLGM~~T~~~~--~~~~~~~a~Gy~~~~~~~~~p----------------------- 215 (518)
T PRK13128 161 LADLIEQHTGRSLADLLAERIFAPAGMKTAELIP--DTALFDECTGYEGDTVRGFLP----------------------- 215 (518)
T ss_pred HHHHHHHHhCCCHHHHHHHhhhcccCCCccccCc--cccccccccccccCCCCCccc-----------------------
Confidence 9999999999999999999999999999997642 222233344443211000000
Q ss_pred hcccccccchhccccccCccceecCHHHHHHHHHHHHcC
Q 002031 716 AITPAVFNMLNIRRAIIPAANGHCSARALARYYAALADG 754 (977)
Q Consensus 716 ~~~~~~~~~~~~~~~~~~agG~~sTa~Dlar~~~~ll~~ 754 (977)
..+. ....++||++||+.||+||+++++++
T Consensus 216 -----~~~~----~~~~g~gGl~STa~Dma~~~~~l~~~ 245 (518)
T PRK13128 216 -----AINR----IHWLGDAGICASLDDMIAWEQFIDRT 245 (518)
T ss_pred -----Cccc----ccccCCcceEcCHHHHHHHHHHHHcc
Confidence 0011 11347789999999999999998764
|
|
| >PF00144 Beta-lactamase: Beta-lactamase; InterPro: IPR001466 This entry represents the serine beta-lactamase-like superfamily | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.9e-43 Score=395.99 Aligned_cols=244 Identities=28% Similarity=0.425 Sum_probs=195.8
Q ss_pred HHHHHHHhccCCCccceEEEEEecCeeEEEeeccccCCCCCCCCCCCCcceeecchHHHHHHHHHHHHHCCCcCcCCchh
Q 002031 482 LRDFLVELGNDGKILGIQVCAYKDGEVIIDTSAGMLGRYDPRPVQPDSLFPVFSVTKGITAGMLHWLVDNGKLKLEENIA 561 (977)
Q Consensus 482 l~~~l~~~~~~~~~pG~svaVv~~g~~v~~~~~G~~~~~~~~~~t~~T~f~i~SiTK~~ta~~v~~lv~~G~l~ld~~v~ 561 (977)
+++.+++.++++.+||++++|+++|+++++.++|+++...+.+++++|+|+++|+||+||++++++|+++|+|+||+||.
T Consensus 1 ~~~~i~~~~~~~~~~g~a~~v~~~g~~~~~~~~G~~~~~~~~~~~~~t~~~i~SvsK~~ta~~v~~l~~~G~l~ld~~v~ 80 (329)
T PF00144_consen 1 IDRIIEQFMERYGIPGAAVAVIHNGKIVYEQYYGYADKQTGKPMTPDTVFRIGSVSKSFTATAVMQLIDEGKLDLDDPVS 80 (329)
T ss_dssp HHHHHHHHHHHTTESEEEEEEEETTEEEEEEEEEEEETTTTEEESTTSBEEEGGGHHHHHHHHHHHHHHTTSSGTTSBGG
T ss_pred ChHHHHHHHHhCCCcEEEEEEEECCEEEEEEEEeecccccCCCCCccceeeccCCcceeehhhhhhhhccccccccCccc
Confidence 46788888889999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhccccccCCCCCCcHHHHhcCcCCCCCCcCCCCCCCCcCCCCHHHHHHHHHccCCCCCCCCceecccCcHHHHHHHHHH
Q 002031 562 NIWPEFKSNGKDLIKVHHVLNHTSGLHNVSVDLSSENPLLICDWDECLNRIALSAPETEPGQEQLYHYLSFGWLCGGIIE 641 (977)
Q Consensus 562 ~ylP~~~~~~~~~iTir~LLsHtSGl~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~pG~~~~Ysn~~~~~llg~iiE 641 (977)
+|||++.....++|||+|||+||||++++......... ....+++++.+...++.++||+.|.|||.+|. |||.|||
T Consensus 81 ~ylp~~~~~~~~~iTi~~LL~htSGl~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~pg~~~~Ysn~~~~-ll~~ile 157 (329)
T PF00144_consen 81 KYLPEFPDPGKEKITIRDLLTHTSGLPDYEASDELFGD--KPFWDELLQYLANLPLNFPPGTQFAYSNTNYQ-LLGEILE 157 (329)
T ss_dssp GTTTTGTTCGGTTEBHHHHHTTHSSHSSSSHTTTHTSH--HHHHHHHHHHHHHSCSSSSTTSEEE--HHHHH-HHHHHHH
T ss_pred ccccccccccccCcccceeceeecCCCccccccccccc--ccchhHHHhhhhcccccccccccccccCcchh-hhhHHHH
Confidence 99998777777789999999999999986332221110 01126899999999999999999999999999 9999999
Q ss_pred HHhCCCHHHHHHHHcccccCCCCccCCCCCCCcccCcceecccCCccccccCCCCCCCCCCCCCCCcchhhhhhhccccc
Q 002031 642 RASGKKFQEILEEGIIQPLSIDGELYIGIPPGVESRLASLTIDTDDLNKVSGINNRPDLRLPSSFQPDKISQLAAITPAV 721 (977)
Q Consensus 642 ~vtG~~~~~~l~~~if~PLGm~~t~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~p~~~~p~~~~~~~~~~~~~~~~~~ 721 (977)
+++|++|+++++++||+||||++|.|.. +.......+..+.......... .
T Consensus 158 ~~tg~~~~~~~~~~i~~plgm~~t~~~~-~~~~~~~~~~~~~~~~~~~~~~----------------------------~ 208 (329)
T PF00144_consen 158 RVTGKSFEELLQENIFQPLGMKHTGFGP-PDAWPPRDAIGYYGNGDQASSP----------------------------P 208 (329)
T ss_dssp HHHTSHHHHHHHHHTTTTTTSTTEESSB-GGGGGGGBEEEEEETTEEECEE----------------------------S
T ss_pred HhccchhHHHHHHHHHHHhhcccccccc-cccccccccccccccccccccc----------------------------c
Confidence 9999999999999999999999997643 3333333343332222111111 0
Q ss_pred ccchhccccccCccceecCHHHHHHHHHHHHcCCCCCCC
Q 002031 722 FNMLNIRRAIIPAANGHCSARALARYYAALADGGVVPPP 760 (977)
Q Consensus 722 ~~~~~~~~~~~~agG~~sTa~Dlar~~~~ll~~g~~~~~ 760 (977)
..... ...++||+++|++||+||++++++++.+...
T Consensus 209 ~~~~~---~~~~aggl~st~~Dlak~~~~~~~~~~~~~~ 244 (329)
T PF00144_consen 209 GYNPN---PYYGAGGLFSTARDLAKFGQLLLNGGLILSP 244 (329)
T ss_dssp CTTHH---HHTTTTTEEECHHHHHHHHHHHHHTGGSSCH
T ss_pred ccccc---cccccCccchhhHHHHHHHHHHhCCCccchh
Confidence 00011 1118999999999999999888888776655
|
It is a group of diverse group of sequences that includes D-alanyl-D-alanine carboxypeptidase B, aminopeptidase (DmpB), alkaline D-peptidase, animal D-Ala-D-Ala carboxypeptidase homologues and the class A and C beta-lactamases and eukaryotic beta-lactamase homologues which are variously described as: transesterases, non-ribosomal peptide synthetases and hypothetical proteins. Many are serine peptidases belonging to MEROPS peptidase families S11 (D-Ala-D-Ala carboxypeptidase A family) and S12 (D-Ala-D-Ala carboxypeptidase B family, clan SE). The beta-lactamases are classified as both S11 and S12 non-peptidase homologues; these either have been found experimentally to be without peptidase activity, or lack amino acid residues that are believed to be essential for the catalytic activity. Beta-lactamase catalyses the opening and hydrolysis of the beta-lactam ring of beta-lactam antibiotics such as penicillins and cephalosporins []. There are four groups, classed A, B, C and D according to sequence, substrate specificity, and kinetic behaviour: class A (penicillinase-type) is the most common []. The genes for class A beta-lactamases are widely distributed in bacteria, frequently located on transmissible plasmids in Gram-negative organisms, although an equivalent chromosomal gene has been found in a few species []. Class A, C and D beta-lactamases are serine-utilising hydrolases - class B enzymes utilise a catalytic zinc centre instead. The 3 classes of serine beta-lactamase are evolutionarily related and belong to a superfamily that also includes DD-peptidases and other penicillin-binding proteins []. All these proteins contain an S-x-x-K motif, the Ser being the active site residue. Although clearly related, however, the sequences of the 3 classes of serine beta-lactamases vary considerably outside the active site. ; PDB: 1CI8_A 1CI9_B 1PW8_A 1PW1_A 1CEF_A 3PTE_A 1MPL_A 1PWG_A 1CEG_A 1IKG_A .... |
| >COG1680 AmpC Beta-lactamase class C and other penicillin binding proteins [Defense mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.3e-37 Score=352.59 Aligned_cols=250 Identities=28% Similarity=0.417 Sum_probs=182.4
Q ss_pred HHHHHHHHhccCCCc--cceEEEEEecCeeEEEeeccccCCCCCCCCCCCCcceeecchHHHHHHHHHHHHHCCCcCcCC
Q 002031 481 KLRDFLVELGNDGKI--LGIQVCAYKDGEVIIDTSAGMLGRYDPRPVQPDSLFPVFSVTKGITAGMLHWLVDNGKLKLEE 558 (977)
Q Consensus 481 ~l~~~l~~~~~~~~~--pG~svaVv~~g~~v~~~~~G~~~~~~~~~~t~~T~f~i~SiTK~~ta~~v~~lv~~G~l~ld~ 558 (977)
.++..++..+++... +|++++|+++|++++.+.+|+++...+.+.+++|+|+|+|+||+|||+++++|||+|+|+|||
T Consensus 37 ~~~~~~~~~~~~~~~~~~g~a~av~~~g~~~~~~~~g~~~~~~~~~~~~~t~f~i~S~TK~~ta~~i~~LveeG~l~ldd 116 (390)
T COG1680 37 RLDRLADAIMEEYGAPGPGLALAVVLDGKTVVAKGYGVADEGYGGPVTPPTVFRIASVTKSFTATLLGKLVEEGKLDLDD 116 (390)
T ss_pred hhhhHHHHHHHhcccCCCceEEEEEECCEEEEEeccccccccccCCCCCCceeeehhhhHHHHHHHHHHHHHcCCCCCCc
Confidence 334444444443444 599999999999988899999999999999999999999999999999999999999999999
Q ss_pred chhhhcccc---ccCCCCCCcHHHHhcCcCCCCCCcCCCCCCCCcCCCCHHHHHHHHHccC--CCCCCCCceecccCcHH
Q 002031 559 NIANIWPEF---KSNGKDLIKVHHVLNHTSGLHNVSVDLSSENPLLICDWDECLNRIALSA--PETEPGQEQLYHYLSFG 633 (977)
Q Consensus 559 ~v~~ylP~~---~~~~~~~iTir~LLsHtSGl~~~~~~~~~~~~~~~~~~~~~~~~l~~~~--~~~~pG~~~~Ysn~~~~ 633 (977)
||++|||+. .... .+|||+|||+||||++...............+.+.+.+.+...+ ...+||+.+.|||.+|.
T Consensus 117 pV~~ylP~~~~~~~~~-~~iTi~~LL~htSGl~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~pG~~~~Ysn~~~~ 195 (390)
T COG1680 117 PVSKYLPEGKDPATGG-APITLRDLLTHTSGLPFPEDYAYAVPKRLVQDQEAALEYLASLPPELAPPPGTAFAYSNSNYG 195 (390)
T ss_pred hHHHhCCCccCCcCCc-cceeHHHhhhcccCCCCcccccccccchhhhhHHHHHHHHHhccccccCCCCcceeeecccHH
Confidence 999999962 2233 58999999999999997222111111112234455566777776 46778999999999999
Q ss_pred HHHHHHHHHHhCCCHHHHHHHHcccccCCCCccCCCCCCCcccCcceecccCCccccccCCCCCCCCCCCCCCCcchhhh
Q 002031 634 WLCGGIIERASGKKFQEILEEGIIQPLSIDGELYIGIPPGVESRLASLTIDTDDLNKVSGINNRPDLRLPSSFQPDKISQ 713 (977)
Q Consensus 634 ~llg~iiE~vtG~~~~~~l~~~if~PLGm~~t~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~p~~~~p~~~~~~~~~~ 713 (977)
+||.|||+++|++|+++++++||+||||++|.+.. ++....+.+..+....... .....|.
T Consensus 196 -lLg~ive~v~G~~~~~~~~~~i~~PLGm~~t~~~~-~~~~~~~~~~~~~~~~~~~---~~~~~~~-------------- 256 (390)
T COG1680 196 -LLGAILERVTGKPLEELLRERIFEPLGMTSTGFGP-PPAPQARLAAGLAPAVGGG---GEVDDPG-------------- 256 (390)
T ss_pred -HHHHHHHHhcCCCHHHHHHHHhhcccCCCcccccc-ChhhhcccccccccccccC---CccccCc--------------
Confidence 99999999999999999999999999999996643 3333322222211000000 0000000
Q ss_pred hhhcccccccchhccccccCccceecCHHHHHHHHHHHHcCCCCCCC
Q 002031 714 LAAITPAVFNMLNIRRAIIPAANGHCSARALARYYAALADGGVVPPP 760 (977)
Q Consensus 714 ~~~~~~~~~~~~~~~~~~~~agG~~sTa~Dlar~~~~ll~~g~~~~~ 760 (977)
...+.....+++|+.+|++||++|++++++++.+.+.
T Consensus 257 ----------~~~~~~~~~~~~gl~~t~~d~~~~~~~~l~~~~~~~~ 293 (390)
T COG1680 257 ----------TFGLGSALAGAGGLFSTARDMARFGQALLNGGVLLGR 293 (390)
T ss_pred ----------cccccccCCCCCceecccchHHHHHHHHhcCCCccch
Confidence 0001111346799999999999999999999866655
|
|
| >KOG1234 consensus ABC (ATP binding cassette) 1 protein [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-36 Score=312.66 Aligned_cols=350 Identities=22% Similarity=0.305 Sum_probs=287.2
Q ss_pred HhcCC-CCCCHHHHHHHHHHHhCCCCCCHHHHHHHHHHHhCCChhhcccccCccccccccccEEEEEEecCCCEEEEEEe
Q 002031 72 LSTRA-DVLPEPYISLLKQLQDSLPPRPVQEVSQTIEREFGESMGGMFMDFVETPLATASIAQVHRATLVDGRQVVVKVQ 150 (977)
Q Consensus 72 ls~r~-dllp~~~~~~L~~Lqd~~p~~~~~~v~~~l~~elg~~~~~~f~~~d~~piasaSigqV~~A~l~~G~~VAVKv~ 150 (977)
||.+. .++|+...+.|++.++++..||..++.+++..++|.+|.+.|++||+.|.+++||||||+|++++|..||||||
T Consensus 2 LSiQD~~ll~p~l~qi~erVrqsAd~MP~~Ql~~vm~~~lG~nW~~Kf~~fd~~P~AaASIGQVHrArl~~g~eVavKiQ 81 (363)
T KOG1234|consen 2 LSIQDGSLLPPTLGQILERVRQSADFMPPKQLEPVMWGELGGNWAQKFSSFDDGPFAAASIGQVHRARLADGPEVAVKIQ 81 (363)
T ss_pred cccccCCccCHHHHHHHHHhcCccccCChhhhhHHHhhhhchhHHHHHHhhccCccccccHHHHHHHHhcCCCeeeeecC
Confidence 34443 57899999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCcHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCC
Q 002031 151 HQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEAENTRIVSANLGCKNKHEDSNKKPAYEVD 230 (977)
Q Consensus 151 ~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (977)
+||+.+.+..|+..+.+++..-..++..+-++..++-.++++..|+||.+||....+|+..+. +.+.
T Consensus 82 YPGva~sI~SD~~nl~~lLn~s~llPkGLFLd~~i~~ArkEL~~ECDYqrEA~~~~kFr~LLs-------------~~p~ 148 (363)
T KOG1234|consen 82 YPGVARSIDSDANNLSRLLNFSGLLPKGLFLDVLIEVARKELKWECDYQREAASALKFRPLLS-------------DDPN 148 (363)
T ss_pred CCchhhhccCcHHHHHHHHhhcccccccccHHHHHHHHHHhcccccchHHHHHHHhhhHHHhc-------------CCCC
Confidence 999999999999999999887666666777888899999999999999999999999998775 5778
Q ss_pred eEeceeee--cCCceEEeeccCCCCCCChHHHHhcCCCHHHHHHHHHHHHHHHHHhcCccccCCCCCCeEEccCCCCceE
Q 002031 231 VLIPEVIQ--SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAYAHQIYVDGFFNGDPHPGNFLVSKDPPHRPI 308 (977)
Q Consensus 231 v~vP~v~~--~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~ 308 (977)
++||.|+. |+.++|+||++.|.+|.....+ .+..++.|...+++.+++.|++..|+..||+=+|++++.. +.+|.
T Consensus 149 f~VP~Vv~Elct~rvlt~el~~G~pid~~~~~--sQ~~rn~i~~~~l~lcLrEif~f~fMQTDPNWsNFly~~~-tk~i~ 225 (363)
T KOG1234|consen 149 FYVPRVVDELCTVRVLTLELGQGLPIDKTAKL--SQETRNYIGYKLLELCLREIFEFRFMQTDPNWSNFLYNGR-TKKIE 225 (363)
T ss_pred cchhHHHHhhccchhhhhhhhcCccchhhhcc--cHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCHHHhccCCC-cceEE
Confidence 99999996 9999999999999999876332 2234678999999999999999999999999999999865 57899
Q ss_pred EEecccccccCHHHHHHHHHHHHHHHcCCHHHHHHHHHHcCcccCCCcHHHHHH-HHHHHHhccCChhhhHHHHHhHHHH
Q 002031 309 LLDFGLTKKLSSSMKQALAKMFFAAAEGDHVALLSAFAEMGLRLRLDVPEQAME-VSTLFFRTSAPANEAFETVKNLSEQ 387 (977)
Q Consensus 309 LiDFG~~~~l~~~~r~~~~~l~~a~~~~d~~~~~~~~~~~g~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 387 (977)
|+|||.++.+++++...|++++.|+..+|.+.+.+.-+++|+...........+ +..++. -..|.... ..+.+.
T Consensus 226 LlDFGAsr~y~~~F~d~Y~~~~~aaa~~dr~~v~e~S~~lgfLtg~Es~~m~DAHv~sv~i-lgepfa~~----~pydF~ 300 (363)
T KOG1234|consen 226 LLDFGASREYGEKFIDKYIRLLKAAADRDREGVIEMSRELGFLTGYESKVMEDAHVESVMI-LGEPFASD----GPYDFG 300 (363)
T ss_pred EEeccccccccHHHHHHHHHHHHHHHhcchHHHHHHHHHhcccccchHHHHHHHhhhHhhh-ccccccCC----CCcCcC
Confidence 999999999999999999999999999999999999999999643221111111 112111 11111100 112222
Q ss_pred HHhhHHHHHHHHHHhHHHHhhcCCCCCCCchHHHHHHHHHHHHHhhhccCccchhhcccc
Q 002031 388 RAKNLKVIQEKMKLNQKEVKRFNPVDAFPGDIVIFSRVLNLLRGLSSTMNVRIVYLDIMR 447 (977)
Q Consensus 388 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~~~R~~~~leg~~~~L~p~~~~~~~~~ 447 (977)
.......++..+..+ .+++ +...|.|...+.|.+....=+|..|++.|...+...
T Consensus 301 ~q~~t~ri~~lipvm----L~hR-L~pPPeEtYsLHRklsG~fL~cakl~A~v~C~~lf~ 355 (363)
T KOG1234|consen 301 DQTVTDRIQNLIPVM----LRHR-LCPPPEETYSLHRKLSGAFLLCAKLGATVPCRDLFK 355 (363)
T ss_pred ccHHHHHHHhhhHHH----Hhcc-CCCCcHHHHHHHHHhhhHHHHHHHhcCCCcHHHHHH
Confidence 222334555555553 3334 246788899999999999999999999998776644
|
|
| >PF03109 ABC1: ABC1 family; InterPro: IPR004147 This entry includes ABC1 from yeast [] and AarF from Escherichia coli [] | Back alignment and domain information |
|---|
Probab=99.91 E-value=2.4e-25 Score=211.60 Aligned_cols=117 Identities=38% Similarity=0.574 Sum_probs=110.2
Q ss_pred HHhCCChhhcccccCccccccccccEEEEEEecCCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCC--CCCchhH
Q 002031 108 REFGESMGGMFMDFVETPLATASIAQVHRATLVDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQ--YDFNPII 185 (977)
Q Consensus 108 ~elg~~~~~~f~~~d~~piasaSigqV~~A~l~~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~--~~~~~~~ 185 (977)
++||.+++++|.+||++|+|||||||||+|++++|++||||||||++++.+..|+++++.++.++.+..+. +++..++
T Consensus 1 e~lG~~~~~~F~~fd~~PlasASiaQVh~a~l~~g~~VaVKV~rP~i~~~i~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~ 80 (119)
T PF03109_consen 1 EELGKPIDEIFDEFDPEPLASASIAQVHRARLKDGEEVAVKVQRPGIEEQIEADLRILRRLARLLERLPPFRRLDLEEIV 80 (119)
T ss_pred CCcCCCHHHHHHHCCcchhhheehhhheeeeecccchhhhhhcchHHHHHHHHHHHHHHHHHHHHHHcccccccCHHHHH
Confidence 47999999999999999999999999999999999999999999999999999999999999999987665 7899999
Q ss_pred HHHhhhcccccCcHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceee
Q 002031 186 DEWCKEAPKELDFNSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVI 237 (977)
Q Consensus 186 ~e~~~~l~~Eld~~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~ 237 (977)
+++.+.+.+|+||++|++|+++|+++|. +...++||+||
T Consensus 81 ~e~~~~l~~ElDf~~Ea~n~~~~~~~~~-------------~~~~v~vP~vy 119 (119)
T PF03109_consen 81 DEFRDSLLEELDFRREAANLERFRKNFA-------------DSPRVYVPKVY 119 (119)
T ss_pred HHHHHHHHHHhCHHHHHHHHHHHHHHhC-------------CCCCEecCCCC
Confidence 9999999999999999999999999987 34689999986
|
These proteins have a nuclear or mitochondrial subcellular location in eukaryotes. The exact molecular functions of these proteins is not clear, however yeast ABC1 suppresses a cytochrome b mRNA translation defect and is essential for the electron transfer in the bc 1 complex [] and E. coli AarF is required for ubiquinone production []. It has been suggested that members of the ABC1 family are novel chaperonins []. These proteins are unrelated to the ABC transporter proteins. |
| >cd05145 RIO1_like RIO kinase family; RIO1, RIO3 and similar proteins, catalytic domain | Back alignment and domain information |
|---|
Probab=99.80 E-value=3.2e-19 Score=185.17 Aligned_cols=182 Identities=18% Similarity=0.223 Sum_probs=119.1
Q ss_pred cccccccccEEEEEEecCCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCcHHHHH
Q 002031 124 TPLATASIAQVHRATLVDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEAE 203 (977)
Q Consensus 124 ~piasaSigqV~~A~l~~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea~ 203 (977)
.+||+||+|+||+|++.+|+.||||+.+++.... ..+.+.+.....+... ....+...+.. ..+..|.+
T Consensus 3 ~~ig~G~~~~Vy~a~~~~g~~vavKv~~~~~~~~-~~~~~~~~~~~~~~~~-~~~~~~~~~~~---------~~~~~E~~ 71 (190)
T cd05145 3 GCISTGKEANVYHARTGDGEELAVKIYKTSTLSF-KDRDKYIEGDPRFRSR-YSKSNPRKLVF---------AWAEKEFR 71 (190)
T ss_pred ceeecCCCcEEEEEEcCCCCEEEEEEEEcCcceE-eeHHHHhcCCcccccc-cccCCHHHHHH---------HHHHHHHH
Confidence 5899999999999998889999999999985421 1111111000000000 00001111111 12357888
Q ss_pred HHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeeecCCceEEeeccCCCCCCChHHHHhcCCCHHH---HHHHHHHHHHH
Q 002031 204 NTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQSSETVLILEFMDGIRLNDCESLEAFGVNKQK---VVEEITRAYAH 280 (977)
Q Consensus 204 n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~---l~~~l~~~~l~ 280 (977)
++.++.+ ..+.+|.++.+...+|||||++|..+... .+.....+... ++..++.. +.
T Consensus 72 ~l~~l~~------------------~~i~~p~~~~~~~~~lVmE~~~g~~~~~~-~l~~~~~~~~~~~~i~~~l~~~-l~ 131 (190)
T cd05145 72 NLKRLYE------------------AGVPVPEPILLKKNVLVMEFIGDDGSPAP-RLKDVPLEEEEAEELYEQVVEQ-MR 131 (190)
T ss_pred HHHHHHh------------------CCCCCceEEEecCCEEEEEEecCCCchhh-hhhhccCCHHHHHHHHHHHHHH-HH
Confidence 8888864 24677888776678999999999855432 12333444333 34444443 66
Q ss_pred HHHh-cCccccCCCCCCeEEccCCCCceEEEecccccccCHHHHHHHHHHHHHHHcCCHHHHHHHHH
Q 002031 281 QIYV-DGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSSSMKQALAKMFFAAAEGDHVALLSAFA 346 (977)
Q Consensus 281 ~i~~-~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~~~r~~~~~l~~a~~~~d~~~~~~~~~ 346 (977)
++|. .|++|+||||+|||++ + ++++|+|||+++.++.. ...++..+|++.+...|.
T Consensus 132 ~lH~~~givHrDlkP~NIll~-~--~~~~liDFG~a~~~~~~-------~~~~~~~~~~~~~~~~~~ 188 (190)
T cd05145 132 RLYQEAGLVHGDLSEYNILYH-D--GKPYIIDVSQAVELDHP-------NALEFLRRDIRNINRFFR 188 (190)
T ss_pred HHHHhCCEecCCCChhhEEEE-C--CCEEEEEcccceecCCC-------CHHHHHHHHHHHHHHHhh
Confidence 7787 9999999999999997 4 78999999999998764 445567788888877764
|
The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. In addition, RIO3 is present in multicellular eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle pro |
| >cd05147 RIO1_euk RIO kinase family; eukaryotic RIO1, catalytic domain | Back alignment and domain information |
|---|
Probab=99.78 E-value=1.1e-18 Score=180.94 Aligned_cols=182 Identities=16% Similarity=0.185 Sum_probs=115.9
Q ss_pred cccccccccEEEEEEecCCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCcHHHHH
Q 002031 124 TPLATASIAQVHRATLVDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEAE 203 (977)
Q Consensus 124 ~piasaSigqV~~A~l~~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea~ 203 (977)
..||+||+|+||+|++++|++||||+++++.......| ..+....++.. .....+...++.++. .+|.+
T Consensus 3 ~~ig~G~~~~Vy~a~~~~g~~vAvKv~~~~~~~~~~~~-~~~~~~~~~~~-~~~~~~~~~~~~~~~---------~~E~~ 71 (190)
T cd05147 3 GCISTGKEANVYHATTANGEERAIKIYKTSILVFKDRD-RYVSGEFRFRH-GYCKSNPRKMVRTWA---------EKEMR 71 (190)
T ss_pred CccccccceEEEEEECCCCCEEEEEEEEecccccccHH-HhhcCCchhhc-cccCCCHHHHHHHHH---------HHHHH
Confidence 46999999999999988999999999998754322111 11000000000 001112222222222 46888
Q ss_pred HHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeeecCCceEEeeccCCCCCCChHHHHhcCCCHHHHHHHHHHH--HHHH
Q 002031 204 NTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQSSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRA--YAHQ 281 (977)
Q Consensus 204 n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~--~l~~ 281 (977)
++.++.+. .+.+|.++.+...+|||||++|..+.... +....++...+...+.++ .+.+
T Consensus 72 ~l~~l~~~------------------~v~~p~~~~~~~~~iVmE~i~g~~l~~~~-~~~~~~~~~~~~~i~~qi~~~L~~ 132 (190)
T cd05147 72 NLKRLVTA------------------GIPCPEPILLKSHVLVMEFIGDDGWAAPR-LKDAPLSESKARELYLQVIQIMRI 132 (190)
T ss_pred HHHHHHHC------------------CCCCCcEEEecCCEEEEEEeCCCCCcchh-hhcCCCCHHHHHHHHHHHHHHHHH
Confidence 88888641 34456666666779999999997665431 233456666666666553 3777
Q ss_pred H-HhcCccccCCCCCCeEEccCCCCceEEEecccccccCHHHHHHHHHHHHHHHcCCHHHHHHHH
Q 002031 282 I-YVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSSSMKQALAKMFFAAAEGDHVALLSAF 345 (977)
Q Consensus 282 i-~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~~~r~~~~~l~~a~~~~d~~~~~~~~ 345 (977)
+ |..|++||||||+|||++ + ++++|||||++.......- ..++.+|.+.+.+.|
T Consensus 133 l~H~~giiHrDlkP~NIli~-~--~~v~LiDFG~a~~~~~~~~-------~~~~~~d~~~~~~~f 187 (190)
T cd05147 133 LYQDCRLVHADLSEYNLLYH-D--GKLYIIDVSQSVEHDHPHA-------LEFLRMDCVNVNDFF 187 (190)
T ss_pred HHHhCCcccCCCCHHHEEEE-C--CcEEEEEccccccCCCcCH-------HHHHHHHHHHHHHHh
Confidence 7 689999999999999997 2 6899999999986644322 223455666555554
|
The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. This subfamily is composed of RIO1 proteins from eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle progression and c |
| >smart00090 RIO RIO-like kinase | Back alignment and domain information |
|---|
Probab=99.69 E-value=2.3e-16 Score=169.18 Aligned_cols=183 Identities=21% Similarity=0.278 Sum_probs=124.8
Q ss_pred cccccccccEEEEEE--ecCCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCC--CchhHHHHhhhcccccCcH
Q 002031 124 TPLATASIAQVHRAT--LVDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYD--FNPIIDEWCKEAPKELDFN 199 (977)
Q Consensus 124 ~piasaSigqV~~A~--l~~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~--~~~~~~e~~~~l~~Eld~~ 199 (977)
++||+|++|+||+|+ .++|++||||+.+++.......+. . .. ..+.+. -.....+ .+..+.
T Consensus 34 ~~Lg~G~~g~Vy~a~~~~~~g~~vaiK~~~~~~~~~~~~~~-----~---~~-~~~~~~~~~~~~~~~------~~~~~~ 98 (237)
T smart00090 34 GCISTGKEANVYHALDFDGSGKERAVKIYRTGTLEFKRRDR-----Y---VD-GDFRFKYRKINPRKL------VRLWAE 98 (237)
T ss_pred CeeccCcceeEEEEEecCCCCcEEEEEEEEcCcceecchhh-----h---cc-cchhhccCCCCHHHH------HHHHHH
Confidence 589999999999998 578999999999876532111000 0 00 000000 0000000 012356
Q ss_pred HHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeeecCCceEEeeccCCCCCCChHHHHhcCCCHH---HHHHHHHH
Q 002031 200 SEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQSSETVLILEFMDGIRLNDCESLEAFGVNKQ---KVVEEITR 276 (977)
Q Consensus 200 ~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~---~l~~~l~~ 276 (977)
.|++++.++.+. .+.+|+++..+..+|||||++|.++.... +.....+.. .++..++.
T Consensus 99 ~E~~~L~~L~~~------------------~i~~p~~~~~~~~~lV~E~~~g~~L~~~~-~~~~~~~~~~~~~i~~qi~~ 159 (237)
T smart00090 99 KEFRNLQRLYEA------------------GVPVPKPIAWRRNVLVMEFIGGDGLPAPR-LKDVEPEEEEEFELYDDILE 159 (237)
T ss_pred HHHHHHHHHHhc------------------CCCCCeeeEecCceEEEEEecCCcccccc-cccCCcchHHHHHHHHHHHH
Confidence 788898888641 36678888766789999999998876542 112222322 33443333
Q ss_pred HHHHHHHhcC-ccccCCCCCCeEEccCCCCceEEEecccccccCHHHHHHHHHHHHHHHcCCHHHHHHHHHHcCcc
Q 002031 277 AYAHQIYVDG-FFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSSSMKQALAKMFFAAAEGDHVALLSAFAEMGLR 351 (977)
Q Consensus 277 ~~l~~i~~~G-~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~~~r~~~~~l~~a~~~~d~~~~~~~~~~~g~~ 351 (977)
.+.++|..| ++|+|+||+||+++ + ++++|+|||++.......+ .+++.+|.+.+...+.++|+.
T Consensus 160 -~l~~LH~~g~iiH~Dikp~NIli~-~--~~i~LiDFg~a~~~~~~~~-------~~~~~~d~~~~~~~~~~~~~~ 224 (237)
T smart00090 160 -EMRKLYKEGELVHGDLSEYNILVH-D--GKVVIIDVSQSVELDHPMA-------LEFLERDIRNIIRFFRRKGVD 224 (237)
T ss_pred -HHHHHHhcCCEEeCCCChhhEEEE-C--CCEEEEEChhhhccCCcch-------HHHHHHHHHHHHHHHHHcCCC
Confidence 378899999 99999999999998 4 7899999999998877553 356899999999999999985
|
|
| >KOG0595 consensus Serine/threonine-protein kinase involved in autophagy [Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.66 E-value=1.8e-16 Score=172.67 Aligned_cols=145 Identities=17% Similarity=0.217 Sum_probs=92.7
Q ss_pred ccccccccccEEEEEEec-CCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCcHHH
Q 002031 123 ETPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSE 201 (977)
Q Consensus 123 ~~piasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~E 201 (977)
.+-||+||||.||+|+++ +|..||||-.... .+..+..+.+..|+
T Consensus 15 ~~~iG~GsfavVykg~h~~~~~~VAIK~i~~~-----------------------------~l~~k~~e~L~~Ei----- 60 (429)
T KOG0595|consen 15 SREIGSGSFAVVYKGRHKKSGTEVAIKCIAKK-----------------------------KLNKKLVELLLSEI----- 60 (429)
T ss_pred hhhccCcceEEEEEeEeccCCceEEeeeehhh-----------------------------ccCHHHHHHHHHHH-----
Confidence 345999999999999984 7899999954211 00111222222233
Q ss_pred HHHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeee-cCCceEEeeccCCCCCCChHHHHhcCCCHHHHHHHHHH---H
Q 002031 202 AENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITR---A 277 (977)
Q Consensus 202 a~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~---~ 277 (977)
+-++.++| ...|.+-++.+ .+.-+||||||+|++|+++.. ..+.-.+..++...+ .
T Consensus 61 -~iLkel~H-----------------~nIV~l~d~~~~~~~i~lVMEyC~gGDLs~yi~--~~~~l~e~t~r~Fm~QLA~ 120 (429)
T KOG0595|consen 61 -KILKELKH-----------------PNIVRLLDCIEDDDFIYLVMEYCNGGDLSDYIR--RRGRLPEATARHFMQQLAS 120 (429)
T ss_pred -HHHHhcCC-----------------cceeeEEEEEecCCeEEEEEEeCCCCCHHHHHH--HcCCCCHHHHHHHHHHHHH
Confidence 33333322 11233334444 455689999999999998843 333222233332222 2
Q ss_pred HHHHHHhcCccccCCCCCCeEEccC-CC---CceEEEecccccccCHH
Q 002031 278 YAHQIYVDGFFNGDPHPGNFLVSKD-PP---HRPILLDFGLTKKLSSS 321 (977)
Q Consensus 278 ~l~~i~~~G~~H~D~hPgNIlv~~~-~~---g~i~LiDFG~~~~l~~~ 321 (977)
.++.+|..+|+|||+||.|||++.. .. -.++|.|||+++.+.+.
T Consensus 121 alq~L~~~~IiHRDLKPQNiLLs~~~~~~~~~~LKIADFGfAR~L~~~ 168 (429)
T KOG0595|consen 121 ALQFLHENNIIHRDLKPQNILLSTTARNDTSPVLKIADFGFARFLQPG 168 (429)
T ss_pred HHHHHHHCCeeeccCCcceEEeccCCCCCCCceEEecccchhhhCCch
Confidence 2777899999999999999999864 12 35899999999999853
|
|
| >cd05144 RIO2_C RIO kinase family; RIO2, C-terminal catalytic domain | Back alignment and domain information |
|---|
Probab=99.65 E-value=1.6e-15 Score=158.63 Aligned_cols=170 Identities=17% Similarity=0.251 Sum_probs=114.2
Q ss_pred ccccccccccEEEEEEecCCCEEEEEEecCChhhh--hHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCcHH
Q 002031 123 ETPLATASIAQVHRATLVDGRQVVVKVQHQGIKTI--ILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNS 200 (977)
Q Consensus 123 ~~piasaSigqV~~A~l~~G~~VAVKv~~p~i~~~--~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~ 200 (977)
.++|++|++|+||+|..++|+.||||+.+++.... ...+.+.+. . ........ ..+..+..
T Consensus 20 ~~~i~~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~~~~~----------~-~~~~~~~~------~~~~~~~~ 82 (198)
T cd05144 20 GNQIGVGKESDVYLALDPDGNPVALKFHRLGRTSFRKVKRKRDYLG----------D-RKHASWLY------LSRLAAQK 82 (198)
T ss_pred CCccccCcceEEEEEEcCCCCEEEEEEEecccchhhhhcchHHHHh----------c-cccchhHH------HhHHHHHH
Confidence 37899999999999998899999999987654211 100000000 0 00000000 11223455
Q ss_pred HHHHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeeecCCceEEeeccCCCCCCChHHHHhcCCCHHHHHHHHHHHHHH
Q 002031 201 EAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQSSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAYAH 280 (977)
Q Consensus 201 Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~l~ 280 (977)
|...+..+.+ ..+.+|.++.....++||||++|.+|.+.... .....++..++.. +.
T Consensus 83 E~~~l~~l~~------------------~~i~v~~~~~~~~~~lv~e~~~g~~L~~~~~~----~~~~~~~~~i~~~-l~ 139 (198)
T cd05144 83 EFAALKALYE------------------EGFPVPKPIDWNRHAVVMEYIDGVELYRVRVL----EDPEEVLDEILEE-IV 139 (198)
T ss_pred HHHHHHHHHH------------------cCCCCCceeecCCceEEEEEeCCcchhhcccc----ccHHHHHHHHHHH-HH
Confidence 6666666643 12457777776778999999999988765321 2344555555554 46
Q ss_pred HHHhcCccccCCCCCCeEEccCCCCceEEEecccccccCHHHHHHH----HHHHHHHH
Q 002031 281 QIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSSSMKQAL----AKMFFAAA 334 (977)
Q Consensus 281 ~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~~~r~~~----~~l~~a~~ 334 (977)
++|..|++|+|+||+||+++.+ ++++|+|||++..++.+.+..+ ...++++.
T Consensus 140 ~lh~~gi~H~Dl~p~Nill~~~--~~~~liDfg~~~~~~~~~~~~~~~~~~~~~~~~~ 195 (198)
T cd05144 140 KAYKHGIIHGDLSEFNILVDDD--EKIYIIDWPQMVSTDHPNAEELLDRDVENILRFF 195 (198)
T ss_pred HHHHCCCCcCCCCcccEEEcCC--CcEEEEECCccccCCCccHHHHHHHHHHHHHHHH
Confidence 7899999999999999999854 8999999999999999888886 45555544
|
The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO2 is present in archaea and eukaryotes. It contains an N-terminal winged helix (wHTH) domain and a C-terminal RIO kinase catalytic domain. The wHTH domain is primarily seen in DNA-binding proteins, although some wHTH dom |
| >KOG0593 consensus Predicted protein kinase KKIAMRE [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.61 E-value=1.5e-15 Score=159.11 Aligned_cols=148 Identities=21% Similarity=0.283 Sum_probs=102.9
Q ss_pred ccccccccEEEEEEec-CCCEEEEEEec-----CChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCc
Q 002031 125 PLATASIAQVHRATLV-DGRQVVVKVQH-----QGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDF 198 (977)
Q Consensus 125 piasaSigqV~~A~l~-~G~~VAVKv~~-----p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~ 198 (977)
.+|.||+|.|++++.+ +|+-||||... |.+++...++++.|+.+.+
T Consensus 9 kvGEGSYGvV~KCrnk~TgqIVAIKkF~Esedd~~VkKIAlREIrmLKqLkH---------------------------- 60 (396)
T KOG0593|consen 9 KVGEGSYGVVMKCRNKDTGQIVAIKKFVESEDDPVVKKIALREIRMLKQLKH---------------------------- 60 (396)
T ss_pred ccccCcceEEEEeccCCcccEEEEEeeccCCccHHHHHHHHHHHHHHHhccc----------------------------
Confidence 4899999999999986 79999999764 3344444444444443321
Q ss_pred HHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeeecCCceEEeeccCCCCCCChHHHHhcCCCHHHHHHHHHHHH
Q 002031 199 NSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQSSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY 278 (977)
Q Consensus 199 ~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~ 278 (977)
.|+..+-+.|++ ..+-.||.|||+-.-|.+++. ...|.+.+.+-..+.+++
T Consensus 61 ----~NLVnLiEVFrr------------------------krklhLVFE~~dhTvL~eLe~-~p~G~~~~~vk~~l~Q~l 111 (396)
T KOG0593|consen 61 ----ENLVNLIEVFRR------------------------KRKLHLVFEYCDHTVLHELER-YPNGVPSELVKKYLYQLL 111 (396)
T ss_pred ----chHHHHHHHHHh------------------------cceeEEEeeecchHHHHHHHh-ccCCCCHHHHHHHHHHHH
Confidence 244444443331 233469999999766655533 345777777666666655
Q ss_pred --HHHHHhcCccccCCCCCCeEEccCCCCceEEEecccccccCH---HHHHHHHHHHH
Q 002031 279 --AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS---SMKQALAKMFF 331 (977)
Q Consensus 279 --l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~---~~r~~~~~l~~ 331 (977)
+...|.++++|||+||+||||+.. |.++|+|||+++.++. -..+.++.-||
T Consensus 112 ~ai~~cHk~n~IHRDIKPENILit~~--gvvKLCDFGFAR~L~~pgd~YTDYVATRWY 167 (396)
T KOG0593|consen 112 KAIHFCHKNNCIHRDIKPENILITQN--GVVKLCDFGFARTLSAPGDNYTDYVATRWY 167 (396)
T ss_pred HHhhhhhhcCeecccCChhheEEecC--CcEEeccchhhHhhcCCcchhhhhhhhhhc
Confidence 667789999999999999999966 8999999999999972 23444455554
|
|
| >cd05119 RIO RIO kinase family, catalytic domain | Back alignment and domain information |
|---|
Probab=99.61 E-value=5.1e-15 Score=152.91 Aligned_cols=165 Identities=21% Similarity=0.292 Sum_probs=106.2
Q ss_pred cccccccccEEEEEEecCCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCcHHHHH
Q 002031 124 TPLATASIAQVHRATLVDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEAE 203 (977)
Q Consensus 124 ~piasaSigqV~~A~l~~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea~ 203 (977)
++||+|++|+||+|+..+|++||||+.+++.......+..++. ..... ....++..+ .+.....|.+
T Consensus 3 ~~lg~G~~g~Vy~a~~~~~~~vavKv~~~~~~~~~~~~~~~~~---~~~~~-~~~~~~~~~---------~~~~~~~e~~ 69 (187)
T cd05119 3 GPIGTGKEADVYLALDGDGEPVAVKIYRTGRTSFKKRKRYRTG---DYRFG-RKKSNWRYL---------SRLWAEKEFR 69 (187)
T ss_pred cccccccceeEEEEECCCCCEEEEEEEecCccchhhhhhhhHH---HHHhc-cCCcchhhh---------hhHHHHHHHH
Confidence 5799999999999998889999999998865432221211100 00000 000011000 1112234556
Q ss_pred HHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeeecCCceEEeeccCCCC-----CCChHHHHhcCCCHHHHHHHHHHHH
Q 002031 204 NTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQSSETVLILEFMDGIR-----LNDCESLEAFGVNKQKVVEEITRAY 278 (977)
Q Consensus 204 n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~~~~~vLVmE~i~G~~-----L~~~~~~~~~~~~~~~l~~~l~~~~ 278 (977)
++.++.. ..+.+|+++.+...+|||||++|.. +.+... ......++..++..
T Consensus 70 ~l~~l~~------------------~~~~~~~~~~~~~~~lv~e~~~g~~~~~~~l~~~~~----~~~~~~~~~~~~~~- 126 (187)
T cd05119 70 NLKRLYE------------------AGVPVPKPIDLNRHVLVMEFIGGDGIPAPRLKDVRL----LEDPEELYDQILEL- 126 (187)
T ss_pred HHHHHHH------------------cCCCCCceEecCCCEEEEEEeCCCCccChhhhhhhh----cccHHHHHHHHHHH-
Confidence 6666643 1356888887778899999999943 333211 02233444444443
Q ss_pred HHHHHh-cCccccCCCCCCeEEccCCCCceEEEecccccccCHHHHHHHH
Q 002031 279 AHQIYV-DGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSSSMKQALA 327 (977)
Q Consensus 279 l~~i~~-~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~~~r~~~~ 327 (977)
+..+|. .|++|+|+||+||+++ + +.++|+|||++.....+.+..+.
T Consensus 127 l~~lh~~~~ivH~Dl~p~Nili~-~--~~~~liDfg~a~~~~~~~~~~~~ 173 (187)
T cd05119 127 MRKLYREAGLVHGDLSEYNILVD-D--GKVYIIDVPQAVEIDHPNAEEFL 173 (187)
T ss_pred HHHHhhccCcCcCCCChhhEEEE-C--CcEEEEECcccccccCcchHHHH
Confidence 667788 9999999999999998 4 78999999999988877666654
|
The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases present in archaea, bacteria and eukaryotes. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. RIO kinases contain a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. Most organisms contain at least two RIO kinases, RIO1 and RIO2. A third protein, RIO3, is present in multicellular eukaryotes. In yeast, RIO1 and RIO2 are essential for survival. They funct |
| >KOG0605 consensus NDR and related serine/threonine kinases [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.61 E-value=2.3e-15 Score=169.00 Aligned_cols=150 Identities=17% Similarity=0.214 Sum_probs=99.9
Q ss_pred ccC-ccccccccccEEEEEEec-CCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccC
Q 002031 120 DFV-ETPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELD 197 (977)
Q Consensus 120 ~~d-~~piasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld 197 (977)
+|+ -++||.|.||+||.|+-+ +|+.+|+|+++.. ++-
T Consensus 142 DFe~Lk~IgkGAfGeVrLarKk~Tg~iyAmK~LkKS-------~M~---------------------------------- 180 (550)
T KOG0605|consen 142 DFELLKVIGKGAFGEVRLARKKDTGEIYAMKILKKS-------EML---------------------------------- 180 (550)
T ss_pred cchhheeeccccceeEEEEEEccCCcEEeeecccHH-------HHH----------------------------------
Confidence 344 389999999999999975 7999999987642 111
Q ss_pred cHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeee----cCCceEEeeccCCCCCCChHHHHhcCCCHHHHHHH
Q 002031 198 FNSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ----SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEE 273 (977)
Q Consensus 198 ~~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~----~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~ 273 (977)
-+.+.+|+..=|..+.. .. .-.|-++|. ....||||||++|+.+..+.. ...-+.....-..
T Consensus 181 ~~~Qv~hV~aERdiL~~------------~d-s~~vVKLyYsFQD~~~LYLiMEylPGGD~mTLL~-~~~~L~e~~arfY 246 (550)
T KOG0605|consen 181 KKNQVEHVRAERDILAE------------VD-SPWVVKLYYSFQDKEYLYLIMEYLPGGDMMTLLM-RKDTLTEDWARFY 246 (550)
T ss_pred hhhhHHHHHHHHHHhhh------------cC-CCcEEEEEEEecCCCeeEEEEEecCCccHHHHHH-hcCcCchHHHHHH
Confidence 11222333333333321 01 123344443 455699999999998876632 2122333333334
Q ss_pred HHHHH--HHHHHhcCccccCCCCCCeEEccCCCCceEEEecccccccCHHHHHHH
Q 002031 274 ITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSSSMKQAL 326 (977)
Q Consensus 274 l~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~~~r~~~ 326 (977)
+.+.+ +..||++|++||||||.|+||+.. |.|+|.|||++.-+....+..+
T Consensus 247 iaE~vlAI~~iH~~gyIHRDIKPdNlLiD~~--GHiKLSDFGLs~gl~~~~~~~~ 299 (550)
T KOG0605|consen 247 IAETVLAIESIHQLGYIHRDIKPDNLLIDAK--GHIKLSDFGLSTGLDKKHRIES 299 (550)
T ss_pred HHHHHHHHHHHHHcCcccccCChhheeecCC--CCEeeccccccchhhhhhhhhh
Confidence 44433 788999999999999999999966 9999999999988877666443
|
|
| >PRK10359 lipopolysaccharide core biosynthesis protein; Provisional | Back alignment and domain information |
|---|
Probab=99.58 E-value=8.4e-15 Score=154.28 Aligned_cols=140 Identities=21% Similarity=0.312 Sum_probs=97.9
Q ss_pred cccccccccEEEEEEecCCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCcHHHHH
Q 002031 124 TPLATASIAQVHRATLVDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEAE 203 (977)
Q Consensus 124 ~piasaSigqV~~A~l~~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea~ 203 (977)
+.++.|.+|+||.+.. +++.+|||+.+|.....- - +...+...=-|.+|++
T Consensus 37 ~~l~~~~f~~v~l~~~-~~~~~iiKvf~~~~~~~~---~-------------------------~~~~f~~g~~~e~Ea~ 87 (232)
T PRK10359 37 KVFRNIDDTKVSLIDT-DYGKYILKVFAPKVKRTE---R-------------------------FLKSFVKGDYYENLIV 87 (232)
T ss_pred EEecCCCceEEEEEec-CCCcEEEEEechhcCchH---H-------------------------HHHhhhhhHHHHHHHH
Confidence 7899999999999766 678999999998754220 0 0000001112568888
Q ss_pred HHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceee----------ecCCceEEeeccCCCCCCChHHHHhcCCCHHHHHHH
Q 002031 204 NTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVI----------QSSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEE 273 (977)
Q Consensus 204 n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~----------~~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~ 273 (977)
++.++.+. ++..|..+ .++..+|||||++|.+|.++.. .+. .....
T Consensus 88 ~l~rL~~~------------------GI~~~~d~~~~~~~~~~~~~~~~~lvmEyi~G~tL~~~~~-----~~~-~~~~~ 143 (232)
T PRK10359 88 QTDRVRSE------------------GLASLNDFYLLAERKTLRYAHTYIMLIEYIEGVELNDMPE-----ISE-DVKAK 143 (232)
T ss_pred HHHHHHHC------------------CCCcceEeeeecccccccccCCeEEEEEEECCccHHHhhh-----ccH-HHHHH
Confidence 99988651 23333322 1467899999999999977632 122 23333
Q ss_pred HHHHHHHHHHhcCccccCCCCCCeEEccCCCCceEEEecccccccCH
Q 002031 274 ITRAYAHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 320 (977)
Q Consensus 274 l~~~~l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 320 (977)
+ ...+.++|..|++||||||+||+++++ | ++|||||++....+
T Consensus 144 i-~~~l~~lH~~gi~H~Dikp~Nili~~~--g-i~liDfg~~~~~~e 186 (232)
T PRK10359 144 I-KASIESLHQHGMVSGDPHKGNFIVSKN--G-LRIIDLSGKRCTAQ 186 (232)
T ss_pred H-HHHHHHHHHcCCccCCCChHHEEEeCC--C-EEEEECCCcccccc
Confidence 3 335889999999999999999999865 6 99999999987754
|
|
| >KOG0581 consensus Mitogen-activated protein kinase kinase (MAP2K) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.54 E-value=8.1e-15 Score=158.61 Aligned_cols=139 Identities=19% Similarity=0.214 Sum_probs=93.0
Q ss_pred cccccccccEEEEEEec-CCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCcHHHH
Q 002031 124 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (977)
Q Consensus 124 ~piasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea 202 (977)
.-||+|+-|.||+++++ +++-+|+|+.+-+++.. +++++.+|++..++.
T Consensus 85 ~~lG~G~gG~V~kv~Hk~t~~i~AlK~I~~~~~~~------------------------------~~~Qi~rEl~il~~~ 134 (364)
T KOG0581|consen 85 GVLGSGNGGTVYKVRHKPTGKIYALKVILLNIDPA------------------------------LQKQILRELEILRSC 134 (364)
T ss_pred hhcccCCCcEEEEEEEcCCCeEEEEEeecccCCHH------------------------------HHHHHHHHHHHHhhC
Confidence 56999999999999985 88999999985443322 222222333222221
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceee---e-cC-CceEEeeccCCCCCCChHHHHhcCCCHHHHHHHHHHH
Q 002031 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVI---Q-SS-ETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRA 277 (977)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~---~-~~-~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~ 277 (977)
. .-+|-..| . .. .-.++||||+|++|+++... ...+....+.....++
T Consensus 135 ------~--------------------spyIV~~ygaF~~~~~~isI~mEYMDgGSLd~~~k~-~g~i~E~~L~~ia~~V 187 (364)
T KOG0581|consen 135 ------Q--------------------SPYIVGFYGAFYSNGEEISICMEYMDGGSLDDILKR-VGRIPEPVLGKIARAV 187 (364)
T ss_pred ------C--------------------CCCeeeEeEEEEeCCceEEeehhhcCCCCHHHHHhh-cCCCCHHHHHHHHHHH
Confidence 0 11222222 2 33 36799999999999987431 1223333333333333
Q ss_pred H--HHHHHh-cCccccCCCCCCeEEccCCCCceEEEecccccccCHH
Q 002031 278 Y--AHQIYV-DGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSSS 321 (977)
Q Consensus 278 ~--l~~i~~-~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~~ 321 (977)
+ +..+|+ ++|+|||+||.||||+.. |+|+|+|||..+.+...
T Consensus 188 L~GL~YLh~~~~IIHRDIKPsNlLvNsk--GeVKicDFGVS~~lvnS 232 (364)
T KOG0581|consen 188 LRGLSYLHEERKIIHRDIKPSNLLVNSK--GEVKICDFGVSGILVNS 232 (364)
T ss_pred HHHHHHHhhccCeeeccCCHHHeeeccC--CCEEeccccccHHhhhh
Confidence 3 778885 999999999999999965 99999999999988655
|
|
| >PF01163 RIO1: RIO1 family; InterPro: IPR018934 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases | Back alignment and domain information |
|---|
Probab=99.53 E-value=2.7e-14 Score=146.70 Aligned_cols=179 Identities=19% Similarity=0.256 Sum_probs=112.6
Q ss_pred EEEEEecCCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCcHHHHHHHHHHHHHhC
Q 002031 134 VHRATLVDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEAENTRIVSANLG 213 (977)
Q Consensus 134 V~~A~l~~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea~n~~~~~~~~~ 213 (977)
||.|...+|++||||+-+.+.. .+.. ....... ..++...-.-............+|++++.++..
T Consensus 2 Vy~~~~~~~~~~a~K~~r~~~~-~Fk~-------~~~y~~~---~~r~~~~~~~~~~~~~~~~~~~~E~~~L~~l~~--- 67 (188)
T PF01163_consen 2 VYHAIDPDGEEVAVKIYRTGRT-SFKR-------RKKYRDY---DYRFKKYRHKSSWRYLIREWAKKEFRNLKRLYE--- 67 (188)
T ss_dssp EEEEEECTTEEEEEEEE-S----SS-H-------HHHHTTT---STTSTTC--G--CHHHHHHHHHHHHHHHHHCCC---
T ss_pred EEEEECCCCCEEEEEEeccCce-EEEE-------eeeeecc---cchhcccccccCHHHHHHHHHHHHHHHHHHHHH---
Confidence 8999998999999999987643 2211 1111111 111110000000111122345678888887643
Q ss_pred CCCCCCCCCCCCCCCCCeEeceeeecCCceEEeeccC--CCCCCChHHHHhcCCCHHHHHHHHHHHHHHHHHhcCccccC
Q 002031 214 CKNKHEDSNKKPAYEVDVLIPEVIQSSETVLILEFMD--GIRLNDCESLEAFGVNKQKVVEEITRAYAHQIYVDGFFNGD 291 (977)
Q Consensus 214 ~~~~~~~~~~~~~~~~~v~vP~v~~~~~~vLVmE~i~--G~~L~~~~~~~~~~~~~~~l~~~l~~~~l~~i~~~G~~H~D 291 (977)
.++.||+++..++++|||||++ |.++..+........+...+...+++.+...+|..|++|+|
T Consensus 68 ---------------~Gv~vP~p~~~~~~~ivME~I~~~G~~~~~l~~~~~~~~~~~~~~~~il~~~~~~~~~~givHGD 132 (188)
T PF01163_consen 68 ---------------AGVPVPKPYDYNRNVIVMEYIGEDGVPLPRLKDVDLSPEEPKELLEEILEEIIKMLHKAGIVHGD 132 (188)
T ss_dssp ---------------TT-SS--EEEEETTEEEEE--EETTEEGGCHHHCGGGGSTHHHHHHHHHHHHHHHHHCTTEEESS
T ss_pred ---------------CCccCCcEEEEeCCEEEEEecCCCccchhhHHhccccchhHHHHHHHHHHHHHHHHHhcCceecC
Confidence 3688999999889999999999 99988765433223467778888888888888999999999
Q ss_pred CCCCCeEEccCCCCceEEEecccccccCHHHHHHHHHHHHHHHcCCHHHHHHHHHHcCcc
Q 002031 292 PHPGNFLVSKDPPHRPILLDFGLTKKLSSSMKQALAKMFFAAAEGDHVALLSAFAEMGLR 351 (977)
Q Consensus 292 ~hPgNIlv~~~~~g~i~LiDFG~~~~l~~~~r~~~~~l~~a~~~~d~~~~~~~~~~~g~~ 351 (977)
|++.|||+++ +++++||||.+....... ...++.+|.+.+.+.|.+.|..
T Consensus 133 Ls~~NIlv~~---~~~~iIDf~qav~~~~p~-------a~~~l~RDi~ni~~fF~~~~~~ 182 (188)
T PF01163_consen 133 LSEYNILVDD---GKVYIIDFGQAVDSSHPN-------AEELLRRDIENIIRFFKKKGVQ 182 (188)
T ss_dssp -STTSEEEET---TCEEE--GTTEEETTSTT-------HHHHHHHHHHHHHHHHHCCC--
T ss_pred CChhhEEeec---ceEEEEecCcceecCCcc-------HHHHHHHHHHHHHHHHHHhCCC
Confidence 9999999984 489999999998876432 2234567888899999888764
|
Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents RIO kinase, they exhibit little sequence similarity with eukaryotic protein kinases, and are classified as atypical protein kinases []. The conformation of ATP when bound to the RIO kinases is unique when compared with ePKs, such as serine/threonine kinases or the insulin receptor tyrosine kinase, suggesting that the detailed mechanism by which the catalytic aspartate of RIO kinases participates in phosphoryl transfer may not be identical to that employed in known serine/threonine ePKs. Representatives of the RIO family are present in organisms varying from Archaea to humans, although the RIO3 proteins have only been identified in multicellular eukaryotes, to date. Yeast Rio1 and Rio2 proteins are required for proper cell cycle progression and chromosome maintenance, and are necessary for survival of the cells. These proteins are involved in the processing of 20 S pre-rRNA via late 18 S rRNA processing. ; GO: 0003824 catalytic activity, 0005524 ATP binding; PDB: 1TQP_A 1ZAR_A 1TQI_A 1ZAO_A 1TQM_A 3RE4_A 1ZTH_B 1ZP9_A 1ZTF_A. |
| >KOG4250 consensus TANK binding protein kinase TBK1 [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.52 E-value=1.4e-14 Score=167.34 Aligned_cols=151 Identities=19% Similarity=0.290 Sum_probs=105.3
Q ss_pred ccccCccccccccccEEEEEEe-cCCCEEEEEEecCC----hhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhc
Q 002031 118 FMDFVETPLATASIAQVHRATL-VDGRQVVVKVQHQG----IKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEA 192 (977)
Q Consensus 118 f~~~d~~piasaSigqV~~A~l-~~G~~VAVKv~~p~----i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l 192 (977)
+...-.+-+|.|++|+||+++. .+|+.||||+-++. -.+....++.+|+++-
T Consensus 13 y~W~~~e~LG~Ga~g~V~rgrnketG~~vAvK~~~~~~~~r~~e~~~~EieilkKLn----------------------- 69 (732)
T KOG4250|consen 13 YLWEMDERLGKGAFGNVYRGRNKETGRLVAVKTFNKESSLRPRERWCREIEILKKLN----------------------- 69 (732)
T ss_pred cceeehhhhcCCccceeeeecccccccchhHHhhhhhcccchHHHHHHHHHHHHHcC-----------------------
Confidence 3344467899999999999996 58999999986642 2233333444444331
Q ss_pred ccccCcHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeee----cCCceEEeeccCCCCCCChHH--HHhcCCC
Q 002031 193 PKELDFNSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ----SSETVLILEFMDGIRLNDCES--LEAFGVN 266 (977)
Q Consensus 193 ~~Eld~~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~----~~~~vLVmE~i~G~~L~~~~~--~~~~~~~ 266 (977)
..|+.++ +.||+.-. +...|||||||.|++|..... ....|+.
T Consensus 70 ---------h~NIVk~----------------------f~iee~~~~~~~~~~~vlvmEyC~gGsL~~~L~~PEN~~GLp 118 (732)
T KOG4250|consen 70 ---------HPNIVKL----------------------FDIEETKFLGLVTRLPVLVMEYCSGGSLRKVLNSPENAYGLP 118 (732)
T ss_pred ---------chhhhhh----------------------cccCCccccCcccccceEEEeecCCCcHHHHhcCcccccCCC
Confidence 1222222 11222211 566799999999999976632 2345777
Q ss_pred HHHHHHHHHHHH--HHHHHhcCccccCCCCCCeEEccCCCCc--eEEEecccccccCHHH
Q 002031 267 KQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHR--PILLDFGLTKKLSSSM 322 (977)
Q Consensus 267 ~~~l~~~l~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~--i~LiDFG~~~~l~~~~ 322 (977)
..++...+..+. ++.++++||+|||||||||++-...+|+ -+|+|||+++.+++..
T Consensus 119 E~e~l~lL~d~~~al~~LrEn~IvHRDlKP~NIvl~~Gedgq~IyKLtDfG~Arel~d~s 178 (732)
T KOG4250|consen 119 ESEFLDLLSDLVSALRHLRENGIVHRDLKPGNIVLQIGEDGQSIYKLTDFGAARELDDNS 178 (732)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCceeccCCCCcEEEeecCCCceEEeeecccccccCCCCC
Confidence 777777776655 8899999999999999999987544465 3699999999998765
|
|
| >KOG0600 consensus Cdc2-related protein kinase [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=99.51 E-value=7.4e-15 Score=163.50 Aligned_cols=153 Identities=18% Similarity=0.276 Sum_probs=100.8
Q ss_pred CCChhhcccccCccccccccccEEEEEEe-cCCCEEEEEEec-----CChhhhhHhhHHHHHHHHHHHHhhCCCCCCchh
Q 002031 111 GESMGGMFMDFVETPLATASIAQVHRATL-VDGRQVVVKVQH-----QGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPI 184 (977)
Q Consensus 111 g~~~~~~f~~~d~~piasaSigqV~~A~l-~~G~~VAVKv~~-----p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~ 184 (977)
+..-.+.|+.++ -||.|.|||||+|+. .+|+.||+|-++ ++....+.+++.+|++
T Consensus 112 ~~r~~~~feki~--kIGeGTyg~VYkAr~~~tgkivALKKvr~d~~~~~~~~t~~REI~ILr~----------------- 172 (560)
T KOG0600|consen 112 GPRRADSFEKIE--KIGEGTYGQVYKARDLETGKIVALKKVRFDNEKEGFPITAIREIKILRR----------------- 172 (560)
T ss_pred cccchHHHHHHH--HhcCcchhheeEeeecccCcEEEEEEeecccCCCcchHHHHHHHHHHHh-----------------
Confidence 334456677775 499999999999996 689999999654 3333333333333333
Q ss_pred HHHHhhhcccccCcHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeee---cCCceEEeeccCCCCCCChHHHH
Q 002031 185 IDEWCKEAPKELDFNSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ---SSETVLILEFMDGIRLNDCESLE 261 (977)
Q Consensus 185 ~~e~~~~l~~Eld~~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~---~~~~vLVmE~i~G~~L~~~~~~~ 261 (977)
+.| ...+.+-.+.. ++.-|||+|||+ .|+.-+.
T Consensus 173 -----------------------l~H-----------------pNIikL~eivt~~~~~siYlVFeYMd----hDL~GLl 208 (560)
T KOG0600|consen 173 -----------------------LDH-----------------PNIIKLEEIVTSKLSGSIYLVFEYMD----HDLSGLL 208 (560)
T ss_pred -----------------------cCC-----------------CcccceeeEEEecCCceEEEEEeccc----chhhhhh
Confidence 221 01122222221 466799999998 3433322
Q ss_pred h---cCCCHHHHHHHHHHHH--HHHHHhcCccccCCCCCCeEEccCCCCceEEEecccccccCHHHHHHHHH
Q 002031 262 A---FGVNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSSSMKQALAK 328 (977)
Q Consensus 262 ~---~~~~~~~l~~~l~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~~~r~~~~~ 328 (977)
. ..+...++--.+-+++ ++++|..||+|||||..||||+.+ |.++|.|||+++.++...+..|..
T Consensus 209 ~~p~vkft~~qIKc~mkQLl~Gl~~cH~~gvlHRDIK~SNiLidn~--G~LKiaDFGLAr~y~~~~~~~~T~ 278 (560)
T KOG0600|consen 209 SSPGVKFTEPQIKCYMKQLLEGLEYCHSRGVLHRDIKGSNILIDNN--GVLKIADFGLARFYTPSGSAPYTS 278 (560)
T ss_pred cCCCcccChHHHHHHHHHHHHHHHHHhhcCeeeccccccceEEcCC--CCEEeccccceeeccCCCCccccc
Confidence 2 2344444444444443 778899999999999999999955 999999999999888776665443
|
|
| >KOG1163 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.51 E-value=4.8e-14 Score=143.46 Aligned_cols=138 Identities=22% Similarity=0.371 Sum_probs=101.2
Q ss_pred cccccccccEEEEEEe-cCCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCcHHHH
Q 002031 124 TPLATASIAQVHRATL-VDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (977)
Q Consensus 124 ~piasaSigqV~~A~l-~~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea 202 (977)
++||+||||-+|.|.. .+|++||||+-...+.. | .+..|+
T Consensus 21 rkiGsGSFGdIy~~~~i~~ge~VAiK~Es~~a~h--------------------p-------------------qL~yEs 61 (341)
T KOG1163|consen 21 RKIGSGSFGDIYLGISITSGEEVAIKLESSKAKH--------------------P-------------------QLLYES 61 (341)
T ss_pred EeecCCchhheeeeeeccCCceEEEEeecccCCC--------------------c-------------------chhHHH
Confidence 7899999999999985 79999999986544321 1 123455
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeee----cCCceEEeeccCCCCCCChHHHHhcCCCHHHHHHHHHHHH
Q 002031 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ----SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY 278 (977)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~----~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~ 278 (977)
+--..+++ .+-+|.+.+ ...+|||||.+ |.+|.++.......+..+.+.-..=+.+
T Consensus 62 kvY~iL~~-------------------g~GiP~i~~y~~e~~ynvlVMdLL-GPsLEdLfnfC~R~ftmkTvLMLaDQml 121 (341)
T KOG1163|consen 62 KVYRILQG-------------------GVGIPHIRHYGTEKDYNVLVMDLL-GPSLEDLFNFCSRRFTMKTVLMLADQML 121 (341)
T ss_pred HHHHHhcc-------------------CCCCchhhhhccccccceeeeecc-CccHHHHHHHHhhhhhHHhHHHHHHHHH
Confidence 54444432 466787765 34579999988 9999998777766666555444333333
Q ss_pred --HHHHHhcCccccCCCCCCeEEccC-CCCceEEEecccccccCH
Q 002031 279 --AHQIYVDGFFNGDPHPGNFLVSKD-PPHRPILLDFGLTKKLSS 320 (977)
Q Consensus 279 --l~~i~~~G~~H~D~hPgNIlv~~~-~~g~i~LiDFG~~~~l~~ 320 (977)
++.+|.++|+||||||.|+|..-. -..++.|||||+++.+-+
T Consensus 122 ~RiEyvH~r~fiHRDIKPdNFLMGlgrh~~kl~LIDFGLaKky~d 166 (341)
T KOG1163|consen 122 SRIEYVHLRNFIHRDIKPDNFLMGLGRHCNKLYLIDFGLAKKYRD 166 (341)
T ss_pred HHHHHHHhhccccccCCccceeeccccccceEEEEeccchhhhcc
Confidence 788999999999999999998532 125799999999987743
|
|
| >KOG0615 consensus Serine/threonine protein kinase Chk2 and related proteins [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=99.50 E-value=5.5e-14 Score=153.12 Aligned_cols=147 Identities=23% Similarity=0.290 Sum_probs=100.1
Q ss_pred ccccccccccEEEEEEe-cCCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCcHHH
Q 002031 123 ETPLATASIAQVHRATL-VDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSE 201 (977)
Q Consensus 123 ~~piasaSigqV~~A~l-~~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~E 201 (977)
.+.+|+|.||.|-.|.. ++|+.|||||.+..--... ......+.|..+|
T Consensus 177 ~~~LGsGafg~Vkla~e~~tgk~vAiKIi~krk~~~~------------------------------s~~~~~~~~v~~E 226 (475)
T KOG0615|consen 177 SKTLGSGAFGLVKLAYEKKTGKQVAIKIINKRKSTGC------------------------------SRAIAKTRDVQNE 226 (475)
T ss_pred eeeecCCceeEEEEEEEcccCcEEEeeeeehhhcccc------------------------------cccccchhhhHHH
Confidence 47899999999999986 5899999999764211000 0011234456778
Q ss_pred HHHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeee-cCCceEEeeccCCCCCCChHHHHhcCCCH----HHHHHHHHH
Q 002031 202 AENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAFGVNK----QKVVEEITR 276 (977)
Q Consensus 202 a~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLVmE~i~G~~L~~~~~~~~~~~~~----~~l~~~l~~ 276 (977)
++-+.++.| +..|.+-..+. ....|+||||++|+.|-+... +.+.-. +.+...++.
T Consensus 227 ieILkkL~H-----------------P~IV~~~d~f~~~ds~YmVlE~v~GGeLfd~vv--~nk~l~ed~~K~~f~Qll~ 287 (475)
T KOG0615|consen 227 IEILKKLSH-----------------PNIVRIKDFFEVPDSSYMVLEYVEGGELFDKVV--ANKYLREDLGKLLFKQLLT 287 (475)
T ss_pred HHHHHhcCC-----------------CCEEEEeeeeecCCceEEEEEEecCccHHHHHH--hccccccchhHHHHHHHHH
Confidence 887777643 12244444444 344599999999999877632 222222 233344444
Q ss_pred HHHHHHHhcCccccCCCCCCeEEccC-CCCceEEEecccccccC
Q 002031 277 AYAHQIYVDGFFNGDPHPGNFLVSKD-PPHRPILLDFGLTKKLS 319 (977)
Q Consensus 277 ~~l~~i~~~G~~H~D~hPgNIlv~~~-~~g~i~LiDFG~~~~l~ 319 (977)
+ +..||..||.||||||.|||+..+ .+-.+++.|||+++...
T Consensus 288 a-vkYLH~~GI~HRDiKPeNILl~~~~e~~llKItDFGlAK~~g 330 (475)
T KOG0615|consen 288 A-VKYLHSQGIIHRDIKPENILLSNDAEDCLLKITDFGLAKVSG 330 (475)
T ss_pred H-HHHHHHcCcccccCCcceEEeccCCcceEEEecccchhhccc
Confidence 3 678999999999999999999854 34578999999998774
|
|
| >PRK09188 serine/threonine protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.49 E-value=1.2e-13 Score=156.19 Aligned_cols=139 Identities=15% Similarity=0.221 Sum_probs=96.0
Q ss_pred ccccccccccEEEEEEec--CCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCcHH
Q 002031 123 ETPLATASIAQVHRATLV--DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNS 200 (977)
Q Consensus 123 ~~piasaSigqV~~A~l~--~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~ 200 (977)
.+.||+|+||+||+|+.+ +|+.||||+..+..... ..+ . ....|.+
T Consensus 23 ~~~IG~G~fg~Vy~a~~~~~~~~~vAiK~~~~~~~~~-~~~-------------------------~------~~~~~~~ 70 (365)
T PRK09188 23 TAVLKRDVFSTVERGYFAGDPGTARAVRRRVSEVPWW-SKP-------------------------L------ARHLAAR 70 (365)
T ss_pred ccEEeecCcEEEEEEEEcCCCCeEEEEEEeccccccc-ccH-------------------------H------HHHHHHH
Confidence 367999999999999874 67888999765321100 000 0 0012567
Q ss_pred HHHHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeeecCCceEEeeccCCCCCCChHHHHhcCCCHHHHHHHHHHHHHH
Q 002031 201 EAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQSSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAYAH 280 (977)
Q Consensus 201 Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~l~ 280 (977)
|++.+.++.+ .-.||.++.....+|||||++|.+|... .. .....+...+++ .+.
T Consensus 71 E~~iL~~L~h-------------------~~iv~~l~~~~~~~LVmE~~~G~~L~~~---~~--~~~~~~~~~i~~-aL~ 125 (365)
T PRK09188 71 EIRALKTVRG-------------------IGVVPQLLATGKDGLVRGWTEGVPLHLA---RP--HGDPAWFRSAHR-ALR 125 (365)
T ss_pred HHHHHHhccC-------------------CCCCcEEEEcCCcEEEEEccCCCCHHHh---Cc--cchHHHHHHHHH-HHH
Confidence 7777776643 1235666666778999999999888522 11 112334444443 377
Q ss_pred HHHhcCccccCC-CCCCeEEccCCCCceEEEecccccccCH
Q 002031 281 QIYVDGFFNGDP-HPGNFLVSKDPPHRPILLDFGLTKKLSS 320 (977)
Q Consensus 281 ~i~~~G~~H~D~-hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 320 (977)
++|..|++|||+ ||+|||++.+ ++++|+|||+++.+.+
T Consensus 126 ~lH~~gIiHrDL~KP~NILv~~~--~~ikLiDFGlA~~~~~ 164 (365)
T PRK09188 126 DLHRAGITHNDLAKPQNWLMGPD--GEAAVIDFQLASVFRR 164 (365)
T ss_pred HHHHCCCeeCCCCCcceEEEcCC--CCEEEEECccceeccc
Confidence 899999999999 8999999754 7899999999998864
|
|
| >PRK14879 serine/threonine protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.47 E-value=3.2e-13 Score=142.37 Aligned_cols=142 Identities=20% Similarity=0.269 Sum_probs=99.9
Q ss_pred cccccccccEEEEEEecCCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCcHHHHH
Q 002031 124 TPLATASIAQVHRATLVDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEAE 203 (977)
Q Consensus 124 ~piasaSigqV~~A~l~~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea~ 203 (977)
++||+|++|.||+|+. +|+.|+||+..+.....-..|.. + ....+.+|++
T Consensus 2 ~~l~~G~~~~vy~~~~-~~~~~~vK~~~~~~~~~~~~~~~------------------------~-----~~~~~~~E~~ 51 (211)
T PRK14879 2 KLIKRGAEAEIYLGDF-LGIKAVIKWRIPKRYRHPELDER------------------------I-----RRERTRREAR 51 (211)
T ss_pred cccccCceEEEEEEee-CCCceEEEEeCCcCCcChHHHHH------------------------H-----HHHHHHHHHH
Confidence 4689999999999987 78899999877643221111100 0 0113456777
Q ss_pred HHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeee--cCCceEEeeccCCCCCCChHHHHhcCCCHHHHHHHHHHHHHHH
Q 002031 204 NTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ--SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAYAHQ 281 (977)
Q Consensus 204 n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~--~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~l~~ 281 (977)
++..+.+ ..+.+|.++. ....+|||||++|.+|.++... .......++..+.. .+.+
T Consensus 52 ~l~~l~~------------------~~i~~p~~~~~~~~~~~lv~e~~~G~~L~~~~~~--~~~~~~~i~~~i~~-~l~~ 110 (211)
T PRK14879 52 IMSRARK------------------AGVNVPAVYFVDPENFIIVMEYIEGEPLKDLINS--NGMEELELSREIGR-LVGK 110 (211)
T ss_pred HHHHHHH------------------CCCCCCeEEEEeCCCCEEEEEEeCCcCHHHHHHh--ccHHHHHHHHHHHH-HHHH
Confidence 7776653 2466777763 6778999999999999876432 11122344444443 3778
Q ss_pred HHhcCccccCCCCCCeEEccCCCCceEEEecccccccC
Q 002031 282 IYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 319 (977)
Q Consensus 282 i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~ 319 (977)
+|..|++|+|+||+|||++ + +.++|+|||+++...
T Consensus 111 lH~~~i~H~Dl~p~Nil~~-~--~~~~liDf~~a~~~~ 145 (211)
T PRK14879 111 LHSAGIIHGDLTTSNMILS-G--GKIYLIDFGLAEFSK 145 (211)
T ss_pred HHhCCcccCCCCcccEEEE-C--CCEEEEECCcccCCC
Confidence 9999999999999999998 3 789999999988644
|
|
| >KOG0661 consensus MAPK related serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.47 E-value=3.9e-14 Score=156.69 Aligned_cols=153 Identities=20% Similarity=0.263 Sum_probs=101.4
Q ss_pred cccccccccEEEEEEe-cCCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCcHHHH
Q 002031 124 TPLATASIAQVHRATL-VDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (977)
Q Consensus 124 ~piasaSigqV~~A~l-~~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea 202 (977)
+-+|.|+||.||+|+. .+|+.||||-.+..... . +|+-=.+|.
T Consensus 16 ~klGDGTfGsV~la~~~~~~~~VAIK~MK~Kf~s--~----------------------------------ee~~nLREv 59 (538)
T KOG0661|consen 16 RKLGDGTFGSVYLAKSKETGELVAIKKMKKKFYS--W----------------------------------EECMNLREV 59 (538)
T ss_pred HHhcCCcceeEEEeeecCCCceeeHHHHHhhhcc--H----------------------------------HHHHHHHHH
Confidence 4589999999999996 47999999943221110 0 112223344
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeeec--CCceEEeeccCCCCCCChHHHHhcCCCHHHHHHHHHHHH--
Q 002031 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQS--SETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY-- 278 (977)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~~--~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~-- 278 (977)
+.+.++.. ...-+.+-+|+.. ...++|||||+ ..|.++..-+...+....+...+.+++
T Consensus 60 ksL~kln~----------------hpniikL~Evi~d~~~~L~fVfE~Md-~NLYqLmK~R~r~fse~~irnim~QilqG 122 (538)
T KOG0661|consen 60 KSLRKLNP----------------HPNIIKLKEVIRDNDRILYFVFEFMD-CNLYQLMKDRNRLFSESDIRNIMYQILQG 122 (538)
T ss_pred HHHHhcCC----------------CCcchhhHHHhhccCceEeeeHHhhh-hhHHHHHhhcCCcCCHHHHHHHHHHHHHH
Confidence 44444321 1122334444432 24579999997 566666544445566777777777777
Q ss_pred HHHHHhcCccccCCCCCCeEEccCCCCceEEEecccccccCHH--HHHHHHHHHH
Q 002031 279 AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSSS--MKQALAKMFF 331 (977)
Q Consensus 279 l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~~--~r~~~~~l~~ 331 (977)
+..||++||||||+||+||||.. ..-|+|.|||+++.+... ..+.+..-||
T Consensus 123 L~hiHk~GfFHRDlKPENiLi~~--~~~iKiaDFGLARev~SkpPYTeYVSTRWY 175 (538)
T KOG0661|consen 123 LAHIHKHGFFHRDLKPENILISG--NDVIKIADFGLAREVRSKPPYTEYVSTRWY 175 (538)
T ss_pred HHHHHhcCcccccCChhheEecc--cceeEecccccccccccCCCcchhhhcccc
Confidence 89999999999999999999983 357999999999988543 3444444454
|
|
| >KOG0574 consensus STE20-like serine/threonine kinase MST [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.47 E-value=1.4e-14 Score=150.78 Aligned_cols=159 Identities=18% Similarity=0.213 Sum_probs=120.6
Q ss_pred HHHHHHHHHhCCChhhcccccCccccccccccEEEEEEec-CCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCC
Q 002031 101 EVSQTIEREFGESMGGMFMDFVETPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQY 179 (977)
Q Consensus 101 ~v~~~l~~elg~~~~~~f~~~d~~piasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~ 179 (977)
+..++=+..+.++++|+|.-.+ .+|.||+|.||+|.++ +|+.||||-.. +..||+
T Consensus 18 ~~~KLd~~sL~K~PEEVFDi~~--KLGEGSYGSV~KAIH~EsG~v~AIK~VP------V~sDLQ---------------- 73 (502)
T KOG0574|consen 18 DGFKLDSSALNKPPEEVFDIVG--KLGEGSYGSVHKAIHRESGHVLAIKKVP------VDTDLQ---------------- 73 (502)
T ss_pred cccccChhhhcCChHHHHHHHH--HhcCCcchHHHHHHHhccCcEEEEEecC------ccchHH----------------
Confidence 4455666788899999998775 4999999999999975 89999999543 223332
Q ss_pred CCchhHHHHhhhcccccCcHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeee----cCCceEEeeccCCCCCC
Q 002031 180 DFNPIIDEWCKEAPKELDFNSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ----SSETVLILEFMDGIRLN 255 (977)
Q Consensus 180 ~~~~~~~e~~~~l~~Eld~~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~----~~~~vLVmE~i~G~~L~ 255 (977)
+++.| ..-+.++. .-+|-+.|. .++.++|||||..++++
T Consensus 74 ---EIIKE--------------ISIMQQC~--------------------S~yVVKYYGSYFK~sDLWIVMEYCGAGSiS 116 (502)
T KOG0574|consen 74 ---EIIKE--------------ISIMQQCK--------------------SKYVVKYYGSYFKHSDLWIVMEYCGAGSIS 116 (502)
T ss_pred ---HHHHH--------------HHHHHHcC--------------------CchhhhhhhhhccCCceEeehhhcCCCcHH
Confidence 22221 12222211 122333332 67889999999999999
Q ss_pred ChHHHHhcCCCHHHHHHHHHHHH--HHHHHhcCccccCCCCCCeEEccCCCCceEEEecccccccCHHH
Q 002031 256 DCESLEAFGVNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSSSM 322 (977)
Q Consensus 256 ~~~~~~~~~~~~~~l~~~l~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~~~ 322 (977)
|+..++...+...+++..+...+ ++.+|...-+|||+|.||||++.+ |..+|.|||.++++++..
T Consensus 117 DI~R~R~K~L~E~EIs~iL~~TLKGL~YLH~~~KIHRDIKAGNILLNT~--G~AKLADFGVAGQLTDTM 183 (502)
T KOG0574|consen 117 DIMRARRKPLSEQEISAVLRDTLKGLQYLHDLKKIHRDIKAGNILLNTD--GIAKLADFGVAGQLTDTM 183 (502)
T ss_pred HHHHHhcCCccHHHHHHHHHHHHhHHHHHHHHHHHHhhcccccEEEccc--chhhhhhccccchhhhhH
Confidence 99888887888888888777766 888888889999999999999966 899999999999998865
|
|
| >KOG4236 consensus Serine/threonine protein kinase PKC mu/PKD and related proteins [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.45 E-value=1.1e-13 Score=153.60 Aligned_cols=160 Identities=18% Similarity=0.260 Sum_probs=108.8
Q ss_pred ChhhcccccCccccccccccEEEEEEe-cCCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhh
Q 002031 113 SMGGMFMDFVETPLATASIAQVHRATL-VDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKE 191 (977)
Q Consensus 113 ~~~~~f~~~d~~piasaSigqV~~A~l-~~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~ 191 (977)
++..+|+-|.++.+|||-||.||-|+. ++|++|||||+.. ++..
T Consensus 559 d~stvYQif~devLGSGQFG~VYgg~hRktGrdVAvKvIdK-----------------------------------lrFp 603 (888)
T KOG4236|consen 559 DISTVYQIFADEVLGSGQFGTVYGGKHRKTGRDVAVKVIDK-----------------------------------LRFP 603 (888)
T ss_pred hHHHHHHhhhHhhccCCcceeeecceecccCceeeeeeeec-----------------------------------ccCC
Confidence 567888889899999999999999997 5999999998632 0111
Q ss_pred cccccCcHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCC-eEeceeeecCCc-eEEeeccCCCCCCChHHHHhcCCCHHH
Q 002031 192 APKELDFNSEAENTRIVSANLGCKNKHEDSNKKPAYEVD-VLIPEVIQSSET-VLILEFMDGIRLNDCESLEAFGVNKQK 269 (977)
Q Consensus 192 l~~Eld~~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~-v~vP~v~~~~~~-vLVmE~i~G~~L~~~~~~~~~~~~~~~ 269 (977)
..+|-.+++|.+-++.+.+ ++ |..-..+++.++ +.|||-+.|.-|.-+...+. |.-.++
T Consensus 604 ~kqesqlR~EVaILq~l~H------------------PGiV~le~M~ET~ervFVVMEKl~GDMLEMILSsEk-gRL~er 664 (888)
T KOG4236|consen 604 TKQESQLRNEVAILQNLHH------------------PGIVNLECMFETPERVFVVMEKLHGDMLEMILSSEK-GRLPER 664 (888)
T ss_pred CchHHHHHHHHHHHHhcCC------------------CCeeEEEEeecCCceEEEEehhhcchHHHHHHHhhc-ccchHH
Confidence 1234445667666655432 23 344444555444 57999999977766544332 222222
Q ss_pred HHHH-HHH--HHHHHHHhcCccccCCCCCCeEEccCC-CCceEEEecccccccCHH-HHHHH
Q 002031 270 VVEE-ITR--AYAHQIYVDGFFNGDPHPGNFLVSKDP-PHRPILLDFGLTKKLSSS-MKQAL 326 (977)
Q Consensus 270 l~~~-l~~--~~l~~i~~~G~~H~D~hPgNIlv~~~~-~g~i~LiDFG~~~~l~~~-~r~~~ 326 (977)
+-+- +.+ ..++.+|..||+|||+||+|||+.... --+++|+|||.++.+.++ +|+.+
T Consensus 665 ~TkFlvtQIL~ALr~LH~knIvHCDLKPENVLLas~~~FPQvKlCDFGfARiIgEksFRrsV 726 (888)
T KOG4236|consen 665 ITKFLVTQILVALRYLHFKNIVHCDLKPENVLLASASPFPQVKLCDFGFARIIGEKSFRRSV 726 (888)
T ss_pred HHHHHHHHHHHHHHHhhhcceeeccCCchheeeccCCCCCceeeccccceeecchhhhhhhh
Confidence 2221 222 237888999999999999999997542 247999999999999775 45543
|
|
| >KOG0667 consensus Dual-specificity tyrosine-phosphorylation regulated kinase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.45 E-value=3.5e-13 Score=155.51 Aligned_cols=146 Identities=16% Similarity=0.155 Sum_probs=97.6
Q ss_pred ccccccccccEEEEEEe-cCCCEEEEEEecCChh--hhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCcH
Q 002031 123 ETPLATASIAQVHRATL-VDGRQVVVKVQHQGIK--TIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFN 199 (977)
Q Consensus 123 ~~piasaSigqV~~A~l-~~G~~VAVKv~~p~i~--~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~ 199 (977)
.+.||.|+||||-||.. ++++.|||||++-.-. .+..
T Consensus 191 ~e~LGkGtFGQVvk~~d~~T~e~VAIKIiKN~k~f~~Q~~---------------------------------------- 230 (586)
T KOG0667|consen 191 LEVLGKGSFGQVVKAYDHKTGEIVAIKIIKNKKRFLRQAQ---------------------------------------- 230 (586)
T ss_pred EEEecccccceeEEEEecCCCcEEEEEeeccChHHHHHHH----------------------------------------
Confidence 47899999999999997 5899999999864321 1211
Q ss_pred HHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeee----cCCceEEeeccCCCCCCChHHHH-hcCCCHHHHHHHH
Q 002031 200 SEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ----SSETVLILEFMDGIRLNDCESLE-AFGVNKQKVVEEI 274 (977)
Q Consensus 200 ~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~----~~~~vLVmE~i~G~~L~~~~~~~-~~~~~~~~l~~~l 274 (977)
.|.+-++.+++. . ......+-+.+. ....+||.|.+ +..|.++.... -.|++...+...+
T Consensus 231 ~Ei~iL~~ln~~-d-------------~~~~~n~Vrm~d~F~fr~HlciVfELL-~~NLYellK~n~f~Glsl~~ir~~~ 295 (586)
T KOG0667|consen 231 IEIRILELLNKH-D-------------PDDKYNIVRMLDYFYFRNHLCIVFELL-STNLYELLKNNKFRGLSLPLVRKFA 295 (586)
T ss_pred HHHHHHHHHhcc-C-------------CCCCeeEEEeeeccccccceeeeehhh-hhhHHHHHHhcCCCCCCHHHHHHHH
Confidence 233344444321 0 112234444443 56678999998 57777774432 2345554444333
Q ss_pred HHHH--HHHHHhcCccccCCCCCCeEEccCCCCceEEEecccccccCHHHH
Q 002031 275 TRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSSSMK 323 (977)
Q Consensus 275 ~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~~~r 323 (977)
.+++ +..|++.|||||||||+|||+..-...+|++||||.+...++..-
T Consensus 296 ~Qil~~L~~L~~l~IIHcDLKPENILL~~~~r~~vKVIDFGSSc~~~q~vy 346 (586)
T KOG0667|consen 296 QQILTALLFLHELGIIHCDLKPENILLKDPKRSRIKVIDFGSSCFESQRVY 346 (586)
T ss_pred HHHHHHHHHHHhCCeeeccCChhheeeccCCcCceeEEecccccccCCcce
Confidence 3333 667889999999999999999765456899999999998876543
|
|
| >KOG0659 consensus Cdk activating kinase (CAK)/RNA polymerase II transcription initiation/nucleotide excision repair factor TFIIH/TFIIK, kinase subunit CDK7 [Cell cycle control, cell division, chromosome partitioning; Transcription; Replication, recombination and repair] | Back alignment and domain information |
|---|
Probab=99.44 E-value=1.1e-13 Score=143.12 Aligned_cols=143 Identities=21% Similarity=0.253 Sum_probs=94.8
Q ss_pred ccccccccccEEEEEEe-cCCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCcHHH
Q 002031 123 ETPLATASIAQVHRATL-VDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSE 201 (977)
Q Consensus 123 ~~piasaSigqV~~A~l-~~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~E 201 (977)
.+-+|.|.+|.||+|+. .+|+.||||-.+.+-.+ +.+.....+|+.+.+|
T Consensus 7 ~~~lGEG~~gvVyka~d~~t~~~VAIKKIkl~~~k-----------------------------dGi~~talREIK~Lqe 57 (318)
T KOG0659|consen 7 LEKLGEGTYGVVYKARDTETGKRVAIKKIKLGNAK-----------------------------DGINRTALREIKLLQE 57 (318)
T ss_pred hhhhcCcceEEEEEEEecCCCcEEEEEEeeccccc-----------------------------cCccHHHHHHHHHHHH
Confidence 35689999999999996 68999999976654110 1111112233333334
Q ss_pred HH--HHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeeecCCceEEeeccCCCCCCChHHH---HhcCCCHHHHHHHHHH
Q 002031 202 AE--NTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQSSETVLILEFMDGIRLNDCESL---EAFGVNKQKVVEEITR 276 (977)
Q Consensus 202 a~--n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~~~~~vLVmE~i~G~~L~~~~~~---~~~~~~~~~l~~~l~~ 276 (977)
.+ |+..+.+.|-. .+.-.||.||++ +|++.. +..-+.+..+-..+..
T Consensus 58 l~h~nIi~LiD~F~~------------------------~~~l~lVfEfm~----tdLe~vIkd~~i~l~pa~iK~y~~m 109 (318)
T KOG0659|consen 58 LKHPNIIELIDVFPH------------------------KSNLSLVFEFMP----TDLEVVIKDKNIILSPADIKSYMLM 109 (318)
T ss_pred ccCcchhhhhhhccC------------------------CCceEEEEEecc----ccHHHHhcccccccCHHHHHHHHHH
Confidence 32 33333332211 344569999998 444332 2223455566555555
Q ss_pred HH--HHHHHhcCccccCCCCCCeEEccCCCCceEEEecccccccCHHHHH
Q 002031 277 AY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSSSMKQ 324 (977)
Q Consensus 277 ~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~~~r~ 324 (977)
.+ ++.+|.+.++|||+||.|+||+.+ |.++|.|||+++.+....+.
T Consensus 110 ~LkGl~y~H~~~IlHRDlKPnNLLis~~--g~lKiADFGLAr~f~~p~~~ 157 (318)
T KOG0659|consen 110 TLKGLAYCHSKWILHRDLKPNNLLISSD--GQLKIADFGLARFFGSPNRI 157 (318)
T ss_pred HHHHHHHHHhhhhhcccCCccceEEcCC--CcEEeecccchhccCCCCcc
Confidence 55 778899999999999999999966 99999999999988755444
|
|
| >KOG0594 consensus Protein kinase PCTAIRE and related kinases [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.43 E-value=3.8e-13 Score=145.58 Aligned_cols=148 Identities=21% Similarity=0.227 Sum_probs=91.6
Q ss_pred hcccccCccccccccccEEEEEEe-cCCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhccc
Q 002031 116 GMFMDFVETPLATASIAQVHRATL-VDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPK 194 (977)
Q Consensus 116 ~~f~~~d~~piasaSigqV~~A~l-~~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ 194 (977)
+.|+.++. +|.|++|.||+|+. .+|+.||+|.++-.-++.- .|
T Consensus 11 ~~~~~~ek--lGeGtyg~Vykar~~~~g~~VALKkirl~~~~EG-----------------~P----------------- 54 (323)
T KOG0594|consen 11 FDYEKVEK--LGEGTYGVVYKARSKRTGKFVALKKIRLEFEEEG-----------------VP----------------- 54 (323)
T ss_pred HHHHHHHH--hCCCCceEEEEEEEecCCCEEEEEEEeccccccC-----------------CC-----------------
Confidence 34555544 99999999999997 5899999998763322100 00
Q ss_pred ccCcHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeee-cC------CceEEeeccCCCCCCChHHHHh---cC
Q 002031 195 ELDFNSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SS------ETVLILEFMDGIRLNDCESLEA---FG 264 (977)
Q Consensus 195 Eld~~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~------~~vLVmE~i~G~~L~~~~~~~~---~~ 264 (977)
..-.+|..-++++++. ++ .+.+-.+.. .+ .-+||+||++ .+|.++..... .+
T Consensus 55 -~taiREisllk~L~~~---------------~~-iv~L~dv~~~~~~~~~~~~l~lvfe~~d-~DL~~ymd~~~~~~~g 116 (323)
T KOG0594|consen 55 -STAIREISLLKRLSHA---------------NH-IVRLHDVIHTSNNHRGIGKLYLVFEFLD-RDLKKYMDSLPKKPQG 116 (323)
T ss_pred -chhhHHHHHHHHhCCC---------------cc-eEEEEeeeeecccccccceEEEEEEeec-ccHHHHHHhccccccC
Confidence 0112333444444321 01 223333333 22 4569999997 23333322222 24
Q ss_pred CCHHHHHHHHHHHH--HHHHHhcCccccCCCCCCeEEccCCCCceEEEecccccccC
Q 002031 265 VNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 319 (977)
Q Consensus 265 ~~~~~l~~~l~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~ 319 (977)
.+...+-..+.+++ +..+|.+||+|||+||.||||+++ |.++|+|||+++.+.
T Consensus 117 ~~~~~ik~~m~Qll~gl~~~H~~~IlHRDLKPQNlLi~~~--G~lKlaDFGlAra~~ 171 (323)
T KOG0594|consen 117 LPPRLIKSFMRQLLRGLAFLHSHGILHRDLKPQNLLISSS--GVLKLADFGLARAFS 171 (323)
T ss_pred CCHHHHHHHHHHHHHHHHHHHhCCeecccCCcceEEECCC--CcEeeeccchHHHhc
Confidence 55433333333333 677899999999999999999965 999999999998665
|
|
| >TIGR03724 arch_bud32 Kae1-associated kinase Bud32 | Back alignment and domain information |
|---|
Probab=99.43 E-value=2.2e-12 Score=134.69 Aligned_cols=139 Identities=22% Similarity=0.267 Sum_probs=96.3
Q ss_pred cccccccEEEEEEecCCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCcHHHHHHH
Q 002031 126 LATASIAQVHRATLVDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEAENT 205 (977)
Q Consensus 126 iasaSigqV~~A~l~~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea~n~ 205 (977)
||+|++|.||+|.. +|++|+||+..+.....-..|.. .+...+.+|.+++
T Consensus 2 ig~G~~~~vy~~~~-~~~~~viK~~~~~~~~~~~~~~~-----------------------------~~~~~~~~E~~~l 51 (199)
T TIGR03724 2 IAKGAEAIIYLGDF-LGLKAVIKERVPKSYRHPELDER-----------------------------IRRERTRNEARLL 51 (199)
T ss_pred CCCCceEEEEEeec-CCccEEEEEecCCcCcCchHHHH-----------------------------HHHHHHHHHHHHH
Confidence 78999999999985 78999999865432111000000 0001245677777
Q ss_pred HHHHHHhCCCCCCCCCCCCCCCCCCeEeceeee--cCCceEEeeccCCCCCCChHHHHhcCCCHHHHHHHHHHHHHHHHH
Q 002031 206 RIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ--SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAYAHQIY 283 (977)
Q Consensus 206 ~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~--~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~l~~i~ 283 (977)
..+.+ ..+.+|.++. ....+|||||++|.+|.+.... .. ..++..+... +..+|
T Consensus 52 ~~l~~------------------~~i~~p~~~~~~~~~~~lv~e~~~g~~l~~~~~~--~~---~~~~~~i~~~-l~~lH 107 (199)
T TIGR03724 52 SRARK------------------AGVNTPVVYDVDPDNKTIVMEYIEGKPLKDVIEE--GN---DELLREIGRL-VGKLH 107 (199)
T ss_pred HHHHH------------------CCCCCCEEEEEECCCCEEEEEEECCccHHHHHhh--cH---HHHHHHHHHH-HHHHH
Confidence 77654 2356777775 5566999999999998776321 11 1444444443 66899
Q ss_pred hcCccccCCCCCCeEEccCCCCceEEEecccccccCHH
Q 002031 284 VDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSSS 321 (977)
Q Consensus 284 ~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~~ 321 (977)
..|++|+|+||+||+++ + ++++++|||+++.....
T Consensus 108 ~~gi~H~Dl~~~Nil~~-~--~~~~liDfg~a~~~~~~ 142 (199)
T TIGR03724 108 KAGIVHGDLTTSNIIVR-D--DKLYLIDFGLGKYSDEI 142 (199)
T ss_pred HCCeecCCCCcceEEEE-C--CcEEEEECCCCcCCCcH
Confidence 99999999999999998 4 78999999998876543
|
Members of this protein family are the Bud32 protein associated with Kae1 (kinase-associated endopeptidase 1) in the Archaea. In many Archaeal genomes, Kae1 and Bud32 are fused. The complex is homologous to the Kae1 and Bud32 subunits of the eukaryotic KEOPS complex, an apparently ancient protein kinase-containing molecular machine. |
| >KOG0575 consensus Polo-like serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=99.43 E-value=8.9e-14 Score=158.72 Aligned_cols=138 Identities=18% Similarity=0.210 Sum_probs=98.2
Q ss_pred cccccccccEEEEEEe-cCCCEEEEEEec------CChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhccccc
Q 002031 124 TPLATASIAQVHRATL-VDGRQVVVKVQH------QGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKEL 196 (977)
Q Consensus 124 ~piasaSigqV~~A~l-~~G~~VAVKv~~------p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~El 196 (977)
+-||.|+||+||+++. .+|+.||+||.. ++..+.+..++++.+.+.+
T Consensus 24 ~~LGkGgFA~cYe~~~~~tge~~A~KvVpk~~l~k~~~reKv~~EIeIHr~L~H-------------------------- 77 (592)
T KOG0575|consen 24 RFLGKGGFARCYEARDLDTGEVVAVKVVPKKLLKKPKQREKVLNEIEIHRSLKH-------------------------- 77 (592)
T ss_pred eeeccCcceEEEEEEEcCCCcEEEEEEeehHHhcCcchHHHHHHHHHHHHhcCC--------------------------
Confidence 6799999999999997 789999999864 3333333333322221110
Q ss_pred CcHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeee-cCCceEEeeccCCCCCCChHHHHhcCCCHHHHHHHHH
Q 002031 197 DFNSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEIT 275 (977)
Q Consensus 197 d~~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~ 275 (977)
.|+ |.+=..++ +..-|||.|.|+-.+|.++.. ++..+...++...+.
T Consensus 78 ------pnI-------------------------V~f~~~FEDs~nVYivLELC~~~sL~el~K-rrk~ltEpEary~l~ 125 (592)
T KOG0575|consen 78 ------PNI-------------------------VQFYHFFEDSNNVYIVLELCHRGSLMELLK-RRKPLTEPEARYFLR 125 (592)
T ss_pred ------CcE-------------------------EeeeeEeecCCceEEEEEecCCccHHHHHH-hcCCCCcHHHHHHHH
Confidence 111 22222223 455579999999999988755 344566666666666
Q ss_pred HHH--HHHHHhcCccccCCCCCCeEEccCCCCceEEEecccccccCHH
Q 002031 276 RAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSSS 321 (977)
Q Consensus 276 ~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~~ 321 (977)
+++ +..+|.+||+|||+|-|||+++++ .+|+|.|||++..+..+
T Consensus 126 QIv~GlkYLH~~~IiHRDLKLGNlfL~~~--~~VKIgDFGLAt~le~~ 171 (592)
T KOG0575|consen 126 QIVEGLKYLHSLGIIHRDLKLGNLFLNEN--MNVKIGDFGLATQLEYD 171 (592)
T ss_pred HHHHHHHHHHhcCceecccchhheeecCc--CcEEecccceeeeecCc
Confidence 655 888999999999999999999965 89999999999999743
|
|
| >KOG0192 consensus Tyrosine kinase specific for activated (GTP-bound) p21cdc42Hs [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.42 E-value=6e-13 Score=150.40 Aligned_cols=141 Identities=18% Similarity=0.127 Sum_probs=104.6
Q ss_pred ccccccccEEEEEEecCCCE-EEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCcHHHHH
Q 002031 125 PLATASIAQVHRATLVDGRQ-VVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEAE 203 (977)
Q Consensus 125 piasaSigqV~~A~l~~G~~-VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea~ 203 (977)
-+|+|++|+||+|..+ |+. ||||+..+.-...-. +-+|++|+.
T Consensus 48 ~iG~G~~g~V~~~~~~-g~~~vavK~~~~~~~~~~~-----------------------------------~~~f~~E~~ 91 (362)
T KOG0192|consen 48 VLGSGSFGTVYKGKWR-GTDVVAVKIISDPDFDDES-----------------------------------RKAFRREAS 91 (362)
T ss_pred hcccCCceeEEEEEeC-CceeEEEEEecchhcChHH-----------------------------------HHHHHHHHH
Confidence 3999999999999985 566 999987653221100 225778888
Q ss_pred HHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeeecC--CceEEeeccCCCCCCChHHH-HhcCCCHHHHHHHHHHHH--
Q 002031 204 NTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQSS--ETVLILEFMDGIRLNDCESL-EAFGVNKQKVVEEITRAY-- 278 (977)
Q Consensus 204 n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~~~--~~vLVmE~i~G~~L~~~~~~-~~~~~~~~~l~~~l~~~~-- 278 (977)
-+.+++| ...|.+.-+.... ...|||||++|++|.++... ....++....+..+.++.
T Consensus 92 il~~l~H-----------------pNIV~f~G~~~~~~~~~~iVtEy~~~GsL~~~l~~~~~~~l~~~~~l~~aldiArG 154 (362)
T KOG0192|consen 92 LLSRLRH-----------------PNIVQFYGACTSPPGSLCIVTEYMPGGSLSVLLHKKRKRKLPLKVRLRIALDIARG 154 (362)
T ss_pred HHHhCCC-----------------CCeeeEEEEEcCCCCceEEEEEeCCCCcHHHHHhhcccCCCCHHHHHHHHHHHHHH
Confidence 8877654 1123333333222 35799999999999998654 245678888788777766
Q ss_pred HHHHHhcC-ccccCCCCCCeEEccCCCC-ceEEEecccccccCH
Q 002031 279 AHQIYVDG-FFNGDPHPGNFLVSKDPPH-RPILLDFGLTKKLSS 320 (977)
Q Consensus 279 l~~i~~~G-~~H~D~hPgNIlv~~~~~g-~i~LiDFG~~~~l~~ 320 (977)
++.+|..+ +||||+||.||||+.+ + .++|+|||+++....
T Consensus 155 m~YLH~~~~iIHrDLK~~NiLv~~~--~~~~KI~DFGlsr~~~~ 196 (362)
T KOG0192|consen 155 MEYLHSEGPIIHRDLKSDNILVDLK--GKTLKIADFGLSREKVI 196 (362)
T ss_pred HHHHhcCCCeeecccChhhEEEcCC--CCEEEECCCccceeecc
Confidence 88999999 9999999999999965 6 899999999977654
|
|
| >cd05146 RIO3_euk RIO kinase family; eukaryotic RIO3, catalytic domain | Back alignment and domain information |
|---|
Probab=99.40 E-value=1.7e-12 Score=133.83 Aligned_cols=175 Identities=14% Similarity=0.145 Sum_probs=112.5
Q ss_pred cccccccccEEEEEEecC-------CCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCC-------CCCchhHHHHh
Q 002031 124 TPLATASIAQVHRATLVD-------GRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQ-------YDFNPIIDEWC 189 (977)
Q Consensus 124 ~piasaSigqV~~A~l~~-------G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~-------~~~~~~~~e~~ 189 (977)
-+|++|--+-||.|...+ +..|||||-+.+.... + ....++.. .+. .+...++..+
T Consensus 3 g~i~~GKEa~V~~~~~~~~~~~~~~~~~~avKi~r~~~~~F-k-------~~~~y~~~-~~rf~~~~~k~~~~~~~~~w- 72 (197)
T cd05146 3 GCISTGKESVVLHANGGSNETEQVIPTECAIKVFKTTLNEF-K-------NRDKYIKD-DYRFKDRFSKLNPRKIIRMW- 72 (197)
T ss_pred CccccCcceEEEEEecCcccccccCCceEEEEEEeccceeE-c-------ChhhhccC-CcccccCcCCCCHHHHHHHH-
Confidence 368999999999998643 5899999988654321 1 00111100 000 1112222222
Q ss_pred hhcccccCcHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeeecCCceEEeeccCCCCCCChHHHHhcCCC---
Q 002031 190 KEAPKELDFNSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQSSETVLILEFMDGIRLNDCESLEAFGVN--- 266 (977)
Q Consensus 190 ~~l~~Eld~~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~~~~~vLVmE~i~G~~L~~~~~~~~~~~~--- 266 (977)
-.+|++++.+++.. ++.||+++...+++|||||+.|..+... .+.....+
T Consensus 73 --------a~kE~r~L~rl~~~------------------Gv~vP~pi~~~~~~lvME~Ig~~~~~~~-~Lkd~~~~~~~ 125 (197)
T cd05146 73 --------AEKEMHNLKRMQKA------------------GIPCPEVVVLKKHVLVMSFIGDDQVPAP-KLKDAKLNDEE 125 (197)
T ss_pred --------HHHHHHHHHHHHHc------------------CCCCCeEEEecCCEEEEEEcCCCCccch-hhhccccCHHH
Confidence 35799999998762 5889999999999999999987533211 12211222
Q ss_pred HHHHHHHHHHHHHHHHHhcCccccCCCCCCeEEccCCCCceEEEecccccccCHHHHHHHHHHHHHHHcCCHHHHHHHH
Q 002031 267 KQKVVEEITRAYAHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSSSMKQALAKMFFAAAEGDHVALLSAF 345 (977)
Q Consensus 267 ~~~l~~~l~~~~l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~~~r~~~~~l~~a~~~~d~~~~~~~~ 345 (977)
...+...++..+...+|..|++|+||+|.|||+.+ ++++|||||.+...+...-.. ++.+|.+.+.+.|
T Consensus 126 ~~~i~~~i~~~l~~l~H~~glVHGDLs~~NIL~~~---~~v~iIDF~qav~~~hp~a~~-------~l~RD~~ni~~fF 194 (197)
T cd05146 126 MKNAYYQVLSMMKQLYKECNLVHADLSEYNMLWHD---GKVWFIDVSQSVEPTHPHGLE-------FLFRDCRNVIQFF 194 (197)
T ss_pred HHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEEC---CcEEEEECCCceeCCCCCHHH-------HHHHHHHHHHHHh
Confidence 23344555555555568999999999999999962 689999999999887543322 2345655555554
|
The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO3 is present only in multicellular eukaryotes. Its function is still unknown. |
| >KOG0598 consensus Ribosomal protein S6 kinase and related proteins [General function prediction only; Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.40 E-value=7.2e-13 Score=143.62 Aligned_cols=143 Identities=20% Similarity=0.277 Sum_probs=94.8
Q ss_pred cccC-ccccccccccEEEEEEec-CCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhccccc
Q 002031 119 MDFV-ETPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKEL 196 (977)
Q Consensus 119 ~~~d-~~piasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~El 196 (977)
++|+ .+.||.||||+|+.++.+ +|+-+|+||++... + + +
T Consensus 25 ~dF~~lkviGkG~fGkV~~Vrk~dt~kiYAmKvl~K~~---i----------v----------------~---------- 65 (357)
T KOG0598|consen 25 DDFEILKVIGKGSFGKVFQVRKKDTGKIYAMKVLKKKK---I----------V----------------E---------- 65 (357)
T ss_pred hheeeeeeeeccCCceEEEEEEcccCceeehhhhhhhH---h----------h----------------h----------
Confidence 3444 378999999999999975 68999999875321 0 0 0
Q ss_pred CcHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeee---cCCceEEeeccCCCCCCChHHHHhcC-CCHHHHHH
Q 002031 197 DFNSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ---SSETVLILEFMDGIRLNDCESLEAFG-VNKQKVVE 272 (977)
Q Consensus 197 d~~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~---~~~~vLVmE~i~G~~L~~~~~~~~~~-~~~~~l~~ 272 (977)
..|.+++..=+..+.. ...++.|.-.|. ..+-+||+||+.|+.|--. ++..+ ++...+.-
T Consensus 66 --~~e~~~~~~Er~IL~~------------v~hPFiv~l~ysFQt~~kLylVld~~~GGeLf~h--L~~eg~F~E~~arf 129 (357)
T KOG0598|consen 66 --KKEVRHTKAERNILSK------------IKHPFIVKLIYSFQTEEKLYLVLDYLNGGELFYH--LQREGRFSEDRARF 129 (357)
T ss_pred --hhhHHHHHHHHHHHHh------------CCCCcEeeeEEecccCCeEEEEEeccCCccHHHH--HHhcCCcchhHHHH
Confidence 0122222222222210 122466666664 4667999999999888643 33222 33333333
Q ss_pred HHHHHH--HHHHHhcCccccCCCCCCeEEccCCCCceEEEeccccccc
Q 002031 273 EITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKL 318 (977)
Q Consensus 273 ~l~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l 318 (977)
.++++. +..+|+.||+|||+||+|||++.+ |.|+|.|||+++..
T Consensus 130 YlaEi~lAL~~LH~~gIiyRDlKPENILLd~~--GHi~LtDFgL~k~~ 175 (357)
T KOG0598|consen 130 YLAEIVLALGYLHSKGIIYRDLKPENILLDEQ--GHIKLTDFGLCKED 175 (357)
T ss_pred HHHHHHHHHHHHHhCCeeeccCCHHHeeecCC--CcEEEeccccchhc
Confidence 344433 889999999999999999999966 99999999999843
|
|
| >PRK12274 serine/threonine protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.39 E-value=2.9e-12 Score=132.47 Aligned_cols=159 Identities=16% Similarity=0.144 Sum_probs=106.1
Q ss_pred ccccccccccEEEEEEecCCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCcHHHH
Q 002031 123 ETPLATASIAQVHRATLVDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (977)
Q Consensus 123 ~~piasaSigqV~~A~l~~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea 202 (977)
.+.+++++||+||.+.. .+++|+.+-..-. -..++.++. . -+.+|+
T Consensus 7 ~~~l~~~~f~~v~~~~~-~~~k~~~~~l~~~--------~~~~~~~~~------------------------~-l~~rE~ 52 (218)
T PRK12274 7 NEPLKSDTFGRILLVRG-GERKFVRRDLSAA--------PWWLRGVAW------------------------W-LARREA 52 (218)
T ss_pred ceeecCCCcceEEEeec-CCceeeecccccc--------hhhhhhHHH------------------------H-HHHHHH
Confidence 36789999999998765 6778876632210 000010100 0 245688
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeeecCCceEEeeccCCCCCCChHHHHhcCCCHHHHHHHHHHHHHHHH
Q 002031 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQSSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAYAHQI 282 (977)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~l~~i 282 (977)
+.+.++.+ ...||.++.....+++|||++|.+|.+... . ....+...+.+ .++++
T Consensus 53 ~iL~~L~~-------------------~~~vP~ll~~~~~~lvmeyI~G~~L~~~~~--~---~~~~~~~qi~~-~L~~l 107 (218)
T PRK12274 53 LALRQLDG-------------------LPRTPRLLHWDGRHLDRSYLAGAAMYQRPP--R---GDLAYFRAARR-LLQQL 107 (218)
T ss_pred HHHHhcCC-------------------CCCCCEEEEEcCEEEEEeeecCccHHhhhh--h---hhHHHHHHHHH-HHHHH
Confidence 87777643 245788876567899999999998864321 1 11223333333 47789
Q ss_pred HhcCccccCC-CCCCeEEccCCCCceEEEecccccccCHHHHHHHHHHHHHHHcCCHHHHHHHHHH
Q 002031 283 YVDGFFNGDP-HPGNFLVSKDPPHRPILLDFGLTKKLSSSMKQALAKMFFAAAEGDHVALLSAFAE 347 (977)
Q Consensus 283 ~~~G~~H~D~-hPgNIlv~~~~~g~i~LiDFG~~~~l~~~~r~~~~~l~~a~~~~d~~~~~~~~~~ 347 (977)
|..|++|+|+ ||+|||++.+ ++++|||||++....+.-+ ...-+..+|...+.+.++.
T Consensus 108 H~~GIvHrDL~kp~NILv~~~--g~i~LIDFG~A~~~~~~~~-----~~r~L~~rDl~~llk~~~~ 166 (218)
T PRK12274 108 HRCGVAHNDLAKEANWLVQED--GSPAVIDFQLAVRGNPRAR-----WMRLLAREDLRHLLKHKRM 166 (218)
T ss_pred HHCcCccCCCCCcceEEEcCC--CCEEEEECCCceecCCcch-----HHHHHHHHHHHHHHHHHHh
Confidence 9999999999 7999999855 8899999999987664332 2222335888888888766
|
|
| >KOG0663 consensus Protein kinase PITSLRE and related kinases [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.39 E-value=5.1e-13 Score=142.03 Aligned_cols=143 Identities=15% Similarity=0.138 Sum_probs=97.2
Q ss_pred cccccccccEEEEEEe-cCCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCcHHHH
Q 002031 124 TPLATASIAQVHRATL-VDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (977)
Q Consensus 124 ~piasaSigqV~~A~l-~~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea 202 (977)
..|++|+||.||||++ ++++.||+|-.+++-++. .+. +-..+|.
T Consensus 82 nrI~EGtyGiVYRakdk~t~eIVALKr~kmekek~--------------------GFP---------------ItsLREI 126 (419)
T KOG0663|consen 82 NRIEEGTYGVVYRAKDKKTDEIVALKRLKMEKEKE--------------------GFP---------------ITSLREI 126 (419)
T ss_pred hhcccCcceeEEEeccCCcceeEEeeecccccccC--------------------CCc---------------chhHHHH
Confidence 4699999999999998 588999999776543211 111 1234455
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeee-c--CCceEEeeccCCCCCCChHHHHhcCCCHHHHHHHHHHHH-
Q 002031 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-S--SETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY- 278 (977)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~--~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~- 278 (977)
.-+.+++| ...|.|-+|.- + .+-+||||||+- .|..+...-...+...++--.+.+.+
T Consensus 127 niLl~~~H-----------------~NIV~vkEVVvG~~~d~iy~VMe~~Eh-DLksl~d~m~q~F~~~evK~L~~QlL~ 188 (419)
T KOG0663|consen 127 NILLKARH-----------------PNIVEVKEVVVGSNMDKIYIVMEYVEH-DLKSLMETMKQPFLPGEVKTLMLQLLR 188 (419)
T ss_pred HHHHhcCC-----------------CCeeeeEEEEeccccceeeeeHHHHHh-hHHHHHHhccCCCchHHHHHHHHHHHH
Confidence 55555443 23466667664 2 456899999982 22222111112344444444444544
Q ss_pred -HHHHHhcCccccCCCCCCeEEccCCCCceEEEecccccccCHH
Q 002031 279 -AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSSS 321 (977)
Q Consensus 279 -l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~~ 321 (977)
++.+|.+.|+|||+||.|+|++++ |.+++.|||+++.+...
T Consensus 189 glk~lH~~wilHRDLK~SNLLm~~~--G~lKiaDFGLAR~ygsp 230 (419)
T KOG0663|consen 189 GLKHLHDNWILHRDLKTSNLLLSHK--GILKIADFGLAREYGSP 230 (419)
T ss_pred HHHHHhhceeEecccchhheeeccC--CcEEecccchhhhhcCC
Confidence 888999999999999999999966 99999999999998765
|
|
| >KOG0592 consensus 3-phosphoinositide-dependent protein kinase (PDK1) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.39 E-value=1.1e-12 Score=147.45 Aligned_cols=142 Identities=26% Similarity=0.341 Sum_probs=95.3
Q ss_pred cccccccccEEEEEEe-cCCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCc-HHH
Q 002031 124 TPLATASIAQVHRATL-VDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDF-NSE 201 (977)
Q Consensus 124 ~piasaSigqV~~A~l-~~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~-~~E 201 (977)
+-||.|||++|++|+. .+++.+||||..... + ++| +-++| .+|
T Consensus 79 ~~lGeGSYStV~~A~~~~t~keYAiKVl~K~~-------------I----------------ike------~KvkYV~~E 123 (604)
T KOG0592|consen 79 KILGEGSYSTVVLAREKATGKEYAIKVLDKRY-------------I----------------IKE------KKVKYVTRE 123 (604)
T ss_pred heeccccceeEEEeeecCCCceeeHhhhhHHH-------------H----------------Hhh------cccchhhHH
Confidence 4699999999999997 479999999853210 0 000 11122 223
Q ss_pred HHHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeee----cCCceEEeeccCCCCCCChHHHHhcC-CCHH---HHHHH
Q 002031 202 AENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ----SSETVLILEFMDGIRLNDCESLEAFG-VNKQ---KVVEE 273 (977)
Q Consensus 202 a~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~----~~~~vLVmE~i~G~~L~~~~~~~~~~-~~~~---~l~~~ 273 (977)
-..+.++.+ ++ -|-++|. ....|.|+||.+++.|-++ +...| ++.. -.+..
T Consensus 124 k~~l~~L~~-----------------hP--givkLy~TFQD~~sLYFvLe~A~nGdll~~--i~K~Gsfde~caR~YAAe 182 (604)
T KOG0592|consen 124 KEALTQLSG-----------------HP--GIVKLYFTFQDEESLYFVLEYAPNGDLLDL--IKKYGSFDETCARFYAAE 182 (604)
T ss_pred HHHHHHhhC-----------------CC--CeEEEEEEeecccceEEEEEecCCCcHHHH--HHHhCcchHHHHHHHHHH
Confidence 334444432 22 2334443 5677999999999988766 33433 2211 12222
Q ss_pred HHHHHHHHHHhcCccccCCCCCCeEEccCCCCceEEEecccccccCHHHHH
Q 002031 274 ITRAYAHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSSSMKQ 324 (977)
Q Consensus 274 l~~~~l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~~~r~ 324 (977)
++. .++.||.+||||||+||+|||++.| |+|+|.|||.++.+++....
T Consensus 183 Ild-AleylH~~GIIHRDlKPENILLd~d--mhikITDFGsAK~l~~~~~~ 230 (604)
T KOG0592|consen 183 ILD-ALEYLHSNGIIHRDLKPENILLDKD--GHIKITDFGSAKILSPSQKS 230 (604)
T ss_pred HHH-HHHHHHhcCceeccCChhheeEcCC--CcEEEeeccccccCChhhcc
Confidence 222 2888999999999999999999966 99999999999999987654
|
|
| >KOG0616 consensus cAMP-dependent protein kinase catalytic subunit (PKA) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.38 E-value=2.9e-12 Score=134.53 Aligned_cols=145 Identities=19% Similarity=0.235 Sum_probs=94.2
Q ss_pred cccC-ccccccccccEEEEEEec-CCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhccccc
Q 002031 119 MDFV-ETPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKEL 196 (977)
Q Consensus 119 ~~~d-~~piasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~El 196 (977)
++|+ .+-+|.||||.||.++.+ +|...|+||+...- +--++.+.+
T Consensus 44 ~dfe~~~tlGtGSFGrV~LVr~k~~g~yYAmKvL~k~~-------vVklKQveH-------------------------- 90 (355)
T KOG0616|consen 44 QDFERLKTLGTGSFGRVHLVREKHSGNYYAMKVLDKQK-------VVKLKQVEH-------------------------- 90 (355)
T ss_pred hhhhheeeeccCccceEEEEEEccCCceeehhhcCHHH-------HHHHHHHHH--------------------------
Confidence 3444 368999999999999985 78999999874321 111111111
Q ss_pred CcHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeee----cCCceEEeeccCCCCCCChHHHHhc-CCCHHH--
Q 002031 197 DFNSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ----SSETVLILEFMDGIRLNDCESLEAF-GVNKQK-- 269 (977)
Q Consensus 197 d~~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~----~~~~vLVmE~i~G~~L~~~~~~~~~-~~~~~~-- 269 (977)
..+|-+-+.++.+ + .+-+.+. .+..+|||||++|+.|-.+. +.. .++...
T Consensus 91 -~~nEk~vL~~v~~-------------------P-Flv~l~~t~~d~~~lymvmeyv~GGElFS~L--rk~~rF~e~~ar 147 (355)
T KOG0616|consen 91 -THNEKRVLKAVSH-------------------P-FLVKLYGTFKDNSNLYMVMEYVPGGELFSYL--RKSGRFSEPHAR 147 (355)
T ss_pred -HhhHHHHHhhccC-------------------c-eeEEEEEeeccCCeEEEEEeccCCccHHHHH--HhcCCCCchhHH
Confidence 1123222222211 1 1222332 46678999999999987763 332 233222
Q ss_pred HHHHHHHHHHHHHHhcCccccCCCCCCeEEccCCCCceEEEecccccccCHH
Q 002031 270 VVEEITRAYAHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSSS 321 (977)
Q Consensus 270 l~~~l~~~~l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~~ 321 (977)
....-+-+.++.||..++++||+||+|||++.+ |.|+++|||.++.++..
T Consensus 148 FYAAeivlAleylH~~~iiYRDLKPENiLlD~~--G~iKitDFGFAK~v~~r 197 (355)
T KOG0616|consen 148 FYAAEIVLALEYLHSLDIIYRDLKPENLLLDQN--GHIKITDFGFAKRVSGR 197 (355)
T ss_pred HHHHHHHHHHHHHHhcCeeeccCChHHeeeccC--CcEEEEeccceEEecCc
Confidence 222222234889999999999999999999966 99999999999999764
|
|
| >KOG0583 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.37 E-value=2e-12 Score=147.36 Aligned_cols=147 Identities=17% Similarity=0.204 Sum_probs=96.6
Q ss_pred ccccccccccEEEEEEe-cCCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCcHHH
Q 002031 123 ETPLATASIAQVHRATL-VDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSE 201 (977)
Q Consensus 123 ~~piasaSigqV~~A~l-~~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~E 201 (977)
.+.||+|+||.|+.|+. .+|+.|||||........ + . ...... ..+|
T Consensus 22 ~~~lG~GsfgkV~~a~~~~t~~~vAiKii~~~~~~~---~-----------------~------~~~~~~------i~rE 69 (370)
T KOG0583|consen 22 GRTLGSGSFGKVKLAKHRLTGEKVAIKIIDRKKVSS---K-----------------S------QKLDEL------IKRE 69 (370)
T ss_pred eeeecCCCCeeEEEeeeccCCCeEEEEEechhcccc---c-----------------c------cccchh------hHHH
Confidence 36899999999999986 589999999865430000 0 0 000001 1145
Q ss_pred HHHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeee-cCCceEEeeccCCCCCCChHHHHhcCCCHHHHHHHHHHHH--
Q 002031 202 AENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY-- 278 (977)
Q Consensus 202 a~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~-- 278 (977)
..++++++.. ...+.+-+++. .+.-++||||+.|+.|-+.... ...+..........+++
T Consensus 70 i~~~~~~~~H----------------pnI~~l~ev~~t~~~~~ivmEy~~gGdL~~~i~~-~g~l~E~~ar~~F~Qlisa 132 (370)
T KOG0583|consen 70 ISILRRLRSH----------------PNIIRLLEVFATPTKIYIVMEYCSGGDLFDYIVN-KGRLKEDEARKYFRQLISA 132 (370)
T ss_pred HHHHHHhccC----------------CCEeEEEEEEecCCeEEEEEEecCCccHHHHHHH-cCCCChHHHHHHHHHHHHH
Confidence 5666666520 12345555665 5668999999999888776432 22233322222222222
Q ss_pred HHHHHhcCccccCCCCCCeEEccCCCCceEEEecccccccC
Q 002031 279 AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 319 (977)
Q Consensus 279 l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~ 319 (977)
+..+|..|++|||+||+|||++.++ ++++|+|||++....
T Consensus 133 v~y~H~~gi~HRDLK~ENilld~~~-~~~Kl~DFG~s~~~~ 172 (370)
T KOG0583|consen 133 VAYCHSRGIVHRDLKPENILLDGNE-GNLKLSDFGLSAISP 172 (370)
T ss_pred HHHHHhCCEeeCCCCHHHEEecCCC-CCEEEeccccccccC
Confidence 7788999999999999999999653 899999999998773
|
|
| >KOG0608 consensus Warts/lats-like serine threonine kinases [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=99.36 E-value=5.9e-13 Score=150.67 Aligned_cols=143 Identities=18% Similarity=0.321 Sum_probs=96.2
Q ss_pred cccccCccccccccccEEEEEEec-CCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccc
Q 002031 117 MFMDFVETPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKE 195 (977)
Q Consensus 117 ~f~~~d~~piasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~E 195 (977)
.|..| ++||-|.||.|..++-- +...+|+|.++. .|.- .+.-...+..|
T Consensus 630 mFvki--k~iGvGAFGeV~Lv~KvDT~~lYAmKTLrK-------aDVl---------------------~rnQvaHVKAE 679 (1034)
T KOG0608|consen 630 MFVKI--KTIGVGAFGEVCLVRKVDTRALYAMKTLRK-------ADVL---------------------MRNQVAHVKAE 679 (1034)
T ss_pred ceEEE--eeecccccceeEEEeecchhhHHHHhhhHH-------HHHH---------------------hhhhhhhhhhh
Confidence 55555 68999999999999853 344567775432 1211 11111122344
Q ss_pred cCcHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeee----cCCceEEeeccCCCCCCChHHHHhcCCCHHHHH
Q 002031 196 LDFNSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ----SSETVLILEFMDGIRLNDCESLEAFGVNKQKVV 271 (977)
Q Consensus 196 ld~~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~----~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~ 271 (977)
-|.+.||.| .++| ++|. ....|.|||||+|+.+-.+ +-..|+-.+.++
T Consensus 680 RDILAEADn-------------------------~WVV-rLyySFQDkdnLYFVMdYIPGGDmMSL--LIrmgIFeE~LA 731 (1034)
T KOG0608|consen 680 RDILAEADN-------------------------EWVV-RLYYSFQDKDNLYFVMDYIPGGDMMSL--LIRMGIFEEDLA 731 (1034)
T ss_pred hhhHhhcCC-------------------------cceE-EEEEEeccCCceEEEEeccCCccHHHH--HHHhccCHHHHH
Confidence 555555543 2333 4443 4567899999999988766 445666566655
Q ss_pred HHHHH---HHHHHHHhcCccccCCCCCCeEEccCCCCceEEEecccccccC
Q 002031 272 EEITR---AYAHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 319 (977)
Q Consensus 272 ~~l~~---~~l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~ 319 (977)
+--+. +.++.+|.-|||||||||.|||||.| |.|+|.|||+|.-+.
T Consensus 732 RFYIAEltcAiesVHkmGFIHRDiKPDNILIDrd--GHIKLTDFGLCTGfR 780 (1034)
T KOG0608|consen 732 RFYIAELTCAIESVHKMGFIHRDIKPDNILIDRD--GHIKLTDFGLCTGFR 780 (1034)
T ss_pred HHHHHHHHHHHHHHHhccceecccCccceEEccC--Cceeeeeccccccce
Confidence 54333 33788999999999999999999977 999999999998653
|
|
| >KOG0578 consensus p21-activated serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.36 E-value=4e-12 Score=144.24 Aligned_cols=176 Identities=18% Similarity=0.241 Sum_probs=117.0
Q ss_pred HHHHHHHhCCCC--CCHHHHHHHHHHHh-CCChhhcccccCccccccccccEEEEEEe-cCCCEEEEEEecC---Chhhh
Q 002031 85 SLLKQLQDSLPP--RPVQEVSQTIEREF-GESMGGMFMDFVETPLATASIAQVHRATL-VDGRQVVVKVQHQ---GIKTI 157 (977)
Q Consensus 85 ~~L~~Lqd~~p~--~~~~~v~~~l~~el-g~~~~~~f~~~d~~piasaSigqV~~A~l-~~G~~VAVKv~~p---~i~~~ 157 (977)
+...++.|+-.. ++-+++...+..-. ..++...|..|. -||.|+-|-||.|+. .+++.||||...- .-++.
T Consensus 239 ~~~~~~~d~~~~~~~~~~~~~~~l~~v~~~~dP~~~y~~~~--kigqgaSG~vy~A~~~~~~~~VaiK~m~l~~Q~~keL 316 (550)
T KOG0578|consen 239 QHKQQLSDSSAQSIVSKEEILAKLKRVVSQGDPRSKYTDFK--KIGQGATGGVYVARKISTKQEVAIKRMDLRKQPKKEL 316 (550)
T ss_pred hcccccCchhccccchHHHHHHHhheeccCCChhhhhcchh--hhccccccceeeeeeccCCceEEEEEEEeccCCchhh
Confidence 334444444322 33334444444322 234555666664 499999999999985 5889999996521 11222
Q ss_pred hHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCcHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceee
Q 002031 158 ILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVI 237 (977)
Q Consensus 158 ~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~ 237 (977)
+..++.+|+.. +-.|+.+|-+.|-.
T Consensus 317 ilnEi~Vm~~~--------------------------------~H~NiVnfl~Sylv----------------------- 341 (550)
T KOG0578|consen 317 LLNEILVMRDL--------------------------------HHPNIVNFLDSYLV----------------------- 341 (550)
T ss_pred hHHHHHHHHhc--------------------------------cchHHHHHHHHhcc-----------------------
Confidence 22222222211 11355555443310
Q ss_pred ecCCceEEeeccCCCCCCChHHHHhcCCCHHHHHHHHHHHH--HHHHHhcCccccCCCCCCeEEccCCCCceEEEecccc
Q 002031 238 QSSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLT 315 (977)
Q Consensus 238 ~~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~ 315 (977)
..+.+.||||++|++|.|+.. ...++..+++....+.+ ++.+|..||+|||||-.|||++.+ |.++|.|||+|
T Consensus 342 -~deLWVVMEym~ggsLTDvVt--~~~~~E~qIA~Icre~l~aL~fLH~~gIiHrDIKSDnILL~~~--g~vKltDFGFc 416 (550)
T KOG0578|consen 342 -GDELWVVMEYMEGGSLTDVVT--KTRMTEGQIAAICREILQGLKFLHARGIIHRDIKSDNILLTMD--GSVKLTDFGFC 416 (550)
T ss_pred -cceeEEEEeecCCCchhhhhh--cccccHHHHHHHHHHHHHHHHHHHhcceeeeccccceeEeccC--CcEEEeeeeee
Confidence 355689999999999999854 34466777777666665 889999999999999999999976 89999999999
Q ss_pred cccCHHH
Q 002031 316 KKLSSSM 322 (977)
Q Consensus 316 ~~l~~~~ 322 (977)
.+++++.
T Consensus 417 aqi~~~~ 423 (550)
T KOG0578|consen 417 AQISEEQ 423 (550)
T ss_pred ecccccc
Confidence 9998876
|
|
| >KOG0577 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.36 E-value=6.5e-13 Score=149.36 Aligned_cols=177 Identities=16% Similarity=0.184 Sum_probs=118.9
Q ss_pred CCChhhcccccCccccccccccEEEEEEe-cCCCEEEEEEe-cCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHH
Q 002031 111 GESMGGMFMDFVETPLATASIAQVHRATL-VDGRQVVVKVQ-HQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEW 188 (977)
Q Consensus 111 g~~~~~~f~~~d~~piasaSigqV~~A~l-~~G~~VAVKv~-~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~ 188 (977)
..+++++|.++ +-||-||||-||-|+. ++.+.||||-. +.|-. -.+.|
T Consensus 21 k~DPEklf~dL--rEIGHGSFGAVYfArd~~n~evVAIKKMsySGKQ----------------------------s~EKW 70 (948)
T KOG0577|consen 21 KDDPEKLFSDL--REIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQ----------------------------SNEKW 70 (948)
T ss_pred cCCHHHHHHHH--HHhcCCccceeEEeeccCccceeeeeeccccccc----------------------------cHHHH
Confidence 45778888765 4599999999999997 58889999954 22211 11122
Q ss_pred hhhcccccCcHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeee-cCCceEEeeccCCCCCCChHHHHhcCCCH
Q 002031 189 CKEAPKELDFNSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAFGVNK 267 (977)
Q Consensus 189 ~~~l~~Eld~~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLVmE~i~G~~L~~~~~~~~~~~~~ 267 (977)
. |...|.+-+..+++ +..+-.-..|. ....+||||||-| +-+|+......++..
T Consensus 71 q-------DIlKEVrFL~~l~H-----------------PntieYkgCyLre~TaWLVMEYClG-SAsDlleVhkKplqE 125 (948)
T KOG0577|consen 71 Q-------DILKEVRFLRQLRH-----------------PNTIEYKGCYLREHTAWLVMEYCLG-SASDLLEVHKKPLQE 125 (948)
T ss_pred H-------HHHHHHHHHHhccC-----------------CCcccccceeeccchHHHHHHHHhc-cHHHHHHHHhccchH
Confidence 2 23334444444432 11111122232 4667999999987 556776666666666
Q ss_pred HHHHHHHHHHH--HHHHHhcCccccCCCCCCeEEccCCCCceEEEecccccccCHHHH------HHHHHHHHHHHcCCHH
Q 002031 268 QKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSSSMK------QALAKMFFAAAEGDHV 339 (977)
Q Consensus 268 ~~l~~~l~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~~~r------~~~~~l~~a~~~~d~~ 339 (977)
-+|+.....++ +..+|.++.||||+|.||||+++. |.++|.|||.+...++... +.--.+++|.-.+.|+
T Consensus 126 vEIAAi~~gaL~gLaYLHS~~~IHRDiKAGNILLse~--g~VKLaDFGSAsi~~PAnsFvGTPywMAPEVILAMDEGqYd 203 (948)
T KOG0577|consen 126 VEIAAITHGALQGLAYLHSHNRIHRDIKAGNILLSEP--GLVKLADFGSASIMAPANSFVGTPYWMAPEVILAMDEGQYD 203 (948)
T ss_pred HHHHHHHHHHHHHHHHHHHhhHHhhhccccceEecCC--CeeeeccccchhhcCchhcccCCccccchhHheeccccccC
Confidence 67777666665 889999999999999999999965 9999999999887766431 1223566677777776
Q ss_pred HHHHH
Q 002031 340 ALLSA 344 (977)
Q Consensus 340 ~~~~~ 344 (977)
+=++.
T Consensus 204 gkvDv 208 (948)
T KOG0577|consen 204 GKVDV 208 (948)
T ss_pred Cccce
Confidence 65543
|
|
| >cd05600 STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.35 E-value=1.9e-12 Score=146.55 Aligned_cols=143 Identities=19% Similarity=0.203 Sum_probs=93.2
Q ss_pred cccccccccEEEEEEec-CCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCcHHHH
Q 002031 124 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (977)
Q Consensus 124 ~piasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea 202 (977)
+.||+|++|+||+|+.+ +|+.||||+.+...... ... .-.+.+|.
T Consensus 7 ~~ig~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~----~~~------------------------------~~~~~~e~ 52 (333)
T cd05600 7 TQVGQGGYGQVFLAKKKDTGEIVALKRMKKSLLFK----LNE------------------------------VRHVLTER 52 (333)
T ss_pred EEEeecCCeEEEEEEECCCCCEEEEEEEEHHHHhh----hhH------------------------------HHHHHHHH
Confidence 57999999999999985 68999999876432100 000 00123344
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeee-cCCceEEeeccCCCCCCChHHHHhcCCCHHHHHHHHHHHH--H
Q 002031 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--A 279 (977)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~--l 279 (977)
..+..+.+ ...+.+-..+. ....+|||||++|.+|.++... ...+....+...+.+++ +
T Consensus 53 ~~l~~~~h-----------------~~iv~~~~~~~~~~~~~lv~e~~~g~~L~~~l~~-~~~l~~~~~~~~~~qi~~~l 114 (333)
T cd05600 53 DILTTTKS-----------------EWLVKLLYAFQDDEYLYLAMEYVPGGDFRTLLNN-LGVLSEDHARFYMAEMFEAV 114 (333)
T ss_pred HHHHhCCC-----------------CCCccEEEEEEcCCEEEEEEeCCCCCCHHHHHHH-cCCCCHHHHHHHHHHHHHHH
Confidence 43333321 00111222222 4556899999999999877431 22344444444444433 7
Q ss_pred HHHHhcCccccCCCCCCeEEccCCCCceEEEecccccccCH
Q 002031 280 HQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 320 (977)
Q Consensus 280 ~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 320 (977)
..+|..|++|+|+||.|||++.+ +.++|+|||++.....
T Consensus 115 ~~lH~~~ivH~dlkp~Nil~~~~--~~~kL~Dfg~a~~~~~ 153 (333)
T cd05600 115 DALHELGYIHRDLKPENFLIDAS--GHIKLTDFGLSKGIVT 153 (333)
T ss_pred HHHHHCCccccCCCHHHEEECCC--CCEEEEeCcCCccccc
Confidence 78999999999999999999865 8999999999876643
|
Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis. |
| >cd05085 PTKc_Fer Catalytic domain of the Protein Tyrosine Kinase, Fer | Back alignment and domain information |
|---|
Probab=99.35 E-value=4.4e-12 Score=136.77 Aligned_cols=141 Identities=18% Similarity=0.195 Sum_probs=97.0
Q ss_pred cccccccccEEEEEEecCCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCcHHHHH
Q 002031 124 TPLATASIAQVHRATLVDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEAE 203 (977)
Q Consensus 124 ~piasaSigqV~~A~l~~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea~ 203 (977)
+.||.|++|.||+|..++++.||+|+.+........ .++.+|+.
T Consensus 1 ~~ig~g~~g~vy~~~~~~~~~~a~K~~~~~~~~~~~------------------------------------~~~~~e~~ 44 (250)
T cd05085 1 ELLGKGNFGEVFKGTLKDKTPVAVKTCKEDLPQELK------------------------------------IKFLSEAR 44 (250)
T ss_pred CccCCCCCceEEEEEecCCcEEEEEecCCcCCHHHH------------------------------------HHHHHHHH
Confidence 368999999999999888999999987654432111 12445555
Q ss_pred HHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeee-cCCceEEeeccCCCCCCChHHHHhcCCCHHHHHHHHHHHH--HH
Q 002031 204 NTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--AH 280 (977)
Q Consensus 204 n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~--l~ 280 (977)
.+.++.+ ..-+.+...+. ....++||||++|.+|.+.........+...+...+.++. +.
T Consensus 45 ~l~~l~h-----------------~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~ 107 (250)
T cd05085 45 ILKQYDH-----------------PNIVKLIGVCTQRQPIYIVMELVPGGDFLSFLRKKKDELKTKQLVKFALDAAAGMA 107 (250)
T ss_pred HHHhCCC-----------------CCcCeEEEEEecCCccEEEEECCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHH
Confidence 5544421 00111222222 4567899999999999876433233345555555555544 77
Q ss_pred HHHhcCccccCCCCCCeEEccCCCCceEEEecccccccC
Q 002031 281 QIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 319 (977)
Q Consensus 281 ~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~ 319 (977)
.+|..|++|+|+||+||+++.+ +.++|+|||++....
T Consensus 108 ~lH~~~~~H~dl~p~nili~~~--~~~~l~d~g~~~~~~ 144 (250)
T cd05085 108 YLESKNCIHRDLAARNCLVGEN--NVLKISDFGMSRQED 144 (250)
T ss_pred HHHhCCeeecccChheEEEcCC--CeEEECCCccceecc
Confidence 8899999999999999999865 889999999986543
|
Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-c |
| >cd05628 STKc_NDR1 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 1 | Back alignment and domain information |
|---|
Probab=99.34 E-value=3.4e-12 Score=146.27 Aligned_cols=141 Identities=16% Similarity=0.207 Sum_probs=94.0
Q ss_pred cccccccccEEEEEEec-CCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCcHHHH
Q 002031 124 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (977)
Q Consensus 124 ~piasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea 202 (977)
+.||.|++|.||+|+.+ +|+.||||+.+..... ..+ ... .+..|.
T Consensus 7 ~~LG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~--~~~--------------------------~~~------~~~~E~ 52 (363)
T cd05628 7 KVIGRGAFGEVRLVQKKDTGHVYAMKILRKADML--EKE--------------------------QVG------HIRAER 52 (363)
T ss_pred EEEEeCCCEEEEEEEECCCCCEEEEEEEEHHHHH--Hhh--------------------------HHH------HHHHHH
Confidence 57999999999999874 7899999987532100 000 000 122333
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeee----cCCceEEeeccCCCCCCChHHHHhcCCCHHHHHHHHHHHH
Q 002031 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ----SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY 278 (977)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~----~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~ 278 (977)
..+.++.+ ..|++.+. ....+|||||++|.+|.+... ....++...+...+.+++
T Consensus 53 ~il~~~~~--------------------~~iv~~~~~~~~~~~~~lv~E~~~gg~L~~~l~-~~~~l~~~~~~~~~~qi~ 111 (363)
T cd05628 53 DILVEADS--------------------LWVVKMFYSFQDKLNLYLIMEFLPGGDMMTLLM-KKDTLTEEETQFYIAETV 111 (363)
T ss_pred HHHHhCCC--------------------CCcceEEEEEecCCeEEEEEcCCCCCcHHHHHH-hcCCCCHHHHHHHHHHHH
Confidence 33332211 12333332 345689999999999877643 223455555555444444
Q ss_pred --HHHHHhcCccccCCCCCCeEEccCCCCceEEEecccccccCHH
Q 002031 279 --AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSSS 321 (977)
Q Consensus 279 --l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~~ 321 (977)
+..+|..|++|||+||.|||++.+ +.++|+|||+++.+...
T Consensus 112 ~aL~~lH~~givHrDlKp~NILi~~~--~~vkL~DFGla~~~~~~ 154 (363)
T cd05628 112 LAIDSIHQLGFIHRDIKPDNLLLDSK--GHVKLSDFGLCTGLKKA 154 (363)
T ss_pred HHHHHHHhCCeEecCCCHHHeEECCC--CCEEEeeccCccccccc
Confidence 788999999999999999999865 89999999999877543
|
Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. NDR1 is highly expressed in thymus, mus |
| >cd05571 STKc_PKB Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B | Back alignment and domain information |
|---|
Probab=99.34 E-value=4e-12 Score=143.31 Aligned_cols=139 Identities=14% Similarity=0.110 Sum_probs=90.0
Q ss_pred ccccccccEEEEEEe-cCCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCcHHHHH
Q 002031 125 PLATASIAQVHRATL-VDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEAE 203 (977)
Q Consensus 125 piasaSigqV~~A~l-~~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea~ 203 (977)
.||.|++|.||+|+. .+|+.||||+.+...... ..+. ..+.+|.+
T Consensus 2 ~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~-~~~~---------------------------------~~~~~e~~ 47 (323)
T cd05571 2 LLGKGTFGKVILVREKATGKYYAMKILKKEVIIA-KDEV---------------------------------AHTLTESR 47 (323)
T ss_pred eeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhh-hHHH---------------------------------HHHHHHHH
Confidence 589999999999997 479999999876421100 0000 01223444
Q ss_pred HHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeee-cCCceEEeeccCCCCCCChHHHHhcCCCHHHHHHHHHHHH--HH
Q 002031 204 NTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--AH 280 (977)
Q Consensus 204 n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~--l~ 280 (977)
.+.++.+ ...+.+-..+. ....+|||||++|.+|.+... ....+....+...+.+++ +.
T Consensus 48 ~l~~l~h-----------------p~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~-~~~~~~~~~~~~~~~qi~~~L~ 109 (323)
T cd05571 48 VLQNTRH-----------------PFLTALKYSFQTHDRLCFVMEYANGGELFFHLS-RERVFSEDRARFYGAEIVSALG 109 (323)
T ss_pred HHHhCCC-----------------CCCCCEEEEEEcCCEEEEEEeCCCCCcHHHHHH-HcCCCCHHHHHHHHHHHHHHHH
Confidence 4433321 00111222222 455689999999999866532 222344444444444443 78
Q ss_pred HHHhcCccccCCCCCCeEEccCCCCceEEEecccccc
Q 002031 281 QIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKK 317 (977)
Q Consensus 281 ~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~ 317 (977)
.+|..|++|||+||.|||++.+ +.++|+|||++..
T Consensus 110 ~lH~~~ivHrDlkp~NIll~~~--~~~kl~DfG~a~~ 144 (323)
T cd05571 110 YLHSCDVVYRDLKLENLMLDKD--GHIKITDFGLCKE 144 (323)
T ss_pred HHHhCCeEeCCCCHHHEEECCC--CCEEEeeCCCCcc
Confidence 8999999999999999999865 8999999999865
|
Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having be |
| >cd05626 STKc_LATS2 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 2 | Back alignment and domain information |
|---|
Probab=99.33 E-value=3.2e-12 Score=147.59 Aligned_cols=139 Identities=14% Similarity=0.114 Sum_probs=90.9
Q ss_pred cccccccccEEEEEEe-cCCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCcHHHH
Q 002031 124 TPLATASIAQVHRATL-VDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (977)
Q Consensus 124 ~piasaSigqV~~A~l-~~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea 202 (977)
+.||.|++|+||+|+. .+|+.||||+.+.... .. .+. .-.+.+|.
T Consensus 7 ~~LG~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~--~~--------------------------~~~------~~~~~~E~ 52 (381)
T cd05626 7 KTLGIGAFGEVCLACKVDTHALYAMKTLRKKDV--LN--------------------------RNQ------VAHVKAER 52 (381)
T ss_pred EEEeecCCEEEEEEEECCCCCEEEEEEEEHHHh--hh--------------------------hHH------HHHHHHHH
Confidence 5699999999999987 4789999998753110 00 000 00233444
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeee----cCCceEEeeccCCCCCCChHHHHhcCCCHHHHHHHHHHHH
Q 002031 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ----SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY 278 (977)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~----~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~ 278 (977)
..+.++.+ -.|++++. ....+|||||++|++|.++.. ....++...+...+.+++
T Consensus 53 ~il~~l~h--------------------~~iv~l~~~~~~~~~~~lv~E~~~gg~L~~~l~-~~~~~~e~~~~~~~~qi~ 111 (381)
T cd05626 53 DILAEADN--------------------EWVVKLYYSFQDKDNLYFVMDYIPGGDMMSLLI-RMEVFPEVLARFYIAELT 111 (381)
T ss_pred HHHHhcCC--------------------CCeeeeEEEEecCCEEEEEEecCCCCcHHHHHH-hcCCCCHHHHHHHHHHHH
Confidence 44433321 12333332 455789999999999877642 122234333333333332
Q ss_pred --HHHHHhcCccccCCCCCCeEEccCCCCceEEEecccccccC
Q 002031 279 --AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 319 (977)
Q Consensus 279 --l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~ 319 (977)
+..+|..|++|||+||.|||++.+ ++++|+|||++..+.
T Consensus 112 ~aL~~LH~~givHrDlKp~Nili~~~--~~~kL~DFGl~~~~~ 152 (381)
T cd05626 112 LAIESVHKMGFIHRDIKPDNILIDLD--GHIKLTDFGLCTGFR 152 (381)
T ss_pred HHHHHHHhCCeeecCCcHHHEEECCC--CCEEEeeCcCCcccc
Confidence 788999999999999999999865 899999999987664
|
Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. LATS2 is an essential mitotic regulator responsible for coordinating accurate cytokinesis completion and governing the stabilization of other mitotic regulators. It is also critical in the maintenance of proper chromosome number, genomic stability, mitotic fidelity, and the integrity of centrosome duplication. Downregulation of LATS2 is associated with po |
| >cd05627 STKc_NDR2 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 2 | Back alignment and domain information |
|---|
Probab=99.33 E-value=4.5e-12 Score=145.08 Aligned_cols=140 Identities=17% Similarity=0.236 Sum_probs=92.8
Q ss_pred cccccccccEEEEEEec-CCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCcHHHH
Q 002031 124 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (977)
Q Consensus 124 ~piasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea 202 (977)
+.||+|++|+||+|+.+ +|+.||||+.+.... ...+ . .. .+..|.
T Consensus 7 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~--~~~~--~--------------------~~----------~~~~e~ 52 (360)
T cd05627 7 KVIGRGAFGEVRLVQKKDTGHIYAMKILRKADM--LEKE--Q--------------------VA----------HIRAER 52 (360)
T ss_pred EEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHH--hhhh--h--------------------HH----------HHHHHH
Confidence 67999999999999975 799999998763210 0000 0 00 122333
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceee---e-cCCceEEeeccCCCCCCChHHHHhcCCCHHHHHHHHHHHH
Q 002031 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVI---Q-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY 278 (977)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~---~-~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~ 278 (977)
..+..+.+ ..+++++ . ....+|||||++|.+|.+... ....++...+...+.+++
T Consensus 53 ~~l~~l~~--------------------~~iv~~~~~~~~~~~~~lv~E~~~gg~L~~~l~-~~~~l~~~~~~~~~~qi~ 111 (360)
T cd05627 53 DILVEADG--------------------AWVVKMFYSFQDKRNLYLIMEFLPGGDMMTLLM-KKDTLSEEATQFYIAETV 111 (360)
T ss_pred HHHHhCCC--------------------CCEeeEEEEEEcCCEEEEEEeCCCCccHHHHHH-hcCCCCHHHHHHHHHHHH
Confidence 33333211 1223333 2 355689999999999887643 223345444444444433
Q ss_pred --HHHHHhcCccccCCCCCCeEEccCCCCceEEEecccccccCH
Q 002031 279 --AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 320 (977)
Q Consensus 279 --l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 320 (977)
+..+|..|++|||+||+|||++.+ +.++|+|||++..+..
T Consensus 112 ~~L~~lH~~givHrDLkp~NIli~~~--~~vkL~DfG~~~~~~~ 153 (360)
T cd05627 112 LAIDAIHQLGFIHRDIKPDNLLLDAK--GHVKLSDFGLCTGLKK 153 (360)
T ss_pred HHHHHHHHCCeEccCCCHHHEEECCC--CCEEEeeccCCccccc
Confidence 788999999999999999999865 8999999999887654
|
Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. In addition, NDR2 plays a role in regul |
| >cd05593 STKc_PKB_gamma Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma | Back alignment and domain information |
|---|
Probab=99.33 E-value=4.7e-12 Score=143.08 Aligned_cols=140 Identities=14% Similarity=0.105 Sum_probs=90.9
Q ss_pred ccccccccEEEEEEec-CCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCcHHHHH
Q 002031 125 PLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEAE 203 (977)
Q Consensus 125 piasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea~ 203 (977)
.||+|++|+||+|+.+ +|+.||||+.++..... ..+ ...+.+|.+
T Consensus 2 ~lG~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~-~~~---------------------------------~~~~~~E~~ 47 (328)
T cd05593 2 LLGKGTFGKVILVREKASGKYYAMKILKKEVIIA-KDE---------------------------------VAHTLTESR 47 (328)
T ss_pred eeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhh-hhH---------------------------------HHHHHHHHH
Confidence 5899999999999974 79999999986432100 000 002233444
Q ss_pred HHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeee-cCCceEEeeccCCCCCCChHHHHhcCCCHHHHHHHHHHHH--HH
Q 002031 204 NTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--AH 280 (977)
Q Consensus 204 n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~--l~ 280 (977)
.+..+.+ ..-+.+-..+. ....+|||||++|.+|.+... ....++...+...+.+++ +.
T Consensus 48 ~l~~l~h-----------------p~iv~~~~~~~~~~~~~lv~Ey~~~g~L~~~l~-~~~~l~~~~~~~~~~qi~~aL~ 109 (328)
T cd05593 48 VLKNTRH-----------------PFLTSLKYSFQTKDRLCFVMEYVNGGELFFHLS-RERVFSEDRTRFYGAEIVSALD 109 (328)
T ss_pred HHHhCCC-----------------CCCcceEEEEEcCCEEEEEEeCCCCCCHHHHHH-hcCCCCHHHHHHHHHHHHHHHH
Confidence 4433321 00111112222 455689999999998865532 222345555444444443 78
Q ss_pred HHHhcCccccCCCCCCeEEccCCCCceEEEeccccccc
Q 002031 281 QIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKL 318 (977)
Q Consensus 281 ~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l 318 (977)
.+|..|++|||+||.|||++.+ +.++|+|||++...
T Consensus 110 ~LH~~~ivHrDikp~NIll~~~--~~~kL~DfG~~~~~ 145 (328)
T cd05593 110 YLHSGKIVYRDLKLENLMLDKD--GHIKITDFGLCKEG 145 (328)
T ss_pred HHHhCCeEecccCHHHeEECCC--CcEEEecCcCCccC
Confidence 8999999999999999999865 89999999998753
|
Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulate |
| >cd05614 STKc_MSK2_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 2 | Back alignment and domain information |
|---|
Probab=99.33 E-value=4.1e-12 Score=143.65 Aligned_cols=77 Identities=19% Similarity=0.248 Sum_probs=58.7
Q ss_pred cCCceEEeeccCCCCCCChHHHHhcCCCHHHHHHHHHHHH--HHHHHhcCccccCCCCCCeEEccCCCCceEEEeccccc
Q 002031 239 SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTK 316 (977)
Q Consensus 239 ~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~ 316 (977)
....++||||++|.+|.+... ....+....+...+.+++ +..+|..|++|||+||.|||++.+ +.++|+|||++.
T Consensus 77 ~~~~~lv~e~~~~g~L~~~l~-~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivHrDlkp~Nili~~~--~~~kl~DfG~~~ 153 (332)
T cd05614 77 EAKLHLILDYVSGGEMFTHLY-QRDNFSEDEVRFYSGEIILALEHLHKLGIVYRDIKLENILLDSE--GHVVLTDFGLSK 153 (332)
T ss_pred CCEEEEEEeCCCCCcHHHHHH-HcCCCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCHHHeEECCC--CCEEEeeCcCCc
Confidence 345689999999998876532 223355555544444443 788999999999999999999865 899999999987
Q ss_pred cc
Q 002031 317 KL 318 (977)
Q Consensus 317 ~l 318 (977)
.+
T Consensus 154 ~~ 155 (332)
T cd05614 154 EF 155 (332)
T ss_pred cc
Confidence 65
|
Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK2, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph |
| >cd05631 STKc_GRK4 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 4 | Back alignment and domain information |
|---|
Probab=99.32 E-value=6.6e-12 Score=138.77 Aligned_cols=143 Identities=15% Similarity=0.135 Sum_probs=95.7
Q ss_pred cccccccccEEEEEEe-cCCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCcHHHH
Q 002031 124 TPLATASIAQVHRATL-VDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (977)
Q Consensus 124 ~piasaSigqV~~A~l-~~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea 202 (977)
+.||+|++|.||+|.. .+|+.||||+.......... .+..+.+|.
T Consensus 6 ~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~----------------------------------~~~~~~~E~ 51 (285)
T cd05631 6 RVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRK----------------------------------GEAMALNEK 51 (285)
T ss_pred EEEecCCCEEEEEEEEecCCceEEEEEeeHhhhhhhh----------------------------------hHHHHHHHH
Confidence 5699999999999997 58999999986543211000 111234455
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeee-cCCceEEeeccCCCCCCChHHHH-hcCCCHHHHHHHHHHHH--
Q 002031 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLE-AFGVNKQKVVEEITRAY-- 278 (977)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLVmE~i~G~~L~~~~~~~-~~~~~~~~l~~~l~~~~-- 278 (977)
+.+.++.+ ...+.+...+. ....++||||++|.+|.+..... ...++...+...+.+++
T Consensus 52 ~il~~l~~-----------------~~iv~~~~~~~~~~~~~lv~e~~~~g~L~~~~~~~~~~~~~~~~~~~~~~qi~~~ 114 (285)
T cd05631 52 RILEKVNS-----------------RFVVSLAYAYETKDALCLVLTIMNGGDLKFHIYNMGNPGFDEQRAIFYAAELCCG 114 (285)
T ss_pred HHHHhcCC-----------------CcEEEEEEEEccCCeEEEEEEecCCCcHHHHHHhhCCCCCCHHHHHHHHHHHHHH
Confidence 55554422 11122223332 45568999999999987653221 12355555555554544
Q ss_pred HHHHHhcCccccCCCCCCeEEccCCCCceEEEecccccccC
Q 002031 279 AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 319 (977)
Q Consensus 279 l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~ 319 (977)
+..+|..|++|+|+||.|||++.+ +.++|+|||++..++
T Consensus 115 l~~lH~~~iiH~dikp~Nill~~~--~~~kl~Dfg~~~~~~ 153 (285)
T cd05631 115 LEDLQRERIVYRDLKPENILLDDR--GHIRISDLGLAVQIP 153 (285)
T ss_pred HHHHHhCCEEeCCCCHHHEEECCC--CCEEEeeCCCcEEcC
Confidence 778999999999999999999865 889999999988764
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK4 has a limited tissue distribution. It is mainly found i |
| >PLN00034 mitogen-activated protein kinase kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.32 E-value=6.5e-12 Score=143.38 Aligned_cols=136 Identities=20% Similarity=0.262 Sum_probs=90.0
Q ss_pred cccccccccEEEEEEec-CCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCcHHHH
Q 002031 124 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (977)
Q Consensus 124 ~piasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea 202 (977)
+.||.|++|.||+|+.+ +|+.||||+........... .+.+|+
T Consensus 80 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~------------------------------------~~~~E~ 123 (353)
T PLN00034 80 NRIGSGAGGTVYKVIHRPTGRLYALKVIYGNHEDTVRR------------------------------------QICREI 123 (353)
T ss_pred hhccCCCCeEEEEEEECCCCCEEEEEEEecCCcHHHHH------------------------------------HHHHHH
Confidence 57999999999999974 79999999976442211110 123454
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeee-cCCceEEeeccCCCCCCChHHHHhcCCCHHHHHHHHHHHH--H
Q 002031 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--A 279 (977)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~--l 279 (977)
+.+.++.+ ..-+.+-.++. ....++||||++|.+|.+... .+...+...+.+++ +
T Consensus 124 ~~l~~l~h-----------------~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~-----~~~~~~~~i~~qi~~aL 181 (353)
T PLN00034 124 EILRDVNH-----------------PNVVKCHDMFDHNGEIQVLLEFMDGGSLEGTHI-----ADEQFLADVARQILSGI 181 (353)
T ss_pred HHHHhCCC-----------------CCcceeeeEeccCCeEEEEEecCCCCccccccc-----CCHHHHHHHHHHHHHHH
Confidence 54444322 01122222222 455689999999998865321 12222233333332 7
Q ss_pred HHHHhcCccccCCCCCCeEEccCCCCceEEEecccccccC
Q 002031 280 HQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 319 (977)
Q Consensus 280 ~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~ 319 (977)
..+|..|++|+|+||.|||++.+ +.++|+|||++..+.
T Consensus 182 ~~LH~~~ivHrDlkp~NIll~~~--~~~kL~DfG~~~~~~ 219 (353)
T PLN00034 182 AYLHRRHIVHRDIKPSNLLINSA--KNVKIADFGVSRILA 219 (353)
T ss_pred HHHHHCCEeecCCCHHHEEEcCC--CCEEEcccccceecc
Confidence 78999999999999999999865 899999999987664
|
|
| >cd05084 PTKc_Fes Catalytic domain of the Protein Tyrosine Kinase, Fes | Back alignment and domain information |
|---|
Probab=99.32 E-value=8.4e-12 Score=134.85 Aligned_cols=141 Identities=16% Similarity=0.189 Sum_probs=93.7
Q ss_pred cccccccccEEEEEEec-CCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCcHHHH
Q 002031 124 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (977)
Q Consensus 124 ~piasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea 202 (977)
+.||.|++|+||+|+++ +|+.||||+.+........ -++.+|.
T Consensus 1 ~~lg~g~~g~vy~~~~~~~~~~~a~k~~~~~~~~~~~------------------------------------~~~~~e~ 44 (252)
T cd05084 1 ERIGRGNFGEVFSGRLRADNTPVAVKSCRETLPPDLK------------------------------------AKFLQEA 44 (252)
T ss_pred CccCcccCccEEEEEEecCCceEEEEecCccCCHHHH------------------------------------HHHHHHH
Confidence 36899999999999984 7999999986543321111 0233444
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeee-cCCceEEeeccCCCCCCChHHHHhcCCCHHHHHHHHHHHH--H
Q 002031 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--A 279 (977)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~--l 279 (977)
+.+.++.+ ...+.+-.++. ....+|||||++|.+|.++........+...+...+.++. +
T Consensus 45 ~~l~~l~h-----------------~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~qi~~~L 107 (252)
T cd05084 45 RILKQYSH-----------------PNIVRLIGVCTQKQPIYIVMELVQGGDFLTFLRTEGPRLKVKELIQMVENAAAGM 107 (252)
T ss_pred HHHHhCCC-----------------CCcceEEEEEcCCCCeEEEEeeccCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHH
Confidence 44443321 00111112222 4557899999999998876432222345555555444444 6
Q ss_pred HHHHhcCccccCCCCCCeEEccCCCCceEEEecccccccC
Q 002031 280 HQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 319 (977)
Q Consensus 280 ~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~ 319 (977)
..+|..|++|+|+||+||+++.+ +.++|+|||++..+.
T Consensus 108 ~~lH~~~i~H~dl~p~nil~~~~--~~~kl~dfg~~~~~~ 145 (252)
T cd05084 108 EYLESKHCIHRDLAARNCLVTEK--NVLKISDFGMSREEE 145 (252)
T ss_pred HHHHhCCccccccchheEEEcCC--CcEEECccccCcccc
Confidence 78899999999999999999855 889999999987654
|
Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular |
| >cd05587 STKc_cPKC Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C | Back alignment and domain information |
|---|
Probab=99.32 E-value=5.2e-12 Score=142.38 Aligned_cols=138 Identities=14% Similarity=0.146 Sum_probs=90.6
Q ss_pred cccccccccEEEEEEec-CCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCcHHHH
Q 002031 124 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (977)
Q Consensus 124 ~piasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea 202 (977)
+.||+|++|.||+|+.+ +++.||||+.+...... ..+.. .+..|.
T Consensus 6 ~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~-~~~~~---------------------------------~~~~e~ 51 (324)
T cd05587 6 MVLGKGSFGKVMLAERKGTDELYAIKILKKDVIIQ-DDDVE---------------------------------CTMVEK 51 (324)
T ss_pred EEEeeccCeEEEEEEECCCCCEEEEEEEEHHHhhh-hhHHH---------------------------------HHHHHH
Confidence 57999999999999975 68899999976532100 00000 122343
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceee---e-cCCceEEeeccCCCCCCChHHHHhcCCCHHHHHHHHHHHH
Q 002031 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVI---Q-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY 278 (977)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~---~-~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~ 278 (977)
+.+..+.+ .-.|+.++ . ....++||||++|.+|.+... ....+....+...+.+++
T Consensus 52 ~~l~~~~~-------------------~~~i~~~~~~~~~~~~~~lv~E~~~~g~L~~~~~-~~~~~~~~~~~~~~~qi~ 111 (324)
T cd05587 52 RVLALPGK-------------------PPFLTQLHSCFQTMDRLYFVMEYVNGGDLMYHIQ-QVGKFKEPHAVFYAAEIA 111 (324)
T ss_pred HHHHhcCC-------------------CCceeeeEEEEEcCCEEEEEEcCCCCCcHHHHHH-HcCCCCHHHHHHHHHHHH
Confidence 33333211 11233332 2 355689999999999876532 122344444444444443
Q ss_pred --HHHHHhcCccccCCCCCCeEEccCCCCceEEEecccccc
Q 002031 279 --AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKK 317 (977)
Q Consensus 279 --l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~ 317 (977)
+..+|..|++|+|+||.|||++.+ +.++|+|||++..
T Consensus 112 ~al~~lH~~~ivH~dlkp~Nill~~~--~~~kL~Dfg~~~~ 150 (324)
T cd05587 112 IGLFFLHSKGIIYRDLKLDNVMLDAE--GHIKIADFGMCKE 150 (324)
T ss_pred HHHHHHHHCCeEecCCCHHHeEEcCC--CCEEEeecCccee
Confidence 788999999999999999999865 8999999999764
|
Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory |
| >KOG0193 consensus Serine/threonine protein kinase RAF [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.32 E-value=3e-12 Score=145.66 Aligned_cols=149 Identities=13% Similarity=0.148 Sum_probs=102.3
Q ss_pred hhhcccccC-ccccccccccEEEEEEecCCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhc
Q 002031 114 MGGMFMDFV-ETPLATASIAQVHRATLVDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEA 192 (977)
Q Consensus 114 ~~~~f~~~d-~~piasaSigqV~~A~l~~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l 192 (977)
|+..++++. .++||+||||.||||+.+. +||||++.-.-...- . ++
T Consensus 387 WeIp~~ev~l~~rIGsGsFGtV~Rg~whG--dVAVK~Lnv~~pt~~--q-----------------------lq------ 433 (678)
T KOG0193|consen 387 WEIPPEEVLLGERIGSGSFGTVYRGRWHG--DVAVKLLNVDDPTPE--Q-----------------------LQ------ 433 (678)
T ss_pred cccCHHHhhccceeccccccceeeccccc--ceEEEEEecCCCCHH--H-----------------------HH------
Confidence 444444333 3799999999999999863 799998753221100 0 01
Q ss_pred ccccCcHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeeecCCceEEeeccCCCCCCChHHHHhcCCCHHHHHH
Q 002031 193 PKELDFNSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQSSETVLILEFMDGIRLNDCESLEAFGVNKQKVVE 272 (977)
Q Consensus 193 ~~Eld~~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~ 272 (977)
-|++|..++++-|+.- .+-+=-........+|+.||+|-+|.......+..++..++..
T Consensus 434 ----aFKnEVa~lkkTRH~N-----------------IlLFMG~~~~p~~AIiTqwCeGsSLY~hlHv~etkfdm~~~id 492 (678)
T KOG0193|consen 434 ----AFKNEVAVLKKTRHEN-----------------ILLFMGACMNPPLAIITQWCEGSSLYTHLHVQETKFDMNTTID 492 (678)
T ss_pred ----HHHHHHHHHhhcchhh-----------------heeeehhhcCCceeeeehhccCchhhhhccchhhhhhHHHHHH
Confidence 3667777777766520 0110000012334789999999999988766666666666655
Q ss_pred HHHHHH--HHHHHhcCccccCCCCCCeEEccCCCCceEEEeccccccc
Q 002031 273 EITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKL 318 (977)
Q Consensus 273 ~l~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l 318 (977)
+.-++. +.++|..+|+|+|+|.-||++.++ ++|+|.|||++..-
T Consensus 493 IAqQiaqGM~YLHAK~IIHrDLKSnNIFl~~~--~kVkIgDFGLatvk 538 (678)
T KOG0193|consen 493 IAQQIAQGMDYLHAKNIIHRDLKSNNIFLHED--LKVKIGDFGLATVK 538 (678)
T ss_pred HHHHHHHhhhhhhhhhhhhhhccccceEEccC--CcEEEecccceeee
Confidence 555554 788999999999999999999865 89999999998653
|
|
| >KOG0597 consensus Serine-threonine protein kinase FUSED [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.32 E-value=2.3e-12 Score=144.71 Aligned_cols=139 Identities=19% Similarity=0.186 Sum_probs=92.1
Q ss_pred cccccccccEEEEEEec-CCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCcHHHH
Q 002031 124 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (977)
Q Consensus 124 ~piasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea 202 (977)
+.||.||+|.||+|+.+ +++.||+|+.... .+-..|++.++.-+++ .++.
T Consensus 8 e~iG~Gsfg~VYKgrrK~t~~~vAik~i~K~--gr~~k~l~~l~~ev~i---------------------------~r~l 58 (808)
T KOG0597|consen 8 EMIGEGSFGRVYKGRRKYTIQVVAIKFIDKS--GRNEKELKNLRQEVRI---------------------------LRSL 58 (808)
T ss_pred HHhcCCccceeeecccccceeEEEEEEehhc--CCchHHHHHHHHHHHH---------------------------HHhc
Confidence 46899999999999975 7899999986432 1223344433332222 2221
Q ss_pred --HHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeeecCCceEEeeccCCCCCCChHHHHhcC-CCHHHHHHHHHHHH-
Q 002031 203 --ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQSSETVLILEFMDGIRLNDCESLEAFG-VNKQKVVEEITRAY- 278 (977)
Q Consensus 203 --~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~~~~~vLVmE~i~G~~L~~~~~~~~~~-~~~~~l~~~l~~~~- 278 (977)
.|+..+.+.|+. +..-++|.||+.| .|..+.+ ..+ +..+.+-....+.+
T Consensus 59 kHpniv~m~esfEt------------------------~~~~~vVte~a~g-~L~~il~--~d~~lpEe~v~~~a~~LVs 111 (808)
T KOG0597|consen 59 KHPNIVEMLESFET------------------------SAHLWVVTEYAVG-DLFTILE--QDGKLPEEQVRAIAYDLVS 111 (808)
T ss_pred CCcchhhHHHhhcc------------------------cceEEEEehhhhh-hHHHHHH--hccCCCHHHHHHHHHHHHH
Confidence 133444433321 4556899999999 7766533 222 22233333333333
Q ss_pred -HHHHHhcCccccCCCCCCeEEccCCCCceEEEecccccccCH
Q 002031 279 -AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 320 (977)
Q Consensus 279 -l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 320 (977)
++.+|..++.|||+||.|||+... |.++|+|||+++..+.
T Consensus 112 aL~yLhs~rilhrd~kPqniLl~~~--~~~KlcdFg~Ar~m~~ 152 (808)
T KOG0597|consen 112 ALYYLHSNRILHRDMKPQNILLEKG--GTLKLCDFGLARAMST 152 (808)
T ss_pred HHHHHHhcCcccccCCcceeeecCC--Cceeechhhhhhhccc
Confidence 889999999999999999999854 8999999999988765
|
|
| >cd05096 PTKc_DDR1 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 1 | Back alignment and domain information |
|---|
Probab=99.32 E-value=9.1e-12 Score=138.85 Aligned_cols=141 Identities=18% Similarity=0.209 Sum_probs=91.9
Q ss_pred cccccccccEEEEEEecC-----------------CCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHH
Q 002031 124 TPLATASIAQVHRATLVD-----------------GRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIID 186 (977)
Q Consensus 124 ~piasaSigqV~~A~l~~-----------------G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~ 186 (977)
+.||+|++|.||+|+.++ +..||||+.++.......
T Consensus 11 ~~lg~G~fg~V~~~~~~~~~~~~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~--------------------------- 63 (304)
T cd05096 11 EKLGEGQFGEVHLCEVVNPQDLPTLQFPFNVRKGRPLLVAVKILRPDANKNAR--------------------------- 63 (304)
T ss_pred eEecccCCeEEEEEEeccCcccccccccccccCCcceEEEEEEecCCCCHHHH---------------------------
Confidence 579999999999998532 347999998775432111
Q ss_pred HHhhhcccccCcHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeee-cCCceEEeeccCCCCCCChHHHHhc--
Q 002031 187 EWCKEAPKELDFNSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAF-- 263 (977)
Q Consensus 187 e~~~~l~~Eld~~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLVmE~i~G~~L~~~~~~~~~-- 263 (977)
.+|.+|.+.+.++++ ..-+.+-..+. ....+|||||++|.+|.++......
T Consensus 64 ---------~~~~~E~~~l~~l~h-----------------~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~ 117 (304)
T cd05096 64 ---------NDFLKEVKILSRLKD-----------------PNIIRLLGVCVDEDPLCMITEYMENGDLNQFLSSHHLDD 117 (304)
T ss_pred ---------HHHHHHHHHHhhcCC-----------------CCeeEEEEEEecCCceEEEEecCCCCcHHHHHHhccccc
Confidence 124455555554422 11122222222 4557899999999999876432110
Q ss_pred ----------------CCCHHHHHHHHHHHH--HHHHHhcCccccCCCCCCeEEccCCCCceEEEecccccccC
Q 002031 264 ----------------GVNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 319 (977)
Q Consensus 264 ----------------~~~~~~l~~~l~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~ 319 (977)
.+....+...+.++. +..+|..|++|+|+||.|||++.+ +.++|+|||++..+.
T Consensus 118 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~ivH~dlkp~Nill~~~--~~~kl~DfG~~~~~~ 189 (304)
T cd05096 118 KEENGNDAVPPAHCLPAISYSSLLHVALQIASGMKYLSSLNFVHRDLATRNCLVGEN--LTIKIADFGMSRNLY 189 (304)
T ss_pred cccccccccccccccccccHHHHHHHHHHHHHHHHHHHHCCccccCcchhheEEcCC--ccEEECCCccceecc
Confidence 112223333333333 778999999999999999999865 899999999987653
|
Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 1 (DDR1) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR1 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR1 binds to all collagens tested to date (types I-IV). It is widely expressed in many tissues. It is abundant in the brain and is also found in k |
| >cd05598 STKc_LATS Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor | Back alignment and domain information |
|---|
Probab=99.31 E-value=6.7e-12 Score=144.52 Aligned_cols=142 Identities=15% Similarity=0.153 Sum_probs=90.7
Q ss_pred cccccccccEEEEEEec-CCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCcHHHH
Q 002031 124 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (977)
Q Consensus 124 ~piasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea 202 (977)
+.||.|++|.||+|+.+ +|+.||||+.+..-.. . .+ ..-.+.+|.
T Consensus 7 ~~lG~G~~g~V~~a~~~~~~~~~avK~~~~~~~~--~--------------------------~~------~~~~~~~E~ 52 (376)
T cd05598 7 KTIGIGAFGEVCLVRKVDTNALYAMKTLRKADVL--M--------------------------RN------QAAHVKAER 52 (376)
T ss_pred EEEEeCCCeEEEEEEECCCCCEEEEEEEcHHHHH--h--------------------------hh------hHHHHHHHH
Confidence 57999999999999974 7999999987531100 0 00 000123344
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeee-cCCceEEeeccCCCCCCChHHHHhcCCCHHHHHHHHHHHH--H
Q 002031 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--A 279 (977)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~--l 279 (977)
+.+.++.+ ...+.+-..+. ....+|||||++|++|.++... ...+....+...+.+++ +
T Consensus 53 ~il~~l~h-----------------~~iv~~~~~~~~~~~~~lv~E~~~~g~L~~~i~~-~~~~~~~~~~~~~~qi~~al 114 (376)
T cd05598 53 DILAEADN-----------------EWVVKLYYSFQDKDNLYFVMDYIPGGDMMSLLIR-LGIFEEDLARFYIAELTCAI 114 (376)
T ss_pred HHHHhCCC-----------------CCcceEEEEEEcCCEEEEEEeCCCCCcHHHHHHh-cCCCCHHHHHHHHHHHHHHH
Confidence 44333321 01112222222 4566899999999999876431 12233333333333333 7
Q ss_pred HHHHhcCccccCCCCCCeEEccCCCCceEEEecccccccC
Q 002031 280 HQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 319 (977)
Q Consensus 280 ~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~ 319 (977)
..+|..|++|||+||+|||++.+ +.++|+|||++..+.
T Consensus 115 ~~lH~~~ivHrDlkp~Nill~~~--~~ikL~DFG~a~~~~ 152 (376)
T cd05598 115 ESVHKMGFIHRDIKPDNILIDRD--GHIKLTDFGLCTGFR 152 (376)
T ss_pred HHHHHCCeEeCCCCHHHEEECCC--CCEEEEeCCCCcccc
Confidence 88999999999999999999865 899999999987553
|
Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS was originally identified in Drosophila using a screen for genes whose inactivation led to overproliferation of cells. In tetrapods, there are two LATS isoforms, LATS1 and LATS2. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. |
| >cd05151 ChoK Choline Kinase (ChoK) | Back alignment and domain information |
|---|
Probab=99.31 E-value=1.8e-11 Score=124.07 Aligned_cols=129 Identities=23% Similarity=0.361 Sum_probs=92.8
Q ss_pred ccccccccccEEEEEEecCCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCcHHHH
Q 002031 123 ETPLATASIAQVHRATLVDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (977)
Q Consensus 123 ~~piasaSigqV~~A~l~~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea 202 (977)
-+|++.|..++||+++. +|+.|+||+.+++.. ...++..|+
T Consensus 3 ~~~l~~G~~~~vy~~~~-~~~~~~lK~~~~~~~--------------------------------------~~~~~~~E~ 43 (170)
T cd05151 3 ISPLKGGMTNKNYRVEV-ANKKYVVRIPGNGTE--------------------------------------LLINRENEA 43 (170)
T ss_pred eeecCCcccCceEEEEE-CCeEEEEEeCCCCcc--------------------------------------cccCHHHHH
Confidence 36899999999999987 488999998665421 123566788
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeee--cCCceEEeeccCCCCCCChHHHHhcCCCHHHHHHHHHHHHHH
Q 002031 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ--SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAYAH 280 (977)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~--~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~l~ 280 (977)
+.+..+.+. ..+|+++. .+..++||||++|.++.+... .+ ......+.+. +.
T Consensus 44 ~~l~~l~~~-------------------~~~P~~~~~~~~~~~lv~e~i~G~~l~~~~~-----~~-~~~~~~l~~~-l~ 97 (170)
T cd05151 44 ENSKLAAEA-------------------GIGPKLYYFDPETGVLITEFIEGSELLTEDF-----SD-PENLEKIAKL-LK 97 (170)
T ss_pred HHHHHHHHh-------------------CCCCceEEEeCCCCeEEEEecCCCccccccc-----cC-HHHHHHHHHH-HH
Confidence 888877641 23677775 445799999999999875310 11 2233334433 55
Q ss_pred HHHhcC-----ccccCCCCCCeEEccCCCCceEEEecccccccC
Q 002031 281 QIYVDG-----FFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 319 (977)
Q Consensus 281 ~i~~~G-----~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~ 319 (977)
.+|..+ ++|+|+||+||+++ + +++++||||.+..-+
T Consensus 98 ~LH~~~~~~~~~~HgD~~~~Nil~~-~--~~~~liDf~~a~~~~ 138 (170)
T cd05151 98 KLHSSPLPDLVPCHNDLLPGNFLLD-D--GRLWLIDWEYAGMND 138 (170)
T ss_pred HHhCCCCCCceeecCCCCcCcEEEE-C--CeEEEEecccccCCC
Confidence 678776 59999999999998 3 689999999988644
|
The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC), and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. Bacterial ChoK is also referred to as licA protein. ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major ph |
| >KOG0658 consensus Glycogen synthase kinase-3 [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.31 E-value=2.9e-12 Score=138.69 Aligned_cols=78 Identities=23% Similarity=0.245 Sum_probs=54.3
Q ss_pred EEeeccCCCCCCChHHHH---hcCCC---HHHHHHHHHHHHHHHHHhcCccccCCCCCCeEEccCCCCceEEEecccccc
Q 002031 244 LILEFMDGIRLNDCESLE---AFGVN---KQKVVEEITRAYAHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKK 317 (977)
Q Consensus 244 LVmE~i~G~~L~~~~~~~---~~~~~---~~~l~~~l~~~~l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~ 317 (977)
|||||++ .+|.+....- ....+ .+-....+++. +..||..||.|||+||.|+||+.+ +|.++|+|||.++.
T Consensus 99 lVleymP-~tL~~~~r~~~~~~~~mp~~~iKLYt~Qlfrg-l~yLh~~~IcHRDIKPqNlLvD~~-tg~LKicDFGSAK~ 175 (364)
T KOG0658|consen 99 LVLEYMP-ETLYRVIRHYTRANQRMPLLEIKLYTYQLFRG-LAYLHSHGICHRDIKPQNLLVDPD-TGVLKICDFGSAKV 175 (364)
T ss_pred HHHHhch-HHHHHHHHHHhhcCCCCceeeeHHHHHHHHHH-HHHHHhcCcccCCCChheEEEcCC-CCeEEeccCCccee
Confidence 7999996 4555443210 11222 22333333333 667888999999999999999976 69999999999999
Q ss_pred cCHHHHH
Q 002031 318 LSSSMKQ 324 (977)
Q Consensus 318 l~~~~r~ 324 (977)
+.+.+..
T Consensus 176 L~~~epn 182 (364)
T KOG0658|consen 176 LVKGEPN 182 (364)
T ss_pred eccCCCc
Confidence 8765433
|
|
| >cd05595 STKc_PKB_beta Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B beta | Back alignment and domain information |
|---|
Probab=99.31 E-value=5.2e-12 Score=142.37 Aligned_cols=140 Identities=14% Similarity=0.120 Sum_probs=90.9
Q ss_pred ccccccccEEEEEEe-cCCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCcHHHHH
Q 002031 125 PLATASIAQVHRATL-VDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEAE 203 (977)
Q Consensus 125 piasaSigqV~~A~l-~~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea~ 203 (977)
.||.|++|.||+|+. .+|+.||+|+.+...... ..++ ..+.+|.+
T Consensus 2 ~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~-~~~~---------------------------------~~~~~E~~ 47 (323)
T cd05595 2 LLGKGTFGKVILVREKATGRYYAMKILRKEVIIA-KDEV---------------------------------AHTVTESR 47 (323)
T ss_pred eeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhh-hHHH---------------------------------HHHHHHHH
Confidence 589999999999997 479999999876432100 0000 01233444
Q ss_pred HHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeee-cCCceEEeeccCCCCCCChHHHHhcCCCHHHHHHHHHHHH--HH
Q 002031 204 NTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--AH 280 (977)
Q Consensus 204 n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~--l~ 280 (977)
.+..+.+ ...+.+-..+. ....+|||||++|.+|.+... ....++...+...+.+++ +.
T Consensus 48 ~l~~l~h-----------------p~i~~~~~~~~~~~~~~lv~E~~~~~~L~~~l~-~~~~~~~~~~~~~~~qi~~aL~ 109 (323)
T cd05595 48 VLQNTRH-----------------PFLTALKYAFQTHDRLCFVMEYANGGELFFHLS-RERVFTEERARFYGAEIVSALE 109 (323)
T ss_pred HHHhCCC-----------------CCCcceeeEEecCCEEEEEEeCCCCCcHHHHHH-HcCCCCHHHHHHHHHHHHHHHH
Confidence 4443322 00111212222 455689999999999865532 222345555554444444 78
Q ss_pred HHHhcCccccCCCCCCeEEccCCCCceEEEeccccccc
Q 002031 281 QIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKL 318 (977)
Q Consensus 281 ~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l 318 (977)
.+|..|++|+|+||.|||++.+ +.++|+|||++...
T Consensus 110 ~LH~~~ivH~Dlkp~NIll~~~--~~~kL~Dfg~~~~~ 145 (323)
T cd05595 110 YLHSRDVVYRDIKLENLMLDKD--GHIKITDFGLCKEG 145 (323)
T ss_pred HHHHCCeEecCCCHHHEEEcCC--CCEEecccHHhccc
Confidence 8999999999999999999865 89999999987653
|
Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, beta (or Akt2) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-beta is the predominant PKB isoform expressed in insulin-responsive tissues. It plays a critical role in the regulation of glucose homeostasis. It is also implicated in muscle cell differentiation. Mice deficient in |
| >PTZ00263 protein kinase A catalytic subunit; Provisional | Back alignment and domain information |
|---|
Probab=99.31 E-value=4.3e-12 Score=143.43 Aligned_cols=144 Identities=19% Similarity=0.150 Sum_probs=93.9
Q ss_pred ccccccccccEEEEEEec-CCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCcHHH
Q 002031 123 ETPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSE 201 (977)
Q Consensus 123 ~~piasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~E 201 (977)
.+.||+|++|.||+|+.+ +|+.||||+.+..... +... . -.+.+|
T Consensus 23 ~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~----~~~~--------------------~----------~~~~~E 68 (329)
T PTZ00263 23 GETLGTGSFGRVRIAKHKGTGEYYAIKCLKKREIL----KMKQ--------------------V----------QHVAQE 68 (329)
T ss_pred EEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHHh----hhhh--------------------H----------HHHHHH
Confidence 368999999999999985 7899999987532100 0000 0 023445
Q ss_pred HHHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeee-cCCceEEeeccCCCCCCChHHHHhcCCCHHHHHHHHHHHH--
Q 002031 202 AENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY-- 278 (977)
Q Consensus 202 a~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~-- 278 (977)
...+.++.+ ..-+.+-..+. ....++||||++|.+|.+.... ...+....+...+.+++
T Consensus 69 ~~~l~~l~h-----------------p~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~-~~~~~~~~~~~~~~qi~~a 130 (329)
T PTZ00263 69 KSILMELSH-----------------PFIVNMMCSFQDENRVYFLLEFVVGGELFTHLRK-AGRFPNDVAKFYHAELVLA 130 (329)
T ss_pred HHHHHhCCC-----------------CCCCcEEEEEEcCCEEEEEEcCCCCChHHHHHHH-cCCCCHHHHHHHHHHHHHH
Confidence 555444422 01112222222 4567899999999998765331 22233333333333333
Q ss_pred HHHHHhcCccccCCCCCCeEEccCCCCceEEEecccccccCH
Q 002031 279 AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 320 (977)
Q Consensus 279 l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 320 (977)
+..+|..|++|+|+||.|||++.+ +.++|+|||++..+..
T Consensus 131 L~~LH~~~ivH~dlkp~NIll~~~--~~~kl~Dfg~~~~~~~ 170 (329)
T PTZ00263 131 FEYLHSKDIIYRDLKPENLLLDNK--GHVKVTDFGFAKKVPD 170 (329)
T ss_pred HHHHHHCCeeecCCCHHHEEECCC--CCEEEeeccCceEcCC
Confidence 788999999999999999999865 8999999999987754
|
|
| >cd05594 STKc_PKB_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B alpha | Back alignment and domain information |
|---|
Probab=99.31 E-value=8.2e-12 Score=140.85 Aligned_cols=137 Identities=15% Similarity=0.136 Sum_probs=89.8
Q ss_pred ccccccccEEEEEEe-cCCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCcHHHHH
Q 002031 125 PLATASIAQVHRATL-VDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEAE 203 (977)
Q Consensus 125 piasaSigqV~~A~l-~~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea~ 203 (977)
.||+|++|+||+|+. .+|+.||||+.++..... ..+ ...+..|.+
T Consensus 2 ~lG~G~~g~V~~~~~~~~~~~~a~K~~~~~~~~~-~~~---------------------------------~~~~~~e~~ 47 (325)
T cd05594 2 LLGKGTFGKVILVKEKATGRYYAMKILKKEVIVA-KDE---------------------------------VAHTLTENR 47 (325)
T ss_pred eeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhh-hhH---------------------------------HHHHHHHHH
Confidence 589999999999987 479999999876432100 000 001223444
Q ss_pred HHHHHHHHhCCCCCCCCCCCCCCCCCCeEecee---ee-cCCceEEeeccCCCCCCChHHHHhcCCCHHHHHHHHHHHH-
Q 002031 204 NTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEV---IQ-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY- 278 (977)
Q Consensus 204 n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v---~~-~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~- 278 (977)
.+..+.+ + .|+.+ +. ....+|||||++|.+|.+... ....+....+...+.+++
T Consensus 48 ~l~~~~h------------------p--~i~~~~~~~~~~~~~~lv~E~~~~~~L~~~l~-~~~~l~~~~~~~~~~qi~~ 106 (325)
T cd05594 48 VLQNSRH------------------P--FLTALKYSFQTHDRLCFVMEYANGGELFFHLS-RERVFSEDRARFYGAEIVS 106 (325)
T ss_pred HHHhCCC------------------C--CCCceEEEEEcCCEEEEEEeCCCCCcHHHHHH-hcCCCCHHHHHHHHHHHHH
Confidence 3333221 1 12222 22 455689999999998865532 222345555555444444
Q ss_pred -HHHHHh-cCccccCCCCCCeEEccCCCCceEEEeccccccc
Q 002031 279 -AHQIYV-DGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKL 318 (977)
Q Consensus 279 -l~~i~~-~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l 318 (977)
+..+|. .|++|||+||.|||++.+ +.++|+|||++...
T Consensus 107 aL~~lH~~~~ivHrDikp~NIll~~~--~~~kL~Dfg~~~~~ 146 (325)
T cd05594 107 ALDYLHSEKNVVYRDLKLENLMLDKD--GHIKITDFGLCKEG 146 (325)
T ss_pred HHHHHHhcCCEEecCCCCCeEEECCC--CCEEEecCCCCeec
Confidence 788896 799999999999999865 89999999998653
|
Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, alpha (or Akt1) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-alpha is predominantly expressed in endothelial cells. It is critical for the regulation of angiogenesis and the maintenance of vascular integrity. It also plays a role in adipocyte differentiation. Mice deficien |
| >cd05584 STKc_p70S6K Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase | Back alignment and domain information |
|---|
Probab=99.31 E-value=5.9e-12 Score=141.93 Aligned_cols=142 Identities=19% Similarity=0.182 Sum_probs=90.2
Q ss_pred cccccccccEEEEEEe----cCCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCcH
Q 002031 124 TPLATASIAQVHRATL----VDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFN 199 (977)
Q Consensus 124 ~piasaSigqV~~A~l----~~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~ 199 (977)
+.||+|++|.||+|+. .+|+.||||+.+.... ..+.. ....+.
T Consensus 2 ~~lg~G~~g~V~~~~~~~~~~~~~~~avK~~~~~~~---~~~~~------------------------------~~~~~~ 48 (323)
T cd05584 2 KVLGKGGYGKVFQVRKVTGADTGKIFAMKVLKKATI---VRNQK------------------------------DTAHTK 48 (323)
T ss_pred ceeeecCCeEEEEEEEcccCCCCCEEEEEEEEHHHH---Hhhhh------------------------------hHHHHH
Confidence 4689999999999986 3688999998753211 00000 001233
Q ss_pred HHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeee-cCCceEEeeccCCCCCCChHHHHhcCCCHHHHHHHHHHHH
Q 002031 200 SEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY 278 (977)
Q Consensus 200 ~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~ 278 (977)
.|...+..+.+ ..-+.+-..+. ....++||||++|.+|.+.... ...+....+...+.+++
T Consensus 49 ~E~~il~~l~h-----------------p~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~-~~~~~~~~~~~~~~qi~ 110 (323)
T cd05584 49 AERNILEAVKH-----------------PFIVDLIYAFQTGGKLYLILEYLSGGELFMHLER-EGIFMEDTACFYLSEIS 110 (323)
T ss_pred HHHHHHHhCCC-----------------CchhceeeEEecCCeEEEEEeCCCCchHHHHHHH-cCCCCHHHHHHHHHHHH
Confidence 45555444422 00111222222 4556899999999998765321 12233333333333333
Q ss_pred --HHHHHhcCccccCCCCCCeEEccCCCCceEEEeccccccc
Q 002031 279 --AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKL 318 (977)
Q Consensus 279 --l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l 318 (977)
+..+|..|++|+|+||.|||++.+ +.++|+|||+++..
T Consensus 111 ~~l~~lH~~~ivH~dlkp~Nil~~~~--~~~kl~Dfg~~~~~ 150 (323)
T cd05584 111 LALEHLHQQGIIYRDLKPENILLDAQ--GHVKLTDFGLCKES 150 (323)
T ss_pred HHHHHHHHCCeecCCCCHHHeEECCC--CCEEEeeCcCCeec
Confidence 788999999999999999999865 89999999998643
|
Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the in |
| >cd05621 STKc_ROCK2 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 2 | Back alignment and domain information |
|---|
Probab=99.31 E-value=6.8e-12 Score=144.25 Aligned_cols=142 Identities=17% Similarity=0.160 Sum_probs=92.3
Q ss_pred cccccccccEEEEEEec-CCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCcHHHH
Q 002031 124 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (977)
Q Consensus 124 ~piasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea 202 (977)
+.||.|++|.||+|+.+ +|+.||+|+........ ..+. -.+..|.
T Consensus 49 ~~lG~G~fg~Vy~~~~~~~~~~~aiK~~~~~~~~~-~~~~---------------------------------~~~~~e~ 94 (370)
T cd05621 49 KVIGRGAFGEVQLVRHKSSQKVYAMKLLSKFEMIK-RSDS---------------------------------AFFWEER 94 (370)
T ss_pred EEEEecCCeEEEEEEECCCCCEEEEEEEEHHHhhh-hhhH---------------------------------HHHHHHH
Confidence 56999999999999985 68999999874210000 0000 0122333
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeee-cCCceEEeeccCCCCCCChHHHHhcCCCHHHHHHHHHHHH--H
Q 002031 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--A 279 (977)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~--l 279 (977)
..+..+.+ ...+.+-..+. ....++||||++|++|.++. ....++...+...+.+++ +
T Consensus 95 ~i~~~~~h-----------------p~iv~~~~~~~~~~~~~lv~Ey~~gg~L~~~l--~~~~~~~~~~~~~~~qil~aL 155 (370)
T cd05621 95 DIMAFANS-----------------PWVVQLFCAFQDDKYLYMVMEYMPGGDLVNLM--SNYDVPEKWAKFYTAEVVLAL 155 (370)
T ss_pred HHHHhCCC-----------------CCEeeEEEEEEcCCEEEEEEcCCCCCcHHHHH--HhcCCCHHHHHHHHHHHHHHH
Confidence 33322211 11122222222 45578999999999998764 333455444444444433 7
Q ss_pred HHHHhcCccccCCCCCCeEEccCCCCceEEEecccccccCH
Q 002031 280 HQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 320 (977)
Q Consensus 280 ~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 320 (977)
..+|..|++|||+||+|||++.+ +.++|+|||++..+..
T Consensus 156 ~~LH~~~IvHrDLKp~NILl~~~--~~~kL~DFG~a~~~~~ 194 (370)
T cd05621 156 DAIHSMGLIHRDVKPDNMLLDKH--GHLKLADFGTCMKMDE 194 (370)
T ss_pred HHHHHCCeEecCCCHHHEEECCC--CCEEEEecccceeccc
Confidence 88999999999999999999865 8999999999887643
|
Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK2 was the first identified target of activated RhoA, and was found |
| >cd05601 STKc_CRIK Catalytic domain of the Protein Serine/Threonine Kinase, Citron Rho-interacting kinase | Back alignment and domain information |
|---|
Probab=99.31 E-value=7.9e-12 Score=141.21 Aligned_cols=141 Identities=18% Similarity=0.244 Sum_probs=92.8
Q ss_pred cccccccccEEEEEEec-CCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCcHHHH
Q 002031 124 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (977)
Q Consensus 124 ~piasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea 202 (977)
+.||.|++|.||+|+.+ +|+.||||+.+...... .... -.+..|.
T Consensus 7 ~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~-~~~~---------------------------------~~~~~e~ 52 (330)
T cd05601 7 SLVGRGHFGEVQVVREKATGDIYAMKVMKKSVLLA-QETV---------------------------------SFFEEER 52 (330)
T ss_pred EEEEeccCEEEEEEEECCCCCEEEEEEEEHHHhhh-hhHH---------------------------------HHHHHHH
Confidence 57999999999999974 79999999876421100 0000 0122233
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceee---e-cCCceEEeeccCCCCCCChHHHHhcCCCHHHHHHHHHHHH
Q 002031 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVI---Q-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY 278 (977)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~---~-~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~ 278 (977)
..+..+.+ -.|+.++ . ....+|||||++|.+|.++.......++...+...+.+++
T Consensus 53 ~i~~~~~~--------------------~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~l~~~~~~~~~~qi~ 112 (330)
T cd05601 53 DILSISNS--------------------PWIPQLQYAFQDKDNLYLVMEYQPGGDLLSLLNRYEDQFDEDMAQFYLAELV 112 (330)
T ss_pred HHHHhCCC--------------------CCCcceeeEEecCCeEEEEECCCCCCCHHHHHHHhcCCCCHHHHHHHHHHHH
Confidence 32222111 1122222 2 4556899999999999877443223455554444444433
Q ss_pred --HHHHHhcCccccCCCCCCeEEccCCCCceEEEecccccccCH
Q 002031 279 --AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 320 (977)
Q Consensus 279 --l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 320 (977)
+..+|..|++|+|+||.|||++.+ +.++|+|||++..+..
T Consensus 113 ~aL~~lH~~~i~H~Dlkp~NIll~~~--~~~kL~Dfg~a~~~~~ 154 (330)
T cd05601 113 LAIHSVHQMGYVHRDIKPENVLIDRT--GHIKLADFGSAARLTA 154 (330)
T ss_pred HHHHHHHHCCeEcccCchHheEECCC--CCEEeccCCCCeECCC
Confidence 788999999999999999999865 8999999999987653
|
Serine/Threonine Kinases (STKs), Citron Rho-interacting kinase (CRIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CRIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CRIK is also called citron kinase. It contains a catalytic domain, a central coiled-coil domain, and a C-terminal region containing a Rho-binding domain (RBD), a zinc finger, and a pleckstrin homology (PH) domain, in addition to other motifs. CRIK, an effector of the small GTPase Rho, plays an important function during cytokinesis and affects its contractile process. CRIK-deficient mice show severe ataxia and epilepsy as a result of abnor |
| >cd05590 STKc_nPKC_eta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta | Back alignment and domain information |
|---|
Probab=99.30 E-value=8.9e-12 Score=140.29 Aligned_cols=77 Identities=17% Similarity=0.183 Sum_probs=58.5
Q ss_pred cCCceEEeeccCCCCCCChHHHHhcCCCHHHHHHHHHHHH--HHHHHhcCccccCCCCCCeEEccCCCCceEEEeccccc
Q 002031 239 SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTK 316 (977)
Q Consensus 239 ~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~ 316 (977)
....++||||++|.+|.+... ....++...+...+.+++ +..+|..|++|||+||.|||++.+ +.++|+|||++.
T Consensus 68 ~~~~~iv~Ey~~~g~L~~~i~-~~~~l~~~~~~~~~~ql~~~L~~lH~~~ivH~dlkp~NIli~~~--~~~kL~DfG~~~ 144 (320)
T cd05590 68 PDRLFFVMEFVNGGDLMFHIQ-KSRRFDEARARFYAAEITSALMFLHDKGIIYRDLKLDNVLLDHE--GHCKLADFGMCK 144 (320)
T ss_pred CCEEEEEEcCCCCchHHHHHH-HcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeCCCCHHHeEECCC--CcEEEeeCCCCe
Confidence 455689999999998876532 223355555544444443 788999999999999999999865 899999999987
Q ss_pred cc
Q 002031 317 KL 318 (977)
Q Consensus 317 ~l 318 (977)
..
T Consensus 145 ~~ 146 (320)
T cd05590 145 EG 146 (320)
T ss_pred ec
Confidence 53
|
Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signal |
| >cd05612 STKc_PRKX_like Catalytic domain of PRKX-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.30 E-value=6e-12 Score=139.60 Aligned_cols=140 Identities=19% Similarity=0.174 Sum_probs=90.9
Q ss_pred cccccccccEEEEEEec-CCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCcHHHH
Q 002031 124 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (977)
Q Consensus 124 ~piasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea 202 (977)
+.||+|++|.||+|+.+ +|+.||||+........ .+. .-.+.+|.
T Consensus 7 ~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~----~~~------------------------------~~~~~~E~ 52 (291)
T cd05612 7 KTVGTGTFGRVHLVRDRISEHYYALKVMAIPEVIR----LKQ------------------------------EQHVHNEK 52 (291)
T ss_pred eeeecCCCeEEEEEEEcCCCCEEEEEEEEHHHHhh----hHH------------------------------HHHHHHHH
Confidence 57999999999999975 79999999875321100 000 00122333
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeee----cCCceEEeeccCCCCCCChHHHHhcCCCHHHHHHHHHHHH
Q 002031 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ----SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY 278 (977)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~----~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~ 278 (977)
..+.++.+ ..|.+++. ....++||||++|.+|.+.... ...+....+...+.+++
T Consensus 53 ~~l~~l~h--------------------p~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~-~~~~~~~~~~~~~~qi~ 111 (291)
T cd05612 53 RVLKEVSH--------------------PFIIRLFWTEHDQRFLYMLMEYVPGGELFSYLRN-SGRFSNSTGLFYASEIV 111 (291)
T ss_pred HHHHhCCC--------------------CcHhhhHhhhccCCeEEEEEeCCCCCCHHHHHHH-cCCCCHHHHHHHHHHHH
Confidence 33333211 11222221 3445799999999998776432 22344444444444433
Q ss_pred --HHHHHhcCccccCCCCCCeEEccCCCCceEEEecccccccCH
Q 002031 279 --AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 320 (977)
Q Consensus 279 --l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 320 (977)
+..+|..|++|+|+||.|||++.+ +.++|+|||++..+..
T Consensus 112 ~~l~~lH~~~i~H~dlkp~NIli~~~--~~~kl~Dfg~~~~~~~ 153 (291)
T cd05612 112 CALEYLHSKEIVYRDLKPENILLDKE--GHIKLTDFGFAKKLRD 153 (291)
T ss_pred HHHHHHHHCCeeecCCCHHHeEECCC--CCEEEEecCcchhccC
Confidence 788999999999999999999865 8999999999876643
|
Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyt |
| >cd05102 PTKc_VEGFR3 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 3 | Back alignment and domain information |
|---|
Probab=99.30 E-value=6e-12 Score=142.60 Aligned_cols=49 Identities=16% Similarity=0.216 Sum_probs=39.2
Q ss_pred HHHHHHHHHH--HHHHHhcCccccCCCCCCeEEccCCCCceEEEecccccccC
Q 002031 269 KVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 319 (977)
Q Consensus 269 ~l~~~l~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~ 319 (977)
.+...+.++. +..+|..|++|||+||.|||++.+ +.++|+|||+++.+.
T Consensus 175 ~~~~~~~qi~~aL~~LH~~~ivHrDiKp~Nil~~~~--~~~kl~DfG~a~~~~ 225 (338)
T cd05102 175 DLICYSFQVARGMEFLASRKCIHRDLAARNILLSEN--NVVKICDFGLARDIY 225 (338)
T ss_pred HHHHHHHHHHHHHHHHHHCCEECCCCccceEEEcCC--CcEEEeecccccccc
Confidence 3333334433 788999999999999999999865 899999999998664
|
Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 3 (VEGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR3 (or Flt4) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. V |
| >cd05591 STKc_nPKC_epsilon Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C epsilon | Back alignment and domain information |
|---|
Probab=99.30 E-value=1.1e-11 Score=139.65 Aligned_cols=77 Identities=16% Similarity=0.163 Sum_probs=57.7
Q ss_pred cCCceEEeeccCCCCCCChHHHHhcCCCHHHHHHHHHHHH--HHHHHhcCccccCCCCCCeEEccCCCCceEEEeccccc
Q 002031 239 SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTK 316 (977)
Q Consensus 239 ~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~ 316 (977)
....+|||||++|.+|.+... ....++...+...+.+++ +..+|..|++|||+||.|||++.+ +.++|+|||++.
T Consensus 68 ~~~~~lv~E~~~~~~L~~~l~-~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDikp~Nill~~~--~~~kL~Dfg~~~ 144 (321)
T cd05591 68 KDRLFFVMEYVNGGDLMFQIQ-RSRKFDEPRSRFYAAEVTLALMFLHRHGVIYRDLKLDNILLDAE--GHCKLADFGMCK 144 (321)
T ss_pred CCeEEEEEeCCCCCcHHHHHH-HcCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHeEECCC--CCEEEeecccce
Confidence 345689999999998875532 222344444444444433 788999999999999999999865 899999999987
Q ss_pred cc
Q 002031 317 KL 318 (977)
Q Consensus 317 ~l 318 (977)
..
T Consensus 145 ~~ 146 (321)
T cd05591 145 EG 146 (321)
T ss_pred ec
Confidence 53
|
Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), epsilon isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to |
| >cd05625 STKc_LATS1 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 1 | Back alignment and domain information |
|---|
Probab=99.30 E-value=1e-11 Score=143.44 Aligned_cols=138 Identities=15% Similarity=0.151 Sum_probs=89.8
Q ss_pred cccccccccEEEEEEe-cCCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCcHHHH
Q 002031 124 TPLATASIAQVHRATL-VDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (977)
Q Consensus 124 ~piasaSigqV~~A~l-~~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea 202 (977)
+.||.|++|+||+|+. .+++.||||+.+.... .. .. . .-.+.+|.
T Consensus 7 ~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~--~~--~~------------------------~------~~~~~~E~ 52 (382)
T cd05625 7 KTLGIGAFGEVCLARKVDTKALYAMKTLRKKDV--LL--RN------------------------Q------VAHVKAER 52 (382)
T ss_pred EEEEeCCCEEEEEEEECCCCCEEEEEEEeHHHh--hh--HH------------------------H------HHHHHHHH
Confidence 5799999999999997 4789999998753210 00 00 0 00123344
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceee---e-cCCceEEeeccCCCCCCChHHHHhcCCCHHHHHHHHHHHH
Q 002031 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVI---Q-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY 278 (977)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~---~-~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~ 278 (977)
+.+.++.+ -.|.+++ . ....+|||||++|++|.++.. +...+....+...+.+++
T Consensus 53 ~il~~~~h--------------------~~iv~~~~~~~~~~~~~lv~E~~~gg~L~~~l~-~~~~~~e~~~~~~~~qi~ 111 (382)
T cd05625 53 DILAEADN--------------------EWVVRLYYSFQDKDNLYFVMDYIPGGDMMSLLI-RMGIFPEDLARFYIAELT 111 (382)
T ss_pred HHHHhCCC--------------------CcCCeEEEEEEeCCEEEEEEeCCCCCcHHHHHH-hcCCCCHHHHHHHHHHHH
Confidence 44333321 1223333 2 455689999999998877632 112233333333333333
Q ss_pred --HHHHHhcCccccCCCCCCeEEccCCCCceEEEeccccccc
Q 002031 279 --AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKL 318 (977)
Q Consensus 279 --l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l 318 (977)
+..+|..|++|||+||.|||++.+ +.++|+|||++..+
T Consensus 112 ~al~~lH~~~ivHrDlKp~NILl~~~--g~~kL~DFGla~~~ 151 (382)
T cd05625 112 CAVESVHKMGFIHRDIKPDNILIDRD--GHIKLTDFGLCTGF 151 (382)
T ss_pred HHHHHHHhCCeecCCCCHHHEEECCC--CCEEEeECCCCccc
Confidence 788999999999999999999865 89999999998654
|
Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. Promoter methylation, loss of heterozygosity, and missense mutations targeting the LATS1 gene have also been found in human sarcomas and ovarian cancers. In addition, decreased expression of LATS1 is associated with an aggressive phenotype an |
| >cd07869 STKc_PFTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase | Back alignment and domain information |
|---|
Probab=99.30 E-value=7e-12 Score=139.76 Aligned_cols=139 Identities=21% Similarity=0.225 Sum_probs=91.1
Q ss_pred cccccccccEEEEEEec-CCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCcHHHH
Q 002031 124 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (977)
Q Consensus 124 ~piasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea 202 (977)
+.||.|++|.||+|+.+ +|+.||||+.+...... ....+.+|+
T Consensus 11 ~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~------------------------------------~~~~~~~E~ 54 (303)
T cd07869 11 EKLGEGSYATVYKGKSKVNGKLVALKVIRLQEEEG------------------------------------TPFTAIREA 54 (303)
T ss_pred eeEEecCCEEEEEEEECCCCCEEEEEEeccccccc------------------------------------cchhHHHHH
Confidence 67999999999999985 79999999875321100 011233455
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeee-cCCceEEeeccCCCCCCChHHHHhcCCCHHHHHHHHHHHH--H
Q 002031 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--A 279 (977)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~--l 279 (977)
..+.++.+ ...+.+..++. ....++||||++| .+.+........+....+...+.+++ +
T Consensus 55 ~~l~~l~h-----------------~niv~~~~~~~~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~qi~~al 116 (303)
T cd07869 55 SLLKGLKH-----------------ANIVLLHDIIHTKETLTLVFEYVHT-DLCQYMDKHPGGLHPENVKLFLFQLLRGL 116 (303)
T ss_pred HHHhhCCC-----------------CCcCeEEEEEecCCeEEEEEECCCc-CHHHHHHhCCCCCCHHHHHHHHHHHHHHH
Confidence 54444322 11223333333 4557899999976 33332221223355555555555544 7
Q ss_pred HHHHhcCccccCCCCCCeEEccCCCCceEEEeccccccc
Q 002031 280 HQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKL 318 (977)
Q Consensus 280 ~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l 318 (977)
..+|..|++|+|+||+|||++.+ +.++|+|||++...
T Consensus 117 ~~lH~~~ivH~dlkp~Nill~~~--~~~kl~Dfg~~~~~ 153 (303)
T cd07869 117 SYIHQRYILHRDLKPQNLLISDT--GELKLADFGLARAK 153 (303)
T ss_pred HHHHHCCeecCCCCHHHEEECCC--CCEEECCCCcceec
Confidence 88999999999999999999865 89999999998654
|
Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 an |
| >cd05624 STKc_MRCK_beta Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase beta | Back alignment and domain information |
|---|
Probab=99.29 E-value=1.2e-11 Score=140.04 Aligned_cols=80 Identities=20% Similarity=0.172 Sum_probs=60.1
Q ss_pred cCCceEEeeccCCCCCCChHHHHhcCCCHHHHHHHHHHHH--HHHHHhcCccccCCCCCCeEEccCCCCceEEEeccccc
Q 002031 239 SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTK 316 (977)
Q Consensus 239 ~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~ 316 (977)
....+|||||++|++|.++.......+....+...+.+++ ++.+|..|++|+|+||+|||++.+ +.++|+|||++.
T Consensus 73 ~~~~~lv~Ey~~gg~L~~~l~~~~~~l~~~~~~~~~~qi~~~L~~lH~~~iiHrDlkp~Nill~~~--~~~kl~DfG~a~ 150 (331)
T cd05624 73 ENYLYLVMDYYVGGDLLTLLSKFEDRLPEDMARFYIAEMVLAIHSIHQLHYVHRDIKPDNVLLDMN--GHIRLADFGSCL 150 (331)
T ss_pred CCEEEEEEeCCCCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCchHHEEEcCC--CCEEEEecccee
Confidence 4556899999999999887543223344444443333333 788899999999999999999855 899999999987
Q ss_pred ccCH
Q 002031 317 KLSS 320 (977)
Q Consensus 317 ~l~~ 320 (977)
.+..
T Consensus 151 ~~~~ 154 (331)
T cd05624 151 KMNQ 154 (331)
T ss_pred eccC
Confidence 7643
|
Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) beta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKbeta is expressed ubiquitously in many tissues. |
| >cd05615 STKc_cPKC_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C alpha | Back alignment and domain information |
|---|
Probab=99.29 E-value=7.5e-12 Score=141.11 Aligned_cols=139 Identities=14% Similarity=0.133 Sum_probs=90.7
Q ss_pred cccccccccEEEEEEec-CCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCcHHHH
Q 002031 124 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (977)
Q Consensus 124 ~piasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea 202 (977)
+.||.|++|+||+|+.+ +|+.||||+.+...... ..+. -.+..|.
T Consensus 6 ~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~-~~~~---------------------------------~~~~~e~ 51 (323)
T cd05615 6 MVLGKGSFGKVMLAERKGTDELYAIKILKKDVVIQ-DDDV---------------------------------ECTMVEK 51 (323)
T ss_pred EEEEecCCeEEEEEEECCCCCEEEEEEEEHHHhhh-hhHH---------------------------------HHHHHHH
Confidence 57999999999999974 79999999876421100 0000 0122333
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceee---e-cCCceEEeeccCCCCCCChHHHHhcCCCHHHHHHHHHHHH
Q 002031 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVI---Q-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY 278 (977)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~---~-~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~ 278 (977)
+.+..+.+ .-.|+.++ . ....+|||||++|.+|.+... ....++...+...+.+++
T Consensus 52 ~~l~~~~~-------------------~~~i~~~~~~~~~~~~~~lv~Ey~~~g~L~~~i~-~~~~l~~~~~~~i~~qi~ 111 (323)
T cd05615 52 RVLALQDK-------------------PPFLTQLHSCFQTVDRLYFVMEYVNGGDLMYHIQ-QVGKFKEPQAVFYAAEIS 111 (323)
T ss_pred HHHHhccC-------------------CCchhheeeEEecCCEEEEEEcCCCCCcHHHHHH-HcCCCCHHHHHHHHHHHH
Confidence 33322211 11122222 2 345689999999998876532 122345555555555544
Q ss_pred --HHHHHhcCccccCCCCCCeEEccCCCCceEEEeccccccc
Q 002031 279 --AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKL 318 (977)
Q Consensus 279 --l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l 318 (977)
+..+|..|++|+|+||+|||++.+ +.++|+|||++...
T Consensus 112 ~al~~lH~~~ivHrDikp~Nill~~~--~~ikL~Dfg~~~~~ 151 (323)
T cd05615 112 VGLFFLHRRGIIYRDLKLDNVMLDSE--GHIKIADFGMCKEH 151 (323)
T ss_pred HHHHHHHHCCeeccCCCHHHeEECCC--CCEEEecccccccc
Confidence 788999999999999999999865 89999999998754
|
Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, a |
| >cd05585 STKc_YPK1_like Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.29 E-value=1e-11 Score=139.19 Aligned_cols=138 Identities=17% Similarity=0.096 Sum_probs=90.0
Q ss_pred cccccccEEEEEEec-CCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCcHHHHHH
Q 002031 126 LATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEAEN 204 (977)
Q Consensus 126 iasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea~n 204 (977)
||.|++|.||+|+.+ +|+.||||+.+...... ..+ ...+..|...
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~~~-~~~---------------------------------~~~~~~E~~~ 46 (312)
T cd05585 1 IGKGSFGKVMQVRKRDTQRIYALKTIRKAHIVS-RSE---------------------------------VTHTLAERTV 46 (312)
T ss_pred CCcCCCeEEEEEEECCCCCEEEEEEEEHHHhhh-hhH---------------------------------HHHHHHHHHH
Confidence 689999999999975 68999999875321000 000 0012334444
Q ss_pred HHHHHHHhCCCCCCCCCCCCCCCCCC-eEeceeee-cCCceEEeeccCCCCCCChHHHHhcCCCHHHHHHHHHHHH--HH
Q 002031 205 TRIVSANLGCKNKHEDSNKKPAYEVD-VLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--AH 280 (977)
Q Consensus 205 ~~~~~~~~~~~~~~~~~~~~~~~~~~-v~vP~v~~-~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~--l~ 280 (977)
+.++.+ +. +.+-..+. ....++||||++|.+|.+.... ...++...+...+.+++ +.
T Consensus 47 l~~l~h------------------~~iv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~-~~~~~~~~~~~~~~qi~~~l~ 107 (312)
T cd05585 47 LAQVNC------------------PFIVPLKFSFQSPEKLYLVLAFINGGELFHHLQR-EGRFDLSRARFYTAELLCALE 107 (312)
T ss_pred HHhCCC------------------CcEeceeeEEecCCeEEEEEcCCCCCcHHHHHHh-cCCCCHHHHHHHHHHHHHHHH
Confidence 444321 11 11112222 4567899999999998766432 22345444444444433 78
Q ss_pred HHHhcCccccCCCCCCeEEccCCCCceEEEeccccccc
Q 002031 281 QIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKL 318 (977)
Q Consensus 281 ~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l 318 (977)
.+|..|++|||+||.|||++.+ +.++|+|||++...
T Consensus 108 ~lH~~~i~HrDlkp~Nili~~~--~~~kl~Dfg~~~~~ 143 (312)
T cd05585 108 NLHKFNVIYRDLKPENILLDYQ--GHIALCDFGLCKLN 143 (312)
T ss_pred HHHhCCeEeCCCCHHHeEECCC--CcEEEEECcccccC
Confidence 8999999999999999999865 89999999998754
|
Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It pl |
| >cd05597 STKc_DMPK_like Catalytic domain of Myotonic Dystrophy protein kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.29 E-value=1e-11 Score=140.51 Aligned_cols=141 Identities=16% Similarity=0.144 Sum_probs=91.9
Q ss_pred cccccccccEEEEEEec-CCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCcHHHH
Q 002031 124 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (977)
Q Consensus 124 ~piasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea 202 (977)
+.||+|++|+||+|+.+ +|+.||||+.+..-... ..+. -.+..|.
T Consensus 7 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~-~~~~---------------------------------~~~~~e~ 52 (331)
T cd05597 7 KVIGRGAFGEVAVVKMKNTGQVYAMKILNKWEMLK-RAET---------------------------------ACFREER 52 (331)
T ss_pred EEEEecCCeEEEEEEECCCCCEEEEEEEEHHHHhh-hhhH---------------------------------HHHHHHH
Confidence 57999999999999974 79999999875310000 0000 0122333
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceee---e-cCCceEEeeccCCCCCCChHHHHhcCCCHHHHHHHHHHHH
Q 002031 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVI---Q-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY 278 (977)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~---~-~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~ 278 (977)
..+..+.+ -.|+.++ . ....++||||++|.+|.++.......+....+...+.+++
T Consensus 53 ~~l~~~~~--------------------~~i~~~~~~~~~~~~~~lv~e~~~g~~L~~~l~~~~~~~~~~~~~~~~~qi~ 112 (331)
T cd05597 53 DVLVNGDR--------------------RWITNLHYAFQDENNLYLVMDYYVGGDLLTLLSKFEDRLPEDMARFYLAEMV 112 (331)
T ss_pred HHHHhCCC--------------------CCCCceEEEEecCCeEEEEEecCCCCcHHHHHHHhcCCCCHHHHHHHHHHHH
Confidence 33322211 1222222 2 3456899999999999877532223344444444444433
Q ss_pred --HHHHHhcCccccCCCCCCeEEccCCCCceEEEecccccccCH
Q 002031 279 --AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 320 (977)
Q Consensus 279 --l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 320 (977)
+..+|..|++|+|+||.|||++.+ +.++|+|||++..+..
T Consensus 113 ~~l~~lH~~~ivH~dlkp~Nill~~~--~~~kl~Dfg~~~~~~~ 154 (331)
T cd05597 113 LAIDSVHQLGYVHRDIKPDNVLLDKN--GHIRLADFGSCLRLLA 154 (331)
T ss_pred HHHHHHHhCCeEECCCCHHHEEECCC--CCEEEEECCceeecCC
Confidence 788999999999999999999865 8999999999876643
|
Serine/Threonine Kinases (STKs), Myotonic Dystrophy protein kinase (DMPK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The DMPK-like subfamily is composed of DMPK and DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK). Three isoforms of MRCK are known, named alpha, beta and gamma. The DMPK gene is implicated in myotonic dystrophy 1 (DM1), an inherited multisystemic disorder with symptoms that include muscle hyperexcitability, progressive muscle weakness and wasting, cataract development, testicular atrophy, |
| >cd05620 STKc_nPKC_delta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta | Back alignment and domain information |
|---|
Probab=99.29 E-value=7e-12 Score=140.89 Aligned_cols=76 Identities=16% Similarity=0.218 Sum_probs=57.7
Q ss_pred cCCceEEeeccCCCCCCChHHHHhcCCCHHHHHHHHHHHH--HHHHHhcCccccCCCCCCeEEccCCCCceEEEeccccc
Q 002031 239 SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTK 316 (977)
Q Consensus 239 ~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~ 316 (977)
....+|||||++|.+|.+... .....+...+...+.+++ +..+|..|++|||+||+|||++.+ +.++|+|||++.
T Consensus 68 ~~~~~lv~E~~~~g~L~~~i~-~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivHrDlkp~Nil~~~~--~~~kl~Dfg~~~ 144 (316)
T cd05620 68 KEHLFFVMEFLNGGDLMFHIQ-DKGRFDLYRATFYAAEIVCGLQFLHSKGIIYRDLKLDNVMLDRD--GHIKIADFGMCK 144 (316)
T ss_pred CCEEEEEECCCCCCcHHHHHH-HcCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHeEECCC--CCEEeCccCCCe
Confidence 355689999999998876532 222345555444444444 788999999999999999999865 899999999876
Q ss_pred c
Q 002031 317 K 317 (977)
Q Consensus 317 ~ 317 (977)
.
T Consensus 145 ~ 145 (316)
T cd05620 145 E 145 (316)
T ss_pred e
Confidence 4
|
Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. I |
| >cd07871 STKc_PCTAIRE3 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase | Back alignment and domain information |
|---|
Probab=99.29 E-value=8.6e-12 Score=138.07 Aligned_cols=139 Identities=16% Similarity=0.136 Sum_probs=89.1
Q ss_pred cccccccccEEEEEEec-CCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCcHHHH
Q 002031 124 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (977)
Q Consensus 124 ~piasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea 202 (977)
+.||.|++|.||+|+.+ +|+.||||+.+...... ....+.+|.
T Consensus 11 ~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~------------------------------------~~~~~~~E~ 54 (288)
T cd07871 11 DKLGEGTYATVFKGRSKLTENLVALKEIRLEHEEG------------------------------------APCTAIREV 54 (288)
T ss_pred eEEecCCCEEEEEEEECCCCCEEEEEEecccccCC------------------------------------cchhHHHHH
Confidence 57999999999999975 78999999875321100 001233455
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeee-cCCceEEeeccCCCCCCChHHHHhcCCCHHHHHHHHHHHH--H
Q 002031 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--A 279 (977)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~--l 279 (977)
+.+.++.+ ..-+.+-.++. ....++||||++| +|.+.............+...+.++. +
T Consensus 55 ~~l~~l~h-----------------~niv~~~~~~~~~~~~~lv~e~~~~-~l~~~l~~~~~~~~~~~~~~~~~qi~~aL 116 (288)
T cd07871 55 SLLKNLKH-----------------ANIVTLHDIIHTERCLTLVFEYLDS-DLKQYLDNCGNLMSMHNVKIFMFQLLRGL 116 (288)
T ss_pred HHHHhCCC-----------------CCEeeEEEEEcCCCeEEEEEeCCCc-CHHHHHHhcCCCCCHHHHHHHHHHHHHHH
Confidence 55444422 11122222222 3446899999987 66554322222234444444333433 7
Q ss_pred HHHHhcCccccCCCCCCeEEccCCCCceEEEeccccccc
Q 002031 280 HQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKL 318 (977)
Q Consensus 280 ~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l 318 (977)
..+|..|++|+|+||.|||++.+ +.++|+|||++...
T Consensus 117 ~~LH~~~ivH~dlkp~Nil~~~~--~~~kl~DfG~~~~~ 153 (288)
T cd07871 117 SYCHKRKILHRDLKPQNLLINEK--GELKLADFGLARAK 153 (288)
T ss_pred HHHHhCCcccCCCCHHHEEECCC--CCEEECcCcceeec
Confidence 78999999999999999999865 89999999998754
|
Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filament |
| >cd05115 PTKc_Zap-70 Catalytic domain of the Protein Tyrosine Kinase, Zeta-chain-associated protein of 70kDa | Back alignment and domain information |
|---|
Probab=99.29 E-value=1.5e-11 Score=133.75 Aligned_cols=139 Identities=22% Similarity=0.258 Sum_probs=95.4
Q ss_pred cccccccEEEEEEec---CCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCcHHHH
Q 002031 126 LATASIAQVHRATLV---DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (977)
Q Consensus 126 iasaSigqV~~A~l~---~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea 202 (977)
||.|++|.||+|+++ ++..||||+..+........ +|.+|+
T Consensus 3 ig~G~~g~v~~~~~~~~~~~~~vavk~~~~~~~~~~~~------------------------------------~~~~E~ 46 (257)
T cd05115 3 LGSGNFGCVKKGVYKMRKKQIDVAIKVLKNENEKSVRD------------------------------------EMMREA 46 (257)
T ss_pred cCCCCcccEEEEEEecCCCceeEEEEEcccccChHHHH------------------------------------HHHHHH
Confidence 899999999999864 45679999876543211110 234455
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeeecCCceEEeeccCCCCCCChHHHHhcCCCHHHHHHHHHHHH--HH
Q 002031 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQSSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--AH 280 (977)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~--l~ 280 (977)
..+.++.+ ..-+.+..+......++||||++|.+|.+........++...+...+.++. +.
T Consensus 47 ~~l~~l~h-----------------~~ii~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~ 109 (257)
T cd05115 47 EIMHQLDN-----------------PYIVRMIGVCEAEALMLVMEMASGGPLNKFLSGKKDEITVSNVVELMHQVSMGMK 109 (257)
T ss_pred HHHHhcCC-----------------CCeEEEEEEEcCCCeEEEEEeCCCCCHHHHHHhCCCCCCHHHHHHHHHHHHHHHH
Confidence 55544422 112233333334567899999999999876543333456666666555544 67
Q ss_pred HHHhcCccccCCCCCCeEEccCCCCceEEEecccccccC
Q 002031 281 QIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 319 (977)
Q Consensus 281 ~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~ 319 (977)
.+|..|++|+|+||.||+++.+ +.++|+|||++..+.
T Consensus 110 ~lH~~~i~H~dlkp~nil~~~~--~~~kl~dfg~~~~~~ 146 (257)
T cd05115 110 YLEGKNFVHRDLAARNVLLVNQ--HYAKISDFGLSKALG 146 (257)
T ss_pred HHHhcCeeecccchheEEEcCC--CcEEeccCCcccccc
Confidence 8899999999999999999865 889999999987654
|
Protein Tyrosine Kinase (PTK) family; Zeta-chain-associated protein of 70kDa (Zap-70); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Zap-70 is a member of the Syk subfamily of kinases, which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Zap-70 binds the phosphorylated ITAM (immunoreceptor tyr activation motif) sequences of the activated TCR zeta-chain through its SH2 domains, leading to its pho |
| >cd05604 STKc_SGK3 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 3 | Back alignment and domain information |
|---|
Probab=99.29 E-value=1.8e-11 Score=137.99 Aligned_cols=76 Identities=18% Similarity=0.218 Sum_probs=57.5
Q ss_pred cCCceEEeeccCCCCCCChHHHHhcCCCHHHHHHHHHHHH--HHHHHhcCccccCCCCCCeEEccCCCCceEEEeccccc
Q 002031 239 SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTK 316 (977)
Q Consensus 239 ~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~ 316 (977)
....+|||||++|.+|.+... ....+....+...+.+++ +..+|..|++|||+||+|||++.+ +.++|+|||++.
T Consensus 68 ~~~~~lv~e~~~~~~L~~~l~-~~~~~~~~~~~~~~~qi~~al~~lH~~givH~Dlkp~NIll~~~--~~~kL~DfG~~~ 144 (325)
T cd05604 68 TEKLYFVLDFVNGGELFFHLQ-RERSFPEPRARFYAAEIASALGYLHSINIVYRDLKPENILLDSQ--GHVVLTDFGLCK 144 (325)
T ss_pred CCEEEEEEcCCCCCCHHHHHH-HcCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCHHHeEECCC--CCEEEeecCCcc
Confidence 456789999999998865532 222344444444444433 788999999999999999999865 899999999986
Q ss_pred c
Q 002031 317 K 317 (977)
Q Consensus 317 ~ 317 (977)
.
T Consensus 145 ~ 145 (325)
T cd05604 145 E 145 (325)
T ss_pred c
Confidence 5
|
Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGK3 is expressed in most tissues and is most abundant in the embryo and adult heart and spleen. It was originally discovered in a screen for antiapoptotic genes. It phosphorylates and inhibits the proapoptotic proteins, Bad and FKHRL1. SGK3 also regulates many transporters, ion channels, |
| >cd05573 STKc_ROCK_NDR_like Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.29 E-value=7.4e-12 Score=142.43 Aligned_cols=140 Identities=19% Similarity=0.198 Sum_probs=93.1
Q ss_pred cccccccccEEEEEEec-CCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCcHHHH
Q 002031 124 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (977)
Q Consensus 124 ~piasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea 202 (977)
+.||.|++|+||+|+.. +|+.||||+.+....... .+ .-.+..|.
T Consensus 7 ~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~-~~---------------------------------~~~~~~e~ 52 (350)
T cd05573 7 KVIGRGAFGEVWLVRDKDTGQVYAMKVLRKSDMIKR-NQ---------------------------------IAHVRAER 52 (350)
T ss_pred EEEEeCCcEEEEEEEECCCCCEEEEEEEEHHHHhhc-cH---------------------------------HHHHHHHH
Confidence 56999999999999975 799999998764211000 00 00123333
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceee---e-cCCceEEeeccCCCCCCChHHHHhcCCCHHHHHHHHHHHH
Q 002031 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVI---Q-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY 278 (977)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~---~-~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~ 278 (977)
..+..+.+ -.|++++ . ....++||||++|.+|.++.... ..++...+...+.+++
T Consensus 53 ~~l~~~~~--------------------~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~-~~l~~~~~~~i~~qi~ 111 (350)
T cd05573 53 DILADADS--------------------PWIVKLYYSFQDEEHLYLVMEYMPGGDLMNLLIRK-DVFPEETARFYIAELV 111 (350)
T ss_pred HHHHhcCC--------------------CCccchhhheecCCeEEEEEcCCCCCCHHHHHHHc-CCCCHHHHHHHHHHHH
Confidence 33333221 1122222 2 35568999999999988764322 3455555444444443
Q ss_pred --HHHHHhcCccccCCCCCCeEEccCCCCceEEEecccccccCH
Q 002031 279 --AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 320 (977)
Q Consensus 279 --l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 320 (977)
+..+|..|++|+|+||.|||++.+ +.++|+|||++..+..
T Consensus 112 ~aL~~LH~~giiH~Dlkp~NIll~~~--~~~kL~Dfg~~~~~~~ 153 (350)
T cd05573 112 LALDSVHKLGFIHRDIKPDNILIDAD--GHIKLADFGLCKKMNK 153 (350)
T ss_pred HHHHHHHHCCeeccCCCHHHeEECCC--CCEEeecCCCCccCcc
Confidence 889999999999999999999865 8999999999887654
|
Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the |
| >cd05599 STKc_NDR_like Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.29 E-value=9.3e-12 Score=142.61 Aligned_cols=140 Identities=16% Similarity=0.183 Sum_probs=93.1
Q ss_pred cccccccccEEEEEEec-CCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCcHHHH
Q 002031 124 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (977)
Q Consensus 124 ~piasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea 202 (977)
+.||.|++|.||+|+.+ +|+.||||+.+..-. ...+ .. ..+.+|.
T Consensus 7 ~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~--~~~~--------------------------~~------~~~~~E~ 52 (364)
T cd05599 7 KVIGRGAFGEVRLVQKKDTGHIYAMKKLRKSEM--LEKE--------------------------QV------AHVRAER 52 (364)
T ss_pred EEEEecCCEEEEEEEECCCCCEEEEEEEEHHHh--hhhh--------------------------HH------HHHHHHH
Confidence 57999999999999974 799999998753100 0000 00 0122343
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceee---e-cCCceEEeeccCCCCCCChHHHHhcCCCHHHHHHHHHHHH
Q 002031 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVI---Q-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY 278 (977)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~---~-~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~ 278 (977)
..+..+.+ ..|+.++ . ....+|||||++|.+|.++.. ....+....+...+.+++
T Consensus 53 ~il~~l~h--------------------~~iv~~~~~~~~~~~~~lv~E~~~~g~L~~~l~-~~~~l~~~~~~~~~~qi~ 111 (364)
T cd05599 53 DILAEADN--------------------PWVVKLYYSFQDENYLYLIMEYLPGGDMMTLLM-KKDTFTEEETRFYIAETI 111 (364)
T ss_pred HHHHhCCC--------------------CCCcceEEEEEcCCeEEEEECCCCCcHHHHHHH-HcCCCCHHHHHHHHHHHH
Confidence 33333321 1222332 2 455789999999999877643 222345554444444444
Q ss_pred --HHHHHhcCccccCCCCCCeEEccCCCCceEEEecccccccCH
Q 002031 279 --AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 320 (977)
Q Consensus 279 --l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 320 (977)
+..+|..|++|||+||+|||++.+ +.++|+|||++..+..
T Consensus 112 ~aL~~lH~~~ivH~Dlkp~NIl~~~~--~~~kl~Dfg~~~~~~~ 153 (364)
T cd05599 112 LAIDSIHKLGYIHRDIKPDNLLLDAK--GHIKLSDFGLCTGLKK 153 (364)
T ss_pred HHHHHHHHCCeEeccCCHHHeEECCC--CCEEEeecccceeccc
Confidence 788999999999999999999865 8999999999877643
|
Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplica |
| >KOG0660 consensus Mitogen-activated protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.29 E-value=2.7e-12 Score=138.75 Aligned_cols=145 Identities=18% Similarity=0.228 Sum_probs=85.1
Q ss_pred ccccccccccEEEEEEe-cCCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCcHHH
Q 002031 123 ETPLATASIAQVHRATL-VDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSE 201 (977)
Q Consensus 123 ~~piasaSigqV~~A~l-~~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~E 201 (977)
.+|||.|++|.|..|+. ++|+.||||-.. +.+..-+. .++. .+|
T Consensus 27 ~~~iG~GAyGvVcsA~~~~t~~~VAIKKi~----~~F~~~~~-------------------------akRt------lRE 71 (359)
T KOG0660|consen 27 IEPIGRGAYGVVCSAKDKRTGEKVAIKKIL----NPFENQID-------------------------AKRT------LRE 71 (359)
T ss_pred cccccCcceeeEEEEEEcCCCCEeehhhhh----hhhhchHH-------------------------HHHH------HHH
Confidence 48999999999999997 589999999322 11111110 0011 123
Q ss_pred HHHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeee-cCCceEEeeccCCCCCCChHHHHhcC-CCHHHHHHHHHHHH-
Q 002031 202 AENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAFG-VNKQKVVEEITRAY- 278 (977)
Q Consensus 202 a~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLVmE~i~G~~L~~~~~~~~~~-~~~~~l~~~l~~~~- 278 (977)
.+-++++++. ++. ...++..|.... -.+-++|+|+++ ..|..+. +... +....+-.-+.+++
T Consensus 72 lklLr~~~He-----NIi-------~l~di~~p~~~~~f~DvYiV~elMe-tDL~~ii--k~~~~L~d~H~q~f~YQiLr 136 (359)
T KOG0660|consen 72 LKLLRHLRHE-----NII-------GLLDIFRPPSRDKFNDVYLVFELME-TDLHQII--KSQQDLTDDHAQYFLYQILR 136 (359)
T ss_pred HHHHHHhcCC-----Ccc-------eEEeecccccccccceeEEehhHHh-hHHHHHH--HcCccccHHHHHHHHHHHHH
Confidence 3444444320 000 011233332111 355689999995 3333332 2211 22222222222222
Q ss_pred -HHHHHhcCccccCCCCCCeEEccCCCCceEEEecccccccC
Q 002031 279 -AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 319 (977)
Q Consensus 279 -l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~ 319 (977)
++.||..|++|||+||+|++++.+ ..++++|||+++.++
T Consensus 137 gLKyiHSAnViHRDLKPsNll~n~~--c~lKI~DFGLAR~~~ 176 (359)
T KOG0660|consen 137 GLKYIHSANVIHRDLKPSNLLLNAD--CDLKICDFGLARYLD 176 (359)
T ss_pred hcchhhcccccccccchhheeeccC--CCEEeccccceeecc
Confidence 566778999999999999999966 789999999999995
|
|
| >cd05592 STKc_nPKC_theta_delta Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta | Back alignment and domain information |
|---|
Probab=99.28 E-value=1.1e-11 Score=139.21 Aligned_cols=77 Identities=17% Similarity=0.208 Sum_probs=58.6
Q ss_pred cCCceEEeeccCCCCCCChHHHHhcCCCHHHHHHHHHHHH--HHHHHhcCccccCCCCCCeEEccCCCCceEEEeccccc
Q 002031 239 SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTK 316 (977)
Q Consensus 239 ~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~ 316 (977)
....++||||++|.+|.+... ....++...+...+.+++ +..+|..|++|||+||.||+++.+ +.++|+|||++.
T Consensus 68 ~~~~~lv~e~~~gg~L~~~~~-~~~~~~~~~~~~~~~qi~~al~~LH~~~ivH~dlkp~Nill~~~--~~~kL~Dfg~a~ 144 (316)
T cd05592 68 KEHLFFVMEYLNGGDLMFHIQ-SSGRFDEARARFYAAEIICGLQFLHKKGIIYRDLKLDNVLLDKD--GHIKIADFGMCK 144 (316)
T ss_pred CCEEEEEEcCCCCCcHHHHHH-HcCCCCHHHHHHHHHHHHHHHHHHHHCCEEeCCCCHHHeEECCC--CCEEEccCcCCe
Confidence 345689999999999876533 222345555544444443 788999999999999999999865 899999999987
Q ss_pred cc
Q 002031 317 KL 318 (977)
Q Consensus 317 ~l 318 (977)
..
T Consensus 145 ~~ 146 (316)
T cd05592 145 EN 146 (316)
T ss_pred EC
Confidence 54
|
Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an imp |
| >COG1718 RIO1 Serine/threonine protein kinase involved in cell cycle control [Signal transduction mechanisms / Cell division and chromosome partitioning] | Back alignment and domain information |
|---|
Probab=99.28 E-value=4e-11 Score=125.12 Aligned_cols=185 Identities=20% Similarity=0.249 Sum_probs=125.7
Q ss_pred ccccccccEEEEEEecCCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhh-CCCCCCchhHHHHhhhcccccCcHHHHH
Q 002031 125 PLATASIAQVHRATLVDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWA-EPQYDFNPIIDEWCKEAPKELDFNSEAE 203 (977)
Q Consensus 125 piasaSigqV~~A~l~~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~-~~~~~~~~~~~e~~~~l~~Eld~~~Ea~ 203 (977)
+|.+|--+.||+|...++..|||||.+......-. ++....--..+ ....+...++..|. +.|.+
T Consensus 55 ~istGKEA~Vy~a~~~~~~~~avKiyr~~t~~fk~-----~~~Yi~gd~Rf~~~~~~rr~lv~~W~---------~kEf~ 120 (268)
T COG1718 55 CISTGKEANVYLAETGDGRYVAVKIYRTSTSEFKR-----IRRYIQGDPRFRNSRSNRRKLVFAWA---------RKEFR 120 (268)
T ss_pred eecCCcceEEEeeccCCCceEEEEEEehhhhhhhh-----HHHHHhcChhhhcCCCCHHHHHHHHH---------HHHHH
Confidence 78999999999999888999999999876543221 11111000000 11123334444444 57889
Q ss_pred HHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeeecCCceEEeeccCCCCCCChHHHHhcCC---CHHHHHHHHHHHHHH
Q 002031 204 NTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQSSETVLILEFMDGIRLNDCESLEAFGV---NKQKVVEEITRAYAH 280 (977)
Q Consensus 204 n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~~~~~vLVmE~i~G~~L~~~~~~~~~~~---~~~~l~~~l~~~~l~ 280 (977)
|+.++.+ .+|.||+++..-++||||||+... -...-.+...+. +...+.+.+++-.-.
T Consensus 121 NL~R~~e------------------AGVrvP~Pi~~~~nVLvMEfIg~~-g~pAP~LkDv~~e~~e~~~~~~~~v~~~~~ 181 (268)
T COG1718 121 NLKRAYE------------------AGVRVPEPIAFRNNVLVMEFIGDD-GLPAPRLKDVPLELEEAEGLYEDVVEYMRR 181 (268)
T ss_pred HHHHHHH------------------cCCCCCCceeecCCeEEEEeccCC-CCCCCCcccCCcCchhHHHHHHHHHHHHHH
Confidence 9999876 269999999999999999999543 111111222221 234455555555555
Q ss_pred HHHhcCccccCCCCCCeEEccCCCCceEEEecccccccCHHHHHHHHHHHHHHHcCCHHHHHHHHHHcCccc
Q 002031 281 QIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSSSMKQALAKMFFAAAEGDHVALLSAFAEMGLRL 352 (977)
Q Consensus 281 ~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~~~r~~~~~l~~a~~~~d~~~~~~~~~~~g~~~ 352 (977)
++...|++|+|+..-|||+. + +.+++||||.+....... ...++.+|...+...|...|+..
T Consensus 182 l~~~a~LVHgDLSEyNiL~~-~--~~p~iID~~QaV~~~hp~-------a~e~L~RDv~Ni~~fF~r~gv~~ 243 (268)
T COG1718 182 LYKEAGLVHGDLSEYNILVH-D--GEPYIIDVSQAVTIDHPN-------AFEFLERDVRNIARFFRRKGVEA 243 (268)
T ss_pred HHHhcCcccccchhhheEEE-C--CeEEEEECccccccCCCc-------hHHHHHHHHHHHHHHHHHcCCCC
Confidence 55569999999999999997 3 789999999998887533 23346789999999999999853
|
|
| >cd07878 STKc_p38beta_MAPK11 Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase | Back alignment and domain information |
|---|
Probab=99.28 E-value=1.3e-11 Score=140.14 Aligned_cols=157 Identities=20% Similarity=0.254 Sum_probs=96.2
Q ss_pred HHHhCCChhhcccccC-ccccccccccEEEEEEe-cCCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchh
Q 002031 107 EREFGESMGGMFMDFV-ETPLATASIAQVHRATL-VDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPI 184 (977)
Q Consensus 107 ~~elg~~~~~~f~~~d-~~piasaSigqV~~A~l-~~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~ 184 (977)
++|+++...++...+. .++||+|++|+||+|+. .+++.||||+.......... .+
T Consensus 3 ~~~~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~-----~~------------------ 59 (343)
T cd07878 3 RQELNKTVWEVPERYQNLTPVGSGAYGSVCSAYDTRLRQKVAVKKLSRPFQSLIH-----AR------------------ 59 (343)
T ss_pred HHHHhHHHhhhhhhhhhheecccCCCeEEEEEEECCCCCEEEEEEeCchhhhhHH-----HH------------------
Confidence 4455544444444444 37899999999999997 47899999987643211100 00
Q ss_pred HHHHhhhcccccCcHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceee-------ecCCceEEeeccCCCCCCCh
Q 002031 185 IDEWCKEAPKELDFNSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVI-------QSSETVLILEFMDGIRLNDC 257 (977)
Q Consensus 185 ~~e~~~~l~~Eld~~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~-------~~~~~vLVmE~i~G~~L~~~ 257 (977)
.+.+|.+.+.++.+. ..+.+..++ .....+++||++ |.+|.++
T Consensus 60 ------------~~~~E~~~l~~l~h~-----------------~iv~~~~~~~~~~~~~~~~~~~~~~~~~-~~~l~~~ 109 (343)
T cd07878 60 ------------RTYRELRLLKHMKHE-----------------NVIGLLDVFTPATSIENFNEVYLVTNLM-GADLNNI 109 (343)
T ss_pred ------------HHHHHHHHHHhcCCC-----------------chhhhhhhhcccccccccCcEEEEeecC-CCCHHHH
Confidence 011233333322110 000011111 023457999988 6666654
Q ss_pred HHHHhcCCCHHHHHHHHHHHH--HHHHHhcCccccCCCCCCeEEccCCCCceEEEecccccccCH
Q 002031 258 ESLEAFGVNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 320 (977)
Q Consensus 258 ~~~~~~~~~~~~l~~~l~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 320 (977)
. ....++...+...+.+++ +..+|..|++|+|+||+||+++.+ +.++|+|||++..++.
T Consensus 110 ~--~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrdikp~Nil~~~~--~~~kl~Dfg~~~~~~~ 170 (343)
T cd07878 110 V--KCQKLSDEHVQFLIYQLLRGLKYIHSAGIIHRDLKPSNVAVNED--CELRILDFGLARQADD 170 (343)
T ss_pred H--hcCCCCHHHHHHHHHHHHHHHHHHHHCCeecccCChhhEEECCC--CCEEEcCCccceecCC
Confidence 2 233455555555544444 778999999999999999999865 8999999999887654
|
Serine/Threonine Kinases (STKs), p38beta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38beta, also called MAPK11, is |
| >cd05629 STKc_NDR_like_fungal Catalytic domain of Fungal Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.28 E-value=1.5e-11 Score=141.78 Aligned_cols=140 Identities=16% Similarity=0.202 Sum_probs=92.1
Q ss_pred cccccccccEEEEEEe-cCCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCcHHHH
Q 002031 124 TPLATASIAQVHRATL-VDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (977)
Q Consensus 124 ~piasaSigqV~~A~l-~~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea 202 (977)
+.||+|++|.||+|+. .+|+.||||+....- ....+ . ++ .+.+|.
T Consensus 7 ~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~--~~~~~--~--------------------~~----------~~~~E~ 52 (377)
T cd05629 7 KVIGKGAFGEVRLVQKKDTGKIYAMKTLLKSE--MFKKD--Q--------------------LA----------HVKAER 52 (377)
T ss_pred EEEeecCCEEEEEEEECCCCCEEEEEEEEHHH--HHHhH--H--------------------HH----------HHHHHH
Confidence 5799999999999987 489999999864310 00000 0 00 123344
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeee----cCCceEEeeccCCCCCCChHHHHhcCCCHHHHHHHHHHHH
Q 002031 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ----SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY 278 (977)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~----~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~ 278 (977)
+.+.++.+ -.|++++. ....+|||||++|.+|.+... ....+....+...+.+++
T Consensus 53 ~il~~l~h--------------------p~iv~~~~~~~~~~~~~lv~E~~~gg~L~~~l~-~~~~~~~~~~~~~~~ql~ 111 (377)
T cd05629 53 DVLAESDS--------------------PWVVSLYYSFQDAQYLYLIMEFLPGGDLMTMLI-KYDTFSEDVTRFYMAECV 111 (377)
T ss_pred HHHHhCCC--------------------CCcceEEEEEEcCCeeEEEEeCCCCCcHHHHHH-hcCCCCHHHHHHHHHHHH
Confidence 44333221 12333332 456789999999999977643 222344444433333433
Q ss_pred --HHHHHhcCccccCCCCCCeEEccCCCCceEEEecccccccCH
Q 002031 279 --AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 320 (977)
Q Consensus 279 --l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 320 (977)
+..+|..|++|||+||.|||++.+ +.++|+|||+++.+..
T Consensus 112 ~aL~~LH~~givHrDlkp~NIll~~~--~~~kl~DfGla~~~~~ 153 (377)
T cd05629 112 LAIEAVHKLGFIHRDIKPDNILIDRG--GHIKLSDFGLSTGFHK 153 (377)
T ss_pred HHHHHHHhCCeeccCCCHHHEEECCC--CCEEEeeccccccccc
Confidence 788999999999999999999865 8999999999976643
|
Serine/Threonine Kinases (STKs), NDR kinase subfamily, fungal NDR-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group is composed of fungal NDR-like proteins including Saccharomyces cerevisiae CBK1 (or CBK1p), Schizosaccharomyces pombe Orb6 (or Orb6p), Ustilago maydis Ukc1 (or Ukc1p), and Neurospora crassa Cot1. Like NDR kinase, group members contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. CBK1 is an essential component in the RAM (regulation of |
| >cd05602 STKc_SGK1 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 1 | Back alignment and domain information |
|---|
Probab=99.28 E-value=2e-11 Score=137.62 Aligned_cols=77 Identities=17% Similarity=0.169 Sum_probs=57.0
Q ss_pred cCCceEEeeccCCCCCCChHHHHhcCCCHHHHHHHHHHHH--HHHHHhcCccccCCCCCCeEEccCCCCceEEEeccccc
Q 002031 239 SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTK 316 (977)
Q Consensus 239 ~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~ 316 (977)
....++||||++|.+|.+.... ...+....+...+.+++ +..+|..|++|||+||+|||++.+ +.++|+|||++.
T Consensus 68 ~~~~~lv~e~~~~~~L~~~~~~-~~~~~~~~~~~~~~qi~~~L~~lH~~giiHrDlkp~Nili~~~--~~~kl~DfG~a~ 144 (325)
T cd05602 68 ADKLYFVLDYINGGELFYHLQR-ERCFLEPRARFYAAEIASALGYLHSLNIVYRDLKPENILLDSQ--GHIVLTDFGLCK 144 (325)
T ss_pred CCeEEEEEeCCCCCcHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHeEECCC--CCEEEccCCCCc
Confidence 4556899999999988765432 22333333333333333 778999999999999999999865 899999999987
Q ss_pred cc
Q 002031 317 KL 318 (977)
Q Consensus 317 ~l 318 (977)
..
T Consensus 145 ~~ 146 (325)
T cd05602 145 EN 146 (325)
T ss_pred cc
Confidence 54
|
Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK1 is ubiquitously expressed and is under transcriptional control of numerous stimuli including cell stress (cell shrinkage), serum, hormones (gluco- and mineralocorticoids), gonadotropins, growth factors, interleukin-6, and other cytokines. It plays roles in sodium retention and potassium elimination in the kidney, nutrient transport, salt |
| >cd05622 STKc_ROCK1 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 1 | Back alignment and domain information |
|---|
Probab=99.28 E-value=1.5e-11 Score=141.50 Aligned_cols=142 Identities=18% Similarity=0.170 Sum_probs=92.0
Q ss_pred cccccccccEEEEEEec-CCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCcHHHH
Q 002031 124 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (977)
Q Consensus 124 ~piasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea 202 (977)
+.||.|++|.||+|+.+ +++.||+|+....-.. -..+. -.+.+|.
T Consensus 49 ~~lG~G~fg~Vy~~~~~~~~~~~aiK~i~~~~~~-~~~~~---------------------------------~~~~~e~ 94 (371)
T cd05622 49 KVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMI-KRSDS---------------------------------AFFWEER 94 (371)
T ss_pred EEEeecCCeEEEEEEECCCCcEEEEEEEEHHHhh-hhHHH---------------------------------HHHHHHH
Confidence 67999999999999985 7899999987431000 00000 0122333
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeee-cCCceEEeeccCCCCCCChHHHHhcCCCHHHHHHHHHHHH--H
Q 002031 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--A 279 (977)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~--l 279 (977)
..+..+.+ ...+.+-..+. ....++||||++|.+|.++. ....++...+...+.+++ +
T Consensus 95 ~i~~~~~h-----------------p~iv~~~~~~~~~~~~~lv~Ey~~gg~L~~~~--~~~~~~~~~~~~~~~qi~~aL 155 (371)
T cd05622 95 DIMAFANS-----------------PWVVQLFYAFQDDRYLYMVMEYMPGGDLVNLM--SNYDVPEKWARFYTAEVVLAL 155 (371)
T ss_pred HHHHhCCC-----------------CCCCeEEEEEEcCCEEEEEEcCCCCCcHHHHH--HhcCCCHHHHHHHHHHHHHHH
Confidence 33332211 01112222222 35568999999999998764 333455444444344433 7
Q ss_pred HHHHhcCccccCCCCCCeEEccCCCCceEEEecccccccCH
Q 002031 280 HQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 320 (977)
Q Consensus 280 ~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 320 (977)
..+|..|++||||||.|||++.+ +.++|+|||++..+..
T Consensus 156 ~~LH~~~ivHrDLkp~NIll~~~--~~ikL~DfG~a~~~~~ 194 (371)
T cd05622 156 DAIHSMGFIHRDVKPDNMLLDKS--GHLKLADFGTCMKMNK 194 (371)
T ss_pred HHHHHCCEEeCCCCHHHEEECCC--CCEEEEeCCceeEcCc
Confidence 88999999999999999999865 8999999999887653
|
Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK1 (or ROK-beta) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK1 is preferentially expressed in the liver, lung, spleen, testes, an |
| >cd05596 STKc_ROCK Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase | Back alignment and domain information |
|---|
Probab=99.28 E-value=1e-11 Score=142.89 Aligned_cols=141 Identities=17% Similarity=0.170 Sum_probs=92.1
Q ss_pred cccccccccEEEEEEec-CCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCcHHHH
Q 002031 124 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (977)
Q Consensus 124 ~piasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea 202 (977)
+.||.|++|.||+|+.+ +|+.||||+........ .. ..-.+..|.
T Consensus 49 ~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~-~~---------------------------------~~~~~~~e~ 94 (370)
T cd05596 49 KVIGRGAFGEVQLVRHKSSKQVYAMKLLSKFEMIK-RS---------------------------------DSAFFWEER 94 (370)
T ss_pred EEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhh-hh---------------------------------hHHHHHHHH
Confidence 67999999999999974 78999999875310000 00 000122343
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeee-cCCceEEeeccCCCCCCChHHHHhcCCCHHHHHHHHHHHH--H
Q 002031 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--A 279 (977)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~--l 279 (977)
..+..+.+ ...+.+...+. ....+|||||++|++|.++. ....+....+...+.+++ +
T Consensus 95 ~il~~~~h-----------------~~iv~~~~~~~~~~~~~lv~Ey~~gg~L~~~l--~~~~l~~~~~~~~~~qi~~aL 155 (370)
T cd05596 95 DIMAHANS-----------------EWIVQLHYAFQDDKYLYMVMEYMPGGDLVNLM--SNYDIPEKWARFYTAEVVLAL 155 (370)
T ss_pred HHHHhCCC-----------------CCcceEEEEEecCCEEEEEEcCCCCCcHHHHH--HhcCCCHHHHHHHHHHHHHHH
Confidence 33333211 01122222222 34568999999999998763 333445444444444433 7
Q ss_pred HHHHhcCccccCCCCCCeEEccCCCCceEEEecccccccC
Q 002031 280 HQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 319 (977)
Q Consensus 280 ~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~ 319 (977)
..+|..|++|||+||.|||++.+ +.++|+|||++..+.
T Consensus 156 ~~LH~~~ivHrDLkp~NILl~~~--~~~kL~DfG~~~~~~ 193 (370)
T cd05596 156 DAIHSMGFIHRDVKPDNMLLDKS--GHLKLADFGTCMKMD 193 (370)
T ss_pred HHHHHCCeeccCCCHHHEEEcCC--CCEEEEeccceeecc
Confidence 88999999999999999999865 899999999987664
|
Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK is also referred to as Rho-associated kinase or simply as Rho kinase. It contains an N-terminal extension, a catalytic kinase domain, and a long C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain. It is activated via in |
| >cd05616 STKc_cPKC_beta Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C beta | Back alignment and domain information |
|---|
Probab=99.28 E-value=1.3e-11 Score=139.00 Aligned_cols=139 Identities=14% Similarity=0.130 Sum_probs=90.4
Q ss_pred cccccccccEEEEEEec-CCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCcHHHH
Q 002031 124 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (977)
Q Consensus 124 ~piasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea 202 (977)
+.||+|++|.||+|+.+ +++.||||+.+...... ..+. ..+..|.
T Consensus 6 ~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~-~~~~---------------------------------~~~~~e~ 51 (323)
T cd05616 6 MVLGKGSFGKVMLAERKGTDELYAIKILKKDVVIQ-DDDV---------------------------------ECTMVEK 51 (323)
T ss_pred EEEeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhh-hhHH---------------------------------HHHHHHH
Confidence 56999999999999975 68899999876532100 0000 0112222
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceee---e-cCCceEEeeccCCCCCCChHHHHhcCCCHHHHHHHHHHHH
Q 002031 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVI---Q-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY 278 (977)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~---~-~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~ 278 (977)
+.+....+ + -.|+.++ . ....+|||||++|.+|.+... ....++...+...+.+++
T Consensus 52 ~~l~~~~~-----------------~--~~i~~~~~~~~~~~~~~lv~E~~~~g~L~~~~~-~~~~~~~~~~~~~~~qi~ 111 (323)
T cd05616 52 RVLALSGK-----------------P--PFLTQLHSCFQTMDRLYFVMEYVNGGDLMYQIQ-QVGRFKEPHAVFYAAEIA 111 (323)
T ss_pred HHHHhccC-----------------C--CeEeeEEEEEecCCEEEEEEcCCCCCCHHHHHH-HcCCCCHHHHHHHHHHHH
Confidence 22222110 1 1233332 2 344689999999998876532 222345555555555544
Q ss_pred --HHHHHhcCccccCCCCCCeEEccCCCCceEEEeccccccc
Q 002031 279 --AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKL 318 (977)
Q Consensus 279 --l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l 318 (977)
+..+|..|++|+|+||+|||++.+ +.++|+|||++...
T Consensus 112 ~aL~~LH~~~ivHrDlkp~Nill~~~--~~~kL~DfG~~~~~ 151 (323)
T cd05616 112 IGLFFLHSKGIIYRDLKLDNVMLDSE--GHIKIADFGMCKEN 151 (323)
T ss_pred HHHHHHHHCCEEecCCCHHHeEECCC--CcEEEccCCCceec
Confidence 778999999999999999999865 89999999998754
|
Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, beta isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and |
| >cd05575 STKc_SGK Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase | Back alignment and domain information |
|---|
Probab=99.28 E-value=2.3e-11 Score=137.12 Aligned_cols=77 Identities=17% Similarity=0.179 Sum_probs=57.7
Q ss_pred cCCceEEeeccCCCCCCChHHHHhcCCCHHHHHHHHHHHH--HHHHHhcCccccCCCCCCeEEccCCCCceEEEeccccc
Q 002031 239 SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTK 316 (977)
Q Consensus 239 ~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~ 316 (977)
....++||||++|.+|.+.... ...+....+...+.+++ +..+|..|++|||+||.|||++.+ +.++|+|||++.
T Consensus 68 ~~~~~lv~e~~~~g~L~~~l~~-~~~~~~~~~~~~~~qi~~~l~~lH~~givH~dikp~NIll~~~--~~~kl~Dfg~~~ 144 (323)
T cd05575 68 ADKLYFVLDYVNGGELFFHLQR-ERSFPEPRARFYAAEIASALGYLHSLNIIYRDLKPENILLDSQ--GHVVLTDFGLCK 144 (323)
T ss_pred CCEEEEEEcCCCCCCHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHCCeEeCCCCHHHeEECCC--CcEEEeccCCCc
Confidence 4556899999999998765332 22344444444444433 788999999999999999999865 899999999986
Q ss_pred cc
Q 002031 317 KL 318 (977)
Q Consensus 317 ~l 318 (977)
..
T Consensus 145 ~~ 146 (323)
T cd05575 145 EG 146 (323)
T ss_pred cc
Confidence 53
|
Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell pr |
| >KOG0591 consensus NIMA (never in mitosis)-related G2-specific serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=99.27 E-value=2.1e-12 Score=134.37 Aligned_cols=143 Identities=20% Similarity=0.199 Sum_probs=90.3
Q ss_pred cccccccccEEEEEEe-cCCCEEEEEE-ecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCcHHH
Q 002031 124 TPLATASIAQVHRATL-VDGRQVVVKV-QHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSE 201 (977)
Q Consensus 124 ~piasaSigqV~~A~l-~~G~~VAVKv-~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~E 201 (977)
+.||.||||.||+++. .+|..||.|- +.-.+...-..| +..|++..+.
T Consensus 25 ~~IG~GsFg~vykv~~~~~g~l~a~K~i~f~~md~k~rq~------------------------------~v~Ei~lLkQ 74 (375)
T KOG0591|consen 25 KKIGRGSFGEVYKVQCLLDGKLVALKKIQFGMMDAKARQD------------------------------CVKEISLLKQ 74 (375)
T ss_pred HHHcCCcchheEEeeeccCcchhhhhhcchhhccHHHHHH------------------------------HHHHHHHHHh
Confidence 5699999999999985 6999999983 332222222222 2223333333
Q ss_pred HH--HHHHHHH-HhCCCCCCCCCCCCCCCCCCeEeceeeecCC-ceEEeeccCCCCCCChHHHH---hcCCCHHHHHHHH
Q 002031 202 AE--NTRIVSA-NLGCKNKHEDSNKKPAYEVDVLIPEVIQSSE-TVLILEFMDGIRLNDCESLE---AFGVNKQKVVEEI 274 (977)
Q Consensus 202 a~--n~~~~~~-~~~~~~~~~~~~~~~~~~~~v~vP~v~~~~~-~vLVmE~i~G~~L~~~~~~~---~~~~~~~~l~~~l 274 (977)
.+ |+.++.+ .|.. ..+ -.||||+++++.|+....-- ..-+..+.+-..+
T Consensus 75 L~HpNIVqYy~~~f~~------------------------~~evlnivmE~c~~GDLsqmIk~~K~qkr~ipE~~Vwk~f 130 (375)
T KOG0591|consen 75 LNHPNIVQYYAHSFIE------------------------DNEVLNIVMELCDAGDLSQMIKHFKKQKRLIPEKTVWKYF 130 (375)
T ss_pred cCCchHHHHHHHhhhc------------------------cchhhHHHHHhhcccCHHHHHHHHHhccccCchHHHHHHH
Confidence 22 3333332 2210 112 35899999999998875421 1223344455555
Q ss_pred HHHH--HHHHHh--cC--ccccCCCCCCeEEccCCCCceEEEecccccccCHHH
Q 002031 275 TRAY--AHQIYV--DG--FFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSSSM 322 (977)
Q Consensus 275 ~~~~--l~~i~~--~G--~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~~~ 322 (977)
++++ +...|. .. ++||||||+||+++.. |.++|-|||+.+.++.+.
T Consensus 131 ~QL~~AL~~cH~~~~r~~VmHRDIKPaNIFl~~~--gvvKLGDfGL~r~l~s~~ 182 (375)
T KOG0591|consen 131 VQLCRALYHCHSKIPRGTVMHRDIKPANIFLTAN--GVVKLGDFGLGRFLSSKT 182 (375)
T ss_pred HHHHHHHHHHhccccccceeeccCcchheEEcCC--CceeeccchhHhHhcchh
Confidence 5544 444444 33 9999999999999955 899999999999887654
|
|
| >cd05608 STKc_GRK1 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1 | Back alignment and domain information |
|---|
Probab=99.27 E-value=1.4e-11 Score=135.87 Aligned_cols=142 Identities=16% Similarity=0.156 Sum_probs=91.6
Q ss_pred cccccccEEEEEEec-CCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCcHHHHHH
Q 002031 126 LATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEAEN 204 (977)
Q Consensus 126 iasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea~n 204 (977)
||.|++|.||++..+ +|+.||||+......... .+ + -.+..|.+.
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~-~~-----------------------~----------~~~~~E~~i 46 (280)
T cd05608 1 LGKGGFGEVSACQMRATGKLYACKKLNKKRLKKR-KG-----------------------Y----------EGAMVEKRI 46 (280)
T ss_pred CCCCCceeEEEEEEccCCcEEEEEeeeHHHHhhh-HH-----------------------H----------HHHHHHHHH
Confidence 689999999999974 799999998643211000 00 0 013345444
Q ss_pred HHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeee-cCCceEEeeccCCCCCCChHHH---HhcCCCHHHHHHHHHHHH--
Q 002031 205 TRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESL---EAFGVNKQKVVEEITRAY-- 278 (977)
Q Consensus 205 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLVmE~i~G~~L~~~~~~---~~~~~~~~~l~~~l~~~~-- 278 (977)
+..+.+ ...+.+-..+. ....+|||||++|.+|.+.... ....++...+...+.+++
T Consensus 47 l~~l~~-----------------~~i~~~~~~~~~~~~~~lv~e~~~~g~L~~~~~~~~~~~~~l~~~~~~~~~~qi~~~ 109 (280)
T cd05608 47 LAKVHS-----------------RFIVSLAYAFQTKTDLCLVMTIMNGGDLRYHIYNVDEENPGFPEPRACFYTAQIISG 109 (280)
T ss_pred HHhCCC-----------------CcEeeeeEEEcCCCeEEEEEeCCCCCCHHHHHHhccccCCCCCHHHHHHHHHHHHHH
Confidence 444321 11122222222 4556899999999998765321 112344555555444444
Q ss_pred HHHHHhcCccccCCCCCCeEEccCCCCceEEEecccccccCH
Q 002031 279 AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 320 (977)
Q Consensus 279 l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 320 (977)
+..+|..|++|+|+||.||+++.+ +.++|+|||++..+..
T Consensus 110 l~~lH~~~i~H~dlkp~Nili~~~--~~~~l~dfg~~~~~~~ 149 (280)
T cd05608 110 LEHLHQRRIIYRDLKPENVLLDND--GNVRISDLGLAVELKD 149 (280)
T ss_pred HHHHHHCCcccCCCCHHHEEECCC--CCEEEeeCccceecCC
Confidence 788999999999999999999855 8899999999876643
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual g |
| >KOG1187 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.27 E-value=6.4e-12 Score=142.87 Aligned_cols=142 Identities=22% Similarity=0.231 Sum_probs=98.7
Q ss_pred ccCc-cccccccccEEEEEEecCCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCc
Q 002031 120 DFVE-TPLATASIAQVHRATLVDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDF 198 (977)
Q Consensus 120 ~~d~-~piasaSigqV~~A~l~~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~ 198 (977)
.|+. .-||.|+||.||+|.+.+|+.||||...+..... +.+|
T Consensus 76 ~Fs~~~~ig~Ggfg~VYkG~l~~~~~vAVK~~~~~~~~~-------------------------------------~~eF 118 (361)
T KOG1187|consen 76 NFSESNLIGEGGFGTVYKGVLSDGTVVAVKRLSSNSGQG-------------------------------------EREF 118 (361)
T ss_pred CCchhcceecCCCeEEEEEEECCCCEEEEEEecCCCCcc-------------------------------------hhHH
Confidence 4543 6799999999999999999999999665432210 2236
Q ss_pred HHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeeec---C-CceEEeeccCCCCCCChHHHHhc-CCCHH---HH
Q 002031 199 NSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQS---S-ETVLILEFMDGIRLNDCESLEAF-GVNKQ---KV 270 (977)
Q Consensus 199 ~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~~---~-~~vLVmE~i~G~~L~~~~~~~~~-~~~~~---~l 270 (977)
.+|...+.+++|. -.|.-+-.| . .++||.||++.++|.+....... .++-. +|
T Consensus 119 ~~Ei~~ls~l~H~-------------------Nlv~LlGyC~e~~~~~~LVYEym~nGsL~d~L~~~~~~~L~W~~R~kI 179 (361)
T KOG1187|consen 119 LNEVEILSRLRHP-------------------NLVKLLGYCLEGGEHRLLVYEYMPNGSLEDHLHGKKGEPLDWETRLKI 179 (361)
T ss_pred HHHHHHHhcCCCc-------------------CcccEEEEEecCCceEEEEEEccCCCCHHHHhCCCCCCCCCHHHHHHH
Confidence 7777777776531 112222222 4 48999999999999877432222 23322 34
Q ss_pred HHHHHHHHHHHHHhcC---ccccCCCCCCeEEccCCCCceEEEecccccccCH
Q 002031 271 VEEITRAYAHQIYVDG---FFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 320 (977)
Q Consensus 271 ~~~l~~~~l~~i~~~G---~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 320 (977)
+..+++. +..+|... ++|||+||.|||+|.+ .+.+|.|||+++..+.
T Consensus 180 a~g~A~g-L~yLH~~~~~~iiHrDiKssNILLD~~--~~aKlsDFGLa~~~~~ 229 (361)
T KOG1187|consen 180 ALGAARG-LAYLHEGCPPPIIHRDIKSSNILLDED--FNAKLSDFGLAKLGPE 229 (361)
T ss_pred HHHHHHH-HHHHccCCCCCEecCCCCHHHeeECCC--CCEEccCccCcccCCc
Confidence 4444444 77788744 9999999999999965 9999999999976654
|
|
| >cd05603 STKc_SGK2 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 2 | Back alignment and domain information |
|---|
Probab=99.27 E-value=2.2e-11 Score=136.98 Aligned_cols=76 Identities=17% Similarity=0.197 Sum_probs=56.6
Q ss_pred cCCceEEeeccCCCCCCChHHHHhcCCCHHHHHHHHHHHH--HHHHHhcCccccCCCCCCeEEccCCCCceEEEeccccc
Q 002031 239 SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTK 316 (977)
Q Consensus 239 ~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~ 316 (977)
....++||||++|.+|.+... ....+....+...+.++. +..+|..|++|+|+||.||+++.+ +.++|+|||++.
T Consensus 68 ~~~~~lv~e~~~~~~L~~~l~-~~~~~~~~~~~~~~~qi~~~L~~lH~~~ivH~Dlkp~NIll~~~--~~~kl~Dfg~~~ 144 (321)
T cd05603 68 AEKLYFVLDYVNGGELFFHLQ-RERCFLEPRARFYAAEVASAIGYLHSLNIIYRDLKPENILLDSQ--GHVVLTDFGLCK 144 (321)
T ss_pred CCEEEEEEcCCCCCCHHHHHH-HcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeccCCHHHeEECCC--CCEEEccCCCCc
Confidence 455689999999998865432 122344444444333433 788999999999999999999865 899999999987
Q ss_pred c
Q 002031 317 K 317 (977)
Q Consensus 317 ~ 317 (977)
.
T Consensus 145 ~ 145 (321)
T cd05603 145 E 145 (321)
T ss_pred c
Confidence 5
|
Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK2 shows a more restricted distribution that SGK1 and is most abundantly expressed in epithelial tissues including kidney, liver, pancreas, and the choroid plexus of the brain. In vitro cellular assays show that SGK2 can stimulate the activity of ion channels, the glutamate transporter EEAT4, and the glutamate receptors, GluR6 and GLUR1. |
| >cd05618 STKc_aPKC_iota Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C iota | Back alignment and domain information |
|---|
Probab=99.27 E-value=1.9e-11 Score=138.20 Aligned_cols=76 Identities=16% Similarity=0.192 Sum_probs=57.7
Q ss_pred cCCceEEeeccCCCCCCChHHHHhcCCCHHHHHHHHHHHH--HHHHHhcCccccCCCCCCeEEccCCCCceEEEeccccc
Q 002031 239 SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTK 316 (977)
Q Consensus 239 ~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~ 316 (977)
....+|||||++|.+|.+... ....+....+...+.++. +..+|..|++|||+||.||+++.+ +.++|+|||++.
T Consensus 68 ~~~~~lv~E~~~~~~L~~~~~-~~~~l~~~~~~~i~~qi~~~l~~lH~~~ivH~Dikp~Nili~~~--~~~kL~DfG~~~ 144 (329)
T cd05618 68 ESRLFFVIEYVNGGDLMFHMQ-RQRKLPEEHARFYSAEISLALNYLHERGIIYRDLKLDNVLLDSE--GHIKLTDYGMCK 144 (329)
T ss_pred CCEEEEEEeCCCCCCHHHHHH-HcCCCCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCHHHEEECCC--CCEEEeeCCccc
Confidence 456789999999998865532 223345444444444433 788999999999999999999865 899999999986
Q ss_pred c
Q 002031 317 K 317 (977)
Q Consensus 317 ~ 317 (977)
.
T Consensus 145 ~ 145 (329)
T cd05618 145 E 145 (329)
T ss_pred c
Confidence 5
|
Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, iota isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-iota is directly implicated in carcinogenesis. It is critical to oncogenic signaling mediated by Ras and Bcr-Abl. The PKC-iota gene is the target o |
| >COG0478 RIO-like serine/threonine protein kinase fused to N-terminal HTH domain [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.26 E-value=4.7e-11 Score=125.61 Aligned_cols=180 Identities=19% Similarity=0.240 Sum_probs=125.8
Q ss_pred cccccccccEEEEEEecCCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCcHHHHH
Q 002031 124 TPLATASIAQVHRATLVDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEAE 203 (977)
Q Consensus 124 ~piasaSigqV~~A~l~~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea~ 203 (977)
++||-|--+-||.|...+|.+||||+-|-|-. .+ +.+.+....+...-...++. ..-+.-.+|.+
T Consensus 97 ~~IGvGKEsdVY~~~~~~g~~~~vKfHR~Grt-sF-------rkvk~~R~y~~~~~h~sWl~-------~sRl~A~rEf~ 161 (304)
T COG0478 97 TKIGVGKESDVYVAIDPKGRKVAVKFHRLGRT-SF-------RKVKRNRDYLADKEHGSWLY-------VSRLAAEREFE 161 (304)
T ss_pred cccccCccceEEEEECCCCCEEEEEEeecCch-hh-------hhhcchhhhhccccCcchhh-------hHHHHHHHHHH
Confidence 68999999999999999999999999987733 22 11211111111111111110 01112234555
Q ss_pred HHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeeecCCceEEeeccCCCCCCChHHHHhcCCCHHHHHHHHHHHHHHHHH
Q 002031 204 NTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQSSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAYAHQIY 283 (977)
Q Consensus 204 n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~l~~i~ 283 (977)
.+.++.. .++.||+++.-+++++|||+++|..|....- ...+...+...+++.+-. +.
T Consensus 162 ~L~~L~~------------------~G~~VP~P~~~nRHaVvMe~ieG~eL~~~r~---~~en~~~il~~il~~~~~-~~ 219 (304)
T COG0478 162 ALQRLYP------------------EGVKVPKPIAWNRHAVVMEYIEGVELYRLRL---DVENPDEILDKILEEVRK-AY 219 (304)
T ss_pred HHHHhhh------------------cCCCCCCccccccceeeeehcccceeecccC---cccCHHHHHHHHHHHHHH-HH
Confidence 5555532 3588999999999999999999999987631 234567777777776544 44
Q ss_pred hcCccccCCCCCCeEEccCCCCceEEEecccccccCHHHHHHHHHHHHHHHcCCHHHHHHHHHHcC
Q 002031 284 VDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSSSMKQALAKMFFAAAEGDHVALLSAFAEMG 349 (977)
Q Consensus 284 ~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~~~r~~~~~l~~a~~~~d~~~~~~~~~~~g 349 (977)
+.|++|+|+.+-||+|++| |.+++|||-.+...+.+.-..+ +.+|.+.+++.|.+-.
T Consensus 220 ~~GiVHGDlSefNIlV~~d--g~~~vIDwPQ~v~~~hp~a~e~-------l~RDv~nii~yFrrky 276 (304)
T COG0478 220 RRGIVHGDLSEFNILVTED--GDIVVIDWPQAVPISHPDAEEL-------LERDVENIIKYFRRKY 276 (304)
T ss_pred HcCccccCCchheEEEecC--CCEEEEeCcccccCCCCCHHHH-------HHhHHHHHHHHHHHhc
Confidence 8999999999999999966 8999999999998877654443 5688888888887643
|
|
| >cd05586 STKc_Sck1_like Catalytic domain of Suppressor of loss of cAMP-dependent protein kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.26 E-value=1.8e-11 Score=138.40 Aligned_cols=77 Identities=21% Similarity=0.213 Sum_probs=59.0
Q ss_pred cCCceEEeeccCCCCCCChHHHHhcCCCHHHHHHHHHHHH--HHHHHhcCccccCCCCCCeEEccCCCCceEEEeccccc
Q 002031 239 SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTK 316 (977)
Q Consensus 239 ~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~ 316 (977)
....++||||++|.+|.+... ....++...+...+.+++ +..+|..|++|||+||.|||++.+ +.++|+|||++.
T Consensus 68 ~~~~~lv~e~~~~g~L~~~l~-~~~~~~~~~~~~~~~qil~al~~LH~~~ivHrDlkp~Nili~~~--~~~kl~Dfg~a~ 144 (330)
T cd05586 68 DSDLYLVTDYMSGGELFWHLQ-KEGRFSEDRAKFYIAELVLALEHLHKYDIVYRDLKPENILLDAT--GHIALCDFGLSK 144 (330)
T ss_pred CCeEEEEEcCCCCChHHHHHH-hcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeccCCHHHeEECCC--CCEEEecCCcCc
Confidence 455789999999998866532 223355555555444444 788999999999999999999865 899999999987
Q ss_pred cc
Q 002031 317 KL 318 (977)
Q Consensus 317 ~l 318 (977)
..
T Consensus 145 ~~ 146 (330)
T cd05586 145 AN 146 (330)
T ss_pred CC
Confidence 54
|
Serine/Threonine Kinases (STKs), Fission yeast Suppressor of loss of cAMP-dependent protein kinase (Sck1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sck1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the Schizosaccharomyces pombe STK Sck1. Sck1 plays a role in trehalase activation triggered by glucose and a nitrogen source. Trehalase catalyzes the cleavage of the disaccharide trehalose to glucose. Trehalose, as a carbohydrate reserve and stress metabolite, plays an important role in the response of |
| >cd05617 STKc_aPKC_zeta Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C zeta | Back alignment and domain information |
|---|
Probab=99.26 E-value=2.5e-11 Score=137.02 Aligned_cols=137 Identities=18% Similarity=0.181 Sum_probs=90.0
Q ss_pred ccccccccEEEEEEec-CCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCcHHHHH
Q 002031 125 PLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEAE 203 (977)
Q Consensus 125 piasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea~ 203 (977)
.||.|++|+||+|+.+ +++.||||+.+...... ..+.. .+..|..
T Consensus 2 ~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~-~~~~~---------------------------------~~~~e~~ 47 (327)
T cd05617 2 VIGRGSYAKVLLVRLKKNDQIYAMKVVKKELVHD-DEDID---------------------------------WVQTEKH 47 (327)
T ss_pred eeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhh-hhHHH---------------------------------HHHHHHH
Confidence 5899999999999974 78999999986532100 00000 1223333
Q ss_pred HHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceee---e-cCCceEEeeccCCCCCCChHHHHhcCCCHHHHHHHHHHHH-
Q 002031 204 NTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVI---Q-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY- 278 (977)
Q Consensus 204 n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~---~-~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~- 278 (977)
.+.++.+ + ..|+.++ . ....+|||||++|.+|.+... ....++...+...+.+++
T Consensus 48 ~~~~~~~-----------------~--~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~-~~~~l~~~~~~~~~~qi~~ 107 (327)
T cd05617 48 VFEQASS-----------------N--PFLVGLHSCFQTTSRLFLVIEYVNGGDLMFHMQ-RQRKLPEEHARFYAAEICI 107 (327)
T ss_pred HHHhhcC-----------------C--CCEeeEEEEEEeCCEEEEEEeCCCCCcHHHHHH-HcCCCCHHHHHHHHHHHHH
Confidence 3333211 1 1233333 2 455689999999998865532 223355555444444443
Q ss_pred -HHHHHhcCccccCCCCCCeEEccCCCCceEEEecccccc
Q 002031 279 -AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKK 317 (977)
Q Consensus 279 -l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~ 317 (977)
+..+|..|++|+|+||.|||++.+ +.++|+|||++..
T Consensus 108 al~~lH~~~ivHrDlkp~Nili~~~--~~~kl~Dfg~~~~ 145 (327)
T cd05617 108 ALNFLHERGIIYRDLKLDNVLLDAD--GHIKLTDYGMCKE 145 (327)
T ss_pred HHHHHHHCCeeccCCCHHHEEEeCC--CCEEEecccccee
Confidence 788999999999999999999865 8999999998864
|
Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, zeta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-zeta plays a critical role in activating the glucose transport response. It is activated by glucose, insulin, and exercise through diverse pathways |
| >cd05588 STKc_aPKC Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C | Back alignment and domain information |
|---|
Probab=99.26 E-value=2.1e-11 Score=137.81 Aligned_cols=139 Identities=19% Similarity=0.151 Sum_probs=89.9
Q ss_pred ccccccccEEEEEEec-CCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCcHHHHH
Q 002031 125 PLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEAE 203 (977)
Q Consensus 125 piasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea~ 203 (977)
.||.|++|.||+|+.+ +|+.||||+.+......- .++. .+..|..
T Consensus 2 ~lG~G~~g~V~~~~~~~~~~~~aiK~i~~~~~~~~-~~~~---------------------------------~~~~e~~ 47 (329)
T cd05588 2 VIGRGSYAKVLLVELKKTRRIYAMKVIKKELVNDD-EDID---------------------------------WVQTEKH 47 (329)
T ss_pred eEeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhh-hHHH---------------------------------HHHHHHH
Confidence 5899999999999974 789999999764321100 0000 0122333
Q ss_pred HHHHHHHHhCCCCCCCCCCCCCCCCC-CeEeceeee-cCCceEEeeccCCCCCCChHHHHhcCCCHHHHHHHHHHHH--H
Q 002031 204 NTRIVSANLGCKNKHEDSNKKPAYEV-DVLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--A 279 (977)
Q Consensus 204 n~~~~~~~~~~~~~~~~~~~~~~~~~-~v~vP~v~~-~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~--l 279 (977)
.+..+.+ ++ -+.+-..+. ....+|||||++|.+|.+... ....+....+...+.+++ +
T Consensus 48 il~~~~~-----------------hp~Iv~~~~~~~~~~~~~lv~e~~~~g~L~~~~~-~~~~l~~~~~~~~~~qi~~~l 109 (329)
T cd05588 48 VFETASN-----------------HPFLVGLHSCFQTESRLFFVIEFVSGGDLMFHMQ-RQRKLPEEHARFYSAEISLAL 109 (329)
T ss_pred HHHhccC-----------------CCCCCceEEEEEcCCEEEEEEeCCCCCCHHHHHH-HcCCCCHHHHHHHHHHHHHHH
Confidence 3322211 11 111222222 455689999999998865532 223455555555444444 7
Q ss_pred HHHHhcCccccCCCCCCeEEccCCCCceEEEecccccc
Q 002031 280 HQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKK 317 (977)
Q Consensus 280 ~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~ 317 (977)
..+|..|++|||+||.|||++.+ +.++|+|||++..
T Consensus 110 ~~lH~~~ivH~dlkp~Nili~~~--~~~kL~Dfg~~~~ 145 (329)
T cd05588 110 NFLHERGIIYRDLKLDNVLLDAE--GHIKLTDYGMCKE 145 (329)
T ss_pred HHHHHCCeEecCCCHHHeEECCC--CCEEECcCccccc
Confidence 88999999999999999999865 8999999999864
|
Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. They contain a C2-like region, instead of a calcium-binding (C2) region found in classical PKCs, in their regulatory domain. There are two aPKC isoforms, zeta and iota. aPKCs are involved in many cellular functions incl |
| >cd05589 STKc_PKN Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase N | Back alignment and domain information |
|---|
Probab=99.26 E-value=1.9e-11 Score=137.73 Aligned_cols=143 Identities=15% Similarity=0.116 Sum_probs=91.6
Q ss_pred cccccccccEEEEEEec-CCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCcHHHH
Q 002031 124 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (977)
Q Consensus 124 ~piasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea 202 (977)
+.||.|++|.||+|+.+ +|+.||||+.++..... ..+.. .+.+|.
T Consensus 5 ~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~-~~~~~---------------------------------~l~~e~ 50 (324)
T cd05589 5 AVLGRGHFGKVLLAEYKKTGELYAIKALKKGDIIA-RDEVE---------------------------------SLMCEK 50 (324)
T ss_pred EEEeecCCEEEEEEEECCCCCEEEEEEEEHHHhhh-hhHHH---------------------------------HHHHHH
Confidence 56899999999999974 79999999986432100 00000 122232
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeee-cCCceEEeeccCCCCCCChHHHHhcCCCHHHHHHHHHHHH--H
Q 002031 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--A 279 (977)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~--l 279 (977)
+.+..++. +. ....+.+-..+. ....++||||++|.+|.... ....++...+...+.+++ +
T Consensus 51 ~~~~~~~~-l~-------------hp~i~~~~~~~~~~~~~~lv~E~~~~~~L~~~~--~~~~l~~~~~~~~~~qi~~al 114 (324)
T cd05589 51 RIFETANS-ER-------------HPFLVNLFACFQTEDHVCFVMEYAAGGDLMMHI--HTDVFSEPRAVFYAACVVLGL 114 (324)
T ss_pred HHHHhccc-cC-------------CCChhceeeEEEcCCEEEEEEcCCCCCcHHHHh--hcCCCCHHHHHHHHHHHHHHH
Confidence 22222211 11 001112222222 45578999999999886542 333455555555555544 7
Q ss_pred HHHHhcCccccCCCCCCeEEccCCCCceEEEeccccccc
Q 002031 280 HQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKL 318 (977)
Q Consensus 280 ~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l 318 (977)
..+|..|++|+|+||.||+++.+ +.++|+|||++...
T Consensus 115 ~~lH~~~ivHrdlkp~Nill~~~--~~~kL~Dfg~~~~~ 151 (324)
T cd05589 115 QYLHENKIVYRDLKLDNLLLDTE--GFVKIADFGLCKEG 151 (324)
T ss_pred HHHHhCCeEecCCCHHHeEECCC--CcEEeCcccCCccC
Confidence 88999999999999999999865 89999999987653
|
Serine/Threonine Kinases (STKs), Protein Kinase N (PKN) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved |
| >cd06657 STKc_PAK4 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4 | Back alignment and domain information |
|---|
Probab=99.25 E-value=1.8e-11 Score=135.99 Aligned_cols=139 Identities=21% Similarity=0.223 Sum_probs=92.4
Q ss_pred cccccccccEEEEEEe-cCCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCcHHHH
Q 002031 124 TPLATASIAQVHRATL-VDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (977)
Q Consensus 124 ~piasaSigqV~~A~l-~~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea 202 (977)
..||.|++|+||+|+. .+|+.||||..+-..... +-.+.+|.
T Consensus 26 ~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~-------------------------------------~~~~~~e~ 68 (292)
T cd06657 26 IKIGEGSTGIVCIATVKSSGKLVAVKKMDLRKQQR-------------------------------------RELLFNEV 68 (292)
T ss_pred HHcCCCCCeEEEEEEEcCCCeEEEEEEecccchhH-------------------------------------HHHHHHHH
Confidence 4699999999999987 479999999753211100 00133344
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeee-cCCceEEeeccCCCCCCChHHHHhcCCCHHHHHHHHHHHH--H
Q 002031 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--A 279 (977)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~--l 279 (977)
..+..+.+ ..-+.+...+. ....++||||++|.+|.++. .....+...+...+.+++ +
T Consensus 69 ~~l~~l~h-----------------~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~--~~~~~~~~~~~~~~~ql~~~l 129 (292)
T cd06657 69 VIMRDYQH-----------------ENVVEMYNSYLVGDELWVVMEFLEGGALTDIV--THTRMNEEQIAAVCLAVLKAL 129 (292)
T ss_pred HHHHhcCC-----------------cchhheeeEEEeCCEEEEEEecCCCCcHHHHH--hcCCCCHHHHHHHHHHHHHHH
Confidence 33333321 00112222222 45678999999999987763 233445555555444444 7
Q ss_pred HHHHhcCccccCCCCCCeEEccCCCCceEEEecccccccCH
Q 002031 280 HQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 320 (977)
Q Consensus 280 ~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 320 (977)
..+|..|++|+|+||.||+++.+ +.++|+|||++..+..
T Consensus 130 ~~lH~~givH~dl~p~Nilv~~~--~~~~l~dfg~~~~~~~ 168 (292)
T cd06657 130 SVLHAQGVIHRDIKSDSILLTHD--GRVKLSDFGFCAQVSK 168 (292)
T ss_pred HHHHHCCeecCCCCHHHEEECCC--CCEEEcccccceeccc
Confidence 88999999999999999999865 8899999998876654
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell mo |
| >KOG0585 consensus Ca2+/calmodulin-dependent protein kinase kinase beta and related serine/threonine protein kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.25 E-value=1.3e-11 Score=136.69 Aligned_cols=153 Identities=18% Similarity=0.249 Sum_probs=96.2
Q ss_pred cccccccccEEEEEEe-cCCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhccccc-CcHHH
Q 002031 124 TPLATASIAQVHRATL-VDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKEL-DFNSE 201 (977)
Q Consensus 124 ~piasaSigqV~~A~l-~~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~El-d~~~E 201 (977)
+-||+|++|.|-.|+. -+|+.|||||....-... .......+...+ .++ +.++|
T Consensus 103 ~eiG~G~yGkVkLar~~~~~~l~AiKil~K~~~~~------------~~~~~~~~a~~~------------~~~ekv~~E 158 (576)
T KOG0585|consen 103 KEIGSGQYGKVKLARDEVDGKLYAIKILPKKELRR------------QYGFPRQPAMKL------------MPIEKVRRE 158 (576)
T ss_pred hhhcCCccceEEEEeecCCCcEEEEEeechhhhhh------------hccccccccccc------------CcHHHHHHH
Confidence 5699999999999997 489999999975321000 000000000000 011 23456
Q ss_pred HHHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeee---cCCceEEeeccCCCCCCChHHHHhcCCCHHHHHHHHHHHH
Q 002031 202 AENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ---SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY 278 (977)
Q Consensus 202 a~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~---~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~ 278 (977)
...++++.+ ...|..-+|.. ++.-|||+|||..+.+....... ..+.....-..+.+.+
T Consensus 159 IailKkl~H-----------------~nVV~LiEvLDDP~s~~~YlVley~s~G~v~w~p~d~-~els~~~Ar~ylrDvv 220 (576)
T KOG0585|consen 159 IAILKKLHH-----------------PNVVKLIEVLDDPESDKLYLVLEYCSKGEVKWCPPDK-PELSEQQARKYLRDVV 220 (576)
T ss_pred HHHHHhcCC-----------------cCeeEEEEeecCcccCceEEEEEeccCCccccCCCCc-ccccHHHHHHHHHHHH
Confidence 666666643 12344445553 67789999999988887542211 1122222222222222
Q ss_pred --HHHHHhcCccccCCCCCCeEEccCCCCceEEEecccccccCH
Q 002031 279 --AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 320 (977)
Q Consensus 279 --l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 320 (977)
++.+|.+|++||||||.|+|++.+ |+++|.|||.+...+.
T Consensus 221 ~GLEYLH~QgiiHRDIKPsNLLl~~~--g~VKIsDFGVs~~~~~ 262 (576)
T KOG0585|consen 221 LGLEYLHYQGIIHRDIKPSNLLLSSD--GTVKISDFGVSNEFPQ 262 (576)
T ss_pred HHHHHHHhcCeeccccchhheEEcCC--CcEEeeccceeeeccc
Confidence 889999999999999999999966 9999999999876643
|
|
| >cd07872 STKc_PCTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase | Back alignment and domain information |
|---|
Probab=99.25 E-value=2.1e-11 Score=136.32 Aligned_cols=140 Identities=15% Similarity=0.125 Sum_probs=89.8
Q ss_pred ccccccccccEEEEEEec-CCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCcHHH
Q 002031 123 ETPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSE 201 (977)
Q Consensus 123 ~~piasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~E 201 (977)
.+.||.|++|.||+|+.+ +++.||||+.+...... .+..+.+|
T Consensus 11 ~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~------------------------------------~~~~~~~E 54 (309)
T cd07872 11 LEKLGEGTYATVFKGRSKLTENLVALKEIRLEHEEG------------------------------------APCTAIRE 54 (309)
T ss_pred EEEecccCCEEEEEEEecCCCCeEEEEEeeccccCC------------------------------------cchhHHHH
Confidence 367999999999999975 78899999875432110 01123345
Q ss_pred HHHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeee-cCCceEEeeccCCCCCCChHHHHhcCCCHHHHHHHHHHHH--
Q 002031 202 AENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY-- 278 (977)
Q Consensus 202 a~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~-- 278 (977)
...+.++++ ...+.+-..+. ....++||||+++ ++.+.........+...+...+.+++
T Consensus 55 ~~~l~~l~h-----------------~~iv~~~~~~~~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~qi~~a 116 (309)
T cd07872 55 VSLLKDLKH-----------------ANIVTLHDIVHTDKSLTLVFEYLDK-DLKQYMDDCGNIMSMHNVKIFLYQILRG 116 (309)
T ss_pred HHHHHhCCC-----------------CCcceEEEEEeeCCeEEEEEeCCCC-CHHHHHHhcCCCCCHHHHHHHHHHHHHH
Confidence 555544422 11122223332 4567899999986 44443221112234444443333333
Q ss_pred HHHHHhcCccccCCCCCCeEEccCCCCceEEEeccccccc
Q 002031 279 AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKL 318 (977)
Q Consensus 279 l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l 318 (977)
+..+|..|++|||+||+||+++.+ +.++|+|||++...
T Consensus 117 L~~lH~~~ivH~dlkp~Nill~~~--~~~kl~Dfg~~~~~ 154 (309)
T cd07872 117 LAYCHRRKVLHRDLKPQNLLINER--GELKLADFGLARAK 154 (309)
T ss_pred HHHHHHCCeecCCCCHHHEEECCC--CCEEECccccceec
Confidence 788999999999999999999865 89999999998754
|
Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play |
| >KOG0198 consensus MEKK and related serine/threonine protein kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.25 E-value=2e-11 Score=134.32 Aligned_cols=79 Identities=25% Similarity=0.280 Sum_probs=59.3
Q ss_pred CceEEeeccCCCCCCChHHHHhcCCCHHHHHHHHHHHH--HHHHHhcCccccCCCCCCeEEccCCCCceEEEeccccccc
Q 002031 241 ETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKL 318 (977)
Q Consensus 241 ~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l 318 (977)
...+.|||++|++|.+...-....+....+.....++. +.+||.+||+|||+||.|||++.. ++.++|.|||+++.+
T Consensus 90 ~~~i~mEy~~~GsL~~~~~~~g~~l~E~~v~~ytr~iL~GL~ylHs~g~vH~DiK~~NiLl~~~-~~~~KlaDFG~a~~~ 168 (313)
T KOG0198|consen 90 EYNIFMEYAPGGSLSDLIKRYGGKLPEPLVRRYTRQILEGLAYLHSKGIVHCDIKPANILLDPS-NGDVKLADFGLAKKL 168 (313)
T ss_pred eeEeeeeccCCCcHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCEeccCcccceEEEeCC-CCeEEeccCcccccc
Confidence 35789999999999987442211244444444333333 888999999999999999999962 389999999999887
Q ss_pred CH
Q 002031 319 SS 320 (977)
Q Consensus 319 ~~ 320 (977)
..
T Consensus 169 ~~ 170 (313)
T KOG0198|consen 169 ES 170 (313)
T ss_pred cc
Confidence 63
|
|
| >cd06649 PKc_MEK2 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2 | Back alignment and domain information |
|---|
Probab=99.24 E-value=4.2e-11 Score=135.44 Aligned_cols=141 Identities=19% Similarity=0.180 Sum_probs=93.4
Q ss_pred cccccccccEEEEEEec-CCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCcHHHH
Q 002031 124 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (977)
Q Consensus 124 ~piasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea 202 (977)
+.||.|++|+||+|+.+ +|..||+|+.+......... .+.+|.
T Consensus 11 ~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~------------------------------------~~~~E~ 54 (331)
T cd06649 11 SELGAGNGGVVTKVQHKPSGLIMARKLIHLEIKPAIRN------------------------------------QIIREL 54 (331)
T ss_pred EeecCCCCEEEEEEEECCCCcEEEEEEeecccCHHHHH------------------------------------HHHHHH
Confidence 56999999999999985 78999999887543211110 133455
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeee-cCCceEEeeccCCCCCCChHHHHhcCCCHHHHHHHHHHHH--H
Q 002031 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--A 279 (977)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~--l 279 (977)
+.+.++.+ ..-+.+-.++. ....++||||++|.+|.++... ...++...+.....++. +
T Consensus 55 ~~l~~l~h-----------------~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~-~~~~~~~~~~~~~~~i~~~l 116 (331)
T cd06649 55 QVLHECNS-----------------PYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKE-AKRIPEEILGKVSIAVLRGL 116 (331)
T ss_pred HHHHHCCC-----------------CCCCeEEEEEEECCEEEEEeecCCCCcHHHHHHH-cCCCCHHHHHHHHHHHHHHH
Confidence 54444422 11122222332 4556899999999999877432 22344444444333333 6
Q ss_pred HHHHh-cCccccCCCCCCeEEccCCCCceEEEecccccccCH
Q 002031 280 HQIYV-DGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 320 (977)
Q Consensus 280 ~~i~~-~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 320 (977)
..+|. .|++|+|+||.|||++.+ +.++|+|||++..+..
T Consensus 117 ~~lH~~~~ivH~dlkp~Nil~~~~--~~~kl~Dfg~~~~~~~ 156 (331)
T cd06649 117 AYLREKHQIMHRDVKPSNILVNSR--GEIKLCDFGVSGQLID 156 (331)
T ss_pred HHHhhcCCEEcCCCChhhEEEcCC--CcEEEccCcccccccc
Confidence 67786 479999999999999865 8999999999876643
|
Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downst |
| >cd05069 PTKc_Yes Catalytic domain of the Protein Tyrosine Kinase, Yes | Back alignment and domain information |
|---|
Probab=99.23 E-value=3.4e-11 Score=130.94 Aligned_cols=139 Identities=19% Similarity=0.192 Sum_probs=93.4
Q ss_pred cccccccccEEEEEEecCCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCcHHHHH
Q 002031 124 TPLATASIAQVHRATLVDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEAE 203 (977)
Q Consensus 124 ~piasaSigqV~~A~l~~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea~ 203 (977)
+.||+|++|+||+|...++..||+|+.+++-.. +-++.+|.+
T Consensus 12 ~~ig~g~~~~v~~~~~~~~~~~~lK~~~~~~~~--------------------------------------~~~~~~E~~ 53 (260)
T cd05069 12 VKLGQGCFGEVWMGTWNGTTKVAIKTLKPGTMM--------------------------------------PEAFLQEAQ 53 (260)
T ss_pred eeecCcCCCeEEEEEEcCCceEEEEEcccCCcc--------------------------------------HHHHHHHHH
Confidence 569999999999999877778999987653210 002334544
Q ss_pred HHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeeecCCceEEeeccCCCCCCChHHHHh-cCCCHHHHHHHHHHHH--HH
Q 002031 204 NTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQSSETVLILEFMDGIRLNDCESLEA-FGVNKQKVVEEITRAY--AH 280 (977)
Q Consensus 204 n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~~~~~vLVmE~i~G~~L~~~~~~~~-~~~~~~~l~~~l~~~~--l~ 280 (977)
.+.++.+ ...+.+...+.....+++|||++|.+|.++..... ...+...+...+.++. +.
T Consensus 54 ~l~~l~h-----------------~~i~~~~~~~~~~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~al~ 116 (260)
T cd05069 54 IMKKLRH-----------------DKLVPLYAVVSEEPIYIVTEFMGKGSLLDFLKEGDGKYLKLPQLVDMAAQIADGMA 116 (260)
T ss_pred HHHhCCC-----------------CCeeeEEEEEcCCCcEEEEEcCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHH
Confidence 4444321 11122222233456789999999999877643211 1234444444444433 67
Q ss_pred HHHhcCccccCCCCCCeEEccCCCCceEEEecccccccC
Q 002031 281 QIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 319 (977)
Q Consensus 281 ~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~ 319 (977)
.+|..|++|+|+||+||+++++ +.++|+|||.+..+.
T Consensus 117 ~lH~~~i~H~dl~~~Nill~~~--~~~~l~dfg~~~~~~ 153 (260)
T cd05069 117 YIERMNYIHRDLRAANILVGDN--LVCKIADFGLARLIE 153 (260)
T ss_pred HHHhCCEeecccCcceEEEcCC--CeEEECCCccceEcc
Confidence 8899999999999999999865 889999999987664
|
Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine an |
| >KOG0032 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.23 E-value=3.4e-11 Score=137.41 Aligned_cols=145 Identities=19% Similarity=0.206 Sum_probs=104.4
Q ss_pred cccccccccEEEEEEec-CCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCcHHHH
Q 002031 124 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (977)
Q Consensus 124 ~piasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea 202 (977)
+.+|.|.||+||+++.+ +|+.+|+|+........-. ..-+..+|.
T Consensus 41 ~~lG~G~Fg~v~~~~~~~tg~~~A~K~i~k~~~~~~~----------------------------------~~~~v~~Ev 86 (382)
T KOG0032|consen 41 RELGRGQFGVVYLCREKSTGKEVACKVIPKRKLRGKE----------------------------------DREDVRREV 86 (382)
T ss_pred hhhCCCCceEEEEEEecCCCceeEEEEeehhhccccc----------------------------------cHHHHHHHH
Confidence 67999999999999986 5999999987532110000 111445676
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeee-cCCceEEeeccCCCCCCChHHHHhcCCCHHHHHHHHHHHH--H
Q 002031 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--A 279 (977)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~--l 279 (977)
+.++++.. ....+.++.++. ....+||||+++|+.|-+...-. .+.....+..+.+.. +
T Consensus 87 ~il~~l~~----------------hpniv~l~~~~e~~~~~~lvmEL~~GGeLfd~i~~~--~~sE~da~~~~~~il~av 148 (382)
T KOG0032|consen 87 AILQQLSG----------------HPNIVQLKDAFEDPDSVYLVMELCEGGELFDRIVKK--HYSERDAAGIIRQILEAV 148 (382)
T ss_pred HHHHhccC----------------CCCEEEEEEEEEcCCeEEEEEEecCCchHHHHHHHc--cCCHHHHHHHHHHHHHHH
Confidence 77666642 123577888887 56678999999999988764322 355544444444433 8
Q ss_pred HHHHhcCccccCCCCCCeEEccCC--CCceEEEecccccccCH
Q 002031 280 HQIYVDGFFNGDPHPGNFLVSKDP--PHRPILLDFGLTKKLSS 320 (977)
Q Consensus 280 ~~i~~~G~~H~D~hPgNIlv~~~~--~g~i~LiDFG~~~~l~~ 320 (977)
+++|..|++|||+||+|+|+.... +++++++|||++..+..
T Consensus 149 ~~lH~~gvvHrDlKpEN~L~~~~~~~~~~ik~~DFGla~~~~~ 191 (382)
T KOG0032|consen 149 KYLHSLGVVHRDLKPENLLLASKDEGSGRIKLIDFGLAKFIKP 191 (382)
T ss_pred HHHHhCCceeccCCHHHeeeccccCCCCcEEEeeCCCceEccC
Confidence 889999999999999999997542 35899999999998876
|
|
| >cd05605 STKc_GRK4_like Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.23 E-value=2.9e-11 Score=133.59 Aligned_cols=143 Identities=15% Similarity=0.134 Sum_probs=95.5
Q ss_pred cccccccccEEEEEEe-cCCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCcHHHH
Q 002031 124 TPLATASIAQVHRATL-VDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (977)
Q Consensus 124 ~piasaSigqV~~A~l-~~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea 202 (977)
+.||.|++|+||+|.. .+|+.||||+......... ..+..+.+|+
T Consensus 6 ~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~----------------------------------~~~~~~~~E~ 51 (285)
T cd05605 6 RVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKR----------------------------------KGEAMALNEK 51 (285)
T ss_pred EEEecCCCeEEEEEEEcCCCceEEEEEEehhhhhhh----------------------------------hhHHHHHHHH
Confidence 4689999999999997 4799999998754221100 0112334555
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeee-cCCceEEeeccCCCCCCChHHHHh-cCCCHHHHHHHHHHHH--
Q 002031 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLEA-FGVNKQKVVEEITRAY-- 278 (977)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLVmE~i~G~~L~~~~~~~~-~~~~~~~l~~~l~~~~-- 278 (977)
..+.++.+ ...+.+...+. ....++||||++|.+|.+...... ..++...+...+.+++
T Consensus 52 ~~l~~l~h-----------------~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~~ 114 (285)
T cd05605 52 QILEKVNS-----------------RFVVSLAYAYETKDALCLVLTLMNGGDLKFHIYNMGNPGFDEERAVFYAAEITCG 114 (285)
T ss_pred HHHHhcCC-----------------CCEeeeeeeecCCCeEEEEEeccCCCcHHHHHHhcCcCCCCHHHHHHHHHHHHHH
Confidence 55554422 11122222222 345789999999999976543221 2345555555445544
Q ss_pred HHHHHhcCccccCCCCCCeEEccCCCCceEEEecccccccC
Q 002031 279 AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 319 (977)
Q Consensus 279 l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~ 319 (977)
+..+|..|++|+|++|.||+++.+ +.++|+|||++..+.
T Consensus 115 l~~lH~~~ivH~dlkp~Nil~~~~--~~~~l~Dfg~~~~~~ 153 (285)
T cd05605 115 LEDLHRERIVYRDLKPENILLDDY--GHIRISDLGLAVEIP 153 (285)
T ss_pred HHHHHHCCcEecCCCHHHEEECCC--CCEEEeeCCCceecC
Confidence 678999999999999999999865 889999999987764
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5, |
| >cd05070 PTKc_Fyn_Yrk Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk | Back alignment and domain information |
|---|
Probab=99.23 E-value=3.4e-11 Score=130.82 Aligned_cols=140 Identities=19% Similarity=0.209 Sum_probs=96.4
Q ss_pred cccccccccEEEEEEecCCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCcHHHHH
Q 002031 124 TPLATASIAQVHRATLVDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEAE 203 (977)
Q Consensus 124 ~piasaSigqV~~A~l~~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea~ 203 (977)
+.||.|++|+||+|...++..||+|+.+++... +-+|.+|+.
T Consensus 12 ~~ig~g~~~~v~~~~~~~~~~~~~k~~~~~~~~--------------------------------------~~~~~~E~~ 53 (260)
T cd05070 12 KKLGNGQFGEVWMGTWNGNTKVAVKTLKPGTMS--------------------------------------PESFLEEAQ 53 (260)
T ss_pred heeccccCceEEEEEecCCceeEEEEecCCCCC--------------------------------------HHHHHHHHH
Confidence 569999999999999888899999988764211 002445555
Q ss_pred HHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeeecCCceEEeeccCCCCCCChHHHH-hcCCCHHHHHHHHHHHH--HH
Q 002031 204 NTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQSSETVLILEFMDGIRLNDCESLE-AFGVNKQKVVEEITRAY--AH 280 (977)
Q Consensus 204 n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~~~~~vLVmE~i~G~~L~~~~~~~-~~~~~~~~l~~~l~~~~--l~ 280 (977)
-+.++.+ ...+.+.........+++|||++|.+|.+..... ...++...+...+.+++ +.
T Consensus 54 ~l~~l~~-----------------~~i~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~al~ 116 (260)
T cd05070 54 IMKKLRH-----------------DKLVQLYAVVSEEPIYIVTEYMSKGSLLDFLKDGEGRALKLPNLVDMAAQVAAGMA 116 (260)
T ss_pred HHHhcCC-----------------CceEEEEeEECCCCcEEEEEecCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHH
Confidence 4444422 1112233333356679999999999988764321 11244444444444443 67
Q ss_pred HHHhcCccccCCCCCCeEEccCCCCceEEEecccccccCH
Q 002031 281 QIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 320 (977)
Q Consensus 281 ~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 320 (977)
.+|..|++|+|++|.||+++.+ +.++|+|||.+..+..
T Consensus 117 ~lH~~~i~H~di~p~Nili~~~--~~~~l~dfg~~~~~~~ 154 (260)
T cd05070 117 YIERMNYIHRDLRSANILVGDG--LVCKIADFGLARLIED 154 (260)
T ss_pred HHHHCCcccCCCccceEEEeCC--ceEEeCCceeeeeccC
Confidence 8899999999999999999865 7899999999987643
|
Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that r |
| >cd05623 STKc_MRCK_alpha Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase alpha | Back alignment and domain information |
|---|
Probab=99.23 E-value=3.7e-11 Score=136.01 Aligned_cols=79 Identities=18% Similarity=0.155 Sum_probs=59.0
Q ss_pred cCCceEEeeccCCCCCCChHHHHhcCCCHHHHHHHHHHHH--HHHHHhcCccccCCCCCCeEEccCCCCceEEEeccccc
Q 002031 239 SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTK 316 (977)
Q Consensus 239 ~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~ 316 (977)
....+|||||++|++|.++.......+....+...+.++. +..+|..|++|||+||.|||++.+ +.++|+|||++.
T Consensus 73 ~~~~~lv~ey~~~g~L~~~l~~~~~~l~~~~~~~~~~qi~~al~~lH~~~iiHrDlkp~Nili~~~--~~~kL~DfG~a~ 150 (332)
T cd05623 73 ENNLYLVMDYYVGGDLLTLLSKFEDRLPEDMARFYLAEMVIAIDSVHQLHYVHRDIKPDNILMDMN--GHIRLADFGSCL 150 (332)
T ss_pred CCEEEEEEeccCCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHEEECCC--CCEEEeecchhe
Confidence 4556899999999999877542223344444433333333 778999999999999999999855 899999999987
Q ss_pred ccC
Q 002031 317 KLS 319 (977)
Q Consensus 317 ~l~ 319 (977)
.+.
T Consensus 151 ~~~ 153 (332)
T cd05623 151 KLM 153 (332)
T ss_pred ecc
Confidence 653
|
Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKalpha is expressed ubiquitously in many tissues. It plays a role in the regulation of peripheral actin reorganization and neurite outgrowth. It may also play a role in the transferrin iron uptake pathw |
| >cd05068 PTKc_Frk_like Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=99.23 E-value=2.8e-11 Score=131.51 Aligned_cols=139 Identities=17% Similarity=0.193 Sum_probs=96.4
Q ss_pred cccccccccEEEEEEecCCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCcHHHHH
Q 002031 124 TPLATASIAQVHRATLVDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEAE 203 (977)
Q Consensus 124 ~piasaSigqV~~A~l~~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea~ 203 (977)
+.||.|++|.||+|...+++.||||..+++-.. +-++.+|.+
T Consensus 12 ~~lg~g~~~~v~~~~~~~~~~v~iK~~~~~~~~--------------------------------------~~~~~~e~~ 53 (261)
T cd05068 12 RKLGAGQFGEVWEGLWNNTTPVAVKTLKPGTMD--------------------------------------PKDFLAEAQ 53 (261)
T ss_pred EEecccCCccEEEEEecCCeEEEEEeeCCCccc--------------------------------------HHHHHHHHH
Confidence 689999999999999878889999987653210 012344555
Q ss_pred HHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeee-cCCceEEeeccCCCCCCChHHHHh-cCCCHHHHHHHHHHHH--H
Q 002031 204 NTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLEA-FGVNKQKVVEEITRAY--A 279 (977)
Q Consensus 204 n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLVmE~i~G~~L~~~~~~~~-~~~~~~~l~~~l~~~~--l 279 (977)
.+.++.+ ..-+.+-..+. ....++||||++|.+|.+...... ...+...+...+.+++ +
T Consensus 54 ~l~~l~h-----------------~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l 116 (261)
T cd05068 54 IMKKLRH-----------------PKLIQLYAVCTLEEPIYIVTELMKYGSLLEYLQGGAGRALKLPQLIDMAAQVASGM 116 (261)
T ss_pred HHHHCCC-----------------CCccceeEEEecCCCeeeeeecccCCcHHHHHhccCCCCCCHHHHHHHHHHHHHHH
Confidence 5554432 00111222222 455689999999999987643221 2345555555555544 7
Q ss_pred HHHHhcCccccCCCCCCeEEccCCCCceEEEecccccccC
Q 002031 280 HQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 319 (977)
Q Consensus 280 ~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~ 319 (977)
..+|..|++|+|+||+||+++.+ +.++|+|||++..+.
T Consensus 117 ~~lH~~~i~H~dl~p~Nil~~~~--~~~~l~dfg~~~~~~ 154 (261)
T cd05068 117 AYLEAQNYIHRDLAARNVLVGEN--NICKVADFGLARVIK 154 (261)
T ss_pred HHHHhCCeeeccCCcceEEEcCC--CCEEECCcceEEEcc
Confidence 78899999999999999999965 889999999988775
|
Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins a |
| >PRK13184 pknD serine/threonine-protein kinase; Reviewed | Back alignment and domain information |
|---|
Probab=99.23 E-value=4.5e-11 Score=147.63 Aligned_cols=142 Identities=13% Similarity=0.096 Sum_probs=93.0
Q ss_pred cccccccccEEEEEEec-CCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCcHHHH
Q 002031 124 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (977)
Q Consensus 124 ~piasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea 202 (977)
+.||.|++|.||+|+.. +|+.||||+.+......- ... -.|.+|+
T Consensus 8 ~~LGkGgfG~VYlA~d~~tg~~VAIK~I~~~l~~~e----------------------------~~~------~rflrEi 53 (932)
T PRK13184 8 RLIGKGGMGEVYLAYDPVCSRRVALKKIREDLSENP----------------------------LLK------KRFLREA 53 (932)
T ss_pred EEEecCCCEEEEEEEECCCCcEEEEEEECcccccCH----------------------------HHH------HHHHHHH
Confidence 57999999999999974 799999998765332100 000 0244555
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeee-cCCceEEeeccCCCCCCChHHHHh----------cCCCHHHHH
Q 002031 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLEA----------FGVNKQKVV 271 (977)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLVmE~i~G~~L~~~~~~~~----------~~~~~~~l~ 271 (977)
+.+.++.+ ..-+.+-.++. ....++||||++|.+|.++..... .+.+...+.
T Consensus 54 ~ILs~L~H-----------------PNIVkl~~v~~d~~~lyLVMEY~eGGSL~~lL~s~~~~~~l~e~~~~~lsv~~iL 116 (932)
T PRK13184 54 KIAADLIH-----------------PGIVPVYSICSDGDPVYYTMPYIEGYTLKSLLKSVWQKESLSKELAEKTSVGAFL 116 (932)
T ss_pred HHHHhCCC-----------------cCcCeEEEEEeeCCEEEEEEEcCCCCCHHHHHHHhhhccccchhhhcccCHHHHH
Confidence 55544422 01112222222 455689999999999987643210 112223333
Q ss_pred HHHHHHH--HHHHHhcCccccCCCCCCeEEccCCCCceEEEeccccccc
Q 002031 272 EEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKL 318 (977)
Q Consensus 272 ~~l~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l 318 (977)
..+.++. +..+|..|++|||+||+||+++.+ +.++|+|||++..+
T Consensus 117 ~I~~QIa~AL~yLHs~GIIHRDLKPeNILLd~d--g~vKLiDFGLAk~i 163 (932)
T PRK13184 117 SIFHKICATIEYVHSKGVLHRDLKPDNILLGLF--GEVVILDWGAAIFK 163 (932)
T ss_pred HHHHHHHHHHHHHHHCCccccCCchheEEEcCC--CCEEEEecCcceec
Confidence 3333333 778999999999999999999865 89999999999876
|
|
| >cd05081 PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3 | Back alignment and domain information |
|---|
Probab=99.23 E-value=4.3e-11 Score=131.84 Aligned_cols=141 Identities=21% Similarity=0.236 Sum_probs=92.9
Q ss_pred cccccccccEEEEEEe-----cCCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCc
Q 002031 124 TPLATASIAQVHRATL-----VDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDF 198 (977)
Q Consensus 124 ~piasaSigqV~~A~l-----~~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~ 198 (977)
+.||+|++|.||+|+. .+|+.||||+.+....... . .+
T Consensus 10 ~~lg~g~~g~v~~~~~~~~~~~~~~~v~iK~~~~~~~~~~---------------------------~----------~~ 52 (284)
T cd05081 10 QQLGKGNFGSVELCRYDPLQDNTGEVVAVKKLQHSTAEHL---------------------------R----------DF 52 (284)
T ss_pred eeccCCCCceEEEEEecCCcCCCCcEEEEEEeccCCHHHH---------------------------H----------HH
Confidence 5799999999999984 3689999998754322110 0 13
Q ss_pred HHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeee---cCCceEEeeccCCCCCCChHHHHhcCCCHHHHHHHHH
Q 002031 199 NSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ---SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEIT 275 (977)
Q Consensus 199 ~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~---~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~ 275 (977)
.+|.+.+.++.+ ..-+.+..+.. ....++||||++|.+|.++........+...+...+.
T Consensus 53 ~~e~~~l~~l~h-----------------~~iv~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~l~~~~~~~~~~ 115 (284)
T cd05081 53 EREIEILKSLQH-----------------DNIVKYKGVCYSAGRRNLRLVMEYLPYGSLRDYLQKHRERLDHRKLLLYAS 115 (284)
T ss_pred HHHHHHHHhCCC-----------------CCeeEEEEEEccCCCCceEEEEEecCCCCHHHHHHhcCcCCCHHHHHHHHH
Confidence 344444444321 00111111211 1345799999999999877432222344454444444
Q ss_pred HHH--HHHHHhcCccccCCCCCCeEEccCCCCceEEEecccccccCH
Q 002031 276 RAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 320 (977)
Q Consensus 276 ~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 320 (977)
+++ +..+|..|++|+|+||.||+++.+ ++++|+|||++..+..
T Consensus 116 ~l~~aL~~LH~~~i~H~dlkp~nili~~~--~~~~l~dfg~~~~~~~ 160 (284)
T cd05081 116 QICKGMEYLGSKRYVHRDLATRNILVESE--NRVKIGDFGLTKVLPQ 160 (284)
T ss_pred HHHHHHHHHHHCCceeccCCHhhEEECCC--CeEEECCCcccccccC
Confidence 443 778999999999999999999865 8899999999887643
|
Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as th |
| >cd05607 STKc_GRK7 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 7 | Back alignment and domain information |
|---|
Probab=99.23 E-value=4.4e-11 Score=131.62 Aligned_cols=80 Identities=19% Similarity=0.234 Sum_probs=59.6
Q ss_pred cCCceEEeeccCCCCCCChHHHH-hcCCCHHHHHHHHHHHH--HHHHHhcCccccCCCCCCeEEccCCCCceEEEecccc
Q 002031 239 SSETVLILEFMDGIRLNDCESLE-AFGVNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLT 315 (977)
Q Consensus 239 ~~~~vLVmE~i~G~~L~~~~~~~-~~~~~~~~l~~~l~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~ 315 (977)
....++||||++|.+|.+..... ..+.+...+...+.++. +..+|..|++|+|+||.||+++.+ +.++|+|||++
T Consensus 65 ~~~~~lv~e~~~g~~L~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~dikp~Nili~~~--~~~~l~Dfg~~ 142 (277)
T cd05607 65 KTHLCLVMSLMNGGDLKYHIYNVGERGLEMERVIHYSAQITCGILHLHSMDIVYRDMKPENVLLDDQ--GNCRLSDLGLA 142 (277)
T ss_pred CCeEEEEEecCCCCCHHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHHCCEEEccCChHhEEEcCC--CCEEEeeceee
Confidence 45578999999999987654221 12345555444444433 788999999999999999999865 88999999998
Q ss_pred cccCH
Q 002031 316 KKLSS 320 (977)
Q Consensus 316 ~~l~~ 320 (977)
..+..
T Consensus 143 ~~~~~ 147 (277)
T cd05607 143 VELKD 147 (277)
T ss_pred eecCC
Confidence 76643
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK7 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK7, also called iodopsin kinase, belongs to the visual gr |
| >KOG1165 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.22 E-value=2.1e-11 Score=129.63 Aligned_cols=138 Identities=16% Similarity=0.268 Sum_probs=104.8
Q ss_pred cccccccccEEEEEEe-cCCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCcHHHH
Q 002031 124 TPLATASIAQVHRATL-VDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (977)
Q Consensus 124 ~piasaSigqV~~A~l-~~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea 202 (977)
+.||.||||..+.|+. -++++||||.-.-. .+.. .++.|-
T Consensus 34 kKIGeGsFG~lf~G~Nl~nne~VAIKfEPrk-------------------------S~AP--------------QLrdEY 74 (449)
T KOG1165|consen 34 KKIGEGSFGVLFLGKNLYNNEPVAIKFEPRK-------------------------SEAP--------------QLRDEY 74 (449)
T ss_pred cccccCcceeeecccccccCceEEEEecccc-------------------------CCcc--------------hHHHHH
Confidence 5799999999999984 68999999964211 1111 122333
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeee---c-CCceEEeeccCCCCCCChHHHHhcCCCHHHHHHHHHHHH
Q 002031 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ---S-SETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY 278 (977)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~---~-~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~ 278 (977)
+.-+.+.. ..-||.||. | -.++||||.+ |.+|.|+..+....++.+.++...++.+
T Consensus 75 r~YKlL~g-------------------~~GIP~vYYFGqeG~~NiLVidLL-GPSLEDLFD~CgR~FSvKTV~miA~Qmi 134 (449)
T KOG1165|consen 75 RTYKLLGG-------------------TEGIPQVYYFGQEGKYNILVIDLL-GPSLEDLFDLCGRRFSVKTVAMIAKQMI 134 (449)
T ss_pred HHHHHHcC-------------------CCCCCceeeeccccchhhhhhhhh-CcCHHHHHHHhcCcccHHhHHHHHHHHH
Confidence 33333321 346888886 4 3479999988 9999999988888899998888888877
Q ss_pred --HHHHHhcCccccCCCCCCeEEccCC---CCceEEEecccccccCH
Q 002031 279 --AHQIYVDGFFNGDPHPGNFLVSKDP---PHRPILLDFGLTKKLSS 320 (977)
Q Consensus 279 --l~~i~~~G~~H~D~hPgNIlv~~~~---~g~i~LiDFG~~~~l~~ 320 (977)
++.+|.+.+|-||+||.|+||...+ ...|.+|||||++++-+
T Consensus 135 ~rie~vH~k~LIYRDIKPdNFLIGrp~~k~~n~IhiiDFGmAK~YrD 181 (449)
T KOG1165|consen 135 TRIEYVHEKDLIYRDIKPDNFLIGRPGTKDANVIHIIDFGMAKEYRD 181 (449)
T ss_pred HHHHHHHhcceeecccCccceeecCCCCCCCceEEEEeccchhhhcC
Confidence 8899999999999999999997532 24589999999998744
|
|
| >cd05632 STKc_GRK5 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5 | Back alignment and domain information |
|---|
Probab=99.22 E-value=3.7e-11 Score=132.78 Aligned_cols=143 Identities=15% Similarity=0.123 Sum_probs=96.5
Q ss_pred cccccccccEEEEEEe-cCCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCcHHHH
Q 002031 124 TPLATASIAQVHRATL-VDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (977)
Q Consensus 124 ~piasaSigqV~~A~l-~~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea 202 (977)
+.||+|++|.||+|+. .+|+.||||+..+.....-. .+..+.+|.
T Consensus 6 ~~lg~G~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~----------------------------------~~~~~~~E~ 51 (285)
T cd05632 6 RVLGKGGFGEVCACQVRATGKMYACKRLEKKRIKKRK----------------------------------GESMALNEK 51 (285)
T ss_pred EEEecCCCeEEEEEEECCCCcEEEEEEeehhhhhhhh----------------------------------HHHHHHHHH
Confidence 5699999999999997 47999999987543211000 001234455
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeee-cCCceEEeeccCCCCCCChHHHH-hcCCCHHHHHHHHHHHH--
Q 002031 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLE-AFGVNKQKVVEEITRAY-- 278 (977)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLVmE~i~G~~L~~~~~~~-~~~~~~~~l~~~l~~~~-- 278 (977)
+.+.++++ ...+.+...+. ....++||||++|.+|.+..... ...++...+...+.+++
T Consensus 52 ~il~~l~~-----------------~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~ql~~~ 114 (285)
T cd05632 52 QILEKVNS-----------------QFVVNLAYAYETKDALCLVLTIMNGGDLKFHIYNMGNPGFEEERALFYAAEILCG 114 (285)
T ss_pred HHHHHcCC-----------------cCceeEEEEEecCCEEEEEEEeccCccHHHHHHHhcCCCCCHHHHHHHHHHHHHH
Confidence 55555432 11122333333 34568999999999887654322 12355666666555554
Q ss_pred HHHHHhcCccccCCCCCCeEEccCCCCceEEEecccccccC
Q 002031 279 AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 319 (977)
Q Consensus 279 l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~ 319 (977)
+..+|..|++|+|+||.||+++.+ +.++|+|||++..++
T Consensus 115 l~~lH~~~iiH~dikp~Nili~~~--~~~kl~Dfg~~~~~~ 153 (285)
T cd05632 115 LEDLHRENTVYRDLKPENILLDDY--GHIRISDLGLAVKIP 153 (285)
T ss_pred HHHHHhCCeeecCCCHHHEEECCC--CCEEEecCCcceecC
Confidence 788999999999999999999865 789999999987654
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK5 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK5 is widely expressed in many tissues. It associates with |
| >PTZ00426 cAMP-dependent protein kinase catalytic subunit; Provisional | Back alignment and domain information |
|---|
Probab=99.22 E-value=3.5e-11 Score=136.70 Aligned_cols=143 Identities=21% Similarity=0.143 Sum_probs=91.2
Q ss_pred cccccccccEEEEEEec--CCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCcHHH
Q 002031 124 TPLATASIAQVHRATLV--DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSE 201 (977)
Q Consensus 124 ~piasaSigqV~~A~l~--~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~E 201 (977)
+.||+|++|.||+|+.+ ++..||||+....... .. . ..+ .+.+|
T Consensus 36 ~~ig~G~~g~Vy~a~~~~~~~~~vavK~~~~~~~~--~~--~--------------------~~~----------~~~~E 81 (340)
T PTZ00426 36 RTLGTGSFGRVILATYKNEDFPPVAIKRFEKSKII--KQ--K--------------------QVD----------HVFSE 81 (340)
T ss_pred EEEeecCCeEEEEEEEECCCCeEEEEEEEEHHHhh--hh--h--------------------hHH----------HHHHH
Confidence 68999999999999864 3468999976421100 00 0 000 13345
Q ss_pred HHHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeee-cCCceEEeeccCCCCCCChHHHHhcCCCHHHHHHHHHHHH--
Q 002031 202 AENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY-- 278 (977)
Q Consensus 202 a~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~-- 278 (977)
...+..+.+ ..-+.+-..+. ....+|||||++|.+|.+.... ...++...+...+.+++
T Consensus 82 ~~~l~~l~h-----------------p~Iv~~~~~~~~~~~~~lv~Ey~~~g~L~~~i~~-~~~~~~~~~~~~~~qi~~a 143 (340)
T PTZ00426 82 RKILNYINH-----------------PFCVNLYGSFKDESYLYLVLEFVIGGEFFTFLRR-NKRFPNDVGCFYAAQIVLI 143 (340)
T ss_pred HHHHHhCCC-----------------CCCcceEEEEEeCCEEEEEEeCCCCCcHHHHHHH-cCCCCHHHHHHHHHHHHHH
Confidence 554444422 00111222222 4556899999999998776432 22344444333333333
Q ss_pred HHHHHhcCccccCCCCCCeEEccCCCCceEEEecccccccCH
Q 002031 279 AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 320 (977)
Q Consensus 279 l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 320 (977)
+..+|..|++|||+||+|||++.+ +.++|+|||++..++.
T Consensus 144 L~~LH~~~ivHrDLkp~NILl~~~--~~ikL~DFG~a~~~~~ 183 (340)
T PTZ00426 144 FEYLQSLNIVYRDLKPENLLLDKD--GFIKMTDFGFAKVVDT 183 (340)
T ss_pred HHHHHHCCeEccCCCHHHEEECCC--CCEEEecCCCCeecCC
Confidence 788999999999999999999855 8999999999987653
|
|
| >cd05104 PTKc_Kit Catalytic domain of the Protein Tyrosine Kinase, Kit | Back alignment and domain information |
|---|
Probab=99.22 E-value=4.9e-11 Score=137.45 Aligned_cols=50 Identities=14% Similarity=0.230 Sum_probs=39.4
Q ss_pred HHHHHHHHHH--HHHHHhcCccccCCCCCCeEEccCCCCceEEEecccccccCH
Q 002031 269 KVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 320 (977)
Q Consensus 269 ~l~~~l~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 320 (977)
.+...+.++. +..+|..|++|+|+||.|||++.+ +.++|+|||++..+..
T Consensus 215 ~~~~~~~qi~~~l~~lH~~~ivH~Dlkp~Nill~~~--~~~kl~DfG~a~~~~~ 266 (375)
T cd05104 215 DLLSFSYQVAKGMSFLASKNCIHRDLAARNILLTHG--RITKICDFGLARDIRN 266 (375)
T ss_pred HHHHHHHHHHHHHHHHHHCCeeccCCchhhEEEECC--CcEEEecCccceeccC
Confidence 3334334433 778899999999999999999855 7899999999887643
|
Protein Tyrosine Kinase (PTK) family; Kit (or c-Kit); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Kit is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of Kit to its ligand, the stem-cell factor (SCF), leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem ce |
| >cd05582 STKc_RSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase | Back alignment and domain information |
|---|
Probab=99.21 E-value=4.1e-11 Score=134.67 Aligned_cols=141 Identities=21% Similarity=0.216 Sum_probs=91.7
Q ss_pred cccccccccEEEEEEe----cCCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCcH
Q 002031 124 TPLATASIAQVHRATL----VDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFN 199 (977)
Q Consensus 124 ~piasaSigqV~~A~l----~~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~ 199 (977)
+.||.|++|.||+++. .+|+.||||+.+...... . ....+.
T Consensus 2 ~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~--~---------------------------------~~~~~~ 46 (318)
T cd05582 2 KVLGQGSFGKVFLVRKITGPDAGQLYAMKVLKKATLKV--R---------------------------------DRVRTK 46 (318)
T ss_pred ceeeeCCCEEEEEEEEeccCCCCCEEEEEEEEHHHhhh--h---------------------------------hHHHHH
Confidence 4689999999999975 368999999875321100 0 000123
Q ss_pred HHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeee-cCCceEEeeccCCCCCCChHHHHhcCCCHHHHHHHHHHHH
Q 002031 200 SEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY 278 (977)
Q Consensus 200 ~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~ 278 (977)
+|.+.+.++.+ ..-+.+-..+. ....+|||||++|.+|.+... ....++...+...+.+++
T Consensus 47 ~E~~~l~~l~h-----------------~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~-~~~~l~~~~~~~~~~qi~ 108 (318)
T cd05582 47 MERDILAEVNH-----------------PFIVKLHYAFQTEGKLYLILDFLRGGDLFTRLS-KEVMFTEEDVKFYLAELA 108 (318)
T ss_pred HHHHHHHhCCC-----------------CCcccEEEEEEcCCEEEEEEcCCCCCcHHHHHH-HcCCCCHHHHHHHHHHHH
Confidence 45554444422 00111112222 455689999999998876532 122345555554444443
Q ss_pred --HHHHHhcCccccCCCCCCeEEccCCCCceEEEecccccccC
Q 002031 279 --AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 319 (977)
Q Consensus 279 --l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~ 319 (977)
+..+|..|++|+|+||.||+++.+ +.++|+|||++....
T Consensus 109 ~~l~~lH~~~i~H~dlkp~Nil~~~~--~~~kL~Dfg~~~~~~ 149 (318)
T cd05582 109 LALDHLHSLGIIYRDLKPENILLDEE--GHIKLTDFGLSKESI 149 (318)
T ss_pred HHHHHHHHCCEecCCCCHHHeEECCC--CcEEEeeccCCcccC
Confidence 788999999999999999999865 899999999987653
|
Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylate |
| >PRK09605 bifunctional UGMP family protein/serine/threonine protein kinase; Validated | Back alignment and domain information |
|---|
Probab=99.21 E-value=1.2e-10 Score=140.33 Aligned_cols=141 Identities=21% Similarity=0.343 Sum_probs=95.3
Q ss_pred CccccccccccEEEEEEecCCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCcHHH
Q 002031 122 VETPLATASIAQVHRATLVDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSE 201 (977)
Q Consensus 122 d~~piasaSigqV~~A~l~~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~E 201 (977)
..+.||.|++|.||+|+. .++.+++|+..+..... .++. +.. ..-.+.+|
T Consensus 337 ~~~~iG~G~~g~Vy~~~~-~~~~~v~k~~~~~~~~~--~~~~----------------------~~~-----~~~~~~~E 386 (535)
T PRK09605 337 PDHLIGKGAEADIKKGEY-LGRDAVIKERVPKGYRH--PELD----------------------ERL-----RTERTRAE 386 (535)
T ss_pred ccceeccCCcEEEEEEee-cCccceeEEEecccccc--hhHH----------------------HHH-----HHHHHHHH
Confidence 357899999999999987 45567777654321100 0000 000 01135677
Q ss_pred HHHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeee--cCCceEEeeccCCCCCCChHHHHhcCCCHHHHHHHHHHHHH
Q 002031 202 AENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ--SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAYA 279 (977)
Q Consensus 202 a~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~--~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~l 279 (977)
++.+.++++ ..+.+|.++. ....+|||||++|.+|.+... ....++..+.+. +
T Consensus 387 ~~~l~~l~~------------------~~i~~p~~~~~~~~~~~lv~E~~~g~~L~~~l~------~~~~~~~~i~~~-L 441 (535)
T PRK09605 387 ARLLSEARR------------------AGVPTPVIYDVDPEEKTIVMEYIGGKDLKDVLE------GNPELVRKVGEI-V 441 (535)
T ss_pred HHHHHhhcc------------------cCCCeeEEEEEeCCCCEEEEEecCCCcHHHHHH------HHHHHHHHHHHH-H
Confidence 777777643 2355566654 457899999999999987642 123445544443 6
Q ss_pred HHHHhcCccccCCCCCCeEEccCCCCceEEEecccccccCH
Q 002031 280 HQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 320 (977)
Q Consensus 280 ~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 320 (977)
.++|..|++|||+||+|||++ + ++++|+|||+++..+.
T Consensus 442 ~~lH~~giiHrDlkp~NILl~-~--~~~~liDFGla~~~~~ 479 (535)
T PRK09605 442 AKLHKAGIVHGDLTTSNFIVR-D--DRLYLIDFGLGKYSDL 479 (535)
T ss_pred HHHHhCCCccCCCChHHEEEE-C--CcEEEEeCcccccCCc
Confidence 789999999999999999993 3 7899999999987654
|
|
| >KOG0582 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.21 E-value=4.3e-11 Score=132.01 Aligned_cols=141 Identities=19% Similarity=0.258 Sum_probs=98.8
Q ss_pred cccccccccEEEEEEe-cCCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCcHHHH
Q 002031 124 TPLATASIAQVHRATL-VDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (977)
Q Consensus 124 ~piasaSigqV~~A~l-~~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea 202 (977)
+-||.|.-++||+|+. +.++.||||+..= + ....|+. .+++|.
T Consensus 32 e~IG~G~sa~V~~A~c~p~~e~VAIK~inL--E-kc~~~ld---------------------------------~l~kE~ 75 (516)
T KOG0582|consen 32 EVIGVGASAVVYLARCIPTNEVVAIKIINL--E-KCNNDLD---------------------------------ALRKEV 75 (516)
T ss_pred EEEeccceeEeeeeeecccCCEEEEEEeeh--h-hhhhhHH---------------------------------HHHHHH
Confidence 4589998899999996 5789999997631 1 1111211 134566
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCe-Eeceeee-cCCceEEeeccCCCCCCChHHH-HhcCCCHHHHHHHHHHHH-
Q 002031 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDV-LIPEVIQ-SSETVLILEFMDGIRLNDCESL-EAFGVNKQKVVEEITRAY- 278 (977)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v-~vP~v~~-~~~~vLVmE~i~G~~L~~~~~~-~~~~~~~~~l~~~l~~~~- 278 (977)
.++..+.| +++ ..-..+- ....++||.|+.|+++.++..- -..|++...|+..+.+++
T Consensus 76 ~~msl~~H------------------PNIv~~~~sFvv~~~LWvVmpfMa~GS~ldIik~~~~~Gl~E~~Ia~iLre~Lk 137 (516)
T KOG0582|consen 76 QTMSLIDH------------------PNIVTYHCSFVVDSELWVVMPFMAGGSLLDIIKTYYPDGLEEASIATILREVLK 137 (516)
T ss_pred HHhhhcCC------------------CCcceEEEEEEecceeEEeehhhcCCcHHHHHHHHccccccHHHHHHHHHHHHH
Confidence 66555432 221 1111111 5667999999999999887542 234677666776666665
Q ss_pred -HHHHHhcCccccCCCCCCeEEccCCCCceEEEecccccccCH
Q 002031 279 -AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 320 (977)
Q Consensus 279 -l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 320 (977)
+.++|..|.+|||+|+|||||+.+ |.|+|.|||....+-+
T Consensus 138 aL~YLH~~G~IHRdvKAgnILi~~d--G~VkLadFgvsa~l~~ 178 (516)
T KOG0582|consen 138 ALDYLHQNGHIHRDVKAGNILIDSD--GTVKLADFGVSASLFD 178 (516)
T ss_pred HHHHHHhcCceecccccccEEEcCC--CcEEEcCceeeeeecc
Confidence 889999999999999999999966 9999999998776643
|
|
| >cd05071 PTKc_Src Catalytic domain of the Protein Tyrosine Kinase, Src | Back alignment and domain information |
|---|
Probab=99.21 E-value=4.6e-11 Score=130.22 Aligned_cols=140 Identities=19% Similarity=0.201 Sum_probs=94.2
Q ss_pred cccccccccEEEEEEecCCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCcHHHHH
Q 002031 124 TPLATASIAQVHRATLVDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEAE 203 (977)
Q Consensus 124 ~piasaSigqV~~A~l~~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea~ 203 (977)
+.||.|++|.||+|+..++..||||+.++.... +-+|.+|..
T Consensus 12 ~~lg~g~~~~v~~~~~~~~~~valK~~~~~~~~--------------------------------------~~~~~~E~~ 53 (262)
T cd05071 12 VKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMS--------------------------------------PEAFLQEAQ 53 (262)
T ss_pred eecCCCCCCcEEEEEecCCceEEEEecccCccC--------------------------------------HHHHHHHHH
Confidence 468999999999999877678999987642110 002445555
Q ss_pred HHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeeecCCceEEeeccCCCCCCChHHHH-hcCCCHHHHHHHHHHHH--HH
Q 002031 204 NTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQSSETVLILEFMDGIRLNDCESLE-AFGVNKQKVVEEITRAY--AH 280 (977)
Q Consensus 204 n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~~~~~vLVmE~i~G~~L~~~~~~~-~~~~~~~~l~~~l~~~~--l~ 280 (977)
.+.++.+ ..-+.+.........++||||++|.+|.++.... ....+...+...+.+++ +.
T Consensus 54 ~l~~l~~-----------------~~i~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~aL~ 116 (262)
T cd05071 54 VMKKLRH-----------------EKLVQLYAVVSEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMA 116 (262)
T ss_pred HHHhCCC-----------------CCcceEEEEECCCCcEEEEEcCCCCcHHHHHhhccccCCCHHHHHHHHHHHHHHHH
Confidence 5554422 0112222222245578999999999988764321 11234444444444443 67
Q ss_pred HHHhcCccccCCCCCCeEEccCCCCceEEEecccccccCH
Q 002031 281 QIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 320 (977)
Q Consensus 281 ~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 320 (977)
.+|..|++|+|+||+||+++.+ +.++|+|||.+..+..
T Consensus 117 ~lH~~~i~H~dl~p~Nill~~~--~~~~L~dfg~~~~~~~ 154 (262)
T cd05071 117 YVERMNYVHRDLRAANILVGEN--LVCKVADFGLARLIED 154 (262)
T ss_pred HHHHCCccccccCcccEEEcCC--CcEEeccCCceeeccc
Confidence 8999999999999999999865 8899999999987754
|
Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is invo |
| >cd05114 PTKc_Tec_Rlk Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase | Back alignment and domain information |
|---|
Probab=99.21 E-value=5.2e-11 Score=129.07 Aligned_cols=139 Identities=21% Similarity=0.200 Sum_probs=94.0
Q ss_pred cccccccccEEEEEEecCCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCcHHHHH
Q 002031 124 TPLATASIAQVHRATLVDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEAE 203 (977)
Q Consensus 124 ~piasaSigqV~~A~l~~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea~ 203 (977)
+.||.|++|.||+|+.+++..||+|..+.+-. .+-+|.+|+.
T Consensus 10 ~~lg~G~~~~vy~~~~~~~~~~a~K~~~~~~~--------------------------------------~~~~~~~e~~ 51 (256)
T cd05114 10 KELGSGQFGVVHLGKWRAQIKVAIKAINEGAM--------------------------------------SEEDFIEEAK 51 (256)
T ss_pred eEecCCcCceEEEEEeccCceEEEEecccCCc--------------------------------------cHHHHHHHHH
Confidence 56999999999999998888999997653211 0113445555
Q ss_pred HHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeee-cCCceEEeeccCCCCCCChHHHHhcCCCHHHHHHHHHHHH--HH
Q 002031 204 NTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--AH 280 (977)
Q Consensus 204 n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~--l~ 280 (977)
-+.++.+ ..-+.+...+. ....++||||++|.+|.+.........+...+...+.++. +.
T Consensus 52 ~l~~l~h-----------------~~i~~~~~~~~~~~~~~iv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~ 114 (256)
T cd05114 52 VMMKLSH-----------------PKLVQLYGVCTQQKPLYIVTEFMENGCLLNYLRQRQGKLSKDMLLSMCQDVCEGME 114 (256)
T ss_pred HHHHCCC-----------------CCceeEEEEEccCCCEEEEEEcCCCCcHHHHHHhCccCCCHHHHHHHHHHHHHHHH
Confidence 5554422 00112222222 4556899999999999876432222345444444444443 67
Q ss_pred HHHhcCccccCCCCCCeEEccCCCCceEEEecccccccC
Q 002031 281 QIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 319 (977)
Q Consensus 281 ~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~ 319 (977)
.+|..|++|+|++|+||+++.+ +.++|+|||.+..+.
T Consensus 115 ~lH~~~i~H~dl~p~ni~i~~~--~~~kl~d~g~~~~~~ 151 (256)
T cd05114 115 YLERNSFIHRDLAARNCLVSST--GVVKVSDFGMTRYVL 151 (256)
T ss_pred HHHHCCccccccCcceEEEcCC--CeEEECCCCCccccC
Confidence 8999999999999999999855 889999999987653
|
Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin h |
| >PTZ00267 NIMA-related protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.21 E-value=4.5e-11 Score=142.14 Aligned_cols=139 Identities=18% Similarity=0.126 Sum_probs=93.2
Q ss_pred ccccccccccEEEEEEec-C-CCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCcHH
Q 002031 123 ETPLATASIAQVHRATLV-D-GRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNS 200 (977)
Q Consensus 123 ~~piasaSigqV~~A~l~-~-G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~ 200 (977)
.+.+|.|++|.||+|... + ++.||+|......... ...+++
T Consensus 72 ~~~lg~G~~g~vy~a~~~~~~~~~vv~K~~~~~~~~~-------------------------------------~~~~~~ 114 (478)
T PTZ00267 72 TTLVGRNPTTAAFVATRGSDPKEKVVAKFVMLNDERQ-------------------------------------AAYARS 114 (478)
T ss_pred EEEEEeCCCcEEEEEEEcCCCCeEEEEEEcccCCHHH-------------------------------------HHHHHH
Confidence 367999999999999864 4 6889999643221100 001234
Q ss_pred HHHHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeee----cCCceEEeeccCCCCCCChHHH--H-hcCCCHHHHHHH
Q 002031 201 EAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ----SSETVLILEFMDGIRLNDCESL--E-AFGVNKQKVVEE 273 (977)
Q Consensus 201 Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~----~~~~vLVmE~i~G~~L~~~~~~--~-~~~~~~~~l~~~ 273 (977)
|+..+..+.+ ..|++++. ....+|||||++|++|.+.... . ...++...+...
T Consensus 115 E~~~l~~l~H--------------------pniv~~~~~~~~~~~~~lv~E~~~gg~L~~~l~~~~~~~~~l~~~~~~~i 174 (478)
T PTZ00267 115 ELHCLAACDH--------------------FGIVKHFDDFKSDDKLLLIMEYGSGGDLNKQIKQRLKEHLPFQEYEVGLL 174 (478)
T ss_pred HHHHHHhCCC--------------------CCEeEEEEEEEECCEEEEEEECCCCCCHHHHHHHHHhccCCCCHHHHHHH
Confidence 5554444322 22344432 4667999999999999875321 1 122444444444
Q ss_pred HHHHH--HHHHHhcCccccCCCCCCeEEccCCCCceEEEecccccccCH
Q 002031 274 ITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 320 (977)
Q Consensus 274 l~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 320 (977)
+.++. +..+|..|++||||||.|||++.+ +.++|+|||++..+..
T Consensus 175 ~~qi~~aL~~lH~~~ivHrDlkp~NIll~~~--~~~kL~DFgla~~~~~ 221 (478)
T PTZ00267 175 FYQIVLALDEVHSRKMMHRDLKSANIFLMPT--GIIKLGDFGFSKQYSD 221 (478)
T ss_pred HHHHHHHHHHHHhCCEEECCcCHHhEEECCC--CcEEEEeCcCceecCC
Confidence 44433 788999999999999999999865 8999999999987754
|
|
| >cd05067 PTKc_Lck_Blk Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk | Back alignment and domain information |
|---|
Probab=99.21 E-value=5.1e-11 Score=129.45 Aligned_cols=139 Identities=19% Similarity=0.223 Sum_probs=96.1
Q ss_pred cccccccccEEEEEEecCCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCcHHHHH
Q 002031 124 TPLATASIAQVHRATLVDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEAE 203 (977)
Q Consensus 124 ~piasaSigqV~~A~l~~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea~ 203 (977)
+.||+|++|.||+|..++++.||||+.+...... -++.+|..
T Consensus 12 ~~ig~G~~g~v~~~~~~~~~~~a~K~~~~~~~~~--------------------------------------~~~~~E~~ 53 (260)
T cd05067 12 KKLGAGQFGEVWMGYYNGHTKVAIKSLKQGSMSP--------------------------------------EAFLAEAN 53 (260)
T ss_pred eeeccCccceEEeeecCCCceEEEEEecCCCCcH--------------------------------------HHHHHHHH
Confidence 5699999999999999899999999876432110 02344554
Q ss_pred HHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeeecCCceEEeeccCCCCCCChHHHH-hcCCCHHHHHHHHHHHH--HH
Q 002031 204 NTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQSSETVLILEFMDGIRLNDCESLE-AFGVNKQKVVEEITRAY--AH 280 (977)
Q Consensus 204 n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~~~~~vLVmE~i~G~~L~~~~~~~-~~~~~~~~l~~~l~~~~--l~ 280 (977)
.+.++.+ ...+.+..++.....+++|||++|.+|.+..... ....+...+...+.+++ +.
T Consensus 54 ~l~~l~h-----------------~~i~~~~~~~~~~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~i~~~i~~al~ 116 (260)
T cd05067 54 LMKQLQH-----------------PRLVRLYAVVTQEPIYIITEYMENGSLVDFLKTPEGIKLTINKLIDMAAQIAEGMA 116 (260)
T ss_pred HHHhcCC-----------------cCeeeEEEEEccCCcEEEEEcCCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHH
Confidence 4444422 1112222333345679999999999988764321 12344455554444444 78
Q ss_pred HHHhcCccccCCCCCCeEEccCCCCceEEEecccccccC
Q 002031 281 QIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 319 (977)
Q Consensus 281 ~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~ 319 (977)
.+|..|++|+|+||.||+++.+ +.+.|+|||++..+.
T Consensus 117 ~LH~~~i~H~dl~p~ni~i~~~--~~~~l~dfg~~~~~~ 153 (260)
T cd05067 117 FIERKNYIHRDLRAANILVSET--LCCKIADFGLARLIE 153 (260)
T ss_pred HHhcCCeecccccHHhEEEcCC--CCEEEccCcceeecC
Confidence 8999999999999999999865 889999999998765
|
Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Sr |
| >PF00069 Pkinase: Protein kinase domain Protein kinase; unclassified specificity | Back alignment and domain information |
|---|
Probab=99.21 E-value=4.5e-11 Score=129.38 Aligned_cols=140 Identities=20% Similarity=0.262 Sum_probs=97.4
Q ss_pred cccccccccEEEEEEec-CCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCcHHHH
Q 002031 124 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (977)
Q Consensus 124 ~piasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea 202 (977)
+.||+|++|.||+|+.. +++.||+|+....-...-... ...+|+
T Consensus 5 ~~lg~G~~g~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~-----------------------------------~~~~e~ 49 (260)
T PF00069_consen 5 KKLGSGGFGTVYKAKNKKNGQKVAVKIIDKSEIEEEERE-----------------------------------ENIREI 49 (260)
T ss_dssp EEEEEESSEEEEEEEETTTTEEEEEEEEESTTHHHHHHH-----------------------------------HHHHHH
T ss_pred EEEEeCCCEEEEEEEECCCCeEEEEEEeccccccccccc-----------------------------------hhhhhh
Confidence 57999999999999985 677999999865432211000 011255
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeee-cCCceEEeeccCCCCCCChHHHHhcCCCHHHHHHHHHHHH--H
Q 002031 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--A 279 (977)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~--l 279 (977)
..+.++++ ..-+.+-.++. ....++|||+++|.+|.++.. ....++...+...+.+++ +
T Consensus 50 ~~~~~l~~-----------------~~i~~~~~~~~~~~~~~~v~~~~~~~~L~~~l~-~~~~~~~~~~~~~~~qi~~~L 111 (260)
T PF00069_consen 50 KILRRLRH-----------------PNIVQILDVFQDDNYLYIVMEYCPGGSLQDYLQ-KNKPLSEEEILKIAYQILEAL 111 (260)
T ss_dssp HHHHHHTB-----------------TTBCHEEEEEEESSEEEEEEEEETTEBHHHHHH-HHSSBBHHHHHHHHHHHHHHH
T ss_pred hccccccc-----------------ccccccccccccccccccccccccccccccccc-ccccccccccccccccccccc
Confidence 55555532 11122223332 566789999999988887654 344556666666555554 8
Q ss_pred HHHHhcCccccCCCCCCeEEccCCCCceEEEeccccccc
Q 002031 280 HQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKL 318 (977)
Q Consensus 280 ~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l 318 (977)
..+|..|++|+|+||.||+++.+ ++++|+|||++..+
T Consensus 112 ~~Lh~~~i~H~dikp~NIl~~~~--~~~~l~Dfg~~~~~ 148 (260)
T PF00069_consen 112 AYLHSKGIVHRDIKPENILLDEN--GEVKLIDFGSSVKL 148 (260)
T ss_dssp HHHHHTTEEESSBSGGGEEESTT--SEEEESSGTTTEES
T ss_pred ccccccccccccccccccccccc--cccccccccccccc
Confidence 89999999999999999999955 89999999998753
|
Serine/Threonine protein kinases, catalytic domain Tyrosine kinase, catalytic domain; InterPro: IPR017442 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Eukaryotic protein kinases [, , , , ] are enzymes that belong to a very extensive family of proteins which share a conserved catalytic core common with both serine/threonine and tyrosine protein kinases. There are a number of conserved regions in the catalytic domain of protein kinases. In the N-terminal extremity of the catalytic domain there is a glycine-rich stretch of residues in the vicinity of a lysine residue, which has been shown to be involved in ATP binding. In the central part of the catalytic domain there is a conserved aspartic acid residue which is important for the catalytic activity of the enzyme []. This entry includes protein kinases from eukaryotes and viruses and may include some bacterial hits too.; GO: 0004672 protein kinase activity, 0005524 ATP binding, 0006468 protein phosphorylation; PDB: 3GC7_A 3ZYA_A 3MPT_A 3NEW_A 3MVM_A 1R3C_A 2FST_X 3E93_A 3HV5_B 3OCG_A .... |
| >cd06635 STKc_TAO1 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1 | Back alignment and domain information |
|---|
Probab=99.21 E-value=9.4e-11 Score=131.67 Aligned_cols=160 Identities=18% Similarity=0.164 Sum_probs=104.0
Q ss_pred HHHHHhCCChhhcccccCccccccccccEEEEEEec-CCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCch
Q 002031 105 TIEREFGESMGGMFMDFVETPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNP 183 (977)
Q Consensus 105 ~l~~elg~~~~~~f~~~d~~piasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~ 183 (977)
+...-++.++.+.|... +.||+|++|+||+|+.. +|+.||||+....-.... +
T Consensus 14 ~~~~~~~~~~~~~f~~~--~~lg~G~~~~v~~~~~~~~~~~valK~~~~~~~~~~--~---------------------- 67 (317)
T cd06635 14 IAELFFKEDPEKLFTDL--REIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSN--E---------------------- 67 (317)
T ss_pred HHHHhcCCCchhhhhhh--heeccCCCeEEEEEEEcCCCcEEEEEEEecCCCCch--H----------------------
Confidence 34455677888887754 56999999999999974 789999998753211000 0
Q ss_pred hHHHHhhhcccccCcHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeee-cCCceEEeeccCCCCCCChHHHHh
Q 002031 184 IIDEWCKEAPKELDFNSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLEA 262 (977)
Q Consensus 184 ~~~e~~~~l~~Eld~~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLVmE~i~G~~L~~~~~~~~ 262 (977)
...++.+|++.+.++.+ ...+.+...+. ....+|||||+.| ++.+......
T Consensus 68 ----------~~~~~~~e~~~l~~l~h-----------------~~iv~~~~~~~~~~~~~lv~e~~~g-~l~~~~~~~~ 119 (317)
T cd06635 68 ----------KWQDIIKEVKFLQRIKH-----------------PNSIEYKGCYLREHTAWLVMEYCLG-SASDLLEVHK 119 (317)
T ss_pred ----------HHHHHHHHHHHHHhCCC-----------------CCEEEEEEEEeeCCeEEEEEeCCCC-CHHHHHHHhc
Confidence 00123445554444422 11122222222 4567899999987 5555433333
Q ss_pred cCCCHHHHHHHHHHHH--HHHHHhcCccccCCCCCCeEEccCCCCceEEEecccccccCH
Q 002031 263 FGVNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 320 (977)
Q Consensus 263 ~~~~~~~l~~~l~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 320 (977)
..++...+...+.+++ +..+|..|++|+|++|+||+++.+ +.++|+|||++.....
T Consensus 120 ~~l~~~~~~~i~~~i~~~l~~lH~~~i~H~dL~p~Nil~~~~--~~~kl~dfg~~~~~~~ 177 (317)
T cd06635 120 KPLQEVEIAAITHGALQGLAYLHSHNMIHRDIKAGNILLTEP--GQVKLADFGSASIASP 177 (317)
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCcccEEECCC--CCEEEecCCCccccCC
Confidence 3455555555444443 778899999999999999999865 8899999999876543
|
Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuron |
| >cd05108 PTKc_EGFR Catalytic domain of the Protein Tyrosine Kinase, Epidermal Growth Factor Receptor | Back alignment and domain information |
|---|
Probab=99.20 E-value=6.7e-11 Score=132.79 Aligned_cols=80 Identities=21% Similarity=0.172 Sum_probs=61.5
Q ss_pred cCCceEEeeccCCCCCCChHHHHhcCCCHHHHHHHHHHHH--HHHHHhcCccccCCCCCCeEEccCCCCceEEEeccccc
Q 002031 239 SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTK 316 (977)
Q Consensus 239 ~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~ 316 (977)
....+++|||+++++|.+........++...+...+.++. +..+|..|++|+|+||.|||++.+ +.++|+|||++.
T Consensus 80 ~~~~~~v~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~qi~~~L~~LH~~~iiH~dlkp~Nill~~~--~~~kl~DfG~a~ 157 (316)
T cd05108 80 TSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEERRLVHRDLAARNVLVKTP--QHVKITDFGLAK 157 (316)
T ss_pred CCCceeeeecCCCCCHHHHHHhccccCCHHHHHHHHHHHHHHHHHHHhcCeeccccchhheEecCC--CcEEEccccccc
Confidence 4556899999999998876433222345555555555544 788999999999999999999865 789999999998
Q ss_pred ccCH
Q 002031 317 KLSS 320 (977)
Q Consensus 317 ~l~~ 320 (977)
.+..
T Consensus 158 ~~~~ 161 (316)
T cd05108 158 LLGA 161 (316)
T ss_pred cccC
Confidence 7653
|
Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EGFR (HER1, ErbB1) is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphor |
| >cd06629 STKc_MAPKKK_Bck1_like Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases | Back alignment and domain information |
|---|
Probab=99.20 E-value=1e-10 Score=127.83 Aligned_cols=152 Identities=20% Similarity=0.193 Sum_probs=95.3
Q ss_pred ccccCccccccccccEEEEEEec-CCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhccccc
Q 002031 118 FMDFVETPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKEL 196 (977)
Q Consensus 118 f~~~d~~piasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~El 196 (977)
|.++..++||+|++|+||+|... +|+.||||..+.........+.. ..+..+
T Consensus 1 ~~~~~~~~lg~g~~~~vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~---------------------~~~~~~------ 53 (272)
T cd06629 1 FKWVKGELIGKGTYGRVYLALNVTTGEMMAVKQVELPATIAGRHDSR---------------------QKDMVK------ 53 (272)
T ss_pred CceeecceecccCceEEEEEeecCCCceeeeeeeechhhhhcccchH---------------------HHHHHH------
Confidence 45666789999999999999864 79999999765321111000000 000000
Q ss_pred CcHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceee---e-cCCceEEeeccCCCCCCChHHHHhcCCCHHHHHH
Q 002031 197 DFNSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVI---Q-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVE 272 (977)
Q Consensus 197 d~~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~---~-~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~ 272 (977)
.+..|+..+..+.+ ..+++++ . ....++||||++|.+|.+..... ..++...+..
T Consensus 54 ~~~~e~~~l~~l~h--------------------~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~-~~l~~~~~~~ 112 (272)
T cd06629 54 ALRSEIETLKDLDH--------------------LNIVQYLGFETTEEYLSIFLEYVPGGSIGSCLRTY-GRFEEQLVRF 112 (272)
T ss_pred HHHHHHHHHHhcCC--------------------CCcceEEEEeccCCceEEEEecCCCCcHHHHHhhc-cCCCHHHHHH
Confidence 23344444443321 1122333 2 45678999999999998764321 2334333333
Q ss_pred HHHHHH--HHHHHhcCccccCCCCCCeEEccCCCCceEEEecccccccC
Q 002031 273 EITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 319 (977)
Q Consensus 273 ~l~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~ 319 (977)
.+.+++ +..+|..|++|+|++|+||+++.+ +.++|+|||++....
T Consensus 113 ~~~qi~~~l~~lH~~~i~H~dl~~~nil~~~~--~~~~l~d~~~~~~~~ 159 (272)
T cd06629 113 FTEQVLEGLAYLHSKGILHRDLKADNLLVDAD--GICKISDFGISKKSD 159 (272)
T ss_pred HHHHHHHHHHHHhhCCeeecCCChhhEEEcCC--CeEEEeecccccccc
Confidence 322322 678899999999999999999855 899999999987654
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell inte |
| >cd07848 STKc_CDKL5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase Like 5 | Back alignment and domain information |
|---|
Probab=99.20 E-value=3.8e-11 Score=132.43 Aligned_cols=142 Identities=20% Similarity=0.215 Sum_probs=91.2
Q ss_pred cccccccccEEEEEEec-CCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCcHHHH
Q 002031 124 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (977)
Q Consensus 124 ~piasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea 202 (977)
+.||+|++|.||+|+.+ +++.||||+.+....... . .-.+.+|.
T Consensus 7 ~~lg~g~~~~v~~~~~~~~~~~~avK~~~~~~~~~~-------------------------~----------~~~~~~E~ 51 (287)
T cd07848 7 GVVGEGAYGVVLKCRHKETKEIVAIKKFKDSEENEE-------------------------V----------KETTLREL 51 (287)
T ss_pred EEecccCCEEEEEEEECCCCcEEEEEEEeccccccc-------------------------c----------hhhHHHHH
Confidence 56899999999999985 789999998754311000 0 00122333
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeee-cCCceEEeeccCCCCCCChHHHHhcCCCHHHHHHHHHHHH--H
Q 002031 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--A 279 (977)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~--l 279 (977)
..+.++.+ ..-+.+..++. ....++||||++|..+..+.. ...+++...+...+.+++ +
T Consensus 52 ~~l~~l~h-----------------~~iv~~~~~~~~~~~~~lv~e~~~~~~l~~~~~-~~~~~~~~~~~~~~~qi~~~L 113 (287)
T cd07848 52 KMLRTLKQ-----------------ENIVELKEAFRRRGKLYLVFEYVEKNMLELLEE-MPNGVPPEKVRSYIYQLIKAI 113 (287)
T ss_pred HHHHhCCC-----------------ccccchhhhEecCCEEEEEEecCCCCHHHHHHh-cCCCCCHHHHHHHHHHHHHHH
Confidence 33333321 00111222222 345689999999876654321 123455555555555544 7
Q ss_pred HHHHhcCccccCCCCCCeEEccCCCCceEEEecccccccCH
Q 002031 280 HQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 320 (977)
Q Consensus 280 ~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 320 (977)
..+|..|++|+|+||.||+++.+ +.++|+|||++..+..
T Consensus 114 ~~lH~~~i~H~dlkp~Nill~~~--~~~kl~Dfg~~~~~~~ 152 (287)
T cd07848 114 HWCHKNDIVHRDIKPENLLISHN--DVLKLCDFGFARNLSE 152 (287)
T ss_pred HHHHHCCeecCCCCHHHEEEcCC--CcEEEeeccCcccccc
Confidence 88899999999999999999865 8999999999887643
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 5 (CDKL5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Mutations in the gene encoding CDKL5, previously called STK9, are associated with early onset epilepsy and severe mental retardation [X-linked infantile spasm syndrome (ISSX) or West syndrome]. In addition, CDKL5 mutations also sometimes |
| >cd05059 PTKc_Tec_like Catalytic domain of Tec-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=99.20 E-value=5.4e-11 Score=129.04 Aligned_cols=136 Identities=19% Similarity=0.228 Sum_probs=93.3
Q ss_pred cccccccccEEEEEEecCCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCcHHHHH
Q 002031 124 TPLATASIAQVHRATLVDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEAE 203 (977)
Q Consensus 124 ~piasaSigqV~~A~l~~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea~ 203 (977)
+.||.|++|.||+|+.++++.+|||+..++... +-+|..|..
T Consensus 10 ~~lg~G~~~~v~~~~~~~~~~~~iK~~~~~~~~--------------------------------------~~~~~~e~~ 51 (256)
T cd05059 10 KELGSGQFGVVHLGKWRGKIDVAIKMIREGAMS--------------------------------------EDDFIEEAK 51 (256)
T ss_pred hhhccCCCceEEEeEecCCccEEEEEeccCCCC--------------------------------------HHHHHHHHH
Confidence 569999999999999887889999986543210 002333444
Q ss_pred HHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeee----cCCceEEeeccCCCCCCChHHHHhcCCCHHHHHHHHHHHH-
Q 002031 204 NTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ----SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY- 278 (977)
Q Consensus 204 n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~----~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~- 278 (977)
.+.++.+ + .|.+++. ....++||||++|.+|.+.........+...+...+.++.
T Consensus 52 ~l~~l~~------------------~--~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~ 111 (256)
T cd05059 52 VMMKLSH------------------P--NLVQLYGVCTKQRPIFIVTEYMANGCLLNYLRERKGKLGTEWLLDMCSDVCE 111 (256)
T ss_pred HHHhCCC------------------C--CEEEEEEEEcCCCceEEEEecCCCCCHHHHHHhcccCCCHHHHHHHHHHHHH
Confidence 4433321 1 1333332 4557899999999999876433222344555444444433
Q ss_pred -HHHHHhcCccccCCCCCCeEEccCCCCceEEEecccccccC
Q 002031 279 -AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 319 (977)
Q Consensus 279 -l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~ 319 (977)
+..+|..|++|+|+||.||+++.+ +.++|+|||++..+.
T Consensus 112 ~l~~lH~~~i~H~dl~p~ni~i~~~--~~~kl~dfg~~~~~~ 151 (256)
T cd05059 112 AMEYLESNGFIHRDLAARNCLVGED--NVVKVSDFGLARYVL 151 (256)
T ss_pred HHHHHHHCCcccccccHhhEEECCC--CcEEECCcccceecc
Confidence 678899999999999999999865 889999999987653
|
Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows |
| >cd05064 PTKc_EphR_A10 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A10 | Back alignment and domain information |
|---|
Probab=99.20 E-value=6.7e-11 Score=129.19 Aligned_cols=140 Identities=14% Similarity=0.102 Sum_probs=93.2
Q ss_pred cccccccccEEEEEEec----CCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCcH
Q 002031 124 TPLATASIAQVHRATLV----DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFN 199 (977)
Q Consensus 124 ~piasaSigqV~~A~l~----~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~ 199 (977)
+.||+|++|+||+|+++ .+..||+|+.+.+...... .+|.
T Consensus 11 ~~ig~G~fg~V~~~~~~~~~~~~~~vaik~~~~~~~~~~~------------------------------------~~~~ 54 (266)
T cd05064 11 RILGTGRFGELCRGCLKLPSKRELPVAIHTLRAGCSDKQR------------------------------------RGFL 54 (266)
T ss_pred eeecccCCCeEEEEEEecCCCceeeEEEEecCCCCCHHHH------------------------------------HHHH
Confidence 56999999999999863 4678999987654221100 1233
Q ss_pred HHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeee-cCCceEEeeccCCCCCCChHHHHhcCCCHHHHHHHHHHHH
Q 002031 200 SEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY 278 (977)
Q Consensus 200 ~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~ 278 (977)
+|...+.++.+ ..-+.+-..+. ....+|||||++|.+|.++.......+....+...+.+++
T Consensus 55 ~e~~~l~~l~h-----------------~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~l~~~~~~~~~~~i~ 117 (266)
T cd05064 55 AEALTLGQFDH-----------------SNIVRLEGVITRGNTMMIVTEYMSNGALDSFLRKHEGQLVAGQLMGMLPGLA 117 (266)
T ss_pred HHHHHHhcCCC-----------------CCcCeEEEEEecCCCcEEEEEeCCCCcHHHHHHhCCCCCCHHHHHHHHHHHH
Confidence 45444443321 11122222222 4567899999999999877543222345555555554444
Q ss_pred --HHHHHhcCccccCCCCCCeEEccCCCCceEEEeccccccc
Q 002031 279 --AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKL 318 (977)
Q Consensus 279 --l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l 318 (977)
+..+|..|++|+|+||.||+++.+ +.+++.|||.....
T Consensus 118 ~al~~lH~~~iiH~dikp~nili~~~--~~~~l~dfg~~~~~ 157 (266)
T cd05064 118 SGMKYLSEMGYVHKGLAAHKVLVNSD--LVCKISGFRRLQED 157 (266)
T ss_pred HHHHHHHHCCEeeccccHhhEEEcCC--CcEEECCCcccccc
Confidence 778999999999999999999865 88999999976554
|
Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA10 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchor |
| >cd06644 STKc_STK10_LOK Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase | Back alignment and domain information |
|---|
Probab=99.20 E-value=8.5e-11 Score=130.19 Aligned_cols=146 Identities=16% Similarity=0.159 Sum_probs=96.1
Q ss_pred hhcccccCccccccccccEEEEEEec-CCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcc
Q 002031 115 GGMFMDFVETPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAP 193 (977)
Q Consensus 115 ~~~f~~~d~~piasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~ 193 (977)
.+.|+.. +.||.|++|.||+|+.. +|+.|++|+.........
T Consensus 11 ~~~y~i~--~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~~~~~~----------------------------------- 53 (292)
T cd06644 11 NEVWEII--GELGDGAFGKVYKAKNKETGALAAAKVIETKSEEEL----------------------------------- 53 (292)
T ss_pred chhhhhh--heecCCCCeEEEEEEECCCCceEEEEEeccCCHHHH-----------------------------------
Confidence 3444433 45999999999999975 689999998754322110
Q ss_pred cccCcHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeee-cCCceEEeeccCCCCCCChHHHHhcCCCHHHHHH
Q 002031 194 KELDFNSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVE 272 (977)
Q Consensus 194 ~Eld~~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~ 272 (977)
-++.+|...+..+.+ ..-+.+-..+. ....++||||++|.++..........++...+..
T Consensus 54 --~~~~~e~~~l~~l~h-----------------~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~l~~~~~~~ 114 (292)
T cd06644 54 --EDYMVEIEILATCNH-----------------PYIVKLLGAFYWDGKLWIMIEFCPGGAVDAIMLELDRGLTEPQIQV 114 (292)
T ss_pred --HHHHHHHHHHHhCCC-----------------CcEeeeEEEEEeCCeEEEEEecCCCCcHHHHHHhhcCCCCHHHHHH
Confidence 023344444444322 01122222222 5667999999999988665322233455555555
Q ss_pred HHHHHH--HHHHHhcCccccCCCCCCeEEccCCCCceEEEeccccccc
Q 002031 273 EITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKL 318 (977)
Q Consensus 273 ~l~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l 318 (977)
.+.++. +..+|..|++|+|+||.||+++.+ ++++|+|||++...
T Consensus 115 ~~~ql~~~l~~lH~~~i~H~dlkp~Nili~~~--~~~kl~dfg~~~~~ 160 (292)
T cd06644 115 ICRQMLEALQYLHSMKIIHRDLKAGNVLLTLD--GDIKLADFGVSAKN 160 (292)
T ss_pred HHHHHHHHHHHHhcCCeeecCCCcceEEEcCC--CCEEEccCccceec
Confidence 444443 678899999999999999999855 89999999987654
|
Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types. |
| >KOG0201 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.20 E-value=7.3e-12 Score=137.99 Aligned_cols=154 Identities=16% Similarity=0.247 Sum_probs=101.2
Q ss_pred ChhhcccccCccccccccccEEEEEEe-cCCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhh
Q 002031 113 SMGGMFMDFVETPLATASIAQVHRATL-VDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKE 191 (977)
Q Consensus 113 ~~~~~f~~~d~~piasaSigqV~~A~l-~~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~ 191 (977)
++...|..+ +-||.||||.||+|.. ++++.||+||..-+..+....|+
T Consensus 10 ~~~~~~~~~--~~IgrGsfG~Vyk~~d~~t~k~vAiKii~Le~~~deIedi----------------------------- 58 (467)
T KOG0201|consen 10 DPELLYTKL--ELIGRGSFGEVYKAIDNKTKKVVAIKIIDLEEAEDEIEDI----------------------------- 58 (467)
T ss_pred Ccccccccc--hhccccccceeeeeeeccccceEEEEEechhhcchhhHHH-----------------------------
Confidence 455667766 4699999999999997 58999999997532211111111
Q ss_pred cccccCcHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeeecCCceEEeeccCCCCCCChHHHHhcCC-CHHHH
Q 002031 192 APKELDFNSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQSSETVLILEFMDGIRLNDCESLEAFGV-NKQKV 270 (977)
Q Consensus 192 l~~Eld~~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~~~~~vLVmE~i~G~~L~~~~~~~~~~~-~~~~l 270 (977)
.+|+.+..+.+. ..+-+++. ..+..+.-+++|||+.|+++.+... ..++ +...+
T Consensus 59 -qqei~~Ls~~~~-~~it~yyg---------------------syl~g~~LwiiMey~~gGsv~~lL~--~~~~~~E~~i 113 (467)
T KOG0201|consen 59 -QQEISVLSQCDS-PNITEYYG---------------------SYLKGTKLWIIMEYCGGGSVLDLLK--SGNILDEFEI 113 (467)
T ss_pred -HHHHHHHHhcCc-chHHhhhh---------------------heeecccHHHHHHHhcCcchhhhhc--cCCCCcccee
Confidence 111211111111 11111111 0112566789999999999998744 3333 44444
Q ss_pred HHHHHHHH--HHHHHhcCccccCCCCCCeEEccCCCCceEEEecccccccCHHHHH
Q 002031 271 VEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSSSMKQ 324 (977)
Q Consensus 271 ~~~l~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~~~r~ 324 (977)
+..+.+.. +..+|.++.+|+|+|+.||++..+ |.++|.|||.+.+++.....
T Consensus 114 ~~ilre~l~~l~ylH~~~kiHrDIKaanil~s~~--g~vkl~DfgVa~ql~~~~~r 167 (467)
T KOG0201|consen 114 AVILREVLKGLDYLHSEKKIHRDIKAANILLSES--GDVKLADFGVAGQLTNTVKR 167 (467)
T ss_pred eeehHHHHHHhhhhhhcceecccccccceeEecc--CcEEEEecceeeeeechhhc
Confidence 44444433 888999999999999999999976 89999999999999876544
|
|
| >KOG1989 consensus ARK protein kinase family [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.20 E-value=4.6e-11 Score=142.34 Aligned_cols=124 Identities=14% Similarity=0.132 Sum_probs=83.2
Q ss_pred eEEeeccCCCCCCChHHH-HhcCCCHHHHHHHHHHHH--HHHHHhcC--ccccCCCCCCeEEccCCCCceEEEecccccc
Q 002031 243 VLILEFMDGIRLNDCESL-EAFGVNKQKVVEEITRAY--AHQIYVDG--FFNGDPHPGNFLVSKDPPHRPILLDFGLTKK 317 (977)
Q Consensus 243 vLVmE~i~G~~L~~~~~~-~~~~~~~~~l~~~l~~~~--l~~i~~~G--~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~ 317 (977)
.|.||||.|..|-|+..- ...++...++++++.+.+ +..+|... ++|||||-+|||+..+ |..+|||||.+..
T Consensus 118 llLmEyC~gg~Lvd~mn~Rlq~~lte~eVLkIf~dv~~AVa~mH~~~pPiIHRDLKiENvLls~~--g~~KLCDFGSatt 195 (738)
T KOG1989|consen 118 LLLMEYCKGGSLVDFMNTRLQTRLTEDEVLKIFYDVCEAVAAMHYLKPPIIHRDLKIENVLLSAD--GNYKLCDFGSATT 195 (738)
T ss_pred EeehhhccCCcHHHHHHHHHhccCChHHHHHHHHHHHHHHHHHhcCCCccchhhhhhhheEEcCC--CCEEeCccccccc
Confidence 589999999888887542 233477788888877766 67788877 9999999999999965 8999999999875
Q ss_pred cCH-----HHHHHHHHHHHHH--HcCCHHHHHHHHHHcCcccCCCcHHHHHHHHHHHH
Q 002031 318 LSS-----SMKQALAKMFFAA--AEGDHVALLSAFAEMGLRLRLDVPEQAMEVSTLFF 368 (977)
Q Consensus 318 l~~-----~~r~~~~~l~~a~--~~~d~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~ 368 (977)
... ..+..+-.=+..- ......+|++.+..+++..+.|+=+.-.-+..++|
T Consensus 196 ~~~~~~~~~e~~~ve~eI~k~TTp~YRsPEMIDlysg~pI~eKsDIWALGclLYkLCy 253 (738)
T KOG1989|consen 196 KILSPTSAQEVNYVEEEIEKYTTPQYRSPEMIDLYSGLPIGEKSDIWALGCLLYKLCY 253 (738)
T ss_pred ccCCCccHHHHHHHHHHHHhhCCccccChHHHhhhcCCCCcchhHHHHHHHHHHHHHH
Confidence 422 2222222222221 22344668898888887654444443333444444
|
|
| >cd07874 STKc_JNK3 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 3 | Back alignment and domain information |
|---|
Probab=99.20 E-value=8.5e-11 Score=134.24 Aligned_cols=73 Identities=22% Similarity=0.444 Sum_probs=53.4
Q ss_pred CceEEeeccCCCCCCChHHHHhcCCCHHHHHHHHHHHH--HHHHHhcCccccCCCCCCeEEccCCCCceEEEeccccccc
Q 002031 241 ETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKL 318 (977)
Q Consensus 241 ~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l 318 (977)
..++||||++|. +.+. + ...++...+...+.+++ +..+|..|++|||+||+||+++.+ +.++|+|||+++..
T Consensus 96 ~~~lv~e~~~~~-l~~~--~-~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDikp~Nill~~~--~~~kl~Dfg~~~~~ 169 (355)
T cd07874 96 DVYLVMELMDAN-LCQV--I-QMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSD--CTLKILDFGLARTA 169 (355)
T ss_pred eeEEEhhhhccc-HHHH--H-hhcCCHHHHHHHHHHHHHHHHHHHhCCcccCCCChHHEEECCC--CCEEEeeCcccccC
Confidence 358999999874 3222 1 12345455444444443 788999999999999999999865 89999999998765
Q ss_pred C
Q 002031 319 S 319 (977)
Q Consensus 319 ~ 319 (977)
.
T Consensus 170 ~ 170 (355)
T cd07874 170 G 170 (355)
T ss_pred C
Confidence 4
|
Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 3 (JNK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK3 is expressed primarily in the brain, and to a lesser extent in the heart and testis. Mice deficient in Jnk3 are protected against kainic acid-induced seizures, strok |
| >cd05079 PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1 | Back alignment and domain information |
|---|
Probab=99.19 E-value=8.8e-11 Score=129.52 Aligned_cols=141 Identities=21% Similarity=0.230 Sum_probs=93.8
Q ss_pred cccccccccEEEEEEe-----cCCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCc
Q 002031 124 TPLATASIAQVHRATL-----VDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDF 198 (977)
Q Consensus 124 ~piasaSigqV~~A~l-----~~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~ 198 (977)
+.||.|++|.||+|+. .+++.||||..++........ ++
T Consensus 10 ~~lg~g~~g~v~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~------------------------------------~~ 53 (284)
T cd05079 10 RDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIA------------------------------------DL 53 (284)
T ss_pred eecCCCCceeEEEEEEccCCCCccceEEEEEcCccccHHHHH------------------------------------HH
Confidence 4599999999999984 368899999877543211100 23
Q ss_pred HHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeee-c--CCceEEeeccCCCCCCChHHHHhcCCCHHHHHHHHH
Q 002031 199 NSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-S--SETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEIT 275 (977)
Q Consensus 199 ~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~--~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~ 275 (977)
.+|...+.++.+ ..-+.+..... . ...++||||++|.+|.++........+...+...+.
T Consensus 54 ~~e~~~l~~l~h-----------------~~i~~~~~~~~~~~~~~~~lv~e~~~g~~L~~~l~~~~~~~~~~~~~~i~~ 116 (284)
T cd05079 54 KKEIEILRNLYH-----------------ENIVKYKGICTEDGGNGIKLIMEFLPSGSLKEYLPRNKNKINLKQQLKYAV 116 (284)
T ss_pred HHHHHHHHhCCC-----------------CCeeeeeeEEecCCCCceEEEEEccCCCCHHHHHHhccCCCCHHHHHHHHH
Confidence 345444444321 11122222222 1 335799999999999877432222345555555444
Q ss_pred HHH--HHHHHhcCccccCCCCCCeEEccCCCCceEEEecccccccC
Q 002031 276 RAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 319 (977)
Q Consensus 276 ~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~ 319 (977)
++. +..+|..|++|+|+||.||+++.+ +.++|+|||++..+.
T Consensus 117 ~i~~aL~~lH~~gi~H~dlkp~Nil~~~~--~~~~l~dfg~~~~~~ 160 (284)
T cd05079 117 QICKGMDYLGSRQYVHRDLAARNVLVESE--HQVKIGDFGLTKAIE 160 (284)
T ss_pred HHHHHHHHHHHCCeeecccchheEEEcCC--CCEEECCCccccccc
Confidence 443 788999999999999999999865 889999999988764
|
Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers a |
| >cd05033 PTKc_EphR Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=99.19 E-value=1.1e-10 Score=127.40 Aligned_cols=142 Identities=20% Similarity=0.223 Sum_probs=96.1
Q ss_pred ccccccccccEEEEEEec----CCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCc
Q 002031 123 ETPLATASIAQVHRATLV----DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDF 198 (977)
Q Consensus 123 ~~piasaSigqV~~A~l~----~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~ 198 (977)
.+.||.|++|.||+|+.+ +...||||+.++....... .+|
T Consensus 9 ~~~lg~g~~g~vy~~~~~~~~~~~~~vaik~~~~~~~~~~~------------------------------------~~~ 52 (266)
T cd05033 9 EKVIGGGEFGEVCRGRLKLPGKKEIDVAIKTLKAGSSDKQR------------------------------------LDF 52 (266)
T ss_pred eeEecCCccceEEEEEEccCCCCcceEEEEEcCCCCChHHH------------------------------------HHH
Confidence 367999999999999974 2457999987654322111 123
Q ss_pred HHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeee-cCCceEEeeccCCCCCCChHHHHhcCCCHHHHHHHHHHH
Q 002031 199 NSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRA 277 (977)
Q Consensus 199 ~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~ 277 (977)
..|...+.++.+ ..-+.+...+. ....++||||++|.+|.++.......++...+...+.++
T Consensus 53 ~~e~~~l~~l~h-----------------~~i~~~~~~~~~~~~~~iv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l 115 (266)
T cd05033 53 LTEASIMGQFDH-----------------PNIIRLEGVVTKSRPVMIITEYMENGSLDKFLRENDGKFTVGQLVGMLRGI 115 (266)
T ss_pred HHHHHHHHhCCC-----------------CCcceEeEEEecCCceEEEEEcCCCCCHHHHHHhccCCCCHHHHHHHHHHH
Confidence 345444444321 01112222222 455689999999999987754322345555655555554
Q ss_pred H--HHHHHhcCccccCCCCCCeEEccCCCCceEEEecccccccC
Q 002031 278 Y--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 319 (977)
Q Consensus 278 ~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~ 319 (977)
+ +..+|..|++|+|+||.||+++.+ +.++|+|||++..+.
T Consensus 116 ~~~l~~Lh~~~i~H~di~p~nili~~~--~~~~l~dfg~~~~~~ 157 (266)
T cd05033 116 ASGMKYLSEMNYVHRDLAARNILVNSN--LVCKVSDFGLSRRLE 157 (266)
T ss_pred HHHHHHHHhCCcccCCCCcceEEEcCC--CCEEECccchhhccc
Confidence 4 778999999999999999999865 889999999998774
|
Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment |
| >cd05112 PTKc_Itk Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase | Back alignment and domain information |
|---|
Probab=99.19 E-value=6.8e-11 Score=127.98 Aligned_cols=136 Identities=19% Similarity=0.235 Sum_probs=93.6
Q ss_pred cccccccccEEEEEEecCCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCcHHHHH
Q 002031 124 TPLATASIAQVHRATLVDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEAE 203 (977)
Q Consensus 124 ~piasaSigqV~~A~l~~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea~ 203 (977)
+.||.|++|+||+|...+++.+|||+.+.+... +-+|..|.+
T Consensus 10 ~~ig~g~~g~v~~~~~~~~~~~~~k~~~~~~~~--------------------------------------~~~~~~e~~ 51 (256)
T cd05112 10 QEIGSGQFGLVWLGYWLEKRKVAIKTIREGAMS--------------------------------------EEDFIEEAQ 51 (256)
T ss_pred eeecCcccceEEEEEEeCCCeEEEEECCCCCCC--------------------------------------HHHHHHHHH
Confidence 579999999999999877889999987543210 112344555
Q ss_pred HHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceee---e-cCCceEEeeccCCCCCCChHHHHhcCCCHHHHHHHHHHHH-
Q 002031 204 NTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVI---Q-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY- 278 (977)
Q Consensus 204 n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~---~-~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~- 278 (977)
.+.++.+ ..+.+++ . ....++||||++|.+|.+.............+...+.+++
T Consensus 52 ~l~~l~~--------------------~~i~~~~~~~~~~~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~ 111 (256)
T cd05112 52 VMMKLSH--------------------PKLVQLYGVCTERSPICLVFEFMEHGCLSDYLRAQRGKFSQETLLGMCLDVCE 111 (256)
T ss_pred HHHhCCC--------------------CCeeeEEEEEccCCceEEEEEcCCCCcHHHHHHhCccCCCHHHHHHHHHHHHH
Confidence 5544421 1122222 2 4567899999999998876432222244444444444433
Q ss_pred -HHHHHhcCccccCCCCCCeEEccCCCCceEEEecccccccC
Q 002031 279 -AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 319 (977)
Q Consensus 279 -l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~ 319 (977)
+..+|..|++|+|+||.||+++.+ +.++|+|||++..+.
T Consensus 112 ~l~~lH~~~i~h~dl~p~ni~i~~~--~~~~l~d~g~~~~~~ 151 (256)
T cd05112 112 GMAYLESSNVIHRDLAARNCLVGEN--QVVKVSDFGMTRFVL 151 (256)
T ss_pred HHHHHHHCCccccccccceEEEcCC--CeEEECCCcceeecc
Confidence 678899999999999999999854 789999999987653
|
Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activ |
| >cd00192 PTKc Catalytic domain of Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=99.19 E-value=9.4e-11 Score=126.60 Aligned_cols=140 Identities=19% Similarity=0.232 Sum_probs=97.6
Q ss_pred cccccccccEEEEEEecC----CCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCcH
Q 002031 124 TPLATASIAQVHRATLVD----GRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFN 199 (977)
Q Consensus 124 ~piasaSigqV~~A~l~~----G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~ 199 (977)
+.||.|++|.||+|+... +..|+||+.++...... . -++.
T Consensus 1 ~~ig~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~~~~~---~---------------------------------~~~~ 44 (262)
T cd00192 1 KKLGEGAFGEVYKGKLKGKDGKTTEVAVKTLKEDASEEE---R---------------------------------KDFL 44 (262)
T ss_pred CccccCCceEEEEEEEecCCCCCceEEeEeeccccchhH---H---------------------------------HHHH
Confidence 368999999999999753 88999999876533210 0 0233
Q ss_pred HHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceee---e-cCCceEEeeccCCCCCCChHHHH--------hcCCCH
Q 002031 200 SEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVI---Q-SSETVLILEFMDGIRLNDCESLE--------AFGVNK 267 (977)
Q Consensus 200 ~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~---~-~~~~vLVmE~i~G~~L~~~~~~~--------~~~~~~ 267 (977)
+|.+.+.++.+ ..+.+++ . ....+++|||++|.+|.+..... ....+.
T Consensus 45 ~e~~~l~~~~~--------------------~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~ 104 (262)
T cd00192 45 KEARVMKKLGH--------------------PNVVRLLGVCTEEEPLYLVLEYMEGGDLLDYLRKSRPVFPSPEKSTLSL 104 (262)
T ss_pred HHHHHHhhcCC--------------------CChheeeeeecCCCceEEEEEeccCCcHHHHHhhccccccccccccCCH
Confidence 44444444421 1122222 1 45568999999999998875432 234556
Q ss_pred HHHHHHHHHHH--HHHHHhcCccccCCCCCCeEEccCCCCceEEEecccccccCHH
Q 002031 268 QKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSSS 321 (977)
Q Consensus 268 ~~l~~~l~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~~ 321 (977)
..+...+.+++ +..+|..|++|+|++|.||+++.+ +.++|+|||.+..+...
T Consensus 105 ~~~~~~~~~l~~al~~lH~~~i~H~di~p~nili~~~--~~~~l~dfg~~~~~~~~ 158 (262)
T cd00192 105 KDLLSFAIQIAKGMEYLASKKFVHRDLAARNCLVGED--LVVKISDFGLSRDVYDD 158 (262)
T ss_pred HHHHHHHHHHHHHHHHHHcCCcccCccCcceEEECCC--CcEEEcccccccccccc
Confidence 66666555544 788999999999999999999965 89999999999877643
|
Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligan |
| >cd05040 PTKc_Ack_like Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase | Back alignment and domain information |
|---|
Probab=99.19 E-value=7e-11 Score=127.91 Aligned_cols=142 Identities=21% Similarity=0.207 Sum_probs=93.1
Q ss_pred cccccccccEEEEEEec--CC--CEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCcH
Q 002031 124 TPLATASIAQVHRATLV--DG--RQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFN 199 (977)
Q Consensus 124 ~piasaSigqV~~A~l~--~G--~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~ 199 (977)
+.||+|++|.||+|... ++ ..||||+.+++...... + ++.
T Consensus 1 ~~ig~g~~~~v~~~~~~~~~~~~~~vaiK~~~~~~~~~~~--------------------------~----------~~~ 44 (257)
T cd05040 1 KKLGDGSFGVVRRGEWSTSGGKVIPVAVKCLKSDKLSDIM--------------------------D----------DFL 44 (257)
T ss_pred CcCCccCcccEEeeeEecCCCCceEEEEeecCCcccHHHH--------------------------H----------HHH
Confidence 35899999999999874 23 36999988765432000 0 233
Q ss_pred HHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeeecCCceEEeeccCCCCCCChHHHHh-cCCCHHHHHHHHHHHH
Q 002031 200 SEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQSSETVLILEFMDGIRLNDCESLEA-FGVNKQKVVEEITRAY 278 (977)
Q Consensus 200 ~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~~~~~vLVmE~i~G~~L~~~~~~~~-~~~~~~~l~~~l~~~~ 278 (977)
+|.+.+.++++ ..-+.+...+.....++||||++|.+|.+...... ...+...+...+.++.
T Consensus 45 ~e~~~l~~l~h-----------------~~iv~~~~~~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~qi~ 107 (257)
T cd05040 45 KEAAIMHSLDH-----------------ENLIRLYGVVLTHPLMMVTELAPLGSLLDRLRKDALGHFLISTLCDYAVQIA 107 (257)
T ss_pred HHHHHHhhcCC-----------------CCccceeEEEcCCeEEEEEEecCCCcHHHHHHhcccccCcHHHHHHHHHHHH
Confidence 44444444422 01122222222355689999999999987643222 2244455554444443
Q ss_pred --HHHHHhcCccccCCCCCCeEEccCCCCceEEEecccccccCH
Q 002031 279 --AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 320 (977)
Q Consensus 279 --l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 320 (977)
+..+|..|++|+|+||.||+++.+ +.++|+|||++..+..
T Consensus 108 ~~L~~lH~~~i~H~di~p~nil~~~~--~~~kl~dfg~~~~~~~ 149 (257)
T cd05040 108 NGMRYLESKRFIHRDLAARNILLASD--DKVKIGDFGLMRALPQ 149 (257)
T ss_pred HHHHHHHhCCccccccCcccEEEecC--CEEEeccccccccccc
Confidence 778899999999999999999966 8999999999887754
|
Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with and |
| >cd06650 PKc_MEK1 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1 | Back alignment and domain information |
|---|
Probab=99.19 E-value=1.1e-10 Score=132.16 Aligned_cols=140 Identities=20% Similarity=0.174 Sum_probs=92.6
Q ss_pred cccccccccEEEEEEec-CCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCcHHHH
Q 002031 124 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (977)
Q Consensus 124 ~piasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea 202 (977)
+.||.|++|.||+|+.+ +|+.||+|+.+........ -.+.+|+
T Consensus 11 ~~lg~g~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~------------------------------------~~~~~E~ 54 (333)
T cd06650 11 SELGAGNGGVVFKVSHKPSGLIMARKLIHLEIKPAIR------------------------------------NQIIREL 54 (333)
T ss_pred ccccCCCCEEEEEEEECCCCcEEEEEEeecccCHHHH------------------------------------HHHHHHH
Confidence 56999999999999985 7899999987654321110 0234455
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeee-cCCceEEeeccCCCCCCChHHHHhcCCCHHHHHHHHHHHH--H
Q 002031 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--A 279 (977)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~--l 279 (977)
+.+..+.+ ..-+.+-..+. ....+|||||++|.+|.++... ....+...+.....+++ +
T Consensus 55 ~~l~~l~h-----------------~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~-~~~~~~~~~~~~~~~l~~~l 116 (333)
T cd06650 55 QVLHECNS-----------------PYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKK-AGRIPEQILGKVSIAVIKGL 116 (333)
T ss_pred HHHHHCCC-----------------CcccceeEEEEECCEEEEEEecCCCCcHHHHHHH-cCCCCHHHHHHHHHHHHHHH
Confidence 55554432 01122222332 4567899999999999887432 12234444333333332 5
Q ss_pred HHHHh-cCccccCCCCCCeEEccCCCCceEEEecccccccC
Q 002031 280 HQIYV-DGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 319 (977)
Q Consensus 280 ~~i~~-~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~ 319 (977)
..+|. .+++|+|+||+|||++.+ +.++|+|||++..+.
T Consensus 117 ~~lH~~~~ivH~dlkp~Nili~~~--~~~kL~Dfg~~~~~~ 155 (333)
T cd06650 117 TYLREKHKIMHRDVKPSNILVNSR--GEIKLCDFGVSGQLI 155 (333)
T ss_pred HHHHhcCCEEecCCChhhEEEcCC--CCEEEeeCCcchhhh
Confidence 67785 589999999999999865 889999999986653
|
Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downst |
| >cd05619 STKc_nPKC_theta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta | Back alignment and domain information |
|---|
Probab=99.19 E-value=9.8e-11 Score=131.64 Aligned_cols=76 Identities=16% Similarity=0.229 Sum_probs=57.3
Q ss_pred cCCceEEeeccCCCCCCChHHHHhcCCCHHHHHHHHHHHH--HHHHHhcCccccCCCCCCeEEccCCCCceEEEeccccc
Q 002031 239 SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTK 316 (977)
Q Consensus 239 ~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~ 316 (977)
....+|||||++|.+|.+... .....+...+...+.+++ +..+|..|++|+|+||.|||++.+ +.++|+|||++.
T Consensus 68 ~~~~~lv~ey~~~g~L~~~l~-~~~~~~~~~~~~~~~qi~~al~~LH~~~ivHrdikp~Nil~~~~--~~~kl~Dfg~~~ 144 (316)
T cd05619 68 KENLFFVMEYLNGGDLMFHIQ-SCHKFDLPRATFYAAEIICGLQFLHSKGIVYRDLKLDNILLDTD--GHIKIADFGMCK 144 (316)
T ss_pred CCEEEEEEeCCCCCcHHHHHH-HcCCCCHHHHHHHHHHHHHHHHHHHhCCeEeCCCCHHHEEECCC--CCEEEccCCcce
Confidence 345679999999999876532 122344444444444433 788999999999999999999865 889999999986
Q ss_pred c
Q 002031 317 K 317 (977)
Q Consensus 317 ~ 317 (977)
.
T Consensus 145 ~ 145 (316)
T cd05619 145 E 145 (316)
T ss_pred E
Confidence 5
|
Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in |
| >cd05113 PTKc_Btk_Bmx Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome | Back alignment and domain information |
|---|
Probab=99.19 E-value=7.1e-11 Score=128.26 Aligned_cols=136 Identities=18% Similarity=0.181 Sum_probs=94.0
Q ss_pred cccccccccEEEEEEecCCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCcHHHHH
Q 002031 124 TPLATASIAQVHRATLVDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEAE 203 (977)
Q Consensus 124 ~piasaSigqV~~A~l~~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea~ 203 (977)
+.||+|++|.||.|+.+++..||||..+.+... +-+|.+|..
T Consensus 10 ~~lg~G~~~~vy~~~~~~~~~~aik~~~~~~~~--------------------------------------~~~~~~e~~ 51 (256)
T cd05113 10 KELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMS--------------------------------------EDEFIEEAK 51 (256)
T ss_pred eEecCcccceEEEEEecCCCcEEEEEcCCCccc--------------------------------------HHHHHHHHH
Confidence 469999999999999877778999976543110 002344555
Q ss_pred HHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeee----cCCceEEeeccCCCCCCChHHHHhcCCCHHHHHHHHHHHH-
Q 002031 204 NTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ----SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY- 278 (977)
Q Consensus 204 n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~----~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~- 278 (977)
.+.++.+ ..|++++. ....++||||++|.+|.+........++...+...+.++.
T Consensus 52 ~l~~l~h--------------------~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~i~~~~~~~~~~~~~~~~~~i~~ 111 (256)
T cd05113 52 VMMKLSH--------------------EKLVQLYGVCTKQRPIYIVTEYMSNGCLLNYLREHGKRFQPSQLLEMCKDVCE 111 (256)
T ss_pred HHhcCCC--------------------CCeeeEEEEEccCCCcEEEEEcCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHH
Confidence 4444321 12333332 3446899999999988876432222455555555555544
Q ss_pred -HHHHHhcCccccCCCCCCeEEccCCCCceEEEecccccccC
Q 002031 279 -AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 319 (977)
Q Consensus 279 -l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~ 319 (977)
+..+|..|++|+|+||+||+++.+ ++++|+|||++..+.
T Consensus 112 ~l~~lH~~~i~H~dl~p~nili~~~--~~~kl~d~g~~~~~~ 151 (256)
T cd05113 112 GMAYLESKQFIHRDLAARNCLVDDQ--GCVKVSDFGLSRYVL 151 (256)
T ss_pred HHHHHHhCCeeccccCcceEEEcCC--CCEEECCCccceecC
Confidence 678899999999999999999855 899999999987653
|
Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds |
| >cd07876 STKc_JNK2 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2 | Back alignment and domain information |
|---|
Probab=99.18 E-value=1.1e-10 Score=133.45 Aligned_cols=137 Identities=18% Similarity=0.242 Sum_probs=86.7
Q ss_pred cccccccccEEEEEEec-CCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCcHHHH
Q 002031 124 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (977)
Q Consensus 124 ~piasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea 202 (977)
+.||+|++|.||+|+.+ +|+.||||+.......... ...+.+|.
T Consensus 27 ~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~-----------------------------------~~~~~~E~ 71 (359)
T cd07876 27 KPIGSGAQGIVCAAFDTVLGINVAVKKLSRPFQNQTH-----------------------------------AKRAYREL 71 (359)
T ss_pred EEeecCCCEEEEEEEEcCCCceeEEEEecccccchhH-----------------------------------HHHHHHHH
Confidence 68999999999999974 7999999987533211000 00122333
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeee-------cCCceEEeeccCCCCCCChHHHHhcCCCHHHHHHHHH
Q 002031 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-------SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEIT 275 (977)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-------~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~ 275 (977)
..+..+.+ ...+.+..++. ....++||||++|... +. + ...++...+...+.
T Consensus 72 ~~l~~l~h-----------------~niv~~~~~~~~~~~~~~~~~~~lv~e~~~~~l~-~~--~-~~~~~~~~~~~~~~ 130 (359)
T cd07876 72 VLLKCVNH-----------------KNIISLLNVFTPQKSLEEFQDVYLVMELMDANLC-QV--I-HMELDHERMSYLLY 130 (359)
T ss_pred HHHHhCCC-----------------CCEeeeeeeeccCCCccccceeEEEEeCCCcCHH-HH--H-hccCCHHHHHHHHH
Confidence 33333321 11122222221 1235899999987422 21 1 22345555544444
Q ss_pred HHH--HHHHHhcCccccCCCCCCeEEccCCCCceEEEeccccccc
Q 002031 276 RAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKL 318 (977)
Q Consensus 276 ~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l 318 (977)
+++ +..+|..|++|||+||.|||++.+ +.++|+|||++...
T Consensus 131 qi~~~L~~LH~~~ivHrDlkp~NIl~~~~--~~~kl~Dfg~a~~~ 173 (359)
T cd07876 131 QMLCGIKHLHSAGIIHRDLKPSNIVVKSD--CTLKILDFGLARTA 173 (359)
T ss_pred HHHHHHHHHHhCCcccCCCCHHHEEECCC--CCEEEecCCCcccc
Confidence 444 788999999999999999999865 89999999998654
|
Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 2 (JNK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn |
| >cd05122 PKc_STE Catalytic domain of STE family Protein Kinases | Back alignment and domain information |
|---|
Probab=99.18 E-value=9.5e-11 Score=125.59 Aligned_cols=139 Identities=19% Similarity=0.253 Sum_probs=98.1
Q ss_pred cccccccccEEEEEEec-CCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCcHHHH
Q 002031 124 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (977)
Q Consensus 124 ~piasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea 202 (977)
++||+|++|.||+++.+ +|+.|++|+.+....+.. -++.+|.
T Consensus 6 ~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~-------------------------------------~~~~~e~ 48 (253)
T cd05122 6 EKIGKGGFGEVYKARHKRTGKEVAIKVIKLESKEKK-------------------------------------EKIINEI 48 (253)
T ss_pred eeeccCCceEEEEEEECCCCcEEEEEEecccchhHH-------------------------------------HHHHHHH
Confidence 67999999999999985 799999999876433100 0123344
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceee---e-cCCceEEeeccCCCCCCChHHHHhcCCCHHHHHHHHHHHH
Q 002031 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVI---Q-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY 278 (977)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~---~-~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~ 278 (977)
..+.++.+ -.++.++ . ....+++|||++|.+|.++.......++...+...+.+++
T Consensus 49 ~~l~~l~~--------------------~~i~~~~~~~~~~~~~~l~~e~~~~~~L~~~~~~~~~~~~~~~~~~i~~~i~ 108 (253)
T cd05122 49 QILKKCKH--------------------PNIVKYYGSYLKKDELWIVMEFCSGGSLKDLLKSTNQTLTESQIAYVCKELL 108 (253)
T ss_pred HHHHhCCC--------------------CCEeEEEEEEecCCeEEEEEecCCCCcHHHHHhhcCCCCCHHHHHHHHHHHH
Confidence 43333321 1222222 2 4567899999999999877443223456666665555544
Q ss_pred --HHHHHhcCccccCCCCCCeEEccCCCCceEEEecccccccCHH
Q 002031 279 --AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSSS 321 (977)
Q Consensus 279 --l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~~ 321 (977)
+..+|..|++|+|++|.||+++++ +.++|+|||.+..+...
T Consensus 109 ~~l~~lh~~~i~h~dl~p~ni~i~~~--~~~~l~d~~~~~~~~~~ 151 (253)
T cd05122 109 KGLEYLHSNGIIHRDIKAANILLTSD--GEVKLIDFGLSAQLSDT 151 (253)
T ss_pred HHHHHhhcCCEecCCCCHHHEEEccC--CeEEEeecccccccccc
Confidence 788999999999999999999865 89999999999887654
|
Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core |
| >cd05633 STKc_GRK3 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 3 | Back alignment and domain information |
|---|
Probab=99.18 E-value=1.6e-10 Score=127.37 Aligned_cols=78 Identities=19% Similarity=0.195 Sum_probs=59.3
Q ss_pred cCCceEEeeccCCCCCCChHHHHhcCCCHHHHHHHHHHHH--HHHHHhcCccccCCCCCCeEEccCCCCceEEEeccccc
Q 002031 239 SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTK 316 (977)
Q Consensus 239 ~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~ 316 (977)
....++||||++|.+|.+... ....+....+...+.++. +..+|..|++|+|+||+||+++.+ +.++|+|||++.
T Consensus 69 ~~~~~lv~e~~~~~~L~~~i~-~~~~l~~~~~~~i~~qi~~al~~lH~~~ivH~dikp~Nil~~~~--~~~~l~dfg~~~ 145 (279)
T cd05633 69 PDKLCFILDLMNGGDLHYHLS-QHGVFSEKEMRFYATEIILGLEHMHNRFVVYRDLKPANILLDEH--GHVRISDLGLAC 145 (279)
T ss_pred CCeEEEEEecCCCCCHHHHHH-hcCCCCHHHHHHHHHHHHHHHHHHHHCCcCCCCCCHHHEEECCC--CCEEEccCCcce
Confidence 345689999999999976533 222345555555444443 788999999999999999999865 899999999987
Q ss_pred ccC
Q 002031 317 KLS 319 (977)
Q Consensus 317 ~l~ 319 (977)
.+.
T Consensus 146 ~~~ 148 (279)
T cd05633 146 DFS 148 (279)
T ss_pred ecc
Confidence 654
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK3 (also known as beta-adrenergic receptor kinase 2) is wi |
| >cd06646 STKc_MAP4K5 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5 | Back alignment and domain information |
|---|
Probab=99.18 E-value=9.5e-11 Score=127.78 Aligned_cols=139 Identities=14% Similarity=0.117 Sum_probs=92.7
Q ss_pred cccccccccEEEEEEe-cCCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCcHHHH
Q 002031 124 TPLATASIAQVHRATL-VDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (977)
Q Consensus 124 ~piasaSigqV~~A~l-~~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea 202 (977)
+.||+|++|.||+|+. .+|+.||||+.+....... . .+.+|+
T Consensus 15 ~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~~~~~~----~---------------------------------~~~~e~ 57 (267)
T cd06646 15 QRVGSGTYGDVYKARNLHTGELAAVKIIKLEPGDDF----S---------------------------------LIQQEI 57 (267)
T ss_pred heeecCCCeEEEEEEECCCCeEEEEEEEecCccchH----H---------------------------------HHHHHH
Confidence 6789999999999997 5789999998864321110 0 123344
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeee-cCCceEEeeccCCCCCCChHHHHhcCCCHHHHHHHHHHHH--H
Q 002031 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--A 279 (977)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~--l 279 (977)
..+.++.+ ...+.+...+. ....++||||++|.+|.++... ....+...+.....++. +
T Consensus 58 ~~l~~~~h-----------------~~ii~~~~~~~~~~~~~iv~e~~~~~~L~~~~~~-~~~~~~~~~~~~~~qi~~~l 119 (267)
T cd06646 58 FMVKECKH-----------------CNIVAYFGSYLSREKLWICMEYCGGGSLQDIYHV-TGPLSELQIAYVCRETLQGL 119 (267)
T ss_pred HHHHhcCC-----------------CCeeeeeEEEEeCCEEEEEEeCCCCCcHHHHHHh-cCCCCHHHHHHHHHHHHHHH
Confidence 44433321 01112222222 4556899999999999876432 22344444444444433 6
Q ss_pred HHHHhcCccccCCCCCCeEEccCCCCceEEEecccccccC
Q 002031 280 HQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 319 (977)
Q Consensus 280 ~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~ 319 (977)
..+|..|++|+|++|+||+++.+ +.++|+|||++..+.
T Consensus 120 ~~lH~~~i~H~dl~p~nill~~~--~~~~l~dfg~~~~~~ 157 (267)
T cd06646 120 AYLHSKGKMHRDIKGANILLTDN--GDVKLADFGVAAKIT 157 (267)
T ss_pred HHHHHCCccccCCCHHHEEECCC--CCEEECcCccceeec
Confidence 78899999999999999999855 889999999998764
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 5 (MAPKKKK5 or MAP4K5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated |
| >KOG0588 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=99.18 E-value=4.3e-11 Score=137.48 Aligned_cols=134 Identities=16% Similarity=0.180 Sum_probs=93.0
Q ss_pred cccccccccEEEEEEe-cCCCEEEEEEecCCh------hhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhccccc
Q 002031 124 TPLATASIAQVHRATL-VDGRQVVVKVQHQGI------KTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKEL 196 (977)
Q Consensus 124 ~piasaSigqV~~A~l-~~G~~VAVKv~~p~i------~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~El 196 (977)
+-+|.||-|.|..|+. .+|+.+||||..... ...|..++.
T Consensus 18 kTLG~Gstg~vrlakh~~TGqlaaiKii~k~~~~s~s~~~~IerEIv--------------------------------- 64 (786)
T KOG0588|consen 18 KTLGKGSTGCVRLAKHAETGQLAAIKIIPKRSELSSSQPAGIEREIV--------------------------------- 64 (786)
T ss_pred ccccCCCCceehhhhcccccceeEEEeeccccccccccccchhhhhH---------------------------------
Confidence 5689999999999997 589999999974321 112222222
Q ss_pred CcHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeee-cCCceEEeeccCCCCCCChHHHHhcCCCHHHHHHHHH
Q 002031 197 DFNSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEIT 275 (977)
Q Consensus 197 d~~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~ 275 (977)
-++-+.| ...+..-.|+. ..+.|||.||++|+.|-++.. +..++...+.+.-+.
T Consensus 65 -------iMkLi~H-----------------pnVl~LydVwe~~~~lylvlEyv~gGELFdylv-~kG~l~e~eaa~ff~ 119 (786)
T KOG0588|consen 65 -------IMKLIEH-----------------PNVLRLYDVWENKQHLYLVLEYVPGGELFDYLV-RKGPLPEREAAHFFR 119 (786)
T ss_pred -------HHHHhcC-----------------CCeeeeeeeeccCceEEEEEEecCCchhHHHHH-hhCCCCCHHHHHHHH
Confidence 2222211 12233334444 566799999999999988753 334455555555555
Q ss_pred HHH--HHHHHhcCccccCCCCCCeEEccCCCCceEEEecccccc
Q 002031 276 RAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKK 317 (977)
Q Consensus 276 ~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~ 317 (977)
+++ +...|..+|+|||+||.|+|++.. ++|+|.||||+..
T Consensus 120 QIi~gv~yCH~~~icHRDLKpENlLLd~~--~nIKIADFGMAsL 161 (786)
T KOG0588|consen 120 QILDGVSYCHAFNICHRDLKPENLLLDVK--NNIKIADFGMASL 161 (786)
T ss_pred HHHHHHHHHhhhcceeccCCchhhhhhcc--cCEeeeccceeec
Confidence 544 667789999999999999999976 6699999999863
|
|
| >cd05041 PTKc_Fes_like Catalytic domain of Fes-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=99.18 E-value=1.4e-10 Score=125.09 Aligned_cols=140 Identities=16% Similarity=0.191 Sum_probs=93.7
Q ss_pred cccccccccEEEEEEecCCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCcHHHHH
Q 002031 124 TPLATASIAQVHRATLVDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEAE 203 (977)
Q Consensus 124 ~piasaSigqV~~A~l~~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea~ 203 (977)
+.||.|++|.||+|...+|+.|++|+.+....... ...+.+|.+
T Consensus 1 ~~lg~g~~g~v~~~~~~~~~~v~~K~~~~~~~~~~------------------------------------~~~~~~e~~ 44 (251)
T cd05041 1 EKIGKGNFGDVYKGVLKGNTEVAVKTCRSTLPPDL------------------------------------KRKFLQEAE 44 (251)
T ss_pred CccccCCCceEEEEEEeCCCcEEEEeccccCCHHH------------------------------------HHHHHHHHH
Confidence 36899999999999987799999997654322100 002334444
Q ss_pred HHHHHHHHhCCCCCCCCCCCCCCCCCCe-Eeceeee-cCCceEEeeccCCCCCCChHHHHhcCCCHHHHHHHHHHHH--H
Q 002031 204 NTRIVSANLGCKNKHEDSNKKPAYEVDV-LIPEVIQ-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--A 279 (977)
Q Consensus 204 n~~~~~~~~~~~~~~~~~~~~~~~~~~v-~vP~v~~-~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~--l 279 (977)
.+.++.+ +.+ .+-..+. ....++||||++|.+|.++........+...+...+.++. +
T Consensus 45 ~l~~l~~------------------~~i~~~~~~~~~~~~~~~v~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~l 106 (251)
T cd05041 45 ILKQYDH------------------PNIVKLIGVCVQKQPIYIVMELVPGGSLLTFLRKKKNRLTVKKLLQMSLDAAAGM 106 (251)
T ss_pred HHHhCCC------------------CCeEEEEEEEecCCCeEEEEEcCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHH
Confidence 4333321 111 1112222 5667999999999998876432222345555555444443 6
Q ss_pred HHHHhcCccccCCCCCCeEEccCCCCceEEEecccccccC
Q 002031 280 HQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 319 (977)
Q Consensus 280 ~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~ 319 (977)
..+|..|++|+|++|.||+++.+ ++++|+|||++....
T Consensus 107 ~~lH~~~i~h~di~p~nili~~~--~~~~l~d~g~~~~~~ 144 (251)
T cd05041 107 EYLESKNCIHRDLAARNCLVGEN--NVLKISDFGMSREEE 144 (251)
T ss_pred HHHHhCCEehhhcCcceEEEcCC--CcEEEeecccccccc
Confidence 78999999999999999999865 899999999987654
|
Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr k |
| >cd05109 PTKc_HER2 Catalytic domain of the Protein Tyrosine Kinase, HER2 | Back alignment and domain information |
|---|
Probab=99.18 E-value=1.3e-10 Score=127.61 Aligned_cols=80 Identities=19% Similarity=0.150 Sum_probs=61.7
Q ss_pred cCCceEEeeccCCCCCCChHHHHhcCCCHHHHHHHHHHHH--HHHHHhcCccccCCCCCCeEEccCCCCceEEEeccccc
Q 002031 239 SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTK 316 (977)
Q Consensus 239 ~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~ 316 (977)
....+++|||+++++|.+........+....+...+.++. +..+|..|++|+|+||+||+++.+ +.++|+|||++.
T Consensus 80 ~~~~~l~~~~~~~g~l~~~l~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~iiH~dlkp~Nil~~~~--~~~kL~dfG~~~ 157 (279)
T cd05109 80 TSTVQLVTQLMPYGCLLDYVRENKDRIGSQDLLNWCVQIAKGMSYLEEVRLVHRDLAARNVLVKSP--NHVKITDFGLAR 157 (279)
T ss_pred CCCcEEEEEcCCCCCHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHCCeeccccccceEEEcCC--CcEEECCCCcee
Confidence 4556899999999998776432222355556666555555 788999999999999999999855 789999999988
Q ss_pred ccCH
Q 002031 317 KLSS 320 (977)
Q Consensus 317 ~l~~ 320 (977)
.++.
T Consensus 158 ~~~~ 161 (279)
T cd05109 158 LLDI 161 (279)
T ss_pred eccc
Confidence 7653
|
Protein Tyrosine Kinase (PTK) family; HER2 (ErbB2, HER2/neu); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER2 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve |
| >cd06641 STKc_MST3 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3 | Back alignment and domain information |
|---|
Probab=99.18 E-value=1.4e-10 Score=127.41 Aligned_cols=148 Identities=14% Similarity=0.148 Sum_probs=99.0
Q ss_pred hhhcccccCccccccccccEEEEEEe-cCCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhc
Q 002031 114 MGGMFMDFVETPLATASIAQVHRATL-VDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEA 192 (977)
Q Consensus 114 ~~~~f~~~d~~piasaSigqV~~A~l-~~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l 192 (977)
++++|..+ +.||+|++|.||+|.. .+|+.||||+.........
T Consensus 2 ~~~~~~~~--~~ig~G~~~~vy~~~~~~~~~~~aiK~~~~~~~~~~---------------------------------- 45 (277)
T cd06641 2 PEELFTKL--EKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDE---------------------------------- 45 (277)
T ss_pred HHHhhhhh--eeEeecCCeEEEEEEECCCCcEEEEEEeccccchHH----------------------------------
Confidence 35566554 4599999999999986 4789999997642211000
Q ss_pred ccccCcHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeee-cCCceEEeeccCCCCCCChHHHHhcCCCHHHHH
Q 002031 193 PKELDFNSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVV 271 (977)
Q Consensus 193 ~~Eld~~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~ 271 (977)
.-++.+|...+.++.+ ..-+.+...+. ....++||||++|.+|.++. .....+...+.
T Consensus 46 --~~~~~~e~~~l~~l~h-----------------~~iv~~~~~~~~~~~~~lv~e~~~~~~l~~~i--~~~~~~~~~~~ 104 (277)
T cd06641 46 --IEDIQQEITVLSQCDS-----------------PYVTKYYGSYLKDTKLWIIMEYLGGGSALDLL--EPGPLDETQIA 104 (277)
T ss_pred --HHHHHHHHHHHHhcCC-----------------CCEeEEEEEEEeCCeEEEEEEeCCCCcHHHHH--hcCCCCHHHHH
Confidence 0123445444444321 11122222222 46679999999999887663 33445566555
Q ss_pred HHHHHHH--HHHHHhcCccccCCCCCCeEEccCCCCceEEEecccccccCH
Q 002031 272 EEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 320 (977)
Q Consensus 272 ~~l~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 320 (977)
..+.+++ +..+|..|++|+|++|+||+++.+ +.++|+|||++..+..
T Consensus 105 ~~~~~l~~~l~~lh~~~i~h~dl~p~Ni~i~~~--~~~~l~dfg~~~~~~~ 153 (277)
T cd06641 105 TILREILKGLDYLHSEKKIHRDIKAANVLLSEH--GEVKLADFGVAGQLTD 153 (277)
T ss_pred HHHHHHHHHHHHHccCCeecCCCCHHhEEECCC--CCEEEeecccceeccc
Confidence 5555544 678899999999999999999855 8899999999877654
|
Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and int |
| >cd05610 STKc_MASTL Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase | Back alignment and domain information |
|---|
Probab=99.18 E-value=8.7e-11 Score=144.99 Aligned_cols=142 Identities=18% Similarity=0.240 Sum_probs=91.7
Q ss_pred cccccccccEEEEEEec-CCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCcHHHH
Q 002031 124 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (977)
Q Consensus 124 ~piasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea 202 (977)
+.||.|++|.||+|+.. +|+.||||+.+..... +-. ... .+..|.
T Consensus 10 ~~LG~G~fg~Vy~a~~~~~~~~vAiKvi~~~~~~----~~~------------------------~~~------~~~~E~ 55 (669)
T cd05610 10 KPISRGAFGKVYLGRKKNNSKLYAVKVVKKADMI----NKN------------------------MVH------QVQAER 55 (669)
T ss_pred EEEecCCCeEEEEEEECCCCcEEEEEEEehhhcc----CHH------------------------HHH------HHHHHH
Confidence 67999999999999985 7999999997642100 000 000 122333
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeee-cCCceEEeeccCCCCCCChHHHHhcCCCHHHHHHHHHHHH--H
Q 002031 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--A 279 (977)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~--l 279 (977)
..+..+++ ...+.+-..+. ....+|||||++|.+|.++.... ..++...+...+.+++ +
T Consensus 56 ~~l~~l~h-----------------p~Iv~~~~~~~~~~~~~lVmEy~~g~~L~~li~~~-~~l~~~~~~~i~~qil~aL 117 (669)
T cd05610 56 DALALSKS-----------------PFIVHLYYSLQSANNVYLVMEYLIGGDVKSLLHIY-GYFDEEMAVKYISEVALAL 117 (669)
T ss_pred HHHHhcCC-----------------CCcCeEEEEEEECCEEEEEEeCCCCCCHHHHHHhc-CCCCHHHHHHHHHHHHHHH
Confidence 33333221 00111112222 45678999999999998764321 2234444444444433 7
Q ss_pred HHHHhcCccccCCCCCCeEEccCCCCceEEEecccccccC
Q 002031 280 HQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 319 (977)
Q Consensus 280 ~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~ 319 (977)
..+|..||+|+||||.|||++.+ +.++|+|||+++...
T Consensus 118 ~yLH~~gIiHrDLKP~NILl~~~--g~vkL~DFGls~~~~ 155 (669)
T cd05610 118 DYLHRHGIIHRDLKPDNMLISNE--GHIKLTDFGLSKVTL 155 (669)
T ss_pred HHHHhCCEEeCCccHHHEEEcCC--CCEEEEeCCCCcccc
Confidence 88999999999999999999865 899999999988654
|
Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ1481 |
| >KOG0197 consensus Tyrosine kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.17 E-value=5e-11 Score=135.11 Aligned_cols=138 Identities=17% Similarity=0.206 Sum_probs=107.1
Q ss_pred cccccccccEEEEEEecCCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCcHHHHH
Q 002031 124 TPLATASIAQVHRATLVDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEAE 203 (977)
Q Consensus 124 ~piasaSigqV~~A~l~~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea~ 203 (977)
+-||+|-||.||.|+.....+||||.++++-. .+-+|.+||.
T Consensus 212 ~~LG~G~FG~V~~g~~~~~~~vavk~ik~~~m--------------------------------------~~~~f~~Ea~ 253 (468)
T KOG0197|consen 212 RELGSGQFGEVWLGKWNGSTKVAVKTIKEGSM--------------------------------------SPEAFLREAQ 253 (468)
T ss_pred HHhcCCccceEEEEEEcCCCcccceEEecccc--------------------------------------ChhHHHHHHH
Confidence 56899999999999996666999999987621 2236778999
Q ss_pred HHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeee-cC---CceEEeeccCCCCCCChHHH-HhcCCCHHHHHHHHHHHH
Q 002031 204 NTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SS---ETVLILEFMDGIRLNDCESL-EAFGVNKQKVVEEITRAY 278 (977)
Q Consensus 204 n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~---~~vLVmE~i~G~~L~~~~~~-~~~~~~~~~l~~~l~~~~ 278 (977)
-+.+++|. .+-+.+. |+ .-+|||||++-++|.++..- ....++..+++....++.
T Consensus 254 iMk~L~H~--------------------~lV~l~gV~~~~~piyIVtE~m~~GsLl~yLr~~~~~~l~~~~Ll~~a~qIa 313 (468)
T KOG0197|consen 254 IMKKLRHE--------------------KLVKLYGVCTKQEPIYIVTEYMPKGSLLDYLRTREGGLLNLPQLLDFAAQIA 313 (468)
T ss_pred HHHhCccc--------------------CeEEEEEEEecCCceEEEEEecccCcHHHHhhhcCCCccchHHHHHHHHHHH
Confidence 99888751 2333333 32 25899999999999888553 234466777777777776
Q ss_pred --HHHHHhcCccccCCCCCCeEEccCCCCceEEEecccccccCHH
Q 002031 279 --AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSSS 321 (977)
Q Consensus 279 --l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~~ 321 (977)
+..|-..++|||||-..||||+++ ..+++.|||+++.+.++
T Consensus 314 eGM~YLes~~~IHRDLAARNiLV~~~--~~vKIsDFGLAr~~~d~ 356 (468)
T KOG0197|consen 314 EGMAYLESKNYIHRDLAARNILVDED--LVVKISDFGLARLIGDD 356 (468)
T ss_pred HHHHHHHhCCccchhhhhhheeeccC--ceEEEcccccccccCCC
Confidence 778888999999999999999966 88999999999965543
|
|
| >KOG0694 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.17 E-value=5.2e-11 Score=137.88 Aligned_cols=138 Identities=15% Similarity=0.179 Sum_probs=92.7
Q ss_pred cccccccccEEEEEEec-CCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCcHHHH
Q 002031 124 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (977)
Q Consensus 124 ~piasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea 202 (977)
..+|.||||.|+.|.++ +++..|||+++.+.--+ ..|++. .+.|.
T Consensus 374 ~vLGkGsFGkV~lae~k~~~e~yAIK~LKK~~Il~-~d~Ve~---------------------------------~~~Ek 419 (694)
T KOG0694|consen 374 AVLGRGSFGKVLLAELKGTNEYYAIKVLKKGDILQ-RDEVES---------------------------------LMCEK 419 (694)
T ss_pred EEeccCcCceEEEEEEcCCCcEEEEEEeeccceec-cccHHH---------------------------------HHHHH
Confidence 67999999999999986 78899999998764210 111111 12233
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeee----cCCceEEeeccCCCCCCChHHHHhcCCCHHHHHHHHHH--
Q 002031 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ----SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITR-- 276 (977)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~----~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~-- 276 (977)
+-++...+ ...+-..+. .++-+.||||+.|+.+..+.. ...++..++.-..++
T Consensus 420 rI~~la~~-------------------HPFL~~L~~~fQT~~~l~fvmey~~Ggdm~~~~~--~~~F~e~rarfyaAev~ 478 (694)
T KOG0694|consen 420 RIFELANR-------------------HPFLVNLFSCFQTKEHLFFVMEYVAGGDLMHHIH--TDVFSEPRARFYAAEVV 478 (694)
T ss_pred HHHHHhcc-------------------CCeEeecccccccCCeEEEEEEecCCCcEEEEEe--cccccHHHHHHHHHHHH
Confidence 33222210 112223332 345578999999999766532 233444443333333
Q ss_pred HHHHHHHhcCccccCCCCCCeEEccCCCCceEEEeccccccc
Q 002031 277 AYAHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKL 318 (977)
Q Consensus 277 ~~l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l 318 (977)
..++.+|++||++||+|-.|||++.+ |.++|+||||++.-
T Consensus 479 l~L~fLH~~~IIYRDlKLdNiLLD~e--Gh~kiADFGlcKe~ 518 (694)
T KOG0694|consen 479 LGLQFLHENGIIYRDLKLDNLLLDTE--GHVKIADFGLCKEG 518 (694)
T ss_pred HHHHHHHhcCceeeecchhheEEccc--CcEEeccccccccc
Confidence 34889999999999999999999966 99999999999875
|
|
| >cd06642 STKc_STK25-YSK1 Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1 | Back alignment and domain information |
|---|
Probab=99.17 E-value=6.5e-11 Score=129.97 Aligned_cols=144 Identities=15% Similarity=0.188 Sum_probs=94.0
Q ss_pred hhcccccCccccccccccEEEEEEec-CCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcc
Q 002031 115 GGMFMDFVETPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAP 193 (977)
Q Consensus 115 ~~~f~~~d~~piasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~ 193 (977)
.+.|..+ +.||+|++|.||+|.+. +|+.||||+...........
T Consensus 3 ~~~y~~~--~~l~~g~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~--------------------------------- 47 (277)
T cd06642 3 EELFTKL--ERIGKGSFGEVYKGIDNRTKEVVAIKIIDLEEAEDEIE--------------------------------- 47 (277)
T ss_pred HHHHHHH--HHhcCCCCeeEEEEEEcCCCeEEEEEEeccccchHHHH---------------------------------
Confidence 4455544 46999999999999874 68899999875332111000
Q ss_pred cccCcHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceee---e-cCCceEEeeccCCCCCCChHHHHhcCCCHHH
Q 002031 194 KELDFNSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVI---Q-SSETVLILEFMDGIRLNDCESLEAFGVNKQK 269 (977)
Q Consensus 194 ~Eld~~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~---~-~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~ 269 (977)
++.+|+..+.++.+ -.|++++ . ....++||||++|.+|.+.. .........
T Consensus 48 ---~~~~e~~~l~~l~h--------------------~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~--~~~~~~~~~ 102 (277)
T cd06642 48 ---DIQQEITVLSQCDS--------------------PYITRYYGSYLKGTKLWIIMEYLGGGSALDLL--KPGPLEETY 102 (277)
T ss_pred ---HHHHHHHHHHcCCC--------------------CccHhhhcccccCCceEEEEEccCCCcHHHHh--hcCCCCHHH
Confidence 12334443333321 1111111 1 45568999999999887653 333344444
Q ss_pred HHHHHHHHH--HHHHHhcCccccCCCCCCeEEccCCCCceEEEecccccccCH
Q 002031 270 VVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 320 (977)
Q Consensus 270 l~~~l~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 320 (977)
+...+.++. +..+|..|++|+|+||+||+++.+ +.++|+|||++..+..
T Consensus 103 ~~~~~~~i~~~l~~lH~~~ivH~dl~p~ni~i~~~--~~~~l~dfg~~~~~~~ 153 (277)
T cd06642 103 IATILREILKGLDYLHSERKIHRDIKAANVLLSEQ--GDVKLADFGVAGQLTD 153 (277)
T ss_pred HHHHHHHHHHHHHHHhcCCeeccCCChheEEEeCC--CCEEEccccccccccC
Confidence 444444433 677899999999999999999865 8899999999987764
|
Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25 |
| >cd06611 STKc_SLK_like Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.17 E-value=1.2e-10 Score=127.96 Aligned_cols=140 Identities=19% Similarity=0.179 Sum_probs=95.5
Q ss_pred cccccccccEEEEEEec-CCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCcHHHH
Q 002031 124 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (977)
Q Consensus 124 ~piasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea 202 (977)
+.||.|++|+||+|+.+ +++.||+|+.+....... -+|..|+
T Consensus 11 ~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~-------------------------------------~~~~~e~ 53 (280)
T cd06611 11 GELGDGAFGKVYKAQHKETGLFAAAKIIQIESEEEL-------------------------------------EDFMVEI 53 (280)
T ss_pred HHhcCCCCceEEEEEEcCCCcEEEEEEEeeCCHHHH-------------------------------------HHHHHHH
Confidence 46899999999999974 789999998764322111 0234455
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeee-cCCceEEeeccCCCCCCChHHHHhcCCCHHHHHHHHHHHH--H
Q 002031 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--A 279 (977)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~--l 279 (977)
..+.++.+ ..-+.+...+. ....++||||++|.+|.++.......++...+...+.++. +
T Consensus 54 ~~l~~l~h-----------------~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~l~~~~~~~~~~ql~~~l 116 (280)
T cd06611 54 DILSECKH-----------------PNIVGLYEAYFYENKLWILIEFCDGGALDSIMLELERGLTEPQIRYVCRQMLEAL 116 (280)
T ss_pred HHHHhCCC-----------------CceeEEEEEEecCCeEEEEeeccCCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHH
Confidence 54444421 11122222222 4556899999999999877443223455555555544443 6
Q ss_pred HHHHhcCccccCCCCCCeEEccCCCCceEEEecccccccC
Q 002031 280 HQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 319 (977)
Q Consensus 280 ~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~ 319 (977)
..+|..|++|+|++|.||+++.+ +.++|+|||.+....
T Consensus 117 ~~lh~~~i~h~dl~p~nili~~~--~~~~l~d~g~~~~~~ 154 (280)
T cd06611 117 NFLHSHKVIHRDLKAGNILLTLD--GDVKLADFGVSAKNK 154 (280)
T ss_pred HHHHHCCcccCCCChhhEEECCC--CCEEEccCccchhhc
Confidence 78899999999999999999865 899999999876653
|
Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated anti |
| >cd06640 STKc_MST4 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4 | Back alignment and domain information |
|---|
Probab=99.17 E-value=1.5e-10 Score=127.19 Aligned_cols=147 Identities=14% Similarity=0.152 Sum_probs=97.2
Q ss_pred hhcccccCccccccccccEEEEEEec-CCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcc
Q 002031 115 GGMFMDFVETPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAP 193 (977)
Q Consensus 115 ~~~f~~~d~~piasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~ 193 (977)
++.|..+ +.||+|++|+||+|+.+ +++.||||+........ .
T Consensus 3 ~~~y~~~--~~lg~g~~~~vy~~~~~~~~~~vaiK~~~~~~~~~---~-------------------------------- 45 (277)
T cd06640 3 EELFTKL--ERIGKGSFGEVFKGIDNRTQQVVAIKIIDLEEAED---E-------------------------------- 45 (277)
T ss_pred HHhhhhh--hhcccCCCeEEEEEEEccCCEEEEEEEEeccccHH---H--------------------------------
Confidence 3444443 56999999999999975 68999999865221100 0
Q ss_pred cccCcHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeee-cCCceEEeeccCCCCCCChHHHHhcCCCHHHHHH
Q 002031 194 KELDFNSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVE 272 (977)
Q Consensus 194 ~Eld~~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~ 272 (977)
..++.+|...+.++.+ ...+.+...+. ....++||||++|.+|.+.. .....+...+..
T Consensus 46 -~~~~~~e~~~l~~l~h-----------------~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~i--~~~~l~~~~~~~ 105 (277)
T cd06640 46 -IEDIQQEITVLSQCDS-----------------PYVTKYYGSYLKGTKLWIIMEYLGGGSALDLL--RAGPFDEFQIAT 105 (277)
T ss_pred -HHHHHHHHHHHHhCCC-----------------CCEeeEEEEEEECCEEEEEEecCCCCcHHHHH--hcCCCCHHHHHH
Confidence 0123344444433321 01122222222 46679999999999997763 333455555555
Q ss_pred HHHHHH--HHHHHhcCccccCCCCCCeEEccCCCCceEEEecccccccCH
Q 002031 273 EITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 320 (977)
Q Consensus 273 ~l~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 320 (977)
.+.+++ +..+|..|++|+|++|+||+++.+ ++++|+|||++..+..
T Consensus 106 ~~~~l~~~l~~lh~~~ivH~dl~p~Nil~~~~--~~~~l~dfg~~~~~~~ 153 (277)
T cd06640 106 MLKEILKGLDYLHSEKKIHRDIKAANVLLSEQ--GDVKLADFGVAGQLTD 153 (277)
T ss_pred HHHHHHHHHHHHHhCCccCcCCChhhEEEcCC--CCEEEcccccceeccC
Confidence 444443 678899999999999999999865 8899999999877654
|
Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by inter |
| >cd05570 STKc_PKC Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C | Back alignment and domain information |
|---|
Probab=99.17 E-value=7.8e-11 Score=132.50 Aligned_cols=76 Identities=14% Similarity=0.193 Sum_probs=57.7
Q ss_pred cCCceEEeeccCCCCCCChHHHHhcCCCHHHHHHHHHHHH--HHHHHhcCccccCCCCCCeEEccCCCCceEEEeccccc
Q 002031 239 SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTK 316 (977)
Q Consensus 239 ~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~ 316 (977)
....++||||++|.+|.+... ....++...+...+.+++ +..+|..|++|+|+||.||+++.+ +.++|+|||++.
T Consensus 68 ~~~~~lv~e~~~~~~L~~~~~-~~~~l~~~~~~~~~~qi~~~l~~LH~~~ivH~dlkp~Nill~~~--~~~kl~Dfg~~~ 144 (318)
T cd05570 68 KDRLFFVMEYVNGGDLMFHIQ-RSGRFDEPRARFYAAEIVLGLQFLHERGIIYRDLKLDNVLLDSE--GHIKIADFGMCK 144 (318)
T ss_pred CCEEEEEEcCCCCCCHHHHHH-HcCCCCHHHHHHHHHHHHHHHHHHHhCCeEccCCCHHHeEECCC--CcEEecccCCCe
Confidence 345689999999998876532 222455555554444443 778999999999999999999865 899999999876
Q ss_pred c
Q 002031 317 K 317 (977)
Q Consensus 317 ~ 317 (977)
.
T Consensus 145 ~ 145 (318)
T cd05570 145 E 145 (318)
T ss_pred e
Confidence 4
|
Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only re |
| >cd07862 STKc_CDK6 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6 | Back alignment and domain information |
|---|
Probab=99.17 E-value=7.3e-11 Score=130.42 Aligned_cols=77 Identities=22% Similarity=0.306 Sum_probs=56.1
Q ss_pred CCceEEeeccCCCCCCChHHHH-hcCCCHHHHHHHHHHHH--HHHHHhcCccccCCCCCCeEEccCCCCceEEEeccccc
Q 002031 240 SETVLILEFMDGIRLNDCESLE-AFGVNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTK 316 (977)
Q Consensus 240 ~~~vLVmE~i~G~~L~~~~~~~-~~~~~~~~l~~~l~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~ 316 (977)
...++||||++| +|.+..... ..+++...+...+.++. +..+|..|++|+|+||.|||++.+ +.++|+|||++.
T Consensus 82 ~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~lH~~~iiH~dlkp~Nil~~~~--~~~kl~Dfg~~~ 158 (290)
T cd07862 82 TKLTLVFEHVDQ-DLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHSHRVVHRDLKPQNILVTSS--GQIKLADFGLAR 158 (290)
T ss_pred CcEEEEEccCCC-CHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCHHHEEEcCC--CCEEEccccceE
Confidence 346899999986 555443211 12345555555444444 788999999999999999999865 899999999987
Q ss_pred ccC
Q 002031 317 KLS 319 (977)
Q Consensus 317 ~l~ 319 (977)
.++
T Consensus 159 ~~~ 161 (290)
T cd07862 159 IYS 161 (290)
T ss_pred ecc
Confidence 664
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytopla |
| >KOG0662 consensus Cyclin-dependent kinase CDK5 [Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.17 E-value=3.9e-11 Score=117.16 Aligned_cols=138 Identities=18% Similarity=0.226 Sum_probs=85.6
Q ss_pred cccccccccEEEEEEec-CCCEEEEEEecC-----ChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccC
Q 002031 124 TPLATASIAQVHRATLV-DGRQVVVKVQHQ-----GIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELD 197 (977)
Q Consensus 124 ~piasaSigqV~~A~l~-~G~~VAVKv~~p-----~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld 197 (977)
+.||.|.+|.|++|+.+ +++-||+|-.|- |++.... +|+.
T Consensus 8 ekigegtygtvfkarn~~t~eivalkrvrlddddegvpssal----------------------------------reic 53 (292)
T KOG0662|consen 8 EKIGEGTYGTVFKARNRETHEIVALKRVRLDDDDEGVPSSAL----------------------------------REIC 53 (292)
T ss_pred HhhcCCcceeeEecccCCccceEEEEEEeccCCCCCCcHHHH----------------------------------HHHH
Confidence 46899999999999975 689999997663 2222222 2333
Q ss_pred cHHHHH--HHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeeecCCceEEeeccCCCCCCChHHHHhcCCCHHHHHHHHH
Q 002031 198 FNSEAE--NTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQSSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEIT 275 (977)
Q Consensus 198 ~~~Ea~--n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~ 275 (977)
+.+|.+ |+.++.+.+. ...+..||.|||+- .|..+.......++.+.+-.-++
T Consensus 54 llkelkhknivrl~dvlh------------------------sdkkltlvfe~cdq-dlkkyfdslng~~d~~~~rsfml 108 (292)
T KOG0662|consen 54 LLKELKHKNIVRLHDVLH------------------------SDKKLTLVFEFCDQ-DLKKYFDSLNGDLDPEIVRSFML 108 (292)
T ss_pred HHHHhhhcceeehhhhhc------------------------cCceeEEeHHHhhH-HHHHHHHhcCCcCCHHHHHHHHH
Confidence 344433 3333332221 13344689999972 22222111122344443333333
Q ss_pred HHH--HHHHHhcCccccCCCCCCeEEccCCCCceEEEecccccccCHHH
Q 002031 276 RAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSSSM 322 (977)
Q Consensus 276 ~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~~~ 322 (977)
+.+ +...|.+++.|||+||.|++|+.+ |.++|.|||+++.+.-..
T Consensus 109 qllrgl~fchshnvlhrdlkpqnllin~n--gelkladfglarafgipv 155 (292)
T KOG0662|consen 109 QLLRGLGFCHSHNVLHRDLKPQNLLINRN--GELKLADFGLARAFGIPV 155 (292)
T ss_pred HHHhhhhhhhhhhhhhccCCcceEEeccC--CcEEecccchhhhcCCce
Confidence 333 444577999999999999999966 999999999988765433
|
|
| >cd07859 STKc_TDY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TDY Mitogen-Activated Protein Kinases from Plants | Back alignment and domain information |
|---|
Probab=99.17 E-value=8.7e-11 Score=132.81 Aligned_cols=139 Identities=17% Similarity=0.215 Sum_probs=89.4
Q ss_pred cccccccccEEEEEEec-CCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCcHHHH
Q 002031 124 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (977)
Q Consensus 124 ~piasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea 202 (977)
+.||.|++|.||+|+.+ +|+.||||+.+...... .....+.+|+
T Consensus 6 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~-----------------------------------~~~~~~~~E~ 50 (338)
T cd07859 6 EVIGKGSYGVVCSAIDTHTGEKVAIKKINDVFEHV-----------------------------------SDATRILREI 50 (338)
T ss_pred EEEeecCCeEEEEEEECCCCCEEEEEEechhhccc-----------------------------------hhHHHHHHHH
Confidence 56999999999999974 79999999765321100 0001234565
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeee------cCCceEEeeccCCCCCCChHHHHhcCCCHHHHHHHHHH
Q 002031 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ------SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITR 276 (977)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~------~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~ 276 (977)
+.+.++++ ...+.+-.++. ....++||||++| +|.+... ....++...+...+.+
T Consensus 51 ~~l~~l~h-----------------pniv~~~~~~~~~~~~~~~~~~lv~e~~~~-~L~~~l~-~~~~~~~~~~~~i~~q 111 (338)
T cd07859 51 KLLRLLRH-----------------PDIVEIKHIMLPPSRREFKDIYVVFELMES-DLHQVIK-ANDDLTPEHHQFFLYQ 111 (338)
T ss_pred HHHHhCCC-----------------CCEeeecceEeccCCCCCceEEEEEecCCC-CHHHHHH-hcccCCHHHHHHHHHH
Confidence 55555432 11122222221 1235899999965 5544422 1223455554444444
Q ss_pred HH--HHHHHhcCccccCCCCCCeEEccCCCCceEEEeccccccc
Q 002031 277 AY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKL 318 (977)
Q Consensus 277 ~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l 318 (977)
+. +..+|..|++|+|+||.|||++.+ +.++|+|||++...
T Consensus 112 i~~aL~~LH~~~ivH~dlkp~NIll~~~--~~~kL~Dfg~~~~~ 153 (338)
T cd07859 112 LLRALKYIHTANVFHRDLKPKNILANAD--CKLKICDFGLARVA 153 (338)
T ss_pred HHHHHHHHHHCCeecCCCCHHHeEECCC--CcEEEccCcccccc
Confidence 43 788999999999999999999865 89999999998754
|
Serine/Threonine Kinases (STKs), Plant TDY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TDY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. Oryza sativa contains at least 17 MAPKs. There are two subtypes of plant MAPKs based on the conserved phos |
| >smart00219 TyrKc Tyrosine kinase, catalytic domain | Back alignment and domain information |
|---|
Probab=99.17 E-value=1.1e-10 Score=126.02 Aligned_cols=140 Identities=19% Similarity=0.234 Sum_probs=95.7
Q ss_pred cccccccccEEEEEEecC-----CCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCc
Q 002031 124 TPLATASIAQVHRATLVD-----GRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDF 198 (977)
Q Consensus 124 ~piasaSigqV~~A~l~~-----G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~ 198 (977)
+.+|.|++|+||+|+..+ ++.||+|+.++...... +-++
T Consensus 5 ~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~~~~~------------------------------------~~~~ 48 (258)
T smart00219 5 KKLGEGAFGEVYKGTLKGLSGEKEVEVAVKTLKEDADEQQ------------------------------------IEEF 48 (258)
T ss_pred ceeccCCCcceEEEEecCCCCCCCceEEEEEccCCCChHH------------------------------------HHHH
Confidence 578999999999999753 48899999876532110 0023
Q ss_pred HHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeee----cCCceEEeeccCCCCCCChHHHHhcC-CCHHHHHHH
Q 002031 199 NSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ----SSETVLILEFMDGIRLNDCESLEAFG-VNKQKVVEE 273 (977)
Q Consensus 199 ~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~----~~~~vLVmE~i~G~~L~~~~~~~~~~-~~~~~l~~~ 273 (977)
..|.+.+.++.+ ..|.+++. ....+++|||++|.+|.+........ .+...+...
T Consensus 49 ~~e~~~l~~l~~--------------------~~i~~~~~~~~~~~~~~~i~e~~~~~~l~~~~~~~~~~~~~~~~~~~~ 108 (258)
T smart00219 49 LREARIMRKLDH--------------------PNIVKLLGVCTEEEPLMIVMEYMEGGDLLDYLRKNRPKELSLSDLLSF 108 (258)
T ss_pred HHHHHHHHhcCC--------------------CchheEEEEEcCCCeeEEEEeccCCCCHHHHHHhhhhccCCHHHHHHH
Confidence 334444443311 11222222 45678999999999998775432222 555555555
Q ss_pred HHHHH--HHHHHhcCccccCCCCCCeEEccCCCCceEEEecccccccCHH
Q 002031 274 ITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSSS 321 (977)
Q Consensus 274 l~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~~ 321 (977)
+.+++ +..+|..|++|+|++|+||+++.+ +.++|+|||++......
T Consensus 109 ~~ql~~~l~~lh~~~~~h~dl~~~nil~~~~--~~~~l~dfg~~~~~~~~ 156 (258)
T smart00219 109 ALQIARGMEYLESKNFIHRDLAARNCLVGEN--LVVKISDFGLSRDLYDD 156 (258)
T ss_pred HHHHHHHHHHHhcCCeeecccccceEEEccC--CeEEEcccCCceecccc
Confidence 55444 778899999999999999999865 78999999998876543
|
Phosphotransferases. Tyrosine-specific kinase subfamily. |
| >cd05083 PTKc_Chk Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase | Back alignment and domain information |
|---|
Probab=99.17 E-value=9.6e-11 Score=126.81 Aligned_cols=136 Identities=18% Similarity=0.159 Sum_probs=90.7
Q ss_pred cccccccccEEEEEEecCCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCcHHHHH
Q 002031 124 TPLATASIAQVHRATLVDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEAE 203 (977)
Q Consensus 124 ~piasaSigqV~~A~l~~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea~ 203 (977)
+.+|.|++|+||++.. +|+.||||+.+..... -.+.+|..
T Consensus 12 ~~lg~g~~g~v~~~~~-~~~~~~iK~~~~~~~~---------------------------------------~~~~~e~~ 51 (254)
T cd05083 12 EIIGEGEFGAVLQGEY-TGQKVAVKNIKCDVTA---------------------------------------QAFLEETA 51 (254)
T ss_pred eeeccCCCCceEeccc-CCCceEEEeecCcchH---------------------------------------HHHHHHHH
Confidence 6799999999999974 7899999986532110 01333444
Q ss_pred HHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeeecCCceEEeeccCCCCCCChHHHHh-cCCCHHHHHHHHHHHH--HH
Q 002031 204 NTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQSSETVLILEFMDGIRLNDCESLEA-FGVNKQKVVEEITRAY--AH 280 (977)
Q Consensus 204 n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~~~~~vLVmE~i~G~~L~~~~~~~~-~~~~~~~l~~~l~~~~--l~ 280 (977)
.+.++.+ ..-+.+...+.....+++|||++|.+|.++..... ...+...+...+.+++ +.
T Consensus 52 ~l~~~~~-----------------~~i~~~~~~~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~al~ 114 (254)
T cd05083 52 VMTKLHH-----------------KNLVRLLGVILHNGLYIVMELMSKGNLVNFLRTRGRALVSVIQLLQFSLDVAEGME 114 (254)
T ss_pred HHHhCCC-----------------CCcCeEEEEEcCCCcEEEEECCCCCCHHHHHHhcCcCCCCHHHHHHHHHHHHHHHH
Confidence 4333321 11122333333455789999999999987743221 1234444444333333 67
Q ss_pred HHHhcCccccCCCCCCeEEccCCCCceEEEeccccccc
Q 002031 281 QIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKL 318 (977)
Q Consensus 281 ~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l 318 (977)
.+|..|++|+|+||+||+++.+ +.++|+|||++...
T Consensus 115 ~lH~~~~~H~dl~p~nili~~~--~~~kl~Dfg~~~~~ 150 (254)
T cd05083 115 YLESKKLVHRDLAARNILVSED--GVAKVSDFGLARVG 150 (254)
T ss_pred HHHhCCeeccccCcceEEEcCC--CcEEECCCccceec
Confidence 8899999999999999999865 89999999998754
|
Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src ki |
| >cd05034 PTKc_Src_like Catalytic domain of Src kinase-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=99.17 E-value=1.1e-10 Score=126.71 Aligned_cols=137 Identities=17% Similarity=0.189 Sum_probs=94.6
Q ss_pred cccccccccEEEEEEecCCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCcHHHHH
Q 002031 124 TPLATASIAQVHRATLVDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEAE 203 (977)
Q Consensus 124 ~piasaSigqV~~A~l~~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea~ 203 (977)
+.||+|++|.||+|+..+++.||||+.+++.... -++.+|..
T Consensus 12 ~~ig~g~~~~v~~~~~~~~~~~~vK~~~~~~~~~--------------------------------------~~~~~e~~ 53 (261)
T cd05034 12 RKLGAGQFGEVWMGTWNGTTKVAVKTLKPGTMSP--------------------------------------EAFLQEAQ 53 (261)
T ss_pred eeeccCcceEEEEEEEcCCceEEEEEecCCccCH--------------------------------------HHHHHHHH
Confidence 6799999999999998888999999876532110 02334444
Q ss_pred HHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeee----cCCceEEeeccCCCCCCChHHHHh-cCCCHHHHHHHHHHHH
Q 002031 204 NTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ----SSETVLILEFMDGIRLNDCESLEA-FGVNKQKVVEEITRAY 278 (977)
Q Consensus 204 n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~----~~~~vLVmE~i~G~~L~~~~~~~~-~~~~~~~l~~~l~~~~ 278 (977)
.+.++.+ ..+++++. ....++||||++|.+|.+...... ..++...+...+.+++
T Consensus 54 ~l~~l~h--------------------~~i~~~~~~~~~~~~~~~v~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~i~ 113 (261)
T cd05034 54 IMKKLRH--------------------DKLVQLYAVCSEEEPIYIVTEYMSKGSLLDFLKSGEGKKLRLPQLVDMAAQIA 113 (261)
T ss_pred HHhhCCC--------------------CCEeeeeeeeecCCceEEEEeccCCCCHHHHHhccccCCCCHHHHHHHHHHHH
Confidence 4444321 12333332 356789999999999877643211 1244444444444433
Q ss_pred --HHHHHhcCccccCCCCCCeEEccCCCCceEEEecccccccCH
Q 002031 279 --AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 320 (977)
Q Consensus 279 --l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 320 (977)
+..+|..|++|+|+||.||+++.+ +.++|+|||.+..+..
T Consensus 114 ~al~~lh~~~i~h~di~p~nili~~~--~~~~l~d~g~~~~~~~ 155 (261)
T cd05034 114 EGMAYLESRNYIHRDLAARNILVGEN--LVCKIADFGLARLIED 155 (261)
T ss_pred HHHHHHHhCCcccCCcchheEEEcCC--CCEEECccccceeccc
Confidence 678899999999999999999865 8999999999887754
|
Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-t |
| >PHA03212 serine/threonine kinase US3; Provisional | Back alignment and domain information |
|---|
Probab=99.16 E-value=1.4e-10 Score=134.26 Aligned_cols=131 Identities=13% Similarity=0.080 Sum_probs=86.9
Q ss_pred cccccccccEEEEEEe-cCCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCcHHHH
Q 002031 124 TPLATASIAQVHRATL-VDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (977)
Q Consensus 124 ~piasaSigqV~~A~l-~~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea 202 (977)
+.||.|++|.||+|+. ++++.||||+... . .+.+|+
T Consensus 98 ~~lg~G~~g~V~~~~d~~~~~~vaiK~~~~---~----------------------------------------~~~~E~ 134 (391)
T PHA03212 98 ETFTPGAEGFAFACIDNKTCEHVVIKAGQR---G----------------------------------------GTATEA 134 (391)
T ss_pred EEEcCCCCeEEEEEEECCCCCEEEEechhh---h----------------------------------------hhHHHH
Confidence 5699999999999997 4799999995321 0 123455
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeee-cCCceEEeeccCCCCCCChHHHHhcCCCHHHHHHHHHHHH--H
Q 002031 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--A 279 (977)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~--l 279 (977)
+.+.++.+ ..-+.+-..+. ....++|||++.| .|.+... ....+....+...+.+++ +
T Consensus 135 ~il~~l~H-----------------pnIv~~~~~~~~~~~~~lv~e~~~~-~L~~~l~-~~~~l~~~~~~~i~~qi~~aL 195 (391)
T PHA03212 135 HILRAINH-----------------PSIIQLKGTFTYNKFTCLILPRYKT-DLYCYLA-AKRNIAICDILAIERSVLRAI 195 (391)
T ss_pred HHHHhCCC-----------------CCCCCEeEEEEECCeeEEEEecCCC-CHHHHHH-hcCCCCHHHHHHHHHHHHHHH
Confidence 55544432 01122222222 4556899999965 4433321 223445555555444444 7
Q ss_pred HHHHhcCccccCCCCCCeEEccCCCCceEEEeccccccc
Q 002031 280 HQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKL 318 (977)
Q Consensus 280 ~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l 318 (977)
..+|..|++|||+||+|||++.+ +.++|+|||++...
T Consensus 196 ~ylH~~~IvHrDiKP~NIll~~~--~~vkL~DFG~a~~~ 232 (391)
T PHA03212 196 QYLHENRIIHRDIKAENIFINHP--GDVCLGDFGAACFP 232 (391)
T ss_pred HHHHhCCcccCCCChHhEEEcCC--CCEEEEeCCccccc
Confidence 88999999999999999999865 88999999998643
|
|
| >cd05609 STKc_MAST Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine kinase | Back alignment and domain information |
|---|
Probab=99.16 E-value=1.5e-10 Score=129.13 Aligned_cols=137 Identities=12% Similarity=0.122 Sum_probs=89.2
Q ss_pred cccccccccEEEEEEec-CCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCcHHHH
Q 002031 124 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (977)
Q Consensus 124 ~piasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea 202 (977)
+.++.|++|.||+|+.+ +++.|+||...++.... .... -++.+|.
T Consensus 7 ~~l~~g~~~~v~~~~~~~~~~~v~ik~~~~~~~~~-~~~~---------------------------------~~~~~e~ 52 (305)
T cd05609 7 KLISNGAYGAVYLVRHKETRQRFAMKKINKQNLIL-RNQI---------------------------------QQVFVER 52 (305)
T ss_pred eEeecCCCeeEEEEEECCCCcEEEEEEeehhhhhh-HHHH---------------------------------HHHHHHH
Confidence 67999999999999975 68999999765431100 0000 0123344
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeee----cCCceEEeeccCCCCCCChHHHHhcCCCHHHHHHHHHHHH
Q 002031 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ----SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY 278 (977)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~----~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~ 278 (977)
+.+..++ + ..|++++. ....+|||||++|.+|.++.... ..+....+...+.+++
T Consensus 53 ~~l~~~~------------------~--~~i~~~~~~~~~~~~~~lv~e~~~g~~L~~~l~~~-~~~~~~~~~~~~~~i~ 111 (305)
T cd05609 53 DILTFAE------------------N--PFVVSMFCSFETKRHLCMVMEYVEGGDCATLLKNI-GALPVDMARMYFAETV 111 (305)
T ss_pred HHHHhCC------------------C--CCeeeeEEEEecCCEEEEEEecCCCCcHHHHHHHc-CCCCHHHHHHHHHHHH
Confidence 3333321 1 13334443 23458999999999998774322 2233333333333333
Q ss_pred --HHHHHhcCccccCCCCCCeEEccCCCCceEEEecccccc
Q 002031 279 --AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKK 317 (977)
Q Consensus 279 --l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~ 317 (977)
+..+|..|++|+|+||+||+++.+ +.++|+|||+++.
T Consensus 112 ~~l~~lH~~~i~H~dl~p~NIll~~~--~~~~l~dfg~~~~ 150 (305)
T cd05609 112 LALEYLHNYGIVHRDLKPDNLLITSM--GHIKLTDFGLSKI 150 (305)
T ss_pred HHHHHHHHCCccccCCchHHEEECCC--CCEEEeeCCCccc
Confidence 788999999999999999999865 8999999998763
|
Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. There are four mammalian MAST kinases, named MAST1-MAST4. MAST1 is also referred to as syntrophin-associated STK (SAST), while MAST2 is also called MAST205. MAST kinases are cytoskeletal associated kinases of unknown function that a |
| >cd05063 PTKc_EphR_A2 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2 | Back alignment and domain information |
|---|
Probab=99.16 E-value=1.6e-10 Score=126.05 Aligned_cols=143 Identities=20% Similarity=0.241 Sum_probs=94.1
Q ss_pred ccccccccccEEEEEEec-CCC---EEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCc
Q 002031 123 ETPLATASIAQVHRATLV-DGR---QVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDF 198 (977)
Q Consensus 123 ~~piasaSigqV~~A~l~-~G~---~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~ 198 (977)
.+.||.|++|+||+|+++ +++ .|+||..+++....... ++
T Consensus 10 ~~~lg~g~~g~vy~~~~~~~~~~~~~~~ik~~~~~~~~~~~~------------------------------------~~ 53 (268)
T cd05063 10 QKVIGAGEFGEVFRGILKMPGRKEVAVAIKTLKPGYTEKQRQ------------------------------------DF 53 (268)
T ss_pred eeEecCCCCccEEEEEEecCCCCceEEEEEeccccCCHHHHH------------------------------------HH
Confidence 467999999999999975 443 79999876543211000 23
Q ss_pred HHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeee-cCCceEEeeccCCCCCCChHHHHhcCCCHHHHHHHHHHH
Q 002031 199 NSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRA 277 (977)
Q Consensus 199 ~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~ 277 (977)
.+|++.+.++.+ ..-+.+...+. ....++||||++|.+|.+.........+...+...+.++
T Consensus 54 ~~e~~~l~~l~h-----------------~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l 116 (268)
T cd05063 54 LSEASIMGQFSH-----------------HNIIRLEGVVTKFKPAMIITEYMENGALDKYLRDHDGEFSSYQLVGMLRGI 116 (268)
T ss_pred HHHHHHHhcCCC-----------------CCeeEEEEEEccCCCcEEEEEcCCCCCHHHHHHhcCCCCCHHHHHHHHHHH
Confidence 344443333321 11122222222 455689999999999987643222234455555444443
Q ss_pred H--HHHHHhcCccccCCCCCCeEEccCCCCceEEEecccccccCH
Q 002031 278 Y--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 320 (977)
Q Consensus 278 ~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 320 (977)
. +..+|..|++|+|+||.||+++.+ +.++|+|||++..+..
T Consensus 117 ~~al~~lH~~~i~H~dlkp~Nili~~~--~~~kl~dfg~~~~~~~ 159 (268)
T cd05063 117 AAGMKYLSDMNYVHRDLAARNILVNSN--LECKVSDFGLSRVLED 159 (268)
T ss_pred HHHHHHHHHCCeeccccchhhEEEcCC--CcEEECCCccceeccc
Confidence 3 788899999999999999999865 8899999999877654
|
Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored |
| >cd07880 STKc_p38gamma_MAPK12 Catalytic domain of the Serine/Threonine Kinase, p38gamma Mitogen-Activated Protein Kinase | Back alignment and domain information |
|---|
Probab=99.16 E-value=1.3e-10 Score=132.17 Aligned_cols=157 Identities=17% Similarity=0.235 Sum_probs=98.8
Q ss_pred HHHHhCCChhhcccccC-ccccccccccEEEEEEe-cCCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCch
Q 002031 106 IEREFGESMGGMFMDFV-ETPLATASIAQVHRATL-VDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNP 183 (977)
Q Consensus 106 l~~elg~~~~~~f~~~d-~~piasaSigqV~~A~l-~~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~ 183 (977)
+++|.+..+.++...+. .+.||.|++|.||+|+. .+|+.||||+.+.......
T Consensus 2 ~~~~~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~------------------------- 56 (343)
T cd07880 2 YRQEVNKTIWEVPDRYRDLKQVGSGAYGTVCSALDRRTGAKVAIKKLYRPFQSEL------------------------- 56 (343)
T ss_pred hhhhhhhhhhccccceEEEEEeeecCCeEEEEEEECCCCcEEEEEEecccccchH-------------------------
Confidence 34555555555544443 36899999999999986 4899999998653211100
Q ss_pred hHHHHhhhcccccCcHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeee-------cCCceEEeeccCCCCCCC
Q 002031 184 IIDEWCKEAPKELDFNSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-------SSETVLILEFMDGIRLND 256 (977)
Q Consensus 184 ~~~e~~~~l~~Eld~~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-------~~~~vLVmE~i~G~~L~~ 256 (977)
.. -.+.+|+..+.++.+. .-+.+..++. ....+|||||+ |.+|.+
T Consensus 57 ----~~------~~~~~E~~~l~~l~h~-----------------~iv~~~~~~~~~~~~~~~~~~~lv~e~~-~~~l~~ 108 (343)
T cd07880 57 ----FA------KRAYRELRLLKHMKHE-----------------NVIGLLDVFTPDLSLDRFHDFYLVMPFM-GTDLGK 108 (343)
T ss_pred ----HH------HHHHHHHHHHHhcCCC-----------------CccceeeeecCCccccccceEEEEEecC-CCCHHH
Confidence 00 0123344444444220 0111222221 23458999999 667765
Q ss_pred hHHHHhcCCCHHHHHHHHHHHH--HHHHHhcCccccCCCCCCeEEccCCCCceEEEecccccccC
Q 002031 257 CESLEAFGVNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 319 (977)
Q Consensus 257 ~~~~~~~~~~~~~l~~~l~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~ 319 (977)
+. ....++...+...+.+++ +..+|..|++|+|+||.||+++.+ +.++|+|||++..+.
T Consensus 109 ~~--~~~~l~~~~~~~i~~qi~~al~~LH~~gi~H~dlkp~Nill~~~--~~~kl~dfg~~~~~~ 169 (343)
T cd07880 109 LM--KHEKLSEDRIQFLVYQMLKGLKYIHAAGIIHRDLKPGNLAVNED--CELKILDFGLARQTD 169 (343)
T ss_pred HH--hcCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCC--CCEEEeecccccccc
Confidence 53 223455555544444443 788999999999999999999865 889999999987654
|
Serine/Threonine Kinases (STKs), p38gamma subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38gamma subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38gamma, also called MAPK12 |
| >cd07873 STKc_PCTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase | Back alignment and domain information |
|---|
Probab=99.16 E-value=9.8e-11 Score=130.36 Aligned_cols=139 Identities=17% Similarity=0.154 Sum_probs=89.8
Q ss_pred cccccccccEEEEEEec-CCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCcHHHH
Q 002031 124 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (977)
Q Consensus 124 ~piasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea 202 (977)
+.||.|++|.||+|+.+ +++.||+|..+....... ...+.+|.
T Consensus 12 ~~lg~g~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~------------------------------------~~~~~~E~ 55 (301)
T cd07873 12 DKLGEGTYATVYKGRSKLTDNLVALKEIRLEHEEGA------------------------------------PCTAIREV 55 (301)
T ss_pred eEeccCcCEEEEEEEEcCCCcEEEEEEEecccccCc------------------------------------hhHHHHHH
Confidence 67999999999999975 789999998754321110 00123344
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeee-cCCceEEeeccCCCCCCChHHHHhcCCCHHHHHHHHHHHH--H
Q 002031 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--A 279 (977)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~--l 279 (977)
..+.++.+ ..-+.+-..+. ....++||||++| +|.+........++...+...+.+++ +
T Consensus 56 ~~l~~l~h-----------------~nI~~~~~~~~~~~~~~lv~e~~~~-~l~~~l~~~~~~~~~~~~~~~~~qi~~aL 117 (301)
T cd07873 56 SLLKDLKH-----------------ANIVTLHDIIHTEKSLTLVFEYLDK-DLKQYLDDCGNSINMHNVKLFLFQLLRGL 117 (301)
T ss_pred HHHHhcCC-----------------CCcceEEEEEecCCeEEEEEecccc-CHHHHHHhcCCCCCHHHHHHHHHHHHHHH
Confidence 44444322 01122222222 4556899999986 55443222222345555554444443 7
Q ss_pred HHHHhcCccccCCCCCCeEEccCCCCceEEEeccccccc
Q 002031 280 HQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKL 318 (977)
Q Consensus 280 ~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l 318 (977)
..+|..|++|+|+||+||+++.+ +.++|+|||++...
T Consensus 118 ~~lH~~~i~H~dlkp~Nil~~~~--~~~kl~dfg~~~~~ 154 (301)
T cd07873 118 NYCHRRKVLHRDLKPQNLLINER--GELKLADFGLARAK 154 (301)
T ss_pred HHHHhCCeeCCCCCHHHEEECCC--CcEEECcCcchhcc
Confidence 88999999999999999999865 89999999998654
|
Serine/Threonine Kinases (STKs), PCTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may pl |
| >cd06631 STKc_YSK4 Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4 | Back alignment and domain information |
|---|
Probab=99.15 E-value=1.8e-10 Score=125.49 Aligned_cols=144 Identities=13% Similarity=0.126 Sum_probs=93.3
Q ss_pred cccccccccEEEEEEecCCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCcHHHHH
Q 002031 124 TPLATASIAQVHRATLVDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEAE 203 (977)
Q Consensus 124 ~piasaSigqV~~A~l~~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea~ 203 (977)
+.||.|++|+||+|...+|+.||||+.+.........+ +. .-.+.+|+.
T Consensus 6 ~~ig~g~~~~v~~~~~~~~~~~avk~~~~~~~~~~~~~------------------------~~-------~~~~~~e~~ 54 (265)
T cd06631 6 EVLGKGAYGTVYCGLTNQGQLIAVKQVELDTSNVLAAE------------------------KE-------YEKLQEEVD 54 (265)
T ss_pred ceEeccCCeEEEEEEEcCCCeEEEEEeecCccchhhHH------------------------HH-------HHHHHHHHH
Confidence 56899999999999988899999998754321110000 00 002344555
Q ss_pred HHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeee-cCCceEEeeccCCCCCCChHHHHhcCCCHHHHHHHHHHHH--HH
Q 002031 204 NTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--AH 280 (977)
Q Consensus 204 n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~--l~ 280 (977)
.+.++++ ..-+.+..... ....+++|||++|.+|.++... ........+...+.++. +.
T Consensus 55 ~l~~l~~-----------------~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~-~~~~~~~~~~~~~~qi~~~l~ 116 (265)
T cd06631 55 LLKSLKH-----------------VNIVQYLGTCLDDNTISIFMEFVPGGSISSILNR-FGPLPEPVFCKYTKQILDGVA 116 (265)
T ss_pred HHHhcCC-----------------CCEeeEeeEeecCCeEEEEEecCCCCcHHHHHHh-cCCCCHHHHHHHHHHHHHHHH
Confidence 5444432 01122222222 4556899999999999877432 12334444443333333 67
Q ss_pred HHHhcCccccCCCCCCeEEccCCCCceEEEeccccccc
Q 002031 281 QIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKL 318 (977)
Q Consensus 281 ~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l 318 (977)
.+|..|++|+|++|.||+++.+ +.++|+|||++..+
T Consensus 117 ~lH~~~i~H~dl~p~nil~~~~--~~~~l~dfg~~~~~ 152 (265)
T cd06631 117 YLHNNCVVHRDIKGNNVMLMPN--GIIKLIDFGCARRL 152 (265)
T ss_pred HHHhCCcccCCcCHHhEEECCC--CeEEeccchhhHhh
Confidence 8899999999999999999855 89999999988765
|
Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. |
| >PRK01723 3-deoxy-D-manno-octulosonic-acid kinase; Reviewed | Back alignment and domain information |
|---|
Probab=99.15 E-value=4.2e-10 Score=121.07 Aligned_cols=146 Identities=14% Similarity=0.155 Sum_probs=94.1
Q ss_pred cccc-cccccEEEEEEecCCCEEEEEEec-CChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCcHHH
Q 002031 124 TPLA-TASIAQVHRATLVDGRQVVVKVQH-QGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSE 201 (977)
Q Consensus 124 ~pia-saSigqV~~A~l~~G~~VAVKv~~-p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~E 201 (977)
..+| .|+.|.||+... +|+.+|||..+ +++-..+..+- + .......-.+.+|
T Consensus 37 ~~lg~~~g~gtv~~v~~-~~~~~vlk~~~r~~~i~kv~~~~----------------~---------~~~~~~~~r~~rE 90 (239)
T PRK01723 37 RVVGSAKGRGTTWFVQT-PGVNWVLRHYRRGGLIGKLSKDR----------------Y---------LFTGLERTRAFAE 90 (239)
T ss_pred ceeecCCCCccEEEEEe-CCceEEEEEeeEcchHHhhhhhc----------------c---------cccchhhhHHHHH
Confidence 4576 899999999987 57899999763 44322211110 0 0000112245677
Q ss_pred HHHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeee-----cC---CceEEeeccCC-CCCCChHHHHhcCCCHHHHHH
Q 002031 202 AENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-----SS---ETVLILEFMDG-IRLNDCESLEAFGVNKQKVVE 272 (977)
Q Consensus 202 a~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-----~~---~~vLVmE~i~G-~~L~~~~~~~~~~~~~~~l~~ 272 (977)
.+.+.++.+ .++.+|+++. .. +.+||||+++| .+|.++. .....+. ....
T Consensus 91 ~~ll~~L~~------------------~gi~vP~pl~~~~~~~~~~~~~~lV~e~l~G~~~L~~~l--~~~~l~~-~~~~ 149 (239)
T PRK01723 91 FRLLAQLYE------------------AGLPVPRPIAARVVRHGLFYRADILIERIEGARDLVALL--QEAPLSE-EQWQ 149 (239)
T ss_pred HHHHHHHHh------------------CCCCCceeEeeeeeecCcceeeeEEEEecCCCCCHHHHH--hcCCCCH-HHHH
Confidence 788887764 2345566543 11 23599999998 5666552 2222333 2333
Q ss_pred HHHHHHHHHHHhcCccccCCCCCCeEEccCCCCceEEEecccccccC
Q 002031 273 EITRAYAHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 319 (977)
Q Consensus 273 ~l~~~~l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~ 319 (977)
.+.+ .+..+|..|++|+|+||+|||++.+ ++++|||||.+..-.
T Consensus 150 ~i~~-~l~~lH~~GI~HrDlkp~NILv~~~--~~v~LIDfg~~~~~~ 193 (239)
T PRK01723 150 AIGQ-LIARFHDAGVYHADLNAHNILLDPD--GKFWLIDFDRGELRT 193 (239)
T ss_pred HHHH-HHHHHHHCCCCCCCCCchhEEEcCC--CCEEEEECCCcccCC
Confidence 3333 4889999999999999999999865 789999999988765
|
|
| >cd05037 PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases | Back alignment and domain information |
|---|
Probab=99.15 E-value=1.2e-10 Score=126.08 Aligned_cols=81 Identities=17% Similarity=0.107 Sum_probs=60.6
Q ss_pred CCceEEeeccCCCCCCChHHHHhcCCCHHHHHHHHHHHH--HHHHHhcCccccCCCCCCeEEccCCC-----CceEEEec
Q 002031 240 SETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPP-----HRPILLDF 312 (977)
Q Consensus 240 ~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~-----g~i~LiDF 312 (977)
...++||||++|.+|.++.......++...+...+.++. +..+|..|++|+|+||.||+++.++. ..++|+||
T Consensus 73 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dlkp~Nill~~~~~~~~~~~~~kl~Df 152 (259)
T cd05037 73 DENIMVEEYVKFGPLDVFLHREKNNVSLHWKLDVAKQLASALHYLEDKKLVHGNVCGKNILVARYGLNEGYVPFIKLSDP 152 (259)
T ss_pred CCcEEEEEcCCCCcHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHhhCCeecccCccceEEEecCccccCCceeEEeCCC
Confidence 567999999999999877543332455555555444444 78899999999999999999986521 16999999
Q ss_pred ccccccCH
Q 002031 313 GLTKKLSS 320 (977)
Q Consensus 313 G~~~~l~~ 320 (977)
|++..+..
T Consensus 153 g~a~~~~~ 160 (259)
T cd05037 153 GIPITVLS 160 (259)
T ss_pred Cccccccc
Confidence 99887543
|
Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; pseudokinase domain (repeat1). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the ki |
| >PHA03211 serine/threonine kinase US3; Provisional | Back alignment and domain information |
|---|
Probab=99.15 E-value=1e-10 Score=137.75 Aligned_cols=134 Identities=20% Similarity=0.119 Sum_probs=90.2
Q ss_pred ccccccccccEEEEEEec-CCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCcHHH
Q 002031 123 ETPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSE 201 (977)
Q Consensus 123 ~~piasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~E 201 (977)
...||.|++|.||+|+.. +++.||||..... .+.+|
T Consensus 174 ~~~Lg~G~~G~Vy~a~~~~~~~~vavK~~~~~-------------------------------------------~~~~E 210 (461)
T PHA03211 174 HRALTPGSEGCVFESSHPDYPQRVVVKAGWYA-------------------------------------------SSVHE 210 (461)
T ss_pred EEEEccCCCeEEEEEEECCCCCEEEEeccccc-------------------------------------------CHHHH
Confidence 367999999999999974 6899999942110 12345
Q ss_pred HHHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeee-cCCceEEeeccCCCCCCChHHHHhcCCCHHHHHHHHHHHH--
Q 002031 202 AENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY-- 278 (977)
Q Consensus 202 a~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~-- 278 (977)
++.+.++.+ ...+.+-.++. ....+||||++.| .|.+........++...+...+.++.
T Consensus 211 ~~iL~~L~H-----------------pnIv~l~~~~~~~~~~~lv~e~~~~-~L~~~l~~~~~~l~~~~~~~i~~qi~~a 272 (461)
T PHA03211 211 ARLLRRLSH-----------------PAVLALLDVRVVGGLTCLVLPKYRS-DLYTYLGARLRPLGLAQVTAVARQLLSA 272 (461)
T ss_pred HHHHHHCCC-----------------CCCCcEEEEEEECCEEEEEEEccCC-CHHHHHHhcCCCCCHHHHHHHHHHHHHH
Confidence 555555432 01122222222 4567899999975 44443221222356666666555554
Q ss_pred HHHHHhcCccccCCCCCCeEEccCCCCceEEEecccccccC
Q 002031 279 AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 319 (977)
Q Consensus 279 l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~ 319 (977)
+..+|..|++|+|+||.|||++.+ +.++|+|||+++.+.
T Consensus 273 L~yLH~~gIvHrDLKP~NILl~~~--~~vkL~DFGla~~~~ 311 (461)
T PHA03211 273 IDYIHGEGIIHRDIKTENVLVNGP--EDICLGDFGAACFAR 311 (461)
T ss_pred HHHHHHCCEEECcCCHHHEEECCC--CCEEEcccCCceecc
Confidence 788999999999999999999855 889999999987654
|
|
| >KOG0610 consensus Putative serine/threonine protein kinase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.15 E-value=1.3e-10 Score=127.49 Aligned_cols=139 Identities=18% Similarity=0.214 Sum_probs=89.5
Q ss_pred cccccccccEEEEEEec-CCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCcHHHH
Q 002031 124 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (977)
Q Consensus 124 ~piasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea 202 (977)
+-+|.|.+|.||.++++ ++...|+||+....-.. . +++.+ ...|.
T Consensus 83 k~LG~GdiG~VyL~~l~~t~~~fAmKVmdK~~l~~---r----kKl~R---------------------------a~tE~ 128 (459)
T KOG0610|consen 83 KRLGCGDIGTVYLVELRGTNCLFAMKVMDKESLAS---R----KKLKR---------------------------AQTER 128 (459)
T ss_pred HHcCCCCceeEEEEEecCCCceEEEEEecHHHHhh---h----hHHHH---------------------------HHHHH
Confidence 67999999999999996 46889999974321100 0 00100 01122
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeee--cCC--ceEEeeccCCCCCCChHHHHhcC-CCHHHHHHHHHH-
Q 002031 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ--SSE--TVLILEFMDGIRLNDCESLEAFG-VNKQKVVEEITR- 276 (977)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~--~~~--~vLVmE~i~G~~L~~~~~~~~~~-~~~~~l~~~l~~- 276 (977)
.-+..+ ....+|.+|. .++ -+||||||+|+.|..+.+.+... +....+--...+
T Consensus 129 eIL~~l--------------------DHPFlPTLYa~fet~~~~cl~meyCpGGdL~~LrqkQp~~~fse~~aRFYaAEv 188 (459)
T KOG0610|consen 129 EILSLL--------------------DHPFLPTLYASFETDKYSCLVMEYCPGGDLHSLRQKQPGKRFSESAARFYAAEV 188 (459)
T ss_pred HHHHhc--------------------CCCccchhhheeeccceeEEEEecCCCccHHHHHhhCCCCccchhhHHHHHHHH
Confidence 222222 2345777775 333 47999999999987653322111 222222222222
Q ss_pred -HHHHHHHhcCccccCCCCCCeEEccCCCCceEEEeccccccc
Q 002031 277 -AYAHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKL 318 (977)
Q Consensus 277 -~~l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l 318 (977)
+.++.+|-.|||-||+||+||||.++ |.|.|.||-++.+.
T Consensus 189 l~ALEYLHmlGivYRDLKPENILvred--GHIMLsDFDLS~~~ 229 (459)
T KOG0610|consen 189 LLALEYLHMLGIVYRDLKPENILVRED--GHIMLSDFDLSLRC 229 (459)
T ss_pred HHHHHHHHhhceeeccCCcceeEEecC--CcEEeeeccccccC
Confidence 23888999999999999999999976 99999999987665
|
|
| >cd05103 PTKc_VEGFR2 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 2 | Back alignment and domain information |
|---|
Probab=99.15 E-value=1.5e-10 Score=131.64 Aligned_cols=39 Identities=21% Similarity=0.313 Sum_probs=34.8
Q ss_pred HHHHHhcCccccCCCCCCeEEccCCCCceEEEecccccccC
Q 002031 279 AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 319 (977)
Q Consensus 279 l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~ 319 (977)
+..+|..|++|+|+||.||+++.+ +.++|+|||++..+.
T Consensus 192 l~~lH~~~i~H~dikp~Nil~~~~--~~~kl~dfg~~~~~~ 230 (343)
T cd05103 192 MEFLASRKCIHRDLAARNILLSEN--NVVKICDFGLARDIY 230 (343)
T ss_pred HHHHHhCCeecCCCccCeEEEcCC--CcEEEEecccccccc
Confidence 678899999999999999999865 899999999987653
|
Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 2 (VEGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR2 (or Flk1) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. The carboxyl terminus of VEGFR2 plays an important role in its autophosp |
| >cd05072 PTKc_Lyn Catalytic domain of the Protein Tyrosine Kinase, Lyn | Back alignment and domain information |
|---|
Probab=99.15 E-value=2e-10 Score=124.69 Aligned_cols=139 Identities=20% Similarity=0.229 Sum_probs=94.1
Q ss_pred cccccccccEEEEEEecCCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCcHHHHH
Q 002031 124 TPLATASIAQVHRATLVDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEAE 203 (977)
Q Consensus 124 ~piasaSigqV~~A~l~~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea~ 203 (977)
+.||.|++|.||+|...+++.||||...+.-.. . + .+.+|..
T Consensus 12 ~~lg~g~~g~v~~~~~~~~~~v~iK~~~~~~~~-----~-----------------------~----------~~~~e~~ 53 (261)
T cd05072 12 KKLGAGQFGEVWMGYYNNSTKVAVKTLKPGTMS-----V-----------------------Q----------AFLEEAN 53 (261)
T ss_pred eecCCcCCceEEEEEecCCceEEEEEccCCchh-----H-----------------------H----------HHHHHHH
Confidence 579999999999999888899999986653210 0 0 1334544
Q ss_pred HHHHHHHHhCCCCCCCCCCCCCCCCCC-eEeceeee-cCCceEEeeccCCCCCCChHHHHh-cCCCHHHHHHHHHHHH--
Q 002031 204 NTRIVSANLGCKNKHEDSNKKPAYEVD-VLIPEVIQ-SSETVLILEFMDGIRLNDCESLEA-FGVNKQKVVEEITRAY-- 278 (977)
Q Consensus 204 n~~~~~~~~~~~~~~~~~~~~~~~~~~-v~vP~v~~-~~~~vLVmE~i~G~~L~~~~~~~~-~~~~~~~l~~~l~~~~-- 278 (977)
.+.++.+ +. +.+-..+. ....+|+|||++|.+|.++..... .......+...+.++.
T Consensus 54 ~l~~l~h------------------~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~l~~~ 115 (261)
T cd05072 54 LMKTLQH------------------DKLVRLYAVVTKEEPIYIITEYMAKGSLLDFLKSDEGGKVLLPKLIDFSAQIAEG 115 (261)
T ss_pred HHHhCCC------------------CCeeeEEEEEcCCCCcEEEEecCCCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHH
Confidence 4444321 11 11111222 455689999999999987643221 2234444444444443
Q ss_pred HHHHHhcCccccCCCCCCeEEccCCCCceEEEecccccccCH
Q 002031 279 AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 320 (977)
Q Consensus 279 l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 320 (977)
+..+|..|++|+|++|.||+++.+ +.++|.|||.+..+..
T Consensus 116 l~~LH~~~i~H~dl~p~nili~~~--~~~~l~dfg~~~~~~~ 155 (261)
T cd05072 116 MAYIERKNYIHRDLRAANVLVSES--LMCKIADFGLARVIED 155 (261)
T ss_pred HHHHHHCCeeccccchhhEEecCC--CcEEECCCccceecCC
Confidence 778899999999999999999865 8899999999987653
|
Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth fa |
| >cd05082 PTKc_Csk Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase | Back alignment and domain information |
|---|
Probab=99.15 E-value=1.6e-10 Score=125.14 Aligned_cols=137 Identities=21% Similarity=0.214 Sum_probs=91.4
Q ss_pred cccccccccEEEEEEecCCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCcHHHHH
Q 002031 124 TPLATASIAQVHRATLVDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEAE 203 (977)
Q Consensus 124 ~piasaSigqV~~A~l~~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea~ 203 (977)
+.||.|++|.||+|.. .|+.||+|..+.+... -+|.+|+.
T Consensus 12 ~~lg~g~~~~v~~~~~-~~~~~~~k~~~~~~~~---------------------------------------~~~~~e~~ 51 (256)
T cd05082 12 QTIGKGEFGDVMLGDY-RGNKVAVKCIKNDATA---------------------------------------QAFLAEAS 51 (256)
T ss_pred eeecccCCCeEEEEEE-cCCcEEEEEeCCCchH---------------------------------------HHHHHHHH
Confidence 5699999999999986 5889999976432110 02344555
Q ss_pred HHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeee--cCCceEEeeccCCCCCCChHHHHhc-CCCHHHHHHHHHHHH--
Q 002031 204 NTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ--SSETVLILEFMDGIRLNDCESLEAF-GVNKQKVVEEITRAY-- 278 (977)
Q Consensus 204 n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~--~~~~vLVmE~i~G~~L~~~~~~~~~-~~~~~~l~~~l~~~~-- 278 (977)
.+.++.+ ...+.+...+. ....+++|||++|.+|.+....... ..+...+...+.++.
T Consensus 52 ~l~~l~~-----------------~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~ 114 (256)
T cd05082 52 VMTQLRH-----------------SNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEA 114 (256)
T ss_pred HHHhCCC-----------------CCeeeEEEEEEcCCCceEEEEECCCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHH
Confidence 5444422 11122222222 3456899999999999876432211 134444444444443
Q ss_pred HHHHHhcCccccCCCCCCeEEccCCCCceEEEecccccccC
Q 002031 279 AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 319 (977)
Q Consensus 279 l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~ 319 (977)
+..+|..|++|+|++|+||+++.+ +.++|+|||++....
T Consensus 115 l~~lH~~~i~H~dlkp~nil~~~~--~~~kl~dfg~~~~~~ 153 (256)
T cd05082 115 MEYLEANNFVHRDLAARNVLVSED--NVAKVSDFGLTKEAS 153 (256)
T ss_pred HHHHHhCCEeccccchheEEEcCC--CcEEecCCccceecc
Confidence 788999999999999999999865 899999999987653
|
Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, re |
| >PHA03209 serine/threonine kinase US3; Provisional | Back alignment and domain information |
|---|
Probab=99.15 E-value=1.1e-10 Score=133.59 Aligned_cols=131 Identities=15% Similarity=0.130 Sum_probs=86.0
Q ss_pred cccccccccEEEEEEec-CCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCcHHHH
Q 002031 124 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (977)
Q Consensus 124 ~piasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea 202 (977)
+.||.|++|+||+|+.+ +++.||+|+...+. ...|+
T Consensus 72 ~~lg~G~~g~Vy~~~~~~~~~~valK~~~~~~-------------------------------------------~~~E~ 108 (357)
T PHA03209 72 KTLTPGSEGRVFVATKPGQPDPVVLKIGQKGT-------------------------------------------TLIEA 108 (357)
T ss_pred EEecCCCCeEEEEEEECCCCceEEEEeCCccc-------------------------------------------cHHHH
Confidence 67999999999999974 67899999753321 11233
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeee-cCCceEEeeccCCCCCCChHHHHhcCCCHHHHHHHHHHHH--H
Q 002031 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--A 279 (977)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~--l 279 (977)
..+.++.+ ...+.+-..+. ....++|||++.| .|.+........+....+...+.+++ +
T Consensus 109 ~~l~~l~h-----------------~~iv~~~~~~~~~~~~~lv~e~~~~-~l~~~l~~~~~~~~~~~~~~i~~qi~~aL 170 (357)
T PHA03209 109 MLLQNVNH-----------------PSVIRMKDTLVSGAITCMVLPHYSS-DLYTYLTKRSRPLPIDQALIIEKQILEGL 170 (357)
T ss_pred HHHHhCCC-----------------CCCcChhheEEeCCeeEEEEEccCC-cHHHHHHhccCCCCHHHHHHHHHHHHHHH
Confidence 33333221 00111112222 3456899999976 44444322233455555555544444 7
Q ss_pred HHHHhcCccccCCCCCCeEEccCCCCceEEEecccccc
Q 002031 280 HQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKK 317 (977)
Q Consensus 280 ~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~ 317 (977)
..+|..|++|||+||.|||++.+ +.++|+|||++..
T Consensus 171 ~~LH~~~ivHrDlkp~Nill~~~--~~~kl~DfG~a~~ 206 (357)
T PHA03209 171 RYLHAQRIIHRDVKTENIFINDV--DQVCIGDLGAAQF 206 (357)
T ss_pred HHHHHCCeecCCCCHHHEEECCC--CCEEEecCccccc
Confidence 88999999999999999999865 8899999999864
|
|
| >KOG0611 consensus Predicted serine/threonine protein kinase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.15 E-value=6.8e-11 Score=128.13 Aligned_cols=141 Identities=21% Similarity=0.280 Sum_probs=94.1
Q ss_pred cccccccccEEEEEEe-cCCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCcHHHH
Q 002031 124 TPLATASIAQVHRATL-VDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (977)
Q Consensus 124 ~piasaSigqV~~A~l-~~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea 202 (977)
+-+|+|.+|.|-+|+. +.|+.||||.++.+--+ -..|+- ..++|.
T Consensus 59 etLGkGTYGKVk~A~e~~sgR~VAiKsIrKdkIk-deqDlv---------------------------------hIRREI 104 (668)
T KOG0611|consen 59 ETLGKGTYGKVKLAYEHKSGREVAIKSIRKDKIK-DEQDLV---------------------------------HIRREI 104 (668)
T ss_pred HHhcCCcccceeehhhccCCcEeehhhhhhhhcc-cHHHHH---------------------------------HHHHHH
Confidence 5689999999999996 68999999976543110 011221 123344
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeee-cCCceEEeeccCCCCCCChHHHHhcCCCH---HHHHHHHHHHH
Q 002031 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAFGVNK---QKVVEEITRAY 278 (977)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLVmE~i~G~~L~~~~~~~~~~~~~---~~l~~~l~~~~ 278 (977)
+-+..+.+ ...+.|-+|+. ..+-||||||..|+.|.|+...+. .+.. ..+.+.++.+
T Consensus 105 eIMSsLNH-----------------PhII~IyEVFENkdKIvivMEYaS~GeLYDYiSer~-~LsErEaRhfFRQIvSA- 165 (668)
T KOG0611|consen 105 EIMSSLNH-----------------PHIIQIYEVFENKDKIVIVMEYASGGELYDYISERG-SLSEREARHFFRQIVSA- 165 (668)
T ss_pred HHHhhcCC-----------------CceeehhhhhcCCceEEEEEEecCCccHHHHHHHhc-cccHHHHHHHHHHHHHH-
Confidence 43333321 12344555665 567799999999999999865322 2222 2233333333
Q ss_pred HHHHHhcCccccCCCCCCeEEccCCCCceEEEecccccccC
Q 002031 279 AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 319 (977)
Q Consensus 279 l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~ 319 (977)
....|.++++|||+|-.|||++.+ +.++|.|||+.-.+.
T Consensus 166 VhYCHknrVvHRDLKLENILLD~N--~NiKIADFGLSNly~ 204 (668)
T KOG0611|consen 166 VHYCHKNRVVHRDLKLENILLDQN--NNIKIADFGLSNLYA 204 (668)
T ss_pred HHHHhhccceecccchhheeecCC--CCeeeeccchhhhhc
Confidence 556789999999999999999965 899999999987653
|
|
| >cd05066 PTKc_EphR_A Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors | Back alignment and domain information |
|---|
Probab=99.15 E-value=1.7e-10 Score=125.87 Aligned_cols=142 Identities=18% Similarity=0.190 Sum_probs=94.2
Q ss_pred cccccccccEEEEEEec-C---CCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCcH
Q 002031 124 TPLATASIAQVHRATLV-D---GRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFN 199 (977)
Q Consensus 124 ~piasaSigqV~~A~l~-~---G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~ 199 (977)
+.||+|.+|.||+|+.+ + +..||||..++....... -+|.
T Consensus 10 ~~lg~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~~~~~~------------------------------------~~~~ 53 (267)
T cd05066 10 KVIGAGEFGEVCSGRLKLPGKREIPVAIKTLKAGYTEKQR------------------------------------RDFL 53 (267)
T ss_pred eeecccCCCceEEEEEecCCCCceEEEEEECCCCCCHHHH------------------------------------HHHH
Confidence 67899999999999874 3 337999987654321100 0233
Q ss_pred HHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeee-cCCceEEeeccCCCCCCChHHHHhcCCCHHHHHHHHHHHH
Q 002031 200 SEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY 278 (977)
Q Consensus 200 ~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~ 278 (977)
+|...+.++.+ ..-+.+...+. ....++||||++|.+|.++........+...+...+.++.
T Consensus 54 ~e~~~l~~l~h-----------------~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~i~~~i~ 116 (267)
T cd05066 54 SEASIMGQFDH-----------------PNIIHLEGVVTKSKPVMIVTEYMENGSLDAFLRKHDGQFTVIQLVGMLRGIA 116 (267)
T ss_pred HHHHHHHhCCC-----------------CCcceEEEEEecCCccEEEEEcCCCCCHHHHHHhcCCCCCHHHHHHHHHHHH
Confidence 45444444321 11223333332 4557899999999999877543222345555555444433
Q ss_pred --HHHHHhcCccccCCCCCCeEEccCCCCceEEEecccccccCH
Q 002031 279 --AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 320 (977)
Q Consensus 279 --l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 320 (977)
+..+|..|++|+|+||.||+++.+ +.++|+|||++..+..
T Consensus 117 ~~l~~lH~~~i~h~dlkp~nili~~~--~~~~l~dfg~~~~~~~ 158 (267)
T cd05066 117 SGMKYLSDMGYVHRDLAARNILVNSN--LVCKVSDFGLSRVLED 158 (267)
T ss_pred HHHHHHHHCCEeehhhchhcEEECCC--CeEEeCCCCccccccc
Confidence 678899999999999999999865 8899999999887653
|
Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellul |
| >cd05630 STKc_GRK6 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6 | Back alignment and domain information |
|---|
Probab=99.15 E-value=1.7e-10 Score=127.47 Aligned_cols=143 Identities=15% Similarity=0.128 Sum_probs=92.7
Q ss_pred cccccccccEEEEEEec-CCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCcHHHH
Q 002031 124 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (977)
Q Consensus 124 ~piasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea 202 (977)
+.||.|++|+||+|..+ +|+.||||...+....... .+-.+.+|.
T Consensus 6 ~~ig~G~~g~v~~~~~~~~~~~~avK~~~~~~~~~~~----------------------------------~~~~~~~E~ 51 (285)
T cd05630 6 RVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRK----------------------------------GESMALNEK 51 (285)
T ss_pred EEeecCCCeEEEEEEEcCCCceEEEEEEehhhccchH----------------------------------HHHHHHHHH
Confidence 56999999999999974 7999999976543211000 000122344
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeee-cCCceEEeeccCCCCCCChHHHH-hcCCCHHHHHHHHHHHH--
Q 002031 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLE-AFGVNKQKVVEEITRAY-- 278 (977)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLVmE~i~G~~L~~~~~~~-~~~~~~~~l~~~l~~~~-- 278 (977)
..+.++.+ ...+.+...+. ....++||||++|.+|.+..... ..+++...+...+.+++
T Consensus 52 ~il~~l~~-----------------~~i~~~~~~~~~~~~~~lv~e~~~g~~L~~~l~~~~~~~l~~~~~~~~~~qi~~~ 114 (285)
T cd05630 52 QILEKVNS-----------------RFVVSLAYAYETKDALCLVLTLMNGGDLKFHIYHMGEAGFEEGRAVFYAAEICCG 114 (285)
T ss_pred HHHHhCCC-----------------CCeeeeeEEEecCCEEEEEEEecCCCcHHHHHHHhcccCCCHHHHHHHHHHHHHH
Confidence 44433321 11122222222 34568999999999998764321 12355555555444444
Q ss_pred HHHHHhcCccccCCCCCCeEEccCCCCceEEEecccccccC
Q 002031 279 AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 319 (977)
Q Consensus 279 l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~ 319 (977)
+..+|..|++|+|+||.||+++.+ +.++|+|||++...+
T Consensus 115 l~~lH~~~iiH~dikp~Nil~~~~--~~~~l~Dfg~~~~~~ 153 (285)
T cd05630 115 LEDLHQERIVYRDLKPENILLDDH--GHIRISDLGLAVHVP 153 (285)
T ss_pred HHHHHhCCEEeCCCCHHHEEECCC--CCEEEeeccceeecC
Confidence 678899999999999999999865 889999999987654
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as |
| >cd06625 STKc_MEKK3_like Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.15 E-value=2.2e-10 Score=124.46 Aligned_cols=144 Identities=15% Similarity=0.110 Sum_probs=92.6
Q ss_pred ccccccccccEEEEEEe-cCCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCcHHH
Q 002031 123 ETPLATASIAQVHRATL-VDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSE 201 (977)
Q Consensus 123 ~~piasaSigqV~~A~l-~~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~E 201 (977)
.+.||.|++|+||+|+. .+|++||||+.+........ . .+ -.++.+|
T Consensus 7 ~~~lg~g~~~~vy~~~~~~~~~~~~lk~~~~~~~~~~~--~-----------------------~~-------~~~~~~e 54 (263)
T cd06625 7 GKLLGQGAFGRVYLCYDVDTGRELAVKQVPFDPDSPET--K-----------------------KE-------VNALECE 54 (263)
T ss_pred cceecCCCceEEEEEEEcCCCcEEEEEEEeecccchhh--H-----------------------HH-------HHHHHHH
Confidence 46899999999999997 47999999987643211000 0 00 0023455
Q ss_pred HHHHHHHHHHhCCCCCCCCCCCCCCCCCC-eEeceeee-cCCceEEeeccCCCCCCChHHHHhcCCCHHHHHHHHHHHH-
Q 002031 202 AENTRIVSANLGCKNKHEDSNKKPAYEVD-VLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY- 278 (977)
Q Consensus 202 a~n~~~~~~~~~~~~~~~~~~~~~~~~~~-v~vP~v~~-~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~- 278 (977)
++.+.++.+ +. +.+...+. ....++||||++|.+|.+.... ...+....+...+.+++
T Consensus 55 ~~~l~~l~~------------------~~i~~~~~~~~~~~~~~~v~e~~~~~~l~~~~~~-~~~~~~~~~~~~~~~l~~ 115 (263)
T cd06625 55 IQLLKNLQH------------------ERIVQYYGCLRDDETLSIFMEYMPGGSVKDQLKA-YGALTETVTRKYTRQILE 115 (263)
T ss_pred HHHHHhCCC------------------CCeeeeEEEEccCCeEEEEEEECCCCcHHHHHHH-hCCCCHHHHHHHHHHHHH
Confidence 555444421 11 22222222 4566899999999998776432 12233333333333332
Q ss_pred -HHHHHhcCccccCCCCCCeEEccCCCCceEEEecccccccC
Q 002031 279 -AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 319 (977)
Q Consensus 279 -l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~ 319 (977)
+..+|..|++|+|+||+||+++.+ ++++|+|||++..+.
T Consensus 116 ~l~~lH~~~i~H~dl~p~nilv~~~--~~~~l~dfg~~~~~~ 155 (263)
T cd06625 116 GVEYLHSNMIVHRDIKGANILRDSA--GNVKLGDFGASKRLQ 155 (263)
T ss_pred HHHHHHhCCeecCCCCHHHEEEcCC--CCEEEeecccceecc
Confidence 678899999999999999999855 899999999987654
|
Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades t |
| >KOG0587 consensus Traf2- and Nck-interacting kinase and related germinal center kinase (GCK) family protein kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.15 E-value=1.2e-10 Score=137.76 Aligned_cols=152 Identities=13% Similarity=0.173 Sum_probs=106.1
Q ss_pred CChhhcccccCccccccccccEEEEEEe-cCCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhh
Q 002031 112 ESMGGMFMDFVETPLATASIAQVHRATL-VDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCK 190 (977)
Q Consensus 112 ~~~~~~f~~~d~~piasaSigqV~~A~l-~~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~ 190 (977)
.+..+.|+-+ +-||.|.+|+||+++. ++|+.+||||+.|+....-..+++
T Consensus 15 pdp~d~~ei~--evig~Gtygkv~k~k~~~~~~~aa~kI~~~~~d~deEiE~e--------------------------- 65 (953)
T KOG0587|consen 15 PDPADIFEII--EVIGNGTYGKVYKGRHVKTGQLAAIKIMDPTEDEEEEIELE--------------------------- 65 (953)
T ss_pred CCCCCccEEE--EEEeeccceeEEEEeeeecCceeeeEeecCCccccHHHHHH---------------------------
Confidence 3455666554 3589999999999985 689999999999876532211111
Q ss_pred hcccccCcHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceee---e------cCCceEEeeccCCCCCCChHHHH
Q 002031 191 EAPKELDFNSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVI---Q------SSETVLILEFMDGIRLNDCESLE 261 (977)
Q Consensus 191 ~l~~Eld~~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~---~------~~~~vLVmE~i~G~~L~~~~~~~ 261 (977)
-|+.++.. +++. ++..| . ..+.+||||||.|+++.|+....
T Consensus 66 ------------ynil~~~~----------------~hpn--v~~fyg~~~k~~~~~~DqLWLVMEfC~gGSVTDLVKn~ 115 (953)
T KOG0587|consen 66 ------------YNMLKKYS----------------HHPN--VATFYGAFIKKDPGNGDQLWLVMEFCGGGSVTDLVKNT 115 (953)
T ss_pred ------------HHHHHhcc----------------CCCC--cceEEEEEEEecCCCCCeEEEEeeccCCccHHHHHhhh
Confidence 12222211 1111 22222 1 46679999999999999986532
Q ss_pred h-cCCCHHHHHHHHHHHH--HHHHHhcCccccCCCCCCeEEccCCCCceEEEecccccccCHHHHH
Q 002031 262 A-FGVNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSSSMKQ 324 (977)
Q Consensus 262 ~-~~~~~~~l~~~l~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~~~r~ 324 (977)
. ...+...++.++.+++ +.++|..-++|||+|-.|||++.+ +.++|+|||...+++....+
T Consensus 116 ~g~rl~E~~IaYI~re~lrgl~HLH~nkviHRDikG~NiLLT~e--~~VKLvDFGvSaQldsT~gr 179 (953)
T KOG0587|consen 116 KGNRLKEEWIAYILREILRGLAHLHNNKVIHRDIKGQNVLLTEN--AEVKLVDFGVSAQLDSTVGR 179 (953)
T ss_pred cccchhhHHHHHHHHHHHHHHHHHhhcceeeecccCceEEEecc--CcEEEeeeeeeeeeeccccc
Confidence 2 2234455677776666 677888999999999999999976 99999999999999876544
|
|
| >cd05105 PTKc_PDGFR_alpha Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor alpha | Back alignment and domain information |
|---|
Probab=99.14 E-value=2.3e-10 Score=132.75 Aligned_cols=39 Identities=18% Similarity=0.288 Sum_probs=34.9
Q ss_pred HHHHHhcCccccCCCCCCeEEccCCCCceEEEecccccccC
Q 002031 279 AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 319 (977)
Q Consensus 279 l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~ 319 (977)
+..+|..|++|+|+||.|||++.+ +.++|+|||++..+.
T Consensus 250 L~~LH~~~ivH~dikp~Nill~~~--~~~kL~DfGla~~~~ 288 (400)
T cd05105 250 MEFLASKNCVHRDLAARNVLLAQG--KIVKICDFGLARDIM 288 (400)
T ss_pred HHHHHhCCeeCCCCChHhEEEeCC--CEEEEEeCCcceecc
Confidence 778899999999999999999865 789999999987654
|
Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) alpha; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR alpha is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR alpha forms homodimers or heterodimers with PDGFR beta, depending on the nature of the PDGF ligand. PDGF-AA, PDGF- |
| >cd06645 STKc_MAP4K3 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3 | Back alignment and domain information |
|---|
Probab=99.14 E-value=1.5e-10 Score=126.11 Aligned_cols=139 Identities=14% Similarity=0.129 Sum_probs=92.5
Q ss_pred cccccccccEEEEEEe-cCCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCcHHHH
Q 002031 124 TPLATASIAQVHRATL-VDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (977)
Q Consensus 124 ~piasaSigqV~~A~l-~~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea 202 (977)
+.||+|++|+||+|+. .+++.||||+.+....... . .+.+|.
T Consensus 15 ~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~----~---------------------------------~~~~e~ 57 (267)
T cd06645 15 QRIGSGTYGDVYKARNVNTGELAAIKVIKLEPGEDF----A---------------------------------VVQQEI 57 (267)
T ss_pred HHhCCCCCeEEEEEEEcCCCcEEEEEEEecCchhHH----H---------------------------------HHHHHH
Confidence 5789999999999987 4799999998765422110 0 112233
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeee-cCCceEEeeccCCCCCCChHHHHhcCCCHHHHHHHHHHHH--H
Q 002031 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--A 279 (977)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~--l 279 (977)
..+..+.+ ..-+.+-..+. ....++||||++|.+|.++... ....+...+...+.+++ +
T Consensus 58 ~~~~~l~h-----------------~~ii~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~-~~~~~~~~~~~~~~~i~~~l 119 (267)
T cd06645 58 IMMKDCKH-----------------SNIVAYFGSYLRRDKLWICMEFCGGGSLQDIYHV-TGPLSESQIAYVSRETLQGL 119 (267)
T ss_pred HHHHhCCC-----------------CCeeeEEEEEEeCCEEEEEEeccCCCcHHHHHHh-cCCCCHHHHHHHHHHHHHHH
Confidence 32222211 01122222222 4556899999999999876432 22345555555544444 7
Q ss_pred HHHHhcCccccCCCCCCeEEccCCCCceEEEecccccccC
Q 002031 280 HQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 319 (977)
Q Consensus 280 ~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~ 319 (977)
..+|..|++|+|++|.||+++.+ +.++|+|||++..+.
T Consensus 120 ~~lH~~~i~H~dlkp~nili~~~--~~~~l~dfg~~~~~~ 157 (267)
T cd06645 120 YYLHSKGKMHRDIKGANILLTDN--GHVKLADFGVSAQIT 157 (267)
T ss_pred HHHHHCCeecCCCCHHHEEECCC--CCEEECcceeeeEcc
Confidence 78899999999999999999865 889999999987664
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated |
| >cd05087 PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases 1 and 3 | Back alignment and domain information |
|---|
Probab=99.14 E-value=1.9e-10 Score=125.65 Aligned_cols=136 Identities=16% Similarity=0.150 Sum_probs=88.3
Q ss_pred ccccccccEEEEEEec---CCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCcHHH
Q 002031 125 PLATASIAQVHRATLV---DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSE 201 (977)
Q Consensus 125 piasaSigqV~~A~l~---~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~E 201 (977)
.||+|++|.||+|+.. ++..||+|..+...... .+.++.+|
T Consensus 2 ~lg~G~~g~Vy~~~~~~~~~~~~~~~k~~~~~~~~~------------------------------------~~~~~~~E 45 (269)
T cd05087 2 EIGNGWFGKVILGEVNSGYTPAQVVVKELRVSASVQ------------------------------------EQMKFLEE 45 (269)
T ss_pred cccccCCceEEEEEEcCCCCceEEEEEecCCCCChH------------------------------------HHHHHHHH
Confidence 5899999999999864 34679999765432100 11234556
Q ss_pred HHHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeee----cCCceEEeeccCCCCCCChHHHHhc----CCCHHHHHHH
Q 002031 202 AENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ----SSETVLILEFMDGIRLNDCESLEAF----GVNKQKVVEE 273 (977)
Q Consensus 202 a~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~----~~~~vLVmE~i~G~~L~~~~~~~~~----~~~~~~l~~~ 273 (977)
...+.++.+ + .|.+++. ....++||||++|.+|.++...... ..+...+...
T Consensus 46 ~~~l~~l~h------------------~--~iv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~ 105 (269)
T cd05087 46 AQPYRSLQH------------------S--NLLQCLGQCTEVTPYLLVMEFCPLGDLKGYLRSCRKAELMTPDPTTLQRM 105 (269)
T ss_pred HHHHHhCCC------------------C--CEeeEEEEEcCCCCcEEEEECCCCCcHHHHHHHhhhcccccccHHHHHHH
Confidence 555554432 1 1223322 4557899999999999876432111 1222222233
Q ss_pred HHHHH--HHHHHhcCccccCCCCCCeEEccCCCCceEEEeccccccc
Q 002031 274 ITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKL 318 (977)
Q Consensus 274 l~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l 318 (977)
+.++. +..+|..|++|+|+||.||+++.+ +.++|+|||++...
T Consensus 106 ~~qi~~al~~lH~~~i~H~dlkp~nil~~~~--~~~kL~dfg~~~~~ 150 (269)
T cd05087 106 ACEIALGLLHLHKNNFIHSDLALRNCLLTAD--LTVKIGDYGLSHNK 150 (269)
T ss_pred HHHHHHHHHHHHHCCEeccccCcceEEEcCC--CcEEECCccccccc
Confidence 33332 678899999999999999999865 88999999998643
|
Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 1 (Aatyk1) and Aatyk3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk1 and Aatyk3 are members of the Aatyk subfamily of proteins. Aatyk3 is a receptor kinase containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 has a similar domain arrangement but without the transmembrane segment and is thus, a cytoplasmic (or nonreceptor) kinase. The expression of Aatyk1 (also referred simply as Aatyk) is upregulated during growth arrest and apoptosis in myeloid cells |
| >cd06643 STKc_SLK Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase | Back alignment and domain information |
|---|
Probab=99.14 E-value=2.5e-10 Score=125.71 Aligned_cols=140 Identities=16% Similarity=0.173 Sum_probs=93.1
Q ss_pred cccccccccEEEEEEec-CCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCcHHHH
Q 002031 124 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (977)
Q Consensus 124 ~piasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea 202 (977)
+.||.|++|.||+|... ++..|++|.......... . ++.+|+
T Consensus 11 ~~lg~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~----~---------------------------------~~~~e~ 53 (282)
T cd06643 11 GELGDGAFGKVYKAQNKETGVLAAAKVIDTKSEEEL----E---------------------------------DYMVEI 53 (282)
T ss_pred hhcccCCCeEEEEEEECCCCeEEEEEEeCCCCHHHH----H---------------------------------HHHHHH
Confidence 56999999999999975 688899998654322110 0 233444
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeee-cCCceEEeeccCCCCCCChHHHHhcCCCHHHHHHHHHHHH--H
Q 002031 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--A 279 (977)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~--l 279 (977)
..+..+.+ ..-+.+...+. ....++||||++|.++.+........++...+...+.+++ +
T Consensus 54 ~~l~~l~h-----------------~~ii~~~~~~~~~~~~~~v~e~~~~~~l~~~~~~~~~~l~~~~~~~~~~qi~~~L 116 (282)
T cd06643 54 DILASCDH-----------------PNIVKLLDAFYYENNLWILIEFCAGGAVDAVMLELERPLTEPQIRVVCKQTLEAL 116 (282)
T ss_pred HHHHHCCC-----------------CCeeeEEEEEeeCCEEEEEEEecCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHH
Confidence 44443321 11122222222 4567899999999988765322223455555555544444 7
Q ss_pred HHHHhcCccccCCCCCCeEEccCCCCceEEEecccccccC
Q 002031 280 HQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 319 (977)
Q Consensus 280 ~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~ 319 (977)
..+|..|++|+|++|.||+++.+ ++++|+|||++....
T Consensus 117 ~~LH~~~i~H~dlkp~nili~~~--~~~kl~dfg~~~~~~ 154 (282)
T cd06643 117 NYLHENKIIHRDLKAGNILFTLD--GDIKLADFGVSAKNT 154 (282)
T ss_pred HHHHHCCeeecCCCcccEEEccC--CCEEEcccccccccc
Confidence 88999999999999999999865 899999999987654
|
Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration. |
| >PTZ00283 serine/threonine protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.14 E-value=1.7e-10 Score=137.71 Aligned_cols=76 Identities=17% Similarity=0.227 Sum_probs=57.7
Q ss_pred ceEEeeccCCCCCCChHHHHh---cCCCHHHHHHHHHHHH--HHHHHhcCccccCCCCCCeEEccCCCCceEEEeccccc
Q 002031 242 TVLILEFMDGIRLNDCESLEA---FGVNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTK 316 (977)
Q Consensus 242 ~vLVmE~i~G~~L~~~~~~~~---~~~~~~~l~~~l~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~ 316 (977)
.++||||++|++|.+...... ..+....+...+.+++ +..+|..|++|||+||.|||++.+ +.++|+|||+++
T Consensus 114 i~lV~Ey~~~gsL~~~l~~~~~~~~~l~e~~~~~i~~qll~aL~~lH~~~IiHrDLKP~NILl~~~--~~vkL~DFGls~ 191 (496)
T PTZ00283 114 IALVLDYANAGDLRQEIKSRAKTNRTFREHEAGLLFIQVLLAVHHVHSKHMIHRDIKSANILLCSN--GLVKLGDFGFSK 191 (496)
T ss_pred EEEEEeCCCCCcHHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEEeCC--CCEEEEecccCe
Confidence 369999999999987643211 1244445555455544 788999999999999999999865 899999999987
Q ss_pred ccC
Q 002031 317 KLS 319 (977)
Q Consensus 317 ~l~ 319 (977)
.+.
T Consensus 192 ~~~ 194 (496)
T PTZ00283 192 MYA 194 (496)
T ss_pred ecc
Confidence 654
|
|
| >cd05097 PTKc_DDR_like Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=99.13 E-value=2e-10 Score=127.56 Aligned_cols=79 Identities=20% Similarity=0.234 Sum_probs=58.1
Q ss_pred cCCceEEeeccCCCCCCChHHHHh-----------cCCCHHHHHHHHHHHH--HHHHHhcCccccCCCCCCeEEccCCCC
Q 002031 239 SSETVLILEFMDGIRLNDCESLEA-----------FGVNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPH 305 (977)
Q Consensus 239 ~~~~vLVmE~i~G~~L~~~~~~~~-----------~~~~~~~l~~~l~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g 305 (977)
....++||||++|.+|.++..... ...+...+...+.++. +..+|..|++|+|+||+||+++.+ +
T Consensus 89 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~i~H~dlkp~Nill~~~--~ 166 (295)
T cd05097 89 DDPLCMITEYMENGDLNQFLSQREIESTFTHANNIPSVSIANLLYMAVQIASGMKYLASLNFVHRDLATRNCLVGNH--Y 166 (295)
T ss_pred CCccEEEEecCCCCcHHHHHHhccccccccccccCCcccHHHHHHHHHHHHHHHHHHHhcCeeccccChhhEEEcCC--C
Confidence 456789999999999987643211 0123334444444443 678899999999999999999865 7
Q ss_pred ceEEEecccccccC
Q 002031 306 RPILLDFGLTKKLS 319 (977)
Q Consensus 306 ~i~LiDFG~~~~l~ 319 (977)
.++|+|||++..+.
T Consensus 167 ~~kl~dfg~~~~~~ 180 (295)
T cd05097 167 TIKIADFGMSRNLY 180 (295)
T ss_pred cEEecccccccccc
Confidence 89999999987653
|
Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR)-like proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR-like proteins are members of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including |
| >cd05073 PTKc_Hck Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase | Back alignment and domain information |
|---|
Probab=99.13 E-value=2.3e-10 Score=124.33 Aligned_cols=140 Identities=21% Similarity=0.234 Sum_probs=94.3
Q ss_pred cccccccccEEEEEEecCCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCcHHHHH
Q 002031 124 TPLATASIAQVHRATLVDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEAE 203 (977)
Q Consensus 124 ~piasaSigqV~~A~l~~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea~ 203 (977)
+.||.|++|.||+|...++..||||+.+++-... -+|.+|++
T Consensus 12 ~~lg~g~~~~vy~~~~~~~~~~~iK~~~~~~~~~--------------------------------------~~~~~e~~ 53 (260)
T cd05073 12 KKLGAGQFGEVWMATYNKHTKVAVKTMKPGSMSV--------------------------------------EAFLAEAN 53 (260)
T ss_pred eEecCccceEEEEEEecCCccEEEEecCCChhHH--------------------------------------HHHHHHHH
Confidence 6799999999999998788889999876532100 02344555
Q ss_pred HHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeeecCCceEEeeccCCCCCCChHHHH-hcCCCHHHHHHHHHHHH--HH
Q 002031 204 NTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQSSETVLILEFMDGIRLNDCESLE-AFGVNKQKVVEEITRAY--AH 280 (977)
Q Consensus 204 n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~~~~~vLVmE~i~G~~L~~~~~~~-~~~~~~~~l~~~l~~~~--l~ 280 (977)
.+.++.+ ...+.+.........+++|||++|.+|.++.... ....+...+...+.++. +.
T Consensus 54 ~l~~l~~-----------------~~i~~~~~~~~~~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~aL~ 116 (260)
T cd05073 54 VMKTLQH-----------------DKLVKLHAVVTKEPIYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMA 116 (260)
T ss_pred HHHhcCC-----------------CCcceEEEEEcCCCeEEEEEeCCCCcHHHHHHhCCccccCHHHHHHHHHHHHHHHH
Confidence 4444322 1122333333345568999999999988764321 11233344444444433 67
Q ss_pred HHHhcCccccCCCCCCeEEccCCCCceEEEecccccccCH
Q 002031 281 QIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 320 (977)
Q Consensus 281 ~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 320 (977)
.+|..|++|+|++|.||+++.+ +.++|+|||.+..+..
T Consensus 117 ~lH~~~i~H~dl~p~ni~i~~~--~~~~l~d~~~~~~~~~ 154 (260)
T cd05073 117 FIEQRNYIHRDLRAANILVSAS--LVCKIADFGLARVIED 154 (260)
T ss_pred HHHhCCccccccCcceEEEcCC--CcEEECCCcceeeccC
Confidence 8899999999999999999855 8999999999877643
|
Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pa |
| >cd05057 PTKc_EGFR_like Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=99.13 E-value=3e-10 Score=124.86 Aligned_cols=141 Identities=20% Similarity=0.174 Sum_probs=96.5
Q ss_pred cccccccccEEEEEEec-CCC----EEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCc
Q 002031 124 TPLATASIAQVHRATLV-DGR----QVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDF 198 (977)
Q Consensus 124 ~piasaSigqV~~A~l~-~G~----~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~ 198 (977)
+.||+|++|+||+|+.+ +|+ .||+|+......... ...+
T Consensus 13 ~~ig~g~~g~v~~~~~~~~~~~~~~~~aik~~~~~~~~~~------------------------------------~~~~ 56 (279)
T cd05057 13 KVLGSGAFGTVYKGVWIPEGEKVKIPVAIKVLREETSPKA------------------------------------NKEI 56 (279)
T ss_pred ceecCCCCccEEEEEEecCCCCcceEEEEEeccCCCCHHH------------------------------------HHHH
Confidence 67999999999999974 444 589997654322100 0123
Q ss_pred HHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeeecCCceEEeeccCCCCCCChHHHHhcCCCHHHHHHHHHHHH
Q 002031 199 NSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQSSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY 278 (977)
Q Consensus 199 ~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~ 278 (977)
.+|+..+.++.+ ..-+.+.....+...++||||++|.+|.+.........+...+...+.++.
T Consensus 57 ~~e~~~l~~l~h-----------------~~i~~~~~~~~~~~~~~v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~qi~ 119 (279)
T cd05057 57 LDEAYVMASVDH-----------------PHVVRLLGICLSSQVQLITQLMPLGCLLDYVRNHKDNIGSQYLLNWCVQIA 119 (279)
T ss_pred HHHHHHHHhCCC-----------------CCcceEEEEEecCceEEEEecCCCCcHHHHHHhccCCCCHHHHHHHHHHHH
Confidence 455555555422 111222222235677899999999999876443333455666666555554
Q ss_pred --HHHHHhcCccccCCCCCCeEEccCCCCceEEEecccccccC
Q 002031 279 --AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 319 (977)
Q Consensus 279 --l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~ 319 (977)
+..+|..|++|+|+||.||+++.+ +.++|+|||++..+.
T Consensus 120 ~~l~~LH~~~i~H~di~p~nil~~~~--~~~kL~dfg~~~~~~ 160 (279)
T cd05057 120 KGMSYLEEKRLVHRDLAARNVLVKTP--QHVKITDFGLAKLLD 160 (279)
T ss_pred HHHHHHHhCCEEecccCcceEEEcCC--CeEEECCCccccccc
Confidence 788999999999999999999855 889999999998765
|
Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instea |
| >cd05581 STKc_PDK1 Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1 | Back alignment and domain information |
|---|
Probab=99.13 E-value=1.4e-10 Score=126.99 Aligned_cols=80 Identities=19% Similarity=0.232 Sum_probs=60.8
Q ss_pred cCCceEEeeccCCCCCCChHHHHhcCCCHHHHHHHHHHHH--HHHHHhcCccccCCCCCCeEEccCCCCceEEEeccccc
Q 002031 239 SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTK 316 (977)
Q Consensus 239 ~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~ 316 (977)
....++||||++|.+|.+... ....+....+...+.++. +..+|..|++|+|++|.||+++.+ +.++|+|||++.
T Consensus 74 ~~~~~lv~e~~~~~~L~~~l~-~~~~l~~~~~~~i~~ql~~~l~~Lh~~~~~H~dl~~~ni~i~~~--~~~~l~df~~~~ 150 (280)
T cd05581 74 EENLYFVLEYAPNGELLQYIR-KYGSLDEKCTRFYAAEILLALEYLHSKGIIHRDLKPENILLDKD--MHIKITDFGTAK 150 (280)
T ss_pred CceEEEEEcCCCCCcHHHHHH-HcCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCHHHeEECCC--CCEEecCCcccc
Confidence 345689999999999977643 222455555555444444 678999999999999999999865 899999999988
Q ss_pred ccCHH
Q 002031 317 KLSSS 321 (977)
Q Consensus 317 ~l~~~ 321 (977)
.+...
T Consensus 151 ~~~~~ 155 (280)
T cd05581 151 VLDPN 155 (280)
T ss_pred ccCCc
Confidence 77553
|
Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to auto |
| >cd06656 STKc_PAK3 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3 | Back alignment and domain information |
|---|
Probab=99.13 E-value=1.8e-10 Score=128.24 Aligned_cols=139 Identities=15% Similarity=0.151 Sum_probs=92.8
Q ss_pred cccccccccEEEEEEe-cCCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCcHHHH
Q 002031 124 TPLATASIAQVHRATL-VDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (977)
Q Consensus 124 ~piasaSigqV~~A~l-~~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea 202 (977)
+.||+|++|.||+|+. .+|+.||||.......... -.+.+|.
T Consensus 25 ~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~-------------------------------------~~~~~e~ 67 (297)
T cd06656 25 EKIGQGASGTVYTAIDIATGQEVAIKQMNLQQQPKK-------------------------------------ELIINEI 67 (297)
T ss_pred eeeccCCCeEEEEEEECCCCCEEEEEEEecCccchH-------------------------------------HHHHHHH
Confidence 5699999999999997 4899999997643211000 0123343
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeee-cCCceEEeeccCCCCCCChHHHHhcCCCHHHHHHHHHHHH--H
Q 002031 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--A 279 (977)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~--l 279 (977)
..+..+.+ ..-+.+...+. ....++||||++|.+|.++. .....+...+...+.+++ +
T Consensus 68 ~~l~~~~h-----------------~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~--~~~~~~~~~~~~~~~~l~~~L 128 (297)
T cd06656 68 LVMRENKN-----------------PNIVNYLDSYLVGDELWVVMEYLAGGSLTDVV--TETCMDEGQIAAVCRECLQAL 128 (297)
T ss_pred HHHHhCCC-----------------CCEeeEEEEEecCCEEEEeecccCCCCHHHHH--HhCCCCHHHHHHHHHHHHHHH
Confidence 33332211 01112222222 45678999999999998764 233445555555444443 7
Q ss_pred HHHHhcCccccCCCCCCeEEccCCCCceEEEecccccccCH
Q 002031 280 HQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 320 (977)
Q Consensus 280 ~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 320 (977)
..+|..|++|+|+||.|||++.+ +.++|+|||.+..+..
T Consensus 129 ~~LH~~~i~H~dL~p~Nili~~~--~~~~l~Dfg~~~~~~~ 167 (297)
T cd06656 129 DFLHSNQVIHRDIKSDNILLGMD--GSVKLTDFGFCAQITP 167 (297)
T ss_pred HHHHHCCcccCCCCHHHEEECCC--CCEEECcCccceEccC
Confidence 78899999999999999999865 8999999999877654
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding |
| >cd05061 PTKc_InsR Catalytic domain of the Protein Tyrosine Kinase, Insulin Receptor | Back alignment and domain information |
|---|
Probab=99.13 E-value=2.3e-10 Score=126.60 Aligned_cols=138 Identities=17% Similarity=0.205 Sum_probs=90.2
Q ss_pred cccccccccEEEEEEec------CCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccC
Q 002031 124 TPLATASIAQVHRATLV------DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELD 197 (977)
Q Consensus 124 ~piasaSigqV~~A~l~------~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld 197 (977)
+.||.|++|.||+|..+ .+..||||+........ .+.+
T Consensus 12 ~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~------------------------------------~~~~ 55 (288)
T cd05061 12 RELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLR------------------------------------ERIE 55 (288)
T ss_pred eeecCCCCcEEEEEEEeccCCCCcceEEEEEECCCcCCHH------------------------------------HHHH
Confidence 57999999999999753 25589999764321100 0112
Q ss_pred cHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceee---e-cCCceEEeeccCCCCCCChHHHHh---------cC
Q 002031 198 FNSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVI---Q-SSETVLILEFMDGIRLNDCESLEA---------FG 264 (977)
Q Consensus 198 ~~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~---~-~~~~vLVmE~i~G~~L~~~~~~~~---------~~ 264 (977)
+.+|...+.++.+ + .|++++ . ....++||||++|++|.+...... ..
T Consensus 56 ~~~e~~~l~~l~~------------------~--~i~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~ 115 (288)
T cd05061 56 FLNEASVMKGFTC------------------H--HVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPP 115 (288)
T ss_pred HHHHHHHHHhCCC------------------C--CeeeEEEEEcCCCCcEEEEeCCCCCCHHHHHHHhccccccCCCCCC
Confidence 3445454444421 1 233333 2 456799999999999988753211 01
Q ss_pred CCHHHHHHHHHHHH--HHHHHhcCccccCCCCCCeEEccCCCCceEEEecccccccC
Q 002031 265 VNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 319 (977)
Q Consensus 265 ~~~~~l~~~l~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~ 319 (977)
.....+...+.++. +..+|..|++|+|+||.||+++.+ +.++|+|||+++.+.
T Consensus 116 ~~~~~~~~~~~~l~~~l~~lH~~~i~H~dikp~nili~~~--~~~~L~Dfg~~~~~~ 170 (288)
T cd05061 116 PTLQEMIQMAAEIADGMAYLNAKKFVHRDLAARNCMVAHD--FTVKIGDFGMTRDIY 170 (288)
T ss_pred CCHHHHHHHHHHHHHHHHHHHhCCCcCCCCChheEEEcCC--CcEEECcCCcccccc
Confidence 12233334333333 678899999999999999999865 899999999987653
|
Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR is a receptor tyr kinase (RTK) that is composed of two alphabeta heterodimers. Binding of the insulin ligand to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR signaling plays an important role in many cellular processes including glucose homeostasis, glycogen synthesis, lipid and protein meta |
| >cd07863 STKc_CDK4 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4 | Back alignment and domain information |
|---|
Probab=99.13 E-value=1.7e-10 Score=127.34 Aligned_cols=75 Identities=21% Similarity=0.315 Sum_probs=55.0
Q ss_pred ceEEeeccCCCCCCChHHHH-hcCCCHHHHHHHHHHHH--HHHHHhcCccccCCCCCCeEEccCCCCceEEEeccccccc
Q 002031 242 TVLILEFMDGIRLNDCESLE-AFGVNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKL 318 (977)
Q Consensus 242 ~vLVmE~i~G~~L~~~~~~~-~~~~~~~~l~~~l~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l 318 (977)
.+++|||++| ++.++.... ..+++...+...+.+++ +..+|..|++|+|+||+||+++.+ +.++|+|||++..+
T Consensus 82 ~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~dikp~Nili~~~--~~~kl~dfg~~~~~ 158 (288)
T cd07863 82 VTLVFEHVDQ-DLRTYLDKVPPPGLPAETIKDLMRQFLRGLDFLHANCIVHRDLKPENILVTSG--GQVKLADFGLARIY 158 (288)
T ss_pred EEEEEccccc-CHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECCC--CCEEECccCccccc
Confidence 4799999986 454432211 12345555555555544 788999999999999999999865 89999999998765
Q ss_pred C
Q 002031 319 S 319 (977)
Q Consensus 319 ~ 319 (977)
+
T Consensus 159 ~ 159 (288)
T cd07863 159 S 159 (288)
T ss_pred c
Confidence 4
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitou |
| >cd00180 PKc Catalytic domain of Protein Kinases | Back alignment and domain information |
|---|
Probab=99.13 E-value=3e-10 Score=117.36 Aligned_cols=139 Identities=20% Similarity=0.275 Sum_probs=97.1
Q ss_pred cccccccEEEEEEec-CCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCcHHHHHH
Q 002031 126 LATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEAEN 204 (977)
Q Consensus 126 iasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea~n 204 (977)
|++|++|+||+++.. +|++++||+.++..... .+-.+.+|.+.
T Consensus 1 l~~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~~------------------------------------~~~~~~~e~~~ 44 (215)
T cd00180 1 LGEGGFGTVYLARDKKTGKKVAIKIIKKEDSSS------------------------------------LLEELLREIEI 44 (215)
T ss_pred CCcCCceEEEEEEecCCCcEEEEEEeccccchh------------------------------------HHHHHHHHHHH
Confidence 689999999999985 49999999987654321 00123344444
Q ss_pred HHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeee----cCCceEEeeccCCCCCCChHHHHhcCCCHHHHHHHHHHHH--
Q 002031 205 TRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ----SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY-- 278 (977)
Q Consensus 205 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~----~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~-- 278 (977)
+.++.+ ..++.++. ....+++|||++|.+|.++........+...+...+.++.
T Consensus 45 ~~~l~~--------------------~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~ 104 (215)
T cd00180 45 LKKLNH--------------------PNIVKLYGVFEDENHLYLVMEYCEGGSLKDLLKENEGKLSEDEILRILLQILEG 104 (215)
T ss_pred HHhcCC--------------------CCeeeEeeeeecCCeEEEEEecCCCCcHHHHHHhccCCCCHHHHHHHHHHHHHH
Confidence 444421 23444443 3567999999999998877442212455555555444443
Q ss_pred HHHHHhcCccccCCCCCCeEEccCCCCceEEEecccccccCHH
Q 002031 279 AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSSS 321 (977)
Q Consensus 279 l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~~ 321 (977)
+..+|..|++|+|++|+||+++.. +++++|+|||.+......
T Consensus 105 l~~lh~~~~~H~dl~~~ni~~~~~-~~~~~l~d~~~~~~~~~~ 146 (215)
T cd00180 105 LEYLHSNGIIHRDLKPENILLDSD-NGKVKLADFGLSKLLTSD 146 (215)
T ss_pred HHHHHhCCeeccCCCHhhEEEeCC-CCcEEEecCCceEEccCC
Confidence 788999999999999999999861 378999999999877654
|
Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which |
| >KOG0580 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=99.13 E-value=2e-11 Score=124.95 Aligned_cols=156 Identities=19% Similarity=0.200 Sum_probs=100.5
Q ss_pred ccC-ccccccccccEEEEEEe-cCCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccC
Q 002031 120 DFV-ETPLATASIAQVHRATL-VDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELD 197 (977)
Q Consensus 120 ~~d-~~piasaSigqV~~A~l-~~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld 197 (977)
+|| .+|+|.|-||+||.|+. +++--||+||.... ++ . ......++.+|+.
T Consensus 23 dfeigr~LgkgkFG~vYlarekks~~IvalKVlfKs---qi----~---------------------~~~v~~qlrREiE 74 (281)
T KOG0580|consen 23 DFEIGRPLGKGKFGNVYLAREKKSLFIVALKVLFKS---QI----L---------------------KTQVEHQLRREIE 74 (281)
T ss_pred hccccccccCCccccEeEeeeccCCcEEEEeeeeHH---HH----H---------------------HhcchhhhhheeE
Confidence 444 48999999999999997 57889999997421 11 0 0111223333332
Q ss_pred cHHHH--HHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeeecCCceEEeeccCCCCCCChHHH-HhcCCCHHH---HH
Q 002031 198 FNSEA--ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQSSETVLILEFMDGIRLNDCESL-EAFGVNKQK---VV 271 (977)
Q Consensus 198 ~~~Ea--~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~~~~~vLVmE~i~G~~L~~~~~~-~~~~~~~~~---l~ 271 (977)
...-. .|+-++...|.+ +.+-+|++||..++.+.....- ....++... ..
T Consensus 75 Iqs~L~hpnilrlY~~fhd------------------------~~riyLilEya~~gel~k~L~~~~~~~f~e~~~a~Yi 130 (281)
T KOG0580|consen 75 IQSHLRHPNILRLYGYFHD------------------------SKRIYLILEYAPRGELYKDLQEGRMKRFDEQRAATYI 130 (281)
T ss_pred eecccCCccHHhhhhheec------------------------cceeEEEEEecCCchHHHHHHhcccccccccchhHHH
Confidence 22111 255555554431 4455799999987776543221 112233333 33
Q ss_pred HHHHHHHHHHHHhcCccccCCCCCCeEEccCCCCceEEEecccccccCHHHHHHHHHHH
Q 002031 272 EEITRAYAHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSSSMKQALAKMF 330 (977)
Q Consensus 272 ~~l~~~~l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~~~r~~~~~l~ 330 (977)
..++.+ +...|..+++|||+||.|+|++.+ +.+++.|||-...-+...|..+|.-+
T Consensus 131 ~q~A~A-l~y~h~k~VIhRdiKpenlLlg~~--~~lkiAdfGwsV~~p~~kR~tlcgt~ 186 (281)
T KOG0580|consen 131 KQLANA-LLYCHLKRVIHRDIKPENLLLGSA--GELKIADFGWSVHAPSNKRKTLCGTL 186 (281)
T ss_pred HHHHHH-HHHhccCCcccCCCCHHHhccCCC--CCeeccCCCceeecCCCCceeeeccc
Confidence 333333 556789999999999999999965 89999999998887777777776544
|
|
| >cd05076 PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2 | Back alignment and domain information |
|---|
Probab=99.13 E-value=1.5e-10 Score=127.15 Aligned_cols=80 Identities=18% Similarity=0.140 Sum_probs=58.3
Q ss_pred cCCceEEeeccCCCCCCChHHHHhcCCCHHHHHHHHHHHH--HHHHHhcCccccCCCCCCeEEccCC-----CCceEEEe
Q 002031 239 SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDP-----PHRPILLD 311 (977)
Q Consensus 239 ~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~-----~g~i~LiD 311 (977)
....+|||||++|.+|.++.......++.......+.++. +..+|..|++|+|+||.||++++++ ...+++.|
T Consensus 88 ~~~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~dlkp~Nill~~~~~~~~~~~~~kl~d 167 (274)
T cd05076 88 GSENIMVEEFVEHGPLDVCLRKEKGRVPVAWKITVAQQLASALSYLEDKNLVHGNVCAKNILLARLGLAEGTSPFIKLSD 167 (274)
T ss_pred CCceEEEEecCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHcCCccCCCCCcccEEEeccCcccCccceeeecC
Confidence 4667999999999998776432233345555554444444 7889999999999999999997531 12489999
Q ss_pred ccccccc
Q 002031 312 FGLTKKL 318 (977)
Q Consensus 312 FG~~~~l 318 (977)
||+....
T Consensus 168 ~g~~~~~ 174 (274)
T cd05076 168 PGVSFTA 174 (274)
T ss_pred Ccccccc
Confidence 9987543
|
Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalyt |
| >cd07875 STKc_JNK1 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 1 | Back alignment and domain information |
|---|
Probab=99.13 E-value=2.7e-10 Score=130.57 Aligned_cols=73 Identities=21% Similarity=0.413 Sum_probs=53.3
Q ss_pred CceEEeeccCCCCCCChHHHHhcCCCHHHHHHHHHHHH--HHHHHhcCccccCCCCCCeEEccCCCCceEEEeccccccc
Q 002031 241 ETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKL 318 (977)
Q Consensus 241 ~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l 318 (977)
..++||||++|. +.+.. ....+...+...+.+++ +..+|..|++|||+||.|||++.+ +.++|+|||++...
T Consensus 103 ~~~lv~e~~~~~-l~~~~---~~~~~~~~~~~~~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~--~~~kL~DfG~a~~~ 176 (364)
T cd07875 103 DVYIVMELMDAN-LCQVI---QMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSD--CTLKILDFGLARTA 176 (364)
T ss_pred eEEEEEeCCCCC-HHHHH---HhcCCHHHHHHHHHHHHHHHHHHhhCCeecCCCCHHHEEECCC--CcEEEEeCCCcccc
Confidence 358999999873 33321 12344445444444443 788999999999999999999865 89999999998765
Q ss_pred C
Q 002031 319 S 319 (977)
Q Consensus 319 ~ 319 (977)
.
T Consensus 177 ~ 177 (364)
T cd07875 177 G 177 (364)
T ss_pred C
Confidence 3
|
Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 1 (JNK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn |
| >cd06917 STKc_NAK1_like Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.13 E-value=3.3e-10 Score=124.17 Aligned_cols=143 Identities=17% Similarity=0.165 Sum_probs=95.5
Q ss_pred cccccccccEEEEEEe-cCCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCcHHHH
Q 002031 124 TPLATASIAQVHRATL-VDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (977)
Q Consensus 124 ~piasaSigqV~~A~l-~~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea 202 (977)
+.||.|++|+||+|+. .+|+.||||+.+........ . ++.+|.
T Consensus 7 ~~l~~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~~--------------------------~----------~~~~e~ 50 (277)
T cd06917 7 ELIGRGAYGAVYRGKHVPTGRVVALKIINLDTPDDDV--------------------------S----------DIQREV 50 (277)
T ss_pred hheeccCCceEEEEEEcCCCcEEEEEEecCCCCchhH--------------------------H----------HHHHHH
Confidence 5799999999999997 58999999987643221100 0 123444
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCC-eEeceeee-cCCceEEeeccCCCCCCChHHHHhcCCCHHHHHHHHHHHH--
Q 002031 203 ENTRIVSANLGCKNKHEDSNKKPAYEVD-VLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY-- 278 (977)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~-v~vP~v~~-~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~-- 278 (977)
..+.++.. . .++. +.+...+. ....+|||||++|.+|.++.. ...++...+...+.++.
T Consensus 51 ~~l~~l~~-~--------------~~~~vi~~~~~~~~~~~~~lv~e~~~~~~L~~~~~--~~~l~~~~~~~i~~~i~~~ 113 (277)
T cd06917 51 ALLSQLRQ-S--------------QPPNITKYYGSYLKGPRLWIIMEYAEGGSVRTLMK--AGPIAEKYISVIIREVLVA 113 (277)
T ss_pred HHHHHhcc-C--------------CCCCeeeEeeeeeeCCEEEEEEecCCCCcHHHHHH--ccCCCHHHHHHHHHHHHHH
Confidence 45444432 0 0111 22222222 456789999999999987643 33445444444433333
Q ss_pred HHHHHhcCccccCCCCCCeEEccCCCCceEEEecccccccCHH
Q 002031 279 AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSSS 321 (977)
Q Consensus 279 l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~~ 321 (977)
+..+|..|++|+|++|.||+++.+ +.++|+|||.+..+...
T Consensus 114 l~~lh~~~i~H~dl~p~ni~i~~~--~~~~l~dfg~~~~~~~~ 154 (277)
T cd06917 114 LKYIHKVGVIHRDIKAANILVTNT--GNVKLCDFGVAALLNQN 154 (277)
T ss_pred HHHHHhCCcccCCcCHHHEEEcCC--CCEEEccCCceeecCCC
Confidence 678999999999999999999965 89999999998876543
|
Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of cent |
| >cd05116 PTKc_Syk Catalytic domain of the Protein Tyrosine Kinase, Spleen tyrosine kinase | Back alignment and domain information |
|---|
Probab=99.13 E-value=2.7e-10 Score=123.60 Aligned_cols=79 Identities=22% Similarity=0.292 Sum_probs=60.3
Q ss_pred cCCceEEeeccCCCCCCChHHHHhcCCCHHHHHHHHHHHH--HHHHHhcCccccCCCCCCeEEccCCCCceEEEeccccc
Q 002031 239 SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTK 316 (977)
Q Consensus 239 ~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~ 316 (977)
....++||||+++.+|.++... ...++...+...+.++. +..+|..|++|+|+||.||+++.+ +.++|+|||++.
T Consensus 67 ~~~~~lv~e~~~~~~L~~~l~~-~~~~~~~~~~~i~~qi~~al~~lH~~~i~H~dlkp~nill~~~--~~~kl~Dfg~~~ 143 (257)
T cd05116 67 AESWMLVMELAELGPLNKFLQK-NKHVTEKNITELVHQVSMGMKYLEETNFVHRDLAARNVLLVTQ--HYAKISDFGLSK 143 (257)
T ss_pred CCCcEEEEecCCCCcHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHCCEeecccchhhEEEcCC--CeEEECCCcccc
Confidence 3456899999999999876432 22345555555544444 788999999999999999999865 789999999987
Q ss_pred ccCH
Q 002031 317 KLSS 320 (977)
Q Consensus 317 ~l~~ 320 (977)
.+..
T Consensus 144 ~~~~ 147 (257)
T cd05116 144 ALGA 147 (257)
T ss_pred ccCC
Confidence 7643
|
Protein Tyrosine Kinase (PTK) family; Spleen tyrosine kinase (Syk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk, together with Zap-70, form the Syk subfamily of kinases which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Syk was first cloned from the spleen, and its function in hematopoietic cells is well-established. Syk is involved in the signaling downstream of activated receptors (including B-cell and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferatio |
| >cd05080 PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2 | Back alignment and domain information |
|---|
Probab=99.13 E-value=3.7e-10 Score=124.38 Aligned_cols=139 Identities=17% Similarity=0.156 Sum_probs=93.9
Q ss_pred cccccccccEEEEEEe-----cCCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCc
Q 002031 124 TPLATASIAQVHRATL-----VDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDF 198 (977)
Q Consensus 124 ~piasaSigqV~~A~l-----~~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~ 198 (977)
+.||.|++|+||.++. .+++.||||+.+....... +..|
T Consensus 10 ~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~~~~~------------------------------------~~~~ 53 (283)
T cd05080 10 RVLGEGHFGKVSLYCYDPANDGTGEMVAVKTLKRECGQQN------------------------------------TSGW 53 (283)
T ss_pred eecccCCCcEEEEeeEccccCCCCceEEEEEeccccChHH------------------------------------HHHH
Confidence 5699999999988653 3688999998765422110 0123
Q ss_pred HHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCC-eEeceeee---cCCceEEeeccCCCCCCChHHHHhcCCCHHHHHHHH
Q 002031 199 NSEAENTRIVSANLGCKNKHEDSNKKPAYEVD-VLIPEVIQ---SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEI 274 (977)
Q Consensus 199 ~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~-v~vP~v~~---~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l 274 (977)
.+|.+.+.++.+ +. +.+...+. ....+++|||++|.+|.+.. ....++...+...+
T Consensus 54 ~~E~~~l~~l~h------------------~~i~~~~~~~~~~~~~~~~lv~e~~~~~~l~~~~--~~~~l~~~~~~~i~ 113 (283)
T cd05080 54 KKEINILKTLYH------------------ENIVKYKGCCSEQGGKGLQLIMEYVPLGSLRDYL--PKHKLNLAQLLLFA 113 (283)
T ss_pred HHHHHHHHhCCC------------------CCEeeEEEEEecCCCceEEEEecCCCCCCHHHHH--HHcCCCHHHHHHHH
Confidence 445554444421 11 11111111 12357999999999998764 33456666666555
Q ss_pred HHHH--HHHHHhcCccccCCCCCCeEEccCCCCceEEEecccccccCH
Q 002031 275 TRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 320 (977)
Q Consensus 275 ~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 320 (977)
.+++ +..+|..|++|+|+||.||+++.+ +.++|+|||++..+..
T Consensus 114 ~~l~~~l~~lH~~~i~H~dlkp~Nili~~~--~~~~l~dfg~~~~~~~ 159 (283)
T cd05080 114 QQICEGMAYLHSQHYIHRDLAARNVLLDND--RLVKIGDFGLAKAVPE 159 (283)
T ss_pred HHHHHHHHHHHHCCeeccccChheEEEcCC--CcEEEeecccccccCC
Confidence 5544 788999999999999999999865 8899999999887653
|
Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of sign |
| >cd05580 STKc_PKA Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase | Back alignment and domain information |
|---|
Probab=99.13 E-value=2.7e-10 Score=126.12 Aligned_cols=144 Identities=17% Similarity=0.148 Sum_probs=95.9
Q ss_pred cccccccccEEEEEEec-CCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCcHHHH
Q 002031 124 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (977)
Q Consensus 124 ~piasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea 202 (977)
+.||+|++|.||+|... +++.||||+.++..... .. ..-.+.+|+
T Consensus 7 ~~ig~g~~~~vy~~~~~~~~~~~aiK~~~~~~~~~----~~------------------------------~~~~~~~e~ 52 (290)
T cd05580 7 KTLGTGSFGRVMLVRHKGSGKYYALKILSKAKIVK----LK------------------------------QVEHVLNEK 52 (290)
T ss_pred EEeecCCCeEEEEEEEcCCCCEEEEEEEEHHHhhh----hh------------------------------HHHHHHHHH
Confidence 57999999999999974 78999999875421100 00 001234455
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeee-cCCceEEeeccCCCCCCChHHHHhcCCCHHHHHHHHHHHH--H
Q 002031 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--A 279 (977)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~--l 279 (977)
+.+.++.+ ..-+.+...+. ....++||||++|.+|.+..... ..+....+...+.+++ +
T Consensus 53 ~~l~~l~h-----------------~~i~~~~~~~~~~~~~~~v~e~~~~~~L~~~~~~~-~~l~~~~~~~~~~qil~~l 114 (290)
T cd05580 53 RILQSIRH-----------------PFLVNLYGSFQDDSNLYLVMEYVPGGELFSHLRKS-GRFPEPVARFYAAQVVLAL 114 (290)
T ss_pred HHHHhCCC-----------------CCccceeeEEEcCCeEEEEEecCCCCCHHHHHHHc-CCCCHHHHHHHHHHHHHHH
Confidence 55554431 11122223333 45568999999999987764322 3345555544444433 6
Q ss_pred HHHHhcCccccCCCCCCeEEccCCCCceEEEecccccccCHH
Q 002031 280 HQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSSS 321 (977)
Q Consensus 280 ~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~~ 321 (977)
..+|..|++|+|+||.||+|+.+ +.++|+|||++..+...
T Consensus 115 ~~lH~~~i~H~dl~p~nili~~~--~~~kl~dfg~~~~~~~~ 154 (290)
T cd05580 115 EYLHSLDIVYRDLKPENLLLDSD--GYIKITDFGFAKRVKGR 154 (290)
T ss_pred HHHHHCCEecCCCCHHHEEECCC--CCEEEeeCCCccccCCC
Confidence 78899999999999999999865 89999999998876543
|
Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubi |
| >cd05606 STKc_beta_ARK Catalytic domain of the Protein Serine/Threonine Kinase, beta-adrenergic receptor kinase | Back alignment and domain information |
|---|
Probab=99.13 E-value=3.6e-10 Score=124.42 Aligned_cols=79 Identities=18% Similarity=0.174 Sum_probs=59.4
Q ss_pred cCCceEEeeccCCCCCCChHHHHhcCCCHHHHHHHHHHHH--HHHHHhcCccccCCCCCCeEEccCCCCceEEEeccccc
Q 002031 239 SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTK 316 (977)
Q Consensus 239 ~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~ 316 (977)
....++||||++|.+|.+... ....+....+...+.+++ +..+|..|++|+|++|.||+++.+ +.++|+|||++.
T Consensus 69 ~~~~~~v~e~~~g~~L~~~l~-~~~~l~~~~~~~~~~ql~~~l~~lH~~~i~H~di~p~nili~~~--~~~kl~dfg~~~ 145 (278)
T cd05606 69 PDKLSFILDLMNGGDLHYHLS-QHGVFSEAEMRFYAAEIILGLEHMHNRFVVYRDLKPANILLDEH--GHVRISDLGLAC 145 (278)
T ss_pred CCEEEEEEecCCCCcHHHHHH-hcCCCCHHHHHHHHHHHHHHHHHHHHCCEEcCCCCHHHEEECCC--CCEEEccCcCcc
Confidence 355689999999999876542 222345555555444443 678899999999999999999865 889999999987
Q ss_pred ccCH
Q 002031 317 KLSS 320 (977)
Q Consensus 317 ~l~~ 320 (977)
.+..
T Consensus 146 ~~~~ 149 (278)
T cd05606 146 DFSK 149 (278)
T ss_pred ccCc
Confidence 6643
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, beta-adrenergic receptor kinase (beta-ARK) group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. The beta-ARK group is co |
| >cd08529 STKc_FA2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains | Back alignment and domain information |
|---|
Probab=99.13 E-value=2.7e-10 Score=123.07 Aligned_cols=143 Identities=13% Similarity=0.119 Sum_probs=93.7
Q ss_pred cccccccccEEEEEEec-CCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCcHHHH
Q 002031 124 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (977)
Q Consensus 124 ~piasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea 202 (977)
+.|++|++|+||+|+.+ +|+.|++|......... .+ .-++.+|.
T Consensus 6 ~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~--~~---------------------------------~~~~~~e~ 50 (256)
T cd08529 6 NKIGKGSFGVVFKVVRKADKRVYAMKQIDLSKMNR--RE---------------------------------REEAIDEA 50 (256)
T ss_pred EEecCCCCeEEEEEEEcCCCcEEEEEEeehhhCCH--HH---------------------------------HHHHHHHH
Confidence 56999999999999974 78999999764321000 00 01233444
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeee-cCCceEEeeccCCCCCCChHHHH-hcCCCHHHHHHHHHHHH--
Q 002031 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLE-AFGVNKQKVVEEITRAY-- 278 (977)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLVmE~i~G~~L~~~~~~~-~~~~~~~~l~~~l~~~~-- 278 (977)
+.+.++++- .-+.+...+. ....++||||++|.+|.++.... ....+...+...+.++.
T Consensus 51 ~~l~~l~h~-----------------~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~~l~~a 113 (256)
T cd08529 51 RVLAKLDSS-----------------YIIRYYESFLDKGKLNIVMEYAENGDLHKLLKMQRGRPLPEDQVWRFFIQILLG 113 (256)
T ss_pred HHHHhcCCC-----------------CeehheeeeccCCEEEEEEEeCCCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHH
Confidence 444443220 0111111111 34568999999999998875432 22345555544444433
Q ss_pred HHHHHhcCccccCCCCCCeEEccCCCCceEEEecccccccCH
Q 002031 279 AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 320 (977)
Q Consensus 279 l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 320 (977)
+..+|..|++|+|+||.||+++.+ +.++|+|||++..+..
T Consensus 114 l~~lH~~~i~h~dl~~~nili~~~--~~~~l~df~~~~~~~~ 153 (256)
T cd08529 114 LAHLHSKKILHRDIKSLNLFLDAY--DNVKIGDLGVAKLLSD 153 (256)
T ss_pred HHHHHHCCcccCCCCcceEEEeCC--CCEEEcccccceeccC
Confidence 678899999999999999999865 8999999999887754
|
Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cyc |
| >PTZ00036 glycogen synthase kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.13 E-value=2.2e-10 Score=134.79 Aligned_cols=75 Identities=20% Similarity=0.221 Sum_probs=51.0
Q ss_pred eEEeeccCCCCCCChHH-H--HhcCCCHHHHHHHHHHHH--HHHHHhcCccccCCCCCCeEEccCCCCceEEEecccccc
Q 002031 243 VLILEFMDGIRLNDCES-L--EAFGVNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKK 317 (977)
Q Consensus 243 vLVmE~i~G~~L~~~~~-~--~~~~~~~~~l~~~l~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~ 317 (977)
++||||++| ++.+... . ....+....+...+.+++ +..+|..|++|||+||.|||++.+ ++.++|+|||+++.
T Consensus 143 ~lvmE~~~~-~l~~~~~~~~~~~~~l~~~~~~~~~~qi~~gL~yLH~~~IiHrDLKp~NILl~~~-~~~vkL~DFGla~~ 220 (440)
T PTZ00036 143 NVVMEFIPQ-TVHKYMKHYARNNHALPLFLVKLYSYQLCRALAYIHSKFICHRDLKPQNLLIDPN-THTLKLCDFGSAKN 220 (440)
T ss_pred EEEEecCCc-cHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCEecCCcCHHHEEEcCC-CCceeeeccccchh
Confidence 489999987 3433321 1 112233333333333333 788999999999999999999854 35799999999876
Q ss_pred cC
Q 002031 318 LS 319 (977)
Q Consensus 318 l~ 319 (977)
+.
T Consensus 221 ~~ 222 (440)
T PTZ00036 221 LL 222 (440)
T ss_pred cc
Confidence 54
|
|
| >cd06624 STKc_ASK Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase | Back alignment and domain information |
|---|
Probab=99.12 E-value=2.6e-10 Score=124.43 Aligned_cols=141 Identities=14% Similarity=0.076 Sum_probs=92.5
Q ss_pred cccccccccEEEEEEec-CCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCcHHHH
Q 002031 124 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (977)
Q Consensus 124 ~piasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea 202 (977)
..||.|++|.||+|+.+ +++.|+||.......... + .+.+|+
T Consensus 14 ~~lg~g~~g~v~~~~~~~~~~~v~~k~~~~~~~~~~----~---------------------------------~~~~e~ 56 (268)
T cd06624 14 VVLGKGTYGIVYAARDLSTQVRIAIKEIPERDSRYV----Q---------------------------------PLHEEI 56 (268)
T ss_pred EEEecCCceEEEEeEecCCCcEEEEEEecCCCHHHH----H---------------------------------HHHHHH
Confidence 57999999999999964 788999997654322110 0 233455
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeee-cCCceEEeeccCCCCCCChHHHHhcCC--CHHHHHHHHHHHH-
Q 002031 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAFGV--NKQKVVEEITRAY- 278 (977)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLVmE~i~G~~L~~~~~~~~~~~--~~~~l~~~l~~~~- 278 (977)
..+.++++ ..-+.+-.... ....+++|||++|.+|.+......... +...+...+.++.
T Consensus 57 ~~l~~l~h-----------------~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~ 119 (268)
T cd06624 57 ALHSYLKH-----------------RNIVQYLGSDSENGFFKIFMEQVPGGSLSALLRSKWGPLKDNEQTIIFYTKQILE 119 (268)
T ss_pred HHHHhcCC-----------------CCeeeeeeeeccCCEEEEEEecCCCCCHHHHHHHhcccCCCcHHHHHHHHHHHHH
Confidence 55444432 00111111111 345689999999999988754322222 4444444444433
Q ss_pred -HHHHHhcCccccCCCCCCeEEccCCCCceEEEecccccccC
Q 002031 279 -AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 319 (977)
Q Consensus 279 -l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~ 319 (977)
+..+|..|++|+|+||.||+++.+ ++.++|+|||++..+.
T Consensus 120 al~~lH~~~i~h~dl~p~nil~~~~-~~~~~l~dfg~~~~~~ 160 (268)
T cd06624 120 GLKYLHDNQIVHRDIKGDNVLVNTY-SGVVKISDFGTSKRLA 160 (268)
T ss_pred HHHHHHHCCEeecCCCHHHEEEcCC-CCeEEEecchhheecc
Confidence 778899999999999999999753 4789999999987653
|
Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kina |
| >cd05090 PTKc_Ror1 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1 | Back alignment and domain information |
|---|
Probab=99.12 E-value=3.1e-10 Score=124.97 Aligned_cols=141 Identities=13% Similarity=0.173 Sum_probs=91.6
Q ss_pred cccccccccEEEEEEe-----cCCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCc
Q 002031 124 TPLATASIAQVHRATL-----VDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDF 198 (977)
Q Consensus 124 ~piasaSigqV~~A~l-----~~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~ 198 (977)
+.||.|++|+||+|+. .+++.|+||..+....... .-++
T Consensus 11 ~~lg~g~~g~vy~~~~~~~~~~~~~~~~ik~~~~~~~~~~------------------------------------~~~~ 54 (283)
T cd05090 11 EELGECAFGKIYKGHLYLPGMDHAQLVAIKTLKDINNPQQ------------------------------------WGEF 54 (283)
T ss_pred eeccccCCcceEEEEEecCCCCCcceEEEEeccCCCCHHH------------------------------------HHHH
Confidence 5799999999999985 2568899997654221100 0023
Q ss_pred HHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeee-cCCceEEeeccCCCCCCChHHHHh---------------
Q 002031 199 NSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLEA--------------- 262 (977)
Q Consensus 199 ~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLVmE~i~G~~L~~~~~~~~--------------- 262 (977)
.+|+..+.++.+ ..-+.+...+. ....++||||++|.+|.++.....
T Consensus 55 ~~E~~~l~~l~h-----------------~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~ 117 (283)
T cd05090 55 QQEASLMAELHH-----------------PNIVCLLGVVTQEQPVCMLFEYLNQGDLHEFLIMRSPHSDVGCSSDEDGTV 117 (283)
T ss_pred HHHHHHHhhCCC-----------------CCeeeEEEEEecCCceEEEEEcCCCCcHHHHHHhcCCCCcccccccccccc
Confidence 445555444422 01122222222 455689999999999887643221
Q ss_pred -cCCCHHHHHHHHHHHH--HHHHHhcCccccCCCCCCeEEccCCCCceEEEecccccccC
Q 002031 263 -FGVNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 319 (977)
Q Consensus 263 -~~~~~~~l~~~l~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~ 319 (977)
..++...+...+.++. +..+|..|++|+|+||.|||++.+ +.++|+|||++..+.
T Consensus 118 ~~~~~~~~~~~i~~~i~~al~~lH~~~i~H~dlkp~nili~~~--~~~kl~dfg~~~~~~ 175 (283)
T cd05090 118 KSSLDHGDFLHIAIQIAAGMEYLSSHFFVHKDLAARNILIGEQ--LHVKISDLGLSREIY 175 (283)
T ss_pred ccccCHHHHHHHHHHHHHHHHHHHhcCeehhccccceEEEcCC--CcEEecccccccccc
Confidence 1123333444444433 788999999999999999999865 789999999988763
|
Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly |
| >cd05106 PTKc_CSF-1R Catalytic domain of the Protein Tyrosine Kinase, Colony-Stimulating Factor-1 Receptor | Back alignment and domain information |
|---|
Probab=99.12 E-value=2.7e-10 Score=131.18 Aligned_cols=50 Identities=14% Similarity=0.251 Sum_probs=39.8
Q ss_pred HHHHHHHHHHH--HHHHHhcCccccCCCCCCeEEccCCCCceEEEecccccccC
Q 002031 268 QKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 319 (977)
Q Consensus 268 ~~l~~~l~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~ 319 (977)
..+...+.++. +..+|..|++|||+||.|||++.+ +.++|+|||++..+.
T Consensus 212 ~~~~~i~~qi~~aL~yLH~~giiHrDLkp~Nil~~~~--~~~kL~DfGla~~~~ 263 (374)
T cd05106 212 DDLLRFSSQVAQGMDFLASKNCIHRDVAARNVLLTDG--RVAKICDFGLARDIM 263 (374)
T ss_pred HHHHHHHHHHHHHHHHHHHCCEEeccCchheEEEeCC--CeEEEeeceeeeecc
Confidence 33444444443 778999999999999999999855 789999999987664
|
Protein Tyrosine Kinase (PTK) family; Colony-Stimulating Factor-1 Receptor (CSF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CSF-1R, also called c-Fms, is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of CSF-1R to its ligand, CSF-1, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. CSF-1R signaling is criti |
| >PRK10345 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=99.12 E-value=4.1e-10 Score=118.27 Aligned_cols=140 Identities=14% Similarity=0.150 Sum_probs=87.3
Q ss_pred ccccccccccEEEEEEecCCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCcHHHH
Q 002031 123 ETPLATASIAQVHRATLVDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (977)
Q Consensus 123 ~~piasaSigqV~~A~l~~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea 202 (977)
.++||+|+++.||. .-.++.. +||+.+++-... +-++++|.
T Consensus 7 ~~~LG~G~~~~Vy~-hp~~~~k-~IKv~~~~~~~~-------------------------------------~~~~~rEi 47 (210)
T PRK10345 7 QSPLGTGRHRKCYA-HPEDAQR-CIKIVYHRGDGG-------------------------------------DKEIRREL 47 (210)
T ss_pred cceecCCCceEEEE-CCCCcCe-EEEEEeccccch-------------------------------------HHHHHHHH
Confidence 47899999999996 2235555 699887642110 00234555
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeee--cCC---ce---EEeec--cCCCCCCChHHHHhcCCCHH-HHH
Q 002031 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ--SSE---TV---LILEF--MDGIRLNDCESLEAFGVNKQ-KVV 271 (977)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~--~~~---~v---LVmE~--i~G~~L~~~~~~~~~~~~~~-~l~ 271 (977)
+.+..+.+.- .....|+++|. .++ .+ +|||| +.|.+|.++.. ...++.. ...
T Consensus 48 ~~l~~L~~~~---------------~~h~nIvr~yg~~et~~g~g~v~~~I~e~~G~~~~tL~~~l~--~~~~~e~~~~~ 110 (210)
T PRK10345 48 KYYAHLSRRL---------------IDWSGIPRYYGTVETDCGTGYVYDVIADFDGKPSITLTEFAE--QCRYEEDVAQL 110 (210)
T ss_pred HHHHHhhccC---------------CCCcccceeeEEEEeCCCCeEEEEEEecCCCCcchhHHHHHH--cccccHhHHHH
Confidence 5555553311 11334777764 222 12 78999 55788888753 2223322 234
Q ss_pred HHHHHHHHHHHHhcCccccCCCCCCeEEccC--CCCceEEEeccccccc
Q 002031 272 EEITRAYAHQIYVDGFFNGDPHPGNFLVSKD--PPHRPILLDFGLTKKL 318 (977)
Q Consensus 272 ~~l~~~~l~~i~~~G~~H~D~hPgNIlv~~~--~~g~i~LiDFG~~~~l 318 (977)
..++..+.+.+|.+||+|||+||.|||++.. ++++++|+||+-...+
T Consensus 111 ~~~L~~l~~yLh~~~IvhrDlKp~NILl~~~~~~~~~~~LiDg~G~~~~ 159 (210)
T PRK10345 111 RQLLKKLKRYLLDNRIVTMELKPQNILCQRISESEVIPVVCDNIGESTF 159 (210)
T ss_pred HHHHHHHHHHHHHCCEeecCCCHHHEEEeccCCCCCcEEEEECCCCcce
Confidence 4555566789999999999999999999853 2347999994444443
|
|
| >cd07868 STKc_CDK8 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 8 | Back alignment and domain information |
|---|
Probab=99.12 E-value=2.4e-10 Score=128.22 Aligned_cols=140 Identities=15% Similarity=0.190 Sum_probs=86.2
Q ss_pred CccccccccccEEEEEEec---CCCEEEEEEecCC-hhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccC
Q 002031 122 VETPLATASIAQVHRATLV---DGRQVVVKVQHQG-IKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELD 197 (977)
Q Consensus 122 d~~piasaSigqV~~A~l~---~G~~VAVKv~~p~-i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld 197 (977)
+...||.|++|.||+|+.+ +++.||||+.... ... +
T Consensus 5 ~~~~lG~G~~g~Vy~~~~~~~~~~~~~aiK~~~~~~~~~----------------------------------------~ 44 (317)
T cd07868 5 EGCKVGRGTYGHVYKAKRKDGKDDRDYALKQIEGTGISM----------------------------------------S 44 (317)
T ss_pred cccccccCCCeEEEEEEEccCCCCceEEEEEECCCCCcH----------------------------------------H
Confidence 3568999999999999964 5688999976432 111 1
Q ss_pred cHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeee---cCCceEEeeccCCCCCCChHHHHh--------cCCC
Q 002031 198 FNSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ---SSETVLILEFMDGIRLNDCESLEA--------FGVN 266 (977)
Q Consensus 198 ~~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~---~~~~vLVmE~i~G~~L~~~~~~~~--------~~~~ 266 (977)
+.+|++.+.++.+ ...+.+-..+. ....+++|||+++ .+.++..... ..+.
T Consensus 45 ~~~E~~~l~~l~h-----------------~niv~~~~~~~~~~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~l~ 106 (317)
T cd07868 45 ACREIALLRELKH-----------------PNVISLQKVFLSHADRKVWLLFDYAEH-DLWHIIKFHRASKANKKPVQLP 106 (317)
T ss_pred HHHHHHHHHhcCC-----------------CCCcceeeeEecCCCcEEEEEEeccCC-CHHHHHHhcccccccCCcccCC
Confidence 2234444444422 11122223332 2234799999976 4444322111 1133
Q ss_pred HHHHHHHHHHHH--HHHHHhcCccccCCCCCCeEEccC--CCCceEEEecccccccC
Q 002031 267 KQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKD--PPHRPILLDFGLTKKLS 319 (977)
Q Consensus 267 ~~~l~~~l~~~~--l~~i~~~G~~H~D~hPgNIlv~~~--~~g~i~LiDFG~~~~l~ 319 (977)
...+...+.+++ +..+|..|++|||+||.|||+..+ .++.++|+|||++..++
T Consensus 107 ~~~~~~i~~qi~~al~~LH~~~ivHrDlkp~Nil~~~~~~~~~~~kl~DfG~a~~~~ 163 (317)
T cd07868 107 RGMVKSLLYQILDGIHYLHANWVLHRDLKPANILVMGEGPERGRVKIADMGFARLFN 163 (317)
T ss_pred HHHHHHHHHHHHHHHHHHHhCCEEcCCCCHHHEEEecCCCCcCcEEEeecCceeccC
Confidence 333333333433 778899999999999999999532 24789999999987654
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK8 can act as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA p |
| >cd05613 STKc_MSK1_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 1 | Back alignment and domain information |
|---|
Probab=99.11 E-value=2.3e-10 Score=126.56 Aligned_cols=78 Identities=23% Similarity=0.276 Sum_probs=59.4
Q ss_pred CCceEEeeccCCCCCCChHHHHhcCCCHHHHHHHHHHHH--HHHHHhcCccccCCCCCCeEEccCCCCceEEEecccccc
Q 002031 240 SETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKK 317 (977)
Q Consensus 240 ~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~ 317 (977)
...++||||++|.+|.+.... ...+....+...+.++. +..+|..|++|+|++|.||+++.+ ++++|+|||++..
T Consensus 78 ~~~~lv~e~~~~~~L~~~l~~-~~~l~~~~~~~~~~qi~~al~~lH~~~i~H~dl~p~nil~~~~--~~~kl~dfg~~~~ 154 (290)
T cd05613 78 TKLHLILDYINGGELFTHLSQ-RERFKEQEVQIYSGEIVLALEHLHKLGIIYRDIKLENILLDSN--GHVVLTDFGLSKE 154 (290)
T ss_pred CeEEEEEecCCCCcHHHHHHH-cCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHeEECCC--CCEEEeeCcccee
Confidence 445799999999998776432 23345555554443443 788999999999999999999865 8999999999887
Q ss_pred cCH
Q 002031 318 LSS 320 (977)
Q Consensus 318 l~~ 320 (977)
+..
T Consensus 155 ~~~ 157 (290)
T cd05613 155 FHE 157 (290)
T ss_pred ccc
Confidence 654
|
Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK1, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph |
| >cd05056 PTKc_FAK Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase | Back alignment and domain information |
|---|
Probab=99.11 E-value=2.6e-10 Score=124.65 Aligned_cols=142 Identities=18% Similarity=0.150 Sum_probs=93.2
Q ss_pred cccccccccEEEEEEecC----CCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCcH
Q 002031 124 TPLATASIAQVHRATLVD----GRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFN 199 (977)
Q Consensus 124 ~piasaSigqV~~A~l~~----G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~ 199 (977)
+.||.|++|.||+|+..+ ...|+||+.+........ -.+.
T Consensus 12 ~~lg~g~~g~v~~~~~~~~~~~~~~v~ik~~~~~~~~~~~------------------------------------~~~~ 55 (270)
T cd05056 12 RCIGEGQFGDVYQGVYMSPENEKIAVAVKTCKNCTSPSVR------------------------------------EKFL 55 (270)
T ss_pred eeeCCccceeEEEEEEecCCCCCcceEEEecCCcCCHHHH------------------------------------HHHH
Confidence 679999999999998743 246899976543321100 0233
Q ss_pred HHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeeecCCceEEeeccCCCCCCChHHHHhcCCCHHHHHHHHHHHH-
Q 002031 200 SEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQSSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY- 278 (977)
Q Consensus 200 ~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~- 278 (977)
+|+..+.++.+ ...+.+..++.....++||||++|.+|.++........+...+...+.++.
T Consensus 56 ~e~~~l~~~~h-----------------~~i~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~l~~ 118 (270)
T cd05056 56 QEAYIMRQFDH-----------------PHIVKLIGVITENPVWIVMELAPLGELRSYLQVNKYSLDLASLILYSYQLST 118 (270)
T ss_pred HHHHHHHhCCC-----------------CchhceeEEEcCCCcEEEEEcCCCCcHHHHHHhCCCCCCHHHHHHHHHHHHH
Confidence 45444444321 011222222235567899999999999887543222345554444444433
Q ss_pred -HHHHHhcCccccCCCCCCeEEccCCCCceEEEecccccccCH
Q 002031 279 -AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 320 (977)
Q Consensus 279 -l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 320 (977)
+..+|..|++|+|++|.||+++.+ +.++|+|||++..+..
T Consensus 119 ~l~~lH~~~~~H~dl~p~nili~~~--~~~~l~d~g~~~~~~~ 159 (270)
T cd05056 119 ALAYLESKRFVHRDIAARNVLVSSP--DCVKLGDFGLSRYLED 159 (270)
T ss_pred HHHHHHhCCeeccccChheEEEecC--CCeEEccCceeeeccc
Confidence 678899999999999999999865 8899999999887654
|
Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions |
| >cd05049 PTKc_Trk Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases | Back alignment and domain information |
|---|
Probab=99.11 E-value=3.1e-10 Score=124.51 Aligned_cols=140 Identities=18% Similarity=0.176 Sum_probs=91.2
Q ss_pred cccccccccEEEEEEecC------CCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccC
Q 002031 124 TPLATASIAQVHRATLVD------GRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELD 197 (977)
Q Consensus 124 ~piasaSigqV~~A~l~~------G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld 197 (977)
+.||.|++|.||+|+..+ ++.||||+.+....... +-+
T Consensus 11 ~~lg~g~~~~v~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~------------------------------------~~~ 54 (280)
T cd05049 11 RELGEGAFGKVFLGECYHLEPENDKELVAVKTLKETASNDA------------------------------------RKD 54 (280)
T ss_pred hhccccCCceEeeeeeccccCcCCcceEEEEeecccCCHHH------------------------------------HHH
Confidence 569999999999998743 47899998654322110 013
Q ss_pred cHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeee-cCCceEEeeccCCCCCCChHHHHh-------------c
Q 002031 198 FNSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLEA-------------F 263 (977)
Q Consensus 198 ~~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLVmE~i~G~~L~~~~~~~~-------------~ 263 (977)
|.+|++.+.++.+. ..+.+...+. ....++||||++|.+|.+...... .
T Consensus 55 ~~~e~~~l~~l~~~-----------------~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~ 117 (280)
T cd05049 55 FEREAELLTNFQHE-----------------NIVKFYGVCTEGDPPIMVFEYMEHGDLNKFLRSHGPDAAFLKSPDSPMG 117 (280)
T ss_pred HHHHHHHHHhcCCC-----------------CchheeeEEecCCCeEEEEecCCCCCHHHHHHhcCCchhhhcccccccc
Confidence 44565555554320 0111222222 456799999999999987643211 1
Q ss_pred CCCHHHHHHHHHHHH--HHHHHhcCccccCCCCCCeEEccCCCCceEEEeccccccc
Q 002031 264 GVNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKL 318 (977)
Q Consensus 264 ~~~~~~l~~~l~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l 318 (977)
.+....+...+.++. +..+|..|++|+|++|+||+++.+ +.++|+|||++..+
T Consensus 118 ~l~~~~~~~~~~~i~~~l~~lH~~~i~h~dlkp~nili~~~--~~~kl~d~g~~~~~ 172 (280)
T cd05049 118 ELTLSQLLQIAVQIASGMVYLASQHFVHRDLATRNCLVGYD--LVVKIGDFGMSRDV 172 (280)
T ss_pred cccHHHHHHHHHHHHHHHHHHhhCCeeccccccceEEEcCC--CeEEECCcccceec
Confidence 122333333333333 678899999999999999999866 89999999998754
|
Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalyt |
| >KOG0612 consensus Rho-associated, coiled-coil containing protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.11 E-value=4.5e-11 Score=144.25 Aligned_cols=76 Identities=21% Similarity=0.267 Sum_probs=56.9
Q ss_pred CCceEEeeccCCCCCCChHHHHhcC-CCHHHHHHHHHHHH--HHHHHhcCccccCCCCCCeEEccCCCCceEEEeccccc
Q 002031 240 SETVLILEFMDGIRLNDCESLEAFG-VNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTK 316 (977)
Q Consensus 240 ~~~vLVmE~i~G~~L~~~~~~~~~~-~~~~~l~~~l~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~ 316 (977)
...||||||++|+.|-.+. ...+ ++....-..+.+++ +..||.-|+||||+||.|||++.. |.|+|.|||.|-
T Consensus 148 ~~LYlVMdY~pGGDlltLl--Sk~~~~pE~~ArFY~aEiVlAldslH~mgyVHRDiKPDNvLld~~--GHikLADFGsCl 223 (1317)
T KOG0612|consen 148 RYLYLVMDYMPGGDLLTLL--SKFDRLPEDWARFYTAEIVLALDSLHSMGYVHRDIKPDNVLLDKS--GHIKLADFGSCL 223 (1317)
T ss_pred cceEEEEecccCchHHHHH--hhcCCChHHHHHHHHHHHHHHHHHHHhccceeccCCcceeEeccc--CcEeeccchhHH
Confidence 3457999999999887663 3333 33322222333332 788999999999999999999976 999999999988
Q ss_pred ccC
Q 002031 317 KLS 319 (977)
Q Consensus 317 ~l~ 319 (977)
.+.
T Consensus 224 km~ 226 (1317)
T KOG0612|consen 224 KMD 226 (1317)
T ss_pred hcC
Confidence 775
|
|
| >cd06613 STKc_MAP4K3_like Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.11 E-value=3.4e-10 Score=122.68 Aligned_cols=141 Identities=16% Similarity=0.167 Sum_probs=95.0
Q ss_pred cccccccccEEEEEEec-CCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCcHHHH
Q 002031 124 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (977)
Q Consensus 124 ~piasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea 202 (977)
+.+|.|++|.||+|+.. +++.|++|+........ .. .+.+|.
T Consensus 9 ~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~----~~---------------------------------~~~~e~ 51 (262)
T cd06613 9 QRIGSGTYGDVYKARDIATGELVAIKVIKLEPGDD----FE---------------------------------IIQQEI 51 (262)
T ss_pred EEecCCCceEEEEeEecCCCCEEEEEEEEcCchhh----HH---------------------------------HHHHHH
Confidence 67999999999999974 68899999876432210 00 122333
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeee-cCCceEEeeccCCCCCCChHHHHhcCCCHHHHHHHHHHHH--H
Q 002031 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--A 279 (977)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~--l 279 (977)
..+.++.+ ...+.+...+. ....+++|||++|.+|.++.......++...+...+.+++ +
T Consensus 52 ~~l~~~~h-----------------~~i~~~~~~~~~~~~~~l~~e~~~~~~l~~~~~~~~~~l~~~~~~~~~~ql~~~l 114 (262)
T cd06613 52 SMLKECRH-----------------PNIVAYFGSYLRRDKLWIVMEYCGGGSLQDIYQVTRGPLSELQIAYVCRETLKGL 114 (262)
T ss_pred HHHHhCCC-----------------CChhceEEEEEeCCEEEEEEeCCCCCcHHHHHHhhccCCCHHHHHHHHHHHHHHH
Confidence 33333321 01112222222 4556899999999999887543334566655555555444 6
Q ss_pred HHHHhcCccccCCCCCCeEEccCCCCceEEEecccccccCH
Q 002031 280 HQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 320 (977)
Q Consensus 280 ~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 320 (977)
..+|..|++|+|++|.||+++.+ +.++|+|||++..+..
T Consensus 115 ~~lh~~~i~h~dl~p~ni~i~~~--~~~~l~d~g~~~~~~~ 153 (262)
T cd06613 115 AYLHETGKIHRDIKGANILLTED--GDVKLADFGVSAQLTA 153 (262)
T ss_pred HHHHhCCceecCCChhhEEECCC--CCEEECccccchhhhh
Confidence 78899999999999999999965 8899999999876653
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activ |
| >cd07853 STKc_NLK Catalytic domain of the Serine/Threonine Kinase, Nemo-Like Kinase | Back alignment and domain information |
|---|
Probab=99.11 E-value=1.6e-10 Score=133.04 Aligned_cols=75 Identities=21% Similarity=0.314 Sum_probs=53.4
Q ss_pred CceEEeeccCCCCCCChHHHHhcCCCHHHHHHHHHHHH--HHHHHhcCccccCCCCCCeEEccCCCCceEEEeccccccc
Q 002031 241 ETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKL 318 (977)
Q Consensus 241 ~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l 318 (977)
..++||||+.+ .|.+... ....++...+...+.+++ +..+|..|++|+|+||.|||++.+ +.++|+|||++...
T Consensus 78 ~~~lv~e~~~~-~l~~~~~-~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivH~dlkp~Nili~~~--~~~kL~Dfg~a~~~ 153 (372)
T cd07853 78 EIYVVTELMQS-DLHKIIV-SPQPLSSDHVKVFLYQILRGLKYLHSAGILHRDIKPGNLLVNSN--CVLKICDFGLARVE 153 (372)
T ss_pred eEEEEeecccc-CHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCChHHEEECCC--CCEEeccccceeec
Confidence 45899999975 3333211 122344444444444433 788999999999999999999865 89999999998754
Q ss_pred C
Q 002031 319 S 319 (977)
Q Consensus 319 ~ 319 (977)
.
T Consensus 154 ~ 154 (372)
T cd07853 154 E 154 (372)
T ss_pred c
Confidence 3
|
Serine/Threonine Kinases (STKs), Nemo-Like Kinase (NLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mitogen-activated protein kinases (MAPKs) are important mediators of cellular responses to extracellular signals. NLK is an atypical MAPK that is not regulated by a MAPK kinase. It functions downstream of the MAPK kinase kinase Tak1, which also plays a role in activating the JNK and p38 MAPKs. The Tak1/NLK pathways are regulated by Wnts, a family of secreted proteins that is critical in the control of asymmetric division and cell polarity. NLK can phosphorylate transcription |
| >cd07847 STKc_CDKL1_4 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4 | Back alignment and domain information |
|---|
Probab=99.11 E-value=2e-10 Score=126.33 Aligned_cols=142 Identities=20% Similarity=0.225 Sum_probs=94.2
Q ss_pred cccccccccEEEEEEec-CCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCcHHHH
Q 002031 124 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (977)
Q Consensus 124 ~piasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea 202 (977)
+.|++|++|+||+|+.+ +|+.||+|+......... .+-.+.+|+
T Consensus 7 ~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~-----------------------------------~~~~~~~e~ 51 (286)
T cd07847 7 SKIGEGSYGVVFKCRNRETGQIVAIKKFVESEDDPV-----------------------------------IKKIALREI 51 (286)
T ss_pred eeecccCCeEEEEEEECCCCcEEEEEEEeecccCcc-----------------------------------ccHHHHHHH
Confidence 46899999999999985 699999998643211000 000133444
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeee-cCCceEEeeccCCCCCCChHHHHhcCCCHHHHHHHHHHHH--H
Q 002031 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--A 279 (977)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~--l 279 (977)
..+.++.+ ..-+.+...+. ....++||||++|..+..+.. ....++...+...+.+++ +
T Consensus 52 ~~l~~~~h-----------------~~i~~~~~~~~~~~~~~~v~e~~~~~~l~~~~~-~~~~~~~~~~~~~~~ql~~~l 113 (286)
T cd07847 52 RMLKQLKH-----------------PNLVNLIEVFRRKRKLHLVFEYCDHTVLNELEK-NPRGVPEHLIKKIIWQTLQAV 113 (286)
T ss_pred HHHHhCCC-----------------CCEeeeeeEEeeCCEEEEEEeccCccHHHHHHh-CCCCCCHHHHHHHHHHHHHHH
Confidence 44444321 11122223333 445689999999987765532 122355555555555554 7
Q ss_pred HHHHhcCccccCCCCCCeEEccCCCCceEEEecccccccCH
Q 002031 280 HQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 320 (977)
Q Consensus 280 ~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 320 (977)
..+|..|++|+|+||.||+++.+ +.++|+|||++..+..
T Consensus 114 ~~LH~~~i~H~dl~p~nil~~~~--~~~~l~dfg~~~~~~~ 152 (286)
T cd07847 114 NFCHKHNCIHRDVKPENILITKQ--GQIKLCDFGFARILTG 152 (286)
T ss_pred HHHHHCCceecCCChhhEEEcCC--CcEEECccccceecCC
Confidence 78899999999999999999865 8999999999987754
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The functio |
| >cd07844 STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.11 E-value=2.2e-10 Score=126.58 Aligned_cols=139 Identities=19% Similarity=0.187 Sum_probs=92.0
Q ss_pred cccccccccEEEEEEec-CCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCcHHHH
Q 002031 124 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (977)
Q Consensus 124 ~piasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea 202 (977)
++||+|++|.||+|+.+ +|+.||||..+....... ...+.+|.
T Consensus 11 ~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~------------------------------------~~~~~~E~ 54 (291)
T cd07844 11 DKLGEGSYATVYKGRSKLTGQLVALKEIRLEHEEGA------------------------------------PFTAIREA 54 (291)
T ss_pred EEEeecCCeEEEEEEEcCCCcEEEEEEEecccccCC------------------------------------chhHHHHH
Confidence 68999999999999975 789999998754322100 00123455
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeee-cCCceEEeeccCCCCCCChHHHHhcCCCHHHHHHHHHHHH--H
Q 002031 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--A 279 (977)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~--l 279 (977)
..+.++.+ ..-+.+-.++. ....++||||++| +|.++.......++...+...+.+++ +
T Consensus 55 ~~l~~l~h-----------------~~i~~~~~~~~~~~~~~lv~e~~~~-~L~~~~~~~~~~~~~~~~~~~~~ql~~al 116 (291)
T cd07844 55 SLLKDLKH-----------------ANIVTLHDIIHTKKTLTLVFEYLDT-DLKQYMDDCGGGLSMHNVRLFLFQLLRGL 116 (291)
T ss_pred HHHhhCCC-----------------cceeeEEEEEecCCeEEEEEecCCC-CHHHHHHhCCCCCCHHHHHHHHHHHHHHH
Confidence 55544422 11122222322 3456899999987 66554322222345555555444444 7
Q ss_pred HHHHhcCccccCCCCCCeEEccCCCCceEEEeccccccc
Q 002031 280 HQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKL 318 (977)
Q Consensus 280 ~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l 318 (977)
..+|..|++|+|++|.||+++.+ +.++|+|||++...
T Consensus 117 ~~lH~~~i~H~dl~p~nil~~~~--~~~kl~dfg~~~~~ 153 (291)
T cd07844 117 AYCHQRRVLHRDLKPQNLLISER--GELKLADFGLARAK 153 (291)
T ss_pred HHHHhCCeecccCCHHHEEEcCC--CCEEECcccccccc
Confidence 88999999999999999999865 89999999998654
|
Serine/Threonine Kinases (STKs), PCTAIRE-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily share sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The association of PCTAIRE-like proteins with cyclins has not been widely studied, although PFTAIRE-1 has been shown to function as a CDK which is regulated by cyclin D3 as well as the |
| >cd05039 PTKc_Csk_like Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=99.11 E-value=3.7e-10 Score=122.31 Aligned_cols=139 Identities=19% Similarity=0.195 Sum_probs=92.9
Q ss_pred cccccccccEEEEEEecCCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCcHHHHH
Q 002031 124 TPLATASIAQVHRATLVDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEAE 203 (977)
Q Consensus 124 ~piasaSigqV~~A~l~~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea~ 203 (977)
+.+|.|++|.||+|.. .|+.||||..+.... . . + .+.+|..
T Consensus 12 ~~ig~g~~g~v~~~~~-~~~~v~iK~~~~~~~-~----~---~------------------------------~~~~e~~ 52 (256)
T cd05039 12 ATIGKGEFGDVMLGDY-RGQKVAVKCLKDDST-A----A---Q------------------------------AFLAEAS 52 (256)
T ss_pred eeeecCCCceEEEEEe-cCcEEEEEEeccchh-H----H---H------------------------------HHHHHHH
Confidence 6799999999999987 489999998754321 0 0 0 1233444
Q ss_pred HHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeee-cCCceEEeeccCCCCCCChHHHHhc-CCCHHHHHHHHHHHH--H
Q 002031 204 NTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAF-GVNKQKVVEEITRAY--A 279 (977)
Q Consensus 204 n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLVmE~i~G~~L~~~~~~~~~-~~~~~~l~~~l~~~~--l 279 (977)
.+.++.+ ..-+.+...+. ....++||||++|.+|.+....... ......+...+.+++ +
T Consensus 53 ~l~~l~~-----------------~~i~~~~~~~~~~~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l 115 (256)
T cd05039 53 VMTTLRH-----------------PNLVQLLGVVLQGNPLYIVTEYMAKGSLVDYLRSRGRAVITLAQQLGFALDVCEGM 115 (256)
T ss_pred HHHhcCC-----------------cceeeeEEEEcCCCCeEEEEEecCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHH
Confidence 4333321 01122222222 5667899999999999876432211 244444444444443 6
Q ss_pred HHHHhcCccccCCCCCCeEEccCCCCceEEEecccccccCH
Q 002031 280 HQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 320 (977)
Q Consensus 280 ~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 320 (977)
..+|..|++|+|+||+||+++.+ +.++|+|||.+.....
T Consensus 116 ~~lh~~~i~H~di~p~Nili~~~--~~~~l~d~g~~~~~~~ 154 (256)
T cd05039 116 EYLEEKNFVHRDLAARNVLVSED--LVAKVSDFGLAKEASQ 154 (256)
T ss_pred HHHHhCCccchhcccceEEEeCC--CCEEEccccccccccc
Confidence 78999999999999999999855 8999999999887743
|
Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk |
| >cd05077 PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Janus kinase 1 | Back alignment and domain information |
|---|
Probab=99.11 E-value=3.2e-10 Score=123.73 Aligned_cols=80 Identities=13% Similarity=0.078 Sum_probs=58.0
Q ss_pred cCCceEEeeccCCCCCCChHHHHhcCCCHHHHHHHHHHHH--HHHHHhcCccccCCCCCCeEEccCCC-----CceEEEe
Q 002031 239 SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPP-----HRPILLD 311 (977)
Q Consensus 239 ~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~-----g~i~LiD 311 (977)
....++||||++|.+|..+.......++...+...+.++. +..+|..|++|+|+||.|||++.++. ..++++|
T Consensus 76 ~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dlkp~Nill~~~~~~~~~~~~~~l~d 155 (262)
T cd05077 76 DVENIMVEEFVEFGPLDLFMHRKSDVLTTPWKFKVAKQLASALSYLEDKDLVHGNVCTKNILLAREGIDGECGPFIKLSD 155 (262)
T ss_pred CCCCEEEEecccCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhhhCCeECCCCCcccEEEecCCccCCCCceeEeCC
Confidence 4567999999999988766432222345555555444444 78889999999999999999975421 1389999
Q ss_pred ccccccc
Q 002031 312 FGLTKKL 318 (977)
Q Consensus 312 FG~~~~l 318 (977)
||++..+
T Consensus 156 ~g~~~~~ 162 (262)
T cd05077 156 PGIPITV 162 (262)
T ss_pred CCCCccc
Confidence 9987655
|
Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic dom |
| >cd06658 STKc_PAK5 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5 | Back alignment and domain information |
|---|
Probab=99.11 E-value=1.5e-10 Score=128.42 Aligned_cols=77 Identities=22% Similarity=0.361 Sum_probs=59.5
Q ss_pred cCCceEEeeccCCCCCCChHHHHhcCCCHHHHHHHHHHHH--HHHHHhcCccccCCCCCCeEEccCCCCceEEEeccccc
Q 002031 239 SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTK 316 (977)
Q Consensus 239 ~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~ 316 (977)
....++||||++|.+|.++. .....+...+...+.+++ +..+|..|++|+|++|.||+++.+ +.++|+|||++.
T Consensus 91 ~~~~~lv~e~~~~~~L~~~~--~~~~l~~~~~~~~~~qi~~~l~~LH~~~ivH~dlkp~Nill~~~--~~~kL~dfg~~~ 166 (292)
T cd06658 91 GDELWVVMEFLEGGALTDIV--THTRMNEEQIATVCLSVLRALSYLHNQGVIHRDIKSDSILLTSD--GRIKLSDFGFCA 166 (292)
T ss_pred CCeEEEEEeCCCCCcHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHHCCEeecCCCHHHEEEcCC--CCEEEccCcchh
Confidence 34568999999999887763 233345555555555544 788999999999999999999865 899999999886
Q ss_pred ccC
Q 002031 317 KLS 319 (977)
Q Consensus 317 ~l~ 319 (977)
.+.
T Consensus 167 ~~~ 169 (292)
T cd06658 167 QVS 169 (292)
T ss_pred hcc
Confidence 553
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly express |
| >cd06654 STKc_PAK1 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1 | Back alignment and domain information |
|---|
Probab=99.10 E-value=2.4e-10 Score=127.01 Aligned_cols=139 Identities=14% Similarity=0.162 Sum_probs=92.7
Q ss_pred cccccccccEEEEEEe-cCCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCcHHHH
Q 002031 124 TPLATASIAQVHRATL-VDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (977)
Q Consensus 124 ~piasaSigqV~~A~l-~~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea 202 (977)
+.+|.|++|.||+|+. .+|+.|+||......... .-.+.+|.
T Consensus 26 ~~lg~g~~~~v~~~~~~~~~~~v~ik~~~~~~~~~-------------------------------------~~~~~~e~ 68 (296)
T cd06654 26 EKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPK-------------------------------------KELIINEI 68 (296)
T ss_pred EEecCCCCeEEEEEEECCCCcEEEEEEEecCCcch-------------------------------------HHHHHHHH
Confidence 5699999999999996 478999999764321110 00123344
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeee-cCCceEEeeccCCCCCCChHHHHhcCCCHHHHHHHHHHHH--H
Q 002031 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--A 279 (977)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~--l 279 (977)
..+..+.+ ..-+.+...+. ....++||||++|.+|.++.. ....+...+...+.++. +
T Consensus 69 ~~l~~~~h-----------------~~v~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~--~~~~~~~~~~~i~~ql~~aL 129 (296)
T cd06654 69 LVMRENKN-----------------PNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVT--ETCMDEGQIAAVCRECLQAL 129 (296)
T ss_pred HHHHhCCC-----------------CCEeeEEEEEEeCCEEEEeecccCCCCHHHHHH--hcCCCHHHHHHHHHHHHHHH
Confidence 43333211 01112222222 456789999999999987642 33345555555444443 6
Q ss_pred HHHHhcCccccCCCCCCeEEccCCCCceEEEecccccccCH
Q 002031 280 HQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 320 (977)
Q Consensus 280 ~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 320 (977)
..+|..|++|+|++|.||+++.+ +.++|+|||++..+..
T Consensus 130 ~~LH~~gi~H~dLkp~Nill~~~--~~~kl~dfg~~~~~~~ 168 (296)
T cd06654 130 EFLHSNQVIHRDIKSDNILLGMD--GSVKLTDFGFCAQITP 168 (296)
T ss_pred HHHHHCCcccCCCCHHHEEEcCC--CCEEECccccchhccc
Confidence 78899999999999999999865 8899999999876644
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding |
| >cd08224 STKc_Nek6_Nek7 Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7 | Back alignment and domain information |
|---|
Probab=99.10 E-value=2.6e-10 Score=123.99 Aligned_cols=144 Identities=17% Similarity=0.135 Sum_probs=93.1
Q ss_pred cccccccccEEEEEEec-CCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCcHHHH
Q 002031 124 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (977)
Q Consensus 124 ~piasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea 202 (977)
+.||.|++|.||+|... +|+.||+|+.++..... .. ..-++.+|.
T Consensus 8 ~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~----~~------------------------------~~~~~~~ei 53 (267)
T cd08224 8 KKIGKGQFSVVYKAICLLDGRVVALKKVQIFEMMD----AK------------------------------ARQDCLKEI 53 (267)
T ss_pred eeeccCCceEEEEEEEcCCCCEEEEEEeecccccc----hh------------------------------hHHHHHHHH
Confidence 57999999999999986 89999999865311000 00 001233444
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeee-cCCceEEeeccCCCCCCChHHHH---hcCCCHHHHHHHHHHHH
Q 002031 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLE---AFGVNKQKVVEEITRAY 278 (977)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLVmE~i~G~~L~~~~~~~---~~~~~~~~l~~~l~~~~ 278 (977)
+.+.++.+ ..-+.+...+. ....++||||++|.+|.++.... ...+....+...+.+++
T Consensus 54 ~~l~~~~~-----------------~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~ 116 (267)
T cd08224 54 DLLKQLDH-----------------PNVIKYLASFIENNELNIVLELADAGDLSRMIKHFKKQKRLIPERTIWKYFVQLC 116 (267)
T ss_pred HHHHhCCC-----------------CCeeeeeeeeecCCeEEEEEecCCCCCHHHHHHHhcccCCCcCHHHHHHHHHHHH
Confidence 44333321 00112222222 34568999999999987764311 12234455555555544
Q ss_pred --HHHHHhcCccccCCCCCCeEEccCCCCceEEEecccccccCH
Q 002031 279 --AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 320 (977)
Q Consensus 279 --l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 320 (977)
+..+|..|++|+|++|.||+++.+ +.++|+|||++..+..
T Consensus 117 ~~l~~lh~~~i~h~dl~p~nil~~~~--~~~~l~d~~~~~~~~~ 158 (267)
T cd08224 117 SALEHMHSKRIMHRDIKPANVFITAT--GVVKLGDLGLGRFFSS 158 (267)
T ss_pred HHHHHHHhCCEecCCcChhhEEECCC--CcEEEeccceeeeccC
Confidence 678899999999999999999865 8899999999876643
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may a |
| >cd06605 PKc_MAPKK Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase | Back alignment and domain information |
|---|
Probab=99.10 E-value=2.6e-10 Score=123.92 Aligned_cols=143 Identities=17% Similarity=0.174 Sum_probs=93.8
Q ss_pred cccccccccEEEEEEec-CCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCcHHHH
Q 002031 124 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (977)
Q Consensus 124 ~piasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea 202 (977)
+.||.|++|.||+|..+ +++.|++|+.......... -.+.+|.
T Consensus 7 ~~ig~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~------------------------------------~~~~~e~ 50 (265)
T cd06605 7 GELGAGNSGVVSKVLHRPTGKIMAVKTIRLEINEAIQ------------------------------------KQILREL 50 (265)
T ss_pred HHhcCCCCeEEEEEEEcCCCcEEEEEEEecccChHHH------------------------------------HHHHHHH
Confidence 57999999999999985 7999999987654322110 0122333
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeee-cCCceEEeeccCCCCCCChHHHHhcCCCHHHHHHHHHHHH--H
Q 002031 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--A 279 (977)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~--l 279 (977)
..+.++.+ ..-+.+...+. ....+|+|||++|.+|.++.......++...+...+.+++ +
T Consensus 51 ~~l~~~~~-----------------~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l 113 (265)
T cd06605 51 DILHKCNS-----------------PYIVGFYGAFYNNGDISICMEYMDGGSLDKILKEVQGRIPERILGKIAVAVLKGL 113 (265)
T ss_pred HHHHHCCC-----------------CchhhhheeeecCCEEEEEEEecCCCcHHHHHHHccCCCCHHHHHHHHHHHHHHH
Confidence 33333211 00111111121 3556899999999999887543223344444444444443 6
Q ss_pred HHHHh-cCccccCCCCCCeEEccCCCCceEEEecccccccCHH
Q 002031 280 HQIYV-DGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSSS 321 (977)
Q Consensus 280 ~~i~~-~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~~ 321 (977)
..+|. .|++|+|+||+||+++.+ +.++|+|||.+..+...
T Consensus 114 ~~lH~~~~i~H~dl~~~ni~~~~~--~~~~l~d~g~~~~~~~~ 154 (265)
T cd06605 114 TYLHEKHKIIHRDVKPSNILVNSR--GQIKLCDFGVSGQLVNS 154 (265)
T ss_pred HHHcCCCCeecCCCCHHHEEECCC--CCEEEeecccchhhHHH
Confidence 78899 999999999999999965 88999999998776543
|
Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity |
| >cd05577 STKc_GRK Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase | Back alignment and domain information |
|---|
Probab=99.10 E-value=2.7e-10 Score=125.12 Aligned_cols=141 Identities=16% Similarity=0.148 Sum_probs=92.0
Q ss_pred cccccccEEEEEEe-cCCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCcHHHHHH
Q 002031 126 LATASIAQVHRATL-VDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEAEN 204 (977)
Q Consensus 126 iasaSigqV~~A~l-~~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea~n 204 (977)
||.|++|.||+|.. .+|+.||||+......... ..+..+..|.+.
T Consensus 1 lg~g~~g~vy~~~~~~~~~~~~ik~~~~~~~~~~----------------------------------~~~~~~~~e~~~ 46 (277)
T cd05577 1 LGKGGFGEVCACQVKATGKMYACKKLDKKRLKKR----------------------------------KGEQMALNEKKI 46 (277)
T ss_pred CCCCCceeEEEEEEcCCCcEEEEEEEehhhhhhh----------------------------------hhhHHHHHHHHH
Confidence 58999999999986 4799999998754221100 011123345555
Q ss_pred HHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeee-cCCceEEeeccCCCCCCChHHHHh-cCCCHHHHHHHHHHHH--HH
Q 002031 205 TRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLEA-FGVNKQKVVEEITRAY--AH 280 (977)
Q Consensus 205 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLVmE~i~G~~L~~~~~~~~-~~~~~~~l~~~l~~~~--l~ 280 (977)
+.++++ ..-+.+...+. ....+|||||++|.+|.+...... ..+....+...+.+++ +.
T Consensus 47 l~~l~~-----------------~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~ql~~~l~ 109 (277)
T cd05577 47 LEKVSS-----------------RFIVSLAYAFETKDDLCLVMTLMNGGDLKYHIYNVGEPGFPEARAIFYAAQIICGLE 109 (277)
T ss_pred HHhCCC-----------------CCEeeeeeEEecCCeEEEEEecCCCCcHHHHHHHcCcCCCCHHHHHHHHHHHHHHHH
Confidence 544421 11122222332 355789999999999987643222 1345555444444433 67
Q ss_pred HHHhcCccccCCCCCCeEEccCCCCceEEEecccccccC
Q 002031 281 QIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 319 (977)
Q Consensus 281 ~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~ 319 (977)
.+|..|++|+|++|.||+++.+ +.++|+|||.+..+.
T Consensus 110 ~lH~~~i~H~di~p~Nil~~~~--~~~~l~dfg~~~~~~ 146 (277)
T cd05577 110 HLHQRRIVYRDLKPENVLLDDH--GNVRISDLGLAVELK 146 (277)
T ss_pred HHHhCCcccCCCCHHHEEECCC--CCEEEccCcchhhhc
Confidence 8899999999999999999865 899999999876653
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of |
| >COG3642 Mn2+-dependent serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.10 E-value=1.8e-09 Score=107.82 Aligned_cols=138 Identities=20% Similarity=0.286 Sum_probs=94.9
Q ss_pred cccccccccEEEEEEecCCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCcHHHHH
Q 002031 124 TPLATASIAQVHRATLVDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEAE 203 (977)
Q Consensus 124 ~piasaSigqV~~A~l~~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea~ 203 (977)
.+++.|.-+.++.+.. -|.++++|..-|.- |..+.+=+.++. -.-++||+
T Consensus 2 ~~i~~GAEa~i~~~~~-~g~~av~K~Ri~K~------------------------YR~p~LD~klrr-----~Rt~~Ear 51 (204)
T COG3642 2 DLIKQGAEAIIYLTDF-LGLPAVVKERIPKR------------------------YRHPELDEKLRR-----ERTRREAR 51 (204)
T ss_pred chhhCCcceeEEeeec-cCcceEEEeecCcc------------------------cCChHHHHHHHH-----HHHHHHHH
Confidence 3578888889999865 36679999764432 111111111111 13467899
Q ss_pred HHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeee--cCCceEEeeccCCCCCCChHHHHhcCCCHHHHHHHHHHHHHHH
Q 002031 204 NTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ--SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAYAHQ 281 (977)
Q Consensus 204 n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~--~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~l~~ 281 (977)
.+.+++. .+|.+|.+|. .....|||||++|..|.+... .. ...+.+.+-.. +.-
T Consensus 52 il~~a~~------------------~GV~~P~v~dvD~~~~~I~me~I~G~~lkd~l~--~~---~~~~~r~vG~~-vg~ 107 (204)
T COG3642 52 ILAKARE------------------AGVPVPIVYDVDPDNGLIVMEYIEGELLKDALE--EA---RPDLLREVGRL-VGK 107 (204)
T ss_pred HHHHHHH------------------cCCCCCeEEEEcCCCCEEEEEEeCChhHHHHHH--hc---chHHHHHHHHH-HHH
Confidence 9888765 2688999997 566689999999999887632 21 12334433333 456
Q ss_pred HHhcCccccCCCCCCeEEccCCCCceEEEeccccccc
Q 002031 282 IYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKL 318 (977)
Q Consensus 282 i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l 318 (977)
+|..||+|+||-+.||++.. +++.+||||+...-
T Consensus 108 lH~~givHGDLTtsNiIl~~---~~i~~IDfGLg~~s 141 (204)
T COG3642 108 LHKAGIVHGDLTTSNIILSG---GRIYFIDFGLGEFS 141 (204)
T ss_pred HHhcCeecCCCccceEEEeC---CcEEEEECCccccc
Confidence 79999999999999999973 46999999997643
|
|
| >cd06627 STKc_Cdc7_like Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.10 E-value=4e-10 Score=121.29 Aligned_cols=144 Identities=19% Similarity=0.151 Sum_probs=95.6
Q ss_pred cccccccccEEEEEEec-CCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCcHHHH
Q 002031 124 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (977)
Q Consensus 124 ~piasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea 202 (977)
++||+|++|.||+|+.+ +|+.|+||........ ..+. + ++.+|+
T Consensus 6 ~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~--~~~~-----------------------~----------~~~~e~ 50 (254)
T cd06627 6 DLIGRGAFGVVYKGLNLETGDFVAIKQISLEKIK--EEAL-----------------------K----------SIMQEI 50 (254)
T ss_pred eEEcccCCeEEEEEEEcCCCcEEEEEEecccccC--HHHH-----------------------H----------HHHHHH
Confidence 68999999999999875 7899999987643211 0000 0 233444
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeee-cCCceEEeeccCCCCCCChHHHHhcCCCHHHHHHHHHHHH--H
Q 002031 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--A 279 (977)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~--l 279 (977)
+.+.++++ ...+.+..... ....+++|||++|.+|.++.... ...+...+...+.+++ +
T Consensus 51 ~~l~~l~~-----------------~~i~~~~~~~~~~~~~~~v~e~~~~~~L~~~~~~~-~~l~~~~~~~~~~~i~~~l 112 (254)
T cd06627 51 DLLKNLKH-----------------PNIVKYIGSIETSDSLYIILEYAENGSLRQIIKKF-GPFPESLVAVYVYQVLQGL 112 (254)
T ss_pred HHHHhCCC-----------------CCccEEEEEEEeCCEEEEEEecCCCCcHHHHHHhc-cCCCHHHHHHHHHHHHHHH
Confidence 44444321 00112222222 45568999999999988764322 3345555444444444 6
Q ss_pred HHHHhcCccccCCCCCCeEEccCCCCceEEEecccccccCHHH
Q 002031 280 HQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSSSM 322 (977)
Q Consensus 280 ~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~~~ 322 (977)
..+|..|++|+|++|+||+++.+ +.++|+|||.+..+....
T Consensus 113 ~~lH~~~i~H~dl~p~ni~i~~~--~~~~l~d~~~~~~~~~~~ 153 (254)
T cd06627 113 AYLHEQGVIHRDIKAANILTTKD--GVVKLADFGVATKLNDVS 153 (254)
T ss_pred HHHhhCCcccCCCCHHHEEECCC--CCEEEeccccceecCCCc
Confidence 78999999999999999999864 899999999998876543
|
Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast |
| >cd05075 PTKc_Axl Catalytic domain of the Protein Tyrosine Kinase, Axl | Back alignment and domain information |
|---|
Probab=99.10 E-value=4.4e-10 Score=122.79 Aligned_cols=78 Identities=23% Similarity=0.286 Sum_probs=57.9
Q ss_pred CceEEeeccCCCCCCChHHHHh-----cCCCHHHHHHHHHHHH--HHHHHhcCccccCCCCCCeEEccCCCCceEEEecc
Q 002031 241 ETVLILEFMDGIRLNDCESLEA-----FGVNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFG 313 (977)
Q Consensus 241 ~~vLVmE~i~G~~L~~~~~~~~-----~~~~~~~l~~~l~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG 313 (977)
..+++|||++|.+|.+...... ..++...+...+.++. +..+|..|++|+|+||.|||++.+ +.++|+|||
T Consensus 80 ~~~~v~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~Nil~~~~--~~~kl~Dfg 157 (272)
T cd05075 80 SPVVILPFMKHGDLHSFLLYSRLGDCPQYLPTQMLVKFMTDIASGMEYLSSKSFIHRDLAARNCMLNEN--MNVCVADFG 157 (272)
T ss_pred CcEEEEEeCCCCcHHHHHHHhcccCCcccCCHHHHHHHHHHHHHHHHHHHHCCeeccccchhheEEcCC--CCEEECCCC
Confidence 4589999999998876643221 1234444444444443 788999999999999999999865 889999999
Q ss_pred cccccCH
Q 002031 314 LTKKLSS 320 (977)
Q Consensus 314 ~~~~l~~ 320 (977)
++..+..
T Consensus 158 ~~~~~~~ 164 (272)
T cd05075 158 LSKKIYN 164 (272)
T ss_pred cccccCc
Confidence 9887643
|
Protein Tyrosine Kinase (PTK) family; Axl; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl is widely expressed in a variety of organs and cells including epithelial, mesenchymal, hematopoietic, as well as non-transfor |
| >cd06659 STKc_PAK6 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6 | Back alignment and domain information |
|---|
Probab=99.10 E-value=3.2e-10 Score=126.16 Aligned_cols=78 Identities=22% Similarity=0.356 Sum_probs=59.5
Q ss_pred cCCceEEeeccCCCCCCChHHHHhcCCCHHHHHHHHHHHH--HHHHHhcCccccCCCCCCeEEccCCCCceEEEeccccc
Q 002031 239 SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTK 316 (977)
Q Consensus 239 ~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~ 316 (977)
....+++|||++|.+|.+.. ....++...+...+.+++ +..+|..|++|+|++|+||+++.+ +.++|+|||++.
T Consensus 90 ~~~~~iv~e~~~~~~L~~~~--~~~~~~~~~~~~~~~qi~~~L~~LH~~~ivH~dl~p~Nill~~~--~~~kL~dfg~~~ 165 (297)
T cd06659 90 GEELWVLMEFLQGGALTDIV--SQTRLNEEQIATVCESVLQALCYLHSQGVIHRDIKSDSILLTLD--GRVKLSDFGFCA 165 (297)
T ss_pred CCeEEEEEecCCCCCHHHHH--hhcCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHeEEccC--CcEEEeechhHh
Confidence 35568999999999887653 233445555555444444 778899999999999999999865 899999999987
Q ss_pred ccCH
Q 002031 317 KLSS 320 (977)
Q Consensus 317 ~l~~ 320 (977)
.+..
T Consensus 166 ~~~~ 169 (297)
T cd06659 166 QISK 169 (297)
T ss_pred hccc
Confidence 6543
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role i |
| >cd06632 STKc_MEKK1_plant Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1 | Back alignment and domain information |
|---|
Probab=99.10 E-value=3.6e-10 Score=122.09 Aligned_cols=146 Identities=15% Similarity=0.089 Sum_probs=91.9
Q ss_pred ccccccccccEEEEEEec-CCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCcHHH
Q 002031 123 ETPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSE 201 (977)
Q Consensus 123 ~~piasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~E 201 (977)
.+.||+|++|+||+|+.+ +|+.|+||+...........+ ..+ .+.+|
T Consensus 5 ~~~ig~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~----------------------~~~----------~~~~e 52 (258)
T cd06632 5 GELLGSGSFGSVYEGLNLDDGDFFAVKEVSLADDGQTGQE----------------------AVK----------QLEQE 52 (258)
T ss_pred cceeeecCCceEEEEEEcCCCcEEEEEEEEEccccccchH----------------------HHH----------HHHHH
Confidence 467999999999999986 899999998754221100000 000 12233
Q ss_pred HHHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeee-cCCceEEeeccCCCCCCChHHHHhcCCCHHHHHHHHHHHH--
Q 002031 202 AENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY-- 278 (977)
Q Consensus 202 a~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~-- 278 (977)
..-+.++.+ ..-+.+..... ....+++|||++|.+|.++... ....+...+...+.+++
T Consensus 53 ~~~l~~~~h-----------------~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~-~~~~~~~~~~~~~~~i~~~ 114 (258)
T cd06632 53 IALLSKLQH-----------------PNIVQYLGTEREEDNLYIFLELVPGGSLAKLLKK-YGSFPEPVIRLYTRQILLG 114 (258)
T ss_pred HHHHHhcCC-----------------CCchheeeeEecCCeEEEEEEecCCCcHHHHHHh-cCCCCHHHHHHHHHHHHHH
Confidence 333333321 00111222222 3456899999999998876432 12244444433333333
Q ss_pred HHHHHhcCccccCCCCCCeEEccCCCCceEEEecccccccCH
Q 002031 279 AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 320 (977)
Q Consensus 279 l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 320 (977)
+..+|..|++|+|++|.||+++.+ +.++|+|||++..+..
T Consensus 115 l~~lH~~~i~H~dl~~~ni~~~~~--~~~kl~d~~~~~~~~~ 154 (258)
T cd06632 115 LEYLHDRNTVHRDIKGANILVDTN--GVVKLADFGMAKQVVE 154 (258)
T ss_pred HHHHHHCCcccCCCCHHHEEECCC--CCEEEccCccceeccc
Confidence 678899999999999999999865 8999999999877644
|
Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidops |
| >cd05038 PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases | Back alignment and domain information |
|---|
Probab=99.10 E-value=3.5e-10 Score=124.15 Aligned_cols=138 Identities=21% Similarity=0.224 Sum_probs=93.8
Q ss_pred cccccccccEEEEEEec-----CCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCc
Q 002031 124 TPLATASIAQVHRATLV-----DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDF 198 (977)
Q Consensus 124 ~piasaSigqV~~A~l~-----~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~ 198 (977)
+.||.|++|.||+|+.. +++.||||+.++...... +-+|
T Consensus 10 ~~ig~g~~~~v~~~~~~~~~~~~~~~~avK~~~~~~~~~~------------------------------------~~~~ 53 (284)
T cd05038 10 KQLGEGHFGKVELCRYDPLGDNTGEQVAVKSLNHSGEEQH------------------------------------RSDF 53 (284)
T ss_pred eeeccCCCeeEEEeeecCCCCCCceEEEEEEeccccchHH------------------------------------HHHH
Confidence 67999999999999863 478999998875433200 0123
Q ss_pred HHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeee------cCCceEEeeccCCCCCCChHHHHhcCCCHHHHHH
Q 002031 199 NSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ------SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVE 272 (977)
Q Consensus 199 ~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~------~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~ 272 (977)
.+|.+.+..+.+ ..+++++. ....+++|||++|.+|.++........+...+..
T Consensus 54 ~~ei~~l~~l~~--------------------~~i~~~~~~~~~~~~~~~~lv~e~~~~~~l~~~l~~~~~~~~~~~~~~ 113 (284)
T cd05038 54 EREIEILRTLDH--------------------ENIVKYKGVCEKPGGRSLRLIMEYLPSGSLRDYLQRHRDQINLKRLLL 113 (284)
T ss_pred HHHHHHHHhCCC--------------------CChheEEeeeecCCCCceEEEEecCCCCCHHHHHHhCccccCHHHHHH
Confidence 344444333321 11222221 2246899999999999877543222355555555
Q ss_pred HHHHHH--HHHHHhcCccccCCCCCCeEEccCCCCceEEEecccccccC
Q 002031 273 EITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 319 (977)
Q Consensus 273 ~l~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~ 319 (977)
.+.++. +..+|..|++|+|+||.||+++.+ +.++|+|||++..+.
T Consensus 114 ~~~~l~~aL~~lH~~~i~H~dl~p~nil~~~~--~~~~l~dfg~~~~~~ 160 (284)
T cd05038 114 FSSQICKGMDYLGSQRYIHRDLAARNILVESE--DLVKISDFGLAKVLP 160 (284)
T ss_pred HHHHHHHHHHHHHhCCeecCCCCHHhEEEcCC--CCEEEcccccccccc
Confidence 444443 678899999999999999999865 899999999998876
|
Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by aut |
| >cd05054 PTKc_VEGFR Catalytic domain of the Protein Tyrosine Kinases, Vascular Endothelial Growth Factor Receptors | Back alignment and domain information |
|---|
Probab=99.09 E-value=3.7e-10 Score=128.21 Aligned_cols=52 Identities=15% Similarity=0.225 Sum_probs=40.9
Q ss_pred CHHHHHHHHHHHH--HHHHHhcCccccCCCCCCeEEccCCCCceEEEecccccccC
Q 002031 266 NKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 319 (977)
Q Consensus 266 ~~~~l~~~l~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~ 319 (977)
+...+...+.++. +..+|..|++|+|+||.|||++.+ +.++|+|||++..+.
T Consensus 171 ~~~~~~~~~~qi~~aL~~lH~~~ivHrDikp~Nill~~~--~~vkL~DfG~a~~~~ 224 (337)
T cd05054 171 TLEDLISYSFQVARGMEFLASRKCIHRDLAARNILLSEN--NVVKICDFGLARDIY 224 (337)
T ss_pred CHHHHHHHHHHHHHHHHHHHhCCeecCCCCcceEEEeCC--CcEEEeccccchhcc
Confidence 3344444444443 788999999999999999999865 889999999988764
|
Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor (VEGFR) subfamily; catalytic (c) domain. The VEGFR subfamily consists of VEGFR1 (Flt1), VEGFR2 (Flk1), VEGFR3 (Flt4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to recepto |
| >PF06176 WaaY: Lipopolysaccharide core biosynthesis protein (WaaY); InterPro: IPR009330 This family consists of several bacterial lipopolysaccharide core biosynthesis proteins (WaaY or RfaY) | Back alignment and domain information |
|---|
Probab=99.09 E-value=1e-09 Score=113.74 Aligned_cols=70 Identities=37% Similarity=0.716 Sum_probs=55.8
Q ss_pred cCCceEEeeccCCCCCCChHHHHhcCCCHHHHHHHHHHHHHHHHHhcCccccCCCCCCeEEccCCCCceEEEeccccccc
Q 002031 239 SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAYAHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKL 318 (977)
Q Consensus 239 ~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l 318 (977)
++..+|+|||++|.+|.+...+. +.+.+.+.+ .+.++|.+|++|+||||||++++. +.+.+|||+..+..
T Consensus 115 ~~~~~ll~EYIeG~~l~d~~~i~------e~~~~ki~~-~ikqlH~~G~~HGD~hpgNFlv~~---~~i~iID~~~k~~~ 184 (229)
T PF06176_consen 115 TSSYVLLMEYIEGVELNDIEDID------EDLAEKIVE-AIKQLHKHGFYHGDPHPGNFLVSN---NGIRIIDTQGKRMS 184 (229)
T ss_pred eeEEEEEEEEecCeecccchhcC------HHHHHHHHH-HHHHHHHcCCccCCCCcCcEEEEC---CcEEEEECcccccc
Confidence 56678999999999999875432 234444444 479999999999999999999984 46999999987754
|
The waaY, waaQ, and waaP genes are located in the central operon of the waa (formerly rfa) locus on the chromosome of Escherichia coli. This locus contains genes whose products are involved in the assembly of the core region of the lipopolysaccharide molecule. WaaY is the enzyme that phosphorylates HepII in this system [].; GO: 0009244 lipopolysaccharide core region biosynthetic process |
| >cd05065 PTKc_EphR_B Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors | Back alignment and domain information |
|---|
Probab=99.09 E-value=4.3e-10 Score=122.81 Aligned_cols=141 Identities=21% Similarity=0.207 Sum_probs=93.0
Q ss_pred cccccccccEEEEEEec-CC---CEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCcH
Q 002031 124 TPLATASIAQVHRATLV-DG---RQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFN 199 (977)
Q Consensus 124 ~piasaSigqV~~A~l~-~G---~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~ 199 (977)
+-||.|++|.||+|+++ +| ..||||+.......... -+|.
T Consensus 10 ~~lg~g~~g~vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~------------------------------------~~~~ 53 (269)
T cd05065 10 EVIGAGEFGEVCRGRLKLPGKREIFVAIKTLKSGYTEKQR------------------------------------RDFL 53 (269)
T ss_pred eEecCCCCCeEEEEEEecCCCCceeEEEEEcCCCCCHHHH------------------------------------HHHH
Confidence 56899999999999974 34 36999987654221100 0234
Q ss_pred HHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeee-cCCceEEeeccCCCCCCChHHHHhcCCCHHHHHHHHHHHH
Q 002031 200 SEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY 278 (977)
Q Consensus 200 ~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~ 278 (977)
.|+..+..+.+ ..-+.+...+. ....++||||++|.+|.++.......++...+...+.+++
T Consensus 54 ~e~~~l~~l~h-----------------~ni~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~l~ 116 (269)
T cd05065 54 SEASIMGQFDH-----------------PNIIHLEGVVTKSRPVMIITEFMENGALDSFLRQNDGQFTVIQLVGMLRGIA 116 (269)
T ss_pred HHHHHHHhCCC-----------------cCcceEEEEECCCCceEEEEecCCCCcHHHHHhhCCCCCCHHHHHHHHHHHH
Confidence 45544444321 11122222222 4556899999999999876543333345555555444443
Q ss_pred --HHHHHhcCccccCCCCCCeEEccCCCCceEEEecccccccC
Q 002031 279 --AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 319 (977)
Q Consensus 279 --l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~ 319 (977)
+..+|..|++|+|+||.||+++.+ +.++|+|||.+..+.
T Consensus 117 ~al~~lH~~g~~H~dl~p~nili~~~--~~~kl~dfg~~~~~~ 157 (269)
T cd05065 117 AGMKYLSEMNYVHRDLAARNILVNSN--LVCKVSDFGLSRFLE 157 (269)
T ss_pred HHHHHHHHCCEeecccChheEEEcCC--CcEEECCCccccccc
Confidence 678899999999999999999854 889999999987654
|
Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; class EphB receptors; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephr |
| >cd05101 PTKc_FGFR2 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2 | Back alignment and domain information |
|---|
Probab=99.09 E-value=5.2e-10 Score=124.69 Aligned_cols=80 Identities=15% Similarity=0.198 Sum_probs=58.3
Q ss_pred cCCceEEeeccCCCCCCChHHHHh---------------cCCCHHHHHHHHHHHH--HHHHHhcCccccCCCCCCeEEcc
Q 002031 239 SSETVLILEFMDGIRLNDCESLEA---------------FGVNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSK 301 (977)
Q Consensus 239 ~~~~vLVmE~i~G~~L~~~~~~~~---------------~~~~~~~l~~~l~~~~--l~~i~~~G~~H~D~hPgNIlv~~ 301 (977)
....+|+|||++|.+|.++..... ..++...+...+.+++ +..+|..|++|+|+||.||+++.
T Consensus 93 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~givH~dlkp~Nili~~ 172 (304)
T cd05101 93 DGPLYVIVEYASKGNLREYLRARRPPGMEYSYDIARVPDEQMTFKDLVSCTYQVARGMEYLASQKCIHRDLAARNVLVTE 172 (304)
T ss_pred CCceEEEEecCCCCcHHHHHHhcCCcccccccccccCCcccccHHHHHHHHHHHHHHHHHHHHCCeeecccccceEEEcC
Confidence 345689999999999887643211 1122333343333433 67899999999999999999985
Q ss_pred CCCCceEEEecccccccCH
Q 002031 302 DPPHRPILLDFGLTKKLSS 320 (977)
Q Consensus 302 ~~~g~i~LiDFG~~~~l~~ 320 (977)
+ +.++|+|||.+..+..
T Consensus 173 ~--~~~kl~D~g~~~~~~~ 189 (304)
T cd05101 173 N--NVMKIADFGLARDVNN 189 (304)
T ss_pred C--CcEEECCCccceeccc
Confidence 5 8999999999887643
|
Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 2 (FGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR2 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to |
| >cd05579 STKc_MAST_like Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins | Back alignment and domain information |
|---|
Probab=99.09 E-value=3.7e-10 Score=122.31 Aligned_cols=76 Identities=21% Similarity=0.281 Sum_probs=57.7
Q ss_pred CCceEEeeccCCCCCCChHHHHhcCCCHHHHHHHHHHHH--HHHHHhcCccccCCCCCCeEEccCCCCceEEEecccccc
Q 002031 240 SETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKK 317 (977)
Q Consensus 240 ~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~ 317 (977)
...+++|||++|.+|.++..-. ..++...+...+.+++ +..+|..|++|+|++|.||+++.+ +.++|+|||++..
T Consensus 66 ~~~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~i~~qi~~~L~~lH~~~i~H~di~~~nil~~~~--~~~~l~dfg~~~~ 142 (265)
T cd05579 66 KNLYLVMEYLPGGDLASLLENV-GSLDEDVARIYIAEIVLALEYLHSNGIIHRDLKPDNILIDSN--GHLKLTDFGLSKV 142 (265)
T ss_pred cEEEEEEecCCCCcHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHcCeecCCCCHHHeEEcCC--CCEEEEecccchh
Confidence 4468999999999997764321 2345555444444444 678899999999999999999965 8999999998765
Q ss_pred c
Q 002031 318 L 318 (977)
Q Consensus 318 l 318 (977)
.
T Consensus 143 ~ 143 (265)
T cd05579 143 G 143 (265)
T ss_pred c
Confidence 4
|
Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert re |
| >PLN03225 Serine/threonine-protein kinase SNT7; Provisional | Back alignment and domain information |
|---|
Probab=99.09 E-value=4e-10 Score=135.94 Aligned_cols=78 Identities=18% Similarity=0.273 Sum_probs=53.3
Q ss_pred CCceEEeeccCCCCCCChHHHHhcCCC-------------------HHHHHHHHHHHH--HHHHHhcCccccCCCCCCeE
Q 002031 240 SETVLILEFMDGIRLNDCESLEAFGVN-------------------KQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFL 298 (977)
Q Consensus 240 ~~~vLVmE~i~G~~L~~~~~~~~~~~~-------------------~~~l~~~l~~~~--l~~i~~~G~~H~D~hPgNIl 298 (977)
...+|||||+++.+|.++......... ...+...+.+++ +..+|..||+|||+||.|||
T Consensus 208 ~~~~LV~ey~~~gsL~~~l~~~~~~~~v~~~l~~~~~~l~~~~~r~~~~i~~i~~qll~aL~yLH~~gIiHRDLKP~NIL 287 (566)
T PLN03225 208 DEYWLVWRYEGESTLADLMQSKEFPYNVEPYLLGKVQDLPKGLERENKIIQTIMRQILFALDGLHSTGIVHRDVKPQNII 287 (566)
T ss_pred CceEEEEEecCCCcHHHHHHhcCCchhHHHHhccchhhccccchhhHHHHHHHHHHHHHHHHHHHHCCEEeCcCCHHHEE
Confidence 456899999999988776431110000 011112222222 77899999999999999999
Q ss_pred EccCCCCceEEEeccccccc
Q 002031 299 VSKDPPHRPILLDFGLTKKL 318 (977)
Q Consensus 299 v~~~~~g~i~LiDFG~~~~l 318 (977)
++.+ ++.++|+|||+++.+
T Consensus 288 l~~~-~~~~KL~DFGlA~~l 306 (566)
T PLN03225 288 FSEG-SGSFKIIDLGAAADL 306 (566)
T ss_pred EeCC-CCcEEEEeCCCcccc
Confidence 9853 478999999999755
|
|
| >cd05052 PTKc_Abl Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase | Back alignment and domain information |
|---|
Probab=99.09 E-value=4.1e-10 Score=122.64 Aligned_cols=140 Identities=21% Similarity=0.186 Sum_probs=92.4
Q ss_pred cccccccccEEEEEEec-CCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCcHHHH
Q 002031 124 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (977)
Q Consensus 124 ~piasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea 202 (977)
+.||.|++|.||+|..+ +++.||+|+...+... . . ++.+|.
T Consensus 12 ~~ig~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~-----~-----------------------~----------~~~~e~ 53 (263)
T cd05052 12 HKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-----V-----------------------E----------EFLKEA 53 (263)
T ss_pred eecCCcccceEEEEEEecCCceEEEEEecCCchH-----H-----------------------H----------HHHHHH
Confidence 57999999999999974 6899999986543110 0 0 123344
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeee-cCCceEEeeccCCCCCCChHHHHh-cCCCHHHHHHHHHHHH--
Q 002031 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLEA-FGVNKQKVVEEITRAY-- 278 (977)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLVmE~i~G~~L~~~~~~~~-~~~~~~~l~~~l~~~~-- 278 (977)
+.+.++.+ ..-+.+...+. ....+++|||++|.+|.+...... ...+...+...+.+++
T Consensus 54 ~~l~~l~h-----------------~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~l~~~~~~~~~~ql~~~ 116 (263)
T cd05052 54 AVMKEIKH-----------------PNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSA 116 (263)
T ss_pred HHHHhCCC-----------------CChhheEEEEcCCCCcEEEEEeCCCCcHHHHHHhCCCCCCCHHHHHHHHHHHHHH
Confidence 44433321 01112222222 455689999999999987643211 1244444444444433
Q ss_pred HHHHHhcCccccCCCCCCeEEccCCCCceEEEecccccccCH
Q 002031 279 AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 320 (977)
Q Consensus 279 l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 320 (977)
+..+|..|++|+|+||.||+++++ +.++|+|||++..+..
T Consensus 117 l~~lH~~~i~H~dlkp~nil~~~~--~~~kl~df~~~~~~~~ 156 (263)
T cd05052 117 MEYLEKKNFIHRDLAARNCLVGEN--HLVKVADFGLSRLMTG 156 (263)
T ss_pred HHHHHhCCEeecccCcceEEEcCC--CcEEeCCCcccccccc
Confidence 678899999999999999999865 8999999999877653
|
Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays |
| >cd05088 PTKc_Tie2 Catalytic domain of the Protein Tyrosine Kinase, Tie2 | Back alignment and domain information |
|---|
Probab=99.09 E-value=5.4e-10 Score=124.73 Aligned_cols=77 Identities=18% Similarity=0.200 Sum_probs=57.7
Q ss_pred cCCceEEeeccCCCCCCChHHHHh---------------cCCCHHHHHHHHHHHH--HHHHHhcCccccCCCCCCeEEcc
Q 002031 239 SSETVLILEFMDGIRLNDCESLEA---------------FGVNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSK 301 (977)
Q Consensus 239 ~~~~vLVmE~i~G~~L~~~~~~~~---------------~~~~~~~l~~~l~~~~--l~~i~~~G~~H~D~hPgNIlv~~ 301 (977)
....++||||++|.+|.++..... ..++...+...+.++. +..+|..|++|+|++|.|||++.
T Consensus 80 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~gi~H~dlkp~Nili~~ 159 (303)
T cd05088 80 RGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQFIHRDLAARNILVGE 159 (303)
T ss_pred CCCceEEEEeCCCCcHHHHHHhcccccccccccccccccCcCCHHHHHHHHHHHHHHHHHHHhCCccccccchheEEecC
Confidence 456799999999999877643211 1234444444444443 78889999999999999999986
Q ss_pred CCCCceEEEecccccc
Q 002031 302 DPPHRPILLDFGLTKK 317 (977)
Q Consensus 302 ~~~g~i~LiDFG~~~~ 317 (977)
+ +.++|+|||++..
T Consensus 160 ~--~~~kl~dfg~~~~ 173 (303)
T cd05088 160 N--YVAKIADFGLSRG 173 (303)
T ss_pred C--CcEEeCccccCcc
Confidence 5 8899999999864
|
Protein Tyrosine Kinase (PTK) family; Tie2; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie2 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie2 is expressed mainly in endothelial cells and hematopoietic stem cells. It is also found in a subset of tumor-associated monocytes and eosinophils. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2. The binding of A |
| >cd05611 STKc_Rim15_like Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.09 E-value=4.6e-10 Score=121.82 Aligned_cols=77 Identities=19% Similarity=0.301 Sum_probs=58.0
Q ss_pred cCCceEEeeccCCCCCCChHHHHhcCCCHHHHHHHHHHHH--HHHHHhcCccccCCCCCCeEEccCCCCceEEEeccccc
Q 002031 239 SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTK 316 (977)
Q Consensus 239 ~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~ 316 (977)
....++||||++|.+|.++... ....+...+...+.+++ +..+|..|++|+|++|.||+++.+ +.++|+|||++.
T Consensus 69 ~~~~~lv~e~~~~~~L~~~l~~-~~~~~~~~~~~i~~qi~~aL~~lH~~~i~H~dl~p~nil~~~~--~~~~l~dfg~~~ 145 (260)
T cd05611 69 KDYLYLVMEYLNGGDCASLIKT-LGGLPEDWAKQYIAEVVLGVEDLHQRGIIHRDIKPENLLIDQT--GHLKLTDFGLSR 145 (260)
T ss_pred CCeEEEEEeccCCCCHHHHHHH-cCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEECCC--CcEEEeecccce
Confidence 3456899999999999876432 12344444444444433 678999999999999999999865 889999999876
Q ss_pred cc
Q 002031 317 KL 318 (977)
Q Consensus 317 ~l 318 (977)
..
T Consensus 146 ~~ 147 (260)
T cd05611 146 NG 147 (260)
T ss_pred ec
Confidence 54
|
Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a do |
| >PHA02988 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=99.09 E-value=3.8e-10 Score=124.71 Aligned_cols=140 Identities=17% Similarity=0.189 Sum_probs=94.1
Q ss_pred ccccccccccEEEEEEecCCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCcHHHH
Q 002031 123 ETPLATASIAQVHRATLVDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (977)
Q Consensus 123 ~~piasaSigqV~~A~l~~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea 202 (977)
...++.|+++.||+|.. +|+.||||+.+...... ..+++ .|.+|+
T Consensus 25 ~~~i~~g~~~~v~~~~~-~~~~vavK~~~~~~~~~------------------------~~~~~----------~~~~E~ 69 (283)
T PHA02988 25 SVLIKENDQNSIYKGIF-NNKEVIIRTFKKFHKGH------------------------KVLID----------ITENEI 69 (283)
T ss_pred CeEEeeCCceEEEEEEE-CCEEEEEEecccccccc------------------------HHHHH----------HHHHHH
Confidence 45789999999999998 79999999875431100 00011 244566
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeee--------cCCceEEeeccCCCCCCChHHHHhcCCCHHHHHHHH
Q 002031 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ--------SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEI 274 (977)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~--------~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l 274 (977)
..+.++++ + .|.+++. ....+|||||++|++|.++.... ..++.......+
T Consensus 70 ~~l~~l~h------------------~--nIv~~~g~~~~~~~~~~~~~lv~Ey~~~g~L~~~l~~~-~~~~~~~~~~i~ 128 (283)
T PHA02988 70 KNLRRIDS------------------N--NILKIYGFIIDIVDDLPRLSLILEYCTRGYLREVLDKE-KDLSFKTKLDMA 128 (283)
T ss_pred HHHHhcCC------------------C--CEEEEeeeEEecccCCCceEEEEEeCCCCcHHHHHhhC-CCCChhHHHHHH
Confidence 66666533 1 2223321 23458999999999998875322 234444444444
Q ss_pred HHHH--HHHHHh-cCccccCCCCCCeEEccCCCCceEEEecccccccCH
Q 002031 275 TRAY--AHQIYV-DGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 320 (977)
Q Consensus 275 ~~~~--l~~i~~-~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 320 (977)
.++. +..+|. .|++|+|++|.||+++.+ +.++|+|||++..++.
T Consensus 129 ~~i~~~l~~lH~~~~~~Hrdlkp~nill~~~--~~~kl~dfg~~~~~~~ 175 (283)
T PHA02988 129 IDCCKGLYNLYKYTNKPYKNLTSVSFLVTEN--YKLKIICHGLEKILSS 175 (283)
T ss_pred HHHHHHHHHHHhcCCCCCCcCChhhEEECCC--CcEEEcccchHhhhcc
Confidence 4443 677887 599999999999999965 8999999999876543
|
|
| >cd06612 STKc_MST1_2 Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2 | Back alignment and domain information |
|---|
Probab=99.09 E-value=5.1e-10 Score=120.91 Aligned_cols=140 Identities=16% Similarity=0.217 Sum_probs=96.2
Q ss_pred cccccccccEEEEEEec-CCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCcHHHH
Q 002031 124 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (977)
Q Consensus 124 ~piasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea 202 (977)
+.+++|++|.||+|+.+ +++.|++|....... . -++.+|.
T Consensus 9 ~~i~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~------~---------------------------------~~~~~e~ 49 (256)
T cd06612 9 EKLGEGSYGSVYKAIHKETGQVVAIKVVPVEED------L---------------------------------QEIIKEI 49 (256)
T ss_pred hhhcCCCCeEEEEEEEcCCCcEEEEEEeecHHH------H---------------------------------HHHHHHH
Confidence 56999999999999986 489999998653211 0 0233444
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeee-cCCceEEeeccCCCCCCChHHHHhcCCCHHHHHHHHHHHH--H
Q 002031 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--A 279 (977)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~--l 279 (977)
+.+.++.+ ...+.+...+. ....+++|||++|.+|.++.......++...+...+.+++ +
T Consensus 50 ~~~~~l~~-----------------~~i~~~~~~~~~~~~~~l~~e~~~~~~L~~~l~~~~~~l~~~~~~~~~~~l~~~l 112 (256)
T cd06612 50 SILKQCDS-----------------PYIVKYYGSYFKNTDLWIVMEYCGAGSVSDIMKITNKTLTEEEIAAILYQTLKGL 112 (256)
T ss_pred HHHHhCCC-----------------CcEeeeeeeeecCCcEEEEEecCCCCcHHHHHHhCccCCCHHHHHHHHHHHHHHH
Confidence 44444311 11122222222 4556899999999999887544344455555555555443 6
Q ss_pred HHHHhcCccccCCCCCCeEEccCCCCceEEEecccccccCHH
Q 002031 280 HQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSSS 321 (977)
Q Consensus 280 ~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~~ 321 (977)
..+|..|++|+|++|+||+++.+ +.++|+|||++..+...
T Consensus 113 ~~lh~~~i~H~dl~~~ni~~~~~--~~~~l~dfg~~~~~~~~ 152 (256)
T cd06612 113 EYLHSNKKIHRDIKAGNILLNEE--GQAKLADFGVSGQLTDT 152 (256)
T ss_pred HHHHHCCcccCCCCcceEEECCC--CcEEEcccccchhcccC
Confidence 78899999999999999999865 88999999998877543
|
Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a |
| >cd06619 PKc_MKK5 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5 | Back alignment and domain information |
|---|
Probab=99.09 E-value=6.4e-10 Score=122.39 Aligned_cols=137 Identities=20% Similarity=0.194 Sum_probs=89.6
Q ss_pred cccccccccEEEEEEe-cCCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCcHHHH
Q 002031 124 TPLATASIAQVHRATL-VDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (977)
Q Consensus 124 ~piasaSigqV~~A~l-~~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea 202 (977)
+.||.|++|.||+|+. .+++.||||+...+..... +-.+.+|.
T Consensus 7 ~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~------------------------------------~~~~~~E~ 50 (279)
T cd06619 7 EILGHGNGGTVYKAYHLLTRRILAVKVIPLDITVEL------------------------------------QKQIMSEL 50 (279)
T ss_pred eeeccCCCeEEEEEEEcCCCcEEEEEEEecCCChHH------------------------------------HHHHHHHH
Confidence 5799999999999986 5889999998754321100 00233454
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeee-cCCceEEeeccCCCCCCChHHHHhcCCCHHHHHHHHHHHH--H
Q 002031 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--A 279 (977)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~--l 279 (977)
+.+.++.+ ..-+.+-..+. ....+|||||++|.++.... ..+...+...+.+++ +
T Consensus 51 ~~l~~l~h-----------------~~iv~~~~~~~~~~~~~lv~e~~~~~~l~~~~-----~~~~~~~~~~~~qi~~~l 108 (279)
T cd06619 51 EILYKCDS-----------------PYIIGFYGAFFVENRISICTEFMDGGSLDVYR-----KIPEHVLGRIAVAVVKGL 108 (279)
T ss_pred HHHHhCCC-----------------CCeeeEEEEEEECCEEEEEEecCCCCChHHhh-----cCCHHHHHHHHHHHHHHH
Confidence 44443321 01122222222 45568999999998886432 123333333333333 6
Q ss_pred HHHHhcCccccCCCCCCeEEccCCCCceEEEecccccccCH
Q 002031 280 HQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 320 (977)
Q Consensus 280 ~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 320 (977)
..+|..|++|+|+||.||+++.+ +.++|+|||++..+..
T Consensus 109 ~~lH~~~i~H~dlkp~Nill~~~--~~~~l~dfg~~~~~~~ 147 (279)
T cd06619 109 TYLWSLKILHRDVKPSNMLVNTR--GQVKLCDFGVSTQLVN 147 (279)
T ss_pred HHHHHCCEeeCCCCHHHEEECCC--CCEEEeeCCcceeccc
Confidence 78999999999999999999865 8999999999876643
|
Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that p |
| >cd06638 STKc_myosinIIIA Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIA myosin | Back alignment and domain information |
|---|
Probab=99.09 E-value=5e-10 Score=123.39 Aligned_cols=141 Identities=16% Similarity=0.193 Sum_probs=89.4
Q ss_pred cccccccccEEEEEEec-CCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCcHHHH
Q 002031 124 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (977)
Q Consensus 124 ~piasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea 202 (977)
+.||.|++|.||+|+.+ +|+.||||+..+.... . -++.+|.
T Consensus 24 ~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~--~------------------------------------~~~~~e~ 65 (286)
T cd06638 24 ETIGKGTYGKVFKVLNKKNGSKAAVKILDPIHDI--D------------------------------------EEIEAEY 65 (286)
T ss_pred eeeccCCCcEEEEEEECCCCceeEEEeeccccch--H------------------------------------HHHHHHH
Confidence 67999999999999974 7899999986542110 0 0122344
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeee------cCCceEEeeccCCCCCCChHHHH---hcCCCHHHHHHH
Q 002031 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ------SSETVLILEFMDGIRLNDCESLE---AFGVNKQKVVEE 273 (977)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~------~~~~vLVmE~i~G~~L~~~~~~~---~~~~~~~~l~~~ 273 (977)
..+.++.+. ..-+.+...+. ....+|||||++|.+|.++.... ....+...+...
T Consensus 66 ~~l~~l~~h----------------~~i~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~ 129 (286)
T cd06638 66 NILKALSDH----------------PNVVKFYGMYYKKDVKNGDQLWLVLELCNGGSVTDLVKGFLKRGERMEEPIIAYI 129 (286)
T ss_pred HHHHHHhcC----------------CCeeeeeeeeeecccCCCCeEEEEEeecCCCCHHHHHHHhhccCccccHHHHHHH
Confidence 434343210 00112222221 23458999999999998764311 112333333333
Q ss_pred HHHHH--HHHHHhcCccccCCCCCCeEEccCCCCceEEEecccccccCH
Q 002031 274 ITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 320 (977)
Q Consensus 274 l~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 320 (977)
+.++. +..+|..|++|+|+||+||+++.+ +.++|+|||++..+..
T Consensus 130 ~~~i~~~l~~lH~~~i~H~dlkp~nili~~~--~~~kl~dfg~~~~~~~ 176 (286)
T cd06638 130 LHEALMGLQHLHVNKTIHRDVKGNNILLTTE--GGVKLVDFGVSAQLTS 176 (286)
T ss_pred HHHHHHHHHHHHhCCccccCCCHHhEEECCC--CCEEEccCCceeeccc
Confidence 33322 678899999999999999999865 7899999999877643
|
Serine/threonine kinases (STKs), class IIIA myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. In photoreceptor cells, they may also function as cargo carriers during light-dependent translocation of proteins such as transducin and arrestin. Class IIIA myosin is highly expressed in retina and in inner ear |
| >cd06637 STKc_TNIK Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase | Back alignment and domain information |
|---|
Probab=99.08 E-value=4.2e-10 Score=122.91 Aligned_cols=149 Identities=15% Similarity=0.167 Sum_probs=94.0
Q ss_pred hhhcccccCccccccccccEEEEEEec-CCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhc
Q 002031 114 MGGMFMDFVETPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEA 192 (977)
Q Consensus 114 ~~~~f~~~d~~piasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l 192 (977)
+...|... +.||.|++|+||+|+.. +++.||||+....-..
T Consensus 4 ~~~~y~~~--~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~~~~------------------------------------ 45 (272)
T cd06637 4 PAGIFELV--ELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTGDE------------------------------------ 45 (272)
T ss_pred hhhhhhHH--HheeecCCeEEEEEEEcCCCcEEEEEEEEcCCcc------------------------------------
Confidence 44555443 56999999999999974 7899999987422110
Q ss_pred ccccCcHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeee-------cCCceEEeeccCCCCCCChHHHHh-cC
Q 002031 193 PKELDFNSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-------SSETVLILEFMDGIRLNDCESLEA-FG 264 (977)
Q Consensus 193 ~~Eld~~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-------~~~~vLVmE~i~G~~L~~~~~~~~-~~ 264 (977)
+.++.+|...+.++.+. ..-+.+...+. ....++||||+.|.+|.++..... ..
T Consensus 46 --~~~~~~e~~~l~~~~~h----------------~~i~~~~~~~~~~~~~~~~~~~~iv~e~~~~~~L~~~l~~~~~~~ 107 (272)
T cd06637 46 --EEEIKQEINMLKKYSHH----------------RNIATYYGAFIKKNPPGMDDQLWLVMEFCGAGSVTDLIKNTKGNT 107 (272)
T ss_pred --HHHHHHHHHHHHHhcCC----------------CCeeeEeeEEeecCCCCCCcEEEEEEEcCCCCcHHHHHHhccCCC
Confidence 01122333333333110 01122222221 123579999999999887643211 12
Q ss_pred CCHHHHHHHHHHHH--HHHHHhcCccccCCCCCCeEEccCCCCceEEEecccccccCH
Q 002031 265 VNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 320 (977)
Q Consensus 265 ~~~~~l~~~l~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 320 (977)
+....+...+.+++ +..+|..|++|+|+||+||+++.+ +.++|+|||++..+..
T Consensus 108 l~~~~~~~~~~qi~~~l~~LH~~~ivh~dl~~~nili~~~--~~~~l~Dfg~~~~~~~ 163 (272)
T cd06637 108 LKEEWIAYICREILRGLSHLHQHKVIHRDIKGQNVLLTEN--AEVKLVDFGVSAQLDR 163 (272)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHCCCccCCCCHHHEEECCC--CCEEEccCCCceeccc
Confidence 34444444444433 678999999999999999999865 7899999999876643
|
Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activ |
| >cd08219 STKc_Nek3 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 3 | Back alignment and domain information |
|---|
Probab=99.08 E-value=6.9e-10 Score=120.10 Aligned_cols=142 Identities=15% Similarity=0.173 Sum_probs=92.8
Q ss_pred cccccccccEEEEEEec-CCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCcHHHH
Q 002031 124 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (977)
Q Consensus 124 ~piasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea 202 (977)
+.+|.|++|+||++... +|+.||+|..+-..... +. + ++.+|.
T Consensus 6 ~~lg~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~---~~-----------------------~----------~~~~e~ 49 (255)
T cd08219 6 RVVGEGSFGRALLVQHVNSDQKYAMKEIRLPKSSS---AV-----------------------E----------DSRKEA 49 (255)
T ss_pred EEeeccCCeEEEEEEEcCCCceEEEEEEEcCcchH---HH-----------------------H----------HHHHHH
Confidence 57999999999999974 78999999864211100 00 0 122333
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeee-cCCceEEeeccCCCCCCChHHHH-hcCCCHHHHHHHHHHHH--
Q 002031 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLE-AFGVNKQKVVEEITRAY-- 278 (977)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLVmE~i~G~~L~~~~~~~-~~~~~~~~l~~~l~~~~-- 278 (977)
..+.++.+ ..-+.+...+. ....++||||++|.+|.+..... ....+...+...+.++.
T Consensus 50 ~~l~~l~h-----------------~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~a 112 (255)
T cd08219 50 VLLAKMKH-----------------PNIVAFKESFEADGHLYIVMEYCDGGDLMQKIKLQRGKLFPEDTILQWFVQMCLG 112 (255)
T ss_pred HHHHhCCC-----------------CCcceEEEEEEECCEEEEEEeeCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHH
Confidence 33333221 11122223333 56678999999999887654321 12244555544444443
Q ss_pred HHHHHhcCccccCCCCCCeEEccCCCCceEEEecccccccCH
Q 002031 279 AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 320 (977)
Q Consensus 279 l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 320 (977)
+..+|..|++|+|++|.||+++.+ +.++|+|||.+..+..
T Consensus 113 l~~lH~~~i~H~dl~p~nili~~~--~~~~l~dfg~~~~~~~ 152 (255)
T cd08219 113 VQHIHEKRVLHRDIKSKNIFLTQN--GKVKLGDFGSARLLTS 152 (255)
T ss_pred HHHHhhCCcccCCCCcceEEECCC--CcEEEcccCcceeecc
Confidence 788999999999999999999865 8999999999877654
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 3 (Nek3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek3 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek3 is primarily localized in the cytoplasm and shows no cell cycle-dependent changes in its activity. It is present in the axons of neurons and affects morphogenesis and polarity through its regulation of microtubule acetylation. Nek3 modulates the signaling of the prolactin receptor through its activati |
| >cd05062 PTKc_IGF-1R Catalytic domain of the Protein Tyrosine Kinase, Insulin-like Growth Factor-1 Receptor | Back alignment and domain information |
|---|
Probab=99.08 E-value=5.9e-10 Score=122.37 Aligned_cols=79 Identities=19% Similarity=0.235 Sum_probs=58.1
Q ss_pred cCCceEEeeccCCCCCCChHHHHhc---------CCCHHHHHHHHHHHH--HHHHHhcCccccCCCCCCeEEccCCCCce
Q 002031 239 SSETVLILEFMDGIRLNDCESLEAF---------GVNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRP 307 (977)
Q Consensus 239 ~~~~vLVmE~i~G~~L~~~~~~~~~---------~~~~~~l~~~l~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i 307 (977)
....++||||++|.+|.++...... ..+...+...+.++. +..+|..|++|+|+||.||+++.+ +.+
T Consensus 81 ~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~~vH~dlkp~Nil~~~~--~~~ 158 (277)
T cd05062 81 GQPTLVIMELMTRGDLKSYLRSLRPEMENNPVQAPPSLKKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAED--FTV 158 (277)
T ss_pred CCCeEEEEecCCCCCHHHHHHHcCccccccccccCCCHHHHHHHHHHHHHHHHHHHHCCcccCCcchheEEEcCC--CCE
Confidence 4567899999999999876432111 123334444443433 678999999999999999999965 899
Q ss_pred EEEecccccccC
Q 002031 308 ILLDFGLTKKLS 319 (977)
Q Consensus 308 ~LiDFG~~~~l~ 319 (977)
+|+|||++..+.
T Consensus 159 ~l~dfg~~~~~~ 170 (277)
T cd05062 159 KIGDFGMTRDIY 170 (277)
T ss_pred EECCCCCccccC
Confidence 999999987653
|
Protein Tyrosine Kinase (PTK) family; Insulin-like Growth Factor-1 Receptor (IGF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. IGF-1R is a receptor tyr kinases (RTK) that is composed of two alphabeta heterodimers. Binding of the ligand (IGF-1 or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, which stimulates downstream kinase activities and biological function. IGF-1R signaling is important in the differentiation, growth, and survival of normal cells. In cancer cells, wh |
| >KOG1167 consensus Serine/threonine protein kinase of the CDC7 subfamily involved in DNA synthesis, repair and recombination [Replication, recombination and repair] | Back alignment and domain information |
|---|
Probab=99.08 E-value=1.6e-10 Score=127.23 Aligned_cols=134 Identities=19% Similarity=0.326 Sum_probs=89.8
Q ss_pred cccccccccEEEEEEec----CCCEEEEEEecC-ChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCc
Q 002031 124 TPLATASIAQVHRATLV----DGRQVVVKVQHQ-GIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDF 198 (977)
Q Consensus 124 ~piasaSigqV~~A~l~----~G~~VAVKv~~p-~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~ 198 (977)
.+||.|+|+.||+|++. ..+.||+|-.++ ....++..++..|..+-.
T Consensus 42 ~kigeGsFssv~~a~~~~~~~~~~~valk~i~~ts~p~ri~~El~~L~~~gG---------------------------- 93 (418)
T KOG1167|consen 42 NKIGEGSFSSVYKATDIEQDTKRRYVALKAIYRTSSPSRILNELEMLYRLGG---------------------------- 93 (418)
T ss_pred ccccccchhhhhhhhHhhhccccceEeeeecccccCchHHHHHHHHHHHhcc----------------------------
Confidence 57999999999999974 468899996543 233455555544433211
Q ss_pred HHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeeecCCceEEeeccCCCCCCChHHHHhcCCCHHHHHHHHHHHH
Q 002031 199 NSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQSSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY 278 (977)
Q Consensus 199 ~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~ 278 (977)
..|+..+...+.. ....++||||++-....++. ..++...+...+...+
T Consensus 94 ---~~ni~~~~~~~rn------------------------nd~v~ivlp~~~H~~f~~l~----~~l~~~~i~~Yl~~ll 142 (418)
T KOG1167|consen 94 ---SDNIIKLNGCFRN------------------------NDQVAIVLPYFEHDRFRDLY----RSLSLAEIRWYLRNLL 142 (418)
T ss_pred ---chhhhcchhhhcc------------------------CCeeEEEecccCccCHHHHH----hcCCHHHHHHHHHHHH
Confidence 0122222222210 34457899999876665542 2344455555554444
Q ss_pred --HHHHHhcCccccCCCCCCeEEccCCCCceEEEecccccc
Q 002031 279 --AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKK 317 (977)
Q Consensus 279 --l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~ 317 (977)
+.++|..||+|||+||+|+|.+.. .++-+|+|||++..
T Consensus 143 ~Al~~~h~~GIvHRDiKpsNFL~n~~-t~rg~LvDFgLA~~ 182 (418)
T KOG1167|consen 143 KALAHLHKNGIVHRDIKPSNFLYNRR-TQRGVLVDFGLAQR 182 (418)
T ss_pred HHhhhhhccCccccCCCccccccccc-cCCceEEechhHHH
Confidence 888999999999999999999875 67899999999876
|
|
| >cd07832 STKc_CCRK Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase | Back alignment and domain information |
|---|
Probab=99.08 E-value=4e-10 Score=123.99 Aligned_cols=141 Identities=21% Similarity=0.211 Sum_probs=94.1
Q ss_pred cccccccccEEEEEEec-CCCEEEEEEecCChh-hhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCcHHH
Q 002031 124 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIK-TIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSE 201 (977)
Q Consensus 124 ~piasaSigqV~~A~l~-~G~~VAVKv~~p~i~-~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~E 201 (977)
+.||.|++|.||+|+.. +|+.||||+.+.... ... +-++.+|
T Consensus 6 ~~l~~g~~~~v~~~~~~~~~~~~~vK~~~~~~~~~~~------------------------------------~~~~~~e 49 (286)
T cd07832 6 GRIGEGAHGIVFKAKDRETGETVALKKVALRRLEGGI------------------------------------PNQALRE 49 (286)
T ss_pred eecccCCCcEEEEEEECCCCceEEEEEEEcccccchh------------------------------------hHHHHHH
Confidence 46899999999999974 799999998754321 000 0123344
Q ss_pred HHHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeee-cCCceEEeeccCCCCCCChHHHHhcCCCHHHHHHHHHHHH--
Q 002031 202 AENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY-- 278 (977)
Q Consensus 202 a~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~-- 278 (977)
...+.++.+ ..-+.+...+. ....++||||+ |.+|.+........++...+...+.+++
T Consensus 50 ~~~l~~~~~-----------------~~i~~~~~~~~~~~~~~~v~e~~-~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~ 111 (286)
T cd07832 50 IKALQACQH-----------------PYVVKLLDVFPHGSGFVLVMEYM-PSDLSEVLRDEERPLPEAQVKSYMRMLLKG 111 (286)
T ss_pred HHHHHhCCC-----------------CCCcceeeEEecCCeeEEEeccc-CCCHHHHHHhcCCCCCHHHHHHHHHHHHHH
Confidence 444443321 01122222222 45568999999 9998876433333455555555444443
Q ss_pred HHHHHhcCccccCCCCCCeEEccCCCCceEEEecccccccCH
Q 002031 279 AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 320 (977)
Q Consensus 279 l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 320 (977)
+..+|..|++|+|+||.||+++.+ +.++|+|||++..+..
T Consensus 112 l~~lH~~~i~H~dl~p~ni~~~~~--~~~~l~dfg~~~~~~~ 151 (286)
T cd07832 112 VAYMHANGIMHRDLKPANLLISAD--GVLKIADFGLARLFSE 151 (286)
T ss_pred HHHHHHCCeecCCcCHHHEEEcCC--CcEEEeeeeecccccC
Confidence 678899999999999999999865 8899999999887654
|
Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of hea |
| >cd05035 PTKc_Axl_like Catalytic Domain of Axl-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=99.08 E-value=5.8e-10 Score=121.67 Aligned_cols=76 Identities=21% Similarity=0.262 Sum_probs=57.4
Q ss_pred ceEEeeccCCCCCCChHHHHh-----cCCCHHHHHHHHHHHH--HHHHHhcCccccCCCCCCeEEccCCCCceEEEeccc
Q 002031 242 TVLILEFMDGIRLNDCESLEA-----FGVNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGL 314 (977)
Q Consensus 242 ~vLVmE~i~G~~L~~~~~~~~-----~~~~~~~l~~~l~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~ 314 (977)
.+++|||+++.+|........ ..++...+...+.++. +..+|..|++|+|+||.||+++++ ++++|+|||+
T Consensus 82 ~~~v~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~aL~~lH~~~i~H~dlkp~Nil~~~~--~~~kl~dfg~ 159 (273)
T cd05035 82 PMVILPFMKHGDLHSFLLYSRLGGLPEKLPLQTLLKFMVDIALGMEYLSNRNFIHRDLAARNCMLRED--MTVCVADFGL 159 (273)
T ss_pred cEEEEeccCCCCHHHHHHHhhccCCcccCCHHHHHHHHHHHHHHHHHHHhCCeeccccchheEEECCC--CeEEECCccc
Confidence 589999999999876643221 1234444444444443 788999999999999999999865 8999999999
Q ss_pred ccccC
Q 002031 315 TKKLS 319 (977)
Q Consensus 315 ~~~l~ 319 (977)
++.+.
T Consensus 160 ~~~~~ 164 (273)
T cd05035 160 SKKIY 164 (273)
T ss_pred eeecc
Confidence 88664
|
Protein Tyrosine Kinase (PTK) family; Axl subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The Axl subfamily consists of Axl, Tyro3 (or Sky), Mer (or Mertk), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl subfamily members are implicated in a variety of cellu |
| >cd05148 PTKc_Srm_Brk Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk | Back alignment and domain information |
|---|
Probab=99.08 E-value=2.9e-10 Score=123.36 Aligned_cols=141 Identities=15% Similarity=0.142 Sum_probs=91.9
Q ss_pred cccccccccEEEEEEecCCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCcHHHHH
Q 002031 124 TPLATASIAQVHRATLVDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEAE 203 (977)
Q Consensus 124 ~piasaSigqV~~A~l~~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea~ 203 (977)
+.||.|++|.||+|+.++++.|++|+.+....... . ++..|..
T Consensus 12 ~~ig~g~~~~vy~~~~~~~~~~~~k~~~~~~~~~~---------------------------~----------~~~~e~~ 54 (261)
T cd05148 12 RKLGSGYFGEVWEGLWKNRVRVAIKILKSDDLLKQ---------------------------Q----------DFQKEVQ 54 (261)
T ss_pred hhhccCCCccEEEeEecCCCcEEEEeccccchhhH---------------------------H----------HHHHHHH
Confidence 56899999999999998899999998654321000 0 1223333
Q ss_pred HHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeee-cCCceEEeeccCCCCCCChHHHHh-cCCCHHHHHHHHHHHH--H
Q 002031 204 NTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLEA-FGVNKQKVVEEITRAY--A 279 (977)
Q Consensus 204 n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLVmE~i~G~~L~~~~~~~~-~~~~~~~l~~~l~~~~--l 279 (977)
.+..+.+ ...+.+-.... ....++||||++|.+|.+...... ...+...+...+.+++ +
T Consensus 55 ~l~~l~~-----------------~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~al 117 (261)
T cd05148 55 ALKRLRH-----------------KHLISLFAVCSVGEPVYIITELMEKGSLLAFLRSPEGQVLPVASLIDMACQVAEGM 117 (261)
T ss_pred HHhcCCC-----------------cchhheeeeEecCCCeEEEEeecccCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHH
Confidence 3332211 00011111111 445689999999999987643211 1234444444444443 6
Q ss_pred HHHHhcCccccCCCCCCeEEccCCCCceEEEecccccccCH
Q 002031 280 HQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 320 (977)
Q Consensus 280 ~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 320 (977)
..+|..|++|+|++|.||+++.+ +.++|+|||.+..+..
T Consensus 118 ~~lH~~~i~h~dl~~~nilv~~~--~~~kl~d~g~~~~~~~ 156 (261)
T cd05148 118 AYLEEQNSIHRDLAARNILVGED--LVCKVADFGLARLIKE 156 (261)
T ss_pred HHHHHCCeeccccCcceEEEcCC--ceEEEccccchhhcCC
Confidence 78899999999999999999865 8899999999877643
|
Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase dom |
| >cd05048 PTKc_Ror Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors | Back alignment and domain information |
|---|
Probab=99.08 E-value=6.2e-10 Score=122.47 Aligned_cols=141 Identities=16% Similarity=0.218 Sum_probs=91.0
Q ss_pred cccccccccEEEEEEecC------CCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccC
Q 002031 124 TPLATASIAQVHRATLVD------GRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELD 197 (977)
Q Consensus 124 ~piasaSigqV~~A~l~~------G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld 197 (977)
+.||.|++|.||+|.... .+.|++|+.+........ -+
T Consensus 11 ~~lg~G~~g~Vy~~~~~~~~~~~~~~~v~~K~~~~~~~~~~~------------------------------------~~ 54 (283)
T cd05048 11 EELGEGAFGKVYKGELTGPNERLSATSVAIKTLKENAEPKVQ------------------------------------QE 54 (283)
T ss_pred hcccCccCCcEEEEEEecCCCCcceeeEEEEecccCCCHHHH------------------------------------HH
Confidence 579999999999998642 267999987643221110 02
Q ss_pred cHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeee-cCCceEEeeccCCCCCCChHHHHh--------------
Q 002031 198 FNSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLEA-------------- 262 (977)
Q Consensus 198 ~~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLVmE~i~G~~L~~~~~~~~-------------- 262 (977)
|.+|.+.+.++.+ ..-+.+-..+. ....+++|||++|.+|.++.....
T Consensus 55 ~~~ei~~l~~l~h-----------------~~i~~~~~~~~~~~~~~~~~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~ 117 (283)
T cd05048 55 FRQEAELMSDLQH-----------------PNIVCLLGVCTKEQPTCMLFEYLAHGDLHEFLVRNSPHSDVGAESGDETV 117 (283)
T ss_pred HHHHHHHHHhcCC-----------------cccceEEEEEcCCCceEEEEecCCCCcHHHHHHhcCCCcccccccccccc
Confidence 3345554444322 00111112222 355689999999999877643221
Q ss_pred -cCCCHHHHHHHHHHHH--HHHHHhcCccccCCCCCCeEEccCCCCceEEEecccccccC
Q 002031 263 -FGVNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 319 (977)
Q Consensus 263 -~~~~~~~l~~~l~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~ 319 (977)
..++...+...+.++. +..+|..|++|+|+||.||+++++ +.++|+|||++..+.
T Consensus 118 ~~~l~~~~~~~~~~~l~~al~~lH~~~i~H~dlkp~Nil~~~~--~~~~L~dfg~~~~~~ 175 (283)
T cd05048 118 KSSLDCSDFLHIAIQIAAGMEYLSSHHFVHRDLAARNCLVGEG--LTVKISDFGLSRDIY 175 (283)
T ss_pred cCCCCHHHHHHHHHHHHHHHHHHHhCCeeccccccceEEEcCC--CcEEECCCcceeecc
Confidence 1233444444444433 788999999999999999999865 889999999987653
|
Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimer |
| >cd07839 STKc_CDK5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5 | Back alignment and domain information |
|---|
Probab=99.08 E-value=2.8e-10 Score=125.23 Aligned_cols=141 Identities=16% Similarity=0.137 Sum_probs=89.9
Q ss_pred cccccccccEEEEEEec-CCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCcHHHH
Q 002031 124 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (977)
Q Consensus 124 ~piasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea 202 (977)
+.||.|++|.||+|+.+ +|+.||+|+.+...... ..+.++.+|.
T Consensus 6 ~~l~~g~~~~vy~~~~~~~g~~~~~k~~~~~~~~~-----------------------------------~~~~~~~~ei 50 (284)
T cd07839 6 EKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDE-----------------------------------GVPSSALREI 50 (284)
T ss_pred EEecccCCeEEEEEEECCCCcEEEEEEeecccccc-----------------------------------cCccchhHHH
Confidence 56899999999999974 79999999865321100 0011233444
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeee-cCCceEEeeccCCCCCCChHHHHhcCCCHHHHHHHHHHHH--H
Q 002031 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--A 279 (977)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~--l 279 (977)
..+.++.+. .-+.+-..+. ....++||||++| +|.+.........+...+...+.+++ +
T Consensus 51 ~~l~~l~h~-----------------~i~~~~~~~~~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~qi~~al 112 (284)
T cd07839 51 CLLKELKHK-----------------NIVRLYDVLHSDKKLTLVFEYCDQ-DLKKYFDSCNGDIDPEIVKSFMFQLLKGL 112 (284)
T ss_pred HHHHhcCCC-----------------CeeeHHHHhccCCceEEEEecCCC-CHHHHHHhcCCCCCHHHHHHHHHHHHHHH
Confidence 444443210 0111111111 4556899999986 44443221123345555555555544 7
Q ss_pred HHHHhcCccccCCCCCCeEEccCCCCceEEEecccccccC
Q 002031 280 HQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 319 (977)
Q Consensus 280 ~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~ 319 (977)
..+|..|++|+|+||+||+++.+ +.++|+|||++..+.
T Consensus 113 ~~LH~~~i~H~dl~~~nil~~~~--~~~~l~dfg~~~~~~ 150 (284)
T cd07839 113 AFCHSHNVLHRDLKPQNLLINKN--GELKLADFGLARAFG 150 (284)
T ss_pred HHHHHCCEecCCCCHHHEEEcCC--CcEEECccchhhccC
Confidence 88999999999999999999865 899999999987653
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also |
| >cd07867 STKc_CDC2L6 Catalytic domain of Serine/Threonine Kinase, Cell Division Cycle 2-like 6 | Back alignment and domain information |
|---|
Probab=99.08 E-value=4.6e-10 Score=125.72 Aligned_cols=142 Identities=13% Similarity=0.186 Sum_probs=86.9
Q ss_pred cCccccccccccEEEEEEec---CCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccC
Q 002031 121 FVETPLATASIAQVHRATLV---DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELD 197 (977)
Q Consensus 121 ~d~~piasaSigqV~~A~l~---~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld 197 (977)
++...||.|++|.||+|+.+ +++.||||..+..-. ...
T Consensus 4 ~~g~~lG~G~~g~Vy~~~~~~~~~~~~~a~k~~~~~~~---------------------------------------~~~ 44 (317)
T cd07867 4 YEGCKVGRGTYGHVYKAKRKDGKDEKEYALKQIEGTGI---------------------------------------SMS 44 (317)
T ss_pred eeceEeccCCCeeEEEEEecCCCccceEEEEEecCCCC---------------------------------------cHH
Confidence 34467999999999999975 457899997653210 001
Q ss_pred cHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeee---cCCceEEeeccCCCCCCChHHHHh--------cCCC
Q 002031 198 FNSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ---SSETVLILEFMDGIRLNDCESLEA--------FGVN 266 (977)
Q Consensus 198 ~~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~---~~~~vLVmE~i~G~~L~~~~~~~~--------~~~~ 266 (977)
+.+|++.+.++.+ ...+.+-.++. ....++||||+++ .+.+...... ..+.
T Consensus 45 ~~~E~~~l~~l~h-----------------~niv~~~~~~~~~~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~l~ 106 (317)
T cd07867 45 ACREIALLRELKH-----------------PNVIALQKVFLSHSDRKVWLLFDYAEH-DLWHIIKFHRASKANKKPMQLP 106 (317)
T ss_pred HHHHHHHHHhCCC-----------------CCeeeEEEEEeccCCCeEEEEEeeeCC-cHHHHHHhhhccccCCCCccCC
Confidence 2344444444322 11223333332 2345799999986 3433321110 1133
Q ss_pred HHHHHHHHHHHH--HHHHHhcCccccCCCCCCeEEccC--CCCceEEEecccccccC
Q 002031 267 KQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKD--PPHRPILLDFGLTKKLS 319 (977)
Q Consensus 267 ~~~l~~~l~~~~--l~~i~~~G~~H~D~hPgNIlv~~~--~~g~i~LiDFG~~~~l~ 319 (977)
...+...+.+++ +..+|..|++|+|+||.|||+..+ .+++++|+|||+++.+.
T Consensus 107 ~~~~~~i~~qi~~aL~~lH~~~ivH~Dlkp~Nil~~~~~~~~~~~kl~DfG~a~~~~ 163 (317)
T cd07867 107 RSMVKSLLYQILDGIHYLHANWVLHRDLKPANILVMGEGPERGRVKIADMGFARLFN 163 (317)
T ss_pred HHHHHHHHHHHHHHHHHHHhCCEEcCCCCHHHEEEccCCCCCCcEEEeeccceeccC
Confidence 333333333433 778999999999999999999532 24789999999998664
|
Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 6 (CDC2L6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L6 is also called CDK8-like and was previously referred to as CDK11. However, this is a confusing nomenclature as CDC2L6 is distinct from CDC2L1, which is represented by the two protein products from its gene, called CDK11(p110) and CDK11(p58), as well as |
| >cd07870 STKc_PFTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase | Back alignment and domain information |
|---|
Probab=99.08 E-value=4.8e-10 Score=124.03 Aligned_cols=140 Identities=21% Similarity=0.191 Sum_probs=87.6
Q ss_pred ccccccccccEEEEEEec-CCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCcHHH
Q 002031 123 ETPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSE 201 (977)
Q Consensus 123 ~~piasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~E 201 (977)
.+.||+|++|.||+|+.+ +|+.||||+.+...... .+..+.+|
T Consensus 10 ~~~ig~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~------------------------------------~~~~~~~e 53 (291)
T cd07870 10 LEKLGEGSYATVYKGISRINGQLVALKVISMKTEEG------------------------------------VPFTAIRE 53 (291)
T ss_pred EEEEEecCCEEEEEEEEcCCCcEEEEEEecccCcCC------------------------------------CcHHHHHH
Confidence 367999999999999874 79999999865322110 01123345
Q ss_pred HHHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeee-cCCceEEeeccCCCCCCChHHHHhcCCCHHHHHHHHHHHH--
Q 002031 202 AENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY-- 278 (977)
Q Consensus 202 a~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~-- 278 (977)
+..+..+.+ ..-+.+-..+. ....++||||++| ++.+.............+...+.++.
T Consensus 54 ~~~l~~l~h-----------------~ni~~~~~~~~~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~qi~~~ 115 (291)
T cd07870 54 ASLLKGLKH-----------------ANIVLLHDIIHTKETLTFVFEYMHT-DLAQYMIQHPGGLHPYNVRLFMFQLLRG 115 (291)
T ss_pred HHHHHhcCC-----------------CCEeEEEEEEecCCeEEEEEecccC-CHHHHHHhCCCCCCHHHHHHHHHHHHHH
Confidence 544444422 01122222222 3456899999975 44332211112233344444334433
Q ss_pred HHHHHhcCccccCCCCCCeEEccCCCCceEEEeccccccc
Q 002031 279 AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKL 318 (977)
Q Consensus 279 l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l 318 (977)
+..+|..|++|+|+||.||+++.+ ++++|+|||++...
T Consensus 116 L~~lH~~~i~H~dlkp~Nil~~~~--~~~~l~Dfg~~~~~ 153 (291)
T cd07870 116 LAYIHGQHILHRDLKPQNLLISYL--GELKLADFGLARAK 153 (291)
T ss_pred HHHHHhCCcccCCCChHHEEEcCC--CcEEEecccccccc
Confidence 678899999999999999999865 89999999988654
|
Serine/Threonine Kinases (STKs), PFTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-2 is also referred to as ALS2CR7 (amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 7). It may be associated with amyotrophic lateral sclerosis 2 (ALS2), an autosomal recess |
| >cd06628 STKc_MAPKKK_Byr2_like Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases | Back alignment and domain information |
|---|
Probab=99.08 E-value=7.3e-10 Score=120.66 Aligned_cols=148 Identities=16% Similarity=0.119 Sum_probs=93.1
Q ss_pred cccccccccEEEEEEec-CCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCcHHHH
Q 002031 124 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (977)
Q Consensus 124 ~piasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea 202 (977)
..||.|++|+||+|+.. +++.||||+........-..+ ...++.+ .+.+|+
T Consensus 6 ~~ig~g~~~~v~~a~~~~~~~~~~~k~~~~~~~~~~~~~----------------------~~~~~~~------~~~~e~ 57 (267)
T cd06628 6 ALIGSGSFGSVYLGMNASSGELMAVKQVELPSVSASSKD----------------------RKRSMLD------ALAREI 57 (267)
T ss_pred ceeecCCCeEEEEEEecCCCcEEEEEEecCCCcccchhH----------------------HHHHHHH------HHHHHH
Confidence 57899999999999874 789999998754321100000 0000000 233454
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeee-cCCceEEeeccCCCCCCChHHHHhcCCCHHHHHHHHHHHH--H
Q 002031 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--A 279 (977)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~--l 279 (977)
..+.++.+ ..-+.+..... ....+++|||++|.+|.++... ...++...+...+.+++ +
T Consensus 58 ~~l~~l~h-----------------~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~-~~~l~~~~~~~~~~~l~~~l 119 (267)
T cd06628 58 ALLKELQH-----------------ENIVQYLGSSLDADHLNIFLEYVPGGSVAALLNN-YGAFEETLVRNFVRQILKGL 119 (267)
T ss_pred HHHHhcCC-----------------CCeeeEEEEEEeCCccEEEEEecCCCCHHHHHHh-ccCccHHHHHHHHHHHHHHH
Confidence 44444422 01122222222 4667899999999998776432 12234333333333333 6
Q ss_pred HHHHhcCccccCCCCCCeEEccCCCCceEEEecccccccC
Q 002031 280 HQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 319 (977)
Q Consensus 280 ~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~ 319 (977)
..+|..|++|+|++|.||+++++ +.++|+|||++..+.
T Consensus 120 ~~lH~~~ivH~di~p~nil~~~~--~~~~l~dfg~~~~~~ 157 (267)
T cd06628 120 NYLHNRGIIHRDIKGANILVDNK--GGIKISDFGISKKLE 157 (267)
T ss_pred HHHHhcCcccccCCHHHEEEcCC--CCEEecccCCCcccc
Confidence 78899999999999999999855 899999999988775
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate |
| >cd07845 STKc_CDK10 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10 | Back alignment and domain information |
|---|
Probab=99.07 E-value=4e-10 Score=125.95 Aligned_cols=142 Identities=15% Similarity=0.110 Sum_probs=92.6
Q ss_pred cccccccccEEEEEEec-CCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCcHHHH
Q 002031 124 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (977)
Q Consensus 124 ~piasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea 202 (977)
+.||.|++|.||+|+.+ +|+.||+|+.+...... .....+.+|+
T Consensus 13 ~~ig~g~~~~v~~~~~~~~~~~vaiK~~~~~~~~~-----------------------------------~~~~~~~~E~ 57 (309)
T cd07845 13 NRIGEGTYGIVYRARDTTSGEIVALKKVRMDNERD-----------------------------------GIPISSLREI 57 (309)
T ss_pred eeeeecCCEEEEEEEECCCCcEEEEEEEEeccCCC-----------------------------------CCcchhhHHH
Confidence 56999999999999974 79999999875321100 0111234455
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeee-c--CCceEEeeccCCCCCCChHHHHhcCCCHHHHHHHHHHHH-
Q 002031 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-S--SETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY- 278 (977)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~--~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~- 278 (977)
..+.++.+ ...+.+..++. . ...++||||+++ +|.++.......+....+...+.+++
T Consensus 58 ~~l~~l~h-----------------~~i~~~~~~~~~~~~~~~~lv~e~~~~-~l~~~l~~~~~~l~~~~~~~~~~qi~~ 119 (309)
T cd07845 58 TLLLNLRH-----------------PNIVELKEVVVGKHLDSIFLVMEYCEQ-DLASLLDNMPTPFSESQVKCLMLQLLR 119 (309)
T ss_pred HHHHhCCC-----------------CCCcceEEEEecCCCCeEEEEEecCCC-CHHHHHHhcccCCCHHHHHHHHHHHHH
Confidence 55544432 11223333332 1 346899999986 55544322222344555544444444
Q ss_pred -HHHHHhcCccccCCCCCCeEEccCCCCceEEEecccccccCH
Q 002031 279 -AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 320 (977)
Q Consensus 279 -l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 320 (977)
+..+|..|++|+|++|+||+++.+ +.++|+|||++..+..
T Consensus 120 ~l~~lH~~~i~H~dl~p~nil~~~~--~~~kL~dfg~~~~~~~ 160 (309)
T cd07845 120 GLQYLHENFIIHRDLKVSNLLLTDK--GCLKIADFGLARTYGL 160 (309)
T ss_pred HHHHHHhCCeecCCCCHHHEEECCC--CCEEECccceeeecCC
Confidence 778999999999999999999865 8999999999887643
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing |
| >cd08228 STKc_Nek6 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 6 | Back alignment and domain information |
|---|
Probab=99.07 E-value=3.9e-10 Score=122.80 Aligned_cols=144 Identities=18% Similarity=0.169 Sum_probs=92.5
Q ss_pred cccccccccEEEEEEec-CCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCcHHHH
Q 002031 124 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (977)
Q Consensus 124 ~piasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea 202 (977)
+.|+.|++|.||+|+.+ +|+.||||..++-... +.. .+.++.+|.
T Consensus 8 ~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~----~~~------------------------------~~~~~~~e~ 53 (267)
T cd08228 8 KKIGRGQFSEVYRATCLLDRKPVALKKVQIFEMM----DAK------------------------------ARQDCVKEI 53 (267)
T ss_pred eeeccCCCeeEEEEEEeCCCCEEEEEEeeccccC----CHH------------------------------HHHHHHHHH
Confidence 56999999999999974 8999999976431100 000 011234454
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeee-cCCceEEeeccCCCCCCChHHHH---hcCCCHHHHHHHHHHHH
Q 002031 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLE---AFGVNKQKVVEEITRAY 278 (977)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLVmE~i~G~~L~~~~~~~---~~~~~~~~l~~~l~~~~ 278 (977)
+.+.++.+ ..-+.+...+. ....++||||++|.+|.++.... ....+...+...+.++.
T Consensus 54 ~~l~~l~h-----------------~~i~~~~~~~~~~~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~ 116 (267)
T cd08228 54 DLLKQLNH-----------------PNVIKYLDSFIEDNELNIVLELADAGDLSQMIKYFKKQKRLIPERTVWKYFVQLC 116 (267)
T ss_pred HHHHhCCC-----------------cceeeeeeeEEECCeEEEEEEecCCCcHHHHHHHhhhccCCCCHHHHHHHHHHHH
Confidence 44444321 00112222222 45568999999999987764321 11234444444443333
Q ss_pred --HHHHHhcCccccCCCCCCeEEccCCCCceEEEecccccccCH
Q 002031 279 --AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 320 (977)
Q Consensus 279 --l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 320 (977)
+..+|..|++|+|+||.||+++.+ +.++|+|||++..+..
T Consensus 117 ~~l~~LH~~~i~H~dl~~~nil~~~~--~~~~l~d~g~~~~~~~ 158 (267)
T cd08228 117 SAVEHMHSRRVMHRDIKPANVFITAT--GVVKLGDLGLGRFFSS 158 (267)
T ss_pred HHHHHHhhCCeeCCCCCHHHEEEcCC--CCEEECccccceeccc
Confidence 678899999999999999999865 8899999999887754
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 is required for the transition from metaphase to anaphase. It also plays important roles in mitotic spindle formation and cytokinesis. Activated by Nek9 during mitosis, Nek6 phosphorylates Eg5, a kinesin that is important for spindle bipolarity. Nek6 localizes to spindle microtubules during metaphase |
| >cd06655 STKc_PAK2 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2 | Back alignment and domain information |
|---|
Probab=99.07 E-value=4.6e-10 Score=124.89 Aligned_cols=140 Identities=14% Similarity=0.188 Sum_probs=92.8
Q ss_pred cccccccccEEEEEEe-cCCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCcHHHH
Q 002031 124 TPLATASIAQVHRATL-VDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (977)
Q Consensus 124 ~piasaSigqV~~A~l-~~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea 202 (977)
+.||.|++|.||+|+. .+|+.|+||...-..... .+ .+.+|.
T Consensus 25 ~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~~~~~---------------------------~~----------~~~~e~ 67 (296)
T cd06655 25 EKIGQGASGTVFTAIDVATGQEVAIKQINLQKQPK---------------------------KE----------LIINEI 67 (296)
T ss_pred EEEecCCCeEEEEEEEcCCCcEEEEEEEecccCch---------------------------HH----------HHHHHH
Confidence 5699999999999986 589999999763211000 00 122344
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeee-cCCceEEeeccCCCCCCChHHHHhcCCCHHHHHHHHHHHH--H
Q 002031 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--A 279 (977)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~--l 279 (977)
..+..+.+ ...+.+-..+. ....++||||++|.+|.+.. .....+...+...+.+++ +
T Consensus 68 ~~l~~l~h-----------------~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~--~~~~l~~~~~~~i~~~l~~al 128 (296)
T cd06655 68 LVMKELKN-----------------PNIVNFLDSFLVGDELFVVMEYLAGGSLTDVV--TETCMDEAQIAAVCRECLQAL 128 (296)
T ss_pred HHHHhcCC-----------------CceeeeeeeEecCceEEEEEEecCCCcHHHHH--HhcCCCHHHHHHHHHHHHHHH
Confidence 43333321 00111111222 45678999999999988764 333455555555544443 6
Q ss_pred HHHHhcCccccCCCCCCeEEccCCCCceEEEecccccccCHH
Q 002031 280 HQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSSS 321 (977)
Q Consensus 280 ~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~~ 321 (977)
..+|..|++|+|+||.||+++.+ +.++|+|||++..+...
T Consensus 129 ~~LH~~~i~H~dL~p~Nili~~~--~~~kl~dfg~~~~~~~~ 168 (296)
T cd06655 129 EFLHANQVIHRDIKSDNVLLGMD--GSVKLTDFGFCAQITPE 168 (296)
T ss_pred HHHHHCCcccCCCCHHHEEECCC--CCEEEccCccchhcccc
Confidence 78899999999999999999865 89999999998876543
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding |
| >cd08223 STKc_Nek4 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 4 | Back alignment and domain information |
|---|
Probab=99.07 E-value=5.8e-10 Score=120.62 Aligned_cols=142 Identities=15% Similarity=0.134 Sum_probs=91.0
Q ss_pred cccccccccEEEEEEec-CCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCcHHHH
Q 002031 124 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (977)
Q Consensus 124 ~piasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea 202 (977)
+.++.|++|.||+|+.+ +|+.||||......... .+. + .+.+|.
T Consensus 6 ~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~--~~~-----------------------~----------~~~~e~ 50 (257)
T cd08223 6 RVVGKGSYGEVSLVRHRTDGKQYVIKKLNLRNASR--RER-----------------------K----------AAEQEA 50 (257)
T ss_pred EEecCCCCeEEEEEEEcCCCcEEEEEEEehhhcCH--HHH-----------------------H----------HHHHHH
Confidence 57899999999999974 68999999764211100 000 0 123344
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeee--cCCceEEeeccCCCCCCChHHHHh-cCCCHHHHHHHHHHHH-
Q 002031 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ--SSETVLILEFMDGIRLNDCESLEA-FGVNKQKVVEEITRAY- 278 (977)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~--~~~~vLVmE~i~G~~L~~~~~~~~-~~~~~~~l~~~l~~~~- 278 (977)
..+.++++ ...+.+...+. ....+++|||++|.+|.+...... ...+...+...+.++.
T Consensus 51 ~~l~~l~~-----------------~~i~~~~~~~~~~~~~~~lv~e~~~~~~l~~~l~~~~~~~l~~~~~~~~~~~l~~ 113 (257)
T cd08223 51 QLLSQLKH-----------------PNIVAYRESWEGEDGLLYIVMGFCEGGDLYHKLKEQKGKLLPENQVVEWFVQIAM 113 (257)
T ss_pred HHHHhCCC-----------------CCeeeeeeeecCCCCEEEEEecccCCCcHHHHHHHhcCCCCCHHHHHHHHHHHHH
Confidence 43333321 11122222222 223579999999998876643221 2245555555555544
Q ss_pred -HHHHHhcCccccCCCCCCeEEccCCCCceEEEecccccccC
Q 002031 279 -AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 319 (977)
Q Consensus 279 -l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~ 319 (977)
+..+|..|++|+|++|.||+++.+ +.++|+|||++..+.
T Consensus 114 ~l~~lH~~~i~H~di~p~nil~~~~--~~~~l~df~~~~~~~ 153 (257)
T cd08223 114 ALQYLHEKHILHRDLKTQNVFLTRT--NIIKVGDLGIARVLE 153 (257)
T ss_pred HHHHHHhCCeeccCCCchhEEEecC--CcEEEecccceEEec
Confidence 788999999999999999999865 899999999987664
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 4 (Nek4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek4 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Nek4 is highly abundant in the testis. Its specific function is unknown. |
| >cd06615 PKc_MEK Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase | Back alignment and domain information |
|---|
Probab=99.07 E-value=6.8e-10 Score=124.20 Aligned_cols=140 Identities=19% Similarity=0.148 Sum_probs=92.3
Q ss_pred cccccccccEEEEEEec-CCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCcHHHH
Q 002031 124 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (977)
Q Consensus 124 ~piasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea 202 (977)
+.||+|++|.||+|+.. +|+.||+|+.+........ .++.+|+
T Consensus 7 ~~lg~G~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~------------------------------------~~~~~E~ 50 (308)
T cd06615 7 GELGAGNGGVVTKVLHRPSGLIMARKLIHLEIKPAIR------------------------------------NQIIREL 50 (308)
T ss_pred eeccCCCCeEEEEEEEcCCCeEEEEEEeccccCHHHH------------------------------------HHHHHHH
Confidence 56999999999999974 7889999987643321110 0233455
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeee-cCCceEEeeccCCCCCCChHHHHhcCCCHHHHHHHHHHHH--H
Q 002031 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--A 279 (977)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~--l 279 (977)
+.+.++.+ ..-+.+...+. ....+|||||++|.+|.++.... ..++...+...+.+++ +
T Consensus 51 ~~l~~l~h-----------------~~iv~~~~~~~~~~~~~lv~ey~~~~~L~~~l~~~-~~~~~~~~~~~~~~i~~~l 112 (308)
T cd06615 51 KVLHECNS-----------------PYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKA-GRIPENILGKISIAVLRGL 112 (308)
T ss_pred HHHHhCCC-----------------CCCCeEEEEEeeCCEEEEEeeccCCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHH
Confidence 55544422 11122223332 45678999999999998774322 2334444333333333 6
Q ss_pred HHHHh-cCccccCCCCCCeEEccCCCCceEEEecccccccC
Q 002031 280 HQIYV-DGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 319 (977)
Q Consensus 280 ~~i~~-~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~ 319 (977)
..+|. .|++|+|+||.||+++.+ +.++|+|||++..+.
T Consensus 113 ~~lH~~~~i~H~dl~p~nil~~~~--~~~~l~dfg~~~~~~ 151 (308)
T cd06615 113 TYLREKHKIMHRDVKPSNILVNSR--GEIKLCDFGVSGQLI 151 (308)
T ss_pred HHHHhhCCEEECCCChHHEEEecC--CcEEEccCCCccccc
Confidence 67886 699999999999999865 889999999986553
|
Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the down |
| >cd07861 STKc_CDK1_euk Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like | Back alignment and domain information |
|---|
Probab=99.07 E-value=3.8e-10 Score=124.18 Aligned_cols=141 Identities=16% Similarity=0.128 Sum_probs=89.8
Q ss_pred cccccccccEEEEEEec-CCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCcHHHH
Q 002031 124 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (977)
Q Consensus 124 ~piasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea 202 (977)
+.||+|++|.||+|+.+ +|+.||||+.+......- ..-.+.+|+
T Consensus 6 ~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~-----------------------------------~~~~~~~e~ 50 (285)
T cd07861 6 EKIGEGTYGVVYKGRNKKTGQIVAMKKIRLESEEEG-----------------------------------VPSTAIREI 50 (285)
T ss_pred eEecccCceEEEEEEECCCCcEEEEEEeccccccCC-----------------------------------chHHHHHHH
Confidence 57899999999999974 799999998753211000 000123344
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeee-cCCceEEeeccCCCCCCChHHHHh--cCCCHHHHHHHHHHHH-
Q 002031 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLEA--FGVNKQKVVEEITRAY- 278 (977)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLVmE~i~G~~L~~~~~~~~--~~~~~~~l~~~l~~~~- 278 (977)
..+.++.+ ..-+.+-..+. ....++||||++| .|.+...... ..++...+...+.+++
T Consensus 51 ~~l~~l~h-----------------~~i~~~~~~~~~~~~~~~v~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~qi~~ 112 (285)
T cd07861 51 SLLKELQH-----------------PNIVCLQDVLMQESRLYLIFEFLSM-DLKKYLDSLPKGQYMDAELVKSYLYQILQ 112 (285)
T ss_pred HHHHhcCC-----------------CCEeeeEEEEeeCCeEEEEEecCCC-CHHHHHhcCCCCCcCCHHHHHHHHHHHHH
Confidence 44444321 01122222222 4567899999986 4544322111 2345555544444444
Q ss_pred -HHHHHhcCccccCCCCCCeEEccCCCCceEEEecccccccC
Q 002031 279 -AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 319 (977)
Q Consensus 279 -l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~ 319 (977)
+..+|..|++|+|+||.||+++.+ +.++|+|||++..+.
T Consensus 113 ~L~~lH~~~i~H~dl~p~nil~~~~--~~~~l~dfg~~~~~~ 152 (285)
T cd07861 113 GILFCHSRRVLHRDLKPQNLLIDNK--GVIKLADFGLARAFG 152 (285)
T ss_pred HHHHHHhCCeeecCCCHHHEEEcCC--CcEEECcccceeecC
Confidence 778899999999999999999865 899999999987553
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2 |
| >cd05036 PTKc_ALK_LTK Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase | Back alignment and domain information |
|---|
Probab=99.07 E-value=5.1e-10 Score=122.97 Aligned_cols=143 Identities=17% Similarity=0.141 Sum_probs=92.9
Q ss_pred cccccccccEEEEEEec------CCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccC
Q 002031 124 TPLATASIAQVHRATLV------DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELD 197 (977)
Q Consensus 124 ~piasaSigqV~~A~l~------~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld 197 (977)
+.||.|++|.||+|... .+..|++|......... .+.+
T Consensus 12 ~~lg~g~~g~vy~~~~~~~~~~~~~~~v~ik~~~~~~~~~------------------------------------~~~~ 55 (277)
T cd05036 12 RALGHGAFGEVYEGLYRGRDGDAVELQVAVKTLPESCSEQ------------------------------------DESD 55 (277)
T ss_pred eECCCCCCCcEEEEEEecCCCCCCceeEEEEEcCCCCCHH------------------------------------HHHH
Confidence 57999999999999975 35678899764322111 1123
Q ss_pred cHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeee-cCCceEEeeccCCCCCCChHHHHhc------CCCHHHH
Q 002031 198 FNSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAF------GVNKQKV 270 (977)
Q Consensus 198 ~~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLVmE~i~G~~L~~~~~~~~~------~~~~~~l 270 (977)
|.+|...+.++.+ ..-+.+-.... ....++||||++|.+|.++...... .++...+
T Consensus 56 ~~~e~~~l~~l~~-----------------~~i~~~~~~~~~~~~~~lv~e~~~g~~L~~~i~~~~~~~~~~~~~~~~~~ 118 (277)
T cd05036 56 FLMEALIMSKFNH-----------------QNIVRLIGVSFERLPRFILLELMAGGDLKSFLRENRPRPERPSSLTMKDL 118 (277)
T ss_pred HHHHHHHHHhCCC-----------------CCEeeEEEEEccCCCcEEEEecCCCCCHHHHHHHhCCCCCCCCCCCHHHH
Confidence 4555554444422 00111222111 4567899999999999877432211 2344555
Q ss_pred HHHHHHHH--HHHHHhcCccccCCCCCCeEEccCC-CCceEEEecccccccC
Q 002031 271 VEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDP-PHRPILLDFGLTKKLS 319 (977)
Q Consensus 271 ~~~l~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~-~g~i~LiDFG~~~~l~ 319 (977)
...+.++. +..+|..|++|+|+||.||+++.++ +..++|+|||++..+.
T Consensus 119 ~~~~~qi~~~l~~LH~~~ivH~dlkp~nil~~~~~~~~~~kl~dfg~~~~~~ 170 (277)
T cd05036 119 LFCARDVAKGCKYLEENHFIHRDIAARNCLLTCKGPGRVAKIADFGMARDIY 170 (277)
T ss_pred HHHHHHHHHHHHHHHHCCEeecccchheEEEeccCCCcceEeccCccccccC
Confidence 55555544 7788999999999999999998542 2358999999988763
|
Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well |
| >KOG0196 consensus Tyrosine kinase, EPH (ephrin) receptor family [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.07 E-value=7e-11 Score=137.58 Aligned_cols=176 Identities=17% Similarity=0.193 Sum_probs=122.7
Q ss_pred HHhCCCCCCHHHHHHHHHHHhCCChhhcccccCccccccccccEEEEEEec----CCCEEEEEEecCChhhhhHhhHHHH
Q 002031 90 LQDSLPPRPVQEVSQTIEREFGESMGGMFMDFVETPLATASIAQVHRATLV----DGRQVVVKVQHQGIKTIILEDLKNA 165 (977)
Q Consensus 90 Lqd~~p~~~~~~v~~~l~~elg~~~~~~f~~~d~~piasaSigqV~~A~l~----~G~~VAVKv~~p~i~~~~~~Dl~~l 165 (977)
.+.-+.|+.+|+--+.+. ||-+.++--+-.|+ +.||+|.||.|++|+|+ ....||||.++-|..+.-
T Consensus 603 ~k~YiDP~TYEDPnqAvr-eFakEId~s~i~Ie-~VIGaGEFGEVc~GrLk~pgkre~~VAIKTLK~Gytekq------- 673 (996)
T KOG0196|consen 603 TKTYIDPHTYEDPNQAVR-EFAKEIDPSCVKIE-KVIGAGEFGEVCSGRLKLPGKREITVAIKTLKAGYTEKQ------- 673 (996)
T ss_pred ceeecCCccccCccHHHH-HhhhhcChhheEEE-EEEecccccceecccccCCCCcceeEEEeeeccCccHHH-------
Confidence 444566777765444433 34444444444454 68999999999999995 235699999988765432
Q ss_pred HHHHHHHHhhCCCCCCchhHHHHhhhcccccCcHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeee-cCCceE
Q 002031 166 KSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVL 244 (977)
Q Consensus 166 ~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vL 244 (977)
..||+.||.-+-+|.| +..++.--|.. +..-.+
T Consensus 674 -----------------------------rrdFL~EAsIMGQFdH-----------------PNIIrLEGVVTks~PvMI 707 (996)
T KOG0196|consen 674 -----------------------------RRDFLSEASIMGQFDH-----------------PNIIRLEGVVTKSKPVMI 707 (996)
T ss_pred -----------------------------HhhhhhhhhhcccCCC-----------------CcEEEEEEEEecCceeEE
Confidence 2378888887766533 22355555655 444568
Q ss_pred EeeccCCCCCCChHHHHhcCCCHHHHHHH--HHHHHHHHHHhcCccccCCCCCCeEEccCCCCceEEEecccccccCHHH
Q 002031 245 ILEFMDGIRLNDCESLEAFGVNKQKVVEE--ITRAYAHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSSSM 322 (977)
Q Consensus 245 VmE~i~G~~L~~~~~~~~~~~~~~~l~~~--l~~~~l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~~~ 322 (977)
++|||+.++|+.+......++..-+++.. .+..-++.+-..|+|||||-..||||+.+ -..++.|||+.+.+.++.
T Consensus 708 iTEyMENGsLDsFLR~~DGqftviQLVgMLrGIAsGMkYLsdm~YVHRDLAARNILVNsn--LvCKVsDFGLSRvledd~ 785 (996)
T KOG0196|consen 708 ITEYMENGSLDSFLRQNDGQFTVIQLVGMLRGIASGMKYLSDMNYVHRDLAARNILVNSN--LVCKVSDFGLSRVLEDDP 785 (996)
T ss_pred EhhhhhCCcHHHHHhhcCCceEeehHHHHHHHHHHHhHHHhhcCchhhhhhhhheeeccc--eEEEeccccceeecccCC
Confidence 99999999999986655444544444443 33444888889999999999999999854 667899999999886543
|
|
| >cd07837 STKc_CdkB_plant Catalytic domain of the Serine/Threonine Kinase, Plant B-type Cyclin-Dependent protein Kinase | Back alignment and domain information |
|---|
Probab=99.07 E-value=6.4e-10 Score=123.09 Aligned_cols=143 Identities=17% Similarity=0.192 Sum_probs=90.7
Q ss_pred cccccccccEEEEEEec-CCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCcHHHH
Q 002031 124 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (977)
Q Consensus 124 ~piasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea 202 (977)
+-||.|++|.||+|+.+ +|+.||||+.+...... .....+.+|.
T Consensus 7 ~~lg~g~~g~vy~~~~~~~~~~v~lK~~~~~~~~~-----------------------------------~~~~~~~~E~ 51 (295)
T cd07837 7 EKIGEGTYGKVYKARDKNTGKLVALKKTRLEMDEE-----------------------------------GIPPTALREI 51 (295)
T ss_pred eEecccCCeEEEEEEECCCCcEEEEEeehhhcccc-----------------------------------CCchHHHHHH
Confidence 46899999999999974 79999999764321100 0001234455
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeeecC------CceEEeeccCCCCCCChHHHHh----cCCCHHHHHH
Q 002031 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQSS------ETVLILEFMDGIRLNDCESLEA----FGVNKQKVVE 272 (977)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~~~------~~vLVmE~i~G~~L~~~~~~~~----~~~~~~~l~~ 272 (977)
..+..+.+. ...+.+..+.... ..++||||++| ++.+...... ..++...+..
T Consensus 52 ~~l~~l~~~----------------~~i~~~~~~~~~~~~~~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~ 114 (295)
T cd07837 52 SLLQMLSES----------------IYIVRLLDVEHVEEKNGKPSLYLVFEYLDS-DLKKFMDSNGRGPGRPLPAKTIKS 114 (295)
T ss_pred HHHHHccCC----------------CCccceeeeEeecCCCCCceEEEEeeccCc-CHHHHHHHhcccCCCCCCHHHHHH
Confidence 544444320 0112222222211 14899999997 5655432221 1234555555
Q ss_pred HHHHHH--HHHHHhcCccccCCCCCCeEEccCCCCceEEEecccccccC
Q 002031 273 EITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 319 (977)
Q Consensus 273 ~l~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~ 319 (977)
.+.+++ +..+|..|++|+|+||+||+++.+ ++.++|+|||++..+.
T Consensus 115 ~~~qi~~~L~~LH~~~i~H~dl~~~nil~~~~-~~~~kl~dfg~~~~~~ 162 (295)
T cd07837 115 FMYQLLKGVAHCHKHGVMHRDLKPQNLLVDKQ-KGLLKIADLGLGRAFS 162 (295)
T ss_pred HHHHHHHHHHHHHHCCeeecCCChHHEEEecC-CCeEEEeecccceecC
Confidence 555544 788999999999999999999862 4789999999987653
|
Serine/Threonine Kinases (STKs), Plant B-type Cyclin-Dependent protein Kinase (CdkB) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CdkB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The plant-specific B-type CDKs are expressed from the late S to the M phase of the cell cycle. They are characterized by the cyclin binding motif PPT[A/T]LRE. They play a role in controlling mitosis and integrating developm |
| >KOG1164 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.07 E-value=5.1e-10 Score=126.22 Aligned_cols=140 Identities=15% Similarity=0.283 Sum_probs=95.4
Q ss_pred ccccccccccEEEEEEecC--CCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCcHH
Q 002031 123 ETPLATASIAQVHRATLVD--GRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNS 200 (977)
Q Consensus 123 ~~piasaSigqV~~A~l~~--G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~ 200 (977)
.+.||+|+||+||.+...+ .+.+|+|+........- . .+..
T Consensus 23 ~~~iG~G~fG~V~~v~~~~~~~~~~a~K~e~~~~~~~~------------------------------------~-~l~~ 65 (322)
T KOG1164|consen 23 GKKIGEGGFGAVYLVSDKSEKNKEYAKKLEKKELGSKP------------------------------------S-VLKI 65 (322)
T ss_pred eeeccccCCceEEEEEecCCCCeeEEEEEEEecccCCC------------------------------------c-cchh
Confidence 4689999999999999754 35899998754321100 0 1222
Q ss_pred HHHHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeeec-----CCceEEeeccCCCCCCChHHHHh-cCCCHHHHHHHH
Q 002031 201 EAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQS-----SETVLILEFMDGIRLNDCESLEA-FGVNKQKVVEEI 274 (977)
Q Consensus 201 Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~~-----~~~vLVmE~i~G~~L~~~~~~~~-~~~~~~~l~~~l 274 (977)
|...+..+... .....+|.++.. .-+++||+.+ |.+|.++..... ..++...++...
T Consensus 66 E~~vl~~l~~~----------------~~~~~~~~~~~~G~~~~~~~~iVM~l~-G~sL~dl~~~~~~~~fs~~T~l~ia 128 (322)
T KOG1164|consen 66 EIQVLKKLEKK----------------NGPSHFPKLLDHGRSTEDFNFIVMSLL-GPSLEDLRKRNPPGRFSRKTVLRIA 128 (322)
T ss_pred HHHHHHHHhhh----------------cCCCCCCEEEEeccCCCceeEEEEecc-CccHHHHHHhCCCCCcCHhHHHHHH
Confidence 33333333220 112456666642 2469999988 888888753332 346677777777
Q ss_pred HHHH--HHHHHhcCccccCCCCCCeEEccCC-C--CceEEEeccccc
Q 002031 275 TRAY--AHQIYVDGFFNGDPHPGNFLVSKDP-P--HRPILLDFGLTK 316 (977)
Q Consensus 275 ~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~-~--g~i~LiDFG~~~ 316 (977)
++++ ++.+|..|++|||+||+|+++.... . ..+.|+|||+++
T Consensus 129 ~q~l~~l~~lH~~G~iHRDiKp~N~~~g~~~~~~~~~~~llDfGlar 175 (322)
T KOG1164|consen 129 IQNLNALEDLHSKGFIHRDIKPENFVVGQSSRSEVRTLYLLDFGLAR 175 (322)
T ss_pred HHHHHHHHHHHhcCcccCCcCHHHeeecCCCCcccceEEEEecCCCc
Confidence 7766 9999999999999999999998542 1 469999999999
|
|
| >cd07879 STKc_p38delta_MAPK13 Catalytic domain of the Serine/Threonine Kinase, p38delta Mitogen-Activated Protein Kinase | Back alignment and domain information |
|---|
Probab=99.07 E-value=6.8e-10 Score=126.20 Aligned_cols=153 Identities=18% Similarity=0.250 Sum_probs=94.7
Q ss_pred HHhCCChhhcccccC-ccccccccccEEEEEEe-cCCCEEEEEEecCChh-hhhHhhHHHHHHHHHHHHhhCCCCCCchh
Q 002031 108 REFGESMGGMFMDFV-ETPLATASIAQVHRATL-VDGRQVVVKVQHQGIK-TIILEDLKNAKSIVDWIAWAEPQYDFNPI 184 (977)
Q Consensus 108 ~elg~~~~~~f~~~d-~~piasaSigqV~~A~l-~~G~~VAVKv~~p~i~-~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~ 184 (977)
++.++.+.++...|. .++||+|++|.||+|+. .+|+.||||+.+.... ....
T Consensus 4 ~~~~~~~~~~~~~y~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~------------------------- 58 (342)
T cd07879 4 EEVNKTVWELPERYTSLKQVGSGAYGSVCSAIDKRTGEKVAIKKLSRPFQSEIFA------------------------- 58 (342)
T ss_pred hhhhhhhhccccceEEEEEeeecCCeEEEEEEeCCCCcEEEEEEecCccccccch-------------------------
Confidence 345555555555554 47999999999999997 4799999998653211 1000
Q ss_pred HHHHhhhcccccCcHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeee-------cCCceEEeeccCCCCCCCh
Q 002031 185 IDEWCKEAPKELDFNSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-------SSETVLILEFMDGIRLNDC 257 (977)
Q Consensus 185 ~~e~~~~l~~Eld~~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-------~~~~vLVmE~i~G~~L~~~ 257 (977)
.++.+|.+.+.++.+. .-+.+..++. ....++||||+.+ .+.
T Consensus 59 -----------~~~~~e~~~l~~l~h~-----------------niv~~~~~~~~~~~~~~~~~~~lv~e~~~~-~l~-- 107 (342)
T cd07879 59 -----------KRAYRELTLLKHMQHE-----------------NVIGLLDVFTSAVSGDEFQDFYLVMPYMQT-DLQ-- 107 (342)
T ss_pred -----------hHHHHHHHHHHhcCCC-----------------CccchhheecccccCCCCceEEEEeccccc-CHH--
Confidence 0122333333333210 0111111111 1334899999964 332
Q ss_pred HHHHhcCCCHHHHHHHHHHHH--HHHHHhcCccccCCCCCCeEEccCCCCceEEEecccccccC
Q 002031 258 ESLEAFGVNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 319 (977)
Q Consensus 258 ~~~~~~~~~~~~l~~~l~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~ 319 (977)
......+....+...+.+++ +..+|..|++|+|+||+||+++.+ +.++|+|||++....
T Consensus 108 -~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~i~H~dlkp~NIll~~~--~~~kL~dfg~~~~~~ 168 (342)
T cd07879 108 -KIMGHPLSEDKVQYLVYQMLCGLKYIHSAGIIHRDLKPGNLAVNED--CELKILDFGLARHAD 168 (342)
T ss_pred -HHHcCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCC--CCEEEeeCCCCcCCC
Confidence 22223455555555554444 778999999999999999999865 899999999987654
|
Serine/Threonine Kinases (STKs), p38delta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38delta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38delta, also called MAPK13 |
| >PTZ00284 protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.07 E-value=2.2e-10 Score=136.03 Aligned_cols=143 Identities=16% Similarity=0.082 Sum_probs=84.6
Q ss_pred cccccccccEEEEEEec-CCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCcHHHH
Q 002031 124 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (977)
Q Consensus 124 ~piasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea 202 (977)
+.||.|++|.||+|+.. +++.||||+.+.... ... ++..|.
T Consensus 135 ~~lG~G~fg~V~~a~~~~~~~~vAvK~i~~~~~--~~~------------------------------------~~~~e~ 176 (467)
T PTZ00284 135 SLLGEGTFGKVVEAWDRKRKEYCAVKIVRNVPK--YTR------------------------------------DAKIEI 176 (467)
T ss_pred EEEEeccCEEEEEEEEcCCCeEEEEEEEecchh--hHH------------------------------------HHHHHH
Confidence 57999999999999974 688999998753110 000 011222
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeee--cCCceEEeeccCCCCCCChHHHHhcCCCHHHHHHHHHHHH--
Q 002031 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ--SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY-- 278 (977)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~--~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~-- 278 (977)
..++++++.-. ......+.+...+. ....+||||++ |..|.++.. ....+....+...+.+++
T Consensus 177 ~~l~~l~~~~~-----------~~~~~i~~i~~~~~~~~~~~~iv~~~~-g~~l~~~l~-~~~~l~~~~~~~i~~qi~~a 243 (467)
T PTZ00284 177 QFMEKVRQADP-----------ADRFPLMKIQRYFQNETGHMCIVMPKY-GPCLLDWIM-KHGPFSHRHLAQIIFQTGVA 243 (467)
T ss_pred HHHHHHhhcCc-----------ccCcceeeeEEEEEcCCceEEEEEecc-CCCHHHHHH-HcCCCCHHHHHHHHHHHHHH
Confidence 22333322100 00011122333333 24468999988 555554422 222345555555555544
Q ss_pred HHHHHh-cCccccCCCCCCeEEccCC--------------CCceEEEecccccc
Q 002031 279 AHQIYV-DGFFNGDPHPGNFLVSKDP--------------PHRPILLDFGLTKK 317 (977)
Q Consensus 279 l~~i~~-~G~~H~D~hPgNIlv~~~~--------------~g~i~LiDFG~~~~ 317 (977)
+..+|. .||+||||||+|||++.++ .+.++|+|||.+..
T Consensus 244 L~yLH~~~gIiHrDlKP~NILl~~~~~~~~~~~~~~~~~~~~~vkl~DfG~~~~ 297 (467)
T PTZ00284 244 LDYFHTELHLMHTDLKPENILMETSDTVVDPVTNRALPPDPCRVRICDLGGCCD 297 (467)
T ss_pred HHHHHhcCCeecCCCCHHHEEEecCCcccccccccccCCCCceEEECCCCcccc
Confidence 788897 5999999999999998542 12599999997654
|
|
| >cd05583 STKc_MSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase | Back alignment and domain information |
|---|
Probab=99.07 E-value=4.6e-10 Score=123.99 Aligned_cols=78 Identities=22% Similarity=0.273 Sum_probs=57.6
Q ss_pred CCceEEeeccCCCCCCChHHHHhcCCCHHHHHHHHHHHH--HHHHHhcCccccCCCCCCeEEccCCCCceEEEecccccc
Q 002031 240 SETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKK 317 (977)
Q Consensus 240 ~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~ 317 (977)
...+|||||++|.+|.+.... ...+....+...+.++. +..+|..|++|+|+||.||+++.+ +.++|+|||++..
T Consensus 78 ~~~~lv~e~~~~~~L~~~~~~-~~~~~~~~~~~~~~ql~~~l~~lH~~~~~H~dl~p~nil~~~~--~~~~l~dfg~~~~ 154 (288)
T cd05583 78 TKLHLILDYVNGGELFTHLYQ-REHFTESEVRVYIAEIVLALDHLHQLGIIYRDIKLENILLDSE--GHVVLTDFGLSKE 154 (288)
T ss_pred CEEEEEEecCCCCcHHHHHhh-cCCcCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHeEECCC--CCEEEEECccccc
Confidence 445799999999888765321 22344444444443433 678899999999999999999865 8899999999876
Q ss_pred cCH
Q 002031 318 LSS 320 (977)
Q Consensus 318 l~~ 320 (977)
+..
T Consensus 155 ~~~ 157 (288)
T cd05583 155 FLA 157 (288)
T ss_pred ccc
Confidence 543
|
Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines |
| >cd05098 PTKc_FGFR1 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1 | Back alignment and domain information |
|---|
Probab=99.07 E-value=7.4e-10 Score=123.72 Aligned_cols=143 Identities=19% Similarity=0.221 Sum_probs=93.1
Q ss_pred ccccccccccEEEEEEec--------CCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhccc
Q 002031 123 ETPLATASIAQVHRATLV--------DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPK 194 (977)
Q Consensus 123 ~~piasaSigqV~~A~l~--------~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ 194 (977)
.+.||+|++|.||+|+.. ++..||+|+.++..... +.
T Consensus 23 ~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~~aiK~~~~~~~~~---~~-------------------------------- 67 (307)
T cd05098 23 GKPLGEGCFGQVVMAEAIGLDKEKPNRVTKVAVKMLKSDATEK---DL-------------------------------- 67 (307)
T ss_pred eeeeccCCCeeEEEeEEeccCCcccCccceEEEEeccCCCChH---HH--------------------------------
Confidence 368999999999999852 23579999887643211 00
Q ss_pred ccCcHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeee-cCCceEEeeccCCCCCCChHHHHh-----------
Q 002031 195 ELDFNSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLEA----------- 262 (977)
Q Consensus 195 Eld~~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLVmE~i~G~~L~~~~~~~~----------- 262 (977)
-++..|...+.++.+. ..-+.+...+. ....++||||++|.+|.++.....
T Consensus 68 -~~~~~e~~~l~~l~~h----------------~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~ 130 (307)
T cd05098 68 -SDLISEMEMMKMIGKH----------------KNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYCYNPT 130 (307)
T ss_pred -HHHHHHHHHHHHhcCC----------------CCEeeEEEEEecCCceEEEEecCCCCcHHHHHHhcCCcccccccccc
Confidence 0123344444443210 01122222222 456789999999999987753221
Q ss_pred ----cCCCHHHHHHHHHHHH--HHHHHhcCccccCCCCCCeEEccCCCCceEEEecccccccC
Q 002031 263 ----FGVNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 319 (977)
Q Consensus 263 ----~~~~~~~l~~~l~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~ 319 (977)
..++...+...+.++. +..+|..|++|+|+||.||+++.+ +.++|+|||.+..+.
T Consensus 131 ~~~~~~l~~~~~~~~~~qi~~aL~~lH~~gi~H~dlkp~Nill~~~--~~~kL~dfg~a~~~~ 191 (307)
T cd05098 131 QVPEEQLSFKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTED--NVMKIADFGLARDIH 191 (307)
T ss_pred cCccccCCHHHHHHHHHHHHHHHHHHHHCCcccccccHHheEEcCC--CcEEECCCccccccc
Confidence 1234444555555544 788999999999999999999865 899999999987664
|
Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 1 (FGFR1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR1 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to |
| >cd05120 APH_ChoK_like Aminoglycoside 3'-phosphotransferase (APH) and Choline Kinase (ChoK) family | Back alignment and domain information |
|---|
Probab=99.07 E-value=1.1e-09 Score=107.48 Aligned_cols=131 Identities=18% Similarity=0.284 Sum_probs=91.3
Q ss_pred cccccccccEEEEEEecCCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCcHHHHH
Q 002031 124 TPLATASIAQVHRATLVDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEAE 203 (977)
Q Consensus 124 ~piasaSigqV~~A~l~~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea~ 203 (977)
++++.|+++.||+++.. +..++||+.++... +.++..|..
T Consensus 4 ~~i~~g~~~~v~~~~~~-~~~~~iK~~~~~~~---------------------------------------~~~~~~e~~ 43 (155)
T cd05120 4 KLLKGGLTNRVYLLGTK-DEDYVLKINPSREK---------------------------------------GADREREVA 43 (155)
T ss_pred eecccccccceEEEEec-CCeEEEEecCCCCc---------------------------------------hhHHHHHHH
Confidence 57899999999999974 48899998765421 113556666
Q ss_pred HHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeee----cCCceEEeeccCCCCCCChHHHHhcCCCHHHHHHHHHHHHH
Q 002031 204 NTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ----SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAYA 279 (977)
Q Consensus 204 n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~----~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~l 279 (977)
.+..+++. ...+|+++. .+..+++|||++|..+..... .....+...+.+. +
T Consensus 44 ~~~~l~~~------------------~~~~p~~~~~~~~~~~~~~v~e~~~g~~~~~~~~-----~~~~~~~~~~~~~-l 99 (155)
T cd05120 44 ILQLLARK------------------GLPVPKVLASGESDGWSYLLMEWIEGETLDEVSE-----EEKEDIAEQLAEL-L 99 (155)
T ss_pred HHHHHHHc------------------CCCCCeEEEEcCCCCccEEEEEecCCeecccCCH-----HHHHHHHHHHHHH-H
Confidence 67766652 234666664 245899999999988875400 0112233333333 5
Q ss_pred HHHHh---cCccccCCCCCCeEEccCCCCceEEEecccccccCH
Q 002031 280 HQIYV---DGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 320 (977)
Q Consensus 280 ~~i~~---~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 320 (977)
..+|. .|++|+|+||+||++++. +.++++|||.+...++
T Consensus 100 ~~lh~~~~~~i~H~Dl~~~Nil~~~~--~~~~l~Df~~~~~~~~ 141 (155)
T cd05120 100 AKLHQLPLLVLCHGDLHPGNILVDDG--KILGIIDWEYAGYGPP 141 (155)
T ss_pred HHHhCCCceEEEecCCCcceEEEECC--cEEEEEecccccCCCh
Confidence 56665 589999999999999854 7899999999886554
|
The APH/ChoK family is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). The family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides and macrolides, leads to their inactivation and to bacterial antibiotic resistance. Phosphorylation of choline, ethanolamine, and homoserine serves |
| >cd05042 PTKc_Aatyk Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases | Back alignment and domain information |
|---|
Probab=99.07 E-value=4.5e-10 Score=122.67 Aligned_cols=78 Identities=18% Similarity=0.103 Sum_probs=56.3
Q ss_pred cCCceEEeeccCCCCCCChHHHHhcC----CCHHHHHHHHHHHH--HHHHHhcCccccCCCCCCeEEccCCCCceEEEec
Q 002031 239 SSETVLILEFMDGIRLNDCESLEAFG----VNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDF 312 (977)
Q Consensus 239 ~~~~vLVmE~i~G~~L~~~~~~~~~~----~~~~~l~~~l~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDF 312 (977)
....+|||||++|.+|.++....... .+...+...+.++. +..+|..|++|+|+||.||+++.+ ++++|+||
T Consensus 67 ~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nill~~~--~~~kl~df 144 (269)
T cd05042 67 SIPYLLVLEFCPLGDLKNYLRSNRGMVAQMAQKDVLQRMACEVASGLLWLHQADFIHSDLALRNCQLTAD--LSVKIGDY 144 (269)
T ss_pred CCceEEEEEeCCCCcHHHHHHhccccccccccHHHHHHHHHHHHHHHHHHHhcCEecccccHhheEecCC--CcEEEecc
Confidence 45678999999999998764321111 12222333333333 678999999999999999999865 89999999
Q ss_pred cccccc
Q 002031 313 GLTKKL 318 (977)
Q Consensus 313 G~~~~l 318 (977)
|++...
T Consensus 145 g~~~~~ 150 (269)
T cd05042 145 GLALEQ 150 (269)
T ss_pred cccccc
Confidence 998654
|
Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase (Aatyk) subfamily; catalytic (c) domain. The Aatyk subfamily is also referred to as the lemur tyrosine kinase (Lmtk) subfamily. It consists of Aatyk1 (Lmtk1), Aatyk2 (Lmtk2, Brek), Aatyk3 (Lmtk3), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk proteins are mostly receptor tyr kinases (RTKs) containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 does not contain a transmembrane segment and is a cytoplasmic (or nonreceptor) kinase. Aatyk proteins are classified as tyr kina |
| >cd05060 PTKc_Syk_like Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=99.07 E-value=8.9e-10 Score=119.45 Aligned_cols=139 Identities=17% Similarity=0.166 Sum_probs=92.7
Q ss_pred ccccccccEEEEEEec--C--CCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCcHH
Q 002031 125 PLATASIAQVHRATLV--D--GRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNS 200 (977)
Q Consensus 125 piasaSigqV~~A~l~--~--G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~ 200 (977)
-||.|++|+||+|+.. + +..||+|+.+....... +-++.+
T Consensus 2 ~ig~G~~g~v~~~~~~~~~~~~~~~~iK~~~~~~~~~~------------------------------------~~~~~~ 45 (257)
T cd05060 2 ELGHGNFGSVVKGVYLMKSGKEVEVAVKTLKQEHIAAG------------------------------------KKEFLR 45 (257)
T ss_pred ccCccCceeEEEeEeeccCCCcceEEEEecccccchHH------------------------------------HHHHHH
Confidence 4899999999999863 2 37899998765422100 012333
Q ss_pred HHHHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeeecCCceEEeeccCCCCCCChHHHHhcCCCHHHHHHHHHHHH--
Q 002031 201 EAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQSSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY-- 278 (977)
Q Consensus 201 Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~-- 278 (977)
|...+.++.+ ..-+.+...+.....++||||++|.+|.++.... ...+...+...+.+++
T Consensus 46 e~~~l~~l~h-----------------~~iv~~~~~~~~~~~~~v~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~qi~~~ 107 (257)
T cd05060 46 EASVMAQLDH-----------------PCIVRLIGVCKGEPLMLVMELAPLGPLLKYLKKR-REIPVSDLKELAHQVAMG 107 (257)
T ss_pred HHHHHHhcCC-----------------CCeeeEEEEEcCCceEEEEEeCCCCcHHHHHHhC-CCCCHHHHHHHHHHHHHH
Confidence 4444443321 1112232333355678999999999988764322 2355555555555544
Q ss_pred HHHHHhcCccccCCCCCCeEEccCCCCceEEEecccccccC
Q 002031 279 AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 319 (977)
Q Consensus 279 l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~ 319 (977)
+..+|..|++|+|+||.||+++.+ +.++|+|||++..+.
T Consensus 108 l~~lh~~~i~H~di~p~nili~~~--~~~kl~df~~~~~~~ 146 (257)
T cd05060 108 MAYLESKHFVHRDLAARNVLLVNR--HQAKISDFGMSRALG 146 (257)
T ss_pred HHHHhhcCeeccCcccceEEEcCC--CcEEeccccccceee
Confidence 778899999999999999999865 899999999988664
|
Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, mi |
| >cd07841 STKc_CDK7 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7 | Back alignment and domain information |
|---|
Probab=99.07 E-value=3.7e-10 Score=125.31 Aligned_cols=145 Identities=19% Similarity=0.220 Sum_probs=93.0
Q ss_pred cccccccccEEEEEEec-CCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCcHHHH
Q 002031 124 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (977)
Q Consensus 124 ~piasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea 202 (977)
+.||.|++|+||+|..+ +|+.||||..+......-... .+-.+..|.
T Consensus 6 ~~lg~g~~~~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~--------------------------------~~~~~~~e~ 53 (298)
T cd07841 6 KKLGEGTYAVVYKARDKETGRIVAIKKIKLGERKEAKDG--------------------------------INFTALREI 53 (298)
T ss_pred eeeeeccccEEEEEEECCCCcEEEEEEEeccccccccch--------------------------------hhHHHHHHH
Confidence 46899999999999974 799999998765432100000 001123344
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeee-cCCceEEeeccCCCCCCChHHHHhcCCCHHHHHHHHHHHH--H
Q 002031 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--A 279 (977)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~--l 279 (977)
..+.++.+ ..-+.+...+. ....++||||+ +.+|.++.......++...+...+.+++ +
T Consensus 54 ~~l~~~~h-----------------~~i~~~~~~~~~~~~~~lv~e~~-~~~L~~~i~~~~~~~~~~~~~~~~~qi~~al 115 (298)
T cd07841 54 KLLQELKH-----------------PNIIGLLDVFGHKSNINLVFEFM-ETDLEKVIKDKSIVLTPADIKSYMLMTLRGL 115 (298)
T ss_pred HHHhhcCC-----------------CCChhhhheeecCCEEEEEEccc-CCCHHHHHhccCCCCCHHHHHHHHHHHHHHH
Confidence 44444321 00112222222 34568999999 7777666332111355555555555544 7
Q ss_pred HHHHhcCccccCCCCCCeEEccCCCCceEEEecccccccCH
Q 002031 280 HQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 320 (977)
Q Consensus 280 ~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 320 (977)
..+|..|++|+|++|.||+++.+ +.++|+|||++..+..
T Consensus 116 ~~lH~~~i~H~dl~p~nill~~~--~~~~l~dfg~~~~~~~ 154 (298)
T cd07841 116 EYLHSNWILHRDLKPNNLLIASD--GVLKLADFGLARSFGS 154 (298)
T ss_pred HHHHhCCeeecCCChhhEEEcCC--CCEEEccceeeeeccC
Confidence 78999999999999999999965 8999999999887643
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is |
| >cd05111 PTK_HER3 Pseudokinase domain of the Protein Tyrosine Kinase, HER3 | Back alignment and domain information |
|---|
Probab=99.07 E-value=7.4e-10 Score=121.95 Aligned_cols=80 Identities=14% Similarity=0.109 Sum_probs=61.5
Q ss_pred cCCceEEeeccCCCCCCChHHHHhcCCCHHHHHHHHHHHH--HHHHHhcCccccCCCCCCeEEccCCCCceEEEeccccc
Q 002031 239 SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTK 316 (977)
Q Consensus 239 ~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~ 316 (977)
....+++|||+++.+|.++.......++...+...+.++. +..+|..|++|+|+||.||+++.+ +.++|+|||+++
T Consensus 80 ~~~~~~i~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~dlkp~nili~~~--~~~kl~Dfg~~~ 157 (279)
T cd05111 80 GASLQLVTQLSPLGSLLDHVRQHRDSLDPQRLLNWCVQIAKGMYYLEEHRMVHRNLAARNILLKSD--SIVQIADFGVAD 157 (279)
T ss_pred CCccEEEEEeCCCCcHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCCEeccccCcceEEEcCC--CcEEEcCCccce
Confidence 4456799999999999887543333455555555555544 778999999999999999999855 899999999998
Q ss_pred ccCH
Q 002031 317 KLSS 320 (977)
Q Consensus 317 ~l~~ 320 (977)
.+.+
T Consensus 158 ~~~~ 161 (279)
T cd05111 158 LLYP 161 (279)
T ss_pred eccC
Confidence 6643
|
Protein Tyrosine Kinase (PTK) family; HER3 (ErbB3); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER3 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr r |
| >cd05578 STKc_Yank1 Catalytic domain of the Protein Serine/Threonine Kinase, Yank1 | Back alignment and domain information |
|---|
Probab=99.06 E-value=4.6e-10 Score=121.70 Aligned_cols=141 Identities=13% Similarity=0.150 Sum_probs=93.9
Q ss_pred cccccccccEEEEEEec-CCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCcHHHH
Q 002031 124 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (977)
Q Consensus 124 ~piasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea 202 (977)
++||.|++|.||+|+.. +|+.||+|+........ .+.. -++.+|.
T Consensus 6 ~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~----~~~~------------------------------~~~~~e~ 51 (258)
T cd05578 6 RVIGKGAFGKVCIVQKRDTKKMFAMKYMNKQKCVE----KGSV------------------------------RNVLNER 51 (258)
T ss_pred EEeccCCCceEEEEEEccCCcEEEEEEEehhhhcc----hhHH------------------------------HHHHHHH
Confidence 57999999999999985 69999999875321100 0000 0122333
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceee---e-cCCceEEeeccCCCCCCChHHHHhcCCCHHHHHHHHHHHH
Q 002031 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVI---Q-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY 278 (977)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~---~-~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~ 278 (977)
+.+.++.+ + .++.++ . ....++||||++|.+|.+..... ...+...+...+.+++
T Consensus 52 ~~l~~l~h------------------~--~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~-~~l~~~~~~~~~~~i~ 110 (258)
T cd05578 52 RILQELNH------------------P--FLVNLWYSFQDEENMYLVVDLLLGGDLRYHLSQK-VKFSEEQVKFWICEIV 110 (258)
T ss_pred HHHHhCCC------------------C--ChHHHHHhhcCCCeEEEEEeCCCCCCHHHHHHhc-CCcCHHHHHHHHHHHH
Confidence 33333211 0 112211 1 34568999999999998764322 2455666665555544
Q ss_pred --HHHHHhcCccccCCCCCCeEEccCCCCceEEEecccccccCHH
Q 002031 279 --AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSSS 321 (977)
Q Consensus 279 --l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~~ 321 (977)
+..+|..|++|+|++|.||+++.+ +.++|+|||.+..+...
T Consensus 111 ~~l~~lh~~~i~h~dl~~~nil~~~~--~~~~l~d~~~~~~~~~~ 153 (258)
T cd05578 111 LALEYLHSKGIIHRDIKPDNILLDEQ--GHVHITDFNIATKVTPD 153 (258)
T ss_pred HHHHHHHhCCeeccCCCHHHeEEcCC--CCEEEeecccccccCCC
Confidence 778999999999999999999865 89999999998776543
|
Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A. |
| >cd06639 STKc_myosinIIIB Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIB myosin | Back alignment and domain information |
|---|
Probab=99.06 E-value=9.2e-10 Score=121.76 Aligned_cols=141 Identities=16% Similarity=0.196 Sum_probs=91.4
Q ss_pred cccccccccEEEEEEe-cCCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCcHHHH
Q 002031 124 TPLATASIAQVHRATL-VDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (977)
Q Consensus 124 ~piasaSigqV~~A~l-~~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea 202 (977)
+.+++|++|.||+|+. .+|+.||||+..+.-.. . . .+.+|.
T Consensus 28 ~~l~~g~~~~vy~~~~~~~~~~~aik~~~~~~~~--~--------------------------~----------~~~~e~ 69 (291)
T cd06639 28 ETIGKGTYGKVYKVTNKKDGSLAAVKILDPISDV--D--------------------------E----------EIEAEY 69 (291)
T ss_pred EEeecCCCeEEEEEEECCCCCEEEEEEecccccH--H--------------------------H----------HHHHHH
Confidence 5799999999999997 47999999987542100 0 0 112333
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeee------cCCceEEeeccCCCCCCChHHH---HhcCCCHHHHHHH
Q 002031 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ------SSETVLILEFMDGIRLNDCESL---EAFGVNKQKVVEE 273 (977)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~------~~~~vLVmE~i~G~~L~~~~~~---~~~~~~~~~l~~~ 273 (977)
..+.++.+. ..-+.+-..+. ....++||||++|.+|.++... .........+...
T Consensus 70 ~~l~~l~~h----------------~ni~~~~~~~~~~~~~~~~~~~lv~ey~~~~sL~~~~~~~~~~~~~~~~~~~~~~ 133 (291)
T cd06639 70 NILQSLPNH----------------PNVVKFYGMFYKADKLVGGQLWLVLELCNGGSVTELVKGLLICGQRLDEAMISYI 133 (291)
T ss_pred HHHHHhcCC----------------CCeEEEEEEEEeccccCCCeeEEEEEECCCCcHHHHHHHhhhcCCCCCHHHHHHH
Confidence 333333110 01122222221 2346899999999999876431 1122344444444
Q ss_pred HHHHH--HHHHHhcCccccCCCCCCeEEccCCCCceEEEecccccccCH
Q 002031 274 ITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 320 (977)
Q Consensus 274 l~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 320 (977)
+.+++ +..+|..|++|+|+||+||+++.+ ++++|+|||++..+..
T Consensus 134 ~~qi~~al~~lH~~~ivH~dlkp~nili~~~--~~~kl~dfg~~~~~~~ 180 (291)
T cd06639 134 LYGALLGLQHLHNNRIIHRDVKGNNILLTTE--GGVKLVDFGVSAQLTS 180 (291)
T ss_pred HHHHHHHHHHHHhCCeeccCCCHHHEEEcCC--CCEEEeecccchhccc
Confidence 44433 788999999999999999999865 8899999999877643
|
Serine/threonine kinases (STKs), class IIIB myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. Class IIIB myosin is expressed highly in retina. It is also pre |
| >cd05110 PTKc_HER4 Catalytic domain of the Protein Tyrosine Kinase, HER4 | Back alignment and domain information |
|---|
Probab=99.06 E-value=6.9e-10 Score=123.77 Aligned_cols=80 Identities=19% Similarity=0.161 Sum_probs=59.1
Q ss_pred cCCceEEeeccCCCCCCChHHHHhcCCCHHHHHHHHHHHH--HHHHHhcCccccCCCCCCeEEccCCCCceEEEeccccc
Q 002031 239 SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTK 316 (977)
Q Consensus 239 ~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~ 316 (977)
.....++|||+++++|.+........+....+...+.++. +..+|..|++|+|+||.||+++.+ +.++|+|||++.
T Consensus 80 ~~~~~~v~e~~~~g~l~~~~~~~~~~~~~~~~~~~~~qi~~~L~~LH~~~ivH~dikp~Nill~~~--~~~kL~Dfg~~~ 157 (303)
T cd05110 80 SPTIQLVTQLMPHGCLLDYVHEHKDNIGSQLLLNWCVQIAKGMMYLEERRLVHRDLAARNVLVKSP--NHVKITDFGLAR 157 (303)
T ss_pred CCCceeeehhcCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHhhcCeeccccccceeeecCC--CceEEccccccc
Confidence 4456799999999888776432222344444444444433 778999999999999999999855 789999999998
Q ss_pred ccCH
Q 002031 317 KLSS 320 (977)
Q Consensus 317 ~l~~ 320 (977)
.+..
T Consensus 158 ~~~~ 161 (303)
T cd05110 158 LLEG 161 (303)
T ss_pred cccC
Confidence 7653
|
Protein Tyrosine Kinase (PTK) family; HER4 (ErbB4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER4 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as bindin |
| >cd08229 STKc_Nek7 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 7 | Back alignment and domain information |
|---|
Probab=99.06 E-value=4.4e-10 Score=122.41 Aligned_cols=143 Identities=18% Similarity=0.145 Sum_probs=91.1
Q ss_pred cccccccccEEEEEEe-cCCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCcHHHH
Q 002031 124 TPLATASIAQVHRATL-VDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (977)
Q Consensus 124 ~piasaSigqV~~A~l-~~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea 202 (977)
+.||+|++|+||+|+. .+|+.|+||.....-. .+.. ...++.+|.
T Consensus 8 ~~ig~g~~g~v~~~~~~~~~~~~~vK~~~~~~~----~~~~------------------------------~~~~~~~e~ 53 (267)
T cd08229 8 KKIGRGQFSEVYRATCLLDGVPVALKKVQIFDL----MDAK------------------------------ARADCIKEI 53 (267)
T ss_pred hhhcccCCeEEEEEeecCCCceEEEEeeeehhh----hhHH------------------------------HHHHHHHHH
Confidence 6799999999999996 5899999996542100 0000 001233444
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeee-cCCceEEeeccCCCCCCChHHHH---hcCCCHHHHHHHHHHHH
Q 002031 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLE---AFGVNKQKVVEEITRAY 278 (977)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLVmE~i~G~~L~~~~~~~---~~~~~~~~l~~~l~~~~ 278 (977)
+.+..+.+ ..-+.+-..+. ....+++|||++|.+|.++.... ....+...+...+.+++
T Consensus 54 ~~l~~~~h-----------------~~i~~~~~~~~~~~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~ 116 (267)
T cd08229 54 DLLKQLNH-----------------PNVIKYYASFIEDNELNIVLELADAGDLSRMIKHFKKQKRLIPEKTVWKYFVQLC 116 (267)
T ss_pred HHHHHccC-----------------CchhhhhheeEeCCeEEEEEEecCCCCHHHHHHHhhccCCCCCHHHHHHHHHHHH
Confidence 44443321 00011111111 34568999999999998764321 11234444444444443
Q ss_pred --HHHHHhcCccccCCCCCCeEEccCCCCceEEEecccccccC
Q 002031 279 --AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 319 (977)
Q Consensus 279 --l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~ 319 (977)
+..+|..|++|+|++|.||+++.+ +.++|+|||++..+.
T Consensus 117 ~~l~~LH~~~i~H~dl~p~nili~~~--~~~~l~dfg~~~~~~ 157 (267)
T cd08229 117 SALEHMHSRRVMHRDIKPANVFITAT--GVVKLGDLGLGRFFS 157 (267)
T ss_pred HHHHHHHHCCeecCCCCHHHEEEcCC--CCEEECcchhhhccc
Confidence 778999999999999999999855 889999999987654
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 7 (Nek7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek7 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase. |
| >cd06617 PKc_MKK3_6 Catalytic domain of the dual-specificity Protein Kinases, MAP kinase kinases 3 and 6 | Back alignment and domain information |
|---|
Probab=99.05 E-value=5.9e-10 Score=122.53 Aligned_cols=142 Identities=14% Similarity=0.189 Sum_probs=89.1
Q ss_pred cccccccccEEEEEEec-CCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCcHHHH
Q 002031 124 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (977)
Q Consensus 124 ~piasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea 202 (977)
+.||.|++|+||+|+.+ +|+.||||+.+....... +.++..|.
T Consensus 7 ~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~------------------------------------~~~~~~e~ 50 (283)
T cd06617 7 EELGRGAYGVVDKMRHVPTGTIMAVKRIRATVNSQE------------------------------------QKRLLMDL 50 (283)
T ss_pred EEecccCCeEEEEEEEcCCCcEEEEEEEecCCCcHH------------------------------------HHHHHHHH
Confidence 56999999999999975 799999998765432110 01111222
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeee-cCCceEEeeccCCCCCCChHHH---HhcCCCHHHHHHHHHHHH
Q 002031 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESL---EAFGVNKQKVVEEITRAY 278 (977)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLVmE~i~G~~L~~~~~~---~~~~~~~~~l~~~l~~~~ 278 (977)
....+. .. ....+.+...+. ....++||||++| +|.++... ....++...+...+.++.
T Consensus 51 ~~~~~~---~~-------------~~~iv~~~~~~~~~~~~~lv~e~~~~-~l~~~l~~~~~~~~~~~~~~~~~~~~qi~ 113 (283)
T cd06617 51 DISMRS---VD-------------CPYTVTFYGALFREGDVWICMEVMDT-SLDKFYKKVYDKGLTIPEDILGKIAVSIV 113 (283)
T ss_pred HHHHHH---cC-------------CCCeeeeeEEEecCCcEEEEhhhhcc-cHHHHHHHhccCCCCCCHHHHHHHHHHHH
Confidence 221111 11 011122222222 5667899999986 44443221 112344555555555544
Q ss_pred --HHHHHhc-CccccCCCCCCeEEccCCCCceEEEecccccccCH
Q 002031 279 --AHQIYVD-GFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 320 (977)
Q Consensus 279 --l~~i~~~-G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 320 (977)
+..+|.. |++|+|+||+||+++.+ +.++|+|||++..+..
T Consensus 114 ~~l~~lH~~~~i~h~dlkp~nil~~~~--~~~kl~dfg~~~~~~~ 156 (283)
T cd06617 114 KALEYLHSKLSVIHRDVKPSNVLINRN--GQVKLCDFGISGYLVD 156 (283)
T ss_pred HHHHHHhhcCCeecCCCCHHHEEECCC--CCEEEeeccccccccc
Confidence 7788887 99999999999999865 8999999999877643
|
Protein kinases (PKs), MAP kinase kinase 3 (MKK3) and MKK6 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK3 and MKK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK3 and MKK6 are dual-specificity PKs |
| >cd06622 PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS2-like dual-specificity MAP kinase kinases | Back alignment and domain information |
|---|
Probab=99.05 E-value=5.7e-10 Score=123.05 Aligned_cols=78 Identities=19% Similarity=0.258 Sum_probs=56.9
Q ss_pred CCceEEeeccCCCCCCChHHHH--hcCCCHHHHHHHHHHHH--HHHHHh-cCccccCCCCCCeEEccCCCCceEEEeccc
Q 002031 240 SETVLILEFMDGIRLNDCESLE--AFGVNKQKVVEEITRAY--AHQIYV-DGFFNGDPHPGNFLVSKDPPHRPILLDFGL 314 (977)
Q Consensus 240 ~~~vLVmE~i~G~~L~~~~~~~--~~~~~~~~l~~~l~~~~--l~~i~~-~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~ 314 (977)
...++||||++|.+|..+.... ...++...+...+.+++ +..+|. .|++|+|++|.||+++.+ +.++|+|||+
T Consensus 72 ~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~~i~H~dl~p~nil~~~~--~~~~l~dfg~ 149 (286)
T cd06622 72 GAVYMCMEYMDAGSLDKLYAGGVATEGIPEDVLRRITYAVVKGLKFLKEEHNIIHRDVKPTNVLVNGN--GQVKLCDFGV 149 (286)
T ss_pred CeEEEEEeecCCCCHHHHHHhccccCCCCHHHHHHHHHHHHHHHHHHHhcCCEeeCCCCHHHEEECCC--CCEEEeecCC
Confidence 4457999999999987663321 11345544444444433 667785 699999999999999865 8999999999
Q ss_pred ccccC
Q 002031 315 TKKLS 319 (977)
Q Consensus 315 ~~~l~ 319 (977)
+..+.
T Consensus 150 ~~~~~ 154 (286)
T cd06622 150 SGNLV 154 (286)
T ss_pred ccccc
Confidence 87653
|
Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal PBS2-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include |
| >cd06630 STKc_MEKK1 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1 | Back alignment and domain information |
|---|
Probab=99.05 E-value=6.9e-10 Score=120.87 Aligned_cols=147 Identities=15% Similarity=0.108 Sum_probs=94.9
Q ss_pred cccccccccEEEEEEe-cCCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCcHHHH
Q 002031 124 TPLATASIAQVHRATL-VDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (977)
Q Consensus 124 ~piasaSigqV~~A~l-~~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea 202 (977)
+.||.|++|+||+|+. .+|+.||||+.+........ +.+. .-++.+|+
T Consensus 6 ~~lg~g~~~~v~~~~~~~~~~~~alk~~~~~~~~~~~-~~~~------------------------------~~~~~~e~ 54 (268)
T cd06630 6 QQLGTGAFSSCYQARDVKTGTLMAVKQVTYVRNTSSE-QEEV------------------------------VEALRKEI 54 (268)
T ss_pred ceecCcCceEEEEEEEcCCCcEEEEEEeecccCCchh-HHHH------------------------------HHHHHHHH
Confidence 5689999999999986 58999999987643211100 0000 01234455
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeee-cCCceEEeeccCCCCCCChHHHHhcCCCHHHHHHHHHHHH--H
Q 002031 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--A 279 (977)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~--l 279 (977)
+.+.++++. .-+.+..++. ....++||||++|.+|.++... ...++...+...+.+++ +
T Consensus 55 ~~l~~l~h~-----------------~iv~~~~~~~~~~~~~~v~e~~~~~~L~~~l~~-~~~~~~~~~~~~~~ql~~al 116 (268)
T cd06630 55 RLMARLNHP-----------------HIIRMLGATCEDSHFNLFVEWMAGGSVSHLLSK-YGAFKEAVIINYTEQLLRGL 116 (268)
T ss_pred HHHHHcCCC-----------------ceehhhceeccCCeEEEEEeccCCCcHHHHHHH-hCCCCHHHHHHHHHHHHHHH
Confidence 555554320 0111222222 3456899999999999877432 22344444444444433 6
Q ss_pred HHHHhcCccccCCCCCCeEEccCCCCceEEEecccccccCH
Q 002031 280 HQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 320 (977)
Q Consensus 280 ~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 320 (977)
..+|..|++|+|++|.||+++.+ +..++|+|||.+..+..
T Consensus 117 ~~LH~~~i~H~~i~~~nil~~~~-~~~~~l~dfg~~~~~~~ 156 (268)
T cd06630 117 SYLHENQIIHRDVKGANLLIDST-GQRLRIADFGAAARLAA 156 (268)
T ss_pred HHHHhCCeecCCCCHHHEEEcCC-CCEEEEccccccccccc
Confidence 78999999999999999999754 23699999999887754
|
Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their |
| >cd07836 STKc_Pho85 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85 | Back alignment and domain information |
|---|
Probab=99.05 E-value=8.5e-10 Score=121.32 Aligned_cols=137 Identities=18% Similarity=0.193 Sum_probs=91.7
Q ss_pred cccccccccEEEEEEec-CCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCcHHHH
Q 002031 124 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (977)
Q Consensus 124 ~piasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea 202 (977)
+.||.|++|+||+|+.. +|+.||||+.+....... .-.+.+|+
T Consensus 6 ~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~------------------------------------~~~~~~E~ 49 (284)
T cd07836 6 EKLGEGTYATVYKGRNRTTGEIVALKEIHLDAEEGT------------------------------------PSTAIREI 49 (284)
T ss_pred eeeccCCceEEEEEEECCCCeEEEEEEecccccccc------------------------------------hHHHHHHH
Confidence 57899999999999985 799999998754321100 00123455
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeee----cCCceEEeeccCCCCCCChHHHHh--cCCCHHHHHHHHHH
Q 002031 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ----SSETVLILEFMDGIRLNDCESLEA--FGVNKQKVVEEITR 276 (977)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~----~~~~vLVmE~i~G~~L~~~~~~~~--~~~~~~~l~~~l~~ 276 (977)
..+.++.+ -.+++++. ....+|||||++| +|.++..... ..++...+...+.+
T Consensus 50 ~~l~~l~h--------------------~~i~~~~~~~~~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~q 108 (284)
T cd07836 50 SLMKELKH--------------------ENIVRLHDVIHTENKLMLVFEYMDK-DLKKYMDTHGVRGALDPNTVKSFTYQ 108 (284)
T ss_pred HHHHhhcC--------------------CCEeeeeeeEeeCCcEEEEEecCCc-cHHHHHHhcCCCCCcCHHHHHHHHHH
Confidence 55555432 12333332 4567999999997 5554432111 22455555555555
Q ss_pred HH--HHHHHhcCccccCCCCCCeEEccCCCCceEEEecccccccC
Q 002031 277 AY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 319 (977)
Q Consensus 277 ~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~ 319 (977)
++ +..+|..|++|+|++|.||+++.+ +.++|+|||++..+.
T Consensus 109 i~~~l~~lH~~~i~h~dl~p~ni~~~~~--~~~~l~d~g~~~~~~ 151 (284)
T cd07836 109 LLKGIAFCHENRVLHRDLKPQNLLINKR--GELKLADFGLARAFG 151 (284)
T ss_pred HHHHHHHHHHCCeeeCCCCHHHEEECCC--CcEEEeecchhhhhc
Confidence 44 778899999999999999999855 899999999987553
|
Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment. |
| >cd06610 STKc_OSR1_SPAK Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase | Back alignment and domain information |
|---|
Probab=99.05 E-value=8.6e-10 Score=119.81 Aligned_cols=142 Identities=16% Similarity=0.216 Sum_probs=93.8
Q ss_pred cccccccccEEEEEEec-CCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCcHHHH
Q 002031 124 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (977)
Q Consensus 124 ~piasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea 202 (977)
+.||.|++|+||+|... +|+.|+||+........ +.. ++.+|+
T Consensus 7 ~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~---~~~---------------------------------~~~~e~ 50 (267)
T cd06610 7 EVIGVGATAVVYAAICLPNNEKVAIKRIDLEKCQT---SVD---------------------------------ELRKEV 50 (267)
T ss_pred eeecCCCCeEEEEEEEcCCCcEEEEEEeccCCcch---HHH---------------------------------HHHHHH
Confidence 57999999999999964 78999999875321111 100 223444
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeee-cCCceEEeeccCCCCCCChHHHHh--cCCCHHHHHHHHHHHH-
Q 002031 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLEA--FGVNKQKVVEEITRAY- 278 (977)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLVmE~i~G~~L~~~~~~~~--~~~~~~~l~~~l~~~~- 278 (977)
..+..+.+ ...+.+...+. ....++|||+++|.+|.+...... ..++...+...+.+++
T Consensus 51 ~~l~~l~~-----------------~~i~~~~~~~~~~~~~~iv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ql~~ 113 (267)
T cd06610 51 QAMSQCNH-----------------PNVVKYYTSFVVGDELWLVMPYLSGGSLLDIMKSSYPRGGLDEAIIATVLKEVLK 113 (267)
T ss_pred HHHHhcCC-----------------CCEEEEEEEEeeCCEEEEEEeccCCCcHHHHHHHhcccCCCCHHHHHHHHHHHHH
Confidence 43333321 11122222222 456789999999999987754321 2345555444444443
Q ss_pred -HHHHHhcCccccCCCCCCeEEccCCCCceEEEecccccccCH
Q 002031 279 -AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 320 (977)
Q Consensus 279 -l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 320 (977)
+..+|..|++|+|++|.||+++++ +.++|+|||++..+..
T Consensus 114 al~~lh~~~i~h~~l~p~ni~~~~~--~~~~l~df~~~~~~~~ 154 (267)
T cd06610 114 GLEYLHSNGQIHRDIKAGNILLGED--GSVKIADFGVSASLAD 154 (267)
T ss_pred HHHHHHhCCeecCCCCHHhEEEcCC--CCEEEcccchHHHhcc
Confidence 678899999999999999999865 7899999999877654
|
Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1 |
| >cd05095 PTKc_DDR2 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 2 | Back alignment and domain information |
|---|
Probab=99.05 E-value=8.9e-10 Score=122.35 Aligned_cols=79 Identities=23% Similarity=0.259 Sum_probs=57.9
Q ss_pred cCCceEEeeccCCCCCCChHHHHhc----------CCCHHHHHHHHHHHH--HHHHHhcCccccCCCCCCeEEccCCCCc
Q 002031 239 SSETVLILEFMDGIRLNDCESLEAF----------GVNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHR 306 (977)
Q Consensus 239 ~~~~vLVmE~i~G~~L~~~~~~~~~----------~~~~~~l~~~l~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~ 306 (977)
....++||||++|.+|.++...... .++...+...+.++. +..+|..|++|+|+||.||+++.+ +.
T Consensus 91 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~i~H~dlkp~Nili~~~--~~ 168 (296)
T cd05095 91 SDPLCMITEYMENGDLNQFLSRHEPQEAAEKADVVTISYSTLIFMATQIASGMKYLSSLNFVHRDLATRNCLVGKN--YT 168 (296)
T ss_pred CCccEEEEEeCCCCcHHHHHHhcCcccccccccccccCHHHHHHHHHHHHHHHHHHHHCCeecccCChheEEEcCC--CC
Confidence 4567899999999999876432111 122233444444433 788999999999999999999855 88
Q ss_pred eEEEecccccccC
Q 002031 307 PILLDFGLTKKLS 319 (977)
Q Consensus 307 i~LiDFG~~~~l~ 319 (977)
++|+|||++..+.
T Consensus 169 ~~l~dfg~~~~~~ 181 (296)
T cd05095 169 IKIADFGMSRNLY 181 (296)
T ss_pred EEeccCccccccc
Confidence 9999999987653
|
Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 2 (DDR2) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR2 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR2 binds mostly to fibrillar collagens. More recently, it has been reported to also bind collagen X. DDR2 is widely expressed in many tissues wit |
| >cd06623 PKc_MAPKK_plant_like Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins | Back alignment and domain information |
|---|
Probab=99.04 E-value=1.1e-09 Score=118.71 Aligned_cols=141 Identities=18% Similarity=0.183 Sum_probs=97.1
Q ss_pred cccccccccEEEEEEec-CCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCcHHHH
Q 002031 124 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (977)
Q Consensus 124 ~piasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea 202 (977)
+.||.|++|.||+|+.+ +|+.|+||+.++....... -++.+|.
T Consensus 7 ~~i~~g~~~~v~~~~~~~~~~~~~vk~~~~~~~~~~~------------------------------------~~~~~e~ 50 (264)
T cd06623 7 KVLGQGSSGVVYKVRHKPTGKIYALKKIHVDGDEEFR------------------------------------KQLLREL 50 (264)
T ss_pred eeeeecCCeEEEEEEEcCCCcEEEEEEeccCcchHHH------------------------------------HHHHHHH
Confidence 67999999999999985 6999999987654321000 0233444
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeee-cCCceEEeeccCCCCCCChHHHHhcCCCHHHHHHHHHHHH--H
Q 002031 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--A 279 (977)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~--l 279 (977)
+.+.++++ ..-+.+...+. ....++||||++|.+|.++.... ..++...+...+.+++ +
T Consensus 51 ~~l~~l~~-----------------~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~-~~l~~~~~~~~~~~l~~~l 112 (264)
T cd06623 51 KTLRSCES-----------------PYVVKCYGAFYKEGEISIVLEYMDGGSLADLLKKV-GKIPEPVLAYIARQILKGL 112 (264)
T ss_pred HHHHhcCC-----------------CCeeeEEEEEccCCeEEEEEEecCCCcHHHHHHHc-CCCCHHHHHHHHHHHHHHH
Confidence 44444431 11122222222 45678999999999998874322 3455555555544444 7
Q ss_pred HHHHh-cCccccCCCCCCeEEccCCCCceEEEecccccccCH
Q 002031 280 HQIYV-DGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 320 (977)
Q Consensus 280 ~~i~~-~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 320 (977)
..+|. .|++|+|+||.||+++.+ +.++|+|||.+..+..
T Consensus 113 ~~lh~~~~~~H~~l~~~ni~~~~~--~~~~l~df~~~~~~~~ 152 (264)
T cd06623 113 DYLHTKRHIIHRDIKPSNLLINSK--GEVKIADFGISKVLEN 152 (264)
T ss_pred HHHhccCCCccCCCCHHHEEECCC--CCEEEccCccceeccc
Confidence 78999 999999999999999865 8999999999887643
|
Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of |
| >cd05091 PTKc_Ror2 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 2 | Back alignment and domain information |
|---|
Probab=99.04 E-value=8.5e-10 Score=121.43 Aligned_cols=80 Identities=14% Similarity=0.172 Sum_probs=58.3
Q ss_pred cCCceEEeeccCCCCCCChHHHHh---------------cCCCHHHHHHHHHHHH--HHHHHhcCccccCCCCCCeEEcc
Q 002031 239 SSETVLILEFMDGIRLNDCESLEA---------------FGVNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSK 301 (977)
Q Consensus 239 ~~~~vLVmE~i~G~~L~~~~~~~~---------------~~~~~~~l~~~l~~~~--l~~i~~~G~~H~D~hPgNIlv~~ 301 (977)
....++++||+++.+|.++..... ..++...+...+.++. +..+|..|++|+|+||.||++++
T Consensus 80 ~~~~~~~~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ql~~aL~~lH~~gi~H~dlkp~Nil~~~ 159 (283)
T cd05091 80 EQPLSMIFSYCSHSDLHEFLVMRSPHSDVGSTDDDKTVKSTLEPADFVHIVTQIAAGMEFLSSHHVVHKDLATRNVLVFD 159 (283)
T ss_pred CCceEEEEEcCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHHcCccccccchhheEecC
Confidence 355689999999988877643221 1123333444444433 78899999999999999999986
Q ss_pred CCCCceEEEecccccccCH
Q 002031 302 DPPHRPILLDFGLTKKLSS 320 (977)
Q Consensus 302 ~~~g~i~LiDFG~~~~l~~ 320 (977)
+ +.++|+|||+++.+..
T Consensus 160 ~--~~~kl~Dfg~~~~~~~ 176 (283)
T cd05091 160 K--LNVKISDLGLFREVYA 176 (283)
T ss_pred C--CceEeccccccccccc
Confidence 5 8899999999887643
|
Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 2 (Ror2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly |
| >cd06614 STKc_PAK Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase | Back alignment and domain information |
|---|
Probab=99.04 E-value=1e-09 Score=121.15 Aligned_cols=148 Identities=18% Similarity=0.212 Sum_probs=99.8
Q ss_pred hhhcccccCccccccccccEEEEEEec-CCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhc
Q 002031 114 MGGMFMDFVETPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEA 192 (977)
Q Consensus 114 ~~~~f~~~d~~piasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l 192 (977)
..+.|+.. +.++.|++|+||+|... +++.|++|+.+.... +
T Consensus 17 ~~~~~~~~--~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~-----~------------------------------- 58 (286)
T cd06614 17 PRELYKNL--EKIGEGASGEVYKATDRATGKEVAIKKMRLRKQ-----N------------------------------- 58 (286)
T ss_pred ccccchHh--HhccCCCCeEEEEEEEccCCcEEEEEEEecCch-----h-------------------------------
Confidence 34444433 67999999999999985 789999998765432 0
Q ss_pred ccccCcHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeee-cCCceEEeeccCCCCCCChHHHHhcCCCHHHHH
Q 002031 193 PKELDFNSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVV 271 (977)
Q Consensus 193 ~~Eld~~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~ 271 (977)
+-.+.+|...+.++.+ ..-+.+...+. ....+++|||++|.+|.++.......++...+.
T Consensus 59 --~~~~~~e~~~l~~l~~-----------------~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~l~~~~~~ 119 (286)
T cd06614 59 --KELIINEILIMKDCKH-----------------PNIVDYYDSYLVGDELWVVMEYMDGGSLTDIITQNFVRMNEPQIA 119 (286)
T ss_pred --HHHHHHHHHHHHHCCC-----------------CCeeEEEEEEEECCEEEEEEeccCCCcHHHHHHHhccCCCHHHHH
Confidence 0012234333333321 11122333332 566789999999999998754332245555555
Q ss_pred HHHHHHH--HHHHHhcCccccCCCCCCeEEccCCCCceEEEecccccccCH
Q 002031 272 EEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 320 (977)
Q Consensus 272 ~~l~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 320 (977)
..+.+++ +..+|..|++|+|++|.||+++.+ +.++|+|||.+..+..
T Consensus 120 ~i~~~i~~~L~~lH~~gi~H~dl~p~ni~i~~~--~~~~l~d~~~~~~~~~ 168 (286)
T cd06614 120 YVCREVLQGLEYLHSQNVIHRDIKSDNILLSKD--GSVKLADFGFAAQLTK 168 (286)
T ss_pred HHHHHHHHHHHHHHhCCeeeCCCChhhEEEcCC--CCEEECccchhhhhcc
Confidence 5555544 778899999999999999999855 8999999998876544
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two grou |
| >cd05574 STKc_phototropin_like Catalytic domain of Phototropin-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.04 E-value=7.4e-10 Score=124.15 Aligned_cols=141 Identities=16% Similarity=0.188 Sum_probs=93.3
Q ss_pred cccccccccEEEEEEec-CCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCcHHHH
Q 002031 124 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (977)
Q Consensus 124 ~piasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea 202 (977)
+.||.|++|.||+|+.. +|+.||||...+...... ... -.+..|.
T Consensus 7 ~~ig~g~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~-~~~---------------------------------~~~~~e~ 52 (316)
T cd05574 7 KLLGKGDVGRVFLVRLKGTGKLFALKVLDKKEMIKR-NKV---------------------------------KRVLTEQ 52 (316)
T ss_pred eeecCCccEEEEEEEEcCCCcEEEEEEEeccccchH-HHH---------------------------------HHHHHHH
Confidence 56999999999999975 599999998764321100 000 0123344
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeee----cCCceEEeeccCCCCCCChHHHHh-cCCCHHHHHHHHHHH
Q 002031 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ----SSETVLILEFMDGIRLNDCESLEA-FGVNKQKVVEEITRA 277 (977)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~----~~~~vLVmE~i~G~~L~~~~~~~~-~~~~~~~l~~~l~~~ 277 (977)
+.+.++.+ ..|++++. ....++||||++|.+|.++..... ..++...+...+.++
T Consensus 53 ~~l~~l~~--------------------~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~l~~~~~~~~~~qi 112 (316)
T cd05574 53 EILATLDH--------------------PFLPTLYASFQTETYLCLVMDYCPGGELFRLLQRQPGKCLSEEVARFYAAEV 112 (316)
T ss_pred HHHHhCCC--------------------CCchhheeeeecCCEEEEEEEecCCCCHHHHHHhCCCCccCHHHHHHHHHHH
Confidence 44443321 12333332 455689999999999987643211 234444444444443
Q ss_pred H--HHHHHhcCccccCCCCCCeEEccCCCCceEEEecccccccCH
Q 002031 278 Y--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 320 (977)
Q Consensus 278 ~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 320 (977)
+ +..+|..|++|+|+||.||+++.+ +.++|+|||++.....
T Consensus 113 ~~~l~~lH~~~i~H~dlkp~Nili~~~--~~~~l~dfg~~~~~~~ 155 (316)
T cd05574 113 LLALEYLHLLGIVYRDLKPENILLHES--GHIMLSDFDLSKQSDV 155 (316)
T ss_pred HHHHHHHHHCCeeccCCChHHeEEcCC--CCEEEeecchhhcccc
Confidence 3 678899999999999999999865 8999999999876643
|
Serine/Threonine Kinases (STKs), Phototropin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The phototropin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Included in this subfamily are plant phototropins and predominantly uncharacterized fungal STKs whose catalytic domains resemble the phototropin kinase domain. One protein from Neurospora crassa is called nrc-2. Phototropins are blue-light receptors that control responses such as phototropism, stromatal opening, and chloroplast movement in order to optimize the photosynthetic efficiency of plants. They are light-activated STKs that contain an N-termin |
| >cd06633 STKc_TAO3 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3 | Back alignment and domain information |
|---|
Probab=99.04 E-value=8.8e-10 Score=123.64 Aligned_cols=153 Identities=17% Similarity=0.164 Sum_probs=96.9
Q ss_pred hCCChhhcccccCccccccccccEEEEEEec-CCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHH
Q 002031 110 FGESMGGMFMDFVETPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEW 188 (977)
Q Consensus 110 lg~~~~~~f~~~d~~piasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~ 188 (977)
++.+++++|..+. .+|.|++|.||+|+.. +|+.|+||+........- ..
T Consensus 15 ~~~~~~~~~~~~~--~lg~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~~~-~~--------------------------- 64 (313)
T cd06633 15 YKDDPEEIFVGLH--EIGHGSFGAVYFATNSHTNEVVAVKKMSYSGKQTN-EK--------------------------- 64 (313)
T ss_pred ccCCHHHHhhcce--eeccCCCeEEEEEEECCCCcEEEEEEEeccccCch-HH---------------------------
Confidence 3467777776654 4999999999999974 789999998753211000 00
Q ss_pred hhhcccccCcHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeee-cCCceEEeeccCCCCCCChHHHHhcCCCH
Q 002031 189 CKEAPKELDFNSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAFGVNK 267 (977)
Q Consensus 189 ~~~l~~Eld~~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLVmE~i~G~~L~~~~~~~~~~~~~ 267 (977)
..++.+|...+.++++ ..-+.+..++. ....++||||+.| ++.+........++.
T Consensus 65 ------~~~~~~E~~~l~~l~h-----------------~~iv~~~~~~~~~~~~~lv~e~~~~-~l~~~l~~~~~~l~~ 120 (313)
T cd06633 65 ------WQDIIKEVKFLQQLKH-----------------PNTIEYKGCYLKEHTAWLVMEYCLG-SASDLLEVHKKPLQE 120 (313)
T ss_pred ------HHHHHHHHHHHHhCCC-----------------CCCccEEEEEEeCCEEEEEEecCCC-CHHHHHHhcCCCCCH
Confidence 0023344444444422 11122233332 4557899999976 444433222233455
Q ss_pred HHHHHHHHHHH--HHHHHhcCccccCCCCCCeEEccCCCCceEEEeccccccc
Q 002031 268 QKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKL 318 (977)
Q Consensus 268 ~~l~~~l~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l 318 (977)
..+...+.+++ +..+|..|++|+|++|.||+++.+ +.++|+|||++...
T Consensus 121 ~~~~~~~~qi~~al~~LH~~gi~H~dl~p~nili~~~--~~~kL~dfg~~~~~ 171 (313)
T cd06633 121 VEIAAITHGALQGLAYLHSHNMIHRDIKAGNILLTEP--GQVKLADFGSASKS 171 (313)
T ss_pred HHHHHHHHHHHHHHHHHHHCCeecCCCChhhEEECCC--CCEEEeecCCCccc
Confidence 55544444433 678899999999999999999865 88999999987643
|
Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a co |
| >KOG1166 consensus Mitotic checkpoint serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=99.04 E-value=5.6e-10 Score=137.23 Aligned_cols=141 Identities=20% Similarity=0.208 Sum_probs=91.7
Q ss_pred cccccccccEEEEEEecCCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCcHHHHH
Q 002031 124 TPLATASIAQVHRATLVDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEAE 203 (977)
Q Consensus 124 ~piasaSigqV~~A~l~~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea~ 203 (977)
+-+|.||+|+||+|+..+|+.|||||++|-..-.+-.=.+++.+|. ..+..
T Consensus 704 ~e~G~g~y~~vy~a~~~~~~~~alK~e~P~~~WEfYI~~q~~~RLk-----------------------------~~~~~ 754 (974)
T KOG1166|consen 704 KEIGEGSYGSVYVATHSNGKLVALKVEKPPNPWEFYICLQVMERLK-----------------------------PQMLP 754 (974)
T ss_pred eeeccccceEEEEeecCCCcEEEEEeecCCCceeeeehHHHHHhhc-----------------------------hhhhc
Confidence 6799999999999998889999999999865432221112111111 00001
Q ss_pred HHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeeecCCceEEeeccCCCCCCChHHHHhcCCCHHHHHHHHHHHH--HHH
Q 002031 204 NTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQSSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--AHQ 281 (977)
Q Consensus 204 n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~--l~~ 281 (977)
-+..+...+ + ..+.-+||+||.+=++|-|+.. .....+..-++-..++++ +++
T Consensus 755 ~~~~~~~a~-----------------------~-~~~~S~lv~ey~~~Gtlld~~N-~~~~m~e~lv~~~~~qml~ive~ 809 (974)
T KOG1166|consen 755 SIMHISSAH-----------------------V-FQNASVLVSEYSPYGTLLDLIN-TNKVMDEYLVMFFSCQMLRIVEH 809 (974)
T ss_pred chHHHHHHH-----------------------c-cCCcceeeeeccccccHHHhhc-cCCCCCchhhhHHHHHHHHHHHH
Confidence 111111111 0 1455689999999889888743 223344444444445544 899
Q ss_pred HHhcCccccCCCCCCeEEccC-----CCCceEEEeccccccc
Q 002031 282 IYVDGFFNGDPHPGNFLVSKD-----PPHRPILLDFGLTKKL 318 (977)
Q Consensus 282 i~~~G~~H~D~hPgNIlv~~~-----~~g~i~LiDFG~~~~l 318 (977)
||..||||+||||.|+|++.. +..-|.|||||.+-.+
T Consensus 810 lH~~~IIHgDiKPDNfll~~~~~~~~~~~~l~lIDfG~siDm 851 (974)
T KOG1166|consen 810 LHAMGIIHGDIKPDNFLLRREICADSDSKGLYLIDFGRSIDM 851 (974)
T ss_pred HHhcceecccCCcceeEeecccCCCCcccceEEEecccceee
Confidence 999999999999999999742 1235899999986544
|
|
| >cd07850 STKc_JNK Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase | Back alignment and domain information |
|---|
Probab=99.04 E-value=7.1e-10 Score=126.61 Aligned_cols=74 Identities=22% Similarity=0.446 Sum_probs=54.8
Q ss_pred CceEEeeccCCCCCCChHHHHhcCCCHHHHHHHHHHHH--HHHHHhcCccccCCCCCCeEEccCCCCceEEEeccccccc
Q 002031 241 ETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKL 318 (977)
Q Consensus 241 ~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l 318 (977)
..++||||++| +|.+.. . ..++...+...+.+++ +..+|..|++|+|+||+||+++.+ +.++|+|||++..+
T Consensus 95 ~~~lv~e~~~~-~l~~~~--~-~~l~~~~~~~~~~ql~~aL~~LH~~gi~H~dlkp~Nil~~~~--~~~kL~Dfg~~~~~ 168 (353)
T cd07850 95 DVYLVMELMDA-NLCQVI--Q-MDLDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSD--CTLKILDFGLARTA 168 (353)
T ss_pred cEEEEEeccCC-CHHHHH--h-hcCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHEEECCC--CCEEEccCccceeC
Confidence 35899999986 444332 1 1245555544444443 788999999999999999999865 89999999999876
Q ss_pred CH
Q 002031 319 SS 320 (977)
Q Consensus 319 ~~ 320 (977)
..
T Consensus 169 ~~ 170 (353)
T cd07850 169 GT 170 (353)
T ss_pred CC
Confidence 43
|
Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase (JNK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. They are also essential regulators of physiological and pathological processes and are involved in the pathogenesis of several diseases such as diabetes, atherosclerosis, stroke, Parkinson's and Alzheimer's. Vetebrates harbor three different JNK |
| >cd06607 STKc_TAO Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins | Back alignment and domain information |
|---|
Probab=99.04 E-value=8.5e-10 Score=123.25 Aligned_cols=151 Identities=17% Similarity=0.141 Sum_probs=94.1
Q ss_pred ChhhcccccCccccccccccEEEEEEec-CCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhh
Q 002031 113 SMGGMFMDFVETPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKE 191 (977)
Q Consensus 113 ~~~~~f~~~d~~piasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~ 191 (977)
.+.+.|... +.+|.|++|.||+|+.. +|+.||||+......... +
T Consensus 12 ~~~~~y~~~--~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~~~~~~---------------------------~----- 57 (307)
T cd06607 12 DPEKLFTDL--REIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSN---------------------------E----- 57 (307)
T ss_pred Ccchhhhhh--eeecCCCCeEEEEEEEcCCCcEEEEEEEeccccCcH---------------------------H-----
Confidence 344455543 46999999999999974 799999997642211000 0
Q ss_pred cccccCcHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeee-cCCceEEeeccCCCCCCChHHHHhcCCCHHHH
Q 002031 192 APKELDFNSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAFGVNKQKV 270 (977)
Q Consensus 192 l~~Eld~~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l 270 (977)
..-++.+|...+..+.+ ...+.+...+. ....+|||||++|. +.+.........+...+
T Consensus 58 --~~~~~~~Ei~~l~~l~h-----------------~niv~~~~~~~~~~~~~lv~e~~~g~-l~~~~~~~~~~l~~~~~ 117 (307)
T cd06607 58 --KWQDIIKEVRFLQQLRH-----------------PNTIEYKGCYLREHTAWLVMEYCLGS-ASDILEVHKKPLQEVEI 117 (307)
T ss_pred --HHHHHHHHHHHHHhCCC-----------------CCEEEEEEEEEeCCeEEEEHHhhCCC-HHHHHHHcccCCCHHHH
Confidence 00023344444444321 11233333333 45678999999873 33332222223455554
Q ss_pred HHHHHHHH--HHHHHhcCccccCCCCCCeEEccCCCCceEEEecccccccC
Q 002031 271 VEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 319 (977)
Q Consensus 271 ~~~l~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~ 319 (977)
...+.++. +..+|..|++|+|++|.||+++.+ +.++|+|||++...+
T Consensus 118 ~~~~~ql~~~L~~LH~~~i~H~dl~p~nIl~~~~--~~~kL~dfg~~~~~~ 166 (307)
T cd06607 118 AAICHGALQGLAYLHSHERIHRDIKAGNILLTEP--GTVKLADFGSASLVS 166 (307)
T ss_pred HHHHHHHHHHHHHHHHCCceecCCCcccEEECCC--CCEEEeecCcceecC
Confidence 44444433 778899999999999999999865 899999999987654
|
Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily |
| >PHA03207 serine/threonine kinase US3; Provisional | Back alignment and domain information |
|---|
Probab=99.04 E-value=5.4e-10 Score=129.55 Aligned_cols=134 Identities=16% Similarity=0.189 Sum_probs=87.6
Q ss_pred cccccccccEEEEEEec---CCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCcHH
Q 002031 124 TPLATASIAQVHRATLV---DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNS 200 (977)
Q Consensus 124 ~piasaSigqV~~A~l~---~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~ 200 (977)
+.||.|++|.||+|+.+ +++.||||+...+. .+.+
T Consensus 98 ~~Lg~G~~g~Vy~~~~~~~~~~~~v~vK~~~~~~------------------------------------------~~~~ 135 (392)
T PHA03207 98 SSLTPGSEGEVFVCTKHGDEQRKKVIVKAVTGGK------------------------------------------TPGR 135 (392)
T ss_pred EeecCCCCeEEEEEEEcCCccceeEEEEeccccc------------------------------------------cHHH
Confidence 67999999999999863 46889999764321 1123
Q ss_pred HHHHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeee-cCCceEEeeccCCCCCCChHHHHhcCCCHHHHHHHHHHHH-
Q 002031 201 EAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY- 278 (977)
Q Consensus 201 Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~- 278 (977)
|.+.+.++.+ ...+.+-..+. ....++|||++.| .|.+... ....+....+...+.+++
T Consensus 136 E~~il~~l~h-----------------~~iv~~~~~~~~~~~~~lv~e~~~~-~l~~~l~-~~~~l~~~~~~~i~~ql~~ 196 (392)
T PHA03207 136 EIDILKTISH-----------------RAIINLIHAYRWKSTVCMVMPKYKC-DLFTYVD-RSGPLPLEQAITIQRRLLE 196 (392)
T ss_pred HHHHHHhcCC-----------------CCccceeeeEeeCCEEEEEehhcCC-CHHHHHH-hcCCCCHHHHHHHHHHHHH
Confidence 4444444322 00111112222 4456899999975 3433321 223345555555555544
Q ss_pred -HHHHHhcCccccCCCCCCeEEccCCCCceEEEecccccccCH
Q 002031 279 -AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 320 (977)
Q Consensus 279 -l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 320 (977)
+..+|..|++|||+||.|||++.+ +.++|+|||++..+..
T Consensus 197 aL~~LH~~givHrDlkp~Nill~~~--~~~~l~DfG~a~~~~~ 237 (392)
T PHA03207 197 ALAYLHGRGIIHRDVKTENIFLDEP--ENAVLGDFGAACKLDA 237 (392)
T ss_pred HHHHHHHCCccccCCCHHHEEEcCC--CCEEEccCccccccCc
Confidence 788999999999999999999865 8999999999876643
|
|
| >PLN03224 probable serine/threonine protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.04 E-value=1.2e-09 Score=128.89 Aligned_cols=77 Identities=18% Similarity=0.255 Sum_probs=54.3
Q ss_pred CCceEEeeccCCCCCCChHHHHhc-----------------------CCCHHHHHHHHHHHH--HHHHHhcCccccCCCC
Q 002031 240 SETVLILEFMDGIRLNDCESLEAF-----------------------GVNKQKVVEEITRAY--AHQIYVDGFFNGDPHP 294 (977)
Q Consensus 240 ~~~vLVmE~i~G~~L~~~~~~~~~-----------------------~~~~~~l~~~l~~~~--l~~i~~~G~~H~D~hP 294 (977)
...+|||||+++.+|.++...... ..+...+...+.++. +..+|..|++|+|+||
T Consensus 258 ~~~~LV~Ey~~~gsL~~~L~~~~~~~~~~L~e~l~~g~~l~~~~~~~~~~~~~~~~i~~ql~~aL~~lH~~~ivHrDLKp 337 (507)
T PLN03224 258 GSQWLVWKFESDATLGDALDGKLGPFPGCLEEFMMAGKKIPDNMPQDKRDINVIKGVMRQVLTGLRKLHRIGIVHRDIKP 337 (507)
T ss_pred CceEEEEEcCCCCcHHHHHhhccCCCcchHHHHHhcCCchhhhcccccCCHHHHHHHHHHHHHHHHHHHHCCeecCCCch
Confidence 456899999999998776431100 011122222222322 6788999999999999
Q ss_pred CCeEEccCCCCceEEEeccccccc
Q 002031 295 GNFLVSKDPPHRPILLDFGLTKKL 318 (977)
Q Consensus 295 gNIlv~~~~~g~i~LiDFG~~~~l 318 (977)
.|||++.+ +.++|+|||++..+
T Consensus 338 ~NILl~~~--~~~kL~DFGla~~~ 359 (507)
T PLN03224 338 ENLLVTVD--GQVKIIDFGAAVDM 359 (507)
T ss_pred HhEEECCC--CcEEEEeCcCcccc
Confidence 99999865 88999999998654
|
|
| >cd06626 STKc_MEKK4 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4 | Back alignment and domain information |
|---|
Probab=99.04 E-value=7.9e-10 Score=119.98 Aligned_cols=139 Identities=14% Similarity=0.178 Sum_probs=92.5
Q ss_pred cccccccccEEEEEEec-CCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCcHHHH
Q 002031 124 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (977)
Q Consensus 124 ~piasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea 202 (977)
+.||+|++|.||+|+.. +++.|+||+.+..... ..+.+ .+..|.
T Consensus 6 ~~lg~G~~~~v~~~~~~~~~~~~~ik~~~~~~~~--~~~~~---------------------------------~~~~e~ 50 (264)
T cd06626 6 NKIGGGTFGKVYTAVNLDTGELMAVKEIRIQDND--PKTIK---------------------------------EIADEM 50 (264)
T ss_pred eEeecCCCcEEEEEEECCCCcEEEEEEEECcccc--hHHHH---------------------------------HHHHHH
Confidence 67999999999999974 7899999997654321 00000 123333
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceee---e-cCCceEEeeccCCCCCCChHHHHhcCCCHHHHHHHHHHHH
Q 002031 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVI---Q-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY 278 (977)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~---~-~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~ 278 (977)
..+.++++ ..|.+++ . ....++||||++|.+|.++.... ...+...+...+.+++
T Consensus 51 ~~~~~l~~--------------------~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~-~~~~~~~~~~i~~~i~ 109 (264)
T cd06626 51 KVLELLKH--------------------PNLVKYYGVEVHREKVYIFMEYCSGGTLEELLEHG-RILDEHVIRVYTLQLL 109 (264)
T ss_pred HHHHhCCC--------------------CChhheeeeEecCCEEEEEEecCCCCcHHHHHhhc-CCCChHHHHHHHHHHH
Confidence 33333321 1122222 1 45568999999999998874321 1234444444333333
Q ss_pred --HHHHHhcCccccCCCCCCeEEccCCCCceEEEecccccccCH
Q 002031 279 --AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 320 (977)
Q Consensus 279 --l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 320 (977)
+..+|..|++|+|++|+||+++.+ +.++|+|||.+..+..
T Consensus 110 ~~l~~lh~~~i~H~dl~~~nil~~~~--~~~kl~d~g~~~~~~~ 151 (264)
T cd06626 110 EGLAYLHSHGIVHRDIKPANIFLDHN--GVIKLGDFGCAVKLKN 151 (264)
T ss_pred HHHHHHHHCCcccCCCCHHHEEECCC--CCEEEcccccccccCC
Confidence 678899999999999999999865 8999999999887754
|
Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4 |
| >cd06636 STKc_MAP4K4_6 Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6 | Back alignment and domain information |
|---|
Probab=99.03 E-value=1e-09 Score=120.64 Aligned_cols=77 Identities=16% Similarity=0.227 Sum_probs=56.8
Q ss_pred CceEEeeccCCCCCCChHHHHh-cCCCHHHHHHHHHHHH--HHHHHhcCccccCCCCCCeEEccCCCCceEEEecccccc
Q 002031 241 ETVLILEFMDGIRLNDCESLEA-FGVNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKK 317 (977)
Q Consensus 241 ~~vLVmE~i~G~~L~~~~~~~~-~~~~~~~l~~~l~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~ 317 (977)
..+++|||++|.+|.++..... ...+...+...+.++. +..+|..|++|+|+||.||+++.+ +.++|+|||++..
T Consensus 93 ~~~iv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~~ivH~dl~~~nili~~~--~~~~l~dfg~~~~ 170 (282)
T cd06636 93 QLWLVMEFCGAGSVTDLVKNTKGNALKEDWIAYICREILRGLAHLHAHKVIHRDIKGQNVLLTEN--AEVKLVDFGVSAQ 170 (282)
T ss_pred EEEEEEEeCCCCcHHHHHHHccCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCC--CCEEEeeCcchhh
Confidence 3479999999999987654322 1234433433333333 678899999999999999999865 8899999999876
Q ss_pred cC
Q 002031 318 LS 319 (977)
Q Consensus 318 l~ 319 (977)
+.
T Consensus 171 ~~ 172 (282)
T cd06636 171 LD 172 (282)
T ss_pred hh
Confidence 54
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Ea |
| >cd05572 STKc_cGK_PKG Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase | Back alignment and domain information |
|---|
Probab=99.03 E-value=1.4e-09 Score=118.12 Aligned_cols=142 Identities=18% Similarity=0.139 Sum_probs=93.2
Q ss_pred cccccccEEEEEEec-CCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCcHHHHHH
Q 002031 126 LATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEAEN 204 (977)
Q Consensus 126 iasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea~n 204 (977)
||.|++|.||+|+.. +++.||||+..+.....- + .+-.+.+|...
T Consensus 1 lg~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~----------------------------~------~~~~~~~e~~~ 46 (262)
T cd05572 1 LGVGGFGRVELVKVKSKNRTFALKCVKKRHIVET----------------------------G------QQEHIFSEKEI 46 (262)
T ss_pred CCCCCceEEEEEEECCCCcEEEEEEEehhcchhh----------------------------h------HHHHHHHHHHH
Confidence 689999999999984 689999998754211000 0 00123445444
Q ss_pred HHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeee-cCCceEEeeccCCCCCCChHHHHhcCCCHHHHHHHHHHHH--HHH
Q 002031 205 TRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--AHQ 281 (977)
Q Consensus 205 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~--l~~ 281 (977)
+.++.+ ..-+.+...+. ....+++|||++|.+|.+...- ........+...+.+++ +..
T Consensus 47 l~~l~h-----------------~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~-~~~l~~~~~~~~~~~i~~~l~~ 108 (262)
T cd05572 47 LEECNH-----------------PFIVKLYRTFKDKKYIYMLMEYCLGGELWTILRD-RGLFDEYTARFYIACVVLAFEY 108 (262)
T ss_pred HHhCCC-----------------CCEeeeeeeEEcCCccEEEEecCCCCcHHHHHhh-cCCCCHHHHHHHHHHHHHHHHH
Confidence 443321 01112222222 4567899999999999876432 12244444444444433 788
Q ss_pred HHhcCccccCCCCCCeEEccCCCCceEEEecccccccCHH
Q 002031 282 IYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSSS 321 (977)
Q Consensus 282 i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~~ 321 (977)
+|..|++|+|+||.||+++.+ +.++|+|||.+..+...
T Consensus 109 lH~~~~~h~dl~~~nilv~~~--~~~~l~df~~~~~~~~~ 146 (262)
T cd05572 109 LHNRGIIYRDLKPENLLLDSN--GYVKLVDFGFAKKLKSG 146 (262)
T ss_pred HhhCCcccCCCCHHHEEEcCC--CCEEEeeCCcccccCcc
Confidence 999999999999999999865 89999999999887654
|
Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowi |
| >cd06608 STKc_myosinIII_like Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.03 E-value=1.2e-09 Score=119.13 Aligned_cols=141 Identities=16% Similarity=0.154 Sum_probs=92.5
Q ss_pred cccccccccEEEEEEec-CCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCcHHHH
Q 002031 124 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (977)
Q Consensus 124 ~piasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea 202 (977)
+++++|++|.||+|+.+ +++.|++|+........ -++.+|.
T Consensus 12 ~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~--------------------------------------~~~~~e~ 53 (275)
T cd06608 12 EVIGEGTYGKVYKARHKKTGQLVAIKIMDIIEDEE--------------------------------------EEIKEEY 53 (275)
T ss_pred eeecCCCCeEEEEEEECCCCcEEEEEEEecCchhH--------------------------------------HHHHHHH
Confidence 68999999999999984 78999999876532210 0233344
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeee-------cCCceEEeeccCCCCCCChHHHHh---cCCCHHHHHH
Q 002031 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-------SSETVLILEFMDGIRLNDCESLEA---FGVNKQKVVE 272 (977)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-------~~~~vLVmE~i~G~~L~~~~~~~~---~~~~~~~l~~ 272 (977)
..+.++.+. ...+.+...+. ....++||||++|.+|.++..... ..++...+..
T Consensus 54 ~~l~~~~~h----------------~~i~~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~ 117 (275)
T cd06608 54 NILRKYSNH----------------PNIATFYGAFIKKNPPGNDDQLWLVMELCGGGSVTDLVKGLRKKGKRLKEEWIAY 117 (275)
T ss_pred HHHHHhcCC----------------CChheEEEEEEecCCCCcceEEEEEEEcCCCCcHHHHHHHHhhcCCCCCHHHHHH
Confidence 444443210 00111212221 122579999999999987754222 2344444444
Q ss_pred HHHHHH--HHHHHhcCccccCCCCCCeEEccCCCCceEEEecccccccCH
Q 002031 273 EITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 320 (977)
Q Consensus 273 ~l~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 320 (977)
.+.+++ +..+|..|++|+|++|.||+++.+ +.++|+|||++..+..
T Consensus 118 ~~~ql~~al~~lH~~~i~H~~l~p~ni~~~~~--~~~~l~d~~~~~~~~~ 165 (275)
T cd06608 118 ILRETLRGLAYLHENKVIHRDIKGQNILLTKN--AEVKLVDFGVSAQLDS 165 (275)
T ss_pred HHHHHHHHHHHHhcCCcccCCCCHHHEEEccC--CeEEECCCccceeccc
Confidence 433333 678899999999999999999865 8899999999877644
|
Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin I |
| >cd06652 STKc_MEKK2 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 2 | Back alignment and domain information |
|---|
Probab=99.03 E-value=1e-09 Score=119.53 Aligned_cols=144 Identities=15% Similarity=0.108 Sum_probs=91.4
Q ss_pred cccccccccEEEEEEec-CCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCcHHHH
Q 002031 124 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (977)
Q Consensus 124 ~piasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea 202 (977)
+.|++|++|.||+|+.+ +|+.||||+.+......-. ... + -.+.+|+
T Consensus 8 ~~l~~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~~~~--~~~--------------------~----------~~~~~E~ 55 (265)
T cd06652 8 KLLGQGAFGRVYLCYDADTGRELAVKQVQFDPESPET--SKE--------------------V----------NALECEI 55 (265)
T ss_pred eEEecCCceEEEEEEEcCCCcEEEEEEeecCcCCccc--HHH--------------------H----------HHHHHHH
Confidence 56899999999999974 6999999976532110000 000 0 0234455
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeeec---CCceEEeeccCCCCCCChHHHHhcCCCHHHHHHHHHHHH-
Q 002031 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQS---SETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY- 278 (977)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~~---~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~- 278 (977)
..+.++.+. .-+.+...+.. ...+++|||++|.+|.+.... ....+...+...+.++.
T Consensus 56 ~~l~~l~h~-----------------~i~~~~~~~~~~~~~~~~~v~e~~~~~~L~~~l~~-~~~~~~~~~~~~~~~l~~ 117 (265)
T cd06652 56 QLLKNLLHE-----------------RIVQYYGCLRDPMERTLSIFMEHMPGGSIKDQLKS-YGALTENVTRKYTRQILE 117 (265)
T ss_pred HHHHhcCCC-----------------CeeeEEeEeccCCCceEEEEEEecCCCcHHHHHHH-cCCCCHHHHHHHHHHHHH
Confidence 555555320 01111111111 234689999999999876432 12234444444444333
Q ss_pred -HHHHHhcCccccCCCCCCeEEccCCCCceEEEecccccccC
Q 002031 279 -AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 319 (977)
Q Consensus 279 -l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~ 319 (977)
+..+|..|++|+|++|.||+++.+ +.++|+|||++..+.
T Consensus 118 ~l~~lH~~~i~H~dl~p~nil~~~~--~~~~l~Dfg~~~~~~ 157 (265)
T cd06652 118 GVSYLHSNMIVHRDIKGANILRDSV--GNVKLGDFGASKRLQ 157 (265)
T ss_pred HHHHHHhCCEecCCCCHHHEEecCC--CCEEECcCccccccc
Confidence 778899999999999999999855 899999999987653
|
Serine/threonine kinases (STKs), MAP/ERK kinase kinase 2 (MEKK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK2 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their re |
| >cd05107 PTKc_PDGFR_beta Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor beta | Back alignment and domain information |
|---|
Probab=99.03 E-value=1.3e-09 Score=126.44 Aligned_cols=38 Identities=18% Similarity=0.309 Sum_probs=34.3
Q ss_pred HHHHHhcCccccCCCCCCeEEccCCCCceEEEeccccccc
Q 002031 279 AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKL 318 (977)
Q Consensus 279 l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l 318 (977)
+..+|..|++|+|+||.|||++.+ +.++|+|||++..+
T Consensus 252 L~~LH~~~ivHrdlkp~NiLl~~~--~~~kL~DfGla~~~ 289 (401)
T cd05107 252 MEFLASKNCVHRDLAARNVLICEG--KLVKICDFGLARDI 289 (401)
T ss_pred HHHHhcCCcCcccCCcceEEEeCC--CEEEEEecCcceec
Confidence 678999999999999999999865 78999999998765
|
Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) beta; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR beta is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR beta forms homodimers or heterodimers with PDGFR alpha, depending on the nature of the PDGF ligand. PDGF-BB and PDGF-D |
| >cd05055 PTKc_PDGFR Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors | Back alignment and domain information |
|---|
Probab=99.03 E-value=1.2e-09 Score=121.97 Aligned_cols=143 Identities=15% Similarity=0.075 Sum_probs=93.9
Q ss_pred ccccccccccEEEEEEec------CCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhccccc
Q 002031 123 ETPLATASIAQVHRATLV------DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKEL 196 (977)
Q Consensus 123 ~~piasaSigqV~~A~l~------~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~El 196 (977)
.+.||.|++|+||+|+.. ++..||||+.+........ -
T Consensus 40 ~~~ig~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~------------------------------------~ 83 (302)
T cd05055 40 GKTLGAGAFGKVVEATAYGLSKSDAVMKVAVKMLKPTAHSSER------------------------------------E 83 (302)
T ss_pred cceeeccCCeeEEEEEEecCCCCCceeEEEEEecCccCChHHH------------------------------------H
Confidence 368999999999999741 4568999987644321100 0
Q ss_pred CcHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeee-cCCceEEeeccCCCCCCChHHHHhc-CCCHHHHHHHH
Q 002031 197 DFNSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAF-GVNKQKVVEEI 274 (977)
Q Consensus 197 d~~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLVmE~i~G~~L~~~~~~~~~-~~~~~~l~~~l 274 (977)
.+.+|...+.++.+. ..-+.+...+. ....+|||||+.|.+|.++...... .++...+....
T Consensus 84 ~~~~E~~~l~~l~~h----------------~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~i~~~~~~~l~~~~~~~i~ 147 (302)
T cd05055 84 ALMSELKIMSHLGNH----------------ENIVNLLGACTIGGPILVITEYCCYGDLLNFLRRKRESFLTLEDLLSFS 147 (302)
T ss_pred HHHHHHHHHHhccCC----------------CCcceEEEEEecCCceEEEEEcCCCCcHHHHHHhCCCCCCCHHHHHHHH
Confidence 234455555554210 01122222222 4567899999999999876432111 14555555544
Q ss_pred HHHH--HHHHHhcCccccCCCCCCeEEccCCCCceEEEecccccccC
Q 002031 275 TRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 319 (977)
Q Consensus 275 ~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~ 319 (977)
.++. +..+|..|++|+|+||.||+++.+ +.++|+|||++..+.
T Consensus 148 ~~i~~~l~~lH~~~ivH~dlkp~Nil~~~~--~~~~l~dfg~~~~~~ 192 (302)
T cd05055 148 YQVAKGMAFLASKNCIHRDLAARNVLLTHG--KIVKICDFGLARDIM 192 (302)
T ss_pred HHHHHHHHHHHHCCeehhhhccceEEEcCC--CeEEECCCccccccc
Confidence 4443 778899999999999999999855 789999999987664
|
Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to recept |
| >cd06648 STKc_PAK_II Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase | Back alignment and domain information |
|---|
Probab=99.03 E-value=1.3e-09 Score=120.57 Aligned_cols=138 Identities=22% Similarity=0.212 Sum_probs=91.7
Q ss_pred cccccccccEEEEEEe-cCCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCcHHHH
Q 002031 124 TPLATASIAQVHRATL-VDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (977)
Q Consensus 124 ~piasaSigqV~~A~l-~~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea 202 (977)
+.||.|++|.||+|+. .+++.|+||+.+-..... +-.+.+|.
T Consensus 25 ~~lg~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~-------------------------------------~~~~~~e~ 67 (285)
T cd06648 25 VKIGEGSTGIVCIATDKSTGRQVAVKKMDLRKQQR-------------------------------------RELLFNEV 67 (285)
T ss_pred eEeccCCCeEEEEEEECCCCCEEEEEEEeccchhH-------------------------------------HHHHHHHH
Confidence 6899999999999996 478999999753111000 00122333
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeee-cCCceEEeeccCCCCCCChHHHHhcCCCHHHHHHHHHHHH--H
Q 002031 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--A 279 (977)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~--l 279 (977)
..+.++.+ ..-+.+...+. ....+++|||++|.+|.+... ....+...+...+.+++ +
T Consensus 68 ~~l~~~~h-----------------~~vv~~~~~~~~~~~~~~v~e~~~~~~L~~~~~--~~~~~~~~~~~~~~ql~~~l 128 (285)
T cd06648 68 VIMRDYQH-----------------PNIVEMYSSYLVGDELWVVMEFLEGGALTDIVT--HTRMNEEQIATVCLAVLKAL 128 (285)
T ss_pred HHHHHcCC-----------------CChheEEEEEEcCCeEEEEEeccCCCCHHHHHH--hCCCCHHHHHHHHHHHHHHH
Confidence 33333211 11122222222 456789999999999987643 33455555555555544 7
Q ss_pred HHHHhcCccccCCCCCCeEEccCCCCceEEEecccccccC
Q 002031 280 HQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 319 (977)
Q Consensus 280 ~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~ 319 (977)
..+|..|++|+|++|.||+++.+ +.++|+|||++..+.
T Consensus 129 ~~lH~~~i~H~dl~p~Nil~~~~--~~~~l~d~g~~~~~~ 166 (285)
T cd06648 129 SFLHAQGVIHRDIKSDSILLTSD--GRVKLSDFGFCAQVS 166 (285)
T ss_pred HHHHhCCeecCCCChhhEEEcCC--CcEEEcccccchhhc
Confidence 88999999999999999999865 899999999876554
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs foun |
| >cd05051 PTKc_DDR Catalytic domain of the Protein Tyrosine Kinases, Discoidin Domain Receptors | Back alignment and domain information |
|---|
Probab=99.03 E-value=1.7e-09 Score=119.78 Aligned_cols=79 Identities=20% Similarity=0.256 Sum_probs=60.0
Q ss_pred cCCceEEeeccCCCCCCChHHHHh----------cCCCHHHHHHHHHHHH--HHHHHhcCccccCCCCCCeEEccCCCCc
Q 002031 239 SSETVLILEFMDGIRLNDCESLEA----------FGVNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHR 306 (977)
Q Consensus 239 ~~~~vLVmE~i~G~~L~~~~~~~~----------~~~~~~~l~~~l~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~ 306 (977)
....+++|||++|.+|.++..... ..++...+...+.++. +..+|..|++|+|+||.||+++.+ +.
T Consensus 91 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~LH~~~i~H~dlkp~Nili~~~--~~ 168 (296)
T cd05051 91 DPPLCMIMEYMENGDLNQFLQKHVAETSGLACNSKSLSFSTLLYMATQIASGMRYLESLNFVHRDLATRNCLVGKN--YT 168 (296)
T ss_pred CCCcEEEEecCCCCCHHHHHHhcccccccccccCCCCCHHHHHHHHHHHHHHHHHHHHcCccccccchhceeecCC--Cc
Confidence 456789999999998887643211 1245555555555544 778899999999999999999865 89
Q ss_pred eEEEecccccccC
Q 002031 307 PILLDFGLTKKLS 319 (977)
Q Consensus 307 i~LiDFG~~~~l~ 319 (977)
++|+|||++..+.
T Consensus 169 ~~l~dfg~~~~~~ 181 (296)
T cd05051 169 IKIADFGMSRNLY 181 (296)
T ss_pred eEEccccceeecc
Confidence 9999999987653
|
Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR) subfamily; catalytic (c) domain. The DDR subfamily consists of homologs of mammalian DDR1, DDR2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR subfamily members are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linke |
| >cd05089 PTKc_Tie1 Catalytic domain of the Protein Tyrosine Kinase, Tie1 | Back alignment and domain information |
|---|
Probab=99.03 E-value=1.2e-09 Score=121.44 Aligned_cols=140 Identities=17% Similarity=0.167 Sum_probs=88.8
Q ss_pred cccccccccEEEEEEec-CCC--EEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCcHH
Q 002031 124 TPLATASIAQVHRATLV-DGR--QVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNS 200 (977)
Q Consensus 124 ~piasaSigqV~~A~l~-~G~--~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~ 200 (977)
+.||.|++|+||+|+++ +|. .|++|+.+........ -+|.+
T Consensus 8 ~~lg~g~~g~v~~~~~~~~~~~~~~~ik~~~~~~~~~~~------------------------------------~~~~~ 51 (297)
T cd05089 8 DVIGEGNFGQVIRAMIKKDGLKMNAAIKMLKEFASENDH------------------------------------RDFAG 51 (297)
T ss_pred eeecCCCcceEEEEEecCCCCcceeEEEEccccCCHHHH------------------------------------HHHHH
Confidence 57999999999999975 444 4788865532111100 02445
Q ss_pred HHHHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeee-cCCceEEeeccCCCCCCChHHHHh---------------cC
Q 002031 201 EAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLEA---------------FG 264 (977)
Q Consensus 201 Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLVmE~i~G~~L~~~~~~~~---------------~~ 264 (977)
|...+.++.+. ..-+.+..... ....++||||+++.+|.++..... ..
T Consensus 52 E~~~l~~l~~h----------------p~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~ 115 (297)
T cd05089 52 ELEVLCKLGHH----------------PNIINLLGACENRGYLYIAIEYAPYGNLLDFLRKSRVLETDPAFAKEHGTAST 115 (297)
T ss_pred HHHHHHhhcCC----------------CchhheEEEEccCCcceEEEEecCCCcHHHHHHhccccccccccccccCccCC
Confidence 55555554210 00111212222 355689999999999877643211 01
Q ss_pred CCHHHHHHHHHHHH--HHHHHhcCccccCCCCCCeEEccCCCCceEEEecccccc
Q 002031 265 VNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKK 317 (977)
Q Consensus 265 ~~~~~l~~~l~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~ 317 (977)
+....+...+.++. +..+|..|++|+|+||.|||++.+ +.++|+|||++..
T Consensus 116 l~~~~~~~i~~qi~~al~~lH~~~ivH~dlkp~Nill~~~--~~~kl~dfg~~~~ 168 (297)
T cd05089 116 LTSQQLLQFASDVATGMQYLSEKQFIHRDLAARNVLVGEN--LASKIADFGLSRG 168 (297)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHCCcccCcCCcceEEECCC--CeEEECCcCCCcc
Confidence 33344444444443 788999999999999999999865 8899999998764
|
Protein Tyrosine Kinase (PTK) family; Tie1; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie1 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. No specific ligand has been identified for Tie1, although the angiopoietin, Ang-1, binds to Tie1 through integrins at high concentrations. |
| >cd08221 STKc_Nek9 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9 | Back alignment and domain information |
|---|
Probab=99.03 E-value=1.1e-09 Score=118.55 Aligned_cols=142 Identities=17% Similarity=0.114 Sum_probs=94.0
Q ss_pred cccccccccEEEEEEe-cCCCEEEEEEecCC-hhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCcHHH
Q 002031 124 TPLATASIAQVHRATL-VDGRQVVVKVQHQG-IKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSE 201 (977)
Q Consensus 124 ~piasaSigqV~~A~l-~~G~~VAVKv~~p~-i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~E 201 (977)
+.||.|++|+|+.++. .+|+.|++|..... .... ..-++.+|
T Consensus 6 ~~ig~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~------------------------------------~~~~~~~e 49 (256)
T cd08221 6 RVLGKGAFGEATLYRRTEDDSLVVWKEVNLTRLSEK------------------------------------ERRDALNE 49 (256)
T ss_pred eEecccCCceEEEEEEcCCCcEEEEEEEeecccchh------------------------------------HHHHHHHH
Confidence 5799999999999986 47999999975321 1100 00023455
Q ss_pred HHHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeee-cCCceEEeeccCCCCCCChHHHH-hcCCCHHHHHHHHHHHH-
Q 002031 202 AENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLE-AFGVNKQKVVEEITRAY- 278 (977)
Q Consensus 202 a~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLVmE~i~G~~L~~~~~~~-~~~~~~~~l~~~l~~~~- 278 (977)
...+.++.+ ...+.+...+. ....+++|||++|.+|.+..... ....+...+...+.+++
T Consensus 50 ~~~l~~~~h-----------------~~i~~~~~~~~~~~~~~~~~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~ 112 (256)
T cd08221 50 IVILSLLQH-----------------PNIIAYYNHFMDDNTLLIEMEYANGGTLYDKIVRQKGQLFEEEMVLWYLFQIVS 112 (256)
T ss_pred HHHHHhCCC-----------------CCeeEEEeEEecCCeEEEEEEecCCCcHHHHHHhccccCCCHHHHHHHHHHHHH
Confidence 555544421 11122323332 45568999999999998764422 12344555555444433
Q ss_pred -HHHHHhcCccccCCCCCCeEEccCCCCceEEEecccccccCH
Q 002031 279 -AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 320 (977)
Q Consensus 279 -l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 320 (977)
+..+|..|++|+|++|.||+++.+ +.++|+|||.+..+..
T Consensus 113 ~l~~lh~~~i~h~dl~p~ni~~~~~--~~~kl~d~~~~~~~~~ 153 (256)
T cd08221 113 AVSYIHKAGILHRDIKTLNIFLTKA--GLIKLGDFGISKILGS 153 (256)
T ss_pred HHHHHHhCCccccCCChHhEEEeCC--CCEEECcCcceEEccc
Confidence 678899999999999999999865 8899999999876644
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associa |
| >cd07833 STKc_CDKL Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.02 E-value=7.4e-10 Score=121.96 Aligned_cols=143 Identities=19% Similarity=0.189 Sum_probs=93.6
Q ss_pred cccccccccEEEEEEec-CCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCcHHHH
Q 002031 124 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (977)
Q Consensus 124 ~piasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea 202 (977)
+.||.|++|.||+|+.+ +++.||||+.+...... + ..-.+.+|.
T Consensus 7 ~~i~~g~~~~v~~~~~~~~~~~v~vK~~~~~~~~~-----------------------------~------~~~~~~~e~ 51 (288)
T cd07833 7 GVVGEGAYGVVLKCRNKATGEIVAIKKFKESEDDE-----------------------------D------VKKTALREV 51 (288)
T ss_pred EEecccCCeeEEEEEeCCCCcEEEEehhhhhcccc-----------------------------c------chhHHHHHH
Confidence 56899999999999985 68999999765422100 0 001233444
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeee-cCCceEEeeccCCCCCCChHHHHhcCCCHHHHHHHHHHHH--H
Q 002031 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--A 279 (977)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~--l 279 (977)
+.+.++.+ ...+.+..++. ....++||||++|..+..+.. .....+...+...+.+++ +
T Consensus 52 ~~l~~l~~-----------------~~i~~~~~~~~~~~~~~iv~e~~~~~~l~~~~~-~~~~~~~~~~~~~~~~i~~~l 113 (288)
T cd07833 52 KVLRQLRH-----------------ENIVNLKEAFRRKGRLYLVFEYVERTLLELLEA-SPGGLPPDAVRSYIWQLLQAI 113 (288)
T ss_pred HHHHhcCC-----------------CCeeehhheEEECCEEEEEEecCCCCHHHHHHh-cCCCCCHHHHHHHHHHHHHHH
Confidence 44444431 01122222222 355789999999866654321 223355555555544444 7
Q ss_pred HHHHhcCccccCCCCCCeEEccCCCCceEEEecccccccCHH
Q 002031 280 HQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSSS 321 (977)
Q Consensus 280 ~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~~ 321 (977)
..+|..|++|+|++|.||+++.+ +.++|+|||++..+...
T Consensus 114 ~~LH~~~i~H~dl~~~ni~~~~~--~~~kl~d~g~~~~~~~~ 153 (288)
T cd07833 114 AYCHSHNIIHRDIKPENILVSES--GVLKLCDFGFARALRAR 153 (288)
T ss_pred HHHHHCCeecCCCCHHHeEECCC--CCEEEEeeecccccCCC
Confidence 78899999999999999999865 89999999998877553
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning |
| >cd07843 STKc_CDC2L1 Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1 | Back alignment and domain information |
|---|
Probab=99.02 E-value=9.9e-10 Score=121.63 Aligned_cols=142 Identities=15% Similarity=0.141 Sum_probs=94.9
Q ss_pred cccccccccEEEEEEec-CCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCcHHHH
Q 002031 124 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (977)
Q Consensus 124 ~piasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea 202 (977)
+.||.|++|.||+|+.+ +|+.|+||..+...... . .+..+.+|.
T Consensus 11 ~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~---~--------------------------------~~~~~~~e~ 55 (293)
T cd07843 11 NRIEEGTYGVVYRARDKKTGEIVALKKLKMEKEKE---G--------------------------------FPITSLREI 55 (293)
T ss_pred hhhcCCCCeEEEEEEECCCCcEEEEEEEeeccccc---c--------------------------------chhhHHHHH
Confidence 67999999999999985 68999999765322110 0 011233455
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeee-c--CCceEEeeccCCCCCCChHHHHhcCCCHHHHHHHHHHHH-
Q 002031 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-S--SETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY- 278 (977)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~--~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~- 278 (977)
..+.++++ ..-+.+..... . ...+|||||+++ +|.++.......++...+...+.+++
T Consensus 56 ~~l~~l~h-----------------~ni~~~~~~~~~~~~~~~~lv~e~~~~-~L~~~~~~~~~~l~~~~~~~i~~qi~~ 117 (293)
T cd07843 56 NILLKLQH-----------------PNIVTVKEVVVGSNLDKIYMVMEYVEH-DLKSLMETMKQPFLQSEVKCLMLQLLS 117 (293)
T ss_pred HHHHhcCC-----------------CCEEEEEEEEEecCCCcEEEEehhcCc-CHHHHHHhccCCCCHHHHHHHHHHHHH
Confidence 55544432 01122222222 3 567999999986 66655332223356666666555554
Q ss_pred -HHHHHhcCccccCCCCCCeEEccCCCCceEEEecccccccCH
Q 002031 279 -AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 320 (977)
Q Consensus 279 -l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 320 (977)
+..+|..|++|+|++|.||+++.+ +.++|+|||++..+..
T Consensus 118 aL~~LH~~~i~H~dl~p~nili~~~--~~~~l~d~g~~~~~~~ 158 (293)
T cd07843 118 GVAHLHDNWILHRDLKTSNLLLNNR--GILKICDFGLAREYGS 158 (293)
T ss_pred HHHHHHHCCeeeccCCHHHEEECCC--CcEEEeecCceeeccC
Confidence 788999999999999999999865 8999999999887654
|
Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the |
| >cd05047 PTKc_Tie Catalytic domain of Tie Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=99.02 E-value=2.3e-09 Score=117.35 Aligned_cols=138 Identities=17% Similarity=0.177 Sum_probs=88.5
Q ss_pred ccccccccEEEEEEec-CCC--EEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCcHHH
Q 002031 125 PLATASIAQVHRATLV-DGR--QVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSE 201 (977)
Q Consensus 125 piasaSigqV~~A~l~-~G~--~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~E 201 (977)
.||.|++|.||+|+++ +|+ .|++|..+........ -++.+|
T Consensus 2 ~lg~g~~g~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~------------------------------------~~~~~E 45 (270)
T cd05047 2 VIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDH------------------------------------RDFAGE 45 (270)
T ss_pred cCCCCCCceEEEEEEcCCCCeeEEEEEEccccCCHHHH------------------------------------HHHHHH
Confidence 5899999999999985 455 4677866532211100 023445
Q ss_pred HHHHHHHHHHhCCCCCCCCCCCCCCCCCC-eEeceeee-cCCceEEeeccCCCCCCChHHHHh---------------cC
Q 002031 202 AENTRIVSANLGCKNKHEDSNKKPAYEVD-VLIPEVIQ-SSETVLILEFMDGIRLNDCESLEA---------------FG 264 (977)
Q Consensus 202 a~n~~~~~~~~~~~~~~~~~~~~~~~~~~-v~vP~v~~-~~~~vLVmE~i~G~~L~~~~~~~~---------------~~ 264 (977)
...+.++.+ ++. +.+-..+. ....++||||++|.+|.++..... ..
T Consensus 46 ~~~l~~l~~-----------------h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~ 108 (270)
T cd05047 46 LEVLCKLGH-----------------HPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTAST 108 (270)
T ss_pred HHHHHhhcc-----------------CCCeeeEEEEEecCCCceEEEEeCCCCcHHHHHHhccccccccccccccCCcCC
Confidence 555555432 111 12222222 455789999999999877643211 11
Q ss_pred CCHHHHHHHHHHHH--HHHHHhcCccccCCCCCCeEEccCCCCceEEEecccccc
Q 002031 265 VNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKK 317 (977)
Q Consensus 265 ~~~~~l~~~l~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~ 317 (977)
+....+...+.++. +..+|..|++|+|++|.||+++.+ +.++|+|||++..
T Consensus 109 l~~~~~~~~~~~i~~al~~lH~~~i~H~dikp~nili~~~--~~~kl~dfgl~~~ 161 (270)
T cd05047 109 LSSQQLLHFAADVARGMDYLSQKQFIHRDLAARNILVGEN--YVAKIADFGLSRG 161 (270)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHCCEeecccccceEEEcCC--CeEEECCCCCccc
Confidence 33444444444443 788999999999999999999865 8899999998753
|
Protein Tyrosine Kinase (PTK) family; Tie subfamily; catalytic (c) domain. The Tie subfamily consists of Tie1 and Tie2. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie proteins are receptor tyr kinases (RTKs) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2, while no specific l |
| >cd05093 PTKc_TrkB Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B | Back alignment and domain information |
|---|
Probab=99.02 E-value=1.4e-09 Score=120.30 Aligned_cols=79 Identities=15% Similarity=0.237 Sum_probs=59.6
Q ss_pred cCCceEEeeccCCCCCCChHHHHh------------cCCCHHHHHHHHHHHH--HHHHHhcCccccCCCCCCeEEccCCC
Q 002031 239 SSETVLILEFMDGIRLNDCESLEA------------FGVNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPP 304 (977)
Q Consensus 239 ~~~~vLVmE~i~G~~L~~~~~~~~------------~~~~~~~l~~~l~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~ 304 (977)
....++||||++|.+|.++..... ..++...+...+.++. +..+|..|++|+|++|.||+++.+
T Consensus 79 ~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ql~~aL~~lH~~~i~H~dlkp~Nili~~~-- 156 (288)
T cd05093 79 GDPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNRPAELTQSQMLHIAQQIAAGMVYLASQHFVHRDLATRNCLVGEN-- 156 (288)
T ss_pred CCccEEEEEcCCCCCHHHHHHHcCCccccccccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeecccCcceEEEccC--
Confidence 466789999999999877643111 1244455555555444 778999999999999999999865
Q ss_pred CceEEEecccccccC
Q 002031 305 HRPILLDFGLTKKLS 319 (977)
Q Consensus 305 g~i~LiDFG~~~~l~ 319 (977)
+.++|+|||++..+.
T Consensus 157 ~~~kl~dfg~~~~~~ 171 (288)
T cd05093 157 LLVKIGDFGMSRDVY 171 (288)
T ss_pred CcEEeccCCcccccc
Confidence 899999999987653
|
Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly |
| >cd06609 STKc_MST3_like Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.02 E-value=1.2e-09 Score=119.57 Aligned_cols=141 Identities=17% Similarity=0.177 Sum_probs=94.5
Q ss_pred cccccccccEEEEEEec-CCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCcHHHH
Q 002031 124 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (977)
Q Consensus 124 ~piasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea 202 (977)
+.||+|++|.||+|+.. +|+.||||+....... .+. -++.+|.
T Consensus 7 ~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~---~~~---------------------------------~~~~~e~ 50 (274)
T cd06609 7 ECIGKGSFGEVYKAIDKRTNQVVAIKVIDLEEAE---DEI---------------------------------EDIQQEI 50 (274)
T ss_pred hhhcCCCCeEEEEEEECCCCeEEEEEEeeccccc---hHH---------------------------------HHHHHHH
Confidence 56899999999999975 7899999986422100 000 0123444
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeee-cCCceEEeeccCCCCCCChHHHHhcCCCHHHHHHHHHHHH--H
Q 002031 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--A 279 (977)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~--l 279 (977)
+.+..+.+ ..-+.+-..+. ....++||||++|.+|.+... ....+...+...+.+++ +
T Consensus 51 ~~l~~l~h-----------------~~i~~~~~~~~~~~~~~~v~e~~~~~~L~~~~~--~~~~~~~~~~~~~~ql~~~l 111 (274)
T cd06609 51 QFLSQCRS-----------------PYITKYYGSFLKGSKLWIIMEYCGGGSCLDLLK--PGKLDETYIAFILREVLLGL 111 (274)
T ss_pred HHHHHcCC-----------------CCeeeeeEEEEECCeEEEEEEeeCCCcHHHHHh--hcCCCHHHHHHHHHHHHHHH
Confidence 44443321 00111112222 456789999999999987643 33455555555555544 6
Q ss_pred HHHHhcCccccCCCCCCeEEccCCCCceEEEecccccccCHH
Q 002031 280 HQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSSS 321 (977)
Q Consensus 280 ~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~~ 321 (977)
..+|..|++|+|++|.||+++.+ +.++|+|||++..+...
T Consensus 112 ~~lh~~~i~h~dl~p~ni~i~~~--~~~~l~d~g~~~~~~~~ 151 (274)
T cd06609 112 EYLHEEGKIHRDIKAANILLSEE--GDVKLADFGVSGQLTST 151 (274)
T ss_pred HHHHhCCcccCCCCHHHEEECCC--CCEEEcccccceeeccc
Confidence 67899999999999999999965 89999999999887653
|
Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN) |
| >cd06653 STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.02 E-value=1.2e-09 Score=119.17 Aligned_cols=144 Identities=14% Similarity=0.103 Sum_probs=91.7
Q ss_pred cccccccccEEEEEEe-cCCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCcHHHH
Q 002031 124 TPLATASIAQVHRATL-VDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (977)
Q Consensus 124 ~piasaSigqV~~A~l-~~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea 202 (977)
+.||.|++|.||+|+. .+|+.||+|+.......... - . ..-.+.+|+
T Consensus 8 ~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~--~-----------------------~-------~~~~~~~ei 55 (264)
T cd06653 8 KLLGRGAFGEVYLCYDADTGRELAVKQVPFDPDSQET--S-----------------------K-------EVNALECEI 55 (264)
T ss_pred eeEccCCCeEEEEEEEcCCCCEEEEEEEecCcccchh--h-----------------------H-------HHHHHHHHH
Confidence 6799999999999997 47999999986432211000 0 0 001244555
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeee---cCCceEEeeccCCCCCCChHHHHhcCCCHHHHHHHHHHHH-
Q 002031 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ---SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY- 278 (977)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~---~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~- 278 (977)
..+.++++ ..-+.+...+. ....+++|||++|.+|.+.... ....+...+...+.++.
T Consensus 56 ~~l~~l~h-----------------~~i~~~~~~~~~~~~~~~~~v~e~~~~~~L~~~~~~-~~~l~~~~~~~~~~~i~~ 117 (264)
T cd06653 56 QLLKNLRH-----------------DRIVQYYGCLRDPEEKKLSIFVEYMPGGSIKDQLKA-YGALTENVTRRYTRQILQ 117 (264)
T ss_pred HHHHHcCC-----------------CCcceEEEEEEcCCCCEEEEEEEeCCCCcHHHHHHH-cCCCCHHHHHHHHHHHHH
Confidence 55555432 01112222222 2335789999999998776432 12234444433333333
Q ss_pred -HHHHHhcCccccCCCCCCeEEccCCCCceEEEecccccccC
Q 002031 279 -AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 319 (977)
Q Consensus 279 -l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~ 319 (977)
+..+|..|++|+|++|+||+++.+ +.++|+|||.+..+.
T Consensus 118 al~~LH~~~i~H~dl~p~ni~i~~~--~~~~l~dfg~~~~~~ 157 (264)
T cd06653 118 GVSYLHSNMIVHRDIKGANILRDSA--GNVKLGDFGASKRIQ 157 (264)
T ss_pred HHHHHHhCCEecCCCCHHHEEEcCC--CCEEECccccccccc
Confidence 678899999999999999999855 889999999988763
|
Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain, functionally uncharacterized subgroup 1. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MEKK3-like subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phospho |
| >cd07877 STKc_p38alpha_MAPK14 Catalytic domain of the Serine/Threonine Kinase, p38alpha Mitogen-Activated Protein Kinase | Back alignment and domain information |
|---|
Probab=99.02 E-value=9.5e-10 Score=125.20 Aligned_cols=139 Identities=21% Similarity=0.258 Sum_probs=88.7
Q ss_pred cccccccccEEEEEEe-cCCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCcHHHH
Q 002031 124 TPLATASIAQVHRATL-VDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (977)
Q Consensus 124 ~piasaSigqV~~A~l-~~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea 202 (977)
++||+|++|.||+|.. ++|+.||||+.......... +-.+.+|.
T Consensus 23 ~~lg~G~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~-----------------------------------~~~~~~Ei 67 (345)
T cd07877 23 SPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIH-----------------------------------AKRTYREL 67 (345)
T ss_pred EEeeecCCeEEEEEEEcCCCeEEEEEEecCcchhhHH-----------------------------------HHHHHHHH
Confidence 6899999999999986 58999999987643211100 00123344
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeee-------cCCceEEeeccCCCCCCChHHHHhcCCCHHHHHHHHH
Q 002031 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-------SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEIT 275 (977)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-------~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~ 275 (977)
..+.++++. .-+.+..++. ....+++++++ |.+|.++. ....++...+...+.
T Consensus 68 ~~l~~l~h~-----------------~iv~~~~~~~~~~~~~~~~~~~lv~~~~-~~~L~~~~--~~~~l~~~~~~~i~~ 127 (345)
T cd07877 68 RLLKHMKHE-----------------NVIGLLDVFTPARSLEEFNDVYLVTHLM-GADLNNIV--KCQKLTDDHVQFLIY 127 (345)
T ss_pred HHHHHcCCC-----------------cccceeeeeeecccccccccEEEEehhc-ccCHHHHH--hcCCCCHHHHHHHHH
Confidence 444444321 0111222221 12357888887 66665542 223345444444444
Q ss_pred HHH--HHHHHhcCccccCCCCCCeEEccCCCCceEEEecccccccC
Q 002031 276 RAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 319 (977)
Q Consensus 276 ~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~ 319 (977)
+++ +..+|..|++|+|+||.||+++.+ +.++|+|||++....
T Consensus 128 qi~~aL~~LH~~~ivH~dlkp~NIll~~~--~~~kl~dfg~~~~~~ 171 (345)
T cd07877 128 QILRGLKYIHSADIIHRDLKPSNLAVNED--CELKILDFGLARHTD 171 (345)
T ss_pred HHHHHHHHHHHCCeeecCCChHHEEEcCC--CCEEEeccccccccc
Confidence 433 778999999999999999999865 899999999987653
|
Serine/Threonine Kinases (STKs), p38alpha subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38alpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38alpha, also called MAPK14 |
| >cd07840 STKc_CDK9_like Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.01 E-value=8.5e-10 Score=121.20 Aligned_cols=143 Identities=16% Similarity=0.196 Sum_probs=93.2
Q ss_pred cccccccccEEEEEEec-CCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCcHHHH
Q 002031 124 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (977)
Q Consensus 124 ~piasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea 202 (977)
+.||+|++|.||+|+.. +|+.||||+.+......- ...++.+|.
T Consensus 5 ~~l~~g~~~~vy~~~~~~~~~~~~~K~~~~~~~~~~-----------------------------------~~~~~~~e~ 49 (287)
T cd07840 5 AQIGEGTYGQVYKARNKKTGELVALKKIRMENEKEG-----------------------------------FPITAIREI 49 (287)
T ss_pred EEeccCCCeEEEEEEECCCCeEEEEEEEeccccccc-----------------------------------chHHHHHHH
Confidence 46899999999999975 689999998875431000 001234455
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeee-c--CCceEEeeccCCCCCCChHHHHhcCCCHHHHHHHHHHHH-
Q 002031 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-S--SETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY- 278 (977)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~--~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~- 278 (977)
..+.++.+ ..-+.+-.++. . ...++||||+++ +|.++.......++...+...+.++.
T Consensus 50 ~~l~~l~~-----------------~~i~~~~~~~~~~~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~i~~~i~~ 111 (287)
T cd07840 50 KLLQKLRH-----------------PNIVRLKEIVTSKGKGSIYMVFEYMDH-DLTGLLDSPEVKFTESQIKCYMKQLLE 111 (287)
T ss_pred HHHHhccC-----------------CCeeeheeeEecCCCCcEEEEeccccc-cHHHHHhccCCCCCHHHHHHHHHHHHH
Confidence 55544432 00122222222 2 567899999986 55544321112455555544444443
Q ss_pred -HHHHHhcCccccCCCCCCeEEccCCCCceEEEecccccccCHH
Q 002031 279 -AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSSS 321 (977)
Q Consensus 279 -l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~~ 321 (977)
+..+|..|++|+|++|.||+++++ +.++|+|||++..+...
T Consensus 112 al~~LH~~~~~h~dl~p~nil~~~~--~~~~l~d~g~~~~~~~~ 153 (287)
T cd07840 112 GLQYLHSNGILHRDIKGSNILINND--GVLKLADFGLARPYTKR 153 (287)
T ss_pred HHHHHHHCCceeccCcHHHeEEcCC--CCEEEccccceeeccCC
Confidence 778999999999999999999965 89999999998877543
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA po |
| >PF07714 Pkinase_Tyr: Protein tyrosine kinase Protein kinase; unclassified specificity | Back alignment and domain information |
|---|
Probab=99.01 E-value=7.2e-10 Score=120.75 Aligned_cols=140 Identities=19% Similarity=0.248 Sum_probs=95.7
Q ss_pred cccccccccEEEEEEec-----CCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCc
Q 002031 124 TPLATASIAQVHRATLV-----DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDF 198 (977)
Q Consensus 124 ~piasaSigqV~~A~l~-----~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~ 198 (977)
+-||.|++|.||+|+++ .+..|+||+..+...... ..+|
T Consensus 5 ~~ig~G~fg~v~~~~~~~~~~~~~~~V~vk~~~~~~~~~~------------------------------------~~~~ 48 (259)
T PF07714_consen 5 KQIGEGSFGKVYRAEWKQKDNDKNQPVAVKILKPSSSEEE------------------------------------EEEF 48 (259)
T ss_dssp EEEEEESSEEEEEEEEESTTTSSEEEEEEEEESTTSSHHH------------------------------------HHHH
T ss_pred eEEccCCCcEEEEEEEEcccCCCCEEEEEEEecccccccc------------------------------------ceee
Confidence 45899999999999986 367899999865332110 1134
Q ss_pred HHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeee-cCCceEEeeccCCCCCCChHHHH-hcCCCHHHHHHHHHH
Q 002031 199 NSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLE-AFGVNKQKVVEEITR 276 (977)
Q Consensus 199 ~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLVmE~i~G~~L~~~~~~~-~~~~~~~~l~~~l~~ 276 (977)
.+|++.+.++++ ..-+.+-.+.. .....+||||+++.+|.+..... ...++...+...+.+
T Consensus 49 ~~e~~~l~~l~h-----------------~ni~~~~g~~~~~~~~~lv~e~~~~g~L~~~L~~~~~~~~~~~~~~~i~~~ 111 (259)
T PF07714_consen 49 LNEIQILRKLRH-----------------PNIVKLYGFCIENEPLFLVMEYCPGGSLDDYLKSKNKEPLSEQQRLSIAIQ 111 (259)
T ss_dssp HHHHHHHHTHSB-----------------TTBE-EEEEEESSSSEEEEEE--TTEBHHHHHHHTCTTTSBHHHHHHHHHH
T ss_pred eecccccccccc-----------------ccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 456665555522 11122222222 45568999999999998875433 235666666666666
Q ss_pred HH--HHHHHhcCccccCCCCCCeEEccCCCCceEEEeccccccc
Q 002031 277 AY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKL 318 (977)
Q Consensus 277 ~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l 318 (977)
+. +..+|..+++|+|++|.||+++.+ +.++|.|||+....
T Consensus 112 i~~~l~~Lh~~~iiH~~l~~~nill~~~--~~~Kl~~f~~~~~~ 153 (259)
T PF07714_consen 112 IAEALSYLHSNNIIHGNLSPSNILLDSN--GQVKLSDFGLSRPI 153 (259)
T ss_dssp HHHHHHHHHHTTEEEST-SGGGEEEETT--TEEEEESTTTGEET
T ss_pred cccccccccccccccccccccccccccc--cccccccccccccc
Confidence 55 788999999999999999999965 89999999998877
|
Tyrosine kinase, catalytic domain; InterPro: IPR001245 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Tyrosine-protein kinases can transfer a phosphate group from ATP to a tyrosine residue in a protein. These enzymes can be divided into two main groups []: Receptor tyrosine kinases (RTK), which are transmembrane proteins involved in signal transduction; they play key roles in growth, differentiation, metabolism, adhesion, motility, death and oncogenesis []. RTKs are composed of 3 domains: an extracellular domain (binds ligand), a transmembrane (TM) domain, and an intracellular catalytic domain (phosphorylates substrate). The TM domain plays an important role in the dimerisation process necessary for signal transduction []. Cytoplasmic / non-receptor tyrosine kinases, which act as regulatory proteins, playing key roles in cell differentiation, motility, proliferation, and survival. For example, the Src-family of protein-tyrosine kinases []. ; GO: 0004672 protein kinase activity, 0006468 protein phosphorylation; PDB: 2HYY_C 1OPL_A 2V7A_A 2G2H_B 2G1T_A 3PYY_A 3CS9_D 2HZI_A 2E2B_A 2HIW_A .... |
| >cd07864 STKc_CDK12 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12 | Back alignment and domain information |
|---|
Probab=99.01 E-value=7.7e-10 Score=122.90 Aligned_cols=142 Identities=18% Similarity=0.173 Sum_probs=90.1
Q ss_pred cccccccccEEEEEEec-CCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCcHHHH
Q 002031 124 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (977)
Q Consensus 124 ~piasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea 202 (977)
+.+|.|++|+||+|+.+ +|+.||||+.+......- .+.++.+|.
T Consensus 13 ~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~-----------------------------------~~~~~~~e~ 57 (302)
T cd07864 13 GQIGEGTYGQVYKARDKDTGELVALKKVRLDNEKEG-----------------------------------FPITAIREI 57 (302)
T ss_pred eeecccCCEEEEEEEECCCCcEEEEEEEeecccccC-----------------------------------chHHHHHHH
Confidence 57999999999999985 689999998764321100 011233344
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeee-----------cCCceEEeeccCCCCCCChHHHHhcCCCHHHHH
Q 002031 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-----------SSETVLILEFMDGIRLNDCESLEAFGVNKQKVV 271 (977)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-----------~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~ 271 (977)
+.+.++++- ..+.+..++. ....+|||||++| .+.+........++...+.
T Consensus 58 ~~~~~l~h~-----------------~i~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~-~l~~~l~~~~~~~~~~~~~ 119 (302)
T cd07864 58 KILRQLNHR-----------------NIVNLKEIVTDKQDALDFKKDKGAFYLVFEYMDH-DLMGLLESGLVHFSEDHIK 119 (302)
T ss_pred HHHHhCCCC-----------------CeeeeeheecCcchhhhccccCCcEEEEEcccCc-cHHHHHhcCCCCCCHHHHH
Confidence 444433210 0111111111 1246799999987 3333221111235555555
Q ss_pred HHHHHHH--HHHHHhcCccccCCCCCCeEEccCCCCceEEEecccccccCH
Q 002031 272 EEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 320 (977)
Q Consensus 272 ~~l~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 320 (977)
..+.+++ +..+|..|++|+|+||+||+++.+ +.++|+|||.+..+..
T Consensus 120 ~i~~qi~~aL~~LH~~~i~H~dl~p~nili~~~--~~~kl~dfg~~~~~~~ 168 (302)
T cd07864 120 SFMKQLLEGLNYCHKKNFLHRDIKCSNILLNNK--GQIKLADFGLARLYNS 168 (302)
T ss_pred HHHHHHHHHHHHHHhCCeecCCCCHHHEEECCC--CcEEeCcccccccccC
Confidence 5555544 778999999999999999999865 8999999999887654
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 12 (CDK12) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 is widely |
| >cd05086 PTKc_Aatyk2 Catalytic domain of the Protein Tyrosine Kinase, Apoptosis-associated tyrosine kinase 2 | Back alignment and domain information |
|---|
Probab=99.01 E-value=9.3e-10 Score=120.34 Aligned_cols=76 Identities=14% Similarity=0.169 Sum_probs=54.3
Q ss_pred CCceEEeeccCCCCCCChHHHHhc---CCCHHHHHHHHHHHH--HHHHHhcCccccCCCCCCeEEccCCCCceEEEeccc
Q 002031 240 SETVLILEFMDGIRLNDCESLEAF---GVNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGL 314 (977)
Q Consensus 240 ~~~vLVmE~i~G~~L~~~~~~~~~---~~~~~~l~~~l~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~ 314 (977)
...++||||++|.+|.++...... ......+...+.++. +..+|..|++|+|+||.|||++.+ +.++|+|||+
T Consensus 68 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~i~H~dikp~nil~~~~--~~~~l~Dfg~ 145 (268)
T cd05086 68 IPYLLVFEYCELGDLKSYLSQEQWHRRNSQLLLLQRMACEIAAGVTHMHKHNFLHSDLALRNCFLTSD--LTVKVGDYGI 145 (268)
T ss_pred CccEEEEecCCCCcHHHHHHhhhcccccccHHHHHHHHHHHHHHHHHHHHCCeeccCCccceEEEcCC--ccEEeccccc
Confidence 456899999999999876432211 112222223333332 678899999999999999999865 8899999998
Q ss_pred ccc
Q 002031 315 TKK 317 (977)
Q Consensus 315 ~~~ 317 (977)
+..
T Consensus 146 ~~~ 148 (268)
T cd05086 146 GPS 148 (268)
T ss_pred ccc
Confidence 754
|
Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 2 (Aatyk2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk2 is a member of the Aatyk subfamily of proteins, which are receptor kinases containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk2 is also called lemur tyrosine kinase 2 (Lmtk2) or brain-enriched kinase (Brek). It is expressed at high levels in early postnatal brain, and has been shown to play a role in nerve growth factor (NGF) signaling. Studies with knockout mice reveal that Aatyk2 is essential for late stage |
| >cd07846 STKc_CDKL2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3 | Back alignment and domain information |
|---|
Probab=99.01 E-value=8e-10 Score=121.66 Aligned_cols=78 Identities=26% Similarity=0.387 Sum_probs=59.6
Q ss_pred CCceEEeeccCCCCCCChHHHHhcCCCHHHHHHHHHHHH--HHHHHhcCccccCCCCCCeEEccCCCCceEEEecccccc
Q 002031 240 SETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKK 317 (977)
Q Consensus 240 ~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~ 317 (977)
...++||||++|..+.++.. ....++...+...+.++. +..+|..|++|+|++|.||+++++ +.++|+|||++..
T Consensus 73 ~~~~lv~e~~~~~~l~~~~~-~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~h~~l~p~ni~~~~~--~~~~l~dfg~~~~ 149 (286)
T cd07846 73 KRLYLVFEFVDHTVLDDLEK-YPNGLDESRVRKYLFQILRGIEFCHSHNIIHRDIKPENILVSQS--GVVKLCDFGFART 149 (286)
T ss_pred CeEEEEEecCCccHHHHHHh-ccCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEECCC--CcEEEEeeeeeee
Confidence 44689999999988776532 122355666555555544 778899999999999999999865 8999999999877
Q ss_pred cCH
Q 002031 318 LSS 320 (977)
Q Consensus 318 l~~ 320 (977)
+..
T Consensus 150 ~~~ 152 (286)
T cd07846 150 LAA 152 (286)
T ss_pred ccC
Confidence 643
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKI |
| >cd05050 PTKc_Musk Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase | Back alignment and domain information |
|---|
Probab=99.01 E-value=1.5e-09 Score=119.96 Aligned_cols=140 Identities=18% Similarity=0.179 Sum_probs=90.3
Q ss_pred cccccccccEEEEEEec------CCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccC
Q 002031 124 TPLATASIAQVHRATLV------DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELD 197 (977)
Q Consensus 124 ~piasaSigqV~~A~l~------~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld 197 (977)
+.||.|++|+||+|+.+ ++..||||+.+.+....... +
T Consensus 11 ~~lg~g~~g~v~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~------------------------------------~ 54 (288)
T cd05050 11 RDIGQGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQA------------------------------------D 54 (288)
T ss_pred ccccccccccEEEEEEcccCCCCcceeEEEEecCCCcCHHHHH------------------------------------H
Confidence 57899999999999863 57889999876543211110 2
Q ss_pred cHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeee-cCCceEEeeccCCCCCCChHHHHh--------------
Q 002031 198 FNSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLEA-------------- 262 (977)
Q Consensus 198 ~~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLVmE~i~G~~L~~~~~~~~-------------- 262 (977)
+.+|+..+.++.+ ..-+.+-..+. ....+++|||++|.+|.+......
T Consensus 55 ~~~ei~~l~~l~h-----------------~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~ 117 (288)
T cd05050 55 FQREAALMAEFDH-----------------PNIVKLLGVCAVGKPMCLLFEYMAYGDLNEFLRHRSPRAQCSLSHSTSSA 117 (288)
T ss_pred HHHHHHHHHhcCC-----------------CchheEEEEEcCCCccEEEEecCCCCCHHHHHHHcCcccccccccccccc
Confidence 3344444443321 00122222222 345689999999998877643211
Q ss_pred -------cCCCHHHHHHHHHHHH--HHHHHhcCccccCCCCCCeEEccCCCCceEEEeccccccc
Q 002031 263 -------FGVNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKL 318 (977)
Q Consensus 263 -------~~~~~~~l~~~l~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l 318 (977)
..++...+...+.+++ +..+|..|++|+|+||.||+++.+ +.++|+|||++..+
T Consensus 118 ~~~~~~~~~l~~~~~~~~~~~i~~aL~~lH~~~i~H~dl~p~nil~~~~--~~~~l~dfg~~~~~ 180 (288)
T cd05050 118 RKCGLNPLPLSCTEQLCIAKQVAAGMAYLSERKFVHRDLATRNCLVGEN--MVVKIADFGLSRNI 180 (288)
T ss_pred ccccccccccCHHHHHHHHHHHHHHHHHHHhCCeecccccHhheEecCC--CceEECccccceec
Confidence 1123333344444433 678999999999999999999865 89999999998754
|
Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates M |
| >cd06606 STKc_MAPKKK Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase | Back alignment and domain information |
|---|
Probab=99.01 E-value=1.4e-09 Score=116.91 Aligned_cols=143 Identities=19% Similarity=0.144 Sum_probs=95.5
Q ss_pred cccccccccEEEEEEec-CCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCcHHHH
Q 002031 124 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (977)
Q Consensus 124 ~piasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea 202 (977)
+.|+.|++|.||+|+.. +|+.|+||+.+...... ... + .+.+|.
T Consensus 6 ~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~--~~~-----------------------~----------~~~~e~ 50 (260)
T cd06606 6 ELLGRGSFGSVYLALDKDTGELMAVKSVELSGDSE--EEL-----------------------E----------ALEREI 50 (260)
T ss_pred eEeeecCceEEEEEEECCCCcEEEEEEeeccccch--HHH-----------------------H----------HHHHHH
Confidence 67999999999999985 79999999876432210 000 0 123344
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeee-c--CCceEEeeccCCCCCCChHHHHhcCCCHHHHHHHHHHHH-
Q 002031 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-S--SETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY- 278 (977)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~--~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~- 278 (977)
..+.++.+ ..-+.+..... . ...+++|||++|.+|.++.... ..++...+...+.+++
T Consensus 51 ~~l~~l~~-----------------~~i~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~-~~~~~~~~~~~~~~l~~ 112 (260)
T cd06606 51 RILSSLQH-----------------PNIVRYYGSERDEEKNTLNIFLEYVSGGSLSSLLKKF-GKLPEPVIRKYTRQILE 112 (260)
T ss_pred HHHHHcCC-----------------CCEeeEEEEEecCCCCeEEEEEEecCCCcHHHHHHHc-CCCCHHHHHHHHHHHHH
Confidence 44443321 00111212222 2 4568999999999998874422 2455555555444444
Q ss_pred -HHHHHhcCccccCCCCCCeEEccCCCCceEEEecccccccCHH
Q 002031 279 -AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSSS 321 (977)
Q Consensus 279 -l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~~ 321 (977)
+..+|..|++|+|++|.||+++.+ +.++|+|||.+..+...
T Consensus 113 ~l~~lh~~~~~h~dl~p~ni~i~~~--~~~~l~d~~~~~~~~~~ 154 (260)
T cd06606 113 GLAYLHSNGIVHRDIKGANILVDSD--GVVKLADFGCAKRLGDI 154 (260)
T ss_pred HHHHHHHCCccccCCCHHHEEEcCC--CCEEEcccccEEecccc
Confidence 678899999999999999999965 89999999998877654
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKK |
| >cd05094 PTKc_TrkC Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C | Back alignment and domain information |
|---|
Probab=99.01 E-value=1.5e-09 Score=120.24 Aligned_cols=79 Identities=15% Similarity=0.209 Sum_probs=58.9
Q ss_pred cCCceEEeeccCCCCCCChHHHHh---------------cCCCHHHHHHHHHHHH--HHHHHhcCccccCCCCCCeEEcc
Q 002031 239 SSETVLILEFMDGIRLNDCESLEA---------------FGVNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSK 301 (977)
Q Consensus 239 ~~~~vLVmE~i~G~~L~~~~~~~~---------------~~~~~~~l~~~l~~~~--l~~i~~~G~~H~D~hPgNIlv~~ 301 (977)
....+|||||++|.+|.++..... ..++...+...+.++. +..+|..|++|+|+||.||+++.
T Consensus 79 ~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~i~H~dlkp~Nil~~~ 158 (291)
T cd05094 79 GDPLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIASQIASGMVYLASQHFVHRDLATRNCLVGA 158 (291)
T ss_pred CCceEEEEecCCCCcHHHHHHhcCcccccccccccccCcCCCCHHHHHHHHHHHHHHHHHHHhCCeeecccCcceEEEcc
Confidence 456799999999999988743211 0133344444444443 67889999999999999999986
Q ss_pred CCCCceEEEecccccccC
Q 002031 302 DPPHRPILLDFGLTKKLS 319 (977)
Q Consensus 302 ~~~g~i~LiDFG~~~~l~ 319 (977)
+ +.++|+|||++....
T Consensus 159 ~--~~~~l~dfg~a~~~~ 174 (291)
T cd05094 159 N--LLVKIGDFGMSRDVY 174 (291)
T ss_pred C--CcEEECCCCcccccC
Confidence 5 899999999987653
|
Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some n |
| >cd08217 STKc_Nek2 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2 | Back alignment and domain information |
|---|
Probab=99.01 E-value=1.4e-09 Score=117.89 Aligned_cols=77 Identities=18% Similarity=0.244 Sum_probs=58.2
Q ss_pred ceEEeeccCCCCCCChHHHH---hcCCCHHHHHHHHHHHH--HHHHH-----hcCccccCCCCCCeEEccCCCCceEEEe
Q 002031 242 TVLILEFMDGIRLNDCESLE---AFGVNKQKVVEEITRAY--AHQIY-----VDGFFNGDPHPGNFLVSKDPPHRPILLD 311 (977)
Q Consensus 242 ~vLVmE~i~G~~L~~~~~~~---~~~~~~~~l~~~l~~~~--l~~i~-----~~G~~H~D~hPgNIlv~~~~~g~i~LiD 311 (977)
.+++|||++|.+|.++.... ...++...+...+.++. +..+| ..|++|+|+||+||+++.+ +.++|+|
T Consensus 76 ~~~~~e~~~~~~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~~~~~~i~h~dl~p~nili~~~--~~~kl~d 153 (265)
T cd08217 76 LYIVMEYCEGGDLAQLIQKCKKERKYIEEEFIWRILTQLLLALYECHNRSDPGNTVLHRDLKPANIFLDAN--NNVKLGD 153 (265)
T ss_pred EEEEehhccCCCHHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHhcCccccCcceecCCCHHHEEEecC--CCEEEec
Confidence 47999999999998774322 12344444444444443 67788 8899999999999999865 8999999
Q ss_pred cccccccCH
Q 002031 312 FGLTKKLSS 320 (977)
Q Consensus 312 FG~~~~l~~ 320 (977)
||++..+..
T Consensus 154 ~g~~~~~~~ 162 (265)
T cd08217 154 FGLAKILGH 162 (265)
T ss_pred ccccccccC
Confidence 999987754
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exi |
| >cd05058 PTKc_Met_Ron Catalytic domain of the Protein Tyrosine Kinases, Met and Ron | Back alignment and domain information |
|---|
Probab=99.00 E-value=1.7e-09 Score=117.45 Aligned_cols=79 Identities=14% Similarity=0.219 Sum_probs=58.0
Q ss_pred CCceEEeeccCCCCCCChHHHHhcCCCHHHHHHHHHHHH--HHHHHhcCccccCCCCCCeEEccCCCCceEEEecccccc
Q 002031 240 SETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKK 317 (977)
Q Consensus 240 ~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~ 317 (977)
+..+++|||+.|.+|.++............+...+.++. +..+|..|++|+|+||.||+++.+ +.++|+|||++..
T Consensus 70 ~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlk~~nili~~~--~~~kl~dfg~~~~ 147 (262)
T cd05058 70 GSPLVVLPYMKHGDLRNFIRSETHNPTVKDLIGFGLQVAKGMEYLASKKFVHRDLAARNCMLDES--FTVKVADFGLARD 147 (262)
T ss_pred CCcEEEEecCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCccccccCcceEEEcCC--CcEEECCcccccc
Confidence 446899999999998876432222233444444333433 678899999999999999999865 8899999999876
Q ss_pred cCH
Q 002031 318 LSS 320 (977)
Q Consensus 318 l~~ 320 (977)
+..
T Consensus 148 ~~~ 150 (262)
T cd05058 148 IYD 150 (262)
T ss_pred ccC
Confidence 543
|
Protein Tyrosine Kinase (PTK) family; Met and Ron; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Met and Ron are receptor tyr kinases (RTKs) composed of an alpha-beta heterodimer. The extracellular alpha chain is disulfide linked to the beta chain, which contains an extracellular ligand-binding region with a sema domain, a PSI domain and four IPT repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Met binds to the ligand, hepatocyte growth factor/scatter factor (HGF/SF), and is also ca |
| >smart00221 STYKc Protein kinase; unclassified specificity | Back alignment and domain information |
|---|
Probab=99.00 E-value=1.4e-09 Score=114.62 Aligned_cols=140 Identities=19% Similarity=0.205 Sum_probs=94.8
Q ss_pred cccccccccEEEEEEec-CCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCcHHHH
Q 002031 124 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (977)
Q Consensus 124 ~piasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea 202 (977)
++|++|++|+||+++.. +++.|+||+.+...... .. -++.+|+
T Consensus 5 ~~i~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~---~~---------------------------------~~~~~e~ 48 (225)
T smart00221 5 KKLGEGAFGKVYLARDKGTGELVAVKVLKKEKTEK---QR---------------------------------EEFLREI 48 (225)
T ss_pred eEeecCCCeEEEEEEEcCCCcEEEEEeeccccchH---HH---------------------------------HHHHHHH
Confidence 67999999999999986 48999999987543220 00 0233444
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceee---e-cCCceEEeeccCCCCCCChHHHHhcCCCHHHHHHHHHHHH
Q 002031 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVI---Q-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY 278 (977)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~---~-~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~ 278 (977)
+.+.++++ ..+++++ . ....+++|||++|.+|.++........+...+...+.++.
T Consensus 49 ~~~~~~~~--------------------~~i~~~~~~~~~~~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~ 108 (225)
T smart00221 49 RILKKLKH--------------------PNIVKLYGVFEDPEPLYLVMEYCEGGDLFDYLRKKGGKLSEEEARFYLRQIL 108 (225)
T ss_pred HHHHhCCC--------------------CChhhheeeeecCCceEEEEeccCCCCHHHHHHhcccCCCHHHHHHHHHHHH
Confidence 44444311 1122222 1 4667899999999988876442221145444444444433
Q ss_pred --HHHHHhcCccccCCCCCCeEEccCCCCceEEEecccccccCHH
Q 002031 279 --AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSSS 321 (977)
Q Consensus 279 --l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~~ 321 (977)
+..+|..|++|+|++|.||+++.+ +.++|+|||.+..+...
T Consensus 109 ~~l~~lh~~~i~h~di~~~ni~v~~~--~~~~l~d~g~~~~~~~~ 151 (225)
T smart00221 109 EALEYLHSLGIVHRDLKPENILLGMD--GLVKLADFGLARFIHRD 151 (225)
T ss_pred HHHHHHHhCCeecCCCCHHHEEEcCC--CCEEEeeCceeeEecCc
Confidence 678899999999999999999865 89999999998877544
|
Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase. |
| >cd05099 PTKc_FGFR4 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 4 | Back alignment and domain information |
|---|
Probab=99.00 E-value=2.3e-09 Score=120.24 Aligned_cols=80 Identities=16% Similarity=0.184 Sum_probs=59.4
Q ss_pred cCCceEEeeccCCCCCCChHHHHh---------------cCCCHHHHHHHHHHHH--HHHHHhcCccccCCCCCCeEEcc
Q 002031 239 SSETVLILEFMDGIRLNDCESLEA---------------FGVNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSK 301 (977)
Q Consensus 239 ~~~~vLVmE~i~G~~L~~~~~~~~---------------~~~~~~~l~~~l~~~~--l~~i~~~G~~H~D~hPgNIlv~~ 301 (977)
....+++|||++|.+|.++..... ..+....+...+.++. +..+|..|++|+|+||+||+++.
T Consensus 90 ~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~gi~H~dlkp~Nill~~ 169 (314)
T cd05099 90 EGPLYVIVEYAAKGNLREFLRARRPPGPDYTFDITKVPEEQLSFKDLVSCAYQVARGMEYLESRRCIHRDLAARNVLVTE 169 (314)
T ss_pred CCceEEEEecCCCCcHHHHHHhcCCCcccccccccCCcccccCHHHHHHHHHHHHHHHHHHHHCCeeeccccceeEEEcC
Confidence 355689999999999987753211 1233444444444433 77899999999999999999986
Q ss_pred CCCCceEEEecccccccCH
Q 002031 302 DPPHRPILLDFGLTKKLSS 320 (977)
Q Consensus 302 ~~~g~i~LiDFG~~~~l~~ 320 (977)
+ ++++|+|||.++.+..
T Consensus 170 ~--~~~kL~Dfg~~~~~~~ 186 (314)
T cd05099 170 D--NVMKIADFGLARGVHD 186 (314)
T ss_pred C--CcEEEccccccccccc
Confidence 5 8999999999987643
|
Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 4 (FGFR4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR4 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to |
| >cd05053 PTKc_FGFR Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors | Back alignment and domain information |
|---|
Probab=99.00 E-value=2e-09 Score=119.14 Aligned_cols=143 Identities=20% Similarity=0.253 Sum_probs=92.5
Q ss_pred cccccccccEEEEEEec------CCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccC
Q 002031 124 TPLATASIAQVHRATLV------DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELD 197 (977)
Q Consensus 124 ~piasaSigqV~~A~l~------~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld 197 (977)
+.||.|++|.||+|..+ +...||+|+.+....... . .+
T Consensus 18 ~~ig~g~~g~v~~~~~~~~~~~~~~~~~a~k~~~~~~~~~~---~---------------------------------~~ 61 (293)
T cd05053 18 KPLGEGAFGQVVKAEAVGLDNPNETSTVAVKMLKDDATEKD---L---------------------------------SD 61 (293)
T ss_pred eEecccccccEEEEEEecCCCCCCceeEEEEEccCCCCHHH---H---------------------------------HH
Confidence 68999999999999864 236799998765322110 0 02
Q ss_pred cHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeee-cCCceEEeeccCCCCCCChHHHH---------------
Q 002031 198 FNSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLE--------------- 261 (977)
Q Consensus 198 ~~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLVmE~i~G~~L~~~~~~~--------------- 261 (977)
+.+|...+.++.+. ..-+.+-.++. ....+++|||++|.+|.++....
T Consensus 62 ~~~E~~~l~~l~~h----------------~~i~~~~~~~~~~~~~~li~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~ 125 (293)
T cd05053 62 LVSEMEMMKMIGKH----------------KNIINLLGVCTQEGPLYVVVEYAAHGNLRDFLRARRPPGEYASPDDPRPP 125 (293)
T ss_pred HHHHHHHHHhhcCC----------------CCeeeEEEEEcCCCCeEEEEEeCCCCcHHHHHHhcCCCcccccccccccc
Confidence 33444444443110 11122323332 45578999999999988764321
Q ss_pred hcCCCHHHHHHHHHHHH--HHHHHhcCccccCCCCCCeEEccCCCCceEEEecccccccCH
Q 002031 262 AFGVNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 320 (977)
Q Consensus 262 ~~~~~~~~l~~~l~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 320 (977)
...++...+...+.++. +..+|..|++|+|++|.||+++.+ +.++|+|||.+..+..
T Consensus 126 ~~~l~~~~~~~i~~qi~~al~~LH~~~ivH~dlkp~Nil~~~~--~~~kL~Dfg~~~~~~~ 184 (293)
T cd05053 126 EETLTQKDLVSFAYQVARGMEFLASKKCIHRDLAARNVLVTED--HVMKIADFGLARDIHH 184 (293)
T ss_pred ccccCHHHHHHHHHHHHHHHHHHHHCCccccccceeeEEEcCC--CeEEeCcccccccccc
Confidence 11233444444444433 778899999999999999999865 8999999999886643
|
Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation, |
| >cd08215 STKc_Nek Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase | Back alignment and domain information |
|---|
Probab=99.00 E-value=1.5e-09 Score=116.85 Aligned_cols=143 Identities=17% Similarity=0.206 Sum_probs=94.9
Q ss_pred cccccccccEEEEEEec-CCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCcHHHH
Q 002031 124 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (977)
Q Consensus 124 ~piasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea 202 (977)
+.|+.|++|.||+|... +++.|+||+........ .+ .. .+..|.
T Consensus 6 ~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~--~~---------------------------~~------~~~~e~ 50 (258)
T cd08215 6 KQIGKGSFGKVYLVRRKSDGKLYVLKEIDLSNMSE--KE---------------------------RE------DALNEV 50 (258)
T ss_pred eeeccCCCeEEEEEEEcCCCcEEEEEEeecccCCh--HH---------------------------HH------HHHHHH
Confidence 57899999999999974 78999999865322110 00 00 122333
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeee-cCCceEEeeccCCCCCCChHHHHh---cCCCHHHHHHHHHHHH
Q 002031 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLEA---FGVNKQKVVEEITRAY 278 (977)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLVmE~i~G~~L~~~~~~~~---~~~~~~~l~~~l~~~~ 278 (977)
+.+..+++ ..-+.+...+. ....+|||||++|.+|.+...... ..++...+...+.+++
T Consensus 51 ~~l~~l~~-----------------~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~ 113 (258)
T cd08215 51 KILKKLNH-----------------PNIIKYYESFEEKGKLCIVMEYADGGDLSQKIKKQKKEGKPFPEEQILDWFVQLC 113 (258)
T ss_pred HHHHhcCC-----------------CChhheEEEEecCCEEEEEEEecCCCcHHHHHHHhhccCCCcCHHHHHHHHHHHH
Confidence 33333321 00111111222 456689999999999987643321 3455666666665554
Q ss_pred --HHHHHhcCccccCCCCCCeEEccCCCCceEEEecccccccCH
Q 002031 279 --AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 320 (977)
Q Consensus 279 --l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 320 (977)
+..+|..|++|+|++|.||+++.+ +.++|+|||.+.....
T Consensus 114 ~~l~~lh~~~~~H~dl~~~nil~~~~--~~~~l~d~~~~~~~~~ 155 (258)
T cd08215 114 LALKYLHSRKILHRDIKPQNIFLTSN--GLVKLGDFGISKVLSS 155 (258)
T ss_pred HHHHHHHhCCEecccCChHHeEEcCC--CcEEECCccceeeccc
Confidence 788999999999999999999865 8899999999887654
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They |
| >cd05032 PTKc_InsR_like Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=99.00 E-value=1.3e-09 Score=119.35 Aligned_cols=141 Identities=18% Similarity=0.206 Sum_probs=91.4
Q ss_pred cccccccccEEEEEEec------CCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccC
Q 002031 124 TPLATASIAQVHRATLV------DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELD 197 (977)
Q Consensus 124 ~piasaSigqV~~A~l~------~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld 197 (977)
+.||.|++|.||+|..+ ++..||||+...+.... ....
T Consensus 12 ~~lg~g~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~~~~------------------------------------~~~~ 55 (277)
T cd05032 12 RELGQGSFGMVYEGLAKGVVKGEPETRVAIKTVNENASMR------------------------------------ERIE 55 (277)
T ss_pred eEecCCCCceEEEEEEeccCCCCcceeEEEEecCCccCHH------------------------------------HHHH
Confidence 57999999999999874 24789999865432100 0012
Q ss_pred cHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeee-cCCceEEeeccCCCCCCChHHHHhc---------CCCH
Q 002031 198 FNSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAF---------GVNK 267 (977)
Q Consensus 198 ~~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLVmE~i~G~~L~~~~~~~~~---------~~~~ 267 (977)
+.+|+..+..+.+ ...+.+-..+. ....++||||++|.+|.++...... ....
T Consensus 56 ~~~e~~~l~~~~~-----------------~~i~~~~~~~~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~ 118 (277)
T cd05032 56 FLNEASVMKEFNC-----------------HHVVRLLGVVSTGQPTLVVMELMAKGDLKSYLRSRRPEAENNPGLGPPTL 118 (277)
T ss_pred HHHHHHHHHhCCC-----------------CceeEEEEEEcCCCCcEEEEecCCCCCHHHHHHhcccchhhccCCCCCCH
Confidence 3445554444321 11122222222 4667999999999999876432110 1233
Q ss_pred HHHHHHHHHHH--HHHHHhcCccccCCCCCCeEEccCCCCceEEEecccccccC
Q 002031 268 QKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 319 (977)
Q Consensus 268 ~~l~~~l~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~ 319 (977)
..+...+.++. +..+|..|++|+|++|.||+++.+ +.++|+|||+++.+.
T Consensus 119 ~~~~~~~~~i~~~l~~lH~~~i~H~di~p~nill~~~--~~~kl~dfg~~~~~~ 170 (277)
T cd05032 119 QKFIQMAAEIADGMAYLAAKKFVHRDLAARNCMVAED--LTVKIGDFGMTRDIY 170 (277)
T ss_pred HHHHHHHHHHHHHHHHHHhCCccccccChheEEEcCC--CCEEECCcccchhhc
Confidence 34444444443 778999999999999999999965 899999999987653
|
Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological |
| >KOG1095 consensus Protein tyrosine kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.00 E-value=6.6e-10 Score=136.66 Aligned_cols=140 Identities=20% Similarity=0.201 Sum_probs=105.5
Q ss_pred cccccccccEEEEEEec--CCC----EEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccC
Q 002031 124 TPLATASIAQVHRATLV--DGR----QVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELD 197 (977)
Q Consensus 124 ~piasaSigqV~~A~l~--~G~----~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld 197 (977)
+.||.|.||.||+|+.. +|. .||||..++.... .++.+
T Consensus 698 ~~lG~G~FG~VY~g~~~~~~~~~~~~~vaiK~l~~~~~~------------------------------------~~~~~ 741 (1025)
T KOG1095|consen 698 RVLGKGAFGEVYEGTYSDVPGSVSPIQVAVKSLKRLSSE------------------------------------QEVSD 741 (1025)
T ss_pred eeeccccccceEEEEEecCCCCccceEEEEEeccccCCH------------------------------------HHHHH
Confidence 68999999999999975 454 4888876654321 13457
Q ss_pred cHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeee-cCCceEEeeccCCCCCCChHHHH------hcCCCHHHH
Q 002031 198 FNSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLE------AFGVNKQKV 270 (977)
Q Consensus 198 ~~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLVmE~i~G~~L~~~~~~~------~~~~~~~~l 270 (977)
|.+||..+..|.| ...|..--|-. ....++++|||+|+.|..+.... ...+...++
T Consensus 742 Fl~Ea~~m~~f~H-----------------pNiv~liGv~l~~~~~~i~leyM~gGDL~sflr~~r~~~~~~~~L~~~dL 804 (1025)
T KOG1095|consen 742 FLKEALLMSKFDH-----------------PNIVSLIGVCLDSGPPLILLEYMEGGDLLSFLRESRPAPFQPSNLSMRDL 804 (1025)
T ss_pred HHHHHHHHhcCCC-----------------cceeeEEEeecCCCCcEEEehhcccCcHHHHHHhcccccCCCCCCCHHHH
Confidence 8999999888754 11122222222 57789999999999998875543 344566777
Q ss_pred HHHHHHHH--HHHHHhcCccccCCCCCCeEEccCCCCceEEEeccccccc
Q 002031 271 VEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKL 318 (977)
Q Consensus 271 ~~~l~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l 318 (977)
+...+++. ++.+.+..||||||-..|+|++.. ..+++.||||++.+
T Consensus 805 l~~a~dvA~G~~YLe~~~fvHRDLAaRNCLL~~~--r~VKIaDFGlArDi 852 (1025)
T KOG1095|consen 805 LAFALDVAKGMNYLESKHFVHRDLAARNCLLDER--RVVKIADFGLARDI 852 (1025)
T ss_pred HHHHHHHhhhhHHHHhCCCcCcchhhhheeeccc--CcEEEcccchhHhh
Confidence 77777776 888999999999999999999965 78999999999844
|
|
| >cd05078 PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3 | Back alignment and domain information |
|---|
Probab=99.00 E-value=5.6e-10 Score=121.26 Aligned_cols=81 Identities=16% Similarity=0.149 Sum_probs=58.4
Q ss_pred cCCceEEeeccCCCCCCChHHHHhcCCCHHHHHHHHHHHH--HHHHHhcCccccCCCCCCeEEccCCC------CceEEE
Q 002031 239 SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPP------HRPILL 310 (977)
Q Consensus 239 ~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~------g~i~Li 310 (977)
....++||||++|.+|.++.......++...+...+.++. +..+|..|++|+|+||.||+++.++. +.++++
T Consensus 71 ~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~iiH~dlkp~nili~~~~~~~~~~~~~~~l~ 150 (258)
T cd05078 71 GDESIMVQEYVKFGSLDTYLKKNKNLINISWKLEVAKQLAWALHFLEDKGLTHGNVCAKNVLLIREEDRKTGNPPFIKLS 150 (258)
T ss_pred CCCcEEEEecCCCCcHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCccceEEEecccccccCCCceEEec
Confidence 4667899999999999876432222345555444444443 77889999999999999999986521 137899
Q ss_pred ecccccccC
Q 002031 311 DFGLTKKLS 319 (977)
Q Consensus 311 DFG~~~~l~ 319 (977)
|||.+....
T Consensus 151 d~g~~~~~~ 159 (258)
T cd05078 151 DPGISITVL 159 (258)
T ss_pred ccccccccC
Confidence 999876553
|
Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity |
| >cd06620 PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases | Back alignment and domain information |
|---|
Probab=98.99 E-value=1.9e-09 Score=118.96 Aligned_cols=137 Identities=19% Similarity=0.227 Sum_probs=89.0
Q ss_pred cccccccccEEEEEEec-CCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCcHHHH
Q 002031 124 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (977)
Q Consensus 124 ~piasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea 202 (977)
+.||.|++|+||+|... +|+.||+|+........... ++.+|.
T Consensus 11 ~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~------------------------------------~~~~E~ 54 (284)
T cd06620 11 SDLGAGNGGSVSKVKHIPTGTVMAKKVVHIGAKSSVRK------------------------------------QILREL 54 (284)
T ss_pred HHcCCCCCeEEEEEEEcCCCcEEEEEEEEecCcchHHH------------------------------------HHHHHH
Confidence 56899999999999974 78999999876432211110 123344
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceee---e-cCCceEEeeccCCCCCCChHHHHhcCCCHHHHHHHHHHHH
Q 002031 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVI---Q-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY 278 (977)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~---~-~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~ 278 (977)
+.+..+.+ -.+++++ . ....+|||||++|.+|.++... ...+....+.....++.
T Consensus 55 ~~l~~l~h--------------------~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~-~~~~~~~~~~~~~~~i~ 113 (284)
T cd06620 55 QIMHECRS--------------------PYIVSFYGAFLNENNICMCMEFMDCGSLDRIYKK-GGPIPVEILGKIAVAVV 113 (284)
T ss_pred HHHHHcCC--------------------CCcceEeeeEecCCEEEEEEecCCCCCHHHHHHh-ccCCCHHHHHHHHHHHH
Confidence 44433321 1122222 1 4567899999999999776332 12233333333333332
Q ss_pred --HHHHHh-cCccccCCCCCCeEEccCCCCceEEEecccccccC
Q 002031 279 --AHQIYV-DGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 319 (977)
Q Consensus 279 --l~~i~~-~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~ 319 (977)
+..+|. +|++|+|++|.||+++.+ ++++|+|||++..+.
T Consensus 114 ~~l~~LH~~~~i~H~dl~p~nil~~~~--~~~~l~d~gl~~~~~ 155 (284)
T cd06620 114 EGLTYLYNVHRIMHRDIKPSNILVNSR--GQIKLCDFGVSGELI 155 (284)
T ss_pred HHHHHHHHhcCeeccCCCHHHEEECCC--CcEEEccCCcccchh
Confidence 566775 699999999999999865 899999999987653
|
Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include |
| >KOG0983 consensus Mitogen-activated protein kinase (MAPK) kinase MKK7/JNKK2 [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=98.99 E-value=4.6e-10 Score=116.67 Aligned_cols=79 Identities=22% Similarity=0.394 Sum_probs=49.3
Q ss_pred cCCceEEeeccCCCCCCChHHHHhcCCCHHHHHHHHHHHHHHHHH----hcCccccCCCCCCeEEccCCCCceEEEeccc
Q 002031 239 SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAYAHQIY----VDGFFNGDPHPGNFLVSKDPPHRPILLDFGL 314 (977)
Q Consensus 239 ~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~l~~i~----~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~ 314 (977)
.+.-.+.||.+. .-++.+.. +-.+.-+++++-.+.-+.++.++ +||++|||+||.|||++.. |.|+|+|||+
T Consensus 163 n~dV~IcMelMs-~C~ekLlk-rik~piPE~ilGk~tva~v~AL~YLKeKH~viHRDvKPSNILlDe~--GniKlCDFGI 238 (391)
T KOG0983|consen 163 NTDVFICMELMS-TCAEKLLK-RIKGPIPERILGKMTVAIVKALYYLKEKHGVIHRDVKPSNILLDER--GNIKLCDFGI 238 (391)
T ss_pred CchHHHHHHHHH-HHHHHHHH-HhcCCchHHhhhhhHHHHHHHHHHHHHhcceeecccCccceEEccC--CCEEeecccc
Confidence 344556777763 11122211 11122234444444333333332 5999999999999999966 9999999999
Q ss_pred ccccCHH
Q 002031 315 TKKLSSS 321 (977)
Q Consensus 315 ~~~l~~~ 321 (977)
++++.+.
T Consensus 239 sGrlvdS 245 (391)
T KOG0983|consen 239 SGRLVDS 245 (391)
T ss_pred cceeecc
Confidence 9998654
|
|
| >cd06647 STKc_PAK_I Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase | Back alignment and domain information |
|---|
Probab=98.99 E-value=1.4e-09 Score=120.77 Aligned_cols=78 Identities=17% Similarity=0.300 Sum_probs=59.8
Q ss_pred cCCceEEeeccCCCCCCChHHHHhcCCCHHHHHHHHHHHH--HHHHHhcCccccCCCCCCeEEccCCCCceEEEeccccc
Q 002031 239 SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTK 316 (977)
Q Consensus 239 ~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~ 316 (977)
....++||||++|.+|.++. .........+...+.+++ +..+|..|++|+|++|.||+++.+ +.++|+|||++.
T Consensus 88 ~~~~~lv~e~~~~~~L~~~~--~~~~l~~~~~~~i~~~l~~al~~LH~~gi~H~dL~p~Nili~~~--~~~kL~dfg~~~ 163 (293)
T cd06647 88 GDELWVVMEYLAGGSLTDVV--TETCMDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDNILLGMD--GSVKLTDFGFCA 163 (293)
T ss_pred CCcEEEEEecCCCCcHHHHH--hhcCCCHHHHHHHHHHHHHHHHHHHhCCEeeccCCHHHEEEcCC--CCEEEccCccee
Confidence 45678999999999998763 233444445444444443 678899999999999999999865 889999999887
Q ss_pred ccCH
Q 002031 317 KLSS 320 (977)
Q Consensus 317 ~l~~ 320 (977)
.+..
T Consensus 164 ~~~~ 167 (293)
T cd06647 164 QITP 167 (293)
T ss_pred cccc
Confidence 6654
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their bi |
| >cd06634 STKc_TAO2 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 2 | Back alignment and domain information |
|---|
Probab=98.99 E-value=2.1e-09 Score=120.16 Aligned_cols=154 Identities=16% Similarity=0.139 Sum_probs=97.3
Q ss_pred CCChhhcccccCccccccccccEEEEEEec-CCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHh
Q 002031 111 GESMGGMFMDFVETPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWC 189 (977)
Q Consensus 111 g~~~~~~f~~~d~~piasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~ 189 (977)
.....+.|... +.+|.|++|+||+|+.+ +|+.||||..+..-... . ..
T Consensus 10 ~~~~~~~~~~~--~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~-~-----------------------~~----- 58 (308)
T cd06634 10 KDDPEKLFSDL--REIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQS-N-----------------------EK----- 58 (308)
T ss_pred cCCcHHHHHHH--HheeeCCCEEEEEEEEcCCCcEEEEEEEecccccC-h-----------------------HH-----
Confidence 34455555543 56999999999999974 78999999765321100 0 00
Q ss_pred hhcccccCcHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeee-cCCceEEeeccCCCCCCChHHHHhcCCCHH
Q 002031 190 KEAPKELDFNSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAFGVNKQ 268 (977)
Q Consensus 190 ~~l~~Eld~~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~ 268 (977)
.-++.+|.+.+..+.+ ...+.+...+. ....++||||+.| ++.+........++..
T Consensus 59 -----~~~~~~e~~~l~~l~h-----------------~~i~~~~~~~~~~~~~~lv~e~~~~-~l~~~~~~~~~~l~~~ 115 (308)
T cd06634 59 -----WQDIIKEVRFLQKLRH-----------------PNTIQYRGCYLREHTAWLVMEYCLG-SASDLLEVHKKPLQEV 115 (308)
T ss_pred -----HHHHHHHHHHHHhCCC-----------------CCcccEEEEEEcCCeeEEEEEccCC-CHHHHHHHcCCCCCHH
Confidence 0023344444444422 01122222222 4567899999986 5555433333345555
Q ss_pred HHHHHHHHHH--HHHHHhcCccccCCCCCCeEEccCCCCceEEEecccccccCH
Q 002031 269 KVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 320 (977)
Q Consensus 269 ~l~~~l~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 320 (977)
.+...+.+++ +..+|..|++|+|++|.||+++.+ +.++|+|||++..+..
T Consensus 116 ~~~~~~~~l~~~l~~LH~~~i~H~dl~p~nil~~~~--~~~kl~dfg~~~~~~~ 167 (308)
T cd06634 116 EIAAVTHGALQGLAYLHSHNMIHRDVKAGNILLSEP--GLVKLGDFGSASIMAP 167 (308)
T ss_pred HHHHHHHHHHHHHHHHHhCCcccCCCCHHhEEECCC--CcEEECCcccceeecC
Confidence 5555554443 778899999999999999999865 8999999999876543
|
Serine/threonine kinases (STKs), thousand-and-one amino acids 2 (TAO2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activatin |
| >cd07865 STKc_CDK9 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9 | Back alignment and domain information |
|---|
Probab=98.99 E-value=1.4e-09 Score=121.13 Aligned_cols=77 Identities=22% Similarity=0.268 Sum_probs=56.3
Q ss_pred CceEEeeccCCCCCCChHHHHhcCCCHHHHHHHHHHHH--HHHHHhcCccccCCCCCCeEEccCCCCceEEEeccccccc
Q 002031 241 ETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKL 318 (977)
Q Consensus 241 ~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l 318 (977)
..++||||+.+ ++.+........++...+...+.+++ +..+|..|++|+|++|.||+++.+ +.++|+|||++..+
T Consensus 93 ~~~lv~e~~~~-~l~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~~i~H~dl~p~nil~~~~--~~~kl~dfg~~~~~ 169 (310)
T cd07865 93 SFYLVFEFCEH-DLAGLLSNKNVKFTLSEIKKVMKMLLNGLYYIHRNKILHRDMKAANILITKD--GILKLADFGLARAF 169 (310)
T ss_pred eEEEEEcCCCc-CHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHEEECCC--CcEEECcCCCcccc
Confidence 34899999976 44443221112355555555555544 788999999999999999999865 89999999998866
Q ss_pred CH
Q 002031 319 SS 320 (977)
Q Consensus 319 ~~ 320 (977)
..
T Consensus 170 ~~ 171 (310)
T cd07865 170 SL 171 (310)
T ss_pred cC
Confidence 43
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK9 together with a cyclin partner (cyclin T1, T2a, T2b, or K) is the main component of distinct positive transcription elongation factors (P-TEFb), which function as Ser2 C-terminal domain kinases of RNA polymerase II. P-TEFb participates in multipl |
| >PTZ00024 cyclin-dependent protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=98.99 E-value=1.4e-09 Score=122.96 Aligned_cols=152 Identities=14% Similarity=0.128 Sum_probs=94.5
Q ss_pred cccccccccEEEEEEec-CCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCcHHHH
Q 002031 124 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (977)
Q Consensus 124 ~piasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea 202 (977)
+.||+|++|.||+|+.+ +|+.||||+.+.........+ ..........+.++.+|.
T Consensus 15 ~~ig~G~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~-----------------------~~~~~~~~~~~~~~~~E~ 71 (335)
T PTZ00024 15 AHLGEGTYGKVEKAYDTLTGKIVAIKKVKIIEISNDVTK-----------------------DRQLVGMCGIHFTTLREL 71 (335)
T ss_pred hcccCCCceeEEEEEECCCCCeEEEEEeecccccccccc-----------------------chhhhcccccchhHHHHH
Confidence 57999999999999974 799999998754221110000 000000111122345566
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeee-cCCceEEeeccCCCCCCChHHHHhcCCCHHHHHHHHHHHH--H
Q 002031 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--A 279 (977)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~--l 279 (977)
+.+..+.+ ..-+.+...+. ....++||||++| +|.+... ....++...+...+.+++ +
T Consensus 72 ~~l~~l~h-----------------~~iv~~~~~~~~~~~~~lv~e~~~~-~l~~~l~-~~~~~~~~~~~~~~~ql~~aL 132 (335)
T PTZ00024 72 KIMNEIKH-----------------ENIMGLVDVYVEGDFINLVMDIMAS-DLKKVVD-RKIRLTESQVKCILLQILNGL 132 (335)
T ss_pred HHHHhCCC-----------------cceeeeeEEEecCCcEEEEEecccc-CHHHHHH-hcCCCCHHHHHHHHHHHHHHH
Confidence 65555432 01122223332 4556899999986 5554432 122345555555555544 7
Q ss_pred HHHHhcCccccCCCCCCeEEccCCCCceEEEecccccccC
Q 002031 280 HQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 319 (977)
Q Consensus 280 ~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~ 319 (977)
..+|..|++|+|++|+||+++.+ +.++|+|||++..+.
T Consensus 133 ~~LH~~~i~H~dl~~~nill~~~--~~~kl~dfg~~~~~~ 170 (335)
T PTZ00024 133 NVLHKWYFMHRDLSPANIFINSK--GICKIADFGLARRYG 170 (335)
T ss_pred HHHHhCCeecccccHHHeEECCC--CCEEECCccceeecc
Confidence 88999999999999999999865 889999999987664
|
|
| >cd07860 STKc_CDK2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3 | Back alignment and domain information |
|---|
Probab=98.99 E-value=8.9e-10 Score=121.24 Aligned_cols=141 Identities=17% Similarity=0.182 Sum_probs=90.1
Q ss_pred cccccccccEEEEEEec-CCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCcHHHH
Q 002031 124 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (977)
Q Consensus 124 ~piasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea 202 (977)
++|++|++|+||+|+.+ +|+.||||+.+...... ..+-.+.+|+
T Consensus 6 ~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~-----------------------------------~~~~~~~~E~ 50 (284)
T cd07860 6 EKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETE-----------------------------------GVPSTAIREI 50 (284)
T ss_pred eeecCCCceEEEEEEECCCCCEEEEEEcccccccc-----------------------------------ccchHHHHHH
Confidence 57999999999999974 79999999765321100 0001234455
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeee-cCCceEEeeccCCCCCCChHHHH-hcCCCHHHHHHHHHHHH--
Q 002031 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLE-AFGVNKQKVVEEITRAY-- 278 (977)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLVmE~i~G~~L~~~~~~~-~~~~~~~~l~~~l~~~~-- 278 (977)
+.+.++.+- .-+.+-..+. ....++||||+.+ +|.+..... ...++...+...+.+++
T Consensus 51 ~~l~~l~h~-----------------~i~~~~~~~~~~~~~~~v~e~~~~-~l~~~~~~~~~~~l~~~~~~~~~~~i~~~ 112 (284)
T cd07860 51 SLLKELNHP-----------------NIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASPLSGIPLPLIKSYLFQLLQG 112 (284)
T ss_pred HHHHhcCCC-----------------CCcchhhhcccCCcEEEEeecccc-CHHHHHHhCCCCCCCHHHHHHHHHHHHHH
Confidence 555444320 0111111222 3556899999975 555442211 12345555555554444
Q ss_pred HHHHHhcCccccCCCCCCeEEccCCCCceEEEecccccccC
Q 002031 279 AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 319 (977)
Q Consensus 279 l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~ 319 (977)
+..+|..|++|+|++|+||+++.+ +.++|+|||++..+.
T Consensus 113 l~~lh~~~i~H~~l~p~nill~~~--~~~~l~dfg~~~~~~ 151 (284)
T cd07860 113 LAFCHSHRVLHRDLKPQNLLINTE--GAIKLADFGLARAFG 151 (284)
T ss_pred HHHHHHCCeecCCCCHHHEEECCC--CCEEEeeccchhhcc
Confidence 778999999999999999999865 899999999876553
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex |
| >cd05045 PTKc_RET Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein | Back alignment and domain information |
|---|
Probab=98.98 E-value=2.3e-09 Score=118.65 Aligned_cols=79 Identities=15% Similarity=0.164 Sum_probs=58.5
Q ss_pred cCCceEEeeccCCCCCCChHHHHh-----------------------cCCCHHHHHHHHHHHH--HHHHHhcCccccCCC
Q 002031 239 SSETVLILEFMDGIRLNDCESLEA-----------------------FGVNKQKVVEEITRAY--AHQIYVDGFFNGDPH 293 (977)
Q Consensus 239 ~~~~vLVmE~i~G~~L~~~~~~~~-----------------------~~~~~~~l~~~l~~~~--l~~i~~~G~~H~D~h 293 (977)
....+++|||+.|.+|.++..... ..++...+...+.++. +..+|..|++|+|+|
T Consensus 75 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~ivH~dik 154 (290)
T cd05045 75 DGPLLLIVEYAKYGSLRSFLRESRKVGPSYLGSDGNRNSSYLDNPDERALTMGDLISFAWQISRGMQYLAEMKLVHRDLA 154 (290)
T ss_pred CCCcEEEEEecCCCCHHHHHHhcCCccccccccccccccccccCccccccCHHHHHHHHHHHHHHHHHHHHCCeehhhhh
Confidence 466789999999999987643110 1123344444444444 788999999999999
Q ss_pred CCCeEEccCCCCceEEEecccccccC
Q 002031 294 PGNFLVSKDPPHRPILLDFGLTKKLS 319 (977)
Q Consensus 294 PgNIlv~~~~~g~i~LiDFG~~~~l~ 319 (977)
|.||+++.+ +.++|+|||++..+.
T Consensus 155 p~nill~~~--~~~kl~dfg~~~~~~ 178 (290)
T cd05045 155 ARNVLVAEG--RKMKISDFGLSRDVY 178 (290)
T ss_pred hheEEEcCC--CcEEecccccccccc
Confidence 999999865 889999999987653
|
Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leadi |
| >cd06651 STKc_MEKK3 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3 | Back alignment and domain information |
|---|
Probab=98.98 E-value=2.2e-09 Score=117.08 Aligned_cols=145 Identities=16% Similarity=0.130 Sum_probs=92.7
Q ss_pred ccccccccccEEEEEEec-CCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCcHHH
Q 002031 123 ETPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSE 201 (977)
Q Consensus 123 ~~piasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~E 201 (977)
.+.+|.|++|.||+|... +|+.|++|+.+......... + .-..+.+|
T Consensus 7 ~~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~~~~~~~~--~------------------------------~~~~~~~e 54 (266)
T cd06651 7 GKLLGQGAFGRVYLCYDVDTGRELAAKQVQFDPESPETS--K------------------------------EVSALECE 54 (266)
T ss_pred cceecCCCCEEEEEEEEcCCCcEEEEEEeecCcCCchhH--H------------------------------HHHHHHHH
Confidence 367999999999999974 69999999865432110000 0 00023445
Q ss_pred HHHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeee---cCCceEEeeccCCCCCCChHHHHhcCCCHHHHHHHHHHHH
Q 002031 202 AENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ---SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY 278 (977)
Q Consensus 202 a~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~---~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~ 278 (977)
...+.++++ ..-+.+...+. ....+++|||++|.+|.+.... ....+.......+.++.
T Consensus 55 ~~~l~~l~h-----------------~~i~~~~~~~~~~~~~~~~l~~e~~~~~~L~~~l~~-~~~l~~~~~~~~~~qi~ 116 (266)
T cd06651 55 IQLLKNLQH-----------------ERIVQYYGCLRDRAEKTLTIFMEYMPGGSVKDQLKA-YGALTESVTRKYTRQIL 116 (266)
T ss_pred HHHHHHcCC-----------------CCeeeEEEEEEcCCCCEEEEEEeCCCCCcHHHHHHH-cCCCCHHHHHHHHHHHH
Confidence 555554432 01122222222 1335789999999999876432 12244444444444433
Q ss_pred --HHHHHhcCccccCCCCCCeEEccCCCCceEEEecccccccC
Q 002031 279 --AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 319 (977)
Q Consensus 279 --l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~ 319 (977)
+..+|..|++|+|++|.||+++.+ ++++|+|||++..+.
T Consensus 117 ~~l~~LH~~~i~H~~l~p~nil~~~~--~~~~l~dfg~~~~~~ 157 (266)
T cd06651 117 EGMSYLHSNMIVHRDIKGANILRDSA--GNVKLGDFGASKRLQ 157 (266)
T ss_pred HHHHHHHhCCeeeCCCCHHHEEECCC--CCEEEccCCCccccc
Confidence 678899999999999999999855 889999999987653
|
Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development |
| >KOG1094 consensus Discoidin domain receptor DDR1 [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=98.98 E-value=7.1e-10 Score=125.53 Aligned_cols=141 Identities=19% Similarity=0.185 Sum_probs=100.3
Q ss_pred ccccccccccEEEEEEecCCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCcHHHH
Q 002031 123 ETPLATASIAQVHRATLVDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (977)
Q Consensus 123 ~~piasaSigqV~~A~l~~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea 202 (977)
.+.||+|-||.||.+....+..||||+.||+..+... -||+.|+
T Consensus 543 ~ekiGeGqFGEVhLCeveg~lkVAVK~Lr~~a~~~~r------------------------------------~~F~kEI 586 (807)
T KOG1094|consen 543 KEKIGEGQFGEVHLCEVEGPLKVAVKILRPDATKNAR------------------------------------NDFLKEI 586 (807)
T ss_pred hhhhcCcccceeEEEEecCceEEEEeecCcccchhHH------------------------------------HHHHHHH
Confidence 3689999999999999877799999999998654321 1567788
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeee-cCCceEEeeccCCCCCCChHHHHhcC-CCHHHHHHHHHHHH--
Q 002031 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAFG-VNKQKVVEEITRAY-- 278 (977)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLVmE~i~G~~L~~~~~~~~~~-~~~~~l~~~l~~~~-- 278 (977)
+-+.++++ ...+.+--|.. ...-.++|||++.+.|..+....... .+....+....+++
T Consensus 587 kiLsqLkh-----------------PNIveLvGVC~~DePicmI~EYmEnGDLnqFl~aheapt~~t~~~vsi~tqiasg 649 (807)
T KOG1094|consen 587 KILSRLKH-----------------PNIVELLGVCVQDDPLCMITEYMENGDLNQFLSAHELPTAETAPGVSICTQIASG 649 (807)
T ss_pred HHHhccCC-----------------CCeeEEEeeeecCCchHHHHHHHhcCcHHHHHHhccCcccccchhHHHHHHHHHH
Confidence 87777632 11222222211 23457899999999998875432112 23344455555544
Q ss_pred HHHHHhcCccccCCCCCCeEEccCCCCceEEEeccccccc
Q 002031 279 AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKL 318 (977)
Q Consensus 279 l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l 318 (977)
+..+-..+|+|||+-+.|+||+.+ +.+++.||||++.+
T Consensus 650 maYLes~nfVHrd~a~rNcLv~~e--~~iKiadfgmsR~l 687 (807)
T KOG1094|consen 650 MAYLESLNFVHRDLATRNCLVDGE--FTIKIADFGMSRNL 687 (807)
T ss_pred HHHHHhhchhhccccccceeecCc--ccEEecCccccccc
Confidence 666667899999999999999955 99999999999865
|
|
| >KOG0589 consensus Serine/threonine protein kinase [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.98 E-value=4.4e-10 Score=127.07 Aligned_cols=145 Identities=13% Similarity=0.154 Sum_probs=104.7
Q ss_pred cccccccccEEEEEEec-CCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCcHHHH
Q 002031 124 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (977)
Q Consensus 124 ~piasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea 202 (977)
+-+|.|+||.++..+.+ ++..+|+|..+-.- .-+.-++ +-.+|.
T Consensus 10 ~~iG~GafG~a~lvrhk~~~~~~vlK~I~l~~-----------------------------~t~~~r~------~A~~E~ 54 (426)
T KOG0589|consen 10 RQVGRGAFGSALLVRHKSDDKLYVLKKINLEK-----------------------------LTEPERR------SAIQEM 54 (426)
T ss_pred hhcCccccchhhhhhhccCCceEEEEEEeccc-----------------------------cCchhhH------HHHHHH
Confidence 46899999999998874 78899999754110 0000000 234455
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeee-cCC-ceEEeeccCCCCCCChHHHHh-cCCCHHHHHHHHHHHH-
Q 002031 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSE-TVLILEFMDGIRLNDCESLEA-FGVNKQKVVEEITRAY- 278 (977)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~-~vLVmE~i~G~~L~~~~~~~~-~~~~~~~l~~~l~~~~- 278 (977)
.-+.++.+ +..|..++.+. .+. .++||+|++|+++.+...-.. .-+..+++...++++.
T Consensus 55 ~lis~~~h-----------------P~iv~y~ds~~~~~~~l~Ivm~Y~eGg~l~~~i~~~k~~~f~E~~i~~~~~Q~~~ 117 (426)
T KOG0589|consen 55 DLLSKLLH-----------------PNIVEYKDSFEEDGQLLCIVMEYCEGGDLAQLIKEQKGVLFPEERILKWFVQILL 117 (426)
T ss_pred HHHHhccC-----------------CCeeeeccchhcCCceEEEEEeecCCCCHHHHHHHHhhccccHHHHHHHHHHHHH
Confidence 44444432 22344555443 444 689999999999998754333 3466788888888877
Q ss_pred -HHHHHhcCccccCCCCCCeEEccCCCCceEEEecccccccCHHH
Q 002031 279 -AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSSSM 322 (977)
Q Consensus 279 -l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~~~ 322 (977)
+..+|+..|+|||+|+.||+++++ +.|+|-|||+++.+..+.
T Consensus 118 av~ylH~~~iLHRDlK~~Nifltk~--~~VkLgDfGlaK~l~~~~ 160 (426)
T KOG0589|consen 118 AVNYLHENRVLHRDLKCANIFLTKD--KKVKLGDFGLAKILNPED 160 (426)
T ss_pred HHHHHHhhhhhcccchhhhhhcccc--CceeecchhhhhhcCCch
Confidence 888999999999999999999977 789999999999998765
|
|
| >cd06621 PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases | Back alignment and domain information |
|---|
Probab=98.98 E-value=2.9e-09 Score=117.67 Aligned_cols=141 Identities=16% Similarity=0.170 Sum_probs=92.2
Q ss_pred cccccccccEEEEEEec-CCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCcHHHH
Q 002031 124 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (977)
Q Consensus 124 ~piasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea 202 (977)
+.||.|++|.||++.++ +++.||+|+......... +-++.+|.
T Consensus 7 ~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~------------------------------------~~~~~~e~ 50 (287)
T cd06621 7 SRLGEGAGGSVTKCRLKNTGMIFALKTITTDPNPDL------------------------------------QKQILREL 50 (287)
T ss_pred EEeccCCceEEEEEEECCCCeEEEEEEEecCCchHH------------------------------------HHHHHHHH
Confidence 67999999999999984 689999998764321100 01234455
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeee---cCCceEEeeccCCCCCCChHHH-H--hcCCCHHHHHHHHHH
Q 002031 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ---SSETVLILEFMDGIRLNDCESL-E--AFGVNKQKVVEEITR 276 (977)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~---~~~~vLVmE~i~G~~L~~~~~~-~--~~~~~~~~l~~~l~~ 276 (977)
+.+.++.+ ..-+.+-..+. ....+|||||++|.+|.++... . ........+...+.+
T Consensus 51 ~~l~~l~h-----------------~~iv~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~l~~~~~~~i~~~ 113 (287)
T cd06621 51 EINKSCKS-----------------PYIVKYYGAFLDESSSSIGIAMEYCEGGSLDSIYKKVKKRGGRIGEKVLGKIAES 113 (287)
T ss_pred HHHHhCCC-----------------CCeeeeeeEEEccCCCeEEEEEEecCCCCHHHHHHHHHhcCCCCCHHHHHHHHHH
Confidence 55444422 01122222222 2346899999999999775331 1 112334444444444
Q ss_pred HH--HHHHHhcCccccCCCCCCeEEccCCCCceEEEecccccccC
Q 002031 277 AY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 319 (977)
Q Consensus 277 ~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~ 319 (977)
++ +..+|..|++|+|++|.||+++.+ +.++|+|||++..+.
T Consensus 114 i~~~L~~lH~~~i~H~dl~~~nil~~~~--~~~~l~dfg~~~~~~ 156 (287)
T cd06621 114 VLKGLSYLHSRKIIHRDIKPSNILLTRK--GQVKLCDFGVSGELV 156 (287)
T ss_pred HHHHHHHHHHCCcccCCCCHHHEEEecC--CeEEEeecccccccc
Confidence 33 678899999999999999999865 789999999987654
|
Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include |
| >KOG0664 consensus Nemo-like MAPK-related serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=98.98 E-value=4.7e-09 Score=108.91 Aligned_cols=47 Identities=21% Similarity=0.390 Sum_probs=40.6
Q ss_pred HHHHHhcCccccCCCCCCeEEccCCCCceEEEecccccccCHHHHHHHH
Q 002031 279 AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSSSMKQALA 327 (977)
Q Consensus 279 l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~~~r~~~~ 327 (977)
++.+|..||.|||+||||+||+.+ .-++++|||+++.-+.+++....
T Consensus 169 LKYLHsA~ILHRDIKPGNLLVNSN--CvLKICDFGLARvee~d~~~hMT 215 (449)
T KOG0664|consen 169 LKYLHTANILHRDIKPGNLLVNSN--CILKICDFGLARTWDQRDRLNMT 215 (449)
T ss_pred hHHHhhcchhhccCCCccEEeccC--ceEEecccccccccchhhhhhhH
Confidence 778899999999999999999865 78999999999988777666543
|
|
| >KOG4721 consensus Serine/threonine protein kinase, contains leucine zipper domain [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=98.98 E-value=2.3e-10 Score=128.73 Aligned_cols=160 Identities=22% Similarity=0.231 Sum_probs=107.8
Q ss_pred CCHHHHHHHHHHHhCCCCCCHHHHHHHHHHHhCCChhhcccccCccccccccccEEEEEEecCCCEEEEEEecCChhhhh
Q 002031 79 LPEPYISLLKQLQDSLPPRPVQEVSQTIEREFGESMGGMFMDFVETPLATASIAQVHRATLVDGRQVVVKVQHQGIKTII 158 (977)
Q Consensus 79 lp~~~~~~L~~Lqd~~p~~~~~~v~~~l~~elg~~~~~~f~~~d~~piasaSigqV~~A~l~~G~~VAVKv~~p~i~~~~ 158 (977)
+...|..+.++-|+..-.+||++|-.+ +=+|+|+-|.||+|+++ ++.||||-. .+.-
T Consensus 103 iGk~~s~e~k~qq~e~WeiPFe~IsEL------------------eWlGSGaQGAVF~Grl~-netVAVKKV----~elk 159 (904)
T KOG4721|consen 103 IGKAYSTEHKQQQEELWEIPFEEISEL------------------EWLGSGAQGAVFLGRLH-NETVAVKKV----RELK 159 (904)
T ss_pred hccceeeehhhhhhhhccCCHHHhhhh------------------hhhccCcccceeeeecc-CceehhHHH----hhhh
Confidence 444555556666666666666654321 34899999999999995 689999932 2233
Q ss_pred HhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCcHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeee
Q 002031 159 LEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ 238 (977)
Q Consensus 159 ~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~ 238 (977)
..|++ +++++++ ...+.+--|..
T Consensus 160 ETdIK----------------------------------------HLRkLkH-----------------~NII~FkGVCt 182 (904)
T KOG4721|consen 160 ETDIK----------------------------------------HLRKLKH-----------------PNIITFKGVCT 182 (904)
T ss_pred hhhHH----------------------------------------HHHhccC-----------------cceeeEeeeec
Confidence 33443 3333322 01111212211
Q ss_pred -cCCceEEeeccCCCCCCChHHHHhcCCCHHHHHHHHHHHH--HHHHHhcCccccCCCCCCeEEccCCCCceEEEecccc
Q 002031 239 -SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLT 315 (977)
Q Consensus 239 -~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~ 315 (977)
+.-.+++||||.-+.|..+.. ....+.+..++.....+. +.++|.+.|||||+|.-||||..+ ..|+|.|||..
T Consensus 183 qsPcyCIiMEfCa~GqL~~VLk-a~~~itp~llv~Wsk~IA~GM~YLH~hKIIHRDLKSPNiLIs~~--d~VKIsDFGTS 259 (904)
T KOG4721|consen 183 QSPCYCIIMEFCAQGQLYEVLK-AGRPITPSLLVDWSKGIAGGMNYLHLHKIIHRDLKSPNILISYD--DVVKISDFGTS 259 (904)
T ss_pred CCceeEEeeeccccccHHHHHh-ccCccCHHHHHHHHHHhhhhhHHHHHhhHhhhccCCCceEeecc--ceEEeccccch
Confidence 122479999999888887743 223456777777666655 888999999999999999999966 67999999999
Q ss_pred cccCHH
Q 002031 316 KKLSSS 321 (977)
Q Consensus 316 ~~l~~~ 321 (977)
+.+++.
T Consensus 260 ~e~~~~ 265 (904)
T KOG4721|consen 260 KELSDK 265 (904)
T ss_pred Hhhhhh
Confidence 888765
|
|
| >cd08227 PK_STRAD_alpha Pseudokinase domain of STE20-related kinase adapter protein alpha | Back alignment and domain information |
|---|
Probab=98.97 E-value=2.9e-09 Score=120.16 Aligned_cols=78 Identities=14% Similarity=0.135 Sum_probs=59.6
Q ss_pred cCCceEEeeccCCCCCCChHHHH-hcCCCHHHHHHHHHHHH--HHHHHhcCccccCCCCCCeEEccCCCCceEEEecccc
Q 002031 239 SSETVLILEFMDGIRLNDCESLE-AFGVNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLT 315 (977)
Q Consensus 239 ~~~~vLVmE~i~G~~L~~~~~~~-~~~~~~~~l~~~l~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~ 315 (977)
....++||||++|.+|.++.... ..+++...+...+.++. +..+|..|++|+|+||.||+++.+ +++++.|||..
T Consensus 71 ~~~~~lv~e~~~~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~iiH~dlkp~Nil~~~~--~~~~l~~~~~~ 148 (327)
T cd08227 71 DNELWVVTSFMAYGSAKDLICTHFMDGMSELAIAYILQGVLKALDYIHHMGYVHRSVKASHILISVD--GKVYLSGLRSN 148 (327)
T ss_pred CCEEEEEEeccCCCcHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCChhhEEEecC--CcEEEcccchh
Confidence 45678999999999998875322 12355555555555544 788999999999999999999865 88999999875
Q ss_pred ccc
Q 002031 316 KKL 318 (977)
Q Consensus 316 ~~l 318 (977)
..+
T Consensus 149 ~~~ 151 (327)
T cd08227 149 LSM 151 (327)
T ss_pred hcc
Confidence 443
|
Protein Kinase family, STE20-related kinase adapter protein (STRAD) alpha subfamily, pseudokinase domain. The STRAD alpha subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hype |
| >cd05100 PTKc_FGFR3 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 3 | Back alignment and domain information |
|---|
Probab=98.97 E-value=3e-09 Score=120.46 Aligned_cols=79 Identities=15% Similarity=0.197 Sum_probs=57.6
Q ss_pred cCCceEEeeccCCCCCCChHHHHh---------------cCCCHHHHHHHHHHHH--HHHHHhcCccccCCCCCCeEEcc
Q 002031 239 SSETVLILEFMDGIRLNDCESLEA---------------FGVNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSK 301 (977)
Q Consensus 239 ~~~~vLVmE~i~G~~L~~~~~~~~---------------~~~~~~~l~~~l~~~~--l~~i~~~G~~H~D~hPgNIlv~~ 301 (977)
....+++|||++|.+|.++..... ..+....+...+.++. +..+|..|++|+|++|.||+++.
T Consensus 90 ~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~givH~dlkp~Nill~~ 169 (334)
T cd05100 90 DGPLYVLVEYASKGNLREYLRARRPPGMDYSFDTCKLPEEQLTFKDLVSCAYQVARGMEYLASQKCIHRDLAARNVLVTE 169 (334)
T ss_pred CCceEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHHHCCeeccccccceEEEcC
Confidence 345689999999999887643211 1123333333333333 67889999999999999999986
Q ss_pred CCCCceEEEecccccccC
Q 002031 302 DPPHRPILLDFGLTKKLS 319 (977)
Q Consensus 302 ~~~g~i~LiDFG~~~~l~ 319 (977)
+ +.++|+|||+++.+.
T Consensus 170 ~--~~~kL~Dfg~~~~~~ 185 (334)
T cd05100 170 D--NVMKIADFGLARDVH 185 (334)
T ss_pred C--CcEEECCcccceecc
Confidence 5 899999999987664
|
Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 3 (FGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR3 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to |
| >cd05123 STKc_AGC Catalytic domain of AGC family Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=98.97 E-value=3.5e-09 Score=113.95 Aligned_cols=78 Identities=28% Similarity=0.294 Sum_probs=59.2
Q ss_pred CCceEEeeccCCCCCCChHHHHhcCCCHHHHHHHHHHHH--HHHHHhcCccccCCCCCCeEEccCCCCceEEEecccccc
Q 002031 240 SETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKK 317 (977)
Q Consensus 240 ~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~ 317 (977)
...++||||++|.+|.+..... ...+...+...+.+++ +..+|..|++|+|++|.||+++.+ +.++|+|||++..
T Consensus 66 ~~~~~v~e~~~~~~L~~~l~~~-~~l~~~~~~~~~~qi~~~l~~lh~~~~~H~~l~p~ni~~~~~--~~~~l~d~~~~~~ 142 (250)
T cd05123 66 EKLYLVLEYAPGGELFSHLSKE-GRFSEERARFYAAEIVLALEYLHSLGIIYRDLKPENILLDAD--GHIKLTDFGLAKE 142 (250)
T ss_pred CeeEEEEecCCCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCcceEEEcCC--CcEEEeecCccee
Confidence 4458999999999887764321 2345555555444443 778899999999999999999865 8899999999877
Q ss_pred cCH
Q 002031 318 LSS 320 (977)
Q Consensus 318 l~~ 320 (977)
...
T Consensus 143 ~~~ 145 (250)
T cd05123 143 LSS 145 (250)
T ss_pred ccc
Confidence 644
|
Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the |
| >cd07851 STKc_p38 Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase | Back alignment and domain information |
|---|
Probab=98.97 E-value=1.9e-09 Score=122.61 Aligned_cols=75 Identities=23% Similarity=0.380 Sum_probs=56.2
Q ss_pred CceEEeeccCCCCCCChHHHHhcCCCHHHHHHHHHHHH--HHHHHhcCccccCCCCCCeEEccCCCCceEEEeccccccc
Q 002031 241 ETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKL 318 (977)
Q Consensus 241 ~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l 318 (977)
..++||||+ |.+|.++. ....++...+...+.+++ +..+|..|++|+|++|.||+++.+ ++++|+|||++..+
T Consensus 94 ~~~lv~e~~-~~~L~~~~--~~~~l~~~~~~~~~~ql~~aL~~LH~~gi~H~dlkp~Nill~~~--~~~kL~dfg~~~~~ 168 (343)
T cd07851 94 DVYLVTHLM-GADLNNIV--KCQKLSDDHIQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNED--CELKILDFGLARHT 168 (343)
T ss_pred cEEEEEecC-CCCHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEECCC--CCEEEccccccccc
Confidence 357999999 55666553 233455555555444443 678999999999999999999865 89999999998876
Q ss_pred CH
Q 002031 319 SS 320 (977)
Q Consensus 319 ~~ 320 (977)
..
T Consensus 169 ~~ 170 (343)
T cd07851 169 DD 170 (343)
T ss_pred cc
Confidence 43
|
Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK |
| >cd07835 STKc_CDK1_like Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=98.97 E-value=1.9e-09 Score=118.63 Aligned_cols=141 Identities=16% Similarity=0.185 Sum_probs=90.5
Q ss_pred cccccccccEEEEEEec-CCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCcHHHH
Q 002031 124 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (977)
Q Consensus 124 ~piasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea 202 (977)
+.||.|++|+||+|+.+ +|+.||||+.+.+....- ..-++.+|.
T Consensus 5 ~~l~~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~-----------------------------------~~~~~~~E~ 49 (283)
T cd07835 5 EKIGEGTYGVVYKARDKLTGEIVALKKIRLETEDEG-----------------------------------VPSTAIREI 49 (283)
T ss_pred eEecCCCCeEEEEEEEcCCCCEEEEEEeeccccccc-----------------------------------chhHHHHHH
Confidence 46899999999999974 899999998754321100 000133344
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeee-cCCceEEeeccCCCCCCChHHHHh-cCCCHHHHHHHHHHHH--
Q 002031 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLEA-FGVNKQKVVEEITRAY-- 278 (977)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLVmE~i~G~~L~~~~~~~~-~~~~~~~l~~~l~~~~-- 278 (977)
..+.++.+ ..-+.+...+. ....+++|||+++ +|.++..... ..++...+...+.+++
T Consensus 50 ~~l~~l~~-----------------~~iv~~~~~~~~~~~~~iv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~i~~~ 111 (283)
T cd07835 50 SLLKELNH-----------------PNIVRLLDVVHSENKLYLVFEFLDL-DLKKYMDSSPLTGLDPPLIKSYLYQLLQG 111 (283)
T ss_pred HHHHhcCC-----------------CCccCHhheeccCCeEEEEEeccCc-CHHHHHhhCCCCCCCHHHHHHHHHHHHHH
Confidence 44444321 00111222222 4556899999964 6665532111 1345555555555444
Q ss_pred HHHHHhcCccccCCCCCCeEEccCCCCceEEEecccccccC
Q 002031 279 AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 319 (977)
Q Consensus 279 l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~ 319 (977)
+..+|..|++|+|++|.||+++.+ +.++|+|||++..+.
T Consensus 112 L~~lH~~~~~H~dl~p~nil~~~~--~~~~l~df~~~~~~~ 150 (283)
T cd07835 112 IAYCHSHRVLHRDLKPQNLLIDRE--GALKLADFGLARAFG 150 (283)
T ss_pred HHHHHHCCeeCCCCCHHHEEEcCC--CcEEEeecccccccC
Confidence 788999999999999999999865 899999999987654
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyc |
| >KOG1006 consensus Mitogen-activated protein kinase (MAPK) kinase MKK4 [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=98.96 E-value=1.6e-10 Score=119.77 Aligned_cols=140 Identities=18% Similarity=0.201 Sum_probs=83.1
Q ss_pred cccccccccEEEEEEec-CCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCcHHHH
Q 002031 124 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (977)
Q Consensus 124 ~piasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea 202 (977)
.-||.|+||.|++-+.+ +|+..|||-.+-...+ .+. .++..|+|-...+
T Consensus 70 g~iG~G~fG~V~KM~hk~sg~~mAVKrIr~~n~~---keq---------------------------~rll~e~d~~mks 119 (361)
T KOG1006|consen 70 GEIGNGAFGTVNKMLHKPSGKLMAVKRIRSNNIE---KEQ---------------------------KRLLMEHDTVMKS 119 (361)
T ss_pred HHhcCCcchhhhhhhcCccCcEEEEEEeeeccch---HHH---------------------------HHHHHHHHHHHhh
Confidence 56899999999999874 8999999976643321 111 1111222222222
Q ss_pred H---HHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeeecCCceEEeeccCCCCCCChHH----HHhcCCCHHHHHHH--
Q 002031 203 E---NTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQSSETVLILEFMDGIRLNDCES----LEAFGVNKQKVVEE-- 273 (977)
Q Consensus 203 ~---n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~~~~~vLVmE~i~G~~L~~~~~----~~~~~~~~~~l~~~-- 273 (977)
. |+.+|...+- ..+.-++.||.++ .+++.+-. .....+..+-+...
T Consensus 120 ~~cp~IVkfyGa~F------------------------~EGdcWiCMELMd-~SlDklYk~vy~vq~~~ipE~Ilg~Itv 174 (361)
T KOG1006|consen 120 SNCPNIVKFYGALF------------------------SEGDCWICMELMD-ISLDKLYKRVYSVQKSRIPENILGHITV 174 (361)
T ss_pred cCCcHHHHHhhhhh------------------------cCCceeeeHHHHh-hhHHHHHHHHHHHHhccCcHhhhhheee
Confidence 2 3444433221 1566789999996 45443311 11112222211111
Q ss_pred -HHHHHHHHHH-hcCccccCCCCCCeEEccCCCCceEEEecccccccCHH
Q 002031 274 -ITRAYAHQIY-VDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSSS 321 (977)
Q Consensus 274 -l~~~~l~~i~-~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~~ 321 (977)
.+++ +..+- +..++|||+||.|||++.. |.|+|+|||+++++-+.
T Consensus 175 atV~A-L~yLK~~lkiIHRDvKPSNILldr~--G~vKLCDFGIcGqLv~S 221 (361)
T KOG1006|consen 175 ATVDA-LDYLKEELKIIHRDVKPSNILLDRH--GDVKLCDFGICGQLVDS 221 (361)
T ss_pred eehhH-HHHHHHHhhhhhccCChhheEEecC--CCEeeecccchHhHHHH
Confidence 1222 33332 4689999999999999966 89999999999987553
|
|
| >cd05046 PTK_CCK4 Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4 | Back alignment and domain information |
|---|
Probab=98.96 E-value=3.3e-09 Score=116.19 Aligned_cols=137 Identities=19% Similarity=0.185 Sum_probs=91.3
Q ss_pred cccccccccEEEEEEec------CCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccC
Q 002031 124 TPLATASIAQVHRATLV------DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELD 197 (977)
Q Consensus 124 ~piasaSigqV~~A~l~------~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld 197 (977)
+-+|.|++|.||+|+.+ +.+.|++|+....-... ..+ +
T Consensus 11 ~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~~~~~--------------------------~~~----------~ 54 (275)
T cd05046 11 TTLGRGEFGEVFLAKAKGIEEEGGETLVLVKALQKTKDEN--------------------------LQS----------E 54 (275)
T ss_pred eeecccceeEEEEEEeccCCcCCCcceEEEEccCCccchH--------------------------HHH----------H
Confidence 45899999999999964 34679999754321110 001 2
Q ss_pred cHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeee----cCCceEEeeccCCCCCCChHHHHhc--------CC
Q 002031 198 FNSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ----SSETVLILEFMDGIRLNDCESLEAF--------GV 265 (977)
Q Consensus 198 ~~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~----~~~~vLVmE~i~G~~L~~~~~~~~~--------~~ 265 (977)
+.+|++.+.++.+ ..+++++. ....++||||++|.+|.++...... .+
T Consensus 55 ~~~E~~~l~~l~h--------------------~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~l 114 (275)
T cd05046 55 FRRELDMFRKLSH--------------------KNVVRLLGLCREAEPHYMILEYTDLGDLKQFLRATKSKDEKLKPPPL 114 (275)
T ss_pred HHHHHHHHHhcCC--------------------cceeeeEEEECCCCcceEEEEecCCCcHHHHHHhcccccccccccCC
Confidence 4455555555432 11223332 3557999999999999877542221 24
Q ss_pred CHHHHHHHHHHHH--HHHHHhcCccccCCCCCCeEEccCCCCceEEEeccccccc
Q 002031 266 NKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKL 318 (977)
Q Consensus 266 ~~~~l~~~l~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l 318 (977)
....+...+.++. +..+|..|++|+|+||.||+++.+ +.+++.|||++...
T Consensus 115 ~~~~~~~~~~~l~~~l~~LH~~~i~H~dlkp~Nili~~~--~~~~l~~~~~~~~~ 167 (275)
T cd05046 115 STKQKVALCTQIALGMDHLSNARFVHRDLAARNCLVSSQ--REVKVSLLSLSKDV 167 (275)
T ss_pred CHHHHHHHHHHHHHHHHHhhhcCcccCcCccceEEEeCC--CcEEEccccccccc
Confidence 4555554444443 788999999999999999999865 88999999987644
|
Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is s |
| >cd08220 STKc_Nek8 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8 | Back alignment and domain information |
|---|
Probab=98.96 E-value=2.4e-09 Score=115.67 Aligned_cols=143 Identities=17% Similarity=0.196 Sum_probs=93.2
Q ss_pred cccccccccEEEEEEe-cCCCEEEEEEecCCh-hhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCcHHH
Q 002031 124 TPLATASIAQVHRATL-VDGRQVVVKVQHQGI-KTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSE 201 (977)
Q Consensus 124 ~piasaSigqV~~A~l-~~G~~VAVKv~~p~i-~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~E 201 (977)
+.||.|++|.||+|.. .+++.||||+..... .... .-.+.+|
T Consensus 6 ~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~------------------------------------~~~~~~e 49 (256)
T cd08220 6 RVVGRGAFGIVHLCRRKADQKLVIIKQIPVEQMTKDE------------------------------------RLAAQNE 49 (256)
T ss_pred EEecccCceEEEEEEEcCCCcEEEEEEEeccccccHH------------------------------------HHHHHHH
Confidence 5799999999999987 478999999865321 1000 0023344
Q ss_pred HHHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeee-cCCceEEeeccCCCCCCChHHHHh-cCCCHHHHHHHHHHHH-
Q 002031 202 AENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLEA-FGVNKQKVVEEITRAY- 278 (977)
Q Consensus 202 a~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLVmE~i~G~~L~~~~~~~~-~~~~~~~l~~~l~~~~- 278 (977)
++.+.++.+ ..-+.+...+. ....++||||++|.+|.++..... ...+...+...+.+++
T Consensus 50 ~~~l~~~~~-----------------~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~ 112 (256)
T cd08220 50 CQVLKLLSH-----------------PNIIEYYENFLEDKALMIVMEYAPGGTLAEYIQKRCNSLLDEDTILHFFVQILL 112 (256)
T ss_pred HHHHhhCCC-----------------CchhheeeeEecCCEEEEEEecCCCCCHHHHHHHhcccCCCHHHHHHHHHHHHH
Confidence 444444321 00111112222 455689999999999988754321 2245555555444443
Q ss_pred -HHHHHhcCccccCCCCCCeEEccCCCCceEEEecccccccCH
Q 002031 279 -AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 320 (977)
Q Consensus 279 -l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 320 (977)
+..+|..|++|+|++|+||+++.+ ++.++|+|||++..+..
T Consensus 113 ~l~~lh~~~i~h~dl~~~nil~~~~-~~~~~l~d~~~~~~~~~ 154 (256)
T cd08220 113 ALHHVHTKLILHRDLKTQNILLDKH-KMVVKIGDFGISKILSS 154 (256)
T ss_pred HHHHHHhCCeecCCCCHHHEEEcCC-CCEEEEccCCCceecCC
Confidence 678899999999999999999854 35689999999987754
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with |
| >PHA03390 pk1 serine/threonine-protein kinase 1; Provisional | Back alignment and domain information |
|---|
Probab=98.96 E-value=4e-09 Score=115.39 Aligned_cols=79 Identities=22% Similarity=0.278 Sum_probs=61.9
Q ss_pred cCCceEEeeccCCCCCCChHHHHhcCCCHHHHHHHHHHHH--HHHHHhcCccccCCCCCCeEEccCCCC-ceEEEecccc
Q 002031 239 SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPH-RPILLDFGLT 315 (977)
Q Consensus 239 ~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g-~i~LiDFG~~ 315 (977)
....++||||++|.+|.++.... ..++...+...+.+++ +..+|..|++|+|++|.||+++.+ + +++|+|||++
T Consensus 81 ~~~~~iv~e~~~~~~L~~~l~~~-~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~nil~~~~--~~~~~l~dfg~~ 157 (267)
T PHA03390 81 LKGHVLIMDYIKDGDLFDLLKKE-GKLSEAEVKKIIRQLVEALNDLHKHNIIHNDIKLENVLYDRA--KDRIYLCDYGLC 157 (267)
T ss_pred CCeeEEEEEcCCCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHEEEeCC--CCeEEEecCccc
Confidence 45678999999999998764322 2456666666555554 788999999999999999999865 5 8999999998
Q ss_pred cccCH
Q 002031 316 KKLSS 320 (977)
Q Consensus 316 ~~l~~ 320 (977)
..+..
T Consensus 158 ~~~~~ 162 (267)
T PHA03390 158 KIIGT 162 (267)
T ss_pred eecCC
Confidence 77653
|
|
| >KOG0194 consensus Protein tyrosine kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=98.95 E-value=1.4e-09 Score=125.27 Aligned_cols=140 Identities=19% Similarity=0.201 Sum_probs=98.3
Q ss_pred cccccccccEEEEEEec--CC---CEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCc
Q 002031 124 TPLATASIAQVHRATLV--DG---RQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDF 198 (977)
Q Consensus 124 ~piasaSigqV~~A~l~--~G---~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~ 198 (977)
+-||+|.||.||+|+++ ++ ..||||..+-.- ... + .+-.+|
T Consensus 163 kkLGeGaFGeV~~G~l~~~~~~~~~~VAvK~~k~~~--~~~--------------------------~------~~~~e~ 208 (474)
T KOG0194|consen 163 KKLGEGAFGEVFKGKLKLKNGFKVVPVAVKTTKGSS--ELT--------------------------K------EQIKEF 208 (474)
T ss_pred ceeecccccEEEEEEEEecCCceeeeeEEEeecccc--ccc--------------------------H------HHHHHH
Confidence 78999999999999985 33 238999654210 000 0 011257
Q ss_pred HHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeee----cCCceEEeeccCCCCCCChHHHHhcCCCHHHHHHHH
Q 002031 199 NSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ----SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEI 274 (977)
Q Consensus 199 ~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~----~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l 274 (977)
.+||+-+..+.| ..|-+.|. ....+||||+|.|++|.+...-....++..+-..-+
T Consensus 209 m~EArvMr~l~H--------------------~NVVr~yGVa~~~~Pl~ivmEl~~gGsL~~~L~k~~~~v~~~ek~~~~ 268 (474)
T KOG0194|consen 209 MKEARVMRQLNH--------------------PNVVRFYGVAVLEEPLMLVMELCNGGSLDDYLKKNKKSLPTLEKLRFC 268 (474)
T ss_pred HHHHHHHHhCCC--------------------CCEEEEEEEEcCCCccEEEEEecCCCcHHHHHHhCCCCCCHHHHHHHH
Confidence 789888776543 23334443 566799999999999998854332235555555555
Q ss_pred HHHH--HHHHHhcCccccCCCCCCeEEccCCCCceEEEecccccccC
Q 002031 275 TRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 319 (977)
Q Consensus 275 ~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~ 319 (977)
.++. ++.||..+++||||=..|+|++.+ +.+++.|||+++.-+
T Consensus 269 ~~AA~Gl~YLh~k~~IHRDIAARNcL~~~~--~~vKISDFGLs~~~~ 313 (474)
T KOG0194|consen 269 YDAARGLEYLHSKNCIHRDIAARNCLYSKK--GVVKISDFGLSRAGS 313 (474)
T ss_pred HHHHhHHHHHHHCCCcchhHhHHHheecCC--CeEEeCccccccCCc
Confidence 5554 888999999999999999999865 667999999977654
|
|
| >KOG0670 consensus U4/U6-associated splicing factor PRP4 [RNA processing and modification] | Back alignment and domain information |
|---|
Probab=98.95 E-value=1.1e-09 Score=122.36 Aligned_cols=146 Identities=20% Similarity=0.263 Sum_probs=89.3
Q ss_pred ccccccccEEEEEEe-cCCCEEEEEEecCCh--hhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCcHHH
Q 002031 125 PLATASIAQVHRATL-VDGRQVVVKVQHQGI--KTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSE 201 (977)
Q Consensus 125 piasaSigqV~~A~l-~~G~~VAVKv~~p~i--~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~E 201 (977)
-.|.|-|+.|.+|.. .-|+.|||||++-+- -+.=..++.+|+++... .| ..
T Consensus 439 ~~GkGvFs~Vvra~D~~r~~~vAiKIIRnNE~M~KtGl~EleiLkKL~~A----D~---------------------Ed- 492 (752)
T KOG0670|consen 439 YTGKGVFSTVVRARDQARGQEVAIKIIRNNEVMHKTGLKELEILKKLNDA----DP---------------------ED- 492 (752)
T ss_pred ccccceeeeeeeccccCCCCeeEEEEeecchHHhhhhhHHHHHHHHhhcc----Cc---------------------hh-
Confidence 469999999999997 468899999998652 22223455666555320 01 00
Q ss_pred HHHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeeecCCceEEeeccCCCCCCChHHHHhcCCC----HHHHHHHHHHH
Q 002031 202 AENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQSSETVLILEFMDGIRLNDCESLEAFGVN----KQKVVEEITRA 277 (977)
Q Consensus 202 a~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~~~~~vLVmE~i~G~~L~~~~~~~~~~~~----~~~l~~~l~~~ 277 (977)
-.++.++...|.+ -...+||+|-+. ..|.++ +...|.+ ...+-...-++
T Consensus 493 k~Hclrl~r~F~h------------------------knHLClVFE~Ls-lNLRev--LKKyG~nvGL~ikaVRsYaqQL 545 (752)
T KOG0670|consen 493 KFHCLRLFRHFKH------------------------KNHLCLVFEPLS-LNLREV--LKKYGRNVGLHIKAVRSYAQQL 545 (752)
T ss_pred hhHHHHHHHHhhh------------------------cceeEEEehhhh-chHHHH--HHHhCcccceeehHHHHHHHHH
Confidence 1234444333321 223467877652 344444 3343322 23222222222
Q ss_pred H--HHHHHhcCccccCCCCCCeEEccCCCCceEEEecccccccCHHHHH
Q 002031 278 Y--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSSSMKQ 324 (977)
Q Consensus 278 ~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~~~r~ 324 (977)
| ++.+-..||+|+||||.||||++. ...++|||||.+...++.+..
T Consensus 546 flALklLK~c~vlHaDIKPDNiLVNE~-k~iLKLCDfGSA~~~~eneit 593 (752)
T KOG0670|consen 546 FLALKLLKKCGVLHADIKPDNILVNES-KNILKLCDFGSASFASENEIT 593 (752)
T ss_pred HHHHHHHHhcCeeecccCccceEeccC-cceeeeccCcccccccccccc
Confidence 2 455557999999999999999865 467899999999998776544
|
|
| >cd07831 STKc_MOK Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase | Back alignment and domain information |
|---|
Probab=98.95 E-value=3.2e-09 Score=116.54 Aligned_cols=140 Identities=19% Similarity=0.254 Sum_probs=88.9
Q ss_pred cccccccccEEEEEEec-CCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCcHHHH
Q 002031 124 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (977)
Q Consensus 124 ~piasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea 202 (977)
+.+|.|++|+||+|+.+ +++.||||+.+....... +....+|.
T Consensus 5 ~~lg~g~~~~v~~~~~~~~~~~~aik~~~~~~~~~~------------------------------------~~~~~~e~ 48 (282)
T cd07831 5 GKIGEGTFSEVLKAQSRKTGKYYAIKCMKKHFKSLE------------------------------------QVNNLREI 48 (282)
T ss_pred eeccccccceEEEEEEcCCCcEEEEEEehhccCCch------------------------------------hhhHHHHH
Confidence 46899999999999974 789999998654221100 00112233
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeee-c--CCceEEeeccCCCCCCChHHHHhcCCCHHHHHHHHHHHH-
Q 002031 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-S--SETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY- 278 (977)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~--~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~- 278 (977)
..+.++.+ ...-+.+...+. . ...++||||++| ++.+........++...+...+.+++
T Consensus 49 ~~l~~l~~----------------h~~i~~~~~~~~~~~~~~~~lv~e~~~~-~l~~~l~~~~~~~~~~~~~~~~~qi~~ 111 (282)
T cd07831 49 QALRRLSP----------------HPNILRLIEVLFDRKTGRLALVFELMDM-NLYELIKGRKRPLPEKRVKSYMYQLLK 111 (282)
T ss_pred HHHhhcCC----------------CCCccceEEEEecCCCCcEEEEEecCCc-cHHHHHHhccCCCCHHHHHHHHHHHHH
Confidence 33333321 001122222222 2 567899999987 44433221122345556555555544
Q ss_pred -HHHHHhcCccccCCCCCCeEEccCCCCceEEEecccccccC
Q 002031 279 -AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 319 (977)
Q Consensus 279 -l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~ 319 (977)
+..+|..|++|+|++|.||+++. +.++|+|||.+..+.
T Consensus 112 ~L~~LH~~~i~H~dl~p~ni~l~~---~~~kl~dfg~~~~~~ 150 (282)
T cd07831 112 SLDHMHRNGIFHRDIKPENILIKD---DILKLADFGSCRGIY 150 (282)
T ss_pred HHHHHHHCCceecccCHHHEEEcC---CCeEEEecccccccc
Confidence 78899999999999999999984 789999999987663
|
Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation. |
| >PLN00009 cyclin-dependent kinase A; Provisional | Back alignment and domain information |
|---|
Probab=98.95 E-value=2.9e-09 Score=117.94 Aligned_cols=138 Identities=14% Similarity=0.155 Sum_probs=86.6
Q ss_pred cccccccccEEEEEEec-CCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCcHHHH
Q 002031 124 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (977)
Q Consensus 124 ~piasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea 202 (977)
+.||.|++|.||+|+.+ +|+.||||+.+...... ...-.+.+|+
T Consensus 8 ~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~-----------------------------------~~~~~~~~e~ 52 (294)
T PLN00009 8 EKIGEGTYGVVYKARDRVTNETIALKKIRLEQEDE-----------------------------------GVPSTAIREI 52 (294)
T ss_pred EEecCCCCEEEEEEEecCCCcEEEEEehhhccccc-----------------------------------cchHHHHHHH
Confidence 57899999999999975 79999999754211100 0001234455
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceee---e-cCCceEEeeccCCCCCCChHHHHh-cCCCHHHHHHHHHHH
Q 002031 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVI---Q-SSETVLILEFMDGIRLNDCESLEA-FGVNKQKVVEEITRA 277 (977)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~---~-~~~~vLVmE~i~G~~L~~~~~~~~-~~~~~~~l~~~l~~~ 277 (977)
+.+.++.+ -.+++++ . ....++||||+++ ++.+...... ...+...+...+.++
T Consensus 53 ~~l~~l~h--------------------~~i~~~~~~~~~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~qi 111 (294)
T PLN00009 53 SLLKEMQH--------------------GNIVRLQDVVHSEKRLYLVFEYLDL-DLKKHMDSSPDFAKNPRLIKTYLYQI 111 (294)
T ss_pred HHHHhccC--------------------CCEeeEEEEEecCCeEEEEEecccc-cHHHHHHhCCCCCcCHHHHHHHHHHH
Confidence 55554432 1133333 2 4567899999975 4544321111 112333333333333
Q ss_pred H--HHHHHhcCccccCCCCCCeEEccCCCCceEEEeccccccc
Q 002031 278 Y--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKL 318 (977)
Q Consensus 278 ~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l 318 (977)
+ +..+|..|++|+|++|.||+++.+ ++.++|+|||++..+
T Consensus 112 ~~aL~~LH~~~i~H~dl~p~nill~~~-~~~~kl~dfg~~~~~ 153 (294)
T PLN00009 112 LRGIAYCHSHRVLHRDLKPQNLLIDRR-TNALKLADFGLARAF 153 (294)
T ss_pred HHHHHHHHhCCeeCCCCCcceEEEECC-CCEEEEccccccccc
Confidence 2 788999999999999999999854 367999999998755
|
|
| >KOG0668 consensus Casein kinase II, alpha subunit [Signal transduction mechanisms; Cell cycle control, cell division, chromosome partitioning; Transcription] | Back alignment and domain information |
|---|
Probab=98.94 E-value=6e-10 Score=113.07 Aligned_cols=142 Identities=15% Similarity=0.222 Sum_probs=94.9
Q ss_pred cccccccccEEEEEEe-cCCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCcHHHH
Q 002031 124 TPLATASIAQVHRATL-VDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (977)
Q Consensus 124 ~piasaSigqV~~A~l-~~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea 202 (977)
+.+|.|.++.|+.|+. .+.++++||+++|--.+.|.+++++|+.+.. +-
T Consensus 44 rk~GRGKYSEVFeg~~~~~~eK~ViKiLKPVkkkKIkREikIL~nL~g-------g~----------------------- 93 (338)
T KOG0668|consen 44 RKVGRGKYSEVFEGINITNNEKCVIKILKPVKKKKIKREIKILQNLRG-------GP----------------------- 93 (338)
T ss_pred HHHcCccHhhHhcccccCCCceEEEeeechHHHHHHHHHHHHHHhccC-------CC-----------------------
Confidence 5789999999999985 5789999999999888888888887776531 11
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeeecCCceEEeeccCCCCCCChHHHHhcCCCHHHHHHHHHHHHHHHH
Q 002031 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQSSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAYAHQI 282 (977)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~l~~i 282 (977)
|+..+-.... .+. |...-|+.||++......+-. .-...+.......++.+ +...
T Consensus 94 -NIi~L~DiV~--------------Dp~--------SktpaLiFE~v~n~Dfk~ly~-tl~d~dIryY~~elLkA-LdyC 148 (338)
T KOG0668|consen 94 -NIIKLLDIVK--------------DPE--------SKTPSLIFEYVNNTDFKQLYP-TLTDYDIRYYIYELLKA-LDYC 148 (338)
T ss_pred -Ceeehhhhhc--------------Ccc--------ccCchhHhhhhccccHHHHhh-hhchhhHHHHHHHHHHH-HhHH
Confidence 1111111100 000 333458999998865544311 00112222222233332 6677
Q ss_pred HhcCccccCCCCCCeEEccCCCCceEEEecccccccCHH
Q 002031 283 YVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSSS 321 (977)
Q Consensus 283 ~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~~ 321 (977)
|..||+|||+||.|+||+.. ..++.|||||++..+-+.
T Consensus 149 HS~GImHRDVKPhNvmIdh~-~rkLrlIDWGLAEFYHp~ 186 (338)
T KOG0668|consen 149 HSMGIMHRDVKPHNVMIDHE-LRKLRLIDWGLAEFYHPG 186 (338)
T ss_pred HhcCcccccCCcceeeechh-hceeeeeecchHhhcCCC
Confidence 89999999999999999975 467999999998776553
|
|
| >cd07830 STKc_MAK_like Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=98.94 E-value=3.6e-09 Score=116.28 Aligned_cols=79 Identities=25% Similarity=0.350 Sum_probs=57.8
Q ss_pred cCCceEEeeccCCCCCCChHHHHh-cCCCHHHHHHHHHHHH--HHHHHhcCccccCCCCCCeEEccCCCCceEEEecccc
Q 002031 239 SSETVLILEFMDGIRLNDCESLEA-FGVNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLT 315 (977)
Q Consensus 239 ~~~~vLVmE~i~G~~L~~~~~~~~-~~~~~~~l~~~l~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~ 315 (977)
....++||||+ +.++.+...... ..++...+...+.+++ +..+|..|++|+|++|.||+++++ +.++|+|||.+
T Consensus 70 ~~~~~lv~e~~-~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~Lh~~~i~H~dl~~~ni~i~~~--~~~~l~d~~~~ 146 (283)
T cd07830 70 NDELYFVFEYM-EGNLYQLMKDRKGKPFSESVIRSIIYQILQGLAHIHKHGFFHRDLKPENLLVSGP--EVVKIADFGLA 146 (283)
T ss_pred CCcEEEEEecC-CCCHHHHHHhcccccCCHHHHHHHHHHHHHHHHHHHHCCcccCCCChhhEEEcCC--CCEEEeecccc
Confidence 35568999999 556655432211 2345555555555544 778899999999999999999865 89999999998
Q ss_pred cccCH
Q 002031 316 KKLSS 320 (977)
Q Consensus 316 ~~l~~ 320 (977)
..+..
T Consensus 147 ~~~~~ 151 (283)
T cd07830 147 REIRS 151 (283)
T ss_pred eeccC
Confidence 76643
|
Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertili |
| >cd05092 PTKc_TrkA Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A | Back alignment and domain information |
|---|
Probab=98.94 E-value=3e-09 Score=117.09 Aligned_cols=79 Identities=15% Similarity=0.166 Sum_probs=58.3
Q ss_pred cCCceEEeeccCCCCCCChHHHHh--------------cCCCHHHHHHHHHHHH--HHHHHhcCccccCCCCCCeEEccC
Q 002031 239 SSETVLILEFMDGIRLNDCESLEA--------------FGVNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKD 302 (977)
Q Consensus 239 ~~~~vLVmE~i~G~~L~~~~~~~~--------------~~~~~~~l~~~l~~~~--l~~i~~~G~~H~D~hPgNIlv~~~ 302 (977)
....+++|||++|.+|.++..... ..++...+...+.++. +..+|..|++|+|+||.||+++++
T Consensus 79 ~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~~i~H~dlkp~nil~~~~ 158 (280)
T cd05092 79 GRPLLMVFEYMRHGDLNRFLRSHGPDAKILAGGEDVAPGQLTLGQMLAIASQIASGMVYLASLHFVHRDLATRNCLVGQG 158 (280)
T ss_pred CCceEEEEecCCCCCHHHHHHhcCcchhhhcccccCCccccCHHHHHHHHHHHHHHHHHHHHCCeecccccHhhEEEcCC
Confidence 455789999999999987643211 1133444444444433 678899999999999999999865
Q ss_pred CCCceEEEecccccccC
Q 002031 303 PPHRPILLDFGLTKKLS 319 (977)
Q Consensus 303 ~~g~i~LiDFG~~~~l~ 319 (977)
+.++|+|||++..+.
T Consensus 159 --~~~kL~dfg~~~~~~ 173 (280)
T cd05092 159 --LVVKIGDFGMSRDIY 173 (280)
T ss_pred --CCEEECCCCceeEcC
Confidence 889999999987653
|
Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory |
| >cd07866 STKc_BUR1 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins | Back alignment and domain information |
|---|
Probab=98.94 E-value=1.9e-09 Score=120.04 Aligned_cols=75 Identities=13% Similarity=0.223 Sum_probs=53.5
Q ss_pred ceEEeeccCCCCCCChHHHHhcCCCHHHHHHHHHHHH--HHHHHhcCccccCCCCCCeEEccCCCCceEEEecccccccC
Q 002031 242 TVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 319 (977)
Q Consensus 242 ~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~ 319 (977)
.++||||+++. +..........++...+...+.+++ +..+|..|++|+|++|+||+++++ +.++|+|||++..+.
T Consensus 90 ~~lv~~~~~~~-l~~~~~~~~~~~~~~~~~~i~~~l~~al~~lH~~~i~H~dl~p~nil~~~~--~~~~l~dfg~~~~~~ 166 (311)
T cd07866 90 VYMVTPYMDHD-LSGLLENPSVKLTESQIKCYMLQLLEGINYLHENHILHRDIKAANILIDNQ--GILKIADFGLARPYD 166 (311)
T ss_pred EEEEEecCCcC-HHHHHhccccCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECCC--CCEEECcCccchhcc
Confidence 47999999863 3222111112345555555544444 778999999999999999999865 899999999987654
|
Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic |
| >cd08528 STKc_Nek10 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 10 | Back alignment and domain information |
|---|
Probab=98.94 E-value=3.5e-09 Score=115.50 Aligned_cols=81 Identities=14% Similarity=0.323 Sum_probs=60.1
Q ss_pred cCCceEEeeccCCCCCCChHHH-H--hcCCCHHHHHHHHHHHH--HHHHHh-cCccccCCCCCCeEEccCCCCceEEEec
Q 002031 239 SSETVLILEFMDGIRLNDCESL-E--AFGVNKQKVVEEITRAY--AHQIYV-DGFFNGDPHPGNFLVSKDPPHRPILLDF 312 (977)
Q Consensus 239 ~~~~vLVmE~i~G~~L~~~~~~-~--~~~~~~~~l~~~l~~~~--l~~i~~-~G~~H~D~hPgNIlv~~~~~g~i~LiDF 312 (977)
....+|+|||++|.+|.++... . ...++...+...+.+++ +..+|. .|++|+|++|.||+++.+ +.++|+||
T Consensus 81 ~~~~~lv~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~i~H~dl~~~nil~~~~--~~~~l~df 158 (269)
T cd08528 81 NDRLYIVMDLIEGAPLGEHFNSLKEKKQRFTEERIWNIFVQMVLALRYLHKEKRIVHRDLTPNNIMLGED--DKVTITDF 158 (269)
T ss_pred CCeEEEEEecCCCCcHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHhccCCceeecCCCHHHEEECCC--CcEEEecc
Confidence 4667899999999999876431 1 12344455555544444 677884 789999999999999865 89999999
Q ss_pred ccccccCHH
Q 002031 313 GLTKKLSSS 321 (977)
Q Consensus 313 G~~~~l~~~ 321 (977)
|++......
T Consensus 159 g~~~~~~~~ 167 (269)
T cd08528 159 GLAKQKQPE 167 (269)
T ss_pred cceeecccc
Confidence 999876543
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 10 (Nek10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek10 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. No function has yet been ascribed to Nek10. The gene encoding Nek10 is a putative causative gene for breast cancer; it is located within a breast cancer susceptibility loci on chromosome 3p24. |
| >PTZ00266 NIMA-related protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=98.93 E-value=3.7e-09 Score=131.48 Aligned_cols=143 Identities=14% Similarity=0.082 Sum_probs=91.0
Q ss_pred cccccccccEEEEEEec-CCCEEEEEEecCCh-hhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCcHHH
Q 002031 124 TPLATASIAQVHRATLV-DGRQVVVKVQHQGI-KTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSE 201 (977)
Q Consensus 124 ~piasaSigqV~~A~l~-~G~~VAVKv~~p~i-~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~E 201 (977)
+.||.|+||.||+|+.+ +++.||+|+..... .... .-.|..|
T Consensus 19 ~kLG~GgFGtVYLAkdk~tg~~vAlKvIk~~~l~e~~------------------------------------~~~~~~E 62 (1021)
T PTZ00266 19 KKIGNGRFGEVFLVKHKRTQEFFCWKAISYRGLKERE------------------------------------KSQLVIE 62 (1021)
T ss_pred EEEecCCCeEEEEEEECCCCeEEEEEEEeccccCHHH------------------------------------HHHHHHH
Confidence 67999999999999974 68889999875321 1100 0013345
Q ss_pred HHHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeee---cCCceEEeeccCCCCCCChHHHH---hcCCCHHHHHHHHH
Q 002031 202 AENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ---SSETVLILEFMDGIRLNDCESLE---AFGVNKQKVVEEIT 275 (977)
Q Consensus 202 a~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~---~~~~vLVmE~i~G~~L~~~~~~~---~~~~~~~~l~~~l~ 275 (977)
+..+..+.+ ...+.+-..+. ....+|||||++|.+|.++.... ...++...+...+.
T Consensus 63 I~IL~~L~H-----------------PNIVrl~d~f~de~~~~lyIVMEY~~gGSL~~lL~k~~~~~g~L~E~~Il~Ia~ 125 (1021)
T PTZ00266 63 VNVMRELKH-----------------KNIVRYIDRFLNKANQKLYILMEFCDAGDLSRNIQKCYKMFGKIEEHAIVDITR 125 (1021)
T ss_pred HHHHHHcCC-----------------CCcCeEEEEEEecCCCEEEEEEeCCCCCcHHHHHHHHhhccCCCCHHHHHHHHH
Confidence 555544432 11122223222 12357999999999998764321 12355555555555
Q ss_pred HHH--HHHHHhc-------CccccCCCCCCeEEccC---------------CCCceEEEecccccccC
Q 002031 276 RAY--AHQIYVD-------GFFNGDPHPGNFLVSKD---------------PPHRPILLDFGLTKKLS 319 (977)
Q Consensus 276 ~~~--l~~i~~~-------G~~H~D~hPgNIlv~~~---------------~~g~i~LiDFG~~~~l~ 319 (977)
+++ +..+|.. +|+|+||||.||||+.+ ..+.++|+|||++..+.
T Consensus 126 QIL~ALaYLHs~g~~~~~k~IVHRDLKPeNILL~s~~~~lg~i~~~~~n~ng~~iVKLsDFGlAr~l~ 193 (1021)
T PTZ00266 126 QLLHALAYCHNLKDGPNGERVLHRDLKPQNIFLSTGIRHIGKITAQANNLNGRPIAKIGDFGLSKNIG 193 (1021)
T ss_pred HHHHHHHHHHhcccccccCCceeccCcHHHeEeecCccccccccccccccCCCCceEEccCCcccccc
Confidence 544 6778874 59999999999999642 12458999999987653
|
|
| >cd05118 STKc_CMGC Catalytic domain of CMGC family Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=98.93 E-value=2.8e-09 Score=116.90 Aligned_cols=144 Identities=17% Similarity=0.210 Sum_probs=90.5
Q ss_pred cccccccccEEEEEEec-CCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCcHHHH
Q 002031 124 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (977)
Q Consensus 124 ~piasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea 202 (977)
+.|++|++|.||+|+.. +|+.|++|..+......-. .-++.+|.
T Consensus 5 ~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~-----------------------------------~~~~~~e~ 49 (283)
T cd05118 5 GKIGEGTYGVVYKARDKLTGEIVAIKKIKLRFESEGI-----------------------------------PKTALREI 49 (283)
T ss_pred eeeecCCCceEEEEEcCCCCcEEEEEEeccccccchh-----------------------------------HHHHHHHH
Confidence 46899999999999974 7999999987654321100 00122233
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeee-cCCceEEeeccCCCCCCChHHHHhcCCCHHHHHHHHHHHH--H
Q 002031 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--A 279 (977)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~--l 279 (977)
..+.++.+ ..-+.+...+. ....++||||+++ ++.+........++...+...+.+++ +
T Consensus 50 ~~l~~l~~-----------------~~i~~~~~~~~~~~~~~~v~e~~~~-~l~~~l~~~~~~~~~~~~~~~~~~i~~~l 111 (283)
T cd05118 50 KLLKELNH-----------------PNIIKLLDVFRHKGDLYLVFEFMDT-DLYKLIKDRQRGLPESLIKSYLYQLLQGL 111 (283)
T ss_pred HHHHHhcC-----------------CCcchHHHhhccCCCEEEEEeccCC-CHHHHHHhhcccCCHHHHHHHHHHHHHHH
Confidence 33333321 00111111121 3556899999987 55554322222445444444444433 6
Q ss_pred HHHHhcCccccCCCCCCeEEccCCCCceEEEecccccccCHHH
Q 002031 280 HQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSSSM 322 (977)
Q Consensus 280 ~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~~~ 322 (977)
..+|..|++|+|+||.||+++.+ +.++|+|||.+..+....
T Consensus 112 ~~LH~~~i~H~dl~p~nili~~~--~~~~l~df~~~~~~~~~~ 152 (283)
T cd05118 112 AFCHSHGILHRDLKPENLLINTE--GVLKLADFGLARSFGSPV 152 (283)
T ss_pred HHHHHCCeeecCcCHHHEEECCC--CcEEEeeeeeeEecCCCc
Confidence 78999999999999999999865 889999999988776543
|
Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They |
| >cd05576 STKc_RPK118_like Catalytic domain of the Protein Serine/Threonine Kinases, RPK118 and similar proteins | Back alignment and domain information |
|---|
Probab=98.93 E-value=3.4e-09 Score=113.80 Aligned_cols=77 Identities=17% Similarity=0.205 Sum_probs=58.9
Q ss_pred CCceEEeeccCCCCCCChHHHHhcCCCHHHHHHHHHHHH--HHHHHhcCccccCCCCCCeEEccCCCCceEEEecccccc
Q 002031 240 SETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKK 317 (977)
Q Consensus 240 ~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~ 317 (977)
...+|+|||++|.+|.+... ....++...+...+.+++ +..+|..|++|+|+||.||+++.+ +.++++|||....
T Consensus 58 ~~~~lv~e~~~~~~L~~~l~-~~~~l~~~~~~~~~~ql~~~l~~lH~~~i~H~dlkp~Nil~~~~--~~~~l~df~~~~~ 134 (237)
T cd05576 58 DSVFLVLQHAEGGKLWSHIS-KFLNIPEECVKRWAAEMVVALDALHREGIVCRDLNPNNILLDDR--GHIQLTYFSRWSE 134 (237)
T ss_pred CeEEEEEecCCCCCHHHHHH-HhcCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHEEEcCC--CCEEEecccchhc
Confidence 45689999999999977643 223455555555554444 778899999999999999999865 8899999998765
Q ss_pred cC
Q 002031 318 LS 319 (977)
Q Consensus 318 l~ 319 (977)
+.
T Consensus 135 ~~ 136 (237)
T cd05576 135 VE 136 (237)
T ss_pred cc
Confidence 53
|
Serine/Threonine Kinases (STKs), RPK118-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RPK118-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily show similarity to human RPK118, which contains an N-terminal Phox homology (PX) domain, a Microtubule Interacting and Trafficking (MIT) domain, and a kinase domain containing a long insert. Also included in the family is human RPK60 (or ribosomal protein S6 kinase-like 1), which also contains MIT and kinase domains but lacks a PX domain. RPK118 binds sphingosine kinase, a key enzyme in the synthesis of sphingosine 1-phospha |
| >cd07849 STKc_ERK1_2_like Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=98.92 E-value=2.6e-09 Score=121.03 Aligned_cols=74 Identities=16% Similarity=0.297 Sum_probs=54.4
Q ss_pred CceEEeeccCCCCCCChHHHHhcCCCHHHHHHHHHHHH--HHHHHhcCccccCCCCCCeEEccCCCCceEEEeccccccc
Q 002031 241 ETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKL 318 (977)
Q Consensus 241 ~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l 318 (977)
..++||||+++ ++.+. +....++...+...+.+++ +..+|..|++|+|+||.||+++.+ +.++|+|||++...
T Consensus 82 ~~~lv~e~~~~-~l~~~--~~~~~l~~~~~~~i~~ql~~aL~~LH~~~ivH~dlkp~Nill~~~--~~~kl~dfg~~~~~ 156 (336)
T cd07849 82 DVYIVQELMET-DLYKL--IKTQHLSNDHIQYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTN--CDLKICDFGLARIA 156 (336)
T ss_pred eEEEEehhccc-CHHHH--HhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHEEECCC--CCEEECcccceeec
Confidence 45899999986 33332 2233445555544444443 788999999999999999999865 89999999998765
Q ss_pred C
Q 002031 319 S 319 (977)
Q Consensus 319 ~ 319 (977)
.
T Consensus 157 ~ 157 (336)
T cd07849 157 D 157 (336)
T ss_pred c
Confidence 4
|
Serine/Threonine Kinases (STKs), Extracellular signal-regulated kinases 1 and 2 (ERK1/2) and Fus3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase |
| >cd05074 PTKc_Tyro3 Catalytic domain of the Protein Tyrosine Kinase, Tyro3 | Back alignment and domain information |
|---|
Probab=98.92 E-value=4.6e-09 Score=114.79 Aligned_cols=75 Identities=21% Similarity=0.301 Sum_probs=54.8
Q ss_pred eEEeeccCCCCCCChHHHHhc-----CCCHHHHHHHHHHHH--HHHHHhcCccccCCCCCCeEEccCCCCceEEEecccc
Q 002031 243 VLILEFMDGIRLNDCESLEAF-----GVNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLT 315 (977)
Q Consensus 243 vLVmE~i~G~~L~~~~~~~~~-----~~~~~~l~~~l~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~ 315 (977)
++++||.++.+|.+....... ..+...+...+.++. +..+|..|++|+|+||.||+++.+ +.++|+|||.+
T Consensus 83 ~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~i~H~dikp~nili~~~--~~~kl~dfg~~ 160 (273)
T cd05074 83 MVILPFMKHGDLHTFLLMSRIGEEPFTLPLQTLVRFMIDIASGMEYLSSKNFIHRDLAARNCMLNEN--MTVCVADFGLS 160 (273)
T ss_pred EEEEecCCCCcHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCEeecccchhhEEEcCC--CCEEECccccc
Confidence 688999999888765432211 133444444444433 678899999999999999999855 88999999998
Q ss_pred cccC
Q 002031 316 KKLS 319 (977)
Q Consensus 316 ~~l~ 319 (977)
..+.
T Consensus 161 ~~~~ 164 (273)
T cd05074 161 KKIY 164 (273)
T ss_pred cccc
Confidence 8663
|
Protein Tyrosine Kinase (PTK) family; Tyro3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyro3 (or Sky) is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Tyro3 is predominantly expressed in the central nervous system and the brain, and functions as a neurotrophic fac |
| >cd05044 PTKc_c-ros Catalytic domain of the Protein Tyrosine Kinase, C-ros | Back alignment and domain information |
|---|
Probab=98.92 E-value=2.9e-09 Score=116.11 Aligned_cols=81 Identities=19% Similarity=0.177 Sum_probs=58.2
Q ss_pred cCCceEEeeccCCCCCCChHHHHh------cCCCHHHHHHHHHHHH--HHHHHhcCccccCCCCCCeEEccCC---CCce
Q 002031 239 SSETVLILEFMDGIRLNDCESLEA------FGVNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDP---PHRP 307 (977)
Q Consensus 239 ~~~~vLVmE~i~G~~L~~~~~~~~------~~~~~~~l~~~l~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~---~g~i 307 (977)
....++||||++|.+|.+...... ...+...+...+.++. +..+|..|++|+|+||.||+++.+. ...+
T Consensus 71 ~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~H~dl~p~nil~~~~~~~~~~~~ 150 (269)
T cd05044 71 NEPQYIIMELMEGGDLLSYLRDARVERFGPPLLTLKELLDICLDVAKGCVYLEQMHFIHRDLAARNCLVSEKGYDADRVV 150 (269)
T ss_pred CCCeEEEEeccCCCcHHHHHHHhhhcccCCccccHHHHHHHHHHHHHHHHHHHhCCcccCCCChheEEEecCCCCCCcce
Confidence 455789999999999987643211 1133344444444443 6788999999999999999998651 1279
Q ss_pred EEEecccccccC
Q 002031 308 ILLDFGLTKKLS 319 (977)
Q Consensus 308 ~LiDFG~~~~l~ 319 (977)
+|+|||++..+.
T Consensus 151 ~l~dfg~~~~~~ 162 (269)
T cd05044 151 KIGDFGLARDIY 162 (269)
T ss_pred EECCcccccccc
Confidence 999999987664
|
Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male |
| >cd08530 STKc_CNK2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains | Back alignment and domain information |
|---|
Probab=98.91 E-value=4.1e-09 Score=113.74 Aligned_cols=80 Identities=14% Similarity=0.175 Sum_probs=60.0
Q ss_pred cCCceEEeeccCCCCCCChHHHH---hcCCCHHHHHHHHHHHH--HHHHHhcCccccCCCCCCeEEccCCCCceEEEecc
Q 002031 239 SSETVLILEFMDGIRLNDCESLE---AFGVNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFG 313 (977)
Q Consensus 239 ~~~~vLVmE~i~G~~L~~~~~~~---~~~~~~~~l~~~l~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG 313 (977)
....++||||++|.+|.+..... ....+...+...+.+++ +..+|..|++|+|++|.||+++.+ ++++|+|||
T Consensus 71 ~~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lh~~~i~h~~l~~~ni~~~~~--~~~kl~d~g 148 (256)
T cd08530 71 GNKLCIVMEYAPFGDLSKAISKRKKKRKLIPEQEIWRIFIQLLRGLQALHEQKILHRDLKSANILLVAN--DLVKIGDLG 148 (256)
T ss_pred CCEEEEEehhcCCCCHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCcceEEEecC--CcEEEeecc
Confidence 35568999999999988764321 12345555555444433 678899999999999999999965 889999999
Q ss_pred cccccCH
Q 002031 314 LTKKLSS 320 (977)
Q Consensus 314 ~~~~l~~ 320 (977)
++..+..
T Consensus 149 ~~~~~~~ 155 (256)
T cd08530 149 ISKVLKK 155 (256)
T ss_pred chhhhcc
Confidence 9876644
|
Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, an |
| >cd08218 STKc_Nek1 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 1 | Back alignment and domain information |
|---|
Probab=98.91 E-value=6.1e-09 Score=112.66 Aligned_cols=142 Identities=15% Similarity=0.184 Sum_probs=92.1
Q ss_pred cccccccccEEEEEEe-cCCCEEEEEEecCC-hhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCcHHH
Q 002031 124 TPLATASIAQVHRATL-VDGRQVVVKVQHQG-IKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSE 201 (977)
Q Consensus 124 ~piasaSigqV~~A~l-~~G~~VAVKv~~p~-i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~E 201 (977)
+.+|+|++|.||+++. .+|+.||||..... ...... -++.+|
T Consensus 6 ~~lg~g~~g~~~~~~~~~~~~~~~ik~~~~~~~~~~~~------------------------------------~~~~~e 49 (256)
T cd08218 6 KKIGEGSFGKAILVKSKEDGKQYVIKEINISKMSPKER------------------------------------EESRKE 49 (256)
T ss_pred EEeccCCceEEEEEEEcCCCCEEEEEEEEhHhCChHHH------------------------------------HHHHHH
Confidence 5799999999999997 47899999975421 100000 012334
Q ss_pred HHHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeee-cCCceEEeeccCCCCCCChHHHHh-cCCCHHHHHHHHHHHH-
Q 002031 202 AENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLEA-FGVNKQKVVEEITRAY- 278 (977)
Q Consensus 202 a~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLVmE~i~G~~L~~~~~~~~-~~~~~~~l~~~l~~~~- 278 (977)
...+.++.+ ..-+.+...+. ....+|||||++|.+|.+...... ...+...+...+.++.
T Consensus 50 ~~~l~~l~~-----------------~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~ 112 (256)
T cd08218 50 VAVLSNMKH-----------------PNIVQYQESFEENGNLYIVMDYCEGGDLYKKINAQRGVLFPEDQILDWFVQICL 112 (256)
T ss_pred HHHHHhCCC-----------------CCeeeeEeeecCCCeEEEEEecCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHH
Confidence 333333321 00112222222 456789999999999876643221 1344455555444444
Q ss_pred -HHHHHhcCccccCCCCCCeEEccCCCCceEEEecccccccCH
Q 002031 279 -AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 320 (977)
Q Consensus 279 -l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 320 (977)
+..+|..|++|+|++|.||+++.+ +.++|+|||++..+..
T Consensus 113 ~l~~lh~~~i~h~~l~~~nil~~~~--~~~~l~d~~~~~~~~~ 153 (256)
T cd08218 113 ALKHVHDRKILHRDIKSQNIFLTKD--GTIKLGDFGIARVLNS 153 (256)
T ss_pred HHHHHHhCCEecCCCCHHHEEEcCC--CCEEEeeccceeecCc
Confidence 678899999999999999999865 7899999999987754
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 1 (Nek1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek1 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek1 is associated with centrosomes throughout the cell cycle. It is involved in the formation of primary cilium and in the maintenance of centrosomes. It cycles through the nucleus and may be capable of relaying signals between the cilium and the nucleus. Nek1 is implicated in the development of polycysti |
| >cd07842 STKc_CDK8_like Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=98.91 E-value=3.6e-09 Score=118.25 Aligned_cols=145 Identities=17% Similarity=0.183 Sum_probs=88.1
Q ss_pred cccccccccEEEEEEec---CCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCcHH
Q 002031 124 TPLATASIAQVHRATLV---DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNS 200 (977)
Q Consensus 124 ~piasaSigqV~~A~l~---~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~ 200 (977)
+.||+|++|.||+|+.+ +|+.||||+.++..... ..+.. .+.+
T Consensus 6 ~~ig~g~~g~v~~~~~~~~~~~~~~alK~~~~~~~~~------------------------~~~~~----------~~~~ 51 (316)
T cd07842 6 GCIGRGTYGRVYKAKRKNGKDGKEYAIKKFKGDKEQY------------------------TGISQ----------SACR 51 (316)
T ss_pred EEeccCCcEEEEEEEecCCCCCCeEEEEEeccccccc------------------------cCccH----------HHHH
Confidence 45999999999999974 58999999887643100 00000 1223
Q ss_pred HHHHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeee-c--CCceEEeeccCCCCCCChHHH-Hh---cCCCHHHHHHH
Q 002031 201 EAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-S--SETVLILEFMDGIRLNDCESL-EA---FGVNKQKVVEE 273 (977)
Q Consensus 201 Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~--~~~vLVmE~i~G~~L~~~~~~-~~---~~~~~~~l~~~ 273 (977)
|+.-+.++.+ ...+.+...+. . ...+|||||+++. +.+.... .. ..+....+...
T Consensus 52 e~~~l~~l~h-----------------~~i~~~~~~~~~~~~~~~~lv~e~~~~~-l~~~~~~~~~~~~~~~~~~~~~~i 113 (316)
T cd07842 52 EIALLRELKH-----------------ENVVSLVEVFLEHADKSVYLLFDYAEHD-LWQIIKFHRQAKRVSIPPSMVKSL 113 (316)
T ss_pred HHHHHHhcCC-----------------CCccceEEEEeCCCCceEEEEEeCCCcC-HHHHHHhhccCCCcCcCHHHHHHH
Confidence 4443333321 11122333332 2 4468999999863 3332211 11 12334444444
Q ss_pred HHHHH--HHHHHhcCccccCCCCCCeEEccC--CCCceEEEecccccccCH
Q 002031 274 ITRAY--AHQIYVDGFFNGDPHPGNFLVSKD--PPHRPILLDFGLTKKLSS 320 (977)
Q Consensus 274 l~~~~--l~~i~~~G~~H~D~hPgNIlv~~~--~~g~i~LiDFG~~~~l~~ 320 (977)
+.+++ +..+|..|++|+|++|.||+++.+ .++.++|+|||++..+..
T Consensus 114 ~~qi~~~l~~lH~~~i~h~dlkp~Nil~~~~~~~~~~~kl~Dfg~~~~~~~ 164 (316)
T cd07842 114 LWQILNGVHYLHSNWVLHRDLKPANILVMGEGPERGVVKIGDLGLARLFNA 164 (316)
T ss_pred HHHHHHHHHHHHhCCEeeCCCCHHHEEEcCCCCccceEEECCCccccccCC
Confidence 44433 778899999999999999999861 138899999999886643
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the |
| >cd07829 STKc_CDK_like Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=98.90 E-value=6.4e-09 Score=114.02 Aligned_cols=78 Identities=18% Similarity=0.243 Sum_probs=58.1
Q ss_pred CCceEEeeccCCCCCCChHHHHhcCCCHHHHHHHHHHHH--HHHHHhcCccccCCCCCCeEEccCCCCceEEEecccccc
Q 002031 240 SETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKK 317 (977)
Q Consensus 240 ~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~ 317 (977)
...++||||+++ +|.++........+...+...+.+++ +..+|..|++|+|++|.||+++.+ +.++|+|||.+..
T Consensus 71 ~~~~~v~e~~~~-~l~~~i~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~~l~~~ni~~~~~--~~~~l~d~g~~~~ 147 (282)
T cd07829 71 RKLYLVFEYCDM-DLKKYLDKRPGPLSPNLIKSIMYQLLRGLAYCHSHRILHRDLKPQNILINRD--GVLKLADFGLARA 147 (282)
T ss_pred CceEEEecCcCc-CHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCChheEEEcCC--CCEEEecCCcccc
Confidence 456899999986 67665432212455555555444443 788999999999999999999865 8999999999877
Q ss_pred cCH
Q 002031 318 LSS 320 (977)
Q Consensus 318 l~~ 320 (977)
+..
T Consensus 148 ~~~ 150 (282)
T cd07829 148 FGI 150 (282)
T ss_pred cCC
Confidence 643
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the |
| >cd07856 STKc_Sty1_Hog1 Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1 | Back alignment and domain information |
|---|
Probab=98.90 E-value=5.4e-09 Score=118.14 Aligned_cols=140 Identities=16% Similarity=0.195 Sum_probs=88.6
Q ss_pred ccccccccccEEEEEEec-CCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCcHHH
Q 002031 123 ETPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSE 201 (977)
Q Consensus 123 ~~piasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~E 201 (977)
.+.||.|++|.||+|+.+ +|+.||||+......... ..-++..|
T Consensus 15 ~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~-----------------------------------~~~~~~~E 59 (328)
T cd07856 15 LQPVGMGAFGLVCSARDQLTGQNVAIKKIMKPFSTPV-----------------------------------LAKRTYRE 59 (328)
T ss_pred EEeecccCCeEEEEEEECCCCCEEEEEEecccccccc-----------------------------------hhHHHHHH
Confidence 378999999999999864 899999997643211000 00123334
Q ss_pred HHHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeee--cCCceEEeeccCCCCCCChHHHHhcCCCHHHHHHHHHHHH-
Q 002031 202 AENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ--SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY- 278 (977)
Q Consensus 202 a~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~--~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~- 278 (977)
...+.++.+ ...+.+...+. ....+++|||+.+ +|.++. .........+...+.+++
T Consensus 60 ~~~l~~l~h-----------------pniv~~~~~~~~~~~~~~lv~e~~~~-~L~~~~--~~~~~~~~~~~~~~~ql~~ 119 (328)
T cd07856 60 LKLLKHLRH-----------------ENIISLSDIFISPLEDIYFVTELLGT-DLHRLL--TSRPLEKQFIQYFLYQILR 119 (328)
T ss_pred HHHHHhcCC-----------------CCeeeEeeeEecCCCcEEEEeehhcc-CHHHHH--hcCCCCHHHHHHHHHHHHH
Confidence 444444322 11233344433 3456899999954 555442 222334333333333332
Q ss_pred -HHHHHhcCccccCCCCCCeEEccCCCCceEEEecccccccC
Q 002031 279 -AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 319 (977)
Q Consensus 279 -l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~ 319 (977)
+..+|..|++|+|++|.||+++.+ +.++|+|||++....
T Consensus 120 aL~~LH~~~iiH~dl~p~Nili~~~--~~~~l~dfg~~~~~~ 159 (328)
T cd07856 120 GLKYVHSAGVVHRDLKPSNILINEN--CDLKICDFGLARIQD 159 (328)
T ss_pred HHHHHHhCCcccCCCCHHHEeECCC--CCEEeCccccccccC
Confidence 678999999999999999999855 889999999987654
|
Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and U |
| >PHA02882 putative serine/threonine kinase; Provisional | Back alignment and domain information |
|---|
Probab=98.90 E-value=7e-09 Score=115.27 Aligned_cols=74 Identities=19% Similarity=0.301 Sum_probs=49.2
Q ss_pred ceEEeeccCCCCCCChHHHHhcCCCHHHHHHHHHHHH--HHHHHhcCccccCCCCCCeEEccCCCCceEEEecccccccC
Q 002031 242 TVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 319 (977)
Q Consensus 242 ~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~ 319 (977)
.+++||++.. ++.+.... ........+...+.++. +..+|..|++|||+||.|||++.+ +.++|+|||+++.+.
T Consensus 102 ~~~~~~~~~~-~~~~~~~~-~~~~~~~~~~~i~~qi~~~l~~lH~~~iiHrDiKp~Nill~~~--~~~~l~DFGla~~~~ 177 (294)
T PHA02882 102 RFILLEKLVE-NTKEIFKR-IKCKNKKLIKNIMKDMLTTLEYIHEHGISHGDIKPENIMVDGN--NRGYIIDYGIASHFI 177 (294)
T ss_pred EEEEEehhcc-CHHHHHHh-hccCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCC--CcEEEEEcCCceeec
Confidence 3678887643 33222111 11123333333333333 778999999999999999999855 889999999998764
|
|
| >cd07854 STKc_MAPK4_6 Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 and 6 | Back alignment and domain information |
|---|
Probab=98.89 E-value=3.6e-09 Score=120.23 Aligned_cols=74 Identities=18% Similarity=0.283 Sum_probs=53.0
Q ss_pred ceEEeeccCCCCCCChHHHHhcCCCHHHHHHHHHHHH--HHHHHhcCccccCCCCCCeEEccCCCCceEEEecccccccC
Q 002031 242 TVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 319 (977)
Q Consensus 242 ~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~ 319 (977)
.++||||+++ +|.+. +....+....+...+.+++ +..+|..|++|+|+||+||+++.+ ++.++|+|||++..+.
T Consensus 91 ~~lv~e~~~~-~L~~~--~~~~~l~~~~~~~~~~qi~~aL~~LH~~givH~dikp~Nili~~~-~~~~kl~dfg~~~~~~ 166 (342)
T cd07854 91 VYIVQEYMET-DLANV--LEQGPLSEEHARLFMYQLLRGLKYIHSANVLHRDLKPANVFINTE-DLVLKIGDFGLARIVD 166 (342)
T ss_pred EEEEeecccc-cHHHH--HHcCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEEcCC-CceEEECCcccceecC
Confidence 4799999985 55443 2222344444444444433 778899999999999999999754 3678999999987664
|
Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 4 (MAPK4) and MAPK6 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK4/6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. MAPK4 is also called ERK4 or p63MAPK, while MAPK6 is also called ERK3 or p97MAPK. MAPK4 and MAPK6 are atypical MAPKs that are not regulated by MAP2Ks. MAPK6 is expressed ubiquitously with highest amounts in brain and skeletal muscle. It may be involved in the control of cell differentiation by negatively regulating cell cycle progressi |
| >KOG3653 consensus Transforming growth factor beta/activin receptor subfamily of serine/threonine kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=98.89 E-value=4e-09 Score=117.47 Aligned_cols=141 Identities=22% Similarity=0.200 Sum_probs=94.0
Q ss_pred cccccccccEEEEEEecCCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCcHHHHH
Q 002031 124 TPLATASIAQVHRATLVDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEAE 203 (977)
Q Consensus 124 ~piasaSigqV~~A~l~~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea~ 203 (977)
+-+|+|.||.||+|.+ +++.|||||..+.-.+.+.++-++.+. | ..+-.
T Consensus 216 eli~~Grfg~V~KaqL-~~~~VAVKifp~~~kqs~~~Ek~Iy~l---------p---------------------~m~h~ 264 (534)
T KOG3653|consen 216 ELIGRGRFGCVWKAQL-DNRLVAVKIFPEQEKQSFQNEKNIYSL---------P---------------------GMKHE 264 (534)
T ss_pred HHhhcCccceeehhhc-cCceeEEEecCHHHHHHHHhHHHHHhc---------c---------------------Cccch
Confidence 4589999999999998 569999999876655555444332211 1 11223
Q ss_pred HHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeeecCCceEEeeccCCCCCCChHHHHhcCCCHH---HHHHHHHHHHHH
Q 002031 204 NTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQSSETVLILEFMDGIRLNDCESLEAFGVNKQ---KVVEEITRAYAH 280 (977)
Q Consensus 204 n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~---~l~~~l~~~~l~ 280 (977)
|+.+|-..=+. .+.. ..+.+||+||-+-++|.++. ...-++-. ++++.+++- +.
T Consensus 265 nIl~Fi~~ekr------------------~t~~--~~eywLVt~fh~kGsL~dyL--~~ntisw~~~cria~SmarG-La 321 (534)
T KOG3653|consen 265 NILQFIGAEKR------------------GTAD--RMEYWLVTEFHPKGSLCDYL--KANTISWNSLCRIAESMARG-LA 321 (534)
T ss_pred hHHHhhchhcc------------------CCcc--ccceeEEeeeccCCcHHHHH--HhccccHHHHHHHHHHHHHH-HH
Confidence 55555321110 0000 12457999999999999884 44445543 344444443 44
Q ss_pred HHHh---------cCccccCCCCCCeEEccCCCCceEEEecccccccCH
Q 002031 281 QIYV---------DGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 320 (977)
Q Consensus 281 ~i~~---------~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 320 (977)
.+|+ -+|.|||+|..||||..| ++-+|.|||++.++++
T Consensus 322 ~LHee~p~~d~~Kp~IaHRDlkSkNVLvK~D--lTccIaDFGLAl~~~p 368 (534)
T KOG3653|consen 322 HLHEELPRGDHHKPPIAHRDLKSKNVLVKND--LTCCIADFGLALRLEP 368 (534)
T ss_pred HhcccCCcCCCCCCccccccccccceEEccC--CcEEeeccceeEEecC
Confidence 5664 579999999999999866 9999999999998874
|
|
| >KOG0669 consensus Cyclin T-dependent kinase CDK9 [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=98.89 E-value=3.1e-10 Score=116.59 Aligned_cols=74 Identities=22% Similarity=0.324 Sum_probs=51.7
Q ss_pred CceEEeeccCCCCCCChHHHH---hcCCCHHHHHHHHHHHH--HHHHHhcCccccCCCCCCeEEccCCCCceEEEecccc
Q 002031 241 ETVLILEFMDGIRLNDCESLE---AFGVNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLT 315 (977)
Q Consensus 241 ~~vLVmE~i~G~~L~~~~~~~---~~~~~~~~l~~~l~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~ 315 (977)
.-+|||.+|+ .|+..+- ...+....|-..+-.+. +..||+..++|||+||.|+||+.+ |.++|.|||++
T Consensus 98 t~ylVf~~ce----hDLaGlLsn~~vr~sls~Ikk~Mk~Lm~GL~~iHr~kilHRDmKaaNvLIt~d--gilklADFGla 171 (376)
T KOG0669|consen 98 TFYLVFDFCE----HDLAGLLSNRKVRFSLSEIKKVMKGLMNGLYYIHRNKILHRDMKAANVLITKD--GILKLADFGLA 171 (376)
T ss_pred eeeeeHHHhh----hhHHHHhcCccccccHHHHHHHHHHHHHHHHHHHHhhHHhhcccHhhEEEcCC--ceEEeeccccc
Confidence 3579999997 3332221 11233333333222222 778999999999999999999966 89999999999
Q ss_pred cccCH
Q 002031 316 KKLSS 320 (977)
Q Consensus 316 ~~l~~ 320 (977)
+.++.
T Consensus 172 r~fs~ 176 (376)
T KOG0669|consen 172 RAFST 176 (376)
T ss_pred cceec
Confidence 87764
|
|
| >PHA03210 serine/threonine kinase US3; Provisional | Back alignment and domain information |
|---|
Probab=98.88 E-value=2.4e-09 Score=128.04 Aligned_cols=79 Identities=19% Similarity=0.147 Sum_probs=51.9
Q ss_pred cCCceEEeeccCCCCCCChHHHHhc----CCCHHHHHHHHHHHH--HHHHHhcCccccCCCCCCeEEccCCCCceEEEec
Q 002031 239 SSETVLILEFMDGIRLNDCESLEAF----GVNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDF 312 (977)
Q Consensus 239 ~~~~vLVmE~i~G~~L~~~~~~~~~----~~~~~~l~~~l~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDF 312 (977)
....++|||++.+. +.+....... ......+...+.+++ +..+|..||+|||+||.|||++.+ +.++|+||
T Consensus 235 ~~~~~lv~e~~~~~-l~~~l~~~~~~~~~~~~~~~~~~i~~ql~~aL~yLH~~gIiHrDLKP~NILl~~~--~~vkL~DF 311 (501)
T PHA03210 235 EANTYMITQKYDFD-LYSFMYDEAFDWKDRPLLKQTRAIMKQLLCAVEYIHDKKLIHRDIKLENIFLNCD--GKIVLGDF 311 (501)
T ss_pred CCeeEEEEeccccC-HHHHHhhccccccccccHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECCC--CCEEEEeC
Confidence 45568999998653 3222110000 011222222333332 788999999999999999999865 89999999
Q ss_pred ccccccCH
Q 002031 313 GLTKKLSS 320 (977)
Q Consensus 313 G~~~~l~~ 320 (977)
|++..+..
T Consensus 312 Gla~~~~~ 319 (501)
T PHA03210 312 GTAMPFEK 319 (501)
T ss_pred CCceecCc
Confidence 99987754
|
|
| >cd05043 PTK_Ryk Pseudokinase domain of Ryk (Receptor related to tyrosine kinase) | Back alignment and domain information |
|---|
Probab=98.88 E-value=9.9e-09 Score=112.75 Aligned_cols=138 Identities=14% Similarity=0.128 Sum_probs=92.7
Q ss_pred cccccccccEEEEEEecC-----CCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCc
Q 002031 124 TPLATASIAQVHRATLVD-----GRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDF 198 (977)
Q Consensus 124 ~piasaSigqV~~A~l~~-----G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~ 198 (977)
+-||.|++|.||+|...+ ++.|++|+......... .-.+
T Consensus 12 ~~i~~g~~g~V~~~~~~~~~~~~~~~v~~k~~~~~~~~~~------------------------------------~~~~ 55 (280)
T cd05043 12 DLLQEGTFGRIFYGILIDEKPGKEEEVFVKTVKDHASEIQ------------------------------------VTLL 55 (280)
T ss_pred eeecccCCceEEEEEEecCCCCceeEEEEEEccCCCCHHH------------------------------------HHHH
Confidence 568999999999999865 78899998654322110 0023
Q ss_pred HHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeee-----cCCceEEeeccCCCCCCChHHHHh-------cCCC
Q 002031 199 NSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-----SSETVLILEFMDGIRLNDCESLEA-------FGVN 266 (977)
Q Consensus 199 ~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-----~~~~vLVmE~i~G~~L~~~~~~~~-------~~~~ 266 (977)
.+|+..+.++.+ ..+.+++. ....++++||+++.+|.+...... ..+.
T Consensus 56 ~~e~~~l~~l~h--------------------~ni~~~~~~~~~~~~~~~~~~~~~~~~~L~~~l~~~~~~~~~~~~~l~ 115 (280)
T cd05043 56 LQESCLLYGLSH--------------------QNILPILHVCIEDGEPPFVLYPYMNWGNLKLFLQQCRLGEANNPQALS 115 (280)
T ss_pred HHHHHHHHhCCC--------------------CCCCeEEEEEecCCCCCEEEEEcCCCCcHHHHHHhccccccccccCCC
Confidence 345444444321 11222221 245689999999999887643221 1244
Q ss_pred HHHHHHHHHHHH--HHHHHhcCccccCCCCCCeEEccCCCCceEEEecccccccC
Q 002031 267 KQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 319 (977)
Q Consensus 267 ~~~l~~~l~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~ 319 (977)
...+...+.++. +..+|..|++|+|++|.||+++.+ +.++|+|||+++.+.
T Consensus 116 ~~~~~~i~~~i~~~l~~LH~~~i~H~di~p~nil~~~~--~~~kl~d~g~~~~~~ 168 (280)
T cd05043 116 TQQLVHMAIQIACGMSYLHKRGVIHKDIAARNCVIDEE--LQVKITDNALSRDLF 168 (280)
T ss_pred HHHHHHHHHHHHHHHHHHHHCCEeecccCHhhEEEcCC--CcEEECCCCCccccc
Confidence 555555554444 788999999999999999999865 899999999988664
|
Protein Tyrosine Kinase (PTK) family; Receptor related to tyrosine kinase (Ryk); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ryk is a receptor tyr kinase (RTK) containing an extracellular region with two leucine-rich motifs, a transmembrane segment, and an intracellular inactive pseudokinase domain. The extracellular region of Ryk shows homology to the N-terminal domain of Wnt inhibitory factor-1 (WIF) and serves as the ligand (Wnt) binding domain of Ryk. Ryk is expressed in many different tissues both during development and in adults, suggesting a widespread function. It |
| >cd07838 STKc_CDK4_6_like Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=98.87 E-value=1.3e-08 Score=111.94 Aligned_cols=145 Identities=19% Similarity=0.184 Sum_probs=90.3
Q ss_pred cccccccccEEEEEEec-CCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCcHHHH
Q 002031 124 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (977)
Q Consensus 124 ~piasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea 202 (977)
+.||.|++|.||+|+.+ +|+.||||+.+......- ...++.+|.
T Consensus 5 ~~l~~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~-----------------------------------~~~~~~~e~ 49 (287)
T cd07838 5 AEIGEGAYGTVYKARDLNTGRFVALKKVRVPLSEEG-----------------------------------IPLSTLREI 49 (287)
T ss_pred EEecccCceEEEEEEECCCCCEEEEEEeccccccch-----------------------------------hhhhHHHHH
Confidence 46899999999999986 599999998764322100 000122333
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeee-c-----CCceEEeeccCCCCCCChHHHHh-cCCCHHHHHHHHH
Q 002031 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-S-----SETVLILEFMDGIRLNDCESLEA-FGVNKQKVVEEIT 275 (977)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~-----~~~vLVmE~i~G~~L~~~~~~~~-~~~~~~~l~~~l~ 275 (977)
..+.+++.. . ...-+.+-..+. . ...+++|||+++ ++.+...... ..++...+...+.
T Consensus 50 ~~l~~l~~~-~-------------h~~i~~~~~~~~~~~~~~~~~~~l~~e~~~~-~l~~~l~~~~~~~l~~~~~~~~~~ 114 (287)
T cd07838 50 ALLKQLESF-E-------------HPNIVRLLDVCHGPRTDRELKLTLVFEHVDQ-DLATYLSKCPKPGLPPETIKDLMR 114 (287)
T ss_pred HHHHHhhcc-C-------------CCCcceEEEEEeeccCCCCceeEEEehhccc-CHHHHHHHccCCCCCHHHHHHHHH
Confidence 333333210 0 000112222222 1 226899999986 5655432211 2345555555555
Q ss_pred HHH--HHHHHhcCccccCCCCCCeEEccCCCCceEEEecccccccCH
Q 002031 276 RAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 320 (977)
Q Consensus 276 ~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 320 (977)
+++ +..+|..|++|+|++|.||+++.+ +.++|+|||.+..++.
T Consensus 115 ~i~~al~~LH~~~i~h~~l~~~nili~~~--~~~~l~dfg~~~~~~~ 159 (287)
T cd07838 115 QLLRGVDFLHSHRIVHRDLKPQNILVTSD--GQVKIADFGLARIYSF 159 (287)
T ss_pred HHHHHHHHHHHCCeeeccCChhhEEEccC--CCEEEeccCcceeccC
Confidence 544 788999999999999999999965 8999999999877643
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both |
| >cd07855 STKc_ERK5 Catalytic domain of the Serine/Threonine Kinase, Extracellular signal-Regulated Kinase 5 | Back alignment and domain information |
|---|
Probab=98.87 E-value=3e-09 Score=120.48 Aligned_cols=75 Identities=19% Similarity=0.326 Sum_probs=54.3
Q ss_pred CceEEeeccCCCCCCChHHHHhcCCCHHHHHHHHHHHH--HHHHHhcCccccCCCCCCeEEccCCCCceEEEeccccccc
Q 002031 241 ETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKL 318 (977)
Q Consensus 241 ~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l 318 (977)
..++||||+.| +|.+... ....++...+...+.++. +..+|..|++|+|+||.||+++.+ +.++|+|||++..+
T Consensus 82 ~~~lv~e~~~~-~l~~~~~-~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~Nil~~~~--~~~kl~dfg~~~~~ 157 (334)
T cd07855 82 DVYVVMDLMES-DLHHIIH-SDQPLTEEHIRYFLYQLLRGLKYIHSANVIHRDLKPSNLLVNED--CELRIGDFGMARGL 157 (334)
T ss_pred eEEEEEehhhh-hHHHHhc-cCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEcCC--CcEEecccccceee
Confidence 45799999976 5544422 122344444444444433 778899999999999999999865 89999999998765
Q ss_pred C
Q 002031 319 S 319 (977)
Q Consensus 319 ~ 319 (977)
.
T Consensus 158 ~ 158 (334)
T cd07855 158 S 158 (334)
T ss_pred c
Confidence 4
|
Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the |
| >cd07857 STKc_MPK1 Catalytic domain of the Serine/Threonine Kinase, Fungal Mitogen-Activated Protein Kinase MPK1 | Back alignment and domain information |
|---|
Probab=98.87 E-value=6.5e-09 Score=117.60 Aligned_cols=76 Identities=25% Similarity=0.332 Sum_probs=56.2
Q ss_pred CceEEeeccCCCCCCChHHHHhcCCCHHHHHHHHHHHH--HHHHHhcCccccCCCCCCeEEccCCCCceEEEeccccccc
Q 002031 241 ETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKL 318 (977)
Q Consensus 241 ~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l 318 (977)
..+++|||+++ +|.+... ....++...+...+.+++ +..+|..|++|+|+||+|||++.+ +.++|+|||++..+
T Consensus 80 ~~~~~~e~~~~-~L~~~l~-~~~~~~~~~~~~~~~qi~~aL~~LH~~givH~dlkp~Nili~~~--~~~kl~Dfg~a~~~ 155 (332)
T cd07857 80 ELYLYEELMEA-DLHQIIR-SGQPLTDAHFQSFIYQILCGLKYIHSANVLHRDLKPGNLLVNAD--CELKICDFGLARGF 155 (332)
T ss_pred cEEEEEecccC-CHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHeEEcCC--CCEEeCcCCCceec
Confidence 35789999875 5544421 223455555555555544 788999999999999999999865 88999999999876
Q ss_pred CH
Q 002031 319 SS 320 (977)
Q Consensus 319 ~~ 320 (977)
..
T Consensus 156 ~~ 157 (332)
T cd07857 156 SE 157 (332)
T ss_pred cc
Confidence 53
|
Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) MPK1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MPK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs MPK1 from Saccharomyces cerevisiae, Pmk1 from Schizosaccharomyces pombe, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. MPK1 (also called Slt2) and Pmk1 (also called Spm1) are stress-activated MAPKs that regulate the cell wall integrity (CWI) pathway, and are therefore important in the maintainance of cell shape, cell wall co |
| >cd06616 PKc_MKK4 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 4 | Back alignment and domain information |
|---|
Probab=98.87 E-value=1e-08 Score=113.07 Aligned_cols=137 Identities=14% Similarity=0.151 Sum_probs=86.0
Q ss_pred cccccccccEEEEEEec-CCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCcHHHH
Q 002031 124 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (977)
Q Consensus 124 ~piasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea 202 (977)
+.||.|++|.||+++.. +|+.||||..+...... .+.++.+|.
T Consensus 10 ~~lg~G~~g~vy~~~~~~~~~~~aiK~~~~~~~~~------------------------------------~~~~~~~e~ 53 (288)
T cd06616 10 GEIGRGAFGTVNKMLHKPSGTIMAVKRIRSTVDEK------------------------------------EQKRLLMDL 53 (288)
T ss_pred HHhCCCCceEEEEEEECCCCCEEEEEEehhccChH------------------------------------HHHHHHHHH
Confidence 56899999999999974 78999999765322110 011233444
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceee---e-cCCceEEeeccCCCCCCChHHH----HhcCCCHHHHHHHH
Q 002031 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVI---Q-SSETVLILEFMDGIRLNDCESL----EAFGVNKQKVVEEI 274 (977)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~---~-~~~~vLVmE~i~G~~L~~~~~~----~~~~~~~~~l~~~l 274 (977)
..+.++.. + -.|++++ . ....+++|||+++ ++.++... ....+....+...+
T Consensus 54 ~~l~~~~~-----------------~--~~iv~~~~~~~~~~~~~~~~e~~~~-~l~~l~~~~~~~~~~~l~~~~~~~i~ 113 (288)
T cd06616 54 DVVMRSSD-----------------C--PYIVKFYGALFREGDCWICMELMDI-SLDKFYKYVYEVLKSVIPEEILGKIA 113 (288)
T ss_pred HHHHHhcC-----------------C--CCEeeeeeEEecCCcEEEEEecccC-CHHHHHHHHHHhhcCCCCHHHHHHHH
Confidence 44443321 1 1233332 2 4567899999874 44333211 11224444444444
Q ss_pred HHHH--HHHHHh-cCccccCCCCCCeEEccCCCCceEEEeccccccc
Q 002031 275 TRAY--AHQIYV-DGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKL 318 (977)
Q Consensus 275 ~~~~--l~~i~~-~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l 318 (977)
.++. ++.+|. .|++|+|+||.||+++.+ +.++|+|||++..+
T Consensus 114 ~~i~~~l~~lh~~~~i~H~dlkp~Nil~~~~--~~~kl~dfg~~~~~ 158 (288)
T cd06616 114 VATVKALNYLKEELKIIHRDVKPSNILLDRN--GNIKLCDFGISGQL 158 (288)
T ss_pred HHHHHHHHHHhhcCCeeccCCCHHHEEEccC--CcEEEeecchhHHh
Confidence 4433 677776 599999999999999865 88999999998655
|
Protein kinases (PKs), MAP kinase kinase 4 (MKK4) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK4 is a dual-specificity PK that phosphorylates and activates |
| >KOG0586 consensus Serine/threonine protein kinase [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.86 E-value=7.6e-09 Score=119.01 Aligned_cols=141 Identities=18% Similarity=0.253 Sum_probs=96.4
Q ss_pred cccccccccEEEEEEe-cCCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCcHHHH
Q 002031 124 TPLATASIAQVHRATL-VDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (977)
Q Consensus 124 ~piasaSigqV~~A~l-~~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea 202 (977)
.-||+|.||.|..|+. .+|.+||||+.....- |...++. +.+|.
T Consensus 62 ~tig~g~f~~V~La~~~~t~~~VaiK~idkt~l-----n~~~~~k------------------------------~~rev 106 (596)
T KOG0586|consen 62 KTIGKGNFAKVKLARHILTGTEVAIKIIDKTQL-----NPSKRQK------------------------------LGREV 106 (596)
T ss_pred eeeccceeEEEEeeEecCCCceEEEEEehhccc-----ChHHHHH------------------------------HHHHH
Confidence 5799999999999997 4899999998653211 1111111 12233
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeee-cCCceEEeeccCCCCCCChHHHHhcCCCHHHHHHHHHHHH---
Q 002031 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--- 278 (977)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~--- 278 (977)
+-+..+.| ...|.+-.++. ....||||||..|+.+.++ +...+.+.+..++..+.-.
T Consensus 107 ~imk~l~H-----------------PnIvkl~~v~~t~~~lylV~eya~~ge~~~y--l~~~gr~~e~~ar~~F~q~vsa 167 (596)
T KOG0586|consen 107 DIMKSLNH-----------------PNIVKLFSVIETEATLYLVMEYASGGELFDY--LVKHGRMKEKEARAKFRQIVSA 167 (596)
T ss_pred HHHHhcCC-----------------cceeeeeeeeeecceeEEEEEeccCchhHHH--HHhcccchhhhhhhhhHHHHHH
Confidence 33333321 11234444554 5667999999999888776 4455655554444443322
Q ss_pred HHHHHhcCccccCCCCCCeEEccCCCCceEEEecccccccCH
Q 002031 279 AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 320 (977)
Q Consensus 279 l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 320 (977)
++.+|.++|+|||||..|||++.+ ..|+|.|||+...++.
T Consensus 168 veYcH~k~ivHrdLk~eNilL~~~--mnikIaDfgfS~~~~~ 207 (596)
T KOG0586|consen 168 VEYCHSKNIVHRDLKAENILLDEN--MNIKIADFGFSTFFDY 207 (596)
T ss_pred HHHHhhcceeccccchhhcccccc--cceeeeccccceeecc
Confidence 788899999999999999999965 7799999999988864
|
|
| >cd06618 PKc_MKK7 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 7 | Back alignment and domain information |
|---|
Probab=98.86 E-value=9.6e-09 Score=114.05 Aligned_cols=79 Identities=19% Similarity=0.266 Sum_probs=54.3
Q ss_pred cCCceEEeeccCCCCCCChHHHHhcCCCHHHHHHHHHHHH--HHHHHh-cCccccCCCCCCeEEccCCCCceEEEecccc
Q 002031 239 SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--AHQIYV-DGFFNGDPHPGNFLVSKDPPHRPILLDFGLT 315 (977)
Q Consensus 239 ~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~--l~~i~~-~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~ 315 (977)
....+++|||+.+ .+.++.......++...+...+.+++ +..+|. .|++|+|++|.||+++.+ +.++|+|||++
T Consensus 86 ~~~~~~v~e~~~~-~l~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~i~H~dl~p~nill~~~--~~~kL~dfg~~ 162 (296)
T cd06618 86 DSDVFICMELMST-CLDKLLKRIQGPIPEDILGKMTVAIVKALHYLKEKHGVIHRDVKPSNILLDAS--GNVKLCDFGIS 162 (296)
T ss_pred CCeEEEEeeccCc-CHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhhCCEecCCCcHHHEEEcCC--CCEEECccccc
Confidence 3456899999965 44444322222344444444444433 667886 699999999999999855 89999999998
Q ss_pred cccCH
Q 002031 316 KKLSS 320 (977)
Q Consensus 316 ~~l~~ 320 (977)
..+..
T Consensus 163 ~~~~~ 167 (296)
T cd06618 163 GRLVD 167 (296)
T ss_pred hhccC
Confidence 76643
|
Protein kinases (PKs), MAP kinase kinase 7 (MKK7) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK7 is a dual-specificity PK that phosphorylates and activates it |
| >KOG0599 consensus Phosphorylase kinase gamma subunit [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.85 E-value=4.3e-09 Score=109.38 Aligned_cols=158 Identities=16% Similarity=0.251 Sum_probs=100.2
Q ss_pred cccccCc-cccccccccEEEEEEe-cCCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhccc
Q 002031 117 MFMDFVE-TPLATASIAQVHRATL-VDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPK 194 (977)
Q Consensus 117 ~f~~~d~-~piasaSigqV~~A~l-~~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ 194 (977)
.|...++ +-+|.|..+.|.|+.. ++|.+.|+|+.--...... .+-..++.+...+
T Consensus 15 fy~~y~pkeilgrgvss~vrRci~k~t~~e~a~kii~~~at~~~-----------------------~e~~~~~~EaT~~ 71 (411)
T KOG0599|consen 15 FYAKYEPKEILGRGVSSVVRRCIHKETGKEFAVKIIDVTATTES-----------------------GETPYEMREATRQ 71 (411)
T ss_pred HHhhcChHHHhcccchhhhhhhhhcccccceeEEEEEecccccC-----------------------CccHHHHHHHHHH
Confidence 3444443 5688888889988886 4789999998642221110 0113333333333
Q ss_pred ccCcHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeee-cCCceEEeeccCCCCCCChHHHHhcCCCH---HHH
Q 002031 195 ELDFNSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAFGVNK---QKV 270 (977)
Q Consensus 195 Eld~~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLVmE~i~G~~L~~~~~~~~~~~~~---~~l 270 (977)
|++ .+++... ....+.+-.+|. ++--+||.|.++-+.|-|+.... --++. ..+
T Consensus 72 Ev~---------ILRqv~G-------------HP~II~l~D~yes~sF~FlVFdl~prGELFDyLts~-VtlSEK~tR~i 128 (411)
T KOG0599|consen 72 EIS---------ILRQVMG-------------HPYIIDLQDVYESDAFVFLVFDLMPRGELFDYLTSK-VTLSEKETRRI 128 (411)
T ss_pred HHH---------HHHHhcC-------------CCcEEEeeeeccCcchhhhhhhhcccchHHHHhhhh-eeecHHHHHHH
Confidence 332 2333222 122345556665 45567999999988887774321 11222 334
Q ss_pred HHHHHHHHHHHHHhcCccccCCCCCCeEEccCCCCceEEEecccccccCHHHH
Q 002031 271 VEEITRAYAHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSSSMK 323 (977)
Q Consensus 271 ~~~l~~~~l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~~~r 323 (977)
.+.+++. ...+|..+|+|||+||.|||++++ .+|+|.|||.++++.+..+
T Consensus 129 Mrqlfeg-VeylHa~~IVHRDLKpENILlddn--~~i~isDFGFa~~l~~Gek 178 (411)
T KOG0599|consen 129 MRQLFEG-VEYLHARNIVHRDLKPENILLDDN--MNIKISDFGFACQLEPGEK 178 (411)
T ss_pred HHHHHHH-HHHHHHhhhhhcccChhheeeccc--cceEEeccceeeccCCchh
Confidence 4444443 667899999999999999999965 8999999999999987543
|
|
| >cd08226 PK_STRAD_beta Pseudokinase domain of STE20-related kinase adapter protein beta | Back alignment and domain information |
|---|
Probab=98.85 E-value=1e-08 Score=115.68 Aligned_cols=76 Identities=16% Similarity=0.088 Sum_probs=56.1
Q ss_pred cCCceEEeeccCCCCCCChHHHH-hcCCCHHHHHHHHHHHH--HHHHHhcCccccCCCCCCeEEccCCCCceEEEecccc
Q 002031 239 SSETVLILEFMDGIRLNDCESLE-AFGVNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLT 315 (977)
Q Consensus 239 ~~~~vLVmE~i~G~~L~~~~~~~-~~~~~~~~l~~~l~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~ 315 (977)
....++||||+.|.++.++.... ..+.+...+...+.+++ +..+|..|++|+|+||.||+++.+ +.+++.|||.+
T Consensus 71 ~~~~~~v~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~qi~~aL~~lH~~~ivHrDlkp~Nill~~~--~~~~~~~~~~~ 148 (328)
T cd08226 71 GSWLWVISPFMAYGSANSLLKTYFPEGMSEALIGNILFGALRGLNYLHQNGYIHRNIKASHILISGD--GLVSLSGLSHL 148 (328)
T ss_pred CCceEEEEecccCCCHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEeCC--CcEEEechHHH
Confidence 45568999999999987764321 12345554444444443 778899999999999999999865 88999999765
Q ss_pred c
Q 002031 316 K 316 (977)
Q Consensus 316 ~ 316 (977)
.
T Consensus 149 ~ 149 (328)
T cd08226 149 Y 149 (328)
T ss_pred h
Confidence 3
|
Protein Kinase family, STE20-related kinase adapter protein (STRAD) beta subfamily, pseudokinase domain. The STRAD-beta subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpig |
| >cd07852 STKc_MAPK15 Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15 | Back alignment and domain information |
|---|
Probab=98.85 E-value=1.1e-08 Score=115.85 Aligned_cols=140 Identities=20% Similarity=0.205 Sum_probs=87.7
Q ss_pred cccccccccEEEEEEec-CCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCcHHHH
Q 002031 124 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (977)
Q Consensus 124 ~piasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea 202 (977)
+.||.|++|.||+|+.. +|+.||||.........- ....+.+|.
T Consensus 13 ~~lg~g~~~~v~~~~~~~~~~~~~vK~~~~~~~~~~-----------------------------------~~~~~~~E~ 57 (337)
T cd07852 13 QKLGKGAYGIVWKAIDRRTKEVVALKKIFDAFRNAT-----------------------------------DAQRTFREI 57 (337)
T ss_pred HhhcCCCCeeEEEEEEcCCCeEEEEEeeccccCcch-----------------------------------hhhhhhHHH
Confidence 57999999999999975 689999997643211000 000233455
Q ss_pred HHHHHH-HHHhCCCCCCCCCCCCCCCCCCeEeceeeec---CCceEEeeccCCCCCCChHHHHhcCCCHHHHHHHHHHHH
Q 002031 203 ENTRIV-SANLGCKNKHEDSNKKPAYEVDVLIPEVIQS---SETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY 278 (977)
Q Consensus 203 ~n~~~~-~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~~---~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~ 278 (977)
..+.++ .+ ...+.+..++.. ...++||||++| +|.+.. ....++.......+.+++
T Consensus 58 ~~l~~l~~h-----------------~ni~~~~~~~~~~~~~~~~lv~e~~~~-~L~~~~--~~~~~~~~~~~~i~~qi~ 117 (337)
T cd07852 58 MFLQELGDH-----------------PNIVKLLNVIKAENDKDIYLVFEYMET-DLHAVI--RANILEDVHKRYIMYQLL 117 (337)
T ss_pred HHHHHhcCC-----------------CCccceeeeeccCCCceEEEEeccccc-CHHHHH--hcCCCCHHHHHHHHHHHH
Confidence 555554 21 111222222221 235899999986 554432 222334333333333332
Q ss_pred --HHHHHhcCccccCCCCCCeEEccCCCCceEEEecccccccCH
Q 002031 279 --AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 320 (977)
Q Consensus 279 --l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 320 (977)
+..+|..|++|+|++|.||+++.+ +.++|+|||++..+..
T Consensus 118 ~~L~~LH~~~i~H~dl~p~nill~~~--~~~kl~d~g~~~~~~~ 159 (337)
T cd07852 118 KALKYIHSGNVIHRDLKPSNILLNSD--CRVKLADFGLARSLSE 159 (337)
T ss_pred HHHHHHHHCCeecCCCCHHHEEEcCC--CcEEEeeccchhcccc
Confidence 678899999999999999999865 8999999999886643
|
Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimul |
| >cd07834 STKc_MAPK Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase | Back alignment and domain information |
|---|
Probab=98.85 E-value=4.5e-09 Score=118.59 Aligned_cols=77 Identities=16% Similarity=0.286 Sum_probs=55.6
Q ss_pred CceEEeeccCCCCCCChHHHHhcCCCHHHHHHHHHHHH--HHHHHhcCccccCCCCCCeEEccCCCCceEEEeccccccc
Q 002031 241 ETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKL 318 (977)
Q Consensus 241 ~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l 318 (977)
..+++|||+++ +|.+... ....++...+...+.+++ +..+|..|++|+|+||.||+++.+ +.++|+|||++...
T Consensus 78 ~~~lv~e~~~~-~l~~~l~-~~~~l~~~~~~~i~~~l~~~l~~LH~~gi~H~dlkp~nili~~~--~~~~L~dfg~~~~~ 153 (330)
T cd07834 78 DVYIVTELMET-DLHKVIK-SPQPLTDDHIQYFLYQILRGLKYLHSANVIHRDLKPSNILVNSN--CDLKICDFGLARGV 153 (330)
T ss_pred ceEEEecchhh-hHHHHHh-CCCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCC--CCEEEcccCceEee
Confidence 45899999985 4544321 111344444444444433 678999999999999999999865 89999999999887
Q ss_pred CHH
Q 002031 319 SSS 321 (977)
Q Consensus 319 ~~~ 321 (977)
...
T Consensus 154 ~~~ 156 (330)
T cd07834 154 DPD 156 (330)
T ss_pred ccc
Confidence 654
|
Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and |
| >smart00220 S_TKc Serine/Threonine protein kinases, catalytic domain | Back alignment and domain information |
|---|
Probab=98.84 E-value=6.4e-09 Score=110.43 Aligned_cols=79 Identities=23% Similarity=0.337 Sum_probs=60.9
Q ss_pred CCceEEeeccCCCCCCChHHHHhcCCCHHHHHHHHHHHH--HHHHHhcCccccCCCCCCeEEccCCCCceEEEecccccc
Q 002031 240 SETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKK 317 (977)
Q Consensus 240 ~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~ 317 (977)
...+++|||+++.+|.++.... ...+...+...+.++. +..+|..|++|+|++|.||+++.+ +.++|+|||.+..
T Consensus 60 ~~~~l~~e~~~~~~L~~~~~~~-~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~~i~~~ni~~~~~--~~~~l~d~~~~~~ 136 (244)
T smart00220 60 DKLYLVMEYCDGGDLFDLLKKR-GRLSEDEARFYARQILSALEYLHSNGIIHRDLKPENILLDED--GHVKLADFGLARQ 136 (244)
T ss_pred CEEEEEEeCCCCCCHHHHHHhc-cCCCHHHHHHHHHHHHHHHHHHHHcCeecCCcCHHHeEECCC--CcEEEccccceee
Confidence 5568999999998888764322 1245555555554443 778899999999999999999865 8999999999988
Q ss_pred cCHH
Q 002031 318 LSSS 321 (977)
Q Consensus 318 l~~~ 321 (977)
+...
T Consensus 137 ~~~~ 140 (244)
T smart00220 137 LDPG 140 (244)
T ss_pred eccc
Confidence 7654
|
Phosphotransferases. Serine or threonine-specific kinase subfamily. |
| >cd08225 STKc_Nek5 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5 | Back alignment and domain information |
|---|
Probab=98.84 E-value=6.8e-09 Score=112.14 Aligned_cols=144 Identities=15% Similarity=0.167 Sum_probs=89.7
Q ss_pred cccccccccEEEEEEec-CCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCcHHHH
Q 002031 124 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (977)
Q Consensus 124 ~piasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea 202 (977)
++++.|++|.||+++.+ +|..||+|.....-... . .+-.+.+|.
T Consensus 6 ~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~--~---------------------------------~~~~~~~E~ 50 (257)
T cd08225 6 KKIGEGSFGKIYLAKAKSDSEHCVIKEIDLTKMPV--K---------------------------------EKEASKKEV 50 (257)
T ss_pred EEecCCCcceEEEEEEcCCCceEEEEEeeHhhccc--h---------------------------------hhHHHHHHH
Confidence 67999999999999985 68999999764310000 0 000123344
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeee-cCCceEEeeccCCCCCCChHHHHh-cCCCHHHHHHHHHHHH--
Q 002031 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLEA-FGVNKQKVVEEITRAY-- 278 (977)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLVmE~i~G~~L~~~~~~~~-~~~~~~~l~~~l~~~~-- 278 (977)
..+..+++ ...+.+...+. ....+++|||++|.+|.+...... ...+...+...+.++.
T Consensus 51 ~~l~~~~h-----------------~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~~ 113 (257)
T cd08225 51 ILLAKMKH-----------------PNIVTFFASFQENGRLFIVMEYCDGGDLMKRINRQRGVLFSEDQILSWFVQISLG 113 (257)
T ss_pred HHHHhCCC-----------------CChhhhhheeccCCeEEEEEecCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHH
Confidence 44333321 00111111111 455689999999999977643211 1234444444444433
Q ss_pred HHHHHhcCccccCCCCCCeEEccCCCCceEEEecccccccCH
Q 002031 279 AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 320 (977)
Q Consensus 279 l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 320 (977)
+..+|..|++|+|++|.||+++.+ +..++|+|||.+..+..
T Consensus 114 l~~lh~~~i~H~dl~~~nil~~~~-~~~~~l~d~~~~~~~~~ 154 (257)
T cd08225 114 LKHIHDRKILHRDIKSQNIFLSKN-GMVAKLGDFGIARQLND 154 (257)
T ss_pred HHHHHHCCcccccCCHHHEEEcCC-CCeEEecccccchhccC
Confidence 678899999999999999999865 23569999998876643
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown. |
| >KOG1035 consensus eIF-2alpha kinase GCN2 [Translation, ribosomal structure and biogenesis] | Back alignment and domain information |
|---|
Probab=98.83 E-value=2.1e-09 Score=131.22 Aligned_cols=74 Identities=19% Similarity=0.298 Sum_probs=53.2
Q ss_pred eEEeeccCCCCCCChHHHHhcCCCHHHHHHHHHHHH--HHHHHhcCccccCCCCCCeEEccCCCCceEEEeccccccc
Q 002031 243 VLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKL 318 (977)
Q Consensus 243 vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l 318 (977)
++-||||+-..+.++..-....-.+...-+...+++ +.+||..|+||||+||.||+++.+ +.|+|.|||++..+
T Consensus 672 YIQMEyCE~~ll~~iI~~N~~~~~~d~~wrLFreIlEGLaYIH~~giIHRDLKP~NIFLd~~--~~VKIGDFGLAt~~ 747 (1351)
T KOG1035|consen 672 YIQMEYCEKTLLRDIIRRNHFNSQRDEAWRLFREILEGLAYIHDQGIIHRDLKPRNIFLDSR--NSVKIGDFGLATDL 747 (1351)
T ss_pred EEEHhhhhhhHHHHHHHhcccchhhHHHHHHHHHHHHHHHHHHhCceeeccCCcceeEEcCC--CCeeecccccchhh
Confidence 689999998777776432222112333322222232 778999999999999999999955 89999999999764
|
|
| >KOG0579 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=98.82 E-value=1.5e-09 Score=123.26 Aligned_cols=80 Identities=18% Similarity=0.219 Sum_probs=60.3
Q ss_pred cCCceEEeeccCCCCCCChHHHHhcCCCHHHHHHHHHHHH--HHHHHhcCccccCCCCCCeEEccCCCCceEEEeccccc
Q 002031 239 SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTK 316 (977)
Q Consensus 239 ~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~ 316 (977)
.++.++..|||.|+-++.+.---..++....|-..+.+.+ +..+|..+|+|||+|.||||++-| |.|.|.|||...
T Consensus 101 enkLwiliEFC~GGAVDaimlEL~r~LtE~QIqvvc~q~ldALn~LHs~~iIHRDLKAGNiL~Tld--GdirLADFGVSA 178 (1187)
T KOG0579|consen 101 ENKLWILIEFCGGGAVDAIMLELGRVLTEDQIQVVCYQVLDALNWLHSQNIIHRDLKAGNILLTLD--GDIRLADFGVSA 178 (1187)
T ss_pred cCceEEEEeecCCchHhHHHHHhccccchHHHHHHHHHHHHHHHHHhhcchhhhhccccceEEEec--CcEeeecccccc
Confidence 5677899999999998876433334444444333333333 778999999999999999999977 999999999987
Q ss_pred ccCH
Q 002031 317 KLSS 320 (977)
Q Consensus 317 ~l~~ 320 (977)
....
T Consensus 179 Kn~~ 182 (1187)
T KOG0579|consen 179 KNKS 182 (1187)
T ss_pred cchh
Confidence 6644
|
|
| >cd07858 STKc_TEY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TEY Mitogen-Activated Protein Kinases from Plants | Back alignment and domain information |
|---|
Probab=98.81 E-value=9.2e-09 Score=116.64 Aligned_cols=76 Identities=18% Similarity=0.293 Sum_probs=54.6
Q ss_pred CceEEeeccCCCCCCChHHHHhcCCCHHHHHHHHHHHH--HHHHHhcCccccCCCCCCeEEccCCCCceEEEeccccccc
Q 002031 241 ETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKL 318 (977)
Q Consensus 241 ~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l 318 (977)
..+|||||++| .|.+... ....+....+...+.+++ +..+|..|++|+|+||.||+++.+ +.++|+|||++...
T Consensus 83 ~~~lv~e~~~~-~L~~~~~-~~~~l~~~~~~~i~~qi~~aL~~LH~~~i~H~dlkp~Nil~~~~--~~~kL~Dfg~~~~~ 158 (337)
T cd07858 83 DVYIVYELMDT-DLHQIIR-SSQTLSDDHCQYFLYQLLRGLKYIHSANVLHRDLKPSNLLLNAN--CDLKICDFGLARTT 158 (337)
T ss_pred cEEEEEeCCCC-CHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEEcCC--CCEEECcCcccccc
Confidence 45899999975 4544321 112344445444444443 778999999999999999999865 88999999998766
Q ss_pred CH
Q 002031 319 SS 320 (977)
Q Consensus 319 ~~ 320 (977)
..
T Consensus 159 ~~ 160 (337)
T cd07858 159 SE 160 (337)
T ss_pred CC
Confidence 43
|
Serine/Threonine Kinases (STKs), Plant TEY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TEY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activati |
| >KOG0596 consensus Dual specificity; serine/threonine and tyrosine kinase [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=98.81 E-value=7.1e-09 Score=117.27 Aligned_cols=140 Identities=17% Similarity=0.260 Sum_probs=89.8
Q ss_pred cccccccccEEEEEEecCCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCcHHHHH
Q 002031 124 TPLATASIAQVHRATLVDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEAE 203 (977)
Q Consensus 124 ~piasaSigqV~~A~l~~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea~ 203 (977)
+-||+|+-+.||++...+.+-+|+|-.. ....|-+ .++ -|++|..
T Consensus 367 k~iG~GGSSkV~kV~~s~~~iyalkkv~-----~~~~D~q--------------------tl~----------gy~nEI~ 411 (677)
T KOG0596|consen 367 KQIGSGGSSKVFKVLNSDKQIYALKKVV-----LLEADNQ--------------------TLD----------GYRNEIA 411 (677)
T ss_pred HhhcCCCcceeeeeecCCCcchhhhHHH-----HhhcCHH--------------------HHH----------HHHHHHH
Confidence 5799999999999987666777776211 0001111 112 3677888
Q ss_pred HHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeee----cCCceEEeeccCCCCCCChHHHHhcCCCH----HHHHHHHH
Q 002031 204 NTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ----SSETVLILEFMDGIRLNDCESLEAFGVNK----QKVVEEIT 275 (977)
Q Consensus 204 n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~----~~~~vLVmE~i~G~~L~~~~~~~~~~~~~----~~l~~~l~ 275 (977)
-+.+|... ..|-++|. .+..|+|||+=+ ..|..+.... ..... ..+.+.++
T Consensus 412 lL~KLkg~-------------------~~IIqL~DYEv~d~~lYmvmE~Gd-~DL~kiL~k~-~~~~~~~~lk~ywkqML 470 (677)
T KOG0596|consen 412 LLNKLKGH-------------------DKIIQLYDYEVTDGYLYMVMECGD-IDLNKILKKK-KSIDPDWFLKFYWKQML 470 (677)
T ss_pred HHHHhcCC-------------------ceEEEEeeeeccCceEEEEeeccc-ccHHHHHHhc-cCCCchHHHHHHHHHHH
Confidence 88877642 34445553 456689999754 4455443211 12222 12222232
Q ss_pred HHHHHHHHhcCccccCCCCCCeEEccCCCCceEEEecccccccCHHHH
Q 002031 276 RAYAHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSSSMK 323 (977)
Q Consensus 276 ~~~l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~~~r 323 (977)
. .++.||.+||||+||||.|+|+- .|+++|||||++..+..+..
T Consensus 471 ~-aV~~IH~~gIVHSDLKPANFLlV---kG~LKLIDFGIA~aI~~DTT 514 (677)
T KOG0596|consen 471 L-AVKTIHQHGIVHSDLKPANFLLV---KGRLKLIDFGIANAIQPDTT 514 (677)
T ss_pred H-HHHHHHHhceeecCCCcccEEEE---eeeEEeeeechhcccCcccc
Confidence 2 26778999999999999999885 38999999999998876543
|
|
| >KOG4645 consensus MAPKKK (MAP kinase kinase kinase) SSK2 and related serine/threonine protein kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=98.79 E-value=3.8e-09 Score=129.56 Aligned_cols=78 Identities=18% Similarity=0.226 Sum_probs=56.4
Q ss_pred CCceEEeeccCCCCCCChHHHHhcCCCHHHHHHHHH---HHHHHHHHhcCccccCCCCCCeEEccCCCCceEEEeccccc
Q 002031 240 SETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEIT---RAYAHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTK 316 (977)
Q Consensus 240 ~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~---~~~l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~ 316 (977)
.+-+|-||||+|++|.++.+.. +...+.+.+... -.-+..||++|||||||||.||+++.. |-|++.|||++.
T Consensus 1307 ekv~IFMEyC~~GsLa~ll~~g--ri~dE~vt~vyt~qll~gla~LH~~gIVHRDIK~aNI~Ld~~--g~iK~~DFGsa~ 1382 (1509)
T KOG4645|consen 1307 EKVYIFMEYCEGGSLASLLEHG--RIEDEMVTRVYTKQLLEGLAYLHEHGIVHRDIKPANILLDFN--GLIKYGDFGSAV 1382 (1509)
T ss_pred HHHHHHHHHhccCcHHHHHHhc--chhhhhHHHHHHHHHHHHHHHHHhcCceecCCCccceeeecC--CcEEeeccccee
Confidence 3446889999999999975422 222221111111 111667899999999999999999966 899999999999
Q ss_pred ccCHH
Q 002031 317 KLSSS 321 (977)
Q Consensus 317 ~l~~~ 321 (977)
.+...
T Consensus 1383 ki~~~ 1387 (1509)
T KOG4645|consen 1383 KIKNN 1387 (1509)
T ss_pred EecCc
Confidence 88654
|
|
| >cd08216 PK_STRAD Pseudokinase domain of STE20-related kinase adapter protein | Back alignment and domain information |
|---|
Probab=98.79 E-value=2.1e-08 Score=112.17 Aligned_cols=79 Identities=15% Similarity=0.166 Sum_probs=59.3
Q ss_pred cCCceEEeeccCCCCCCChHHHH-hcCCCHHHHHHHHHHHH--HHHHHhcCccccCCCCCCeEEccCCCCceEEEecccc
Q 002031 239 SSETVLILEFMDGIRLNDCESLE-AFGVNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLT 315 (977)
Q Consensus 239 ~~~~vLVmE~i~G~~L~~~~~~~-~~~~~~~~l~~~l~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~ 315 (977)
....+++|||+++.++.++.... ..+.+...+...+.+++ +..+|..|++|+|+||+||+++.+ +.++|.|||.+
T Consensus 71 ~~~~~~~~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~LH~~~ivH~dlk~~Nili~~~--~~~kl~d~~~~ 148 (314)
T cd08216 71 DSELYVVSPLMAYGSCEDLLKTHFPEGLPELAIAFILKDVLNALDYIHSKGFIHRSVKASHILLSGD--GKVVLSGLRYS 148 (314)
T ss_pred CCeEEEEEeccCCCCHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCcceEEEecC--CceEEecCccc
Confidence 45568999999999988764422 12344444444444433 778899999999999999999865 89999999988
Q ss_pred cccC
Q 002031 316 KKLS 319 (977)
Q Consensus 316 ~~l~ 319 (977)
..+.
T Consensus 149 ~~~~ 152 (314)
T cd08216 149 VSMI 152 (314)
T ss_pred eeec
Confidence 7664
|
Protein Kinase family, STE20-related kinase adapter protein (STRAD) subfamily, pseudokinase domain. The STRAD subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpigmentation of the buc |
| >KOG0199 consensus ACK and related non-receptor tyrosine kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=98.79 E-value=5.4e-09 Score=120.59 Aligned_cols=140 Identities=19% Similarity=0.213 Sum_probs=96.7
Q ss_pred cccccccccEEEEEEec--CCC--EEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCcH
Q 002031 124 TPLATASIAQVHRATLV--DGR--QVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFN 199 (977)
Q Consensus 124 ~piasaSigqV~~A~l~--~G~--~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~ 199 (977)
+-||+||||.||+|.+. +|+ .||||+++++....+ ++ ||+
T Consensus 116 e~LG~GsFgvV~rg~Wt~psgk~V~VAVKclr~d~l~~~--------------------------md----------dfl 159 (1039)
T KOG0199|consen 116 ELLGEGSFGVVKRGTWTQPSGKHVNVAVKCLRDDSLNAI--------------------------MD----------DFL 159 (1039)
T ss_pred HHhcCcceeeEeeccccCCCCcEEeEEEEeccCCccchh--------------------------HH----------HHH
Confidence 35899999999999874 565 589999988765321 11 788
Q ss_pred HHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeee---cCCceEEeeccCCCCCCChHHHH-hcCCCHHHHHHHHH
Q 002031 200 SEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ---SSETVLILEFMDGIRLNDCESLE-AFGVNKQKVVEEIT 275 (977)
Q Consensus 200 ~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~---~~~~vLVmE~i~G~~L~~~~~~~-~~~~~~~~l~~~l~ 275 (977)
+|+..+.+++|. ++-++|. .....+|||.+++++|-+..... ...+-...+...+.
T Consensus 160 rEas~M~~L~H~--------------------hliRLyGvVl~qp~mMV~ELaplGSLldrLrka~~~~llv~~Lcdya~ 219 (1039)
T KOG0199|consen 160 REASHMLKLQHP--------------------HLIRLYGVVLDQPAMMVFELAPLGSLLDRLRKAKKAILLVSRLCDYAM 219 (1039)
T ss_pred HHHHHHHhccCc--------------------ceeEEeeeeccchhhHHhhhcccchHHHHHhhccccceeHHHHHHHHH
Confidence 999999887651 2223332 44557899999999997653321 11122233333333
Q ss_pred HHH--HHHHHhcCccccCCCCCCeEEccCCCCceEEEecccccccCHH
Q 002031 276 RAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSSS 321 (977)
Q Consensus 276 ~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~~ 321 (977)
++. +..+-..++||||+-..|+|+-.. ..|+|+|||+++.|...
T Consensus 220 QiA~aM~YLeskrlvHRDLAARNlllasp--rtVKI~DFGLmRaLg~n 265 (1039)
T KOG0199|consen 220 QIAKAMQYLESKRLVHRDLAARNLLLASP--RTVKICDFGLMRALGEN 265 (1039)
T ss_pred HHHHHHHHHhhhhhhhhhhhhhhheeccc--ceeeeecccceeccCCC
Confidence 333 444456899999999999999754 68999999999998653
|
|
| >KOG0984 consensus Mitogen-activated protein kinase (MAPK) kinase MKK3/MKK6 [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=98.78 E-value=2.3e-08 Score=100.44 Aligned_cols=80 Identities=21% Similarity=0.337 Sum_probs=53.7
Q ss_pred cCCceEEeeccCCCCCCChHH--HHhcCCCHHH----HHHHHHHHHHHHHHh-cCccccCCCCCCeEEccCCCCceEEEe
Q 002031 239 SSETVLILEFMDGIRLNDCES--LEAFGVNKQK----VVEEITRAYAHQIYV-DGFFNGDPHPGNFLVSKDPPHRPILLD 311 (977)
Q Consensus 239 ~~~~vLVmE~i~G~~L~~~~~--~~~~~~~~~~----l~~~l~~~~l~~i~~-~G~~H~D~hPgNIlv~~~~~g~i~LiD 311 (977)
+.+-++.||.++ .+|+.+-. +...+.-++. ++-.++++ +..+|. ..++|||+||+|||++.+ |+++++|
T Consensus 117 egdvwIcME~M~-tSldkfy~~v~~~g~~ipE~vlGkIa~Svv~a-l~~L~~kL~vIHRDvKPsNiLIn~~--GqVKiCD 192 (282)
T KOG0984|consen 117 EGDVWICMELMD-TSLDKFYRKVLKKGGTIPEDVLGKIAVSVVHA-LEFLHSKLSVIHRDVKPSNILINYD--GQVKICD 192 (282)
T ss_pred cccEEEeHHHhh-hhHHHHHHHHHhcCCcCchHHhhHhHHHHHHH-HHHHHHHhhhhhccCCcceEEEccC--CcEEEcc
Confidence 788899999996 34433211 1222222222 33333333 445553 689999999999999977 9999999
Q ss_pred cccccccCHHH
Q 002031 312 FGLTKKLSSSM 322 (977)
Q Consensus 312 FG~~~~l~~~~ 322 (977)
||+++.+.+..
T Consensus 193 FGIsG~L~dSi 203 (282)
T KOG0984|consen 193 FGISGYLVDSI 203 (282)
T ss_pred cccceeehhhh
Confidence 99999987643
|
|
| >KOG3087 consensus Serine/threonine protein kinase [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.76 E-value=7.3e-08 Score=95.92 Aligned_cols=145 Identities=21% Similarity=0.293 Sum_probs=93.4
Q ss_pred CccccccccccEEEEEEecCCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCcHHH
Q 002031 122 VETPLATASIAQVHRATLVDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSE 201 (977)
Q Consensus 122 d~~piasaSigqV~~A~l~~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~E 201 (977)
+..++-.|.-|.|+++.. +|+..+||-..|.--+.=..|.++-+ . ...+|
T Consensus 11 ~l~likQGAEArv~~~~~-~Ge~~iIK~Rf~K~YRHP~LD~kLtr------------------------~-----Rt~~E 60 (229)
T KOG3087|consen 11 SLELIKQGAEARVPRGSF-SGEAAIIKERFSKRYRHPALDQKLTR------------------------K-----RTKQE 60 (229)
T ss_pred cceeeeccceeeEeeecc-CCceeEEeecccccccchHHHHHHHH------------------------H-----HHHHH
Confidence 356788899999999986 79999999653321111111211111 0 23568
Q ss_pred HHHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeee--cCCceEEeeccCC-CCCCChHHHHh-cC-CCHH--HHHHHH
Q 002031 202 AENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ--SSETVLILEFMDG-IRLNDCESLEA-FG-VNKQ--KVVEEI 274 (977)
Q Consensus 202 a~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~--~~~~vLVmE~i~G-~~L~~~~~~~~-~~-~~~~--~l~~~l 274 (977)
|+.+.+++. .++.+|.++. .....|.|||++| .++.+.....- .. .+.. .++..+
T Consensus 61 ar~l~k~~~------------------~GI~~P~l~~~D~~~~~i~ME~~~g~~~vk~~i~~~~~~~~~d~~~~~~~~~i 122 (229)
T KOG3087|consen 61 ARLLAKCRA------------------LGIPAPRLIFIDTYGGQIYMEFIDGASTVKDFILSTMEDESEDEGLAELARRI 122 (229)
T ss_pred HHHHHHHHH------------------hCCCCceEEEEecCCCeEEEEeccchhHHHHHHHHHccCcccchhHHHHHHHH
Confidence 888887765 2688999987 5678999999999 34444322111 11 1111 233333
Q ss_pred HHHHHHHHHhcCccccCCCCCCeEEccCCCCc--eEEEeccccc
Q 002031 275 TRAYAHQIYVDGFFNGDPHPGNFLVSKDPPHR--PILLDFGLTK 316 (977)
Q Consensus 275 ~~~~l~~i~~~G~~H~D~hPgNIlv~~~~~g~--i~LiDFG~~~ 316 (977)
-+. +.-+|..+++|+|+--.||++.++ +++ +.|||||+..
T Consensus 123 G~~-igklH~ndiiHGDLTTSNill~~~-~~~~~~~lIdfgls~ 164 (229)
T KOG3087|consen 123 GEL-IGKLHDNDIIHGDLTTSNILLRSD-GNQITPILIDFGLSS 164 (229)
T ss_pred HHH-HHHhhhCCeecccccccceEEecC-CCcCceEEEeecchh
Confidence 332 556799999999999999999876 344 4999999854
|
|
| >KOG0607 consensus MAP kinase-interacting kinase and related serine/threonine protein kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=98.72 E-value=3.1e-08 Score=105.28 Aligned_cols=141 Identities=16% Similarity=0.188 Sum_probs=90.2
Q ss_pred cCccccccccccEEEEEE-ecCCCEEEEEEec--CCh-hhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhccccc
Q 002031 121 FVETPLATASIAQVHRAT-LVDGRQVVVKVQH--QGI-KTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKEL 196 (977)
Q Consensus 121 ~d~~piasaSigqV~~A~-l~~G~~VAVKv~~--p~i-~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~El 196 (977)
+..+-+|+|.+|.|--++ +.+|.++||||.. |+. +.++.++..++....
T Consensus 81 Lt~e~LGeGAyasVqtcv~i~t~~EYAVKiidKq~gHsR~RvfREVe~f~~Cq--------------------------- 133 (463)
T KOG0607|consen 81 LTSELLGEGAYASVQTCVSIQTGKEYAVKIIDKQPGHSRSRVFREVETFYQCQ--------------------------- 133 (463)
T ss_pred hHHHHhcCccceeeeeeeeeccchhhhhhhhhcCCchHHHHHHHHHHHHHHhc---------------------------
Confidence 345789999999999988 4799999999864 332 233333333222110
Q ss_pred CcHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeeecCCceEEeeccCCCCCCChHHHHhcCCCHHHHHHHH--
Q 002031 197 DFNSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQSSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEI-- 274 (977)
Q Consensus 197 d~~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l-- 274 (977)
--.|+..+-+.|++ .++-|||||-+.|++|-.... +...++..+..+.+
T Consensus 134 ----gh~nilqLiefFEd------------------------d~~FYLVfEKm~GGplLshI~-~~~~F~E~EAs~vvkd 184 (463)
T KOG0607|consen 134 ----GHKNILQLIEFFED------------------------DTRFYLVFEKMRGGPLLSHIQ-KRKHFNEREASRVVKD 184 (463)
T ss_pred ----CCccHHHHHHHhcc------------------------cceEEEEEecccCchHHHHHH-HhhhccHHHHHHHHHH
Confidence 01244445554442 456689999999999865432 22234433333322
Q ss_pred HHHHHHHHHhcCccccCCCCCCeEEccCC-CCceEEEecccccc
Q 002031 275 TRAYAHQIYVDGFFNGDPHPGNFLVSKDP-PHRPILLDFGLTKK 317 (977)
Q Consensus 275 ~~~~l~~i~~~G~~H~D~hPgNIlv~~~~-~g~i~LiDFG~~~~ 317 (977)
+...+..+|..||-|||+||.|||..+.+ -.-|+|+||-+...
T Consensus 185 ia~aLdFlH~kgIAHRDlKPENiLC~~pn~vsPvKiCDfDLgSg 228 (463)
T KOG0607|consen 185 IASALDFLHTKGIAHRDLKPENILCESPNKVSPVKICDFDLGSG 228 (463)
T ss_pred HHHHHHHHhhcCcccccCCccceeecCCCCcCceeeeccccccc
Confidence 22348899999999999999999987431 12478999977544
|
|
| >cd05154 ACAD10_11_like Acyl-CoA dehydrogenase (ACAD) 10 and 11, N-terminal domain, and similar proteins | Back alignment and domain information |
|---|
Probab=98.72 E-value=7.9e-08 Score=101.62 Aligned_cols=145 Identities=22% Similarity=0.280 Sum_probs=89.9
Q ss_pred CccccccccccEEEEEEecCCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCcHHH
Q 002031 122 VETPLATASIAQVHRATLVDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSE 201 (977)
Q Consensus 122 d~~piasaSigqV~~A~l~~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~E 201 (977)
+-+|++.|..++||+++..+|+.++||+.+++... ....++.+|
T Consensus 2 ~~~~l~~G~~n~~~~v~~~~g~~~ilK~~~~~~~~------------------------------------~~~~~~~~E 45 (223)
T cd05154 2 EVRQLSGGQSNLTYLLTAGGGRRLVLRRPPPGALL------------------------------------PSAHDVARE 45 (223)
T ss_pred cceecCCCccceEEEEEecCCcceEEEeCCCcccC------------------------------------cccccHHHH
Confidence 34789999999999999877799999986543210 011245677
Q ss_pred HHHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeee-c-C-----CceEEeeccCCCCCCChHH--------H----Hh
Q 002031 202 AENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-S-S-----ETVLILEFMDGIRLNDCES--------L----EA 262 (977)
Q Consensus 202 a~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~-~-----~~vLVmE~i~G~~L~~~~~--------~----~~ 262 (977)
++.+..+++ ..+.+|+++. + . ..+++|||++|.++.+... . ..
T Consensus 46 ~~~~~~l~~------------------~~~~vp~~~~~~~~~~~~~~~~~v~e~i~G~~l~~~~~~~~~~~~~~~~i~~~ 107 (223)
T cd05154 46 YRVLRALAG------------------TGVPVPKVLALCEDPSVLGTPFYVMERVDGRVLRDRLLRPELSPEERRALARA 107 (223)
T ss_pred HHHHHHhhC------------------CCCCCCCEEEECCCCCccCCceEEEEEeCCEecCCCCCCCCCCHHHHHHHHHH
Confidence 777777654 1356777765 1 1 3589999999998876421 0 00
Q ss_pred --------cCCCH----------------HHHHH---HH----------HHHHHHHH-------HhcCccccCCCCCCeE
Q 002031 263 --------FGVNK----------------QKVVE---EI----------TRAYAHQI-------YVDGFFNGDPHPGNFL 298 (977)
Q Consensus 263 --------~~~~~----------------~~l~~---~l----------~~~~l~~i-------~~~G~~H~D~hPgNIl 298 (977)
+..+. ..+.. .+ +....+.+ ...+++|+|+||+||+
T Consensus 108 i~~~l~~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~HgD~~~~Nil 187 (223)
T cd05154 108 LADTLAALHSVDPAAVGLGDLGRPGGYLERQVARWRRQYDASRTDEPPAMERLLRWLEAHLPADSRPGLVHGDYRLGNVL 187 (223)
T ss_pred HHHHHHHHhCCChhhcCCcccCCCCchHHHHHHHHHHHHHhhcccccHHHHHHHHHHHhhCCCCCCcEEEECCCCcccEE
Confidence 00000 00000 00 00011111 1368999999999999
Q ss_pred EccCCCCceEEEecccccccCH
Q 002031 299 VSKDPPHRPILLDFGLTKKLSS 320 (977)
Q Consensus 299 v~~~~~g~i~LiDFG~~~~l~~ 320 (977)
++.+.++.+.||||+.++.-++
T Consensus 188 ~~~~~~~~~~iID~e~~~~g~~ 209 (223)
T cd05154 188 FHPDEPRVVAVLDWELATLGDP 209 (223)
T ss_pred EcCCCCcEEEEEeccccccCCh
Confidence 9863135688999999886554
|
This subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This subfamily is composed of bacterial and eukaryotic proteins with similarity to the N-terminal domains of vertebrate ACAD10 and ACAD11. ACADs are a family of flavoproteins that are involved in the beta-oxidation of fatty acyl-CoA derivatives. ACAD deficiency can cause metabolic disorders including muscle fatigue, hypoglycemia, and hepatic lipidosis, among them. There are at least 11 distinct ACADs, some of which show distinct substrate specificities to either straight-chain or branched-chain fatty acids. ACAD10 is widely expressed in human tissues and is highly expressed in liver, kidney, pancreas, and spleen. ACAD10 and ACAD11 contain |
| >KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=98.71 E-value=2.4e-08 Score=115.61 Aligned_cols=80 Identities=21% Similarity=0.231 Sum_probs=57.5
Q ss_pred cCCceEEeeccCCCCCCChHHHHhcCCCHHHHHHHHHHHH--HHHHHhcCccccCCCCCCeEEccCCCCceEEEeccccc
Q 002031 239 SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTK 316 (977)
Q Consensus 239 ~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~ 316 (977)
...-++|||.+.|.-+-+... ............+.++. ++.+|.+|+||||+||+|||++. ..+.|.|+|||..+
T Consensus 388 ~~~~~~v~e~l~g~ell~ri~--~~~~~~~e~~~w~~~lv~Av~~LH~~gvvhRDLkp~NIL~~~-~~g~lrltyFG~a~ 464 (612)
T KOG0603|consen 388 GKEIYLVMELLDGGELLRRIR--SKPEFCSEASQWAAELVSAVDYLHEQGVVHRDLKPGNILLDG-SAGHLRLTYFGFWS 464 (612)
T ss_pred CceeeeeehhccccHHHHHHH--hcchhHHHHHHHHHHHHHHHHHHHhcCeeecCCChhheeecC-CCCcEEEEEechhh
Confidence 345689999999876654322 22222233333444433 88899999999999999999952 24889999999999
Q ss_pred ccCHH
Q 002031 317 KLSSS 321 (977)
Q Consensus 317 ~l~~~ 321 (977)
.+..+
T Consensus 465 ~~~~~ 469 (612)
T KOG0603|consen 465 ELERS 469 (612)
T ss_pred hCchh
Confidence 98776
|
|
| >KOG4717 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=98.70 E-value=3.2e-08 Score=110.55 Aligned_cols=149 Identities=24% Similarity=0.227 Sum_probs=95.7
Q ss_pred ccccccccccEEEEEEe-cCCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCcHHH
Q 002031 123 ETPLATASIAQVHRATL-VDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSE 201 (977)
Q Consensus 123 ~~piasaSigqV~~A~l-~~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~E 201 (977)
++-||.|-|+.|-.|++ -+|+.|||||...--- .|+. .. .+.+|
T Consensus 23 ekTlG~GHFAVVKLArHVFTGekVAVKviDKTKl----D~~s-------------------------t~------hlfqE 67 (864)
T KOG4717|consen 23 EKTLGRGHFAVVKLARHVFTGEKVAVKVIDKTKL----DTLS-------------------------TG------HLFQE 67 (864)
T ss_pred hhhhcCCceehhhhhhhhcccceeEEEEeccccc----chhh-------------------------hh------HHHHH
Confidence 36799999999999986 4899999999742100 0000 00 12234
Q ss_pred HHHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeee-cCCceEEeeccCCCCCCChHHHHhcCCCHHHHHHHHHHHH--
Q 002031 202 AENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY-- 278 (977)
Q Consensus 202 a~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~-- 278 (977)
.+-++..++ ...|..-+|+. .++.||++|.=+|+.|.|+.-....|+.....-....+++
T Consensus 68 VRCMKLVQH-----------------pNiVRLYEViDTQTKlyLiLELGD~GDl~DyImKHe~Gl~E~La~kYF~QI~~A 130 (864)
T KOG4717|consen 68 VRCMKLVQH-----------------PNIVRLYEVIDTQTKLYLILELGDGGDLFDYIMKHEEGLNEDLAKKYFAQIVHA 130 (864)
T ss_pred HHHHHHhcC-----------------cCeeeeeehhcccceEEEEEEecCCchHHHHHHhhhccccHHHHHHHHHHHHHH
Confidence 444444332 12244444444 6888999999999999998655555554322111111211
Q ss_pred HHHHHhcCccccCCCCCCeEEccCCCCceEEEecccccccCHHHHH
Q 002031 279 AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSSSMKQ 324 (977)
Q Consensus 279 l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~~~r~ 324 (977)
+...|..-+||||+||+|+.+-+. -|-++|.|||+.-.+.+..+.
T Consensus 131 I~YCHqLHVVHRDLKPENVVFFEK-lGlVKLTDFGFSNkf~PG~kL 175 (864)
T KOG4717|consen 131 ISYCHQLHVVHRDLKPENVVFFEK-LGLVKLTDFGFSNKFQPGKKL 175 (864)
T ss_pred HHHHhhhhhhcccCCcceeEEeee-cCceEeeeccccccCCCcchh
Confidence 333455679999999999987654 488999999998887665544
|
|
| >cd08222 STKc_Nek11 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 11 | Back alignment and domain information |
|---|
Probab=98.69 E-value=6.6e-08 Score=104.91 Aligned_cols=77 Identities=17% Similarity=0.237 Sum_probs=56.4
Q ss_pred cCCceEEeeccCCCCCCChHHH---HhcCCCHHHHHHHHHHHH--HHHHHhcCccccCCCCCCeEEccCCCCceEEEecc
Q 002031 239 SSETVLILEFMDGIRLNDCESL---EAFGVNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFG 313 (977)
Q Consensus 239 ~~~~vLVmE~i~G~~L~~~~~~---~~~~~~~~~l~~~l~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG 313 (977)
....++||||++|.+|.+.... ....++...+...+.++. +..+|..|++|+|++|.||+++. +.++|+|||
T Consensus 74 ~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~h~~l~~~nili~~---~~~~l~d~g 150 (260)
T cd08222 74 RDAFCIITEYCEGRDLDCKLEELKHTGKTLSENQVCEWFIQLLLGVHYMHQRRILHRDLKAKNIFLKN---NLLKIGDFG 150 (260)
T ss_pred CCceEEEEEeCCCCCHHHHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHcCccccCCChhheEeec---CCEeecccC
Confidence 3456799999999998776432 112344444444444443 67899999999999999999963 579999999
Q ss_pred ccccc
Q 002031 314 LTKKL 318 (977)
Q Consensus 314 ~~~~l 318 (977)
.+..+
T Consensus 151 ~~~~~ 155 (260)
T cd08222 151 VSRLL 155 (260)
T ss_pred ceeec
Confidence 87665
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 11 (Nek11) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek11 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek11 is involved, through direct phosphorylation, in regulating the degradation of Cdc25A (Cell Division Cycle 25 homolog A), which plays a role in cell cycle progression and in activating cyclin dependent kinases. Nek11 is activated by CHK1 (CHeckpoint Kinase 1) and may be involved in the G2/M check |
| >PRK15123 lipopolysaccharide core heptose(I) kinase RfaP; Provisional | Back alignment and domain information |
|---|
Probab=98.69 E-value=1.5e-07 Score=102.69 Aligned_cols=101 Identities=12% Similarity=0.090 Sum_probs=68.9
Q ss_pred cHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceee--e-------cCCceEEeeccCCC-CCCChHHHH-hcCCC
Q 002031 198 FNSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVI--Q-------SSETVLILEFMDGI-RLNDCESLE-AFGVN 266 (977)
Q Consensus 198 ~~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~--~-------~~~~vLVmE~i~G~-~L~~~~~~~-~~~~~ 266 (977)
+.+|.+++.++.+. ++.+|.+. . ..+.+||||+++|. +|.++.... ....+
T Consensus 75 a~rE~~~l~~L~~~------------------GIptP~pVa~~e~~~~~~~~~s~LVte~l~~~~sL~~~~~~~~~~~~~ 136 (268)
T PRK15123 75 ADREWRAIHRLHEV------------------GVDTMTGVAFGERGSNPATRTSFIITEDLAPTISLEDYCADWATNPPD 136 (268)
T ss_pred HHHHHHHHHHHHHc------------------CCCCCCeeEEEEecCCCccceeEEEEeeCCCCccHHHHHHhhcccCCC
Confidence 56788999988762 46677663 2 12468999999986 676663210 11111
Q ss_pred ---HHHHHHHHHHHHHHHHHhcCccccCCCCCCeEEcc-----CCCCceEEEecccccc
Q 002031 267 ---KQKVVEEITRAYAHQIYVDGFFNGDPHPGNFLVSK-----DPPHRPILLDFGLTKK 317 (977)
Q Consensus 267 ---~~~l~~~l~~~~l~~i~~~G~~H~D~hPgNIlv~~-----~~~g~i~LiDFG~~~~ 317 (977)
...+...+.+ ++..+|..|++|+|++|+|||++. +++.++.||||+.+..
T Consensus 137 ~~~~~~ll~~la~-~i~~LH~~Gi~HgDL~~~NiLl~~~~~~~~~~~~~~LIDl~r~~~ 194 (268)
T PRK15123 137 PRLKRMLIKRVAT-MVRDMHAAGINHRDCYICHFLLHLPFPGREEDLKLSVIDLHRAQI 194 (268)
T ss_pred HHHHHHHHHHHHH-HHHHHHHCcCccCCCChhhEEEeccccCCCCCceEEEEECCcccc
Confidence 1233333333 477899999999999999999985 2246899999998853
|
|
| >KOG0696 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=98.67 E-value=1.5e-08 Score=110.46 Aligned_cols=74 Identities=16% Similarity=0.253 Sum_probs=51.2
Q ss_pred CCceEEeeccCCCCCCChHHHHhcC-CCHHHHHHHH--HHHHHHHHHhcCccccCCCCCCeEEccCCCCceEEEeccccc
Q 002031 240 SETVLILEFMDGIRLNDCESLEAFG-VNKQKVVEEI--TRAYAHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTK 316 (977)
Q Consensus 240 ~~~vLVmE~i~G~~L~~~~~~~~~~-~~~~~l~~~l--~~~~l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~ 316 (977)
.+.+.||||+.|+.|--. +...| +.....+-.. +.+-+..+|..||+-||+|-.|||++.+ |.|+|.||||++
T Consensus 423 DRLyFVMEyvnGGDLMyh--iQQ~GkFKEp~AvFYAaEiaigLFFLh~kgIiYRDLKLDNvmLd~e--GHiKi~DFGmcK 498 (683)
T KOG0696|consen 423 DRLYFVMEYVNGGDLMYH--IQQVGKFKEPVAVFYAAEIAIGLFFLHSKGIIYRDLKLDNVMLDSE--GHIKIADFGMCK 498 (683)
T ss_pred hheeeEEEEecCchhhhH--HHHhcccCCchhhhhhHHHHHHhhhhhcCCeeeeeccccceEeccC--CceEeeeccccc
Confidence 345789999999988632 22222 1111111111 2222556899999999999999999966 999999999997
Q ss_pred c
Q 002031 317 K 317 (977)
Q Consensus 317 ~ 317 (977)
+
T Consensus 499 E 499 (683)
T KOG0696|consen 499 E 499 (683)
T ss_pred c
Confidence 5
|
|
| >KOG0986 consensus G protein-coupled receptor kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=98.65 E-value=3.4e-08 Score=109.44 Aligned_cols=144 Identities=17% Similarity=0.170 Sum_probs=102.2
Q ss_pred cccccccccEEEEEEec-CCCEEEEEEec-CChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCcHHH
Q 002031 124 TPLATASIAQVHRATLV-DGRQVVVKVQH-QGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSE 201 (977)
Q Consensus 124 ~piasaSigqV~~A~l~-~G~~VAVKv~~-p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~E 201 (977)
+.||.|+||.||-++.+ +|+-+|.|-+. .-++++ ..|-=-.+|
T Consensus 191 RvlGkGGFGEV~acqvraTGKMYAcKkL~KKRiKkr-----------------------------------~ge~maLnE 235 (591)
T KOG0986|consen 191 RVLGKGGFGEVCACQVRATGKMYACKKLDKKRIKKR-----------------------------------KGETMALNE 235 (591)
T ss_pred EEEecccccceeEEEEecchhhHHHHHHHHHHHHHh-----------------------------------hhhHHhhHH
Confidence 67999999999999875 78888888431 111100 011112345
Q ss_pred HHHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeee---cCCceEEeeccCCCCCCCh-HHHHhcCCCHHHHHHHHHHH
Q 002031 202 AENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ---SSETVLILEFMDGIRLNDC-ESLEAFGVNKQKVVEEITRA 277 (977)
Q Consensus 202 a~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~---~~~~vLVmE~i~G~~L~~~-~~~~~~~~~~~~l~~~l~~~ 277 (977)
...++++.. .+.|--.|. ....+|||..|.|+.|.-. ..+...|++.+++.-..+++
T Consensus 236 k~iL~kV~s-------------------~FiVslaYAfeTkd~LClVLtlMNGGDLkfHiyn~g~~gF~e~ra~FYAAEi 296 (591)
T KOG0986|consen 236 KQILEKVSS-------------------PFIVSLAYAFETKDALCLVLTLMNGGDLKFHIYNHGNPGFDEQRARFYAAEI 296 (591)
T ss_pred HHHHHHhcc-------------------CcEEEEeeeecCCCceEEEEEeecCCceeEEeeccCCCCCchHHHHHHHHHH
Confidence 555555432 344444443 3556899999999998743 22334578888877777776
Q ss_pred H--HHHHHhcCccccCCCCCCeEEccCCCCceEEEecccccccCHHHH
Q 002031 278 Y--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSSSMK 323 (977)
Q Consensus 278 ~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~~~r 323 (977)
+ ++.+|+.+||-||+||.|||+|+. |.+.|.|.|++..+++..+
T Consensus 297 ~cGLehlH~~~iVYRDLKPeNILLDd~--GhvRISDLGLAvei~~g~~ 342 (591)
T KOG0986|consen 297 ICGLEHLHRRRIVYRDLKPENILLDDH--GHVRISDLGLAVEIPEGKP 342 (591)
T ss_pred HhhHHHHHhcceeeccCChhheeeccC--CCeEeeccceEEecCCCCc
Confidence 6 899999999999999999999966 9999999999999987543
|
|
| >KOG2052 consensus Activin A type IB receptor, serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=98.65 E-value=1e-07 Score=105.67 Aligned_cols=142 Identities=16% Similarity=0.165 Sum_probs=97.0
Q ss_pred cccccccccEEEEEEecCCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCcHHHHH
Q 002031 124 TPLATASIAQVHRATLVDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEAE 203 (977)
Q Consensus 124 ~piasaSigqV~~A~l~~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea~ 203 (977)
+-||.|-||.|+||+. -|+.|||||...--+....++-++.+.++- +. +
T Consensus 217 e~IGkGRyGEVwrG~w-rGe~VAVKiF~srdE~SWfrEtEIYqTvmL----------------------------RH--E 265 (513)
T KOG2052|consen 217 EIIGKGRFGEVWRGRW-RGEDVAVKIFSSRDERSWFRETEIYQTVML----------------------------RH--E 265 (513)
T ss_pred EEecCccccceeeccc-cCCceEEEEecccchhhhhhHHHHHHHHHh----------------------------cc--c
Confidence 5699999999999998 489999999765444444444443332210 00 1
Q ss_pred HHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeeecCCceEEeeccCCCCCCChHHHHhcCCCHHHHHHHHHHHH--HHH
Q 002031 204 NTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQSSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--AHQ 281 (977)
Q Consensus 204 n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~--l~~ 281 (977)
|+-.|-.. .+... ...|+.+||++|-+-++|.|+ +...-++.+...+....+. +.+
T Consensus 266 NILgFIaa-----------D~~~~---------gs~TQLwLvTdYHe~GSL~Dy--L~r~tv~~~~ml~LalS~AsGLaH 323 (513)
T KOG2052|consen 266 NILGFIAA-----------DNKDN---------GSWTQLWLVTDYHEHGSLYDY--LNRNTVTTEGMLKLALSIASGLAH 323 (513)
T ss_pred hhhhhhhc-----------cccCC---------CceEEEEEeeecccCCcHHHH--HhhccCCHHHHHHHHHHHhhhHHH
Confidence 33333210 00000 015788999999999999998 4455677776666555544 555
Q ss_pred HHh--------cCccccCCCCCCeEEccCCCCceEEEecccccccCH
Q 002031 282 IYV--------DGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 320 (977)
Q Consensus 282 i~~--------~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 320 (977)
+|- -.|-|||+|.-||||.++ |.-.|.|+|++...+.
T Consensus 324 LH~eI~GTqgKPaIAHRDlKSKNILVKkn--~~C~IADLGLAv~h~~ 368 (513)
T KOG2052|consen 324 LHMEIVGTQGKPAIAHRDLKSKNILVKKN--GTCCIADLGLAVRHDS 368 (513)
T ss_pred HHHHHhcCCCCchhhccccccccEEEccC--CcEEEeeceeeEEecc
Confidence 553 469999999999999866 8999999999887654
|
|
| >KOG0576 consensus Mitogen-activated protein kinase kinase kinase kinase (MAP4K), germinal center kinase family [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=98.64 E-value=1.7e-08 Score=116.47 Aligned_cols=80 Identities=15% Similarity=0.255 Sum_probs=63.1
Q ss_pred cCCceEEeeccCCCCCCChHHHHhcCCCHHHHHHHHHHHH--HHHHHhcCccccCCCCCCeEEccCCCCceEEEeccccc
Q 002031 239 SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTK 316 (977)
Q Consensus 239 ~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~ 316 (977)
..+.+++||||.|.+|.|+.... ..+...+++...-+.. ++.+|..|=+|||+|-+||++++. |.++|.|||..+
T Consensus 84 ~dklwicMEycgggslQdiy~~T-gplselqiayvcRetl~gl~ylhs~gk~hRdiKGanilltd~--gDvklaDfgvsa 160 (829)
T KOG0576|consen 84 RDKLWICMEYCGGGSLQDIYHVT-GPLSELQIAYVCRETLQGLKYLHSQGKIHRDIKGANILLTDE--GDVKLADFGVSA 160 (829)
T ss_pred hcCcEEEEEecCCCcccceeeec-ccchhHHHHHHHhhhhccchhhhcCCcccccccccceeeccc--CceeecccCchh
Confidence 34568999999999999975432 2234455555555554 888999999999999999999966 899999999999
Q ss_pred ccCHH
Q 002031 317 KLSSS 321 (977)
Q Consensus 317 ~l~~~ 321 (977)
+++..
T Consensus 161 qitat 165 (829)
T KOG0576|consen 161 QITAT 165 (829)
T ss_pred hhhhh
Confidence 88754
|
|
| >KOG0604 consensus MAP kinase-activated protein kinase 2 [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=98.64 E-value=1.9e-08 Score=106.13 Aligned_cols=141 Identities=18% Similarity=0.188 Sum_probs=91.6
Q ss_pred cCccccccccccEEEEEEec-CCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCcH
Q 002031 121 FVETPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFN 199 (977)
Q Consensus 121 ~d~~piasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~ 199 (977)
++.+.||.|--|.|-.+..+ +|+..|+||++-.-+.+-+-|+ +|....
T Consensus 65 is~qvLG~GinGkV~~C~~k~T~ekfALKvL~Ds~KARrEVeL-------Hw~~s~------------------------ 113 (400)
T KOG0604|consen 65 ISWQVLGAGINGKVVQCVHKRTQEKFALKVLLDSPKARREVEL-------HWMASG------------------------ 113 (400)
T ss_pred ehhhhhccccCCceEEEEeccchhhhHHHHHhcCHHHHhHhhh-------hhhhcC------------------------
Confidence 45688999999999999874 8999999987532221111111 111000
Q ss_pred HHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeee---cCC--ceEEeeccCCCCCCChHHHHhc-CCCHHHHHHH
Q 002031 200 SEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ---SSE--TVLILEFMDGIRLNDCESLEAF-GVNKQKVVEE 273 (977)
Q Consensus 200 ~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~---~~~--~vLVmE~i~G~~L~~~~~~~~~-~~~~~~l~~~ 273 (977)
....|.|-.||. ..+ ..+|||.++|+.|-....-+.. .+..++.++.
T Consensus 114 ---------------------------h~~iV~IidVyeNs~~~rkcLLiVmE~meGGeLfsriq~~g~~afTErea~eI 166 (400)
T KOG0604|consen 114 ---------------------------HPHIVSIIDVYENSYQGRKCLLIVMECMEGGELFSRIQDRGDQAFTEREASEI 166 (400)
T ss_pred ---------------------------CCceEEeehhhhhhccCceeeEeeeecccchHHHHHHHHcccccchHHHHHHH
Confidence 112345555554 122 3579999999988654332222 2445555555
Q ss_pred HHHHH--HHHHHhcCccccCCCCCCeEEccC-CCCceEEEecccccccC
Q 002031 274 ITRAY--AHQIYVDGFFNGDPHPGNFLVSKD-PPHRPILLDFGLTKKLS 319 (977)
Q Consensus 274 l~~~~--l~~i~~~G~~H~D~hPgNIlv~~~-~~g~i~LiDFG~~~~l~ 319 (977)
+-++. +..+|..+|-|||+||+|+|+... ++.-++|.|||+++.-.
T Consensus 167 ~~qI~~Av~~lH~~nIAHRDlKpENLLyt~t~~na~lKLtDfGFAK~t~ 215 (400)
T KOG0604|consen 167 MKQIGLAVRYLHSMNIAHRDLKPENLLYTTTSPNAPLKLTDFGFAKETQ 215 (400)
T ss_pred HHHHHHHHHHHHhcchhhccCChhheeeecCCCCcceEecccccccccC
Confidence 54433 788999999999999999999754 23568999999998654
|
|
| >KOG2270 consensus Serine/threonine protein kinase involved in cell cycle control [Signal transduction mechanisms; Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=98.63 E-value=1.6e-07 Score=102.58 Aligned_cols=194 Identities=15% Similarity=0.182 Sum_probs=124.6
Q ss_pred cccccCccccccccccEEEEEEecCCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhccccc
Q 002031 117 MFMDFVETPLATASIAQVHRATLVDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKEL 196 (977)
Q Consensus 117 ~f~~~d~~piasaSigqV~~A~l~~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~El 196 (977)
++.+++ -.|..|--+-||.|+-.+|..+||||-+..|--.-.+|=.+ ..-.++... .-..+...++.-|.
T Consensus 144 ~i~~in-GCiSTGKEANVYHat~~dG~~~AIKIYKTSILvFKDRdRYV-~GEfRFRhg-yck~NPRKMVk~WA------- 213 (520)
T KOG2270|consen 144 VIVEIN-GCISTGKEANVYHATEEDGSEFAIKIYKTSILVFKDRDRYV-SGEFRFRHG-YCKHNPRKMVKTWA------- 213 (520)
T ss_pred eeeecc-cccccCccceeEeeecCCCceEEEEEEeeeEEEEechhhhc-cceeeeecc-cccCCcHHHHHHHH-------
Confidence 344554 57899999999999999999999999887663221111100 000000000 00123445666665
Q ss_pred CcHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeeecCCceEEeeccCCCCCCChHHHHhcCCCHHH---HHHH
Q 002031 197 DFNSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQSSETVLILEFMDGIRLNDCESLEAFGVNKQK---VVEE 273 (977)
Q Consensus 197 d~~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~---l~~~ 273 (977)
..|.+|+.|+.. .++.+|+++.-..+||||+|+.+... ....+....+...+ +...
T Consensus 214 --EKE~RNLkRl~~------------------aGIP~PePIlLk~hVLVM~FlGrdgw-~aPkLKd~~ls~~ka~~~Y~~ 272 (520)
T KOG2270|consen 214 --EKEMRNLKRLNN------------------AGIPCPEPILLKNHVLVMEFLGRDGW-AAPKLKDASLSTSKARELYQQ 272 (520)
T ss_pred --HHHHHHHHHHHh------------------cCCCCCCceeeecceEeeeeccCCCC-cCcccccccCChHHHHHHHHH
Confidence 358899999865 25788998888889999999953211 11112222333333 2333
Q ss_pred HHHHHHHHHHhcCccccCCCCCCeEEccCCCCceEEEecccccccCHHHHHHHHHHHHHHHcCCHHHHHHHHHHcCcc
Q 002031 274 ITRAYAHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSSSMKQALAKMFFAAAEGDHVALLSAFAEMGLR 351 (977)
Q Consensus 274 l~~~~l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~~~r~~~~~l~~a~~~~d~~~~~~~~~~~g~~ 351 (977)
++...-......++||+||.--|+|+- +|.+.+||-+.....+...-..|. ..|...+-..|.++|+.
T Consensus 273 ~v~~MR~lY~~c~LVHADLSEfN~Lyh---dG~lyiIDVSQSVE~DHP~aldFL-------RmDc~NVn~FF~r~gv~ 340 (520)
T KOG2270|consen 273 CVRIMRRLYQKCRLVHADLSEFNLLYH---DGKLYIIDVSQSVEHDHPHALDFL-------RMDCNNVNDFFRRLGVA 340 (520)
T ss_pred HHHHHHHHHHHhceeccchhhhhheEE---CCEEEEEEccccccCCChhHHHHH-------HHHHHHHHHHHHHcCCe
Confidence 333322233458999999999999996 389999999999888776655543 44677888899999985
|
|
| >KOG1027 consensus Serine/threonine protein kinase and endoribonuclease ERN1/IRE1, sensor of the unfolded protein response pathway [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=98.62 E-value=2.5e-08 Score=117.92 Aligned_cols=77 Identities=26% Similarity=0.347 Sum_probs=54.4
Q ss_pred ceEEeeccCCCCCCChHHHH-----hcC-CCHHHHHHHHHHHHHHHHHhcCccccCCCCCCeEEcc---CCCCceEEEec
Q 002031 242 TVLILEFMDGIRLNDCESLE-----AFG-VNKQKVVEEITRAYAHQIYVDGFFNGDPHPGNFLVSK---DPPHRPILLDF 312 (977)
Q Consensus 242 ~vLVmE~i~G~~L~~~~~~~-----~~~-~~~~~l~~~l~~~~l~~i~~~G~~H~D~hPgNIlv~~---~~~g~i~LiDF 312 (977)
.|++.|.|. .+|.|+.... ..+ ++...+...++.. +.++|..+++|||+||.||||.. ++..+++|.||
T Consensus 578 ~YIalELC~-~sL~dlie~~~~d~~~~~~i~~~~~l~q~~~G-laHLHsl~iVHRDLkPQNILI~~~~~~~~~ra~iSDf 655 (903)
T KOG1027|consen 578 LYIALELCA-CSLQDLIESSGLDVEMQSDIDPISVLSQIASG-LAHLHSLKIVHRDLKPQNILISVPSADGTLRAKISDF 655 (903)
T ss_pred EEEEehHhh-hhHHHHHhccccchhhcccccHHHHHHHHHHH-HHHHHhcccccccCCCceEEEEccCCCcceeEEeccc
Confidence 588999985 5777764431 001 2333333333332 77899999999999999999986 33457899999
Q ss_pred ccccccCH
Q 002031 313 GLTKKLSS 320 (977)
Q Consensus 313 G~~~~l~~ 320 (977)
|++++++.
T Consensus 656 glsKkl~~ 663 (903)
T KOG1027|consen 656 GLSKKLAG 663 (903)
T ss_pred ccccccCC
Confidence 99999965
|
|
| >KOG0690 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=98.61 E-value=3.6e-08 Score=104.80 Aligned_cols=144 Identities=17% Similarity=0.172 Sum_probs=89.7
Q ss_pred cccC-ccccccccccEEEEEEec-CCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhccccc
Q 002031 119 MDFV-ETPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKEL 196 (977)
Q Consensus 119 ~~~d-~~piasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~El 196 (977)
++|| -+.+|.|.||.|-.++-+ +|+.+||||++.++- +..| .+++.
T Consensus 168 ~dFdfLKvLGkGTFGKVIL~rEKat~k~YAiKIlkKevi--iakd-----EVAHT------------------------- 215 (516)
T KOG0690|consen 168 EDFDFLKVLGKGTFGKVILCREKATGKLYAIKILKKEVI--IAKD-----EVAHT------------------------- 215 (516)
T ss_pred chhhHHHHhcCCccceEEEEeecccCceeehhhhhhhhe--eehH-----Hhhhh-------------------------
Confidence 3454 378999999999999864 899999999876542 1111 01111
Q ss_pred CcHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCeEecee-ee-cCCceEEeeccCCCCCCChHHHHhcCCC--HHHHHH
Q 002031 197 DFNSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEV-IQ-SSETVLILEFMDGIRLNDCESLEAFGVN--KQKVVE 272 (977)
Q Consensus 197 d~~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v-~~-~~~~vLVmE~i~G~~L~~~~~~~~~~~~--~~~l~~ 272 (977)
..|-+.+...++-| +.--+. +. ..+.+.||||..|+.|--... +...++ +.+..-
T Consensus 216 --lTE~RVL~~~~HPF------------------Lt~LKYsFQt~drlCFVMeyanGGeLf~HLs-rer~FsE~RtRFYG 274 (516)
T KOG0690|consen 216 --LTENRVLQNCRHPF------------------LTSLKYSFQTQDRLCFVMEYANGGELFFHLS-RERVFSEDRTRFYG 274 (516)
T ss_pred --hhHHHHHHhccCcH------------------HHHhhhhhccCceEEEEEEEccCceEeeehh-hhhcccchhhhhhh
Confidence 11223333222211 000000 01 244578999999998863322 122233 333322
Q ss_pred HHHHHHHHHHHhcCccccCCCCCCeEEccCCCCceEEEecccccc
Q 002031 273 EITRAYAHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKK 317 (977)
Q Consensus 273 ~l~~~~l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~ 317 (977)
.-+-..+..+|..+|+-||+|-.|+|+++| |.|++.|||+|+.
T Consensus 275 aEIvsAL~YLHs~~ivYRDlKLENLlLDkD--GHIKitDFGLCKE 317 (516)
T KOG0690|consen 275 AEIVSALGYLHSRNIVYRDLKLENLLLDKD--GHIKITDFGLCKE 317 (516)
T ss_pred HHHHHHhhhhhhCCeeeeechhhhheeccC--CceEeeecccchh
Confidence 223334888999999999999999999977 9999999999974
|
|
| >KOG1152 consensus Signal transduction serine/threonine kinase with PAS/PAC sensor domain [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=98.60 E-value=1.2e-07 Score=107.95 Aligned_cols=150 Identities=20% Similarity=0.258 Sum_probs=85.5
Q ss_pred ccccccccccEEEEEEec-CCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCcHHH
Q 002031 123 ETPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSE 201 (977)
Q Consensus 123 ~~piasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~E 201 (977)
-+|+|+|.+|||..|+++ +...|+||.... +++..|. |.. .-++..+ .. |
T Consensus 566 lq~lG~GAyGkV~lai~K~n~~eVViK~I~K---eRIL~Dt-----------Wvr-DrkLGtV--------p~------E 616 (772)
T KOG1152|consen 566 LQPLGEGAYGKVNLAIHKENNYEVVIKMIFK---ERILVDT-----------WVR-DRKLGTV--------PS------E 616 (772)
T ss_pred eeeccccccceEEEeeecccceEEEeeehhh---hhhhhhh-----------hhc-ccccCcc--------ch------h
Confidence 379999999999999985 567899997643 2333222 211 0111111 11 2
Q ss_pred HHHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeee-cCCceEEeecc-CCCCCCChHHHHhcCCCHH--HHHHHHHHH
Q 002031 202 AENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFM-DGIRLNDCESLEAFGVNKQ--KVVEEITRA 277 (977)
Q Consensus 202 a~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLVmE~i-~G~~L~~~~~~~~~~~~~~--~l~~~l~~~ 277 (977)
.+-+..+..+-. ...+++-..++ ....+|+||-- +|+.|-++...+ ..++.. ++.-.-+.+
T Consensus 617 IqIla~l~~~sH--------------~NIlKlLdfFEddd~yyl~te~hg~gIDLFd~IE~k-p~m~E~eAk~IFkQV~a 681 (772)
T KOG1152|consen 617 IQILATLNKHSH--------------ENILKLLDFFEDDDYYYLETEVHGEGIDLFDFIEFK-PRMDEPEAKLIFKQVVA 681 (772)
T ss_pred HHHHHHhhhcCc--------------cchhhhhheeecCCeeEEEecCCCCCcchhhhhhcc-CccchHHHHHHHHHHHh
Confidence 222222221100 01122222222 33447888864 466665654432 122222 222223333
Q ss_pred HHHHHHhcCccccCCCCCCeEEccCCCCceEEEeccccccc
Q 002031 278 YAHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKL 318 (977)
Q Consensus 278 ~l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l 318 (977)
-.+.+|..||+|||+|-+|++|+.+ |-++|||||.+...
T Consensus 682 gi~hlh~~~ivhrdikdenvivd~~--g~~klidfgsaa~~ 720 (772)
T KOG1152|consen 682 GIKHLHDQGIVHRDIKDENVIVDSN--GFVKLIDFGSAAYT 720 (772)
T ss_pred ccccccccCceecccccccEEEecC--CeEEEeeccchhhh
Confidence 4778899999999999999999854 89999999987543
|
|
| >KOG4279 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=98.60 E-value=9.4e-08 Score=110.20 Aligned_cols=76 Identities=17% Similarity=0.137 Sum_probs=56.5
Q ss_pred eEEeeccCCCCCCChHHHHhcCC--CHHHHHHHHHHHH--HHHHHhcCccccCCCCCCeEEccCCCCceEEEeccccccc
Q 002031 243 VLILEFMDGIRLNDCESLEAFGV--NKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKL 318 (977)
Q Consensus 243 vLVmE~i~G~~L~~~~~~~~~~~--~~~~l~~~l~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l 318 (977)
-+-||-++|++|+++....-..+ +...+....-+++ ++.+|+..|||||||-.|+||+.- .|-+++.|||.++++
T Consensus 648 kIFMEqVPGGSLSsLLrskWGPlKDNEstm~fYtkQILeGLkYLHen~IVHRDIKGDNVLvNTy-SGvlKISDFGTsKRL 726 (1226)
T KOG4279|consen 648 KIFMEQVPGGSLSSLLRSKWGPLKDNESTMNFYTKQILEGLKYLHENKIVHRDIKGDNVLVNTY-SGVLKISDFGTSKRL 726 (1226)
T ss_pred EEEeecCCCCcHHHHHHhccCCCccchhHHHHHHHHHHHHhhhhhhcceeeccccCCcEEEeec-cceEEecccccchhh
Confidence 36899999999998865332222 2333333333333 778899999999999999999865 488999999999877
Q ss_pred C
Q 002031 319 S 319 (977)
Q Consensus 319 ~ 319 (977)
.
T Consensus 727 A 727 (1226)
T KOG4279|consen 727 A 727 (1226)
T ss_pred c
Confidence 3
|
|
| >KOG2345 consensus Serine/threonine protein kinase/TGF-beta stimulated factor [Transcription; Lipid transport and metabolism; Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=98.60 E-value=8e-08 Score=99.32 Aligned_cols=79 Identities=19% Similarity=0.226 Sum_probs=61.3
Q ss_pred cCCceEEeeccCCCCCCChHHHHh---cCCCHHHHHHHHHHHH--HHHHHhcC--ccccCCCCCCeEEccCCCCceEEEe
Q 002031 239 SSETVLILEFMDGIRLNDCESLEA---FGVNKQKVVEEITRAY--AHQIYVDG--FFNGDPHPGNFLVSKDPPHRPILLD 311 (977)
Q Consensus 239 ~~~~vLVmE~i~G~~L~~~~~~~~---~~~~~~~l~~~l~~~~--l~~i~~~G--~~H~D~hPgNIlv~~~~~g~i~LiD 311 (977)
+...+|+..|..-++|.+...... .-++..+++.....++ ++++|... +.|+|+||+||++.++ +.++|.|
T Consensus 95 ~~~~yll~Pyy~~Gsl~d~i~~~k~kg~~~sE~~iL~if~gic~gL~~lH~~~~~yAH~DiKP~NILls~~--~~~vl~D 172 (302)
T KOG2345|consen 95 KHEAYLLLPYYKRGSLLDEIERLKIKGNFVSEAQILWIFLGICRGLEALHEKEPPYAHRDIKPANILLSDS--GLPVLMD 172 (302)
T ss_pred ceeEEEEeehhccccHHHHHHHHhhcCCccCHHHHHHHHHHHHHHHHHHhccCCcccccCCCcceeEecCC--CceEEEe
Confidence 345689999987777766544322 2356677777776666 99999998 9999999999999864 8999999
Q ss_pred cccccccC
Q 002031 312 FGLTKKLS 319 (977)
Q Consensus 312 FG~~~~l~ 319 (977)
||.+...+
T Consensus 173 ~GS~~~a~ 180 (302)
T KOG2345|consen 173 LGSATQAP 180 (302)
T ss_pred ccCccccc
Confidence 99998764
|
|
| >KOG0033 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=98.59 E-value=4e-09 Score=108.19 Aligned_cols=141 Identities=20% Similarity=0.253 Sum_probs=83.8
Q ss_pred ccccccccEEEEEEe-cCCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCcHHHHH
Q 002031 125 PLATASIAQVHRATL-VDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEAE 203 (977)
Q Consensus 125 piasaSigqV~~A~l-~~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea~ 203 (977)
-||.|.|+.|||... .+|+..|+|+..-.. .-..|. + ++.+|++
T Consensus 18 ~igkG~FSvVrRc~~~~tg~~fa~kiin~~k--~~~~~~-----------------------e----------~l~rEar 62 (355)
T KOG0033|consen 18 ELGKGAFSVVRRCVHKTTGLEFAAKIINTKK--LSARDF-----------------------Q----------KLEREAR 62 (355)
T ss_pred HHccCchHHHHHHHhccchHHHHHHHhhhhh--hccccH-----------------------H----------HHHHHHH
Confidence 489999999999986 489999999653110 000000 0 2345655
Q ss_pred HHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeee-cCCceEEeeccCCCCCCChHHHHhcCCC---HHHHHHHHHHHHH
Q 002031 204 NTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAFGVN---KQKVVEEITRAYA 279 (977)
Q Consensus 204 n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLVmE~i~G~~L~~~~~~~~~~~~---~~~l~~~l~~~~l 279 (977)
-...+++ ...+..-+-+. .+-++||.|+++|..|-.-.. .+.-.+ .....+.++++ +
T Consensus 63 IC~~LqH-----------------P~IvrL~~ti~~~~~~ylvFe~m~G~dl~~eIV-~R~~ySEa~aSH~~rQiLea-l 123 (355)
T KOG0033|consen 63 ICRKLQH-----------------PNIVRLHDSIQEESFHYLVFDLVTGGELFEDIV-AREFYSEADASHCIQQILEA-L 123 (355)
T ss_pred HHHhcCC-----------------CcEeehhhhhcccceeEEEEecccchHHHHHHH-HHHHHHHHHHHHHHHHHHHH-H
Confidence 4444332 11122222222 456799999999987642211 111111 11122222222 4
Q ss_pred HHHHhcCccccCCCCCCeEEccCCC-CceEEEecccccccC
Q 002031 280 HQIYVDGFFNGDPHPGNFLVSKDPP-HRPILLDFGLTKKLS 319 (977)
Q Consensus 280 ~~i~~~G~~H~D~hPgNIlv~~~~~-g~i~LiDFG~~~~l~ 319 (977)
...|..||+|||+||.|+++....+ .-++|.|||++..++
T Consensus 124 ~yCH~n~IvHRDvkP~nllLASK~~~A~vKL~~FGvAi~l~ 164 (355)
T KOG0033|consen 124 AYCHSNGIVHRDLKPENLLLASKAKGAAVKLADFGLAIEVN 164 (355)
T ss_pred HHHHhcCceeccCChhheeeeeccCCCceeecccceEEEeC
Confidence 5567799999999999999975433 358999999999987
|
|
| >KOG0666 consensus Cyclin C-dependent kinase CDK8 [Transcription] | Back alignment and domain information |
|---|
Probab=98.56 E-value=8.1e-08 Score=101.88 Aligned_cols=78 Identities=19% Similarity=0.281 Sum_probs=51.0
Q ss_pred ceEEeeccCCCCCCChHHHH----hcCCCHHHHHHHHHHHH--HHHHHhcCccccCCCCCCeEEccC--CCCceEEEecc
Q 002031 242 TVLILEFMDGIRLNDCESLE----AFGVNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKD--PPHRPILLDFG 313 (977)
Q Consensus 242 ~vLVmE~i~G~~L~~~~~~~----~~~~~~~~l~~~l~~~~--l~~i~~~G~~H~D~hPgNIlv~~~--~~g~i~LiDFG 313 (977)
-+|+.||.|- .|..+.... ...+.+.-+-..+.+++ +..+|..=++|||+||.||||..+ +.|+++|.|||
T Consensus 103 v~l~fdYAEh-DL~~II~fHr~~~~~~lp~~mvKsilwQil~Gv~YLH~NWvlHRDLKPaNIlvmgdgperG~VKIaDlG 181 (438)
T KOG0666|consen 103 VWLLFDYAEH-DLWHIIKFHRASKAKQLPRSMVKSILWQILDGVHYLHSNWVLHRDLKPANILVMGDGPERGRVKIADLG 181 (438)
T ss_pred EEEEehhhhh-hHHHHHHHhccchhccCCHHHHHHHHHHHHhhhHHHhhhheeeccCCcceEEEeccCCccCeeEeeccc
Confidence 4689999972 222222211 11233333333444444 666788889999999999999854 24899999999
Q ss_pred cccccCH
Q 002031 314 LTKKLSS 320 (977)
Q Consensus 314 ~~~~l~~ 320 (977)
+++.+..
T Consensus 182 laR~~~~ 188 (438)
T KOG0666|consen 182 LARLFNN 188 (438)
T ss_pred HHHHhhc
Confidence 9887643
|
|
| >KOG1025 consensus Epidermal growth factor receptor EGFR and related tyrosine kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=98.54 E-value=7.4e-08 Score=113.25 Aligned_cols=84 Identities=20% Similarity=0.162 Sum_probs=71.1
Q ss_pred cCCceEEeeccCCCCCCChHHHHhcCCCHHHHHHHHHHHH--HHHHHhcCccccCCCCCCeEEccCCCCceEEEeccccc
Q 002031 239 SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTK 316 (977)
Q Consensus 239 ~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~ 316 (977)
.+.--||++|++++.|.|+....+..+..+.++....++. ++.|++++++||||-..||||..- ..+++.|||+++
T Consensus 769 ~s~~qlvtq~mP~G~LlDyvr~hr~~igsq~lLnw~~QIAkgM~YLe~qrlVHrdLaaRNVLVksP--~hvkitdfgla~ 846 (1177)
T KOG1025|consen 769 LSTLQLVTQLMPLGCLLDYVREHRDNIGSQDLLNWCYQIAKGMKYLEEQRLVHRDLAARNVLVKSP--NHVKITDFGLAK 846 (1177)
T ss_pred cchHHHHHHhcccchHHHHHHHhhccccHHHHHHHHHHHHHHHHHHHhcchhhhhhhhhheeecCC--CeEEEEecchhh
Confidence 3446689999999999999887777777888888888776 888999999999999999999853 689999999999
Q ss_pred ccCHHHHH
Q 002031 317 KLSSSMKQ 324 (977)
Q Consensus 317 ~l~~~~r~ 324 (977)
-+..+..+
T Consensus 847 ll~~d~~e 854 (1177)
T KOG1025|consen 847 LLAPDEKE 854 (1177)
T ss_pred ccCccccc
Confidence 88765544
|
|
| >KOG1151 consensus Tousled-like protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=98.52 E-value=2.1e-07 Score=102.50 Aligned_cols=83 Identities=18% Similarity=0.231 Sum_probs=53.5
Q ss_pred cCCceEEeeccCCCCCCChHHHHhcCCCHHHHHHHHHHHH--HHHHH--hcCccccCCCCCCeEEcc-CCCCceEEEecc
Q 002031 239 SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--AHQIY--VDGFFNGDPHPGNFLVSK-DPPHRPILLDFG 313 (977)
Q Consensus 239 ~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~--l~~i~--~~G~~H~D~hPgNIlv~~-~~~g~i~LiDFG 313 (977)
+..-+-|+|||+|-.|+-+.... .-++.++.-.++.+++ +..+- ..-|+|-|+||||||+-. ...|.|+|.|||
T Consensus 540 tdsFCTVLEYceGNDLDFYLKQh-klmSEKEARSIiMQiVnAL~YLNEikpPIIHYDLKPgNILLv~GtacGeIKITDFG 618 (775)
T KOG1151|consen 540 TDSFCTVLEYCEGNDLDFYLKQH-KLMSEKEARSIIMQIVNALKYLNEIKPPIIHYDLKPGNILLVNGTACGEIKITDFG 618 (775)
T ss_pred cccceeeeeecCCCchhHHHHhh-hhhhHHHHHHHHHHHHHHHHHHhccCCCeeeeccCCccEEEecCcccceeEeeecc
Confidence 34457899999999987664321 1122233222233322 33332 357999999999998753 224789999999
Q ss_pred cccccCHHH
Q 002031 314 LTKKLSSSM 322 (977)
Q Consensus 314 ~~~~l~~~~ 322 (977)
+.+.++++.
T Consensus 619 LSKIMdddS 627 (775)
T KOG1151|consen 619 LSKIMDDDS 627 (775)
T ss_pred hhhhccCCc
Confidence 998876643
|
|
| >PF06293 Kdo: Lipopolysaccharide kinase (Kdo/WaaP) family; InterPro: IPR010440 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases | Back alignment and domain information |
|---|
Probab=98.51 E-value=2.4e-07 Score=97.53 Aligned_cols=104 Identities=21% Similarity=0.293 Sum_probs=72.3
Q ss_pred CcHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeee--c------CCceEEeeccCCC-CCCChHHHHh--cCC
Q 002031 197 DFNSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ--S------SETVLILEFMDGI-RLNDCESLEA--FGV 265 (977)
Q Consensus 197 d~~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~--~------~~~vLVmE~i~G~-~L~~~~~~~~--~~~ 265 (977)
...+|.+++.++.+ .++.+|+++. . .+.+|+||+++|. +|.++..... ...
T Consensus 57 ra~~E~~~~~~L~~------------------~Gi~tP~pva~~~~r~~~~~~s~lite~l~~~~~L~~~~~~~~~~~~~ 118 (206)
T PF06293_consen 57 RAKREWRNLQRLRE------------------AGIPTPEPVAYGERRKGGGYRSYLITEALPGAQDLRDLLQQWEQLDPS 118 (206)
T ss_pred HHHHHHHHHHHHHH------------------cCCCCCcEEEEEEEcCCCceeEEEEEEeCCCcccHHHHHHhhcccchh
Confidence 46678889988875 2577888764 1 2348999999984 6766533200 011
Q ss_pred CHHHHHHHHHHHHHHHHHhcCccccCCCCCCeEEccCC-CCceEEEecccccccC
Q 002031 266 NKQKVVEEITRAYAHQIYVDGFFNGDPHPGNFLVSKDP-PHRPILLDFGLTKKLS 319 (977)
Q Consensus 266 ~~~~l~~~l~~~~l~~i~~~G~~H~D~hPgNIlv~~~~-~g~i~LiDFG~~~~l~ 319 (977)
....+...+.+ ++..+|..|++|+|++|+||||+.++ ..++.||||+-+..-.
T Consensus 119 ~~~~ll~~l~~-~i~~lH~~gi~H~Dl~~~NILv~~~~~~~~~~lIDld~~~~~~ 172 (206)
T PF06293_consen 119 QRRELLRALAR-LIAKLHDAGIYHGDLNPSNILVDPDDGQYRFYLIDLDRMRFRP 172 (206)
T ss_pred hHHHHHHHHHH-HHHHHHHCcCCCCCCCcccEEEeCCCCceeEEEEcchhceeCC
Confidence 23344444444 37789999999999999999999662 2379999999887655
|
Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents lipopolysaccharide kinases which are related to protein kinases IPR000719 from INTERPRO. This family includes waaP (rfaP) gene product is required for the addition of phosphate to O-4 of the first heptose residue of the lipopolysaccharide (LPS) inner core region. It has previously been shown that WaaP is necessary for resistance to hydrophobic and polycationic antimicrobials in E. coli and that it is required for virulence in invasive strains of Salmonella enterica [].; GO: 0005524 ATP binding, 0016773 phosphotransferase activity, alcohol group as acceptor, 0009103 lipopolysaccharide biosynthetic process, 0016020 membrane |
| >PRK10593 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=98.50 E-value=1.1e-06 Score=97.76 Aligned_cols=93 Identities=15% Similarity=0.172 Sum_probs=65.7
Q ss_pred HHHHHHHHHHhCCChhhcccccCccccccccccEEEEEEecCCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCC
Q 002031 100 QEVSQTIEREFGESMGGMFMDFVETPLATASIAQVHRATLVDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQY 179 (977)
Q Consensus 100 ~~v~~~l~~elg~~~~~~f~~~d~~piasaSigqV~~A~l~~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~ 179 (977)
+.+++.+.+.+|..+.+ .++|+.|.+++||+....+| .++||+.+......
T Consensus 2 ~~~~~~~~~~~~~~~~~------~~~i~~G~~~~vy~~~~~~~-~~~~k~~~~~~~~~---------------------- 52 (297)
T PRK10593 2 EQLRAELSHLLGEKLSR------VECISEQPYAALWALYDSQG-NPMPLMARSFSTPG---------------------- 52 (297)
T ss_pred hHHHHHHHHHhchhhhe------eeecCCccceeEEEEEcCCC-CEEEEEecccccch----------------------
Confidence 45667777777764443 37999999999999987555 57889864321110
Q ss_pred CCchhHHHHhhhcccccCcHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeee-c------CCceEEeeccCCC
Q 002031 180 DFNPIIDEWCKEAPKELDFNSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-S------SETVLILEFMDGI 252 (977)
Q Consensus 180 ~~~~~~~e~~~~l~~Eld~~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~------~~~vLVmE~i~G~ 252 (977)
.|..|+++++.+++. ..+.||+|+. + +..+||||+++|.
T Consensus 53 -----------------~~~~Ea~~L~~L~~~-----------------~~vpVP~V~~~~~~~~~~g~~~LVmE~i~G~ 98 (297)
T PRK10593 53 -----------------VAQQEAWKLSMLARS-----------------GTVRMPTVYGVMTHEQSPGPDVLLLERLRGV 98 (297)
T ss_pred -----------------HHHHHHHHHHHHccC-----------------CCCCcCcEEEEeccCCcCCCeEEEEeccCCE
Confidence 245788888887541 2478999995 2 4479999999998
Q ss_pred CCC
Q 002031 253 RLN 255 (977)
Q Consensus 253 ~L~ 255 (977)
++.
T Consensus 99 ~~~ 101 (297)
T PRK10593 99 SVE 101 (297)
T ss_pred ecC
Confidence 773
|
|
| >KOG0695 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=98.46 E-value=1.8e-07 Score=99.74 Aligned_cols=76 Identities=16% Similarity=0.197 Sum_probs=55.4
Q ss_pred cCCceEEeeccCCCCCCChHHHHhcCCCH--HHHHHHHHHHHHHHHHhcCccccCCCCCCeEEccCCCCceEEEeccccc
Q 002031 239 SSETVLILEFMDGIRLNDCESLEAFGVNK--QKVVEEITRAYAHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTK 316 (977)
Q Consensus 239 ~~~~vLVmE~i~G~~L~~~~~~~~~~~~~--~~l~~~l~~~~l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~ 316 (977)
.++.+.|.||++|+.|--... +...+.. .++...-+-+.+..+|+.||+-||+|-.|+|++.+ |.|+|.|+||++
T Consensus 323 esrlffvieyv~ggdlmfhmq-rqrklpeeharfys~ei~lal~flh~rgiiyrdlkldnvlldae--ghikltdygmck 399 (593)
T KOG0695|consen 323 ESRLFFVIEYVNGGDLMFHMQ-RQRKLPEEHARFYSAEICLALNFLHERGIIYRDLKLDNVLLDAE--GHIKLTDYGMCK 399 (593)
T ss_pred cceEEEEEEEecCcceeeehh-hhhcCcHHHhhhhhHHHHHHHHHHhhcCeeeeeccccceEEccC--Cceeecccchhh
Confidence 466789999999998863321 1112221 22222333345888999999999999999999966 999999999997
Q ss_pred c
Q 002031 317 K 317 (977)
Q Consensus 317 ~ 317 (977)
.
T Consensus 400 e 400 (593)
T KOG0695|consen 400 E 400 (593)
T ss_pred c
Confidence 5
|
|
| >KOG1345 consensus Serine/threonine kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=98.40 E-value=1.1e-06 Score=91.98 Aligned_cols=77 Identities=27% Similarity=0.345 Sum_probs=55.8
Q ss_pred CceEEeeccCCCCCCChHHHHhcCCC---HHHHHHHHHHHHHHHHHhcCccccCCCCCCeEEccCCCCceEEEecccccc
Q 002031 241 ETVLILEFMDGIRLNDCESLEAFGVN---KQKVVEEITRAYAHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKK 317 (977)
Q Consensus 241 ~~vLVmE~i~G~~L~~~~~~~~~~~~---~~~l~~~l~~~~l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~ 317 (977)
-.|.||||++-++|..-. ...|+. .+++.+.+..+ +..+|..++||||+|..||||=....-+|+|+|||....
T Consensus 96 ~YvF~qE~aP~gdL~snv--~~~GigE~~~K~v~~ql~SA-i~fMHsknlVHRdlK~eNiLif~~df~rvKlcDFG~t~k 172 (378)
T KOG1345|consen 96 AYVFVQEFAPRGDLRSNV--EAAGIGEANTKKVFAQLLSA-IEFMHSKNLVHRDLKAENILIFDADFYRVKLCDFGLTRK 172 (378)
T ss_pred eEEEeeccCccchhhhhc--CcccccHHHHHHHHHHHHHH-HHHhhccchhhcccccceEEEecCCccEEEeeecccccc
Confidence 347899999987776542 233433 23444444443 778899999999999999998543345899999999887
Q ss_pred cCH
Q 002031 318 LSS 320 (977)
Q Consensus 318 l~~ 320 (977)
...
T Consensus 173 ~g~ 175 (378)
T KOG1345|consen 173 VGT 175 (378)
T ss_pred cCc
Confidence 654
|
|
| >KOG1026 consensus Nerve growth factor receptor TRKA and related tyrosine kinases [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport] | Back alignment and domain information |
|---|
Probab=98.40 E-value=2.7e-07 Score=110.25 Aligned_cols=140 Identities=21% Similarity=0.251 Sum_probs=99.5
Q ss_pred cccccccccEEEEEEec------CCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccC
Q 002031 124 TPLATASIAQVHRATLV------DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELD 197 (977)
Q Consensus 124 ~piasaSigqV~~A~l~------~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld 197 (977)
+-+|.|.||.||+|+.. +-+-||||-++.....+ ...|
T Consensus 492 ~eLGegaFGkVf~a~~~~l~p~~~~~lVAVK~LKd~a~~~------------------------------------~~~d 535 (774)
T KOG1026|consen 492 EELGEGAFGKVFLAEAYGLLPGQDEQLVAVKALKDKAENQ------------------------------------ARQD 535 (774)
T ss_pred hhhcCchhhhhhhhhccCCCCCccceehhHhhhcccccHH------------------------------------HHHH
Confidence 56899999999999863 34669999765433322 2247
Q ss_pred cHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeee-cCCceEEeeccCCCCCCChHHHHhc-------C-----
Q 002031 198 FNSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAF-------G----- 264 (977)
Q Consensus 198 ~~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLVmE~i~G~~L~~~~~~~~~-------~----- 264 (977)
|++||+-+..|.| ...|++--|.. ....++|.||+.-++|.++...... +
T Consensus 536 F~REaeLla~l~H-----------------~nIVrLlGVC~~~~P~~MvFEYm~~GDL~eFLra~sP~a~~~~~g~~~~~ 598 (774)
T KOG1026|consen 536 FRREAELLAELQH-----------------PNIVRLLGVCREGDPLCMVFEYMDHGDLHEFLRARSPKADKLASGQDTPP 598 (774)
T ss_pred HHHHHHHHHhccC-----------------CCeEEEEEEEccCCeeEEEEEecccccHHHHHHhhCCccccccCCCCCCC
Confidence 8889988777754 11233322322 3556899999999999887543221 1
Q ss_pred -CCHHHHHHHHHHHH--HHHHHhcCccccCCCCCCeEEccCCCCceEEEeccccccc
Q 002031 265 -VNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKL 318 (977)
Q Consensus 265 -~~~~~l~~~l~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l 318 (977)
++..+++....++. +..|-.+-||||||--.|.||.+. ..|+|.|||+++.+
T Consensus 599 ~L~~~q~L~iA~QIAaGM~YLs~~~FVHRDLATRNCLVge~--l~VKIsDfGLsRdi 653 (774)
T KOG1026|consen 599 PLSTSQFLHIATQIAAGMEYLSSHHFVHRDLATRNCLVGEN--LVVKISDFGLSRDI 653 (774)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHhCcccccchhhhhceeccc--eEEEecccccchhh
Confidence 34556666666655 677778999999999999999855 78999999999865
|
|
| >PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=98.39 E-value=1e-06 Score=114.25 Aligned_cols=129 Identities=15% Similarity=0.156 Sum_probs=78.7
Q ss_pred ccccccccccEEEEEEe-cCCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCcHHH
Q 002031 123 ETPLATASIAQVHRATL-VDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSE 201 (977)
Q Consensus 123 ~~piasaSigqV~~A~l-~~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~E 201 (977)
.+.||.|++|.||+|+. .+|+.||||..+.... ....|
T Consensus 695 ~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~-----------------------------------------~~~~~ 733 (968)
T PLN00113 695 ENVISRGKKGASYKGKSIKNGMQFVVKEINDVNS-----------------------------------------IPSSE 733 (968)
T ss_pred ccEEccCCCeeEEEEEECCCCcEEEEEEccCCcc-----------------------------------------ccHHH
Confidence 35799999999999997 5899999997542110 00112
Q ss_pred HHHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeee-cCCceEEeeccCCCCCCChHHHHhcCCCHHHHHHHHHHHH--
Q 002031 202 AENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY-- 278 (977)
Q Consensus 202 a~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~-- 278 (977)
.+.+.+++| ..-+.+-.++. ....++||||++|.+|.++.. ..+.......+.++.
T Consensus 734 ~~~l~~l~H-----------------pnIv~~~~~~~~~~~~~lv~Ey~~~g~L~~~l~----~l~~~~~~~i~~~ia~~ 792 (968)
T PLN00113 734 IADMGKLQH-----------------PNIVKLIGLCRSEKGAYLIHEYIEGKNLSEVLR----NLSWERRRKIAIGIAKA 792 (968)
T ss_pred HHHHhhCCC-----------------CCcceEEEEEEcCCCCEEEEeCCCCCcHHHHHh----cCCHHHHHHHHHHHHHH
Confidence 222222211 11122222222 455789999999999987742 233333333333332
Q ss_pred HHHHH---hcCccccCCCCCCeEEccCCCCceEEEeccccc
Q 002031 279 AHQIY---VDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTK 316 (977)
Q Consensus 279 l~~i~---~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~ 316 (977)
+..+| ..+++|||+||.||+++.+ +..++ +||..+
T Consensus 793 L~yLH~~~~~~iiH~dlkp~Nil~~~~--~~~~~-~~~~~~ 830 (968)
T PLN00113 793 LRFLHCRCSPAVVVGNLSPEKIIIDGK--DEPHL-RLSLPG 830 (968)
T ss_pred HHHhccCCCCCeecCCCCHHhEEECCC--CceEE-Eecccc
Confidence 66777 5699999999999999865 44443 355543
|
|
| >TIGR02172 Fb_sc_TIGR02172 Fibrobacter succinogenes paralogous family TIGR02172 | Back alignment and domain information |
|---|
Probab=98.38 E-value=2.2e-06 Score=91.54 Aligned_cols=32 Identities=22% Similarity=0.264 Sum_probs=26.7
Q ss_pred cCccccCCCCCCeEEccCCCCceEEEecccccccC
Q 002031 285 DGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 319 (977)
Q Consensus 285 ~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~ 319 (977)
..++|+|+||+||+++++ + +.+|||+.++.=+
T Consensus 153 ~~~~HgD~~~~Nii~~~~--~-~~iIDwe~a~~Gd 184 (226)
T TIGR02172 153 STCLHGDFQIGNLITSGK--G-TYWIDLGDFGYGN 184 (226)
T ss_pred CceEecCCCCCcEEEcCC--C-cEEEechhcCcCC
Confidence 467899999999999854 5 9999999887543
|
This model describes a paralogous family of five proteins, likely to be enzymes, in the rumen bacterium Fibrobacter succinogenes S85. Members show homology to proteins described by PFAM model pfam01636, a phosphotransferase enzyme family associated with resistance to aminoglycoside antibiotics. However, members of this family score below the current trusted and noise cutoffs for pfam01636. |
| >KOG2268 consensus Serine/threonine protein kinase [Signal transduction mechanisms; General function prediction only] | Back alignment and domain information |
|---|
Probab=98.32 E-value=1.1e-06 Score=94.65 Aligned_cols=181 Identities=14% Similarity=0.236 Sum_probs=120.8
Q ss_pred cccccccccEEEEEEecCCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCcHHHHH
Q 002031 124 TPLATASIAQVHRATLVDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEAE 203 (977)
Q Consensus 124 ~piasaSigqV~~A~l~~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea~ 203 (977)
+-||-|--+-||.+...+|++.++|+-|-|-.. ++.++. -...+...-...++ -...+.-.+|..
T Consensus 98 nqIGVGKESDIY~v~d~~G~~~~lK~HRLGRtS-----FR~Vk~---kRDY~r~r~~~sWl-------yLSRlaa~kEfa 162 (465)
T KOG2268|consen 98 NQIGVGKESDIYVVADEEGNPLILKLHRLGRTS-----FRNVKN---KRDYLRKRKSGSWL-------YLSRLAATKEFA 162 (465)
T ss_pred cccccccccceEEEecCCCCchhHHHHhhhhhh-----HHHhhh---hhhhHhcCCccchh-------hhHHHHHHHHHH
Confidence 458889999999999999999999987654221 111111 00000000001111 112233455666
Q ss_pred HHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeeecCCceEEeeccCCCCCCChHHHHhcCCCHHHHHHHHHHHHHHHHH
Q 002031 204 NTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQSSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAYAHQIY 283 (977)
Q Consensus 204 n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~l~~i~ 283 (977)
-++.|.+ ..+.||+++.+++++.|||+++|.+|..+.. -.++..+...++.++. -+-
T Consensus 163 fmkaL~e------------------~gfpVPkpiD~~RH~Vvmelv~g~Pl~~v~~----v~d~~~ly~~lm~~Iv-~la 219 (465)
T KOG2268|consen 163 FMKALYE------------------RGFPVPKPIDHNRHCVVMELVDGYPLRQVRH----VEDPPTLYDDLMGLIV-RLA 219 (465)
T ss_pred HHHHHHH------------------cCCCCCCcccccceeeHHHhhcccceeeeee----cCChHHHHHHHHHHHH-HHH
Confidence 6666654 2578999999999999999999999987633 2356667766666543 556
Q ss_pred hcCccccCCCCCCeEEccCCCCceEEEecccccccCHHHHHHHHHHHHHHHcCCHHHHHHHHH-HcCcc
Q 002031 284 VDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSSSMKQALAKMFFAAAEGDHVALLSAFA-EMGLR 351 (977)
Q Consensus 284 ~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~~~r~~~~~l~~a~~~~d~~~~~~~~~-~~g~~ 351 (977)
.+|+||||-.--||||+++ ++|++|||-.+...+.+.-..| ..+|.+=+...|. +.|..
T Consensus 220 ~~GlIHgDFNEFNimv~dd--~~i~vIDFPQmvS~sh~nA~~Y-------FdRDv~Ci~~fFrKkf~YE 279 (465)
T KOG2268|consen 220 NHGLIHGDFNEFNIMVKDD--DKIVVIDFPQMVSTSHPNAEYY-------FDRDVECIRAFFRKKFGYE 279 (465)
T ss_pred HcCceecccchheeEEecC--CCEEEeechHhhccCCCcccee-------ecccHHHHHHHHHHhcCCC
Confidence 8999999999999999965 8899999999888876654443 3566666666654 34554
|
|
| >KOG4257 consensus Focal adhesion tyrosine kinase FAK, contains FERM domain [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=98.31 E-value=1.1e-06 Score=100.82 Aligned_cols=141 Identities=18% Similarity=0.157 Sum_probs=93.6
Q ss_pred cccccccccEEEEEEec---CCC--EEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCc
Q 002031 124 TPLATASIAQVHRATLV---DGR--QVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDF 198 (977)
Q Consensus 124 ~piasaSigqV~~A~l~---~G~--~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~ 198 (977)
+.||.|-||-||+|+.. .|+ -||||.=+.+..-. . --.|
T Consensus 395 r~iG~GqFGdVy~gvYt~~~kge~iaVAvKtCK~d~t~d-------------------------~-----------tekf 438 (974)
T KOG4257|consen 395 RLIGEGQFGDVYKGVYTDPEKGERIAVAVKTCKTDCTPD-------------------------D-----------TEKF 438 (974)
T ss_pred HhhcCCcccceeeeEecccccCcceeeeeehhccCCChh-------------------------h-----------HHHH
Confidence 67999999999999963 344 37888644322100 0 0036
Q ss_pred HHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeee---cCCceEEeeccCCCCCCChHHHHhcCCCHHHHHHHHH
Q 002031 199 NSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ---SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEIT 275 (977)
Q Consensus 199 ~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~---~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~ 275 (977)
..||--++.|.+ .+|-+.+. ...-+||||..+=+.|..+...+...++...+.....
T Consensus 439 lqEa~iMrnfdH--------------------phIikLIGv~~e~P~WivmEL~~~GELr~yLq~nk~sL~l~tL~ly~~ 498 (974)
T KOG4257|consen 439 LQEASIMRNFDH--------------------PHIIKLIGVCVEQPMWIVMELAPLGELREYLQQNKDSLPLRTLTLYCY 498 (974)
T ss_pred HHHHHHHHhCCC--------------------cchhheeeeeeccceeEEEecccchhHHHHHHhccccchHHHHHHHHH
Confidence 678766665543 22333332 3445899999987777777554444444443333333
Q ss_pred HHH--HHHHHhcCccccCCCCCCeEEccCCCCceEEEecccccccCHHH
Q 002031 276 RAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSSSM 322 (977)
Q Consensus 276 ~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~~~ 322 (977)
++. +..++...||||||-..||||... .-++|.|||+.+.++++.
T Consensus 499 Qi~talaYLeSkrfVHRDIAaRNiLVsSp--~CVKLaDFGLSR~~ed~~ 545 (974)
T KOG4257|consen 499 QICTALAYLESKRFVHRDIAARNILVSSP--QCVKLADFGLSRYLEDDA 545 (974)
T ss_pred HHHHHHHHHHhhchhhhhhhhhheeecCc--ceeeecccchhhhccccc
Confidence 332 667788999999999999999854 679999999999887654
|
|
| >KOG0665 consensus Jun-N-terminal kinase (JNK) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=98.30 E-value=5.7e-07 Score=96.27 Aligned_cols=76 Identities=22% Similarity=0.413 Sum_probs=58.4
Q ss_pred CCceEEeeccCCCCCCChHHHHhcCCCHHHHHHHHHHHH--HHHHHhcCccccCCCCCCeEEccCCCCceEEEecccccc
Q 002031 240 SETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKK 317 (977)
Q Consensus 240 ~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~ 317 (977)
.+-++|||++++ +|..... ...|-+.+...+.+.+ ++.+|..||+|||+||.||+|..+ ..++++|||.+..
T Consensus 94 ~e~y~v~e~m~~-nl~~vi~---~elDH~tis~i~yq~~~~ik~lhs~~IihRdLkPsnivv~~~--~~lKi~dfg~ar~ 167 (369)
T KOG0665|consen 94 QEVYLVMELMDA-NLCQVIL---MELDHETISYILYQMLCGIKHLHSAGIIHRDLKPSNIVVNSD--CTLKILDFGLART 167 (369)
T ss_pred HhHHHHHHhhhh-HHHHHHH---HhcchHHHHHHHHHHHHHHHHHHhcceeecccCcccceecch--hheeeccchhhcc
Confidence 344799999974 4444433 3345566666666654 888999999999999999999866 8899999999987
Q ss_pred cCHH
Q 002031 318 LSSS 321 (977)
Q Consensus 318 l~~~ 321 (977)
-...
T Consensus 168 e~~~ 171 (369)
T KOG0665|consen 168 EDTD 171 (369)
T ss_pred cCcc
Confidence 6655
|
|
| >KOG0671 consensus LAMMER dual specificity kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=98.28 E-value=2.3e-06 Score=93.71 Aligned_cols=103 Identities=11% Similarity=0.093 Sum_probs=64.0
Q ss_pred cCCceEEeeccCCCCCCChHHHH-hcCCCH---HHHHHHHHHHHHHHHHhcCccccCCCCCCeEEccCC-----------
Q 002031 239 SSETVLILEFMDGIRLNDCESLE-AFGVNK---QKVVEEITRAYAHQIYVDGFFNGDPHPGNFLVSKDP----------- 303 (977)
Q Consensus 239 ~~~~vLVmE~i~G~~L~~~~~~~-~~~~~~---~~l~~~l~~~~l~~i~~~G~~H~D~hPgNIlv~~~~----------- 303 (977)
.+.-++|.|.+ |.++.|..... -..+.. +.++..++++ +..+|..+++|-|+||+|||+....
T Consensus 163 rghiCivfell-G~S~~dFlk~N~y~~fpi~~ir~m~~QL~~s-v~fLh~~kl~HTDLKPENILfvss~~~~~~~~k~~~ 240 (415)
T KOG0671|consen 163 RGHICIVFELL-GLSTFDFLKENNYIPFPIDHIRHMGYQLLES-VAFLHDLKLTHTDLKPENILFVSSEYFKTYNPKKKV 240 (415)
T ss_pred cCceEEEEecc-ChhHHHHhccCCccccchHHHHHHHHHHHHH-HHHHHhcceeecCCChheEEEeccceEEEeccCCcc
Confidence 45567899987 76776663311 111223 3344444444 6678999999999999999985321
Q ss_pred -------CCceEEEecccccccCHHHHHHHHHHHHHHH-cCCHHHHHHHHHHcCccc
Q 002031 304 -------PHRPILLDFGLTKKLSSSMKQALAKMFFAAA-EGDHVALLSAFAEMGLRL 352 (977)
Q Consensus 304 -------~g~i~LiDFG~~~~l~~~~r~~~~~l~~a~~-~~d~~~~~~~~~~~g~~~ 352 (977)
.-.|++||||.+..-.+.. ..++ .+.| .+-+.+..+|...
T Consensus 241 ~~~r~~ks~~I~vIDFGsAtf~~e~h--------s~iVsTRHY-RAPEViLgLGwS~ 288 (415)
T KOG0671|consen 241 CFIRPLKSTAIKVIDFGSATFDHEHH--------STIVSTRHY-RAPEVILGLGWSQ 288 (415)
T ss_pred ceeccCCCcceEEEecCCcceeccCc--------ceeeecccc-CCchheeccCcCC
Confidence 1358999999987654433 1222 3333 2556677788753
|
|
| >KOG0614 consensus cGMP-dependent protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=98.26 E-value=7.4e-07 Score=100.09 Aligned_cols=76 Identities=21% Similarity=0.254 Sum_probs=56.7
Q ss_pred ceEEeeccCCCCCCChHHHHhcC-CC--HHHHHHHHHHHHHHHHHhcCccccCCCCCCeEEccCCCCceEEEeccccccc
Q 002031 242 TVLILEFMDGIRLNDCESLEAFG-VN--KQKVVEEITRAYAHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKL 318 (977)
Q Consensus 242 ~vLVmE~i~G~~L~~~~~~~~~~-~~--~~~l~~~l~~~~l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l 318 (977)
-|+.||-|-|+.|..+.. ..| ++ ..++.-..+--.++.+|++||+.||+||+|+|++.+ |-++|.|||+++.+
T Consensus 495 vYmLmEaClGGElWTiLr--dRg~Fdd~tarF~~acv~EAfeYLH~k~iIYRDLKPENllLd~~--Gy~KLVDFGFAKki 570 (732)
T KOG0614|consen 495 VYMLMEACLGGELWTILR--DRGSFDDYTARFYVACVLEAFEYLHRKGIIYRDLKPENLLLDNR--GYLKLVDFGFAKKI 570 (732)
T ss_pred hhhhHHhhcCchhhhhhh--hcCCcccchhhhhHHHHHHHHHHHHhcCceeccCChhheeeccC--CceEEeehhhHHHh
Confidence 368999999999877633 332 22 222222233333788999999999999999999966 89999999999988
Q ss_pred CHH
Q 002031 319 SSS 321 (977)
Q Consensus 319 ~~~ 321 (977)
...
T Consensus 571 ~~g 573 (732)
T KOG0614|consen 571 GSG 573 (732)
T ss_pred ccC
Confidence 543
|
|
| >COG2112 Predicted Ser/Thr protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=98.24 E-value=1.2e-05 Score=80.11 Aligned_cols=125 Identities=23% Similarity=0.372 Sum_probs=90.5
Q ss_pred cccccccccEEEEEEecCCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCcHHHHH
Q 002031 124 TPLATASIAQVHRATLVDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEAE 203 (977)
Q Consensus 124 ~piasaSigqV~~A~l~~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea~ 203 (977)
.-+|.|..+.||.+.. .|.+||+|+++++.... ++..||+
T Consensus 28 ~~L~KG~~s~Vyl~~~-~~~~~a~Kvrr~ds~r~---------------------------------------~l~kEak 67 (201)
T COG2112 28 KELAKGTTSVVYLGEW-RGGEVALKVRRRDSPRR---------------------------------------NLEKEAK 67 (201)
T ss_pred hhhhcccccEEEEeec-cCceEEEEEecCCcchh---------------------------------------hHHHHHH
Confidence 5689999999999997 46799999999875422 3455777
Q ss_pred HHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeeecCCceEEeeccCCCCCCChHHHHhcCCCHHHHHHHHHHHHHHHHH
Q 002031 204 NTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQSSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAYAHQIY 283 (977)
Q Consensus 204 n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~l~~i~ 283 (977)
-++.+.. .-..|++|.-++.++.|||++|.+|.++.. +.+++.+...+-++| -+=
T Consensus 68 iLeil~g-------------------~~~~p~vy~yg~~~i~me~i~G~~L~~~~~----~~~rk~l~~vlE~a~--~LD 122 (201)
T COG2112 68 ILEILAG-------------------EGVTPEVYFYGEDFIRMEYIDGRPLGKLEI----GGDRKHLLRVLEKAY--KLD 122 (201)
T ss_pred HHHHhhh-------------------cCCCceEEEechhhhhhhhhcCcchhhhhh----cccHHHHHHHHHHHH--HHH
Confidence 7666643 235789998788888899999999987632 225565555544443 222
Q ss_pred hcCccccCCCCC--CeEEccCCCCceEEEeccccc
Q 002031 284 VDGFFNGDPHPG--NFLVSKDPPHRPILLDFGLTK 316 (977)
Q Consensus 284 ~~G~~H~D~hPg--NIlv~~~~~g~i~LiDFG~~~ 316 (977)
..||-|..++-+ ||++. ++++.||||-.++
T Consensus 123 ~~GI~H~El~~~~k~vlv~---~~~~~iIDFd~At 154 (201)
T COG2112 123 RLGIEHGELSRPWKNVLVN---DRDVYIIDFDSAT 154 (201)
T ss_pred HhccchhhhcCCceeEEec---CCcEEEEEccchh
Confidence 469999999843 66664 3589999998876
|
|
| >PRK09550 mtnK methylthioribose kinase; Reviewed | Back alignment and domain information |
|---|
Probab=98.24 E-value=2.8e-05 Score=89.19 Aligned_cols=109 Identities=16% Similarity=0.191 Sum_probs=66.4
Q ss_pred CCCHHHHHHHHHHHhCCChhhcccccCccccccccccEEEEEEecCC-CEEEEEEecCChhhhhHhhHHHHHHHHHHHHh
Q 002031 96 PRPVQEVSQTIEREFGESMGGMFMDFVETPLATASIAQVHRATLVDG-RQVVVKVQHQGIKTIILEDLKNAKSIVDWIAW 174 (977)
Q Consensus 96 ~~~~~~v~~~l~~elg~~~~~~f~~~d~~piasaSigqV~~A~l~~G-~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~ 174 (977)
++.-+.+...+.+..|.- .--...+.++++.|-+..||+.++.+| +.|+||...|.++..-.
T Consensus 6 ~l~~~~v~~yl~~~~~~~--~~~~~~~~~elggGn~N~VyrV~~~~g~~svIVKqa~p~~r~~g~--------------- 68 (401)
T PRK09550 6 TLTEEDAVEYAALKLGLF--DPKALLTAREIGDGNLNLVFRVSDTEGGKSVIVKQALPYVRVVGE--------------- 68 (401)
T ss_pred eCCHhHHHHHHHHhcCCC--CCcccceeeEcCCCceEEEEEEEeCCCCeEEEEEecCcccccccc---------------
Confidence 455566666664443311 111234457899999999999999877 58999987654331000
Q ss_pred hCCCCCCchhHHHHhhhcccccCcHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeee--cCCceEEeeccCCC
Q 002031 175 AEPQYDFNPIIDEWCKEAPKELDFNSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ--SSETVLILEFMDGI 252 (977)
Q Consensus 175 ~~~~~~~~~~~~e~~~~l~~Eld~~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~--~~~~vLVmE~i~G~ 252 (977)
.+. +..| .+..|++.+..+... .+..||+|+. ....+|||||+++.
T Consensus 69 -----~wp---------l~~e-R~~~Eae~L~~l~~~-----------------~p~~VPkV~~~D~~~~~lVME~L~~~ 116 (401)
T PRK09550 69 -----SWP---------LTLD-RARIEAEALKIQAKY-----------------VPDLVPKVYHYDEELAVTVMEDLSDH 116 (401)
T ss_pred -----ccc---------ccHH-HHHHHHHHHHHHHhh-----------------CCCCCCeEEEECCCCCEEEEecCCCc
Confidence 000 0000 134566666666542 2457999997 45579999999975
Q ss_pred C
Q 002031 253 R 253 (977)
Q Consensus 253 ~ 253 (977)
.
T Consensus 117 ~ 117 (401)
T PRK09550 117 K 117 (401)
T ss_pred c
Confidence 4
|
|
| >cd05150 APH Aminoglycoside 3'-phosphotransferase (APH) | Back alignment and domain information |
|---|
Probab=98.20 E-value=2.5e-05 Score=84.33 Aligned_cols=34 Identities=18% Similarity=0.133 Sum_probs=27.6
Q ss_pred cCccccCCCCCCeEEccCCCCceEEEecccccccCH
Q 002031 285 DGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 320 (977)
Q Consensus 285 ~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 320 (977)
..++|+|+||+|||++.+ +.+.||||+.++.-++
T Consensus 163 ~~l~HgD~~~~Nil~~~~--~~~~iIDwe~a~~gdp 196 (244)
T cd05150 163 LVVTHGDACLPNIIVDPG--KFSGFIDLGRLGVADR 196 (244)
T ss_pred eEEECCCCCCccEEEeCC--cEEEEEEccccccccH
Confidence 458999999999999853 5567999999875543
|
The APH subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). APH catalyzes the transfer of the gamma-phosphoryl group from ATP to aminoglycoside antibiotics such as kanamycin, streptomycin, neomycin, and gentamicin, among others. The aminoglycoside antibiotics target the 30S ribosome and promote miscoding, leading to the production of defective proteins which insert into the bacterial membrane, resulting in membrane damage and the ultimate demise of the bacterium. Phosphorylation of the aminoglycoside antibiotics results in their inactivation, leading to bacterial antibiotic resistance. The APH gene is found on transposons and plasmids and is thought to have originated as a self-defense mechanism used by microorganisms that produce the antibio |
| >cd05155 APH_ChoK_like_1 Uncharacterized bacterial proteins with similarity to Aminoglycoside 3'-phosphotransferase (APH) and Choline kinase (ChoK) family members | Back alignment and domain information |
|---|
Probab=98.19 E-value=2.2e-05 Score=84.33 Aligned_cols=33 Identities=36% Similarity=0.587 Sum_probs=26.6
Q ss_pred cCccccCCCCCCeEEccCCCCce-EEEecccccccCH
Q 002031 285 DGFFNGDPHPGNFLVSKDPPHRP-ILLDFGLTKKLSS 320 (977)
Q Consensus 285 ~G~~H~D~hPgNIlv~~~~~g~i-~LiDFG~~~~l~~ 320 (977)
.+++|+|+||+|||++. +++ .||||+.+..=++
T Consensus 164 ~~l~HGD~~~~Nvlv~~---~~i~giIDw~~a~~gDp 197 (235)
T cd05155 164 PVWFHGDLAPGNLLVQD---GRLSAVIDFGCLGVGDP 197 (235)
T ss_pred ceEEeCCCCCCcEEEEC---CCEEEEEeCcccCcCCh
Confidence 56999999999999973 355 6999999766544
|
The APH/ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates, such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides, and macrolides leads to their inactivation and to bacterial antibiotic resista |
| >PRK05231 homoserine kinase; Provisional | Back alignment and domain information |
|---|
Probab=98.13 E-value=3.5e-05 Score=86.83 Aligned_cols=50 Identities=12% Similarity=0.121 Sum_probs=35.2
Q ss_pred CCCCHHHHHHHHHHHhCCChhhcccccCccccccccccEEEEEEecCCCEEEEEEec
Q 002031 95 PPRPVQEVSQTIEREFGESMGGMFMDFVETPLATASIAQVHRATLVDGRQVVVKVQH 151 (977)
Q Consensus 95 p~~~~~~v~~~l~~elg~~~~~~f~~~d~~piasaSigqV~~A~l~~G~~VAVKv~~ 151 (977)
.+.+.++++.++ +.+|- .++ .+-++++.|...++|+....+| .+++|+.+
T Consensus 5 t~ls~~~l~~~l-~~y~~--~~~---~~~~~l~~G~~n~~y~v~t~~g-~~vLK~~~ 54 (319)
T PRK05231 5 TDVSDDELAAFL-APYDL--GEL---LSLKGIAEGIENSNFFLTTTQG-EYVLTLFE 54 (319)
T ss_pred ccCCHHHHHHHH-HhcCC--chh---hccchhccccccceEEEEeCCC-cEEEEEec
Confidence 456777887777 56664 121 1236789999999999987555 68889764
|
|
| >PF01636 APH: Phosphotransferase enzyme family This family is part of the larger protein kinase superfamily | Back alignment and domain information |
|---|
Probab=98.12 E-value=1.7e-05 Score=84.33 Aligned_cols=36 Identities=31% Similarity=0.378 Sum_probs=24.5
Q ss_pred hcCccccCCCCCCeEEccCCCCceEEEecccccccCH
Q 002031 284 VDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 320 (977)
Q Consensus 284 ~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 320 (977)
..+++|+|+||+|||++++ +++|.||||+.++.-+.
T Consensus 165 ~~~~~HgD~~~~Nil~~~~-~~~i~iID~e~a~~~~~ 200 (239)
T PF01636_consen 165 PPVLIHGDLHPGNILVDPS-DGRIGIIDFEDAGWGDP 200 (239)
T ss_dssp CEEEE-SS-SGGGEEEESS-TTEEEE--GTT-EEEET
T ss_pred CcEEEEeccccccceeeec-cceeEEEecccceECCH
Confidence 3679999999999999832 36778999999876644
|
; InterPro: IPR002575 This entry consists of bacterial antibiotic resistance proteins, which confer resistance to various aminoglycosides they include:- aminoglycoside 3'-phosphotransferase or kanamycin kinase / neomycin-kanamycin phosphotransferase and streptomycin 3''-kinase or streptomycin 3''-phosphotransferase. The aminoglycoside phosphotransferases inactivate aminoglycoside antibiotics via phosphorylation []. The proteins are found in a range of taxonomic groups.; PDB: 2PPQ_A 2Q83_B 3TDV_B 3TDW_A 3I0O_A 3I0Q_A 3I1A_B 3Q2M_A 3HAV_C 2PUI_B .... |
| >COG0515 SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair] | Back alignment and domain information |
|---|
Probab=98.09 E-value=1.8e-05 Score=86.89 Aligned_cols=141 Identities=21% Similarity=0.242 Sum_probs=87.8
Q ss_pred cccccccccEEEEEEecCCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCcHHHHH
Q 002031 124 TPLATASIAQVHRATLVDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEAE 203 (977)
Q Consensus 124 ~piasaSigqV~~A~l~~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea~ 203 (977)
+.+|.|++++||++... ..+++|+..+....... ....+.+|..
T Consensus 6 ~~l~~g~~~~v~~~~~~--~~~~~k~~~~~~~~~~~----------------------------------~~~~~~~e~~ 49 (384)
T COG0515 6 RKLGEGSFGEVYLARDR--KLVALKVLAKKLESKSK----------------------------------EVERFLREIQ 49 (384)
T ss_pred EeecCCCCeEEEEEEec--cEEEEEeechhhccchh----------------------------------HHHHHHHHHH
Confidence 46789999999999976 88999988765432210 0112333444
Q ss_pred HHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeeec-CCceEEeeccCCCCCCChHHHHh--cCCCHHHHHHHHHHHH--
Q 002031 204 NTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQS-SETVLILEFMDGIRLNDCESLEA--FGVNKQKVVEEITRAY-- 278 (977)
Q Consensus 204 n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~~-~~~vLVmE~i~G~~L~~~~~~~~--~~~~~~~l~~~l~~~~-- 278 (977)
-+..+.+. ...+.+-..+.. ...+++|+++.|..+.+...... .............+..
T Consensus 50 ~~~~~~~~----------------~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 113 (384)
T COG0515 50 ILASLNHP----------------PNIVKLYDFFQDEGSLYLVMEYVDGGSLEDLLKKIGRKGPLSESEALFILAQILSA 113 (384)
T ss_pred HHHHccCC----------------cceeeEEEEEecCCEEEEEEecCCCCcHHHHHHhcccccCCCHHHHHHHHHHHHHH
Confidence 33322210 001111111222 22589999999999885432211 0344444444444443
Q ss_pred HHHHHhcCccccCCCCCCeEEccCCCC-ceEEEeccccccc
Q 002031 279 AHQIYVDGFFNGDPHPGNFLVSKDPPH-RPILLDFGLTKKL 318 (977)
Q Consensus 279 l~~i~~~G~~H~D~hPgNIlv~~~~~g-~i~LiDFG~~~~l 318 (977)
+..+|..|++|||+||.||+++.. + .++++|||++..+
T Consensus 114 l~~~H~~~~~hrd~kp~nil~~~~--~~~~~l~dfg~~~~~ 152 (384)
T COG0515 114 LEYLHSKGIIHRDIKPENILLDRD--GRVVKLIDFGLAKLL 152 (384)
T ss_pred HHHHHhCCeeccCCCHHHeeecCC--CCeEEEeccCcceec
Confidence 568999999999999999999865 5 6999999998833
|
|
| >PF03881 Fructosamin_kin: Fructosamine kinase; InterPro: IPR016477 Ketosamines derive from a non-enzymatic reaction between a sugar and a protein [] | Back alignment and domain information |
|---|
Probab=98.09 E-value=1.6e-05 Score=87.63 Aligned_cols=92 Identities=25% Similarity=0.415 Sum_probs=58.1
Q ss_pred HHHHHHHHHHHhCCChhhcccccCccccccccccEEEEEEecCCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCC
Q 002031 99 VQEVSQTIEREFGESMGGMFMDFVETPLATASIAQVHRATLVDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQ 178 (977)
Q Consensus 99 ~~~v~~~l~~elg~~~~~~f~~~d~~piasaSigqV~~A~l~~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~ 178 (977)
|..|.+.|.+.+|.+.. --+.+|++.|+|.++|+.. .+++.+-||+........
T Consensus 2 w~~i~~~~~~~~~~~~~----i~~~~~v~GG~i~~a~~~~-~~~~~~FvK~~~~~~~~~--------------------- 55 (288)
T PF03881_consen 2 WQAIEQQISEQLGADFK----ITSIEPVSGGDINEAYRLD-TDGGSYFVKVNSESGRDM--------------------- 55 (288)
T ss_dssp HHHHHHHHHHHHTS---------EEEEE--SSSSEEEEEE-TTS-EEEEEEEEGGGCCH---------------------
T ss_pred hHHHHHHHHHHhCCCCc----eeeeEecCCCChhheEEEE-CCCccEEEEecChhhHHH---------------------
Confidence 56788999999987621 1123789999999999988 578999999886332222
Q ss_pred CCCchhHHHHhhhcccccCcHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeee----cCCceEEeeccCCC
Q 002031 179 YDFNPIIDEWCKEAPKELDFNSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ----SSETVLILEFMDGI 252 (977)
Q Consensus 179 ~~~~~~~~e~~~~l~~Eld~~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~----~~~~vLVmE~i~G~ 252 (977)
|..|++.++.+++. ..+.||+|+. .+..+|+|||++..
T Consensus 56 -------------------f~~Ea~gL~~L~~~-----------------~~~~vP~vi~~G~~~~~~fLlle~l~~~ 97 (288)
T PF03881_consen 56 -------------------FEGEAEGLKALAEA-----------------NPIRVPKVIAWGEYDDDAFLLLEFLEMG 97 (288)
T ss_dssp -------------------HHHHHHHHHHHCHT-----------------TTSBS--EEEEEE-SSCCEEEEE-----
T ss_pred -------------------HHHHHHHHHHHHhc-----------------CCCCCCeEEEEEeecCCceEEEEeecCC
Confidence 45677888777541 3578999985 35679999999876
|
Ketosamine-3-kinases (KT3K), of which fructosamine-3-kinase (FN3K) is the best-known example, catalyse the phosphorylation of the ketosamine moiety of glycated proteins. The instability of a phosphorylated ketosamine leads to its degradation, and KT3K is thus thought to be involved in protein repair []. The function of the prokaryotic members of this group has not been established. However, several lines of evidence indicate that they may function as fructosamine-3-kinases (FN3K). First, they are similar to characterised FN3K from mouse and human. Second, the Escherichia coli members are found in close proximity on the genome to fructose-6-phosphate kinase (PfkB). Last, FN3K activity has been found in a Anacystis montana (Gloeocapsa montana Kutzing 1843) [], indicating such activity-directly demonstrated in eukaryotes-is nonetheless not confined to eukaryotes. This family includes eukaryotic fructosamine-3-kinase enzymes [] which may initiate a process leading to the deglycation of fructoselysine and of glycated proteins and in the phosphorylation of 1-deoxy-1-morpholinofructose, fructoselysine, fructoseglycine, fructose and glycated lysozyme. The family also includes bacterial members that have not been characterised but probably have a similar or identical function. For additional information please see [].; PDB: 3JR1_B 3F7W_A. |
| >PLN02756 S-methyl-5-thioribose kinase | Back alignment and domain information |
|---|
Probab=98.06 E-value=8.9e-05 Score=84.77 Aligned_cols=59 Identities=14% Similarity=0.174 Sum_probs=39.9
Q ss_pred hCCCCCCHHHHHHHHHHH------hCCChhhcccccCccccccccccEEEEEEecCCCEEEEEEecCChh
Q 002031 92 DSLPPRPVQEVSQTIERE------FGESMGGMFMDFVETPLATASIAQVHRATLVDGRQVVVKVQHQGIK 155 (977)
Q Consensus 92 d~~p~~~~~~v~~~l~~e------lg~~~~~~f~~~d~~piasaSigqV~~A~l~~G~~VAVKv~~p~i~ 155 (977)
...-+++.+.+...+.+. +|.. +.....++||-|.+..||+... ++..|+||...|.++
T Consensus 4 ~~y~~l~~~~l~~yl~~~~~~~~~l~g~----~~~l~~~eiggGn~N~VyrV~~-~~~svVVKqa~p~~r 68 (418)
T PLN02756 4 SEFRPLDEKSLVEYIKATPALSSKIGND----LDDLKIKEVGDGNLNFVYIVVS-SSGSFVIKQALPYIR 68 (418)
T ss_pred cccccCCHHHHHHHHHHccchhhhcCCC----CCCceEEEcCCCceeeEEEEEc-CCccEEEEeCCcccc
Confidence 344566666666666554 3211 2334567899999999999886 456799998777654
|
|
| >KOG4278 consensus Protein tyrosine kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=98.03 E-value=3.8e-06 Score=96.11 Aligned_cols=139 Identities=20% Similarity=0.184 Sum_probs=87.9
Q ss_pred ccccccccccEEEEEEec-CCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCcHHH
Q 002031 123 ETPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSE 201 (977)
Q Consensus 123 ~~piasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~E 201 (977)
...+|-|-+|.||.|.++ -.-.||||.++.+..+ ++ .|..|
T Consensus 272 khKLGGGQYGeVYeGvWKkyslTvAVKtLKEDtMe----------------------------ve----------EFLkE 313 (1157)
T KOG4278|consen 272 KHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME----------------------------VE----------EFLKE 313 (1157)
T ss_pred eeccCCCcccceeeeeeeccceeeehhhhhhcchh----------------------------HH----------HHHHH
Confidence 357999999999999985 4578999976543211 11 24556
Q ss_pred HHHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeeecC---CceEEeeccCCCCCCChHHHHhcC-CCHHHHHHHHHH-
Q 002031 202 AENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQSS---ETVLILEFMDGIRLNDCESLEAFG-VNKQKVVEEITR- 276 (977)
Q Consensus 202 a~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~~~---~~vLVmE~i~G~~L~~~~~~~~~~-~~~~~l~~~l~~- 276 (977)
|..++.+.+- .-|..--| |+ .-|+++|||.-+.|-|+....... +..--++....+
T Consensus 314 AAvMKeikHp-----------------NLVqLLGV--CT~EpPFYIiTEfM~yGNLLdYLRecnr~ev~avvLlyMAtQI 374 (1157)
T KOG4278|consen 314 AAVMKEIKHP-----------------NLVQLLGV--CTHEPPFYIITEFMCYGNLLDYLRECNRSEVPAVVLLYMATQI 374 (1157)
T ss_pred HHHHHhhcCc-----------------cHHHHhhh--hccCCCeEEEEecccCccHHHHHHHhchhhcchhHHHHHHHHH
Confidence 6655554330 00111111 32 247999999988887764322111 111112222222
Q ss_pred -HHHHHHHhcCccccCCCCCCeEEccCCCCceEEEecccccccCH
Q 002031 277 -AYAHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 320 (977)
Q Consensus 277 -~~l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 320 (977)
..++.+-..+|||||+-..|.||.++ .-+++.|||+++.+..
T Consensus 375 sSaMeYLEkknFIHRDLAARNCLVgEn--hiVKvADFGLsRlMtg 417 (1157)
T KOG4278|consen 375 SSAMEYLEKKNFIHRDLAARNCLVGEN--HIVKVADFGLSRLMTG 417 (1157)
T ss_pred HHHHHHHHHhhhhhhhhhhhhcccccc--ceEEeeccchhhhhcC
Confidence 23667778999999999999999865 7789999999887654
|
|
| >KOG0584 consensus Serine/threonine protein kinase [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.03 E-value=1.8e-06 Score=99.89 Aligned_cols=77 Identities=16% Similarity=0.126 Sum_probs=55.9
Q ss_pred ceEEeeccCCCCCCChHHHHhcCCCHHHHHHHHHHHH--HHHHHh--cCccccCCCCCCeEEccCCCCceEEEecccccc
Q 002031 242 TVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--AHQIYV--DGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKK 317 (977)
Q Consensus 242 ~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~--l~~i~~--~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~ 317 (977)
-++|+|.+.+++|..+.. +...++.+.+-.+.-+++ +..+|. --|+|||||-.||+|+.. .|.++|-|.|++..
T Consensus 118 in~iTEL~TSGtLr~Y~k-k~~~vn~kaik~W~RQILkGL~yLHs~~PPIIHRDLKCDNIFinG~-~G~VKIGDLGLAtl 195 (632)
T KOG0584|consen 118 INFITELFTSGTLREYRK-KHRRVNIKAIKSWCRQILKGLVYLHSQDPPIIHRDLKCDNIFVNGN-LGEVKIGDLGLATL 195 (632)
T ss_pred eeeeeecccCCcHHHHHH-HhccCCHHHHHHHHHHHHHHhhhhhcCCCCccccccccceEEEcCC-cCceeecchhHHHH
Confidence 378999999999988743 333455554444444433 445554 359999999999999864 68999999999876
Q ss_pred cCH
Q 002031 318 LSS 320 (977)
Q Consensus 318 l~~ 320 (977)
+..
T Consensus 196 ~r~ 198 (632)
T KOG0584|consen 196 LRK 198 (632)
T ss_pred hhc
Confidence 543
|
|
| >PRK12396 5-methylribose kinase; Reviewed | Back alignment and domain information |
|---|
Probab=98.02 E-value=5e-05 Score=86.27 Aligned_cols=51 Identities=24% Similarity=0.510 Sum_probs=38.9
Q ss_pred cCccccCCCCCCeEEccCCCCceEEEe--cccccccCHHHHHHHHHHHHHHHcCCH
Q 002031 285 DGFFNGDPHPGNFLVSKDPPHRPILLD--FGLTKKLSSSMKQALAKMFFAAAEGDH 338 (977)
Q Consensus 285 ~G~~H~D~hPgNIlv~~~~~g~i~LiD--FG~~~~l~~~~r~~~~~l~~a~~~~d~ 338 (977)
..++|+|+||||||++++ .+++|| |+..+.+.=+.=.-+.+|+.+.+.++.
T Consensus 227 ~aLlHGDlHtGSI~v~~~---~~kvIDpEFAfyGP~gFDiG~~lanll~ay~~~~~ 279 (409)
T PRK12396 227 QALIHGDLHTGSVFVKND---STKVIDPEFAFYGPMGYDIGNVMANLMFAWVNADA 279 (409)
T ss_pred hhhccCcCCCCCEEecCC---ceEEEcccccccCCcHHHHHHHHHHHHHHHhcCcc
Confidence 578999999999999854 689999 555666555555567788888876654
|
|
| >cd05157 ETNK_euk Ethanolamine kinase (ETNK) in eukaryotes | Back alignment and domain information |
|---|
Probab=97.98 E-value=6.9e-05 Score=80.34 Aligned_cols=77 Identities=17% Similarity=0.246 Sum_probs=53.8
Q ss_pred ccccccccccEEEEEEecC--CCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCcHH
Q 002031 123 ETPLATASIAQVHRATLVD--GRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNS 200 (977)
Q Consensus 123 ~~piasaSigqV~~A~l~~--G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~ 200 (977)
-+++..|-..+||+....+ ++.|++|+..++... -+|..+
T Consensus 3 i~~l~gG~tN~~~~v~~~~~~~~~~vlR~~~~~~~~--------------------------------------~~d~~~ 44 (235)
T cd05157 3 FKRFTGGITNKLVKVSNKEDNQDAVLVRVYGNKTEL--------------------------------------IIDRER 44 (235)
T ss_pred EEEcCCcccceEEEEEcCCCCCCeEEEEEccCCccc--------------------------------------eecHHH
Confidence 4688899999999998764 689999986654221 123345
Q ss_pred HHHHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeeecCCceEEeeccCCCCCCC
Q 002031 201 EAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQSSETVLILEFMDGIRLND 256 (977)
Q Consensus 201 Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~~~~~vLVmE~i~G~~L~~ 256 (977)
|...+..+... .+ +|+++...+..++|||++|.++..
T Consensus 45 E~~~~~~l~~~------------------gl-~P~v~~~~~~~~l~e~i~G~~l~~ 81 (235)
T cd05157 45 ELRIHKLLSKH------------------GL-APKLYATFQNGLIYEFIPGRTLEP 81 (235)
T ss_pred HHHHHHHHHhC------------------CC-CCeEEEEeCCcEEEEeeCCCcCCH
Confidence 77766666531 23 678776555679999999988753
|
ETNK is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major phospholipid, phosphatidylethanolamine (PtdEtn). Unlike ChoK, ETNK shows specific activity for its substrate, and displays negligible activity towards N-methylated derivatives of Etn. The Drosophila ETNK is implicated in development and neuronal function. Mammals contain two ETNK proteins, ETNK1 and ETNK2. ETNK1 selectively increases Etn uptake and phosphorylation, as well as PtdEtn synthesis. ETNK2 is found primarily in the liver and reproductive tissues. It plays a critical role in regulating placental hemostasis to support late embryo |
| >TIGR02721 ycfN_thiK thiamine kinase | Back alignment and domain information |
|---|
Probab=97.98 E-value=4.5e-05 Score=83.08 Aligned_cols=137 Identities=18% Similarity=0.147 Sum_probs=84.2
Q ss_pred cccccccccEEEEEEecCCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCcHHHHH
Q 002031 124 TPLATASIAQVHRATLVDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEAE 203 (977)
Q Consensus 124 ~piasaSigqV~~A~l~~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea~ 203 (977)
.++..|-..++|+.. .+|+.++||+..++... -.+|..+|.+
T Consensus 2 ~~~~~G~tn~~y~~~-~~~~~~vlR~~~~~~~~-------------------------------------~~~~r~~E~~ 43 (256)
T TIGR02721 2 QTLSGGLTNRSWRIE-HPGISFVWRPQSPVCKA-------------------------------------LGVDRQREYQ 43 (256)
T ss_pred CcCCCcCcCCeEEEE-eCCccEEEeeCCccccc-------------------------------------ccCcHHHHHH
Confidence 356788888999987 46788999975543210 0135566777
Q ss_pred HHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeeecCCceEEeeccCCCCCCCh--------HH-------HHhc-----
Q 002031 204 NTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQSSETVLILEFMDGIRLNDC--------ES-------LEAF----- 263 (977)
Q Consensus 204 n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~~~~~vLVmE~i~G~~L~~~--------~~-------~~~~----- 263 (977)
.+..+... .+ .|+++......+||||++|.++... .. +...
T Consensus 44 ~l~~l~~~------------------g~-~P~~i~~~~~~~v~e~i~G~~~~~~~~~~~~~~~~la~~l~~lH~~~~~~~ 104 (256)
T TIGR02721 44 ILQALSAL------------------GL-APKPILVNEHWLLVEWLEGEVITLDQFVALDLLLELAALLHQLHSQPRFGY 104 (256)
T ss_pred HHHHHHhc------------------CC-CCceEEEeCCEEEEEeccCcccccccccCchhHHHHHHHHHHHhCCCCCCC
Confidence 77776541 12 5888875567899999999887642 00 1100
Q ss_pred CCCHH-HHHHH---H--------HHHHHHHHH--------hcCccccCCCCCCeEEccCCCCceEEEecccccccCH
Q 002031 264 GVNKQ-KVVEE---I--------TRAYAHQIY--------VDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 320 (977)
Q Consensus 264 ~~~~~-~l~~~---l--------~~~~l~~i~--------~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 320 (977)
..+.. .+... + ....++.+. ...++|+|+||+||+++.+ + +.||||..++.=++
T Consensus 105 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~H~Dl~~~Nil~~~~--~-~~lIDwE~a~~gdp 178 (256)
T TIGR02721 105 PLSLKARIAHYWLQIDPARRTPEWLRLYKQFRSAPEPAPLPLAPLHMDVHAYNLVVTPQ--G-LKLIDWEYASDGDI 178 (256)
T ss_pred CCCHHHHHHHHHHhcccccCChHHHHHHHHHHhccCCCCCCCeeecCCCCcCcEEEeCC--C-CEEEeccccCcCCH
Confidence 01111 11110 0 001111221 2368999999999999854 4 89999999876554
|
Members of this family are the ycfN gene product of Escherichia coli, now identified as the salvage enzyme thiamine kinase (thiK), and additional proteobacterial homologs taken to be orthologs with equivalent function. |
| >KOG0200 consensus Fibroblast/platelet-derived growth factor receptor and related receptor tyrosine kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=97.91 E-value=3.2e-05 Score=94.64 Aligned_cols=139 Identities=16% Similarity=0.148 Sum_probs=92.5
Q ss_pred ccccccccEEEEEEec----C----CCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhccccc
Q 002031 125 PLATASIAQVHRATLV----D----GRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKEL 196 (977)
Q Consensus 125 piasaSigqV~~A~l~----~----G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~El 196 (977)
++|+|.||+|++|.++ . ...||||..+......-..
T Consensus 303 ~lg~g~fG~v~~~~~~~~~~~~~~~~~~VaVK~~k~~~~~~~~~------------------------------------ 346 (609)
T KOG0200|consen 303 YLGEGAFGQVVKALLFGLSKALLSIYVTVAVKMLKENASSSEKK------------------------------------ 346 (609)
T ss_pred eeecccccceEeEEEeecccccccceEEEEEEecccccCcHHHH------------------------------------
Confidence 8999999999999863 1 4579999877655431111
Q ss_pred CcHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeee---cCCceEEeeccCCCCCCChHHHHh-----------
Q 002031 197 DFNSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ---SSETVLILEFMDGIRLNDCESLEA----------- 262 (977)
Q Consensus 197 d~~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~---~~~~vLVmE~i~G~~L~~~~~~~~----------- 262 (977)
++..|.+.+..+.... . .|--+.. .+..++|+||++.+.|.++....+
T Consensus 347 ~~~~El~~m~~~g~H~-----------------n-iv~llG~~t~~~~~~~v~Ey~~~G~L~~~Lr~~r~~~~~~~~~~~ 408 (609)
T KOG0200|consen 347 DLMSELNVLKELGKHP-----------------N-IVNLLGACTQDGPLYVIVEYAEHGDLLEFLRKKRVTESIDGSGVF 408 (609)
T ss_pred HHHHHHHHHHHhcCCc-----------------c-hhhheeeeccCCceEEEEEeccCCcHHHHHHhccccccccccCCC
Confidence 2333444444443211 0 1111111 344689999999988887744333
Q ss_pred ----cCCCHHHHHHHHHHHH--HHHHHhcCccccCCCCCCeEEccCCCCceEEEecccccccC
Q 002031 263 ----FGVNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 319 (977)
Q Consensus 263 ----~~~~~~~l~~~l~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~ 319 (977)
..+....+.....++. ++.+....++|||+=.-|||+..+ ..+++.|||+++...
T Consensus 409 ~~~~~~L~~~dLlsfa~QIa~GMe~L~~~~~vHRDLAaRNVLi~~~--~~~kIaDFGlar~~~ 469 (609)
T KOG0200|consen 409 PNERDALTTKDLLSFAYQIANGMEYLASVPCVHRDLAARNVLITKN--KVIKIADFGLARDHY 469 (609)
T ss_pred ccccCCcCHHHHHHHHHHHHHHHHHHhhCCccchhhhhhhEEecCC--CEEEEccccceeccC
Confidence 1145555665555555 667778999999999999999865 689999999998543
|
|
| >KOG1290 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=97.91 E-value=2.1e-05 Score=88.69 Aligned_cols=126 Identities=17% Similarity=0.193 Sum_probs=73.9
Q ss_pred ccccccccccEEEEEEe-cCCCEEEEEEecCC--hhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCcH
Q 002031 123 ETPLATASIAQVHRATL-VDGRQVVVKVQHQG--IKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFN 199 (977)
Q Consensus 123 ~~piasaSigqV~~A~l-~~G~~VAVKv~~p~--i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~ 199 (977)
.+.+|=|-|+.|+.|.+ .+.+.||+||++-. ..+....++++|+.+..- .|
T Consensus 83 ~rKLGWGHFSTVWLawDtq~~r~VAlKVvKSAqhYtEaAlDEIklL~~v~~~----Dp---------------------- 136 (590)
T KOG1290|consen 83 QRKLGWGHFSTVWLAWDTQNKRYVALKVVKSAQHYTEAALDEIKLLQQVREG----DP---------------------- 136 (590)
T ss_pred EEeccccccceeEEEeeccCCeEEEEEEEehhhHHHHHHHHHHHHHHHHHhc----CC----------------------
Confidence 57899999999999987 46789999999742 223333344444433210 00
Q ss_pred HHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeee-------c-CCceEEeeccCCCCCCChHHH-HhcCCCHHHH
Q 002031 200 SEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-------S-SETVLILEFMDGIRLNDCESL-EAFGVNKQKV 270 (977)
Q Consensus 200 ~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-------~-~~~vLVmE~i~G~~L~~~~~~-~~~~~~~~~l 270 (977)
.....-.|-+++. . ..-++|.|++ |..|-.+... .-.|+....+
T Consensus 137 --------------------------~~~~~~~VV~LlD~FkhsGpNG~HVCMVfEvL-GdnLLklI~~s~YrGlpl~~V 189 (590)
T KOG1290|consen 137 --------------------------NDPGKKCVVQLLDHFKHSGPNGQHVCMVFEVL-GDNLLKLIKYSNYRGLPLSCV 189 (590)
T ss_pred --------------------------CCCCCceeeeeeccceecCCCCcEEEEEehhh-hhHHHHHHHHhCCCCCcHHHH
Confidence 0001111222211 1 2236899988 6655444322 2235554444
Q ss_pred HHHHHHHH--HHHHHh-cCccccCCCCCCeEEcc
Q 002031 271 VEEITRAY--AHQIYV-DGFFNGDPHPGNFLVSK 301 (977)
Q Consensus 271 ~~~l~~~~--l~~i~~-~G~~H~D~hPgNIlv~~ 301 (977)
-++..+++ +..+|+ .||+|.||||.|||+..
T Consensus 190 K~I~~qvL~GLdYLH~ecgIIHTDlKPENvLl~~ 223 (590)
T KOG1290|consen 190 KEICRQVLTGLDYLHRECGIIHTDLKPENVLLCS 223 (590)
T ss_pred HHHHHHHHHHHHHHHHhcCccccCCCcceeeeec
Confidence 44433433 777775 89999999999999963
|
|
| >PLN00181 protein SPA1-RELATED; Provisional | Back alignment and domain information |
|---|
Probab=97.76 E-value=2.5e-05 Score=99.05 Aligned_cols=74 Identities=14% Similarity=0.135 Sum_probs=50.7
Q ss_pred CceEEeeccCCCCCCChHHHHhcCCCHHHHHHHHHHHH--HHHHHhcCccccCCCCCCeEEccCCCCceEEEecccccc
Q 002031 241 ETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKK 317 (977)
Q Consensus 241 ~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~ 317 (977)
..|++|||.+ .+|.++.......++...+...+.+++ +..+|..||+||||||.||||+.. ++++++|||++..
T Consensus 54 ~~~~~~e~~~-~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~gIvHrDlKP~NiLl~~~--~~~k~~d~~~~~~ 129 (793)
T PLN00181 54 SIVRALECED-VSLRQWLDNPDRSVDAFECFHVFRQIVEIVNAAHSQGIVVHNVRPSCFVMSSF--NHVSFIESASCSD 129 (793)
T ss_pred hhhhhhccCC-ccHHHHHhcccccccHHHHHHHHHHHHHHHHHHHhCCeeeccCCchhEEEccc--CcEEEeeccccCc
Confidence 3577899874 477776432223355555555555544 788999999999999999999743 5566666665543
|
|
| >PRK06148 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=97.76 E-value=0.00044 Score=89.27 Aligned_cols=56 Identities=23% Similarity=0.338 Sum_probs=45.1
Q ss_pred HHhCCCCCCHHHHHHHHHHHhCCChhhcccccCccccccccccEEEEEEecCCCEEEEEEecCC
Q 002031 90 LQDSLPPRPVQEVSQTIEREFGESMGGMFMDFVETPLATASIAQVHRATLVDGRQVVVKVQHQG 153 (977)
Q Consensus 90 Lqd~~p~~~~~~v~~~l~~elg~~~~~~f~~~d~~piasaSigqV~~A~l~~G~~VAVKv~~p~ 153 (977)
+....|.++.+++++++++.+|-.- + .++|++ ..-++|+.+..+|+.+++||.+|.
T Consensus 4 ~~~~~p~~s~~~~~~~~~~~ygl~~-~------~~~L~s-~~d~nf~v~~~~g~~yVLKi~~~~ 59 (1013)
T PRK06148 4 LSHPAPEFTTKDAEALLAQHFGISA-T------ATPLDG-ERDLNFRLTTDDGADYILKIVNPS 59 (1013)
T ss_pred CCCCCCCCCHHHHHHHHHHHcCCce-E------EeecCC-cCCceEEEEeCCCCeEEEEEcCCc
Confidence 3456788999999999999998642 1 257854 568999998888999999999886
|
|
| >PF14531 Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_A 3Q5Z_A 3Q60_A | Back alignment and domain information |
|---|
Probab=97.74 E-value=0.00014 Score=79.55 Aligned_cols=40 Identities=28% Similarity=0.442 Sum_probs=30.4
Q ss_pred HHHHHhcCccccCCCCCCeEEccCCCCceEEEecccccccCH
Q 002031 279 AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 320 (977)
Q Consensus 279 l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 320 (977)
...+|..|++|+|++|.|++++.+ |.+.|-||+.+.....
T Consensus 158 vA~Lh~~GlVHgdi~~~nfll~~~--G~v~Lg~F~~~~r~g~ 197 (288)
T PF14531_consen 158 VANLHSYGLVHGDIKPENFLLDQD--GGVFLGDFSSLVRAGT 197 (288)
T ss_dssp HHHHHHTTEEEST-SGGGEEE-TT--S-EEE--GGGEEETTE
T ss_pred HHHHhhcceEecccceeeEEEcCC--CCEEEcChHHHeecCc
Confidence 557889999999999999999966 9999999998877654
|
|
| >COG1686 DacC D-alanyl-D-alanine carboxypeptidase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=97.72 E-value=0.00018 Score=82.30 Aligned_cols=54 Identities=26% Similarity=0.345 Sum_probs=43.8
Q ss_pred ccceEEEEE--ecCeeEEEeeccccCCCCCCCCCCCCcceeecchHHHHHHHHHHHHHCCCcCcCCchh
Q 002031 495 ILGIQVCAY--KDGEVIIDTSAGMLGRYDPRPVQPDSLFPVFSVTKGITAGMLHWLVDNGKLKLEENIA 561 (977)
Q Consensus 495 ~pG~svaVv--~~g~~v~~~~~G~~~~~~~~~~t~~T~f~i~SiTK~~ta~~v~~lv~~G~l~ld~~v~ 561 (977)
+.+-+..|+ ..|+++|++ ++|+++++||+||.+|+.+++..++.|+|++|++|.
T Consensus 36 ~~a~~aiviD~~sGkVLy~k-------------n~d~~~~pASlTKlMTayv~~ea~~~gki~~~~~v~ 91 (389)
T COG1686 36 IAAKAAIVIDADSGKVLYSK-------------NADARRPPASLTKLMTAYVVLEALKAGKIKLDDKVT 91 (389)
T ss_pred cccceEEEEECCCCcEeecc-------------CCCCCCCccHHHHHHHHHHHHHHhhccCCCccceec
Confidence 333344444 678888742 668899999999999999999999999999999875
|
|
| >cd05153 HomoserineK_II Homoserine Kinase, type II | Back alignment and domain information |
|---|
Probab=97.71 E-value=0.00031 Score=78.18 Aligned_cols=32 Identities=22% Similarity=0.262 Sum_probs=27.0
Q ss_pred cCccccCCCCCCeEEccCCCCceEEEeccccccc
Q 002031 285 DGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKL 318 (977)
Q Consensus 285 ~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l 318 (977)
.+++|+|+||+||+++.+ +.+.||||+.+..=
T Consensus 175 ~~l~HgD~~~~Nil~~~~--~~~~iIDfe~a~~g 206 (296)
T cd05153 175 RGVIHADLFRDNVLFDGD--ELSGVIDFYFACTD 206 (296)
T ss_pred CcCCccCcCcccEEEeCC--ceEEEeehhhhcCc
Confidence 689999999999999854 45689999988753
|
Homoserine kinase is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This subfamily is composed of unusual homoserine kinases, from a subset of bacteria, which have a PK fold. These proteins do not bear any similarity to the GHMP family homoserine kinases present in most bacteria and eukaryotes. Homoserine kinase catalyzes the transfer of the gamma-phosphoryl group from ATP to L-homoserine producing L-homoserine phosphate, an intermediate in the production of the amino acids threonine, methionine, and isoleucine. |
| >PRK15442 beta-lactamase TEM; Provisional | Back alignment and domain information |
|---|
Probab=97.67 E-value=0.0028 Score=69.79 Aligned_cols=36 Identities=31% Similarity=0.478 Sum_probs=33.9
Q ss_pred CCCCcceeecchHHHHHHHHHHHHHCCCcCcCCchh
Q 002031 526 QPDSLFPVFSVTKGITAGMLHWLVDNGKLKLEENIA 561 (977)
Q Consensus 526 t~~T~f~i~SiTK~~ta~~v~~lv~~G~l~ld~~v~ 561 (977)
+.|..|+++|+.|.+++.+++..+++|+++||++|.
T Consensus 57 n~d~~fp~aSt~K~~i~~avl~~v~~g~l~L~~~v~ 92 (284)
T PRK15442 57 RPEERFPMMSTFKVLLCGAVLSRVDAGQEQLGRRIH 92 (284)
T ss_pred cCCCcccchHHHHHHHHHHHHHHHHCCCCCCCceEE
Confidence 568899999999999999999999999999999975
|
|
| >cd05152 MPH2' Macrolide 2'-Phosphotransferase (MPH2') | Back alignment and domain information |
|---|
Probab=97.65 E-value=0.001 Score=73.32 Aligned_cols=36 Identities=31% Similarity=0.480 Sum_probs=28.9
Q ss_pred cCccccCCCCCCeEEccCCCCce-EEEecccccccCHHH
Q 002031 285 DGFFNGDPHPGNFLVSKDPPHRP-ILLDFGLTKKLSSSM 322 (977)
Q Consensus 285 ~G~~H~D~hPgNIlv~~~~~g~i-~LiDFG~~~~l~~~~ 322 (977)
..++|+|+||+|||++++ +++ .||||+++..=++..
T Consensus 185 ~~lvHGD~~~~Nilv~~~--~~~~gviDWe~a~iGDPa~ 221 (276)
T cd05152 185 TVLVHGDLHPGHILIDED--ARVTGLIDWTEAKVGDPAR 221 (276)
T ss_pred CeeEeCCCCCCcEEEeCC--CCEEEEECcHhcccCCHHH
Confidence 468999999999999853 565 699999988766543
|
MPH2' is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). MPH2' catalyzes the transfer of the gamma-phosphoryl group from ATP to the 2'-hydroxyl of macrolide antibiotics such as erythromycin, clarithromycin, and azithromycin, among others. Macrolides penetrate the bacterial cell and bind to ribosomes, where it interrupts protein elongation, leading ultimately to the demise of the bacterium. Phosphorylation of macrolides leads to their inactivation. Based on substrate specificity and amino acid sequence, MPH2' is divided into types I and II, encoded by mphA and mphB genes, respectively. MPH2'I inactivates 14-membered ring macrolides while MPH2'II inactivates both 14- and 16-membered ring macrolides. Enzymatic inactivation of macrolides has been reported |
| >cd05156 ChoK_euk Choline Kinase (ChoK) in eukaryotes | Back alignment and domain information |
|---|
Probab=97.63 E-value=0.00029 Score=78.66 Aligned_cols=37 Identities=22% Similarity=0.299 Sum_probs=29.3
Q ss_pred hcCccccCCCCCCeEEccC--CCCceEEEecccccccCH
Q 002031 284 VDGFFNGDPHPGNFLVSKD--PPHRPILLDFGLTKKLSS 320 (977)
Q Consensus 284 ~~G~~H~D~hPgNIlv~~~--~~g~i~LiDFG~~~~l~~ 320 (977)
..++.|+|+||+|||++.+ .++.+.||||..++.-++
T Consensus 178 ~~~lcH~Dl~~~Nil~~~~~~~~~~i~lIDwEya~~~~p 216 (302)
T cd05156 178 PVVFCHNDLQEGNILLLNPSSETKKLVLIDFEYASYNYR 216 (302)
T ss_pred CceEEecCCCcCeEEecCCCCCCCcEEEEeeCCCCCCCc
Confidence 3578999999999999842 026799999999886544
|
The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC) and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. ChoK plays an important role in cell signaling pathways and the regulation of cell growth. Along with PCho, it is involved in malignant transformation through Ras oncogenes in various human cancer |
| >PLN02876 acyl-CoA dehydrogenase | Back alignment and domain information |
|---|
Probab=97.61 E-value=0.00039 Score=88.30 Aligned_cols=107 Identities=13% Similarity=0.160 Sum_probs=67.8
Q ss_pred CCCHHHHHHHHHHHhCCChhhcccccCccccccccccEEEEEEecCC---CEEEEEEecCChhhhhHhhHHHHHHHHHHH
Q 002031 96 PRPVQEVSQTIEREFGESMGGMFMDFVETPLATASIAQVHRATLVDG---RQVVVKVQHQGIKTIILEDLKNAKSIVDWI 172 (977)
Q Consensus 96 ~~~~~~v~~~l~~elg~~~~~~f~~~d~~piasaSigqV~~A~l~~G---~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~ 172 (977)
+++.+.+...+.+.++. +..-...+.-++++.|....+|+.+..+| ..+++|...++....
T Consensus 17 ~~d~~~l~~~l~~~~~~-~~~~~~~~~v~~l~gG~sn~ty~l~~~~~~~~~~~VLR~~p~~~~~~--------------- 80 (822)
T PLN02876 17 RFDEDALLRYAAANVAG-FPVPPSTFKVSQFGHGQSNPTFLLEVGNGGSVKRYVLRKKPPGKLLQ--------------- 80 (822)
T ss_pred cCCHHHHHHHHHHhCCC-cCCCccceeEEEeCCCCcCceEEEEECCCCcceeEEEEeCCCCccCc---------------
Confidence 36677777777766532 11111123457899999999999887554 478888765542100
Q ss_pred HhhCCCCCCchhHHHHhhhcccccCcHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeee-c------CCceEE
Q 002031 173 AWAEPQYDFNPIIDEWCKEAPKELDFNSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-S------SETVLI 245 (977)
Q Consensus 173 ~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~------~~~vLV 245 (977)
...++.+|++.+..+.. ...+.||+++. | +..++|
T Consensus 81 ---------------------~~~~~~rE~~~l~~L~~-----------------~~~vpVP~v~~~~~d~~v~G~~flV 122 (822)
T PLN02876 81 ---------------------SAHAVEREYQVLRALGE-----------------HTDVPVPKVYCLCTDASVIGTAFYI 122 (822)
T ss_pred ---------------------cHHHHHHHHHHHHHHhh-----------------cCCCCCCcEEEEecCCCcCCCceEE
Confidence 01135567777777643 12578899885 3 346899
Q ss_pred eeccCCCCCCC
Q 002031 246 LEFMDGIRLND 256 (977)
Q Consensus 246 mE~i~G~~L~~ 256 (977)
|||++|..+.+
T Consensus 123 ME~v~G~~~~~ 133 (822)
T PLN02876 123 MEYLEGRIFVD 133 (822)
T ss_pred EEecCCcccCC
Confidence 99999987643
|
|
| >PRK09902 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=97.59 E-value=0.00066 Score=70.80 Aligned_cols=146 Identities=14% Similarity=0.164 Sum_probs=93.0
Q ss_pred ccCccccccccccEEEEEEecCCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCcH
Q 002031 120 DFVETPLATASIAQVHRATLVDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFN 199 (977)
Q Consensus 120 ~~d~~piasaSigqV~~A~l~~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~ 199 (977)
.+|+---+.|+.+.|++-.+ +|+.+=||-|.-.+...+. .| .-+--|.
T Consensus 20 wve~pN~~rgG~SgV~r~~~-~g~~~ylKrq~nhl~~s~r----------------~P---------------~g~ptf~ 67 (216)
T PRK09902 20 WVEEPNYRRNGMSGVQCVER-NGKKLYVKRMTHHLFHSVR----------------YP---------------FGRPTIV 67 (216)
T ss_pred eecCCCcCCCCcceEEEEEe-CCcEEEEEeccCccccccc----------------CC---------------CCchHHH
Confidence 44444446699999999876 6678889966422221110 01 0233567
Q ss_pred HHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeeec--------CCceEEeeccCC-CCCCChHHHHhcCC---CH
Q 002031 200 SEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQS--------SETVLILEFMDG-IRLNDCESLEAFGV---NK 267 (977)
Q Consensus 200 ~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~~--------~~~vLVmE~i~G-~~L~~~~~~~~~~~---~~ 267 (977)
+|..++.++.+. ++.||++..+ -+.+||+|-++| .+|.++. ..... +.
T Consensus 68 rE~~~L~~L~~~------------------GvPVP~pvf~~~~k~~~~~rA~LVTe~L~g~~~L~~~l--~~~~~~~~~~ 127 (216)
T PRK09902 68 REVAVIKELERA------------------GVIVPKIVFGEAVKIEGEWRALLVTEDMAGFISIADWY--AQHAVSPYSD 127 (216)
T ss_pred HHHHHHHHHHHc------------------CCCCCccceeeeeccCCceEEEEEEEeCCCCccHHHHH--hcCCcCCcch
Confidence 788899988762 4557776641 236899999976 4554442 22112 11
Q ss_pred ---HHHHHHHHHHHHHHHHhcCccccCCCCCCeEEccCCCCceEEEeccccccc
Q 002031 268 ---QKVVEEITRAYAHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKL 318 (977)
Q Consensus 268 ---~~l~~~l~~~~l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l 318 (977)
..+...+.+ .+.++|..|+.|+||-+-||+++.++.-++.||||--++..
T Consensus 128 ~~k~~il~~va~-~ia~LH~~Gv~Hgdly~khIll~~~g~~~v~lIDlEk~r~~ 180 (216)
T PRK09902 128 EVRQAMLKAVAL-AFKKMHSVNRQHGCCYVRHIYVKTEGKAEAGFLDLEKSRRR 180 (216)
T ss_pred HHHHHHHHHHHH-HHHHHHHCCCcCCCCCHhheeecCCCCeeEEEEEhhccchh
Confidence 233443333 37889999999999999999998552224999999766543
|
|
| >PF00768 Peptidase_S11: D-alanyl-D-alanine carboxypeptidase This is family S11 in the peptidase classification | Back alignment and domain information |
|---|
Probab=97.57 E-value=0.00052 Score=73.85 Aligned_cols=55 Identities=25% Similarity=0.357 Sum_probs=43.1
Q ss_pred CccceEEEEE--ecCeeEEEeeccccCCCCCCCCCCCCcceeecchHHHHHHHHHHHHHCCCcCcCCchh
Q 002031 494 KILGIQVCAY--KDGEVIIDTSAGMLGRYDPRPVQPDSLFPVFSVTKGITAGMLHWLVDNGKLKLEENIA 561 (977)
Q Consensus 494 ~~pG~svaVv--~~g~~v~~~~~G~~~~~~~~~~t~~T~f~i~SiTK~~ta~~v~~lv~~G~l~ld~~v~ 561 (977)
.+.+-+..|+ ..|+++|++ +++..+++||+||.+|+.+++..+++|+|+++++|.
T Consensus 8 ~~~a~saiv~d~~tG~iL~~k-------------n~~~~~~~ASlTKlmTa~~~le~~~~~~l~~~~~v~ 64 (240)
T PF00768_consen 8 EISAKSAIVMDADTGKILYSK-------------NADEKRPPASLTKLMTAYVVLEAIKNGKLSLDDKVT 64 (240)
T ss_dssp --SSSEEEEEETTTSEEEEEE-------------STTSEBE-GGGHHHHHHHHHHHHHHTTSSTTTCEEE
T ss_pred CccceEEEEEECCCCcChhhc-------------ccCceechhhHHHHHHHHHHHHHHHcCCCCcccccc
Confidence 4455566666 468998863 457789999999999999999999999999999764
|
; InterPro: IPR001967 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S11 (D-Ala-D-Ala carboxypeptidase A family, clan SE). The protein fold of the peptidase domain for members of this family resembles that of D-Ala-D-Ala-carboxypeptidase B, the type example for clan SE. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endo-peptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S27) of serine protease have been identified, these being grouped into 6 clans (SA, SB, SC, SE, SF and SG) on the basis of structural similarity and other functional evidence. Structures are known for four of the clans (SA, SB, SC and SE): these appear to be totally unrelated, suggesting at least four evolutionary origins of serine peptidases and possibly many more []. Not with standing their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C clans have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (SA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. Bacterial cell walls are complex structures containing amino acids and amino sugars, with alternating chains of N-acetylglucosamine and N-acetyl-muramic acid units linked by short peptides []: the link peptide in Escherichia coli is L-alanyl-D-isoglutamyl-L-meso-diaminopimelyl-D-alanine. The chains are usually cross-linked between the carboxyl of D-alanine and the free amino group of diaminopimelate. During the synthesis of peptidoglycan, the precursor has the described tetramer sequence with an added C-terminal D-alanine []. D-Ala-D-Ala carboxypeptidase A is involved in the metabolism of cell components []; it is synthesised with a leader peptide to target it to the cell membrane []. After cleavage of the leader peptide, the enzyme is retained in the membrane by a C-terminal anchor. There are three families of serine-type D-Ala-D-Ala peptidase, which are also known as low molecular weight penicillin-binding proteins. Family S11 contains only D-Ala-D-Ala peptidases, unlike families S12 and S13, which contain other enzymes, such as class C beta-lactamases and D-amino-peptidases []. Although these enzymes are serine proteases, some members of family S11 are partially inhibited by thiol-blocking agents [].; GO: 0009002 serine-type D-Ala-D-Ala carboxypeptidase activity, 0006508 proteolysis; PDB: 2BCF_A 1TVF_A 3MFD_B 1ES3_A 1ESI_A 1ES4_A 1ES2_A 1SKF_A 1ES5_A 1J9M_A .... |
| >TIGR01767 MTRK 5-methylthioribose kinase | Back alignment and domain information |
|---|
Probab=97.55 E-value=0.00062 Score=76.67 Aligned_cols=50 Identities=24% Similarity=0.390 Sum_probs=35.8
Q ss_pred cCccccCCCCCCeEEccCCCCceEEEecccccccC--HHHHHHHHHHHHHHHcCC
Q 002031 285 DGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS--SSMKQALAKMFFAAAEGD 337 (977)
Q Consensus 285 ~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~--~~~r~~~~~l~~a~~~~d 337 (977)
..++|+|+||||||++++ .+++|||-++..=+ -+.=.-+.+|+.+.+.++
T Consensus 192 ~~llHGDl~~gNi~~~~~---~~~~iD~e~~~~G~~~~Dlg~~ianL~l~~~~~~ 243 (370)
T TIGR01767 192 ETLLHGDLHSGSIFVSEH---ETKVIDPEFAFYGPIGFDIGQFIANLFLNALSRD 243 (370)
T ss_pred ceeeeccCCcccEEEcCC---CCEEEcCcccccCchHhhHHHHHHHHHHHHhCcc
Confidence 578999999999999744 58899997554333 333445667887766554
|
This enzyme is involved in the methionine salvage pathway in certain bacteria. |
| >COG2334 Putative homoserine kinase type II (protein kinase fold) [General function prediction only] | Back alignment and domain information |
|---|
Probab=97.46 E-value=0.0012 Score=74.16 Aligned_cols=41 Identities=22% Similarity=0.229 Sum_probs=29.5
Q ss_pred ccccccccccEEEEEEecCCCEEEEEEecCC-hhhhhHhhHHHH
Q 002031 123 ETPLATASIAQVHRATLVDGRQVVVKVQHQG-IKTIILEDLKNA 165 (977)
Q Consensus 123 ~~piasaSigqV~~A~l~~G~~VAVKv~~p~-i~~~~~~Dl~~l 165 (977)
..++++ +-..||+....+|+. ++||-+|+ .+..+..++..+
T Consensus 31 ~~~l~s-~eN~~f~~~~~~g~~-iLki~~~~~~~~~i~~el~~l 72 (331)
T COG2334 31 LRGLNS-EENSNFRVQTEDGRY-ILKIYRPGWTRAEIPFELALL 72 (331)
T ss_pred cccccc-ccCceEEEEecCCCe-EEEEecCCCCHHHHHHHHHHH
Confidence 357777 888999999888877 99999998 333444444433
|
|
| >TIGR00938 thrB_alt homoserine kinase, Neisseria type | Back alignment and domain information |
|---|
Probab=97.45 E-value=0.0012 Score=73.99 Aligned_cols=32 Identities=25% Similarity=0.336 Sum_probs=27.2
Q ss_pred cCccccCCCCCCeEEccCCCCceEEEeccccccc
Q 002031 285 DGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKL 318 (977)
Q Consensus 285 ~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l 318 (977)
.+++|+|+|++||+++.+ +...+|||+.+..=
T Consensus 187 ~~l~HgD~~~~Nvl~~~~--~~~~vIDfd~~~~~ 218 (307)
T TIGR00938 187 RGVIHADLFPDNVLFDGD--SVKGVIDFYFACTD 218 (307)
T ss_pred CccCCCCCCcCcEEEECC--ceEEEeecccccCc
Confidence 799999999999999854 55689999998654
|
Homoserine kinase is required in the biosynthesis of threonine from aspartate.The member of this family from Pseudomonas aeruginosa was shown by direct assay and complementation to act specifically as a homoserine kinase. |
| >PRK10001 D-alanyl-D-alanine carboxypeptidase fraction C; Provisional | Back alignment and domain information |
|---|
Probab=97.42 E-value=0.00058 Score=78.45 Aligned_cols=45 Identities=22% Similarity=0.303 Sum_probs=38.7
Q ss_pred ecCeeEEEeeccccCCCCCCCCCCCCcceeecchHHHHHHHHHHHHHCCCcCcCCchh
Q 002031 504 KDGEVIIDTSAGMLGRYDPRPVQPDSLFPVFSVTKGITAGMLHWLVDNGKLKLEENIA 561 (977)
Q Consensus 504 ~~g~~v~~~~~G~~~~~~~~~~t~~T~f~i~SiTK~~ta~~v~~lv~~G~l~ld~~v~ 561 (977)
..|+++|++ +++..+++||+||.+|+.+++..+++|+++||+.|.
T Consensus 48 ~TG~vL~~k-------------nad~~~~pAS~TKlMTa~v~~e~i~~g~l~ldd~v~ 92 (400)
T PRK10001 48 ASGKVLAEG-------------NADEKLDPASLTKIMTSYVVGQALKADKIKLTDMVT 92 (400)
T ss_pred CCCcChhhc-------------CcCCCcCchHHHHHHHHHHHHHHHHcCCCCCCCEEE
Confidence 568888753 456779999999999999999999999999999763
|
|
| >COG3001 Uncharacterized protein conserved in bacteria [Function unknown] | Back alignment and domain information |
|---|
Probab=97.40 E-value=0.0022 Score=66.85 Aligned_cols=94 Identities=20% Similarity=0.327 Sum_probs=67.5
Q ss_pred HHHHHHHHHHHhCCChhhcccccCccccccccccEEEEEEecCCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCC
Q 002031 99 VQEVSQTIEREFGESMGGMFMDFVETPLATASIAQVHRATLVDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQ 178 (977)
Q Consensus 99 ~~~v~~~l~~elg~~~~~~f~~~d~~piasaSigqV~~A~l~~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~ 178 (977)
|..|.+++.+.+|.. ++ -+.+++.-|.|-+.|+... +..++-||+......
T Consensus 2 w~~i~~qlse~~g~~--~i---~er~~v~gG~inea~~v~d-g~~~~FvK~n~~~~~----------------------- 52 (286)
T COG3001 2 WQAISQQLSEQLGEG--EI---KEREEVSGGDINEAWRLRD-GTDPFFVKCNQREQL----------------------- 52 (286)
T ss_pred hHHHHHHHHHHhCch--hh---hcccccCCccccceeEeec-CCcceEEEecchhhH-----------------------
Confidence 677888888999876 32 2346788888888887764 457899997542111
Q ss_pred CCCchhHHHHhhhcccccCcHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeee----cCCceEEeeccCCCCC
Q 002031 179 YDFNPIIDEWCKEAPKELDFNSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ----SSETVLILEFMDGIRL 254 (977)
Q Consensus 179 ~~~~~~~~e~~~~l~~Eld~~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~----~~~~vLVmE~i~G~~L 254 (977)
--|..|+..++.+.+. ..+.||+|+. .+..+|||||++-.++
T Consensus 53 -----------------~~f~AEa~gL~~la~s-----------------~ti~VP~vi~~G~~~~~sylVle~L~~~~~ 98 (286)
T COG3001 53 -----------------SMFTAEADGLELLARS-----------------NTITVPKVIAVGASRDHSYLVLEYLPTGPL 98 (286)
T ss_pred -----------------HHHHHHHHHHHHHHhc-----------------CCccccceEEecCCCCeeEEEEeeccCCCC
Confidence 1256788888887752 3589999996 3556999999997777
Q ss_pred C
Q 002031 255 N 255 (977)
Q Consensus 255 ~ 255 (977)
+
T Consensus 99 d 99 (286)
T COG3001 99 D 99 (286)
T ss_pred C
Confidence 6
|
|
| >PRK06149 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=97.37 E-value=0.0012 Score=85.18 Aligned_cols=59 Identities=17% Similarity=0.229 Sum_probs=43.5
Q ss_pred HHHHHhCCCCCCHHHHHHHHHHHhCCChhhcccccCccccccccccEEEEEEecCCCEEEEEEecCCh
Q 002031 87 LKQLQDSLPPRPVQEVSQTIEREFGESMGGMFMDFVETPLATASIAQVHRATLVDGRQVVVKVQHQGI 154 (977)
Q Consensus 87 L~~Lqd~~p~~~~~~v~~~l~~elg~~~~~~f~~~d~~piasaSigqV~~A~l~~G~~VAVKv~~p~i 154 (977)
+..+....|.++.+++++++++.+|-. .+ -+++++..- ++|+.+..+ ..+++||-+|..
T Consensus 7 ~~~~~~~~p~ls~~~~~~ll~~~ygl~-~~------~~~L~s~~d-~nf~v~t~~-~~yVLKi~~~~~ 65 (972)
T PRK06149 7 IDRSSLPAPDVSEAQAERILAEHYGLS-GT------LTELGSQQD-RNFRVDSDG-GRFVLKICHAAY 65 (972)
T ss_pred hccCCCCCCCCCHHHHHHHHHHhcCCc-eE------EEecCCcCc-ceEEEEecC-CcEEEEeCCccC
Confidence 455667789999999999999999854 11 246665554 789887655 467889988754
|
|
| >PRK11397 dacD D-alanyl-D-alanine carboxypeptidase; Provisional | Back alignment and domain information |
|---|
Probab=97.34 E-value=0.00051 Score=78.58 Aligned_cols=44 Identities=14% Similarity=0.209 Sum_probs=38.0
Q ss_pred ecCeeEEEeeccccCCCCCCCCCCCCcceeecchHHHHHHHHHHHHHCCCcCcCCch
Q 002031 504 KDGEVIIDTSAGMLGRYDPRPVQPDSLFPVFSVTKGITAGMLHWLVDNGKLKLEENI 560 (977)
Q Consensus 504 ~~g~~v~~~~~G~~~~~~~~~~t~~T~f~i~SiTK~~ta~~v~~lv~~G~l~ld~~v 560 (977)
..|+++|++ +++..+++||+||.+|+.+++..+++|+++||+.|
T Consensus 45 ~tG~vL~~k-------------n~d~~~~pASlTKlMTa~lv~eai~~g~l~ld~~v 88 (388)
T PRK11397 45 TTGQILTAG-------------NEHQQRNPASLTKLMTGYVVDRAIDSHRITPDDIV 88 (388)
T ss_pred CCCcChhhc-------------CcCCCcCCHHHHHHHHHHHHHHHHHcCCCCCCCEE
Confidence 568888753 45677899999999999999999999999999975
|
|
| >PLN02236 choline kinase | Back alignment and domain information |
|---|
Probab=97.29 E-value=0.0023 Score=72.89 Aligned_cols=161 Identities=16% Similarity=0.250 Sum_probs=94.0
Q ss_pred HHHHHHHHHhCCChhhc--ccccCccccccccccEEEEEEecC-----CCEEEEEEecCChhhhhHhhHHHHHHHHHHHH
Q 002031 101 EVSQTIEREFGESMGGM--FMDFVETPLATASIAQVHRATLVD-----GRQVVVKVQHQGIKTIILEDLKNAKSIVDWIA 173 (977)
Q Consensus 101 ~v~~~l~~elg~~~~~~--f~~~d~~piasaSigqV~~A~l~~-----G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~ 173 (977)
.+.+++.+ ++..|.++ -+.++-+|+..|-.-++|+....+ ++.|++|+-.++...
T Consensus 18 ~~~~~~~~-~~~~w~~~~~~~~~~i~~l~gGlTN~~y~v~~~~~~~~~~~~~v~Ri~g~~t~~----------------- 79 (344)
T PLN02236 18 ELKRILHS-LASKWGDVVDDEALQVIPLKGAMTNEVFQIKWPTKEGNLGRKVLVRIYGEGVEL----------------- 79 (344)
T ss_pred HHHHHHHH-hcchhcCCCCcCcEEEEEcCCcccceeEEEEeCCCCCCCCCeEEEEEccCCCCe-----------------
Confidence 34455554 55556543 235566788888999999987532 478999987665321
Q ss_pred hhCCCCCCchhHHHHhhhcccccCcHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeeecCCceEEeeccCCCC
Q 002031 174 WAEPQYDFNPIIDEWCKEAPKELDFNSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQSSETVLILEFMDGIR 253 (977)
Q Consensus 174 ~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~~~~~vLVmE~i~G~~ 253 (977)
-+|-.+|.+++..+.+. ++ -|+++.....-.|+||++|.+
T Consensus 80 ---------------------~idR~~E~~~~~~l~~~------------------gl-~P~~~~~~~~g~v~efi~g~~ 119 (344)
T PLN02236 80 ---------------------FFDRDDEIRTFECMSRH------------------GQ-GPRLLGRFPNGRVEEFIHART 119 (344)
T ss_pred ---------------------eechHHHHHHHHHHHHc------------------CC-CCceEEEECCceEEEeeCCCC
Confidence 12445677777776541 12 456655333447899999988
Q ss_pred CCChH--------H-------HHhcC------CCH-HHHHHHH-------------------HHHH---HHHHH-----h
Q 002031 254 LNDCE--------S-------LEAFG------VNK-QKVVEEI-------------------TRAY---AHQIY-----V 284 (977)
Q Consensus 254 L~~~~--------~-------~~~~~------~~~-~~l~~~l-------------------~~~~---l~~i~-----~ 284 (977)
+.... . +.... .+. .++...+ ++.. ++..+ .
T Consensus 120 l~~~~l~~~~~~~~ia~~L~~lH~~~~~~~~~~~~~~~i~~~~~~~~~l~~~~~~~~~~~~~l~~~~~~L~~~~~~~~~~ 199 (344)
T PLN02236 120 LSAADLRDPEISALIAAKLREFHSLDMPGPKNVLLWDRLRNWLKEAKNLCSPEEAKEFRLDSLEDEINLLEKELSGDDQE 199 (344)
T ss_pred CCHHHcCChHHHHHHHHHHHHHhCCCCCCCCCchHHHHHHHHHHHHHhhcCcchhhhcCHHHHHHHHHHHHHHhcccCCC
Confidence 76321 0 00000 010 1111000 0000 11111 2
Q ss_pred cCccccCCCCCCeEEccCCCCceEEEecccccccCH
Q 002031 285 DGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 320 (977)
Q Consensus 285 ~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 320 (977)
..+.|+|+|++|||++++ ++.+.||||..++.-++
T Consensus 200 ~~~cH~Dl~~~Nil~~~~-~~~~~lID~Eya~~~~~ 234 (344)
T PLN02236 200 IGFCHNDLQYGNIMIDEE-TRAITIIDYEYASYNPV 234 (344)
T ss_pred ceEEeCCCCcCcEEEeCC-CCcEEEEeehhccccch
Confidence 478999999999999853 36799999999886544
|
|
| >PF10707 YrbL-PhoP_reg: PhoP regulatory network protein YrbL; InterPro: IPR019647 This entry represents proteins that are activated by the protein PhoP | Back alignment and domain information |
|---|
Probab=97.21 E-value=0.0056 Score=63.79 Aligned_cols=155 Identities=16% Similarity=0.151 Sum_probs=90.4
Q ss_pred ccccccccccEEEEEEecCCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCcHHHH
Q 002031 123 ETPLATASIAQVHRATLVDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (977)
Q Consensus 123 ~~piasaSigqV~~A~l~~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea 202 (977)
..+||+|+-=-||. +++....+|||.+|+........-..+++ ..+... . -++++|.
T Consensus 6 ~~~i~~G~~R~cy~--HP~dp~~cIKV~~~~~~~~~~~~~~~~k~-------~~~~~~----~----------~~~~~E~ 62 (199)
T PF10707_consen 6 SDLIAQGGERDCYQ--HPDDPNLCIKVMRPDRGERRRPFKRWLKR-------LRPKSR----Y----------RQNRREL 62 (199)
T ss_pred CcccccCCCceEEE--CCCCCCeEEEEEccccccccccchhHHHh-------hcccch----h----------HHHHHHH
Confidence 46899999866665 35677899999998761111100011111 111100 1 1234455
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeee--c--CCceEEeeccC---CC---CCCChHHHHhcCCCHHHHHH
Q 002031 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ--S--SETVLILEFMD---GI---RLNDCESLEAFGVNKQKVVE 272 (977)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~--~--~~~vLVmE~i~---G~---~L~~~~~~~~~~~~~~~l~~ 272 (977)
.....+.. . .+.....+|++|. . -..-+|+|.+. |. +|.++ +...+++. ...
T Consensus 63 ~~y~~l~~--~------------~~~~~~~i~r~~G~veT~~G~Glv~e~I~d~dG~~s~TL~~~--l~~~~~~~--~~~ 124 (199)
T PF10707_consen 63 RYYKQLSL--R------------RGVDWSHIPRFYGFVETNLGLGLVVELIRDADGNISPTLEDY--LKEGGLTE--ELR 124 (199)
T ss_pred HHHHHHhh--c------------cCCcccccccEeEEEecCCceEEEEEEEECCCCCcCccHHHH--HHcCCccH--HHH
Confidence 54444431 1 1344678999885 2 33468888873 32 22222 23334444 445
Q ss_pred HHHHHHHHHHHhcCccccCCCCCCeEEccCCCC--ceEEEe-ccccccc
Q 002031 273 EITRAYAHQIYVDGFFNGDPHPGNFLVSKDPPH--RPILLD-FGLTKKL 318 (977)
Q Consensus 273 ~l~~~~l~~i~~~G~~H~D~hPgNIlv~~~~~g--~i~LiD-FG~~~~l 318 (977)
.+++-+.+.++.++|+.+|++|+||++....++ +++||| ||....+
T Consensus 125 ~~L~~f~~~l~~~~Iv~~dl~~~NIv~~~~~~~~~~lvlIDG~G~~~~i 173 (199)
T PF10707_consen 125 QALDEFKRYLLDHHIVIRDLNPHNIVVQRRDSGEFRLVLIDGLGEKELI 173 (199)
T ss_pred HHHHHHHHHHHHcCCeecCCCcccEEEEecCCCceEEEEEeCCCCcccc
Confidence 566667888899999999999999999865433 589999 4655443
|
PhoP controls the expression of a large number of genes that mediate adaptation to low Mg2+ environments and/or virulence in several bacterial species. YbrL is proposed to be acting in a loop activity with PhoP and PrmA analogous to the multi-component loop in Salmonella sp., where the PhoP-dependent PmrD protein activates the regulatory protein PmrA, and the activated PmrA then represses transcription from the PmrD promoter which harbours binding sites for both the PhoP and PmrA proteins. Expression of YrbL is induced in low Mg2+ in a PhoP-dependent fashion and repressed by Fe3+ in a PmrA-dependent manner []. |
| >PRK10793 D-alanyl-D-alanine carboxypeptidase fraction A; Provisional | Back alignment and domain information |
|---|
Probab=97.19 E-value=0.0019 Score=74.49 Aligned_cols=50 Identities=20% Similarity=0.218 Sum_probs=41.3
Q ss_pred EEEEE--ecCeeEEEeeccccCCCCCCCCCCCCcceeecchHHHHHHHHHHHHHCCCcCcCCchh
Q 002031 499 QVCAY--KDGEVIIDTSAGMLGRYDPRPVQPDSLFPVFSVTKGITAGMLHWLVDNGKLKLEENIA 561 (977)
Q Consensus 499 svaVv--~~g~~v~~~~~G~~~~~~~~~~t~~T~f~i~SiTK~~ta~~v~~lv~~G~l~ld~~v~ 561 (977)
+..|+ ..|+++|++ +++..+.+||+||.+|+.+++..+++|+++||+.|.
T Consensus 48 sail~D~~tG~vL~~k-------------nad~~~~pASlTKlMTa~lvleai~~g~l~ld~~v~ 99 (403)
T PRK10793 48 SYILIDYNSGKVLAEQ-------------NADVRRDPASLTKMMTSYVIGQAMKAGKFKETDLVT 99 (403)
T ss_pred EEEEEECCCCcEehhc-------------CcCCCcCCHHHHHHHHHHHHHHHHHcCCCCCCCEEE
Confidence 34444 568888753 457788999999999999999999999999999874
|
|
| >PRK11768 serine/threonine protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=97.14 E-value=0.0062 Score=68.85 Aligned_cols=54 Identities=20% Similarity=0.170 Sum_probs=35.3
Q ss_pred CCCCCHHHHHHHHHHHhCCChhhcccccCccccccccccEEEEEEecCCCEEEEEEecCCh
Q 002031 94 LPPRPVQEVSQTIEREFGESMGGMFMDFVETPLATASIAQVHRATLVDGRQVVVKVQHQGI 154 (977)
Q Consensus 94 ~p~~~~~~v~~~l~~elg~~~~~~f~~~d~~piasaSigqV~~A~l~~G~~VAVKv~~p~i 154 (977)
.+..+.+.+...++.- |-..... ..++ .+.-.+||+....+|+.+++|+-+|+-
T Consensus 8 ~~~l~p~~~~~a~~~~-g~~~~~~-----~~~l-~s~eN~vy~v~~~~~~~~vlKv~r~~~ 61 (325)
T PRK11768 8 FQTLTPDLILDALESL-GLRVDGR-----LLAL-NSYENRVYQFGDEDGRRVVAKFYRPER 61 (325)
T ss_pred CCCCChHHHHHHHHHc-CCCCccc-----eEee-ccccceEEEEecCCCCEEEEEEcCccc
Confidence 4556667777777654 5432221 1223 345678999988889999999988763
|
|
| >KOG4158 consensus BRPK/PTEN-induced protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=96.80 E-value=0.0016 Score=72.11 Aligned_cols=73 Identities=14% Similarity=0.131 Sum_probs=46.2
Q ss_pred CceEEeeccCCCCCCChHHHHhcCCCHHHHHHHHHHHH--HHHHHhcCccccCCCCCCeEEccCCCC--ceEEEeccccc
Q 002031 241 ETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPH--RPILLDFGLTK 316 (977)
Q Consensus 241 ~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g--~i~LiDFG~~~ 316 (977)
.-+|||..-+ .+|..+. .....+...-.-.+.+.+ ..+++++|+-|||+|..|||+.-|+++ .+++.||||+-
T Consensus 317 tlylvMkrY~-~tLr~yl--~~~~~s~r~~~~~laQlLEav~hL~~hgvAhRDlKSDNiL~ElddD~~P~LVvaDFGCcL 393 (598)
T KOG4158|consen 317 TLYLVMKRYR-QTLREYL--WTRHRSYRTGRVILAQLLEAVTHLHKHGVAHRDLKSDNILLELDDDEIPQLVVADFGCCL 393 (598)
T ss_pred eEEEehhcch-hhHHHHH--hcCCCchHHHHHHHHHHHHHHHHHHHccchhhcccccceEEEecCCCCcEEEEcccceee
Confidence 3478887664 3444332 222222222222233332 678899999999999999999655443 68999999974
|
|
| >PRK11669 pbpG D-alanyl-D-alanine endopeptidase; Provisional | Back alignment and domain information |
|---|
Probab=96.79 E-value=0.0048 Score=68.31 Aligned_cols=46 Identities=30% Similarity=0.475 Sum_probs=35.7
Q ss_pred EEEEE--ecCeeEEEeeccccCCCCCCCCCCCCcceeecchHHHHHHHHHHHHHCCCcCcCCchh
Q 002031 499 QVCAY--KDGEVIIDTSAGMLGRYDPRPVQPDSLFPVFSVTKGITAGMLHWLVDNGKLKLEENIA 561 (977)
Q Consensus 499 svaVv--~~g~~v~~~~~G~~~~~~~~~~t~~T~f~i~SiTK~~ta~~v~~lv~~G~l~ld~~v~ 561 (977)
+..|+ ..|+++|++ +++..+++||+||.+|+.+++ +++++||++|.
T Consensus 43 aaiv~D~~tG~vL~~k-------------N~d~~~~pASlTKlmTalvvl----e~~l~ld~~v~ 90 (306)
T PRK11669 43 SAMVVDLNTNKVIYSS-------------NPDLVVPIASITKLMTAMVVL----DAKLPLDEKLK 90 (306)
T ss_pred EEEEEECCCCcEEEeE-------------CcCCCcCchHHHHHHHHHHHH----HcCCCCCCEEE
Confidence 34444 578888853 457889999999999999987 35889998774
|
|
| >COG3173 Predicted aminoglycoside phosphotransferase [General function prediction only] | Back alignment and domain information |
|---|
Probab=96.61 E-value=0.024 Score=63.18 Aligned_cols=36 Identities=22% Similarity=0.349 Sum_probs=30.2
Q ss_pred cCccccCCCCCCeEEccCCCCceEEEecccccccCHHH
Q 002031 285 DGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSSSM 322 (977)
Q Consensus 285 ~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~~~ 322 (977)
..++|+|.|+|||+++++ +.+.+|||+++..=++..
T Consensus 198 ~~lvHGD~~~gNlii~~~--~~~gVlDwe~~~lGDP~~ 233 (321)
T COG3173 198 PVLVHGDYRPGNLIIDPG--RPTGVLDWELATLGDPLE 233 (321)
T ss_pred ceeeeCCcccCCEEEeCC--CeeEEEeccccccCCcHH
Confidence 579999999999999965 559999999988766543
|
|
| >PLN02421 phosphotransferase, alcohol group as acceptor/kinase | Back alignment and domain information |
|---|
Probab=96.59 E-value=0.013 Score=66.28 Aligned_cols=33 Identities=21% Similarity=0.377 Sum_probs=27.8
Q ss_pred ccccCCCCCCeEEccCCCCceEEEecccccccCH
Q 002031 287 FFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 320 (977)
Q Consensus 287 ~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 320 (977)
+.|.|++|+|||++++ ++++.||||..++.-++
T Consensus 184 ~CHnDl~~~NiL~~~~-~~~l~lID~EYag~nd~ 216 (330)
T PLN02421 184 FAHNDLLSGNLMLNED-EGKLYFIDFEYGSYSYR 216 (330)
T ss_pred EEECCCCcccEEEeCC-CCcEEEEcccccCCCcc
Confidence 7999999999999743 36899999999886554
|
|
| >KOG1240 consensus Protein kinase containing WD40 repeats [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=96.41 E-value=0.0004 Score=85.41 Aligned_cols=46 Identities=24% Similarity=0.238 Sum_probs=34.7
Q ss_pred HHHHHHHHHHHHHHHHhcCccccCCCCCCeEEccCCCCceEEEeccccc
Q 002031 268 QKVVEEITRAYAHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTK 316 (977)
Q Consensus 268 ~~l~~~l~~~~l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~ 316 (977)
+.++-.++.+ +.|.|+.|+.|+|||-+||||+.= +=+.|.||..-+
T Consensus 123 kWiaFQLL~a-l~qcH~~gVcHGDIKsENILiTSW--NW~~LtDFAsFK 168 (1431)
T KOG1240|consen 123 KWIAFQLLKA-LSQCHKLGVCHGDIKSENILITSW--NWLYLTDFASFK 168 (1431)
T ss_pred HHHHHHHHHH-HHHHHHcCccccccccceEEEeee--chhhhhcccccC
Confidence 3444444443 889999999999999999999853 457788887644
|
|
| >KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=96.05 E-value=0.0061 Score=74.22 Aligned_cols=69 Identities=16% Similarity=0.201 Sum_probs=48.0
Q ss_pred eeccCCCCCCChHHHHhcCCCHHH---HHHHHHHHHHHHHHhcCccccCCCCCCeEEccCCCCceEEEecccccccC
Q 002031 246 LEFMDGIRLNDCESLEAFGVNKQK---VVEEITRAYAHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 319 (977)
Q Consensus 246 mE~i~G~~L~~~~~~~~~~~~~~~---l~~~l~~~~l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~ 319 (977)
||||++ .|..+.... ..+...+ +...++.- ++.+|..|+-|||+||.|+++... |.++++|||.+..+.
T Consensus 400 mE~~~~-Dlf~~~~~~-~~~~~~e~~c~fKqL~~G-v~y~h~~GiahrdlK~enll~~~~--g~lki~Dfg~~~vf~ 471 (601)
T KOG0590|consen 400 MEYCPY-DLFSLVMSN-GKLTPLEADCFFKQLLRG-VKYLHSMGLAHRDLKLENLLVTEN--GILKIIDFGAASVFR 471 (601)
T ss_pred hhcccH-HHHHHHhcc-cccchhhhhHHHHHHHHH-HHHHHhcCceeccCccccEEEecC--CceEEeecCcceeec
Confidence 999998 776553211 0122222 22222221 577889999999999999999966 899999999987653
|
|
| >PF04655 APH_6_hur: Aminoglycoside/hydroxyurea antibiotic resistance kinase; InterPro: IPR006748 The aminoglycosides are a large group of biologically active bacterial secondary metabolites, best known for their antibiotic properties [] | Back alignment and domain information |
|---|
Probab=95.97 E-value=0.02 Score=61.95 Aligned_cols=31 Identities=26% Similarity=0.244 Sum_probs=27.6
Q ss_pred cccccccccEEEEEEecCCCEEEEEEecCCh
Q 002031 124 TPLATASIAQVHRATLVDGRQVVVKVQHQGI 154 (977)
Q Consensus 124 ~piasaSigqV~~A~l~~G~~VAVKv~~p~i 154 (977)
.++..|+.+.|++++..+|+++++|+..|.-
T Consensus 8 ~~~~~g~~s~V~pv~~~dG~~avLKl~~p~~ 38 (253)
T PF04655_consen 8 GPPAHGSSSLVVPVRRADGTPAVLKLAPPHA 38 (253)
T ss_pred CCCCCCcceEEEEEEcCCCCeEEEEecCCcc
Confidence 4678899999999999999999999988753
|
Aminoglycoside phosphotransferases achieve inactivation of these enzymes by phosphorylation, utilising ATP. Likewise, hydroxyurea is inactivated by phosphorylation of the hydroxy group in the hydroxylamine moiety.; GO: 0016773 phosphotransferase activity, alcohol group as acceptor, 0006468 protein phosphorylation, 0019748 secondary metabolic process |
| >PF01633 Choline_kinase: Choline/ethanolamine kinase; InterPro: IPR002573 Choline kinase, (ATP:choline phosphotransferase, 2 | Back alignment and domain information |
|---|
Probab=95.85 E-value=0.023 Score=59.82 Aligned_cols=34 Identities=29% Similarity=0.404 Sum_probs=22.4
Q ss_pred cCccccCCCCCCeEE-ccCCCCceEEEecccccccCH
Q 002031 285 DGFFNGDPHPGNFLV-SKDPPHRPILLDFGLTKKLSS 320 (977)
Q Consensus 285 ~G~~H~D~hPgNIlv-~~~~~g~i~LiDFG~~~~l~~ 320 (977)
..+.|.|++|+|||+ +. ++++.||||-.++.-+.
T Consensus 143 ~v~cHnDl~~~Nil~~~~--~~~~~lIDfEya~~n~~ 177 (211)
T PF01633_consen 143 LVFCHNDLNPGNILINNK--DGEVKLIDFEYAGYNDR 177 (211)
T ss_dssp EEEE-S--SGGGEEETSS--SSCEEE--GTT-EEEEH
T ss_pred ceEeeccCccccEEeccC--CCeEEEecHHHHhhccc
Confidence 468999999999999 43 37999999998876543
|
7.1.32 from EC) belongs to the choline/ethanolamine kinase family. Ethanolamine and choline are major membrane phospholipids, in the form of glycerophosphoethanolamine and glycerophosphocholine. Ethanolamine is also a component of the glycosylphosphatidylinositol (GPI) anchor, which is necessary for cell-surface protein attachment []. The de novo synthesis of these phospholipids begins with the creation of phosphoethanolamine and phosphocholine by ethanolamine and choline kinases in the first step of the CDP-ethanolamine pathway [, ]. There are two putative choline/ethanolamine kinases (C/EKs) in the Trypanosoma brucei genome. Ethanolamine kinase has no choline kinase activity [] and its activity is inhibited by ADP []. Inositol supplementation represses ethanolamine kinase, decreasing the incorporation of ethanolamine into the CDP-ethanolamine pathway and into phosphatidylethanolamine and phosphatidylcholine []. ; GO: 0016773 phosphotransferase activity, alcohol group as acceptor; PDB: 3C5I_A 2IG7_A 3LQ3_A 3FEG_A 2QG7_E 3FI8_A 1NW1_A 3MES_A 3G15_A 2CKP_B .... |
| >PTZ00384 choline kinase; Provisional | Back alignment and domain information |
|---|
Probab=95.74 E-value=0.12 Score=59.67 Aligned_cols=102 Identities=18% Similarity=0.163 Sum_probs=63.1
Q ss_pred CCHHHHHHHHHHHhCCChhhc-ccccCccccccccccEEEEEEecCC--CE-----EEEEEecCChhhhhHhhHHHHHHH
Q 002031 97 RPVQEVSQTIEREFGESMGGM-FMDFVETPLATASIAQVHRATLVDG--RQ-----VVVKVQHQGIKTIILEDLKNAKSI 168 (977)
Q Consensus 97 ~~~~~v~~~l~~elg~~~~~~-f~~~d~~piasaSigqV~~A~l~~G--~~-----VAVKv~~p~i~~~~~~Dl~~l~~l 168 (977)
.....+++++.+..+ .|.++ -..++-+++..|--.++|++...++ .. |++++-..+..
T Consensus 29 ~~~~~~~~~~~~~~p-~w~~~~~~~i~i~~l~gGLTN~l~~v~~~~~~~~~~~~k~Vl~R~~g~~~~------------- 94 (383)
T PTZ00384 29 HSHSNLKSLCIRHVP-FWNNVNPEFIEIKKMNNGITNQVYQATLVDGDKDRYPIKSVCIKKSSTYNS------------- 94 (383)
T ss_pred ccHHHHHHHHHHHCC-ccccCCcccEEEEEeCCcccceEEEEEecCCCCCccccceEEEEeccCCCc-------------
Confidence 455677777776655 45433 1345567888899999999986433 22 44443111110
Q ss_pred HHHHHhhCCCCCCchhHHHHhhhcccccCcHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeeecCCceEEeec
Q 002031 169 VDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQSSETVLILEF 248 (977)
Q Consensus 169 ~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~~~~~vLVmE~ 248 (977)
.-+|-.+|.+....+.+. -.-|+++......++.||
T Consensus 95 -------------------------l~IdR~~E~~i~~~Ls~~-------------------glgP~l~~~f~~g~l~ef 130 (383)
T PTZ00384 95 -------------------------LVIDNDLQYNIAKLLGDN-------------------NFGPKIIGRFGDFTIQEW 130 (383)
T ss_pred -------------------------eEeccHHHHHHHHHHHhC-------------------CCCCeEEEecCCEEEEEE
Confidence 112445676666666541 235777776677899999
Q ss_pred cCCCCCCC
Q 002031 249 MDGIRLND 256 (977)
Q Consensus 249 i~G~~L~~ 256 (977)
++|.+++.
T Consensus 131 IeGr~l~~ 138 (383)
T PTZ00384 131 VEGNTMGI 138 (383)
T ss_pred eccccCCh
Confidence 99998864
|
|
| >PTZ00296 choline kinase; Provisional | Back alignment and domain information |
|---|
Probab=95.35 E-value=0.27 Score=57.86 Aligned_cols=114 Identities=12% Similarity=0.101 Sum_probs=70.5
Q ss_pred HHHHHHHHhC-CCCCCHHHHHHHHHHHhCCChhhc-ccccCccccccccccEEEEEEecC---------CCEEEEEEecC
Q 002031 84 ISLLKQLQDS-LPPRPVQEVSQTIEREFGESMGGM-FMDFVETPLATASIAQVHRATLVD---------GRQVVVKVQHQ 152 (977)
Q Consensus 84 ~~~L~~Lqd~-~p~~~~~~v~~~l~~elg~~~~~~-f~~~d~~piasaSigqV~~A~l~~---------G~~VAVKv~~p 152 (977)
.++|+.+... .+-...+.+..++.+..+ .|..+ -++++-+|+..|=--++|+.+..+ ++.|+|+|..+
T Consensus 70 ~~~l~~~~~~~~~~~~~~~~~~i~~~~vp-~W~~~~~~~I~i~~l~gGlTN~~f~v~~~~~~~~~~~~~~~~~lvRiyG~ 148 (442)
T PTZ00296 70 KNDIPLCAQEFSDLTDPLYIKKICLEKVP-EWRRFTEDDVRVNQILSGLTNQLFEVSLKEETANNYPSIRRRVLFRIYGK 148 (442)
T ss_pred hhhhhHHHHhhcccCChHHHHHHHHHHCC-ccccCCcccEEEEEecCcccCceEEEEecCCCCccccCcCceEEEEecCC
Confidence 3444444444 344455666666664443 24321 124566899889899999998642 46899998776
Q ss_pred ChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCcHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCeE
Q 002031 153 GIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVL 232 (977)
Q Consensus 153 ~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~ 232 (977)
+....+ |-..|..+...+.+. + .
T Consensus 149 ~te~lI--------------------------------------dR~~E~~v~~~ls~~-g------------------i 171 (442)
T PTZ00296 149 DVDELY--------------------------------------NPISEFEVYKTMSKY-R------------------I 171 (442)
T ss_pred Ccccee--------------------------------------CHHHHHHHHHHHHHC-C------------------C
Confidence 654222 344566676666541 1 2
Q ss_pred eceeeecCCceEEeeccCCCCCC
Q 002031 233 IPEVIQSSETVLILEFMDGIRLN 255 (977)
Q Consensus 233 vP~v~~~~~~vLVmE~i~G~~L~ 255 (977)
-|+++.....+.+.||++|.++.
T Consensus 172 ~P~l~~~f~gg~I~efi~g~~l~ 194 (442)
T PTZ00296 172 APQLLNTFSGGRIEEWLYGDPLR 194 (442)
T ss_pred CCceEEEeCCCEEEEeeCCccCC
Confidence 35555555678899999998665
|
|
| >KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only] | Back alignment and domain information |
|---|
Probab=95.15 E-value=0.01 Score=73.37 Aligned_cols=37 Identities=32% Similarity=0.479 Sum_probs=33.6
Q ss_pred HHHHHhcCccccCCCCCCeEEccCCCCceEEEecccccc
Q 002031 279 AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKK 317 (977)
Q Consensus 279 l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~ 317 (977)
++.+|..|++|||+||.|++|+.- |.|++.|||+.+.
T Consensus 156 ~Eylh~ygivhrdlkpdnllIT~m--GhiKlTDfgLsk~ 192 (1205)
T KOG0606|consen 156 VEYLHSYGIVHRDLKPDNLLITSM--GHIKLTDFGLSKK 192 (1205)
T ss_pred hHhhccCCeecCCCCCCcceeeec--ccccccchhhhhh
Confidence 778899999999999999999966 8999999998654
|
|
| >KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=94.90 E-value=0.04 Score=65.08 Aligned_cols=96 Identities=20% Similarity=0.136 Sum_probs=65.7
Q ss_pred cCCceEEeeccCCCCCCChHHHHhcCCCHHHHHHHHHHHH--HHHHHhcCccccCCCCCCeEEccCCCCceEEEeccccc
Q 002031 239 SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTK 316 (977)
Q Consensus 239 ~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~ 316 (977)
.++.+|+++|+.|..+-..... ..-++.......+++.. +.++|..|++|+|+|+.||+++.+ |.|++.|||..+
T Consensus 69 ~~kl~l~ld~~rgg~lft~l~~-~~~f~~~~~~~~~aelaLald~lh~l~iiyrd~k~enilld~~--Ghi~~tdfglsk 145 (612)
T KOG0603|consen 69 DGKLYLILDFLRGGDLFTRLSK-EVMFDELDVAFYLAELALALDHLHKLGIAYRDYKLENVLLLLE--GHIKLTDFGLSK 145 (612)
T ss_pred ccchhHhhhhcccchhhhcccc-CCchHHHHHHHHHHHHHHHHhhcchhHHHHhcccccceeeccc--CccccCCchhhh
Confidence 6778999999998666433211 11122222333333332 788899999999999999999966 899999999988
Q ss_pred ccCHHHHHHHHHHHHHHHcCCHHHHHHHHHH
Q 002031 317 KLSSSMKQALAKMFFAAAEGDHVALLSAFAE 347 (977)
Q Consensus 317 ~l~~~~r~~~~~l~~a~~~~d~~~~~~~~~~ 347 (977)
.+-+.... +++++-++..+..
T Consensus 146 e~v~~~~~----------cgt~eymApEI~~ 166 (612)
T KOG0603|consen 146 EAVKEKIA----------CGTYEYRAPEIIN 166 (612)
T ss_pred HhHhhhhc----------ccchhhhhhHhhh
Confidence 76554443 5666666655555
|
|
| >PRK10271 thiK thiamine kinase; Provisional | Back alignment and domain information |
|---|
Probab=94.59 E-value=0.027 Score=57.86 Aligned_cols=34 Identities=21% Similarity=0.195 Sum_probs=28.3
Q ss_pred cCccccCCCCCCeEEccCCCCceEEEecccccccCHH
Q 002031 285 DGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSSS 321 (977)
Q Consensus 285 ~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~~ 321 (977)
.-..|+|+||+||+++++ | ++||||+.++.-++.
T Consensus 77 ~~p~H~D~~~~N~~~~~~--~-~~lIDwe~a~~gDp~ 110 (188)
T PRK10271 77 LAPLHMDVHAGNLVHSAS--G-LRLIDWEYAGDGDIA 110 (188)
T ss_pred eeeecCCCCCccEEEECC--C-EEEEeCCcccCCCHH
Confidence 456999999999999743 4 999999999877663
|
|
| >KOG2269 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=94.56 E-value=0.15 Score=55.87 Aligned_cols=123 Identities=14% Similarity=0.205 Sum_probs=77.1
Q ss_pred HHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeeecCCceEEeeccCCCCCCChHHHHhcCCC---HHHHHHHHHH
Q 002031 200 SEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQSSETVLILEFMDGIRLNDCESLEAFGVN---KQKVVEEITR 276 (977)
Q Consensus 200 ~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~~~~~vLVmE~i~G~~L~~~~~~~~~~~~---~~~l~~~l~~ 276 (977)
+|..|+.|.+. .++.+|.|..-.++||||.|+.-.-+.. ..+....+. .......+..
T Consensus 334 kEmhNL~RMq~------------------~GlpcP~vV~lkkhvLVMsFiGd~~~aA-PkLK~v~l~d~E~~~aY~q~~~ 394 (531)
T KOG2269|consen 334 KEMHNLSRMQK------------------HGLPCPQVVKLKKHVLVMSFIGDQGLAA-PKLKNVELTDDERRNAYDQVQS 394 (531)
T ss_pred HHHHHHHHHHh------------------cCCCCCceeeeecceEEEEeecCCCCCC-ccccccccChHHHHHHHHHHHH
Confidence 56667777654 2566787777788999999994221111 011111111 2222333333
Q ss_pred HHHHHHHhcCccccCCCCCCeEEccCCCCceEEEecccccccCHHHHHHHHHHHHHHHcCCHHHHHHHHHHcCcc
Q 002031 277 AYAHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSSSMKQALAKMFFAAAEGDHVALLSAFAEMGLR 351 (977)
Q Consensus 277 ~~l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~~~r~~~~~l~~a~~~~d~~~~~~~~~~~g~~ 351 (977)
+..+..++.-+||+|+.--|+|... |++.+||-..+...+...-.. .+.+|...|...|...|..
T Consensus 395 ~M~~lY~Ec~LVHADlSEyN~Lw~~---gKvw~IDVsQsvep~HP~~Le-------FL~RDc~Ni~~FF~r~G~p 459 (531)
T KOG2269|consen 395 IMCRLYKECLLVHADLSEYNLLWTP---GKVWVIDVSQSVEPSHPRSLE-------FLTRDCQNIITFFTRIGTP 459 (531)
T ss_pred HHHHHHHhhheeecchhhhhheecC---CceEEEechhccCCCCcchhH-------HHHHHHHHHHHHHHhcCCC
Confidence 3344445678999999999999973 699999998776655433222 2346777788888888875
|
|
| >PF12260 PIP49_C: Protein-kinase domain of FAM69; InterPro: IPR022049 Family with sequence similarity 69 has three members (A, B and C) | Back alignment and domain information |
|---|
Probab=93.44 E-value=0.073 Score=55.11 Aligned_cols=85 Identities=18% Similarity=0.226 Sum_probs=55.7
Q ss_pred EeceeeecCCceEEeeccCCCCCCCh----HHHHhcC-CCHHHHHHHHHHHHHHHHHh---cCccccCCCCCCeEEccCC
Q 002031 232 LIPEVIQSSETVLILEFMDGIRLNDC----ESLEAFG-VNKQKVVEEITRAYAHQIYV---DGFFNGDPHPGNFLVSKDP 303 (977)
Q Consensus 232 ~vP~v~~~~~~vLVmE~i~G~~L~~~----~~~~~~~-~~~~~l~~~l~~~~l~~i~~---~G~~H~D~hPgNIlv~~~~ 303 (977)
++|+++.+..++.|+||+...++... ....... ..+.+++..++++. +.+.. ..+.-+|++|+|+-|+++
T Consensus 21 ~~pk~lG~CG~~~v~E~~~~~~~~~~~~~l~~~~~~~w~~R~~iA~~lL~~l-~~l~~~~~~~~~lcDv~~~nfgv~~~- 98 (188)
T PF12260_consen 21 PFPKLLGSCGRFYVVEYVGAGSLYGIYRPLSQFLQSPWEQRAKIALQLLELL-EELDHGPLGFFYLCDVSPDNFGVNDD- 98 (188)
T ss_pred CCCCeeeECCCEEEEEeecCccccccccccccccccCHHHHHHHHHHHHHHH-HHHhcCCCCcEEEeecchHHeEEeCC-
Confidence 89999986677889999987655311 0110000 11334455555543 33332 458889999999999965
Q ss_pred CCceEEEecccccccC
Q 002031 304 PHRPILLDFGLTKKLS 319 (977)
Q Consensus 304 ~g~i~LiDFG~~~~l~ 319 (977)
|+++++|...+...+
T Consensus 99 -~~lk~iDld~v~~~~ 113 (188)
T PF12260_consen 99 -GRLKLIDLDDVFVED 113 (188)
T ss_pred -CcEEEEechhcchhH
Confidence 899999999886553
|
Proteins in this uncharacterised family are described as transmembrane proteins. |
| >PF07914 DUF1679: Protein of unknown function (DUF1679); InterPro: IPR012877 This region is found in a number of Caenorhabditis elegans and Caenorhabditis briggsae proteins, in one case (Q19034 from SWISSPROT) as a repeat | Back alignment and domain information |
|---|
Probab=93.33 E-value=1.6 Score=51.06 Aligned_cols=34 Identities=24% Similarity=0.388 Sum_probs=26.2
Q ss_pred ccccCCCCCCeEEccCCCCc---eEEEecccccccCH
Q 002031 287 FFNGDPHPGNFLVSKDPPHR---PILLDFGLTKKLSS 320 (977)
Q Consensus 287 ~~H~D~hPgNIlv~~~~~g~---i~LiDFG~~~~l~~ 320 (977)
++|+|+...|||++.+++|. -.||||=++..-++
T Consensus 270 L~HGDLw~~NiLw~k~~~g~~~l~AIIDwQ~vh~G~~ 306 (414)
T PF07914_consen 270 LVHGDLWSSNILWDKDSDGKLKLKAIIDWQCVHRGSP 306 (414)
T ss_pred eecCCccHHheeeecCCchhHHHHHHHHHHHhhcCch
Confidence 69999999999999865553 35899977665443
|
In many of the family members, this region is associated with the CHK region described by SMART as being found in zinc finger-C4 and HLH domain-containing kinases. In fact, one member of this family (Q9GUC1 from SWISSPROT) is annotated as being a member of the nuclear hormone receptor family, and contains regions typical of such proteins (IPR000536 from INTERPRO, IPR008946 from INTERPRO, and IPR001628 from INTERPRO). |
| >COG5072 ALK1 Serine/threonine kinase of the haspin family [Cell division and chromosome partitioning] | Back alignment and domain information |
|---|
Probab=93.02 E-value=0.43 Score=53.49 Aligned_cols=65 Identities=20% Similarity=0.150 Sum_probs=42.9
Q ss_pred HHhCCCh-hhcccccCccccccccccEEEEEEecCCCEEEEEEecCChh-hhhHhhHHHHHHHHHHH
Q 002031 108 REFGESM-GGMFMDFVETPLATASIAQVHRATLVDGRQVVVKVQHQGIK-TIILEDLKNAKSIVDWI 172 (977)
Q Consensus 108 ~elg~~~-~~~f~~~d~~piasaSigqV~~A~l~~G~~VAVKv~~p~i~-~~~~~Dl~~l~~l~~~~ 172 (977)
+.-|++. .--+..++..|++.+..+-++.|++++...++=++..-+.+ .....|-.+++.+..+.
T Consensus 143 rrk~~~sQ~~ns~~kk~~pvpDqvs~dk~Q~k~~~stsl~~l~s~~~l~~n~~d~d~~nl~QI~q~~ 209 (488)
T COG5072 143 RRKGPFSQFVNSQTKKICPVPDQVSSDKIQAKLADSTSLVSLVSPFGLPGNAQDADVLNLVQILQWC 209 (488)
T ss_pred hccCCcchhccccccccccCcccchhhhhhhhhccCcceeeccccccCCCCccccchHHHHHHHHHh
Confidence 4555522 22355666789999999999999998888887776543322 23455666666666554
|
|
| >PF13095 FTA2: Kinetochore Sim4 complex subunit FTA2 | Back alignment and domain information |
|---|
Probab=92.87 E-value=1.1 Score=46.70 Aligned_cols=25 Identities=28% Similarity=0.379 Sum_probs=22.8
Q ss_pred cccccccc-cEEEEEEecCCCEEEEEE
Q 002031 124 TPLATASI-AQVHRATLVDGRQVVVKV 149 (977)
Q Consensus 124 ~piasaSi-gqV~~A~l~~G~~VAVKv 149 (977)
+-+|.|+- |.|++++. +|+.+|+|+
T Consensus 43 efLg~g~~~~~V~kv~I-~g~~YALKl 68 (207)
T PF13095_consen 43 EFLGHGSHDGYVFKVEI-DGRIYALKL 68 (207)
T ss_pred eecCCCCceeEEEEEEE-CCeEEEEEE
Confidence 56899999 99999997 789999999
|
|
Homologous Structure Templates
Structure Templates Detected by BLAST 
Original result of BLAST against Protein Data Bank
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() | |
| Query | 977 | ||||
| 3zyt_A | 372 | Structure Determination Of Esta From Arthrobacter N | 3e-17 | ||
| 2qmi_A | 447 | Structure Of The Octameric Penicillin-Binding Prote | 1e-12 | ||
| 1ci9_A | 392 | Dfp-Inhibited Esterase Estb From Burkholderia Gladi | 4e-12 | ||
| 1l0f_A | 358 | X-Ray Crystal Structure Of Ampc N152h Mutant Beta-L | 2e-08 | ||
| 1i5q_A | 358 | Crystal Structure Of The E. Coli Ampc Beta-Lactamas | 4e-08 | ||
| 3iwi_A | 361 | X-Ray Crystal Structure Of The Extended-Spectrum Am | 5e-08 | ||
| 3iwq_B | 358 | X-Ray Crystal Structure Of The Extended-Spectrum Am | 5e-08 | ||
| 2p9v_A | 358 | Structure Of Ampc Beta-Lactamase With Cross-Linked | 5e-08 | ||
| 1pi4_A | 358 | Structure Of N289a Mutant Of Ampc In Complex With S | 5e-08 | ||
| 1fsw_A | 358 | Ampc Beta-Lactamase From E. Coli Complexed With Inh | 5e-08 | ||
| 2ffy_B | 358 | Ampc Beta-Lactamase N289a Mutant In Complex With A | 6e-08 | ||
| 2bls_A | 358 | Ampc Beta-Lactamase From Escherichia Coli Length = | 6e-08 | ||
| 3ixd_A | 358 | X-Ray Crystal Structure Of The Extended-Spectrum Am | 6e-08 | ||
| 3iwo_A | 358 | X-Ray Crystal Structure Of The Extended-Spectrum Am | 6e-08 | ||
| 2wzx_A | 371 | Amp-C Beta-Lactamase (Pseudomonas Aeruginosa)in Com | 8e-08 | ||
| 3s1y_A | 371 | Amp-C Beta-Lactamase (Pseudomonas Aeruginosa) In Co | 9e-08 | ||
| 3fkv_A | 358 | Ampc K67r Mutant Complexed With Benzo(B)thiophene-2 | 1e-07 | ||
| 1l0e_A | 358 | X-Ray Crystal Structure Of Ampc K67q Mutant Beta-La | 1e-07 | ||
| 1kvl_A | 358 | X-Ray Crystal Structure Of Ampc S64g Mutant Beta-La | 2e-07 | ||
| 1l0d_A | 358 | X-Ray Crystal Structure Of Ampc S64d Mutant Beta-La | 2e-07 | ||
| 1bls_A | 361 | Crystallographic Structure Of A Phosphonate Derivat | 2e-07 | ||
| 1rgz_A | 363 | Enterobacter Cloacae Gc1 Class C Beta-Lactamase Com | 3e-07 | ||
| 1gce_A | 364 | Structure Of The Beta-Lactamase Of Enterobacter Clo | 3e-07 | ||
| 3ixg_A | 358 | X-Ray Crystal Structure Of The Extended-Spectrum Am | 3e-07 | ||
| 2q9m_A | 359 | 4-Substituted Trinems As Broad Spectrum-Lactamase I | 3e-07 | ||
| 2qz6_A | 358 | First Crystal Structure Of A Psychrophile Class C B | 4e-07 | ||
| 3s4x_A | 367 | Crystal Structure Of The Asn152gly Mutant Of P99 Be | 4e-07 | ||
| 1hvb_A | 349 | Crystal Structure Of Streptomyces R61 Dd-Peptidase | 5e-07 | ||
| 1sde_A | 347 | Toward Better Antibiotics: Crystal Structure Of D-A | 6e-07 | ||
| 1y54_A | 361 | Crystal Structure Of The Native Class C Beta-Lactam | 6e-07 | ||
| 1s6r_A | 359 | 908r Class C Beta-Lactamase Bound To Iodo-Acetamido | 7e-07 | ||
| 2zj9_A | 355 | X-Ray Crystal Structure Of Ampc Beta-Lactamase (Amp | 7e-07 | ||
| 2zc7_A | 359 | Crystal Structure Of Class C Beta-Lactamase Act-1 L | 7e-07 | ||
| 1fr1_A | 361 | Refined Crystal Structure Of Beta-Lactamase From Ci | 1e-06 | ||
| 1fcm_A | 358 | Crystal Structure Of The E.Coli Ampc Beta-Lactamase | 1e-06 | ||
| 2dns_A | 363 | The Crystal Structure Of D-Amino Acid Amidase From | 2e-06 | ||
| 1zc2_A | 361 | Crystal Structure Of Plasmid-Encoded Class C Beta-L | 2e-06 | ||
| 1rgy_A | 360 | Citrobacter Freundii Gn346 Class C Beta-Lactamase C | 2e-06 | ||
| 3ozh_A | 351 | Crystal Structure Of Beta-LactamaseD-Alanine Carbox | 7e-06 | ||
| 3o3v_A | 335 | Crystal Structure Of Clbp Peptidase Domain Length = | 9e-06 | ||
| 4gdn_A | 342 | Structure Of Fmta-Like Protein Length = 342 | 3e-05 | ||
| 3hlc_A | 432 | Simvastatin Synthase (Lovd) From Aspergillus Terreu | 7e-05 | ||
| 3hl9_A | 432 | Simvastatin Synthase (Lovd) From Aspergillus Terreu | 1e-04 | ||
| 3hle_A | 432 | Simvastatin Synthase (Lovd), From Aspergillus Terre | 1e-04 |
| >pdb|3ZYT|A Chain A, Structure Determination Of Esta From Arthrobacter Nitroguajacolicus Rue61a Length = 372 | Back alignment and structure |
|
| >pdb|2QMI|A Chain A, Structure Of The Octameric Penicillin-Binding Protein Homologue From Pyrococcus Abyssi Length = 447 | Back alignment and structure |
|
| >pdb|1CI9|A Chain A, Dfp-Inhibited Esterase Estb From Burkholderia Gladioli Length = 392 | Back alignment and structure |
|
| >pdb|1L0F|A Chain A, X-Ray Crystal Structure Of Ampc N152h Mutant Beta-Lactamase Length = 358 | Back alignment and structure |
|
| >pdb|1I5Q|A Chain A, Crystal Structure Of The E. Coli Ampc Beta-Lactamase Mutant N152a Covalently Acylated With The Inhibitory Beta-Lactam, Moxalactam Length = 358 | Back alignment and structure |
|
| >pdb|3IWI|A Chain A, X-Ray Crystal Structure Of The Extended-Spectrum Ampc Omega Loop Insertion (H210aaa) Mutant Beta-Lactamase At 1.64 Angstrom Resolution Length = 361 | Back alignment and structure |
|
| >pdb|3IWQ|B Chain B, X-Ray Crystal Structure Of The Extended-Spectrum Ampc E219k Mutant Beta-Lactamase At 1.84 Angstrom Resolution Length = 358 | Back alignment and structure |
|
| >pdb|2P9V|A Chain A, Structure Of Ampc Beta-Lactamase With Cross-Linked Active Site After Exposure To Small Molecule Inhibitor Length = 358 | Back alignment and structure |
|
| >pdb|1PI4|A Chain A, Structure Of N289a Mutant Of Ampc In Complex With Sm3, A Phenylglyclboronic Acid Bearing The Cephalothin R1 Side Chain Length = 358 | Back alignment and structure |
|
| >pdb|1FSW|A Chain A, Ampc Beta-Lactamase From E. Coli Complexed With Inhibitor Cephalothinboronic Acid Length = 358 | Back alignment and structure |
|
| >pdb|2FFY|B Chain B, Ampc Beta-Lactamase N289a Mutant In Complex With A Boronic Acid Deacylation Transition State Analog Compound Sm3 Length = 358 | Back alignment and structure |
|
| >pdb|2BLS|A Chain A, Ampc Beta-Lactamase From Escherichia Coli Length = 358 | Back alignment and structure |
|
| >pdb|3IXD|A Chain A, X-Ray Crystal Structure Of The Extended-Spectrum Ampc V298e Mutant Beta-Lactamase At 2.64 Angstrom Resolution Length = 358 | Back alignment and structure |
|
| >pdb|3IWO|A Chain A, X-Ray Crystal Structure Of The Extended-Spectrum Ampc Y221g Mutant Beta-Lactamase At 1.90 Angstrom Resolution Length = 358 | Back alignment and structure |
|
| >pdb|2WZX|A Chain A, Amp-C Beta-Lactamase (Pseudomonas Aeruginosa)in Complex With Compound M-02 Length = 371 | Back alignment and structure |
|
| >pdb|3S1Y|A Chain A, Amp-C Beta-Lactamase (Pseudomonas Aeruginosa) In Complex With A Beta- Lactamase Inhibitor Length = 371 | Back alignment and structure |
|
| >pdb|3FKV|A Chain A, Ampc K67r Mutant Complexed With Benzo(B)thiophene-2-Boronic Acid (Bzb) Length = 358 | Back alignment and structure |
|
| >pdb|1L0E|A Chain A, X-Ray Crystal Structure Of Ampc K67q Mutant Beta-Lactamase Length = 358 | Back alignment and structure |
|
| >pdb|1KVL|A Chain A, X-Ray Crystal Structure Of Ampc S64g Mutant Beta-Lactamase In Complex With Substrate And Product Forms Of Cephalothin Length = 358 | Back alignment and structure |
|
| >pdb|1L0D|A Chain A, X-Ray Crystal Structure Of Ampc S64d Mutant Beta-Lactamase Length = 358 | Back alignment and structure |
|
| >pdb|1BLS|A Chain A, Crystallographic Structure Of A Phosphonate Derivative Of The Enterobacter Cloacae P99 Cephalosporinase: Mechanistic Interpretation Of A Beta-Lactamase Transition State Analog Length = 361 | Back alignment and structure |
|
| >pdb|1RGZ|A Chain A, Enterobacter Cloacae Gc1 Class C Beta-Lactamase Complexed With Transition-State Analog Of Cefotaxime Length = 363 | Back alignment and structure |
|
| >pdb|1GCE|A Chain A, Structure Of The Beta-Lactamase Of Enterobacter Cloacae Gc1 Length = 364 | Back alignment and structure |
|
| >pdb|3IXG|A Chain A, X-Ray Crystal Structure Of The Extended-Spectrum Ampc T70i Mutant Beta-Lactamase With And Without Benzo(B)thiophene-2- Boronic Acid Bound At 2.14 Angstrom Resolution Length = 358 | Back alignment and structure |
|
| >pdb|2Q9M|A Chain A, 4-Substituted Trinems As Broad Spectrum-Lactamase Inhibitors: Structure-Based Design, Synthesis And Biological Activity Length = 359 | Back alignment and structure |
|
| >pdb|2QZ6|A Chain A, First Crystal Structure Of A Psychrophile Class C Beta- Lactamase Length = 358 | Back alignment and structure |
|
| >pdb|3S4X|A Chain A, Crystal Structure Of The Asn152gly Mutant Of P99 Beta-lactamase Length = 367 | Back alignment and structure |
|
| >pdb|1HVB|A Chain A, Crystal Structure Of Streptomyces R61 Dd-Peptidase Complexed With A Novel Cephalosporin Analog Of Cell Wall Peptidoglycan Length = 349 | Back alignment and structure |
|
| >pdb|1SDE|A Chain A, Toward Better Antibiotics: Crystal Structure Of D-Ala-D-Ala Peptidase Inhibited By A Novel Bicyclic Phosphate Inhibitor Length = 347 | Back alignment and structure |
|
| >pdb|1Y54|A Chain A, Crystal Structure Of The Native Class C Beta-Lactamase From Enterobacter Cloacae 908r Complexed With Brl42715 Length = 361 | Back alignment and structure |
|
| >pdb|1S6R|A Chain A, 908r Class C Beta-Lactamase Bound To Iodo-Acetamido-Phenyl Boronic Acid Length = 359 | Back alignment and structure |
|
| >pdb|2ZJ9|A Chain A, X-Ray Crystal Structure Of Ampc Beta-Lactamase (Ampc(D)) From An Escherichia Coli With A Tripeptide Deletion (Gly286 Ser287 Asp288) On The H10 Helix Length = 355 | Back alignment and structure |
|
| >pdb|2ZC7|A Chain A, Crystal Structure Of Class C Beta-Lactamase Act-1 Length = 359 | Back alignment and structure |
|
| >pdb|1FR1|A Chain A, Refined Crystal Structure Of Beta-Lactamase From Citrobacter Freundii Indicates A Mechanism For Beta-Lactam Hydrolysis Length = 361 | Back alignment and structure |
|
| >pdb|1FCM|A Chain A, Crystal Structure Of The E.Coli Ampc Beta-Lactamase Mutant Q120lY150E Covalently Acylated With The Inhibitory Beta-Lactam, Cloxacillin Length = 358 | Back alignment and structure |
|
| >pdb|2DNS|A Chain A, The Crystal Structure Of D-Amino Acid Amidase From Ochrobactrum Anthropi Sv3 Complexed With D-Phenylalanine Length = 363 | Back alignment and structure |
|
| >pdb|1ZC2|A Chain A, Crystal Structure Of Plasmid-Encoded Class C Beta-Lactamase Cmy-2 Complexed With Citrate Molecule Length = 361 | Back alignment and structure |
|
| >pdb|1RGY|A Chain A, Citrobacter Freundii Gn346 Class C Beta-Lactamase Complexed With Transition-State Analog Of Cefotaxime Length = 360 | Back alignment and structure |
|
| >pdb|3OZH|A Chain A, Crystal Structure Of Beta-LactamaseD-Alanine Carboxypeptidase From Yersinia Pestis Length = 351 | Back alignment and structure |
|
| >pdb|3O3V|A Chain A, Crystal Structure Of Clbp Peptidase Domain Length = 335 | Back alignment and structure |
|
| >pdb|4GDN|A Chain A, Structure Of Fmta-Like Protein Length = 342 | Back alignment and structure |
|
| >pdb|3HLC|A Chain A, Simvastatin Synthase (Lovd) From Aspergillus Terreus, S5 Mutant, Unliganded Length = 432 | Back alignment and structure |
|
| >pdb|3HL9|A Chain A, Simvastatin Synthase (Lovd) From Aspergillus Terreus, Unliganded Length = 432 | Back alignment and structure |
|
| >pdb|3HLE|A Chain A, Simvastatin Synthase (Lovd), From Aspergillus Terreus, S5 Mutant, S76a Mutant, Complex With Monacolin J Acid Length = 432 | Back alignment and structure |
|
Structure Templates Detected by RPS-BLAST 
Original result of RPS-BLAST against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 977 | |||
| 2qz6_A | 358 | Beta-lactamase; psychrophIle, cold adaptation, ant | 3e-32 | |
| 2wzx_A | 371 | Beta-lactamase; inhibitor, hydrolase, antibiotic r | 8e-32 | |
| 2ffy_A | 358 | Beta-lactamase; AMPC, deacylation, transition stat | 2e-31 | |
| 2drw_A | 363 | DAA, D-amino acid amidase; penicillin recognizing | 3e-30 | |
| 1zkj_A | 359 | CMY-10, extended-spectrum beta-lactamase; plasmid, | 6e-30 | |
| 1ci9_A | 392 | ESTB, protein (carboxylesterase); hydrolase, cabox | 1e-29 | |
| 3o3v_A | 335 | Beta-lactamase, CLBP protein; alpha/beta, disulfid | 5e-28 | |
| 3rju_A | 351 | Beta-lactamase/D-alanine carboxypeptidase; structu | 1e-27 | |
| 1yqs_A | 349 | D-alanyl-D-alanine carboxypeptidase; cell well bio | 1e-26 | |
| 2qmi_A | 447 | PBP related beta-lactamase; PAB87, octamer, LU-HPD | 2e-26 | |
| 1ei5_A | 520 | D-aminopeptidase, DAP; penicillin binding protein, | 1e-25 | |
| 3tg9_A | 356 | Penicillin-binding protein; structural genomics, P | 1e-24 | |
| 3hlc_A | 432 | Transesterase, LOVD; alpha/beta hydrolase fold, tr | 3e-23 | |
| 2dcf_A | 392 | 6-aminohexanoate-dimer hydrolase; HET: ACA MES; 1. | 4e-20 | |
| 4gb7_A | 422 | 6-aminohexanoate-dimer hydrolase; structural genom | 3e-19 | |
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 2e-17 | |
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 2e-14 | |
| 3i7j_A | 280 | Beta-lactamase MB2281C; alpha-beta protein., struc | 2e-17 |
| >2qz6_A Beta-lactamase; psychrophIle, cold adaptation, antibiotic resistance, hydrolase, periplasm; 2.26A {Pseudomonas fluorescens} Length = 358 | Back alignment and structure |
|---|
Score = 128 bits (323), Expect = 3e-32
Identities = 41/185 (22%), Positives = 88/185 (47%), Gaps = 8/185 (4%)
Query: 476 SDVEAKLRDFLVELGNDGKILGIQVCAYKDGEVIIDTSAGMLGRYDPRPVQPDSLFPVFS 535
+D+ + + L I G+ V ++G+ + G+ + +P+ ++LF + S
Sbjct: 2 TDIRQVVDSTVEPLMQQQDIAGLSVAVIQNGKAQY-FNYGVANKDSKQPITENTLFEIGS 60
Query: 536 VTKGITAGMLHWLVDNGKLKLEENIANIWPEFKSNGKDLIKVHHVLNHTSGLHNVSVDLS 595
V+K TA + + + NGKLKL + + P + + D I + ++ +T+G +
Sbjct: 61 VSKTFTATLAGYALANGKLKLSDPASQYLPALRGDKFDHISLLNLGTYTAGGLPLQFPEE 120
Query: 596 SENPLLICDWDECLNRIALSAPETEPGQEQLYHYLSFGWLCGGIIERASGKKFQEILEEG 655
S+N + ++ P PG ++LY S G L G + ++ G+ F++++E+
Sbjct: 121 SDNT------GKMISYYQHWKPAFAPGTQRLYSNPSIG-LFGHLAAQSLGQPFEKLMEQT 173
Query: 656 IIQPL 660
++ L
Sbjct: 174 VLPKL 178
|
| >2wzx_A Beta-lactamase; inhibitor, hydrolase, antibiotic resistance; HET: ZX0; 1.40A {Pseudomonas aeruginosa} PDB: 2wzz_A* 3s1y_A* 3s22_A* Length = 371 | Back alignment and structure |
|---|
Score = 127 bits (320), Expect = 8e-32
Identities = 43/184 (23%), Positives = 83/184 (45%), Gaps = 7/184 (3%)
Query: 477 DVEAKLRDFLVELGNDGKILGIQVCAYKDGEVIIDTSAGMLGRYDPRPVQPDSLFPVFSV 536
++A + + + I G+ V GE S G+ + D R V P++LF + SV
Sbjct: 7 RLKALVDAAVQPVMKANDIPGLAVAISLKGEPHY-FSYGLASKEDGRRVTPETLFEIGSV 65
Query: 537 TKGITAGMLHWLVDNGKLKLEENIANIWPEFKSNGKDLIKVHHVLNHTSGLHNVSVDLSS 596
+K TA + + + K++L++ + WP + + D I + + +T+G + S
Sbjct: 66 SKTFTATLAGYALTQDKMRLDDRASQHWPALQGSRFDGISLLDLATYTAGGLPLQFPDSV 125
Query: 597 ENPLLICDWDECLNRIALSAPETEPGQEQLYHYLSFGWLCGGIIERASGKKFQEILEEGI 656
+ D + + P PG ++LY S G L G + R+ G+ F+ ++E+ +
Sbjct: 126 QK-----DQAQIRDYYRQWQPTYAPGSQRLYSNPSIG-LFGYLAARSLGQPFERLMEQQV 179
Query: 657 IQPL 660
L
Sbjct: 180 FPAL 183
|
| >2ffy_A Beta-lactamase; AMPC, deacylation, transition state, boronic acid, hydrolase; HET: SM3; 1.07A {Escherichia coli} SCOP: e.3.1.1 PDB: 1pi5_A* 1pi4_A* 2hds_A* 1c3b_A* 1fco_A* 1ga9_A* 1iem_A* 1kds_A* 1kdw_A* 1ke0_A* 1ke3_A* 1iel_A 1kvm_A* 1l2s_A* 1ll5_A* 1ll9_A* 1llb_A* 1mxo_A* 1my8_A* 1xgi_A* ... Length = 358 | Back alignment and structure |
|---|
Score = 126 bits (317), Expect = 2e-31
Identities = 53/304 (17%), Positives = 103/304 (33%), Gaps = 46/304 (15%)
Query: 477 DVEAKLRDFLVELGNDGKILGIQVCAYKDGEVIIDTSAGMLGRYDPRPVQPDSLFPVFSV 536
+ + + L KI G+ V G+ + G +PV +LF + SV
Sbjct: 4 QINDIVHRTITPLIEQQKIPGMAVAVIYQGKPYY-FTWGYADIAKKQPVTQQTLFELGSV 62
Query: 537 TKGITAGMLHWLVDNGKLKLEENIANIWPEFKSNGKDLIKVHHVLNHTSGLHNVSVDLSS 596
+K T + + G++KL + WPE + + I + H+ +T+G L
Sbjct: 63 SKTFTGVLGGDAIARGEIKLSDPTTKYWPELTAKQWNGITLLHLATYTAGG------LPL 116
Query: 597 ENPLLICDWDECLNRIALSAPETEPGQEQLYHYLSFGWLCGGIIERASGKKFQEILEEGI 656
+ P + + L P PG ++LY S G L G + + SG F++ ++ +
Sbjct: 117 QVPDEVKSSSDLLRFYQNWQPAWAPGTQRLYANSSIG-LFGALAVKPSGLSFEQAMQTRV 175
Query: 657 IQPLSIDGELYIGIPPGVESRLASLTIDTDDLNKVSGINNRPDLRLPSSFQPDKISQLAA 716
QPL ++ +I +PP E A + +
Sbjct: 176 FQPLKLN-HTWINVPPAEEKNYA---------------------------WGYREGKAVH 207
Query: 717 ITPAVFNMLNIRRAIIPAANGHCSARALARYYAALADGGVVPPPHSRLSKPPLGSHPHIP 776
++P + A + +AR+ + + L + +
Sbjct: 208 VSPGALDA--------EAYGVKSTIEDMARWVQSNLKPLDINE--KTLQQGIQLAQSRYW 257
Query: 777 KFPS 780
+
Sbjct: 258 QTGD 261
|
| >2drw_A DAA, D-amino acid amidase; penicillin recognizing protein, D-stereospecific, hydrophobic, hydrolase; 2.10A {Ochrobactrum anthropi} SCOP: e.3.1.1 PDB: 2dns_A 2efu_A* 2efx_A* Length = 363 | Back alignment and structure |
|---|
Score = 122 bits (308), Expect = 3e-30
Identities = 57/285 (20%), Positives = 99/285 (34%), Gaps = 20/285 (7%)
Query: 476 SDVEAKLRDFLVELGNDGKILGIQVCAYKDGEVIIDTSAGMLGRYDPRPVQPDSLFPVFS 535
SD+ ++ L + G ++G+ + GE +G +++ P+ D LF + S
Sbjct: 2 SDLNNAIQGILDDHVARG-VVGVSLALCLPGEETSLYQSGYADKFNKMPMTGDHLFRIAS 60
Query: 536 VTKGITAGMLHWLVDNGKLKLEENIANIWPEFKSNGKDLIKVHHVLNHTSGLHNVSVDLS 595
TK A LH LV +G + L+E I +P+ + V +LNH SGL + +
Sbjct: 61 CTKSFIATGLHLLVQDGTVDLDEPITRWFPDLP--KAAQMPVRILLNHRSGLPDFETSM- 117
Query: 596 SENPLLICDWDECLNRIALSAPETEPGQEQLYHYLSFGW-LCGGIIERASGKKFQEILEE 654
E ++ + EP Y + G+ L G II +GK + + L
Sbjct: 118 PMISDKSWTAQEIVDFSFRHGVQKEPWHG--MEYSNTGYVLAGMIIAHETGKPYSDHLRS 175
Query: 655 GIIQPLSIDGELYIGIPPGVESRLASLTIDTDDLNKVSGINNRPDLRLPSSFQPDKISQL 714
I PL + R A G + +
Sbjct: 176 RIFAPLGMKDTWVGTHETFPIEREA------------RGYMHAAADDENPQWDVSGAGDP 223
Query: 715 AAITPAVFNMLNIRRAIIPAANGHCSARALARYYAALADGGVVPP 759
+ A A + + R + ++ AL DG ++
Sbjct: 224 VDGVWDSTEWFPLSGA-NAAGDMVSTPRDIVKFLNALFDGRILDQ 267
|
| >1zkj_A CMY-10, extended-spectrum beta-lactamase; plasmid, class C, hydrolase; 1.55A {Enterobacter aerogenes} Length = 359 | Back alignment and structure |
|---|
Score = 121 bits (305), Expect = 6e-30
Identities = 37/184 (20%), Positives = 77/184 (41%), Gaps = 8/184 (4%)
Query: 477 DVEAKLRDFLVELGNDGKILGIQVCAYKDGEVIIDTSAGMLGRYDPRPVQPDSLFPVFSV 536
+ + + L + +I G+ V KDG+ + G+ R V +LF + SV
Sbjct: 8 PLRPVVDASIQPLLKEHRIPGMAVAVLKDGKAHY-FNYGVANRESGAGVSEQTLFEIGSV 66
Query: 537 TKGITAGMLHWLVDNGKLKLEENIANIWPEFKSNGKDLIKVHHVLNHTSGLHNVSVDLSS 596
+K +TA + + V G ++L++ + P K + D I + + +++G +
Sbjct: 67 SKTLTATLGAYAVVKGAMQLDDKASRHAPWLKGSAFDSITMGELATYSAGGLPLQFPEEV 126
Query: 597 ENPLLICDWDECLNRIALSAPETEPGQEQLYHYLSFGWLCGGIIERASGKKFQEILEEGI 656
++ ++ AP PG + Y S G L G + + + F ++E+ +
Sbjct: 127 DSS------EKMRAYYRQWAPVYSPGSHRQYSNPSIG-LFGHLAASSLKQPFAPLMEQTL 179
Query: 657 IQPL 660
+ L
Sbjct: 180 LPGL 183
|
| >1ci9_A ESTB, protein (carboxylesterase); hydrolase, caboxylesterase; HET: DFP; 1.80A {Burkholderia gladioli} SCOP: e.3.1.1 PDB: 1ci8_A* Length = 392 | Back alignment and structure |
|---|
Score = 121 bits (305), Expect = 1e-29
Identities = 55/202 (27%), Positives = 92/202 (45%), Gaps = 28/202 (13%)
Query: 479 EAKLRDFLVELGNDGKILGIQVCAYKDGEVIIDTSAGMLGRYDPRPVQPDSLFPVFSVTK 538
A+L + + +++G + GE++ + G+ R RP++ D+LF + SVTK
Sbjct: 19 AARLDAVFDQALRERRLVGAVAIVARHGEILYRRAQGLADREAGRPMREDTLFRLASVTK 78
Query: 539 GIT--AGMLHWLVDNGKLKLEENIANIWPEFK----SNGKDLIKVHHVLNHTSGL----- 587
I A + LV G+L L+ + PEF+ + L+ +HH+L HTSGL
Sbjct: 79 PIVALAVLR--LVARGELALDAPVTRWLPEFRPRLADGSEPLVTIHHLLTHTSGLGYWLL 136
Query: 588 ---------HNVSVDLSSENPLLICDWDECLNRIALSAPETEPGQEQLYHYLSFGWLCGG 638
+S + + D DE L R+A + PG Y L+ L G
Sbjct: 137 EGAGSVYDRLGISDGIDLRDF----DLDENLRRLASAPLSFAPGSGWQYS-LALDVL-GA 190
Query: 639 IIERASGKKFQEILEEGIIQPL 660
++ERA+G+ ++ + QPL
Sbjct: 191 VVERATGQPLAAAVDALVAQPL 212
|
| >3o3v_A Beta-lactamase, CLBP protein; alpha/beta, disulfide bridge, hydrolase; 2.40A {Escherichia coli} Length = 335 | Back alignment and structure |
|---|
Score = 115 bits (289), Expect = 5e-28
Identities = 49/307 (15%), Positives = 101/307 (32%), Gaps = 41/307 (13%)
Query: 481 KLRDFLVELGNDGKILGIQVCAYKDGEVIIDTSAGMLGRYDPRPVQPDSLFPVFSVTKGI 540
+L + + + K+ + V G G+ + D+++ + S++K
Sbjct: 2 RLSTLIHQRMQEAKVPALSVSVTIKGVRQRFV-YGVADVASQKANTLDTVYELGSMSKAF 60
Query: 541 TAGMLHWLVDNGKLKLEENIANIWPEFKSNGKDL---IKVHHVLNHTSGLHNVSVDLSSE 597
T ++ L+ G+L+ ++I PE + N + + V L HTSGL ++
Sbjct: 61 TGLVVQILIQEGRLRQGDDIITYLPEMRLNYQGKPASLTVADFLYHTSGLPFSTLARLEN 120
Query: 598 NPLLICDWDECLNRIALSAPETEPGQEQLYHYLSFGWLCGGIIERASGKKFQEILEEGII 657
++ PG + Y ++ + G +IE +GK F E++ E +
Sbjct: 121 PM----PGSAVAQQLRNENLLFAPGAKFSYASANYD-VLGAVIENVTGKTFTEVIAERLT 175
Query: 658 QPLSIDGELYIGIPPGVESRLASLTIDTDDLNKVSGINNRPDLRLPSSFQPDKISQLAAI 717
QPL + A++ + D++ + K A
Sbjct: 176 QPLGMS---------------ATVAVKGDEI--------IVNKASGYKLGFGKPVLFHAP 212
Query: 718 TPAVFNMLNIRRAIIPAANGHCSARALARYYAALADGGVVPPPHSRLSKPPLGSHPHIPK 777
R +PAA H + + + A +P + +P
Sbjct: 213 LA---------RNHVPAAYIHSTLPDMEIWIDAWLHRKALPATLREAMSNSWRGNSDVPL 263
Query: 778 FPSHETS 784
+
Sbjct: 264 AADNRIL 270
|
| >3rju_A Beta-lactamase/D-alanine carboxypeptidase; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta sandwich; HET: MSE CIT; 1.50A {Yersinia pestis} PDB: 3ozh_A* Length = 351 | Back alignment and structure |
|---|
Score = 114 bits (288), Expect = 1e-27
Identities = 42/188 (22%), Positives = 83/188 (44%), Gaps = 7/188 (3%)
Query: 478 VEAKLRDFLVELGNDGKILGIQVCAYKDGEVIIDTSAGMLGRYDPRPVQPDSLFPVFSVT 537
+ + + + +G+ + + +V+ S G + +PDSL + S+T
Sbjct: 6 TSQIVDQYAEHIFYNSGAVGMALVVIDNNQVVNR-SFGETQPGNNIRPRPDSLIRIASIT 64
Query: 538 KGITAGMLHWLVDNGKLKLEENIANIWPEFKS----NGKDLIKVHHVLNHTSGLHNVSVD 593
K +T+ ++ L D+G +KL + + P+ + + K I++ H+ +HTSGL
Sbjct: 65 KLMTSEIMVKLADDGIVKLTDPLKKYAPKGVNVPSYSAKQPIRLLHLASHTSGLPREQPG 124
Query: 594 LSSENPLLI-CDWDECLNRIALSAPETEPGQEQLYHYLSFGWLCGGIIERASGKKFQEIL 652
+ P+ D + L+ PG + Y L++ L + RA+GK + +L
Sbjct: 125 GPQKRPVFTWPTKDNRWQWLKLAKVTVPPGVKAAYSNLAYD-LLADALSRAAGKPYAHLL 183
Query: 653 EEGIIQPL 660
+ I PL
Sbjct: 184 RDKITAPL 191
|
| >1yqs_A D-alanyl-D-alanine carboxypeptidase; cell well biosynthesis, beta-lactam, beta-sultam, sulfonylation, hydrolase; HET: BSA; 1.05A {Streptomyces SP} SCOP: e.3.1.1 PDB: 1cef_A* 1ceg_A* 1ikg_A* 1iki_A* 1hvb_A* 1pw1_A* 1pw8_A* 1mpl_A* 1pwd_A* 1pwc_A* 1scw_A* 1pwg_A* 3pte_A 1sde_A* Length = 349 | Back alignment and structure |
|---|
Score = 111 bits (279), Expect = 1e-26
Identities = 46/189 (24%), Positives = 76/189 (40%), Gaps = 14/189 (7%)
Query: 480 AKLRDFLVELGNDGKILGIQVCAYKDGEVIIDTSAGMLGRYDPRPVQPDSLFPVFSVTKG 539
L+ L + G G V D I S G+ R R + F V SVTK
Sbjct: 9 TGLQAVLHTALSQG-APGAMV-RVDDNGTIHQLSEGVADRATGRAITTTDRFRVGSVTKS 66
Query: 540 ITAGMLHWLVDNGKLKLEENIANIWPEFKSNGKDLIKVHHVLNHTSGLHNVSVDLSSE-- 597
+A +L LVD GKL L+ ++ P + + I V V++H SGL++ + D+ ++
Sbjct: 67 FSAVVLLQLVDEGKLDLDASVNTYLPGLLPDDR--ITVRQVMSHRSGLYDYTNDMFAQTV 124
Query: 598 -----NPLLICDWDECLNRIALSAPETEPGQEQLYHYLSFGW-LCGGIIERASGKKFQEI 651
+ + + + PG Y Y + + + G +IE+ +G
Sbjct: 125 PGFESVRNKVFSYQDLITLSLKHGVTNAPGAA--YSYSNTNFVVAGMLIEKLTGHSVATE 182
Query: 652 LEEGIIQPL 660
+ I PL
Sbjct: 183 YQNRIFTPL 191
|
| >2qmi_A PBP related beta-lactamase; PAB87, octamer, LU-HPDO3A, archaea, hydrolase; HET: DO3; 2.20A {Pyrococcus abyssi} Length = 447 | Back alignment and structure |
|---|
Score = 112 bits (282), Expect = 2e-26
Identities = 50/191 (26%), Positives = 93/191 (48%), Gaps = 12/191 (6%)
Query: 480 AKLRDFLVELGNDGKILGIQVCAYKDGEVIIDTSAGMLGRYDPRPVQPDSLFPVFSVTKG 539
KL F+VE + K+ GI + KDG+V+ G P P++++ + S+TK
Sbjct: 4 GKLESFIVEKMAERKVPGISISIIKDGDVVYAKGFGYRNVEARLPSTPETIYGIGSITKS 63
Query: 540 ITAGMLHWLVDNGKLKLEENIANIWPEFKSNGKDLIKVHHVLNHTSGLHNVSVDLSSENP 599
TA + LV+ G L L++ + + + VHH+L H+SG+ ++ + +
Sbjct: 64 FTALAIMKLVEEGGLSLDDPVEKFVNIKLRPFGEPVTVHHLLTHSSGIPSLGYAEAFIDG 123
Query: 600 LLICDW-------DECLNRIALSAPET--EPGQEQLYHYLSFGW-LCGGIIERASGKKFQ 649
++ D +E + +PG+ + YL+ G+ L G IIE+ SG ++
Sbjct: 124 MVGGDNWLPVSTPEETIAFARDMEKWAVAKPGER--FFYLNTGYVLLGKIIEKVSGVSYE 181
Query: 650 EILEEGIIQPL 660
E +++ I++PL
Sbjct: 182 EYIKKKILEPL 192
|
| >1ei5_A D-aminopeptidase, DAP; penicillin binding protein, alpha/beta domain, beta barrel domain, hydrolase; 1.90A {Ochrobactrum anthropi} SCOP: b.61.3.1 b.61.3.1 e.3.1.1 Length = 520 | Back alignment and structure |
|---|
Score = 111 bits (278), Expect = 1e-25
Identities = 51/284 (17%), Positives = 93/284 (32%), Gaps = 44/284 (15%)
Query: 480 AKLRDFLVELGNDGKILGIQVCAYKDGEVIIDTSAGMLGRYDPRPVQPDSLFPVFSVTKG 539
+ L F+ + + K G V KDGEV++ + G P+ D+ P+ SV+K
Sbjct: 7 SALEAFVRHIPQNYKGPGGVVAVVKDGEVVLQHAWGFADLRTRTPMTLDTRMPICSVSKQ 66
Query: 540 ITAGMLHWLVDNGKLKLEENIANIWPEFKSNGKDLIKVHHVLNHTSGLHNVSVDLSSENP 599
T +L V +L L++ + +F+ V + N+ SGL +
Sbjct: 67 FTCAVLLDAVGEPEL-LDDALEAYLDKFEDER---PAVRDLCNNQSGLRDYWALSVLCGA 122
Query: 600 LLICDW--DECLNRIALSAP-ETEPGQEQLYHYLSFGW-LCGGIIERASGKKFQEILEEG 655
+ + + + EPG Y Y + + + +IE +G+ +IL E
Sbjct: 123 DPEGVFLPAQAQSLLRRLKTTHFEPGSH--YSYCNGNFRILADLIEAHTGRTLVDILSER 180
Query: 656 IIQPLSIDGELYIGIPPGVESRLASLTIDTDDLNKVSGINNRPDLRLPSSFQPDKISQLA 715
I P G++ A L DT ++ +G
Sbjct: 181 IFAPA------------GMKR--AELISDTALFDECTGYEGDTVRGFL------------ 214
Query: 716 AITPAVFNMLNIRRAIIPAANGHCSARALARYYAALADGGVVPP 759
PA + + A S + + +
Sbjct: 215 ---PATNRI-----QWMGDAGICASLNDMIAWEQFIDATRDDES 250
|
| >3tg9_A Penicillin-binding protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.20A {Bacillus halodurans} Length = 356 | Back alignment and structure |
|---|
Score = 105 bits (264), Expect = 1e-24
Identities = 43/189 (22%), Positives = 80/189 (42%), Gaps = 17/189 (8%)
Query: 482 LRDFLVELGNDGKILGIQVCAYKDGEVIIDTSAGMLGRYDPRPVQPDSLFPVFSVTKGIT 541
+++ L + D K+ G + K ++ S G R + P + + F + S K T
Sbjct: 3 MKNHLHTIMEDWKLSGTAL-MKKGEDIPFIASLGFANRAERIPNEHHTRFGIASGCKLFT 61
Query: 542 AGMLHWLVDNGKLKLEENIANIWPEFKSNGKDLIKVHHVLNHTSGLHNVSVDLSSENPLL 601
A + LV+ GKL + +++ N + +HH+L HTSG+ + + +++
Sbjct: 62 AIAICQLVEAGKLSFDTPLSDWLDAPFPN----VTIHHLLTHTSGVPDYFDEEITDDFED 117
Query: 602 ICDW---------DECLNRIALSAPETEPGQEQLYHYLSFG-WLCGGIIERASGKKFQEI 651
+ + L + + PG +HY + G L G ++E SG FQE
Sbjct: 118 LWKDVPMYHLRRLKDFLPLFQHAPMKFPPGHR--FHYNNAGFILLGLVVESVSGVTFQEY 175
Query: 652 LEEGIIQPL 660
+E + Q
Sbjct: 176 VEANVFQRA 184
|
| >3hlc_A Transesterase, LOVD; alpha/beta hydrolase fold, transferase; HET: PG4; 2.00A {Aspergillus terreus} PDB: 3hld_A* 3hlf_A* 3hle_A* 3hlg_A* 3hlb_A 3hl9_A Length = 432 | Back alignment and structure |
|---|
Score = 102 bits (257), Expect = 3e-23
Identities = 50/255 (19%), Positives = 89/255 (34%), Gaps = 32/255 (12%)
Query: 480 AKLRDFLVELGNDGKILGIQVCAY-KDGEVIIDTSAGMLG-----RYDPRPVQPDSLFPV 533
+ + +I G + A G + G P+Q D+ +
Sbjct: 34 VLMETAFRKAVESRQIPGAVIMARDASGNLNYTRCFGARTVRRDENNQLPPLQVDTPCRL 93
Query: 534 FSVTKGITAGMLHWLVDNGKLKLEENIANIWPEFK---------SNGKDL-------IKV 577
S TK +T M+ ++ G + L+E + + P+ G I +
Sbjct: 94 ASATKLLTTIMVLQCMERGLVDLDETVDRLLPDLSAMPVLEGFDDAGNARLRERRGKITL 153
Query: 578 HHVLNHTSGL----HNVSVDLSSENPLLICDWDECLNRIALSAP-ETEPGQEQLYHYLSF 632
H+L HTSGL + + L + + P +PG E +Y +
Sbjct: 154 RHLLTHTSGLSYVFLHPLLREYMAQGYLQSAEKFGIQSRL-APPAVNDPGAEWIYG-TNL 211
Query: 633 GWLCGGIIERASGKKFQEILEEGIIQPLSI-DGELYIGIPPGVESRLASLTIDTDDLNKV 691
W G ++ERA+G ++ L+E I PL I D + P + +R A T ++
Sbjct: 212 DWA-GKLVERATGLDLEQYLQENICAPLGITDMTFKLQQRPDMLARRADQTHRNSADGRL 270
Query: 692 SGINNRPDLRLPSSF 706
++ R
Sbjct: 271 R-YDDSVYFRADGEE 284
|
| >2dcf_A 6-aminohexanoate-dimer hydrolase; HET: ACA MES; 1.40A {Flavobacterium SP} SCOP: e.3.1.1 PDB: 3a65_A* 1wyc_A 2zm7_A* 2e8i_A* 2zma_A* 3a66_A* 2zm0_A* 1wyb_A 2zm8_A* 2zly_A* 2zm9_A* 2zm2_A* Length = 392 | Back alignment and structure |
|---|
Score = 92.9 bits (231), Expect = 4e-20
Identities = 36/209 (17%), Positives = 67/209 (32%), Gaps = 25/209 (11%)
Query: 476 SDVEAKLRDFLVELGNDGKILGIQVCAYKDGEVIIDTSAGMLGRYDPRPVQPDSLFPVFS 535
+ A+L D L + V + EV+ + Y PD + +
Sbjct: 64 GAIAAQLPD-LEQRLEQTYTDAFLV--LRGTEVVAE-------YYRA-GFAPDDRHLLMA 112
Query: 536 VTKGITAGMLHWLVDNGKLKLEENIANIWPEFKSNGKDLIKVHHVLNHTSGL-------- 587
V+K + ++ LVD G++ + + PE + D V VL+ +
Sbjct: 113 VSKSLCGTVVGALVDEGRIDPAQPVTEYVPELAGSVYDGPSVLQVLDMQISIDYNEDYVD 172
Query: 588 ---HNVSVDLSSENPLLICDWDECLNRIALSAPETEPGQEQLYHYLSFG-WLCGGIIERA 643
+ D S+ + E + Y S + I+ER
Sbjct: 173 PASEVQTHDRSAGWRTRRHGDPADTYEFLTTLRGDGSTGE--FQYCSANTDVLAWIVERV 230
Query: 644 SGKKFQEILEEGIIQPLSIDGELYIGIPP 672
+G ++ E L + L D + I +
Sbjct: 231 TGLRYVEALSTYLWAKLDADRDATITVDT 259
|
| >4gb7_A 6-aminohexanoate-dimer hydrolase; structural genomics, IDP05595, national institute of allergy and infectious diseases; HET: MSE; 1.60A {Bacillus anthracis} Length = 422 | Back alignment and structure |
|---|
Score = 90.7 bits (225), Expect = 3e-19
Identities = 29/210 (13%), Positives = 64/210 (30%), Gaps = 34/210 (16%)
Query: 477 DVEAKLRDFLVELGNDGKILGIQVCAYKDGEVIIDTSAGMLGRYDPRPVQPDSLFPVFSV 536
L++ L + D ++ +G+++ + RY + S+
Sbjct: 96 GSATPLKELLDDNKTDAFVV------VHNGQLVYE-------RYFN-GYNESEPHGMASL 141
Query: 537 TKGITAGMLHWLVDNGKLKLEENIANIWPEFKSNGKDLIKVHHVLNHTSGL---HNVSVD 593
K T ++ L + ++ LE+ E K+ + +++ + +
Sbjct: 142 AKVFTGAIIQSLAEENRIDLEKTADTYIKELKNTPFGKATLQQLMDMQVSVEYPTHGYEH 201
Query: 594 LSSENP-------------LLICDWDECLNRIALSAP-ETEPGQEQLYHYLSFG-WLCGG 638
+ EN D + + A PG + Y +
Sbjct: 202 PALENQDAQLYLASNILPRDKNYDGPMKIYDMLQEAKETAPPGSV--FSYNNGSTETLAW 259
Query: 639 IIERASGKKFQEILEEGIIQPLSIDGELYI 668
II +GK E + E I + ++ Y
Sbjct: 260 IIRTITGKSLAENVSERIWSQIGMEENAYY 289
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 87.2 bits (215), Expect = 2e-17
Identities = 106/686 (15%), Positives = 206/686 (30%), Gaps = 201/686 (29%)
Query: 7 YRRRMSVFSMAILIYLDYKAVQQREKWI-KKSKISALWQRAHERNAKRVLNLIIKLEG-- 63
Y+ +SVF A + D K VQ K I K +I + + L + +
Sbjct: 18 YKDILSVFEDAFVDNFDCKDVQDMPKSILSKEEIDHIIMSKDAVSGTLRLFWTLLSKQEE 77
Query: 64 ----------------LWVKL-----------GQYLSTRADVL--------------PEP 82
L + Y+ R D L +P
Sbjct: 78 MVQKFVEEVLRINYKFLMSPIKTEQRQPSMMTRMYIEQR-DRLYNDNQVFAKYNVSRLQP 136
Query: 83 YISLLKQLQDSLPPRPVQEVSQTIEREFGESMGGMFMDFVETPLATASIAQVHRATLVDG 142
Y+ L + L L RP + V I G + G +T +A + ++
Sbjct: 137 YLKLRQALL-EL--RPAKNV--LI---DG--VLG----SGKTWVA-LDVCLSYKVQCKMD 181
Query: 143 RQVV-VKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIID-EWCKEAPKELDFNS 200
++ + +++ +LE L+ +D + + N + + + L S
Sbjct: 182 FKIFWLNLKNCNSPETVLEMLQKLLYQIDPNWTSRSDHSSNIKLRIHSIQAELRRL-LKS 240
Query: 201 EAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQSSETVLILEFMDGIRLNDCESL 260
+ +E+ L L+L ++ + ++
Sbjct: 241 K---------------PYENC----------L-----------LVL---LNVQ--NAKAW 259
Query: 261 EAFGVNKQKVVEEITRAYAHQIYVDGFFNGDPHPGNFLVSKDPPHRPI-LLDFGLTKKLS 319
AF ++ + ++ TR +FL + H + LT
Sbjct: 260 NAFNLSCKILL--TTR--------------FKQVTDFLSAATTTHISLDHHSMTLTPDEV 303
Query: 320 SSMKQALAKMFFAAAEGDHVALLSAFAEMGLRLRLDVPEQAMEVSTLFFRT-SAPANEAF 378
+LL + + + D+P + + + + +
Sbjct: 304 -------------------KSLLLKYLDCRPQ---DLPREVLTTNPRRLSIIAESIRDGL 341
Query: 379 ETVKNLSEQRAKNLKVIQEK--MKLNQKEVKR-FNPVDAFPGDIVIFSRVLNLLRGLSST 435
T N L I E L E ++ F+ + FP I + +L+L+
Sbjct: 342 ATWDNWKHVNCDKLTTIIESSLNVLEPAEYRKMFDRLSVFPPSAHIPTILLSLIWFDVIK 401
Query: 436 MNVRIVYLDIMRPFAEYVLQVGINKEPSVSAEWIYSKPIHSDVEAKLRDFLVELGNDGKI 495
+V ++ +Y L + K+P S I S I+ +++ KL + L I
Sbjct: 402 SDVM----VVVNKLHKYSL---VEKQPKESTISIPS--IYLELKVKLEN-EYALHR--SI 449
Query: 496 LG--IQVCAYKDGEVIIDTSAG----MLGR--YDPRPVQPDSLFP-VF------------ 534
+ + ++I +G + + +LF VF
Sbjct: 450 VDHYNIPKTFDSDDLIPPYLDQYFYSHIGHHLKNIEHPERMTLFRMVFLDFRFLEQKIRH 509
Query: 535 -SVTKGITAGMLHWLVDNGKLKL-EENIANIWPEFKSNGKDLIKVHHVLNHTSGLHNVSV 592
S + +L+ L LK + I + P+++ ++ +
Sbjct: 510 DSTAWNASGSILNTLQQ---LKFYKPYICDNDPKYERLVNAIL--DFLPKI--------- 555
Query: 593 DLSSENPLLICDWDECLNRIALSAPE 618
EN LIC L RIAL A +
Sbjct: 556 ---EEN--LICSKYTDLLRIALMAED 576
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 77.2 bits (189), Expect = 2e-14
Identities = 75/568 (13%), Positives = 160/568 (28%), Gaps = 124/568 (21%)
Query: 175 AEPQYDFNPIIDEWCKEAPKELDFNSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIP 234
E QY + I+ + D + + + + + + L
Sbjct: 12 GEHQYQYKDILSVFEDAFVDNFDCKDVQDMPKSILSKEEIDHIIMSKD--AVSGTLRLF- 68
Query: 235 EVIQSSETVLILEFMDGIRLNDCESL-EAFGV-NKQKVVEEITRAYAHQIYVDGFFNGDP 292
+ S + ++ +F++ + + + L +Q +TR Y Q D +N D
Sbjct: 69 WTLLSKQEEMVQKFVEEVLRINYKFLMSPIKTEQRQP--SMMTRMYIEQ--RDRLYN-DN 123
Query: 293 HPGNFLVSKDPPHRPILLDFGLTKKLSS----------SM----KQALAKMFFAAAEGDH 338
+K R L + L + K +A +
Sbjct: 124 QV----FAKYNVSRLQPYL-KLRQALLELRPAKNVLIDGVLGSGKTWVA----LDVCLSY 174
Query: 339 VALLSAFA------EMGLRLRLDVPEQAME-VSTLFFRTSAPANEAFETVKNLS---EQR 388
+ + + PE +E + L ++ + N+
Sbjct: 175 -KVQCKMDFKIFWLNLK---NCNSPETVLEMLQKLLYQIDPNWTSRSDHSSNIKLRIHSI 230
Query: 389 AKNLKVIQEKMKLNQ-----KEVKRFNPVDAFPGD--IVIFSRVLNLLRGLSSTMNVRIV 441
L+ + + V+ +AF I++ +R + LS+ I
Sbjct: 231 QAELRRLLKSKPYENCLLVLLNVQNAKAWNAFNLSCKILLTTRFKQVTDFLSAATTTHIS 290
Query: 442 YLDIMRPFAEY--------VLQVGINKEPSVSAEWIYSKPIH-SDVEAKLRDFLVELGND 492
L P E + + P S + +RD L N
Sbjct: 291 LDHHSMTLTPDEVKSLLLKYLDCRPQDLPR---EVLTTNPRRLSIIAESIRDGLATWDNW 347
Query: 493 GKILGIQVCAYKDGEVIIDTSAGMLGRYDPRPVQPD-SLFPVFSVTKGITAGMLHWLVDN 551
+ ++ II++S +L + R + S+FP S I +L + +
Sbjct: 348 KHVNCDKL------TTIIESSLNVLEPAEYRKMFDRLSVFPP-SAH--IPTILLSLIWFD 398
Query: 552 GKLKLEENIANIWPEFKSNGKDLIKVHHVLNHTSGLHNVSVDLSSENPLLICDWDECLNR 611
+ N K + L++ T + ++ ++L + + + L+R
Sbjct: 399 VIKSDVMVVVN-----KLHKYSLVE-KQPKESTISIPSIYLELKVK-----LENEYALHR 447
Query: 612 IAL---SAPETEPGQEQL-------------YH----------------YLSFGWLCGGI 639
+ + P+T + + +H +L F +L I
Sbjct: 448 SIVDHYNIPKTFDSDDLIPPYLDQYFYSHIGHHLKNIEHPERMTLFRMVFLDFRFLEQKI 507
Query: 640 IERASGKKFQEILEEGIIQPLSIDGELY 667
R + G I + Y
Sbjct: 508 --RHDSTAWN---ASGSILNTLQQLKFY 530
|
| >3i7j_A Beta-lactamase MB2281C; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 2.20A {Mycobacterium bovis} Length = 280 | Back alignment and structure |
|---|
Score = 82.4 bits (204), Expect = 2e-17
Identities = 33/174 (18%), Positives = 52/174 (29%), Gaps = 46/174 (26%)
Query: 487 VELGNDGKILGIQVCAYKDGEVIIDTSAGMLGRYDPRPVQPDSLFPVFSVTKGITAGMLH 546
+E+ + V+ +F + SVTK + A
Sbjct: 4 LEVLGGWPVPAAAAAVIGPAGVL------------ATHGDTARVFALASVTKPLVARAAQ 51
Query: 547 WLVDNGKLKLEENIANIWPEFKSNGKDLIKVHHVLNHTSGLHNVSVDLSSENPLLICDWD 606
V+ G + L+ G V H+L HTSGL
Sbjct: 52 VAVEEGVVNLDTPA----------GPPGSTVRHLLAHTSGL------------------- 82
Query: 607 ECLNRIALSAPETEPGQEQLYHYLSFGWLCGGIIERASGKKFQEILEEGIIQPL 660
+ PG ++Y F L ++R SG +F L E + +PL
Sbjct: 83 ----AMHSDQALARPGTRRMYSNYGFTVL-AESVQRESGIEFGRYLTEAVCEPL 131
|
Structure Templates Detected by HHsearch 
Original result of HHsearch against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 977 | |||
| 4gdn_A | 342 | Protein FLP; peptidase, alpha/beta, hydrolase; HET | 100.0 | |
| 3zyt_A | 372 | Esterase A, ESTA; hydrolase, enzymatic promiscuity | 100.0 | |
| 2drw_A | 363 | DAA, D-amino acid amidase; penicillin recognizing | 100.0 | |
| 3rju_A | 351 | Beta-lactamase/D-alanine carboxypeptidase; structu | 100.0 | |
| 1yqs_A | 349 | D-alanyl-D-alanine carboxypeptidase; cell well bio | 100.0 | |
| 2qz6_A | 358 | Beta-lactamase; psychrophIle, cold adaptation, ant | 100.0 | |
| 1zkj_A | 359 | CMY-10, extended-spectrum beta-lactamase; plasmid, | 100.0 | |
| 2wzx_A | 371 | Beta-lactamase; inhibitor, hydrolase, antibiotic r | 100.0 | |
| 2ffy_A | 358 | Beta-lactamase; AMPC, deacylation, transition stat | 100.0 | |
| 2qmi_A | 447 | PBP related beta-lactamase; PAB87, octamer, LU-HPD | 100.0 | |
| 1ci9_A | 392 | ESTB, protein (carboxylesterase); hydrolase, cabox | 100.0 | |
| 3tg9_A | 356 | Penicillin-binding protein; structural genomics, P | 100.0 | |
| 3o3v_A | 335 | Beta-lactamase, CLBP protein; alpha/beta, disulfid | 100.0 | |
| 3hlc_A | 432 | Transesterase, LOVD; alpha/beta hydrolase fold, tr | 100.0 | |
| 1ei5_A | 520 | D-aminopeptidase, DAP; penicillin binding protein, | 100.0 | |
| 2dcf_A | 392 | 6-aminohexanoate-dimer hydrolase; HET: ACA MES; 1. | 100.0 | |
| 4gb7_A | 422 | 6-aminohexanoate-dimer hydrolase; structural genom | 100.0 | |
| 3i7j_A | 280 | Beta-lactamase MB2281C; alpha-beta protein., struc | 100.0 | |
| 2y7j_A | 365 | Phosphorylase B kinase gamma catalytic chain, test | 99.87 | |
| 3c4z_A | 543 | Rhodopsin kinase; Ser/Thr kinase, RGS homology dom | 99.73 | |
| 4b9d_A | 350 | Serine/threonine-protein kinase NEK1; transferase, | 99.73 | |
| 4fih_A | 346 | Serine/threonine-protein kinase PAK 4; kinase doma | 99.73 | |
| 4fie_A | 423 | Serine/threonine-protein kinase PAK 4; kinase doma | 99.72 | |
| 4g3f_A | 336 | NF-kappa-beta-inducing kinase; non-RD kinase, prot | 99.68 | |
| 4aw0_A | 311 | HPDK1, 3-phosphoinositide-dependent protein kinase | 99.68 | |
| 3omv_A | 307 | RAF proto-oncogene serine/threonine-protein kinas; | 99.68 | |
| 2c30_A | 321 | Serine/threonine-protein kinase PAK 6; CRIB domain | 99.67 | |
| 4asz_A | 299 | BDNF/NT-3 growth factors receptor; transferase, TR | 99.66 | |
| 3fpq_A | 290 | Serine/threonine-protein kinase WNK1; protein seri | 99.66 | |
| 3hyh_A | 275 | Carbon catabolite-derepressing protein kinase; kin | 99.66 | |
| 4aoj_A | 329 | High affinity nerve growth factor receptor; transf | 99.65 | |
| 1zth_A | 258 | RIO1 serine protein kinase; ribosome biogenesis, r | 99.65 | |
| 3ubd_A | 304 | Ribosomal protein S6 kinase alpha-3; kinase-inhibi | 99.65 | |
| 4gt4_A | 308 | Tyrosine-protein kinase transmembrane receptor RO; | 99.64 | |
| 4gyi_A | 397 | RIO2 kinase; protein kinase, ADP complex, phosphoa | 99.63 | |
| 4g31_A | 299 | Eukaryotic translation initiation factor 2-alpha; | 99.63 | |
| 3hmm_A | 303 | TGF-beta receptor type-1; ALK5, kinase, inhibitor, | 99.62 | |
| 3byv_A | 377 | Rhoptry kinase; malaria, transferase, structural g | 99.58 | |
| 1zar_A | 282 | RIO2 kinase; serine kinase, winged-helix, RIO doma | 99.58 | |
| 4f9c_A | 361 | Cell division cycle 7-related protein kinase; Ser/ | 99.58 | |
| 4ase_A | 353 | Vascular endothelial growth factor receptor 2; tra | 99.56 | |
| 4b99_A | 398 | Mitogen-activated protein kinase 7; transferase, i | 99.55 | |
| 3uto_A | 573 | Twitchin; kinase, muscle sarcomere, transferase; H | 99.53 | |
| 3v5w_A | 689 | G-protein coupled receptor kinase 2; inhibitor com | 99.53 | |
| 1mqb_A | 333 | Ephrin type-A receptor 2; tyrosine protein kinase, | 99.53 | |
| 3com_A | 314 | Serine/threonine-protein kinase 4; MST1, STE20-lik | 99.52 | |
| 2x4f_A | 373 | Myosin light chain kinase family member 4; LUNG, b | 99.51 | |
| 4azs_A | 569 | Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15 | 99.5 | |
| 2vuw_A | 336 | Serine/threonine-protein kinase haspin; cell cycle | 99.5 | |
| 3fxz_A | 297 | Serine/threonine-protein kinase PAK 1; transferase | 99.49 | |
| 3e7e_A | 365 | HBUB1, BUB1A, mitotic checkpoint serine/threonine- | 99.47 | |
| 4hcu_A | 269 | Tyrosine-protein kinase ITK/TSK; transferase-trans | 99.47 | |
| 3gen_A | 283 | Tyrosine-protein kinase BTK; bruton'S tyrosine kin | 99.46 | |
| 3sxs_A | 268 | Cytoplasmic tyrosine-protein kinase BMX; transfera | 99.46 | |
| 3s95_A | 310 | LIMK-1, LIM domain kinase 1; structural genomics, | 99.46 | |
| 2qol_A | 373 | Ephrin receptor; receptor tyrosine kinase, juxtame | 99.46 | |
| 3ugc_A | 295 | Tyrosine-protein kinase JAK2; small molecule inhib | 99.46 | |
| 2vd5_A | 412 | DMPK protein; serine/threonine-protein kinase, kin | 99.45 | |
| 3cbl_A | 377 | C-FES, proto-oncogene tyrosine-protein kinase FES/ | 99.45 | |
| 3qd2_B | 332 | Eukaryotic translation initiation factor 2-alpha; | 99.45 | |
| 3zgw_A | 347 | Maternal embryonic leucine zipper kinase; transfer | 99.45 | |
| 3fe3_A | 328 | MAP/microtubule affinity-regulating kinase 3; seri | 99.45 | |
| 2qkw_B | 321 | Protein kinase; three-helix bundle motif, AVRPTO-P | 99.45 | |
| 3kul_A | 325 | Ephrin type-A receptor 8; ATP-binding, kinase, nuc | 99.45 | |
| 3txo_A | 353 | PKC-L, NPKC-ETA, protein kinase C ETA type; phosph | 99.44 | |
| 3op5_A | 364 | Serine/threonine-protein kinase VRK1; adenosine tr | 99.44 | |
| 3v8s_A | 410 | RHO-associated protein kinase 1; dimerization, myo | 99.44 | |
| 2zv2_A | 298 | Calcium/calmodulin-dependent protein kinase kinas; | 99.44 | |
| 3a62_A | 327 | Ribosomal protein S6 kinase beta-1; kinase domain, | 99.44 | |
| 4eqm_A | 294 | Protein kinase; transferase; HET: ANP; 3.00A {Stap | 99.44 | |
| 4aw2_A | 437 | Serine/threonine-protein kinase MRCK alpha; transf | 99.43 | |
| 1tki_A | 321 | Titin; serine kinase, muscle, autoinhibition; 2.00 | 99.43 | |
| 3kn6_A | 325 | Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1 | 99.43 | |
| 1qcf_A | 454 | Haematopoetic cell kinase (HCK); tyrosine kinase-i | 99.43 | |
| 3niz_A | 311 | Rhodanese family protein; structural genomics, str | 99.42 | |
| 1kob_A | 387 | Twitchin; kinase, intrasteric regulation; 2.30A {A | 99.42 | |
| 2nru_A | 307 | Interleukin-1 receptor-associated kinase 4; inhibi | 99.42 | |
| 3uqc_A | 286 | Probable conserved transmembrane protein; structur | 99.42 | |
| 2jii_A | 352 | Serine/threonine-protein kinase VRK3 molecule: VA | 99.42 | |
| 2psq_A | 370 | Fibroblast growth factor receptor 2; kinase domain | 99.42 | |
| 1mp8_A | 281 | Focal adhesion kinase 1; tyrosine protein kinase, | 99.42 | |
| 2izr_A | 330 | Casein kinase I isoform gamma-3; serine/threonine- | 99.41 | |
| 1o6l_A | 337 | RAC-beta serine/threonine protein kinase; protein | 99.41 | |
| 1vzo_A | 355 | Ribosomal protein S6 kinase alpha 5; protein kinas | 99.41 | |
| 1csn_A | 298 | Casein kinase-1; phosphotransferase; HET: ATP; 2.0 | 99.41 | |
| 1qpc_A | 279 | LCK kinase; alpha beta fold, transferase; HET: PTR | 99.41 | |
| 3t9t_A | 267 | Tyrosine-protein kinase ITK/TSK; kinase domain, al | 99.4 | |
| 1fot_A | 318 | TPK1 delta, CAMP-dependent protein kinase type 1; | 99.4 | |
| 1xjd_A | 345 | Protein kinase C, theta type; PKC-theta, ATP, AMP, | 99.4 | |
| 4e5w_A | 302 | Tyrosine-protein kinase JAK1; kinase domain, trans | 99.4 | |
| 4dc2_A | 396 | Protein kinase C IOTA type; kinase, substrate, cel | 99.4 | |
| 1fmk_A | 452 | C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyros | 99.4 | |
| 1rdq_E | 350 | PKA C-alpha, CAMP-dependent protein kinase, alpha- | 99.4 | |
| 3p1a_A | 311 | MYT1 kinase, membrane-associated tyrosine- and thr | 99.4 | |
| 3p86_A | 309 | Serine/threonine-protein kinase CTR1; ETR1, ERS1, | 99.4 | |
| 3uc3_A | 361 | Serine/threonine-protein kinase SRK2I; SNRK2, ABA | 99.4 | |
| 3tki_A | 323 | Serine/threonine-protein kinase CHK1; cell checkpo | 99.4 | |
| 3ork_A | 311 | Serine/threonine protein kinase; structural genomi | 99.39 | |
| 3lxl_A | 327 | Tyrosine-protein kinase JAK3; TYK2, inflammation, | 99.39 | |
| 2h8h_A | 535 | Proto-oncogene tyrosine-protein kinase SRC; SRC ki | 99.39 | |
| 2w1i_A | 326 | JAK2; chromosomal rearrangement, nucleotide-bindin | 99.39 | |
| 3uim_A | 326 | Brassinosteroid insensitive 1-associated receptor; | 99.39 | |
| 3a8x_A | 345 | Protein kinase C IOTA type; transferase; HET: TPO; | 99.39 | |
| 3cc6_A | 281 | Protein tyrosine kinase 2 beta; focal adhesion kin | 99.39 | |
| 1u59_A | 287 | Tyrosine-protein kinase ZAP-70; transferase; HET: | 99.39 | |
| 1ob3_A | 288 | PFPK5, cell division control protein 2 homolog; tr | 99.39 | |
| 2acx_A | 576 | G protein-coupled receptor kinase 6; GRK, G transf | 99.39 | |
| 3sv0_A | 483 | Casein kinase I-like; typical kinase domain fold, | 99.39 | |
| 1cm8_A | 367 | Phosphorylated MAP kinase P38-gamma; phosphorylati | 99.38 | |
| 3o0g_A | 292 | Cell division protein kinase 5; kinase activator c | 99.38 | |
| 3uzp_A | 296 | CKI-delta, CKID, casein kinase I isoform delta; CK | 99.38 | |
| 2i0e_A | 353 | Protein kinase C-beta II; serine/threonine protein | 99.38 | |
| 1luf_A | 343 | Muscle-specific tyrosine kinase receptor MUSK; pho | 99.38 | |
| 4hgt_A | 296 | Casein kinase I isoform delta; CK1D, inhibitor, tr | 99.38 | |
| 3c0i_A | 351 | Peripheral plasma membrane protein CASK; neurexin, | 99.38 | |
| 3tt0_A | 382 | Basic fibroblast growth factor receptor 1; kinase | 99.38 | |
| 3an0_A | 340 | Dual specificity mitogen-activated protein kinase; | 99.37 | |
| 1u5q_A | 348 | Serine/threonine protein kinase TAO2; transferase; | 99.37 | |
| 4fvq_A | 289 | Tyrosine-protein kinase JAK2; janus protein kinase | 99.37 | |
| 3dtc_A | 271 | Mitogen-activated protein kinase kinase kinase 9; | 99.37 | |
| 3en9_A | 540 | Glycoprotease, O-sialoglycoprotein endopeptidase/p | 99.37 | |
| 3a7i_A | 303 | MST3 kinase, serine/threonine kinase 24 (STE20 hom | 99.37 | |
| 3kex_A | 325 | Receptor tyrosine-protein kinase ERBB-3; kinase do | 99.36 | |
| 3q4u_A | 301 | Activin receptor type-1; structural genomics conso | 99.36 | |
| 2j7t_A | 302 | Serine/threonine-protein kinase 10; transferase, A | 99.36 | |
| 4euu_A | 319 | Serine/threonine-protein kinase TBK1; ATP binding, | 99.36 | |
| 3soa_A | 444 | Calcium/calmodulin-dependent protein kinase type a | 99.36 | |
| 1k9a_A | 450 | Carboxyl-terminal SRC kinase; COOH-terminal SRC ki | 99.36 | |
| 2w4o_A | 349 | Calcium/calmodulin-dependent protein kinase type I | 99.36 | |
| 3nsz_A | 330 | CK II alpha, casein kinase II subunit alpha; inhib | 99.36 | |
| 2y0a_A | 326 | Death-associated protein kinase 1; transferase, ca | 99.36 | |
| 1t46_A | 313 | HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcom | 99.36 | |
| 3l9p_A | 367 | Anaplastic lymphoma kinase; kinase domain, ATP-bin | 99.36 | |
| 4f0f_A | 287 | Serine/threonine-protein kinase ROCO4; LRRK2, ATP- | 99.36 | |
| 2a19_B | 284 | Interferon-induced, double-stranded RNA-activated | 99.36 | |
| 3lb7_A | 307 | RAF proto-oncogene serine/threonine-protein kinas; | 99.36 | |
| 2qr7_A | 342 | Ribosomal protein S6 kinase alpha-3; kinase domain | 99.36 | |
| 3h4j_B | 336 | AMPK kdaid, SNF1-like protein kinase SSP2; ATP-bin | 99.35 | |
| 2y94_A | 476 | 5'-AMP-activated protein kinase catalytic subunit; | 99.35 | |
| 3lxp_A | 318 | Non-receptor tyrosine-protein kinase TYK2; JAK3, i | 99.35 | |
| 3pfq_A | 674 | PKC-B, PKC-beta, protein kinase C beta type; phosp | 99.35 | |
| 3oz6_A | 388 | Mitogen-activated protein kinase 1, serine/threon | 99.35 | |
| 4fr4_A | 384 | YANK1, serine/threonine-protein kinase 32A; struct | 99.35 | |
| 2ac3_A | 316 | MAP kinase-interacting serine/threonine kinase 2; | 99.35 | |
| 2ozo_A | 613 | Tyrosine-protein kinase ZAP-70; inactive ZAP-70, t | 99.35 | |
| 2pvf_A | 334 | Fibroblast growth factor receptor 2; kinase domain | 99.35 | |
| 3soc_A | 322 | Activin receptor type-2A; structural genomics cons | 99.35 | |
| 3i6u_A | 419 | CDS1, serine/threonine-protein kinase CHK2; Ser/Th | 99.35 | |
| 2r5t_A | 373 | Serine/threonine-protein kinase SGK1; AGC protein | 99.35 | |
| 4ejn_A | 446 | RAC-alpha serine/threonine-protein kinase; AKT1, a | 99.35 | |
| 3qup_A | 323 | Tyrosine-protein kinase receptor TYRO3; protein ki | 99.35 | |
| 2ycf_A | 322 | Serine/threonine-protein kinase CHK2; transferase, | 99.35 | |
| 3f3z_A | 277 | Calcium/calmodulin-dependent protein kinase with d | 99.35 | |
| 3mtl_A | 324 | Cell division protein kinase 16; pctaire1, indirub | 99.35 | |
| 3fdn_A | 279 | Serine/threonine-protein kinase 6; aurora kinase i | 99.35 | |
| 1opk_A | 495 | P150, C-ABL, proto-oncogene tyrosine-protein kinas | 99.35 | |
| 2pmi_A | 317 | Negative RE, cyclin-dependent protein kinase PHO85 | 99.35 | |
| 3n9x_A | 432 | Phosphotransferase; malaria kinase, structural gen | 99.34 | |
| 1rjb_A | 344 | FL cytokine receptor; kinase, structure, autoinhib | 99.34 | |
| 1x8b_A | 289 | WEE1HU, WEE1-like protein kinase; cell cycle, tran | 99.34 | |
| 4fl3_A | 635 | Tyrosine-protein kinase SYK; transferase; HET: ANP | 99.34 | |
| 3kfa_A | 288 | Tyrosine-protein kinase ABL1; CML, drug resistance | 99.34 | |
| 1nxk_A | 400 | MAP kinase-activated protein kinase 2; MK2, phosph | 99.34 | |
| 2h6d_A | 276 | 5'-AMP-activated protein kinase catalytic subunit | 99.34 | |
| 2bdw_A | 362 | Hypothetical protein K11E8.1D; kinase, calmodulin | 99.34 | |
| 2yab_A | 361 | Death-associated protein kinase 2; apoptosis, tran | 99.34 | |
| 4agu_A | 311 | Cyclin-dependent kinase-like 1; transferase, phosp | 99.34 | |
| 3cok_A | 278 | Serine/threonine-protein kinase PLK4; POLO-like ki | 99.34 | |
| 1p4o_A | 322 | Insulin-like growth factor I receptor protein; IGF | 99.34 | |
| 2v62_A | 345 | Serine/threonine-protein kinase VRK2; transferase, | 99.33 | |
| 3mdy_A | 337 | Bone morphogenetic protein receptor type-1B; compl | 99.33 | |
| 3vhe_A | 359 | Vascular endothelial growth factor receptor 2; kin | 99.33 | |
| 3f66_A | 298 | Hepatocyte growth factor receptor; C-Met, protein | 99.33 | |
| 1ua2_A | 346 | CAK, cell division protein kinase 7; cell cycle, p | 99.33 | |
| 3og7_A | 289 | AKAP9-BRAF fusion protein; proto-oncogene, V600E, | 99.33 | |
| 1xbb_A | 291 | Tyrosine-protein kinase SYK; gleevec, STI-571, ima | 99.33 | |
| 2ivs_A | 314 | Proto-oncogene tyrosine-protein kinase receptor RE | 99.33 | |
| 3g33_A | 308 | Cell division protein kinase 4; Ser/Thr protein ki | 99.33 | |
| 3lm5_A | 327 | Serine/threonine-protein kinase 17B; STK17B, serin | 99.33 | |
| 4aaa_A | 331 | Cyclin-dependent kinase-like 2; transferase, phosp | 99.33 | |
| 3q60_A | 371 | ROP5B; pseudokinase, transferase; HET: ATP; 1.72A | 99.33 | |
| 2wqm_A | 310 | Serine/threonine-protein kinase NEK7; ATP-binding, | 99.33 | |
| 3ttj_A | 464 | Mitogen-activated protein kinase 10; JNK3, protein | 99.33 | |
| 1u46_A | 291 | ACK-1, activated CDC42 kinase 1; tyrosine kinase, | 99.33 | |
| 3eqc_A | 360 | Dual specificity mitogen-activated protein kinase; | 99.33 | |
| 1byg_A | 278 | CSK, protein (C-terminal SRC kinase); protein kina | 99.33 | |
| 1phk_A | 298 | Phosphorylase kinase; glycogen metabolism, transfe | 99.33 | |
| 2yex_A | 276 | Serine/threonine-protein kinase CHK1; transferase, | 99.33 | |
| 3gni_B | 389 | Strad alpha; kinase fold, pseudokinase, alpha heli | 99.32 | |
| 3dbq_A | 343 | Dual specificity protein kinase TTK; MPS1 structur | 99.32 | |
| 2xir_A | 316 | Vascular endothelial growth factor receptor 2; ang | 99.32 | |
| 2fst_X | 367 | Mitogen-activated protein kinase 14; active mutant | 99.32 | |
| 1zy4_A | 303 | Serine/threonine-protein kinase GCN2; translation | 99.32 | |
| 3poz_A | 327 | Epidermal growth factor receptor; kinase domain, a | 99.32 | |
| 2eue_A | 275 | Carbon catabolite derepressing protein kinase; kin | 99.31 | |
| 4eut_A | 396 | Serine/threonine-protein kinase TBK1; ATP binding, | 99.31 | |
| 3is5_A | 285 | Calcium-dependent protein kinase; CDPK, structural | 99.31 | |
| 2owb_A | 335 | Serine/threonine-protein kinase PLK1; catalytic do | 99.31 | |
| 3kk8_A | 284 | Calcium/calmodulin dependent protein kinase II; AT | 99.31 | |
| 2vx3_A | 382 | Dual specificity tyrosine-phosphorylation- regula | 99.31 | |
| 3hko_A | 345 | Calcium/calmodulin-dependent protein kinase with d | 99.31 | |
| 2a2a_A | 321 | Death-associated protein kinase 2; autoinhibition, | 99.31 | |
| 3kvw_A | 429 | DYRK2, dual specificity tyrosine-phosphorylation-r | 99.31 | |
| 1b6c_B | 342 | TGF-B superfamily receptor type I; complex (isomer | 99.31 | |
| 3rp9_A | 458 | Mitogen-activated protein kinase; structural genom | 99.31 | |
| 3bhy_A | 283 | Death-associated protein kinase 3; death associate | 99.31 | |
| 3mi9_A | 351 | Cell division protein kinase 9; P-TEFB, HIV-1, pro | 99.31 | |
| 2x7f_A | 326 | TRAF2 and NCK-interacting protein kinase; serine/t | 99.3 | |
| 3pg1_A | 362 | Mitogen-activated protein kinase, putative (MAP K | 99.3 | |
| 2rku_A | 294 | Serine/threonine-protein kinase PLK1; structure of | 99.3 | |
| 3g2f_A | 336 | Bone morphogenetic protein receptor type-2; kinase | 99.3 | |
| 3c1x_A | 373 | Hepatocyte growth factor receptor; receptor tyrosi | 99.3 | |
| 2zmd_A | 390 | Dual specificity protein kinase TTK; MPS1, T686A, | 99.3 | |
| 3qyz_A | 364 | Mitogen-activated protein kinase 1; transferase, s | 99.3 | |
| 2eva_A | 307 | TAK1 kinase - TAB1 chimera fusion protein; transfe | 99.3 | |
| 2h34_A | 309 | Serine/threonine-protein kinase PKNE; apoenzyme, t | 99.3 | |
| 1z57_A | 339 | Dual specificity protein kinase CLK1; protein tyro | 99.3 | |
| 2eu9_A | 355 | Dual specificity protein kinase CLK3; kinase domai | 99.3 | |
| 4exu_A | 371 | Mitogen-activated protein kinase 13; P38 kinase, t | 99.3 | |
| 2iwi_A | 312 | Serine/threonine-protein kinase PIM-2; nucleotide- | 99.29 | |
| 2b9h_A | 353 | MAP kinase FUS3, mitogen-activated protein kinase | 99.29 | |
| 2clq_A | 295 | Mitogen-activated protein kinase kinase kinase 5; | 99.29 | |
| 2buj_A | 317 | Serine/threonine-protein kinase 16; transferase, A | 99.29 | |
| 3coi_A | 353 | Mitogen-activated protein kinase 13; P38D, P38delt | 99.29 | |
| 3m2w_A | 299 | MAP kinase-activated protein kinase 2; small molec | 99.29 | |
| 3llt_A | 360 | Serine/threonine kinase-1, pflammer; lammer kinase | 99.29 | |
| 2xrw_A | 371 | Mitogen-activated protein kinase 8; transcription, | 99.29 | |
| 2wtk_C | 305 | Serine/threonine-protein kinase 11; transferase-me | 99.29 | |
| 2w5a_A | 279 | Serine/threonine-protein kinase NEK2; Ser/Thr prot | 99.28 | |
| 3rgf_A | 405 | Cyclin-dependent kinase 8; protein kinase complex, | 99.28 | |
| 2vgo_A | 284 | Serine/threonine-protein kinase 12-A; nucleotide-b | 99.28 | |
| 1blx_A | 326 | Cyclin-dependent kinase 6; inhibitor protein, cycl | 99.28 | |
| 3pls_A | 298 | Macrophage-stimulating protein receptor; protein k | 99.28 | |
| 3brb_A | 313 | Proto-oncogene tyrosine-protein kinase MER; ATP-bi | 99.28 | |
| 2jam_A | 304 | Calcium/calmodulin-dependent protein kinase type 1 | 99.28 | |
| 2i6l_A | 320 | Mitogen-activated protein kinase 6; MAPK6, ERK3, e | 99.28 | |
| 2i1m_A | 333 | Macrophage colony-stimulating factor 1 receptor; k | 99.28 | |
| 3gxj_A | 303 | TGF-beta receptor type-1; ALK5, kinase, inhibitor, | 99.28 | |
| 3gbz_A | 329 | Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide- | 99.28 | |
| 3lzb_A | 327 | Epidermal growth factor receptor; epidermal growth | 99.28 | |
| 3mwu_A | 486 | Calmodulin-domain protein kinase 1; serine/threoni | 99.27 | |
| 1wak_A | 397 | Serine/threonine-protein kinase SPRK1; SRPK, trans | 99.27 | |
| 3dls_A | 335 | PAS domain-containing serine/threonine-protein KI; | 99.27 | |
| 3fme_A | 290 | Dual specificity mitogen-activated protein kinase; | 99.26 | |
| 2pzi_A | 681 | Probable serine/threonine-protein kinase PKNG; ATP | 99.26 | |
| 3eb0_A | 383 | Putative uncharacterized protein; kinase cryptospo | 99.26 | |
| 2r3i_A | 299 | Cell division protein kinase 2; serine/threonine-p | 99.26 | |
| 2pml_X | 348 | PFPK7, Ser/Thr protein kinase; phosphorylati trans | 99.26 | |
| 2j0j_A | 656 | Focal adhesion kinase 1; cell migration, FERM, tra | 99.26 | |
| 3a99_A | 320 | Proto-oncogene serine/threonine-protein kinase PI; | 99.25 | |
| 2wei_A | 287 | Calmodulin-domain protein kinase 1, putative; nucl | 99.25 | |
| 3lij_A | 494 | Calcium/calmodulin dependent protein kinase with A | 99.25 | |
| 2yfx_A | 327 | Tyrosine-protein kinase receptor; nucleotide-bindi | 99.25 | |
| 2vwi_A | 303 | Serine/threonine-protein kinase OSR1; STE kinase, | 99.25 | |
| 3fhr_A | 336 | MAP kinase-activated protein kinase 3; kinase-inhi | 99.24 | |
| 3q5i_A | 504 | Protein kinase; CDPK, malaria, phosphotransferase, | 99.24 | |
| 3nyv_A | 484 | Calmodulin-domain protein kinase 1; serine/threoni | 99.24 | |
| 1j1b_A | 420 | Glycogen synthase kinase-3 beta; complex, TAU, AMP | 99.23 | |
| 3ll6_A | 337 | Cyclin G-associated kinase; transferase, protein k | 99.23 | |
| 1t4h_A | 290 | Serine/threonine-protein kinase WNK1; protein seri | 99.22 | |
| 1fvr_A | 327 | Tyrosine-protein kinase TIE-2; tyrosine kinase, tr | 99.22 | |
| 2cc1_A | 262 | Beta-lactamase, penicillinase; hydrolase, antibiot | 99.21 | |
| 3cek_A | 313 | Dual specificity protein kinase TTK; HMPS1, PYT, E | 99.21 | |
| 3e3p_A | 360 | Protein kinase, putative glycogen synthase kinase; | 99.2 | |
| 3aln_A | 327 | Dual specificity mitogen-activated protein kinase; | 99.2 | |
| 2rio_A | 434 | Serine/threonine-protein kinase/endoribonuclease I | 99.19 | |
| 2dyl_A | 318 | Dual specificity mitogen-activated protein kinase | 99.19 | |
| 4e7w_A | 394 | Glycogen synthase kinase 3; GSK3, PTyr195, transfe | 99.19 | |
| 3p23_A | 432 | Serine/threonine-protein kinase/endoribonuclease; | 99.19 | |
| 3kmu_A | 271 | ILK, integrin-linked kinase; cell adhesion, ANK re | 99.15 | |
| 1q8y_A | 373 | SR protein kinase; transferase; HET: ADP ADE; 2.05 | 99.13 | |
| 2y4i_B | 319 | KSR2, HKSR2, kinase suppressor of RAS 2; transfera | 99.12 | |
| 1nd4_A | 264 | Aminoglycoside 3'-phosphotransferase; protein kina | 99.12 | |
| 3dzo_A | 413 | Rhoptry kinase domain; parasitic disease, transfer | 99.08 | |
| 3qa8_A | 676 | MGC80376 protein; kinase ubiquitin-like domain, ph | 99.08 | |
| 3tm0_A | 263 | Aminoglycoside 3'-phosphotransferase; protein kina | 98.96 | |
| 1bsg_A | 266 | Beta lactamase, penicillinase; hydrolase, antibiot | 98.94 | |
| 3d1u_A | 288 | Putative fructosamine-3-kinase; YP_290396.1, struc | 98.93 | |
| 2j9o_A | 298 | TLL2115 protein; penicillin-binding protein, hydro | 98.9 | |
| 1hzo_A | 271 | Beta-lactamase; mixed alpha/beta, cephalosporinase | 98.88 | |
| 2qpn_A | 287 | Beta-lactamase GES-1; APO-enzyme, plasmid, hydrola | 98.81 | |
| 2p74_A | 263 | Beta-lactamase CTX-M-9A; ultra-high resolution, ac | 98.76 | |
| 1e25_A | 282 | Extended-spectrum beta-lactamase PER-1; hydrolase, | 98.76 | |
| 1g6a_A | 271 | Beta-lactamase PSE-4; class A beta-lactamase, carb | 98.76 | |
| 3dxp_A | 359 | Putative acyl-COA dehydrogenase; protein kinase-li | 98.72 | |
| 1m40_A | 263 | TEM-1, beta-lactamase TEM; acylation mechanism, ul | 98.72 | |
| 1bue_A | 265 | Protein (imipenem-hydrolysing beta-lactamase); hyd | 98.72 | |
| 1o7e_A | 276 | L2 beta lactamase; hydrolase, class A; 1.51A {Sten | 98.7 | |
| 3c5a_A | 264 | Class A carbapenemase KPC-2; beta-lactamase, C-ter | 98.67 | |
| 3f7w_A | 288 | Putative fructosamine-3-kinase; YP_290396.1, struc | 98.62 | |
| 1n9b_A | 265 | Penicillinase, beta-lactamase SHV-2; beta-lactam h | 98.61 | |
| 4gkh_A | 272 | Aminoglycoside 3'-phosphotransferase APHA1-IAB; py | 98.56 | |
| 3r70_A | 320 | Aminoglycoside phosphotransferase; structural geno | 98.54 | |
| 2wk0_A | 265 | Beta-lactamase; hydrolase, iodopenicillanate, anti | 98.52 | |
| 3sg8_A | 304 | APH(2'')-ID; antibiotic resistance enzyme, transfe | 98.48 | |
| 1tvf_A | 369 | PBP4, penicillin binding protein 4; structural gen | 98.47 | |
| 1w7f_A | 307 | Beta-lactamase; hydrolase, isocitrate, bacillus li | 98.45 | |
| 3ovc_A | 362 | Hygromycin-B 4-O-kinase; aminoglycoside phosphotra | 98.45 | |
| 3a3j_A | 344 | PBP5; penicillin binding protein 5, DACA, hydrolas | 98.41 | |
| 3jr1_A | 312 | Putative fructosamine-3-kinase; YP_719053.1, struc | 98.39 | |
| 2olc_A | 397 | MTR kinase, methylthioribose kinase; kinase ADP-2H | 98.39 | |
| 3tdw_A | 306 | Gentamicin resistance protein; kinase, phosphoryl | 98.29 | |
| 3dw0_A | 294 | Class A carbapenemase KPC-2; beta-lactamase, antib | 98.25 | |
| 2q83_A | 346 | YTAA protein; 2635576, structural genomics, joint | 98.22 | |
| 3ats_A | 357 | Putative uncharacterized protein; hypothetical pro | 98.22 | |
| 4ewf_A | 275 | Beta-lactamase; ABA-sandwich, structural genomics, | 98.16 | |
| 4euz_A | 283 | Carbapenem-hydrolizing beta-lactamase SFC-1; carba | 98.16 | |
| 2wuq_A | 318 | BLAB, beta-lactamase regulatory protein BLAB; clas | 98.15 | |
| 1ghp_A | 258 | Beta-lactamase, penicillinase; hydrolase, antibiot | 98.13 | |
| 3p09_A | 290 | Beta-lactamase; structural genomics, center for st | 98.12 | |
| 1es5_A | 262 | DD-transpeptidase; penicillin-binding, serine pept | 98.08 | |
| 2ppq_A | 322 | HSK, HK, homoserine kinase; structural genomics, M | 98.01 | |
| 4hes_A | 275 | Beta-lactamase class A-like protein; structural ge | 97.96 | |
| 1xp4_A | 379 | D-alanyl-D-alanine carboxypeptidase; five-stranded | 97.94 | |
| 3i1a_A | 339 | Spectinomycin phosphotransferase; protein kinase, | 97.93 | |
| 1zyl_A | 328 | Hypothetical protein YIHE; putative protein kinase | 97.91 | |
| 3csv_A | 333 | Aminoglycoside phosphotransferase; YP_614837.1, ph | 97.86 | |
| 3dxq_A | 301 | Choline/ethanolamine kinase family protein; NP_106 | 97.83 | |
| 3c5i_A | 369 | Choline kinase; choline, kinase, malaria, transfer | 97.83 | |
| 2pyw_A | 420 | Uncharacterized protein; 5-methylthioribose kinase | 97.76 | |
| 3ita_A | 352 | D-alanyl-D-alanine carboxypeptidase DACC; ppenicil | 97.72 | |
| 1alq_A | 266 | CP254 beta-lactamase; hydrolase, circular permuted | 97.7 | |
| 3mzf_A | 363 | D-alanyl-D-alanine carboxypeptidase DACA; beta-lac | 97.68 | |
| 1nw1_A | 429 | Choline kinase (49.2 KD); phospholipid synthesis, | 97.65 | |
| 3qhy_A | 271 | Beta-lactamase; enyzme-inhibitor complex, beta-pro | 97.62 | |
| 3feg_A | 379 | Choline/ethanolamine kinase; non-protein kinase, c | 97.6 | |
| 3ny4_A | 265 | Beta-lactamase, penicillinase; penicillin binding | 97.57 | |
| 3hun_A | 453 | Penicillin-binding protein 4; ampicillin, beta-lac | 97.29 | |
| 3mes_A | 424 | Choline kinase; malaria, structural genomics, stru | 97.28 | |
| 2qg7_A | 458 | Ethanolamine kinase PV091845; malaria, SGC, struct | 97.24 | |
| 3lez_A | 260 | Beta-lactamase; antibiotic resistance, halotoleran | 97.23 | |
| 4dxb_A | 637 | RG13, maltose-binding periplasmic protein, beta-la | 97.08 | |
| 3f2s_A | 401 | CK, chetk-alpha, choline kinase alpha; non-protein | 96.85 | |
| 3mfd_A | 334 | D-alanyl-D-alanine carboxypeptidase DACB; penicill | 96.75 | |
| 2bcf_A | 276 | Probable D-alanyl-D-alanine carboxypeptidase DACB2 | 95.32 | |
| 3g15_A | 401 | CK, chetk-alpha, choline kinase alpha; non-protein | 95.18 | |
| 3cjm_A | 282 | Putative beta-lactamase; NP_815223.1, structural g | 94.82 | |
| 2x02_A | 248 | Beta-lactamase OXA-10; class D, hydrolase, antibio | 93.12 | |
| 2xep_A | 458 | ORF12; hydrolase; 1.50A {Streptomyces clavuligerus | 92.08 | |
| 1cja_A | 342 | Protein (actin-fragmin kinase); transferase; HET: | 91.9 |
| >4gdn_A Protein FLP; peptidase, alpha/beta, hydrolase; HET: PE4; 3.20A {Staphylococcus aureus} | Back alignment and structure |
|---|
Probab=100.00 E-value=8.8e-51 Score=459.48 Aligned_cols=245 Identities=18% Similarity=0.232 Sum_probs=202.4
Q ss_pred hHHHHHHHHHHHhccCCCccceEEEEEecCeeEEEeeccccCCCCCCCCCCCCcceeecchHHHHHHHHHHHHHCCCcCc
Q 002031 477 DVEAKLRDFLVELGNDGKILGIQVCAYKDGEVIIDTSAGMLGRYDPRPVQPDSLFPVFSVTKGITAGMLHWLVDNGKLKL 556 (977)
Q Consensus 477 ~~~~~l~~~l~~~~~~~~~pG~svaVv~~g~~v~~~~~G~~~~~~~~~~t~~T~f~i~SiTK~~ta~~v~~lv~~G~l~l 556 (977)
+..+++++++++.++++.+||++|+|+++|+++++++||+++.+.+.|++++|+|+|||+||+|||+++++|+|+|+|+|
T Consensus 10 ~~~~~id~~i~~~~~~~~~pG~sv~V~~~g~~v~~~~~G~ad~~~~~~~~~~T~f~iaSvtK~~Ta~~i~~Lve~G~l~L 89 (342)
T 4gdn_A 10 DSQQQIDKIIEHDLQKGHIPGASILIVKNGKVFLNKGYGYQDVDKKVKASPTTKYEIASNTKAFTGLAILKLAQEGRLNL 89 (342)
T ss_dssp CSSCSHHHHHHHHHHHHTCSEEEEEEEETTEEEEEEEEEEEETTTTEECCTTCEEECGGGGHHHHHHHHHHHHHHTSSCT
T ss_pred HHHHHHHHHHHHHHHcCCCCEEEEEEEECCEEEEEEEEEEeccCCCCCCCCCCEEeeeeHHHHHHHHHHHHHHHcCCcch
Confidence 44467888888888889999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCchhhhccccccC---CCCCCcHHHHhcCcCCCCCCcCCCCCCCCcCCCCHHHHHHHHHccCCCCCCCCceecccCcHH
Q 002031 557 EENIANIWPEFKSN---GKDLIKVHHVLNHTSGLHNVSVDLSSENPLLICDWDECLNRIALSAPETEPGQEQLYHYLSFG 633 (977)
Q Consensus 557 d~~v~~ylP~~~~~---~~~~iTir~LLsHtSGl~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~pG~~~~Ysn~~~~ 633 (977)
||||.+|||+|... ..++|||||||+|||||+.+...... ........+++++.+...++.++||++|.|||.||.
T Consensus 90 dd~v~~ylP~~~~~~~~~~~~ITir~LL~HtSGl~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~PG~~~~Ysn~~y~ 168 (342)
T 4gdn_A 90 NDDVSKHVPHFKMNYNGQNETITIKQLLAQTSGIPSDITSEDA-VTNKNNRLNDVTRAIMGDELHHKPGEEFEYSNMNYD 168 (342)
T ss_dssp TSBGGGTSTTCCCEETTEECCCBHHHHHHTCSCCCCSCTTCSS-CCSSCCCSSCCHHHHHTSCCSSSTTSSCCCCHHHHH
T ss_pred hheeeecCCccccccccCCCceEEeecccccCCCCCccccccc-cccccccHHHHHHHHhhCCCcCCCCceeeecCcccc
Confidence 99999999999642 34689999999999999976433221 111233456788888999999999999999999999
Q ss_pred HHHHHHHHHHhCCCHHHHHHHHcccccCCCCccCCCCCCCcccCcceecccCCccccccCCCCCCCCCCCCCCCcchhhh
Q 002031 634 WLCGGIIERASGKKFQEILEEGIIQPLSIDGELYIGIPPGVESRLASLTIDTDDLNKVSGINNRPDLRLPSSFQPDKISQ 713 (977)
Q Consensus 634 ~llg~iiE~vtG~~~~~~l~~~if~PLGm~~t~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~p~~~~p~~~~~~~~~~ 713 (977)
|||.|||++||++|++|++++||+||||++|.|. .++....+.+.+|..........
T Consensus 169 -lLg~iie~vtg~~~~~~~~~~i~~PLgm~~t~~~-~~~~~~~~~a~gy~~~~~~~~~~--------------------- 225 (342)
T 4gdn_A 169 -LLGLIIQNVTKQSYTKYITNSWLKPLHMTHTSFK-QTNNKSKHDAIGYELQGSTPVVS--------------------- 225 (342)
T ss_dssp -HHHHHHHHHHTSCHHHHHHHHTTTTTTCTTCEEC-CSCCCCSSBCCCEEEETTEEEEC---------------------
T ss_pred -hHHHHHHHHHCcCHHHHHHHHHhcccCCCCcccC-CCcccccccceeeeecCCccccc---------------------
Confidence 9999999999999999999999999999999764 34444556666664332211111
Q ss_pred hhhcccccccchhccccccCccceecCHHHHHHHHHHHHcCC
Q 002031 714 LAAITPAVFNMLNIRRAIIPAANGHCSARALARYYAALADGG 755 (977)
Q Consensus 714 ~~~~~~~~~~~~~~~~~~~~agG~~sTa~Dlar~~~~ll~~g 755 (977)
.+.+.....|+||++||++||+||++++++++
T Consensus 226 ----------~~~~~~~~~~aggl~st~~Dl~~~~~~~l~~~ 257 (342)
T 4gdn_A 226 ----------KPEFNLWDTPSAYMMTSTEDLEHWIKFQLNPP 257 (342)
T ss_dssp ----------CCCCCGGGHHHHCEEEEHHHHHHHHHHHHSCC
T ss_pred ----------cccccccchhccccccCHHHHHHHHHHHcCCC
Confidence 11222334588999999999999999999865
|
| >3zyt_A Esterase A, ESTA; hydrolase, enzymatic promiscuity, beta-lactamase; 2.45A {Arthrobacter nitroguajacolicus} | Back alignment and structure |
|---|
Probab=100.00 E-value=7.8e-49 Score=448.22 Aligned_cols=350 Identities=27% Similarity=0.372 Sum_probs=260.2
Q ss_pred HHHHHHHHHhccCCCccceEEEEEecCeeEEEeeccccCCCCCCCCCCCCcceeecchHHHHHHHHHHHHHCCCcCcCCc
Q 002031 480 AKLRDFLVELGNDGKILGIQVCAYKDGEVIIDTSAGMLGRYDPRPVQPDSLFPVFSVTKGITAGMLHWLVDNGKLKLEEN 559 (977)
Q Consensus 480 ~~l~~~l~~~~~~~~~pG~svaVv~~g~~v~~~~~G~~~~~~~~~~t~~T~f~i~SiTK~~ta~~v~~lv~~G~l~ld~~ 559 (977)
+.+++.+++.++++.+||++|+|+++|+.+.+.+.| .|+++||+|+|+|+||+|||+++++|+|+|+|+||+|
T Consensus 11 e~v~~~~~~~~~~~~~~GaavaV~~~G~~v~d~~~g-------~p~~~dt~f~i~S~tK~~ta~~~~~lv~~G~l~ld~~ 83 (372)
T 3zyt_A 11 EPVAELFGVFLEQDPDYSAQVAAYHRGVKVLDLSGG-------PHIRPDSVTGVFSCSKGMAGLVMALLVQDGELDLEAE 83 (372)
T ss_dssp HHHHHHHHHHHHHCTTCCEEEEEEETTEEEEEEEES-------TTCCTTCBEECTTHHHHHHHHHHHHHHHTTSCCTTSB
T ss_pred HHHHHHHHHHHHcCCCceEEEEEEECCEEEEECCCC-------CCCCCCCEEEeeehHHHHHHHHHHHHHHCCCCCCCCc
Confidence 456666777777799999999999999988877665 7899999999999999999999999999999999999
Q ss_pred hhhhccccccCCCCCCcHHHHhcCcCCCCCCcCCCCCCCCcCCCCHHHHHHHHHccCCCCCCCCceecccCcHHHHHHHH
Q 002031 560 IANIWPEFKSNGKDLIKVHHVLNHTSGLHNVSVDLSSENPLLICDWDECLNRIALSAPETEPGQEQLYHYLSFGWLCGGI 639 (977)
Q Consensus 560 v~~ylP~~~~~~~~~iTir~LLsHtSGl~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~pG~~~~Ysn~~~~~llg~i 639 (977)
|++|||+|...++++|||||||+||||++.+..... .....+.+++++.+...++.++||+.|.|||.+|.+|+|.|
T Consensus 84 v~~~lP~~~~~~~~~iTi~~LL~htsGl~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~pg~~~~Ysn~~~~~l~g~i 160 (372)
T 3zyt_A 84 VVKYWPEFGVEGKSSITVAQLLSHRAGLLGVEGGLT---LHEVNNSELAAAKLAELPPLWKPGTAFGYHALTIGIFMEEL 160 (372)
T ss_dssp GGGTCGGGGTTTTSSCBHHHHTTTCSCCCCCTTCCC---HHHHHTTHHHHHHHHTSCCSSCSSSCBCCCTTHHHHHHHHH
T ss_pred hHHhCcccccCCCCCccHHHHhhcCCCCCCcccccc---ccccCCHHHHHHHHHhCCCcCCCCCceeecCCcHHHHHHHH
Confidence 999999999888889999999999999998644321 12244667889999999999999999999999996356999
Q ss_pred HHHHhCCCHHHHHHHHcccccCCCCccCCCCCCCcccCcceecccCCccccccCCCCCCCCCCCCCCCcchhhhhhhccc
Q 002031 640 IERASGKKFQEILEEGIIQPLSIDGELYIGIPPGVESRLASLTIDTDDLNKVSGINNRPDLRLPSSFQPDKISQLAAITP 719 (977)
Q Consensus 640 iE~vtG~~~~~~l~~~if~PLGm~~t~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~p~~~~p~~~~~~~~~~~~~~~~ 719 (977)
||++||++|++|++++||+||||++|++ .++....+++..+.......... . +................
T Consensus 161 ie~~tg~~~~~~~~~~i~~PLgm~~t~~--~p~~~~~r~a~~~~~~~~~~~~~----~-----~~~~~~~~~~~~~~~~~ 229 (372)
T 3zyt_A 161 CRRITGSTLQEVFEQRIRAVTGANFYLG--LPESEESRFAQFRWAADPSWPWV----D-----PASHFGLAANAAVGDIL 229 (372)
T ss_dssp HHHHHSSCHHHHHHHHTHHHHTCSEESS--CCGGGGGGBCCCBCCCCTTCCCC----C-----TTSHHHHHTTTTTCCGG
T ss_pred HHHHHCCCHHHHHHHhhhcccCCccccc--CChhhhhcceeeecccCCCcccc----c-----ccccccccccccccccc
Confidence 9999999999999999999999987755 56666677776654433221111 0 00000000000111122
Q ss_pred ccccchhccccccCccceecCHHHHHHHHHHHHcC--CCCCCCCCCCCCCCCCCCCCCCCCCCccccccccchhHHHHHH
Q 002031 720 AVFNMLNIRRAIIPAANGHCSARALARYYAALADG--GVVPPPHSRLSKPPLGSHPHIPKFPSHETSKKQKGTKKELLAA 797 (977)
Q Consensus 720 ~~~~~~~~~~~~~~agG~~sTa~Dlar~~~~ll~~--g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 797 (977)
...+...|.....++||+++|++||+||+++++++ |.+.+++ -++++++++
T Consensus 230 ~~~~~~~~~~~~~~aggl~sTa~Dlar~~~~ll~g~~G~~~~~~---------------------------~l~~~~~~~ 282 (372)
T 3zyt_A 230 DLPNIREVRAAGLSSAAGVASAEGMARIYAAALTGLEGKSAMPP---------------------------LLTEETIRT 282 (372)
T ss_dssp GGGGSHHHHHHCCTTTCCEECHHHHHHHHHHHHTCBCGGGCBCC---------------------------SSCHHHHHH
T ss_pred ccccchhhhcccccccccccCHHHHHHHHHHHHhCCCCCcCCcc---------------------------cCcHHHHHH
Confidence 23445556667789999999999999999999996 4444442 244556666
Q ss_pred HhhccCCCCCCcccccCCCCCccccccCcchhhhhhhcccCCCCCCCccCCCCCCCCCCcccccccCCCcccccccCCCC
Q 002031 798 LKNKTNNSEHGHKYTKDLEGGSHIRTASGDTYARLINIETSSSNTSTTDSISNTDEPQSSNVRKIFNNPRIHDAFLGVGD 877 (977)
Q Consensus 798 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 877 (977)
|.. ++ ... .+...
T Consensus 283 ~~~----------------------------------~~-------------------~~~----------~d~~~---- 295 (372)
T 3zyt_A 283 VSA----------------------------------EQ-------------------VFG----------IDRVF---- 295 (372)
T ss_dssp HHS----------------------------------CC-------------------EEE----------EBTTT----
T ss_pred Hhc----------------------------------cC-------------------CCC----------CCccc----
Confidence 621 00 000 00000
Q ss_pred CCCCCCCCCccccceeecCCC--CCCccccccCCccCcceeeecCCCeEEEEEeccCCCCCC---hHHHHHHHHHHh
Q 002031 878 YGDLALPNGRFGLGFKRYNTR--DGSYIGFGHSGMGGSTGFCDVNNRFAIAVTLNKMSFGAT---TGRIIHFVCSEL 949 (977)
Q Consensus 878 ~~~~~~~~~~yGlG~~~~~~~--~~~~~~~gH~G~~G~~~~~~P~~~~~ivvl~N~~~~~~~---~~~~~~~v~~~l 949 (977)
.....||+||++.... .++...|||+|++|+++|+||+++++|++++|+..++.. ...+.++|++++
T Consensus 296 -----~~~~~~GlG~~~~~~~~~~~~~~~~GH~G~~Gt~~~idP~~~l~v~~ltN~~~p~~~~~r~~~L~~av~~~l 367 (372)
T 3zyt_A 296 -----GETGCFGTVFMKSHTRMPFGSYRAFGHDGASASLGFADPVYELGFGYVPQTAEPGGVGCRNFQLSSAVREVI 367 (372)
T ss_dssp -----SSEEEESSSSEECBTTBCSSCTTCEEEECTTSCEEEEEGGGTEEEEEEESBCCCCSTTSHHHHHHHHHHHHH
T ss_pred -----CCCCceeeeeccCCCCCCCCCCCeEEECChhhEEEEEEeCCCEEEEEEeCCCCCCCccHHHHHHHHHHHHHH
Confidence 1235799999886522 345667999999999999999999999999999876544 345677788777
|
| >2drw_A DAA, D-amino acid amidase; penicillin recognizing protein, D-stereospecific, hydrophobic, hydrolase; 2.10A {Ochrobactrum anthropi} SCOP: e.3.1.1 PDB: 2dns_A 2efu_A* 2efx_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.1e-48 Score=443.29 Aligned_cols=342 Identities=19% Similarity=0.194 Sum_probs=248.3
Q ss_pred hHHHHHHHHHHHhccCCCccceEEEEEecCeeEEEeeccccCCCCCCCCCCCCcceeecchHHHHHHHHHHHHHCCCcCc
Q 002031 477 DVEAKLRDFLVELGNDGKILGIQVCAYKDGEVIIDTSAGMLGRYDPRPVQPDSLFPVFSVTKGITAGMLHWLVDNGKLKL 556 (977)
Q Consensus 477 ~~~~~l~~~l~~~~~~~~~pG~svaVv~~g~~v~~~~~G~~~~~~~~~~t~~T~f~i~SiTK~~ta~~v~~lv~~G~l~l 556 (977)
++.+.+++.+++.+++ .+||++++|+++|+++++.++|+++...+.|++++|+|+|||+||+|||+++++|+|+|+|+|
T Consensus 3 ~l~~~l~~~l~~~~~~-~~pG~~v~V~~~g~~v~~~~~G~ad~~~~~p~~~dt~f~iaS~TK~~Ta~~i~~Lve~G~L~L 81 (363)
T 2drw_A 3 DLNNAIQGILDDHVAR-GVVGVSLALCLPGEETSLYQSGYADKFNKMPMTGDHLFRIASCTKSFIATGLHLLVQDGTVDL 81 (363)
T ss_dssp HHHHHHHHHHHHHHTT-TCCEEEEEEECTTSCEEEEEEEEEETTTTEECCTTCBEECGGGHHHHHHHHHHHHHHTTSCCT
T ss_pred hHHHHHHHHHHHHHHc-CCCeEEEEEEECCcEEEEEeEEeccccCCCCCCCCCeeechhhhHHHHHHHHHHHHHCCCCCC
Confidence 4567888888888886 699999999989999999999999999999999999999999999999999999999999999
Q ss_pred CCchhhhccccccCCCCCCcHHHHhcCcCCCCCCcCCCCCCCCcCCCCHHHHHHHHHccCCCCCCCCceecccCcHHHHH
Q 002031 557 EENIANIWPEFKSNGKDLIKVHHVLNHTSGLHNVSVDLSSENPLLICDWDECLNRIALSAPETEPGQEQLYHYLSFGWLC 636 (977)
Q Consensus 557 d~~v~~ylP~~~~~~~~~iTir~LLsHtSGl~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~pG~~~~Ysn~~~~~ll 636 (977)
|+||.+|||+| ..+++|||||||+|||||+++. .+....+....+.+++++.+...++.++||++|.|||.||. ||
T Consensus 82 dd~v~~ylP~~--~~~~~ITir~LLtHtSGl~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~PG~~~~Ysn~~y~-lL 157 (363)
T 2drw_A 82 DEPITRWFPDL--PKAAQMPVRILLNHRSGLPDFE-TSMPMISDKSWTAQEIVDFSFRHGVQKEPWHGMEYSNTGYV-LA 157 (363)
T ss_dssp TSBGGGTCTTS--TTGGGCBGGGGTTTCSCCCCCT-TTSBSSCCCCCCHHHHHHHHHHHSCCCCTTSSCCCCSHHHH-HH
T ss_pred CCcHHHhCcCC--CCCCCCcHHHHhhcccCCCCCc-cccccccccCCCHHHHHHHHHhCCCCCCCCCceEEchhhHH-HH
Confidence 99999999999 4457899999999999999862 22211233456889999999999999999999999999998 99
Q ss_pred HHHHHHHhCCCHHHHHHHHcccccCCCCccCCCCCCCcccCcceecccCCc---cccccCCCCCCCCCCCCCCCcchhhh
Q 002031 637 GGIIERASGKKFQEILEEGIIQPLSIDGELYIGIPPGVESRLASLTIDTDD---LNKVSGINNRPDLRLPSSFQPDKISQ 713 (977)
Q Consensus 637 g~iiE~vtG~~~~~~l~~~if~PLGm~~t~~~~~~~~~~~~~a~~~~~~~~---~~~~~~~~~~p~~~~p~~~~~~~~~~ 713 (977)
|.|||++||++|++|++++||+||||++|.|... ...+.+..|..... ......+..++...
T Consensus 158 g~iie~vtG~~~~~~~~~~I~~PLGm~~t~~~~~---~~~~~~~~y~~~~~~~~~~~~~~~~~~~~g~------------ 222 (363)
T 2drw_A 158 GMIIAHETGKPYSDHLRSRIFAPLGMKDTWVGTH---ETFPIEREARGYMHAAADDENPQWDVSGAGD------------ 222 (363)
T ss_dssp HHHHHHHHTSCHHHHHHHHTHHHHTCCSCEETTT---CCCCGGGBCCCEEECBTTCCSCSSBCTTCCC------------
T ss_pred HHHHHHHHCCCHHHHHHHhhhhhcCCCcccCCcc---cCcchhccccccccccccccccccccCCCCc------------
Confidence 9999999999999999999999999999976421 22233333321000 00000000000000
Q ss_pred hhhcccc-cccchhcc-ccccCccceecCHHHHHHHHHHHHcCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccccchh
Q 002031 714 LAAITPA-VFNMLNIR-RAIIPAANGHCSARALARYYAALADGGVVPPPHSRLSKPPLGSHPHIPKFPSHETSKKQKGTK 791 (977)
Q Consensus 714 ~~~~~~~-~~~~~~~~-~~~~~agG~~sTa~Dlar~~~~ll~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 791 (977)
.... ..+...+. ....++||++||++||+||+++++++..++
T Consensus 223 ---~~~~~~~~~~~~~~~~~~~aggl~sT~~Dl~~~~~~ll~g~lls--------------------------------- 266 (363)
T 2drw_A 223 ---PVDGVWDSTEWFPLSGANAAGDMVSTPRDIVKFLNALFDGRILD--------------------------------- 266 (363)
T ss_dssp ---CBTTEEECTTTSCHHHHGGGTCEEECHHHHHHHHHHHHTTSSSC---------------------------------
T ss_pred ---ccccccccccccCCCCCCCccceEeCHHHHHHHHHHHhcCCCCC---------------------------------
Confidence 0000 00011111 124589999999999999999999865443
Q ss_pred HHHHHHHhhccCCCCCCcccccCCCCCccccccCcchhhhhhhcccCCCCCCCccCCCCCCCCCCcccccccCCCccccc
Q 002031 792 KELLAALKNKTNNSEHGHKYTKDLEGGSHIRTASGDTYARLINIETSSSNTSTTDSISNTDEPQSSNVRKIFNNPRIHDA 871 (977)
Q Consensus 792 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 871 (977)
++++++|.. +. +.. ..|
T Consensus 267 ~~~~~~m~~----------------------------------~~-------------------~~~-----~~~----- 283 (363)
T 2drw_A 267 QKRLWEMKD----------------------------------NI-------------------KPA-----FFP----- 283 (363)
T ss_dssp HHHHHHHHT----------------------------------SC-------------------EEC-----CCT-----
T ss_pred HHHHHHHhC----------------------------------cC-------------------CCc-----CCC-----
Confidence 346777731 00 000 000
Q ss_pred ccCCCCCCCCCCCCCccccceeecCCCCCCccccccCC-ccC--cceeeecCCCeEEEEEeccCCCCC------ChHHHH
Q 002031 872 FLGVGDYGDLALPNGRFGLGFKRYNTRDGSYIGFGHSG-MGG--STGFCDVNNRFAIAVTLNKMSFGA------TTGRII 942 (977)
Q Consensus 872 ~~~~g~~~~~~~~~~~yGlG~~~~~~~~~~~~~~gH~G-~~G--~~~~~~P~~~~~ivvl~N~~~~~~------~~~~~~ 942 (977)
| .....||+||++..... + ..++|+| .+| +..+++|+.+++||+++|+..... ++..+.
T Consensus 284 ----g------~~~~~yGlG~~~~~~~~-g-~~~~H~G~~~G~~s~~~~~P~~~~~vvvl~N~~~~~~~~~~~~~~~~~~ 351 (363)
T 2drw_A 284 ----G------SNTVANGHGLLLMRYGS-S-ELKGHLGQIPGHTSIMGRDEETGAALMLIQNSGAGDFESFYLKGVNEPV 351 (363)
T ss_dssp ----T------SCEEEECSSCEEEEETT-E-EEEEEEEEETTEEEEEEECTTTCCEEEEEESEECSSTTSHHHHTTHHHH
T ss_pred ----C------CCcCCceeEEEEEEcCC-c-eEEEeCCCCCCceEEEEEeeCCCeEEEEEECCCCCCHHHHHHhhcchHH
Confidence 0 01137999999865322 2 5799999 454 445999999999999999976555 244445
Q ss_pred HHHHHHh
Q 002031 943 HFVCSEL 949 (977)
Q Consensus 943 ~~v~~~l 949 (977)
..+++++
T Consensus 352 ~~~~~~~ 358 (363)
T 2drw_A 352 DRVLEAI 358 (363)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 5554444
|
| >3rju_A Beta-lactamase/D-alanine carboxypeptidase; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta sandwich; HET: MSE CIT; 1.50A {Yersinia pestis} PDB: 3ozh_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=8.7e-48 Score=436.45 Aligned_cols=245 Identities=19% Similarity=0.241 Sum_probs=204.4
Q ss_pred chHHHHHHHHHHHhccCCCccceEEEEEecCeeEEEeeccccCCCCCCCCCCCCcceeecchHHHHHHHHHHHHHCCCcC
Q 002031 476 SDVEAKLRDFLVELGNDGKILGIQVCAYKDGEVIIDTSAGMLGRYDPRPVQPDSLFPVFSVTKGITAGMLHWLVDNGKLK 555 (977)
Q Consensus 476 ~~~~~~l~~~l~~~~~~~~~pG~svaVv~~g~~v~~~~~G~~~~~~~~~~t~~T~f~i~SiTK~~ta~~v~~lv~~G~l~ 555 (977)
..+.+.+++.+++++++..+||++++|+++|++++ .+||+++...+.|++++|+|+|||+||+|||+++++|+|+|+|+
T Consensus 4 ~~~~~~ld~~i~~~~~~~~~~G~~~~v~~~g~~~~-~~~G~~~~~~~~~~~~~t~f~i~S~tK~~ta~~i~~lv~~G~l~ 82 (351)
T 3rju_A 4 LLTSQIVDQYAEHIFYNSGAVGMALVVIDNNQVVN-RSFGETQPGNNIRPRPDSLIRIASITKLMTSEIMVKLADDGIVK 82 (351)
T ss_dssp TTHHHHHHHHHHHHHHHTTCSEEEEEEEETTEEEE-EEEECSSTTCCCCCCTTCBEECGGGHHHHHHHHHHHHHHTTSCC
T ss_pred HHHHHHHHHHHHHHHhcCCCCeEEEEEEECCEEEE-EEEEeccCCCCCCCCCCCEEEehhhHHHHHHHHHHHHHHcCCCC
Confidence 35678899999999999999999999999999998 69999999999999999999999999999999999999999999
Q ss_pred cCCchhhhccccccC----CCCCCcHHHHhcCcCCCCCCcCCCCCCCCc-CCCCHHHHHHHHHccCCCCCCCCceecccC
Q 002031 556 LEENIANIWPEFKSN----GKDLIKVHHVLNHTSGLHNVSVDLSSENPL-LICDWDECLNRIALSAPETEPGQEQLYHYL 630 (977)
Q Consensus 556 ld~~v~~ylP~~~~~----~~~~iTir~LLsHtSGl~~~~~~~~~~~~~-~~~~~~~~~~~l~~~~~~~~pG~~~~Ysn~ 630 (977)
||+||.+|||++... ++++|||||||+|||||+.+........+. ...+.+++++.+...++.++||+.|.|||.
T Consensus 83 ld~~v~~ylP~~~~~~~~~~~~~iTir~LL~htSGl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pG~~~~Ysn~ 162 (351)
T 3rju_A 83 LTDPLKKYAPKGVNVPSYSAKQPIRLLHLASHTSGLPREQPGGPQKRPVFTWPTKDNRWQWLKLAKVTVPPGVKAAYSNL 162 (351)
T ss_dssp TTCBGGGGCCTTCCCCCSSTTCCCBHHHHHHTCSCCCSSCSSCCSSCCTTCSSCHHHHHHHHTTCCCCSCTTSEEECCSH
T ss_pred CCCcHHHhCcccccCCCCCCCCCCcHHHHHhCcCCCCCCCCCccccCcccccCCHHHHHHHHHhCCCCCCCCCceeecHH
Confidence 999999999997542 347899999999999999865433222221 123778999999999999999999999999
Q ss_pred cHHHHHHHHHHHHhCCCHHHHHHHHcccccCCCCccCCCCCCCcccCcceecccCCccccccCCCCCCCCCCCCCCCcch
Q 002031 631 SFGWLCGGIIERASGKKFQEILEEGIIQPLSIDGELYIGIPPGVESRLASLTIDTDDLNKVSGINNRPDLRLPSSFQPDK 710 (977)
Q Consensus 631 ~~~~llg~iiE~vtG~~~~~~l~~~if~PLGm~~t~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~p~~~~p~~~~~~~ 710 (977)
||. |||.|||++||++|++|++++||+||||++|.|. .++....+.+.++. ..|.
T Consensus 163 ~~~-llg~iie~vtg~~~~~~~~~~i~~PLgm~~t~~~-~~~~~~~~~~~g~~------------~~~~----------- 217 (351)
T 3rju_A 163 AYD-LLADALSRAAGKPYAHLLRDKITAPLGMKNTTLT-PTAEQCKRLMIGVG------------SSRC----------- 217 (351)
T ss_dssp HHH-HHHHHHHHHHTSCHHHHHHHHTHHHHTCTTCBSS-CCHHHHTTBCCCTT------------CCCC-----------
T ss_pred HHH-HHHHHHHHHHCCCHHHHHHHhcccccCCCCCccC-CChhhhhhcccCcC------------CCCC-----------
Confidence 999 9999999999999999999999999999999764 23333333333330 0000
Q ss_pred hhhhhhcccccccchhccccccCccceecCHHHHHHHHHHHHcCCCCCCCC
Q 002031 711 ISQLAAITPAVFNMLNIRRAIIPAANGHCSARALARYYAALADGGVVPPPH 761 (977)
Q Consensus 711 ~~~~~~~~~~~~~~~~~~~~~~~agG~~sTa~Dlar~~~~ll~~g~~~~~~ 761 (977)
.......++||+++|++||+||+++++++|.+.+++
T Consensus 218 ---------------~~~~~~~g~ggl~st~~Dl~~~~~~~l~~g~~~~~~ 253 (351)
T 3rju_A 218 ---------------GNTVAAAGSGGIYSTPEDMQHWMQQFLASDNSAPKR 253 (351)
T ss_dssp ---------------CCCGGGTTTTCCEECHHHHHHHHHTTSCCSSCCCCT
T ss_pred ---------------ccccccCCcceeEECHHHHHHHHHHHhCCCCCcchh
Confidence 001244689999999999999999999999988764
|
| >1yqs_A D-alanyl-D-alanine carboxypeptidase; cell well biosynthesis, beta-lactam, beta-sultam, sulfonylation, hydrolase; HET: BSA; 1.05A {Streptomyces SP} SCOP: e.3.1.1 PDB: 1cef_A* 1ceg_A* 1ikg_A* 1iki_A* 1hvb_A* 1pw1_A* 1pw8_A* 1mpl_A* 1pwd_A* 1pwc_A* 1scw_A* 1pwg_A* 3pte_A 1sde_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-47 Score=434.58 Aligned_cols=324 Identities=21% Similarity=0.313 Sum_probs=242.0
Q ss_pred HHHHHHHHHhccCCCccceEEEEEecCeeEEEeeccccCCCCCCCCCCCCcceeecchHHHHHHHHHHHHHCCCcCcCCc
Q 002031 480 AKLRDFLVELGNDGKILGIQVCAYKDGEVIIDTSAGMLGRYDPRPVQPDSLFPVFSVTKGITAGMLHWLVDNGKLKLEEN 559 (977)
Q Consensus 480 ~~l~~~l~~~~~~~~~pG~svaVv~~g~~v~~~~~G~~~~~~~~~~t~~T~f~i~SiTK~~ta~~v~~lv~~G~l~ld~~ 559 (977)
+++++.+++.+++ .+||++++| ++|+++++.++|+++...+.|++++|+|+|||+||+|||+++++|+|+|+|+||+|
T Consensus 9 ~~l~~~l~~~~~~-~~pG~~v~v-~~g~~v~~~~~G~a~~~~~~p~~~dt~f~iaSvTK~~Ta~~i~~Lve~G~l~ldd~ 86 (349)
T 1yqs_A 9 TGLQAVLHTALSQ-GAPGAMVRV-DDNGTIHQLSEGVADRATGRAITTTDRFRVGSVTKSFSAVVLLQLVDEGKLDLDAS 86 (349)
T ss_dssp HHHHHHHHHHHHT-TCSEEEEEE-EETTEEEEEEEEBSCTTTCCBCCTTCBEECGGGHHHHHHHHHHHHHHTTSCCTTSB
T ss_pred HHHHHHHHHHHhC-CCCeEEEEE-EcCCEEEEEeEEEeecccCCCCCCCCeEecccchHHHHHHHHHHHHHCCCCCCCCc
Confidence 4567777777776 599999988 78889999999999999999999999999999999999999999999999999999
Q ss_pred hhhhccccccCCCCCCcHHHHhcCcCCCCCCcCCCCCC-------CCcCCCCHHHHHHHHHccCCCCCCCCceecccCcH
Q 002031 560 IANIWPEFKSNGKDLIKVHHVLNHTSGLHNVSVDLSSE-------NPLLICDWDECLNRIALSAPETEPGQEQLYHYLSF 632 (977)
Q Consensus 560 v~~ylP~~~~~~~~~iTir~LLsHtSGl~~~~~~~~~~-------~~~~~~~~~~~~~~l~~~~~~~~pG~~~~Ysn~~~ 632 (977)
|.+|||+|.. .++|||||||+|||||+++....... .+...++.+++++.+...++.++||++|.|||.||
T Consensus 87 v~~ylP~~~~--~~~ITir~LL~HtSGl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~PG~~~~Ysn~~y 164 (349)
T 1yqs_A 87 VNTYLPGLLP--DDRITVRQVMSHRSGLYDYTNDMFAQTVPGFESVRNKVFSYQDLITLSLKHGVTNAPGAAYSYSNTNF 164 (349)
T ss_dssp HHHHSTTCSS--CTTCBHHHHHTTCSCCCCTHHHHTSSHHHHHHHHTTCCCCHHHHHHHHHTSCCSSSTTSCCCCCHHHH
T ss_pred HHHhccCcCC--CCCccHHHHhhCcCCCCcccchhhhhccchhhcCccccCCHHHHHHHHhcCCCccCCCCCeEEccHhH
Confidence 9999999976 57899999999999999761110000 11235678999999999999999999999999999
Q ss_pred HHHHHHHHHHHhCCCHHHHHHHHcccccCCCCccCCCCCCCcccCcceecccCC-ccccccCCCCCCCCCCCCCCCcchh
Q 002031 633 GWLCGGIIERASGKKFQEILEEGIIQPLSIDGELYIGIPPGVESRLASLTIDTD-DLNKVSGINNRPDLRLPSSFQPDKI 711 (977)
Q Consensus 633 ~~llg~iiE~vtG~~~~~~l~~~if~PLGm~~t~~~~~~~~~~~~~a~~~~~~~-~~~~~~~~~~~p~~~~p~~~~~~~~ 711 (977)
. |||.|||++||++|++|++++||+||||++|.|....+....+.+.+|.... .+.... +
T Consensus 165 ~-lLg~iie~vtG~~~~~~~~~~i~~PLGm~~t~~~~~~~~~~~~~~~gy~~~~~~g~~~~----~-------------- 225 (349)
T 1yqs_A 165 V-VAGMLIEKLTGHSVATEYQNRIFTPLNLTDTFYVHPDTVIPGTHANGYLTPDEAGGALV----D-------------- 225 (349)
T ss_dssp H-HHHHHHHHHHSSCHHHHHHHHTTTTTTCTTCBCCTTCCCCCSSBCCCEECCSSTTCCCE----E--------------
T ss_pred H-HHHHHHHHHhCCCHHHHHHHhcccccCCCCcccCCcccccccccccceeccCCCCCccc----c--------------
Confidence 8 9999999999999999999999999999999764322233334444442110 000000 0
Q ss_pred hhhhhcccccccchhccccccCccceecCHHHHHHHHHHHHcCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccccchh
Q 002031 712 SQLAAITPAVFNMLNIRRAIIPAANGHCSARALARYYAALADGGVVPPPHSRLSKPPLGSHPHIPKFPSHETSKKQKGTK 791 (977)
Q Consensus 712 ~~~~~~~~~~~~~~~~~~~~~~agG~~sTa~Dlar~~~~ll~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 791 (977)
.....+. ...++||++||++||+||+++++++..++
T Consensus 226 --------~~~~~~~---~~~~aggl~sT~~Dl~~~~~~ll~g~lls--------------------------------- 261 (349)
T 1yqs_A 226 --------STEQTVS---WAQSAGAVISSTQDLDTFFSALMSGQLMS--------------------------------- 261 (349)
T ss_dssp --------CCCCCCT---TTGGGTCCEECHHHHHHHHHHHHTTCSSC---------------------------------
T ss_pred --------ccccCcc---cccCCcCcEeCHHHHHHHHHHHhcCCCCC---------------------------------
Confidence 0000111 12478999999999999999999875443
Q ss_pred HHHHHHHhhccCCCCCCcccccCCCCCccccccCcchhhhhhhcccCCCCCCCccCCCCCCCCCCcccccccCCCccccc
Q 002031 792 KELLAALKNKTNNSEHGHKYTKDLEGGSHIRTASGDTYARLINIETSSSNTSTTDSISNTDEPQSSNVRKIFNNPRIHDA 871 (977)
Q Consensus 792 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 871 (977)
++.+++|.. +. +. +
T Consensus 262 ~~~~~~m~~----------------------------------~~-------------------~~-------~------ 275 (349)
T 1yqs_A 262 AAQLAQMQQ----------------------------------WT-------------------TV-------N------ 275 (349)
T ss_dssp HHHHHHHTC----------------------------------CE-------------------EE-------E------
T ss_pred HHHHHHHhh----------------------------------cc-------------------CC-------C------
Confidence 346666620 00 00 0
Q ss_pred ccCCCCCCCCCCCCCccccceeecCCCCCCccccccCC-ccC--cceeeecCCCeEEEEEeccCCCCCChHHHHHHHHHH
Q 002031 872 FLGVGDYGDLALPNGRFGLGFKRYNTRDGSYIGFGHSG-MGG--STGFCDVNNRFAIAVTLNKMSFGATTGRIIHFVCSE 948 (977)
Q Consensus 872 ~~~~g~~~~~~~~~~~yGlG~~~~~~~~~~~~~~gH~G-~~G--~~~~~~P~~~~~ivvl~N~~~~~~~~~~~~~~v~~~ 948 (977)
+...||+||++.... .+...++|+| ..| +..+++|+.+++||+++|..........+.+++.+.
T Consensus 276 ------------~~~~yGlG~~~~~~~-~g~~~~~H~G~~~G~~s~~~~~p~~~~~vvvl~N~~~~~~~~~~~~~~~~~~ 342 (349)
T 1yqs_A 276 ------------STQGYGLGLRRRDLS-CGISVYGHTGTVQGYYTYAFASKDGKRSVTALANTSNNVNVLNTMARTLESA 342 (349)
T ss_dssp ------------TTEEECSSCEEEECT-TSCEEEEEEEEETTEEEEEEECTTSSEEEEEEESEESCHHHHHHHHHHHHHH
T ss_pred ------------CCCCceeeEEeeccC-CCceEEEECCccCCeeEEEEEecCCCEEEEEEEcCCCCcccchHHHHHHHHH
Confidence 013799999986532 2345799999 545 445999999999999999876543223344455554
Q ss_pred h
Q 002031 949 L 949 (977)
Q Consensus 949 l 949 (977)
+
T Consensus 343 ~ 343 (349)
T 1yqs_A 343 F 343 (349)
T ss_dssp H
T ss_pred h
Confidence 4
|
| >2qz6_A Beta-lactamase; psychrophIle, cold adaptation, antibiotic resistance, hydrolase, periplasm; 2.26A {Pseudomonas fluorescens} | Back alignment and structure |
|---|
Probab=100.00 E-value=6.2e-48 Score=438.32 Aligned_cols=238 Identities=21% Similarity=0.288 Sum_probs=199.3
Q ss_pred hHHHHHHHHHHHhccCCCccceEEEEEecCeeEEEeeccccCCCCCCCCCCCCcceeecchHHHHHHHHHHHHHCCCcCc
Q 002031 477 DVEAKLRDFLVELGNDGKILGIQVCAYKDGEVIIDTSAGMLGRYDPRPVQPDSLFPVFSVTKGITAGMLHWLVDNGKLKL 556 (977)
Q Consensus 477 ~~~~~l~~~l~~~~~~~~~pG~svaVv~~g~~v~~~~~G~~~~~~~~~~t~~T~f~i~SiTK~~ta~~v~~lv~~G~l~l 556 (977)
++.+.+++.+++.++++.+||++++|+++|++++. +||+++...+.|++++|+|+|||+||+|||+++++|+|+|+|+|
T Consensus 3 ~~~~~l~~~~~~~~~~~~~pG~~v~v~~~g~~~~~-~~G~~~~~~~~~~~~~t~f~iaS~tK~~ta~~i~~Lve~G~l~L 81 (358)
T 2qz6_A 3 DIRQVVDSTVEPLMQQQDIAGLSVAVIQNGKAQYF-NYGVANKDSKQPITENTLFEIGSVSKTFTATLAGYALANGKLKL 81 (358)
T ss_dssp CHHHHHHHHHHHHHHHTTCSEEEEEEEETTEEEEE-EEEBSCTTTCCBCCTTCBEECGGGHHHHHHHHHHHHHHTTSCCT
T ss_pred hHHHHHHHHHHHHHHhCCCCeEEEEEEECCEEEEE-EEEeeccCCCCCCCCCCEEechhhHHHHHHHHHHHHHHcCCCCC
Confidence 56788999999999999999999999999999885 89999999999999999999999999999999999999999999
Q ss_pred CCchhhhccccccCCCCCCcHHHHhcCcCC-CCCCcCCCCCCCCcCCCCHHHHHHHHHccCCCCCCCCceecccCcHHHH
Q 002031 557 EENIANIWPEFKSNGKDLIKVHHVLNHTSG-LHNVSVDLSSENPLLICDWDECLNRIALSAPETEPGQEQLYHYLSFGWL 635 (977)
Q Consensus 557 d~~v~~ylP~~~~~~~~~iTir~LLsHtSG-l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~pG~~~~Ysn~~~~~l 635 (977)
||||.+|||+|....++.|||||||+|||| ++.+.+. ...+.+++++.+...++.++||+.|.|||.||. |
T Consensus 82 ddpv~~ylP~~~~~~~~~iTir~LL~HtSG~l~~~~~~-------~~~~~~~~~~~~~~~~~~~~PG~~~~Ysn~~~~-l 153 (358)
T 2qz6_A 82 SDPASQYLPALRGDKFDHISLLNLGTYTAGGLPLQFPE-------ESDNTGKMISYYQHWKPAFAPGTQRLYSNPSIG-L 153 (358)
T ss_dssp TSBGGGGCGGGTTSGGGSSBHHHHHTTCSSCCCSSCC------------CHHHHHHHHHCCCSSCTTTEECCCHHHHH-H
T ss_pred CCcHHHhCccccCCCCCCccHHHHhhCcCCCCCccCcc-------ccCCHHHHHHHHHhCCCCCCCCCceeeCHHHHH-H
Confidence 999999999998766678999999999999 9875321 234567899999999999999999999999999 9
Q ss_pred HHHHHHHHhCCCHHHHHHHHcccccCCCCccCCCCCCCcccCcceecccCCccccccCCCCCCCCCCCCCCCcchhhhhh
Q 002031 636 CGGIIERASGKKFQEILEEGIIQPLSIDGELYIGIPPGVESRLASLTIDTDDLNKVSGINNRPDLRLPSSFQPDKISQLA 715 (977)
Q Consensus 636 lg~iiE~vtG~~~~~~l~~~if~PLGm~~t~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~p~~~~p~~~~~~~~~~~~ 715 (977)
||.|||++||++|++|++++||+||||++|.|. .+.....+.+.+|..... ... ..|
T Consensus 154 Lg~iie~vtg~~~~~~~~~~i~~PLgm~~t~~~-~~~~~~~~~a~gy~~~~~--~~~---~~~----------------- 210 (358)
T 2qz6_A 154 FGHLAAQSLGQPFEKLMEQTVLPKLGLKHTFIS-VPETQMSLYAQGYDKAGK--PVR---VSP----------------- 210 (358)
T ss_dssp HHHHHHHTTTSCHHHHHHHTTTGGGTCSSEESS-CCGGGGGGBCCCBCTTSC--BCC---CCC-----------------
T ss_pred HHHHHHHHhCCCHHHHHHHhcccccCCcccccC-CCchhccceeeeeccCCc--eec---cCC-----------------
Confidence 999999999999999999999999999998663 344444555655533211 000 000
Q ss_pred hcccccccchhccccccCccceecCHHHHHHHHHHHHcCCCCC
Q 002031 716 AITPAVFNMLNIRRAIIPAANGHCSARALARYYAALADGGVVP 758 (977)
Q Consensus 716 ~~~~~~~~~~~~~~~~~~agG~~sTa~Dlar~~~~ll~~g~~~ 758 (977)
.+ ...++||++||++||+||++++++++.++
T Consensus 211 ----------~~--~~~~aggl~sT~~Dl~~~~~~ll~~~~l~ 241 (358)
T 2qz6_A 211 ----------GA--LDAEAYGIKTSTSDLIHYVEVNMHPAKLE 241 (358)
T ss_dssp ----------CT--THHHHTCCEECHHHHHHHHHHHHCGGGSC
T ss_pred ----------Cc--ccCCcceEEEcHHHHHHHHHHHhCCCCCC
Confidence 00 11257899999999999999999987664
|
| >1zkj_A CMY-10, extended-spectrum beta-lactamase; plasmid, class C, hydrolase; 1.55A {Enterobacter aerogenes} | Back alignment and structure |
|---|
Probab=100.00 E-value=8.9e-48 Score=437.20 Aligned_cols=237 Identities=20% Similarity=0.241 Sum_probs=202.7
Q ss_pred chHHHHHHHHHHHhccCCCccceEEEEEecCeeEEEeeccccCCCCCCCCCCCCcceeecchHHHHHHHHHHHHHCCCcC
Q 002031 476 SDVEAKLRDFLVELGNDGKILGIQVCAYKDGEVIIDTSAGMLGRYDPRPVQPDSLFPVFSVTKGITAGMLHWLVDNGKLK 555 (977)
Q Consensus 476 ~~~~~~l~~~l~~~~~~~~~pG~svaVv~~g~~v~~~~~G~~~~~~~~~~t~~T~f~i~SiTK~~ta~~v~~lv~~G~l~ 555 (977)
..+.+.+++.+++.++++.+||++++|+++|++++. +||+++...+.|++++|+|+|||+||+|||+++++|+|+|+|+
T Consensus 7 ~~~~~~l~~~~~~~~~~~~~~G~~v~V~~~g~~~~~-~~G~~~~~~~~~~~~~t~f~iaS~tK~~Ta~~i~~Lve~G~l~ 85 (359)
T 1zkj_A 7 DPLRPVVDASIQPLLKEHRIPGMAVAVLKDGKAHYF-NYGVANRESGAGVSEQTLFEIGSVSKTLTATLGAYAVVKGAMQ 85 (359)
T ss_dssp CTTHHHHHHHHHHHHHHTTCSEEEEEEEETTEEEEE-EEEBSCTTTCCBCCTTCBEECGGGHHHHHHHHHHHHHHTTSCC
T ss_pred HHHHHHHHHHHHHHHHcCCCCeEEEEEEECCEEEEE-EEEecccccCCCCCCCCeEechhhHHHHHHHHHHHHHHcCCCC
Confidence 467788999999999999999999999999999986 8999999999999999999999999999999999999999999
Q ss_pred cCCchhhhccccccCCCCCCcHHHHhcCcCC-CCCCcCCCCCCCCcCCCCHHHHHHHHHccCCCCCCCCceecccCcHHH
Q 002031 556 LEENIANIWPEFKSNGKDLIKVHHVLNHTSG-LHNVSVDLSSENPLLICDWDECLNRIALSAPETEPGQEQLYHYLSFGW 634 (977)
Q Consensus 556 ld~~v~~ylP~~~~~~~~~iTir~LLsHtSG-l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~pG~~~~Ysn~~~~~ 634 (977)
|||||.+|||+|....++.|||||||+|||| |+.+.+. ...+.+++++.+...++.++||++|.|||.||.
T Consensus 86 Ldd~v~~ylP~~~~~~~~~iTir~LL~HtSG~l~~~~~~-------~~~~~~~~~~~~~~~~~~~~PG~~~~Ysn~~y~- 157 (359)
T 1zkj_A 86 LDDKASRHAPWLKGSAFDSITMGELATYSAGGLPLQFPE-------EVDSSEKMRAYYRQWAPVYSPGSHRQYSNPSIG- 157 (359)
T ss_dssp TTSBGGGGCGGGTTSGGGSSBHHHHHTTCSSCCCSSCCT-------TCCSHHHHHHHHHHCCCSSCTTTEECCCHHHHH-
T ss_pred CCCcHHHhCcccccCCCCCcCHHHHhcCcCCCCCccCcc-------ccCCHHHHHHHHHhCCCCCCCCCceeecHHHHH-
Confidence 9999999999998766678999999999999 9975331 245788999999999999999999999999999
Q ss_pred HHHHHHHHHhCCCHHHHHHHHcccccCCCCccCCCCCCCcccCcceecccCCccccccCCCCCCCCCCCCCCCcchhhhh
Q 002031 635 LCGGIIERASGKKFQEILEEGIIQPLSIDGELYIGIPPGVESRLASLTIDTDDLNKVSGINNRPDLRLPSSFQPDKISQL 714 (977)
Q Consensus 635 llg~iiE~vtG~~~~~~l~~~if~PLGm~~t~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~p~~~~p~~~~~~~~~~~ 714 (977)
|||.|||++||++|++|++++||+||||++|.|. .+.....+.+.+|..... ... ..|
T Consensus 158 lLg~iie~vtg~~~~~~~~~~i~~PLgm~~t~~~-~~~~~~~~~a~gy~~~~~--~~~---~~~---------------- 215 (359)
T 1zkj_A 158 LFGHLAASSLKQPFAPLMEQTLLPGLGMHHTYVN-VPKQAMASYAYGYSKEDK--PIR---VNP---------------- 215 (359)
T ss_dssp HHHHHHHHHTTSCHHHHHHHTHHHHTTCSSCBSS-CCGGGGGGBCCEECTTCC--EEC---CCC----------------
T ss_pred HHHHHHHHHhCCCHHHHHHHHcccccCCCcCccc-CCcccccCeeeeeccCCc--ccc---cCC----------------
Confidence 9999999999999999999999999999998653 444445566666643221 000 000
Q ss_pred hhcccccccchhccccccCccceecCHHHHHHHHHHHHcCCC
Q 002031 715 AAITPAVFNMLNIRRAIIPAANGHCSARALARYYAALADGGV 756 (977)
Q Consensus 715 ~~~~~~~~~~~~~~~~~~~agG~~sTa~Dlar~~~~ll~~g~ 756 (977)
.+ ...++||++||++||+||++++++++.
T Consensus 216 -----------~~--~~~~aggl~sT~~Dl~~~~~~ll~~~~ 244 (359)
T 1zkj_A 216 -----------GM--LADEAYGIKTSSADLLRFVKANIGGVD 244 (359)
T ss_dssp -----------CT--THHHHHCCEECHHHHHHHHHHTTTCCS
T ss_pred -----------Cc--cCCCCCeeEeCHHHHHHHHHHHhcCCC
Confidence 00 112678999999999999999999876
|
| >2wzx_A Beta-lactamase; inhibitor, hydrolase, antibiotic resistance; HET: ZX0; 1.40A {Pseudomonas aeruginosa} PDB: 2wzz_A* 3s1y_A* 3s22_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-47 Score=437.50 Aligned_cols=240 Identities=22% Similarity=0.292 Sum_probs=201.7
Q ss_pred chHHHHHHHHHHHhccCCCccceEEEEEecCeeEEEeeccccCCCCCCCCCCCCcceeecchHHHHHHHHHHHHHCCCcC
Q 002031 476 SDVEAKLRDFLVELGNDGKILGIQVCAYKDGEVIIDTSAGMLGRYDPRPVQPDSLFPVFSVTKGITAGMLHWLVDNGKLK 555 (977)
Q Consensus 476 ~~~~~~l~~~l~~~~~~~~~pG~svaVv~~g~~v~~~~~G~~~~~~~~~~t~~T~f~i~SiTK~~ta~~v~~lv~~G~l~ 555 (977)
.++.+.+++.+++.++++.+||++++|+++|++++. +||+++...+.|++++|+|+|||+||+|||+++++|+|+|+|+
T Consensus 6 ~~~~~~l~~~i~~~~~~~~~~G~~v~v~~~g~~~~~-~~G~~~~~~~~p~~~~t~f~iaS~tK~~Ta~~i~~Lve~G~l~ 84 (371)
T 2wzx_A 6 DRLKALVDAAVQPVMKANDIPGLAVAISLKGEPHYF-SYGLASKEDGRRVTPETLFEIGSVSKTFTATLAGYALTQDKMR 84 (371)
T ss_dssp HHHHHHHHHHHHHHHHHTTCSEEEEEEEETTEEEEE-EEEBSCTTTCCBCCTTCEEECGGGHHHHHHHHHHHHHHTTSCC
T ss_pred HHHHHHHHHHHHHHHhcCCCCeEEEEEEECCEEEEE-EEeeccccCCCCCCCCCEEeehhhHHHHHHHHHHHHHHcCCCC
Confidence 457788999999999999999999999999999985 8999999999999999999999999999999999999999999
Q ss_pred cCCchhhhccccccCCCCCCcHHHHhcCcCC-CCCCcCCCCCCCCcCCCCHHHHHHHHHccCCCCCCCCceecccCcHHH
Q 002031 556 LEENIANIWPEFKSNGKDLIKVHHVLNHTSG-LHNVSVDLSSENPLLICDWDECLNRIALSAPETEPGQEQLYHYLSFGW 634 (977)
Q Consensus 556 ld~~v~~ylP~~~~~~~~~iTir~LLsHtSG-l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~pG~~~~Ysn~~~~~ 634 (977)
|||||.+|||+|....++.|||||||+|||| |+.+.... ...+.+++++.+...++.++||+.|.|||.||.
T Consensus 85 Ldd~v~~ylP~~~~~~~~~ITir~LL~HtSG~l~~~~~~~------~~~~~~~~~~~~~~~~~~~~PG~~~~Ysn~~~~- 157 (371)
T 2wzx_A 85 LDDRASQHWPALQGSRFDGISLLDLATYTAGGLPLQFPDS------VQKDQAQIRDYYRQWQPTYAPGSQRLYSNPSIG- 157 (371)
T ss_dssp TTSBGGGGCGGGTTSGGGGCBHHHHHTTCSSCCCSSCCTT------CCSCHHHHHHHHHHCCCSSCTTSEECCCHHHHH-
T ss_pred CCCcHHHhCcccccCCCCCccHHHHhcCCCCCCCccCCcc------ccCCHHHHHHHHHhCCCCCCCCCceeecHHHHH-
Confidence 9999999999998766678999999999999 98753321 013788999999999999999999999999999
Q ss_pred HHHHHHHHHhCCCHHHHHHHHcccccCCCCccCCCCCCCcccCcceecccCCccccccCCCCCCCCCCCCCCCcchhhhh
Q 002031 635 LCGGIIERASGKKFQEILEEGIIQPLSIDGELYIGIPPGVESRLASLTIDTDDLNKVSGINNRPDLRLPSSFQPDKISQL 714 (977)
Q Consensus 635 llg~iiE~vtG~~~~~~l~~~if~PLGm~~t~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~p~~~~p~~~~~~~~~~~ 714 (977)
|||.|||++||++|++|++++||+||||++|.|. .+.....+.+.+|..... ... ..|
T Consensus 158 lLg~iie~vtG~~~~~~~~~~i~~PLGm~~t~~~-~~~~~~~~~a~gy~~~~~--~~~---~~~---------------- 215 (371)
T 2wzx_A 158 LFGYLAARSLGQPFERLMEQQVFPALGLEQTHLD-VPEAALAQYAQGYGKDDR--PLR---VGP---------------- 215 (371)
T ss_dssp HHHHHHHHHHTSCHHHHHHHTHHHHTTCSSEESS-CCGGGGGGBCCCBCGGGC--BCC---CCC----------------
T ss_pred HHHHHHHHHhCCCHHHHHHHhccccCCCCccccC-CCccccccccccccCCCC--ccc---cCC----------------
Confidence 9999999999999999999999999999999663 333344555555532211 000 000
Q ss_pred hhcccccccchhccccccCccceecCHHHHHHHHHHHHcCCCCC
Q 002031 715 AAITPAVFNMLNIRRAIIPAANGHCSARALARYYAALADGGVVP 758 (977)
Q Consensus 715 ~~~~~~~~~~~~~~~~~~~agG~~sTa~Dlar~~~~ll~~g~~~ 758 (977)
.+ ...++||++||++||+||++++++++.++
T Consensus 216 -----------~~--~~~~aggl~sT~~Dl~~~~~~ll~~~~l~ 246 (371)
T 2wzx_A 216 -----------GP--LDAEGYGVKTSAADLLRFVDANLHPERLD 246 (371)
T ss_dssp -----------CT--THHHHHCCEEEHHHHHHHHHHHHCGGGSC
T ss_pred -----------cc--ccCCcCeEEECHHHHHHHHHHHhCCCCCC
Confidence 00 11257899999999999999999987664
|
| >2ffy_A Beta-lactamase; AMPC, deacylation, transition state, boronic acid, hydrolase; HET: SM3; 1.07A {Escherichia coli} SCOP: e.3.1.1 PDB: 1pi5_A* 1pi4_A* 2hds_A* 1c3b_A* 1fco_A* 1ga9_A* 1iem_A* 1kds_A* 1kdw_A* 1ke0_A* 1ke3_A* 1iel_A 1kvm_A* 1l2s_A* 1ll5_A* 1ll9_A* 1llb_A* 1mxo_A* 1my8_A* 1xgi_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-47 Score=435.51 Aligned_cols=240 Identities=22% Similarity=0.285 Sum_probs=204.3
Q ss_pred chHHHHHHHHHHHhccCCCccceEEEEEecCeeEEEeeccccCCCCCCCCCCCCcceeecchHHHHHHHHHHHHHCCCcC
Q 002031 476 SDVEAKLRDFLVELGNDGKILGIQVCAYKDGEVIIDTSAGMLGRYDPRPVQPDSLFPVFSVTKGITAGMLHWLVDNGKLK 555 (977)
Q Consensus 476 ~~~~~~l~~~l~~~~~~~~~pG~svaVv~~g~~v~~~~~G~~~~~~~~~~t~~T~f~i~SiTK~~ta~~v~~lv~~G~l~ 555 (977)
.++.+.+++.+++.++++.+||++++|+++|++++. +||+++...+.|++++|+|+|||+||+|||+++++|+|+|+|+
T Consensus 3 ~~~~~~l~~~~~~~~~~~~~~G~~v~v~~~g~~~~~-~~G~~~~~~~~~~~~~t~f~iaS~tK~~Ta~~i~~Lve~G~l~ 81 (358)
T 2ffy_A 3 QQINDIVHRTITPLIEQQKIPGMAVAVIYQGKPYYF-TWGYADIAKKQPVTQQTLFELGSVSKTFTGVLGGDAIARGEIK 81 (358)
T ss_dssp HHHHHHHHHHHHHHHHHHTCSEEEEEEEETTEEEEE-EEEEEETTTTEECCTTCBEECGGGHHHHHHHHHHHHHHTTSCC
T ss_pred hHHHHHHHHHHHHHHhcCCCceEEEEEEECCEEEEE-EEeecccccCCCCCCCCeEEeeeeHHHHHHHHHHHHHHcCCCC
Confidence 457788999999999999999999999999999986 8999999999999999999999999999999999999999999
Q ss_pred cCCchhhhccccccCCCCCCcHHHHhcCcCC-CCCCcCCCCCCCCcCCCCHHHHHHHHHccCCCCCCCCceecccCcHHH
Q 002031 556 LEENIANIWPEFKSNGKDLIKVHHVLNHTSG-LHNVSVDLSSENPLLICDWDECLNRIALSAPETEPGQEQLYHYLSFGW 634 (977)
Q Consensus 556 ld~~v~~ylP~~~~~~~~~iTir~LLsHtSG-l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~pG~~~~Ysn~~~~~ 634 (977)
|||||.+|||+|....+++|||||||+|||| ++.+.+. ...+.+++++.+...++.++||++|.|||.||.
T Consensus 82 Ldd~v~~ylP~~~~~~~~~iTir~LL~HtSG~l~~~~~~-------~~~~~~~~~~~~~~~~~~~~PG~~~~Ysn~~~~- 153 (358)
T 2ffy_A 82 LSDPTTKYWPELTAKQWNGITLLHLATYTAGGLPLQVPD-------EVKSSSDLLRFYQNWQPAWAPGTQRLYANSSIG- 153 (358)
T ss_dssp TTSBHHHHCTTCCSGGGTTCBHHHHHHTCSSCCCSSCCT-------TCCSHHHHHHHHHHCCCSSCTTSEECCCHHHHH-
T ss_pred CCCcHHHhCcccccCCCCCcCHHHHhhCcCCCCCccCcc-------ccCCHHHHHHHHHhCCCCCCCCCceeecHHHHH-
Confidence 9999999999997665678999999999999 9875321 245788999999999999999999999999999
Q ss_pred HHHHHHHHHhCCCHHHHHHHHcccccCCCCccCCCCCCCcccCcceecccCCccccccCCCCCCCCCCCCCCCcchhhhh
Q 002031 635 LCGGIIERASGKKFQEILEEGIIQPLSIDGELYIGIPPGVESRLASLTIDTDDLNKVSGINNRPDLRLPSSFQPDKISQL 714 (977)
Q Consensus 635 llg~iiE~vtG~~~~~~l~~~if~PLGm~~t~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~p~~~~p~~~~~~~~~~~ 714 (977)
|||.|||++||++|++|++++||+||||++|.|. .+.....+.+.+|.. +. ... ..|
T Consensus 154 lLg~iie~vtg~~~~~~~~~~i~~PLgm~~t~~~-~~~~~~~~~a~gy~~-~~--~~~---~~~---------------- 210 (358)
T 2ffy_A 154 LFGALAVKPSGLSFEQAMQTRVFQPLKLNHTWIN-VPPAEEKNYAWGYRE-GK--AVH---VSP---------------- 210 (358)
T ss_dssp HHHHHHTGGGTSCHHHHHHHHTTTTTTCTTCBSS-CCGGGGGGBCCEEET-TE--EEC---CCC----------------
T ss_pred HHHHHHHHHhCCCHHHHHHHhcccccCCCCcccC-CCcccccCeeeeEec-CC--ccc---ccc----------------
Confidence 9999999999999999999999999999998663 344444556666643 11 110 000
Q ss_pred hhcccccccchhccccccCccceecCHHHHHHHHHHHHcCCCCCCC
Q 002031 715 AAITPAVFNMLNIRRAIIPAANGHCSARALARYYAALADGGVVPPP 760 (977)
Q Consensus 715 ~~~~~~~~~~~~~~~~~~~agG~~sTa~Dlar~~~~ll~~g~~~~~ 760 (977)
.+ ...++||++||++||+||++++++++.++++
T Consensus 211 -----------~~--~~~~aggl~sT~~Dl~~~~~~ll~~~~~~~~ 243 (358)
T 2ffy_A 211 -----------GA--LDAEAYGVKSTIEDMARWVQSNLKPLDINEK 243 (358)
T ss_dssp -----------CT--THHHHTCCEECHHHHHHHHHHHHCGGGCSSH
T ss_pred -----------cc--ccCCCceEEECHHHHHHHHHHHhCCCCCChH
Confidence 00 1136899999999999999999999887654
|
| >2qmi_A PBP related beta-lactamase; PAB87, octamer, LU-HPDO3A, archaea, hydrolase; HET: DO3; 2.20A {Pyrococcus abyssi} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.7e-47 Score=444.83 Aligned_cols=332 Identities=23% Similarity=0.321 Sum_probs=250.6
Q ss_pred HHHHHHHHHhccCCCccceEEEEEecCeeEEEeeccccCCCCCCCCCCCCcceeecchHHHHHHHHHHHHHCCCcCcCCc
Q 002031 480 AKLRDFLVELGNDGKILGIQVCAYKDGEVIIDTSAGMLGRYDPRPVQPDSLFPVFSVTKGITAGMLHWLVDNGKLKLEEN 559 (977)
Q Consensus 480 ~~l~~~l~~~~~~~~~pG~svaVv~~g~~v~~~~~G~~~~~~~~~~t~~T~f~i~SiTK~~ta~~v~~lv~~G~l~ld~~ 559 (977)
+++++++++.++++.+||++|+|+++|+++++++||+++...+.|++++|+|+|||+||+|||+++|+|+|+|+|+||+|
T Consensus 4 ~~l~~~i~~~~~~~~~pG~~v~V~~~g~~v~~~~~G~~~~~~~~~~~~dT~f~iaSvTK~fTa~~i~~Lve~G~l~Lddp 83 (447)
T 2qmi_A 4 GKLESFIVEKMAERKVPGISISIIKDGDVVYAKGFGYRNVEARLPSTPETIYGIGSITKSFTALAIMKLVEEGGLSLDDP 83 (447)
T ss_dssp HHHHHHHHHHHHHTTCCEEEEEEEETTEEEEEEEEEEEETTTTEECCSSCBEECGGGHHHHHHHHHHHHHHTTSCCTTSB
T ss_pred HHHHHHHHHHHHhcCCCeEEEEEEECCEEEEEEeeeccccccCCCCCCCCEEecceehHHHHHHHHHHHHHcCCCCCCCc
Confidence 57888899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhcc-ccccCCCCCCcHHHHhcCcCCCCCCcCC--C----CC-CCCcCCCCHHHHHHHHHc--cCCCCCCCCceeccc
Q 002031 560 IANIWP-EFKSNGKDLIKVHHVLNHTSGLHNVSVD--L----SS-ENPLLICDWDECLNRIAL--SAPETEPGQEQLYHY 629 (977)
Q Consensus 560 v~~ylP-~~~~~~~~~iTir~LLsHtSGl~~~~~~--~----~~-~~~~~~~~~~~~~~~l~~--~~~~~~pG~~~~Ysn 629 (977)
|.+||| +|...+ ++|||||||+|||||+.+... + .. .......+.+++++.+.. .++.++||+.|.|||
T Consensus 84 v~~ylP~~~~~~~-~~ITir~LLtHtSGl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~PG~~~~Ysn 162 (447)
T 2qmi_A 84 VEKFVNIKLRPFG-EPVTVHHLLTHSSGIPSLGYAEAFIDGMVGGDNWLPVSTPEETIAFARDMEKWAVAKPGERFFYLN 162 (447)
T ss_dssp GGGTSSSCCCGGG-CCCBHHHHHTTCSSCCBCSHHHHHHHHHTTCSCCCCCCSHHHHHHHGGGGGGGCCSCTTSCCCCCH
T ss_pred HHHhCChhhcCCC-CCCcHHHHhhccCCCCCCCcchhhhhhhccccccCCCCCHHHHHHHHHhcccccccCCCCceeEch
Confidence 999999 997655 789999999999999986420 0 00 011223567889988865 468899999999999
Q ss_pred CcHHHHHHHHHHHHhCCCHHHHHHHHcccccCCCCccCCCCCCCcccCcceecccCCccccccCCCCCCCCCCCCCCCcc
Q 002031 630 LSFGWLCGGIIERASGKKFQEILEEGIIQPLSIDGELYIGIPPGVESRLASLTIDTDDLNKVSGINNRPDLRLPSSFQPD 709 (977)
Q Consensus 630 ~~~~~llg~iiE~vtG~~~~~~l~~~if~PLGm~~t~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~p~~~~p~~~~~~ 709 (977)
.||. |||.|||++||++|++|++++||+||||++|.|.........+.+.+|....++...+
T Consensus 163 ~gy~-lLg~iiE~vtG~~~~~~~~~~I~~PLGm~~t~~~~~~~~~~~~~a~~y~~~~~g~~~~----------------- 224 (447)
T 2qmi_A 163 TGYV-LLGKIIEKVSGVSYEEYIKKKILEPLGMNRSYFFKEEVEKDKDVAMGYILDKEGRLVP----------------- 224 (447)
T ss_dssp HHHH-HHHHHHHHHHSSCHHHHHHHHTTTTTTCTTCBSSHHHHTTCSCBCCEEEECTTSCEEE-----------------
T ss_pred HHHH-HHHHHHHHHhCCCHHHHHHHHhccccCCCCcccccccccccCcccccceeCCCCCCcc-----------------
Confidence 9999 9999999999999999999999999999999764222122345565553321111100
Q ss_pred hhhhhhhcccccccchhccccccCccceecCHHHHHHHHHHHHcCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccccc
Q 002031 710 KISQLAAITPAVFNMLNIRRAIIPAANGHCSARALARYYAALADGGVVPPPHSRLSKPPLGSHPHIPKFPSHETSKKQKG 789 (977)
Q Consensus 710 ~~~~~~~~~~~~~~~~~~~~~~~~agG~~sTa~Dlar~~~~ll~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 789 (977)
. . ......++||++||++||+||+++++++|. + =
T Consensus 225 ----------~---~--~~~~~~~aggl~sT~~Dla~~~~~ll~~g~---~----------------------------l 258 (447)
T 2qmi_A 225 ----------Q---P--FPYGITADGGLLSSVLDLAKYLKMYIERDE---S----------------------------I 258 (447)
T ss_dssp ----------E---C--CCTTCCTTTCCEECHHHHHHHHHHHHTTCC---S----------------------------S
T ss_pred ----------c---c--CcccccCCCccccCHHHHHHHHHHHHhCCC---c----------------------------c
Confidence 0 0 001356899999999999999999999864 1 1
Q ss_pred hhHHHHHHHhhccCCCCCCcccccCCCCCccccccCcchhhhhhhcccCCCCCCCccCCCCCCCCCCcccccccCCCccc
Q 002031 790 TKKELLAALKNKTNNSEHGHKYTKDLEGGSHIRTASGDTYARLINIETSSSNTSTTDSISNTDEPQSSNVRKIFNNPRIH 869 (977)
Q Consensus 790 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 869 (977)
+|++++++|.. ++. . .|
T Consensus 259 ls~~~~~~m~~----------------------------------~~~-------------------~-------~~--- 275 (447)
T 2qmi_A 259 VSKEYIEKMET----------------------------------SYI-------------------K-------VP--- 275 (447)
T ss_dssp SCHHHHHHHTS----------------------------------CCE-------------------E-------CS---
T ss_pred CCHHHHHHHhC----------------------------------ccc-------------------c-------CC---
Confidence 34457777721 000 0 00
Q ss_pred ccccCCCCCCCCCCCCCccccceeecCCCCCCccccccCC-ccCcce--eeecCCCeEEEEEeccCCCCCChHHHHHHHH
Q 002031 870 DAFLGVGDYGDLALPNGRFGLGFKRYNTRDGSYIGFGHSG-MGGSTG--FCDVNNRFAIAVTLNKMSFGATTGRIIHFVC 946 (977)
Q Consensus 870 ~~~~~~g~~~~~~~~~~~yGlG~~~~~~~~~~~~~~gH~G-~~G~~~--~~~P~~~~~ivvl~N~~~~~~~~~~~~~~v~ 946 (977)
........||+||++... ..+..+++|+| .+|+.+ +++|+.+++||+++|..+. ....+...+.
T Consensus 276 ----------~~~~~~~~yGlG~~~~~~-~~g~~~~~h~G~~~G~~s~~~~~P~~~~~vvvl~N~~~~--~~~~~~~~~~ 342 (447)
T 2qmi_A 276 ----------WEIFGGEGYGYGLIIYPN-FLGEKLVGHSGSVGMYTGYIGYIPEKKIGVAVLENSSGY--PPSYIAMYAL 342 (447)
T ss_dssp ----------CCSSSCCEECSSSEEEEE-ETTEEEEEEEEECSSCEEEEEEETTTTEEEEEEESSSSS--CHHHHHHHHH
T ss_pred ----------cccCCCCCceEEEEEecC-CCCceEEEecCCCCCceEEEEEEeCCCeEEEEEEcCCCC--CHHHHHHHHH
Confidence 000012589999998532 23456799999 677655 7899999999999998653 2455655555
Q ss_pred HHh-CCC
Q 002031 947 SEL-NLP 952 (977)
Q Consensus 947 ~~l-~~~ 952 (977)
+.+ +.+
T Consensus 343 ~~~~~~~ 349 (447)
T 2qmi_A 343 ALLLGKN 349 (447)
T ss_dssp HHHTTCC
T ss_pred HHHhCCC
Confidence 555 443
|
| >1ci9_A ESTB, protein (carboxylesterase); hydrolase, caboxylesterase; HET: DFP; 1.80A {Burkholderia gladioli} SCOP: e.3.1.1 PDB: 1ci8_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.9e-47 Score=438.75 Aligned_cols=338 Identities=23% Similarity=0.309 Sum_probs=247.0
Q ss_pred chHHHHHHHHHHHhccCCCccceEEEEEecCeeEEEeeccccCCCCCCCCCCCCcceeecchHHHHHHHHHHHHHCCCcC
Q 002031 476 SDVEAKLRDFLVELGNDGKILGIQVCAYKDGEVIIDTSAGMLGRYDPRPVQPDSLFPVFSVTKGITAGMLHWLVDNGKLK 555 (977)
Q Consensus 476 ~~~~~~l~~~l~~~~~~~~~pG~svaVv~~g~~v~~~~~G~~~~~~~~~~t~~T~f~i~SiTK~~ta~~v~~lv~~G~l~ 555 (977)
..+.+.+++.+++.++++.+||++++|+++|++++++++|+++...+.|++++|+|+|||+||+|||+++|+|||+|+|+
T Consensus 16 ~~l~~~l~~~~~~~~~~~~~~G~~v~V~~~g~~v~~~~~G~a~~~~~~p~~~dt~f~iaSvtK~~Ta~~i~~Lve~G~l~ 95 (392)
T 1ci9_A 16 ASLAARLDAVFDQALRERRLVGAVAIVARHGEILYRRAQGLADREAGRPMREDTLFRLASVTKPIVALAVLRLVARGELA 95 (392)
T ss_dssp HHHHHHHHHHHHHHHHTTSCSEEEEEEEETTEEEEEEEEEEEETTTTEECCTTCBEECGGGHHHHHHHHHHHHHHHTSSC
T ss_pred HHHHHHHHHHHHHHHhcCCCceEEEEEEECCeEEEEEEEeccccCCCCCCCCCCeEeeeechHHHHHHHHHHHHHcCCCC
Confidence 46678899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCchhhhcccccc----CCCCCCcHHHHhcCcCCCCCCcCCC----------CCCCCcCCCCHHHHHHHHHccCCCCCC
Q 002031 556 LEENIANIWPEFKS----NGKDLIKVHHVLNHTSGLHNVSVDL----------SSENPLLICDWDECLNRIALSAPETEP 621 (977)
Q Consensus 556 ld~~v~~ylP~~~~----~~~~~iTir~LLsHtSGl~~~~~~~----------~~~~~~~~~~~~~~~~~l~~~~~~~~p 621 (977)
||+||.+|||+|.. ..+++|||||||+|||||+...... ....+...++.+++++.+...++.++|
T Consensus 96 ldd~v~~ylP~~~~~~~~~~~~~ITir~LLtHtSGl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P 175 (392)
T 1ci9_A 96 LDAPVTRWLPEFRPRLADGSEPLVTIHHLLTHTSGLGYWLLEGAGSVYDRLGISDGIDLRDFDLDENLRRLASAPLSFAP 175 (392)
T ss_dssp TTSBGGGTCTTCCCBCTTSCCCCCBHHHHHHTCSSCCCHHHHCTTSHHHHHTCCCSSSCCSSCHHHHHHHHHHSBCSSCT
T ss_pred CCCcHHHHhhhhccccCCcccCCCcHHHHhhccCCCCCCccccccchhHHHhhhccCCcCCCCHHHHHHHHhcCCcccCC
Confidence 99999999999964 2467899999999999998632100 000112235889999999999999999
Q ss_pred CCceecccCcHHHHHHHHHHHHhCCCHHHHHHHHcccccCCCCccCCCCCCCcccCcceecccCCccc-cccCCCCCCCC
Q 002031 622 GQEQLYHYLSFGWLCGGIIERASGKKFQEILEEGIIQPLSIDGELYIGIPPGVESRLASLTIDTDDLN-KVSGINNRPDL 700 (977)
Q Consensus 622 G~~~~Ysn~~~~~llg~iiE~vtG~~~~~~l~~~if~PLGm~~t~~~~~~~~~~~~~a~~~~~~~~~~-~~~~~~~~p~~ 700 (977)
|+.|.||| +|. |||.|||++||++|++|++++||+||||++|.|... ...+++..|....... ........+
T Consensus 176 G~~~~Ys~-~~~-lLg~iie~vtG~~~~~~~~~~I~~PLgm~~t~~~~~---~~~~~a~~y~~~~~~~~~~~~~~~~~-- 248 (392)
T 1ci9_A 176 GSGWQYSL-ALD-VLGAVVERATGQPLAAAVDALVAQPLGMRDCGFVSA---EPERFAVPYHDGQPEPVRMRDGIEVP-- 248 (392)
T ss_dssp TSCCCCCT-HHH-HHHHHHHHHHTSCHHHHHHHHTHHHHTCCSCBSCCS---CGGGBCCCEECCSSSCEECCTTEEEE--
T ss_pred CCCeeCcC-HHH-HHHHHHHHHhCCCHHHHHHHhCCCCCCCCcCCccCC---CcccceeeeecCCCCccccccccccc--
Confidence 99999998 676 999999999999999999999999999999976432 3455666664321100 000000000
Q ss_pred CCCCCCCcchhhhhhhccc-ccccchhccccccCccceecCHHHHHHHHHHHHcC-CCCCCCCCCCCCCCCCCCCCCCCC
Q 002031 701 RLPSSFQPDKISQLAAITP-AVFNMLNIRRAIIPAANGHCSARALARYYAALADG-GVVPPPHSRLSKPPLGSHPHIPKF 778 (977)
Q Consensus 701 ~~p~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~agG~~sTa~Dlar~~~~ll~~-g~~~~~~~~~~~~~~~~~~~~~~~ 778 (977)
.+.++... . ...+ ...+. .....++||++||++||+||+++++++ ..
T Consensus 249 -~~~g~~~~-~----~~~~~~~~~~---~~~~~g~ggl~sTa~Dl~~~~~~ll~~~~l---------------------- 297 (392)
T 1ci9_A 249 -LPEGHGAA-V----RFAPSRVFEP---GAYPSGGAGMYGSADDVLRALEAIRANPGF---------------------- 297 (392)
T ss_dssp -CCTTSCSE-E----EECGGGGGCT---TSCCCTTTCCEECHHHHHHHHHHHHHCSSS----------------------
T ss_pred -cccccccc-c----ccccccccCC---cccCcCCcccccCHHHHHHHHHHHhCCCcc----------------------
Confidence 00000000 0 0000 00000 122357899999999999999999995 33
Q ss_pred CCccccccccchhHHHHHHHhhccCCCCCCcccccCCCCCccccccCcchhhhhhhcccCCCCCCCccCCCCCCCCCCcc
Q 002031 779 PSHETSKKQKGTKKELLAALKNKTNNSEHGHKYTKDLEGGSHIRTASGDTYARLINIETSSSNTSTTDSISNTDEPQSSN 858 (977)
Q Consensus 779 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 858 (977)
++++++++|.. ++. ..
T Consensus 298 -----------ls~~~~~~m~~----------------------------------~~~-------------------~~ 313 (392)
T 1ci9_A 298 -----------LPETLADAARR----------------------------------DQA-------------------GV 313 (392)
T ss_dssp -----------SCHHHHHHHHS----------------------------------CSS-------------------CG
T ss_pred -----------cCHHHHHHHhc----------------------------------cCc-------------------CC
Confidence 23457777731 000 00
Q ss_pred cccccCCCcccccccCCCCCCCCCCCCCccccceeecCCC-----CCCccccccCCccCcceeeecCCCeEEEEEeccCC
Q 002031 859 VRKIFNNPRIHDAFLGVGDYGDLALPNGRFGLGFKRYNTR-----DGSYIGFGHSGMGGSTGFCDVNNRFAIAVTLNKMS 933 (977)
Q Consensus 859 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~yGlG~~~~~~~-----~~~~~~~gH~G~~G~~~~~~P~~~~~ivvl~N~~~ 933 (977)
. + .......+||+||++.... ......+||+|.+|+..|++|+.+++||+++|...
T Consensus 314 ----~------~---------~~~~~~~~yGlG~~~~~~~~~~~~~~~~g~~g~~G~~gs~~~~~P~~~~~vv~l~N~~~ 374 (392)
T 1ci9_A 314 ----G------A---------ETRGPGWGFGYLSAVLDDPAAAGTPQHAGTLQWGGVYGHSWFVDRALGLSVLLLTNTAY 374 (392)
T ss_dssp ----G------G---------CTTSTTEEECSSSEEESCHHHHTCSSCTTCEEEEETTTEEEEEEGGGTEEEEEEESEET
T ss_pred ----c------c---------cCCCCCCceeeeEEEecccccccCCCCCCeEeeCCccccEEEEECCCCEEEEEEEecCC
Confidence 0 0 0001235899999986421 12334689999999999999999999999999865
Q ss_pred C
Q 002031 934 F 934 (977)
Q Consensus 934 ~ 934 (977)
.
T Consensus 375 ~ 375 (392)
T 1ci9_A 375 E 375 (392)
T ss_dssp H
T ss_pred C
Confidence 4
|
| >3tg9_A Penicillin-binding protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.20A {Bacillus halodurans} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.2e-47 Score=433.69 Aligned_cols=239 Identities=21% Similarity=0.260 Sum_probs=192.7
Q ss_pred HHHHHHHhccCCCccceEEEEEecCeeEEEeeccccCCCCCCCCCCCCcceeecchHHHHHHHHHHHHHCCCcCcCCchh
Q 002031 482 LRDFLVELGNDGKILGIQVCAYKDGEVIIDTSAGMLGRYDPRPVQPDSLFPVFSVTKGITAGMLHWLVDNGKLKLEENIA 561 (977)
Q Consensus 482 l~~~l~~~~~~~~~pG~svaVv~~g~~v~~~~~G~~~~~~~~~~t~~T~f~i~SiTK~~ta~~v~~lv~~G~l~ld~~v~ 561 (977)
+++.++++++++.+||+ ++|+++|+++++++||+++...+.|++++|+|+|||+||+|||+++++|+|+|+|+||+||.
T Consensus 3 ld~~i~~~~~~~~~~G~-v~v~~~g~~v~~~~~G~a~~~~~~p~~~~t~f~iaSitK~~Ta~~i~~Lve~G~l~Ldd~v~ 81 (356)
T 3tg9_A 3 MKNHLHTIMEDWKLSGT-ALMKKGEDIPFIASLGFANRAERIPNEHHTRFGIASGCKLFTAIAICQLVEAGKLSFDTPLS 81 (356)
T ss_dssp CCCHHHHHHHHHTCCEE-EEEEETTSCCEEEEESEEETTTTEECCTTCBEECGGGGHHHHHHHHHHHHHHTSCCTTCBGG
T ss_pred HHHHHHHHHHhCCCCeE-EEEEECCeEEEEeeecccccccCCCCCCCCeEEcccchHHHHHHHHHHHHHcCCCCcccCHH
Confidence 35567777888899999 56889999999999999999999999999999999999999999999999999999999999
Q ss_pred hhcc-ccccCCCCCCcHHHHhcCcCCCCCCcCCCCC---------CCCcCCCCHHHHHHHHHccCCCCCCCCceecccCc
Q 002031 562 NIWP-EFKSNGKDLIKVHHVLNHTSGLHNVSVDLSS---------ENPLLICDWDECLNRIALSAPETEPGQEQLYHYLS 631 (977)
Q Consensus 562 ~ylP-~~~~~~~~~iTir~LLsHtSGl~~~~~~~~~---------~~~~~~~~~~~~~~~l~~~~~~~~pG~~~~Ysn~~ 631 (977)
+||| +| ++|||||||+|||||+++...... .......+.+++++.+...++.++||+.|.|||.|
T Consensus 82 ~ylP~~~-----~~ITir~LLtHtSGl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~PG~~~~Ysn~~ 156 (356)
T 3tg9_A 82 DWLDAPF-----PNVTIHHLLTHTSGVPDYFDEEITDDFEDLWKDVPMYHLRRLKDFLPLFQHAPMKFPPGHRFHYNNAG 156 (356)
T ss_dssp GTCSSCC-----TTCBHHHHHTTCSCCCCSCCC-------CGGGTSCGGGCCSGGGGGGGTTTSCCCSCTTSCCCCCHHH
T ss_pred HhCCCCc-----CCccHHHHhhCcCCCCCcccchhhhhHHHhhcccccccccCHHHHHHHHhhCCCCCCCCCCceeCcHH
Confidence 9999 77 579999999999999986432111 11112346678888888889999999999999999
Q ss_pred HHHHHHHHHHHHhCCCHHHHHHHHcccccCCCCccCCCCCCCcccCcceecccCCccccccCCCCCCCCCCCCCCCcchh
Q 002031 632 FGWLCGGIIERASGKKFQEILEEGIIQPLSIDGELYIGIPPGVESRLASLTIDTDDLNKVSGINNRPDLRLPSSFQPDKI 711 (977)
Q Consensus 632 ~~~llg~iiE~vtG~~~~~~l~~~if~PLGm~~t~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~p~~~~p~~~~~~~~ 711 (977)
|. |||.|||++||++|++|++++||+||||++|.|.. ++....+.+.+|....+..... +
T Consensus 157 ~~-lLg~iie~vtg~~~~~~~~~~I~~PLGm~~t~~~~-~~~~~~~~a~gy~~~~~~~~~~----~-------------- 216 (356)
T 3tg9_A 157 FI-LLGLVVESVSGVTFQEYVEANVFQRAGMHESGYFA-FDTLPAKTALGYIDLEDGSWKT----N-------------- 216 (356)
T ss_dssp HH-HHHHHHHHHHSSCHHHHHHHHTHHHHTCTTCBCCB-GGGCCSSBCCCEEECTTSCEEE----S--------------
T ss_pred HH-HHHHHHHHHhCCCHHHHHHHHhhcccCCcccccCC-ccccCcccceeeeecCCCceee----c--------------
Confidence 98 99999999999999999999999999999997643 3334455666665322221111 0
Q ss_pred hhhhhcccccccchhccccccCccceecCHHHHHHHHHHHHcCCCCC
Q 002031 712 SQLAAITPAVFNMLNIRRAIIPAANGHCSARALARYYAALADGGVVP 758 (977)
Q Consensus 712 ~~~~~~~~~~~~~~~~~~~~~~agG~~sTa~Dlar~~~~ll~~g~~~ 758 (977)
.........++||++||++||+||+++++++..++
T Consensus 217 ------------~~~~~~~~~~aggl~sT~~Dl~~~~~~ll~~~lls 251 (356)
T 3tg9_A 217 ------------LYSLPVIGGSDGGAYVTAEDMMKLWLALMRHELLN 251 (356)
T ss_dssp ------------TTTSCSBCCSSSCCEECHHHHHHHHHHHHTTSSSC
T ss_pred ------------cccCCccccCCccEEECHHHHHHHHHHHhcCCCCC
Confidence 00111223488999999999999999999875543
|
| >3o3v_A Beta-lactamase, CLBP protein; alpha/beta, disulfide bridge, hydrolase; 2.40A {Escherichia coli} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.8e-47 Score=431.03 Aligned_cols=321 Identities=18% Similarity=0.211 Sum_probs=242.7
Q ss_pred HHHHHHHHhccCCCccceEEEE-EecCeeEEEeeccccCCCCCCCCCCCCcceeecchHHHHHHHHHHHHHCCCcCcCCc
Q 002031 481 KLRDFLVELGNDGKILGIQVCA-YKDGEVIIDTSAGMLGRYDPRPVQPDSLFPVFSVTKGITAGMLHWLVDNGKLKLEEN 559 (977)
Q Consensus 481 ~l~~~l~~~~~~~~~pG~svaV-v~~g~~v~~~~~G~~~~~~~~~~t~~T~f~i~SiTK~~ta~~v~~lv~~G~l~ld~~ 559 (977)
++++++++.++++.+||++++| +++|++++ +||+++...+.|++++|+|+|||+||+|||+++++|+|+|+|+||+|
T Consensus 2 ~l~~~i~~~~~~~~~pG~~v~v~~~~g~~~~--~~G~~~~~~~~~~~~~t~f~i~SitK~~ta~~i~~lve~G~l~ld~~ 79 (335)
T 3o3v_A 2 RLSTLIHQRMQEAKVPALSVSVTIKGVRQRF--VYGVADVASQKANTLDTVYELGSMSKAFTGLVVQILIQEGRLRQGDD 79 (335)
T ss_dssp CHHHHHHHHHHHHTCSEEEEEEEETTEEEEE--EEEEEETTTTEECCTTCBEECGGGGHHHHHHHHHHHHHTTSCCTTSB
T ss_pred hHHHHHHHHHHhcCCCcEEEEEEEeCCEEEE--EEEeccccCCCCCCCCCEeehhhhHHHHHHHHHHHHHHCCCCCCCCc
Confidence 4677888888889999999999 99999999 89999999999999999999999999999999999999999999999
Q ss_pred hhhhccccccC---CCCCCcHHHHhcCcCCCCCCcCCCCCCCCcCCCCHHHHHHHHHccCCCCCCCCceecccCcHHHHH
Q 002031 560 IANIWPEFKSN---GKDLIKVHHVLNHTSGLHNVSVDLSSENPLLICDWDECLNRIALSAPETEPGQEQLYHYLSFGWLC 636 (977)
Q Consensus 560 v~~ylP~~~~~---~~~~iTir~LLsHtSGl~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~pG~~~~Ysn~~~~~ll 636 (977)
|.+|||++... ..++|||||||+|||||+.+....... ..+.+++++.+...++.++||+.|.|||.+|. ||
T Consensus 80 v~~ylp~~~~~~~~~~~~iTi~~LL~htSGl~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~pG~~~~Ysn~~~~-lL 154 (335)
T 3o3v_A 80 IITYLPEMRLNYQGKPASLTVADFLYHTSGLPFSTLARLEN----PMPGSAVAQQLRNENLLFAPGAKFSYASANYD-VL 154 (335)
T ss_dssp HHHHCTTCCEEETTEECCCBHHHHHTTCSCCCTHHHHHHHS----CCSSCCHHHHSTTEECSSCTTSCCCCCTTHHH-HH
T ss_pred hHHhCcccccccCCCCCCccHHHHhhccCCCCCcccccccc----cCChHHHHHHHhcCCcccCCCCceeEchHHHH-HH
Confidence 99999999732 236899999999999999743211100 11223457788888999999999999999999 99
Q ss_pred HHHHHHHhCCCHHHHHHHHcccccCCCCccCCCCCCCcccCcceecccCCccccccCCCCCCCCCCCCCCCcchhhhhhh
Q 002031 637 GGIIERASGKKFQEILEEGIIQPLSIDGELYIGIPPGVESRLASLTIDTDDLNKVSGINNRPDLRLPSSFQPDKISQLAA 716 (977)
Q Consensus 637 g~iiE~vtG~~~~~~l~~~if~PLGm~~t~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~p~~~~p~~~~~~~~~~~~~ 716 (977)
|.|||+++|++|+++++++||+||||++|.|. .+.....+.+.+|....... ..
T Consensus 155 g~iie~vtg~~~~~~~~~~i~~PLgm~~t~~~-~~~~~~~~~a~gy~~~~~~~-~~------------------------ 208 (335)
T 3o3v_A 155 GAVIENVTGKTFTEVIAERLTQPLGMSATVAV-KGDEIIVNKASGYKLGFGKP-VL------------------------ 208 (335)
T ss_dssp HHHHHHHHSSCHHHHHHHHTHHHHTCSSCEEC-CSSCCCTTBCCCBCCSSSCC-BC------------------------
T ss_pred HHHHHHHhCCCHHHHHHHHhccccCCCccccC-cccccccCccccccccCCCc-ee------------------------
Confidence 99999999999999999999999999999764 33444566666664322110 00
Q ss_pred cccccccchhccccccCccceecCHHHHHHHHHHHHcCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccccchhHHHHH
Q 002031 717 ITPAVFNMLNIRRAIIPAANGHCSARALARYYAALADGGVVPPPHSRLSKPPLGSHPHIPKFPSHETSKKQKGTKKELLA 796 (977)
Q Consensus 717 ~~~~~~~~~~~~~~~~~agG~~sTa~Dlar~~~~ll~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 796 (977)
.+.+ ......++||++||++||+||+++++++|..+ .+++++++
T Consensus 209 -----~~~~-~~~~~~~aggl~sT~~Dl~~~~~~ll~~g~~~------------------------------~~~~~~~~ 252 (335)
T 3o3v_A 209 -----FHAP-LARNHVPAAYIHSTLPDMEIWIDAWLHRKALP------------------------------ATLREAMS 252 (335)
T ss_dssp -----CCSC-CCSTTHHHHTEEECHHHHHHHHHHHHTGGGSC------------------------------HHHHHHHH
T ss_pred -----ccCc-cccCCCCCcccEeCHHHHHHHHHHHcCCCCcc------------------------------ccCHHHHH
Confidence 0000 11234578999999999999999999876432 13445565
Q ss_pred HHhhccCCCCCCcccccCCCCCccccccCcchhhhhhhcccCCCCCCCccCCCCCCCCCCcccccccCCCcccccccCCC
Q 002031 797 ALKNKTNNSEHGHKYTKDLEGGSHIRTASGDTYARLINIETSSSNTSTTDSISNTDEPQSSNVRKIFNNPRIHDAFLGVG 876 (977)
Q Consensus 797 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 876 (977)
++.. . .. . . .|
T Consensus 253 ~~~~------------------------------~----~~-----~----~----------------~~---------- 263 (335)
T 3o3v_A 253 NSWR------------------------------G----NS-----D----V----------------PL---------- 263 (335)
T ss_dssp HHTC------------------------------C----CC-----S----S----------------CC----------
T ss_pred HHhC------------------------------c----Cc-----c----c----------------CC----------
Confidence 5510 0 00 0 0 00
Q ss_pred CCCCCCCCC-CccccceeecCCCCCCccccccCC-ccCcce--eeecCCCeEEEEEeccCCCCCChHHHHHHHHHHh
Q 002031 877 DYGDLALPN-GRFGLGFKRYNTRDGSYIGFGHSG-MGGSTG--FCDVNNRFAIAVTLNKMSFGATTGRIIHFVCSEL 949 (977)
Q Consensus 877 ~~~~~~~~~-~~yGlG~~~~~~~~~~~~~~gH~G-~~G~~~--~~~P~~~~~ivvl~N~~~~~~~~~~~~~~v~~~l 949 (977)
.... ..||+||++... ++. .++|+| .+|+.+ +++|+.+++||+++|.... ....+.+.|.+.|
T Consensus 264 -----~~~~~~~yG~Gw~~~~~--~~~-~~~h~G~~~G~~s~~~~~P~~~~~vvvl~N~~~~--~~~~l~~~i~~~l 330 (335)
T 3o3v_A 264 -----AADNRILYASGWFIDQN--QGP-YISHGGQNPNFSSCIALRPDQQIGIVALANMNSN--LILQLCADIDNYL 330 (335)
T ss_dssp -----CSSCCCEECSSCEEECT--TSC-EEEEEEECSSCEEEEEEEGGGTEEEEEEESBCCH--HHHHHHHHHHHHH
T ss_pred -----CCCCcCceeeeEEEEeC--CCe-EEEeCCCCCCeeEEEEEEecCCeEEEEEECCCCc--cHHHHHHHHHHHH
Confidence 0011 489999999763 233 499999 555544 8999999999999999532 3556666666665
|
| >3hlc_A Transesterase, LOVD; alpha/beta hydrolase fold, transferase; HET: PG4; 2.00A {Aspergillus terreus} PDB: 3hld_A* 3hlf_A* 3hle_A* 3hlg_A* 3hlb_A 3hl9_A | Back alignment and structure |
|---|
Probab=100.00 E-value=5.1e-46 Score=432.76 Aligned_cols=363 Identities=16% Similarity=0.148 Sum_probs=253.6
Q ss_pred cchHHHHHHHHHHHhccCCCccceEEEEE-ecCeeEEEeeccccCCCCCC-----CCCCCCcceeecchHHHHHHHHHHH
Q 002031 475 HSDVEAKLRDFLVELGNDGKILGIQVCAY-KDGEVIIDTSAGMLGRYDPR-----PVQPDSLFPVFSVTKGITAGMLHWL 548 (977)
Q Consensus 475 ~~~~~~~l~~~l~~~~~~~~~pG~svaVv-~~g~~v~~~~~G~~~~~~~~-----~~t~~T~f~i~SiTK~~ta~~v~~l 548 (977)
...+.+++++.+++.++++.+||++++|+ ++|+++++++||+++...+. |++++|+|+|+|+||+|||+++|+|
T Consensus 29 ~~~~~~~l~~~l~~~~~~~~~pG~~v~vv~~~G~iv~~~~~G~~~~~~~~~~~~~p~~~dt~f~i~S~TK~~ta~~i~~L 108 (432)
T 3hlc_A 29 AAGPVVLMETAFRKAVESRQIPGAVIMARDASGNLNYTRCFGARTVRRDENNQLPPLQVDTPCRLASATKLLTTIMVLQC 108 (432)
T ss_dssp CCCHHHHHHHHHHHHHHTTSCSEEEEEEEESSSSCEEEEEEEBSCSSCCTTSCCCBCCTTCCEECGGGHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHcCCCCeEEEEEEecCCeEEEEeeeeeccccccCccCCCCCCCCCEEEchhhHHHHHHHHHHHH
Confidence 45677889999999999999999999988 89999999999999998877 9999999999999999999999999
Q ss_pred HHCCCcCcCCchhhhccccccC-----------------CCCCCcHHHHhcCcCCCCCCcCCCC-----CCCCcCCCCHH
Q 002031 549 VDNGKLKLEENIANIWPEFKSN-----------------GKDLIKVHHVLNHTSGLHNVSVDLS-----SENPLLICDWD 606 (977)
Q Consensus 549 v~~G~l~ld~~v~~ylP~~~~~-----------------~~~~iTir~LLsHtSGl~~~~~~~~-----~~~~~~~~~~~ 606 (977)
+|+|+|+||+||.+|||+|... .++ |||||||+|||||+....... ..........+
T Consensus 109 ve~G~l~Lddpv~~ylPe~~~~~v~~~~~~~~~~~~~~~~~~-ITir~LLthtSGl~~~~~~~~~~~~~~~~~~~~~~~~ 187 (432)
T 3hlc_A 109 MERGLVDLDETVDRLLPDLSAMPVLEGFDDAGNARLRERRGK-ITLRHLLTHTSGLSYVFLHPLLREYMAQGYLQSAEKF 187 (432)
T ss_dssp HHTTSCCTTSBTTTTCHHHHTCCEEEEECTTCCEEEECCSSC-CBHHHHHTTCSSCCCGGGCHHHHHHHHTTCCCC----
T ss_pred HHCCCCCCCCcHHHhhhhhcccccccccccccCccccCCCCC-CcHHHHHhCcCCCCCCCCChhHHHHHhcCCCCCCcHH
Confidence 9999999999999999998753 234 999999999999986432110 00000011222
Q ss_pred HHHHHHHccCCCCCCCCceecccCcHHHHHHHHHHHHhCCCHHHHHHHHcccccCCCCccCCCC-CCCcccCcceecccC
Q 002031 607 ECLNRIALSAPETEPGQEQLYHYLSFGWLCGGIIERASGKKFQEILEEGIIQPLSIDGELYIGI-PPGVESRLASLTIDT 685 (977)
Q Consensus 607 ~~~~~l~~~~~~~~pG~~~~Ysn~~~~~llg~iiE~vtG~~~~~~l~~~if~PLGm~~t~~~~~-~~~~~~~~a~~~~~~ 685 (977)
.+.. +...++.++||+.|.|| .+|. +||.|||++||++|++|++++||+||||++|.|... .+....+.+..|...
T Consensus 188 ~~~~-~~~~pl~~~PG~~~~Ys-~~~~-lLg~iie~vtG~~~~~~~~~~I~~PLGm~~t~f~~~~~~~~~~~~a~~~~~~ 264 (432)
T 3hlc_A 188 GIQS-RLAPPAVNDPGAEWIYG-TNLD-WAGKLVERATGLDLEQYLQENICAPLGITDMTFKLQQRPDMLARRADQTHRN 264 (432)
T ss_dssp -----CSCSCBSSCTTSCCCCC-THHH-HHHHHHHHHHSSCHHHHHHHHTHHHHTCCSEESCGGGCHHHHHHCCCEEEEC
T ss_pred HHHH-HhcCCCccCCCCCeecc-hHHH-HHHHHHHHHHCCCHHHHHHHHHhcccCCccceecCCCChHHhcccccceeEC
Confidence 3333 34468899999999999 7998 999999999999999999999999999999977432 134455666666543
Q ss_pred CccccccCCCCCCCCCCCCCCCcchhhhhhhcccccccchhccccccCccceecCHHHHHHHHHHHHcCCCCCCCCCCCC
Q 002031 686 DDLNKVSGINNRPDLRLPSSFQPDKISQLAAITPAVFNMLNIRRAIIPAANGHCSARALARYYAALADGGVVPPPHSRLS 765 (977)
Q Consensus 686 ~~~~~~~~~~~~p~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~agG~~sTa~Dlar~~~~ll~~g~~~~~~~~~~ 765 (977)
.++...+. |. ............++||+++|++||+||++++|++| .+
T Consensus 265 ~~g~~~~~----~~---------------------~~~~~~~~~~~~g~gGl~sTa~Dlarf~~~ll~~g----~~---- 311 (432)
T 3hlc_A 265 SADGRLRY----DD---------------------SVYFRADGEECFGGQGVFSSPGSYMKVLHSLLKRD----GL---- 311 (432)
T ss_dssp TTTCCEEE----EC---------------------CGGGTCCCSSCCTTTCCEECHHHHHHHHHHHHHTC----SS----
T ss_pred CCCceeec----CC---------------------cccccCCCCCCcCCCcceECHHHHHHHHHHHHhCC----Cc----
Confidence 33222110 00 00001111234588999999999999999999975 21
Q ss_pred CCCCCCCCCCCCCCCccccccccchhHHHHHHHhhccCCCCCCcccccCCCCCccccccCcchhhhhhhcccCCCCCCCc
Q 002031 766 KPPLGSHPHIPKFPSHETSKKQKGTKKELLAALKNKTNNSEHGHKYTKDLEGGSHIRTASGDTYARLINIETSSSNTSTT 845 (977)
Q Consensus 766 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 845 (977)
=++++++++|.. +.. . .-..
T Consensus 312 -----------------------lLs~~~v~~m~~-------------~~~---------~-~~~~-------------- 331 (432)
T 3hlc_A 312 -----------------------LLQPQTVDLMFQ-------------PAL---------E-PRLE-------------- 331 (432)
T ss_dssp -----------------------SSCHHHHHHHTS-------------CCC---------C-HHHH--------------
T ss_pred -----------------------cCCHHHHHHHhc-------------cCC---------C-chhh--------------
Confidence 145567777731 000 0 0000
Q ss_pred cCCCCCCCCCCcccccccCCCcccccccCCCCCCCCCCCCCccccceeecCCC-----CCCccccccCCccCcceeeecC
Q 002031 846 DSISNTDEPQSSNVRKIFNNPRIHDAFLGVGDYGDLALPNGRFGLGFKRYNTR-----DGSYIGFGHSGMGGSTGFCDVN 920 (977)
Q Consensus 846 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~yGlG~~~~~~~-----~~~~~~~gH~G~~G~~~~~~P~ 920 (977)
......+..+... .+.. |. ......+||+||++.... ..+...|+|.|++|+++|+||+
T Consensus 332 -----------~~~~~~~~~~~~~-~~~~-~~---~~~~~~gyGlg~~~~~~~~~~~~~~~~g~~~w~G~~g~~~~vdP~ 395 (432)
T 3hlc_A 332 -----------EQMNQHMDASPHI-NYGG-PM---PMVLRRSFGLGGIIALEDLDGENWRRKGSLTFGGGPNIVWQIDPK 395 (432)
T ss_dssp -----------HHHHHHHHTCTTT-CTTT-TS---CSSCCEEECSSSEEESSCSSTTSSCCTTCEEEEETTTEEEEEETT
T ss_pred -----------hhhhhhccccccc-cccc-CC---CCCCCCcCccceEEEecCccCCCCCCCceeEeCCcccCeEEEEcc
Confidence 0000000000000 0000 00 001236899999986522 2234569999999999999999
Q ss_pred CCeEEEEEeccCCCCC-----ChHHHHHHHHHHhC
Q 002031 921 NRFAIAVTLNKMSFGA-----TTGRIIHFVCSELN 950 (977)
Q Consensus 921 ~~~~ivvl~N~~~~~~-----~~~~~~~~v~~~l~ 950 (977)
.++++|+++|..+.++ ....+.++|+++|+
T Consensus 396 ~~l~~v~~tn~~p~~~~~~~~~~~~~~~~vy~al~ 430 (432)
T 3hlc_A 396 AGLCTLAFFQLEPWNDPVCRDLTRTFEHAIYAQYQ 430 (432)
T ss_dssp TTEEEEEECCEESSSCHHHHHHHHHHHHHHHHHHC
T ss_pred CCEEEEEEEcCCCCcCcchHHHHHHHHHHHHHHhh
Confidence 9999999999977664 36777788888774
|
| >1ei5_A D-aminopeptidase, DAP; penicillin binding protein, alpha/beta domain, beta barrel domain, hydrolase; 1.90A {Ochrobactrum anthropi} SCOP: b.61.3.1 b.61.3.1 e.3.1.1 | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-44 Score=429.80 Aligned_cols=237 Identities=19% Similarity=0.212 Sum_probs=188.3
Q ss_pred HHHHHHHHHhccCCCccceEEEEEecCeeEEEeeccccCCCCCCCCCCCCcceeecchHHHHHHHHHHHHHCCCcCcCCc
Q 002031 480 AKLRDFLVELGNDGKILGIQVCAYKDGEVIIDTSAGMLGRYDPRPVQPDSLFPVFSVTKGITAGMLHWLVDNGKLKLEEN 559 (977)
Q Consensus 480 ~~l~~~l~~~~~~~~~pG~svaVv~~g~~v~~~~~G~~~~~~~~~~t~~T~f~i~SiTK~~ta~~v~~lv~~G~l~ld~~ 559 (977)
+++++.++++++++.+||++++|+++|+++++++||+++...+.|++++|+|+|||+||+|||+++|+|+++| |+||||
T Consensus 7 ~~l~~~l~~~~~~~~~pG~~v~V~~~g~~v~~~~~G~~~~~~~~~~~~dT~f~iaSvTK~fTa~~i~~Lve~G-l~Lddp 85 (520)
T 1ei5_A 7 SALEAFVRHIPQNYKGPGGVVAVVKDGEVVLQHAWGFADLRTRTPMTLDTRMPICSVSKQFTCAVLLDAVGEP-ELLDDA 85 (520)
T ss_dssp HHHHHHHHTHHHHSCSSEEEEEEEETTEEEEEEEEEEEETTTTEECCTTCCEECGGGHHHHHHHHHHHHTCSG-GGGHHH
T ss_pred HHHHHHHHHHHHhcCCCcEEEEEEECCEEEEEEEEEecccccCCCCCCCCeEechhhHHHHHHHHHHHHHHcC-CCCCCc
Confidence 5677888888888899999999999999999999999999999999999999999999999999999999999 999999
Q ss_pred hhhhccccccCCCCCCcHHHHhcCcCCCCCCcCC--CCCCCCcCCCCHHHHHHHHHcc-CCCCCCCCceecccCcHHHHH
Q 002031 560 IANIWPEFKSNGKDLIKVHHVLNHTSGLHNVSVD--LSSENPLLICDWDECLNRIALS-APETEPGQEQLYHYLSFGWLC 636 (977)
Q Consensus 560 v~~ylP~~~~~~~~~iTir~LLsHtSGl~~~~~~--~~~~~~~~~~~~~~~~~~l~~~-~~~~~pG~~~~Ysn~~~~~ll 636 (977)
|.+|||+|.. +.|||||||+|||||+++... .....+....+.+++.+.+... ++.++||+.|.|||.||. ||
T Consensus 86 v~~ylP~~~~---~~ITir~LLtHtSGl~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~PG~~~~Ysn~gy~-lL 161 (520)
T 1ei5_A 86 LEAYLDKFED---ERPAVRDLCNNQSGLRDYWALSVLCGADPEGVFLPAQAQSLLRRLKTTHFEPGSHYSYCNGNFR-IL 161 (520)
T ss_dssp HHHHTTTCCS---CCCCHHHHHTTCSCCCCHHHHHHHTTCCTTCCBCHHHHHHHHHTCCCCSSCTTSSCCCCHHHHH-HH
T ss_pred HHHhcCcCCC---CCCCHHHHHhCcCCCCCcccchhhccCCcccCCCHHHHHHHHHhcCcccCCCCCceEECcHHHH-HH
Confidence 9999999974 469999999999999975321 0112223334677777777764 568999999999999998 99
Q ss_pred HHHHHHHhCCCHHHHHHHHcccccCCCCccCCCCCCCcccCcceecccCCccccccCCCCCCCCCCCCCCCcchhhhhhh
Q 002031 637 GGIIERASGKKFQEILEEGIIQPLSIDGELYIGIPPGVESRLASLTIDTDDLNKVSGINNRPDLRLPSSFQPDKISQLAA 716 (977)
Q Consensus 637 g~iiE~vtG~~~~~~l~~~if~PLGm~~t~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~p~~~~p~~~~~~~~~~~~~ 716 (977)
|.|||++||++|++|++++||+||||++|.+.... .. .+.+.+|.........+
T Consensus 162 g~iiE~vtG~~~~~~l~~~I~~PLGm~~t~~~~~~-~~-~~~a~gy~~~~~~~~~~------------------------ 215 (520)
T 1ei5_A 162 ADLIEAHTGRTLVDILSERIFAPAGMKRAELISDT-AL-FDECTGYEGDTVRGFLP------------------------ 215 (520)
T ss_dssp HHHHHHHHTSCHHHHHHHHTHHHHTCTTCEECCBG-GG-CCSSCCEEEETTTEEEE------------------------
T ss_pred HHHHHHHHCCCHHHHHHHhhhcccCCCccCcCCcc-cc-cccccccccCccccccc------------------------
Confidence 99999999999999999999999999998663221 11 22233332111000000
Q ss_pred cccccccchhccccccCccceecCHHHHHHHHHHHHcCC
Q 002031 717 ITPAVFNMLNIRRAIIPAANGHCSARALARYYAALADGG 755 (977)
Q Consensus 717 ~~~~~~~~~~~~~~~~~agG~~sTa~Dlar~~~~ll~~g 755 (977)
..+. ....++||++||++||+||+++++++.
T Consensus 216 ----~~~~----~~~~g~gGl~sT~~Dl~r~~~~l~~~~ 246 (520)
T 1ei5_A 216 ----ATNR----IQWMGDAGICASLNDMIAWEQFIDATR 246 (520)
T ss_dssp ----CCCC----BBCCSSSCEEECHHHHHHHHHHHHHTT
T ss_pred ----cccc----ccccCCcccccCHHHHHHHHHHHhhCC
Confidence 0011 123578999999999999999988653
|
| >2dcf_A 6-aminohexanoate-dimer hydrolase; HET: ACA MES; 1.40A {Flavobacterium SP} SCOP: e.3.1.1 PDB: 3a65_A* 1wyc_A 2zm7_A* 2e8i_A* 2zma_A* 3a66_A* 2zm0_A* 1wyb_A 2zm8_A* 2zly_A* 2zm9_A* 2zm2_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.6e-43 Score=405.91 Aligned_cols=300 Identities=16% Similarity=0.165 Sum_probs=228.2
Q ss_pred HHHHhccCCCccceEEEEEecCeeEEEeeccccCCCCCCCCCCCCcceeecchHHHHHHHHHHHHHCCCcCcCCchhhhc
Q 002031 485 FLVELGNDGKILGIQVCAYKDGEVIIDTSAGMLGRYDPRPVQPDSLFPVFSVTKGITAGMLHWLVDNGKLKLEENIANIW 564 (977)
Q Consensus 485 ~l~~~~~~~~~pG~svaVv~~g~~v~~~~~G~~~~~~~~~~t~~T~f~i~SiTK~~ta~~v~~lv~~G~l~ld~~v~~yl 564 (977)
.+++++++..+|| ++|+++|+++++++||+ ++++|+|.|+|+||+|||+++++|+|+|+|+||+||.+||
T Consensus 72 ~l~~~l~~~~~~g--v~V~~~G~iv~~~~~G~--------~~~~t~f~i~SvTK~~Ta~~i~~Lve~G~l~lddpv~~yl 141 (392)
T 2dcf_A 72 DLEQRLEQTYTDA--FLVLRGTEVVAEYYRAG--------FAPDDRHLLMAVSKSLCGTVVGALVDEGRIDPAQPVTEYV 141 (392)
T ss_dssp THHHHHHHTTEEE--EEEEETTEEEEEEECTT--------CCTTCCEECTTHHHHHHHHHHHHHHHTTSCCTTSBGGGTC
T ss_pred hHHHHHHhcCCCE--EEEEECCEEEEEeccCC--------CCCCCeeeeeeeHHHHHHHHHHHHHHCCCCCCcCcHHHhh
Confidence 3455555577887 67889999999999984 6899999999999999999999999999999999999999
Q ss_pred cccccCCCCCCcHHHHhcCcCCCCCCcCCCCCC------------CCcCCCC-HHHHHHHHHccCCCCCCCCceecccCc
Q 002031 565 PEFKSNGKDLIKVHHVLNHTSGLHNVSVDLSSE------------NPLLICD-WDECLNRIALSAPETEPGQEQLYHYLS 631 (977)
Q Consensus 565 P~~~~~~~~~iTir~LLsHtSGl~~~~~~~~~~------------~~~~~~~-~~~~~~~l~~~~~~~~pG~~~~Ysn~~ 631 (977)
|++....++.|||||||+||||++......... .+. ..+ .+++.+.+...++.+ ||+.|.|||.+
T Consensus 142 Pe~~~~~~~~iTir~LL~htSGl~~~~~~~~p~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~~~~~~~-PG~~~~Ysn~~ 219 (392)
T 2dcf_A 142 PELAGSVYDGPSVLQVLDMQISIDYNEDYVDPASEVQTHDRSAGWRTR-RHGDPADTYEFLTTLRGDG-STGEFQYCSAN 219 (392)
T ss_dssp GGGTTSTTSSCBHHHHHTTCBCCSCCCCSSCTTSHHHHHHHHHTSSCC-CTTCCSSHHHHHHTCCCCS-CBSSCCCCHHH
T ss_pred hhccCCCCCCCcHHHHHhcccCCCCccccCCcchHHHHHHhhcccccc-cccChHHHHHHHHhCcccC-CCceeEECChh
Confidence 999877778999999999999999642211000 000 000 456777888888888 99999999999
Q ss_pred HHHHHHHHHHHHhCCCHHHHHHHHcccccCCCCccCCCCCCCcccCcceecccCCccccccCCCCCCCCCCCCCCCcchh
Q 002031 632 FGWLCGGIIERASGKKFQEILEEGIIQPLSIDGELYIGIPPGVESRLASLTIDTDDLNKVSGINNRPDLRLPSSFQPDKI 711 (977)
Q Consensus 632 ~~~llg~iiE~vtG~~~~~~l~~~if~PLGm~~t~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~p~~~~p~~~~~~~~ 711 (977)
|. |||.|||++||++|++|++++||+||||++|.|...++ .
T Consensus 220 ~~-lLg~iie~vtG~~~~~~l~~~I~~PLGm~~t~~~~~d~--------------------------~------------ 260 (392)
T 2dcf_A 220 TD-VLAWIVERVTGLRYVEALSTYLWAKLDADRDATITVDT--------------------------T------------ 260 (392)
T ss_dssp HH-HHHHHHHHHHCSCHHHHHHHHTGGGTTCSSCCEECBCT--------------------------T------------
T ss_pred HH-HHHHHHHHHhCCCHHHHHHHHhhhhcCCCCcceeeeCC--------------------------C------------
Confidence 98 99999999999999999999999999999986642110 0
Q ss_pred hhhhhcccccccchhccccccCccceecCHHHHHHHHHHHHcCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccccchh
Q 002031 712 SQLAAITPAVFNMLNIRRAIIPAANGHCSARALARYYAALADGGVVPPPHSRLSKPPLGSHPHIPKFPSHETSKKQKGTK 791 (977)
Q Consensus 712 ~~~~~~~~~~~~~~~~~~~~~~agG~~sTa~Dlar~~~~ll~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 791 (977)
+...++||+++|++||+||+++++++|.+++++ =++
T Consensus 261 -----------------g~~~~~ggl~sT~~Dlar~~~~ll~~G~~~g~~---------------------------ll~ 296 (392)
T 2dcf_A 261 -----------------GFGFANGGVSCTARDLARVGRMMLDGGVAPGGR---------------------------VVS 296 (392)
T ss_dssp -----------------CCBCTTTCEEECHHHHHHHHHHHHTTTEETTEE---------------------------CSC
T ss_pred -----------------CCcccCceeecCHHHHHHHHHHHHcCCccCCEE---------------------------eCC
Confidence 123488999999999999999999999887653 245
Q ss_pred HHHHHHHhhccCCCCCCcccccCCCCCccccccCcchhhhhhhcccCCCCCCCccCCCCCCCCCCcccccccCCCccccc
Q 002031 792 KELLAALKNKTNNSEHGHKYTKDLEGGSHIRTASGDTYARLINIETSSSNTSTTDSISNTDEPQSSNVRKIFNNPRIHDA 871 (977)
Q Consensus 792 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 871 (977)
++.+++|....... .| ...+|..
T Consensus 297 ~~~~~~~~~~~~~~----~~-------------~~~~~~~---------------------------------------- 319 (392)
T 2dcf_A 297 EDWVRRVLAGGSHE----AM-------------TDKGFTN---------------------------------------- 319 (392)
T ss_dssp HHHHHHHHHCCCTT----TC-------------CCHHHHH----------------------------------------
T ss_pred HHHHHHHhccCCch----hc-------------ccccccC----------------------------------------
Confidence 56777773200000 00 0000000
Q ss_pred ccCCCCCCCCCCCCCccccceeecCCCCCCccccccCCccCcceeeecCCCeEEEEEeccCCCCCC-----hHHHHHHHH
Q 002031 872 FLGVGDYGDLALPNGRFGLGFKRYNTRDGSYIGFGHSGMGGSTGFCDVNNRFAIAVTLNKMSFGAT-----TGRIIHFVC 946 (977)
Q Consensus 872 ~~~~g~~~~~~~~~~~yGlG~~~~~~~~~~~~~~gH~G~~G~~~~~~P~~~~~ivvl~N~~~~~~~-----~~~~~~~v~ 946 (977)
..+...||+||++.. .+...|+|.|.+|+.+|++|+.+++||+++|...+.+. ...+.++|.
T Consensus 320 ----------~~~~~~YG~gw~~~~---~~~~~~~h~G~~G~~~~i~P~~~~~iv~lsn~~~~~~~~~~~~~~~~~~ai~ 386 (392)
T 2dcf_A 320 ----------TFPDGSYTRQWWCTG---NERGNVSGIGIHGQNLWLDPLTDSVIVKLSSWPDPDTEHWHRLQNGILLDVS 386 (392)
T ss_dssp ----------HCTTCEEETTEEECC---CTTCCEEEEETTTEEEEEEGGGTEEEEEEECCSSSSCHHHHHHHHHHHHHHH
T ss_pred ----------CCCCCCcCcceEecC---CCCCeEEEEccCCeEEEEECCCCEEEEEeCCCCCCCCccccHHHHHHHHHHH
Confidence 012358999999854 33456999999999999999999999999999876542 234556666
Q ss_pred HHh
Q 002031 947 SEL 949 (977)
Q Consensus 947 ~~l 949 (977)
++|
T Consensus 387 ~~l 389 (392)
T 2dcf_A 387 RAL 389 (392)
T ss_dssp HHT
T ss_pred HHH
Confidence 655
|
| >4gb7_A 6-aminohexanoate-dimer hydrolase; structural genomics, IDP05595, national institute of allergy and infectious diseases; HET: MSE; 1.60A {Bacillus anthracis} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.8e-42 Score=399.28 Aligned_cols=297 Identities=14% Similarity=0.150 Sum_probs=223.8
Q ss_pred HHHHHHHHhccCCCccceEEEEEecCeeEEEeeccccCCCCCCCCCCCCcceeecchHHHHHHHHHHHHHCCCcCcCCch
Q 002031 481 KLRDFLVELGNDGKILGIQVCAYKDGEVIIDTSAGMLGRYDPRPVQPDSLFPVFSVTKGITAGMLHWLVDNGKLKLEENI 560 (977)
Q Consensus 481 ~l~~~l~~~~~~~~~pG~svaVv~~g~~v~~~~~G~~~~~~~~~~t~~T~f~i~SiTK~~ta~~v~~lv~~G~l~ld~~v 560 (977)
.+++++++ ..+. ++.|+++|++|++++++ +++++|+|.++|+||+|||+++++|+|+|+|+|||||
T Consensus 100 ~l~~~l~~----~~t~--a~lV~k~GkIv~E~Y~~--------~~~~dt~~~i~SvtKs~ta~~i~~lve~G~l~ldd~v 165 (422)
T 4gb7_A 100 PLKELLDD----NKTD--AFVVVHNGQLVYERYFN--------GYNESEPHGMASLAKVFTGAIIQSLAEENRIDLEKTA 165 (422)
T ss_dssp EHHHHHHH----TTEE--EEEEEETTEEEEEEECT--------TCCTTSCEECGGGGHHHHHHHHHHHHHTTSSCTTSBH
T ss_pred cHHHHHHh----cCCC--EEEEEECCEEEEEeCCC--------CCCCCCeeeeeeccHHHHHHHHHHHHHcCCcccCcch
Confidence 35555554 3344 47889999999999885 6799999999999999999999999999999999999
Q ss_pred hhhccccccCCCCCCcHHHHhcCcCCCCCCcCCCCCC-----------------CCcCCCCHHHHHHHHHccCCCCCCCC
Q 002031 561 ANIWPEFKSNGKDLIKVHHVLNHTSGLHNVSVDLSSE-----------------NPLLICDWDECLNRIALSAPETEPGQ 623 (977)
Q Consensus 561 ~~ylP~~~~~~~~~iTir~LLsHtSGl~~~~~~~~~~-----------------~~~~~~~~~~~~~~l~~~~~~~~pG~ 623 (977)
++|+|++.....++|||||||+||||++......... .........+....+...++.++||+
T Consensus 166 ~~ylPe~~~~~~~~iTir~LL~htSGl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~PG~ 245 (422)
T 4gb7_A 166 DTYIKELKNTPFGKATLQQLMDMQVSVEYPTHGYEHPALENQDAQLYLASNILPRDKNYDGPMKIYDMLQEAKETAPPGS 245 (422)
T ss_dssp HHHCGGGTTSHHHHSBHHHHHTTCCEEECCCTTCCBTTBCHHHHHHHHHTTCSCCCTTCCSCSSHHHHHHTCEEEECTTS
T ss_pred hccCccccccccccchHhhhhhcccccccccccccCccccchhhhhhhhcccccccccccchHHHHHHHhhcccccCCCc
Confidence 9999999887777899999999999996432211100 00111223456677778888899999
Q ss_pred ceecccCcHHHHHHHHHHHHhCCCHHHHHHHHcccccCCCCccCCCCCCCcccCcceecccCCccccccCCCCCCCCCCC
Q 002031 624 EQLYHYLSFGWLCGGIIERASGKKFQEILEEGIIQPLSIDGELYIGIPPGVESRLASLTIDTDDLNKVSGINNRPDLRLP 703 (977)
Q Consensus 624 ~~~Ysn~~~~~llg~iiE~vtG~~~~~~l~~~if~PLGm~~t~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~p~~~~p 703 (977)
.|.|||.+|. +||.|||++||++|++|++++||+||||+++.+.....
T Consensus 246 ~~~Ys~~~~~-lLg~iie~vtG~~~~~~l~e~i~~PLgm~~~~~~~~~~------------------------------- 293 (422)
T 4gb7_A 246 VFSYNNGSTE-TLAWIIRTITGKSLAENVSERIWSQIGMEENAYYVTDE------------------------------- 293 (422)
T ss_dssp SCCCCHHHHH-HHHHHHHHHHSSCHHHHHHHHTTTTSCCSSCEEEEBCT-------------------------------
T ss_pred eeecccccHH-HHHHHHHHHHCCCHHHHhHHHHhcccCCccccccccCC-------------------------------
Confidence 9999999998 99999999999999999999999999999885521100
Q ss_pred CCCCcchhhhhhhcccccccchhccccccCccceecCHHHHHHHHHHHHcCCCCCCCCCCCCCCCCCCCCCCCCCCCccc
Q 002031 704 SSFQPDKISQLAAITPAVFNMLNIRRAIIPAANGHCSARALARYYAALADGGVVPPPHSRLSKPPLGSHPHIPKFPSHET 783 (977)
Q Consensus 704 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~agG~~sTa~Dlar~~~~ll~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 783 (977)
.+...++||+++|++|||||+++++++|.++++|.
T Consensus 294 ------------------------~g~~~~~ggl~sta~D~arfg~l~l~~G~~~g~qi--------------------- 328 (422)
T 4gb7_A 294 ------------------------TKIEQASAGLNATARDMARFGQLLLNNGEYNGKQI--------------------- 328 (422)
T ss_dssp ------------------------TSCBCTTTCEEECHHHHHHHHHHHHTTTEETTEES---------------------
T ss_pred ------------------------CCCcccccceecCHHHHHHHHHHHHcCCccCCeEe---------------------
Confidence 02234789999999999999999999999998851
Q ss_pred cccccchhHHHHHHHhhccCCCCCCcccccCCCCCccccccCcchhhhhhhcccCCCCCCCccCCCCCCCCCCccccccc
Q 002031 784 SKKQKGTKKELLAALKNKTNNSEHGHKYTKDLEGGSHIRTASGDTYARLINIETSSSNTSTTDSISNTDEPQSSNVRKIF 863 (977)
Q Consensus 784 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 863 (977)
++++.+++|.+ ++. .
T Consensus 329 ------l~~~~v~~~~~----------------------------------~~~-------------------~------ 343 (422)
T 4gb7_A 329 ------LPSSITEDIKN----------------------------------VQE-------------------G------ 343 (422)
T ss_dssp ------SCTHHHHHHHT----------------------------------CCT-------------------T------
T ss_pred ------cCHHHHHHHhc----------------------------------cCC-------------------C------
Confidence 12234444411 000 0
Q ss_pred CCCcccccccCCCCCCCCCCCCCccccceeecCCCCCCccccccCCccCcceeeecCCCeEEEEEeccCCCCCChHHH--
Q 002031 864 NNPRIHDAFLGVGDYGDLALPNGRFGLGFKRYNTRDGSYIGFGHSGMGGSTGFCDVNNRFAIAVTLNKMSFGATTGRI-- 941 (977)
Q Consensus 864 ~~~~~~~~~~~~g~~~~~~~~~~~yGlG~~~~~~~~~~~~~~gH~G~~G~~~~~~P~~~~~ivvl~N~~~~~~~~~~~-- 941 (977)
.... + .....+||+||++.. .+...|+|.|.+|+++|++|+.+++||+++|...+.+....+
T Consensus 344 ------~~~~--~-----~~~~~~YG~~ww~~~---~~~~~~~~~G~~Gq~i~vdP~~~lviV~lsn~~~~~~~~~~~~~ 407 (422)
T 4gb7_A 344 ------ELAI--G-----PGASISYHNQWWIPH---NEQGAFEVLGSYGQTLYIDPKAKMVIVHFSSNATPSNEIHSVYS 407 (422)
T ss_dssp ------SSBS--S-----TTCSCEEETTEEECC---CTTCCEEEEETTTEEEEEETTTTEEEEEEECCSSCCTTHHHHHH
T ss_pred ------Cccc--C-----CCCCCCCCcceeecC---CCCCeEEEEccCCeEEEEEecCCEEEEEeCCCCCCCchhhHHHH
Confidence 0000 0 012358999999854 344569999999999999999999999999998776654333
Q ss_pred --HHHHHHHh
Q 002031 942 --IHFVCSEL 949 (977)
Q Consensus 942 --~~~v~~~l 949 (977)
...|.+.|
T Consensus 408 ~~~~~Ia~~L 417 (422)
T 4gb7_A 408 NMYIDIAHHL 417 (422)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 33444444
|
| >3i7j_A Beta-lactamase MB2281C; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 2.20A {Mycobacterium bovis} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-40 Score=365.15 Aligned_cols=256 Identities=21% Similarity=0.291 Sum_probs=198.9
Q ss_pred HhccCCCccceEEEEEecCeeEEEeeccccCCCCCCCCCCCCcceeecchHHHHHHHHHHHHHCCCcCcCCchhhhcccc
Q 002031 488 ELGNDGKILGIQVCAYKDGEVIIDTSAGMLGRYDPRPVQPDSLFPVFSVTKGITAGMLHWLVDNGKLKLEENIANIWPEF 567 (977)
Q Consensus 488 ~~~~~~~~pG~svaVv~~g~~v~~~~~G~~~~~~~~~~t~~T~f~i~SiTK~~ta~~v~~lv~~G~l~ld~~v~~ylP~~ 567 (977)
+.+++..+||++++|+++|+++++ +| +++|+|+++|+||+|||+++++|+++|+|+||+||.+
T Consensus 5 ~~~~~~~vpg~s~~vv~~~~~v~~--~g----------~~~t~~~i~S~tK~~ta~~i~~lv~~G~l~ld~~v~~----- 67 (280)
T 3i7j_A 5 EVLGGWPVPAAAAAVIGPAGVLAT--HG----------DTARVFALASVTKPLVARAAQVAVEEGVVNLDTPAGP----- 67 (280)
T ss_dssp GGGGGSSSSCEEEEEEETTEEEEE--ES----------CTTSCEECGGGHHHHHHHHHHHHHHHTSSCTTSBCSS-----
T ss_pred HHHHhCCCCcEEEEEEECCEEEEe--ec----------CCCCeEechhhHHHHHHHHHHHHHHcCCCCCCCcCCC-----
Confidence 567789999999999999997764 55 8899999999999999999999999999999999985
Q ss_pred ccCCCCCCcHHHHhcCcCCCCCCcCCCCCCCCcCCCCHHHHHHHHHccCCCCCCCCceecccCcHHHHHHHHHHHHhCCC
Q 002031 568 KSNGKDLIKVHHVLNHTSGLHNVSVDLSSENPLLICDWDECLNRIALSAPETEPGQEQLYHYLSFGWLCGGIIERASGKK 647 (977)
Q Consensus 568 ~~~~~~~iTir~LLsHtSGl~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~pG~~~~Ysn~~~~~llg~iiE~vtG~~ 647 (977)
+.|||||||+||||++... .++.++||+.|.|||.+|. +||.|||+++|++
T Consensus 68 -----~~iTi~~LL~htsGl~~~~-----------------------~~~~~~pG~~~~Ysn~~~~-llg~iie~~tg~~ 118 (280)
T 3i7j_A 68 -----PGSTVRHLLAHTSGLAMHS-----------------------DQALARPGTRRMYSNYGFT-VLAESVQRESGIE 118 (280)
T ss_dssp -----TTCBHHHHHTTCSCBCSSS-----------------------SCBCSCTTTCCCCCHHHHH-HHHHHHHHHHTSC
T ss_pred -----CCCcHHHHHhCCCCCCCCC-----------------------CCccCCCCCceeECcHHHH-HHHHHHHHHhCCC
Confidence 5799999999999999631 2578899999999999999 9999999999999
Q ss_pred HHHHHHHHcccccCCCCccCCCCCCCcccCcceecccCCccccccCCCCCCCCCCCCCCCcchhhhhhhcccccccchhc
Q 002031 648 FQEILEEGIIQPLSIDGELYIGIPPGVESRLASLTIDTDDLNKVSGINNRPDLRLPSSFQPDKISQLAAITPAVFNMLNI 727 (977)
Q Consensus 648 ~~~~l~~~if~PLGm~~t~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~p~~~~p~~~~~~~~~~~~~~~~~~~~~~~~ 727 (977)
|+++++++||+||||++|.|.+.
T Consensus 119 ~~~~~~~~i~~PLgm~~t~~~~~--------------------------------------------------------- 141 (280)
T 3i7j_A 119 FGRYLTEAVCEPLGMVTTRLDGG--------------------------------------------------------- 141 (280)
T ss_dssp HHHHHHHHTHHHHTCTTCEECSG---------------------------------------------------------
T ss_pred HHHHHHHHhhcccCCCCcccCCC---------------------------------------------------------
Confidence 99999999999999999866210
Q ss_pred cccccCccceecCHHHHHHHHHHHHcCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccccchhHHHHHHHhhccCCCCC
Q 002031 728 RRAIIPAANGHCSARALARYYAALADGGVVPPPHSRLSKPPLGSHPHIPKFPSHETSKKQKGTKKELLAALKNKTNNSEH 807 (977)
Q Consensus 728 ~~~~~~agG~~sTa~Dlar~~~~ll~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 807 (977)
...+++|+++|++||+||+++++++..++ ++.+++|..
T Consensus 142 --~~~~~~gl~sta~Dla~~~~~ll~~~ll~---------------------------------~~~~~~~~~------- 179 (280)
T 3i7j_A 142 --PAAAGFGATSTVADLAVFAGDLLRPSTVS---------------------------------AQMHADATT------- 179 (280)
T ss_dssp --GGGTTTCEEECHHHHHHHHHHHHSCCSSC---------------------------------HHHHHHHTS-------
T ss_pred --CCCCCceeeECHHHHHHHHHHHhcCCCCC---------------------------------HHHHHHHhc-------
Confidence 01367899999999999999999855543 336666621
Q ss_pred CcccccCCCCCccccccCcchhhhhhhcccCCCCCCCccCCCCCCCCCCcccccccCCCcccccccCCCCCCCCCCCCCc
Q 002031 808 GHKYTKDLEGGSHIRTASGDTYARLINIETSSSNTSTTDSISNTDEPQSSNVRKIFNNPRIHDAFLGVGDYGDLALPNGR 887 (977)
Q Consensus 808 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 887 (977)
++. . ..... . .+.| ......
T Consensus 180 ---------------------------~~~-----------~--------~~~~~------~---~~~~-----~~~~~~ 199 (280)
T 3i7j_A 180 ---------------------------VQF-----------P--------GLDGV------L---PGYG-----VQRPND 199 (280)
T ss_dssp ---------------------------CSS-----------T--------TCCEE------E---TTTE-----EESSCC
T ss_pred ---------------------------ccc-----------C--------Ccccc------c---cccc-----cCCCCc
Confidence 000 0 00000 0 0000 012358
Q ss_pred cccceeecCCCC-------CCccccccCCccCcceeeecCCCeEEEEEeccCCCCCChHHHHHHHHHHh
Q 002031 888 FGLGFKRYNTRD-------GSYIGFGHSGMGGSTGFCDVNNRFAIAVTLNKMSFGATTGRIIHFVCSEL 949 (977)
Q Consensus 888 yGlG~~~~~~~~-------~~~~~~gH~G~~G~~~~~~P~~~~~ivvl~N~~~~~~~~~~~~~~v~~~l 949 (977)
||+||++..... .+...|+|+|.+|++.|++|+.+++||+++|+.... ....++..+.+++
T Consensus 200 yGlGw~~~~~~~~~~~~~~~~~~~~gh~G~~g~~~~~~P~~~~~vv~ltN~~~~~-~~~~~~~~l~~~v 267 (280)
T 3i7j_A 200 WGLGFEIRNSKSPHWTGECNSTRTFGHFGQSGGFIWVDPKADLALVVLTARDFGD-WALDLWPAISDAV 267 (280)
T ss_dssp BCSSSEECTTCSSCSSCTTSCTTCEEEEETTTEEEEEETTTTEEEEEEESSCSST-THHHHHHHHHHHH
T ss_pred eeeeEEeccCCCCcccccCCCCCEEEecCcCCeEEEEEeCCCEEEEEEECCCCCc-hhHHHHHHHHHHH
Confidence 999999875321 244679999999999999999999999999986544 3344444444433
|
| >2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A | Back alignment and structure |
|---|
Probab=99.87 E-value=2e-22 Score=229.26 Aligned_cols=226 Identities=17% Similarity=0.181 Sum_probs=115.2
Q ss_pred HHHHHHHHHHHHHHHhcChHHH-HHHHHHhcCCCCCCHHHHHHHHHHHhCCCCCCHHHHHHHHHHHhCCChhhcccccCc
Q 002031 45 RAHERNAKRVLNLIIKLEGLWV-KLGQYLSTRADVLPEPYISLLKQLQDSLPPRPVQEVSQTIEREFGESMGGMFMDFVE 123 (977)
Q Consensus 45 ~~~~~~a~~l~~~l~~lgg~~i-K~GQ~ls~r~dllp~~~~~~L~~Lqd~~p~~~~~~v~~~l~~elg~~~~~~f~~~d~ 123 (977)
+.+++.|+++.+.+.++++..+ ++.|.+...++..+ +++.++++|||.+|+.+++.+.+.++.+++.+..+.|..|+.
T Consensus 16 ~~~~~r~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~-~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 94 (365)
T 2y7j_A 16 NKERRRARREIRHLPNLNREQRRAFIRSLRDDPSQSA-NLLAEAKKLNDAQPKGTENLYFQSMGPEDELPDWAAAKEFYQ 94 (365)
T ss_dssp -------------------------------------------------------------------CBCHHHHHHHHHH
T ss_pred hHHHHHHHHHHhcCccchhcccccccccccCCCchhH-HHHHHHHhhhhcCCCCccccccccCCchhhcccchhhhhhhh
Confidence 4567789999999999999988 88999888776554 566789999999999999999999999999888888887776
Q ss_pred -----cccccccccEEEEEEec-CCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccC
Q 002031 124 -----TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELD 197 (977)
Q Consensus 124 -----~piasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld 197 (977)
++||+|++|+||+|+++ +|+.||||+++++.......++. ++.+ .
T Consensus 95 ~y~~~~~lg~G~~g~Vy~a~~~~~g~~vavK~~~~~~~~~~~~~~~-----------------------~~~~------~ 145 (365)
T 2y7j_A 95 KYDPKDVIGRGVSSVVRRCVHRATGHEFAVKIMEVTAERLSPEQLE-----------------------EVRE------A 145 (365)
T ss_dssp HEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEETTSSCCCHHHHH-----------------------HHHH------H
T ss_pred hcccceEEecCCCEEEEEEEECCCCcEEEEEEEEccccccCHHHHH-----------------------HHHH------H
Confidence 89999999999999985 79999999999876543333322 1111 1
Q ss_pred cHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceee-e-cCCceEEeeccCCCCCCChHHHHhcCCCHHHHHHHHH
Q 002031 198 FNSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVI-Q-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEIT 275 (977)
Q Consensus 198 ~~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~-~-~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~ 275 (977)
+.+|...+.++.. ++.+..+..+ . ++..+|||||++|.+|.++.. ....++...+...+.
T Consensus 146 ~~~E~~~l~~l~~-----------------hp~iv~~~~~~~~~~~~~lv~e~~~g~~L~~~l~-~~~~l~~~~~~~i~~ 207 (365)
T 2y7j_A 146 TRRETHILRQVAG-----------------HPHIITLIDSYESSSFMFLVFDLMRKGELFDYLT-EKVALSEKETRSIMR 207 (365)
T ss_dssp HHHHHHHHHHHTT-----------------CTTBCCEEEEEEBSSEEEEEECCCTTCBHHHHHH-HHSSCCHHHHHHHHH
T ss_pred HHHHHHHHHHhcC-----------------CCCEeEEEEEEeeCCEEEEEEEeCCCCcHHHHHH-hcCCCCHHHHHHHHH
Confidence 3345555544421 1222222222 2 567799999999999988754 233466655555555
Q ss_pred HHH--HHHHHhcCccccCCCCCCeEEccCCCCceEEEecccccccCH
Q 002031 276 RAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 320 (977)
Q Consensus 276 ~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 320 (977)
+++ +..+|..|++|+||||+|||++.+ ++++|+|||++..++.
T Consensus 208 qi~~~L~~LH~~gi~H~Dlkp~NIl~~~~--~~ikl~DfG~~~~~~~ 252 (365)
T 2y7j_A 208 SLLEAVSFLHANNIVHRDLKPENILLDDN--MQIRLSDFGFSCHLEP 252 (365)
T ss_dssp HHHHHHHHHHHTTEECSCCSGGGEEECTT--CCEEECCCTTCEECCT
T ss_pred HHHHHHHHHHhCCeecCCCCHHHEEECCC--CCEEEEecCcccccCC
Confidence 544 788999999999999999999865 8999999999988764
|
| >3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B | Back alignment and structure |
|---|
Probab=99.73 E-value=2.1e-18 Score=205.23 Aligned_cols=200 Identities=15% Similarity=0.128 Sum_probs=136.8
Q ss_pred HHHHHhcCCCCCCH----HHHHHHH---------------------HHHhCCCCCCHHHHHHH----HHHHhCCChhhcc
Q 002031 68 LGQYLSTRADVLPE----PYISLLK---------------------QLQDSLPPRPVQEVSQT----IEREFGESMGGMF 118 (977)
Q Consensus 68 ~GQ~ls~r~dllp~----~~~~~L~---------------------~Lqd~~p~~~~~~v~~~----l~~elg~~~~~~f 118 (977)
+||+++|++|++|. +.+++++ +++|++++++.+.+.++ .+..++..+.+++
T Consensus 72 ~~~f~~t~~~~~~~~~~~~~i~e~~~~~~~~~~~~~~~l~~~~~~~~~~d~~~~~~~~~v~~v~~~~~~~l~~~~~~~~~ 151 (543)
T 3c4z_A 72 FQQFLRTHEQHGPALQLWKDIEDYDTADDALRPQKAQALRAAYLEPQAQLFCSFLDAETVARARAGAGDGLFQPLLRAVL 151 (543)
T ss_dssp HHHHHHHCGGGHHHHHHHHHHHHHHTSCTTTHHHHHHHHHHHHTSTTCTTCCTTSCHHHHHHHHCC---CTTHHHHHHHH
T ss_pred HHHHHhcCCchhHHHHHHhhhhhhccCchhhHHHHHHHHHHHhhCchhhhhhccCCHHHHhhhhcCCCchhhHHHHHHHH
Confidence 48999999999999 8888888 88999999998887776 3333333334444
Q ss_pred cccCc----------------------------------cccccccccEEEEEEec-CCCEEEEEEecCChhhhhHhhHH
Q 002031 119 MDFVE----------------------------------TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLK 163 (977)
Q Consensus 119 ~~~d~----------------------------------~piasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~ 163 (977)
..++. +.||+|++|+||+|+.+ +|+.||||+.+.......
T Consensus 152 ~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~LG~G~fG~Vy~a~~~~tg~~vAiK~l~k~~~~~~----- 226 (543)
T 3c4z_A 152 AHLGQAPFQEFLDSLYFLRFLQWKWLEAQPMGEDWFLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKR----- 226 (543)
T ss_dssp HHHTTHHHHHHHTSHHHHHHHHHHHHHTSCCCGGGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEHHHHHHT-----
T ss_pred HhhhcCchHhhhhhhhhhhhhhhhhhhcccCChhheEEEEEEeeCCCeEEEEEEECCCCcEEEEEEEEhHHhhhh-----
Confidence 33333 34999999999999985 799999998753211000
Q ss_pred HHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCcHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeee-cCCc
Q 002031 164 NAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSET 242 (977)
Q Consensus 164 ~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~ 242 (977)
...-.+.+|.+.+.++.+. .-+.+-..+. ....
T Consensus 227 -----------------------------~~~~~~~~E~~iL~~l~hp-----------------~Iv~l~~~~~~~~~l 260 (543)
T 3c4z_A 227 -----------------------------KGYQGAMVEKKILAKVHSR-----------------FIVSLAYAFETKTDL 260 (543)
T ss_dssp -----------------------------TCHHHHHHHHHHHHHCCCT-----------------TBCCEEEEEECSSEE
T ss_pred -----------------------------HHHHHHHHHHHHHHhcCCC-----------------CEeeEEEEEeeCCEE
Confidence 0111344566665554220 1111212222 4556
Q ss_pred eEEeeccCCCCCCChHHHH---hcCCCHHHHHHHHHHHH--HHHHHhcCccccCCCCCCeEEccCCCCceEEEecccccc
Q 002031 243 VLILEFMDGIRLNDCESLE---AFGVNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKK 317 (977)
Q Consensus 243 vLVmE~i~G~~L~~~~~~~---~~~~~~~~l~~~l~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~ 317 (977)
+|||||++|++|.+..... ...++...+...+.+++ +..+|..|++||||||+|||++.+ |.++|+|||++..
T Consensus 261 ~lVmE~~~gg~L~~~l~~~~~~~~~l~e~~~~~~~~qi~~aL~~LH~~gIvHrDLKP~NILl~~~--g~vkL~DFGla~~ 338 (543)
T 3c4z_A 261 CLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQRNIIYRDLKPENVLLDDD--GNVRISDLGLAVE 338 (543)
T ss_dssp EEEECCCTTCBHHHHHHTSSTTSCSCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTT--SCEEECCCTTCEE
T ss_pred EEEEEeccCCCHHHHHHHhhcccccccHHHHHHHHHHHHHHHHHHHHcCCcccCCChHHEEEeCC--CCEEEeecceeee
Confidence 8999999999987653211 12355555555555544 888999999999999999999865 8999999999987
Q ss_pred cCH
Q 002031 318 LSS 320 (977)
Q Consensus 318 l~~ 320 (977)
+..
T Consensus 339 ~~~ 341 (543)
T 3c4z_A 339 LKA 341 (543)
T ss_dssp CCT
T ss_pred ccC
Confidence 654
|
| >4b9d_A Serine/threonine-protein kinase NEK1; transferase, inhibitor; HET: CK7; 1.90A {Homo sapiens} PDB: 4apc_A* | Back alignment and structure |
|---|
Probab=99.73 E-value=5.7e-18 Score=189.90 Aligned_cols=145 Identities=15% Similarity=0.183 Sum_probs=97.6
Q ss_pred cccccccccEEEEEEe-cCCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCcHHHH
Q 002031 124 TPLATASIAQVHRATL-VDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (977)
Q Consensus 124 ~piasaSigqV~~A~l-~~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea 202 (977)
+.||.|+||.||+|+. .+|+.||||+.+...... .+. -.+.+|+
T Consensus 30 ~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~--~~~---------------------------------~~~~~E~ 74 (350)
T 4b9d_A 30 QKIGEGSFGKAILVKSTEDGRQYVIKEINISRMSS--KER---------------------------------EESRREV 74 (350)
T ss_dssp EEC------CEEEEEETTTCCEEEEEEEECTTSCH--HHH---------------------------------HHHHHHH
T ss_pred EEEecCCCeEEEEEEECCCCCEEEEEEEehHHCCH--HHH---------------------------------HHHHHHH
Confidence 6799999999999997 479999999986432110 000 0245677
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeee-cCCceEEeeccCCCCCCChHHHHhc-CCCHHHHHHHHHHHH--
Q 002031 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAF-GVNKQKVVEEITRAY-- 278 (977)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLVmE~i~G~~L~~~~~~~~~-~~~~~~l~~~l~~~~-- 278 (977)
+.+.++.+ ..-|.+=.++. ....+||||||+|++|.++...... .++...+...+.+++
T Consensus 75 ~il~~l~H-----------------pnIV~~~~~~~~~~~~yiVmEy~~gg~L~~~i~~~~~~~~~e~~~~~~~~qi~~a 137 (350)
T 4b9d_A 75 AVLANMKH-----------------PNIVQYRESFEENGSLYIVMDYCEGGDLFKRINAQKGVLFQEDQILDWFVQICLA 137 (350)
T ss_dssp HHHHHCCC-----------------TTBCCEEEEEEETTEEEEEEECCTTCBHHHHHHHTTTCCCCHHHHHHHHHHHHHH
T ss_pred HHHHHCCC-----------------CCCCcEEEEEEECCEEEEEEeCCCCCcHHHHHHHcCCCCCCHHHHHHHHHHHHHH
Confidence 77766532 11233333343 4556899999999999887543222 245555555555554
Q ss_pred HHHHHhcCccccCCCCCCeEEccCCCCceEEEecccccccCHHH
Q 002031 279 AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSSSM 322 (977)
Q Consensus 279 l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~~~ 322 (977)
+..+|..||+||||||+|||++.+ |.++|+|||+++.+....
T Consensus 138 L~ylH~~~IiHRDlKp~NILl~~~--g~vKl~DFGla~~~~~~~ 179 (350)
T 4b9d_A 138 LKHVHDRKILHRDIKSQNIFLTKD--GTVQLGDFGIARVLNSTV 179 (350)
T ss_dssp HHHHHHTTCEETTCCGGGEEECTT--CCEEECSTTEESCCCHHH
T ss_pred HHHHHHCCeeeccCCHHHEEECCC--CCEEEcccccceeecCCc
Confidence 889999999999999999999865 899999999999987643
|
| >4fih_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP; 1.97A {Homo sapiens} PDB: 4fig_A* 4fif_A* 4fii_A* 4fij_A* | Back alignment and structure |
|---|
Probab=99.73 E-value=3.8e-18 Score=191.08 Aligned_cols=147 Identities=20% Similarity=0.232 Sum_probs=107.3
Q ss_pred hhhcccccCccccccccccEEEEEEec-CCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhc
Q 002031 114 MGGMFMDFVETPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEA 192 (977)
Q Consensus 114 ~~~~f~~~d~~piasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l 192 (977)
+.+.|+.+ +.||.|+||.||+|+.+ +|+.||||+....-..
T Consensus 72 p~~~y~~~--~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~------------------------------------ 113 (346)
T 4fih_A 72 PRSYLDNF--IKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQ------------------------------------ 113 (346)
T ss_dssp GGGTEEEE--EEEEECSSCEEEEEEETTTCCEEEEEEEEGGGCS------------------------------------
T ss_pred hhHhcEEe--EEeecCcCeEEEEEEECCCCCEEEEEEEecCchh------------------------------------
Confidence 34556555 45999999999999985 7999999987421000
Q ss_pred ccccCcHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeee-cCCceEEeeccCCCCCCChHHHHhcCCCHHHHH
Q 002031 193 PKELDFNSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVV 271 (977)
Q Consensus 193 ~~Eld~~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~ 271 (977)
..-.+.+|++.+..+.+ ..-|.+=.++. ....+|||||++|++|.++. ....++...+.
T Consensus 114 -~~~~~~~Ei~il~~l~H-----------------pnIV~l~~~~~~~~~~~ivmEy~~gg~L~~~l--~~~~l~e~~~~ 173 (346)
T 4fih_A 114 -RRELLFNEVVIMRDYQH-----------------ENVVEMYNSYLVGDELWVVMEFLEGGALTDIV--THTRMNEEQIA 173 (346)
T ss_dssp -SGGGGHHHHHHHHHCCC-----------------TTBCCEEEEEEETTEEEEEECCCTTEEHHHHH--HHSCCCHHHHH
T ss_pred -HHHHHHHHHHHHHhCCC-----------------CCCCcEEEEEEECCEEEEEEeCCCCCcHHHHH--HcCCCCHHHHH
Confidence 01125567776666532 11233333343 45678999999999998864 45567777777
Q ss_pred HHHHHHH--HHHHHhcCccccCCCCCCeEEccCCCCceEEEecccccccCH
Q 002031 272 EEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 320 (977)
Q Consensus 272 ~~l~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 320 (977)
..+.+++ +..+|..||+||||||+|||++.+ |.++|+|||+++.+..
T Consensus 174 ~~~~qi~~aL~ylH~~~IiHRDlKp~NILl~~~--g~vKl~DFGla~~~~~ 222 (346)
T 4fih_A 174 AVCLAVLQALSVLHAQGVIHRDIKSDSILLTHD--GRVKLSDFGFCAQVSK 222 (346)
T ss_dssp HHHHHHHHHHHHHHHTTEECCCCSGGGEEECTT--CCEEECCCTTCEECCS
T ss_pred HHHHHHHHHHHHHHHCCcccccCCHHHEEECCC--CCEEEecCcCceecCC
Confidence 7666655 889999999999999999999865 8999999999988754
|
| >4fie_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP ANP; 3.11A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.72 E-value=9.2e-18 Score=192.59 Aligned_cols=147 Identities=20% Similarity=0.232 Sum_probs=107.1
Q ss_pred hhhcccccCccccccccccEEEEEEec-CCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhc
Q 002031 114 MGGMFMDFVETPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEA 192 (977)
Q Consensus 114 ~~~~f~~~d~~piasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l 192 (977)
..+.|+.+ +.||.|+||.||+|+.+ +|+.||||+....-..
T Consensus 149 p~~~y~~~--~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~------------------------------------ 190 (423)
T 4fie_A 149 PRSYLDNF--IKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQ------------------------------------ 190 (423)
T ss_dssp GGGTEEEE--EEEEECSSCEEEEEEETTTCCEEEEEEEESTTCS------------------------------------
T ss_pred hhHhcEee--eEeccCcCcEEEEEEECCCCCEEEEEEEeccchh------------------------------------
Confidence 34455554 46999999999999984 7999999987532110
Q ss_pred ccccCcHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeee-cCCceEEeeccCCCCCCChHHHHhcCCCHHHHH
Q 002031 193 PKELDFNSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVV 271 (977)
Q Consensus 193 ~~Eld~~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~ 271 (977)
..-.+.+|++.+..+.+ ...|.+=.++. ....+||||||+|++|.++. ....++...+.
T Consensus 191 -~~~~~~~Ei~il~~l~H-----------------pnIV~l~~~~~~~~~~~iVmEy~~gG~L~~~i--~~~~l~e~~~~ 250 (423)
T 4fie_A 191 -RRELLFNEVVIMRDYQH-----------------ENVVEMYNSYLVGDELWVVMEFLEGGALTDIV--THTRMNEEQIA 250 (423)
T ss_dssp -SGGGHHHHHHHHHHCCC-----------------TTBCCEEEEEEETTEEEEEEECCTTEEHHHHH--HHSCCCHHHHH
T ss_pred -HHHHHHHHHHHHHhCCC-----------------CCCCceEEEEEECCEEEEEEeCCCCCcHHHHH--hccCCCHHHHH
Confidence 00124567666665532 11233333343 45678999999999998874 45567777777
Q ss_pred HHHHHHH--HHHHHhcCccccCCCCCCeEEccCCCCceEEEecccccccCH
Q 002031 272 EEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 320 (977)
Q Consensus 272 ~~l~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 320 (977)
..+.+++ +..+|..||+||||||+|||++.+ |.++|+|||+++.+..
T Consensus 251 ~~~~qil~aL~ylH~~~IiHRDiKp~NILl~~~--g~vKl~DFGla~~~~~ 299 (423)
T 4fie_A 251 AVCLAVLQALSVLHAQGVIHRDIKSDSILLTHD--GRVKLSDFGFCAQVSK 299 (423)
T ss_dssp HHHHHHHHHHHHHHHTTEECCCCSTTTEEECTT--CCEEECCCTTCEECCS
T ss_pred HHHHHHHHHHHHHHHCCeecccCCHHHEEEcCC--CCEEEecCccceECCC
Confidence 7666665 889999999999999999999865 8999999999988754
|
| >4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A* | Back alignment and structure |
|---|
Probab=99.68 E-value=2.6e-17 Score=183.66 Aligned_cols=136 Identities=20% Similarity=0.205 Sum_probs=96.2
Q ss_pred cccccccccEEEEEEec-CCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCcHHHH
Q 002031 124 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (977)
Q Consensus 124 ~piasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea 202 (977)
+.||.|+||.||+|+.+ +|+.||||+.+.... ..+|+
T Consensus 64 ~~lG~G~fG~Vy~a~~~~~g~~vAiK~i~~~~~------------------------------------------~~~E~ 101 (336)
T 4g3f_A 64 PRVGRGSFGEVHRMKDKQTGFQCAVKKVRLEVF------------------------------------------RVEEL 101 (336)
T ss_dssp EEEEEETTEEEEEEEETTTCCEEEEEEEETTTC------------------------------------------CTHHH
T ss_pred cEeccCCCeEEEEEEECCCCCEEEEEEECHHHh------------------------------------------HHHHH
Confidence 46999999999999974 799999998753210 12344
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeee-cCCceEEeeccCCCCCCChHHHHhcCCCHHHHHHHHHHHH--H
Q 002031 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--A 279 (977)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~--l 279 (977)
..+.++.+ ..-|.+=.++. ....+||||||+|++|.++.. ....++...+...+.+++ +
T Consensus 102 ~il~~l~H-----------------pnIV~l~~~~~~~~~~~ivmEy~~gg~L~~~l~-~~~~l~e~~~~~~~~qi~~aL 163 (336)
T 4g3f_A 102 VACAGLSS-----------------PRIVPLYGAVREGPWVNIFMELLEGGSLGQLIK-QMGCLPEDRALYYLGQALEGL 163 (336)
T ss_dssp HTTTTCCC-----------------TTBCCEEEEEEETTEEEEEECCCTTCBHHHHHH-HHSSCCHHHHHHHHHHHHHHH
T ss_pred HHHHhCCC-----------------CCCCcEEEEEEECCEEEEEEeccCCCcHHHHHH-HcCCCCHHHHHHHHHHHHHHH
Confidence 43333211 11122223333 445689999999999988754 223467777666666655 8
Q ss_pred HHHHhcCccccCCCCCCeEEccCCCC-ceEEEecccccccCHH
Q 002031 280 HQIYVDGFFNGDPHPGNFLVSKDPPH-RPILLDFGLTKKLSSS 321 (977)
Q Consensus 280 ~~i~~~G~~H~D~hPgNIlv~~~~~g-~i~LiDFG~~~~l~~~ 321 (977)
..+|..||+||||||+|||++.+ | +++|+|||+++.+...
T Consensus 164 ~ylH~~~IiHRDlKp~NILl~~~--g~~vKl~DFGla~~~~~~ 204 (336)
T 4g3f_A 164 EYLHTRRILHGDVKADNVLLSSD--GSRAALCDFGHALCLQPD 204 (336)
T ss_dssp HHHHTTTEECSCCCGGGEEECTT--SCCEEECCCTTCEEC---
T ss_pred HHHHHCCceecccCHHHEEEeCC--CCEEEEeeCCCCeEccCC
Confidence 89999999999999999999865 5 6999999999988653
|
| >4aw0_A HPDK1, 3-phosphoinositide-dependent protein kinase 1; transferase, allosteric regulation, allosteric site, phosphorylation, AGC protein kinase; HET: SEP ATP MJF; 1.43A {Homo sapiens} PDB: 3hrc_A* 3hrf_A* 4a06_A* 4a07_A* 3rcj_A* 4aw1_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* 1uu3_A* ... | Back alignment and structure |
|---|
Probab=99.68 E-value=3.2e-17 Score=180.80 Aligned_cols=144 Identities=17% Similarity=0.135 Sum_probs=101.0
Q ss_pred cccccccccEEEEEEe-cCCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCcHHHH
Q 002031 124 TPLATASIAQVHRATL-VDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (977)
Q Consensus 124 ~piasaSigqV~~A~l-~~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea 202 (977)
+.||+|+||+||+|+. .+|+.||||+...... ..+ . ..-.+.+|.
T Consensus 38 ~~lG~G~fg~V~~a~~~~~~~~~AiK~i~k~~~---~~~-~------------------------------~~~~~~~E~ 83 (311)
T 4aw0_A 38 KILGEGSFSTVVLARELATSREYAIKILEKRHI---IKE-N------------------------------KVPYVTRER 83 (311)
T ss_dssp EEEEEETTEEEEEEEETTTCCEEEEEEEEHHHH---HHT-T------------------------------CHHHHHHHH
T ss_pred EEEecccCeEEEEEEECCCCCEEEEEEEEHHHC---CCH-H------------------------------HHHHHHHHH
Confidence 6799999999999997 4899999999753210 000 0 001244566
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeee-cCCceEEeeccCCCCCCChHHHHhcCCCHHHHHHHHHHHH--H
Q 002031 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--A 279 (977)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~--l 279 (977)
+.+.++.+ ..-|.+=.++. ...-+|||||++|++|.++.. +...++...+...+.+++ +
T Consensus 84 ~il~~l~H-----------------pnIv~l~~~~~~~~~~yivmEy~~gG~L~~~i~-~~~~l~e~~~~~~~~qi~~al 145 (311)
T 4aw0_A 84 DVMSRLDH-----------------PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIR-KIGSFDETCTRFYTAEIVSAL 145 (311)
T ss_dssp HHHTTCCC-----------------TTBCCEEEEEECSSEEEEEECCCTTEEHHHHHH-HHSSCCHHHHHHHHHHHHHHH
T ss_pred HHHHhCCC-----------------CCCCeEEEEEEeCCEEEEEEecCCCCCHHHHHH-HcCCCCHHHHHHHHHHHHHHH
Confidence 55544421 11223333343 455689999999999988753 233566666666666655 8
Q ss_pred HHHHhcCccccCCCCCCeEEccCCCCceEEEecccccccCHH
Q 002031 280 HQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSSS 321 (977)
Q Consensus 280 ~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~~ 321 (977)
..+|..||+||||||+|||++.+ |.++|+|||+++.++.+
T Consensus 146 ~ylH~~~IiHRDlKPeNILl~~~--g~vKl~DFGla~~~~~~ 185 (311)
T 4aw0_A 146 EYLHGKGIIHRDLKPENILLNED--MHIQITDFGTAKVLSPE 185 (311)
T ss_dssp HHHHHTTEECSCCSGGGEEECTT--SCEEECCCTTCEECCTT
T ss_pred HHHHHCCCccCCCCHHHeEEcCC--CCEEEEEcCCceecCCC
Confidence 89999999999999999999865 89999999999987643
|
| >3omv_A RAF proto-oncogene serine/threonine-protein kinas; serine/threonine-protein kinase, transferase; HET: SM5; 4.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.68 E-value=4.8e-17 Score=179.63 Aligned_cols=141 Identities=15% Similarity=0.173 Sum_probs=97.9
Q ss_pred cccccccccEEEEEEecCCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCcHHHHH
Q 002031 124 TPLATASIAQVHRATLVDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEAE 203 (977)
Q Consensus 124 ~piasaSigqV~~A~l~~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea~ 203 (977)
+.||+|+||.||+|+++ ..||||+.+...... .+ . -.|.+|++
T Consensus 42 ~~iG~G~fG~Vy~~~~~--~~vAvK~~~~~~~~~--~~-----------------------~----------~~f~~E~~ 84 (307)
T 3omv_A 42 TRIGSGSFGTVYKGKWH--GDVAVKILKVVDPTP--EQ-----------------------F----------QAFRNEVA 84 (307)
T ss_dssp EECCCCSSSEEEEEESS--SEEEEEECCCSSCCH--HH-----------------------H----------HHHHHHHH
T ss_pred eEEeeCCCcEEEEEEEC--CcEEEEEEEecCCCH--HH-----------------------H----------HHHHHHHH
Confidence 67999999999999974 369999976321100 00 0 03566777
Q ss_pred HHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeeecCCceEEeeccCCCCCCChHHHHhcCCCHHHHHHHHHHHH--HHH
Q 002031 204 NTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQSSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--AHQ 281 (977)
Q Consensus 204 n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~--l~~ 281 (977)
.+.+++| ..-|.+-.+......+|||||++|++|.+........++...+...+.++. +..
T Consensus 85 il~~l~H-----------------pNIV~l~g~~~~~~~~iVmEy~~gGsL~~~l~~~~~~l~~~~~~~i~~qia~gL~y 147 (307)
T 3omv_A 85 VLRKTRH-----------------VNILLFMGYMTKDNLAIVTQWCEGSSLYKHLHVQETKFQMFQLIDIARQTAQGMDY 147 (307)
T ss_dssp HHTTCCC-----------------TTBCCEEEEECSSSCEEEEECCSSCBHHHHHHTSCCCCCHHHHHHHHHHHHHHHHH
T ss_pred HHHhCCC-----------------CCEeeEEEEEECCeEEEEEEcCCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHH
Confidence 6665532 111212122224556899999999999887543334567776666666655 889
Q ss_pred HHhcCccccCCCCCCeEEccCCCCceEEEecccccccCH
Q 002031 282 IYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 320 (977)
Q Consensus 282 i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 320 (977)
+|..||+||||||.|||++.+ +.++|+|||+++.++.
T Consensus 148 LH~~~IiHRDlKp~NILl~~~--~~~Ki~DFGla~~~~~ 184 (307)
T 3omv_A 148 LHAKNIIHRDMKSNNIFLHEG--LTVKIGDFGLATVKSR 184 (307)
T ss_dssp HHHTTCBCSCCCSSSEEEETT--EEEEECCCSSCBC---
T ss_pred HHHCCccCCccCHHHEEECCC--CcEEEeeccCceeccc
Confidence 999999999999999999965 8999999999987654
|
| >2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A* | Back alignment and structure |
|---|
Probab=99.67 E-value=7.1e-17 Score=180.02 Aligned_cols=180 Identities=17% Similarity=0.130 Sum_probs=119.5
Q ss_pred HHHHHHHHHHhCCCCCCHHHHHHHHHHHhCCChhhcccccCccccccccccEEEEEEec-CCCEEEEEEecCChhhhhHh
Q 002031 82 PYISLLKQLQDSLPPRPVQEVSQTIEREFGESMGGMFMDFVETPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILE 160 (977)
Q Consensus 82 ~~~~~L~~Lqd~~p~~~~~~v~~~l~~elg~~~~~~f~~~d~~piasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~ 160 (977)
+.-.....|.-..++++++++++.++..++.+....+-++. ++||+|++|+||+|+.+ +|+.||||+.++.......
T Consensus 10 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~lg~G~~g~V~~a~~~~~g~~vavK~~~~~~~~~~~- 87 (321)
T 2c30_A 10 GVDLGTENLYFQSGVVTHEQFKAALRMVVDQGDPRLLLDSY-VKIGEGSTGIVCLAREKHSGRQVAVKMMDLRKQQRRE- 87 (321)
T ss_dssp ---------------CCHHHHHHHHHTTSCSSCHHHHEEEE-EEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCSHH-
T ss_pred hhhhhccceeecCCcCcHHHHHHHHhhccCCCCchhhhhcc-EEeccCCCeEEEEEEECCCCcEEEEEEEeccchhHHH-
Confidence 33444556666778999999999999888876555443333 48999999999999986 8999999998764321110
Q ss_pred hHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCcHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeee-c
Q 002031 161 DLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-S 239 (977)
Q Consensus 161 Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~ 239 (977)
.+.+|+..+.++++ ..-+.+-..+. .
T Consensus 88 ------------------------------------~~~~E~~~l~~l~h-----------------~niv~~~~~~~~~ 114 (321)
T 2c30_A 88 ------------------------------------LLFNEVVIMRDYQH-----------------FNVVEMYKSYLVG 114 (321)
T ss_dssp ------------------------------------HHHHHHHHHTTCCC-----------------TTBCCEEEEEEET
T ss_pred ------------------------------------HHHHHHHHHHhCCC-----------------CCcceEEEEEEEC
Confidence 13345555443321 01111212222 5
Q ss_pred CCceEEeeccCCCCCCChHHHHhcCCCHHHHHHHHHHHH--HHHHHhcCccccCCCCCCeEEccCCCCceEEEecccccc
Q 002031 240 SETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKK 317 (977)
Q Consensus 240 ~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~ 317 (977)
...+|||||++|.+|.++. ....++...+...+.+++ +..+|..|++|+|+||+||+++.+ ++++|+|||++..
T Consensus 115 ~~~~lv~e~~~~~~L~~~l--~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivH~Dlkp~NIll~~~--~~~kl~Dfg~~~~ 190 (321)
T 2c30_A 115 EELWVLMEFLQGGALTDIV--SQVRLNEEQIATVCEAVLQALAYLHAQGVIHRDIKSDSILLTLD--GRVKLSDFGFCAQ 190 (321)
T ss_dssp TEEEEEECCCCSCBHHHHH--TTCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTT--CCEEECCCTTCEE
T ss_pred CEEEEEEecCCCCCHHHHH--HhcCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECCC--CcEEEeeeeeeee
Confidence 6678999999999998763 345567777766666655 889999999999999999999865 8999999999887
Q ss_pred cCH
Q 002031 318 LSS 320 (977)
Q Consensus 318 l~~ 320 (977)
+..
T Consensus 191 ~~~ 193 (321)
T 2c30_A 191 ISK 193 (321)
T ss_dssp CCS
T ss_pred ccc
Confidence 654
|
| >4asz_A BDNF/NT-3 growth factors receptor; transferase, TRKA, TRKB; 1.70A {Homo sapiens} PDB: 4at3_A* 4at4_A* 4at5_A* 3v5q_A* | Back alignment and structure |
|---|
Probab=99.66 E-value=5.6e-17 Score=178.79 Aligned_cols=141 Identities=20% Similarity=0.208 Sum_probs=97.2
Q ss_pred cccccccccEEEEEEec------CCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccC
Q 002031 124 TPLATASIAQVHRATLV------DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELD 197 (977)
Q Consensus 124 ~piasaSigqV~~A~l~------~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld 197 (977)
+.||+|+||+||+|+++ +|+.||||+.+..-.+. +-+
T Consensus 19 ~~lG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~-------------------------------------~~~ 61 (299)
T 4asz_A 19 RELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNA-------------------------------------RKD 61 (299)
T ss_dssp EEEEC--CCCEEEEEECSCC----CEEEEEEEECSCCHHH-------------------------------------HHH
T ss_pred eEEeeCCCcEEEEEEECCcccCCCCEEEEEEEeCCCChHH-------------------------------------HHH
Confidence 67999999999999864 57899999986532110 013
Q ss_pred cHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeee-cCCceEEeeccCCCCCCChHHHHh------------cC
Q 002031 198 FNSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLEA------------FG 264 (977)
Q Consensus 198 ~~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLVmE~i~G~~L~~~~~~~~------------~~ 264 (977)
|.+|++.+.+++| ..-|.+=.++. ....+|||||++|++|.++..... ..
T Consensus 62 f~~E~~il~~l~H-----------------pnIV~l~g~~~~~~~~~lV~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~ 124 (299)
T 4asz_A 62 FHREAELLTNLQH-----------------EHIVKFYGVCVEGDPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTE 124 (299)
T ss_dssp HHHHHHHHTTCCC-----------------TTBCCEEEEECSSSSEEEEEECCTTCBHHHHHHHTSHHHHHC----CCCC
T ss_pred HHHHHHHHHhCCC-----------------CCCccEEEEEeeCCEEEEEEEcCCCCcHHHHHHhcCcccccccccCCCCC
Confidence 5667776665532 11122222222 355689999999999988753211 23
Q ss_pred CCHHHHHHHHHHHH--HHHHHhcCccccCCCCCCeEEccCCCCceEEEecccccccCH
Q 002031 265 VNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 320 (977)
Q Consensus 265 ~~~~~l~~~l~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 320 (977)
++...+...+.++. +..+|..||+|||+||.|||++.+ +.++|+|||+++.+..
T Consensus 125 l~~~~~~~i~~qia~gl~yLH~~~iiHRDlKp~NILl~~~--~~~Ki~DFGla~~~~~ 180 (299)
T 4asz_A 125 LTQSQMLHIAQQIAAGMVYLASQHFVHRDLATRNCLVGEN--LLVKIGDFGMSRDVYS 180 (299)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECGG--GCEEECCCSCHHHHTG
T ss_pred CCHHHHHHHHHHHHHHHHHHHhCCcccCccCHhhEEECCC--CcEEECCcccceecCC
Confidence 55566666666655 888999999999999999999866 8999999999976543
|
| >3fpq_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase, ATP-BIND kinase, nucleotide-binding, phosphoprotein; 1.80A {Rattus norvegicus} | Back alignment and structure |
|---|
Probab=99.66 E-value=5.3e-17 Score=177.93 Aligned_cols=151 Identities=15% Similarity=0.080 Sum_probs=101.0
Q ss_pred hhhcccccCccccccccccEEEEEEec-CCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhc
Q 002031 114 MGGMFMDFVETPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEA 192 (977)
Q Consensus 114 ~~~~f~~~d~~piasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l 192 (977)
...-|..|+ +-||+|+||.||+|+.+ +|+.||||+........ .+.
T Consensus 23 ~~gr~~~~~-~~iG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~--~~~------------------------------ 69 (290)
T 3fpq_A 23 NDGRFLKFD-IEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTK--SER------------------------------ 69 (290)
T ss_dssp TTSSEEEEE-EEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCH--HHH------------------------------
T ss_pred CCCceEEee-eEEecCcCcEEEEEEECCCCeEEEEEEEchhhCCH--HHH------------------------------
Confidence 333444454 35999999999999974 79999999875421100 000
Q ss_pred ccccCcHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeeec-----CCceEEeeccCCCCCCChHHHHhcCCCH
Q 002031 193 PKELDFNSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQS-----SETVLILEFMDGIRLNDCESLEAFGVNK 267 (977)
Q Consensus 193 ~~Eld~~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~~-----~~~vLVmE~i~G~~L~~~~~~~~~~~~~ 267 (977)
-.|.+|++.+.+++| ..-|.+=.++.+ ..-+|||||++|++|.++.. +...++.
T Consensus 70 ---~~~~~E~~il~~l~H-----------------pnIV~~~~~~~~~~~~~~~~~lvmEy~~gg~L~~~l~-~~~~l~~ 128 (290)
T 3fpq_A 70 ---QRFKEEAEMLKGLQH-----------------PNIVRFYDSWESTVKGKKCIVLVTELMTSGTLKTYLK-RFKVMKI 128 (290)
T ss_dssp ---HHHHHHHHHHHTCCC-----------------TTBCCEEEEEEEEETTEEEEEEEEECCCSCBHHHHHH-HHSSCCH
T ss_pred ---HHHHHHHHHHHhCCC-----------------CCCCcEEEEEeeccCCCcEEEEEEeCCCCCCHHHHHH-hcCCCCH
Confidence 025567776665532 111222222221 12489999999999988753 2334566
Q ss_pred HHHHHHHHHHH--HHHHHhcC--ccccCCCCCCeEEccCCCCceEEEecccccccC
Q 002031 268 QKVVEEITRAY--AHQIYVDG--FFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 319 (977)
Q Consensus 268 ~~l~~~l~~~~--l~~i~~~G--~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~ 319 (977)
..+...+.+++ +..+|.+| |+||||||+|||++.+ +|.++|+|||+++...
T Consensus 129 ~~~~~~~~qi~~aL~ylH~~~~~IiHRDlKp~NILl~~~-~g~vKl~DFGla~~~~ 183 (290)
T 3fpq_A 129 KVLRSWCRQILKGLQFLHTRTPPIIHRDLKCDNIFITGP-TGSVKIGDLGLATLKR 183 (290)
T ss_dssp HHHHHHHHHHHHHHHHHHTSSSCCCCCCCCGGGEEESST-TSCEEECCTTGGGGCC
T ss_pred HHHHHHHHHHHHHHHHHHHCCCCEEecccChhheeEECC-CCCEEEEeCcCCEeCC
Confidence 66555555554 88899998 9999999999999742 4899999999987543
|
| >3hyh_A Carbon catabolite-derepressing protein kinase; kinase domain, transferase, ATP-binding, carbohydrate metabo kinase, membrane; 2.20A {Saccharomyces cerevisiae} PDB: 3dae_A 2fh9_A 3mn3_A | Back alignment and structure |
|---|
Probab=99.66 E-value=1e-16 Score=174.13 Aligned_cols=143 Identities=17% Similarity=0.262 Sum_probs=91.7
Q ss_pred cccccccccEEEEEEe-cCCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCcHHHH
Q 002031 124 TPLATASIAQVHRATL-VDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (977)
Q Consensus 124 ~piasaSigqV~~A~l-~~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea 202 (977)
+.||+|++|+||+|+. .+|+.||||+.+......- + .+-.+.+|+
T Consensus 19 ~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~--~--------------------------------~~~~~~~Ei 64 (275)
T 3hyh_A 19 KTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKS--D--------------------------------MQGRIEREI 64 (275)
T ss_dssp EEEEC---CCEEEEECTTTCCEEEEEEEECC----------------------------------------CHHHHHHHH
T ss_pred EEEecCcCeEEEEEEECCCCCEEEEEEEeHHHcCCH--H--------------------------------HHHHHHHHH
Confidence 6799999999999997 4799999999865321100 0 011245677
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeee-cCCceEEeeccCCCCCCChHHHHhcCCCHHHHHHHHHHHH--H
Q 002031 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--A 279 (977)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~--l 279 (977)
+.+.++.+ ..-+.+=.++. ...-+|||||++| +|.+... ....++...+...+.+++ +
T Consensus 65 ~il~~l~H-----------------pnIv~~~~~~~~~~~~~ivmEy~~g-~L~~~l~-~~~~l~e~~~~~~~~qi~~al 125 (275)
T 3hyh_A 65 SYLRLLRH-----------------PHIIKLYDVIKSKDEIIMVIEYAGN-ELFDYIV-QRDKMSEQEARRFFQQIISAV 125 (275)
T ss_dssp HHHHHCCC-----------------TTBCCEEEEEECSSEEEEEEECCCE-EHHHHHH-HSCSCCHHHHHHHHHHHHHHH
T ss_pred HHHHHCCC-----------------CCCCeEEEEEEECCEEEEEEeCCCC-CHHHHHH-HcCCCCHHHHHHHHHHHHHHH
Confidence 66666532 11233333343 4556899999954 5655432 234566666666665555 8
Q ss_pred HHHHhcCccccCCCCCCeEEccCCCCceEEEecccccccCHH
Q 002031 280 HQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSSS 321 (977)
Q Consensus 280 ~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~~ 321 (977)
+.+|..|++|||+||+|||++.+ ++++|+|||+++..++.
T Consensus 126 ~ylH~~~IiHRDiKP~NILl~~~--~~vkl~DFGla~~~~~~ 165 (275)
T 3hyh_A 126 EYCHRHKIVHRDLKPENLLLDEH--LNVKIADFGLSNIMTDG 165 (275)
T ss_dssp HHHHHTTCCCCCCCTTTEEECTT--CCEEECCSSCC------
T ss_pred HHHHHCCcccccCChHHeEECCC--CCEEEeecCCCeecCCC
Confidence 88999999999999999999865 89999999999876543
|
| >4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.65 E-value=1.2e-16 Score=178.61 Aligned_cols=142 Identities=19% Similarity=0.168 Sum_probs=93.4
Q ss_pred cccccccccEEEEEEec------CCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccC
Q 002031 124 TPLATASIAQVHRATLV------DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELD 197 (977)
Q Consensus 124 ~piasaSigqV~~A~l~------~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld 197 (977)
+.||+|+||.||+|+++ +|+.||||+.+..-.... -+
T Consensus 47 ~~LG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~~-------------------------------------~~ 89 (329)
T 4aoj_A 47 WELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESAR-------------------------------------QD 89 (329)
T ss_dssp EEEEECSSEEEEEEEESSSCC---CEEEEEEEESCCSHHHH-------------------------------------HH
T ss_pred EEEccCCCcEEEEEEECCcccCCCCeEEEEEEECcCCHHHH-------------------------------------HH
Confidence 57999999999999864 588999999864321100 03
Q ss_pred cHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeee-cCCceEEeeccCCCCCCChHHHH--------------h
Q 002031 198 FNSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLE--------------A 262 (977)
Q Consensus 198 ~~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLVmE~i~G~~L~~~~~~~--------------~ 262 (977)
|.+|++.+.+++| ..-|.+=.++. ....+|||||++|++|.++.... .
T Consensus 90 f~~E~~il~~l~H-----------------pnIV~l~g~~~~~~~~~lV~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~ 152 (329)
T 4aoj_A 90 FQREAELLTMLQH-----------------QHIVRFFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAP 152 (329)
T ss_dssp HHHHHHHHTTCCC-----------------TTBCCEEEEECSSSSEEEEEECCTTCBHHHHHHTSSCC-----------C
T ss_pred HHHHHHHHHhCCC-----------------CCCCcEEEEEEECCEEEEEEEcCCCCcHHHHHHhcCcccccccccccccC
Confidence 5677776665532 11122222222 34568999999999998764211 1
Q ss_pred cCCCHHHHHHHHHHHH--HHHHHhcCccccCCCCCCeEEccCCCCceEEEecccccccCHH
Q 002031 263 FGVNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSSS 321 (977)
Q Consensus 263 ~~~~~~~l~~~l~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~~ 321 (977)
..++...+...+.++. +..+|..||+|||+||.|||++.+ +.++|+|||+++.+...
T Consensus 153 ~~l~~~~~~~i~~qia~gl~yLH~~~iiHRDLKp~NILl~~~--~~~Ki~DFGla~~~~~~ 211 (329)
T 4aoj_A 153 GPLGLGQLLAVASQVAAGMVYLAGLHFVHRDLATRNCLVGQG--LVVKIGDFGMSRDIYST 211 (329)
T ss_dssp CSCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEETT--TEEEECCCC--------
T ss_pred CCCCHHHHHHHHHHHHHHHHHHhcCCeecccccHhhEEECCC--CcEEEcccccceeccCC
Confidence 1245555666665555 888999999999999999999965 89999999999876543
|
| >1zth_A RIO1 serine protein kinase; ribosome biogenesis, rRNA, ADP, manganese, transferase; HET: ADP; 1.89A {Archaeoglobus fulgidus} PDB: 1zp9_A* 1ztf_A* | Back alignment and structure |
|---|
Probab=99.65 E-value=6.1e-16 Score=167.10 Aligned_cols=185 Identities=16% Similarity=0.219 Sum_probs=119.6
Q ss_pred cccccccccEEEEEEe-cCCCE--EEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCcHH
Q 002031 124 TPLATASIAQVHRATL-VDGRQ--VVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNS 200 (977)
Q Consensus 124 ~piasaSigqV~~A~l-~~G~~--VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~ 200 (977)
++||+|++|+||+|+. .+|+. ||||+.+++....-..+ ........+..+. ....-..+..+.+
T Consensus 53 ~~ig~G~~g~Vy~a~~~~~g~~~~vAvK~~~~~~~~~~~~~-----------~~~~~~~~~~~~~--~~~~~~~~~~~~~ 119 (258)
T 1zth_A 53 GVISTGKEANVFYADGVFDGKPVAMAVKIYRIETSEFDKMD-----------EYLYGDERFDMRR--ISPKEKVFIWTEK 119 (258)
T ss_dssp EEEEECSSEEEEEEEEEETTEEEEEEEEEECCC-------G-----------GGTTTCTTSCC------CHHHHHHHHHH
T ss_pred CEEeecceEEEEEEEEcCCCcEeeEEEEEEECCccchhhHH-----------Hhhcccchhhhhc--cChHHHHHHHHHH
Confidence 6899999999999998 68999 99999877532110000 0000000111110 0000112235678
Q ss_pred HHHHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeeecCCceEEeeccC--CCCCCChHHHHhc--CCCHHHHHHHHHH
Q 002031 201 EAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQSSETVLILEFMD--GIRLNDCESLEAF--GVNKQKVVEEITR 276 (977)
Q Consensus 201 Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~~~~~vLVmE~i~--G~~L~~~~~~~~~--~~~~~~l~~~l~~ 276 (977)
|++++.++.+. .+.+|.++.....+|||||+. |.....+...... ......++..++.
T Consensus 120 E~~~l~~l~~~------------------~i~~p~~~~~~~~~lVmE~~g~~g~~~~~L~~~~~~~~~~~~~~i~~qi~~ 181 (258)
T 1zth_A 120 EFRNLERAKEA------------------GVSVPQPYTYMKNVLLMEFIGEDELPAPTLVELGRELKELDVEGIFNDVVE 181 (258)
T ss_dssp HHHHHHHHHHT------------------TCCCCCEEEEETTEEEEECCEETTEECCBHHHHGGGGGGSCHHHHHHHHHH
T ss_pred HHHHHHHHHhC------------------CCCCCeEEEcCCCEEEEEecCCCCCccccHHHHhhccChHHHHHHHHHHHH
Confidence 99999988752 356788887778899999994 3222233222111 1234455555555
Q ss_pred HHHHHHH-hcCccccCCCCCCeEEccCCCCceEEEecccccccCHHHHHHHHHHHHHHHcCCHHHHHHHHHHcCcc
Q 002031 277 AYAHQIY-VDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSSSMKQALAKMFFAAAEGDHVALLSAFAEMGLR 351 (977)
Q Consensus 277 ~~l~~i~-~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~~~r~~~~~l~~a~~~~d~~~~~~~~~~~g~~ 351 (977)
. +..+| ..|++|||+||+|||++. +++|+|||++..++...... ...+|.+.+.+.+..+|+.
T Consensus 182 ~-l~~lH~~~givHrDlkp~NILl~~----~~~liDFG~a~~~~~~~~~~-------~l~rd~~~~~~~f~~~g~~ 245 (258)
T 1zth_A 182 N-VKRLYQEAELVHADLSEYNIMYID----KVYFIDMGQAVTLRHPMAES-------YLERDVRNIIRFFSKYGVK 245 (258)
T ss_dssp H-HHHHHHTSCEECSSCSTTSEEESS----SEEECCCTTCEETTSTTHHH-------HHHHHHHHHHHHHHTTTCC
T ss_pred H-HHHHHHHCCEEeCCCCHHHEEEcC----cEEEEECcccccCCCccHHH-------HHHHHHHHHHHHHHHcCCC
Confidence 4 66789 999999999999999973 79999999999886554333 3567888899999888875
|
| >3ubd_A Ribosomal protein S6 kinase alpha-3; kinase-inhibitor complex, induced FIT, transferase-transfera inhibitor complex; HET: SL0; 1.53A {Mus musculus} PDB: 4el9_A* 3g51_A* 2z7q_A* 2z7r_A* 2z7s_A* | Back alignment and structure |
|---|
Probab=99.65 E-value=5.7e-17 Score=178.67 Aligned_cols=142 Identities=20% Similarity=0.206 Sum_probs=93.9
Q ss_pred cccccccccEEEEEEec----CCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCcH
Q 002031 124 TPLATASIAQVHRATLV----DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFN 199 (977)
Q Consensus 124 ~piasaSigqV~~A~l~----~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~ 199 (977)
+.||+|+||+||+|+.. +|+.||||+.+...... .....+.
T Consensus 30 ~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~~~~-----------------------------------~~~~~~~ 74 (304)
T 3ubd_A 30 KVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKV-----------------------------------RDRVRTK 74 (304)
T ss_dssp EEEECGGGCEEEEEEECSSTTTTCEEEEEEEESEEEEE-----------------------------------EECC---
T ss_pred EEEecCCCeEEEEEEEccCCCCCEEEEEEEEehHHcCh-----------------------------------HHHHHHH
Confidence 67999999999999863 57899999986532110 0011233
Q ss_pred HHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeee-cCCceEEeeccCCCCCCChHHHHhcCCCHHHHHHHHHHHH
Q 002031 200 SEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY 278 (977)
Q Consensus 200 ~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~ 278 (977)
+|++.+.++.+ ..-|.+-.++. ....+|||||++|++|.+... +...++...+...+.+++
T Consensus 75 ~E~~il~~l~H-----------------pnIv~l~~~~~~~~~~~ivmEy~~gg~L~~~l~-~~~~l~e~~~~~~~~qi~ 136 (304)
T 3ubd_A 75 MERDILVEVNH-----------------PFIVKLHYAFQTEGKLYLILDFLRGGDLFTRLS-KEVMFTEEDVKFYLAELA 136 (304)
T ss_dssp ---CCCCCCCC-----------------TTEECEEEEEEETTEEEEEECCCTTCEEHHHHH-HHCCCCHHHHHHHHHHHH
T ss_pred HHHHHHHHCCC-----------------CCCCeEEEEEEECCEEEEEEEcCCCCCHHHHHH-hcCCCCHHHHHHHHHHHH
Confidence 34332222211 11122323333 456689999999999988753 233566666666666655
Q ss_pred --HHHHHhcCccccCCCCCCeEEccCCCCceEEEecccccccCH
Q 002031 279 --AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 320 (977)
Q Consensus 279 --l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 320 (977)
+..+|..||+|||+||+|||++.+ |.++|+|||+++.+..
T Consensus 137 ~aL~ylH~~~IiHRDlKp~NILl~~~--g~vKl~DFGla~~~~~ 178 (304)
T 3ubd_A 137 LALDHLHSLGIIYRDLKPENILLDEE--GHIKLTDFGLSKESID 178 (304)
T ss_dssp HHHHHHHHTTCCCSSCCGGGEEECTT--SCEEEESSEEEEC---
T ss_pred HHHHHHHHCCCcCCCCCHHHeEEcCC--CCEEecccccceeccC
Confidence 889999999999999999999865 8999999999986643
|
| >4gt4_A Tyrosine-protein kinase transmembrane receptor RO; ATP binding, phosphorylation, transferase; 2.41A {Homo sapiens} PDB: 3zzw_A | Back alignment and structure |
|---|
Probab=99.64 E-value=1.9e-16 Score=175.24 Aligned_cols=142 Identities=14% Similarity=0.163 Sum_probs=99.0
Q ss_pred cccccccccEEEEEEec------CCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccC
Q 002031 124 TPLATASIAQVHRATLV------DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELD 197 (977)
Q Consensus 124 ~piasaSigqV~~A~l~------~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld 197 (977)
+.||+|+||.||+|++. +++.||||+.+........ -+
T Consensus 32 ~~lG~G~fG~Vykg~~~~~~~~~~~~~VAvK~l~~~~~~~~~------------------------------------~~ 75 (308)
T 4gt4_A 32 EELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLR------------------------------------EE 75 (308)
T ss_dssp EEEEECSSCEEEEEEEC-------CEEEEEEECCC-CCC-CH------------------------------------HH
T ss_pred eEeccCCCcEEEEEEEcCCccCCCCeEEEEEEECcccChHHH------------------------------------HH
Confidence 46999999999999863 5789999998654221110 13
Q ss_pred cHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeee-cCCceEEeeccCCCCCCChHHHH---------------
Q 002031 198 FNSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLE--------------- 261 (977)
Q Consensus 198 ~~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLVmE~i~G~~L~~~~~~~--------------- 261 (977)
|.+|+..+.++++ ..-|.+=.+.. ....+|||||++|++|.++....
T Consensus 76 f~~E~~il~~l~H-----------------pNIV~l~g~~~~~~~~~lV~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~ 138 (308)
T 4gt4_A 76 FRHEAMLRARLQH-----------------PNVVCLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTV 138 (308)
T ss_dssp HHHHHHHHHHCCC-----------------TTBCCEEEEECSSSSCEEEEECCSSCBHHHHHHTTCSSCCCC-----CCE
T ss_pred HHHHHHHHHhCCC-----------------CCCCCcceEEEECCEEEEEEEcCCCCcHHHHHHhhCcccccccccccccc
Confidence 5677777766643 11122222222 35568999999999998875321
Q ss_pred hcCCCHHHHHHHHHHHH--HHHHHhcCccccCCCCCCeEEccCCCCceEEEecccccccCH
Q 002031 262 AFGVNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 320 (977)
Q Consensus 262 ~~~~~~~~l~~~l~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 320 (977)
...++...+...+.++. +..+|..|++||||||.||||+.+ +.++|.|||+++.+..
T Consensus 139 ~~~l~~~~~~~i~~qia~gl~yLH~~~iiHRDLK~~NILl~~~--~~~Ki~DFGlar~~~~ 197 (308)
T 4gt4_A 139 KSALEPPDFVHLVAQIAAGMEYLSSHHVVHKDLATRNVLVYDK--LNVKISDLGLFREVYA 197 (308)
T ss_dssp ECCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECGG--GCEEECCSCCBCGGGG
T ss_pred ccCCCHHHHHHHHHHHHHHHHHHHhCCCCCCCccccceEECCC--CCEEECCcccceeccC
Confidence 11245555666665555 889999999999999999999966 8999999999987644
|
| >4gyi_A RIO2 kinase; protein kinase, ADP complex, phosphoaspartate, acyl-phosphat ribosome biogenesis, Ser/Thr protein kinase; HET: PHD ADP; 2.20A {Chaetomium thermophilum} PDB: 4gyg_A | Back alignment and structure |
|---|
Probab=99.63 E-value=9.6e-16 Score=173.06 Aligned_cols=181 Identities=13% Similarity=0.231 Sum_probs=121.2
Q ss_pred cccccccccEEEEEEecCCCEEEEEEecCChhhh--hHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCcHHH
Q 002031 124 TPLATASIAQVHRATLVDGRQVVVKVQHQGIKTI--ILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSE 201 (977)
Q Consensus 124 ~piasaSigqV~~A~l~~G~~VAVKv~~p~i~~~--~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~E 201 (977)
.+||+|++|.||+|+..+|++|||||.+++.... +..+-+.+ .... ...+.. ...+...+|
T Consensus 101 ~~IG~Gk~a~VY~a~d~~G~~vAvKi~r~~~~sfr~v~~~r~~~-----------~~~~----~~~~~~--~~rl~A~kE 163 (397)
T 4gyi_A 101 SRIGVGKESDIMIVADEKGKQKVLKIHRLGRISFRTVKANRDYL-----------RNRS----TGSWMY--LSRLAAIKE 163 (397)
T ss_dssp EEEEECSSEEEEEEECTTCCEEEEEEECTTEECCCCCC--CEEC-----------TTSC----HHHHHH--HHHHHHHHH
T ss_pred CEeeeCCceEEEEEECCCCCEEEEEEEecccccHHHHHHHHHHH-----------Hhhc----cccHHH--HHHHHHHHH
Confidence 6899999999999999999999999998764321 10000000 0000 000000 011123468
Q ss_pred HHHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeeecCCceEEeeccCCCCCCChHHHHhcCCCHHHHHHHHHHHHHHH
Q 002031 202 AENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQSSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAYAHQ 281 (977)
Q Consensus 202 a~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~l~~ 281 (977)
.+|+.++.+. .+.+|+++...+.+|||||++|.++.++.. ..+...+...++.. +..
T Consensus 164 ~~nL~rL~~~------------------gv~vp~p~~~~~~~LVME~i~G~~L~~l~~----~~~~~~l~~qll~~-l~~ 220 (397)
T 4gyi_A 164 FAFMKALYEE------------------GFPVPEPIAQSRHTIVMSLVDALPMRQVSS----VPDPASLYADLIAL-ILR 220 (397)
T ss_dssp HHHHHHHHHT------------------TCSCCCEEEEETTEEEEECCSCEEGGGCCC----CSCHHHHHHHHHHH-HHH
T ss_pred HHHHHHHHhc------------------CCCCCeeeeccCceEEEEecCCccHhhhcc----cHHHHHHHHHHHHH-HHH
Confidence 8898888652 467888888788899999999998876532 12455566655554 667
Q ss_pred HHhcCccccCCCCCCeEEccCCCC--------ceEEEecccccccCHHHHHHHHHHHHHHHcCCHHHHHHHHHH-cCcc
Q 002031 282 IYVDGFFNGDPHPGNFLVSKDPPH--------RPILLDFGLTKKLSSSMKQALAKMFFAAAEGDHVALLSAFAE-MGLR 351 (977)
Q Consensus 282 i~~~G~~H~D~hPgNIlv~~~~~g--------~i~LiDFG~~~~l~~~~r~~~~~l~~a~~~~d~~~~~~~~~~-~g~~ 351 (977)
+|..|+||||+||.|||+++++++ .+++|||+.+...+...-.. .+.+|.+.+.+.|.+ .++.
T Consensus 221 lH~~gIVHrDLKp~NILl~~dgd~~d~~~~~~~~~iID~~Q~V~~~hp~a~~-------~l~RDv~ni~~fF~kk~~~~ 292 (397)
T 4gyi_A 221 LAKHGLIHGDFNEFNILIREEKDAEDPSSITLTPIIIXFPQMVSMDHPNAEM-------YFDRDVQCIKRFFERRFHFV 292 (397)
T ss_dssp HHHTTEECSCCSTTSEEEEEEECSSCTTSEEEEEEECCCTTCEETTSTTHHH-------HHHHHHHHHHHHHHHHHCCC
T ss_pred HHHCCCcCCCCCHHHEEEeCCCCcccccccccceEEEEeCCcccCCCCChHH-------HHHHHHHHHHHHHHhccCCc
Confidence 899999999999999999876221 38999999988765433222 246788888888753 4554
|
| >4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A* | Back alignment and structure |
|---|
Probab=99.63 E-value=2.7e-16 Score=173.44 Aligned_cols=144 Identities=13% Similarity=0.076 Sum_probs=87.2
Q ss_pred cccccccccEEEEEEec-CCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCcHHHH
Q 002031 124 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (977)
Q Consensus 124 ~piasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea 202 (977)
+.||+|+||+||+|+.+ +|+.||||+.+..-.+... -.+.+|+
T Consensus 11 ~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~------------------------------------~~~~~E~ 54 (299)
T 4g31_A 11 QCLGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAR------------------------------------EKVMREV 54 (299)
T ss_dssp EEEEECC--EEEEEEETTTCCEEEEEEEEECSSHHHH------------------------------------HHHHHHH
T ss_pred eEEecCCCeEEEEEEECCCCCEEEEEEEeccCCHHHH------------------------------------HHHHHHH
Confidence 57999999999999974 8999999987522111000 0234566
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeee-cC------------CceEEeeccCCCCCCChHHHHh--cCCCH
Q 002031 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SS------------ETVLILEFMDGIRLNDCESLEA--FGVNK 267 (977)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~------------~~vLVmE~i~G~~L~~~~~~~~--~~~~~ 267 (977)
+.+.++.| ..-|.+=.++. .. .-+|||||++|.+|.++..... ...+.
T Consensus 55 ~il~~l~H-----------------pnIV~~~~~~~~~~~~~~~~~~~~~~~l~ivmE~~~gg~L~~~l~~~~~~~~~~~ 117 (299)
T 4g31_A 55 KALAKLEH-----------------PGIVRYFNAWLEKNTTEKLQPSSPKVYLYIQMQLCRKENLKDWMNGRCTIEERER 117 (299)
T ss_dssp HHHTTCCC-----------------TTBCCEEEEEEEEC----------CEEEEEEEECCCSCCHHHHHHTCCSGGGSCH
T ss_pred HHHHhCCC-----------------CCCCeEEEEEEecCccccccccCCCcEEEEEEecCCCCcHHHHHHhcCCCChhHH
Confidence 55544422 11122222221 11 1379999999999987743110 11223
Q ss_pred HHHHHHHHHHH--HHHHHhcCccccCCCCCCeEEccCCCCceEEEecccccccCHHH
Q 002031 268 QKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSSSM 322 (977)
Q Consensus 268 ~~l~~~l~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~~~ 322 (977)
..+...+.+++ +..+|..||+||||||+|||++.+ +.++|+|||+++.++...
T Consensus 118 ~~~~~i~~qi~~al~ylH~~~IiHRDlKp~NILl~~~--~~vKl~DFGla~~~~~~~ 172 (299)
T 4g31_A 118 SVCLHIFLQIAEAVEFLHSKGLMHRDLKPSNIFFTMD--DVVKVGDFGLVTAMDQDE 172 (299)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTT--CCEEECCCCCC-------
T ss_pred HHHHHHHHHHHHHHHHHHHCcCccccCcHHHeEECCC--CcEEEccCccceecCCCc
Confidence 33444444443 888999999999999999999865 899999999999886543
|
| >3hmm_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A* | Back alignment and structure |
|---|
Probab=99.62 E-value=2.3e-16 Score=174.54 Aligned_cols=75 Identities=19% Similarity=0.262 Sum_probs=61.4
Q ss_pred ceEEeeccCCCCCCChHHHHhcCCCHHHHHHHHHHHH--HHHHHhc--------CccccCCCCCCeEEccCCCCceEEEe
Q 002031 242 TVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--AHQIYVD--------GFFNGDPHPGNFLVSKDPPHRPILLD 311 (977)
Q Consensus 242 ~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~--l~~i~~~--------G~~H~D~hPgNIlv~~~~~g~i~LiD 311 (977)
.+|||||++|++|.++ +...+++.........++. +..+|.+ ||+|||+||.|||++.+ +.++|+|
T Consensus 76 ~~lV~Ey~~~gsL~~~--l~~~~l~~~~~~~i~~~ia~gl~ylH~~~~~~~~~~~IiHRDlKp~NILl~~~--~~~Ki~D 151 (303)
T 3hmm_A 76 LWLVSDYHEHGSLFDY--LNRYTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKN--GTCCIAD 151 (303)
T ss_dssp EEEEEECCTTCBHHHH--HHHCCBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCCEECSCCCGGGEEECTT--SCEEECC
T ss_pred EEEEecCCCCCcHHHH--HHhCCCCHHHHHHHHHHHHHHHHHHHHhhhhccCCCCEeeccCCcccEEECCC--CCEEEEe
Confidence 4899999999999887 4455677776666666655 7778866 99999999999999865 8999999
Q ss_pred cccccccCH
Q 002031 312 FGLTKKLSS 320 (977)
Q Consensus 312 FG~~~~l~~ 320 (977)
||+++.++.
T Consensus 152 FGla~~~~~ 160 (303)
T 3hmm_A 152 LGLAVRHDS 160 (303)
T ss_dssp CTTCEEEET
T ss_pred CCCCccccC
Confidence 999887643
|
| >3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A | Back alignment and structure |
|---|
Probab=99.58 E-value=1.8e-15 Score=172.48 Aligned_cols=208 Identities=12% Similarity=0.073 Sum_probs=124.4
Q ss_pred HhcCCCCCCHHHHHHHHHHH-hCCCCCCHHHHHHHHHHHhCCChhhcc---cc-------cC-ccccccccccEEEEEEe
Q 002031 72 LSTRADVLPEPYISLLKQLQ-DSLPPRPVQEVSQTIEREFGESMGGMF---MD-------FV-ETPLATASIAQVHRATL 139 (977)
Q Consensus 72 ls~r~dllp~~~~~~L~~Lq-d~~p~~~~~~v~~~l~~elg~~~~~~f---~~-------~d-~~piasaSigqV~~A~l 139 (977)
-|++.|++++++.+.+.+++ +.+++.....+...+..++-. ....+ .. +. .+.||+|++|+||+|+.
T Consensus 16 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~y~~~~~lG~G~~g~V~~a~~ 94 (377)
T 3byv_A 16 FQGPGDVVIEELFNRIPQANVRTTSEYMQSAADSLVSTSLWN-TGQPFRVESELGERPRTLVRGTVLGQEDPYAYLEATD 94 (377)
T ss_dssp -CCTTHHHHHHHHHHCGGGCCCSTTC-CHHHHHHHHHHHTCC--CCEEEEEESSSCCCEEEEEEEEEEEETTEEEEEEEC
T ss_pred CCCCchHHHHHHHHhCcccccccccccccchhhhhhHHHhcC-CCCcEEEEeecCCCCceEEEcceeecCCCEEEEEEEE
Confidence 37888999999999999999 999999999998888877632 22222 12 22 47899999999999997
Q ss_pred -cCCCEEEEEEecCCh------hhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCcHHHHHHHHHHHHHh
Q 002031 140 -VDGRQVVVKVQHQGI------KTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEAENTRIVSANL 212 (977)
Q Consensus 140 -~~G~~VAVKv~~p~i------~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea~n~~~~~~~~ 212 (977)
.+|+.||||+.+... .+.+..++.+++.+ ..++ -.|+.++...+
T Consensus 95 ~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l-------------------------~~l~----hpniv~~~~~~ 145 (377)
T 3byv_A 95 QETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLL-------------------------RGIK----NQKQAKVHLRF 145 (377)
T ss_dssp -CCCCEEEEEEEEECC-CCTTHHHHHHHHHHGGGGS-------------------------TTCC----SHHHHHHHHCB
T ss_pred CCCCcEEEEEEEeeccccchHHHHHHHHHHHHHHhc-------------------------cccC----CHHHHHHHhhh
Confidence 579999999976321 12222222111110 0110 13554444322
Q ss_pred CCCCCCCCCCC------CCCCCCCeEeceeeecCCceEEeeccCCCCCCChHHHHhcCCCH-------HHHHHHHHHHH-
Q 002031 213 GCKNKHEDSNK------KPAYEVDVLIPEVIQSSETVLILEFMDGIRLNDCESLEAFGVNK-------QKVVEEITRAY- 278 (977)
Q Consensus 213 ~~~~~~~~~~~------~~~~~~~v~vP~v~~~~~~vLVmE~i~G~~L~~~~~~~~~~~~~-------~~l~~~l~~~~- 278 (977)
.....+..... .......+.++ ..+|||||++ ++|.++...... .+. ..+...+.+++
T Consensus 146 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~------~~~lv~E~~~-g~L~~~l~~~~~-~~~~~~~l~~~~~~~i~~qi~~ 217 (377)
T 3byv_A 146 IFPFDLVKDPQKKKMIRVRLDERDMWVL------SRFFLYPRMQ-SNLQTFGEVLLS-HSSTHKSLVHHARLQLTLQVIR 217 (377)
T ss_dssp CCCSEEEECTTSCSEEEC------CEEE------SEEEEEECCS-EEHHHHHHHHHH-TTTTTHHHHHHHHHHHHHHHHH
T ss_pred hhhhhhhhccCCccccccccCCCceEEE------EEEEEEeccC-CCHHHHHHhccc-cccccccccHHHHHHHHHHHHH
Confidence 10000000000 00000001111 2579999995 588776442211 111 23333333333
Q ss_pred -HHHHHhcCccccCCCCCCeEEccCCCCceEEEecccccccC
Q 002031 279 -AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 319 (977)
Q Consensus 279 -l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~ 319 (977)
+..+|..|++||||||+|||++.+ ++++|+|||++....
T Consensus 218 aL~~LH~~~ivHrDikp~NIll~~~--~~~kL~DFG~a~~~~ 257 (377)
T 3byv_A 218 LLASLHHYGLVHTYLRPVDIVLDQR--GGVFLTGFEHLVRDG 257 (377)
T ss_dssp HHHHHHHTTEECSCCCGGGEEECTT--CCEEECCGGGCEETT
T ss_pred HHHHHHhCCeecCCCCHHHEEEcCC--CCEEEEechhheecC
Confidence 788999999999999999999965 899999999988543
|
| >1zar_A RIO2 kinase; serine kinase, winged-helix, RIO domain, ADP-Mn complex, rRNA processing, transferase; HET: ADP; 1.75A {Archaeoglobus fulgidus} SCOP: a.4.5.56 d.144.1.9 PDB: 1tqi_A* 1tqp_A* 1tqm_A* 1zao_A* | Back alignment and structure |
|---|
Probab=99.58 E-value=6.2e-15 Score=161.33 Aligned_cols=173 Identities=17% Similarity=0.213 Sum_probs=114.0
Q ss_pred cccccccccEEEEEEecCCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCcHHHHH
Q 002031 124 TPLATASIAQVHRATLVDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEAE 203 (977)
Q Consensus 124 ~piasaSigqV~~A~l~~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea~ 203 (977)
+.||+|++|+||+|+..+|+.||||+.+++.... . +....+... ...++. .....+.+|.+
T Consensus 96 ~~iG~G~~g~Vy~~~~~~g~~valK~~~~~~~~~-~-~~~~~~~~~----------~~~w~~-------~~~~~~~~E~~ 156 (282)
T 1zar_A 96 KLMGEGKESAVFNCYSEKFGECVVKFHKVGHTSF-K-KVKEKRDYG----------DLHFSV-------LAIRSARNEFR 156 (282)
T ss_dssp EEEEECSSEEEEEEEETTTEEEEEEEECC--------CCCC-----------------CHHH-------HHHHHHHHHHH
T ss_pred CEeccCCCceEEEEEeCCCCEEEEEEEECCCCch-h-hhhhhhhhc----------chhhHH-------HHHHHHHHHHH
Confidence 6899999999999999789999999987653211 0 000000000 000000 01124667777
Q ss_pred HHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeeecCCceEEeeccCCCCCCChHHHHhcCCCHHHHHHHHHHHHHHHHH
Q 002031 204 NTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQSSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAYAHQIY 283 (977)
Q Consensus 204 n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~l~~i~ 283 (977)
.+.++. . +.+|.++..+..++||||++|.+|.++ . ......++..++.. +..+|
T Consensus 157 ~l~~l~-------------------~-~~v~~~~~~~~~~lvmE~~~g~~L~~l-~----~~~~~~i~~qi~~~-l~~lH 210 (282)
T 1zar_A 157 ALQKLQ-------------------G-LAVPKVYAWEGNAVLMELIDAKELYRV-R----VENPDEVLDMILEE-VAKFY 210 (282)
T ss_dssp HHHHTT-------------------T-SSSCCEEEEETTEEEEECCCCEEGGGC-C----CSCHHHHHHHHHHH-HHHHH
T ss_pred HHHhcc-------------------C-CCcCeEEeccceEEEEEecCCCcHHHc-c----hhhHHHHHHHHHHH-HHHHH
Confidence 776653 1 456666666677999999999999873 1 12344555555554 67889
Q ss_pred hcCccccCCCCCCeEEccCCCCceEEEecccccccCHHHHHHHHHHHHHHHcCCHHHHHHHH-HHcCcc
Q 002031 284 VDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSSSMKQALAKMFFAAAEGDHVALLSAF-AEMGLR 351 (977)
Q Consensus 284 ~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~~~r~~~~~l~~a~~~~d~~~~~~~~-~~~g~~ 351 (977)
..|++|||+||.|||++ + ++++|+|||++...+...-..+ ..+|.+.+.+.+ ...|+.
T Consensus 211 ~~giiHrDlkp~NILl~-~--~~vkl~DFG~a~~~~~~~a~e~-------l~rdv~~i~~~f~~~~~~~ 269 (282)
T 1zar_A 211 HRGIVHGDLSQYNVLVS-E--EGIWIIDFPQSVEVGEEGWREI-------LERDVRNIITYFSRTYRTE 269 (282)
T ss_dssp HTTEECSCCSTTSEEEE-T--TEEEECCCTTCEETTSTTHHHH-------HHHHHHHHHHHHHHHHCCC
T ss_pred HCCCEeCCCCHHHEEEE-C--CcEEEEECCCCeECCCCCHHHH-------HHHHHHHHHHHHHHhcCCC
Confidence 99999999999999998 5 8999999999998765433222 356667777777 555654
|
| >4f9c_A Cell division cycle 7-related protein kinase; Ser/Thr protein kinase, transferase, phosphorylation, cell C cell division, mitosis, S phase; HET: 0SX; 2.08A {Homo sapiens} PDB: 4f99_A* 4f9b_A* 4f9a_A* | Back alignment and structure |
|---|
Probab=99.58 E-value=2e-15 Score=171.07 Aligned_cols=145 Identities=16% Similarity=0.228 Sum_probs=97.5
Q ss_pred hhhcccccCccccccccccEEEEEEec----CCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHh
Q 002031 114 MGGMFMDFVETPLATASIAQVHRATLV----DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWC 189 (977)
Q Consensus 114 ~~~~f~~~d~~piasaSigqV~~A~l~----~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~ 189 (977)
+.+.|+-. +.||+|+||+||+|+.+ +++.||||+..+.-..
T Consensus 19 l~~~Y~i~--~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~~~--------------------------------- 63 (361)
T 4f9c_A 19 LSNVFKIE--DKIGEGTFSSVYLATAQLQVGPEEKIALKHLIPTSHP--------------------------------- 63 (361)
T ss_dssp GGGTCEEE--EEEEECSSEEEEEEEEEBTTSCEEEEEEEEECTTSCH---------------------------------
T ss_pred ccCcEEEE--EEEecccCcEEEEEEEcccCCCCCEEEEEEEccccCH---------------------------------
Confidence 44445432 57999999999999863 5789999987543110
Q ss_pred hhcccccCcHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeee-cCCceEEeeccCCCCCCChHHHHhcCCCHH
Q 002031 190 KEAPKELDFNSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAFGVNKQ 268 (977)
Q Consensus 190 ~~l~~Eld~~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~ 268 (977)
..+.+|.+.+..+.+ ...-+.+-.++. ...-+|||||++|.+|.++. ..++..
T Consensus 64 ------~~~~~E~~~l~~~~~----------------h~nIv~l~~~~~~~~~~~lvmE~~~g~~L~~~~----~~l~~~ 117 (361)
T 4f9c_A 64 ------IRIAAELQCLTVAGG----------------QDNVMGVKYCFRKNDHVVIAMPYLEHESFLDIL----NSLSFQ 117 (361)
T ss_dssp ------HHHHHHHHHHHHTCS----------------BTTBCCCSEEEEETTEEEEEEECCCCCCHHHHH----TTCCHH
T ss_pred ------HHHHHHHHHHHHhcC----------------CCCCceEEEEEEECCEEEEEEeCCCcccHHHHH----cCCCHH
Confidence 012234433333211 011223333443 45568999999999887653 235666
Q ss_pred HHHHHHHHHH--HHHHHhcCccccCCCCCCeEEccCCCCceEEEecccccccCH
Q 002031 269 KVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 320 (977)
Q Consensus 269 ~l~~~l~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 320 (977)
.+...+.+++ +..+|..||+|||+||+|||++.+ .+.++|+|||+++.+.+
T Consensus 118 ~~~~~~~qll~al~ylH~~gIiHRDiKPeNiLl~~~-~~~~kl~DFGla~~~~~ 170 (361)
T 4f9c_A 118 EVREYMLNLFKALKRIHQFGIVHRDVKPSNFLYNRR-LKKYALVDFGLAQGTHD 170 (361)
T ss_dssp HHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEETT-TTEEEECCCTTCEECTT
T ss_pred HHHHHHHHHHHHHHHHHHCCeEeCcCCHHHeEEeCC-CCeEEECcCCCCcccCC
Confidence 6555555554 888999999999999999999854 47899999999986643
|
| >4ase_A Vascular endothelial growth factor receptor 2; transferase, angiogenesis, signaling protein, phosphorylatio receptor, inhibitor; HET: AV9; 1.83A {Homo sapiens} PDB: 4agd_A* 4asd_A* 4agc_A* | Back alignment and structure |
|---|
Probab=99.56 E-value=3.9e-15 Score=167.75 Aligned_cols=143 Identities=17% Similarity=0.144 Sum_probs=98.8
Q ss_pred cccccccccEEEEEEec------CCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccC
Q 002031 124 TPLATASIAQVHRATLV------DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELD 197 (977)
Q Consensus 124 ~piasaSigqV~~A~l~------~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld 197 (977)
+.||+|+||.||+|+.+ +++.||||+.+.+.... +. -+
T Consensus 70 ~~LG~G~fG~Vy~a~~~~~~~~~~~k~VAvK~l~~~~~~~---~~---------------------------------~~ 113 (353)
T 4ase_A 70 KPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHS---EH---------------------------------RA 113 (353)
T ss_dssp EEEEECSSEEEEEEEEETSSSTTCEEEEEEEEECTTCCHH---HH---------------------------------HH
T ss_pred eEEecCCCeEEEEEEEcCCCcccCCeEEEEEEEccccChH---HH---------------------------------HH
Confidence 67999999999999864 34689999987543211 00 13
Q ss_pred cHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeee--cCCceEEeeccCCCCCCChHHHHh-------------
Q 002031 198 FNSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ--SSETVLILEFMDGIRLNDCESLEA------------- 262 (977)
Q Consensus 198 ~~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~--~~~~vLVmE~i~G~~L~~~~~~~~------------- 262 (977)
|.+|++.+.++.+. ..-|.+-.++. ....+||||||+|++|.++.....
T Consensus 114 ~~~E~~il~~l~hh----------------pnIV~l~g~~~~~~~~~~iV~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~ 177 (353)
T 4ase_A 114 LMSELKILIHIGHH----------------LNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDL 177 (353)
T ss_dssp HHHHHHHHHHHCCC----------------TTBCCEEEEECCTTSCCEEEEECCTTEEHHHHHHHTGGGBCCC-------
T ss_pred HHHHHHHHHHcCCC----------------CcEEEEEEEEEecCCEEEEEEEcCCCCCHHHHHHhcccccccccccchhh
Confidence 56677777766431 00122222222 233589999999999988754221
Q ss_pred --cCCCHHHHHHHHHHHH--HHHHHhcCccccCCCCCCeEEccCCCCceEEEecccccccCH
Q 002031 263 --FGVNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 320 (977)
Q Consensus 263 --~~~~~~~l~~~l~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 320 (977)
..++...+...+.++. +..+|..|++||||||.|||++.+ +.++|+|||+++.+..
T Consensus 178 ~~~~l~~~~~~~~~~qia~gl~yLH~~~iiHRDLK~~NILl~~~--~~vKi~DFGlar~~~~ 237 (353)
T 4ase_A 178 YKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEK--NVVKICDFGLARDIYK 237 (353)
T ss_dssp CTTCBCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECGG--GCEEECCCGGGSCTTT
T ss_pred ccccCCHHHHHHHHHHHHHHHHhHhhCCeecCccCccceeeCCC--CCEEECcchhhhhccc
Confidence 1244555555555544 888999999999999999999966 8999999999987643
|
| >4b99_A Mitogen-activated protein kinase 7; transferase, inhibitor; HET: R4L; 2.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.55 E-value=4e-15 Score=170.49 Aligned_cols=141 Identities=15% Similarity=0.222 Sum_probs=94.0
Q ss_pred cccccccccEEEEEEec-CCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCcHHHH
Q 002031 124 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (977)
Q Consensus 124 ~piasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea 202 (977)
+.||.|+||+||+|+.+ +|+.||||+.+...... .+. -.+.+|+
T Consensus 60 ~~lG~G~fG~V~~a~~~~t~~~vAiK~i~~~~~~~--~~~---------------------------------~~~~~Ei 104 (398)
T 4b99_A 60 ETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVV--TNA---------------------------------KRTLREL 104 (398)
T ss_dssp EEEEECSSCEEEEEEETTTCCEEEEEEETTTTSSH--HHH---------------------------------HHHHHHH
T ss_pred EEEecccCeEEEEEEECCCCCEEEEEEECccccch--HHH---------------------------------HHHHHHH
Confidence 57999999999999974 89999999875322110 000 0134566
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeee-------cCCceEEeeccCCCCCCChHHHHhcCCCHHHHHHHHH
Q 002031 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-------SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEIT 275 (977)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-------~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~ 275 (977)
+.+.++.+ ...|.+-.++. ...-+|||||++| .|.+... ....++...+...+.
T Consensus 105 ~il~~l~H-----------------pnIv~l~~~~~~~~~~~~~~~~~ivmE~~~g-~L~~~i~-~~~~l~~~~~~~~~~ 165 (398)
T 4b99_A 105 KILKHFKH-----------------DNIIAIKDILRPTVPYGEFKSVYVVLDLMES-DLHQIIH-SSQPLTLEHVRYFLY 165 (398)
T ss_dssp HHHHHCCC-----------------TTBCCEEEECCCSSCTTTCCCEEEEEECCSE-EHHHHHT-SSSCCCHHHHHHHHH
T ss_pred HHHHhcCC-----------------CCcceEeeeeecccccccCCEEEEEEeCCCC-CHHHHHH-hcCCCCHHHHHHHHH
Confidence 66655532 11122222221 1345899999986 3544321 223466666665555
Q ss_pred HHH--HHHHHhcCccccCCCCCCeEEccCCCCceEEEecccccccCH
Q 002031 276 RAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 320 (977)
Q Consensus 276 ~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 320 (977)
+++ +..+|..||+||||||+|||++.+ |.++|+|||+++.+..
T Consensus 166 qil~al~ylH~~~iiHRDlKP~NIl~~~~--~~~Ki~DFGla~~~~~ 210 (398)
T 4b99_A 166 QLLRGLKYMHSAQVIHRDLKPSNLLVNEN--CELKIGDFGMARGLCT 210 (398)
T ss_dssp HHHHHHHHHHHTTCBCCCCCGGGEEECTT--CCEEECCCTTCBCC--
T ss_pred HHHHHHHHHHHCcCcCCCcCccccccCCC--CCEEEeecceeeeccc
Confidence 555 888999999999999999999865 8999999999987754
|
| >3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A | Back alignment and structure |
|---|
Probab=99.53 E-value=6.5e-15 Score=176.80 Aligned_cols=143 Identities=22% Similarity=0.323 Sum_probs=99.7
Q ss_pred cccccccccEEEEEEec-CCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCcHHHH
Q 002031 124 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (977)
Q Consensus 124 ~piasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea 202 (977)
+.||.|+||.||+|+.+ +|+.||||+.+..-.. +.. .+.+|+
T Consensus 163 ~~lG~G~fg~V~~~~~~~tg~~~AiK~i~~~~~~----~~~---------------------------------~~~~Ei 205 (573)
T 3uto_A 163 EELGTGAFGVVHRVTERATGNNFAAKFVMTPHES----DKE---------------------------------TVRKEI 205 (573)
T ss_dssp EEEEEETTEEEEEEEETTTCCEEEEEEEECCSHH----HHH---------------------------------HHHHHH
T ss_pred EEEeeccCeEEEEEEECCCCCEEEEEEEeccchh----hHH---------------------------------HHHHHH
Confidence 57999999999999985 8999999987532111 000 133455
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeee-cCCceEEeeccCCCCCCChHHHHhcCCCHHHHHHHHHHHH--H
Q 002031 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--A 279 (977)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~--l 279 (977)
+.+..+++ ..-+.+-.++. ....+|||||++|++|.+........++...+...+.+++ +
T Consensus 206 ~il~~l~h-----------------pnIv~l~~~~~~~~~~~iv~E~~~gg~L~~~i~~~~~~l~e~~~~~~~~qi~~al 268 (573)
T 3uto_A 206 QTMSVLRH-----------------PTLVNLHDAFEDDNEMVMIYEFMSGGELFEKVADEHNKMSEDEAVEYMRQVCKGL 268 (573)
T ss_dssp HHHHHTCC-----------------TTBCCEEEEEECSSEEEEEEECCCCCBHHHHHTCTTSCEEHHHHHHHHHHHHHHH
T ss_pred HHHHhCCC-----------------CCCCeEEEEEEECCEEEEEEeecCCCcHHHHHHHhCCCCCHHHHHHHHHHHHHHH
Confidence 55555432 11233334443 4566899999999988765322223355555555555544 8
Q ss_pred HHHHhcCccccCCCCCCeEEccCCCCceEEEecccccccCH
Q 002031 280 HQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 320 (977)
Q Consensus 280 ~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 320 (977)
..+|..||+||||||.|||++.+..+.++|+|||+++.+++
T Consensus 269 ~ylH~~~iiHRDlKp~Nill~~~~~~~vKl~DFG~a~~~~~ 309 (573)
T 3uto_A 269 CHMHENNYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDP 309 (573)
T ss_dssp HHHHHTTEECCCCCGGGEEESSSSCCCEEECCCSSCEECCT
T ss_pred HHHHHCCeeeccCChhhccccCCCCCCEEEeeccceeEccC
Confidence 88999999999999999999865558999999999998764
|
| >3v5w_A G-protein coupled receptor kinase 2; inhibitor complex, protein kinase, beta propeller, RGS homol domain; HET: 8PR; 2.07A {Homo sapiens} PDB: 3cik_A* 3krw_A* 3krx_A* 1omw_A 1ym7_A 2bcj_A* 3uzs_A 3uzt_A 3pvu_A* 3psc_A* 3pvw_A* 1bak_A | Back alignment and structure |
|---|
Probab=99.53 E-value=1.2e-14 Score=174.46 Aligned_cols=145 Identities=14% Similarity=0.093 Sum_probs=96.2
Q ss_pred cccccccccEEEEEEec-CCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCcHHHH
Q 002031 124 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (977)
Q Consensus 124 ~piasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea 202 (977)
+.||.|+||.||+|+.+ +|+.||||+++...-.. .+ .+-...+|.
T Consensus 195 k~LG~G~fG~V~la~~~~tg~~~AiK~i~K~~i~~--~~--------------------------------~~~~~~~E~ 240 (689)
T 3v5w_A 195 RIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKM--KQ--------------------------------GETLALNER 240 (689)
T ss_dssp EEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHH--TT--------------------------------CHHHHHHHH
T ss_pred EEEecccCeEEEEEEECCCCCEEEEEEEeHHHcch--hh--------------------------------hHHHHHHHH
Confidence 68999999999999985 79999999975321000 00 000011221
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCC-eEeceeee-cCCceEEeeccCCCCCCChHHHHhcCCCHHHHHHHHHHHH--
Q 002031 203 ENTRIVSANLGCKNKHEDSNKKPAYEVD-VLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY-- 278 (977)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~-v~vP~v~~-~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~-- 278 (977)
..+..+ ... +++. |.+-..+. ....+|||||++|++|.+... ....++...+...+.+++
T Consensus 241 ~~l~ll-~~~--------------~HP~IV~l~~~f~~~~~lylVmEy~~GGdL~~~l~-~~~~l~E~~a~~y~~qIl~a 304 (689)
T 3v5w_A 241 IMLSLV-STG--------------DCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLS-QHGVFSEADMRFYAAEIILG 304 (689)
T ss_dssp HHHHHH-SSS--------------CCTTBCCEEEEEECSSEEEEEECCCCSCBHHHHHH-HHCCCCHHHHHHHHHHHHHH
T ss_pred HHHHHH-hhC--------------CCCCEeEEEEEEEECCEEEEEEecCCCCcHHHHHH-hcCCCCHHHHHHHHHHHHHH
Confidence 111111 111 1111 22222333 455689999999999987743 233466666655555555
Q ss_pred HHHHHhcCccccCCCCCCeEEccCCCCceEEEecccccccCH
Q 002031 279 AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 320 (977)
Q Consensus 279 l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 320 (977)
+..+|..||+||||||+|||++.+ |.|+|+|||+++.++.
T Consensus 305 L~yLH~~gIiHRDLKPeNILld~~--G~vKL~DFGlA~~~~~ 344 (689)
T 3v5w_A 305 LEHMHNRFVVYRDLKPANILLDEH--GHVRISDLGLACDFSK 344 (689)
T ss_dssp HHHHHTTTEECCCCSGGGEEECTT--SCEEECCCTTCEECSS
T ss_pred HHHHHHCCccccCCchHHeEEeCC--CCEEecccceeeecCC
Confidence 889999999999999999999965 8999999999988754
|
| >1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=99.53 E-value=8.6e-15 Score=163.95 Aligned_cols=172 Identities=16% Similarity=0.148 Sum_probs=96.4
Q ss_pred hCCCCCCHHHHHHHHHHHhCCChhhcccccCc----------cccccccccEEEEEEecC-----CCEEEEEEecCChhh
Q 002031 92 DSLPPRPVQEVSQTIEREFGESMGGMFMDFVE----------TPLATASIAQVHRATLVD-----GRQVVVKVQHQGIKT 156 (977)
Q Consensus 92 d~~p~~~~~~v~~~l~~elg~~~~~~f~~~d~----------~piasaSigqV~~A~l~~-----G~~VAVKv~~p~i~~ 156 (977)
+..+.-+.......++...+.++.+.+..|+. +.||+|++|+||+|+.+. +..||||+.+++...
T Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vavK~~~~~~~~ 87 (333)
T 1mqb_A 8 HHHDYDIPTTENLYFQGAMGSDPNQAVLKFTTEIHPSCVTRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTE 87 (333)
T ss_dssp ------------------------------CCBCCTTTEEEEEEEEECSSSEEEEEEEEC---CCEEEEEEEEECTTCCH
T ss_pred cccccCCCCCccccccccccCChhhhhhhccccCChHHhhcccEEecCCCeEEEEEEEecCCCCccccEEEEEcCCCCCH
Confidence 44555566667777777777777776666654 789999999999998742 346999998765321
Q ss_pred hhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCcHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCeEecee
Q 002031 157 IILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEV 236 (977)
Q Consensus 157 ~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v 236 (977)
.. +.++.+|++.+.++.+ ..|+++
T Consensus 88 ~~------------------------------------~~~~~~E~~~l~~l~h--------------------~~iv~~ 111 (333)
T 1mqb_A 88 KQ------------------------------------RVDFLGEAGIMGQFSH--------------------HNIIRL 111 (333)
T ss_dssp HH------------------------------------HHHHHHHHHHHHTCCC--------------------TTBCCE
T ss_pred HH------------------------------------HHHHHHHHHHHHhCCC--------------------CCCCcE
Confidence 11 0124455555544321 123333
Q ss_pred ee----cCCceEEeeccCCCCCCChHHHHhcCCCHHHHHHHHHHHH--HHHHHhcCccccCCCCCCeEEccCCCCceEEE
Q 002031 237 IQ----SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILL 310 (977)
Q Consensus 237 ~~----~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~Li 310 (977)
+. ....+|||||++|.+|.++.......++...+...+.+++ +..+|..|++|+|+||.||+++.+ +.++|+
T Consensus 112 ~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dikp~NIl~~~~--~~~kl~ 189 (333)
T 1mqb_A 112 EGVISKYKPMMIITEYMENGALDKFLREKDGEFSVLQLVGMLRGIAAGMKYLANMNYVHRDLAARNILVNSN--LVCKVS 189 (333)
T ss_dssp EEEECSSSSEEEEEECCTTEEHHHHHHHTTTCSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTT--CCEEEC
T ss_pred EEEEecCCCcEEEEeCCCCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCChheEEECCC--CcEEEC
Confidence 32 3556899999999999887543334566666666666655 888999999999999999999855 899999
Q ss_pred ecccccccCHH
Q 002031 311 DFGLTKKLSSS 321 (977)
Q Consensus 311 DFG~~~~l~~~ 321 (977)
|||++..+...
T Consensus 190 Dfg~~~~~~~~ 200 (333)
T 1mqb_A 190 DFGLSRVLEDD 200 (333)
T ss_dssp CCCC-------
T ss_pred CCCcchhhccc
Confidence 99999877543
|
| >3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.52 E-value=1.2e-14 Score=160.84 Aligned_cols=169 Identities=16% Similarity=0.221 Sum_probs=97.0
Q ss_pred HHHHHhCCCCCCHHHHHHHHHHHhCCChhhcccccCccccccccccEEEEEEec-CCCEEEEEEecCChhhhhHhhHHHH
Q 002031 87 LKQLQDSLPPRPVQEVSQTIEREFGESMGGMFMDFVETPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNA 165 (977)
Q Consensus 87 L~~Lqd~~p~~~~~~v~~~l~~elg~~~~~~f~~~d~~piasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l 165 (977)
|+.+|+..|| ...+++.-++.+++...+.|... +.||+|++|.||+|+.+ +|+.||||+.+.... ..
T Consensus 2 l~~~~~~~~~--~~~~~~~~~~~~~~~~~~~y~~~--~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~------~~-- 69 (314)
T 3com_A 2 LETVQLRNPP--RRQLKKLDEDSLTKQPEEVFDVL--EKLGEGSYGSVYKAIHKETGQIVAIKQVPVESD------LQ-- 69 (314)
T ss_dssp ------------------------------CEEEE--EECC----CEEEEEEETTTCCEEEEEEEETTSC------CH--
T ss_pred ccccccCCCC--ccchhhcCchhhhhcchhhhhhh--eeeccCCCeEEEEEEECCCCCEEEEEecCchHH------HH--
Confidence 6778888887 45666777777777777766644 57999999999999985 699999998754211 00
Q ss_pred HHHHHHHHhhCCCCCCchhHHHHhhhcccccCcHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceee---e-cCC
Q 002031 166 KSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVI---Q-SSE 241 (977)
Q Consensus 166 ~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~---~-~~~ 241 (977)
++.+|+..+.++.+ ..|++++ . ...
T Consensus 70 -------------------------------~~~~e~~~l~~l~h--------------------~~i~~~~~~~~~~~~ 98 (314)
T 3com_A 70 -------------------------------EIIKEISIMQQCDS--------------------PHVVKYYGSYFKNTD 98 (314)
T ss_dssp -------------------------------HHHHHHHHHHTCCC--------------------TTBCCEEEEEEETTE
T ss_pred -------------------------------HHHHHHHHHHhCCC--------------------CCCccEEEEEEeCCE
Confidence 12334444433311 1223333 2 455
Q ss_pred ceEEeeccCCCCCCChHHHHhcCCCHHHHHHHHHHHH--HHHHHhcCccccCCCCCCeEEccCCCCceEEEecccccccC
Q 002031 242 TVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 319 (977)
Q Consensus 242 ~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~ 319 (977)
.++||||++|.+|.++.......++...+...+.+++ +..+|..|++|+|+||.||+++.+ ++++|+|||++..+.
T Consensus 99 ~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~H~dl~p~Nil~~~~--~~~kl~dfg~~~~~~ 176 (314)
T 3com_A 99 LWIVMEYCGAGSVSDIIRLRNKTLTEDEIATILQSTLKGLEYLHFMRKIHRDIKAGNILLNTE--GHAKLADFGVAGQLT 176 (314)
T ss_dssp EEEEEECCTTEEHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTT--CCEEECCCTTCEECB
T ss_pred EEEEeecCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCCcCCCcCHHHEEECCC--CCEEEeecccchhhh
Confidence 6899999999999887654455567766666665554 888999999999999999999865 899999999997764
Q ss_pred H
Q 002031 320 S 320 (977)
Q Consensus 320 ~ 320 (977)
.
T Consensus 177 ~ 177 (314)
T 3com_A 177 D 177 (314)
T ss_dssp T
T ss_pred h
Confidence 3
|
| >2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.51 E-value=1.9e-14 Score=163.96 Aligned_cols=149 Identities=15% Similarity=0.228 Sum_probs=97.0
Q ss_pred hhcccccCccccccccccEEEEEEe-cCCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcc
Q 002031 115 GGMFMDFVETPLATASIAQVHRATL-VDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAP 193 (977)
Q Consensus 115 ~~~f~~~d~~piasaSigqV~~A~l-~~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~ 193 (977)
...|.....+.||+|++|+||+|+. .+|+.||||+.+..-... .
T Consensus 86 ~~~~~~~~~~~lG~G~~g~Vy~a~~~~~g~~vavK~~~~~~~~~----~------------------------------- 130 (373)
T 2x4f_A 86 NSFYTVSKTEILGGGRFGQVHKCEETATGLKLAAKIIKTRGMKD----K------------------------------- 130 (373)
T ss_dssp GGTEEEEEEEECC-----CEEEEEETTTCCEEEEEEEECCSHHH----H-------------------------------
T ss_pred ccceeeecceEEecCcCEEEEEEEEcCCCcEEEEEEEccccccc----H-------------------------------
Confidence 3334433457899999999999997 479999999987532110 0
Q ss_pred cccCcHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceee---e-cCCceEEeeccCCCCCCChHHHHhcCCCHHH
Q 002031 194 KELDFNSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVI---Q-SSETVLILEFMDGIRLNDCESLEAFGVNKQK 269 (977)
Q Consensus 194 ~Eld~~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~---~-~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~ 269 (977)
-.+.+|++.+.++.+ + .|++++ . ....+|||||++|.+|.+........++...
T Consensus 131 --~~~~~E~~~l~~l~h------------------p--nIv~~~~~~~~~~~~~lv~E~~~~~~L~~~l~~~~~~l~~~~ 188 (373)
T 2x4f_A 131 --EEVKNEISVMNQLDH------------------A--NLIQLYDAFESKNDIVLVMEYVDGGELFDRIIDESYNLTELD 188 (373)
T ss_dssp --HHHHHHHHHHTTCCC------------------T--TBCCEEEEEECSSEEEEEEECCTTCEEHHHHHHTGGGCCHHH
T ss_pred --HHHHHHHHHHHhCCC------------------C--CCCeEEEEEEECCEEEEEEeCCCCCcHHHHHHhcCCCCCHHH
Confidence 023345554443321 1 133333 2 4556899999999999776443333456555
Q ss_pred HHHHHHHHH--HHHHHhcCccccCCCCCCeEEccCCCCceEEEecccccccCH
Q 002031 270 VVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 320 (977)
Q Consensus 270 l~~~l~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 320 (977)
+...+.+++ +..+|..|++|+||||+|||+..+.+++++|+|||++..+..
T Consensus 189 ~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~~~kl~DFG~a~~~~~ 241 (373)
T 2x4f_A 189 TILFMKQICEGIRHMHQMYILHLDLKPENILCVNRDAKQIKIIDFGLARRYKP 241 (373)
T ss_dssp HHHHHHHHHHHHHHHHHTTEECCCCCGGGEEEEETTTTEEEECCCSSCEECCT
T ss_pred HHHHHHHHHHHHHHHHHCCcccccCCHHHEEEecCCCCcEEEEeCCCceecCC
Confidence 555555544 888999999999999999999644458899999999987654
|
| >4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A* | Back alignment and structure |
|---|
Probab=99.50 E-value=9.3e-15 Score=175.41 Aligned_cols=146 Identities=18% Similarity=0.253 Sum_probs=93.8
Q ss_pred cccccccEEEEEEe-cCCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCcHHHHHH
Q 002031 126 LATASIAQVHRATL-VDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEAEN 204 (977)
Q Consensus 126 iasaSigqV~~A~l-~~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea~n 204 (977)
..+++.|+++.++. ..|+.|+||+...........+-+ .+. .--+|++|++-
T Consensus 242 ~~~~~~~~h~~~rr~~fg~~~~~K~~~~~~~~~~~~~~~-------------------------~~~--~~~~~~~E~~~ 294 (569)
T 4azs_A 242 PYAGAGLAHKRSRRYFFGEDYVCKFFYYDMPHGILTAEE-------------------------SQR--NKYELHNEIKF 294 (569)
T ss_dssp -C--------CCEEEEECSSEEEEEEESSCSTTCSCHHH-------------------------HHH--HHHHHHHHHHH
T ss_pred cccCCcccccccccccccceeEEEEEecccccccchhhh-------------------------hHH--HHHHHHHHHHH
Confidence 45667777776654 379999999986543221110000 000 00035667666
Q ss_pred HHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeee----cCCceEEeeccCCCCCCChHHHHhcCCCHHHHHHHHHHHHHH
Q 002031 205 TRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ----SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAYAH 280 (977)
Q Consensus 205 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~----~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~l~ 280 (977)
+.++.+ ...||+++. ....+||||||+|.+|.+... +....+..+++..++.. +.
T Consensus 295 l~~~~~-------------------~~~i~~~~~~~ed~~~~yLVMEyv~G~~L~d~i~-~~~~l~~~~I~~QIl~A-L~ 353 (569)
T 4azs_A 295 LTQPPA-------------------GFDAPAVLAHGENAQSGWLVMEKLPGRLLSDMLA-AGEEIDREKILGSLLRS-LA 353 (569)
T ss_dssp HHSCCT-------------------TCCCCCEEEEEECSSEEEEEEECCCSEEHHHHHH-TTCCCCHHHHHHHHHHH-HH
T ss_pred HHhcCC-------------------CCCeeEEEEEEEECCEEEEEEecCCCCcHHHHHH-hCCCCCHHHHHHHHHHH-HH
Confidence 655422 356777764 456799999999999998753 23346677777666664 78
Q ss_pred HHHhcCccccCCCCCCeEEccCCCCceEEEecccccccCHH
Q 002031 281 QIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSSS 321 (977)
Q Consensus 281 ~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~~ 321 (977)
.+|..||+||||||+|||++.+ |+++|+|||+++.+...
T Consensus 354 ylH~~GIIHRDIKPeNILL~~d--g~vKL~DFGlAr~~~~~ 392 (569)
T 4azs_A 354 ALEKQGFWHDDVRPWNVMVDAR--QHARLIDFGSIVTTPQD 392 (569)
T ss_dssp HHHHTTCEESCCCGGGEEECTT--SCEEECCCTTEESCC--
T ss_pred HHHHCCceeccCchHhEEECCC--CCEEEeecccCeeCCCC
Confidence 9999999999999999999865 89999999999887653
|
| >2vuw_A Serine/threonine-protein kinase haspin; cell cycle, transferase, CAsp8, nucleotide binding; HET: MSE 5ID MPD; 1.80A {Homo sapiens} PDB: 3f2n_A* 3e7v_A* 3dlz_A* 3fmd_A* 3iq7_A* 2wb8_A | Back alignment and structure |
|---|
Probab=99.50 E-value=4.1e-14 Score=158.43 Aligned_cols=80 Identities=16% Similarity=0.084 Sum_probs=59.9
Q ss_pred cCCceEEeeccCCCCCCChHHHHhcCCCHHHHHHHHHHHH--HHHHH-hcCccccCCCCCCeEEccCCC-----------
Q 002031 239 SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--AHQIY-VDGFFNGDPHPGNFLVSKDPP----------- 304 (977)
Q Consensus 239 ~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~--l~~i~-~~G~~H~D~hPgNIlv~~~~~----------- 304 (977)
....+|||||++|+++.+.. ....++...+...+.+++ +..+| ..|++||||||+|||++.++.
T Consensus 134 ~~~~~lv~E~~~~g~ll~~~--~~~~~~~~~~~~i~~qi~~aL~~lH~~~~ivHrDlKp~NILl~~~~~~~~~~~~~~~~ 211 (336)
T 2vuw_A 134 DDQLFIVLEFEFGGIDLEQM--RTKLSSLATAKSILHQLTASLAVAEASLRFEHRDLHWGNVLLKKTSLKKLHYTLNGKS 211 (336)
T ss_dssp TTCEEEEEEEECCCEETGGG--TTTCCCHHHHHHHHHHHHHHHHHHHHHHCCBCSCCCGGGEEEEECSCSEEEEEETTEE
T ss_pred cCeEEEEEEecCCCccHHHH--HhcCCCHHHHHHHHHHHHHHHHHHHHhCCEeECCCCHHHEEEeccCCcceeeeccCcc
Confidence 45568999999988654432 223456666666555555 88899 899999999999999997620
Q ss_pred -------CceEEEecccccccCH
Q 002031 305 -------HRPILLDFGLTKKLSS 320 (977)
Q Consensus 305 -------g~i~LiDFG~~~~l~~ 320 (977)
..++|+|||+++.+..
T Consensus 212 ~~~~~~~~~vkL~DFG~a~~~~~ 234 (336)
T 2vuw_A 212 STIPSCGLQVSIIDYTLSRLERD 234 (336)
T ss_dssp EEEECTTEEEEECCCTTCBEEET
T ss_pred ccccCCCceEEEeeccccEecCC
Confidence 1899999999988754
|
| >3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} SCOP: d.144.1.7 PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A* | Back alignment and structure |
|---|
Probab=99.49 E-value=6.4e-14 Score=154.19 Aligned_cols=139 Identities=14% Similarity=0.158 Sum_probs=97.7
Q ss_pred cccccccccEEEEEEe-cCCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCcHHHH
Q 002031 124 TPLATASIAQVHRATL-VDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (977)
Q Consensus 124 ~piasaSigqV~~A~l-~~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea 202 (977)
+.||.|++|.||+|+. .+|+.||||+....-... +-.+.+|+
T Consensus 26 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~-------------------------------------~~~~~~E~ 68 (297)
T 3fxz_A 26 EKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPK-------------------------------------KELIINEI 68 (297)
T ss_dssp EEEEEETTEEEEEEEBTTTCCEEEEEEEEGGGCSC-------------------------------------HHHHHHHH
T ss_pred eeeccCCCeEEEEEEECCCCcEEEEEEeecccccH-------------------------------------HHHHHHHH
Confidence 5799999999999996 589999999875322110 00123444
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeee-cCCceEEeeccCCCCCCChHHHHhcCCCHHHHHHHHHHHH--H
Q 002031 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--A 279 (977)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~--l 279 (977)
..+.++.+ ..-+.+-..+. ....++||||++|.+|.++. ....++...+...+.+++ +
T Consensus 69 ~~l~~l~h-----------------p~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~--~~~~~~~~~~~~~~~qi~~~l 129 (297)
T 3fxz_A 69 LVMRENKN-----------------PNIVNYLDSYLVGDELWVVMEYLAGGSLTDVV--TETCMDEGQIAAVCRECLQAL 129 (297)
T ss_dssp HHHHHCCC-----------------TTBCCEEEEEEETTEEEEEEECCTTCBHHHHH--HHSCCCHHHHHHHHHHHHHHH
T ss_pred HHHhcCCC-----------------CCCCeEeEEEEECCEEEEEEECCCCCCHHHHH--hhcCCCHHHHHHHHHHHHHHH
Confidence 44443321 11112222222 45678999999999998774 445677666666665554 8
Q ss_pred HHHHhcCccccCCCCCCeEEccCCCCceEEEecccccccCH
Q 002031 280 HQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 320 (977)
Q Consensus 280 ~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 320 (977)
..+|..|++|+|+||.|||++.+ +.++|+|||++..++.
T Consensus 130 ~~lH~~~i~H~Dlkp~Nil~~~~--~~~kl~Dfg~~~~~~~ 168 (297)
T 3fxz_A 130 EFLHSNQVIHRDIKSDNILLGMD--GSVKLTDFGFCAQITP 168 (297)
T ss_dssp HHHHHTTEECCCCSGGGEEECTT--CCEEECCCTTCEECCS
T ss_pred HHHHhCCceeCCCCHHHEEECCC--CCEEEeeCCCceecCC
Confidence 88999999999999999999865 8999999999877654
|
| >3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.47 E-value=6.1e-14 Score=158.98 Aligned_cols=141 Identities=19% Similarity=0.174 Sum_probs=95.1
Q ss_pred cccccccccEEEEEE------ecCCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccC
Q 002031 124 TPLATASIAQVHRAT------LVDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELD 197 (977)
Q Consensus 124 ~piasaSigqV~~A~------l~~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld 197 (977)
+.||.|++|.||+|+ ..+|+.||||+.++.....+.
T Consensus 71 ~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~-------------------------------------- 112 (365)
T 3e7e_A 71 HLLGEGAFAQVYEATQGDLNDAKNKQKFVLKVQKPANPWEFY-------------------------------------- 112 (365)
T ss_dssp EEEEECSSEEEEEEEC-------CCCCEEEEEESSCCHHHHH--------------------------------------
T ss_pred EEeeccCCEEEEEEEecCCcccccCcEEEEEEeCCCChhHHH--------------------------------------
Confidence 469999999999994 347999999998875433222
Q ss_pred cHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeee-cCCceEEeeccCCCCCCChHHHH----hcCCCHHHHHH
Q 002031 198 FNSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLE----AFGVNKQKVVE 272 (977)
Q Consensus 198 ~~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLVmE~i~G~~L~~~~~~~----~~~~~~~~l~~ 272 (977)
.|.+.+.++..... ...+.+-..+. ....+|||||++|.+|.++.... ...++...+..
T Consensus 113 --~e~~~~~~l~~~~~--------------~~iv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~ 176 (365)
T 3e7e_A 113 --IGTQLMERLKPSMQ--------------HMFMKFYSAHLFQNGSVLVGELYSYGTLLNAINLYKNTPEKVMPQGLVIS 176 (365)
T ss_dssp --HHHHHHHHSCGGGG--------------GGBCCEEEEEECSSCEEEEECCCCSCBHHHHHHHHHTSTTCSCCHHHHHH
T ss_pred --HHHHHHHHhhhhhh--------------hhhhhhheeeecCCCcEEEEeccCCCcHHHHHHHhhcccccCCCHHHHHH
Confidence 23333333321110 00111112222 46679999999999998875432 23466666666
Q ss_pred HHHHHH--HHHHHhcCccccCCCCCCeEEcc---------CCCCceEEEeccccccc
Q 002031 273 EITRAY--AHQIYVDGFFNGDPHPGNFLVSK---------DPPHRPILLDFGLTKKL 318 (977)
Q Consensus 273 ~l~~~~--l~~i~~~G~~H~D~hPgNIlv~~---------~~~g~i~LiDFG~~~~l 318 (977)
.+.+++ +..+|..|++|||+||.|||++. +.++.++|+|||++..+
T Consensus 177 i~~qi~~~L~~lH~~~ivHrDiKp~NIll~~~~~~~~~~~~~~~~~kl~DFG~a~~~ 233 (365)
T 3e7e_A 177 FAMRMLYMIEQVHDCEIIHGDIKPDNFILGNGFLEQDDEDDLSAGLALIDLGQSIDM 233 (365)
T ss_dssp HHHHHHHHHHHHHTTTEECCCCSGGGEEECGGGTCC------CTTEEECCCTTCEEG
T ss_pred HHHHHHHHHHHHhhCCeecCCCCHHHEEecccccCccccccccCCEEEeeCchhhhh
Confidence 666655 88999999999999999999986 01389999999999654
|
| >4hcu_A Tyrosine-protein kinase ITK/TSK; transferase-transferase inhibitor complex; HET: 13L; 1.43A {Homo sapiens} PDB: 4hct_A* 4hcv_A* 3t9t_A* 1sm2_A* 1snu_A* 1snx_A 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A* | Back alignment and structure |
|---|
Probab=99.47 E-value=5.1e-14 Score=152.18 Aligned_cols=138 Identities=18% Similarity=0.195 Sum_probs=100.6
Q ss_pred cccccccccEEEEEEecCCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCcHHHHH
Q 002031 124 TPLATASIAQVHRATLVDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEAE 203 (977)
Q Consensus 124 ~piasaSigqV~~A~l~~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea~ 203 (977)
+.||+|++|.||+|+..+++.||||+.+.+.... -++.+|++
T Consensus 16 ~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~--------------------------------------~~~~~E~~ 57 (269)
T 4hcu_A 16 QEIGSGQFGLVHLGYWLNKDKVAIKTIREGAMSE--------------------------------------EDFIEEAE 57 (269)
T ss_dssp EEEEECSSCEEEEEEETTTEEEEEEEECTTSBCH--------------------------------------HHHHHHHH
T ss_pred heecCCCccEEEEEEecCCCeEEEEEecccccCH--------------------------------------HHHHHHHH
Confidence 6799999999999999889999999987542210 02445555
Q ss_pred HHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeee----cCCceEEeeccCCCCCCChHHHHhcCCCHHHHHHHHHHHH-
Q 002031 204 NTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ----SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY- 278 (977)
Q Consensus 204 n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~----~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~- 278 (977)
.+.++.+ -.|++++. ....++||||++|.+|.++.......++...+...+.+++
T Consensus 58 ~l~~l~h--------------------~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~ 117 (269)
T 4hcu_A 58 VMMKLSH--------------------PKLVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCE 117 (269)
T ss_dssp HHHTCCC--------------------TTBCCEEEEECSSSSEEEEEECCTTCBHHHHHHTTTTCCCHHHHHHHHHHHHH
T ss_pred HHHhCCC--------------------CCEeeEEEEEecCCceEEEEEeCCCCcHHHHHHhcCcccCHHHHHHHHHHHHH
Confidence 5554421 12333332 3556899999999999877533333456666666555554
Q ss_pred -HHHHHhcCccccCCCCCCeEEccCCCCceEEEecccccccCHH
Q 002031 279 -AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSSS 321 (977)
Q Consensus 279 -l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~~ 321 (977)
+..+|..|++|+|+||.||+++.+ +.++|+|||++..+...
T Consensus 118 ~l~~lH~~~i~H~dikp~Nil~~~~--~~~kl~Dfg~~~~~~~~ 159 (269)
T 4hcu_A 118 GMAYLEEACVIHRDLAARNCLVGEN--QVIKVSDFGMTRFVLDD 159 (269)
T ss_dssp HHHHHHHTTCCCSCCCGGGEEECGG--GCEEECCTTGGGGBCCH
T ss_pred HHHHHHhCCeecCCcchheEEEcCC--CCEEecccccccccccc
Confidence 889999999999999999999865 88999999999877554
|
| >3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A | Back alignment and structure |
|---|
Probab=99.46 E-value=7e-14 Score=152.18 Aligned_cols=138 Identities=18% Similarity=0.181 Sum_probs=98.1
Q ss_pred cccccccccEEEEEEecCCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCcHHHHH
Q 002031 124 TPLATASIAQVHRATLVDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEAE 203 (977)
Q Consensus 124 ~piasaSigqV~~A~l~~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea~ 203 (977)
+.||+|++|.||+|+.++++.||||+.++..... -++.+|++
T Consensus 30 ~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~--------------------------------------~~~~~E~~ 71 (283)
T 3gen_A 30 KELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSE--------------------------------------DEFIEEAK 71 (283)
T ss_dssp EECC---CEEEEEEEETTTEEEEEEEECTTSBCH--------------------------------------HHHHHHHH
T ss_pred hhcCCCCCceEEEEEEcCCCeEEEEEecCCCCCH--------------------------------------HHHHHHHH
Confidence 6899999999999999888999999987542110 02344555
Q ss_pred HHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeee----cCCceEEeeccCCCCCCChHHHHhcCCCHHHHHHHHHHHH-
Q 002031 204 NTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ----SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY- 278 (977)
Q Consensus 204 n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~----~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~- 278 (977)
.+.++.+ ..|++++. ....++||||++|.+|.++.......++...+...+.+++
T Consensus 72 ~l~~l~h--------------------~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~ 131 (283)
T 3gen_A 72 VMMNLSH--------------------EKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCE 131 (283)
T ss_dssp HHHTCCC--------------------TTBCCEEEEECSSSSEEEEECCCTTCBHHHHHHCGGGCCCHHHHHHHHHHHHH
T ss_pred HHhcCCC--------------------CCEeeEEEEEecCCCeEEEEeccCCCcHHHHHHHhccCCCHHHHHHHHHHHHH
Confidence 5444321 12333332 3456899999999999887543334567776666666655
Q ss_pred -HHHHHhcCccccCCCCCCeEEccCCCCceEEEecccccccCHH
Q 002031 279 -AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSSS 321 (977)
Q Consensus 279 -l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~~ 321 (977)
+..+|..|++|+|+||.||+++.+ ++++|+|||++..+...
T Consensus 132 ~l~~lH~~~i~H~dikp~Nili~~~--~~~kl~Dfg~~~~~~~~ 173 (283)
T 3gen_A 132 AMEYLESKQFLHRDLAARNCLVNDQ--GVVKVSDFGLSRYVLDD 173 (283)
T ss_dssp HHHHHHHTTCCCSSCSGGGEEECTT--SCEEECSTTGGGGBCCH
T ss_pred HHHHHHHCCccCCCCccceEEEcCC--CCEEEcccccccccccc
Confidence 889999999999999999999865 89999999999877553
|
| >3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} SCOP: d.144.1.7 PDB: 3sxr_A* | Back alignment and structure |
|---|
Probab=99.46 E-value=7.6e-14 Score=150.62 Aligned_cols=137 Identities=18% Similarity=0.188 Sum_probs=100.8
Q ss_pred cccccccccEEEEEEecCCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCcHHHHH
Q 002031 124 TPLATASIAQVHRATLVDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEAE 203 (977)
Q Consensus 124 ~piasaSigqV~~A~l~~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea~ 203 (977)
+.||+|++|.||+|+.++++.||||+.+.+.... -++.+|++
T Consensus 14 ~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~--------------------------------------~~~~~E~~ 55 (268)
T 3sxs_A 14 KELGSGQFGVVKLGKWKGQYDVAVKMIKEGSMSE--------------------------------------DEFFQEAQ 55 (268)
T ss_dssp EEEEEETTEEEEEEEETTTEEEEEEEECBTTBCH--------------------------------------HHHHHHHH
T ss_pred eeeccCCCceEEEEEecCceeEEEEEeccCCCcH--------------------------------------HHHHHHHH
Confidence 6799999999999999888899999986542110 02345555
Q ss_pred HHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeee----cCCceEEeeccCCCCCCChHHHHhcCCCHHHHHHHHHHHH-
Q 002031 204 NTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ----SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY- 278 (977)
Q Consensus 204 n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~----~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~- 278 (977)
.+.++.+ ..|++++. ....++||||++|.+|.++.......++...+...+.+++
T Consensus 56 ~l~~l~h--------------------~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~ 115 (268)
T 3sxs_A 56 TMMKLSH--------------------PKLVKFYGVCSKEYPIYIVTEYISNGCLLNYLRSHGKGLEPSQLLEMCYDVCE 115 (268)
T ss_dssp HHHHCCC--------------------TTBCCEEEEECSSSSEEEEEECCTTCBHHHHHHHHGGGCCHHHHHHHHHHHHH
T ss_pred HHHhCCC--------------------CCEeeEEEEEccCCceEEEEEccCCCcHHHHHHHcCCCCCHHHHHHHHHHHHH
Confidence 5555421 11233332 3456899999999999887654444567776666666655
Q ss_pred -HHHHHhcCccccCCCCCCeEEccCCCCceEEEecccccccCH
Q 002031 279 -AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 320 (977)
Q Consensus 279 -l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 320 (977)
+..+|..|++|+|+||+||+++.+ +.++|+|||++..+..
T Consensus 116 ~l~~lH~~~i~H~dikp~Nil~~~~--~~~~l~Dfg~~~~~~~ 156 (268)
T 3sxs_A 116 GMAFLESHQFIHRDLAARNCLVDRD--LCVKVSDFGMTRYVLD 156 (268)
T ss_dssp HHHHHHHTTEEESSCSGGGEEECTT--CCEEECCTTCEEECCT
T ss_pred HHHHHHHCCeecCCcCcceEEECCC--CCEEEccCccceecch
Confidence 888999999999999999999865 8999999999876543
|
| >3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.46 E-value=1e-13 Score=153.22 Aligned_cols=141 Identities=16% Similarity=0.127 Sum_probs=98.6
Q ss_pred ccccccccccEEEEEEec-CCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCcHHH
Q 002031 123 ETPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSE 201 (977)
Q Consensus 123 ~~piasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~E 201 (977)
.+.||.|++|.||+|+.+ +|+.||||+....-.... -.|.+|
T Consensus 15 ~~~lG~G~~g~V~~~~~~~~~~~va~K~~~~~~~~~~-------------------------------------~~~~~E 57 (310)
T 3s95_A 15 GEVLGKGCFGQAIKVTHRETGEVMVMKELIRFDEETQ-------------------------------------RTFLKE 57 (310)
T ss_dssp EEEEECCSSEEEEEEEETTTCCEEEEEEESCCCHHHH-------------------------------------HHHHHH
T ss_pred cceecCCCCEEEEEEEECCCCcEEEEEEeccCCHHHH-------------------------------------HHHHHH
Confidence 368999999999999984 799999998754211100 023445
Q ss_pred HHHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceee---e-cCCceEEeeccCCCCCCChHHHHhcCCCHHHHHHHHHHH
Q 002031 202 AENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVI---Q-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRA 277 (977)
Q Consensus 202 a~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~---~-~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~ 277 (977)
++.+.++.+ -.|++++ . ....++||||++|.+|.++.......++...+...+.++
T Consensus 58 ~~~l~~l~h--------------------p~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi 117 (310)
T 3s95_A 58 VKVMRCLEH--------------------PNVLKFIGVLYKDKRLNFITEYIKGGTLRGIIKSMDSQYPWSQRVSFAKDI 117 (310)
T ss_dssp HHHHTTCCC--------------------TTBCCEEEEEEETTEEEEEEECCTTCBHHHHHHHCCTTSCHHHHHHHHHHH
T ss_pred HHHHHhCCC--------------------cCcccEEEEEecCCeeEEEEEecCCCcHHHHHHhccCCCCHHHHHHHHHHH
Confidence 555443321 1233333 2 455789999999999988754323445666665555555
Q ss_pred H--HHHHHhcCccccCCCCCCeEEccCCCCceEEEecccccccCHHH
Q 002031 278 Y--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSSSM 322 (977)
Q Consensus 278 ~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~~~ 322 (977)
+ +..+|..|++|+|+||+||+++.+ +.++|+|||++..+....
T Consensus 118 ~~al~~lH~~~ivH~dlkp~Nil~~~~--~~~kl~Dfg~~~~~~~~~ 162 (310)
T 3s95_A 118 ASGMAYLHSMNIIHRDLNSHNCLVREN--KNVVVADFGLARLMVDEK 162 (310)
T ss_dssp HHHHHHHHHTTEECSCCSTTSEEECTT--SCEEECCCTTCEECC---
T ss_pred HHHHHHHHhCCccCCCCCcCeEEECCC--CCEEEeecccceeccccc
Confidence 4 889999999999999999999865 899999999998876543
|
| >2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ... | Back alignment and structure |
|---|
Probab=99.46 E-value=4.1e-14 Score=161.14 Aligned_cols=174 Identities=18% Similarity=0.230 Sum_probs=98.5
Q ss_pred HHHHHhCCCCCCHHHHHHHHHHHhCCChhhcccccC-ccccccccccEEEEEEec----CCCEEEEEEecCChhhhhHhh
Q 002031 87 LKQLQDSLPPRPVQEVSQTIEREFGESMGGMFMDFV-ETPLATASIAQVHRATLV----DGRQVVVKVQHQGIKTIILED 161 (977)
Q Consensus 87 L~~Lqd~~p~~~~~~v~~~l~~elg~~~~~~f~~~d-~~piasaSigqV~~A~l~----~G~~VAVKv~~p~i~~~~~~D 161 (977)
+..++..+.|..+++-.+.+. ++.+.+.. ..|+ .+.||+|++|.||+|+++ +++.||||+.+.+......
T Consensus 16 ~~~~~~~~~p~~~~~~~~~~~-~~~~~~~~--~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~-- 90 (373)
T 2qol_A 16 LPGLRTFVDPHTFEDPTQTVH-EFAKELDA--TNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQR-- 90 (373)
T ss_dssp -----CCC-----------CT-TTSCBCCG--GGCCCCEEEEECSSSEEEEC-CBCTTSCBCCEEEEECCTTCCHHHH--
T ss_pred ccccccccCccccCCHHHHHH-HHHhhcCH--hhceeeeEEeeCCCeEEEEEEEecCCCCceeEEEEEecCccCHHHH--
Confidence 345556666666655433322 23322221 1222 368999999999999975 5788999998764321110
Q ss_pred HHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCcHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeee---
Q 002031 162 LKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ--- 238 (977)
Q Consensus 162 l~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~--- 238 (977)
-+|.+|+..+.++.+ -.|++++.
T Consensus 91 ----------------------------------~~~~~E~~~l~~l~h--------------------~niv~~~~~~~ 116 (373)
T 2qol_A 91 ----------------------------------RDFLGEASIMGQFDH--------------------PNIIRLEGVVT 116 (373)
T ss_dssp ----------------------------------HHHHHHHHHHTTCCC--------------------TTBCCEEEEEC
T ss_pred ----------------------------------HHHHHHHHHHHhCCC--------------------CCCCeEEEEEe
Confidence 024455555444321 12333332
Q ss_pred -cCCceEEeeccCCCCCCChHHHHhcCCCHHHHHHHHHHHH--HHHHHhcCccccCCCCCCeEEccCCCCceEEEecccc
Q 002031 239 -SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLT 315 (977)
Q Consensus 239 -~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~ 315 (977)
....+|||||++|.+|.++.......++...+...+.++. +..+|..|++|+|+||.|||++.+ +.++|+|||++
T Consensus 117 ~~~~~~lv~e~~~~~sL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~--~~~kl~Dfg~a 194 (373)
T 2qol_A 117 KSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSN--LVCKVSDFGLG 194 (373)
T ss_dssp SSSSCEEEEECCTTCBHHHHHHTTTTCSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTT--CCEEECCC---
T ss_pred eCCceEEEEeCCCCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeCCCCCcceEEEcCC--CCEEECcCccc
Confidence 4556899999999999887543233466666666665554 888999999999999999999865 89999999999
Q ss_pred cccCHH
Q 002031 316 KKLSSS 321 (977)
Q Consensus 316 ~~l~~~ 321 (977)
..+...
T Consensus 195 ~~~~~~ 200 (373)
T 2qol_A 195 RVLEDD 200 (373)
T ss_dssp ------
T ss_pred cccccC
Confidence 877543
|
| >3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 4e4m_A* 4f08_A* 4f09_A* 3q32_A* 3rvg_A* 4hge_A* 3tjc_A* 3tjd_A* 4bbe_A* 4bbf_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* ... | Back alignment and structure |
|---|
Probab=99.46 E-value=8.6e-14 Score=152.53 Aligned_cols=142 Identities=21% Similarity=0.251 Sum_probs=96.4
Q ss_pred cccccccccEEEEEEe-----cCCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCc
Q 002031 124 TPLATASIAQVHRATL-----VDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDF 198 (977)
Q Consensus 124 ~piasaSigqV~~A~l-----~~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~ 198 (977)
+.||.|++|.||+|+. .+|+.||||+.+........ ++
T Consensus 16 ~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~-------------------------------------~~ 58 (295)
T 3ugc_A 16 QQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLR-------------------------------------DF 58 (295)
T ss_dssp EEEEECSSEEEEEEEECTTCSSCCEEEEEEEESCCCHHHHH-------------------------------------HH
T ss_pred heeeccCCEEEEEEEEecccCCCCcEEEEEEcccCCHHHHH-------------------------------------HH
Confidence 6799999999999984 37899999988654321110 23
Q ss_pred HHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeee---cCCceEEeeccCCCCCCChHHHHhcCCCHHHHHHHHH
Q 002031 199 NSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ---SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEIT 275 (977)
Q Consensus 199 ~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~---~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~ 275 (977)
.+|++.+.++.+ ..-+.+-.++. ....++||||++|.+|.++.......++...+...+.
T Consensus 59 ~~E~~~l~~l~h-----------------~~iv~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~ 121 (295)
T 3ugc_A 59 EREIEILKSLQH-----------------DNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTS 121 (295)
T ss_dssp HHHHHHHHTCCC-----------------TTBCCEEEEECHHHHTSCEEEEECCTTCBHHHHHHHCGGGCCHHHHHHHHH
T ss_pred HHHHHHHHhCCC-----------------CCEeeEEEEEecCCCCceEEEEEeCCCCCHHHHHHhcccccCHHHHHHHHH
Confidence 345555444421 01122222222 2446899999999999887543333466666666555
Q ss_pred HHH--HHHHHhcCccccCCCCCCeEEccCCCCceEEEecccccccCHH
Q 002031 276 RAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSSS 321 (977)
Q Consensus 276 ~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~~ 321 (977)
+++ +..+|..|++|+|+||+||+++.+ ++++|+|||++..+...
T Consensus 122 qi~~~l~~lH~~~ivH~Dikp~Nil~~~~--~~~kl~Dfg~~~~~~~~ 167 (295)
T 3ugc_A 122 QICKGMEYLGTKRYIHRDLATRNILVENE--NRVKIGDFGLTKVLPQD 167 (295)
T ss_dssp HHHHHHHHHHHTTCCCSCCSGGGEEEEET--TEEEECCCCSCC-----
T ss_pred HHHHHHHHHhcCCcccCCCCHhhEEEcCC--CeEEEccCcccccccCC
Confidence 554 888999999999999999999966 89999999999877543
|
| >2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.45 E-value=1.1e-13 Score=159.64 Aligned_cols=141 Identities=16% Similarity=0.141 Sum_probs=97.9
Q ss_pred cccccccccEEEEEEec-CCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCcHHHH
Q 002031 124 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (977)
Q Consensus 124 ~piasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea 202 (977)
+.||.|++|+||+|+.+ +|+.||||+.+.... ... ...-.+.+|.
T Consensus 67 ~~lG~G~fG~V~~~~~~~~~~~vAiK~l~k~~~--~~~--------------------------------~~~~~~~~E~ 112 (412)
T 2vd5_A 67 KVIGRGAFSEVAVVKMKQTGQVYAMKIMNKWDM--LKR--------------------------------GEVSCFREER 112 (412)
T ss_dssp EEEEECSSCEEEEEEETTTCCEEEEEEEEHHHH--HHH--------------------------------GGGCCHHHHH
T ss_pred EEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHh--hhH--------------------------------HHHHHHHHHH
Confidence 67999999999999985 799999999753110 000 0111345555
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceee---e-cCCceEEeeccCCCCCCChHHHHhcCCCHHHHHHHHHHHH
Q 002031 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVI---Q-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY 278 (977)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~---~-~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~ 278 (977)
..+..+.+ ..|.+++ . ....+|||||++|.+|.++.......++...+...+.+++
T Consensus 113 ~il~~~~h--------------------p~Iv~l~~~~~~~~~~~lVmE~~~gg~L~~~l~~~~~~l~~~~~~~~~~qi~ 172 (412)
T 2vd5_A 113 DVLVNGDR--------------------RWITQLHFAFQDENYLYLVMEYYVGGDLLTLLSKFGERIPAEMARFYLAEIV 172 (412)
T ss_dssp HHHHHSCT--------------------TTBCCEEEEEECSSEEEEEECCCCSCBHHHHHHHHSSCCCHHHHHHHHHHHH
T ss_pred HHHHhcCC--------------------CCeeeEEEEEeeCCEEEEEEcCCCCCcHHHHHHhcCCCCCHHHHHHHHHHHH
Confidence 55443321 1122332 2 3456899999999999887543223466665555555544
Q ss_pred --HHHHHhcCccccCCCCCCeEEccCCCCceEEEecccccccCH
Q 002031 279 --AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 320 (977)
Q Consensus 279 --l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 320 (977)
+..+|..|++|||+||+|||++.+ |.++|+|||++..+..
T Consensus 173 ~aL~~LH~~giiHrDLKp~NILld~~--g~vkL~DFGla~~~~~ 214 (412)
T 2vd5_A 173 MAIDSVHRLGYVHRDIKPDNILLDRC--GHIRLADFGSCLKLRA 214 (412)
T ss_dssp HHHHHHHHTTEECCCCSGGGEEECTT--SCEEECCCTTCEECCT
T ss_pred HHHHHHHHCCeeecccCHHHeeecCC--CCEEEeechhheeccC
Confidence 888999999999999999999865 8999999999987654
|
| >3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A* | Back alignment and structure |
|---|
Probab=99.45 E-value=9.1e-14 Score=158.46 Aligned_cols=138 Identities=17% Similarity=0.208 Sum_probs=100.9
Q ss_pred cccccccccEEEEEEec-CCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCcHHHH
Q 002031 124 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (977)
Q Consensus 124 ~piasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea 202 (977)
+.||+|++|.||+|+.+ +|+.||||+.++...... .-+|.+|+
T Consensus 120 ~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~------------------------------------~~~~~~E~ 163 (377)
T 3cbl_A 120 EQIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDL------------------------------------KAKFLQEA 163 (377)
T ss_dssp EEEEEETTEEEEEEEETTTCCEEEEEECCTTSCHHH------------------------------------HTTTTHHH
T ss_pred eEeccCCCCeEEEEEEecCCeEEEEEEccccCCHHH------------------------------------HHHHHHHH
Confidence 68999999999999985 799999999875432110 01355666
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeee----cCCceEEeeccCCCCCCChHHHHhcCCCHHHHHHHHHHHH
Q 002031 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ----SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY 278 (977)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~----~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~ 278 (977)
+.+.++.+ ..|.+++. ....+|||||++|.+|.++.......++...+...+.++.
T Consensus 164 ~~l~~l~h--------------------pniv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~qi~ 223 (377)
T 3cbl_A 164 RILKQYSH--------------------PNIVRLIGVCTQKQPIYIVMELVQGGDFLTFLRTEGARLRVKTLLQMVGDAA 223 (377)
T ss_dssp HHHTTCCC--------------------TTBCCEEEEECSSSSCEEEEECCTTCBHHHHHHHHGGGCCHHHHHHHHHHHH
T ss_pred HHHHhCCC--------------------CCEEEEEEEEecCCCcEEEEEcCCCCCHHHHHHhcCCCCCHHHHHHHHHHHH
Confidence 66554421 12333332 3556899999999999887554444466666666666654
Q ss_pred --HHHHHhcCccccCCCCCCeEEccCCCCceEEEecccccccC
Q 002031 279 --AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 319 (977)
Q Consensus 279 --l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~ 319 (977)
+..+|..|++|||+||.|||++.+ +.++|+|||++....
T Consensus 224 ~~l~~LH~~~ivHrDlkp~Nil~~~~--~~~kl~DfG~s~~~~ 264 (377)
T 3cbl_A 224 AGMEYLESKCCIHRDLAARNCLVTEK--NVLKISDFGMSREEA 264 (377)
T ss_dssp HHHHHHHHTTEECSCCSGGGEEECTT--CCEEECCGGGCEECT
T ss_pred HHHHHHHHCCcCCcccCHHHEEEcCC--CcEEECcCCCceecC
Confidence 888999999999999999999865 899999999987643
|
| >3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus} | Back alignment and structure |
|---|
Probab=99.45 E-value=1.2e-13 Score=153.54 Aligned_cols=78 Identities=14% Similarity=0.202 Sum_probs=57.7
Q ss_pred ceEEeeccCCCCCCChHHHHh--cCCCHHHHHHHHHHHH--HHHHHhcCccccCCCCCCeEEccCCCCceEEEecccccc
Q 002031 242 TVLILEFMDGIRLNDCESLEA--FGVNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKK 317 (977)
Q Consensus 242 ~vLVmE~i~G~~L~~~~~~~~--~~~~~~~l~~~l~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~ 317 (977)
.++||||++|.+|.++..... .......+...+.+++ +..+|..|++|||+||+|||++.+ +.++|+|||++..
T Consensus 136 ~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~--~~~kL~DfG~a~~ 213 (332)
T 3qd2_B 136 LYIQMQLCRKENLKDWMNRRCSLEDREHGVCLHIFIQIAEAVEFLHSKGLMHRDLKPSNIFFTMD--DVVKVGDFGLVTA 213 (332)
T ss_dssp EEEEEECCCSSCHHHHHHTCCSGGGSCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTT--CCEEECCCTTCEE
T ss_pred EEEEEEecCCCCHHHHHhcccCccchhhHHHHHHHHHHHHHHHHHHhCCeeecCCCcccEEEeCC--CCEEEeecCcccc
Confidence 589999999999987643111 1122222333333433 788999999999999999999865 8999999999998
Q ss_pred cCHH
Q 002031 318 LSSS 321 (977)
Q Consensus 318 l~~~ 321 (977)
+...
T Consensus 214 ~~~~ 217 (332)
T 3qd2_B 214 MDQD 217 (332)
T ss_dssp CSCC
T ss_pred cccc
Confidence 8654
|
| >3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A | Back alignment and structure |
|---|
Probab=99.45 E-value=1.5e-13 Score=153.59 Aligned_cols=142 Identities=18% Similarity=0.251 Sum_probs=97.3
Q ss_pred ccccccccccEEEEEEe-cCCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCcHHH
Q 002031 123 ETPLATASIAQVHRATL-VDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSE 201 (977)
Q Consensus 123 ~~piasaSigqV~~A~l-~~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~E 201 (977)
.+.||+|++|.||+|+. .+|+.||||+........ .+. + .+.+|
T Consensus 20 ~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~--~~~---~------------------------------~~~~E 64 (328)
T 3fe3_A 20 LKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNP--TSL---Q------------------------------KLFRE 64 (328)
T ss_dssp EEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCH--HHH---H------------------------------HHHHH
T ss_pred EEEEeeCCCEEEEEEEECCCCCEEEEEEEEhhcCCH--HHH---H------------------------------HHHHH
Confidence 36899999999999997 589999999875432110 000 0 13345
Q ss_pred HHHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeee-cCCceEEeeccCCCCCCChHHHHhcCCCHHHHHHHHHHHH--
Q 002031 202 AENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY-- 278 (977)
Q Consensus 202 a~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~-- 278 (977)
++.+..+.+ ..-+.+-.++. ....+|||||++|.+|.+... ....++...+...+.+++
T Consensus 65 ~~~l~~l~h-----------------pnIv~l~~~~~~~~~~~lv~e~~~~~~L~~~l~-~~~~l~~~~~~~~~~qi~~a 126 (328)
T 3fe3_A 65 VRIMKILNH-----------------PNIVKLFEVIETEKTLYLIMEYASGGEVFDYLV-AHGRMKEKEARSKFRQIVSA 126 (328)
T ss_dssp HHHHHHCCC-----------------TTBCCEEEEEECSSEEEEEECCCTTCBHHHHHH-HHCCCCHHHHHHHHHHHHHH
T ss_pred HHHHHhCCC-----------------CCEeeEEEEEEECCEEEEEEECCCCCcHHHHHH-HcCCCCHHHHHHHHHHHHHH
Confidence 555544421 01112222222 455689999999999887643 234456655555555544
Q ss_pred HHHHHhcCccccCCCCCCeEEccCCCCceEEEecccccccC
Q 002031 279 AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 319 (977)
Q Consensus 279 l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~ 319 (977)
+..+|..|++|||+||+|||++.+ +.++|+|||++..+.
T Consensus 127 l~~lH~~~ivHrDlkp~NIll~~~--~~~kl~DFG~a~~~~ 165 (328)
T 3fe3_A 127 VQYCHQKRIVHRDLKAENLLLDAD--MNIKIADFGFSNEFT 165 (328)
T ss_dssp HHHHHHTTCCCSCCCGGGEEECTT--SCEEECSTTCCGGGS
T ss_pred HHHHHHCCEeccCCCHHHEEEcCC--CCEEEeeccCceecC
Confidence 888999999999999999999865 899999999987654
|
| >2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A* | Back alignment and structure |
|---|
Probab=99.45 E-value=1.3e-13 Score=153.14 Aligned_cols=144 Identities=20% Similarity=0.284 Sum_probs=98.2
Q ss_pred cccccC-ccccccccccEEEEEEecCCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccc
Q 002031 117 MFMDFV-ETPLATASIAQVHRATLVDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKE 195 (977)
Q Consensus 117 ~f~~~d-~~piasaSigqV~~A~l~~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~E 195 (977)
....|+ .+.||.|++|.||+|++++|+.||||+..+...... +
T Consensus 37 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~---------------------------~--------- 80 (321)
T 2qkw_B 37 ATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPESSQGI---------------------------E--------- 80 (321)
T ss_dssp CCCCCSCCCCSCBCSSSEEEEEECTTCCEEEEEECCSCCSSHH---------------------------H---------
T ss_pred HHhccCccceeecCCCeeEEEEEECCCCEEEEEEecccChHHH---------------------------H---------
Confidence 333444 368999999999999988899999998766432110 0
Q ss_pred cCcHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeee----cCCceEEeeccCCCCCCChHHHHh---cCCCHH
Q 002031 196 LDFNSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ----SSETVLILEFMDGIRLNDCESLEA---FGVNKQ 268 (977)
Q Consensus 196 ld~~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~----~~~~vLVmE~i~G~~L~~~~~~~~---~~~~~~ 268 (977)
.+.+|++.+.+++ + ..|++++. ....++||||++|.+|.++..... ..++..
T Consensus 81 -~~~~E~~~l~~l~------------------h--~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~ 139 (321)
T 2qkw_B 81 -EFETEIETLSFCR------------------H--PHLVSLIGFCDERNEMILIYKYMENGNLKRHLYGSDLPTMSMSWE 139 (321)
T ss_dssp -HHHHHHHGGGSCC------------------C--TTBCCEEEECCCTTCCEEEEECCTTCBTGGGSSSSCCCSCCCCHH
T ss_pred -HHHHHHHHHHhCC------------------C--CCEeeEEEEEcCCCeEEEEEEcCCCCcHHHHHhccCCCccccCHH
Confidence 1233433332221 1 12333332 456789999999999987642111 124555
Q ss_pred HHHHHHHHHH--HHHHHhcCccccCCCCCCeEEccCCCCceEEEecccccccC
Q 002031 269 KVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 319 (977)
Q Consensus 269 ~l~~~l~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~ 319 (977)
.+...+.++. +..+|..|++|+|+||.||+++.+ +.++|+|||++....
T Consensus 140 ~~~~i~~~i~~~l~~lH~~~ivH~dlkp~Nil~~~~--~~~kl~Dfg~~~~~~ 190 (321)
T 2qkw_B 140 QRLEICIGAARGLHYLHTRAIIHRDVKSINILLDEN--FVPKITDFGISKKGT 190 (321)
T ss_dssp HHHHHHHHHHHHHHHHHHTTEECSCCCSTTEEECTT--CCEEECCCTTCEECS
T ss_pred HHHHHHHHHHHHHHHhcCCCeecCCCCHHHEEECCC--CCEEEeecccccccc
Confidence 5555555544 888999999999999999999855 899999999987643
|
| >3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.45 E-value=1.2e-13 Score=154.16 Aligned_cols=141 Identities=18% Similarity=0.164 Sum_probs=98.7
Q ss_pred ccccccccccEEEEEEec----CCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCc
Q 002031 123 ETPLATASIAQVHRATLV----DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDF 198 (977)
Q Consensus 123 ~~piasaSigqV~~A~l~----~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~ 198 (977)
.+.||+|++|.||+|+++ .+..||||+.+.+...... -+|
T Consensus 54 ~~~lG~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~~~~~------------------------------------~~~ 97 (325)
T 3kul_A 54 EKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQR------------------------------------RDF 97 (325)
T ss_dssp EEEEEETTTEEEEEEEECCTTSCCEEEEEEEECTTCCHHHH------------------------------------HHH
T ss_pred eeEEEeCCCcEEEEEEEecCCCCCceEEEEecCCCCCHHHH------------------------------------HHH
Confidence 368999999999999984 3456999998764322111 023
Q ss_pred HHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeee----cCCceEEeeccCCCCCCChHHHHhcCCCHHHHHHHH
Q 002031 199 NSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ----SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEI 274 (977)
Q Consensus 199 ~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~----~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l 274 (977)
.+|+..+.++.+ -.|++++. ....+|||||++|.+|.++.......++...+...+
T Consensus 98 ~~E~~~l~~l~h--------------------~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~ 157 (325)
T 3kul_A 98 LSEASIMGQFDH--------------------PNIIRLEGVVTRGRLAMIVTEYMENGSLDTFLRTHDGQFTIMQLVGML 157 (325)
T ss_dssp HHHHHHHTTCCC--------------------TTBCCEEEEECGGGCCEEEEECCTTCBHHHHHHTTTTCSCHHHHHHHH
T ss_pred HHHHHHHHhCCC--------------------CCCCcEEEEEEeCCccEEEeeCCCCCcHHHHHHhcccCCCHHHHHHHH
Confidence 445554443321 12333332 456789999999999988753333356666666666
Q ss_pred HHHH--HHHHHhcCccccCCCCCCeEEccCCCCceEEEecccccccCHH
Q 002031 275 TRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSSS 321 (977)
Q Consensus 275 ~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~~ 321 (977)
.+++ +..+|..|++|+|+||+|||++.+ +.++|+|||++..+...
T Consensus 158 ~qi~~~L~~LH~~~ivH~Dlkp~NIll~~~--~~~kl~Dfg~a~~~~~~ 204 (325)
T 3kul_A 158 RGVGAGMRYLSDLGYVHRDLAARNVLVDSN--LVCKVSDFGLSRVLEDD 204 (325)
T ss_dssp HHHHHHHHHHHHTTEECSCCSGGGEEECTT--CCEEECCCSSCEECC--
T ss_pred HHHHHHHHHHHHCCeeCCCCCcceEEECCC--CCEEECCCCcccccccC
Confidence 6654 889999999999999999999855 89999999999887653
|
| >3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.44 E-value=1.4e-13 Score=155.44 Aligned_cols=140 Identities=17% Similarity=0.175 Sum_probs=95.3
Q ss_pred cccccccccEEEEEEec-CCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCcHHHH
Q 002031 124 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (977)
Q Consensus 124 ~piasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea 202 (977)
+.||.|++|.||+|+.+ +|+.||||+.+......- .+. -.+.+|.
T Consensus 29 ~~lG~G~fg~V~~~~~~~~~~~~AvK~~~~~~~~~~-~~~---------------------------------~~~~~E~ 74 (353)
T 3txo_A 29 RVLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQD-DDV---------------------------------ECTMTEK 74 (353)
T ss_dssp EEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHH-TTH---------------------------------HHHHHHH
T ss_pred EEEeeCCCEEEEEEEEcCCCCEEEEEEEEHHHhcch-hHH---------------------------------HHHHHHH
Confidence 67999999999999975 799999999864311000 000 0122344
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceee---e-cCCceEEeeccCCCCCCChHHHHhcCCCHHHHHHHHHHHH
Q 002031 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVI---Q-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY 278 (977)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~---~-~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~ 278 (977)
+.+..+.. ++ .|++++ . ....+|||||++|.+|.+... ....++...+...+.+++
T Consensus 75 ~il~~~~~-----------------hp--~Iv~l~~~~~~~~~~~lv~E~~~gg~L~~~l~-~~~~~~~~~~~~~~~qi~ 134 (353)
T 3txo_A 75 RILSLARN-----------------HP--FLTQLFCCFQTPDRLFFVMEFVNGGDLMFHIQ-KSRRFDEARARFYAAEII 134 (353)
T ss_dssp HHHHHTTT-----------------CT--TBCCEEEEEECSSEEEEEEECCCSCBHHHHHH-HHSSCCHHHHHHHHHHHH
T ss_pred HHHHhccC-----------------CC--ceeeEEEEEEeCCEEEEEEeCCCCCcHHHHHH-HcCCCCHHHHHHHHHHHH
Confidence 44333211 11 223333 2 455689999999999877643 234466666555555544
Q ss_pred --HHHHHhcCccccCCCCCCeEEccCCCCceEEEecccccccC
Q 002031 279 --AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 319 (977)
Q Consensus 279 --l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~ 319 (977)
+..+|..|++|||+||.|||++.+ |.++|+|||+++...
T Consensus 135 ~aL~~LH~~givHrDlkp~NILl~~~--g~ikL~DFG~a~~~~ 175 (353)
T 3txo_A 135 SALMFLHDKGIIYRDLKLDNVLLDHE--GHCKLADFGMCKEGI 175 (353)
T ss_dssp HHHHHHHHTTCBCCCCCGGGEEECTT--SCEEECCCTTCBCSC
T ss_pred HHHHHHHHCCCcccCCCHHHEEECCC--CCEEEccccceeecc
Confidence 888999999999999999999865 899999999998643
|
| >3op5_A Serine/threonine-protein kinase VRK1; adenosine triphosphate, amino acid sequence, binding sites, domain, models, molecular; HET: REB; 2.40A {Homo sapiens} PDB: 2lav_A 2kty_A 2kul_A | Back alignment and structure |
|---|
Probab=99.44 E-value=7.7e-14 Score=158.12 Aligned_cols=151 Identities=19% Similarity=0.244 Sum_probs=100.0
Q ss_pred ccccccccccEEEEEEecC------CCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhccccc
Q 002031 123 ETPLATASIAQVHRATLVD------GRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKEL 196 (977)
Q Consensus 123 ~~piasaSigqV~~A~l~~------G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~El 196 (977)
.+.||+|++|.||+|++++ ++.||||+.+.... ....++++++.+.. .
T Consensus 40 ~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~-~~~~e~~~~~~~~~-------------------------~ 93 (364)
T 3op5_A 40 GLPIGQGGFGCIYLADMNSSESVGSDAPCVVKVEPSDNG-PLFTELKFYQRAAK-------------------------P 93 (364)
T ss_dssp EEECCCC-CCEEEEEEECCSSCCCTTCSEEEEEEETTCH-HHHHHHHHHHHHCC-------------------------H
T ss_pred EEEEecCCCeEEEEeeecCccccccccceEEEEeeccch-hHHHHHHHHHhhhh-------------------------h
Confidence 3689999999999999854 58899999876532 23333333332210 0
Q ss_pred CcHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeee----c----CCceEEeeccCCCCCCChHHHHhcCCCHH
Q 002031 197 DFNSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ----S----SETVLILEFMDGIRLNDCESLEAFGVNKQ 268 (977)
Q Consensus 197 d~~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~----~----~~~vLVmE~i~G~~L~~~~~~~~~~~~~~ 268 (977)
.+..|...+..+ ....|++++. . ...+|||||+ |.+|.++.......++..
T Consensus 94 ~~~~e~~~~~~l--------------------~h~~iv~~~~~~~~~~~~~~~~~lv~e~~-g~~L~~~~~~~~~~l~~~ 152 (364)
T 3op5_A 94 EQIQKWIRTRKL--------------------KYLGVPKYWGSGLHDKNGKSYRFMIMDRF-GSDLQKIYEANAKRFSRK 152 (364)
T ss_dssp HHHHHHHHHTTC--------------------SCCCSCCEEEEEEEEETTEEEEEEEEECE-EEEHHHHHHHTTSCCCHH
T ss_pred HHHHHHHHHhhc--------------------cCCCCCeEEeeeeeccCCcceEEEEEeCC-CCCHHHHHHhccCCCCHH
Confidence 111222222111 1233444443 1 2258999999 999988754333456777
Q ss_pred HHHHHHHHHH--HHHHHhcCccccCCCCCCeEEccCCCCceEEEecccccccCH
Q 002031 269 KVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 320 (977)
Q Consensus 269 ~l~~~l~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 320 (977)
.+...+.+++ +..+|..|++|||+||.|||++.+.++.++|+|||+++.+..
T Consensus 153 ~~~~i~~qi~~~l~~lH~~~iiHrDlkp~Nill~~~~~~~~kl~DFG~a~~~~~ 206 (364)
T 3op5_A 153 TVLQLSLRILDILEYIHEHEYVHGDIKASNLLLNYKNPDQVYLVDYGLAYRYCP 206 (364)
T ss_dssp HHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEEESSCTTCEEECCCTTCEESSG
T ss_pred HHHHHHHHHHHHHHHHHHCCeEEecCCHHHEEEecCCCCeEEEEECCcceeccc
Confidence 7777666655 889999999999999999999843458999999999977654
|
| >3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3twj_A* 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A* | Back alignment and structure |
|---|
Probab=99.44 E-value=1.7e-13 Score=157.91 Aligned_cols=139 Identities=17% Similarity=0.202 Sum_probs=97.5
Q ss_pred cccccccccEEEEEEec-CCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCcHHHH
Q 002031 124 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (977)
Q Consensus 124 ~piasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea 202 (977)
+.||.|++|.||+|+.+ +|+.||||+.+..... . -...-.+.+|.
T Consensus 75 ~~LG~G~fG~V~~~~~~~~~~~~AiK~~~k~~~~----------------~------------------~~~~~~~~~E~ 120 (410)
T 3v8s_A 75 KVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMI----------------K------------------RSDSAFFWEER 120 (410)
T ss_dssp EEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHH----------------H------------------TCCCSTHHHHH
T ss_pred EEEEcCCCEEEEEEEECCCCcEEEEEEEehhhhh----------------h------------------hHHHHHHHHHH
Confidence 68999999999999985 6899999987531100 0 00112345565
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceee---e-cCCceEEeeccCCCCCCChHHHHhcCCCHHHHHHHHHHHH
Q 002031 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVI---Q-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY 278 (977)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~---~-~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~ 278 (977)
..+..+.+ + .|.+++ . ....+|||||++|++|.++. ....++...+...+.+++
T Consensus 121 ~il~~l~h------------------p--~Iv~l~~~~~~~~~~~lV~E~~~gg~L~~~l--~~~~~~e~~~~~~~~qi~ 178 (410)
T 3v8s_A 121 DIMAFANS------------------P--WVVQLFYAFQDDRYLYMVMEYMPGGDLVNLM--SNYDVPEKWARFYTAEVV 178 (410)
T ss_dssp HHHHHCCC------------------T--TBCCEEEEEECSSEEEEEECCCTTEEHHHHH--HHCCCCHHHHHHHHHHHH
T ss_pred HHHHhCCC------------------C--CCCeEEEEEEECCEEEEEEeCCCCCcHHHHH--HcCCCCHHHHHHHHHHHH
Confidence 55544321 1 122333 2 34568999999999998763 445566655555555544
Q ss_pred --HHHHHhcCccccCCCCCCeEEccCCCCceEEEecccccccCH
Q 002031 279 --AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 320 (977)
Q Consensus 279 --l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 320 (977)
+..+|..|++|||+||+|||++.+ |.++|+|||++..+..
T Consensus 179 ~aL~~LH~~givHrDLKp~NILl~~~--g~ikL~DFG~a~~~~~ 220 (410)
T 3v8s_A 179 LALDAIHSMGFIHRDVKPDNMLLDKS--GHLKLADFGTCMKMNK 220 (410)
T ss_dssp HHHHHHHHTTEECCCCSGGGEEECTT--SCEEECCCTTCEECCT
T ss_pred HHHHHHHHCCeEeccCCHHHeeECCC--CCEEEeccceeEeecc
Confidence 889999999999999999999865 8999999999987654
|
| >2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.44 E-value=1.4e-13 Score=151.19 Aligned_cols=165 Identities=13% Similarity=0.099 Sum_probs=96.8
Q ss_pred ccccccccccEEEEEEe-cCCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCcHHH
Q 002031 123 ETPLATASIAQVHRATL-VDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSE 201 (977)
Q Consensus 123 ~~piasaSigqV~~A~l-~~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~E 201 (977)
.+.||+|++|+||+|+. .+|+.||||+.++.....- ...-+.... .............-...-.+.+|
T Consensus 18 ~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~---~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~E 86 (298)
T 2zv2_A 18 KDEIGKGSYGVVKLAYNENDNTYYAMKVLSKKKLIRQ---AGFPRRPPP--------RGTRPAPGGCIQPRGPIEQVYQE 86 (298)
T ss_dssp EEEEEC--CCEEEEEEETTTTEEEEEEEEECC------------------------------------------CHHHHH
T ss_pred EeEEeecCCEEEEEEEECCCCcEEEEEEeehhhhhhh---ccccccccc--------ccccccccccccccchHHHHHHH
Confidence 36899999999999997 4789999999875432110 000000000 00000000000000011235667
Q ss_pred HHHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeee---cCCceEEeeccCCCCCCChHHHHhcCCCHHHHHHHHHHHH
Q 002031 202 AENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ---SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY 278 (977)
Q Consensus 202 a~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~---~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~ 278 (977)
++.+.++.+ ..-+.+-.++. ....++||||++|.+|.++.. ...++...+...+.+++
T Consensus 87 ~~~l~~l~h-----------------~~iv~~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~--~~~~~~~~~~~~~~qi~ 147 (298)
T 2zv2_A 87 IAILKKLDH-----------------PNVVKLVEVLDDPNEDHLYMVFELVNQGPVMEVPT--LKPLSEDQARFYFQDLI 147 (298)
T ss_dssp HHHHHTCCC-----------------TTBCCEEEEEECSSSSEEEEEEECCTTCBSCCSSC--SSCCCHHHHHHHHHHHH
T ss_pred HHHHHhCCC-----------------CCCCeEEEEEEcCCCCEEEEEEecCCCCcHHHHhh--cCCCCHHHHHHHHHHHH
Confidence 766655422 11122223332 234589999999999988632 33456666555555544
Q ss_pred --HHHHHhcCccccCCCCCCeEEccCCCCceEEEecccccccC
Q 002031 279 --AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 319 (977)
Q Consensus 279 --l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~ 319 (977)
+..+|..|++|+|+||+|||++.+ ++++|+|||++..+.
T Consensus 148 ~~l~~lH~~~ivH~Dlkp~Nil~~~~--~~~kl~Dfg~~~~~~ 188 (298)
T 2zv2_A 148 KGIEYLHYQKIIHRDIKPSNLLVGED--GHIKIADFGVSNEFK 188 (298)
T ss_dssp HHHHHHHHTTEECCCCCGGGEEECTT--SCEEECCCTTCEECS
T ss_pred HHHHHHHHCCeeccCCCHHHEEECCC--CCEEEecCCCccccc
Confidence 888999999999999999999865 899999999998764
|
| >3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A* | Back alignment and structure |
|---|
Probab=99.44 E-value=2.3e-13 Score=152.00 Aligned_cols=143 Identities=17% Similarity=0.141 Sum_probs=91.7
Q ss_pred cccccccccEEEEEEe----cCCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCcH
Q 002031 124 TPLATASIAQVHRATL----VDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFN 199 (977)
Q Consensus 124 ~piasaSigqV~~A~l----~~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~ 199 (977)
+.||+|++|.||+|+. .+|+.||||+.+......-. .....+.
T Consensus 23 ~~lG~G~~g~V~~~~~~~~~~~~~~~aiK~~~~~~~~~~~---------------------------------~~~~~~~ 69 (327)
T 3a62_A 23 RVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNA---------------------------------KDTAHTK 69 (327)
T ss_dssp EEEEEETTEEEEEEEECSSTTTTCEEEEEEECCC----------------------------------------------
T ss_pred EEEEeCCCEEEEEEEEeccCCCCcEEEEEEEEHHHhhhhh---------------------------------hHHHHHH
Confidence 6799999999999997 47999999998754211000 0011234
Q ss_pred HHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeee-cCCceEEeeccCCCCCCChHHHHhcCCCHHHHHHHHHHHH
Q 002031 200 SEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY 278 (977)
Q Consensus 200 ~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~ 278 (977)
+|...+..+.+ ..-+.+-.++. ....+|||||++|.+|.+.... ...+....+...+.+++
T Consensus 70 ~E~~~l~~l~h-----------------p~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~-~~~~~~~~~~~~~~qi~ 131 (327)
T 3a62_A 70 AERNILEEVKH-----------------PFIVDLIYAFQTGGKLYLILEYLSGGELFMQLER-EGIFMEDTACFYLAEIS 131 (327)
T ss_dssp -HHHHHHHCCC-----------------TTBCCEEEEEECSSCEEEEEECCTTEEHHHHHHH-HSSCCHHHHHHHHHHHH
T ss_pred HHHHHHHhCCC-----------------CCccceeEEEEcCCEEEEEEeCCCCCcHHHHHHh-CCCCCHHHHHHHHHHHH
Confidence 45555554422 00111112222 4567899999999998776432 23455555555555544
Q ss_pred --HHHHHhcCccccCCCCCCeEEccCCCCceEEEecccccccC
Q 002031 279 --AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 319 (977)
Q Consensus 279 --l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~ 319 (977)
+..+|..|++|||+||.|||++.+ +.++|+|||++....
T Consensus 132 ~al~~lH~~~ivH~Dlkp~Nill~~~--~~~kl~Dfg~~~~~~ 172 (327)
T 3a62_A 132 MALGHLHQKGIIYRDLKPENIMLNHQ--GHVKLTDFGLCKESI 172 (327)
T ss_dssp HHHHHHHHTTCCCCCCCTTTEEECTT--SCEEECCCSCC----
T ss_pred HHHHHHHhCCEEcccCCHHHeEECCC--CcEEEEeCCcccccc
Confidence 888999999999999999999865 899999999987543
|
| >4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp} | Back alignment and structure |
|---|
Probab=99.44 E-value=1.8e-13 Score=150.36 Aligned_cols=152 Identities=17% Similarity=0.228 Sum_probs=101.3
Q ss_pred CCChhhcccccCccccccccccEEEEEEec-CCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHh
Q 002031 111 GESMGGMFMDFVETPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWC 189 (977)
Q Consensus 111 g~~~~~~f~~~d~~piasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~ 189 (977)
|.-+.+-|.-. +.||.|++|.||+|+.. +|+.||||+.+......- .. .+
T Consensus 6 g~~~~~~y~i~--~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~----~~--------------------~~--- 56 (294)
T 4eqm_A 6 GKIINERYKIV--DKLGGGGMSTVYLAEDTILNIKVAIKAIFIPPREKE----ET--------------------LK--- 56 (294)
T ss_dssp SSCEETTEEEE--EEEEEETTEEEEEEEETTTCSEEEEEEEECCSSCCH----HH--------------------HH---
T ss_pred hhHhhccEEEE--EEEccCCCEEEEEEEECCCCCeEEEEEeccCccccH----HH--------------------HH---
Confidence 34444444433 57999999999999974 799999998754221100 00 00
Q ss_pred hhcccccCcHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeee----cCCceEEeeccCCCCCCChHHHHhcCC
Q 002031 190 KEAPKELDFNSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ----SSETVLILEFMDGIRLNDCESLEAFGV 265 (977)
Q Consensus 190 ~~l~~Eld~~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~----~~~~vLVmE~i~G~~L~~~~~~~~~~~ 265 (977)
.+.+|+..+.++.+ ..|++++. ....++||||++|.+|.++... ...+
T Consensus 57 -------~~~~e~~~l~~l~h--------------------p~iv~~~~~~~~~~~~~lv~e~~~g~~L~~~l~~-~~~~ 108 (294)
T 4eqm_A 57 -------RFEREVHNSSQLSH--------------------QNIVSMIDVDEEDDCYYLVMEYIEGPTLSEYIES-HGPL 108 (294)
T ss_dssp -------HHHHHHHHHTTCCB--------------------TTBCCEEEEEECSSEEEEEEECCCSCBHHHHHHH-HCSC
T ss_pred -------HHHHHHHHHhcCCC--------------------CCCceEEEeeeeCCeEEEEEeCCCCCCHHHHHHh-cCCC
Confidence 13345544443321 12333332 3456899999999999887532 2346
Q ss_pred CHHHHHHHHHHHH--HHHHHhcCccccCCCCCCeEEccCCCCceEEEecccccccCHH
Q 002031 266 NKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSSS 321 (977)
Q Consensus 266 ~~~~l~~~l~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~~ 321 (977)
+...+...+.+++ +..+|..|++|+|+||+||+++.+ ++++|+|||++..+...
T Consensus 109 ~~~~~~~~~~qi~~~l~~lH~~~i~H~Dlkp~Nil~~~~--~~~kl~Dfg~~~~~~~~ 164 (294)
T 4eqm_A 109 SVDTAINFTNQILDGIKHAHDMRIVHRDIKPQNILIDSN--KTLKIFDFGIAKALSET 164 (294)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTT--SCEEECCCSSSTTC---
T ss_pred CHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCC--CCEEEEeCCCccccccc
Confidence 6666666555554 889999999999999999999865 89999999999877543
|
| >4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A* | Back alignment and structure |
|---|
Probab=99.43 E-value=1.2e-13 Score=160.44 Aligned_cols=144 Identities=14% Similarity=0.102 Sum_probs=97.4
Q ss_pred cccccccccEEEEEEec-CCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCcHHHH
Q 002031 124 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (977)
Q Consensus 124 ~piasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea 202 (977)
+.||.|++|.||+|+.+ +|+.||||+.+..... . -...-.+++|.
T Consensus 80 ~~LG~G~fG~V~~~~~~~~~~~vAvK~~~~~~~~----------------~------------------~~~~~~~~~E~ 125 (437)
T 4aw2_A 80 KVIGRGAFGEVAVVKLKNADKVFAMKILNKWEML----------------K------------------RAETACFREER 125 (437)
T ss_dssp EEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHH----------------H------------------TTTTCCHHHHH
T ss_pred EEEEeCCCEEEEEEEEcCCCcEEEEEEEEHHHhh----------------h------------------HHHHHHHHHHH
Confidence 68999999999999986 6889999987531100 0 00112355566
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeee-cCCceEEeeccCCCCCCChHHHHhcCCCHHHHHHHHHHHH--H
Q 002031 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--A 279 (977)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~--l 279 (977)
..+..+.+ ..-+.+-..+. ....+|||||++|++|.++.......++...+...+.+++ +
T Consensus 126 ~il~~~~h-----------------p~Iv~l~~~~~~~~~~~lV~Ey~~gg~L~~~l~~~~~~l~e~~~~~~~~qi~~aL 188 (437)
T 4aw2_A 126 DVLVNGDS-----------------KWITTLHYAFQDDNNLYLVMDYYVGGDLLTLLSKFEDRLPEEMARFYLAEMVIAI 188 (437)
T ss_dssp HHHHHSCT-----------------TTBCCEEEEEECSSEEEEEECCCTTCBHHHHHHTTTTCCCHHHHHHHHHHHHHHH
T ss_pred HHHHhCCC-----------------CCEEEEEEEEeeCCEEEEEEecCCCCcHHHHHHHccCCCCHHHHHHHHHHHHHHH
Confidence 55544321 00111112222 4556899999999999877432223456655555555544 8
Q ss_pred HHHHhcCccccCCCCCCeEEccCCCCceEEEecccccccCH
Q 002031 280 HQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 320 (977)
Q Consensus 280 ~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 320 (977)
..+|..|++|||+||+|||++.+ +.++|+|||++..+..
T Consensus 189 ~~LH~~giiHrDLKp~NILl~~~--g~vkL~DFGla~~~~~ 227 (437)
T 4aw2_A 189 DSVHQLHYVHRDIKPDNILMDMN--GHIRLADFGSCLKLME 227 (437)
T ss_dssp HHHHHTTEECCCCSGGGEEECTT--SCEEECCCTTCEECCT
T ss_pred HHHHhCCeEecccCHHHeeEcCC--CCEEEcchhhhhhccc
Confidence 88999999999999999999865 8999999999976643
|
| >1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=99.43 E-value=2e-13 Score=152.18 Aligned_cols=142 Identities=17% Similarity=0.244 Sum_probs=98.7
Q ss_pred cccccccccEEEEEEec-CCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCcHHHH
Q 002031 124 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (977)
Q Consensus 124 ~piasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea 202 (977)
+.||.|++|.||+|+.+ +|+.||+|+.+...... ..+.+|+
T Consensus 11 ~~lG~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~--------------------------------------~~~~~E~ 52 (321)
T 1tki_A 11 EDLGRGEFGIVHRCVETSSKKTYMAKFVKVKGTDQ--------------------------------------VLVKKEI 52 (321)
T ss_dssp EEEEECSSEEEEEEEETTTTEEEEEEEECCCTHHH--------------------------------------HHHHHHH
T ss_pred eEEecCCCeEEEEEEECCCCcEEEEEEEecCcccH--------------------------------------HHHHHHH
Confidence 67999999999999975 78999999876432110 0133455
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeee-cCCceEEeeccCCCCCCChHHHHhcCCCHHHHHHHHHHHH--H
Q 002031 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--A 279 (977)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~--l 279 (977)
..+..+.+ ..-+.+-.++. ....+|||||++|.+|.+........++...+...+.+++ +
T Consensus 53 ~~l~~l~h-----------------pnIv~~~~~~~~~~~~~lv~e~~~g~~L~~~l~~~~~~~~~~~~~~i~~qi~~al 115 (321)
T 1tki_A 53 SILNIARH-----------------RNILHLHESFESMEELVMIFEFISGLDIFERINTSAFELNEREIVSYVHQVCEAL 115 (321)
T ss_dssp HHHHHSCC-----------------TTBCCEEEEEEETTEEEEEECCCCCCBHHHHHTSSSCCCCHHHHHHHHHHHHHHH
T ss_pred HHHHhCCC-----------------CCCCeEeEEEecCCEEEEEEEeCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHH
Confidence 55544321 11122222332 4567899999999988766432222466666666665555 8
Q ss_pred HHHHhcCccccCCCCCCeEEccCCCCceEEEecccccccCH
Q 002031 280 HQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 320 (977)
Q Consensus 280 ~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 320 (977)
..+|..|++|+|+||.|||++.+.++.++|+|||++..+..
T Consensus 116 ~~lH~~givH~Dlkp~NIl~~~~~~~~~kl~Dfg~a~~~~~ 156 (321)
T 1tki_A 116 QFLHSHNIGHFDIRPENIIYQTRRSSTIKIIEFGQARQLKP 156 (321)
T ss_dssp HHHHHTTEECCCCCGGGEEESSSSCCCEEECCCTTCEECCT
T ss_pred HHHHHCCCCcCCCCHHHEEEccCCCCCEEEEECCCCeECCC
Confidence 88999999999999999999864358999999999987643
|
| >3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A | Back alignment and structure |
|---|
Probab=99.43 E-value=2.8e-13 Score=151.20 Aligned_cols=143 Identities=15% Similarity=0.243 Sum_probs=96.4
Q ss_pred CccccccccccEEEEEEec-CCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCcHH
Q 002031 122 VETPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNS 200 (977)
Q Consensus 122 d~~piasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~ 200 (977)
..+.||.|++|.||+|+.+ +|+.||||+........+ .+
T Consensus 15 ~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~----------------------------------------~~ 54 (325)
T 3kn6_A 15 KDKPLGEGSFSICRKCVHKKSNQAFAVKIISKRMEANT----------------------------------------QK 54 (325)
T ss_dssp TSCCSEEETTEEEEEEEETTTCCEEEEEEEEGGGHHHH----------------------------------------HH
T ss_pred CCCccccCCCeEEEEEEECCCCCEEEEEEEChhhhhhH----------------------------------------HH
Confidence 3578999999999999985 799999999865332221 23
Q ss_pred HHHHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeee-cCCceEEeeccCCCCCCChHHHHhcCCCHHHHHHHHHHHH-
Q 002031 201 EAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY- 278 (977)
Q Consensus 201 Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~- 278 (977)
|...+.++.. ...-+.+-.++. ....+|||||++|.+|.+... ....++...+...+.+++
T Consensus 55 e~~~l~~l~~----------------h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~-~~~~~~~~~~~~i~~qi~~ 117 (325)
T 3kn6_A 55 EITALKLCEG----------------HPNIVKLHEVFHDQLHTFLVMELLNGGELFERIK-KKKHFSETEASYIMRKLVS 117 (325)
T ss_dssp HHHHHHHTTT----------------CTTBCCEEEEEECSSEEEEEECCCCSCBHHHHHH-HCSCCCHHHHHHHHHHHHH
T ss_pred HHHHHHHhcC----------------CCCeeEEEEEEEcCCEEEEEEEccCCCcHHHHHH-hcCCCCHHHHHHHHHHHHH
Confidence 3333333321 001122222232 455689999999999887643 223466666666555554
Q ss_pred -HHHHHhcCccccCCCCCCeEEccCC-CCceEEEecccccccCHH
Q 002031 279 -AHQIYVDGFFNGDPHPGNFLVSKDP-PHRPILLDFGLTKKLSSS 321 (977)
Q Consensus 279 -l~~i~~~G~~H~D~hPgNIlv~~~~-~g~i~LiDFG~~~~l~~~ 321 (977)
+..+|..|++|+|+||+|||++.++ ...++|+|||++......
T Consensus 118 ~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~~~~ 162 (325)
T 3kn6_A 118 AVSHMHDVGVVHRDLKPENLLFTDENDNLEIKIIDFGFARLKPPD 162 (325)
T ss_dssp HHHHHHHTTEECCCCCGGGEEEEC----CEEEECCCTTCEECCC-
T ss_pred HHHHHHHCCCeecCCCHHHEEEecCCCcccEEEeccccceecCCC
Confidence 8889999999999999999998541 137999999999876543
|
| >1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B | Back alignment and structure |
|---|
Probab=99.43 E-value=2e-13 Score=159.59 Aligned_cols=141 Identities=21% Similarity=0.231 Sum_probs=100.9
Q ss_pred cccccccccEEEEEEecCCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCcHHHHH
Q 002031 124 TPLATASIAQVHRATLVDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEAE 203 (977)
Q Consensus 124 ~piasaSigqV~~A~l~~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea~ 203 (977)
+.||+|++|.||+|+.++++.||||+.+++... . -+|.+|++
T Consensus 194 ~~lG~G~fg~V~~~~~~~~~~vavK~~~~~~~~-----~---------------------------------~~~~~E~~ 235 (454)
T 1qcf_A 194 KKLGAGQFGEVWMATYNKHTKVAVKTMKPGSMS-----V---------------------------------EAFLAEAN 235 (454)
T ss_dssp EEEECCSSEEEEEEEETTTEEEEEEEECTTSBC-----H---------------------------------HHHHHHHH
T ss_pred EEcccCCceEEEEEEECCccEEEEEEecCCCcc-----H---------------------------------HHHHHHHH
Confidence 689999999999999988999999998764311 0 02445665
Q ss_pred HHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeeecCCceEEeeccCCCCCCChHHHH-hcCCCHHHHHHHHHHHH--HH
Q 002031 204 NTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQSSETVLILEFMDGIRLNDCESLE-AFGVNKQKVVEEITRAY--AH 280 (977)
Q Consensus 204 n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~~~~~vLVmE~i~G~~L~~~~~~~-~~~~~~~~l~~~l~~~~--l~ 280 (977)
.+.++.+ ..-+.+-.++.....+|||||++|.+|.++.... ....+...+...+.++. +.
T Consensus 236 ~l~~l~h-----------------~~iv~l~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~ 298 (454)
T 1qcf_A 236 VMKTLQH-----------------DKLVKLHAVVTKEPIYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMA 298 (454)
T ss_dssp HHTTCCC-----------------TTBCCEEEEECSSSCEEEECCCTTCBHHHHHHSHHHHTCCHHHHHHHHHHHHHHHH
T ss_pred HHhhCCC-----------------CCEeeEEEEEeCCccEEEEeecCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHH
Confidence 5544422 1112222222345678999999999998875422 22455556555555544 88
Q ss_pred HHHhcCccccCCCCCCeEEccCCCCceEEEecccccccCHH
Q 002031 281 QIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSSS 321 (977)
Q Consensus 281 ~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~~ 321 (977)
.+|..|++|||+||.|||++.+ +.++|+|||+++.+...
T Consensus 299 ~LH~~~ivHrDlkp~Nill~~~--~~~kl~DFG~a~~~~~~ 337 (454)
T 1qcf_A 299 FIEQRNYIHRDLRAANILVSAS--LVCKIADFGLARVIEDN 337 (454)
T ss_dssp HHHHTTCCCSSCSGGGEEECTT--CCEEECSTTGGGGBCCH
T ss_pred HHHhCCccCCCCCHHHEEECCC--CcEEEeeCCCceEcCCC
Confidence 8999999999999999999865 89999999999887643
|
| >3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} SCOP: d.144.1.7 PDB: 2qkr_A* | Back alignment and structure |
|---|
Probab=99.42 E-value=1.8e-13 Score=151.61 Aligned_cols=141 Identities=19% Similarity=0.212 Sum_probs=92.8
Q ss_pred cccccccccEEEEEEecCCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCcHHHHH
Q 002031 124 TPLATASIAQVHRATLVDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEAE 203 (977)
Q Consensus 124 ~piasaSigqV~~A~l~~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea~ 203 (977)
+.||.|++|.||+|+.++|+.||||+.+......- .. -.+.+|++
T Consensus 27 ~~lG~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~-------------------------~~----------~~~~~E~~ 71 (311)
T 3niz_A 27 EKVGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEG-------------------------IP----------STAIREIS 71 (311)
T ss_dssp EEEEECSSCEEEEEEETTSCEEEEEEEC------C-------------------------HH----------HHHHHHHH
T ss_pred hhccCCCCeEEEEEEECCCCEEEEEEEecccccch-------------------------hh----------HHHHHHHH
Confidence 67999999999999998899999998764321100 00 02334555
Q ss_pred HHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeee-cCCceEEeeccCCCCCCChHHHHhcCCCHHHHHHHHHHHH--HH
Q 002031 204 NTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--AH 280 (977)
Q Consensus 204 n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~--l~ 280 (977)
.+.++.+ ..-+.+-.++. ....+|||||++| ++.+.......+++...+...+.+++ +.
T Consensus 72 ~l~~l~h-----------------p~iv~~~~~~~~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~ 133 (311)
T 3niz_A 72 LLKELHH-----------------PNIVSLIDVIHSERCLTLVFEFMEK-DLKKVLDENKTGLQDSQIKIYLYQLLRGVA 133 (311)
T ss_dssp HHHHCCC-----------------TTBCCEEEEECCSSCEEEEEECCSE-EHHHHHHTCTTCCCHHHHHHHHHHHHHHHH
T ss_pred HHHHcCC-----------------CCEeeeeeEEccCCEEEEEEcCCCC-CHHHHHHhccCCCCHHHHHHHHHHHHHHHH
Confidence 5554421 01122222222 3456899999997 44443222223356666555555544 88
Q ss_pred HHHhcCccccCCCCCCeEEccCCCCceEEEecccccccC
Q 002031 281 QIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 319 (977)
Q Consensus 281 ~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~ 319 (977)
.+|..|++|+|+||+|||++.+ +.++|+|||++..+.
T Consensus 134 ~LH~~~ivH~Dikp~NIl~~~~--~~~kl~Dfg~a~~~~ 170 (311)
T 3niz_A 134 HCHQHRILHRDLKPQNLLINSD--GALKLADFGLARAFG 170 (311)
T ss_dssp HHHHTTEECCCCCGGGEEECTT--CCEEECCCTTCEETT
T ss_pred HHHHCCcccCCCchHhEEECCC--CCEEEccCcCceecC
Confidence 8999999999999999999865 899999999998764
|
| >1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=99.42 E-value=1.5e-13 Score=157.31 Aligned_cols=143 Identities=22% Similarity=0.302 Sum_probs=98.5
Q ss_pred cccccccccEEEEEEec-CCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCcHHHH
Q 002031 124 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (977)
Q Consensus 124 ~piasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea 202 (977)
+.||+|++|.||+|+.+ +|+.||+|+........ . ..+.+|+
T Consensus 57 ~~LG~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~----~---------------------------------~~~~~E~ 99 (387)
T 1kob_A 57 EELGSGAFGVVHRCVEKATGRVFVAKFINTPYPLD----K---------------------------------YTVKNEI 99 (387)
T ss_dssp EEEEEETTEEEEEEEETTTCCEEEEEEEECCSHHH----H---------------------------------HHHHHHH
T ss_pred EEEecCCCEEEEEEEECCCCCEEEEEEecccchhh----H---------------------------------HHHHHHH
Confidence 67999999999999985 79999999976532210 0 0123454
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeee-cCCceEEeeccCCCCCCChHHHHhcCCCHHHHHHHHHHHH--H
Q 002031 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--A 279 (977)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~--l 279 (977)
+.+..+.+ ..-+.+-.++. ....+|||||++|.+|.+........++...+...+.+++ +
T Consensus 100 ~il~~l~h-----------------pnIv~~~~~~~~~~~~~lv~E~~~gg~L~~~l~~~~~~l~~~~~~~i~~qi~~aL 162 (387)
T 1kob_A 100 SIMNQLHH-----------------PKLINLHDAFEDKYEMVLILEFLSGGELFDRIAAEDYKMSEAEVINYMRQACEGL 162 (387)
T ss_dssp HHHTTCCS-----------------TTBCCEEEEEECSSEEEEEEECCCCCBHHHHTTCTTCCBCHHHHHHHHHHHHHHH
T ss_pred HHHHhCCC-----------------cCCCeEEEEEEeCCEEEEEEEcCCCCcHHHHHHhhcCCCCHHHHHHHHHHHHHHH
Confidence 44433311 11122222232 4556899999999998765432223456666666655554 8
Q ss_pred HHHHhcCccccCCCCCCeEEccCCCCceEEEecccccccCH
Q 002031 280 HQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 320 (977)
Q Consensus 280 ~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 320 (977)
..+|..|++|+|+||.|||++.+..+.++|+|||++..+..
T Consensus 163 ~~LH~~givHrDlkp~NIll~~~~~~~vkL~DFG~a~~~~~ 203 (387)
T 1kob_A 163 KHMHEHSIVHLDIKPENIMCETKKASSVKIIDFGLATKLNP 203 (387)
T ss_dssp HHHHHTTEECCCCCGGGEEESSTTCCCEEECCCTTCEECCT
T ss_pred HHHHhCCeeecccchHHeEEecCCCCceEEEecccceecCC
Confidence 88999999999999999999865457899999999987754
|
| >2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A* | Back alignment and structure |
|---|
Probab=99.42 E-value=4.5e-13 Score=147.58 Aligned_cols=169 Identities=12% Similarity=0.114 Sum_probs=108.9
Q ss_pred HHhCCCCCCHHHHHHHHHHHhCCChhhcccccCccccccccccEEEEEEecCCCEEEEEEecCChhhhhHhhHHHHHHHH
Q 002031 90 LQDSLPPRPVQEVSQTIEREFGESMGGMFMDFVETPLATASIAQVHRATLVDGRQVVVKVQHQGIKTIILEDLKNAKSIV 169 (977)
Q Consensus 90 Lqd~~p~~~~~~v~~~l~~elg~~~~~~f~~~d~~piasaSigqV~~A~l~~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~ 169 (977)
-+...+.+++.++.++.. ...+....+..+.||+|++|.||+|+. +|+.||||+........-.
T Consensus 8 ~~~~~~~~~~~~l~~~~~-----~f~~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~~~~~~~---------- 71 (307)
T 2nru_A 8 SDTRFHSFSFYELKNVTN-----NFDERPISVGGNKMGEGGFGVVYKGYV-NNTTVAVKKLAAMVDITTE---------- 71 (307)
T ss_dssp ---CCEECCHHHHHHHTT-----TTCCSBTTTTCCEEEECSSEEEEEEES-SSCEEEEEEECCCTTSCTT----------
T ss_pred CCCCCCcccHHHHHHHHc-----ccccccccccCCccccCCCeEEEEEEE-CCceEEEEEEecccCcchH----------
Confidence 344566777777765432 222222233457899999999999986 7899999988654321000
Q ss_pred HHHHhhCCCCCCchhHHHHhhhcccccCcHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeee----cCCceEE
Q 002031 170 DWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ----SSETVLI 245 (977)
Q Consensus 170 ~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~----~~~~vLV 245 (977)
...+ .+.+|++.+.++.+ ..|++++. ....++|
T Consensus 72 -------------~~~~----------~~~~E~~~l~~l~h--------------------~~i~~~~~~~~~~~~~~lv 108 (307)
T 2nru_A 72 -------------ELKQ----------QFDQEIKVMAKCQH--------------------ENLVELLGFSSDGDDLCLV 108 (307)
T ss_dssp -------------THHH----------HHHHHHHHHHHCCC--------------------TTBCCEEEEECSSSSCEEE
T ss_pred -------------HHHH----------HHHHHHHHHHhcCC--------------------CCeEEEEEEEecCCceEEE
Confidence 0000 23445555554421 12333332 4567999
Q ss_pred eeccCCCCCCChHHHHh--cCCCHHHHHHHHHHHH--HHHHHhcCccccCCCCCCeEEccCCCCceEEEecccccccC
Q 002031 246 LEFMDGIRLNDCESLEA--FGVNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 319 (977)
Q Consensus 246 mE~i~G~~L~~~~~~~~--~~~~~~~l~~~l~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~ 319 (977)
|||++|.+|.++..... ..++...+...+.+++ +..+|..|++|+|+||.||+++.+ +.++|+|||++....
T Consensus 109 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~H~dlkp~Nili~~~--~~~kl~Dfg~~~~~~ 184 (307)
T 2nru_A 109 YVYMPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGINFLHENHHIHRDIKSANILLDEA--FTAKISDFGLARASE 184 (307)
T ss_dssp EECCTTCBHHHHHHTGGGCCCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEECTT--CCEEECCCTTCEECC
T ss_pred EEecCCCcHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHhcCCeecCCCCHHHEEEcCC--CcEEEeecccccccc
Confidence 99999999987643211 2355555555555444 788999999999999999999855 899999999987654
|
| >3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A | Back alignment and structure |
|---|
Probab=99.42 E-value=4.6e-13 Score=146.67 Aligned_cols=150 Identities=13% Similarity=0.061 Sum_probs=100.6
Q ss_pred cccccccccEEEEEEec-CCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCcHHHH
Q 002031 124 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (977)
Q Consensus 124 ~piasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea 202 (977)
+.||+|++|+||+|+.. +|+.||||+.++.....- .. . -.|.+|+
T Consensus 37 ~~lg~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~----~~--------------------~----------~~~~~e~ 82 (286)
T 3uqc_A 37 IFHGGVPPLQFWQALDTALDRQVALTFVDPQGVLPD----DV--------------------L----------QETLSRT 82 (286)
T ss_dssp EEEEBSTTCEEEEEEETTTTEEEEEEESCTTCCSCH----HH--------------------H----------HHHHHHH
T ss_pred EEEcccCCeEEEEEEecCCCceEEEEEECcccccCH----HH--------------------H----------HHHHHHH
Confidence 68999999999999985 699999999876532110 00 0 0233455
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeee----cCCceEEeeccCCCCCCChHHHHhcCCCHHHHHHHHHHHH
Q 002031 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ----SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY 278 (977)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~----~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~ 278 (977)
..+.++. ++ .|++++. ....+|||||++|.+|.++. + .+.....+...+.+++
T Consensus 83 ~~l~~l~------------------hp--~iv~~~~~~~~~~~~~lv~e~~~g~~L~~~l--~-~~~~~~~~~~i~~ql~ 139 (286)
T 3uqc_A 83 LRLSRID------------------KP--GVARVLDVVHTRAGGLVVAEWIRGGSLQEVA--D-TSPSPVGAIRAMQSLA 139 (286)
T ss_dssp HHHHTCC------------------CT--TBCCEEEEEEETTEEEEEEECCCEEEHHHHH--T-TCCCHHHHHHHHHHHH
T ss_pred HHHhcCC------------------CC--CcceeeEEEEECCcEEEEEEecCCCCHHHHH--h-cCCChHHHHHHHHHHH
Confidence 4443331 11 2333332 45678999999999988774 2 3445555555555544
Q ss_pred --HHHHHhcCccccCCCCCCeEEccCCCCceEEEecccccccCHH-HHHHHHHHHHH
Q 002031 279 --AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSSS-MKQALAKMFFA 332 (977)
Q Consensus 279 --l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~~-~r~~~~~l~~a 332 (977)
+..+|..|++|+|+||+|||++.+ |.++|.++|.+...+.. +...+.-+++.
T Consensus 140 ~aL~~lH~~givH~Dikp~NIll~~~--g~~kl~~~~~~~~~~~~~Di~slG~il~e 194 (286)
T 3uqc_A 140 AAADAAHRAGVALSIDHPSRVRVSID--GDVVLAYPATMPDANPQDDIRGIGASLYA 194 (286)
T ss_dssp HHHHHHHHTTCCCCCCSGGGEEEETT--SCEEECSCCCCTTCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHCCCccCCCCcccEEEcCC--CCEEEEeccccCCCCchhHHHHHHHHHHH
Confidence 888999999999999999999965 88999988887665543 33334333333
|
| >2jii_A Serine/threonine-protein kinase VRK3 molecule: VA related kinase 3; transferase, pseudo kinase domain, vaccinia related kinase, ATP-binding; 2.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.42 E-value=2.7e-13 Score=152.82 Aligned_cols=147 Identities=11% Similarity=0.145 Sum_probs=101.9
Q ss_pred cccccccccEEEEEEec---------CCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhccc
Q 002031 124 TPLATASIAQVHRATLV---------DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPK 194 (977)
Q Consensus 124 ~piasaSigqV~~A~l~---------~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ 194 (977)
+.||+|++|.||+|+.+ +|+.||||+.+.. +.+..++++++.+.+
T Consensus 48 ~~lg~G~~g~Vy~~~~~~t~~~~~~~~~~~vavK~~~~~--~~~~~E~~~l~~l~h------------------------ 101 (352)
T 2jii_A 48 SFQTRDNQGILYEAAPTSTLTCDSGPQKQKFSLKLDAKD--GRLFNEQNFFQRAAK------------------------ 101 (352)
T ss_dssp EEEEEETTEEEEEEEECC-----------CEEEEEEETT--STHHHHHHHHHHHCC------------------------
T ss_pred EEecCCCCeEEEEEeecCCccccccccCceEEEEEeccc--chHHHHHHHHHHhcc------------------------
Confidence 68999999999999985 3899999998754 334444444443311
Q ss_pred ccCcHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeee-----cCCceEEeeccCCCCCCChHHHH-hcCCCHH
Q 002031 195 ELDFNSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-----SSETVLILEFMDGIRLNDCESLE-AFGVNKQ 268 (977)
Q Consensus 195 Eld~~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-----~~~~vLVmE~i~G~~L~~~~~~~-~~~~~~~ 268 (977)
.|+.++...+. ......+|.++. ....+|||||+ |.+|.++.... ...++..
T Consensus 102 --------~niv~~~~~~~-------------~~~~~~i~~~~~~~~~~~~~~~lv~e~~-~~~L~~~l~~~~~~~l~~~ 159 (352)
T 2jii_A 102 --------PLQVNKWKKLY-------------STPLLAIPTCMGFGVHQDKYRFLVLPSL-GRSLQSALDVSPKHVLSER 159 (352)
T ss_dssp --------HHHHHHHHHHT-------------TCTTCSCCCCCEEEEETTTEEEEEEECC-CEEHHHHHHHSGGGCCCHH
T ss_pred --------cchhhhhhhhc-------------cCCccCccchhhccccCCcEEEEEecCC-CcCHHHHHHhCCcCCCCHH
Confidence 23333333332 122344555543 34458999999 99998875432 2456777
Q ss_pred HHHHHHHHHH--HHHHHhcCccccCCCCCCeEEccCCCC--ceEEEecccccccCH
Q 002031 269 KVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPH--RPILLDFGLTKKLSS 320 (977)
Q Consensus 269 ~l~~~l~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g--~i~LiDFG~~~~l~~ 320 (977)
.+...+.+++ +..+|..|++|+|+||.||+++.+ + +++|+|||++..+..
T Consensus 160 ~~~~i~~qi~~~L~~LH~~~ivH~Dikp~NIl~~~~--~~~~~kl~Dfg~a~~~~~ 213 (352)
T 2jii_A 160 SVLQVACRLLDALEFLHENEYVHGNVTAENIFVDPE--DQSQVTLAGYGFAFRYCP 213 (352)
T ss_dssp HHHHHHHHHHHHHHHHHHTTCBCSCCCGGGEEEETT--EEEEEEECCGGGCBCSSG
T ss_pred HHHHHHHHHHHHHHHHHhCCccCCCCCHHHEEEcCC--CCceEEEecCcceeeccC
Confidence 7766666655 888999999999999999999965 5 899999999987754
|
| >2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A | Back alignment and structure |
|---|
Probab=99.42 E-value=3.6e-13 Score=153.13 Aligned_cols=139 Identities=20% Similarity=0.256 Sum_probs=96.4
Q ss_pred cccccccccEEEEEEec--------CCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccc
Q 002031 124 TPLATASIAQVHRATLV--------DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKE 195 (977)
Q Consensus 124 ~piasaSigqV~~A~l~--------~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~E 195 (977)
+.||.|++|+||+|+.. ++..||||+.+...... +..
T Consensus 87 ~~LG~G~fg~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~~~~---~~~-------------------------------- 131 (370)
T 2psq_A 87 KPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEK---DLS-------------------------------- 131 (370)
T ss_dssp EEESCCSSSEEEEEEEETCSTTCTTCEEEEEEEECCTTCBHH---HHH--------------------------------
T ss_pred eEEeeCCCeeEEEEEEecccCcCcCcceeEEEEEecCCcCHH---HHH--------------------------------
Confidence 68999999999999862 45689999987643211 000
Q ss_pred cCcHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeee----cCCceEEeeccCCCCCCChHHHHh---------
Q 002031 196 LDFNSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ----SSETVLILEFMDGIRLNDCESLEA--------- 262 (977)
Q Consensus 196 ld~~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~----~~~~vLVmE~i~G~~L~~~~~~~~--------- 262 (977)
++.+|++.+.++.+ + -.|++++. ....+|||||++|.+|.++.....
T Consensus 132 -~~~~E~~~l~~l~~-----------------h--pnIv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~ 191 (370)
T 2psq_A 132 -DLVSEMEMMKMIGK-----------------H--KNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYD 191 (370)
T ss_dssp -HHHHHHHHHHHSCC-----------------C--TTBCCEEEEECSSSSCEEEEECCTTCBHHHHHHHTCCC-------
T ss_pred -HHHHHHHHHHHhcC-----------------C--CCEeeEEEEEccCCCEEEEEEcCCCCCHHHHHHhhCCcccccccc
Confidence 23455555554411 1 12333332 456799999999999987744221
Q ss_pred ------cCCCHHHHHHHHHHHH--HHHHHhcCccccCCCCCCeEEccCCCCceEEEecccccccC
Q 002031 263 ------FGVNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 319 (977)
Q Consensus 263 ------~~~~~~~l~~~l~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~ 319 (977)
..++...+...+.+++ +..+|..|++|||+||.|||++.+ +.++|+|||++..+.
T Consensus 192 ~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~--~~~kl~DFG~a~~~~ 254 (370)
T 2psq_A 192 INRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTEN--NVMKIADFGLARDIN 254 (370)
T ss_dssp ----CCCCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEECTT--CCEEECCCSSCEETT
T ss_pred ccccccccCCHHHHHHHHHHHHHHHHHHHhCCeeccccchhhEEECCC--CCEEEccccCCcccC
Confidence 1245555555555544 888999999999999999999865 899999999998664
|
| >1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A* | Back alignment and structure |
|---|
Probab=99.42 E-value=2.9e-13 Score=147.32 Aligned_cols=143 Identities=17% Similarity=0.180 Sum_probs=91.3
Q ss_pred ccccccccccEEEEEEec----CCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCc
Q 002031 123 ETPLATASIAQVHRATLV----DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDF 198 (977)
Q Consensus 123 ~~piasaSigqV~~A~l~----~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~ 198 (977)
.+.||.|++|.||+|+.. .+..||||+.+........ -.+
T Consensus 20 ~~~lg~G~~g~Vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~------------------------------------~~~ 63 (281)
T 1mp8_A 20 GRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVR------------------------------------EKF 63 (281)
T ss_dssp EEEEEECSSSEEEEEEECCC--CCEEEEEEECTTTTSHHHH------------------------------------HHH
T ss_pred EeEeeecCCeeEEEEEEecCCCCceEEEEEeccccCCHHHH------------------------------------HHH
Confidence 368999999999999974 2557999987643221100 023
Q ss_pred HHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeeecCCceEEeeccCCCCCCChHHHHhcCCCHHHHHHHHHHHH
Q 002031 199 NSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQSSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY 278 (977)
Q Consensus 199 ~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~ 278 (977)
.+|+..+.++.+ ..-+.+-.++.....++||||++|.+|.++.......++...+...+.+++
T Consensus 64 ~~e~~~l~~l~h-----------------~~iv~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~ 126 (281)
T 1mp8_A 64 LQEALTMRQFDH-----------------PHIVKLIGVITENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLS 126 (281)
T ss_dssp HHHHHHHHTCCC-----------------TTBCCEEEEECSSSCEEEEECCTTEEHHHHHHHTTTTSCHHHHHHHHHHHH
T ss_pred HHHHHHHHhCCC-----------------CccceEEEEEccCccEEEEecCCCCCHHHHHHhcCCCCCHHHHHHHHHHHH
Confidence 445555444321 011122222235567899999999999887543333466666666555554
Q ss_pred --HHHHHhcCccccCCCCCCeEEccCCCCceEEEecccccccCH
Q 002031 279 --AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 320 (977)
Q Consensus 279 --l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 320 (977)
+..+|..|++|+|+||+|||++.+ +.++|+|||++..+..
T Consensus 127 ~~l~~lH~~~i~H~dlkp~Nil~~~~--~~~kl~Dfg~~~~~~~ 168 (281)
T 1mp8_A 127 TALAYLESKRFVHRDIAARNVLVSSN--DCVKLGDFGLSRYMED 168 (281)
T ss_dssp HHHHHHHHTTCCCSCCSGGGEEEEET--TEEEECC---------
T ss_pred HHHHHHHhCCeecccccHHHEEECCC--CCEEECccccccccCc
Confidence 889999999999999999999966 8999999999987654
|
| >2izr_A Casein kinase I isoform gamma-3; serine/threonine-protein kinase, transferase, ATP- binding, phosphorylation, nucleotide-binding; HET: BRK; 1.3A {Homo sapiens} PDB: 2izs_A* 2izt_A* 2izu_A* 2chl_A* 2c47_A* 2cmw_A* | Back alignment and structure |
|---|
Probab=99.41 E-value=1.9e-13 Score=152.58 Aligned_cols=135 Identities=16% Similarity=0.229 Sum_probs=97.7
Q ss_pred cccccccccEEEEEEe-cCCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCcHHHH
Q 002031 124 TPLATASIAQVHRATL-VDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (977)
Q Consensus 124 ~piasaSigqV~~A~l-~~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea 202 (977)
+.||+|++|.||+|+. .+|+.||||+....-. .-.+.+|+
T Consensus 15 ~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~---------------------------------------~~~~~~E~ 55 (330)
T 2izr_A 15 KKIGCGNFGELRLGKNLYTNEYVAIKLEPMKSR---------------------------------------APQLHLEY 55 (330)
T ss_dssp EECCC-CTTSEEEEEETTTTEEEEEEEEETTCS---------------------------------------SCCHHHHH
T ss_pred EEeeccCCceEEEEEECCCCcEEEEEEeccccc---------------------------------------hHHHHHHH
Confidence 6799999999999997 5899999998653210 11355666
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceee---e-cCCceEEeeccCCCCCCChHHHHhcCCCHHHHHHHHHHHH
Q 002031 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVI---Q-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY 278 (977)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~---~-~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~ 278 (977)
+.+.++.+ + ..|+.++ . ....+|||||+ |.+|.++.......++...+...+.+++
T Consensus 56 ~~l~~l~~-----------------h--~~i~~~~~~~~~~~~~~lv~e~~-~~~L~~~~~~~~~~~~~~~~~~i~~qi~ 115 (330)
T 2izr_A 56 RFYKQLGS-----------------G--DGIPQVYYFGPCGKYNAMVLELL-GPSLEDLFDLCDRTFSLKTVLMIAIQLI 115 (330)
T ss_dssp HHHHHHCS-----------------C--TTSCCEEEEEEETTEEEEEEECC-CCBHHHHHHHTTTCCCHHHHHHHHHHHH
T ss_pred HHHHHhhC-----------------C--CCCCEEEEEEecCCccEEEEEeC-CCCHHHHHHHcCCCCCHHHHHHHHHHHH
Confidence 66666521 0 1233333 2 34568999999 8898887544344567777666666655
Q ss_pred --HHHHHhcCccccCCCCCCeEEccCCCCc-----eEEEecccccccC
Q 002031 279 --AHQIYVDGFFNGDPHPGNFLVSKDPPHR-----PILLDFGLTKKLS 319 (977)
Q Consensus 279 --l~~i~~~G~~H~D~hPgNIlv~~~~~g~-----i~LiDFG~~~~l~ 319 (977)
+..+|..|++|||+||.|||++.+ +. ++|+|||++..+.
T Consensus 116 ~~l~~LH~~~iiHrDlkp~Nill~~~--~~~~~~~~kl~DFg~a~~~~ 161 (330)
T 2izr_A 116 SRMEYVHSKNLIYRDVKPENFLIGRP--GNKTQQVIHIIDFALAKEYI 161 (330)
T ss_dssp HHHHHHHHTTEECCCCCGGGEEECCG--GGTCTTSEEECCCTTCEESB
T ss_pred HHHHHHHhCCeeccCCCHHHeeeccC--CCCCCceEEEEEcccceeee
Confidence 889999999999999999999865 54 9999999998753
|
| >1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ... | Back alignment and structure |
|---|
Probab=99.41 E-value=3.2e-13 Score=151.56 Aligned_cols=138 Identities=15% Similarity=0.139 Sum_probs=94.1
Q ss_pred cccccccccEEEEEEec-CCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCcHHHH
Q 002031 124 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (977)
Q Consensus 124 ~piasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea 202 (977)
+.||.|++|+||+|+.+ +|+.||||+.+...... .+ ..-.+.+|.
T Consensus 11 ~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~--~~--------------------------------~~~~~~~E~ 56 (337)
T 1o6l_A 11 KLLGKGTFGKVILVREKATGRYYAMKILRKEVIIA--KD--------------------------------EVAHTVTES 56 (337)
T ss_dssp EEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHH--TT--------------------------------CHHHHHHHH
T ss_pred EEEecCCCeEEEEEEECCCCCEEEEEEEeHHHhhh--hh--------------------------------HHHHHHHHH
Confidence 67999999999999985 79999999986421100 00 000123344
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceee---e-cCCceEEeeccCCCCCCChHHHHhcCCCHHHHHHHHHHHH
Q 002031 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVI---Q-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY 278 (977)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~---~-~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~ 278 (977)
+.+..+. ++ .|.+++ . ....+|||||++|.+|.+... ....++...+...+.+++
T Consensus 57 ~~l~~l~------------------hp--~iv~l~~~~~~~~~~~lv~E~~~gg~L~~~l~-~~~~~~~~~~~~~~~qi~ 115 (337)
T 1o6l_A 57 RVLQNTR------------------HP--FLTALKYAFQTHDRLCFVMEYANGGELFFHLS-RERVFTEERARFYGAEIV 115 (337)
T ss_dssp HHHHSCC------------------CT--TBCCEEEEEECSSEEEEEEECCTTCBHHHHHH-HHSCCCHHHHHHHHHHHH
T ss_pred HHHHhCC------------------CC--cCcceEEEEEeCCEEEEEEeCCCCCcHHHHHH-hcCCCCHHHHHHHHHHHH
Confidence 4433321 11 222332 2 455689999999999876643 223456655555555544
Q ss_pred --HHHHHhcCccccCCCCCCeEEccCCCCceEEEeccccccc
Q 002031 279 --AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKL 318 (977)
Q Consensus 279 --l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l 318 (977)
+..+|..|++|||+||.|||++.+ |.++|+|||+++..
T Consensus 116 ~aL~~LH~~~ivHrDlkp~NIll~~~--g~vkL~DFG~a~~~ 155 (337)
T 1o6l_A 116 SALEYLHSRDVVYRDIKLENLMLDKD--GHIKITDFGLCKEG 155 (337)
T ss_dssp HHHHHHHHTTCBCCCCCGGGEEECTT--SCEEECCCTTCBCS
T ss_pred HHHHHHHHCCeecCcCCHHHEEECCC--CCEEEeeccchhhc
Confidence 888999999999999999999865 89999999998754
|
| >1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=99.41 E-value=2.1e-13 Score=154.05 Aligned_cols=145 Identities=18% Similarity=0.186 Sum_probs=98.7
Q ss_pred cccccccccEEEEEEe----cCCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCcH
Q 002031 124 TPLATASIAQVHRATL----VDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFN 199 (977)
Q Consensus 124 ~piasaSigqV~~A~l----~~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~ 199 (977)
+.||+|++|+||+|+. .+|+.||||+.+......-. ...-.+.
T Consensus 60 ~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~---------------------------------~~~~~~~ 106 (355)
T 1vzo_A 60 KVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKA---------------------------------KTTEHTR 106 (355)
T ss_dssp EEEEETTTEEEEEEEECSSTTTTCEEEEEEESEEEEEEEE---------------------------------SSGGGCC
T ss_pred EEeccCCCEEEEEEEEcccCCCCeEEEEEEEeHHHhhhhh---------------------------------hHHHHHH
Confidence 6799999999999997 37999999997643210000 0011234
Q ss_pred HHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeee-cCCceEEeeccCCCCCCChHHHHhcCCCHHHHHHHHHHHH
Q 002031 200 SEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY 278 (977)
Q Consensus 200 ~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~ 278 (977)
+|.+.+.++++. ..-+.+-..+. ....+|||||++|.+|.++... ...++...+...+.+++
T Consensus 107 ~E~~~l~~l~~h----------------~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~-~~~~~~~~~~~~~~qi~ 169 (355)
T 1vzo_A 107 TERQVLEHIRQS----------------PFLVTLHYAFQTETKLHLILDYINGGELFTHLSQ-RERFTEHEVQIYVGEIV 169 (355)
T ss_dssp CHHHHHHHHHTC----------------TTBCCEEEEEEETTEEEEEECCCCSCBHHHHHHH-HSCCCHHHHHHHHHHHH
T ss_pred HHHHHHHHccCC----------------CceeEEEEEEeeCceEEEEeecCCCCCHHHHHHH-cCCCCHHHHHHHHHHHH
Confidence 455666655421 00111112222 4556899999999999877532 23466666655555544
Q ss_pred --HHHHHhcCccccCCCCCCeEEccCCCCceEEEecccccccCH
Q 002031 279 --AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 320 (977)
Q Consensus 279 --l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 320 (977)
+..+|..|++|+||||.|||++.+ ++++|+|||++..+..
T Consensus 170 ~aL~~LH~~~ivH~Dlkp~NIll~~~--~~~kl~DfG~a~~~~~ 211 (355)
T 1vzo_A 170 LALEHLHKLGIIYRDIKLENILLDSN--GHVVLTDFGLSKEFVA 211 (355)
T ss_dssp HHHHHHHHTTCCCCCCCGGGEEECTT--SCEEESCSSEEEECCG
T ss_pred HHHHHHHHCCcccCCCCHHHEEECCC--CcEEEeeCCCCeeccc
Confidence 888999999999999999999865 8999999999987654
|
| >1csn_A Casein kinase-1; phosphotransferase; HET: ATP; 2.00A {Schizosaccharomyces pombe} SCOP: d.144.1.7 PDB: 1eh4_A* 2csn_A* | Back alignment and structure |
|---|
Probab=99.41 E-value=2.8e-13 Score=148.35 Aligned_cols=138 Identities=19% Similarity=0.308 Sum_probs=98.0
Q ss_pred cccccccccEEEEEEe-cCCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCcHHHH
Q 002031 124 TPLATASIAQVHRATL-VDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (977)
Q Consensus 124 ~piasaSigqV~~A~l-~~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea 202 (977)
+.||+|++|.||+|+. .+|+.||||+.+.... .-.+.+|.
T Consensus 16 ~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~---------------------------------------~~~~~~e~ 56 (298)
T 1csn_A 16 RRIGEGSFGVIFEGTNLLNNQQVAIKFEPRRSD---------------------------------------APQLRDEY 56 (298)
T ss_dssp EEEEECSSCEEEEEEETTTTEEEEEEEEECCTT---------------------------------------SCCHHHHH
T ss_pred EEEeecCCEEEEEEEECCCCcEEEEEEeccCCc---------------------------------------cHHHHHHH
Confidence 6799999999999996 5899999998653211 11345566
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeee----cCCceEEeeccCCCCCCChHHHHhcCCCHHHHHHHHHHHH
Q 002031 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ----SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY 278 (977)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~----~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~ 278 (977)
+.+.++.+. ..+|.++. ....+|||||+ |.+|.++.......++...+...+.+++
T Consensus 57 ~~~~~l~~~-------------------~~i~~~~~~~~~~~~~~lv~e~~-~~~L~~~l~~~~~~~~~~~~~~i~~qi~ 116 (298)
T 1csn_A 57 RTYKLLAGC-------------------TGIPNVYYFGQEGLHNVLVIDLL-GPSLEDLLDLCGRKFSVKTVAMAAKQML 116 (298)
T ss_dssp HHHHHTTTC-------------------TTCCCEEEEEEETTEEEEEEECC-CCBHHHHHHHTTTCCCHHHHHHHHHHHH
T ss_pred HHHHHHhcC-------------------CCCCeEEeecCCCceeEEEEEec-CCCHHHHHHHhccCCCHHHHHHHHHHHH
Confidence 555554321 12333332 45568999999 8899887543333467766666666655
Q ss_pred --HHHHHhcCccccCCCCCCeEEccCC---CCceEEEecccccccCH
Q 002031 279 --AHQIYVDGFFNGDPHPGNFLVSKDP---PHRPILLDFGLTKKLSS 320 (977)
Q Consensus 279 --l~~i~~~G~~H~D~hPgNIlv~~~~---~g~i~LiDFG~~~~l~~ 320 (977)
+..+|..|++|+|+||.||+++.++ .+.++|+|||++..+..
T Consensus 117 ~~l~~lH~~~ivH~Dlkp~NIl~~~~~~~~~~~~kl~Dfg~~~~~~~ 163 (298)
T 1csn_A 117 ARVQSIHEKSLVYRDIKPDNFLIGRPNSKNANMIYVVDFGMVKFYRD 163 (298)
T ss_dssp HHHHHHHTTTEECCCCCGGGEEECCSSSTTTTCEEECCCTTCEESBC
T ss_pred HHHHHHHhCCEecCCCCHHHEEeccCCCCCCCeEEEEECcccccccc
Confidence 8889999999999999999998541 12399999999986643
|
| >1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ... | Back alignment and structure |
|---|
Probab=99.41 E-value=3.5e-13 Score=146.24 Aligned_cols=139 Identities=20% Similarity=0.223 Sum_probs=98.9
Q ss_pred cccccccccEEEEEEecCCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCcHHHHH
Q 002031 124 TPLATASIAQVHRATLVDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEAE 203 (977)
Q Consensus 124 ~piasaSigqV~~A~l~~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea~ 203 (977)
+.||+|++|.||+|+..+++.||||+.+.+.... -.+.+|++
T Consensus 19 ~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~--------------------------------------~~~~~E~~ 60 (279)
T 1qpc_A 19 ERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSP--------------------------------------DAFLAEAN 60 (279)
T ss_dssp EEEEEETTEEEEEEEETTTEEEEEEEECTTSSCH--------------------------------------HHHHHHHH
T ss_pred eeecCCCCeEEEEEEEcCCcEEEEEEecCCcccH--------------------------------------HHHHHHHH
Confidence 6899999999999999888899999876532110 02345555
Q ss_pred HHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeeecCCceEEeeccCCCCCCChHHHH-hcCCCHHHHHHHHHHHH--HH
Q 002031 204 NTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQSSETVLILEFMDGIRLNDCESLE-AFGVNKQKVVEEITRAY--AH 280 (977)
Q Consensus 204 n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~~~~~vLVmE~i~G~~L~~~~~~~-~~~~~~~~l~~~l~~~~--l~ 280 (977)
.+.++.+ ..-+.+-.++.....++||||++|.+|.++.... ...++...+...+.+++ +.
T Consensus 61 ~l~~l~h-----------------~~i~~~~~~~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~ 123 (279)
T 1qpc_A 61 LMKQLQH-----------------QRLVRLYAVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMA 123 (279)
T ss_dssp HHHHCCC-----------------TTBCCEEEEECSSSCEEEEECCTTCBHHHHTTSHHHHTCCHHHHHHHHHHHHHHHH
T ss_pred HHHhCCC-----------------cCcceEEEEEcCCCcEEEEecCCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHH
Confidence 5555422 0112222222355678999999999998764321 12466666666555554 88
Q ss_pred HHHhcCccccCCCCCCeEEccCCCCceEEEecccccccC
Q 002031 281 QIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 319 (977)
Q Consensus 281 ~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~ 319 (977)
.+|..|++|+|+||.||+++.+ +.++|+|||++..+.
T Consensus 124 ~lH~~~i~H~dikp~Nil~~~~--~~~kl~Dfg~~~~~~ 160 (279)
T 1qpc_A 124 FIEERNYIHRDLRAANILVSDT--LSCKIADFGLARLIE 160 (279)
T ss_dssp HHHHTTEECSCCSGGGEEECTT--SCEEECCCTTCEECS
T ss_pred HHHHCCeeccCCCHhhEEEcCC--CCEEECCCccccccc
Confidence 8999999999999999999855 899999999998764
|
| >3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A* | Back alignment and structure |
|---|
Probab=99.40 E-value=3e-13 Score=145.57 Aligned_cols=137 Identities=18% Similarity=0.187 Sum_probs=99.9
Q ss_pred cccccccccEEEEEEecCCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCcHHHHH
Q 002031 124 TPLATASIAQVHRATLVDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEAE 203 (977)
Q Consensus 124 ~piasaSigqV~~A~l~~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea~ 203 (977)
+.||+|++|.||+|+..+++.||||+.++..... -++.+|.+
T Consensus 14 ~~lg~G~~g~V~~~~~~~~~~vaiK~~~~~~~~~--------------------------------------~~~~~e~~ 55 (267)
T 3t9t_A 14 QEIGSGQFGLVHLGYWLNKDKVAIKTIREGAMSE--------------------------------------EDFIEEAE 55 (267)
T ss_dssp EEEEEETTEEEEEEEETTTEEEEEEEECTTTBCH--------------------------------------HHHHHHHH
T ss_pred eEecCCCceeEEEEEecCCCeEEEEEccccCCCH--------------------------------------HHHHHHHH
Confidence 6799999999999999889999999987543210 02344555
Q ss_pred HHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeee----cCCceEEeeccCCCCCCChHHHHhcCCCHHHHHHHHHHHH-
Q 002031 204 NTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ----SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY- 278 (977)
Q Consensus 204 n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~----~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~- 278 (977)
.+.++.+ ..|++++. ....++||||++|.+|.++.......++...+...+.+++
T Consensus 56 ~l~~l~h--------------------~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~i~~ 115 (267)
T 3t9t_A 56 VMMKLSH--------------------PKLVQLYGVCLEQAPICLVTEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCE 115 (267)
T ss_dssp HHHTCCC--------------------TTBCCEEEEECSSSSCEEEECCCTTCBHHHHHHHTTTCCCHHHHHHHHHHHHH
T ss_pred HHHhCCC--------------------CCEeeEEEEEccCCCeEEEEeCCCCCcHHHHHhhCcccCCHHHHHHHHHHHHH
Confidence 5444321 12233332 4567899999999999887543333466666666665554
Q ss_pred -HHHHHhcCccccCCCCCCeEEccCCCCceEEEecccccccCH
Q 002031 279 -AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 320 (977)
Q Consensus 279 -l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 320 (977)
+..+|..|++|+|+||.||+++.+ +.++|+|||++.....
T Consensus 116 ~l~~lH~~~i~H~dl~p~Nili~~~--~~~kl~dfg~~~~~~~ 156 (267)
T 3t9t_A 116 GMAYLEEACVIHRDLAARNCLVGEN--QVIKVSDFGMTRFVLD 156 (267)
T ss_dssp HHHHHHHTTCCCSSCCGGGEEECGG--GCEEECCTTGGGGBCC
T ss_pred HHHHHHhCCcccCCCchheEEECCC--CCEEEccccccccccc
Confidence 888999999999999999999865 8899999999987754
|
| >1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=99.40 E-value=2.3e-13 Score=151.50 Aligned_cols=140 Identities=21% Similarity=0.246 Sum_probs=94.5
Q ss_pred cccccccccEEEEEEec-CCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCcHHHH
Q 002031 124 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (977)
Q Consensus 124 ~piasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea 202 (977)
+.||+|++|.||+|+.+ +|+.||||+.+....... . ..-.+.+|.
T Consensus 12 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~----~------------------------------~~~~~~~E~ 57 (318)
T 1fot_A 12 RTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRL----K------------------------------QVEHTNDER 57 (318)
T ss_dssp EEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHT----T------------------------------CHHHHHHHH
T ss_pred EEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhh----h------------------------------HHHHHHHHH
Confidence 67999999999999985 799999999864321100 0 000122343
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceee---e-cCCceEEeeccCCCCCCChHHHHhcCCCHHHHHHHHHHHH
Q 002031 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVI---Q-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY 278 (977)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~---~-~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~ 278 (977)
..+..+. ++ .|.+++ . ....+|||||++|.+|.++... ...++...+...+.+++
T Consensus 58 ~~l~~l~------------------hp--~Iv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~-~~~~~~~~~~~~~~qi~ 116 (318)
T 1fot_A 58 LMLSIVT------------------HP--FIIRMWGTFQDAQQIFMIMDYIEGGELFSLLRK-SQRFPNPVAKFYAAEVC 116 (318)
T ss_dssp HHHHSCC------------------BT--TBCCEEEEEECSSEEEEEECCCCSCBHHHHHHH-TSSCCHHHHHHHHHHHH
T ss_pred HHHhhCC------------------CC--CCceEeEEEEeCCEEEEEEeCCCCCCHHHHHHH-cCCCCHHHHHHHHHHHH
Confidence 3333221 11 233333 2 4556899999999999876432 23455555554444444
Q ss_pred --HHHHHhcCccccCCCCCCeEEccCCCCceEEEecccccccCH
Q 002031 279 --AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 320 (977)
Q Consensus 279 --l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 320 (977)
+..+|..|++|||+||.|||++.+ |.++|+|||++..++.
T Consensus 117 ~aL~~LH~~~ivHrDlkp~NIll~~~--g~~kL~Dfg~a~~~~~ 158 (318)
T 1fot_A 117 LALEYLHSKDIIYRDLKPENILLDKN--GHIKITDFGFAKYVPD 158 (318)
T ss_dssp HHHHHHHTTTEECCCCCGGGEEECTT--SCEEECCCSSCEECSS
T ss_pred HHHHHHHHCCccccCCChheEEEcCC--CCEEEeecCcceecCC
Confidence 888999999999999999999865 8999999999987643
|
| >1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A* | Back alignment and structure |
|---|
Probab=99.40 E-value=4.1e-13 Score=151.19 Aligned_cols=142 Identities=15% Similarity=0.136 Sum_probs=94.4
Q ss_pred cccccccccEEEEEEec-CCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCcHHHH
Q 002031 124 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (977)
Q Consensus 124 ~piasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea 202 (977)
+.||+|++|.||+|+.+ +|+.||||+.+...... ..+. -.+..|.
T Consensus 23 ~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~-~~~~---------------------------------~~~~~E~ 68 (345)
T 1xjd_A 23 KMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLM-DDDV---------------------------------ECTMVEK 68 (345)
T ss_dssp EEEEECSSSEEEEEEETTTTEEEEEEEEEHHHHHH-TTCH---------------------------------HHHHHHH
T ss_pred EEEeeCCCeEEEEEEECCCCCEEEEEEEEhHHhhh-hhhH---------------------------------HHHHHHH
Confidence 67999999999999985 79999999986431100 0000 0122343
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeee-cCCceEEeeccCCCCCCChHHHHhcCCCHHHHHHHHHHHH--H
Q 002031 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--A 279 (977)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~--l 279 (977)
+.+..+. .+ ..-+.+-..+. ....+|||||++|++|.+.... ...++...+...+.+++ +
T Consensus 69 ~il~~~~---~h-------------p~iv~l~~~~~~~~~~~lv~E~~~gg~L~~~l~~-~~~~~~~~~~~~~~qi~~aL 131 (345)
T 1xjd_A 69 RVLSLAW---EH-------------PFLTHMFCTFQTKENLFFVMEYLNGGDLMYHIQS-CHKFDLSRATFYAAEIILGL 131 (345)
T ss_dssp HHHHHHT---TC-------------TTBCCEEEEEECSSEEEEEEECCTTCBHHHHHHH-HSSCCHHHHHHHHHHHHHHH
T ss_pred HHHHhcC---CC-------------CCCCcEEEEEEeCCEEEEEEeCCCCCcHHHHHHH-cCCCCHHHHHHHHHHHHHHH
Confidence 3333321 10 01111222222 4556899999999999876432 23466666555555544 8
Q ss_pred HHHHhcCccccCCCCCCeEEccCCCCceEEEeccccccc
Q 002031 280 HQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKL 318 (977)
Q Consensus 280 ~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l 318 (977)
..+|..|++|||+||.|||++.+ |.++|+|||+++..
T Consensus 132 ~~LH~~~ivHrDlkp~NIll~~~--g~vkL~DFG~a~~~ 168 (345)
T 1xjd_A 132 QFLHSKGIVYRDLKLDNILLDKD--GHIKIADFGMCKEN 168 (345)
T ss_dssp HHHHHTTCBCCCCCGGGEEECTT--SCEEECCCTTCBCC
T ss_pred HHHHHCCeEeCCCChhhEEECCC--CCEEEeEChhhhhc
Confidence 88999999999999999999865 89999999998764
|
| >4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 4ehz_A* 4ei4_A* 4fk6_A* 3eyg_A* 3eyh_A* | Back alignment and structure |
|---|
Probab=99.40 E-value=3.6e-13 Score=147.87 Aligned_cols=141 Identities=21% Similarity=0.228 Sum_probs=96.7
Q ss_pred cccccccccEEEEEEe-----cCCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCc
Q 002031 124 TPLATASIAQVHRATL-----VDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDF 198 (977)
Q Consensus 124 ~piasaSigqV~~A~l-----~~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~ 198 (977)
+.||+|++|.||+|+. .+|+.||||+.++....... -++
T Consensus 27 ~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~------------------------------------~~~ 70 (302)
T 4e5w_A 27 RDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHI------------------------------------ADL 70 (302)
T ss_dssp EEEEECSSEEEEEEEECTTSSSCSEEEEEEEEC-----CCH------------------------------------HHH
T ss_pred hccCCCCceEEEEEEEccccCccCeEEEEEEecccccchhH------------------------------------HHH
Confidence 6799999999999983 47899999998754221100 023
Q ss_pred HHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeee-c--CCceEEeeccCCCCCCChHHHHhcCCCHHHHHHHHH
Q 002031 199 NSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-S--SETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEIT 275 (977)
Q Consensus 199 ~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~--~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~ 275 (977)
.+|++.+.++.+ ..-+.+-.++. . ...++||||++|.+|.++.......++...+...+.
T Consensus 71 ~~E~~~l~~l~h-----------------~~i~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~ 133 (302)
T 4e5w_A 71 KKEIEILRNLYH-----------------ENIVKYKGICTEDGGNGIKLIMEFLPSGSLKEYLPKNKNKINLKQQLKYAV 133 (302)
T ss_dssp HHHHHHHHTCCC-----------------TTBCCEEEEEEC---CCEEEEEECCTTCBHHHHHHHHTTTCCHHHHHHHHH
T ss_pred HHHHHHHHhCCC-----------------CCeeeeeeEEecCCCceEEEEEEeCCCCcHHHHHHhccccCCHHHHHHHHH
Confidence 345554444321 01112222222 2 345899999999999887644444567666666666
Q ss_pred HHH--HHHHHhcCccccCCCCCCeEEccCCCCceEEEecccccccC
Q 002031 276 RAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 319 (977)
Q Consensus 276 ~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~ 319 (977)
+++ +..+|..|++|+|+||.||+++.+ ++++|+|||++..+.
T Consensus 134 ~i~~~l~~lH~~~i~H~dikp~Nil~~~~--~~~kl~Dfg~~~~~~ 177 (302)
T 4e5w_A 134 QICKGMDYLGSRQYVHRDLAARNVLVESE--HQVKIGDFGLTKAIE 177 (302)
T ss_dssp HHHHHHHHHHHTTEECSCCSGGGEEEEET--TEEEECCCTTCEECC
T ss_pred HHHHHHHHhhcCCcccCCCchheEEEcCC--CCEEECccccccccc
Confidence 655 889999999999999999999866 899999999987654
|
| >4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus} | Back alignment and structure |
|---|
Probab=99.40 E-value=5.9e-13 Score=152.65 Aligned_cols=140 Identities=16% Similarity=0.118 Sum_probs=94.8
Q ss_pred cccccccccEEEEEEec-CCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCcHHHH
Q 002031 124 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (977)
Q Consensus 124 ~piasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea 202 (977)
+.||.|++|.||+|+.+ +|+.||||+.+......- . ..-.+..|.
T Consensus 58 ~~LG~G~fG~V~~~~~~~~~~~~AvK~~~k~~~~~~-~---------------------------------~~~~~~~E~ 103 (396)
T 4dc2_A 58 RVIGRGSYAKVLLVRLKKTDRIYAMRVVKKELVNDD-E---------------------------------DIDWVQTEK 103 (396)
T ss_dssp EEEEECSSEEEEEEEETTTTEEEEEEEEEGGGTC--------------------------------------CCHHHHHH
T ss_pred EEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCH-H---------------------------------HHHHHHHHH
Confidence 68999999999999985 688999999864321100 0 000133444
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCC-CeEeceeee-cCCceEEeeccCCCCCCChHHHHhcCCCHHHHHHHHHHHH--
Q 002031 203 ENTRIVSANLGCKNKHEDSNKKPAYEV-DVLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY-- 278 (977)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~-~v~vP~v~~-~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~-- 278 (977)
..+.++.+ ++ -+.+-..+. ....+|||||++|.+|.+... ....++...+...+.+++
T Consensus 104 ~il~~~~~-----------------hp~Iv~l~~~~~~~~~~~lV~E~~~gg~L~~~l~-~~~~l~~~~~~~~~~qi~~a 165 (396)
T 4dc2_A 104 HVFEQASN-----------------HPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQ-RQRKLPEEHARFYSAEISLA 165 (396)
T ss_dssp HHHHHHTT-----------------CTTBCCEEEEEECSSEEEEEEECCTTCBHHHHHH-HHSSCCHHHHHHHHHHHHHH
T ss_pred HHHHhcCC-----------------CCCcCeeEEEEEECCEEEEEEEcCCCCcHHHHHH-HcCCCCHHHHHHHHHHHHHH
Confidence 44444321 11 111222222 455689999999999876643 234466666555555544
Q ss_pred HHHHHhcCccccCCCCCCeEEccCCCCceEEEecccccc
Q 002031 279 AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKK 317 (977)
Q Consensus 279 l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~ 317 (977)
+..+|..|++||||||.|||++.+ |.++|+|||+++.
T Consensus 166 L~~LH~~givHrDLKp~NILl~~~--g~ikL~DFGla~~ 202 (396)
T 4dc2_A 166 LNYLHERGIIYRDLKLDNVLLDSE--GHIKLTDYGMCKE 202 (396)
T ss_dssp HHHHHHTTCBCCCCCGGGEEECTT--SCEEECCCTTCBC
T ss_pred HHHHHHCCEEeccCCHHHEEECCC--CCEEEeecceeee
Confidence 889999999999999999999865 8999999999875
|
| >1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ... | Back alignment and structure |
|---|
Probab=99.40 E-value=2.9e-13 Score=158.24 Aligned_cols=140 Identities=19% Similarity=0.196 Sum_probs=99.3
Q ss_pred cccccccccEEEEEEecCCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCcHHHHH
Q 002031 124 TPLATASIAQVHRATLVDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEAE 203 (977)
Q Consensus 124 ~piasaSigqV~~A~l~~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea~ 203 (977)
+.||+|++|.||+|+.+++..||||+.+++.... -+|.+|++
T Consensus 190 ~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~~~--------------------------------------~~~~~E~~ 231 (452)
T 1fmk_A 190 VKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSP--------------------------------------EAFLQEAQ 231 (452)
T ss_dssp EEEEECSSCEEEEEEETTTEEEEEEECCTTSSCH--------------------------------------HHHHHHHH
T ss_pred eeecCCCCeEEEEEEECCCceEEEEEeccCCCCH--------------------------------------HHHHHHHH
Confidence 6799999999999999888889999987642110 02456777
Q ss_pred HHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeeecCCceEEeeccCCCCCCChHHHH-hcCCCHHHHHHHHHHHH--HH
Q 002031 204 NTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQSSETVLILEFMDGIRLNDCESLE-AFGVNKQKVVEEITRAY--AH 280 (977)
Q Consensus 204 n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~~~~~vLVmE~i~G~~L~~~~~~~-~~~~~~~~l~~~l~~~~--l~ 280 (977)
.+.++++ ..-+.+-.++.....+|||||++|.+|.++.... ...++...+...+.++. +.
T Consensus 232 ~l~~l~h-----------------p~iv~~~~~~~~~~~~iv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~ 294 (452)
T 1fmk_A 232 VMKKLRH-----------------EKLVQLYAVVSEEPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMA 294 (452)
T ss_dssp HHHHCCC-----------------TTBCCEEEEECSSSCEEEECCCTTCBHHHHHSHHHHTTCCHHHHHHHHHHHHHHHH
T ss_pred HHHhCCC-----------------CCEeeEEEEEcCCceEEEehhhcCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHH
Confidence 6666532 0111122222245678999999999998875432 23366666666666654 88
Q ss_pred HHHhcCccccCCCCCCeEEccCCCCceEEEecccccccCH
Q 002031 281 QIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 320 (977)
Q Consensus 281 ~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 320 (977)
.+|..|++|||+||.|||++.+ +.++|+|||++..+..
T Consensus 295 ~LH~~~ivHrDlkp~Nill~~~--~~~kl~DfG~a~~~~~ 332 (452)
T 1fmk_A 295 YVERMNYVHRDLRAANILVGEN--LVCKVADFGLARLIED 332 (452)
T ss_dssp HHHHTTCCCSCCSGGGEEECGG--GCEEECCCCTTC----
T ss_pred HHHhCCeeCCCCChhhEEECCC--CCEEECCCccceecCC
Confidence 8999999999999999999865 8999999999987754
|
| >1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ... | Back alignment and structure |
|---|
Probab=99.40 E-value=2.6e-13 Score=153.12 Aligned_cols=140 Identities=14% Similarity=0.152 Sum_probs=95.7
Q ss_pred cccccccccEEEEEEec-CCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCcHHHH
Q 002031 124 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (977)
Q Consensus 124 ~piasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea 202 (977)
+.||+|++|.||+|+.+ +|+.||||+.++...... . ..-.+.+|.
T Consensus 47 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~----~------------------------------~~~~~~~E~ 92 (350)
T 1rdq_E 47 KTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKL----K------------------------------QIEHTLNEK 92 (350)
T ss_dssp EEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHT----T------------------------------CHHHHHHHH
T ss_pred EEeecCcCcEEEEEEECCCCCEEEEEEEEhHHhccH----H------------------------------HHHHHHHHH
Confidence 68999999999999985 799999999754211000 0 000123344
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceee---e-cCCceEEeeccCCCCCCChHHHHhcCCCHHHHHHHHHHHH
Q 002031 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVI---Q-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY 278 (977)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~---~-~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~ 278 (977)
+.+..+. ++ .|.+++ . ....+|||||++|.+|.+.... ...++...+...+.+++
T Consensus 93 ~~l~~l~------------------hp--~iv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~-~~~~~~~~~~~~~~qi~ 151 (350)
T 1rdq_E 93 RILQAVN------------------FP--FLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRR-IGRFSEPHARFYAAQIV 151 (350)
T ss_dssp HHHTTCC------------------CT--TBCCEEEEEECSSEEEEEEECCTTCBHHHHHHH-HCCCCHHHHHHHHHHHH
T ss_pred HHHHhCC------------------CC--CCCeEEEEEEcCCEEEEEEcCCCCCcHHHHHHH-cCCCCHHHHHHHHHHHH
Confidence 3333221 11 223333 2 4556899999999998776432 23456666555555544
Q ss_pred --HHHHHhcCccccCCCCCCeEEccCCCCceEEEecccccccCH
Q 002031 279 --AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 320 (977)
Q Consensus 279 --l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 320 (977)
+..+|..|++|||+||.|||++.+ |.++|+|||++..+..
T Consensus 152 ~aL~~LH~~~ivHrDlkp~NIll~~~--g~~kL~DFg~a~~~~~ 193 (350)
T 1rdq_E 152 LTFEYLHSLDLIYRDLKPENLLIDQQ--GYIQVTDFGFAKRVKG 193 (350)
T ss_dssp HHHHHHHHTTEECCCCSGGGEEECTT--SCEEECCCTTCEECSS
T ss_pred HHHHHHHHCCcccccCccceEEECCC--CCEEEcccccceeccC
Confidence 888999999999999999999865 8999999999987643
|
| >3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.40 E-value=7.1e-13 Score=146.75 Aligned_cols=144 Identities=18% Similarity=0.146 Sum_probs=93.1
Q ss_pred cccccccccEEEEEEec-CCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCcHHHH
Q 002031 124 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (977)
Q Consensus 124 ~piasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea 202 (977)
+.||.|++|+||+|+.+ +|+.||||+.......... +..+..|.
T Consensus 63 ~~LG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~-----------------------------------~~~~~~e~ 107 (311)
T 3p1a_A 63 SRLGHGSYGEVFKVRSKEDGRLYAVKRSMSPFRGPKD-----------------------------------RARKLAEV 107 (311)
T ss_dssp EEEEEETTEEEEEEEETTTSCEEEEEEESSSCCSHHH-----------------------------------HHHHHHHH
T ss_pred heeccCCCeEEEEEEECCCCeEEEEEEecccccChHH-----------------------------------HHHHHHHH
Confidence 57999999999999986 8999999987643321110 00111222
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeee-cCCceEEeeccCCCCCCChHHHHhcCCCHHHHHHHHHHHH--H
Q 002031 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--A 279 (977)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~--l 279 (977)
..+.++ ... ..-+.+-..+. ....+|||||+.| +|.+........++...+...+.+++ +
T Consensus 108 ~~~~~~---~~h-------------~~iv~l~~~~~~~~~~~lv~e~~~~-~L~~~~~~~~~~l~~~~~~~i~~qi~~aL 170 (311)
T 3p1a_A 108 GSHEKV---GQH-------------PCCVRLEQAWEEGGILYLQTELCGP-SLQQHCEAWGASLPEAQVWGYLRDTLLAL 170 (311)
T ss_dssp HHHHHH---CCC-------------TTBCCEEEEEEETTEEEEEEECCCC-BHHHHHHHHCSCCCHHHHHHHHHHHHHHH
T ss_pred HHHHHh---cCC-------------CcEEEEEEEEEeCCEEEEEEeccCC-CHHHHHHhcCCCCCHHHHHHHHHHHHHHH
Confidence 222222 110 11122222222 4556899999954 66555433333466666666555554 8
Q ss_pred HHHHhcCccccCCCCCCeEEccCCCCceEEEecccccccCHH
Q 002031 280 HQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSSS 321 (977)
Q Consensus 280 ~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~~ 321 (977)
..+|..|++|+|+||+|||++.+ +.++|+|||++..+...
T Consensus 171 ~~LH~~~ivH~Dikp~NIll~~~--~~~kl~DFG~a~~~~~~ 210 (311)
T 3p1a_A 171 AHLHSQGLVHLDVKPANIFLGPR--GRCKLGDFGLLVELGTA 210 (311)
T ss_dssp HHHHHTTEECCCCSGGGEEECGG--GCEEECCCTTCEECC--
T ss_pred HHHHHCCEecCCCCHHHEEECCC--CCEEEccceeeeecccC
Confidence 88999999999999999999865 89999999999887653
|
| >3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A* | Back alignment and structure |
|---|
Probab=99.40 E-value=4.7e-13 Score=148.23 Aligned_cols=139 Identities=16% Similarity=0.191 Sum_probs=92.0
Q ss_pred ccccccccccEEEEEEecCCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCcHHHH
Q 002031 123 ETPLATASIAQVHRATLVDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (977)
Q Consensus 123 ~~piasaSigqV~~A~l~~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea 202 (977)
.+.||+|++|.||+|+. +|+.||||+........- . .+ .+.+|+
T Consensus 42 ~~~lG~G~~g~V~~~~~-~~~~vavK~~~~~~~~~~--~-----------------------~~----------~~~~E~ 85 (309)
T 3p86_A 42 KEKIGAGSFGTVHRAEW-HGSDVAVKILMEQDFHAE--R-----------------------VN----------EFLREV 85 (309)
T ss_dssp EEEEEECSSEEEEEEEE-TTEEEEEEEECCCCCSHH--H-----------------------HH----------HHHHHH
T ss_pred eeEeecCCCeEEEEEEE-CCCcEEEEEecCCCCCHH--H-----------------------HH----------HHHHHH
Confidence 36899999999999987 689999999864321100 0 00 244566
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceee---e-cCCceEEeeccCCCCCCChHHHHh--cCCCHHHHHHHHHH
Q 002031 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVI---Q-SSETVLILEFMDGIRLNDCESLEA--FGVNKQKVVEEITR 276 (977)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~---~-~~~~vLVmE~i~G~~L~~~~~~~~--~~~~~~~l~~~l~~ 276 (977)
+.+.++++ ..|.+++ . ....++||||++|.+|.++..... ..++...+...+.+
T Consensus 86 ~~l~~l~h--------------------p~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~q 145 (309)
T 3p86_A 86 AIMKRLRH--------------------PNIVLFMGAVTQPPNLSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYD 145 (309)
T ss_dssp HHHHHCCC--------------------TTBCCEEEEECSTTCCEEEEECCTTCBHHHHHHSTTHHHHSCHHHHHHHHHH
T ss_pred HHHHhCCC--------------------CCEeeEEEEEEECCceEEEEecCCCCcHHHHHhhcCCCCCCCHHHHHHHHHH
Confidence 66555432 1122333 2 455689999999999987643111 11555555555555
Q ss_pred HH--HHHHHhcC--ccccCCCCCCeEEccCCCCceEEEecccccccC
Q 002031 277 AY--AHQIYVDG--FFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 319 (977)
Q Consensus 277 ~~--l~~i~~~G--~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~ 319 (977)
++ +..+|..| ++|+|+||+||+++.+ +.++|+|||++....
T Consensus 146 i~~aL~~LH~~~~~ivH~Dikp~NIll~~~--~~~kL~Dfg~a~~~~ 190 (309)
T 3p86_A 146 VAKGMNYLHNRNPPIVHRNLKSPNLLVDKK--YTVKVCDFGLSRLKA 190 (309)
T ss_dssp HHHHHHHHHTSSSCCCCTTCCGGGEEECTT--CCEEECCCC------
T ss_pred HHHHHHHHHcCCCCEECCCCChhhEEEeCC--CcEEECCCCCCcccc
Confidence 44 88899999 9999999999999865 899999999987543
|
| >3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A | Back alignment and structure |
|---|
Probab=99.40 E-value=4.9e-13 Score=151.50 Aligned_cols=139 Identities=18% Similarity=0.144 Sum_probs=95.6
Q ss_pred cccccccccEEEEEEec-CCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCcHHHH
Q 002031 124 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (977)
Q Consensus 124 ~piasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea 202 (977)
+.||+|++|.||+|+.+ +|+.||||+.+.+.... -.+.+|+
T Consensus 26 ~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~--------------------------------------~~~~~E~ 67 (361)
T 3uc3_A 26 KDIGSGNFGVARLMRDKLTKELVAVKYIERGAAID--------------------------------------ENVQREI 67 (361)
T ss_dssp EEESSSTTSSEEEEEETTTCCEEEEEEEESSTTSC--------------------------------------HHHHHHH
T ss_pred EEeccCCCEEEEEEEECCCCcEEEEEEEecCcccc--------------------------------------HHHHHHH
Confidence 67999999999999985 89999999886432100 0133455
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeee-cCCceEEeeccCCCCCCChHHHHhcCCCHHHHHHHHHHHH--H
Q 002031 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--A 279 (977)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~--l 279 (977)
..+.++++ ..-+.+-.++. ....+|||||++|.+|.+... ....++...+...+.+++ +
T Consensus 68 ~~l~~l~h-----------------pniv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~-~~~~~~~~~~~~i~~ql~~~L 129 (361)
T 3uc3_A 68 INHRSLRH-----------------PNIVRFKEVILTPTHLAIIMEYASGGELYERIC-NAGRFSEDEARFFFQQLLSGV 129 (361)
T ss_dssp HHHHHCCC-----------------TTBCCEEEEEECSSEEEEEEECCCSCBHHHHHH-HHSSCCHHHHHHHHHHHHHHH
T ss_pred HHHHhCCC-----------------CCCCcEEEEEeeCCEEEEEEEeCCCCCHHHHHH-hcCCCCHHHHHHHHHHHHHHH
Confidence 55444421 11122223333 455689999999999877643 233466666666555554 8
Q ss_pred HHHHhcCccccCCCCCCeEEccCCCCceEEEeccccccc
Q 002031 280 HQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKL 318 (977)
Q Consensus 280 ~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l 318 (977)
..+|..|++|||+||.|||++.++.++++|+|||++...
T Consensus 130 ~~LH~~~ivH~Dlkp~Nill~~~~~~~~kl~Dfg~a~~~ 168 (361)
T 3uc3_A 130 SYCHSMQICHRDLKLENTLLDGSPAPRLKICDFGYSKSS 168 (361)
T ss_dssp HHHHHTTCCSCCCCGGGEEECSSSSCCEEECCCCCC---
T ss_pred HHHHHCCcccCCCCHHHEEEcCCCCceEEEeecCccccc
Confidence 889999999999999999998664456999999998743
|
| >3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A* | Back alignment and structure |
|---|
Probab=99.40 E-value=4.4e-13 Score=149.41 Aligned_cols=136 Identities=17% Similarity=0.176 Sum_probs=95.4
Q ss_pred cccccccccEEEEEEec-CCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCcHHHH
Q 002031 124 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (977)
Q Consensus 124 ~piasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea 202 (977)
+.||.|++|.||+|+.+ +|+.||||+........ .+-.+.+|+
T Consensus 13 ~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~------------------------------------~~~~~~~E~ 56 (323)
T 3tki_A 13 QTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVD------------------------------------CPENIKKEI 56 (323)
T ss_dssp EEEEEETTEEEEEEEETTTCCEEEEEEEECC-------------------------------------------CHHHHH
T ss_pred eEEecCCCEEEEEEEECCCCcEEEEEEEEcccccc------------------------------------hHHHHHHHH
Confidence 67999999999999975 89999999875432110 011344566
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceee---e-cCCceEEeeccCCCCCCChHHHHhcCCCHHHHHHHHHHHH
Q 002031 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVI---Q-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY 278 (977)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~---~-~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~ 278 (977)
..+..+.+ ..|.+++ . ....+|||||++|.+|.+.... ...++...+...+.+++
T Consensus 57 ~~l~~l~h--------------------pnIv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~-~~~~~~~~~~~i~~qi~ 115 (323)
T 3tki_A 57 CINKMLNH--------------------ENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEP-DIGMPEPDAQRFFHQLM 115 (323)
T ss_dssp HHHHHCCC--------------------TTBCCEEEEEECSSEEEEEEECCTTEEGGGGSBT-TTBCCHHHHHHHHHHHH
T ss_pred HHHHhCCC--------------------CCCCeEEEEEecCCeEEEEEEcCCCCcHHHHHhh-cCCCCHHHHHHHHHHHH
Confidence 55554421 1123333 2 4556899999999999876431 22355555555555544
Q ss_pred --HHHHHhcCccccCCCCCCeEEccCCCCceEEEeccccccc
Q 002031 279 --AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKL 318 (977)
Q Consensus 279 --l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l 318 (977)
+..+|..|++|+|+||+|||++.+ +.++|+|||++..+
T Consensus 116 ~aL~~LH~~givH~Dlkp~NIll~~~--~~~kl~Dfg~a~~~ 155 (323)
T 3tki_A 116 AGVVYLHGIGITHRDIKPENLLLDER--DNLKISDFGLATVF 155 (323)
T ss_dssp HHHHHHHHTTEECSCCSGGGEEECTT--CCEEECCCTTCEEC
T ss_pred HHHHHHHHCCccccccchHHEEEeCC--CCEEEEEeecccee
Confidence 888999999999999999999865 89999999999765
|
| >3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A* | Back alignment and structure |
|---|
Probab=99.39 E-value=4.9e-13 Score=147.94 Aligned_cols=140 Identities=23% Similarity=0.352 Sum_probs=92.7
Q ss_pred cccccccccEEEEEEe-cCCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCcHHHH
Q 002031 124 TPLATASIAQVHRATL-VDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (977)
Q Consensus 124 ~piasaSigqV~~A~l-~~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea 202 (977)
+.||.|++|+||+|+. .+|+.||||+.+......- .. .. .+.+|+
T Consensus 18 ~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~----~~--------------------~~----------~~~~E~ 63 (311)
T 3ork_A 18 EILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDP----SF--------------------YL----------RFRREA 63 (311)
T ss_dssp EEEEECSSEEEEEEEETTTTEEEEEEEECTTTTTSH----HH--------------------HH----------HHHHHH
T ss_pred EEEccCCCEEEEEEEECCCCceEEEEEeCccccCCH----HH--------------------HH----------HHHHHH
Confidence 6899999999999997 5899999999876432110 00 00 122333
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeee----cCCc----eEEeeccCCCCCCChHHHHhcCCCHHHHHHHH
Q 002031 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ----SSET----VLILEFMDGIRLNDCESLEAFGVNKQKVVEEI 274 (977)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~----~~~~----vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l 274 (977)
+.+.++. + ..|.+++. .... +|||||++|.+|.++... ...++...+...+
T Consensus 64 ~~l~~l~------------------h--p~iv~~~~~~~~~~~~~~~~~lv~e~~~g~~L~~~l~~-~~~~~~~~~~~~~ 122 (311)
T 3ork_A 64 QNAAALN------------------H--PAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHT-EGPMTPKRAIEVI 122 (311)
T ss_dssp TTCCCCC------------------C--TTBCCEEEEEEEEETTEEEEEEEEECCCEEEHHHHHHH-HCSCCHHHHHHHH
T ss_pred HHHHcCC------------------C--CCcceEEEeeeccCCCCcccEEEEecCCCCCHHHHHHh-cCCCCHHHHHHHH
Confidence 2222111 1 12333332 2222 899999999999887542 2346666666655
Q ss_pred HHHH--HHHHHhcCccccCCCCCCeEEccCCCCceEEEecccccccCH
Q 002031 275 TRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 320 (977)
Q Consensus 275 ~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 320 (977)
.+++ +..+|..|++|+|+||+||+++.+ +.++|+|||++..+..
T Consensus 123 ~qi~~~l~~lH~~~ivH~dlkp~Nil~~~~--~~~kl~Dfg~a~~~~~ 168 (311)
T 3ork_A 123 ADACQALNFSHQNGIIHRDVKPANIMISAT--NAVKVMDFGIARAIAD 168 (311)
T ss_dssp HHHHHHHHHHHHTTCCCCCCCGGGEEEETT--SCEEECCCSCC-----
T ss_pred HHHHHHHHHHHHCCCCcCCCCHHHEEEcCC--CCEEEeeccCcccccc
Confidence 5554 888999999999999999999865 8999999999987654
|
| >3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 4hvd_A* 4hvg_A* 4hvh_A* 4hvi_A* 3pjc_A* 1yvj_A* | Back alignment and structure |
|---|
Probab=99.39 E-value=4.4e-13 Score=149.32 Aligned_cols=141 Identities=18% Similarity=0.181 Sum_probs=98.8
Q ss_pred ccccccccccEEEEEEe-----cCCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccC
Q 002031 123 ETPLATASIAQVHRATL-----VDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELD 197 (977)
Q Consensus 123 ~~piasaSigqV~~A~l-----~~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld 197 (977)
.+.||.|++|.||+|+. .+|+.||||+.+..-.... -.
T Consensus 28 ~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~-------------------------------------~~ 70 (327)
T 3lxl_A 28 ISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQ-------------------------------------RD 70 (327)
T ss_dssp EEEEEEETTEEEEEEEECTTSSSCSEEEEEEEESSCCHHHH-------------------------------------HH
T ss_pred hhhccCCCCeEEEEEEeccCCCCcceEEEEEEeccCCHHHH-------------------------------------HH
Confidence 36899999999999984 4789999999865422110 01
Q ss_pred cHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeee---cCCceEEeeccCCCCCCChHHHHhcCCCHHHHHHHH
Q 002031 198 FNSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ---SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEI 274 (977)
Q Consensus 198 ~~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~---~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l 274 (977)
+.+|++.+.++.+ ..-+.+-.++. ....+|||||++|.+|.++.......++...+...+
T Consensus 71 ~~~E~~~l~~l~h-----------------~~i~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~ 133 (327)
T 3lxl_A 71 FQREIQILKALHS-----------------DFIVKYRGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRARLDASRLLLYS 133 (327)
T ss_dssp HHHHHHHHHTCCC-----------------TTBCCEEEEEECSSSCEEEEEEECCTTCBHHHHHHHHGGGCCHHHHHHHH
T ss_pred HHHHHHHHHhcCC-----------------CceeEEEEEEecCCCceEEEEEeecCCCCHHHHHHhcccCCCHHHHHHHH
Confidence 3445555444421 01111112222 233579999999999988765434456777666666
Q ss_pred HHHH--HHHHHhcCccccCCCCCCeEEccCCCCceEEEecccccccC
Q 002031 275 TRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 319 (977)
Q Consensus 275 ~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~ 319 (977)
.+++ +..+|..|++|+|+||+||+++.+ ++++|+|||++..++
T Consensus 134 ~qi~~al~~lH~~~ivH~Dikp~NIl~~~~--~~~kl~Dfg~~~~~~ 178 (327)
T 3lxl_A 134 SQICKGMEYLGSRRCVHRDLAARNILVESE--AHVKIADFGLAKLLP 178 (327)
T ss_dssp HHHHHHHHHHHHTTEECSCCSGGGEEEEET--TEEEECCGGGCEECC
T ss_pred HHHHHHHHHHHhCCccCCCCChhhEEECCC--CCEEEcccccceecc
Confidence 6655 888999999999999999999866 899999999998654
|
| >2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 | Back alignment and structure |
|---|
Probab=99.39 E-value=3.5e-13 Score=160.90 Aligned_cols=141 Identities=18% Similarity=0.190 Sum_probs=102.9
Q ss_pred cccccccccEEEEEEecCCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCcHHHHH
Q 002031 124 TPLATASIAQVHRATLVDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEAE 203 (977)
Q Consensus 124 ~piasaSigqV~~A~l~~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea~ 203 (977)
+.||+|++|.||+|++++++.||||+.+++.... -+|.+|++
T Consensus 273 ~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~~~--------------------------------------~~~~~E~~ 314 (535)
T 2h8h_A 273 VKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSP--------------------------------------EAFLQEAQ 314 (535)
T ss_dssp EEEEECSSEEEEEEEETTTEEEEEEEECTTSSCH--------------------------------------HHHHHHHH
T ss_pred eecccCCCeEEEEEEECCCceEEEEEeCCCCCCH--------------------------------------HHHHHHHH
Confidence 6799999999999999888899999987643110 02456776
Q ss_pred HHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeeecCCceEEeeccCCCCCCChHHHH-hcCCCHHHHHHHHHHHH--HH
Q 002031 204 NTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQSSETVLILEFMDGIRLNDCESLE-AFGVNKQKVVEEITRAY--AH 280 (977)
Q Consensus 204 n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~~~~~vLVmE~i~G~~L~~~~~~~-~~~~~~~~l~~~l~~~~--l~ 280 (977)
.+.++++. ..+.+-.++.....+|||||++|.+|.++.... ...++...+...+.+++ +.
T Consensus 315 ~l~~l~hp-----------------niv~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~ 377 (535)
T 2h8h_A 315 VMKKLRHE-----------------KLVQLYAVVSEEPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMA 377 (535)
T ss_dssp HHHHCCCT-----------------TBCCEEEEECSSSCEEEECCCTTEEHHHHHSHHHHTTCCHHHHHHHHHHHHHHHH
T ss_pred HHHhCCCC-----------------CEeeEEEEEeeccceEeeehhcCCcHHHHHhhcCCCCCCHHHHHHHHHHHHHHHH
Confidence 66665320 112222222245678999999999998875432 23366666666666655 88
Q ss_pred HHHhcCccccCCCCCCeEEccCCCCceEEEecccccccCHH
Q 002031 281 QIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSSS 321 (977)
Q Consensus 281 ~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~~ 321 (977)
.+|..|++||||||.||||+.+ +.++|+|||+++.+...
T Consensus 378 ~LH~~~ivHrDlkp~NIll~~~--~~~kl~DFG~a~~~~~~ 416 (535)
T 2h8h_A 378 YVERMNYVHRDLRAANILVGEN--LVCKVADFGLARLIEDN 416 (535)
T ss_dssp HHHHTTCCCSCCSGGGEEECGG--GCEEECCTTSTTTCCCH
T ss_pred HHHhCCeeCCCCCHhhEEEcCC--CcEEEcccccceecCCC
Confidence 8999999999999999999865 89999999999887643
|
| >2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.39 E-value=4.3e-13 Score=149.39 Aligned_cols=140 Identities=21% Similarity=0.257 Sum_probs=97.3
Q ss_pred cccccccccEEEEEEe-----cCCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCc
Q 002031 124 TPLATASIAQVHRATL-----VDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDF 198 (977)
Q Consensus 124 ~piasaSigqV~~A~l-----~~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~ 198 (977)
+.||+|++|+||+|+. .+|+.||||+.++...... + .+
T Consensus 47 ~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~---------------------------~----------~~ 89 (326)
T 2w1i_A 47 QQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHL---------------------------R----------DF 89 (326)
T ss_dssp EEEECCSSEEEEEEEECTTSSSCCEEEEEEEESSCCSHHH---------------------------H----------HH
T ss_pred eeeccCCCeEEEEEEeccccCCCceEEEEEEeccCCHHHH---------------------------H----------HH
Confidence 6799999999999984 4789999999876422110 0 23
Q ss_pred HHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeee---cCCceEEeeccCCCCCCChHHHHhcCCCHHHHHHHHH
Q 002031 199 NSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ---SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEIT 275 (977)
Q Consensus 199 ~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~---~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~ 275 (977)
.+|++.+.++.+ ..-+.+-.++. ....++||||++|.+|.++.......++...+...+.
T Consensus 90 ~~E~~~l~~l~h-----------------~~iv~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~ 152 (326)
T 2w1i_A 90 EREIEILKSLQH-----------------DNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTS 152 (326)
T ss_dssp HHHHHHHHTCCC-----------------TTBCCEEEEECC----CCEEEECCCTTCBHHHHHHHSTTSSCHHHHHHHHH
T ss_pred HHHHHHHHhCCC-----------------CCeeeEEEEEEecCCCceEEEEECCCCCCHHHHHHhcccCCCHHHHHHHHH
Confidence 445555444321 11112222222 1246899999999999887543333466666666665
Q ss_pred HHH--HHHHHhcCccccCCCCCCeEEccCCCCceEEEecccccccC
Q 002031 276 RAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 319 (977)
Q Consensus 276 ~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~ 319 (977)
+++ +..+|..|++|+|+||+||+++.+ ++++|+|||++..+.
T Consensus 153 qi~~aL~~LH~~~ivH~dikp~NIli~~~--~~~kL~Dfg~~~~~~ 196 (326)
T 2w1i_A 153 QICKGMEYLGTKRYIHRDLATRNILVENE--NRVKIGDFGLTKVLP 196 (326)
T ss_dssp HHHHHHHHHHHTTEECSCCCGGGEEEEET--TEEEECCCTTCEECC
T ss_pred HHHHHHHHHHhCCEeccCCCcceEEEcCC--CcEEEecCcchhhcc
Confidence 555 888999999999999999999966 899999999988764
|
| >3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3ulz_A* 3tl8_A* | Back alignment and structure |
|---|
Probab=99.39 E-value=2.5e-13 Score=151.01 Aligned_cols=142 Identities=18% Similarity=0.234 Sum_probs=95.2
Q ss_pred ccccccccccEEEEEEecCCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCcHHHH
Q 002031 123 ETPLATASIAQVHRATLVDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (977)
Q Consensus 123 ~~piasaSigqV~~A~l~~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea 202 (977)
.+.||+|++|.||+|+.++|+.||||+.++..... .+..+.+|+
T Consensus 35 ~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~------------------------------------~~~~~~~e~ 78 (326)
T 3uim_A 35 KNILGRGGFGKVYKGRLADGTLVAVKRLKEERTQG------------------------------------GELQFQTEV 78 (326)
T ss_dssp TTEEECCSSSEEEEECCSSSCCEEEEECCC-----------------------------------------CCCHHHHHH
T ss_pred ceeEecCCCcEEEEEEecCCCEEEEEEeccccCch------------------------------------HHHHHHHHH
Confidence 36899999999999998889999999876532110 112344555
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeee-cCCceEEeeccCCCCCCChHHHHh---cCCCHHHHHHHHHHHH
Q 002031 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLEA---FGVNKQKVVEEITRAY 278 (977)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLVmE~i~G~~L~~~~~~~~---~~~~~~~l~~~l~~~~ 278 (977)
+.+..+.+ ..-+.+-.++. ....++||||++|.+|.++..... ..++...+...+.+++
T Consensus 79 ~~l~~l~h-----------------~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~ 141 (326)
T 3uim_A 79 EMISMAVH-----------------RNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRIALGSA 141 (326)
T ss_dssp HGGGTCCC-----------------TTBCCCCEEECCSSCCEEEEECCTTCBHHHHHHCCSTTCCCCCHHHHHHHHHHHH
T ss_pred HHHHhccC-----------------CCccceEEEEecCCceEEEEEeccCCCHHHHHHhccccCCCCCHHHHHHHHHHHH
Confidence 44333211 01112222222 466789999999999887643111 1245555555554444
Q ss_pred --HHHHHhc---CccccCCCCCCeEEccCCCCceEEEecccccccC
Q 002031 279 --AHQIYVD---GFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 319 (977)
Q Consensus 279 --l~~i~~~---G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~ 319 (977)
+..+|.. |++|+|+||.|||++.+ +.++|+|||++..++
T Consensus 142 ~~l~~lH~~~~~~ivH~Dlkp~Nil~~~~--~~~kl~Dfg~~~~~~ 185 (326)
T 3uim_A 142 RGLAYLHDHCDPKIIHRDVKAANILLDEE--FEAVVGDFGLAKLMD 185 (326)
T ss_dssp HHHHHHHHSSSSCEECCCCSGGGEEECTT--CCEEECCCSSCEECC
T ss_pred HHHHHHHhCCCCCeEeCCCchhhEEECCC--CCEEeccCccccccC
Confidence 7889999 99999999999999865 899999999997654
|
| >3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A* | Back alignment and structure |
|---|
Probab=99.39 E-value=5.7e-13 Score=150.05 Aligned_cols=139 Identities=17% Similarity=0.154 Sum_probs=94.0
Q ss_pred cccccccccEEEEEEec-CCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCcHHHH
Q 002031 124 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (977)
Q Consensus 124 ~piasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea 202 (977)
+.||+|++|.||+|+.+ +|+.||||+.+...... ..+.. .+.+|.
T Consensus 15 ~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~-~~~~~---------------------------------~~~~E~ 60 (345)
T 3a8x_A 15 RVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVND-DEDID---------------------------------WVQTEK 60 (345)
T ss_dssp EEEEECSSEEEEEEEETTTTEEEEEEEEEGGGSCS-HHHHH---------------------------------HHHHHH
T ss_pred EEEEecCCeEEEEEEECCCCCEEEEEEEEhHHhcc-hHHHH---------------------------------HHHHHH
Confidence 67999999999999985 78999999986432110 00000 122333
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceee---e-cCCceEEeeccCCCCCCChHHHHhcCCCHHHHHHHHHHHH
Q 002031 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVI---Q-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY 278 (977)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~---~-~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~ 278 (977)
..+.++. . ++ .|.+++ . ....+|||||++|.+|.+... ....++...+...+.+++
T Consensus 61 ~~l~~~~---~--------------hp--~iv~l~~~~~~~~~~~lv~e~~~gg~L~~~l~-~~~~l~~~~~~~~~~qi~ 120 (345)
T 3a8x_A 61 HVFEQAS---N--------------HP--FLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQ-RQRKLPEEHARFYSAEIS 120 (345)
T ss_dssp HHHHHTT---T--------------CT--TBCCEEEEEECSSEEEEEECCCCSCBHHHHHH-HHSSCCHHHHHHHHHHHH
T ss_pred HHHHhcC---C--------------CC--ccCeEEEEEEeCCEEEEEEeCCCCCcHHHHHH-HcCCCCHHHHHHHHHHHH
Confidence 3333321 1 11 122333 2 455689999999999977643 223466655555555544
Q ss_pred --HHHHHhcCccccCCCCCCeEEccCCCCceEEEeccccccc
Q 002031 279 --AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKL 318 (977)
Q Consensus 279 --l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l 318 (977)
+..+|..|++|||+||+|||++.+ |.++|+|||+++..
T Consensus 121 ~aL~~LH~~~ivHrDlkp~NIll~~~--g~~kL~DFG~a~~~ 160 (345)
T 3a8x_A 121 LALNYLHERGIIYRDLKLDNVLLDSE--GHIKLTDYGMCKEG 160 (345)
T ss_dssp HHHHHHHHTTCBCCCCCGGGEEECTT--SCEEECCGGGCBCS
T ss_pred HHHHHHHHCCceecCCCHHHEEECCC--CCEEEEeccccccc
Confidence 888999999999999999999865 89999999998753
|
| >3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A* | Back alignment and structure |
|---|
Probab=99.39 E-value=1.2e-12 Score=142.29 Aligned_cols=143 Identities=17% Similarity=0.099 Sum_probs=99.4
Q ss_pred ccccccccccEEEEEEecC----CCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCc
Q 002031 123 ETPLATASIAQVHRATLVD----GRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDF 198 (977)
Q Consensus 123 ~~piasaSigqV~~A~l~~----G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~ 198 (977)
.+.||+|++|+||+|+..+ ++.||||+.++...... .-.+
T Consensus 17 ~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~------------------------------------~~~~ 60 (281)
T 3cc6_A 17 NRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDN------------------------------------KEKF 60 (281)
T ss_dssp EEEEEECSSSEEEEEEEECTTCCEEEEEEEECCTTSCHHH------------------------------------HHHH
T ss_pred EEEEEecCCeeEEEeEEcCCCCCcceEEEEecccccCchH------------------------------------HHHH
Confidence 3789999999999998642 34699999876422110 0024
Q ss_pred HHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeeecCCceEEeeccCCCCCCChHHHHhcCCCHHHHHHHHHHHH
Q 002031 199 NSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQSSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY 278 (977)
Q Consensus 199 ~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~ 278 (977)
.+|++.+.++.+ ..-+.+-.++.....++||||++|.+|.++.......++...+...+.+++
T Consensus 61 ~~E~~~l~~l~h-----------------~~i~~~~~~~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~ 123 (281)
T 3cc6_A 61 MSEAVIMKNLDH-----------------PHIVKLIGIIEEEPTWIIMELYPYGELGHYLERNKNSLKVLTLVLYSLQIC 123 (281)
T ss_dssp HHHHHHHHHHCC-----------------TTBCCEEEEECSSSCEEEEECCTTCBHHHHHHHHTTTCCHHHHHHHHHHHH
T ss_pred HHHHHHHHhCCC-----------------CCcceEEEEEcCCCCEEEEecCCCCCHHHHHHhccccCCHHHHHHHHHHHH
Confidence 456666666532 011222223335567899999999999887544334466666666555544
Q ss_pred --HHHHHhcCccccCCCCCCeEEccCCCCceEEEecccccccCH
Q 002031 279 --AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 320 (977)
Q Consensus 279 --l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 320 (977)
+..+|..|++|+|+||.||+++.+ +.++|+|||++..+..
T Consensus 124 ~~l~~lH~~~i~H~dlkp~Nil~~~~--~~~kl~Dfg~~~~~~~ 165 (281)
T 3cc6_A 124 KAMAYLESINCVHRDIAVRNILVASP--ECVKLGDFGLSRYIED 165 (281)
T ss_dssp HHHHHHHHTTCCCCCCSGGGEEEEET--TEEEECCCCGGGCC--
T ss_pred HHHHHHHHCCcccCCCccceEEECCC--CcEEeCccCCCccccc
Confidence 888999999999999999999966 8999999999987754
|
| >1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=99.39 E-value=5.6e-13 Score=145.51 Aligned_cols=141 Identities=21% Similarity=0.237 Sum_probs=98.5
Q ss_pred cccccccccEEEEEEec---CCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCcHH
Q 002031 124 TPLATASIAQVHRATLV---DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNS 200 (977)
Q Consensus 124 ~piasaSigqV~~A~l~---~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~ 200 (977)
+.||+|++|+||+|+.+ +++.||||+.++...... .+ .+.+
T Consensus 16 ~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~---~~---------------------------------~~~~ 59 (287)
T 1u59_A 16 IELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKAD---TE---------------------------------EMMR 59 (287)
T ss_dssp EEEECCTTEEEEEEEEC---CCEEEEEEEECSSCCHHH---HH---------------------------------HHHH
T ss_pred ccccccCceeEEEeEeccCCCcceEEEEecCCccchhH---HH---------------------------------HHHH
Confidence 48999999999999864 688999999876432110 00 2344
Q ss_pred HHHHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeeecCCceEEeeccCCCCCCChHHHHhcCCCHHHHHHHHHHHH--
Q 002031 201 EAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQSSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY-- 278 (977)
Q Consensus 201 Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~-- 278 (977)
|++.+.++.+ ..-+.+-.++.....++||||++|.+|.++.......++...+...+.+++
T Consensus 60 E~~~l~~l~h-----------------~~i~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~ 122 (287)
T 1u59_A 60 EAQIMHQLDN-----------------PYIVRLIGVCQAEALMLVMEMAGGGPLHKFLVGKREEIPVSNVAELLHQVSMG 122 (287)
T ss_dssp HHHHHHHCCC-----------------TTBCCEEEEEESSSEEEEEECCTTEEHHHHHTTCTTTSCHHHHHHHHHHHHHH
T ss_pred HHHHHHhCCC-----------------CCEeEEEEEecCCCcEEEEEeCCCCCHHHHHHhCCccCCHHHHHHHHHHHHHH
Confidence 5555554421 011122222235567899999999998876432233466666666665554
Q ss_pred HHHHHhcCccccCCCCCCeEEccCCCCceEEEecccccccC
Q 002031 279 AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 319 (977)
Q Consensus 279 l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~ 319 (977)
+..+|..|++|+|+||.||+++.+ +.++|+|||++..+.
T Consensus 123 l~~lH~~~i~H~dlkp~Nili~~~--~~~kl~Dfg~~~~~~ 161 (287)
T 1u59_A 123 MKYLEEKNFVHRDLAARNVLLVNR--HYAKISDFGLSKALG 161 (287)
T ss_dssp HHHHHHTTEECCCCSGGGEEEEET--TEEEECCCTTCEECT
T ss_pred HHHHHHCCEeeCCCchheEEEcCC--CCEEECcccceeeec
Confidence 888999999999999999999965 899999999988764
|
| >1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A | Back alignment and structure |
|---|
Probab=99.39 E-value=2e-13 Score=149.17 Aligned_cols=141 Identities=16% Similarity=0.148 Sum_probs=93.2
Q ss_pred cccccccccEEEEEEecCCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCcHHHHH
Q 002031 124 TPLATASIAQVHRATLVDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEAE 203 (977)
Q Consensus 124 ~piasaSigqV~~A~l~~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea~ 203 (977)
+.||+|++|+||+|+..+|+.||||+.+......- ..-.+.+|++
T Consensus 8 ~~lg~G~~g~V~~~~~~~~~~~aiK~~~~~~~~~~-----------------------------------~~~~~~~E~~ 52 (288)
T 1ob3_A 8 EKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEG-----------------------------------IPSTTIREIS 52 (288)
T ss_dssp EEEEEETTEEEEEEEETTSCEEEEEEECCSSGGGC-----------------------------------CCHHHHHHHH
T ss_pred hhcccCCCEEEEEEEcCCCCEEEEEEEeccccccc-----------------------------------cchhHHHHHH
Confidence 57999999999999998899999998764321100 0001233444
Q ss_pred HHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeee-cCCceEEeeccCCCCCCChHHHHhcCCCHHHHHHHHHHHH--HH
Q 002031 204 NTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--AH 280 (977)
Q Consensus 204 n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~--l~ 280 (977)
.+.++.+ ..-+.+-.++. ....++||||++| +|.+.......+++...+...+.+++ +.
T Consensus 53 ~l~~l~h-----------------~~iv~~~~~~~~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~ 114 (288)
T 1ob3_A 53 ILKELKH-----------------SNIVKLYDVIHTKKRLVLVFEHLDQ-DLKKLLDVCEGGLESVTAKSFLLQLLNGIA 114 (288)
T ss_dssp GGGGCCC-----------------TTBCCEEEEEECSSCEEEEEECCSE-EHHHHHHTSTTCCCHHHHHHHHHHHHHHHH
T ss_pred HHHhcCC-----------------CCEeeeeeEEccCCeEEEEEEecCC-CHHHHHHhcccCCCHHHHHHHHHHHHHHHH
Confidence 3333211 11112222222 4566899999997 66554332223456555555555544 88
Q ss_pred HHHhcCccccCCCCCCeEEccCCCCceEEEecccccccC
Q 002031 281 QIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 319 (977)
Q Consensus 281 ~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~ 319 (977)
.+|..|++|+|+||+||+++.+ ++++|+|||++..+.
T Consensus 115 ~lH~~~i~H~dlkp~Nil~~~~--~~~kl~Dfg~~~~~~ 151 (288)
T 1ob3_A 115 YCHDRRVLHRDLKPQNLLINRE--GELKIADFGLARAFG 151 (288)
T ss_dssp HHHHTTCCCSCCCGGGEEECTT--SCEEECCTTHHHHHC
T ss_pred HHHHCCeecCCCCHHHEEEcCC--CCEEEeECccccccC
Confidence 8999999999999999999865 899999999987654
|
| >2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A* | Back alignment and structure |
|---|
Probab=99.39 E-value=9.8e-13 Score=157.06 Aligned_cols=144 Identities=15% Similarity=0.133 Sum_probs=97.7
Q ss_pred cccccccccEEEEEEec-CCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCcHHHH
Q 002031 124 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (977)
Q Consensus 124 ~piasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea 202 (977)
+.||.|++|.||+|+.+ +|+.||||+.+...... -..+..+.+|.
T Consensus 190 ~~LG~G~fG~Vy~a~~~~tg~~vAvK~l~k~~~~~----------------------------------~~~~~~~~~E~ 235 (576)
T 2acx_A 190 RVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKK----------------------------------RKGEAMALNEK 235 (576)
T ss_dssp EEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHH----------------------------------TTCHHHHHHHH
T ss_pred EEEeeCCCEEEEEEEECCCCCEEEEEEEEhHhhhh----------------------------------hHHHHHHHHHH
Confidence 68999999999999985 79999999875321000 00111234555
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeee-cCCceEEeeccCCCCCCChHHHH-hcCCCHHHHHHHHHHHH--
Q 002031 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLE-AFGVNKQKVVEEITRAY-- 278 (977)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLVmE~i~G~~L~~~~~~~-~~~~~~~~l~~~l~~~~-- 278 (977)
+.+..+.+ ...+.+-..+. ....+|||||++|++|.+..... ..+++...+...+.+++
T Consensus 236 ~iL~~l~h-----------------p~Iv~l~~~~~~~~~l~lVmEy~~gg~L~~~l~~~~~~~l~e~~~~~i~~qIl~a 298 (576)
T 2acx_A 236 QILEKVNS-----------------RFVVSLAYAYETKDALCLVLTLMNGGDLKFHIYHMGQAGFPEARAVFYAAEICCG 298 (576)
T ss_dssp HHHHHCCC-----------------TTBCCEEEEEECSSEEEEEECCCCSCBHHHHHHSSSSCCCCHHHHHHHHHHHHHH
T ss_pred HHHHHcCC-----------------CCEeeEEEEEeeCCEEEEEEEcCCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHH
Confidence 55554422 01112222222 45568999999999997653211 12256666655555544
Q ss_pred HHHHHhcCccccCCCCCCeEEccCCCCceEEEecccccccCH
Q 002031 279 AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 320 (977)
Q Consensus 279 l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 320 (977)
+..+|..|++|||+||.|||++.+ |.++|+|||++..+..
T Consensus 299 L~yLH~~gIvHrDLKPeNILld~~--g~vKL~DFGla~~~~~ 338 (576)
T 2acx_A 299 LEDLHRERIVYRDLKPENILLDDH--GHIRISDLGLAVHVPE 338 (576)
T ss_dssp HHHHHHTTEECCCCCGGGEEECTT--SCEEECCCTTCEECCT
T ss_pred HHHHHHCCEeccCCchheEEEeCC--CCeEEEecccceeccc
Confidence 888999999999999999999865 8999999999987754
|
| >3sv0_A Casein kinase I-like; typical kinase domain fold, cytosol, transferase; 2.00A {Oryza sativa japonica group} | Back alignment and structure |
|---|
Probab=99.39 E-value=6.4e-13 Score=156.28 Aligned_cols=140 Identities=19% Similarity=0.289 Sum_probs=98.6
Q ss_pred cccccccccEEEEEEe-cCCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCcHHHH
Q 002031 124 TPLATASIAQVHRATL-VDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (977)
Q Consensus 124 ~piasaSigqV~~A~l-~~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea 202 (977)
+.||.|++|.||+|+. .+|+.||||+...... .-++.+|.
T Consensus 13 ~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~---------------------------------------~~~~~~E~ 53 (483)
T 3sv0_A 13 RKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTK---------------------------------------HPQLLYES 53 (483)
T ss_dssp CCCEECSSCEEEEEEETTTCCEEEEEEEETTCS---------------------------------------SCCHHHHH
T ss_pred EEEeeCCCEEEEEEEECCCCcEEEEEEeccccc---------------------------------------cHHHHHHH
Confidence 6799999999999997 5799999998653211 11345565
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeee--cCCceEEeeccCCCCCCChHHHHhcCCCHHHHHHHHHHHH--
Q 002031 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ--SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY-- 278 (977)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~--~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~-- 278 (977)
+.+..+.+. ..+..-..+. ....+|||||+ |.+|.++.......++...+...+.+++
T Consensus 54 ~il~~L~~~-----------------~~i~~i~~~~~~~~~~~lvme~~-g~sL~~ll~~~~~~l~~~~~~~i~~qi~~a 115 (483)
T 3sv0_A 54 KIYRILQGG-----------------TGIPNVRWFGVEGDYNVLVMDLL-GPSLEDLFNFCSRKLSLKTVLMLADQMINR 115 (483)
T ss_dssp HHHHHTTTS-----------------TTCCCEEEEEEETTEEEEEEECC-CCBHHHHHHHTTTCCCHHHHHHHHHHHHHH
T ss_pred HHHHHhcCC-----------------CCCCeEEEEEeeCCEEEEEEECC-CCCHHHHHHhhcCCCCHHHHHHHHHHHHHH
Confidence 555554321 1111112222 45568999999 8888887543345577777777666665
Q ss_pred HHHHHhcCccccCCCCCCeEEcc-CCCCceEEEecccccccCH
Q 002031 279 AHQIYVDGFFNGDPHPGNFLVSK-DPPHRPILLDFGLTKKLSS 320 (977)
Q Consensus 279 l~~i~~~G~~H~D~hPgNIlv~~-~~~g~i~LiDFG~~~~l~~ 320 (977)
+..+|..||+||||||.||||+. +.++.++|+|||++..+..
T Consensus 116 L~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~ 158 (483)
T 3sv0_A 116 VEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKKYRD 158 (483)
T ss_dssp HHHHHHTTEECCCCCGGGEEECCGGGTTCEEECCCTTCEECBC
T ss_pred HHHHHHCCEeecccCcceEEEecCCCCCeEEEEeCCcceeccC
Confidence 88999999999999999999941 1238899999999987643
|
| >1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=99.38 E-value=6e-13 Score=151.14 Aligned_cols=140 Identities=21% Similarity=0.318 Sum_probs=89.5
Q ss_pred cccccccccEEEEEEe-cCCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCcHHHH
Q 002031 124 TPLATASIAQVHRATL-VDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (977)
Q Consensus 124 ~piasaSigqV~~A~l-~~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea 202 (977)
++||+|++|+||+|+. .+|+.||||+......... ... .+.+|+
T Consensus 31 ~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~-----------------------------~~~------~~~~E~ 75 (367)
T 1cm8_A 31 QPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSEL-----------------------------FAK------RAYREL 75 (367)
T ss_dssp EEC------CEEEEEETTTCCEEEEEECSSTTSSHH-----------------------------HHH------HHHHHH
T ss_pred EEeeecCCeEEEEEEECCCCCEEEEEEeCccccCHH-----------------------------HHH------HHHHHH
Confidence 6899999999999997 4799999998754321110 000 123455
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeeec-------CCceEEeeccCCCCCCChHHHHhcCCCHHHHHHHHH
Q 002031 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQS-------SETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEIT 275 (977)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~~-------~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~ 275 (977)
+.+..+++ ..-+.+-.++.. +..+|||||+ |.+|.++. ....++...+...+.
T Consensus 76 ~~l~~l~h-----------------pnIv~l~~~~~~~~~~~~~~~~~lv~e~~-~~~L~~~~--~~~~l~~~~~~~~~~ 135 (367)
T 1cm8_A 76 RLLKHMRH-----------------ENVIGLLDVFTPDETLDDFTDFYLVMPFM-GTDLGKLM--KHEKLGEDRIQFLVY 135 (367)
T ss_dssp HHHHHCCB-----------------TTBCCCSEEECSCSSTTTCCCCEEEEECC-SEEHHHHH--HHCCCCHHHHHHHHH
T ss_pred HHHHhCCC-----------------cCCCCceeeEecCCccccCceEEEEEecC-CCCHHHHH--hcCCCCHHHHHHHHH
Confidence 55544432 011222233321 3348999999 77777663 334566666655555
Q ss_pred HHH--HHHHHhcCccccCCCCCCeEEccCCCCceEEEecccccccCH
Q 002031 276 RAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 320 (977)
Q Consensus 276 ~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 320 (977)
+++ +..+|..|++|||+||+|||++.+ +.++|+|||+++..+.
T Consensus 136 qi~~~L~~LH~~~ivH~Dlkp~NIll~~~--~~~kl~Dfg~a~~~~~ 180 (367)
T 1cm8_A 136 QMLKGLRYIHAAGIIHRDLKPGNLAVNED--CELKILDFGLARQADS 180 (367)
T ss_dssp HHHHHHHHHHHTTEECCCCCGGGEEECTT--CCEEECCCTTCEECCS
T ss_pred HHHHHHHHHHHCCccccCcCHHHEEEcCC--CCEEEEeeeccccccc
Confidence 554 888999999999999999999865 8999999999987643
|
| >3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} SCOP: d.144.1.7 PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A | Back alignment and structure |
|---|
Probab=99.38 E-value=4.3e-13 Score=146.83 Aligned_cols=141 Identities=14% Similarity=0.110 Sum_probs=92.7
Q ss_pred cccccccccEEEEEEec-CCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCcHHHH
Q 002031 124 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (977)
Q Consensus 124 ~piasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea 202 (977)
+.||+|++|.||+|+.+ +|+.||||+.+......-. .. .+.+|+
T Consensus 8 ~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~-------------------------~~----------~~~~E~ 52 (292)
T 3o0g_A 8 EKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGV-------------------------PS----------SALREI 52 (292)
T ss_dssp EEEEECSSSEEEEEEETTTCCEEEEEEEESSCSSTTH-------------------------HH----------HHHHHH
T ss_pred eEecCCCCeEEEEEEECCCCceEEEEeeeccCCcCCc-------------------------ch----------HHHHHH
Confidence 57999999999999985 7999999998643221100 00 123344
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeee-cCCceEEeeccCCCCCCChHHHHhcCCCHHHHHHHHHHHH--H
Q 002031 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--A 279 (977)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~--l 279 (977)
+.+.++++ ..-+.+-.++. ....+|||||++|..+..+ ......++...+...+.+++ +
T Consensus 53 ~~l~~l~h-----------------~~iv~~~~~~~~~~~~~lv~e~~~~~l~~~~-~~~~~~l~~~~~~~~~~ql~~~l 114 (292)
T 3o0g_A 53 CLLKELKH-----------------KNIVRLHDVLHSDKKLTLVFEFCDQDLKKYF-DSCNGDLDPEIVKSFLFQLLKGL 114 (292)
T ss_dssp HHHTTCCC-----------------TTBCCEEEEEEETTEEEEEEECCSEEHHHHH-HHTTTCCCHHHHHHHHHHHHHHH
T ss_pred HHHhcCCC-----------------CCEeeEEeEEEeCCEEEEEEecCCCCHHHHH-HhCCCCCCHHHHHHHHHHHHHHH
Confidence 44333321 11122222332 4556899999997433322 22223456666555555544 8
Q ss_pred HHHHhcCccccCCCCCCeEEccCCCCceEEEecccccccC
Q 002031 280 HQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 319 (977)
Q Consensus 280 ~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~ 319 (977)
..+|..|++|+|+||.|||++.+ +.++|+|||++..+.
T Consensus 115 ~~lH~~~ivH~dikp~Nil~~~~--~~~kl~Dfg~~~~~~ 152 (292)
T 3o0g_A 115 GFCHSRNVLHRDLKPQNLLINRN--GELKLANFGLARAFG 152 (292)
T ss_dssp HHHHHTTEECCCCSGGGEEECTT--SCEEECCCTTCEECC
T ss_pred HHHHhCCeecCCCCHHHEEEcCC--CCEEEeecccceecC
Confidence 88999999999999999999865 899999999997664
|
| >3uzp_A CKI-delta, CKID, casein kinase I isoform delta; CK1D, inhibitor, PF670462, transferase-transferase I complex; HET: 0CK; 1.94A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 1cki_A 1ckj_A | Back alignment and structure |
|---|
Probab=99.38 E-value=5.3e-13 Score=145.98 Aligned_cols=138 Identities=21% Similarity=0.325 Sum_probs=97.6
Q ss_pred cccccccccEEEEEEe-cCCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCcHHHH
Q 002031 124 TPLATASIAQVHRATL-VDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (977)
Q Consensus 124 ~piasaSigqV~~A~l-~~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea 202 (977)
+.||+|++|.||+|+. .+|+.||||+....... -++.+|+
T Consensus 15 ~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~---------------------------------------~~~~~e~ 55 (296)
T 3uzp_A 15 RKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTKH---------------------------------------PQLHIES 55 (296)
T ss_dssp EEEEEETTEEEEEEEETTTTEEEEEEEEESCSSC---------------------------------------CHHHHHH
T ss_pred EEEccCCCeEEEEEEEcCCCcEEEEEEecCCcch---------------------------------------hHHHHHH
Confidence 6799999999999997 58999999987543210 0244566
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceee---e-cCCceEEeeccCCCCCCChHHHHhcCCCHHHHHHHHHHHH
Q 002031 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVI---Q-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY 278 (977)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~---~-~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~ 278 (977)
+.+.++.+. ..+|.+. . ....++||||+ |.+|.++.......++...+...+.+++
T Consensus 56 ~~l~~l~~~-------------------~~i~~~~~~~~~~~~~~lv~e~~-~~~L~~~~~~~~~~~~~~~~~~i~~qi~ 115 (296)
T 3uzp_A 56 KIYKMMQGG-------------------VGIPTIRWCGAEGDYNVMVMELL-GPSLEDLFNFCSRKFSLKTVLLLADQMI 115 (296)
T ss_dssp HHHHHHTTS-------------------TTCCCEEEEEEETTEEEEEEECC-CCBHHHHHHHTTTCCCHHHHHHHHHHHH
T ss_pred HHHHHhhcC-------------------CCCCccccccCCCCceEEEEEec-CCCHHHHHHhhccCCCHHHHHHHHHHHH
Confidence 666555431 1122222 1 34558999999 8888887543344567666666666655
Q ss_pred --HHHHHhcCccccCCCCCCeEEcc-CCCCceEEEecccccccCH
Q 002031 279 --AHQIYVDGFFNGDPHPGNFLVSK-DPPHRPILLDFGLTKKLSS 320 (977)
Q Consensus 279 --l~~i~~~G~~H~D~hPgNIlv~~-~~~g~i~LiDFG~~~~l~~ 320 (977)
+..+|..|++|+|+||.|||++. +.++.++|+|||++..+..
T Consensus 116 ~~l~~lH~~~ivH~dlkp~NIl~~~~~~~~~~kl~Dfg~~~~~~~ 160 (296)
T 3uzp_A 116 SRIEYIHSKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRD 160 (296)
T ss_dssp HHHHHHHHTTEECSCCCGGGEEECCGGGTTCEEECCCTTCEECBC
T ss_pred HHHHHHHhCCeeeCCCCHHHeEEecCCCCCeEEEeeCCCcccccc
Confidence 88899999999999999999941 1237899999999987643
|
| >2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A* | Back alignment and structure |
|---|
Probab=99.38 E-value=2.8e-13 Score=153.12 Aligned_cols=139 Identities=13% Similarity=0.112 Sum_probs=93.2
Q ss_pred cccccccccEEEEEEec-CCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCcHHHH
Q 002031 124 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (977)
Q Consensus 124 ~piasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea 202 (977)
+.||.|++|.||+|+.+ +|+.||||+.+......- .+. -.+..|.
T Consensus 26 ~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~-~~~---------------------------------~~~~~E~ 71 (353)
T 2i0e_A 26 MVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQD-DDV---------------------------------ECTMVEK 71 (353)
T ss_dssp EEEEEETTEEEEEEEETTEEEEEEEEEEEHHHHHHT-TCH---------------------------------HHHHHHH
T ss_pred EEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhcc-hHH---------------------------------HHHHHHH
Confidence 68999999999999985 589999999864311000 000 0112233
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeee----cCCceEEeeccCCCCCCChHHHHhcCCCHHHHHHHHHHHH
Q 002031 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ----SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY 278 (977)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~----~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~ 278 (977)
+.+..+. .+ ..|+.++. ....+|||||++|++|.+.... ...++...+...+.+++
T Consensus 72 ~~l~~~~-----------------~h--p~iv~l~~~~~~~~~~~lv~E~~~gg~L~~~l~~-~~~~~~~~~~~~~~qi~ 131 (353)
T 2i0e_A 72 RVLALPG-----------------KP--PFLTQLHSCFQTMDRLYFVMEYVNGGDLMYHIQQ-VGRFKEPHAVFYAAEIA 131 (353)
T ss_dssp HHHTCTT-----------------CC--TTBCCEEEEEECSSEEEEEEECCCSCBHHHHHHH-HSSCCHHHHHHHHHHHH
T ss_pred HHHHhcC-----------------CC--CEEeeEEEEEEcCCEEEEEEeCCCCCcHHHHHHh-cCCCCHHHHHHHHHHHH
Confidence 2222110 11 12333332 3556899999999999876432 23466666555555544
Q ss_pred --HHHHHhcCccccCCCCCCeEEccCCCCceEEEeccccccc
Q 002031 279 --AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKL 318 (977)
Q Consensus 279 --l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l 318 (977)
+..+|..|++|||+||+|||++.+ |.++|+|||++...
T Consensus 132 ~aL~~LH~~givHrDlkp~NIll~~~--g~vkL~DFG~a~~~ 171 (353)
T 2i0e_A 132 IGLFFLQSKGIIYRDLKLDNVMLDSE--GHIKIADFGMCKEN 171 (353)
T ss_dssp HHHHHHHHTTCBCCCCCGGGEEECTT--SCEEECCCTTCBCC
T ss_pred HHHHHHHHCCEEeccCCHHHEEEcCC--CcEEEEeCCccccc
Confidence 888999999999999999999865 89999999998764
|
| >1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=99.38 E-value=4.8e-13 Score=149.66 Aligned_cols=138 Identities=17% Similarity=0.167 Sum_probs=96.6
Q ss_pred cccccccccEEEEEEec------CCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccC
Q 002031 124 TPLATASIAQVHRATLV------DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELD 197 (977)
Q Consensus 124 ~piasaSigqV~~A~l~------~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld 197 (977)
+.||+|++|.||+|+.+ +++.||||+.++....... -.
T Consensus 53 ~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~------------------------------------~~ 96 (343)
T 1luf_A 53 RDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQ------------------------------------AD 96 (343)
T ss_dssp EEEEECSSCEEEEEEEETSSTTSSEEEEEEEECCTTCCHHHH------------------------------------HH
T ss_pred eeeeecCCeeEEEEEecCcCCCCCceeEEEEEeccccCHHHH------------------------------------HH
Confidence 67999999999999974 3589999998764321110 02
Q ss_pred cHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeee----cCCceEEeeccCCCCCCChHHHHh-----------
Q 002031 198 FNSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ----SSETVLILEFMDGIRLNDCESLEA----------- 262 (977)
Q Consensus 198 ~~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~----~~~~vLVmE~i~G~~L~~~~~~~~----------- 262 (977)
|.+|++.+.++.+ -.|++++. ....+|||||++|.+|.++.....
T Consensus 97 ~~~E~~~l~~l~h--------------------p~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~ 156 (343)
T 1luf_A 97 FQREAALMAEFDN--------------------PNIVKLLGVCAVGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSD 156 (343)
T ss_dssp HHHHHHHHHTCCC--------------------TTBCCEEEEECSSSSCEEEEECCTTCBHHHHHHHTCC----------
T ss_pred HHHHHHHHHhCCC--------------------CCEEEEEEEEccCCceEEEEecCCCCcHHHHHHHhCccccccccccc
Confidence 3455555554421 12333332 456789999999999988743211
Q ss_pred ------------cCCCHHHHHHHHHHHH--HHHHHhcCccccCCCCCCeEEccCCCCceEEEecccccccC
Q 002031 263 ------------FGVNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 319 (977)
Q Consensus 263 ------------~~~~~~~l~~~l~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~ 319 (977)
..++...+...+.+++ +..+|..|++|+|+||.||+++.+ +.++|+|||++..+.
T Consensus 157 ~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIl~~~~--~~~kl~Dfg~~~~~~ 225 (343)
T 1luf_A 157 LSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYLSERKFVHRDLATRNCLVGEN--MVVKIADFGLSRNIY 225 (343)
T ss_dssp ------------CCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECGG--GCEEECCCSCHHHHT
T ss_pred ccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCcceEEECCC--CeEEEeecCCCcccc
Confidence 2345555555555544 888999999999999999999865 899999999987654
|
| >4hgt_A Casein kinase I isoform delta; CK1D, inhibitor, transferase-transferase inhibitor C; HET: 15G; 1.80A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 3uzp_A* 4hnf_A* 1cki_A 1ckj_A 4hni_A* 4hok_A | Back alignment and structure |
|---|
Probab=99.38 E-value=8.6e-13 Score=144.15 Aligned_cols=138 Identities=20% Similarity=0.311 Sum_probs=97.0
Q ss_pred cccccccccEEEEEEe-cCCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCcHHHH
Q 002031 124 TPLATASIAQVHRATL-VDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (977)
Q Consensus 124 ~piasaSigqV~~A~l-~~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea 202 (977)
+.||+|++|.||+|+. .+|+.||||+...... .-.+.+|.
T Consensus 15 ~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~---------------------------------------~~~~~~e~ 55 (296)
T 4hgt_A 15 RKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTK---------------------------------------HPQLHIES 55 (296)
T ss_dssp EEEEECSSSEEEEEEETTTTEEEEEEEEEC------------------------------------------CCCHHHHH
T ss_pred eeecCCCCeEEEEEEEcCCCceEEEEeeccccc---------------------------------------chHHHHHH
Confidence 6799999999999997 5899999998543211 01345566
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceee-e-cCCceEEeeccCCCCCCChHHHHhcCCCHHHHHHHHHHHH--
Q 002031 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVI-Q-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY-- 278 (977)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~-~-~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~-- 278 (977)
..+.++.+. ..+..-..+ . ....++||||+ |.+|.++.......++...+...+.+++
T Consensus 56 ~~l~~l~~~-----------------~~i~~~~~~~~~~~~~~lv~e~~-~~~L~~~~~~~~~~~~~~~~~~i~~qi~~~ 117 (296)
T 4hgt_A 56 KIYKMMQGG-----------------VGIPTIRWCGAEGDYNVMVMELL-GPSLEDLFNFCSRKFSLKTVLLLADQMISR 117 (296)
T ss_dssp HHHHHHTTS-----------------TTCCCEEEEEEETTEEEEEEECC-CCBHHHHHHHTTSCCCHHHHHHHHHHHHHH
T ss_pred HHHHHhcCC-----------------CCCCeeeeecCCCCceEEEEEcc-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHH
Confidence 665555431 111111112 1 44568999999 8888877543344567776666666655
Q ss_pred HHHHHhcCccccCCCCCCeEE---ccCCCCceEEEecccccccCH
Q 002031 279 AHQIYVDGFFNGDPHPGNFLV---SKDPPHRPILLDFGLTKKLSS 320 (977)
Q Consensus 279 l~~i~~~G~~H~D~hPgNIlv---~~~~~g~i~LiDFG~~~~l~~ 320 (977)
+..+|..|++|+|+||.|||+ +.+ +.++|+|||++..+..
T Consensus 118 l~~LH~~~ivH~Dlkp~NIl~~~~~~~--~~~kL~Dfg~a~~~~~ 160 (296)
T 4hgt_A 118 IEYIHSKNFIHRDVKPDNFLMGLGKKG--NLVYIIDFGLAKKYRD 160 (296)
T ss_dssp HHHHHHTTEECSCCSGGGEEECCGGGT--TCEEECCCTTCEECBC
T ss_pred HHHHHHCCeecCCCCHHHeeeeccCCC--CeEEEecCccceeccC
Confidence 889999999999999999999 544 7899999999987643
|
| >3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A | Back alignment and structure |
|---|
Probab=99.38 E-value=7e-13 Score=149.57 Aligned_cols=148 Identities=18% Similarity=0.165 Sum_probs=96.5
Q ss_pred cccccccccEEEEEEec-CCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCcHHHH
Q 002031 124 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (977)
Q Consensus 124 ~piasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea 202 (977)
+.||+|++|.||+|+.+ +|+.||||+.+...... ... ...-.+.+|+
T Consensus 30 ~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~------------------~~~--------------~~~~~~~~E~ 77 (351)
T 3c0i_A 30 EVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTS------------------SPG--------------LSTEDLKREA 77 (351)
T ss_dssp EEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHT------------------SSS--------------CCHHHHHHHH
T ss_pred eEEeeCCCEEEEEEEECCCCCEEEEEEEEhhhccc------------------ccc--------------chHHHHHHHH
Confidence 57999999999999974 79999999875321000 000 0011245566
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeee-cCCceEEeeccCCCCCCChHHHHhc---CCCHHHHHHHHHHHH
Q 002031 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAF---GVNKQKVVEEITRAY 278 (977)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLVmE~i~G~~L~~~~~~~~~---~~~~~~l~~~l~~~~ 278 (977)
..+..+.+ ..-+.+-.++. ....+|||||++|.+|.+....... .++...+...+.+++
T Consensus 78 ~~l~~l~h-----------------pnIv~~~~~~~~~~~~~lv~e~~~g~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~ 140 (351)
T 3c0i_A 78 SICHMLKH-----------------PHIVELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQIL 140 (351)
T ss_dssp HHHHHCCC-----------------TTBCCEEEEEEETTEEEEEEECCSSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHH
T ss_pred HHHHhCCC-----------------CCCCcEEEEEEeCCEEEEEEeCCCCCCHHHHHHHhcccCCCCCHHHHHHHHHHHH
Confidence 65555422 11122222333 4556899999999998765432211 245555555555544
Q ss_pred --HHHHHhcCccccCCCCCCeEEccCC-CCceEEEecccccccCH
Q 002031 279 --AHQIYVDGFFNGDPHPGNFLVSKDP-PHRPILLDFGLTKKLSS 320 (977)
Q Consensus 279 --l~~i~~~G~~H~D~hPgNIlv~~~~-~g~i~LiDFG~~~~l~~ 320 (977)
+..+|..|++|+|+||.|||++.++ .+.++|+|||++..+..
T Consensus 141 ~al~~lH~~~ivHrDlkp~NIl~~~~~~~~~vkl~Dfg~a~~~~~ 185 (351)
T 3c0i_A 141 EALRYCHDNNIIHRDVKPHCVLLASKENSAPVKLGGFGVAIQLGE 185 (351)
T ss_dssp HHHHHHHHTTEECSCCSGGGEEECSSSTTCCEEECCCTTCEECCT
T ss_pred HHHHHHHHCCceeccCChHHeEEecCCCCCcEEEecCcceeEecC
Confidence 8889999999999999999998542 24599999999987754
|
| >3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.38 E-value=1.3e-12 Score=149.19 Aligned_cols=139 Identities=19% Similarity=0.237 Sum_probs=97.4
Q ss_pred cccccccccEEEEEEec--------CCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccc
Q 002031 124 TPLATASIAQVHRATLV--------DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKE 195 (977)
Q Consensus 124 ~piasaSigqV~~A~l~--------~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~E 195 (977)
+.||.|++|.||+|+.. +++.||||+.+....... .
T Consensus 75 ~~LG~G~~g~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~~~~~---~--------------------------------- 118 (382)
T 3tt0_A 75 KPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKD---L--------------------------------- 118 (382)
T ss_dssp EEEEECSSEEEEEEEEETSSTTCTTCEEEEEEEEECTTCCHHH---H---------------------------------
T ss_pred eEEecCCCeEEEEEEEccccccccccceEEEEEeeccccCHHH---H---------------------------------
Confidence 68999999999999862 346899999876432111 0
Q ss_pred cCcHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceee---e-cCCceEEeeccCCCCCCChHHHHh---------
Q 002031 196 LDFNSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVI---Q-SSETVLILEFMDGIRLNDCESLEA--------- 262 (977)
Q Consensus 196 ld~~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~---~-~~~~vLVmE~i~G~~L~~~~~~~~--------- 262 (977)
-++.+|++.+.++.+ ++ .|.+++ . ....+|||||++|.+|.++.....
T Consensus 119 ~~~~~E~~~l~~l~~-----------------hp--nIv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~ 179 (382)
T 3tt0_A 119 SDLISEMEMMKMIGK-----------------HK--NIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYN 179 (382)
T ss_dssp HHHHHHHHHHHHHCC-----------------CT--TBCCEEEEECSSSSCEEEEECCTTCBHHHHHHHTCCSSSSSCCC
T ss_pred HHHHHHHHHHHHhcC-----------------Cc--hhhhheeeeccCCceEEEEEecCCCcHHHHHHHhcccccccccc
Confidence 023455556555521 11 123333 2 456789999999999988754321
Q ss_pred ------cCCCHHHHHHHHHHHH--HHHHHhcCccccCCCCCCeEEccCCCCceEEEecccccccC
Q 002031 263 ------FGVNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 319 (977)
Q Consensus 263 ------~~~~~~~l~~~l~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~ 319 (977)
..++...+...+.+++ +..+|..|++|+|+||.|||++.+ +.++|+|||++..+.
T Consensus 180 ~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~--~~~kL~DFG~a~~~~ 242 (382)
T 3tt0_A 180 PSHNPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTED--NVMKIADFGLARDIH 242 (382)
T ss_dssp CCSSCCCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTT--CCEEECSCSCCCCSS
T ss_pred cccccccccCHHHHHHHHHHHHHHHHHHHhCCEecCCCCcceEEEcCC--CcEEEcccCcccccc
Confidence 1256666666665555 888999999999999999999865 899999999998654
|
| >1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A* | Back alignment and structure |
|---|
Probab=99.37 E-value=9.5e-13 Score=148.38 Aligned_cols=152 Identities=16% Similarity=0.146 Sum_probs=100.4
Q ss_pred CChhhcccccCccccccccccEEEEEEe-cCCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhh
Q 002031 112 ESMGGMFMDFVETPLATASIAQVHRATL-VDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCK 190 (977)
Q Consensus 112 ~~~~~~f~~~d~~piasaSigqV~~A~l-~~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~ 190 (977)
....+.|... +.||+|++|.||+|+. .+|+.||||+........- .. .
T Consensus 50 ~~~~~~y~~~--~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~----~~--------------------~----- 98 (348)
T 1u5q_A 50 DDPEKLFSDL--REIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSN----EK--------------------W----- 98 (348)
T ss_dssp SCHHHHEEEE--EEEEECSSEEEEEEEETTTTEEEEEEEEESCSSCHH----HH--------------------H-----
T ss_pred cchhhheeee--eEEccCCCEEEEEEEEccCCeEEEEEEEccccccch----HH--------------------H-----
Confidence 3455555543 5699999999999997 5899999998864321110 00 0
Q ss_pred hcccccCcHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeee-cCCceEEeeccCCCCCCChHHHHhcCCCHHH
Q 002031 191 EAPKELDFNSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAFGVNKQK 269 (977)
Q Consensus 191 ~l~~Eld~~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~ 269 (977)
-++.+|++.+.++++ ..-+.+-.++. ....+|||||++| ++.+........++...
T Consensus 99 -----~~~~~E~~~l~~l~h-----------------pniv~~~~~~~~~~~~~lv~e~~~g-~l~~~l~~~~~~l~~~~ 155 (348)
T 1u5q_A 99 -----QDIIKEVRFLQKLRH-----------------PNTIQYRGCYLREHTAWLVMEYCLG-SASDLLEVHKKPLQEVE 155 (348)
T ss_dssp -----HHHHHHHHHHHHCCC-----------------TTBCCEEEEEEETTEEEEEEECCSE-EHHHHHHHHTSCCCHHH
T ss_pred -----HHHHHHHHHHHhCCC-----------------CCEeeEEEEEEECCeEEEEEecCCC-CHHHHHHHhcCCCCHHH
Confidence 023455555555422 11122222222 4566899999986 44444333334566666
Q ss_pred HHHHHHHHH--HHHHHhcCccccCCCCCCeEEccCCCCceEEEecccccccC
Q 002031 270 VVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 319 (977)
Q Consensus 270 l~~~l~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~ 319 (977)
+...+.+++ +..+|..|++|+|+||.|||++.+ +.++|+|||++..+.
T Consensus 156 ~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~--~~~kL~DfG~a~~~~ 205 (348)
T 1u5q_A 156 IAAVTHGALQGLAYLHSHNMIHRDVKAGNILLSEP--GLVKLGDFGSASIMA 205 (348)
T ss_dssp HHHHHHHHHHHHHHHHHTTCBCCCCSGGGEEEETT--TEEEECCCTTCBSSS
T ss_pred HHHHHHHHHHHHHHHHhCCeeeCCCCHHHEEECCC--CCEEEeeccCceecC
Confidence 655555544 888999999999999999999965 899999999987764
|
| >4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A* | Back alignment and structure |
|---|
Probab=99.37 E-value=8.2e-13 Score=144.03 Aligned_cols=142 Identities=18% Similarity=0.174 Sum_probs=96.9
Q ss_pred cccccccccEEEEEEec-CC-------CEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccc
Q 002031 124 TPLATASIAQVHRATLV-DG-------RQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKE 195 (977)
Q Consensus 124 ~piasaSigqV~~A~l~-~G-------~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~E 195 (977)
+.||.|++|.||+|+.+ +| +.||||+.........
T Consensus 14 ~~lg~G~~g~V~~~~~~~~~~~~~~~~~~va~K~~~~~~~~~~------------------------------------- 56 (289)
T 4fvq_A 14 ESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYS------------------------------------- 56 (289)
T ss_dssp EEEEEETTEEEEEEEEEEECGGGCEEEEEEEEEEECGGGGGGH-------------------------------------
T ss_pred eeeccCCCceEEEEEEecccccccccchhhhhhhcccccHHHH-------------------------------------
Confidence 67999999999999874 34 5799998754321110
Q ss_pred cCcHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeee-cCCceEEeeccCCCCCCChHHHHhcCCCHHHHHHHH
Q 002031 196 LDFNSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEI 274 (977)
Q Consensus 196 ld~~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l 274 (977)
-.+.+|++.+.++.+ ..-+.+-.++. ....++||||++|.+|.++.......++...+...+
T Consensus 57 ~~~~~E~~~l~~l~h-----------------~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~ 119 (289)
T 4fvq_A 57 ESFFEAASMMSKLSH-----------------KHLVLNYGVCVCGDENILVQEFVKFGSLDTYLKKNKNCINILWKLEVA 119 (289)
T ss_dssp HHHHHHHHHHHTSCC-----------------TTBCCEEEEECCTTCCEEEEECCTTCBHHHHHHHTGGGCCHHHHHHHH
T ss_pred HHHHHHHHHHHhCCC-----------------CCEeEEEEEEEeCCCCEEEEECCCCCCHHHHHHhCCCCCCHHHHHHHH
Confidence 023445555444321 11122222222 456789999999999988755433336666665555
Q ss_pred HHHH--HHHHHhcCccccCCCCCCeEEccCCCCc--------eEEEecccccccCHH
Q 002031 275 TRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHR--------PILLDFGLTKKLSSS 321 (977)
Q Consensus 275 ~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~--------i~LiDFG~~~~l~~~ 321 (977)
.+++ +..+|..|++|+|+||+|||++.+ +. ++|+|||++......
T Consensus 120 ~qi~~~L~~LH~~~ivH~Dlkp~NIll~~~--~~~~~~~~~~~kl~Dfg~~~~~~~~ 174 (289)
T 4fvq_A 120 KQLAAAMHFLEENTLIHGNVCAKNILLIRE--EDRKTGNPPFIKLSDPGISITVLPK 174 (289)
T ss_dssp HHHHHHHHHHHHTTCCCCCCCGGGEEEEEC--CBGGGTBCCEEEECCCCSCTTTSCH
T ss_pred HHHHHHHHHHhhCCeECCCcCcceEEEecC--CcccccccceeeeccCcccccccCc
Confidence 5544 888999999999999999999866 44 999999999877544
|
| >3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} SCOP: d.144.1.0 | Back alignment and structure |
|---|
Probab=99.37 E-value=6.4e-13 Score=143.47 Aligned_cols=143 Identities=19% Similarity=0.229 Sum_probs=89.8
Q ss_pred ccccccccccEEEEEEecCCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCcHHHH
Q 002031 123 ETPLATASIAQVHRATLVDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (977)
Q Consensus 123 ~~piasaSigqV~~A~l~~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea 202 (977)
.+.||.|++|.||+|+. .|+.||||+.+.......... .+ .+.+|+
T Consensus 12 ~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~~~~~~~~~-----------------------~~----------~~~~e~ 57 (271)
T 3dtc_A 12 EEIIGIGGFGKVYRAFW-IGDEVAVKAARHDPDEDISQT-----------------------IE----------NVRQEA 57 (271)
T ss_dssp EEEEEEETTEEEEEEEE-TTEEEEEEEC----------C-----------------------HH----------HHHHHH
T ss_pred eeeeccCCCeEEEEEEE-cCCeEEEEEEecCCcccHHHH-----------------------HH----------HHHHHH
Confidence 36899999999999997 589999998765332111100 00 234455
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeee----cCCceEEeeccCCCCCCChHHHHhcCCCHHHHHHHHHHHH
Q 002031 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ----SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY 278 (977)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~----~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~ 278 (977)
+.+..+++ -.|++++. ....++||||++|.+|.++. ....++...+...+.+++
T Consensus 58 ~~l~~l~h--------------------~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~--~~~~~~~~~~~~i~~~l~ 115 (271)
T 3dtc_A 58 KLFAMLKH--------------------PNIIALRGVCLKEPNLCLVMEFARGGPLNRVL--SGKRIPPDILVNWAVQIA 115 (271)
T ss_dssp HHHHHCCC--------------------TTBCCEEEEECCC--CEEEEECCTTEEHHHHH--TSSCCCHHHHHHHHHHHH
T ss_pred HHHHhcCC--------------------CCEeeEEEEEecCCceEEEEEcCCCCCHHHHh--hcCCCCHHHHHHHHHHHH
Confidence 55444321 11233332 45578999999999987763 344566666666555554
Q ss_pred --HHHHHhcC---ccccCCCCCCeEEccC------CCCceEEEecccccccCHH
Q 002031 279 --AHQIYVDG---FFNGDPHPGNFLVSKD------PPHRPILLDFGLTKKLSSS 321 (977)
Q Consensus 279 --l~~i~~~G---~~H~D~hPgNIlv~~~------~~g~i~LiDFG~~~~l~~~ 321 (977)
+..+|..| ++|+|+||.||+++.+ .++.++|+|||++..+...
T Consensus 116 ~~l~~lH~~~~~~i~H~dikp~Nil~~~~~~~~~~~~~~~kl~Dfg~~~~~~~~ 169 (271)
T 3dtc_A 116 RGMNYLHDEAIVPIIHRDLKSSNILILQKVENGDLSNKILKITDFGLAREWHRT 169 (271)
T ss_dssp HHHHHHHHSSSSCCCCSCCSGGGEEESSCCSSSCCSSCCEEECCCCC-------
T ss_pred HHHHHHHhCCCCceeecCCchHHEEEecccccccccCcceEEccCCcccccccc
Confidence 88899999 8999999999999852 1478999999999866543
|
| >3en9_A Glycoprotease, O-sialoglycoprotein endopeptidase/protein kinase; endopeptidase activity, protein kinase activity; HET: TBR; 2.67A {Methanocaldococcus jannaschii} PDB: 3enh_A* 2vwb_A* | Back alignment and structure |
|---|
Probab=99.37 E-value=1.3e-12 Score=155.79 Aligned_cols=144 Identities=15% Similarity=0.208 Sum_probs=93.5
Q ss_pred cCccccccccccEEEEEEecCCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCcHH
Q 002031 121 FVETPLATASIAQVHRATLVDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNS 200 (977)
Q Consensus 121 ~d~~piasaSigqV~~A~l~~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~ 200 (977)
+..+.||+|++|+||+|+ ..++.|++|+..+.....-..+ ++. ..-.+.+
T Consensus 339 ~~~~~LG~G~fg~Vy~~~-~~~~~~~~k~~~~~~~~~~~~~------------------------~~~-----~~~~~~~ 388 (540)
T 3en9_A 339 IPEHLIGKGAEADIKRDS-YLDFDVIIKERVKKGYRDERLD------------------------ENI-----RKSRTAR 388 (540)
T ss_dssp ---------CCEEEEEEE-CSSCEEEEEEECCCTTSCHHHH------------------------HHH-----HHHHHHH
T ss_pred CCCCEEeeCCCEEEEEEE-ECCCeEEEEEEecccccchhhh------------------------hHH-----HHHHHHH
Confidence 345689999999999995 4689999998765321110000 000 0013567
Q ss_pred HHHHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeee--cCCceEEeeccCCCCCCChHHHHhcCCCHHHHHHHHHHHH
Q 002031 201 EAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ--SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY 278 (977)
Q Consensus 201 Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~--~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~ 278 (977)
|++.+.++++ +.+..|..+. ....+|||||++|.+|.++... ...++..+++.
T Consensus 389 E~~il~~l~h------------------~nIv~~~~~~~~~~~~~lVmE~~~ggsL~~~l~~------~~~i~~qi~~a- 443 (540)
T 3en9_A 389 EARYLALVKD------------------FGIPAPYIFDVDLDNKRIMMSYINGKLAKDVIED------NLDIAYKIGEI- 443 (540)
T ss_dssp HHHHHHHGGG------------------GTCCCCCEEEEETTTTEEEEECCCSEEHHHHSTT------CTHHHHHHHHH-
T ss_pred HHHHHHhcCC------------------CCcCceEEEEEeCCccEEEEECCCCCCHHHHHHH------HHHHHHHHHHH-
Confidence 7777777743 2344456554 5677999999999998776321 22344444443
Q ss_pred HHHHHhcCccccCCCCCCeEEccCCCCceEEEecccccccCHHHH
Q 002031 279 AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSSSMK 323 (977)
Q Consensus 279 l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~~~r 323 (977)
+..+|..|++|||+||+|||++. +++|+|||+++.++....
T Consensus 444 L~~LH~~gIiHrDiKp~NILl~~----~~kL~DFGla~~~~~~~~ 484 (540)
T 3en9_A 444 VGKLHKNDVIHNDLTTSNFIFDK----DLYIIDFGLGKISNLDED 484 (540)
T ss_dssp HHHHHHTTEECTTCCTTSEEESS----SEEECCCTTCEECCCHHH
T ss_pred HHHHHHCcCccCCCCHHHEEECC----eEEEEECccCEECCCccc
Confidence 77899999999999999999973 899999999999876543
|
| >3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A* | Back alignment and structure |
|---|
Probab=99.37 E-value=9.8e-13 Score=144.66 Aligned_cols=146 Identities=15% Similarity=0.210 Sum_probs=101.6
Q ss_pred ChhhcccccCccccccccccEEEEEEe-cCCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhh
Q 002031 113 SMGGMFMDFVETPLATASIAQVHRATL-VDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKE 191 (977)
Q Consensus 113 ~~~~~f~~~d~~piasaSigqV~~A~l-~~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~ 191 (977)
...+.|... +.||+|++|+||+|+. .+|+.||||+.+....... .+
T Consensus 19 ~~~~~y~~~--~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~--------------------------~~----- 65 (303)
T 3a7i_A 19 DPEELFTKL--EKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDE--------------------------IE----- 65 (303)
T ss_dssp CGGGTEEEE--EEEEECSSSEEEEEEETTTCCEEEEEEEETTTCSTT--------------------------HH-----
T ss_pred ChHHHHHHh--hhhcccCCeEEEEEEECCCCcEEEEEEecccccHHH--------------------------HH-----
Confidence 445555543 5799999999999997 4799999999865421110 00
Q ss_pred cccccCcHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceee---e-cCCceEEeeccCCCCCCChHHHHhcCCCH
Q 002031 192 APKELDFNSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVI---Q-SSETVLILEFMDGIRLNDCESLEAFGVNK 267 (977)
Q Consensus 192 l~~Eld~~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~---~-~~~~vLVmE~i~G~~L~~~~~~~~~~~~~ 267 (977)
++.+|+..+.++.+ ..|++++ . ....++||||++|.+|.++. ....++.
T Consensus 66 -----~~~~e~~~l~~l~h--------------------~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~--~~~~~~~ 118 (303)
T 3a7i_A 66 -----DIQQEITVLSQCDS--------------------PYVTKYYGSYLKDTKLWIIMEYLGGGSALDLL--EPGPLDE 118 (303)
T ss_dssp -----HHHHHHHHHHHCCC--------------------TTBCCEEEEEEETTEEEEEEECCTTEEHHHHH--TTSCCCH
T ss_pred -----HHHHHHHHHHhCCC--------------------CCEeEEEEEEecCCeEEEEEEeCCCCcHHHHH--hcCCCCH
Confidence 23345544443321 1122332 2 45568999999999988763 3445666
Q ss_pred HHHHHHHHHHH--HHHHHhcCccccCCCCCCeEEccCCCCceEEEecccccccCH
Q 002031 268 QKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 320 (977)
Q Consensus 268 ~~l~~~l~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 320 (977)
..+...+.+++ +..+|..|++|+|+||.||+++.+ ++++|+|||++..+..
T Consensus 119 ~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~Nil~~~~--~~~kl~Dfg~~~~~~~ 171 (303)
T 3a7i_A 119 TQIATILREILKGLDYLHSEKKIHRDIKAANVLLSEH--GEVKLADFGVAGQLTD 171 (303)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTT--SCEEECCCTTCEECBT
T ss_pred HHHHHHHHHHHHHHHHHHHCCCccCCCChheEEECCC--CCEEEeecccceecCc
Confidence 66666655554 888999999999999999999865 8999999999977643
|
| >3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A* | Back alignment and structure |
|---|
Probab=99.36 E-value=6.4e-13 Score=148.00 Aligned_cols=139 Identities=14% Similarity=0.155 Sum_probs=93.7
Q ss_pred cccccccccEEEEEEec-CCCE----EEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCc
Q 002031 124 TPLATASIAQVHRATLV-DGRQ----VVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDF 198 (977)
Q Consensus 124 ~piasaSigqV~~A~l~-~G~~----VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~ 198 (977)
+.||+|++|.||+|+.. +|+. ||+|+....... .....+
T Consensus 19 ~~lG~G~~g~Vy~~~~~~~~~~~~~kv~~K~~~~~~~~------------------------------------~~~~~~ 62 (325)
T 3kex_A 19 KVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGR------------------------------------QSFQAV 62 (325)
T ss_dssp EEEECCSSCEEEEEEECCTTCSCCEEEEEEEECCTTSC------------------------------------SCBCSC
T ss_pred eeeeecCCceEEEEEEcCCCceEEEEEEEEeccccccH------------------------------------HHHHHH
Confidence 68999999999999974 5655 777765432110 011134
Q ss_pred HHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceee---ecCCceEEeeccCCCCCCChHHHHhcCCCHHHHHHHHH
Q 002031 199 NSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVI---QSSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEIT 275 (977)
Q Consensus 199 ~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~---~~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~ 275 (977)
.+|+..+.++.+ -.|.+++ .....++||||++|.+|.+........++...+...+.
T Consensus 63 ~~e~~~l~~l~h--------------------~~iv~~~~~~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~ 122 (325)
T 3kex_A 63 TDHMLAIGSLDH--------------------AHIVRLLGLCPGSSLQLVTQYLPLGSLLDHVRQHRGALGPQLLLNWGV 122 (325)
T ss_dssp CHHHHHHHTCCC--------------------TTBCCEEEEECBSSEEEEEECCTTCBSHHHHHSSGGGSCTTHHHHHHH
T ss_pred HHHHHHHhcCCC--------------------CCcCeEEEEEcCCccEEEEEeCCCCCHHHHHHHccccCCHHHHHHHHH
Confidence 455555444321 1223333 25567899999999999876432222344445555444
Q ss_pred HHH--HHHHHhcCccccCCCCCCeEEccCCCCceEEEecccccccCH
Q 002031 276 RAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 320 (977)
Q Consensus 276 ~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 320 (977)
+++ +..+|..|++|||+||+|||++.+ ++++|+|||++..+..
T Consensus 123 qi~~~l~~lH~~~ivH~Dikp~Nil~~~~--~~~kl~Dfg~a~~~~~ 167 (325)
T 3kex_A 123 QIAKGMYYLEEHGMVHRNLAARNVLLKSP--SQVQVADFGVADLLPP 167 (325)
T ss_dssp HHHHHHHHHHHTTCCCSCCSSTTEEESSS--SCEEECSCSGGGGSCC
T ss_pred HHHHHHHHHHhCCCCCCccchheEEECCC--CeEEECCCCcccccCc
Confidence 444 889999999999999999999865 8999999999987754
|
| >3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A* | Back alignment and structure |
|---|
Probab=99.36 E-value=8.5e-13 Score=144.68 Aligned_cols=75 Identities=17% Similarity=0.156 Sum_probs=60.6
Q ss_pred CceEEeeccCCCCCCChHHHHhcCCCHHHHHHHHHHHH--HHHHH--------hcCccccCCCCCCeEEccCCCCceEEE
Q 002031 241 ETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--AHQIY--------VDGFFNGDPHPGNFLVSKDPPHRPILL 310 (977)
Q Consensus 241 ~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~--l~~i~--------~~G~~H~D~hPgNIlv~~~~~g~i~Li 310 (977)
..+|||||++|.+|.++. ....++...+...+.++. +..+| ..|++|+|+||.|||++.+ +.++|+
T Consensus 80 ~~~lv~e~~~~g~L~~~l--~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dlkp~Nill~~~--~~~kl~ 155 (301)
T 3q4u_A 80 QLWLITHYHEMGSLYDYL--QLTTLDTVSCLRIVLSIASGLAHLHIEIFGTQGKPAIAHRDLKSKNILVKKN--GQCCIA 155 (301)
T ss_dssp EEEEEECCCTTCBHHHHH--TTCCBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBCEEECSCCCGGGEEECTT--SCEEEC
T ss_pred eeEEehhhccCCCHHHHH--hhcccCHHHHHHHHHHHHHHHHHHHHhhhhccCCCCeecCCCChHhEEEcCC--CCEEEe
Confidence 357999999999998774 344566666666665554 88899 9999999999999999865 899999
Q ss_pred ecccccccC
Q 002031 311 DFGLTKKLS 319 (977)
Q Consensus 311 DFG~~~~l~ 319 (977)
|||++..+.
T Consensus 156 Dfg~a~~~~ 164 (301)
T 3q4u_A 156 DLGLAVMHS 164 (301)
T ss_dssp CCTTCEEEE
T ss_pred eCCCeeecc
Confidence 999986553
|
| >2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A* | Back alignment and structure |
|---|
Probab=99.36 E-value=7.7e-13 Score=145.20 Aligned_cols=147 Identities=16% Similarity=0.155 Sum_probs=98.6
Q ss_pred ChhhcccccCccccccccccEEEEEEec-CCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhh
Q 002031 113 SMGGMFMDFVETPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKE 191 (977)
Q Consensus 113 ~~~~~f~~~d~~piasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~ 191 (977)
+..+.|+.. +.||+|++|.||+|+.+ +|+.||||+.........
T Consensus 16 ~~~~~y~i~--~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~--------------------------------- 60 (302)
T 2j7t_A 16 DPNEVWEIV--GELGDGAFGKVYKAKNKETGALAAAKVIETKSEEEL--------------------------------- 60 (302)
T ss_dssp CGGGTEEEE--EEEECSTTCCEEEEEETTTCCEEEEEEEC----CCH---------------------------------
T ss_pred CCccceeec--ceeccCCCeEEEEEEEcCCCcEEEEEEecCCCHHHH---------------------------------
Confidence 344444433 56999999999999985 699999998764321110
Q ss_pred cccccCcHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeee-cCCceEEeeccCCCCCCChHHHHhcCCCHHHH
Q 002031 192 APKELDFNSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAFGVNKQKV 270 (977)
Q Consensus 192 l~~Eld~~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l 270 (977)
-++.+|++.+.++.+ ..-+.+-.++. ....++||||++|.+|.++.......++...+
T Consensus 61 ----~~~~~e~~~l~~l~h-----------------~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~ 119 (302)
T 2j7t_A 61 ----EDYIVEIEILATCDH-----------------PYIVKLLGAYYHDGKLWIMIEFCPGGAVDAIMLELDRGLTEPQI 119 (302)
T ss_dssp ----HHHHHHHHHHHHCCC-----------------TTBCCEEEEEECC-CEEEEEECCTTEEHHHHHHHHTSCCCHHHH
T ss_pred ----HHHHHHHHHHhcCCC-----------------CCEeeeeeeeeeCCeEEEEEEeCCCCcHHHHHHhhccCCCHHHH
Confidence 023445555544321 01111212222 45678999999999998775433455676666
Q ss_pred HHHHHHHH--HHHHHhcCccccCCCCCCeEEccCCCCceEEEecccccc
Q 002031 271 VEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKK 317 (977)
Q Consensus 271 ~~~l~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~ 317 (977)
...+.+++ +..+|..|++|+|+||.||+++.+ +.++|+|||++..
T Consensus 120 ~~~~~~i~~~l~~lH~~~i~H~dlkp~Nil~~~~--~~~kl~Dfg~~~~ 166 (302)
T 2j7t_A 120 QVVCRQMLEALNFLHSKRIIHRDLKAGNVLMTLE--GDIRLADFGVSAK 166 (302)
T ss_dssp HHHHHHHHHHHHHHHHTTCCCCCCSGGGEEECTT--SCEEECCCHHHHH
T ss_pred HHHHHHHHHHHHHHhcCCcccCCCCHHHEEECCC--CCEEEEECCCCcc
Confidence 66665554 888999999999999999999865 8999999998653
|
| >4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.36 E-value=1.1e-12 Score=145.49 Aligned_cols=144 Identities=19% Similarity=0.201 Sum_probs=96.0
Q ss_pred cccccccccEEEEEEec-CCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCcHHHH
Q 002031 124 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (977)
Q Consensus 124 ~piasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea 202 (977)
+.||.|++|.||+|+.+ +|+.||||+.+...... . .+ .+.+|+
T Consensus 15 ~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~---~-----------------------~~----------~~~~E~ 58 (319)
T 4euu_A 15 DILGQGATANVFRGRHKKTGDLFAIKVFNNISFLR---P-----------------------VD----------VQMREF 58 (319)
T ss_dssp EEEEECSSEEEEEEEETTTCCEEEEEEECGGGGGS---C-----------------------HH----------HHHHHH
T ss_pred EEecCCCCeEEEEEEECCCCcEEEEEEeccccccc---h-----------------------HH----------HHHHHH
Confidence 57999999999999985 69999999976421100 0 00 123455
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeee-c--CCceEEeeccCCCCCCChHHHHhc--CCCHHHHHHHHHHH
Q 002031 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-S--SETVLILEFMDGIRLNDCESLEAF--GVNKQKVVEEITRA 277 (977)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~--~~~vLVmE~i~G~~L~~~~~~~~~--~~~~~~l~~~l~~~ 277 (977)
+.+.++++ ..-+.+-.++. . ...+|||||++|.+|.++...... .++...+...+.++
T Consensus 59 ~~l~~l~h-----------------~~iv~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~qi 121 (319)
T 4euu_A 59 EVLKKLNH-----------------KNIVKLFAIEEETTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDV 121 (319)
T ss_dssp HHHHHCCC-----------------TTBCCEEEEEECTTTCCEEEEEECCTTCBHHHHHHSGGGTTCCCHHHHHHHHHHH
T ss_pred HHHHhcCC-----------------CCcceEEEEeecCCCceEEEEEeCCCCCCHHHHHHHhccccCCCHHHHHHHHHHH
Confidence 55554421 01122222222 2 245899999999999877442221 26666666666665
Q ss_pred H--HHHHHhcCccccCCCCCCeEEcc--CCCCceEEEecccccccCH
Q 002031 278 Y--AHQIYVDGFFNGDPHPGNFLVSK--DPPHRPILLDFGLTKKLSS 320 (977)
Q Consensus 278 ~--l~~i~~~G~~H~D~hPgNIlv~~--~~~g~i~LiDFG~~~~l~~ 320 (977)
+ +..+|..|++|+|+||.|||+.. ++++.++|+|||++..+..
T Consensus 122 ~~~L~~LH~~~ivH~Dlkp~NIll~~~~~~~~~~kL~Dfg~a~~~~~ 168 (319)
T 4euu_A 122 VGGMNHLRENGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELED 168 (319)
T ss_dssp HHHHHHHHHTTEECSCCSGGGEEEEECTTSCEEEEECCCTTCEECCT
T ss_pred HHHHHHHHHCCEecCCCCHHHEEEeccCCCCceEEEccCCCceecCC
Confidence 5 88999999999999999999821 1236799999999987754
|
| >3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.36 E-value=1.3e-12 Score=152.20 Aligned_cols=144 Identities=17% Similarity=0.203 Sum_probs=96.5
Q ss_pred cccccccccEEEEEEe-cCCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCcHHHH
Q 002031 124 TPLATASIAQVHRATL-VDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (977)
Q Consensus 124 ~piasaSigqV~~A~l-~~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea 202 (977)
+.||.|++|.||+|+. .+|+.||+|+........ .+. -.+.+|+
T Consensus 17 ~~LG~G~fg~V~~~~~~~~~~~~a~K~i~~~~~~~--~~~---------------------------------~~~~~E~ 61 (444)
T 3soa_A 17 EELGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSA--RDH---------------------------------QKLEREA 61 (444)
T ss_dssp EEEEEC--CEEEEEEETTTTEEEEEEEEESCSCHH--HHH---------------------------------HHHHHHH
T ss_pred EEeccCCCeEEEEEEECCCCcEEEEEEEEcccCCH--HHH---------------------------------HHHHHHH
Confidence 5799999999999987 489999999876432110 000 0234566
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeee-cCCceEEeeccCCCCCCChHHHHhcCCCHHHHHHHHHHHH--H
Q 002031 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--A 279 (977)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~--l 279 (977)
+.+.++.+ ..-+.+-.++. ....+|||||++|.+|.+... ....++...+...+.+++ +
T Consensus 62 ~il~~l~h-----------------pnIv~l~~~~~~~~~~~lv~E~~~gg~L~~~i~-~~~~~~e~~~~~i~~qil~aL 123 (444)
T 3soa_A 62 RICRLLKH-----------------PNIVRLHDSISEEGHHYLIFDLVTGGELFEDIV-AREYYSEADASHCIQQILEAV 123 (444)
T ss_dssp HHHHHCCB-----------------TTBCCEEEEEECSSEEEEEECCCBCCBHHHHHH-HCSCCCHHHHHHHHHHHHHHH
T ss_pred HHHHhCCC-----------------cCCCeEEEEEEECCEEEEEEEeCCCCCHHHHHH-HcCCCCHHHHHHHHHHHHHHH
Confidence 55555422 11122223333 455689999999998876543 223456666555555554 7
Q ss_pred HHHHhcCccccCCCCCCeEEccC-CCCceEEEecccccccCH
Q 002031 280 HQIYVDGFFNGDPHPGNFLVSKD-PPHRPILLDFGLTKKLSS 320 (977)
Q Consensus 280 ~~i~~~G~~H~D~hPgNIlv~~~-~~g~i~LiDFG~~~~l~~ 320 (977)
..+|..|++|||+||+|||++.+ .++.++|+|||++..+..
T Consensus 124 ~~lH~~givHrDlKp~NIll~~~~~~~~vkL~DFG~a~~~~~ 165 (444)
T 3soa_A 124 LHCHQMGVVHRNLKPENLLLASKLKGAAVKLADFGLAIEVEG 165 (444)
T ss_dssp HHHHHTTCBCCCCSSTTEEESBSSTTCCEEECCCSSCBCCCT
T ss_pred HHHHHCCccccCCCHHHEEEeccCCCCcEEEccCceeEEecC
Confidence 88999999999999999999853 247899999999977653
|
| >1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A | Back alignment and structure |
|---|
Probab=99.36 E-value=9e-13 Score=153.92 Aligned_cols=138 Identities=22% Similarity=0.219 Sum_probs=97.1
Q ss_pred cccccccccEEEEEEecCCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCcHHHHH
Q 002031 124 TPLATASIAQVHRATLVDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEAE 203 (977)
Q Consensus 124 ~piasaSigqV~~A~l~~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea~ 203 (977)
+.||+|++|.||+|+. .|+.||||+.+.+... -+|.+|++
T Consensus 199 ~~lG~G~fg~V~~~~~-~~~~vavK~~~~~~~~---------------------------------------~~~~~E~~ 238 (450)
T 1k9a_A 199 QTIGKGEFGDVMLGDY-RGNKVAVKCIKNDATA---------------------------------------QAFLAEAS 238 (450)
T ss_dssp EEEEECSSEEEEEEEE-TTEEEEEEEESSCTTS---------------------------------------HHHHHHHH
T ss_pred eeecCcCCeeEEEEEe-cCCeEEEEEeCCchHH---------------------------------------HHHHHHHH
Confidence 6899999999999997 4889999998754210 02455666
Q ss_pred HHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeee-c-CCceEEeeccCCCCCCChHHHHhcC-CCHHHHHHHHHHHH--
Q 002031 204 NTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-S-SETVLILEFMDGIRLNDCESLEAFG-VNKQKVVEEITRAY-- 278 (977)
Q Consensus 204 n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~-~~~vLVmE~i~G~~L~~~~~~~~~~-~~~~~l~~~l~~~~-- 278 (977)
.+.++++ ..-+.+-.++. . ...+|||||++|.+|.++....... ++...+...+.++.
T Consensus 239 ~l~~l~h-----------------~niv~~~~~~~~~~~~~~iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~~ 301 (450)
T 1k9a_A 239 VMTQLRH-----------------SNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEA 301 (450)
T ss_dssp HHHTCCC-----------------TTBCCEEEEEECTTSCEEEEEECCTTCBHHHHHHHHCTTTCCHHHHHHHHHHHHHH
T ss_pred HHHhccC-----------------CCEEEEEEEEEcCCCceEEEEEecCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHH
Confidence 6555422 11122222222 2 2468999999999998875433221 45555555555554
Q ss_pred HHHHHhcCccccCCCCCCeEEccCCCCceEEEecccccccCH
Q 002031 279 AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 320 (977)
Q Consensus 279 l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 320 (977)
+..+|..|++|||+||.|||++.+ +.++|+|||+++....
T Consensus 302 l~~LH~~~ivHrDlkp~Nill~~~--~~~kl~DfG~a~~~~~ 341 (450)
T 1k9a_A 302 MEYLEGNNFVHRDLAARNVLVSED--NVAKVSDFGLTKEASS 341 (450)
T ss_dssp HHHHHHTTEECSCCCGGGEEECTT--SCEEECCCTTCEECC-
T ss_pred HHHHHhCCeeCCCCCHhhEEECCC--CCEEEeeCCCcccccc
Confidence 888999999999999999999865 8999999999986653
|
| >2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.36 E-value=6.8e-13 Score=149.58 Aligned_cols=140 Identities=19% Similarity=0.247 Sum_probs=88.8
Q ss_pred cccccccccEEEEEEec-CCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCcHHHH
Q 002031 124 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (977)
Q Consensus 124 ~piasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea 202 (977)
+.||+|++|.||+|+.+ +++.||||+.+..... -.+.+|+
T Consensus 59 ~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~---------------------------------------~~~~~E~ 99 (349)
T 2w4o_A 59 SELGRGATSIVYRCKQKGTQKPYALKVLKKTVDK---------------------------------------KIVRTEI 99 (349)
T ss_dssp EEEEECSSEEEEEEEETTTCCEEEEEEEEC-------------------------------------------------C
T ss_pred eEEeeCCCEEEEEEEECCCCcEEEEEEeccchhH---------------------------------------HHHHHHH
Confidence 68999999999999985 6899999998653210 0123444
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeee-cCCceEEeeccCCCCCCChHHHHhcCCCHHHHHHHHHHHH--H
Q 002031 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--A 279 (977)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~--l 279 (977)
+.+.++.+ ..-+.+-.++. ....+|||||++|.+|.+... ....++...+...+.+++ +
T Consensus 100 ~~l~~l~h-----------------~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~-~~~~~~~~~~~~i~~qi~~~L 161 (349)
T 2w4o_A 100 GVLLRLSH-----------------PNIIKLKEIFETPTEISLVLELVTGGELFDRIV-EKGYYSERDAADAVKQILEAV 161 (349)
T ss_dssp HHHHHCCC-----------------TTBCCEEEEEECSSEEEEEECCCCSCBHHHHHT-TCSSCCHHHHHHHHHHHHHHH
T ss_pred HHHHhCCC-----------------CCCcceeeeEecCCeEEEEEEeCCCCCHHHHHH-hcCCCCHHHHHHHHHHHHHHH
Confidence 44444421 01122222232 455689999999999876532 122355565555555554 8
Q ss_pred HHHHhcCccccCCCCCCeEEcc-CCCCceEEEecccccccCH
Q 002031 280 HQIYVDGFFNGDPHPGNFLVSK-DPPHRPILLDFGLTKKLSS 320 (977)
Q Consensus 280 ~~i~~~G~~H~D~hPgNIlv~~-~~~g~i~LiDFG~~~~l~~ 320 (977)
..+|..|++|+|+||.|||++. ++++.++|+|||++..+..
T Consensus 162 ~~LH~~~ivH~Dikp~NIll~~~~~~~~~kl~Dfg~a~~~~~ 203 (349)
T 2w4o_A 162 AYLHENGIVHRDLKPENLLYATPAPDAPLKIADFGLSKIVEH 203 (349)
T ss_dssp HHHHHTTCCCCCCCGGGEEESSSSTTCCEEECCCC-------
T ss_pred HHHHHCCeEecCCCcccEEEecCCCCCCEEEccCccccccCc
Confidence 8899999999999999999975 2248899999999887644
|
| >3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} SCOP: d.144.1.7 PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3u9c_A* 4fbx_A* 3mb7_A* 3mb6_A* ... | Back alignment and structure |
|---|
Probab=99.36 E-value=1.8e-12 Score=144.31 Aligned_cols=136 Identities=15% Similarity=0.236 Sum_probs=94.6
Q ss_pred cccccccccEEEEEEe-cCCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCcHHHH
Q 002031 124 TPLATASIAQVHRATL-VDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (977)
Q Consensus 124 ~piasaSigqV~~A~l-~~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea 202 (977)
+.||.|++|.||+|+. .+|+.||||+.++...+.+ .+|+
T Consensus 42 ~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~----------------------------------------~~E~ 81 (330)
T 3nsz_A 42 RKLGRGKYSEVFEAINITNNEKVVVKILKPVKKKKI----------------------------------------KREI 81 (330)
T ss_dssp EEEEECSSEEEEEEEETTTCCEEEEEEECSCCHHHH----------------------------------------HHHH
T ss_pred EEecccCCeEEEEEEECCCCcEEEEEEecccchHHH----------------------------------------HHHH
Confidence 6899999999999987 5899999999876543332 3344
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeee---cCCceEEeeccCCCCCCChHHHHhcCCCHHHHHHHHHHHH-
Q 002031 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ---SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY- 278 (977)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~---~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~- 278 (977)
+.+.++.+. ...+.+-.++. ....+|||||++|.+|.++.. .++...+...+.+++
T Consensus 82 ~~l~~l~~~----------------~~i~~~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~----~~~~~~~~~~~~qi~~ 141 (330)
T 3nsz_A 82 KILENLRGG----------------PNIITLADIVKDPVSRTPALVFEHVNNTDFKQLYQ----TLTDYDIRFYMYEILK 141 (330)
T ss_dssp HHHHHHTTS----------------TTBCCEEEEEECTTTCCEEEEEECCCCCCHHHHGG----GCCHHHHHHHHHHHHH
T ss_pred HHHHHcCCC----------------CCEEEeeeeeccCCCCceEEEEeccCchhHHHHHH----hCCHHHHHHHHHHHHH
Confidence 444444310 01122222222 234589999999988766532 245555555555544
Q ss_pred -HHHHHhcCccccCCCCCCeEEccCCCCceEEEecccccccCH
Q 002031 279 -AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 320 (977)
Q Consensus 279 -l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 320 (977)
+..+|..|++|+|+||.|||++.+ ...++|+|||++..+..
T Consensus 142 ~l~~lH~~~ivH~Dikp~Nil~~~~-~~~~kl~Dfg~a~~~~~ 183 (330)
T 3nsz_A 142 ALDYCHSMGIMHRDVKPHNVMIDHE-HRKLRLIDWGLAEFYHP 183 (330)
T ss_dssp HHHHHHHTTEECCCCSGGGEEEETT-TTEEEECCCTTCEECCT
T ss_pred HHHHHHhCCeeeCCCCHHHEEEcCC-CCEEEEEeCCCceEcCC
Confidence 888999999999999999999865 23899999999986643
|
| >2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.36 E-value=7.8e-13 Score=147.56 Aligned_cols=147 Identities=19% Similarity=0.227 Sum_probs=98.0
Q ss_pred cccccccccEEEEEEec-CCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCcHHHH
Q 002031 124 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (977)
Q Consensus 124 ~piasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea 202 (977)
+.||+|++|.||+|+.+ +|+.||||+.+.........+ ...-++.+|+
T Consensus 17 ~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~-------------------------------~~~~~~~~E~ 65 (326)
T 2y0a_A 17 EELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRG-------------------------------VSREDIEREV 65 (326)
T ss_dssp EEEECCSSEEEEEEEETTTCCEEEEEEEEBCCSTTCSSS-------------------------------BCHHHHHHHH
T ss_pred eEEeeCCCeEEEEEEECCCCcEEEEEEEEccccccccch-------------------------------hhHHHHHHHH
Confidence 57999999999999985 799999998764322110000 0001244566
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeee-cCCceEEeeccCCCCCCChHHHHhcCCCHHHHHHHHHHHH--H
Q 002031 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--A 279 (977)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~--l 279 (977)
..+.++.+ ..-+.+-.++. ....+|||||++|.+|.++.. ....++...+...+.+++ +
T Consensus 66 ~~l~~l~h-----------------p~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~-~~~~~~~~~~~~i~~qi~~al 127 (326)
T 2y0a_A 66 SILKEIQH-----------------PNVITLHEVYENKTDVILILELVAGGELFDFLA-EKESLTEEEATEFLKQILNGV 127 (326)
T ss_dssp HHHHHCCC-----------------TTBCCEEEEEECSSEEEEEEECCCSCBHHHHHT-TSSCCBHHHHHHHHHHHHHHH
T ss_pred HHHHhCCC-----------------CCCCcEEEEEEeCCEEEEEEEcCCCCCHHHHHH-hcCCcCHHHHHHHHHHHHHHH
Confidence 55555422 01122222232 455789999999999987643 123355666655555554 7
Q ss_pred HHHHhcCccccCCCCCCeEEccCC--CCceEEEecccccccC
Q 002031 280 HQIYVDGFFNGDPHPGNFLVSKDP--PHRPILLDFGLTKKLS 319 (977)
Q Consensus 280 ~~i~~~G~~H~D~hPgNIlv~~~~--~g~i~LiDFG~~~~l~ 319 (977)
..+|..|++|+|+||.|||++.++ ..+++|+|||++..++
T Consensus 128 ~~lH~~~ivH~Dlkp~NIll~~~~~~~~~~kl~Dfg~a~~~~ 169 (326)
T 2y0a_A 128 YYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKID 169 (326)
T ss_dssp HHHHHTTEECCCCCGGGEEESCSSSSSCCEEECCCTTCEECC
T ss_pred HHHHHCCeEcCCCCHHHEEEecCCCCCCCEEEEECCCCeECC
Confidence 889999999999999999998651 1279999999998775
|
| >1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A* | Back alignment and structure |
|---|
Probab=99.36 E-value=1.6e-12 Score=143.35 Aligned_cols=140 Identities=15% Similarity=0.140 Sum_probs=99.0
Q ss_pred cccccccccEEEEEEe------cCCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccC
Q 002031 124 TPLATASIAQVHRATL------VDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELD 197 (977)
Q Consensus 124 ~piasaSigqV~~A~l------~~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld 197 (977)
+.||+|++|.||+|+. .+++.||||+.++.....- . -.
T Consensus 29 ~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~---~---------------------------------~~ 72 (313)
T 1t46_A 29 KTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTE---R---------------------------------EA 72 (313)
T ss_dssp EEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHH---H---------------------------------HH
T ss_pred HhhCccCCcceEEEEEeeccccchhhhhHHHhcCcchhHHH---H---------------------------------HH
Confidence 6899999999999985 2578999999876432110 0 02
Q ss_pred cHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceee---e-cCCceEEeeccCCCCCCChHHHHhc----------
Q 002031 198 FNSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVI---Q-SSETVLILEFMDGIRLNDCESLEAF---------- 263 (977)
Q Consensus 198 ~~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~---~-~~~~vLVmE~i~G~~L~~~~~~~~~---------- 263 (977)
+.+|++.+.++.+ + ..|++++ . ....++||||++|.+|.++......
T Consensus 73 ~~~E~~~l~~l~~-----------------h--~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~ 133 (313)
T 1t46_A 73 LMSELKVLSYLGN-----------------H--MNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPA 133 (313)
T ss_dssp HHHHHHHHHHHCC-----------------C--TTBCCEEEEECSSSSCEEEEECCTTEEHHHHHHHTTTTC--------
T ss_pred HHHHHHHHhhccc-----------------C--CCeeeEEEEEecCCCcEEEEecCCCCCHHHHHHhccccccccccccc
Confidence 4456666665521 1 1233333 2 4567999999999999887542211
Q ss_pred -------CCCHHHHHHHHHHHH--HHHHHhcCccccCCCCCCeEEccCCCCceEEEecccccccCH
Q 002031 264 -------GVNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 320 (977)
Q Consensus 264 -------~~~~~~l~~~l~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 320 (977)
.++...+...+.+++ +..+|..|++|+|+||.||+++.+ +.++|+|||++..+..
T Consensus 134 ~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~~--~~~kl~Dfg~~~~~~~ 197 (313)
T 1t46_A 134 IMEDDELALDLEDLLSFSYQVAKGMAFLASKNCIHRDLAARNILLTHG--RITKICDFGLARDIKN 197 (313)
T ss_dssp ------CCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEETT--TEEEECCCGGGSCTTS
T ss_pred ccccccccCCHHHHHHHHHHHHHHHHHHHHCCeecCCCccceEEEcCC--CCEEEccccccccccc
Confidence 255666666555554 888999999999999999999865 8999999999887653
|
| >3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.36 E-value=5e-13 Score=151.73 Aligned_cols=142 Identities=19% Similarity=0.145 Sum_probs=95.1
Q ss_pred cccccccccEEEEEEec------CCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccC
Q 002031 124 TPLATASIAQVHRATLV------DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELD 197 (977)
Q Consensus 124 ~piasaSigqV~~A~l~------~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld 197 (977)
+.||.|++|.||+|+.. +++.||||+.+......- +.+
T Consensus 77 ~~LG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~------------------------------------~~~ 120 (367)
T 3l9p_A 77 RGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQD------------------------------------ELD 120 (367)
T ss_dssp EECCCCSSSCEEEEEECC-----CCEEEEEEECCSSCCHHH------------------------------------HHH
T ss_pred eEeeeCCCEEEEEEEEccCCCCCcceeEEEEecccccChhh------------------------------------HHH
Confidence 67999999999999953 577899998764322111 112
Q ss_pred cHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeee-cCCceEEeeccCCCCCCChHHHHh------cCCCHHHH
Q 002031 198 FNSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLEA------FGVNKQKV 270 (977)
Q Consensus 198 ~~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLVmE~i~G~~L~~~~~~~~------~~~~~~~l 270 (977)
+.+|+..+.++.+ ..-+.+-.++. ....+|||||++|.+|.++..... ..+....+
T Consensus 121 ~~~E~~~l~~l~h-----------------pnIv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~ 183 (367)
T 3l9p_A 121 FLMEALIISKFNH-----------------QNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDL 183 (367)
T ss_dssp HHHHHHHHHHCCC-----------------TTBCCEEEEECSSSSCEEEEECCTTEEHHHHHHHHSCCSSSCCCCCHHHH
T ss_pred HHHHHHHHHhCCC-----------------CCCCeEEEEEecCCCCEEEEEeCCCCCHHHHHHhhccccCccccccHHHH
Confidence 4456655554421 01122222222 456799999999999988754322 12555555
Q ss_pred HHHHHHHH--HHHHHhcCccccCCCCCCeEEccCC-CCceEEEeccccccc
Q 002031 271 VEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDP-PHRPILLDFGLTKKL 318 (977)
Q Consensus 271 ~~~l~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~-~g~i~LiDFG~~~~l 318 (977)
...+.+++ +..+|..|++|||+||.|||++.++ +..++|+|||+++.+
T Consensus 184 ~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~~~~kL~DFG~a~~~ 234 (367)
T 3l9p_A 184 LHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDI 234 (367)
T ss_dssp HHHHHHHHHHHHHHHHTTCCCSCCCGGGEEESCSSTTCCEEECCCHHHHHH
T ss_pred HHHHHHHHHHHHHHHhCCeeCCCCChhhEEEecCCCCceEEECCCcccccc
Confidence 55555544 8889999999999999999998542 235999999998644
|
| >4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A* | Back alignment and structure |
|---|
Probab=99.36 E-value=6.7e-13 Score=144.66 Aligned_cols=145 Identities=16% Similarity=0.135 Sum_probs=96.9
Q ss_pred ccccccccccEEEEEEe-cCCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCcHHH
Q 002031 123 ETPLATASIAQVHRATL-VDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSE 201 (977)
Q Consensus 123 ~~piasaSigqV~~A~l-~~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~E 201 (977)
.+.||.|++|.||+|+. .+|+.||||+.+......-..... .--.+.+|
T Consensus 24 ~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~------------------------------~~~~~~~E 73 (287)
T 4f0f_A 24 EKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIE------------------------------KFQEFQRE 73 (287)
T ss_dssp EEECCCCSSSCEEEEEETTTCCEEEEEECCCCTTTCCHHHHC------------------------------CSHHHHHH
T ss_pred hhccccCCceeEEEEEEcCCceEEEEEEeeccccccchhHHH------------------------------HHHHHHHH
Confidence 36799999999999998 489999999986543211110000 00123445
Q ss_pred HHHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeee--cCCceEEeeccCCCCCCChHHHHhcCCCHHHHHHHHHHHH-
Q 002031 202 AENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ--SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY- 278 (977)
Q Consensus 202 a~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~--~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~- 278 (977)
+..+.++.+ ..|.+++. ....++||||++|.+|.+........++...+...+.+++
T Consensus 74 ~~~l~~l~h--------------------~~i~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~l~~ 133 (287)
T 4f0f_A 74 VFIMSNLNH--------------------PNIVKLYGLMHNPPRMVMEFVPCGDLYHRLLDKAHPIKWSVKLRLMLDIAL 133 (287)
T ss_dssp HHHHTTCCC--------------------TTBCCEEEEETTTTEEEEECCTTCBHHHHHHCTTSCCCHHHHHHHHHHHHH
T ss_pred HHHHHhCCC--------------------CCchhhheeecCCCeEEEEecCCCCHHHHHhcccCCccHHHHHHHHHHHHH
Confidence 554443321 12334443 4556899999999888665332333456666666555554
Q ss_pred -HHHHHhcC--ccccCCCCCCeEEccCCCCc-----eEEEecccccccC
Q 002031 279 -AHQIYVDG--FFNGDPHPGNFLVSKDPPHR-----PILLDFGLTKKLS 319 (977)
Q Consensus 279 -l~~i~~~G--~~H~D~hPgNIlv~~~~~g~-----i~LiDFG~~~~l~ 319 (977)
+..+|..| ++|+|+||.||+++.+ +. ++|+|||++....
T Consensus 134 ~l~~lH~~~~~ivH~dikp~Nil~~~~--~~~~~~~~kl~Dfg~~~~~~ 180 (287)
T 4f0f_A 134 GIEYMQNQNPPIVHRDLRSPNIFLQSL--DENAPVCAKVADFGLSQQSV 180 (287)
T ss_dssp HHHHHHTSSSCCBCSCCSGGGEEESCC--CTTCSCCEEECCCTTCBCCS
T ss_pred HHHHHHhCCCCeecCCCCcceEEEecc--CCCCceeEEeCCCCcccccc
Confidence 88899999 9999999999999865 44 9999999987554
|
| >2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B* | Back alignment and structure |
|---|
Probab=99.36 E-value=1.2e-12 Score=142.08 Aligned_cols=77 Identities=21% Similarity=0.262 Sum_probs=60.8
Q ss_pred ceEEeeccCCCCCCChHHHHh-cCCCHHHHHHHHHHHH--HHHHHhcCccccCCCCCCeEEccCCCCceEEEeccccccc
Q 002031 242 TVLILEFMDGIRLNDCESLEA-FGVNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKL 318 (977)
Q Consensus 242 ~vLVmE~i~G~~L~~~~~~~~-~~~~~~~l~~~l~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l 318 (977)
.++||||++|.+|.++..... ..++...+...+.+++ +..+|..|++|+|+||.||+++.+ ++++|+|||++..+
T Consensus 95 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~~--~~~kl~Dfg~~~~~ 172 (284)
T 2a19_B 95 LFIQMEFCDKGTLEQWIEKRRGEKLDKVLALELFEQITKGVDYIHSKKLINRDLKPSNIFLVDT--KQVKIGDFGLVTSL 172 (284)
T ss_dssp EEEEECCCCSCBHHHHHHHGGGSCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEEET--TEEEECCCTTCEES
T ss_pred EEEEEeccCCCCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCHHHEEEcCC--CCEEECcchhheec
Confidence 589999999999988754322 3456655555555544 788999999999999999999965 89999999998876
Q ss_pred CH
Q 002031 319 SS 320 (977)
Q Consensus 319 ~~ 320 (977)
..
T Consensus 173 ~~ 174 (284)
T 2a19_B 173 KN 174 (284)
T ss_dssp SC
T ss_pred cc
Confidence 43
|
| >2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A | Back alignment and structure |
|---|
Probab=99.36 E-value=1.5e-12 Score=146.32 Aligned_cols=138 Identities=17% Similarity=0.186 Sum_probs=93.8
Q ss_pred cccccccccEEEEEEec-CCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCcHHHH
Q 002031 124 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (977)
Q Consensus 124 ~piasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea 202 (977)
+.||.|++|.||+|+.+ +|+.||||+...... +..+|.
T Consensus 28 ~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~-----------------------------------------~~~~E~ 66 (342)
T 2qr7_A 28 EDIGVGSYSVCKRCIHKATNMEFAVKIIDKSKR-----------------------------------------DPTEEI 66 (342)
T ss_dssp EEEEECSSEEEEEEEETTTTEEEEEEEEETTTC-----------------------------------------CCHHHH
T ss_pred EEEeeCCCEEEEEEEECCCCCEEEEEEEEcccC-----------------------------------------ChHHHH
Confidence 57999999999999985 799999998754321 233444
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeee-cCCceEEeeccCCCCCCChHHHHhcCCCHHHHHHHHHHHH--H
Q 002031 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--A 279 (977)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~--l 279 (977)
+.+.++.+. ..-+.+-.++. ....+|||||++|.+|.+... ....++...+...+.+++ +
T Consensus 67 ~~l~~~~~h----------------p~iv~~~~~~~~~~~~~lv~E~~~gg~L~~~i~-~~~~~~~~~~~~~~~qi~~al 129 (342)
T 2qr7_A 67 EILLRYGQH----------------PNIITLKDVYDDGKYVYVVTELMKGGELLDKIL-RQKFFSEREASAVLFTITKTV 129 (342)
T ss_dssp HHHHHHTTS----------------TTBCCEEEEEECSSEEEEEECCCCSCBHHHHHH-TCTTCCHHHHHHHHHHHHHHH
T ss_pred HHHHHhcCC----------------CCcCeEEEEEEcCCEEEEEEeCCCCCcHHHHHH-HcCCCCHHHHHHHHHHHHHHH
Confidence 444443210 11122222333 345689999999998876532 223356666555555544 8
Q ss_pred HHHHhcCccccCCCCCCeEEccCCC--CceEEEecccccccC
Q 002031 280 HQIYVDGFFNGDPHPGNFLVSKDPP--HRPILLDFGLTKKLS 319 (977)
Q Consensus 280 ~~i~~~G~~H~D~hPgNIlv~~~~~--g~i~LiDFG~~~~l~ 319 (977)
..+|..|++|||+||+|||+..+.+ +.++|+|||++..+.
T Consensus 130 ~~lH~~givHrDlkp~NIl~~~~~~~~~~~kl~Dfg~a~~~~ 171 (342)
T 2qr7_A 130 EYLHAQGVVHRDLKPSNILYVDESGNPESIRICDFGFAKQLR 171 (342)
T ss_dssp HHHHHTTEECSCCCGGGEEESSSSCSGGGEEECCCTTCEECB
T ss_pred HHHHHCCcEeccCCHHHEEEecCCCCcCeEEEEECCCcccCc
Confidence 8899999999999999999864311 359999999988664
|
| >3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe} | Back alignment and structure |
|---|
Probab=99.35 E-value=8.8e-13 Score=147.93 Aligned_cols=142 Identities=16% Similarity=0.215 Sum_probs=93.4
Q ss_pred ccccccccccEEEEEEe-cCCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCcHHH
Q 002031 123 ETPLATASIAQVHRATL-VDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSE 201 (977)
Q Consensus 123 ~~piasaSigqV~~A~l-~~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~E 201 (977)
.+.||+|++|.||+|+. .+|+.||||+........- .....+.+|
T Consensus 14 ~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~----------------------------------~~~~~~~~E 59 (336)
T 3h4j_B 14 RETLGEGSFGKVKLATHYKTQQKVALKFISRQLLKKS----------------------------------DMHMRVERE 59 (336)
T ss_dssp EEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHT----------------------------------TCSHHHHHH
T ss_pred EEEEecCCCeEEEEEEECCCCCEEEEEEEehHHccch----------------------------------hHHHHHHHH
Confidence 36899999999999997 5899999998753211000 001123445
Q ss_pred HHHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeee-cCCceEEeeccCCCCCCChHHHHhcCCCHHHHHHHHHHHH--
Q 002031 202 AENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY-- 278 (977)
Q Consensus 202 a~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~-- 278 (977)
++.+..+++ ..-+.+-.++. ....+|||||++ .+|.+... ....++...+...+.+++
T Consensus 60 ~~~l~~l~h-----------------pnIv~l~~~~~~~~~~~lv~E~~~-g~l~~~l~-~~~~l~~~~~~~i~~qi~~a 120 (336)
T 3h4j_B 60 ISYLKLLRH-----------------PHIIKLYDVITTPTDIVMVIEYAG-GELFDYIV-EKKRMTEDEGRRFFQQIICA 120 (336)
T ss_dssp HHHHTTCCC-----------------TTBCCEEEEEECSSEEEEEECCCC-EEHHHHHH-HHCSCCHHHHHHHHHHHHHH
T ss_pred HHHHHhCCC-----------------CCCCeEEEEEEeCCEEEEEEECCC-CcHHHHHH-HcCCCCHHHHHHHHHHHHHH
Confidence 554443321 11122222222 455689999995 45544432 234566666555555544
Q ss_pred HHHHHhcCccccCCCCCCeEEccCCCCceEEEecccccccC
Q 002031 279 AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 319 (977)
Q Consensus 279 l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~ 319 (977)
+..+|..|++|||+||+|||++.+ +.++|+|||++..+.
T Consensus 121 L~~LH~~givH~Dlkp~NIll~~~--~~~kl~DFG~s~~~~ 159 (336)
T 3h4j_B 121 IEYCHRHKIVHRDLKPENLLLDDN--LNVKIADFGLSNIMT 159 (336)
T ss_dssp HHHHHHHTCCCCCCSTTTEEECTT--CCEEECCSSCTBTTT
T ss_pred HHHHHHCCeEecCCchhhEEEcCC--CCEEEEEeccceecc
Confidence 888999999999999999999865 899999999987654
|
| >2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus} | Back alignment and structure |
|---|
Probab=99.35 E-value=4.9e-13 Score=156.98 Aligned_cols=144 Identities=17% Similarity=0.270 Sum_probs=97.2
Q ss_pred ccccccccccEEEEEEec-CCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCcHHH
Q 002031 123 ETPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSE 201 (977)
Q Consensus 123 ~~piasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~E 201 (977)
.+.||+|++|+||+|+.+ +|+.||||+.++...... + .. -.+.+|
T Consensus 21 ~~~LG~G~fg~V~~a~~~~~g~~vAvK~i~~~~~~~~--~----------------------~~----------~~~~~E 66 (476)
T 2y94_A 21 GDTLGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSL--D----------------------VV----------GKIRRE 66 (476)
T ss_dssp EEEEECCSSSCEEEEEETTTCCEEEEEEEEHHHHHHT--T----------------------TH----------HHHHHH
T ss_pred EEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCH--H----------------------HH----------HHHHHH
Confidence 468999999999999985 899999999764211000 0 00 023345
Q ss_pred HHHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeee-cCCceEEeeccCCCCCCChHHHHhcCCCHHHHHHHHHHHH--
Q 002031 202 AENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY-- 278 (977)
Q Consensus 202 a~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~-- 278 (977)
+..+..+.+ ..-+.+-.++. ....+|||||++|.+|.++.. ....++...+...+.+++
T Consensus 67 i~~l~~l~H-----------------pnIv~l~~~~~~~~~~~lv~E~~~gg~L~~~l~-~~~~l~~~~~~~i~~qi~~a 128 (476)
T 2y94_A 67 IQNLKLFRH-----------------PHIIKLYQVISTPSDIFMVMEYVSGGELFDYIC-KNGRLDEKESRRLFQQILSG 128 (476)
T ss_dssp HHHHTTCCC-----------------TTBCCEEEEEECSSEEEEEEECCSSEEHHHHTT-SSSSCCHHHHHHHHHHHHHH
T ss_pred HHHHHhCCC-----------------CCCCcEEEEEEECCEEEEEEeCCCCCcHHHHHH-hcCCCCHHHHHHHHHHHHHH
Confidence 554433321 11122222332 456789999999999877643 122355555555555544
Q ss_pred HHHHHhcCccccCCCCCCeEEccCCCCceEEEecccccccCH
Q 002031 279 AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 320 (977)
Q Consensus 279 l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 320 (977)
+..+|..|++|||+||+|||++.+ +.++|+|||++..+..
T Consensus 129 L~~LH~~givHrDLkp~NIll~~~--~~vkL~DFG~a~~~~~ 168 (476)
T 2y94_A 129 VDYCHRHMVVHRDLKPENVLLDAH--MNAKIADFGLSNMMSD 168 (476)
T ss_dssp HHHHHTTTEECSCCSGGGEEECTT--CCEEECCCSSCEECCT
T ss_pred HHHHHHCCCCcccccHHHEEEecC--CCeEEEeccchhhccc
Confidence 788999999999999999999865 8999999999987654
|
| >3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* 4e20_A* 4e1z_A* | Back alignment and structure |
|---|
Probab=99.35 E-value=1.4e-12 Score=144.86 Aligned_cols=140 Identities=16% Similarity=0.164 Sum_probs=97.7
Q ss_pred cccccccccEEEEEEec-----CCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCc
Q 002031 124 TPLATASIAQVHRATLV-----DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDF 198 (977)
Q Consensus 124 ~piasaSigqV~~A~l~-----~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~ 198 (977)
+.||+|++|.||+++.+ +|+.||||+.+........ -.+
T Consensus 37 ~~lG~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~------------------------------------~~~ 80 (318)
T 3lxp_A 37 RDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADAGPQHR------------------------------------SGW 80 (318)
T ss_dssp EEEEECSSEEEEEEEECSCC--CCEEEEEEEECTTCCHHHH------------------------------------HHH
T ss_pred heecCCCCeEEEEEEEccCCCCCCcEEEEEEeccccChHHH------------------------------------HHH
Confidence 68999999999888642 7899999998754321100 023
Q ss_pred HHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeeec---CCceEEeeccCCCCCCChHHHHhcCCCHHHHHHHHH
Q 002031 199 NSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQS---SETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEIT 275 (977)
Q Consensus 199 ~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~~---~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~ 275 (977)
.+|++.+.++.+ ..-+.+-.++.. ...+|||||++|.+|.++. ...+++...+...+.
T Consensus 81 ~~E~~~l~~l~h-----------------~~iv~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l--~~~~~~~~~~~~i~~ 141 (318)
T 3lxp_A 81 KQEIDILRTLYH-----------------EHIIKYKGCCEDAGAASLQLVMEYVPLGSLRDYL--PRHSIGLAQLLLFAQ 141 (318)
T ss_dssp HHHHHHHHHCCC-----------------TTBCCEEEEEEETTTTEEEEEECCCTTCBHHHHG--GGSCCCHHHHHHHHH
T ss_pred HHHHHHHHhCCC-----------------cchhhEEEEEecCCCceEEEEEecccCCcHHHHH--hhCCCCHHHHHHHHH
Confidence 445555555421 011222222221 3347999999999998764 344567766666666
Q ss_pred HHH--HHHHHhcCccccCCCCCCeEEccCCCCceEEEecccccccCH
Q 002031 276 RAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 320 (977)
Q Consensus 276 ~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 320 (977)
+++ +..+|..|++|+|+||.||+++.+ +.++|+|||++..+..
T Consensus 142 ~l~~~l~~LH~~~ivH~Dikp~Nil~~~~--~~~kl~Dfg~a~~~~~ 186 (318)
T 3lxp_A 142 QICEGMAYLHAQHYIHRDLAARNVLLDND--RLVKIGDFGLAKAVPE 186 (318)
T ss_dssp HHHHHHHHHHHTTEECSCCSGGGEEECTT--CCEEECCGGGCEECCT
T ss_pred HHHHHHHHHHhCCccCCCCchheEEEcCC--CCEEECCccccccccc
Confidence 655 889999999999999999999865 8999999999987654
|
| >3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A | Back alignment and structure |
|---|
Probab=99.35 E-value=3e-12 Score=156.87 Aligned_cols=138 Identities=13% Similarity=0.106 Sum_probs=92.5
Q ss_pred cccccccccEEEEEEec-CCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCcHHHH
Q 002031 124 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (977)
Q Consensus 124 ~piasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea 202 (977)
+.||.|++|+||+|+.+ +|+.||||+.+...... +- ..-.+..|.
T Consensus 347 ~~LG~G~fG~V~~~~~~~~~~~vAvK~l~~~~~~~---~~-------------------------------~~~~~~~E~ 392 (674)
T 3pfq_A 347 MVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQ---DD-------------------------------DVECTMVEK 392 (674)
T ss_dssp EESSBTTTBCEEEEEESSSCCEEEEEEEEHHHHHH---TT-------------------------------TTHHHHHHH
T ss_pred EEEccCCCEEEEEEEECCCCcEEEEEEEecccccc---HH-------------------------------HHHHHHHHH
Confidence 67999999999999975 78999999976421100 00 000112232
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeee----cCCceEEeeccCCCCCCChHHHHhcCCCHHHHHHHHHHHH
Q 002031 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ----SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY 278 (977)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~----~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~ 278 (977)
+.+..+. .++ .|..++. ....+|||||++|.+|.+.... ...++...+...+.+++
T Consensus 393 ~~l~~~~-----------------~~~--~i~~l~~~~~~~~~~~lV~E~~~gg~L~~~l~~-~~~~~~~~~~~~~~qi~ 452 (674)
T 3pfq_A 393 RVLALPG-----------------KPP--FLTQLHSCFQTMDRLYFVMEYVNGGDLMYHIQQ-VGRFKEPHAVFYAAEIA 452 (674)
T ss_dssp HHHTCTT-----------------CCT--TBCCEEEECBCSSEEEEEEECCCSCBHHHHHHH-HSSCCHHHHHHHHHHHH
T ss_pred HHHHhcc-----------------CCC--eEEEEEEEEEeCCEEEEEEeCcCCCcHHHHHHh-cCCCCHHHHHHHHHHHH
Confidence 2222111 111 2233332 3456899999999999776432 23466666655555554
Q ss_pred --HHHHHhcCccccCCCCCCeEEccCCCCceEEEecccccc
Q 002031 279 --AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKK 317 (977)
Q Consensus 279 --l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~ 317 (977)
+..+|..||+||||||+|||++.+ +.++|+|||+++.
T Consensus 453 ~aL~~LH~~gIiHrDLKp~NILl~~~--g~ikL~DFGla~~ 491 (674)
T 3pfq_A 453 IGLFFLQSKGIIYRDLKLDNVMLDSE--GHIKIADFGMCKE 491 (674)
T ss_dssp HHHHHHHHTSEECCCCCSTTEEECSS--SCEEECCCTTCEE
T ss_pred HHHHHHHhCCeEeccCChhhEEEcCC--CcEEEeecceeec
Confidence 889999999999999999999865 8999999999875
|
| >3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase; structural genomics consortium, SGC, transferase; 2.37A {Cryptosporidium parvum iowa II} | Back alignment and structure |
|---|
Probab=99.35 E-value=1.3e-12 Score=149.36 Aligned_cols=140 Identities=18% Similarity=0.235 Sum_probs=84.0
Q ss_pred cccccccccEEEEEEe-cCCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCcHHHH
Q 002031 124 TPLATASIAQVHRATL-VDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (977)
Q Consensus 124 ~piasaSigqV~~A~l-~~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea 202 (977)
+.||+|++|.||+|+. .+|+.||||+.+....... +.. .+.+|.
T Consensus 15 ~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~~~~~--~~~---------------------------------~~~~E~ 59 (388)
T 3oz6_A 15 KKLGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQNST--DAQ---------------------------------RTFREI 59 (388)
T ss_dssp EC-------CEEEEEETTTCCEEEEEEECC--CCHH--HHH---------------------------------HHHHHH
T ss_pred EEeeeCCCeEEEEEEECCCCCEEEEEEecccccChH--HHH---------------------------------HHHHHH
Confidence 6799999999999997 4899999998754322110 000 122344
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeee-c--CCceEEeeccCCCCCCChHHHHhcCCCHHHHHHHHHHHH-
Q 002031 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-S--SETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY- 278 (977)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~--~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~- 278 (977)
..+.++.. ...-+.+-.++. . ...+|||||++| +|.++ +....++...+...+.+++
T Consensus 60 ~~l~~l~~----------------h~niv~l~~~~~~~~~~~~~lv~e~~~~-~L~~~--~~~~~~~~~~~~~i~~qi~~ 120 (388)
T 3oz6_A 60 MILTELSG----------------HENIVNLLNVLRADNDRDVYLVFDYMET-DLHAV--IRANILEPVHKQYVVYQLIK 120 (388)
T ss_dssp HHHHHTTT----------------CTTBCCEEEEEECTTSSCEEEEEECCSE-EHHHH--HHHTCCCHHHHHHHHHHHHH
T ss_pred HHHHhccC----------------CCCCCeeeeEEecCCCCEEEEEecccCc-CHHHH--HHcCCCCHHHHHHHHHHHHH
Confidence 44444321 011122223332 1 235899999986 55444 3334455555444444443
Q ss_pred -HHHHHhcCccccCCCCCCeEEccCCCCceEEEecccccccC
Q 002031 279 -AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 319 (977)
Q Consensus 279 -l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~ 319 (977)
+..+|..|++|||+||+|||++.+ +.++|+|||+++.+.
T Consensus 121 ~L~~LH~~~ivHrDlkp~NIll~~~--~~~kl~DFG~a~~~~ 160 (388)
T 3oz6_A 121 VIKYLHSGGLLHRDMKPSNILLNAE--CHVKVADFGLSRSFV 160 (388)
T ss_dssp HHHHHHHTTEECCCCCGGGEEECTT--CCEEECCCTTCEESS
T ss_pred HHHHHHhCCEEeCCCCHHHeEEcCC--CCEEecCCccccccc
Confidence 889999999999999999999865 899999999998764
|
| >4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.35 E-value=7.8e-13 Score=151.06 Aligned_cols=143 Identities=12% Similarity=0.102 Sum_probs=95.9
Q ss_pred cccccccccEEEEEEec-CCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCcHHHH
Q 002031 124 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (977)
Q Consensus 124 ~piasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea 202 (977)
+.||.|++|.||+|+.+ +|+.||||+.+...... .+ ..-.+.+|+
T Consensus 21 ~~LG~G~fG~V~~~~~~~~~~~~AiK~~~~~~~~~--~~--------------------------------~~~~~~~E~ 66 (384)
T 4fr4_A 21 RAIGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVE--RN--------------------------------EVRNVFKEL 66 (384)
T ss_dssp EEEECCTTCCEEEEEETTTCCEEEEEEEEHHHHHH--TT--------------------------------CHHHHHHHH
T ss_pred EEEeeCCCeEEEEEEECCCCCEEEEEEEehhhccc--HH--------------------------------HHHHHHHHH
Confidence 68999999999999975 78999999875321000 00 000233455
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeee-cCCceEEeeccCCCCCCChHHHHhcCCCHHHHHHHHHHHH--H
Q 002031 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--A 279 (977)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~--l 279 (977)
+.+..+.+ ..-+.+-..+. ....++||||++|.+|.+... ....++...+...+.+++ +
T Consensus 67 ~il~~l~h-----------------p~Iv~l~~~~~~~~~~~lv~e~~~gg~L~~~l~-~~~~l~~~~~~~~~~qi~~aL 128 (384)
T 4fr4_A 67 QIMQGLEH-----------------PFLVNLWYSFQDEEDMFMVVDLLLGGDLRYHLQ-QNVHFKEETVKLFICELVMAL 128 (384)
T ss_dssp HHHHTCCC-----------------TTBCCEEEEEECSSEEEEEECCCTTEEHHHHHH-TTCCCCHHHHHHHHHHHHHHH
T ss_pred HHHHhCCC-----------------CCCCcEEEEEEeCCEEEEEEecCCCCcHHHHHH-hcCCCCHHHHHHHHHHHHHHH
Confidence 54443321 01111112222 455689999999999876643 223456655555555544 8
Q ss_pred HHHHhcCccccCCCCCCeEEccCCCCceEEEecccccccCH
Q 002031 280 HQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 320 (977)
Q Consensus 280 ~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 320 (977)
..+|..|++|||+||+|||++.+ |.++|+|||++..+..
T Consensus 129 ~~LH~~givHrDlkp~NIll~~~--g~vkL~DFG~a~~~~~ 167 (384)
T 4fr4_A 129 DYLQNQRIIHRDMKPDNILLDEH--GHVHITDFNIAAMLPR 167 (384)
T ss_dssp HHHHHTTEECCCCSGGGEEECTT--SCEEECCCTTCEECCT
T ss_pred HHHHHCCceeccCcHHHeEECCC--CCEEEeccceeeeccC
Confidence 88999999999999999999865 8999999999987653
|
| >2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A | Back alignment and structure |
|---|
Probab=99.35 E-value=1.2e-12 Score=144.62 Aligned_cols=143 Identities=17% Similarity=0.143 Sum_probs=93.2
Q ss_pred ccccccccccEEEEEEe-cCCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCcHHH
Q 002031 123 ETPLATASIAQVHRATL-VDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSE 201 (977)
Q Consensus 123 ~~piasaSigqV~~A~l-~~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~E 201 (977)
.+.||.|++|.||+|+. .+|+.||||+.+...... .-.+.+|
T Consensus 18 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~-------------------------------------~~~~~~E 60 (316)
T 2ac3_A 18 EDVLGEGAHARVQTCINLITSQEYAVKIIEKQPGHI-------------------------------------RSRVFRE 60 (316)
T ss_dssp CCCCCCCSSEEEEEEECSSSCCEEEEEEEECCSSCC-------------------------------------HHHHHHH
T ss_pred CceecCCceEEEEEEEEcCCCcEEEEEEEeeCcchh-------------------------------------HHHHHHH
Confidence 46799999999999996 489999999975432110 0012334
Q ss_pred HHHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeee-cCCceEEeeccCCCCCCChHHHHhcCCCHHHHHHHHHHHH--
Q 002031 202 AENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY-- 278 (977)
Q Consensus 202 a~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~-- 278 (977)
++.+.++. .+ ..-+.+-.++. ....+|||||++|.+|.+.... ...++...+...+.+++
T Consensus 61 ~~~l~~~~---~h-------------~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~-~~~~~~~~~~~i~~qi~~~ 123 (316)
T 2ac3_A 61 VEMLYQCQ---GH-------------RNVLELIEFFEEEDRFYLVFEKMRGGSILSHIHK-RRHFNELEASVVVQDVASA 123 (316)
T ss_dssp HHHHHHTC---CC-------------TTBCCEEEEEEETTEEEEEEECCTTCBHHHHHHH-HSSCCHHHHHHHHHHHHHH
T ss_pred HHHHHHhc---CC-------------CCeeeEEEEEeeCCEEEEEEEcCCCCcHHHHHhc-cCCCCHHHHHHHHHHHHHH
Confidence 44443321 10 01112222222 4566899999999998877532 23456655555555544
Q ss_pred HHHHHhcCccccCCCCCCeEEccCCC-CceEEEecccccccC
Q 002031 279 AHQIYVDGFFNGDPHPGNFLVSKDPP-HRPILLDFGLTKKLS 319 (977)
Q Consensus 279 l~~i~~~G~~H~D~hPgNIlv~~~~~-g~i~LiDFG~~~~l~ 319 (977)
+..+|..|++|+|+||.||+++.++. ..++|+|||++..+.
T Consensus 124 l~~lH~~~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~~~~~~ 165 (316)
T 2ac3_A 124 LDFLHNKGIAHRDLKPENILCEHPNQVSPVKICDFDLGSGIK 165 (316)
T ss_dssp HHHHHHTTCCCCCCCGGGEEESCSSSSCSEEECCTTCCC---
T ss_pred HHHHHhCCceeCCCCHHHEEEccCCCcCceEEEEccCccccc
Confidence 88899999999999999999986521 239999999988664
|
| >2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.35 E-value=5.8e-13 Score=161.49 Aligned_cols=142 Identities=20% Similarity=0.225 Sum_probs=98.3
Q ss_pred ccccccccEEEEEEec---CCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCcHHH
Q 002031 125 PLATASIAQVHRATLV---DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSE 201 (977)
Q Consensus 125 piasaSigqV~~A~l~---~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~E 201 (977)
.||+|++|.||+|+.+ ++..||||+.+.+...... -+|.+|
T Consensus 343 ~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~------------------------------------~~~~~E 386 (613)
T 2ozo_A 343 ELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADT------------------------------------EEMMRE 386 (613)
T ss_dssp EEEECSSSEEEEEEEECSSCEEEEEEEECCCCCSSTTH------------------------------------HHHHHH
T ss_pred EEecCCCcEEEEEEEecCCCcEEEEEEEcCCCCChHHH------------------------------------HHHHHH
Confidence 6999999999999874 5678999998765321110 024455
Q ss_pred HHHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeeecCCceEEeeccCCCCCCChHHHHhcCCCHHHHHHHHHHHH--H
Q 002031 202 AENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQSSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--A 279 (977)
Q Consensus 202 a~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~--l 279 (977)
++.+.++++ ..-+.+-.++.....+|||||++|.+|.++.......++...+...+.+++ +
T Consensus 387 ~~il~~l~h-----------------pniv~l~~~~~~~~~~lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~~L 449 (613)
T 2ozo_A 387 AQIMHQLDN-----------------PYIVRLIGVCQAEALMLVMEMAGGGPLHKFLVGKREEIPVSNVAELLHQVSMGM 449 (613)
T ss_dssp HHHHTTCCC-----------------TTBCCEEEEEESSSEEEEEECCTTCBHHHHHTTCTTTSCHHHHHHHHHHHHHHH
T ss_pred HHHHHhCCC-----------------CCEeeEEEEeccCCeEEEEEeCCCCcHHHHHhhccCCCCHHHHHHHHHHHHHHH
Confidence 555544321 111222222234557899999999999876432233456666666666655 8
Q ss_pred HHHHhcCccccCCCCCCeEEccCCCCceEEEecccccccCHH
Q 002031 280 HQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSSS 321 (977)
Q Consensus 280 ~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~~ 321 (977)
..+|..|++|||+||.|||++.+ +.++|+|||+++.+...
T Consensus 450 ~~LH~~~iiHrDlkp~NILl~~~--~~vkL~DFGla~~~~~~ 489 (613)
T 2ozo_A 450 KYLEEKNFVHRNLAARNVLLVNR--HYAKISDFGLSKALGAD 489 (613)
T ss_dssp HHHHHTTCCCSCCSGGGEEEEET--TEEEECCCSTTTTCC--
T ss_pred HHHHHCCEEcCcCCHHHEEEcCC--CcEEEeeccCcccccCC
Confidence 88999999999999999999966 89999999999887643
|
| >2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ... | Back alignment and structure |
|---|
Probab=99.35 E-value=2.1e-12 Score=144.25 Aligned_cols=140 Identities=20% Similarity=0.255 Sum_probs=95.5
Q ss_pred ccccccccccEEEEEEec--------CCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhccc
Q 002031 123 ETPLATASIAQVHRATLV--------DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPK 194 (977)
Q Consensus 123 ~~piasaSigqV~~A~l~--------~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ 194 (977)
.+.||.|++|+||+|+.. +++.||||+.+...... +..
T Consensus 40 ~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~vavK~~~~~~~~~---~~~------------------------------- 85 (334)
T 2pvf_A 40 GKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEK---DLS------------------------------- 85 (334)
T ss_dssp EEEEEECSSCEEEEEEETTCSTTCC---CEEEEEECCTTCCHH---HHH-------------------------------
T ss_pred eeEEeecCceeEEEeEeccccccccccceEEEEeeeccCCcHH---HHH-------------------------------
Confidence 378999999999999863 57899999987543211 000
Q ss_pred ccCcHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeee----cCCceEEeeccCCCCCCChHHHHh--------
Q 002031 195 ELDFNSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ----SSETVLILEFMDGIRLNDCESLEA-------- 262 (977)
Q Consensus 195 Eld~~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~----~~~~vLVmE~i~G~~L~~~~~~~~-------- 262 (977)
++.+|++.+.++.+ ++ .|++++. ....++||||++|.+|.++.....
T Consensus 86 --~~~~E~~~l~~l~~-----------------hp--~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~ 144 (334)
T 2pvf_A 86 --DLVSEMEMMKMIGK-----------------HK--NIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSY 144 (334)
T ss_dssp --HHHHHHHHHHHHCC-----------------CT--TBCCEEEEECSSSCCEEEEECCTTCBHHHHHHTTSCTTCCSCC
T ss_pred --HHHHHHHHHHHhhc-----------------CC--CEeeEEEEEccCCceEEEEECCCCCcHHHHHHHhccccccccc
Confidence 23445555555521 11 1233332 456789999999999987743211
Q ss_pred -------cCCCHHHHHHHHHHHH--HHHHHhcCccccCCCCCCeEEccCCCCceEEEecccccccC
Q 002031 263 -------FGVNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 319 (977)
Q Consensus 263 -------~~~~~~~l~~~l~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~ 319 (977)
..++...+...+.+++ +..+|..|++|+|+||.||+++.+ +.++|+|||++..+.
T Consensus 145 ~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~--~~~kL~Dfg~~~~~~ 208 (334)
T 2pvf_A 145 DINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTEN--NVMKIADFGLARDIN 208 (334)
T ss_dssp --------CCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTT--CCEEECCCTTCEECT
T ss_pred cccccccccCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCccceEEEcCC--CCEEEcccccccccc
Confidence 1245555555555544 788999999999999999999865 899999999987664
|
| >3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 4asx_A* 2qlu_A* | Back alignment and structure |
|---|
Probab=99.35 E-value=5.8e-13 Score=148.23 Aligned_cols=75 Identities=21% Similarity=0.207 Sum_probs=60.4
Q ss_pred ceEEeeccCCCCCCChHHHHhcCCCHHHHHHHHHHHH--HHHHHhc----------CccccCCCCCCeEEccCCCCceEE
Q 002031 242 TVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--AHQIYVD----------GFFNGDPHPGNFLVSKDPPHRPIL 309 (977)
Q Consensus 242 ~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~--l~~i~~~----------G~~H~D~hPgNIlv~~~~~g~i~L 309 (977)
.+|||||++|.+|.++. ....++...+...+.++. +..+|.. |++|+|+||.|||++.+ +.++|
T Consensus 97 ~~lv~e~~~~g~L~~~l--~~~~~~~~~~~~i~~qi~~al~~LH~~~~~l~~~~~~~ivH~Dlkp~Nill~~~--~~~kL 172 (322)
T 3soc_A 97 LWLITAFHEKGSLSDFL--KANVVSWNELCHIAETMARGLAYLHEDIPGLKDGHKPAISHRDIKSKNVLLKNN--LTACI 172 (322)
T ss_dssp EEEEEECCTTCBHHHHH--HHCCBCHHHHHHHHHHHHHHHHHHTCCEEEETTEEECEEECSCCSGGGEEECTT--CCEEE
T ss_pred EEEEEecCCCCCHHHHH--HhcCCCHHHHHHHHHHHHHHHHHHHhhccccccccCCCEEeCCCChHhEEECCC--CeEEE
Confidence 38999999999998874 444566666665555544 7788888 99999999999999865 89999
Q ss_pred EecccccccCH
Q 002031 310 LDFGLTKKLSS 320 (977)
Q Consensus 310 iDFG~~~~l~~ 320 (977)
+|||++..+..
T Consensus 173 ~DFg~a~~~~~ 183 (322)
T 3soc_A 173 ADFGLALKFEA 183 (322)
T ss_dssp CCCTTCEEECT
T ss_pred ccCCccccccc
Confidence 99999976643
|
| >3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A | Back alignment and structure |
|---|
Probab=99.35 E-value=1.2e-12 Score=151.49 Aligned_cols=151 Identities=19% Similarity=0.227 Sum_probs=99.4
Q ss_pred cccccccccEEEEEEec-CCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCcHHHH
Q 002031 124 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (977)
Q Consensus 124 ~piasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea 202 (977)
+.||+|++|.||+|+.+ +|+.||||+..+.....-. .........+.+|+
T Consensus 141 ~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~-----------------------------~~~~~~~~~~~~E~ 191 (419)
T 3i6u_A 141 KTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGS-----------------------------AREADPALNVETEI 191 (419)
T ss_dssp EEEEECSSSEEEEEEETTTCCEEEEEEEEGGGGTTC-------------------------------------CCHHHHH
T ss_pred eEEeeCCCeEEEEEEECCCCcEEEEEEEEechhcccc-----------------------------cccchhHHHHHHHH
Confidence 56999999999999974 7899999997643210000 00001122466777
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeeecCCceEEeeccCCCCCCChHHHHhcCCCHHHHHHHHHHHH--HH
Q 002031 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQSSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--AH 280 (977)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~--l~ 280 (977)
+.+.++.+ ..-+.+-.++.....+|||||++|.+|.+... ....++...+...+.+++ +.
T Consensus 192 ~~l~~l~h-----------------pniv~l~~~~~~~~~~lv~e~~~~g~L~~~l~-~~~~~~~~~~~~i~~qi~~~l~ 253 (419)
T 3i6u_A 192 EILKKLNH-----------------PCIIKIKNFFDAEDYYIVLELMEGGELFDKVV-GNKRLKEATCKLYFYQMLLAVQ 253 (419)
T ss_dssp HHHHHCCC-----------------TTBCCCCEEEESSEEEEEEECCTTCBGGGGTS-SSCCCCHHHHHHHHHHHHHHHH
T ss_pred HHHHhCCC-----------------CCEeeEEEEEecCceEEEEEcCCCCcHHHHHh-ccCCCCHHHHHHHHHHHHHHHH
Confidence 77766532 11122223333555789999999999877532 223455555555555544 88
Q ss_pred HHHhcCccccCCCCCCeEEccCC-CCceEEEecccccccCHH
Q 002031 281 QIYVDGFFNGDPHPGNFLVSKDP-PHRPILLDFGLTKKLSSS 321 (977)
Q Consensus 281 ~i~~~G~~H~D~hPgNIlv~~~~-~g~i~LiDFG~~~~l~~~ 321 (977)
.+|..|++|||+||.|||++.++ ++.++|+|||++..+...
T Consensus 254 ~LH~~~ivHrDlkp~NIll~~~~~~~~~kl~DFG~a~~~~~~ 295 (419)
T 3i6u_A 254 YLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGET 295 (419)
T ss_dssp HHHHTTCCCSCCCGGGEEESSSSSSCCEEECCSSTTTSCC--
T ss_pred HHHHCCccccCCChHhEEEecCCCcceEEEeecccceecCCC
Confidence 89999999999999999997531 246999999999887653
|
| >2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A* | Back alignment and structure |
|---|
Probab=99.35 E-value=1.1e-12 Score=149.17 Aligned_cols=76 Identities=17% Similarity=0.185 Sum_probs=59.4
Q ss_pred cCCceEEeeccCCCCCCChHHHHhcCCCHHHHHHHHHHHH--HHHHHhcCccccCCCCCCeEEccCCCCceEEEeccccc
Q 002031 239 SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTK 316 (977)
Q Consensus 239 ~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~ 316 (977)
....+|||||++|.+|.+.... ...+....+...+.+++ +..+|..|++|||+||+|||++.+ |.++|+|||+++
T Consensus 111 ~~~~~lv~E~~~gg~L~~~l~~-~~~~~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIll~~~--g~ikL~DFG~a~ 187 (373)
T 2r5t_A 111 ADKLYFVLDYINGGELFYHLQR-ERCFLEPRARFYAAEIASALGYLHSLNIVYRDLKPENILLDSQ--GHIVLTDFGLCK 187 (373)
T ss_dssp SSEEEEEEECCCSCBHHHHHHH-HSSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTT--SCEEECCCCBCG
T ss_pred CCEEEEEEeCCCCCcHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCHHHEEECCC--CCEEEeeCcccc
Confidence 4556899999999998776432 23455555555444444 888999999999999999999865 899999999987
Q ss_pred c
Q 002031 317 K 317 (977)
Q Consensus 317 ~ 317 (977)
.
T Consensus 188 ~ 188 (373)
T 2r5t_A 188 E 188 (373)
T ss_dssp G
T ss_pred c
Confidence 5
|
| >4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A* | Back alignment and structure |
|---|
Probab=99.35 E-value=4e-13 Score=156.71 Aligned_cols=142 Identities=15% Similarity=0.101 Sum_probs=91.0
Q ss_pred cccccccccEEEEEEe-cCCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCcHHHH
Q 002031 124 TPLATASIAQVHRATL-VDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (977)
Q Consensus 124 ~piasaSigqV~~A~l-~~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea 202 (977)
+.||+|++|.||+|+. .+|+.||||+.++.....- + ....+.+|.
T Consensus 154 ~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~--~--------------------------------~~~~~~~e~ 199 (446)
T 4ejn_A 154 KLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAK--D--------------------------------EVAHTLTEN 199 (446)
T ss_dssp EEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHC----------------------------------------------
T ss_pred EEEeeCcCEEEEEEEEcCCCCEEEEEEEEhhhhhhh--H--------------------------------HHHHHHHHH
Confidence 6899999999999997 4799999999764211000 0 000112222
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeee-cCCceEEeeccCCCCCCChHHHHhcCCCHHHHHHHHHHHH--H
Q 002031 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--A 279 (977)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~--l 279 (977)
+.+..+++ ..-+.+-..+. ....+|||||++|.+|.+... ....++...+...+.+++ +
T Consensus 200 ~~l~~l~h-----------------~~iv~l~~~~~~~~~~~lv~e~~~~~~L~~~l~-~~~~~~~~~~~~~~~qi~~aL 261 (446)
T 4ejn_A 200 RVLQNSRH-----------------PFLTALKYSFQTHDRLCFVMEYANGGELFFHLS-RERVFSEDRARFYGAEIVSAL 261 (446)
T ss_dssp -CCCCCSC-----------------TTSCCEEEEEEETTEEEEEECCCSSCBHHHHHH-HHSCCCHHHHHHHHHHHHHHH
T ss_pred HHHHhCCC-----------------CeEeeEEEEEeeCCEEEEEEeeCCCCcHHHHHH-hcCCCCHHHHHHHHHHHHHHH
Confidence 22111110 11112222222 455689999999999876643 233456666555555544 8
Q ss_pred HHHHh-cCccccCCCCCCeEEccCCCCceEEEecccccccC
Q 002031 280 HQIYV-DGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 319 (977)
Q Consensus 280 ~~i~~-~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~ 319 (977)
..+|. .|++|||+||.|||++.+ +.++|+|||++....
T Consensus 262 ~~LH~~~giiHrDlkp~NIll~~~--~~~kl~DFG~a~~~~ 300 (446)
T 4ejn_A 262 DYLHSEKNVVYRDLKLENLMLDKD--GHIKITDFGLCKEGI 300 (446)
T ss_dssp HHHHHHTCCCCCCCCGGGEEECSS--SCEEECCCCCCCTTC
T ss_pred HHHhhcCCEEECCCCHHHEEECCC--CCEEEccCCCceecc
Confidence 88997 999999999999999865 899999999987643
|
| >3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus} | Back alignment and structure |
|---|
Probab=99.35 E-value=9.4e-13 Score=146.19 Aligned_cols=76 Identities=22% Similarity=0.303 Sum_probs=56.5
Q ss_pred eEEeeccCCCCCCChHHHHhc-----CCCHHHHHHHHHHHH--HHHHHhcCccccCCCCCCeEEccCCCCceEEEecccc
Q 002031 243 VLILEFMDGIRLNDCESLEAF-----GVNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLT 315 (977)
Q Consensus 243 vLVmE~i~G~~L~~~~~~~~~-----~~~~~~l~~~l~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~ 315 (977)
++||||++|.+|.++...... .++...+...+.+++ +..+|..|++|+|+||.|||++.+ +.++|+|||++
T Consensus 107 ~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~ivH~Dikp~NIli~~~--~~~kl~Dfg~a 184 (323)
T 3qup_A 107 MVILPFMKHGDLHAFLLASRIGENPFNLPLQTLVRFMVDIACGMEYLSSRNFIHRDLAARNCMLAED--MTVCVADFGLS 184 (323)
T ss_dssp EEEEECCTTCBHHHHHHHHHC---CCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECTT--SCEEECCCCC-
T ss_pred EEEEEeccCCcHHHHHHhhhccccccccCHHHHHHHHHHHHHHHHHHHcCCcccCCCCcceEEEcCC--CCEEEeecccc
Confidence 899999999999887543321 355566666555554 888999999999999999999865 89999999999
Q ss_pred cccCH
Q 002031 316 KKLSS 320 (977)
Q Consensus 316 ~~l~~ 320 (977)
..+..
T Consensus 185 ~~~~~ 189 (323)
T 3qup_A 185 RKIYS 189 (323)
T ss_dssp -----
T ss_pred ccccc
Confidence 87654
|
| >2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A* | Back alignment and structure |
|---|
Probab=99.35 E-value=1.5e-12 Score=144.75 Aligned_cols=151 Identities=19% Similarity=0.228 Sum_probs=98.8
Q ss_pred cccccccccEEEEEEec-CCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCcHHHH
Q 002031 124 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (977)
Q Consensus 124 ~piasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea 202 (977)
+.||+|++|.||+|+.+ +|+.||||+.++.....-. ........++.+|+
T Consensus 16 ~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~-----------------------------~~~~~~~~~~~~E~ 66 (322)
T 2ycf_A 16 KTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGS-----------------------------AREADPALNVETEI 66 (322)
T ss_dssp EEEEECSSEEEEEEEETTTTEEEEEEEECC--------------------------------------------CHHHHH
T ss_pred eEEecCCCEEEEEEEEcCCCcEEEEEEeehhhhhhcc-----------------------------cccchhhhhHHHHH
Confidence 67999999999999974 7899999998653210000 00001122466777
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeeecCCceEEeeccCCCCCCChHHHHhcCCCHHHHHHHHHHHH--HH
Q 002031 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQSSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--AH 280 (977)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~--l~ 280 (977)
+.+.++.+ ..-+.+-.++.....++||||++|.+|.+... ....++...+...+.+++ +.
T Consensus 67 ~~l~~l~h-----------------~~i~~~~~~~~~~~~~lv~e~~~~~~L~~~~~-~~~~~~~~~~~~~~~qi~~~l~ 128 (322)
T 2ycf_A 67 EILKKLNH-----------------PCIIKIKNFFDAEDYYIVLELMEGGELFDKVV-GNKRLKEATCKLYFYQMLLAVQ 128 (322)
T ss_dssp HHHHHCCC-----------------TTBCCEEEEEESSSEEEEEECCTTEETHHHHS-TTCCCCHHHHHHHHHHHHHHHH
T ss_pred HHHHhCCC-----------------CCCceEeeEEcCCceEEEEecCCCCcHHHHHh-ccCCCCHHHHHHHHHHHHHHHH
Confidence 76665532 11122223333556799999999999876532 223455555555555544 88
Q ss_pred HHHhcCccccCCCCCCeEEccCC-CCceEEEecccccccCHH
Q 002031 281 QIYVDGFFNGDPHPGNFLVSKDP-PHRPILLDFGLTKKLSSS 321 (977)
Q Consensus 281 ~i~~~G~~H~D~hPgNIlv~~~~-~g~i~LiDFG~~~~l~~~ 321 (977)
.+|..|++|+|+||.||+++.++ ++.++|+|||++..+...
T Consensus 129 ~lH~~~ivH~dlkp~NIl~~~~~~~~~~kl~Dfg~~~~~~~~ 170 (322)
T 2ycf_A 129 YLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGET 170 (322)
T ss_dssp HHHHTTEECCCCSGGGEEESSSSSSCCEEECCCTTCEECCCC
T ss_pred HHHHCCeeccCCCHHHEEEecCCCCCeEEEccCccceecccc
Confidence 89999999999999999998642 235999999999887643
|
| >3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A* | Back alignment and structure |
|---|
Probab=99.35 E-value=9.3e-13 Score=142.75 Aligned_cols=139 Identities=17% Similarity=0.184 Sum_probs=95.8
Q ss_pred cccccccccEEEEEEec-CCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCcHHHH
Q 002031 124 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (977)
Q Consensus 124 ~piasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea 202 (977)
+.||+|++|.||+|+.+ +++.||+|+..+..... .. .+.+|+
T Consensus 15 ~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~~~~----~~---------------------------------~~~~E~ 57 (277)
T 3f3z_A 15 NTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFVED----VD---------------------------------RFKQEI 57 (277)
T ss_dssp EEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCSC----HH---------------------------------HHHHHH
T ss_pred eEEeecCCEEEEEEEeCCCCcEEEEEeehhhccch----HH---------------------------------HHHHHH
Confidence 57999999999999975 68899999876432211 00 133455
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeee----cCCceEEeeccCCCCCCChHHHHhcCCCHHHHHHHHHHHH
Q 002031 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ----SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY 278 (977)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~----~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~ 278 (977)
+.+.++.+ ..|++++. ....++||||++|.+|.+... ....++...+...+.+++
T Consensus 58 ~~l~~l~h--------------------~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~-~~~~~~~~~~~~i~~~i~ 116 (277)
T 3f3z_A 58 EIMKSLDH--------------------PNIIRLYETFEDNTDIYLVMELCTGGELFERVV-HKRVFRESDAARIMKDVL 116 (277)
T ss_dssp HHHHTCCC--------------------TTBCCEEEEEECSSEEEEEEECCCSCBHHHHHH-HHCSCCHHHHHHHHHHHH
T ss_pred HHHHhCCC--------------------CCEeeEEEEEecCCeEEEEEeccCCCcHHHHHH-HcCCCCHHHHHHHHHHHH
Confidence 55444321 12333332 445689999999999877643 233456666665555554
Q ss_pred --HHHHHhcCccccCCCCCCeEEccC-CCCceEEEecccccccCH
Q 002031 279 --AHQIYVDGFFNGDPHPGNFLVSKD-PPHRPILLDFGLTKKLSS 320 (977)
Q Consensus 279 --l~~i~~~G~~H~D~hPgNIlv~~~-~~g~i~LiDFG~~~~l~~ 320 (977)
+..+|..|++|+|+||.||++..+ .++.++|+|||++..+..
T Consensus 117 ~~l~~lH~~~i~H~dlkp~Nil~~~~~~~~~~~l~Dfg~~~~~~~ 161 (277)
T 3f3z_A 117 SAVAYCHKLNVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKP 161 (277)
T ss_dssp HHHHHHHHTTEECCCCSGGGEEESSSSTTCCEEECCCTTCEECCT
T ss_pred HHHHHHHHCCccCCCCCHHHEEEecCCCCCcEEEEecccceeccC
Confidence 888999999999999999999321 347899999999987643
|
| >3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.35 E-value=4.7e-13 Score=149.07 Aligned_cols=141 Identities=17% Similarity=0.141 Sum_probs=91.0
Q ss_pred cccccccccEEEEEEec-CCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCcHHHH
Q 002031 124 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (977)
Q Consensus 124 ~piasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea 202 (977)
+.||+|++|.||+|+.+ +|+.||||+.+...... ....+.+|+
T Consensus 8 ~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~------------------------------------~~~~~~~E~ 51 (324)
T 3mtl_A 8 DKLGEGTYATVYKGKSKLTDNLVALKEIRLEHEEG------------------------------------APCTAIREV 51 (324)
T ss_dssp EEEEECSSEEEEEEEETTTCCEEEEEEECC------------------------------------------CCCCCCCH
T ss_pred EEEcCCCCEEEEEEEECCCCcEEEEEEEecccccc------------------------------------cchhHHHHH
Confidence 57999999999999985 89999999876432110 001122344
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeee-cCCceEEeeccCCCCCCChHHHHhcCCCHHHHHHHHHHHH--H
Q 002031 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--A 279 (977)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~--l 279 (977)
+.+.++.+ ..-+.+-.++. ....+|||||++| +|.+........++...+...+.+++ +
T Consensus 52 ~~l~~l~h-----------------~~iv~~~~~~~~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~qi~~aL 113 (324)
T 3mtl_A 52 SLLKDLKH-----------------ANIVTLHDIIHTEKSLTLVFEYLDK-DLKQYLDDCGNIINMHNVKLFLFQLLRGL 113 (324)
T ss_dssp HHHSCCCC-----------------TTBCCEEEEEECSSCEEEEEECCSE-EHHHHHHHTTTCCCHHHHHHHHHHHHHHH
T ss_pred HHHHhcCC-----------------CCCCeeeeEEeeCCEEEEEeccccc-CHHHHHHhcCCCCCHHHHHHHHHHHHHHH
Confidence 44333211 11112222222 4556899999987 55554332223355555555555544 8
Q ss_pred HHHHhcCccccCCCCCCeEEccCCCCceEEEecccccccCH
Q 002031 280 HQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 320 (977)
Q Consensus 280 ~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 320 (977)
..+|..|++|+|+||+|||++.+ +.++|+|||++.....
T Consensus 114 ~~LH~~~ivH~Dikp~NIl~~~~--~~~kl~Dfg~a~~~~~ 152 (324)
T 3mtl_A 114 AYCHRQKVLHRDLKPQNLLINER--GELKLADFGLARAKSI 152 (324)
T ss_dssp HHHHHTTEEESSCCGGGEEECTT--CCEEECSSSEEECC--
T ss_pred HHHHHCCccCCCcCHHHEEECCC--CCEEEccCcccccccC
Confidence 88999999999999999999865 8999999999886653
|
| >3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 4dea_A* 4deb_A* ... | Back alignment and structure |
|---|
Probab=99.35 E-value=8.6e-13 Score=143.30 Aligned_cols=142 Identities=18% Similarity=0.125 Sum_probs=95.1
Q ss_pred ccccccccccEEEEEEec-CCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCcHHH
Q 002031 123 ETPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSE 201 (977)
Q Consensus 123 ~~piasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~E 201 (977)
.+.||+|++|.||+|+.+ +++.||||+..+....... .+-.+.+|
T Consensus 14 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~----------------------------------~~~~~~~e 59 (279)
T 3fdn_A 14 GRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAG----------------------------------VEHQLRRE 59 (279)
T ss_dssp EEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHHT----------------------------------CHHHHHHH
T ss_pred eeEEecCCCeEEEEEEEccCCcEEEEEEEeccccchhh----------------------------------HHHHHHHH
Confidence 368999999999999974 6889999987542111000 00123344
Q ss_pred HHHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeee----cCCceEEeeccCCCCCCChHHHHhcCCCHHHHHHHHHHH
Q 002031 202 AENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ----SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRA 277 (977)
Q Consensus 202 a~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~----~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~ 277 (977)
+..+.++.+ ..|++++. ....++||||++|.+|.+... ....++...+...+.++
T Consensus 60 ~~~l~~l~h--------------------~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~l~-~~~~~~~~~~~~~~~qi 118 (279)
T 3fdn_A 60 VEIQSHLRH--------------------PNILRLYGYFHDATRVYLILEYAPLGTVYRELQ-KLSKFDEQRTATYITEL 118 (279)
T ss_dssp HHHHTTCCC--------------------TTBCCEEEEEECSSEEEEEECCCTTEEHHHHHH-HHSSCCHHHHHHHHHHH
T ss_pred HHHHHcCCC--------------------CCCcchhheEecCCEEEEEEecCCCCcHHHHHH-hcCCCCHHHHHHHHHHH
Confidence 444333211 12333332 455689999999999877643 22446666665555554
Q ss_pred H--HHHHHhcCccccCCCCCCeEEccCCCCceEEEecccccccCHH
Q 002031 278 Y--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSSS 321 (977)
Q Consensus 278 ~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~~ 321 (977)
+ +..+|..|++|+|+||+||+++.+ +.++|+|||++......
T Consensus 119 ~~~l~~LH~~~i~H~dlkp~Nili~~~--~~~~l~Dfg~~~~~~~~ 162 (279)
T 3fdn_A 119 ANALSYCHSKRVIHRDIKPENLLLGSA--GELKIADFGWSVHAPSS 162 (279)
T ss_dssp HHHHHHHHTTTCEECCCCGGGEEECTT--SCEEECSCCEESCC---
T ss_pred HHHHHHHHhCCEecccCChHhEEEcCC--CCEEEEeccccccCCcc
Confidence 4 888999999999999999999865 89999999998766543
|
| >1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A | Back alignment and structure |
|---|
Probab=99.35 E-value=9.8e-13 Score=155.52 Aligned_cols=139 Identities=19% Similarity=0.151 Sum_probs=98.4
Q ss_pred cccccccccEEEEEEec-CCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCcHHHH
Q 002031 124 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (977)
Q Consensus 124 ~piasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea 202 (977)
+.||+|++|.||+|+.+ +++.||||+.+.+... .-+|.+|+
T Consensus 226 ~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~~~~--------------------------------------~~~~~~E~ 267 (495)
T 1opk_A 226 HKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME--------------------------------------VEEFLKEA 267 (495)
T ss_dssp EESGGGTTSSEEEEEEGGGTEEEEEEECCSSSSC--------------------------------------HHHHHHHH
T ss_pred eEecCCCCeEEEEEEEcCCCeEEEEEEecCcccc--------------------------------------hHHHHHHH
Confidence 68999999999999986 5899999998654211 00245566
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeee-cCCceEEeeccCCCCCCChHHHH-hcCCCHHHHHHHHHHHH--
Q 002031 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLE-AFGVNKQKVVEEITRAY-- 278 (977)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLVmE~i~G~~L~~~~~~~-~~~~~~~~l~~~l~~~~-- 278 (977)
+.+.++.+ ..-+.+-.++. ....+|||||++|.+|.++.... ...++...+...+.+++
T Consensus 268 ~~l~~l~h-----------------pniv~l~~~~~~~~~~~lv~E~~~~g~L~~~l~~~~~~~~~~~~~~~i~~qi~~~ 330 (495)
T 1opk_A 268 AVMKEIKH-----------------PNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSA 330 (495)
T ss_dssp HHHHHCCC-----------------TTBCCEEEEECSSSSCEEEEECCTTCBHHHHHHHSCTTTSCHHHHHHHHHHHHHH
T ss_pred HHHHhcCC-----------------CCEeeEEEEEecCCcEEEEEEccCCCCHHHHHHhcCcCCCCHHHHHHHHHHHHHH
Confidence 66665532 01122222222 45678999999999998774321 12355555555555544
Q ss_pred HHHHHhcCccccCCCCCCeEEccCCCCceEEEecccccccC
Q 002031 279 AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 319 (977)
Q Consensus 279 l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~ 319 (977)
+..+|..|++||||||.|||++.+ +.++|+|||+++.+.
T Consensus 331 L~~LH~~~ivHrDlkp~NIll~~~--~~~kl~DFG~a~~~~ 369 (495)
T 1opk_A 331 MEYLEKKNFIHRNLAARNCLVGEN--HLVKVADFGLSRLMT 369 (495)
T ss_dssp HHHHHHTTEECSCCSGGGEEECGG--GCEEECCTTCEECCT
T ss_pred HHHHHhCCcccCCCChhhEEECCC--CcEEEeecccceecc
Confidence 888999999999999999999865 899999999998764
|
| >2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A* | Back alignment and structure |
|---|
Probab=99.35 E-value=1.3e-12 Score=145.10 Aligned_cols=137 Identities=19% Similarity=0.168 Sum_probs=84.2
Q ss_pred cccccccccEEEEEEec-CCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCcHHHH
Q 002031 124 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (977)
Q Consensus 124 ~piasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea 202 (977)
+.||+|++|.||+|+.+ +|+.||||+.+....... .-.+.+|+
T Consensus 11 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~------------------------------------~~~~~~E~ 54 (317)
T 2pmi_A 11 EKLGNGTYATVYKGLNKTTGVYVALKEVKLDSEEGT------------------------------------PSTAIREI 54 (317)
T ss_dssp --------CEEEEEECSSSCCEEEEEEEECCSTTCS------------------------------------CHHHHHHH
T ss_pred eEECCCCCEEEEEEEECCCCcEEEEEEeeccccccc------------------------------------HHHHHHHH
Confidence 57999999999999974 799999998764321100 00123344
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeee----cCCceEEeeccCCCCCCChHHHHh-----cCCCHHHHHHH
Q 002031 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ----SSETVLILEFMDGIRLNDCESLEA-----FGVNKQKVVEE 273 (977)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~----~~~~vLVmE~i~G~~L~~~~~~~~-----~~~~~~~l~~~ 273 (977)
+.+.++.+ ..|.+++. ....+|||||++| +|.++..... .+++...+...
T Consensus 55 ~~l~~l~h--------------------p~iv~~~~~~~~~~~~~lv~e~~~~-~L~~~l~~~~~~~~~~~~~~~~~~~~ 113 (317)
T 2pmi_A 55 SLMKELKH--------------------ENIVRLYDVIHTENKLTLVFEFMDN-DLKKYMDSRTVGNTPRGLELNLVKYF 113 (317)
T ss_dssp HHHTTCCB--------------------TTBCCEEEEECCTTEEEEEEECCCC-BHHHHHHHHHSSSCCCCCCHHHHHHH
T ss_pred HHHHhcCC--------------------CCcceEEEEEEECCeEEEEEEecCC-CHHHHHHhccccccccCCCHHHHHHH
Confidence 44333311 11233332 3456899999997 6665543222 23555554444
Q ss_pred HHHHH--HHHHHhcCccccCCCCCCeEEccCCCCceEEEecccccccC
Q 002031 274 ITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 319 (977)
Q Consensus 274 l~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~ 319 (977)
+.+++ +..+|..|++|+|+||.|||++.+ ++++|+|||++..+.
T Consensus 114 ~~qi~~aL~~lH~~~ivH~Dlkp~NIl~~~~--~~~kl~Dfg~~~~~~ 159 (317)
T 2pmi_A 114 QWQLLQGLAFCHENKILHRDLKPQNLLINKR--GQLKLGDFGLARAFG 159 (317)
T ss_dssp HHHHHHHHHHHHHTTEECCCCCGGGEEECTT--CCEEECCCSSCEETT
T ss_pred HHHHHHHHHHHHHCCeeeCCCChHHeEEcCC--CCEEECcCccceecC
Confidence 44443 788999999999999999999865 899999999987653
|
| >3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A* | Back alignment and structure |
|---|
Probab=99.34 E-value=1.1e-12 Score=152.22 Aligned_cols=144 Identities=17% Similarity=0.209 Sum_probs=94.7
Q ss_pred ccccccccccEEEEEEec-CCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCcHHH
Q 002031 123 ETPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSE 201 (977)
Q Consensus 123 ~~piasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~E 201 (977)
.+.||.|++|.||+|+.+ +|+.||||+.+........ . -.+.+|
T Consensus 31 ~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~--~---------------------------------~~~~~E 75 (432)
T 3n9x_A 31 KHLIGRGSYGYVYLAYDKNTEKNVAIKKVNRMFEDLID--C---------------------------------KRILRE 75 (432)
T ss_dssp EEEEEEETTEEEEEEEETTTTEEEEEEEECSTTTSHHH--H---------------------------------HHHHHH
T ss_pred EEEEeecCCEEEEEEEECCCCcEEEEEEeCchhcChHH--H---------------------------------HHHHHH
Confidence 368999999999999974 7899999998653321110 0 023445
Q ss_pred HHHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeee-c-----CCceEEeeccCCCCCCChHHHHhcCCCHHHHHHHHH
Q 002031 202 AENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-S-----SETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEIT 275 (977)
Q Consensus 202 a~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~-----~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~ 275 (977)
++.+.++++ ...+.+-.++. . ...+|||||++| +|.++.. ....++...+...+.
T Consensus 76 ~~~l~~l~h-----------------~nIv~l~~~~~~~~~~~~~~~~lv~e~~~~-~L~~~~~-~~~~l~~~~~~~i~~ 136 (432)
T 3n9x_A 76 ITILNRLKS-----------------DYIIRLYDLIIPDDLLKFDELYIVLEIADS-DLKKLFK-TPIFLTEEHIKTILY 136 (432)
T ss_dssp HHHHHHCCC-----------------TTBCCEEEECCCSCTTTCCCEEEEEECCSE-EHHHHHH-SSCCCCHHHHHHHHH
T ss_pred HHHHHHcCC-----------------CCcceEEEEEecCCCCcCCeEEEEEecCCc-CHHHHHh-ccCCCCHHHHHHHHH
Confidence 555555432 01122222221 1 346899999986 6655432 112356666666555
Q ss_pred HHH--HHHHHhcCccccCCCCCCeEEccCCCCceEEEecccccccCHHH
Q 002031 276 RAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSSSM 322 (977)
Q Consensus 276 ~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~~~ 322 (977)
+++ +..+|..|++|||+||+|||++.+ +.++|+|||+++.+....
T Consensus 137 qil~aL~~LH~~givHrDlkp~NILl~~~--~~~kL~DFGla~~~~~~~ 183 (432)
T 3n9x_A 137 NLLLGENFIHESGIIHRDLKPANCLLNQD--CSVKVCDFGLARTINSEK 183 (432)
T ss_dssp HHHHHHHHHHHTTEECCCCCGGGEEECTT--CCEEECCCTTCEEC----
T ss_pred HHHHHHHHHHHCCCCCCCCCHHHeEECCC--CCEEEccCCCcccccccc
Confidence 554 889999999999999999999865 899999999999886543
|
| >1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=99.34 E-value=1.5e-12 Score=145.97 Aligned_cols=139 Identities=17% Similarity=0.118 Sum_probs=94.9
Q ss_pred cccccccccEEEEEEe------cCCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccC
Q 002031 124 TPLATASIAQVHRATL------VDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELD 197 (977)
Q Consensus 124 ~piasaSigqV~~A~l------~~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld 197 (977)
+.||+|++|.||+|+. .+++.||||+.++...... .-.
T Consensus 51 ~~lG~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~------------------------------------~~~ 94 (344)
T 1rjb_A 51 KVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSE------------------------------------REA 94 (344)
T ss_dssp EEEEECSSEEEEEEEEESCSSSSCEEEEEEEEECC------------------------------------------CHH
T ss_pred eeecCCCCceeEEeeeeccccCCcceEEEEEecccccCHHH------------------------------------HHH
Confidence 6899999999999996 2467899999875321100 012
Q ss_pred cHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeee----cCCceEEeeccCCCCCCChHHHHhc----------
Q 002031 198 FNSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ----SSETVLILEFMDGIRLNDCESLEAF---------- 263 (977)
Q Consensus 198 ~~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~----~~~~vLVmE~i~G~~L~~~~~~~~~---------- 263 (977)
+.+|+..+.++.. + ..|++++. ....+|||||++|.+|.++......
T Consensus 95 ~~~E~~~l~~l~~-----------------h--p~iv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~ 155 (344)
T 1rjb_A 95 LMSELKMMTQLGS-----------------H--ENIVNLLGACTLSGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYE 155 (344)
T ss_dssp HHHHHHHHHHHCC-----------------C--TTBCCEEEEECSSSSCEEEEECCTTCBHHHHHHTTTTCC--------
T ss_pred HHHHHHHHHhhcC-----------------C--CCeeeEEEEEeeCCccEEEEecCCCCcHHHHHhhccccccccccchh
Confidence 4456666665521 1 12333332 4567899999999999876432211
Q ss_pred ------------CCCHHHHHHHHHHHH--HHHHHhcCccccCCCCCCeEEccCCCCceEEEecccccccC
Q 002031 264 ------------GVNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 319 (977)
Q Consensus 264 ------------~~~~~~l~~~l~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~ 319 (977)
.++...+...+.+++ +..+|..|++|+|+||.||+++.+ +.++|+|||++..+.
T Consensus 156 ~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dikp~NIll~~~--~~~kL~Dfg~~~~~~ 223 (344)
T 1rjb_A 156 NQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEFKSCVHRDLAARNVLVTHG--KVVKICDFGLARDIM 223 (344)
T ss_dssp -------------CCHHHHHHHHHHHHHHHHHHHHTTEEETTCSGGGEEEETT--TEEEECCCGGGSCGG
T ss_pred hhcccccccccccCCHHHHHHHHHHHHHHHHHHHhCCcccCCCChhhEEEcCC--CcEEeCCCccCcccc
Confidence 134455555555544 788999999999999999999865 899999999997664
|
| >1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A* | Back alignment and structure |
|---|
Probab=99.34 E-value=1.7e-12 Score=140.95 Aligned_cols=146 Identities=14% Similarity=0.122 Sum_probs=96.4
Q ss_pred cccccccccEEEEEEec-CCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCcHHHH
Q 002031 124 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (977)
Q Consensus 124 ~piasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea 202 (977)
+.||+|++|.||+|+.+ +|+.||||+.+........ +.++.+|.
T Consensus 17 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~-----------------------------------~~~~~~e~ 61 (289)
T 1x8b_A 17 EKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVD-----------------------------------EQNALREV 61 (289)
T ss_dssp EEEEEETTEEEEEEEETTTCCEEEEEEEECCCTTSHH-----------------------------------HHHHHHHH
T ss_pred hhhcCCCceEEEEEEEcCCCceEEEEEecccccccHH-----------------------------------HHHHHHHH
Confidence 67999999999999985 8999999998754321110 11223344
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeee-cCCceEEeeccCCCCCCChHHHHh---cCCCHHHHHHHHHHHH
Q 002031 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLEA---FGVNKQKVVEEITRAY 278 (977)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLVmE~i~G~~L~~~~~~~~---~~~~~~~l~~~l~~~~ 278 (977)
..+.++. .+ ..-+.+-.++. ....++||||++|.+|.++..... ..++...+...+.+++
T Consensus 62 ~~~~~l~---~h-------------~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~ 125 (289)
T 1x8b_A 62 YAHAVLG---QH-------------SHVVRYFSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVG 125 (289)
T ss_dssp HHHHHSC---SC-------------TTBCCEEEEEEETTEEEEEEECCTTCBHHHHHHHHHHHTCCCCHHHHHHHHHHHH
T ss_pred HHHHHhC---CC-------------CCeeeeeeeeecCCeEEEEEEecCCCcHHHHHHhhcccccCCCHHHHHHHHHHHH
Confidence 4333321 10 11112222222 456789999999999988754321 3356666666555554
Q ss_pred --HHHHHhcCccccCCCCCCeEEccC-----------------CCCceEEEecccccccCH
Q 002031 279 --AHQIYVDGFFNGDPHPGNFLVSKD-----------------PPHRPILLDFGLTKKLSS 320 (977)
Q Consensus 279 --l~~i~~~G~~H~D~hPgNIlv~~~-----------------~~g~i~LiDFG~~~~l~~ 320 (977)
+..+|..|++|+|+||.||+++.+ ....++|+|||++..+..
T Consensus 126 ~al~~lH~~~ivH~Dikp~NIl~~~~~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~~~~~~~ 186 (289)
T 1x8b_A 126 RGLRYIHSMSLVHMDIKPSNIFISRTSIPNAASEEGDEDDWASNKVMFKIGDLGHVTRISS 186 (289)
T ss_dssp HHHHHHHHTTEECSCCSGGGEEEC--------------------CCCEEECCCTTCEETTC
T ss_pred HHHHHHHhCCEeecCCCHHHEEEcCCCCCcccccccccccccCCceEEEEcccccccccCC
Confidence 888999999999999999999843 124799999999887643
|
| >4fl3_A Tyrosine-protein kinase SYK; transferase; HET: ANP; 1.90A {Homo sapiens} PDB: 4fl2_A* 1a81_A* 1csy_A* 1csz_A* | Back alignment and structure |
|---|
Probab=99.34 E-value=7.2e-13 Score=161.25 Aligned_cols=142 Identities=18% Similarity=0.238 Sum_probs=99.5
Q ss_pred cccccccccEEEEEEe---cCCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCcHH
Q 002031 124 TPLATASIAQVHRATL---VDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNS 200 (977)
Q Consensus 124 ~piasaSigqV~~A~l---~~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~ 200 (977)
+.||+|++|.||+|.+ ++++.||||+.+........ .-++.+
T Consensus 375 ~~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~-----------------------------------~~~~~~ 419 (635)
T 4fl3_A 375 KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPAL-----------------------------------KDELLA 419 (635)
T ss_dssp EEEEECSSEEEEEEEEECSSCEEEEEEEEECGGGGCGGG-----------------------------------HHHHHH
T ss_pred CEeccCCCEEEEEEEEcCCCcceEEEEEEeccccCCHHH-----------------------------------HHHHHH
Confidence 4799999999999965 35789999998754321100 012455
Q ss_pred HHHHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeeecCCceEEeeccCCCCCCChHHHHhcCCCHHHHHHHHHHHH--
Q 002031 201 EAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQSSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY-- 278 (977)
Q Consensus 201 Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~-- 278 (977)
|++.+.++++ ..-+.+-.++.....+|||||++|.+|.++.. ....++...+...+.+++
T Consensus 420 E~~il~~l~h-----------------pnIv~l~~~~~~~~~~lv~E~~~~g~L~~~l~-~~~~l~~~~~~~i~~qi~~~ 481 (635)
T 4fl3_A 420 EANVMQQLDN-----------------PYIVRMIGICEAESWMLVMEMAELGPLNKYLQ-QNRHVKDKNIIELVHQVSMG 481 (635)
T ss_dssp HHHHHHHCCC-----------------TTBCCEEEEEESSSEEEEEECCTTEEHHHHHH-HCTTCCHHHHHHHHHHHHHH
T ss_pred HHHHHHhCCC-----------------CCEeeEEEEEecCCEEEEEEccCCCCHHHHHh-hCCCCCHHHHHHHHHHHHHH
Confidence 6666665532 01122222333455689999999999988753 223456666666555554
Q ss_pred HHHHHhcCccccCCCCCCeEEccCCCCceEEEecccccccCH
Q 002031 279 AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 320 (977)
Q Consensus 279 l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 320 (977)
+..+|..|++||||||.|||++.+ +.++|+|||+++.+..
T Consensus 482 L~yLH~~~iiHrDLkp~NILl~~~--~~~kL~DFGla~~~~~ 521 (635)
T 4fl3_A 482 MKYLEESNFVHRDLAARNVLLVTQ--HYAKISDFGLSKALRA 521 (635)
T ss_dssp HHHHHHTTCCCSCCSGGGEEEEET--TEEEECCTTHHHHTTC
T ss_pred HHHHHHCCEeCCCCChHhEEEeCC--CCEEEEEcCCcccccc
Confidence 888999999999999999999966 8999999999987754
|
| >3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} SCOP: d.144.1.7 PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ... | Back alignment and structure |
|---|
Probab=99.34 E-value=1.3e-12 Score=142.41 Aligned_cols=139 Identities=20% Similarity=0.182 Sum_probs=96.0
Q ss_pred cccccccccEEEEEEec-CCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCcHHHH
Q 002031 124 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (977)
Q Consensus 124 ~piasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea 202 (977)
+.||+|++|.||+|+.+ +|+.||||+.+.+.... + .+.+|+
T Consensus 19 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~----------------------------~----------~~~~E~ 60 (288)
T 3kfa_A 19 HKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEV----------------------------E----------EFLKEA 60 (288)
T ss_dssp EESGGGTTCSEEEEEEGGGTEEEEEEEECSCSTHH----------------------------H----------HHHHHH
T ss_pred eecCCCCceeEEEeEecCCCEEEEEEecCcCHHHH----------------------------H----------HHHHHH
Confidence 68999999999999985 58999999986542210 0 134455
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeee-cCCceEEeeccCCCCCCChHHHH-hcCCCHHHHHHHHHHHH--
Q 002031 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLE-AFGVNKQKVVEEITRAY-- 278 (977)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLVmE~i~G~~L~~~~~~~-~~~~~~~~l~~~l~~~~-- 278 (977)
+.+.++.+ ..-+.+-.++. ....++||||++|.+|.++.... ...++...+...+.+++
T Consensus 61 ~~l~~l~h-----------------~~i~~~~~~~~~~~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~i~~~i~~~ 123 (288)
T 3kfa_A 61 AVMKEIKH-----------------PNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSA 123 (288)
T ss_dssp HHHHHCCC-----------------TTBCCEEEEECSSSSEEEEEECCTTEEHHHHHHHCCTTTSCHHHHHHHHHHHHHH
T ss_pred HHHHhCCC-----------------CCEeeEEEEEccCCCEEEEEEcCCCCcHHHHHHhcccCCccHhHHHHHHHHHHHH
Confidence 55554422 01112222222 45568999999999998774321 12255555555554544
Q ss_pred HHHHHhcCccccCCCCCCeEEccCCCCceEEEecccccccC
Q 002031 279 AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 319 (977)
Q Consensus 279 l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~ 319 (977)
+..+|..|++|+|+||.||+++.+ +.++|+|||++..+.
T Consensus 124 l~~lH~~~i~H~dikp~Nil~~~~--~~~~l~Dfg~~~~~~ 162 (288)
T 3kfa_A 124 MEYLEKKNFIHRDLAARNCLVGEN--HLVKVADFGLSRLMT 162 (288)
T ss_dssp HHHHHHHTCCCSCCSGGGEEECGG--GCEEECCCCGGGTSC
T ss_pred HHHHHHCCccCCCCCcceEEEcCC--CCEEEccCccceecc
Confidence 888999999999999999999865 889999999987654
|
| >1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C | Back alignment and structure |
|---|
Probab=99.34 E-value=1.6e-12 Score=149.32 Aligned_cols=139 Identities=18% Similarity=0.142 Sum_probs=92.4
Q ss_pred cccccccccEEEEEEec-CCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCcHHHH
Q 002031 124 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (977)
Q Consensus 124 ~piasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea 202 (977)
+.||.|++|.||+|+.+ +|+.||||+.+... . +.+|.
T Consensus 68 ~~LG~G~~g~V~~~~~~~~~~~vAiK~~~~~~--~----------------------------------------~~~E~ 105 (400)
T 1nxk_A 68 QVLGLGINGKVLQIFNKRTQEKFALKMLQDCP--K----------------------------------------ARREV 105 (400)
T ss_dssp EEEEEETTEEEEEEEETTTCCEEEEEEEECSH--H----------------------------------------HHHHH
T ss_pred ceeeeccCeEEEEEEECCCCCEEEEEEeCcch--h----------------------------------------HHHHH
Confidence 57999999999999975 79999999875321 1 11222
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeee-----cCCceEEeeccCCCCCCChHHHH-hcCCCHHHHHHHHHH
Q 002031 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-----SSETVLILEFMDGIRLNDCESLE-AFGVNKQKVVEEITR 276 (977)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-----~~~~vLVmE~i~G~~L~~~~~~~-~~~~~~~~l~~~l~~ 276 (977)
..+.+.. .+ ...+.+-.++. ....+|||||++|++|.++.... ...++...+...+.+
T Consensus 106 ~~~~~~~---~h-------------p~iv~l~~~~~~~~~~~~~~~lv~E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~q 169 (400)
T 1nxk_A 106 ELHWRAS---QC-------------PHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKS 169 (400)
T ss_dssp HHHHHHT---TS-------------TTBCCEEEEEEEEETTEEEEEEEEECCCSEEHHHHHHCC---CCBHHHHHHHHHH
T ss_pred HHHHHhc---CC-------------CCcceEeEEEeecccCCcEEEEEEEeCCCCcHHHHHHHhCCCCCCHHHHHHHHHH
Confidence 2222211 10 01122222222 22358999999999997764311 123566666665555
Q ss_pred HH--HHHHHhcCccccCCCCCCeEEccCC-CCceEEEecccccccCH
Q 002031 277 AY--AHQIYVDGFFNGDPHPGNFLVSKDP-PHRPILLDFGLTKKLSS 320 (977)
Q Consensus 277 ~~--l~~i~~~G~~H~D~hPgNIlv~~~~-~g~i~LiDFG~~~~l~~ 320 (977)
++ +..+|..|++||||||+|||++.+. ++.++|+|||++.....
T Consensus 170 i~~aL~~LH~~~ivHrDlkp~Nill~~~~~~~~~kl~DFG~a~~~~~ 216 (400)
T 1nxk_A 170 IGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTS 216 (400)
T ss_dssp HHHHHHHHHHTTEECCCCCGGGEEESSSSTTCCEEECCCTTCEECC-
T ss_pred HHHHHHHHHHCCccccCcCcceEEEecCCCCccEEEEecccccccCC
Confidence 54 8889999999999999999998631 47899999999987764
|
| >2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A* | Back alignment and structure |
|---|
Probab=99.34 E-value=1.6e-12 Score=140.75 Aligned_cols=142 Identities=17% Similarity=0.251 Sum_probs=98.0
Q ss_pred ccccccccccEEEEEEec-CCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCcHHH
Q 002031 123 ETPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSE 201 (977)
Q Consensus 123 ~~piasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~E 201 (977)
.+.||+|++|.||+|+.+ +|+.||||+.++...... + .. -.+.+|
T Consensus 16 ~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~--~----------------------~~----------~~~~~e 61 (276)
T 2h6d_A 16 GDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSL--D----------------------VV----------GKIKRE 61 (276)
T ss_dssp EEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHT--T----------------------CH----------HHHHHH
T ss_pred EeeecCCCCeEEEEEEECCCCceEEEEEeccccccch--h----------------------HH----------HHHHHH
Confidence 368999999999999985 899999998764211000 0 00 023345
Q ss_pred HHHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceee---e-cCCceEEeeccCCCCCCChHHHHhcCCCHHHHHHHHHHH
Q 002031 202 AENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVI---Q-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRA 277 (977)
Q Consensus 202 a~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~---~-~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~ 277 (977)
+..+..+++ ..|++++ . ....++||||++|.+|.++... ...++...+...+.++
T Consensus 62 ~~~l~~l~h--------------------~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~-~~~~~~~~~~~~~~qi 120 (276)
T 2h6d_A 62 IQNLKLFRH--------------------PHIIKLYQVISTPTDFFMVMEYVSGGELFDYICK-HGRVEEMEARRLFQQI 120 (276)
T ss_dssp HHHHHTCCC--------------------TTBCCEEEEEECSSEEEEEEECCCSCBHHHHHHH-HCSCCHHHHHHHHHHH
T ss_pred HHHHhcCCC--------------------CCEeEEEEEEecCCeEEEEEeccCCCcHHHHHhc-cCCCCHHHHHHHHHHH
Confidence 555443321 1233333 2 4556899999999999877532 2345665555555554
Q ss_pred H--HHHHHhcCccccCCCCCCeEEccCCCCceEEEecccccccCHH
Q 002031 278 Y--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSSS 321 (977)
Q Consensus 278 ~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~~ 321 (977)
+ +..+|..|++|+|+||.||+++.+ ++++|+|||++..+...
T Consensus 121 ~~~l~~lH~~~i~H~dl~p~Nil~~~~--~~~~l~dfg~~~~~~~~ 164 (276)
T 2h6d_A 121 LSAVDYCHRHMVVHRDLKPENVLLDAH--MNAKIADFGLSNMMSDG 164 (276)
T ss_dssp HHHHHHHHHHCSSCCCCCGGGEEECTT--SCEEECCCCGGGCCCC-
T ss_pred HHHHHHHHHCCCccCCCChhhEEECCC--CCEEEeecccccccCCC
Confidence 4 788999999999999999999865 89999999999887653
|
| >2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B | Back alignment and structure |
|---|
Probab=99.34 E-value=1.5e-12 Score=147.54 Aligned_cols=144 Identities=18% Similarity=0.214 Sum_probs=96.4
Q ss_pred cccccccccEEEEEEec-CCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCcHHHH
Q 002031 124 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (977)
Q Consensus 124 ~piasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea 202 (977)
+.||.|++|.||+|+.+ +|+.||||+.+...... .+.. .+.+|+
T Consensus 35 ~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~--~~~~---------------------------------~~~~E~ 79 (362)
T 2bdw_A 35 EELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSA--RDFQ---------------------------------KLEREA 79 (362)
T ss_dssp EEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCH--HHHH---------------------------------HHHHHH
T ss_pred eEEecCCCeEEEEEEECCCCCEEEEEEEEcccCCH--HHHH---------------------------------HHHHHH
Confidence 57999999999999975 79999999986432110 0100 234555
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeee-cCCceEEeeccCCCCCCChHHHHhcCCCHHHHHHHHHHHH--H
Q 002031 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--A 279 (977)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~--l 279 (977)
+.+.++.+ ..-+.+-.++. ....+|||||++|.+|.+... ....++...+...+.+++ +
T Consensus 80 ~il~~l~h-----------------pnIv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~-~~~~~~~~~~~~~~~qi~~al 141 (362)
T 2bdw_A 80 RICRKLQH-----------------PNIVRLHDSIQEESFHYLVFDLVTGGELFEDIV-AREFYSEADASHCIQQILESI 141 (362)
T ss_dssp HHHHHCCC-----------------TTBCCEEEEEECSSEEEEEECCCCSCBHHHHHT-TCSCCCHHHHHHHHHHHHHHH
T ss_pred HHHHhCCC-----------------CCCCeEEEEEEeCCEEEEEEecCCCCCHHHHHH-HcCCCCHHHHHHHHHHHHHHH
Confidence 55554421 11122222232 455689999999998866532 122345555555555544 8
Q ss_pred HHHHhcCccccCCCCCCeEEccCC-CCceEEEecccccccCH
Q 002031 280 HQIYVDGFFNGDPHPGNFLVSKDP-PHRPILLDFGLTKKLSS 320 (977)
Q Consensus 280 ~~i~~~G~~H~D~hPgNIlv~~~~-~g~i~LiDFG~~~~l~~ 320 (977)
..+|..|++|+|+||.|||++.++ ++.++|+|||++..+..
T Consensus 142 ~~lH~~~ivH~Dlkp~NIll~~~~~~~~~kl~DfG~a~~~~~ 183 (362)
T 2bdw_A 142 AYCHSNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVND 183 (362)
T ss_dssp HHHHHTTCBCCCCSGGGEEESCSSTTCCEEECCCTTCBCCTT
T ss_pred HHHHHCCeEeccCchHHEEEecCCCCCCEEEeecCcceEecC
Confidence 889999999999999999998542 25699999999987653
|
| >2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A* | Back alignment and structure |
|---|
Probab=99.34 E-value=5.4e-13 Score=151.23 Aligned_cols=148 Identities=18% Similarity=0.210 Sum_probs=97.2
Q ss_pred cccccccccEEEEEEec-CCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCcHHHH
Q 002031 124 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (977)
Q Consensus 124 ~piasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea 202 (977)
+.||+|++|.||+|+.+ +|+.||||+.+.........+ ... -.+.+|.
T Consensus 18 ~~LG~G~fg~V~~~~~~~~~~~~avK~i~~~~~~~~~~~---------------------~~~----------~~~~~E~ 66 (361)
T 2yab_A 18 EELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRG---------------------VCR----------EEIEREV 66 (361)
T ss_dssp EEEEEETTEEEEEEEETTTCCEEEEEEEEBCSSTTCSSS---------------------BCH----------HHHHHHH
T ss_pred eEEeeCcCEEEEEEEECCCCCEEEEEEEEccccccccch---------------------hHH----------HHHHHHH
Confidence 57999999999999985 799999999865432110000 000 0233454
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeee-cCCceEEeeccCCCCCCChHHHHhcCCCHHHHHHHHHHHH--H
Q 002031 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--A 279 (977)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~--l 279 (977)
..+..+.+ ..-+.+-.++. ....+|||||++|.+|.++.. ....++...+...+.+++ +
T Consensus 67 ~il~~l~h-----------------pnIv~l~~~~~~~~~~~lv~e~~~gg~L~~~l~-~~~~l~~~~~~~i~~qi~~aL 128 (361)
T 2yab_A 67 SILRQVLH-----------------PNIITLHDVYENRTDVVLILELVSGGELFDFLA-QKESLSEEEATSFIKQILDGV 128 (361)
T ss_dssp HHHTTCCC-----------------TTBCCEEEEEECSSEEEEEEECCCSCBHHHHHT-TCSCCBHHHHHHHHHHHHHHH
T ss_pred HHHHhCCC-----------------cCCCcEEEEEEeCCEEEEEEEcCCCCcHHHHHH-hcCCCCHHHHHHHHHHHHHHH
Confidence 44433321 11122222333 455689999999999887642 123355666665555554 8
Q ss_pred HHHHhcCccccCCCCCCeEEccCC--CCceEEEecccccccCH
Q 002031 280 HQIYVDGFFNGDPHPGNFLVSKDP--PHRPILLDFGLTKKLSS 320 (977)
Q Consensus 280 ~~i~~~G~~H~D~hPgNIlv~~~~--~g~i~LiDFG~~~~l~~ 320 (977)
..+|..|++|+|+||+|||++.++ ...++|+|||++..+..
T Consensus 129 ~~LH~~givHrDlkp~NIll~~~~~~~~~vkl~DFG~a~~~~~ 171 (361)
T 2yab_A 129 NYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIED 171 (361)
T ss_dssp HHHHHTTEECCCCSGGGEEESCTTSSSCCEEECCCSSCEECCT
T ss_pred HHHHHCCcccCCCCHHHEEEeCCCCCccCEEEEecCCceEcCC
Confidence 889999999999999999998652 12799999999987754
|
| >4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.34 E-value=1.4e-12 Score=143.98 Aligned_cols=142 Identities=19% Similarity=0.195 Sum_probs=96.1
Q ss_pred cccccccccEEEEEEec-CCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCcHHHH
Q 002031 124 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (977)
Q Consensus 124 ~piasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea 202 (977)
+.||+|++|.||+|+.+ +|+.||||+.......... .+ .+.+|+
T Consensus 9 ~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~-----------------------------~~------~~~~E~ 53 (311)
T 4agu_A 9 GKIGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVI-----------------------------KK------IALREI 53 (311)
T ss_dssp EEEEECSSEEEEEEEETTTCCEEEEEEECCCCC-HHH-----------------------------HH------HHHHHH
T ss_pred eEEeecCCeEEEEEEeCCCCcEEEEEEeeccccchHH-----------------------------HH------HHHHHH
Confidence 57999999999999985 6999999987543221100 00 123455
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeee-cCCceEEeeccCCCCCCChHHHHhcCCCHHHHHHHHHHHH--H
Q 002031 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--A 279 (977)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~--l 279 (977)
+.+.++.+ ..-+.+-.++. ....++||||++|.++.++.. ....++...+...+.+++ +
T Consensus 54 ~~l~~l~h-----------------~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~-~~~~~~~~~~~~i~~~l~~~l 115 (311)
T 4agu_A 54 RMLKQLKH-----------------PNLVNLLEVFRRKRRLHLVFEYCDHTVLHELDR-YQRGVPEHLVKSITWQTLQAV 115 (311)
T ss_dssp HHHHHCCC-----------------TTBCCEEEEEEETTEEEEEEECCSEEHHHHHHH-TSSCCCHHHHHHHHHHHHHHH
T ss_pred HHHHhCCC-----------------CCccchhheeecCCeEEEEEEeCCCchHHHHHh-hhcCCCHHHHHHHHHHHHHHH
Confidence 55554421 01122222222 455689999999988776532 123455555555554544 8
Q ss_pred HHHHhcCccccCCCCCCeEEccCCCCceEEEecccccccCH
Q 002031 280 HQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 320 (977)
Q Consensus 280 ~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 320 (977)
..+|..|++|+|+||+||+++.+ +.++|+|||++..+..
T Consensus 116 ~~lH~~~ivH~dlkp~Nil~~~~--~~~kl~Dfg~~~~~~~ 154 (311)
T 4agu_A 116 NFCHKHNCIHRDVKPENILITKH--SVIKLCDFGFARLLTG 154 (311)
T ss_dssp HHHHHTTEECCCCSGGGEEECTT--SCEEECCCTTCEECC-
T ss_pred HHHHHCCCcCCCCChhhEEEcCC--CCEEEeeCCCchhccC
Confidence 88999999999999999999865 8999999999988764
|
| >3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.34 E-value=6.6e-13 Score=144.02 Aligned_cols=155 Identities=19% Similarity=0.212 Sum_probs=101.8
Q ss_pred HHhCCChhhcccccCccccccccccEEEEEEe-cCCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHH
Q 002031 108 REFGESMGGMFMDFVETPLATASIAQVHRATL-VDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIID 186 (977)
Q Consensus 108 ~elg~~~~~~f~~~d~~piasaSigqV~~A~l-~~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~ 186 (977)
..+|..+.+ |.. .+.||+|++|.||+|+. .+|+.||||+..+..... .+ ..
T Consensus 4 ~~~g~~~~~-y~~--~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~--~~----------------------~~- 55 (278)
T 3cok_A 4 TCIGEKIED-FKV--GNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYK--AG----------------------MV- 55 (278)
T ss_dssp HHHCSSGGG-EEE--EEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHH--TT----------------------CH-
T ss_pred ccccccccc-cee--eeeecCCCceEEEEEEEccCCceEEEEEeehhhhhh--hh----------------------HH-
Confidence 345655544 222 36899999999999997 589999999875421100 00 00
Q ss_pred HHhhhcccccCcHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceee---e-cCCceEEeeccCCCCCCChHHHHh
Q 002031 187 EWCKEAPKELDFNSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVI---Q-SSETVLILEFMDGIRLNDCESLEA 262 (977)
Q Consensus 187 e~~~~l~~Eld~~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~---~-~~~~vLVmE~i~G~~L~~~~~~~~ 262 (977)
-.+.+|++.+.++.+ ..|++++ . ....++||||++|.+|.++.....
T Consensus 56 ---------~~~~~e~~~l~~l~h--------------------~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~ 106 (278)
T 3cok_A 56 ---------QRVQNEVKIHCQLKH--------------------PSILELYNYFEDSNYVYLVLEMCHNGEMNRYLKNRV 106 (278)
T ss_dssp ---------HHHHHHHHHHTTBCC--------------------TTBCCEEEEEECSSEEEEEEECCTTEEHHHHHHTCS
T ss_pred ---------HHHHHHHHHHHhCCC--------------------CCeEeEEEEEccCCeEEEEEecCCCCcHHHHHhhcc
Confidence 013344444333211 1233333 2 455689999999998877643222
Q ss_pred cCCCHHHHHHHHHHHH--HHHHHhcCccccCCCCCCeEEccCCCCceEEEecccccccCHH
Q 002031 263 FGVNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSSS 321 (977)
Q Consensus 263 ~~~~~~~l~~~l~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~~ 321 (977)
..++...+...+.+++ +..+|..|++|+|+||.||+++.+ ++++|+|||++..+...
T Consensus 107 ~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~Nili~~~--~~~kl~dfg~~~~~~~~ 165 (278)
T 3cok_A 107 KPFSENEARHFMHQIITGMLYLHSHGILHRDLTLSNLLLTRN--MNIKIADFGLATQLKMP 165 (278)
T ss_dssp SCCCHHHHHHHHHHHHHHHHHHHHTTEECSSCCGGGEEECTT--CCEEECCCTTCEECC--
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEcCC--CCEEEEeecceeeccCC
Confidence 3456666666555554 888999999999999999999865 89999999999887643
|
| >1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ... | Back alignment and structure |
|---|
Probab=99.34 E-value=9.9e-13 Score=145.85 Aligned_cols=140 Identities=16% Similarity=0.205 Sum_probs=95.7
Q ss_pred ccccccccccEEEEEEec------CCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhccccc
Q 002031 123 ETPLATASIAQVHRATLV------DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKEL 196 (977)
Q Consensus 123 ~~piasaSigqV~~A~l~------~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~El 196 (977)
.+.||.|++|.||+|+.+ +++.||||+.+....... +.
T Consensus 30 ~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vaiK~~~~~~~~~~------------------------------------~~ 73 (322)
T 1p4o_A 30 SRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRE------------------------------------RI 73 (322)
T ss_dssp EEEEEECSSSEEEEEEEEEEETTEEEEEEEEEECCTTSCHHH------------------------------------HH
T ss_pred eeEeccCCceEEEeeeecCccCCCCceEEEEEecccccCHHH------------------------------------HH
Confidence 368999999999999864 478899998764321110 01
Q ss_pred CcHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceee---e-cCCceEEeeccCCCCCCChHHHHh---------c
Q 002031 197 DFNSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVI---Q-SSETVLILEFMDGIRLNDCESLEA---------F 263 (977)
Q Consensus 197 d~~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~---~-~~~~vLVmE~i~G~~L~~~~~~~~---------~ 263 (977)
.+.+|++.+..+.+ + .|.+++ . ....++||||++|.+|.++..... .
T Consensus 74 ~~~~E~~~l~~l~h------------------~--~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~ 133 (322)
T 1p4o_A 74 EFLNEASVMKEFNC------------------H--HVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLA 133 (322)
T ss_dssp HHHHHHHHGGGCCC------------------T--TBCCEEEEECSSSSCEEEEECCTTCBHHHHHHHHHHHHHHCTTCC
T ss_pred HHHHHHHHHHhcCC------------------C--CEeeeEEEEccCCccEEEEEeCCCCcHHHHHHHhchhhccCCCCC
Confidence 23345444433321 1 233333 2 456789999999999988754221 2
Q ss_pred CCCHHHHHHHHHHHH--HHHHHhcCccccCCCCCCeEEccCCCCceEEEecccccccCH
Q 002031 264 GVNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 320 (977)
Q Consensus 264 ~~~~~~l~~~l~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 320 (977)
..+...+...+.+++ +..+|..|++|+|+||.||+++.+ ++++|+|||++..+..
T Consensus 134 ~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dikp~NIli~~~--~~~kl~Dfg~~~~~~~ 190 (322)
T 1p4o_A 134 PPSLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAED--FTVKIGDFGMTRDIYE 190 (322)
T ss_dssp CCCHHHHHHHHHHHHHHHHHHHHTTCBCSCCSGGGEEECTT--CCEEECCTTCCCGGGG
T ss_pred CcCHHHHHHHHHHHHHHHHHHHHCCCccCCCccceEEEcCC--CeEEECcCcccccccc
Confidence 235555555555544 888999999999999999999865 8999999999876543
|
| >2v62_A Serine/threonine-protein kinase VRK2; transferase, ATP-binding, membrane, nucleotide-binding, TRAN; 1.7A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.33 E-value=6e-13 Score=149.59 Aligned_cols=150 Identities=19% Similarity=0.241 Sum_probs=94.2
Q ss_pred ccccccccccEEEEEEec----CCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCc
Q 002031 123 ETPLATASIAQVHRATLV----DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDF 198 (977)
Q Consensus 123 ~~piasaSigqV~~A~l~----~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~ 198 (977)
.+.||+|++|.||+|+.. +++.||||+...... ....+..+++.+. .-++
T Consensus 42 ~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~-~~~~e~~~~~~~~-------------------------~~~~ 95 (345)
T 2v62_A 42 GKKIGSGGFGLIYLAFPTNKPEKDARHVVKVEYQENG-PLFSELKFYQRVA-------------------------KKDC 95 (345)
T ss_dssp EEEC------CEEEEEESSSCGGGCCEEEEEEECC-C-HHHHHHHHHHHHC-------------------------CHHH
T ss_pred EeeEeecCCeEEEEEEecCCCCccceEEEEeeecCCc-chHHHHHHHHHHh-------------------------hhHH
Confidence 368999999999999985 688999999876532 2223333322221 1123
Q ss_pred HHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeee--------cCCceEEeeccCCCCCCChHHHHhcCCCHHHH
Q 002031 199 NSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ--------SSETVLILEFMDGIRLNDCESLEAFGVNKQKV 270 (977)
Q Consensus 199 ~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~--------~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l 270 (977)
.+|...+..+. ...|++++. ....+|||||+ |.+|.++.... ..++...+
T Consensus 96 ~~e~~~~~~l~--------------------h~ni~~~~~~~~~~~~~~~~~~lv~e~~-~~~L~~~l~~~-~~~~~~~~ 153 (345)
T 2v62_A 96 IKKWIERKQLD--------------------YLGIPLFYGSGLTEFKGRSYRFMVMERL-GIDLQKISGQN-GTFKKSTV 153 (345)
T ss_dssp HHHHHHHHTCS--------------------CCCCCCEEEEEEEESSSCEEEEEEEECE-EEEHHHHCBGG-GBCCHHHH
T ss_pred HHHHHhhcccc--------------------ccCcceeecccccccCCCcEEEEEEecc-CCCHHHHHHhc-CCCCHHHH
Confidence 33443333221 122344432 23458999999 88888764322 24666666
Q ss_pred HHHHHHHH--HHHHHhcCccccCCCCCCeEEccCCCCceEEEecccccccCH
Q 002031 271 VEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 320 (977)
Q Consensus 271 ~~~l~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 320 (977)
...+.+++ +..+|..|++|+|+||.|||++.++.+.++|+|||++..+..
T Consensus 154 ~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~~~kL~Dfg~a~~~~~ 205 (345)
T 2v62_A 154 LQLGIRMLDVLEYIHENEYVHGDIKAANLLLGYKNPDQVYLADYGLSYRYCP 205 (345)
T ss_dssp HHHHHHHHHHHHHHHHTTEECSCCSGGGEEEESSSTTSEEECCCTTCEESSG
T ss_pred HHHHHHHHHHHHHHHhCCeeCCCcCHHHEEEccCCCCcEEEEeCCCceeccc
Confidence 66666655 888999999999999999999876334999999999987653
|
| >3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=99.33 E-value=2e-12 Score=144.10 Aligned_cols=78 Identities=18% Similarity=0.254 Sum_probs=62.4
Q ss_pred CCceEEeeccCCCCCCChHHHHhcCCCHHHHHHHHHHHH--HHHHHhc--------CccccCCCCCCeEEccCCCCceEE
Q 002031 240 SETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--AHQIYVD--------GFFNGDPHPGNFLVSKDPPHRPIL 309 (977)
Q Consensus 240 ~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~--l~~i~~~--------G~~H~D~hPgNIlv~~~~~g~i~L 309 (977)
...+|||||++|.+|.++. ....++...+...+.+++ +..+|.. |++|+|+||.|||++.+ +.++|
T Consensus 108 ~~~~lv~e~~~~g~L~~~l--~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dikp~Nill~~~--~~~kl 183 (337)
T 3mdy_A 108 TQLYLITDYHENGSLYDYL--KSTTLDAKSMLKLAYSSVSGLCHLHTEIFSTQGKPAIAHRDLKSKNILVKKN--GTCCI 183 (337)
T ss_dssp CEEEEEECCCTTCBHHHHH--HHCCBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBCCEECSCCCGGGEEECTT--SCEEE
T ss_pred CceEEEEeccCCCcHHHHh--hccCCCHHHHHHHHHHHHHHHHHHHHhhhhhccCCCEEecccchHHEEECCC--CCEEE
Confidence 4568999999999998874 445667666666666654 7888988 99999999999999865 89999
Q ss_pred EecccccccCHH
Q 002031 310 LDFGLTKKLSSS 321 (977)
Q Consensus 310 iDFG~~~~l~~~ 321 (977)
+|||++..+...
T Consensus 184 ~Dfg~a~~~~~~ 195 (337)
T 3mdy_A 184 ADLGLAVKFISD 195 (337)
T ss_dssp CCCTTCEECC--
T ss_pred EeCCCceeeccc
Confidence 999999877653
|
| >3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vhk_A* 3vid_A* 3hng_A* | Back alignment and structure |
|---|
Probab=99.33 E-value=9.8e-13 Score=148.23 Aligned_cols=53 Identities=15% Similarity=0.202 Sum_probs=42.0
Q ss_pred CCHHHHHHHHHHHH--HHHHHhcCccccCCCCCCeEEccCCCCceEEEecccccccC
Q 002031 265 VNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 319 (977)
Q Consensus 265 ~~~~~l~~~l~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~ 319 (977)
++...+...+.+++ +..+|..|++|+|+||.|||++.+ +.++|+|||++..+.
T Consensus 190 l~~~~~~~~~~ql~~aL~~LH~~~ivH~Dikp~NIll~~~--~~~kl~Dfg~a~~~~ 244 (359)
T 3vhe_A 190 LTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEK--NVVKICDFGLARDIY 244 (359)
T ss_dssp BCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECGG--GCEEECCCGGGSCTT
T ss_pred cCHHHHHHHHHHHHHHHHHHHHCCcccCCCChhhEEEcCC--CcEEEEeccceeeec
Confidence 34444555444444 888999999999999999999865 899999999997653
|
| >3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 4deg_A* 4deh_A* 4dei_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 4aoi_A* 4ap7_A* 3q6w_A* ... | Back alignment and structure |
|---|
Probab=99.33 E-value=1.8e-12 Score=142.09 Aligned_cols=80 Identities=14% Similarity=0.214 Sum_probs=62.7
Q ss_pred cCCceEEeeccCCCCCCChHHHHhcCCCHHHHHHHHHHHH--HHHHHhcCccccCCCCCCeEEccCCCCceEEEeccccc
Q 002031 239 SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTK 316 (977)
Q Consensus 239 ~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~ 316 (977)
....++||||++|.+|.++........+...+...+.+++ +..+|..|++|+|+||.||+++.+ +.++|+|||++.
T Consensus 99 ~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~ql~~~l~~lH~~~i~H~dikp~Nil~~~~--~~~kl~Dfg~a~ 176 (298)
T 3f66_A 99 EGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASKKFVHRDLAARNCMLDEK--FTVKVADFGLAR 176 (298)
T ss_dssp SSCCEEEEECCTTCBHHHHHHCTTCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECTT--CCEEECSCGGGC
T ss_pred CCceEEEEeCCCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCCccCCCCchheEEECCC--CCEEECcccccc
Confidence 3456899999999999877533333456666655555544 888999999999999999999855 899999999998
Q ss_pred ccCH
Q 002031 317 KLSS 320 (977)
Q Consensus 317 ~l~~ 320 (977)
.+..
T Consensus 177 ~~~~ 180 (298)
T 3f66_A 177 DMYD 180 (298)
T ss_dssp CCSC
T ss_pred cccc
Confidence 7654
|
| >1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=99.33 E-value=6.8e-13 Score=149.22 Aligned_cols=144 Identities=17% Similarity=0.173 Sum_probs=90.2
Q ss_pred cccccccccEEEEEEec-CCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCcHHHH
Q 002031 124 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (977)
Q Consensus 124 ~piasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea 202 (977)
+.||.|++|.||+|+.+ +|+.||||+.+........ +. ..-.+.+|+
T Consensus 16 ~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~--------------------------~~------~~~~~~~E~ 63 (346)
T 1ua2_A 16 DFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAK--------------------------DG------INRTALREI 63 (346)
T ss_dssp EEEEEETTEEEEEEECSSCCSEEEEEEC--------------------------------------------CTHHHHHH
T ss_pred eEEeecCCEEEEEEEECCCCcEEEEEEEecCCcchhh--------------------------hh------hhHHHHHHH
Confidence 67999999999999975 7999999987653221100 00 011244566
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeee-cCCceEEeeccCCCCCCChHHHHhcCCCHHHHHHHHHHHH--H
Q 002031 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--A 279 (977)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~--l 279 (977)
+.+.++.+ ..-+.+-.++. ....++||||++| ++.+........++...+...+.+++ +
T Consensus 64 ~~l~~l~h-----------------~~iv~~~~~~~~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~qi~~~l 125 (346)
T 1ua2_A 64 KLLQELSH-----------------PNIIGLLDAFGHKSNISLVFDFMET-DLEVIIKDNSLVLTPSHIKAYMLMTLQGL 125 (346)
T ss_dssp HHHHHCCC-----------------TTBCCEEEEECCTTCCEEEEECCSE-EHHHHHTTCCSSCCSSHHHHHHHHHHHHH
T ss_pred HHHhhCCC-----------------CCCCeEEEEEeeCCceEEEEEcCCC-CHHHHHHhcCcCCCHHHHHHHHHHHHHHH
Confidence 55554421 01122222222 4667899999997 55443221111234444444444433 8
Q ss_pred HHHHhcCccccCCCCCCeEEccCCCCceEEEecccccccC
Q 002031 280 HQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 319 (977)
Q Consensus 280 ~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~ 319 (977)
..+|..|++|+|+||+||+++.+ +.++|+|||++..+.
T Consensus 126 ~~lH~~~ivH~Dlkp~Nil~~~~--~~~kl~Dfg~a~~~~ 163 (346)
T 1ua2_A 126 EYLHQHWILHRDLKPNNLLLDEN--GVLKLADFGLAKSFG 163 (346)
T ss_dssp HHHHHTTCCCCCCCGGGEEECTT--CCEEECCCGGGSTTT
T ss_pred HHHHHCCEECCCCCHHHEEEcCC--CCEEEEecccceecc
Confidence 88999999999999999999865 899999999998763
|
| >3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} SCOP: d.144.1.7 PDB: 4fk3_A* 3c4c_A* 3c4d_A* 3idp_A* 4g9r_A* 3ii5_A* 4e26_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 3d4q_A* 4e4x_A* 4g9c_A* ... | Back alignment and structure |
|---|
Probab=99.33 E-value=9.5e-13 Score=143.92 Aligned_cols=138 Identities=17% Similarity=0.224 Sum_probs=88.0
Q ss_pred cccccccccEEEEEEecCCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCcHHHHH
Q 002031 124 TPLATASIAQVHRATLVDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEAE 203 (977)
Q Consensus 124 ~piasaSigqV~~A~l~~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea~ 203 (977)
+.||+|++|.||+|+.. ..||||+.+......- +.+ .|.+|++
T Consensus 30 ~~lG~G~~g~Vy~~~~~--~~vavK~~~~~~~~~~--~~~---------------------------------~~~~E~~ 72 (289)
T 3og7_A 30 QRIGSGSFGTVYKGKWH--GDVAVKMLNVTAPTPQ--QLQ---------------------------------AFKNEVG 72 (289)
T ss_dssp EEEEECSSEEEEEEESS--SEEEEEEESCSSCCHH--HHH---------------------------------HHHHHHH
T ss_pred eEecCCCCeEEEEEEEc--CceEEEEEeccCCCHH--HHH---------------------------------HHHHHHH
Confidence 68999999999999863 4699999865432110 000 1334444
Q ss_pred HHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeee---cCCceEEeeccCCCCCCChHHHHhcCCCHHHHHHHHHHHH--
Q 002031 204 NTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ---SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY-- 278 (977)
Q Consensus 204 n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~---~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~-- 278 (977)
.+.++.+ + .|..++. ....++||||++|.+|.+........++...+...+.+++
T Consensus 73 ~l~~l~h------------------~--~iv~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~ 132 (289)
T 3og7_A 73 VLRKTRH------------------V--NILLFMGYSTAPQLAIVTQWCEGSSLYHHLHASETKFEMKKLIDIARQTARG 132 (289)
T ss_dssp HHTTCCC------------------T--TBCCEEEEECSSSCEEEEECCCEEEHHHHHTTC---CCHHHHHHHHHHHHHH
T ss_pred HHHhCCC------------------C--cEEEEEeeccCCccEEEEEecCCCcHHHHHhhccCCCCHHHHHHHHHHHHHH
Confidence 4333221 1 1222322 4567899999999988766432333456566555555544
Q ss_pred HHHHHhcCccccCCCCCCeEEccCCCCceEEEecccccccCH
Q 002031 279 AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 320 (977)
Q Consensus 279 l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 320 (977)
+..+|..|++|+|+||.||+++.+ ++++|+|||++...+.
T Consensus 133 L~~lH~~~i~H~Dlkp~Nil~~~~--~~~kl~Dfg~~~~~~~ 172 (289)
T 3og7_A 133 MDYLHAKSIIHRDLKSNNIFLHED--NTVKIGDFGLATEKSR 172 (289)
T ss_dssp HHHHHHTTCCCSCCCGGGEEEETT--TEEEECCCC-------
T ss_pred HHHHHhCCcccccCccceEEECCC--CCEEEccceecccccc
Confidence 888999999999999999999965 8999999999876543
|
| >1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A* | Back alignment and structure |
|---|
Probab=99.33 E-value=1.1e-12 Score=143.47 Aligned_cols=143 Identities=18% Similarity=0.245 Sum_probs=95.9
Q ss_pred ccccccccccEEEEEEe---cCCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCcH
Q 002031 123 ETPLATASIAQVHRATL---VDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFN 199 (977)
Q Consensus 123 ~~piasaSigqV~~A~l---~~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~ 199 (977)
.+.||+|++|.||+|+. .+++.||||+.+....... ..+ .+.
T Consensus 22 ~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~-------------------------~~~----------~~~ 66 (291)
T 1xbb_A 22 DKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPA-------------------------LKD----------ELL 66 (291)
T ss_dssp EEEEEECSSEEEEEEEEECSSSEEEEEEEEEC-----CH-------------------------HHH----------HHH
T ss_pred cCccccccCeeeEeeeecCCCceeeEEEEeecccccCHH-------------------------HHH----------HHH
Confidence 34899999999999964 3578999999865321100 000 233
Q ss_pred HHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeeecCCceEEeeccCCCCCCChHHHHhcCCCHHHHHHHHHHHH-
Q 002031 200 SEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQSSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY- 278 (977)
Q Consensus 200 ~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~- 278 (977)
+|++.+..+.+ ..-+.+-.++.....++||||++|.+|.++... ...++...+...+.+++
T Consensus 67 ~e~~~l~~l~h-----------------~~i~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~-~~~~~~~~~~~i~~qi~~ 128 (291)
T 1xbb_A 67 AEANVMQQLDN-----------------PYIVRMIGICEAESWMLVMEMAELGPLNKYLQQ-NRHVKDKNIIELVHQVSM 128 (291)
T ss_dssp HHHHHHHTCCC-----------------TTBCCEEEEEESSSEEEEEECCTTEEHHHHHHH-CTTCCHHHHHHHHHHHHH
T ss_pred HHHHHHHhCCC-----------------CCEEEEEEEECCCCcEEEEEeCCCCCHHHHHHh-CcCCCHHHHHHHHHHHHH
Confidence 45554444321 011122222235667899999999999877432 23356666666555554
Q ss_pred -HHHHHhcCccccCCCCCCeEEccCCCCceEEEecccccccCH
Q 002031 279 -AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 320 (977)
Q Consensus 279 -l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 320 (977)
+..+|..|++|+|+||.||+++.+ +.++|+|||++..+..
T Consensus 129 ~l~~LH~~~i~H~dikp~Nil~~~~--~~~kl~Dfg~~~~~~~ 169 (291)
T 1xbb_A 129 GMKYLEESNFVHRDLAARNVLLVTQ--HYAKISDFGLSKALRA 169 (291)
T ss_dssp HHHHHHHTTEECSCCSGGGEEEEET--TEEEECCCTTCEECCT
T ss_pred HHHHHHhCCeEcCCCCcceEEEeCC--CcEEEccCCcceeecc
Confidence 888999999999999999999966 8999999999987643
|
| >2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A* | Back alignment and structure |
|---|
Probab=99.33 E-value=1.4e-12 Score=143.92 Aligned_cols=138 Identities=17% Similarity=0.177 Sum_probs=94.8
Q ss_pred cccccccccEEEEEEe------cCCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccC
Q 002031 124 TPLATASIAQVHRATL------VDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELD 197 (977)
Q Consensus 124 ~piasaSigqV~~A~l------~~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld 197 (977)
+.||+|++|.||+|+. .+|+.||||+.+....... .+ +
T Consensus 29 ~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~---~~---------------------------------~ 72 (314)
T 2ivs_A 29 KTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSE---LR---------------------------------D 72 (314)
T ss_dssp EEEEECSSSEEEEEEEETGGGCSSEEEEEEEECCTTCCHHH---HH---------------------------------H
T ss_pred eeecccCCeeEEEEEEeccCcccCcceEEEEeccCCCCHHH---HH---------------------------------H
Confidence 6799999999999986 2468999999875432110 00 1
Q ss_pred cHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeee----cCCceEEeeccCCCCCCChHHHHh-----------
Q 002031 198 FNSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ----SSETVLILEFMDGIRLNDCESLEA----------- 262 (977)
Q Consensus 198 ~~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~----~~~~vLVmE~i~G~~L~~~~~~~~----------- 262 (977)
+.+|++.+.++.+ -.|.+++. ....++||||++|.+|.++.....
T Consensus 73 ~~~E~~~l~~l~h--------------------p~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~ 132 (314)
T 2ivs_A 73 LLSEFNVLKQVNH--------------------PHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGG 132 (314)
T ss_dssp HHHHHHHHTTCCC--------------------TTBCCEEEEECSSSSCEEEEECCTTCBHHHHHHHTTTSTTEEC----
T ss_pred HHHHHHHHhhCCC--------------------CceeeEEEEEecCCceEEEEeecCCCCHHHHHHHHhhccCCcccccc
Confidence 3345444443311 12333332 456789999999999987754211
Q ss_pred ------------cCCCHHHHHHHHHHHH--HHHHHhcCccccCCCCCCeEEccCCCCceEEEecccccccC
Q 002031 263 ------------FGVNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 319 (977)
Q Consensus 263 ------------~~~~~~~l~~~l~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~ 319 (977)
..++...+...+.+++ +..+|..|++|+|+||.||+++.+ ++++|+|||++..+.
T Consensus 133 ~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~NIli~~~--~~~kl~Dfg~~~~~~ 201 (314)
T 2ivs_A 133 SRNSSSLDHPDERALTMGDLISFAWQISQGMQYLAEMKLVHRDLAARNILVAEG--RKMKISDFGLSRDVY 201 (314)
T ss_dssp ------------CEECHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEETT--TEEEECCCTTCEECT
T ss_pred cccccccccccccCcCHHHHHHHHHHHHHHHHHHHHCCCcccccchheEEEcCC--CCEEEcccccccccc
Confidence 1144555555555544 888999999999999999999965 899999999987664
|
| >3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.33 E-value=2.1e-12 Score=142.37 Aligned_cols=147 Identities=18% Similarity=0.152 Sum_probs=93.6
Q ss_pred cccccccccEEEEEEe-cCCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCcHHHH
Q 002031 124 TPLATASIAQVHRATL-VDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (977)
Q Consensus 124 ~piasaSigqV~~A~l-~~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea 202 (977)
+.||+|++|.||+|+. .+|+.||||+.+......... ....++.+|.
T Consensus 15 ~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~--------------------------------~~~~~~~~e~ 62 (308)
T 3g33_A 15 AEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGG--------------------------------GLPISTVREV 62 (308)
T ss_dssp EEECCSSSCCEEEEECTTTCCEEEEEEEEEECCCTTSS--------------------------------CCCHHHHHHH
T ss_pred EEEecCCCeEEEEEEECCCCcEEEEEEEeccccccccc--------------------------------ccchhHHHHH
Confidence 5799999999999997 589999999875321100000 0011233455
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeeecC------CceEEeeccCCCCCCChHHHHh-cCCCHHHHHHHHH
Q 002031 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQSS------ETVLILEFMDGIRLNDCESLEA-FGVNKQKVVEEIT 275 (977)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~~~------~~vLVmE~i~G~~L~~~~~~~~-~~~~~~~l~~~l~ 275 (977)
+.+.++... .+ ..-+.+-.++... ..++||||++| +|.++..... ..++...+...+.
T Consensus 63 ~~l~~l~~~-~h-------------~niv~~~~~~~~~~~~~~~~~~lv~e~~~~-~L~~~~~~~~~~~~~~~~~~~i~~ 127 (308)
T 3g33_A 63 ALLRRLEAF-EH-------------PNVVRLMDVCATSRTDREIKVTLVFEHVDQ-DLRTYLDKAPPPGLPAETIKDLMR 127 (308)
T ss_dssp HHHHHHHHH-CC-------------TTBCCEEEEEEECCSSSEEEEEEEEECCCC-BHHHHHHTCCTTCSCHHHHHHHHH
T ss_pred HHHHHHhhc-CC-------------CCeEEeeeeeeccCCCCceeEEEEehhhhc-CHHHHHhhccCCCCCHHHHHHHHH
Confidence 555555431 10 1112222333221 24899999986 6655432111 1256666665555
Q ss_pred HHH--HHHHHhcCccccCCCCCCeEEccCCCCceEEEecccccccC
Q 002031 276 RAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 319 (977)
Q Consensus 276 ~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~ 319 (977)
+++ +..+|..|++|+|+||+|||++.+ ++++|+|||++..++
T Consensus 128 qi~~al~~lH~~~ivH~Dlkp~Nil~~~~--~~~kl~Dfg~a~~~~ 171 (308)
T 3g33_A 128 QFLRGLDFLHANCIVHRDLKPENILVTSG--GTVKLADFGLARIYS 171 (308)
T ss_dssp HHHHHHHHHHHTTCCCSCCCTTTEEECTT--SCEEECSCSCTTTST
T ss_pred HHHHHHHHHHHCCcccCCCCHHHEEEcCC--CCEEEeeCccccccC
Confidence 554 889999999999999999999865 899999999997664
|
| >3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A* | Back alignment and structure |
|---|
Probab=99.33 E-value=1.5e-12 Score=145.28 Aligned_cols=148 Identities=20% Similarity=0.238 Sum_probs=97.4
Q ss_pred ccccccccccEEEEEEec-CCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCcHHH
Q 002031 123 ETPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSE 201 (977)
Q Consensus 123 ~~piasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~E 201 (977)
.+.||.|++|.||+|+.+ +|+.||||+.+......- ....+.+|
T Consensus 34 ~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~-----------------------------------~~~~~~~e 78 (327)
T 3lm5_A 34 SKELGRGKFAVVRQCISKSTGQEYAAKFLKKRRRGQD-----------------------------------CRAEILHE 78 (327)
T ss_dssp EEEEEEETTEEEEEEEETTTCCEEEEEEEESEETTEE-----------------------------------CHHHHHHH
T ss_pred cceeCCCCCeEEEEEEECCCCCEEEEEEEehhhcchH-----------------------------------HHHHHHHH
Confidence 368999999999999975 799999998764322110 00123345
Q ss_pred HHHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeee-cCCceEEeeccCCCCCCChHHHH-hcCCCHHHHHHHHHHHH-
Q 002031 202 AENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLE-AFGVNKQKVVEEITRAY- 278 (977)
Q Consensus 202 a~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLVmE~i~G~~L~~~~~~~-~~~~~~~~l~~~l~~~~- 278 (977)
...+.++.+. ...+.+-.++. ....+|||||++|.+|.++.... ...++...+...+.+++
T Consensus 79 ~~~l~~l~~~----------------~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~i~~ql~~ 142 (327)
T 3lm5_A 79 IAVLELAKSC----------------PRVINLHEVYENTSEIILILEYAAGGEIFSLCLPELAEMVSENDVIRLIKQILE 142 (327)
T ss_dssp HHHHHHTTTC----------------TTBCCEEEEEECSSEEEEEEECCTTEEGGGGGSSCC-CCCCHHHHHHHHHHHHH
T ss_pred HHHHHhccCC----------------CCEEEEEEEEEeCCeEEEEEEecCCCcHHHHHHHhcccCCCHHHHHHHHHHHHH
Confidence 5554443220 01112222222 45568999999999988764211 13355666666555554
Q ss_pred -HHHHHhcCccccCCCCCCeEEccC-CCCceEEEecccccccCHH
Q 002031 279 -AHQIYVDGFFNGDPHPGNFLVSKD-PPHRPILLDFGLTKKLSSS 321 (977)
Q Consensus 279 -l~~i~~~G~~H~D~hPgNIlv~~~-~~g~i~LiDFG~~~~l~~~ 321 (977)
+..+|..|++|+|+||.||+++.. +++.++|+|||++..+...
T Consensus 143 ~L~~LH~~givH~Dikp~NIl~~~~~~~~~~kL~Dfg~a~~~~~~ 187 (327)
T 3lm5_A 143 GVYYLHQNNIVHLDLKPQNILLSSIYPLGDIKIVDFGMSRKIGHA 187 (327)
T ss_dssp HHHHHHHTTEECSCCCGGGEEESCBTTBCCEEECCGGGCEEC---
T ss_pred HHHHHHHCCeecCcCChHHEEEecCCCCCcEEEeeCccccccCCc
Confidence 888999999999999999999852 1478999999999887543
|
| >4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} PDB: 4bbm_A* | Back alignment and structure |
|---|
Probab=99.33 E-value=1.5e-12 Score=145.39 Aligned_cols=142 Identities=23% Similarity=0.212 Sum_probs=94.2
Q ss_pred cccccccccEEEEEEec-CCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCcHHHH
Q 002031 124 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (977)
Q Consensus 124 ~piasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea 202 (977)
+.||+|++|.||+|+.. +|+.||||+........... -.+.+|+
T Consensus 31 ~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~-----------------------------------~~~~~E~ 75 (331)
T 4aaa_A 31 GLVGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVK-----------------------------------KIAMREI 75 (331)
T ss_dssp EEGGGGTTSSEEEEEETTTCCEEEEEEEESCSSCHHHH-----------------------------------HHHHHHH
T ss_pred eEEeecCCEEEEEEEECCCCceEEEEEEecCCCchHHH-----------------------------------HHHHHHH
Confidence 68999999999999985 69999999875432211000 0123455
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeee-cCCceEEeeccCCCCCCChHHHHhcCCCHHHHHHHHHHHH--H
Q 002031 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--A 279 (977)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~--l 279 (977)
+.+.++.+ ..-+.+-.++. ....++||||++|..+.++.. ...+++...+...+.+++ +
T Consensus 76 ~~l~~l~h-----------------~~iv~~~~~~~~~~~~~lv~e~~~~~~l~~~~~-~~~~~~~~~~~~~~~qi~~~l 137 (331)
T 4aaa_A 76 KLLKQLRH-----------------ENLVNLLEVCKKKKRWYLVFEFVDHTILDDLEL-FPNGLDYQVVQKYLFQIINGI 137 (331)
T ss_dssp HHHHHCCC-----------------TTBCCEEEEEEETTEEEEEEECCSEEHHHHHHH-STTCCCHHHHHHHHHHHHHHH
T ss_pred HHHhhCCC-----------------CCEeeEEEEeecCCEEEEEEecCCcchHHHHHh-hccCCCHHHHHHHHHHHHHHH
Confidence 55444421 01112222222 455689999999988876532 233466666666665555 8
Q ss_pred HHHHhcCccccCCCCCCeEEccCCCCceEEEecccccccCH
Q 002031 280 HQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 320 (977)
Q Consensus 280 ~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 320 (977)
..+|..|++|+|+||.||+++.+ +.++|+|||++..+..
T Consensus 138 ~~LH~~~ivH~dlkp~Nil~~~~--~~~kl~Dfg~~~~~~~ 176 (331)
T 4aaa_A 138 GFCHSHNIIHRDIKPENILVSQS--GVVKLCDFGFARTLAA 176 (331)
T ss_dssp HHHHHTTCCCCCCCGGGEEECTT--SCEEECCCTTC-----
T ss_pred HHHHHCCEEccCcChheEEEcCC--CcEEEEeCCCceeecC
Confidence 88999999999999999999865 8999999999977654
|
| >3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A* | Back alignment and structure |
|---|
Probab=99.33 E-value=1.6e-12 Score=147.67 Aligned_cols=74 Identities=20% Similarity=0.248 Sum_probs=54.5
Q ss_pred ceEEeeccCCCCCCChHHHHhcCCC--HH-------HHHHHHHHHHHHHHHhcCccccCCCCCCeEEccCCCCceEEEec
Q 002031 242 TVLILEFMDGIRLNDCESLEAFGVN--KQ-------KVVEEITRAYAHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDF 312 (977)
Q Consensus 242 ~vLVmE~i~G~~L~~~~~~~~~~~~--~~-------~l~~~l~~~~l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDF 312 (977)
.+|||||++ .+|.++......... .. .++..++.. +..+|..|++||||||.|||++.+ +.++|+||
T Consensus 163 ~~lv~e~~~-~~L~~~l~~~~~~~~~~~~~~~~vk~~i~~qi~~a-L~~LH~~~ivHrDikp~NIll~~~--~~~kL~DF 238 (371)
T 3q60_A 163 YLLLMPAAS-VDLELLFSTLDFVYVFRGDEGILALHILTAQLIRL-AANLQSKGLVHGHFTPDNLFIMPD--GRLMLGDV 238 (371)
T ss_dssp EEEEECCCS-EEHHHHHHHHHHSCCCCHHHHHHHHHHHHHHHHHH-HHHHHHTTEEETTCSGGGEEECTT--SCEEECCG
T ss_pred EEEEecCCC-CCHHHHHHHhccccchhhhhhhhhHHHHHHHHHHH-HHHHHHCCCccCcCCHHHEEECCC--CCEEEEec
Confidence 589999999 588777543222222 11 222333332 788999999999999999999865 89999999
Q ss_pred ccccccC
Q 002031 313 GLTKKLS 319 (977)
Q Consensus 313 G~~~~l~ 319 (977)
|++....
T Consensus 239 G~a~~~~ 245 (371)
T 3q60_A 239 SALWKVG 245 (371)
T ss_dssp GGEEETT
T ss_pred ceeeecC
Confidence 9998765
|
| >2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A* | Back alignment and structure |
|---|
Probab=99.33 E-value=1.1e-12 Score=144.62 Aligned_cols=145 Identities=18% Similarity=0.136 Sum_probs=89.6
Q ss_pred ccccccccccEEEEEEe-cCCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCcHHH
Q 002031 123 ETPLATASIAQVHRATL-VDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSE 201 (977)
Q Consensus 123 ~~piasaSigqV~~A~l-~~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~E 201 (977)
.+.||+|++|.||+|+. .+|+.||||+.++.-... -.. .-++.+|
T Consensus 37 ~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~----~~~------------------------------~~~~~~E 82 (310)
T 2wqm_A 37 EKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMD----AKA------------------------------RADCIKE 82 (310)
T ss_dssp EEEEECC--CEEEEEEETTTCCEEEEEEECTTSSCC----HHH------------------------------HHHHHHH
T ss_pred EEeecCCCCceEEEEEEcCCCceEEEEeeehhhccC----HHH------------------------------HHHHHHH
Confidence 36899999999999997 589999999886421100 000 0023445
Q ss_pred HHHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeee-cCCceEEeeccCCCCCCChHHHH---hcCCCHHHHHHHHHHH
Q 002031 202 AENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLE---AFGVNKQKVVEEITRA 277 (977)
Q Consensus 202 a~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLVmE~i~G~~L~~~~~~~---~~~~~~~~l~~~l~~~ 277 (977)
++.+.++.+ ..-+.+-..+. ....++||||++|.+|.++.... ...++...+...+.++
T Consensus 83 ~~~l~~l~h-----------------~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi 145 (310)
T 2wqm_A 83 IDLLKQLNH-----------------PNVIKYYASFIEDNELNIVLELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQL 145 (310)
T ss_dssp HHHHHTCCC-----------------TTBCCEEEEEEETTEEEEEEECCCSCBHHHHHHHHHHTTCCCCHHHHHHHHHHH
T ss_pred HHHHHhCCC-----------------CCEeeEEEEEEcCCcEEEEEecCCCCCHHHHHHHhcccccCCCHHHHHHHHHHH
Confidence 555444321 01111212222 45668999999999998775421 2235556555555554
Q ss_pred H--HHHHHhcCccccCCCCCCeEEccCCCCceEEEecccccccCH
Q 002031 278 Y--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 320 (977)
Q Consensus 278 ~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 320 (977)
+ +..+|..|++|+|+||.||+++.+ +.++|+|||++..+..
T Consensus 146 ~~~l~~LH~~~i~H~dl~p~NIl~~~~--~~~kl~Dfg~~~~~~~ 188 (310)
T 2wqm_A 146 CSALEHMHSRRVMHRDIKPANVFITAT--GVVKLGDLGLGRFFSS 188 (310)
T ss_dssp HHHHHHHHHTTCCCCCCCGGGEEECTT--SCEEECCC--------
T ss_pred HHHHHHHhhCCeeCCCCcHHHEEEcCC--CCEEEEeccceeeecC
Confidence 4 788999999999999999999855 8999999999877654
|
| >3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A* | Back alignment and structure |
|---|
Probab=99.33 E-value=2.9e-12 Score=150.22 Aligned_cols=138 Identities=18% Similarity=0.255 Sum_probs=88.1
Q ss_pred cccccccccEEEEEEec-CCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCcHHHH
Q 002031 124 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (977)
Q Consensus 124 ~piasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea 202 (977)
+.||.|++|.||+|+.. +|+.||||+.......... . + .+.+|.
T Consensus 68 ~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~--~---~------------------------------~~~~E~ 112 (464)
T 3ttj_A 68 KPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTH--A---K------------------------------RAYREL 112 (464)
T ss_dssp EEEEECSSCEEEEEEETTTTEEEEEEEEESGGGSHHH--H---H------------------------------HHHHHH
T ss_pred EEeecCCCeEEEEEEECCCCCEEEEEEECccccChHH--H---H------------------------------HHHHHH
Confidence 78999999999999974 7999999988653211100 0 0 123344
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeeec-------CCceEEeeccCCCCCCChHHHHhcCCCHHHHHHHHH
Q 002031 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQS-------SETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEIT 275 (977)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~~-------~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~ 275 (977)
+.+..+.+ ...+.+-.++.. ...+|||||++|..+. .....++...+...+.
T Consensus 113 ~~l~~l~h-----------------pnIv~l~~~~~~~~~~~~~~~~~lv~E~~~~~l~~----~~~~~l~~~~~~~~~~ 171 (464)
T 3ttj_A 113 VLMKCVNH-----------------KNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQ----VIQMELDHERMSYLLY 171 (464)
T ss_dssp HHHHHCCC-----------------TTBCCCSEEECSCCSTTTCCEEEEEEECCSEEHHH----HHTSCCCHHHHHHHHH
T ss_pred HHHHhCCC-----------------CCCCcEEEEEccCCccccCCeEEEEEeCCCCCHHH----HHhhcCCHHHHHHHHH
Confidence 44444321 111222222221 2348999999875222 1223456555555555
Q ss_pred HHH--HHHHHhcCccccCCCCCCeEEccCCCCceEEEecccccccC
Q 002031 276 RAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 319 (977)
Q Consensus 276 ~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~ 319 (977)
+++ +..+|..|++|||+||+|||++.+ +.++|+|||+++...
T Consensus 172 qil~aL~~lH~~~iiHrDlkp~NIll~~~--~~~kl~DFG~a~~~~ 215 (464)
T 3ttj_A 172 QMLCGIKHLHSAGIIHRDLKPSNIVVKSD--CTLKILDFGLARTAG 215 (464)
T ss_dssp HHHHHHHHHHHTTCCCCCCCGGGEEECTT--SCEEECCCCCC----
T ss_pred HHHHHHHHHHHCCcccCCCChHhEEEeCC--CCEEEEEEEeeeecC
Confidence 544 889999999999999999999965 899999999987553
|
| >1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B* | Back alignment and structure |
|---|
Probab=99.33 E-value=1.9e-12 Score=141.09 Aligned_cols=144 Identities=17% Similarity=0.130 Sum_probs=91.6
Q ss_pred cccccccccEEEEEEec--CCC--EEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCcH
Q 002031 124 TPLATASIAQVHRATLV--DGR--QVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFN 199 (977)
Q Consensus 124 ~piasaSigqV~~A~l~--~G~--~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~ 199 (977)
+.||+|++|+||+|+.. +++ .||||+.++.....-. .. -++.
T Consensus 24 ~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~------------------------~~----------~~~~ 69 (291)
T 1u46_A 24 EKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPE------------------------AM----------DDFI 69 (291)
T ss_dssp EECC----CCCEEEEEECTTSCEEEEEEEC--------CH------------------------HH----------HHHH
T ss_pred eeecCCCceeEEEEEeccCCCceeEEEEEEEccCccCCHH------------------------HH----------HHHH
Confidence 67999999999999863 344 6899987654221100 00 0234
Q ss_pred HHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeeecCCceEEeeccCCCCCCChHHHHhcCCCHHHHHHHHHHHH-
Q 002031 200 SEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQSSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY- 278 (977)
Q Consensus 200 ~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~- 278 (977)
+|++.+.++.+ ..-+.+-.++.....++||||++|.+|.+........++...+...+.+++
T Consensus 70 ~e~~~l~~l~h-----------------~~i~~~~~~~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~ 132 (291)
T 1u46_A 70 REVNAMHSLDH-----------------RNLIRLYGVVLTPPMKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAE 132 (291)
T ss_dssp HHHHHHHHCCC-----------------TTBCCEEEEECSSSCEEEEECCTTCBHHHHHHHHGGGSCHHHHHHHHHHHHH
T ss_pred HHHHHHHhCCC-----------------CCcccEEEEEccCCceeeEecccCCCHHHHHHhccCCcCHHHHHHHHHHHHH
Confidence 55555555421 111222223335567899999999999877544334466666666666655
Q ss_pred -HHHHHhcCccccCCCCCCeEEccCCCCceEEEecccccccCH
Q 002031 279 -AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 320 (977)
Q Consensus 279 -l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 320 (977)
+..+|..|++|+|+||.||+++.+ +.++|+|||++..+..
T Consensus 133 ~l~~lH~~~i~H~dikp~Nili~~~--~~~kl~Dfg~~~~~~~ 173 (291)
T 1u46_A 133 GMGYLESKRFIHRDLAARNLLLATR--DLVKIGDFGLMRALPQ 173 (291)
T ss_dssp HHHHHHHTTEECSCCCGGGEEEEET--TEEEECCCTTCEECCC
T ss_pred HHHHHHhCCcccCCCchheEEEcCC--CCEEEccccccccccc
Confidence 888999999999999999999866 8999999999887753
|
| >3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3v01_A* 3v04_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* ... | Back alignment and structure |
|---|
Probab=99.33 E-value=1.3e-12 Score=147.54 Aligned_cols=139 Identities=20% Similarity=0.190 Sum_probs=93.5
Q ss_pred cccccccccEEEEEEec-CCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCcHHHH
Q 002031 124 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (977)
Q Consensus 124 ~piasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea 202 (977)
+.||+|++|.||+|+.+ +|+.||||+.+......... .+.+|+
T Consensus 39 ~~lg~G~~g~V~~~~~~~~~~~va~K~~~~~~~~~~~~------------------------------------~~~~E~ 82 (360)
T 3eqc_A 39 SELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRN------------------------------------QIIREL 82 (360)
T ss_dssp EEEEECSSCEEEEEEETTTCCEEEEEEEECCCCHHHHH------------------------------------HHHHHH
T ss_pred eeecCCCCeEEEEEEECCCCcEEEEEEeccccCHHHHH------------------------------------HHHHHH
Confidence 57999999999999985 79999999987653221110 122333
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeee-cCCceEEeeccCCCCCCChHHHHhcCCCHHHHHHHHHHHH--H
Q 002031 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--A 279 (977)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~--l 279 (977)
+.+.++.+ ..-+.+-.++. ....+|||||++|.+|.++... ...++...+...+.+++ +
T Consensus 83 ~~l~~l~h-----------------~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~-~~~~~~~~~~~i~~~i~~~l 144 (360)
T 3eqc_A 83 QVLHECNS-----------------PYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKK-AGRIPEQILGKVSIAVIKGL 144 (360)
T ss_dssp GGGGGCCC-----------------TTBCCEEEEEEETTEEEEEECCCTTCBHHHHHHH-HSSCCHHHHHHHHHHHHHHH
T ss_pred HHHHHCCC-----------------CCEEEEeEEEEECCEEEEEEECCCCCCHHHHHHH-cCCCCHHHHHHHHHHHHHHH
Confidence 33222211 01112222222 4556899999999999887532 23455555555555544 7
Q ss_pred HHHHhc-CccccCCCCCCeEEccCCCCceEEEeccccccc
Q 002031 280 HQIYVD-GFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKL 318 (977)
Q Consensus 280 ~~i~~~-G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l 318 (977)
..+|.. |++|+|+||.|||++.+ +.++|+|||++..+
T Consensus 145 ~~lh~~~~i~H~dlkp~Nil~~~~--~~~kl~Dfg~~~~~ 182 (360)
T 3eqc_A 145 TYLREKHKIMHRDVKPSNILVNSR--GEIKLCDFGVSGQL 182 (360)
T ss_dssp HHHHHHHCCCCSCCSGGGEEECTT--CCEEECCCCCCHHH
T ss_pred HHHHHhCCEEcCCccHHHEEECCC--CCEEEEECCCCccc
Confidence 788874 99999999999999865 89999999998654
|
| >1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A* | Back alignment and structure |
|---|
Probab=99.33 E-value=1.1e-12 Score=142.45 Aligned_cols=138 Identities=22% Similarity=0.216 Sum_probs=89.1
Q ss_pred cccccccccEEEEEEecCCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCcHHHHH
Q 002031 124 TPLATASIAQVHRATLVDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEAE 203 (977)
Q Consensus 124 ~piasaSigqV~~A~l~~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea~ 203 (977)
+.||+|++|.||+|+. +|+.||||+.+..... + .+.+|++
T Consensus 27 ~~lg~G~~g~V~~~~~-~~~~vavK~~~~~~~~-----------------------------~----------~~~~E~~ 66 (278)
T 1byg_A 27 QTIGKGEFGDVMLGDY-RGNKVAVKCIKNDATA-----------------------------Q----------AFLAEAS 66 (278)
T ss_dssp EEEEECSSCEEEEEEE-TTEEEEEEECCCCC-------------------------------H----------HHHHTHH
T ss_pred eEEecCCCceEEEEEE-cCCEEEEEEecchhHH-----------------------------H----------HHHHHHH
Confidence 6899999999999987 5899999987643210 0 1233444
Q ss_pred HHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeee--cCCceEEeeccCCCCCCChHHHHhc-CCCHHHHHHHHHHHH--
Q 002031 204 NTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ--SSETVLILEFMDGIRLNDCESLEAF-GVNKQKVVEEITRAY-- 278 (977)
Q Consensus 204 n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~--~~~~vLVmE~i~G~~L~~~~~~~~~-~~~~~~l~~~l~~~~-- 278 (977)
.+.++.+ ..-+.+-.++. ....++||||++|.+|.++...... .++...+...+.+++
T Consensus 67 ~l~~l~h-----------------~~iv~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~~ 129 (278)
T 1byg_A 67 VMTQLRH-----------------SNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEA 129 (278)
T ss_dssp HHTTCCC-----------------TTBCCEEEEECCC--CCEEEECCCTTEEHHHHHHHHHHHHCCHHHHHHHHHHHHHH
T ss_pred HHHhCCC-----------------CCEeeEEEEEEcCCCceEEEEecCCCCCHHHHHHhcccccCCHHHHHHHHHHHHHH
Confidence 4333311 11122222222 2356899999999999887543221 145555555555544
Q ss_pred HHHHHhcCccccCCCCCCeEEccCCCCceEEEecccccccCH
Q 002031 279 AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 320 (977)
Q Consensus 279 l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 320 (977)
+..+|..|++|+|+||.||+++.+ +.++|+|||++.....
T Consensus 130 l~~lH~~~i~H~dlkp~Nil~~~~--~~~~l~Dfg~~~~~~~ 169 (278)
T 1byg_A 130 MEYLEGNNFVHRDLAARNVLVSED--NVAKVSDFGLTKEASS 169 (278)
T ss_dssp HHHHHHTTCCCSCCSGGGEEECTT--SCEEECCCCC------
T ss_pred HHHHHhCCccccCCCcceEEEeCC--CcEEEeeccccccccc
Confidence 888999999999999999999865 8999999999876543
|
| >1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A* | Back alignment and structure |
|---|
Probab=99.33 E-value=4.2e-12 Score=139.05 Aligned_cols=149 Identities=17% Similarity=0.171 Sum_probs=100.5
Q ss_pred cccccccccEEEEEEec-CCCEEEEEEecCChhhhhH-hhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCcHHH
Q 002031 124 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIIL-EDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSE 201 (977)
Q Consensus 124 ~piasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~-~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~E 201 (977)
+.||+|++|.||+|+.+ +|+.||||+.++....... .+. .+..+ .+.+|
T Consensus 23 ~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~-----------------------~~~~~------~~~~e 73 (298)
T 1phk_A 23 EILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEV-----------------------QELRE------ATLKE 73 (298)
T ss_dssp EEEEECSSEEEEEEEETTTTEEEEEEEEETTCSTTCCHHHH-----------------------HHHHH------HHHHH
T ss_pred eeecCCCceEEEEEEEcCcCceEEEEEEecccccccCHHHH-----------------------HHHHH------HHHHH
Confidence 68999999999999985 7899999998654321110 010 00111 23456
Q ss_pred HHHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeee-cCCceEEeeccCCCCCCChHHHHhcCCCHHHHHHHHHHHH--
Q 002031 202 AENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY-- 278 (977)
Q Consensus 202 a~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~-- 278 (977)
.+.+.++... ..-+.+-.++. ....+|||||++|.+|.++... ...++...+...+.+++
T Consensus 74 ~~~l~~l~~h----------------~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~-~~~~~~~~~~~~~~qi~~~ 136 (298)
T 1phk_A 74 VDILRKVSGH----------------PNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTE-KVTLSEKETRKIMRALLEV 136 (298)
T ss_dssp HHHHHHHTTC----------------TTBCCEEEEEECSSEEEEEEECCTTCBHHHHHHH-HSSCCHHHHHHHHHHHHHH
T ss_pred HHHHHHhcCC----------------CCEeeeeeeeccCCeEEEEEeccCCCcHHHHHhc-cCCCCHHHHHHHHHHHHHH
Confidence 6665555310 01112222222 4556899999999999877542 33466666666555554
Q ss_pred HHHHHhcCccccCCCCCCeEEccCCCCceEEEecccccccCH
Q 002031 279 AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 320 (977)
Q Consensus 279 l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 320 (977)
+..+|..|++|+|+||.||+++.+ +.++|+|||++..+..
T Consensus 137 l~~lH~~~i~H~dl~p~Nil~~~~--~~~kl~dfg~~~~~~~ 176 (298)
T 1phk_A 137 ICALHKLNIVHRDLKPENILLDDD--MNIKLTDFGFSCQLDP 176 (298)
T ss_dssp HHHHHHTTEECSCCSGGGEEECTT--CCEEECCCTTCEECCT
T ss_pred HHHHHHCCcccCCCCcceEEEcCC--CcEEEecccchhhcCC
Confidence 788999999999999999999865 8999999999887653
|
| >2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ... | Back alignment and structure |
|---|
Probab=99.33 E-value=2.2e-12 Score=139.51 Aligned_cols=137 Identities=17% Similarity=0.187 Sum_probs=94.5
Q ss_pred cccccccccEEEEEEec-CCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCcHHHH
Q 002031 124 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (977)
Q Consensus 124 ~piasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea 202 (977)
+.||+|++|+||+|+.+ +|+.||||+.+........ + .+.+|.
T Consensus 13 ~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~--------------------------~----------~~~~e~ 56 (276)
T 2yex_A 13 QTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCP--------------------------E----------NIKKEI 56 (276)
T ss_dssp EEEEECSSSEEEEEEETTTCCEEEEEEEEGGGCTTHH--------------------------H----------HHHHHH
T ss_pred EEeecCCCcEEEEEEECCCCcEEEEEEeeeccchhhh--------------------------H----------HHHHHH
Confidence 57999999999999985 7999999987643211000 0 123344
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceee---e-cCCceEEeeccCCCCCCChHHHHhcCCCHHHHHHHHHHHH
Q 002031 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVI---Q-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY 278 (977)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~---~-~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~ 278 (977)
..+..+.+ ..|++++ . ....++||||++|.+|.+.... ...++...+...+.+++
T Consensus 57 ~~l~~l~h--------------------~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~-~~~~~~~~~~~~~~~i~ 115 (276)
T 2yex_A 57 CINKMLNH--------------------ENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEP-DIGMPEPDAQRFFHQLM 115 (276)
T ss_dssp HHHHTCCC--------------------TTBCCEEEEEEETTEEEEEEECCTTEEGGGGSBT-TTBCCHHHHHHHHHHHH
T ss_pred HHHHhcCC--------------------CCceeeeeEEEcCCEEEEEEEecCCCcHHHHHhh-ccCCCHHHHHHHHHHHH
Confidence 44333211 1233333 2 4556899999999999876431 22355555555555544
Q ss_pred --HHHHHhcCccccCCCCCCeEEccCCCCceEEEecccccccC
Q 002031 279 --AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 319 (977)
Q Consensus 279 --l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~ 319 (977)
+..+|..|++|+|+||.||+++.+ +.++|+|||++..+.
T Consensus 116 ~~l~~lH~~~i~H~dl~p~Nil~~~~--~~~kl~dfg~~~~~~ 156 (276)
T 2yex_A 116 AGVVYLHGIGITHRDIKPENLLLDER--DNLKISDFGLATVFR 156 (276)
T ss_dssp HHHHHHHHTTEECSCCSGGGEEECTT--CCEEECCCTTCEECE
T ss_pred HHHHHHHhCCeeccCCChHHEEEccC--CCEEEeeCCCccccC
Confidence 888999999999999999999865 899999999987653
|
| >3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B* | Back alignment and structure |
|---|
Probab=99.32 E-value=2.2e-12 Score=147.35 Aligned_cols=141 Identities=14% Similarity=0.118 Sum_probs=97.3
Q ss_pred cccccc--cccEEEEEEec-CCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCcHH
Q 002031 124 TPLATA--SIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNS 200 (977)
Q Consensus 124 ~piasa--SigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~ 200 (977)
+.||.| ++|.||+|+.+ +|+.||||+.+...... + ... .+.+
T Consensus 31 ~~lG~G~~~~g~V~~~~~~~~~~~vavK~~~~~~~~~---~--------------------------~~~------~~~~ 75 (389)
T 3gni_B 31 TVIGKGFEDLMTVNLARYKPTGEYVTVRRINLEACSN---E--------------------------MVT------FLQG 75 (389)
T ss_dssp EEEEEETTTTEEEEEEEETTTCCEEEEEEEEGGGSCH---H--------------------------HHH------HHHH
T ss_pred ecccCCcCCceEEEEEEEcCCCCEEEEEEecccccCh---H--------------------------HHH------HHHH
Confidence 689999 99999999985 79999999986532111 0 000 1334
Q ss_pred HHHHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeee-cCCceEEeeccCCCCCCChHHHH-hcCCCHHHHHHHHHHHH
Q 002031 201 EAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLE-AFGVNKQKVVEEITRAY 278 (977)
Q Consensus 201 Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLVmE~i~G~~L~~~~~~~-~~~~~~~~l~~~l~~~~ 278 (977)
|++.+.++.+ ..-+.+-.++. ....+|||||++|.+|.++.... ...++...+...+.+++
T Consensus 76 E~~~l~~l~h-----------------~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~qi~ 138 (389)
T 3gni_B 76 ELHVSKLFNH-----------------PNIVPYRATFIADNELWVVTSFMAYGSAKDLICTHFMDGMNELAIAYILQGVL 138 (389)
T ss_dssp HHHHHHHCCC-----------------TTBCCEEEEEEETTEEEEEEECCTTCBHHHHHHHTCTTCCCHHHHHHHHHHHH
T ss_pred HHHHHHhCCC-----------------CCCCcEeEEEEECCEEEEEEEccCCCCHHHHHhhhcccCCCHHHHHHHHHHHH
Confidence 5555554422 11122222232 45668999999999998874422 13456666666555554
Q ss_pred --HHHHHhcCccccCCCCCCeEEccCCCCceEEEeccccccc
Q 002031 279 --AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKL 318 (977)
Q Consensus 279 --l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l 318 (977)
+..+|..|++|||+||.|||++.+ +.++|+|||.+..+
T Consensus 139 ~~l~~LH~~~ivHrDlkp~NIll~~~--~~~kl~dfg~~~~~ 178 (389)
T 3gni_B 139 KALDYIHHMGYVHRSVKASHILISVD--GKVYLSGLRSNLSM 178 (389)
T ss_dssp HHHHHHHHTTEECCCCSGGGEEECTT--CCEEECCGGGCEEC
T ss_pred HHHHHHHhCCeecCCCCHHHEEEcCC--CCEEEcccccceee
Confidence 888999999999999999999865 89999999987654
|
| >3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.32 E-value=3e-12 Score=143.75 Aligned_cols=140 Identities=15% Similarity=0.208 Sum_probs=95.0
Q ss_pred cccccccccEEEEEEecCCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCcHHHHH
Q 002031 124 TPLATASIAQVHRATLVDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEAE 203 (977)
Q Consensus 124 ~piasaSigqV~~A~l~~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea~ 203 (977)
+.||.|++|.||+|+..+|+.||||+.+......- . . -.+.+|++
T Consensus 15 ~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~--~-----------------------~----------~~~~~E~~ 59 (343)
T 3dbq_A 15 KQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQ--T-----------------------L----------DSYRNEIA 59 (343)
T ss_dssp EEESCCSSEEEEEEECTTSCEEEEEEEECTTCCHH--H-----------------------H----------HHHHHHHH
T ss_pred EEEecCCCeEEEEEEeCCCCEEEEEEeeccccchH--H-----------------------H----------HHHHHHHH
Confidence 67999999999999998999999998764321110 0 0 02455666
Q ss_pred HHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeee----cCCceEEeeccCCCCCCChHHHHhcCCCHHHHHHHHHHHH-
Q 002031 204 NTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ----SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY- 278 (977)
Q Consensus 204 n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~----~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~- 278 (977)
.+.++.+.. ..|++++. ....+||||+ .|.+|.++.. ....++...+...+.+++
T Consensus 60 ~l~~l~~~~------------------~~iv~~~~~~~~~~~~~lv~e~-~~~~L~~~l~-~~~~~~~~~~~~i~~qi~~ 119 (343)
T 3dbq_A 60 YLNKLQQHS------------------DKIIRLYDYEITDQYIYMVMEC-GNIDLNSWLK-KKKSIDPWERKSYWKNMLE 119 (343)
T ss_dssp HHHHHTTTC------------------TTBCCEEEEEECSSEEEEEECC-CSEEHHHHHH-HSCCCCHHHHHHHHHHHHH
T ss_pred HHHhhhhcC------------------CceEEEeeeEeeCCEEEEEEeC-CCCCHHHHHH-hcCCCCHHHHHHHHHHHHH
Confidence 666664310 12333332 3456899995 5667776643 223456555555555544
Q ss_pred -HHHHHhcCccccCCCCCCeEEccCCCCceEEEecccccccCHH
Q 002031 279 -AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSSS 321 (977)
Q Consensus 279 -l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~~ 321 (977)
+..+|..|++|||+||.|||++ + +.++|+|||++..+...
T Consensus 120 al~~lH~~~iiHrDikp~NIll~-~--~~~kl~DFG~a~~~~~~ 160 (343)
T 3dbq_A 120 AVHTIHQHGIVHSDLKPANFLIV-D--GMLKLIDFGIANQMQPD 160 (343)
T ss_dssp HHHHHHHTTCCCCCCCGGGEEEE-T--TEEEECCCSSSCCC---
T ss_pred HHHHHHhCCeecCCCCcceEEEE-C--CcEEEeecccccccCcc
Confidence 8889999999999999999996 3 78999999999887654
|
| >2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ... | Back alignment and structure |
|---|
Probab=99.32 E-value=1.4e-12 Score=144.00 Aligned_cols=142 Identities=18% Similarity=0.136 Sum_probs=95.2
Q ss_pred cccccccccEEEEEEe------cCCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccC
Q 002031 124 TPLATASIAQVHRATL------VDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELD 197 (977)
Q Consensus 124 ~piasaSigqV~~A~l------~~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld 197 (977)
+.||.|++|.||+|+. .+|+.||||+.+.+...... -.
T Consensus 33 ~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~------------------------------------~~ 76 (316)
T 2xir_A 33 KPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEH------------------------------------RA 76 (316)
T ss_dssp EEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHH------------------------------------HH
T ss_pred eEEcCCCceeEEEEEEecCCccccceEEEEEecccCCCcHHH------------------------------------HH
Confidence 6899999999999984 35789999998754321100 02
Q ss_pred cHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeee--cCCceEEeeccCCCCCCChHHHHhc------------
Q 002031 198 FNSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ--SSETVLILEFMDGIRLNDCESLEAF------------ 263 (977)
Q Consensus 198 ~~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~--~~~~vLVmE~i~G~~L~~~~~~~~~------------ 263 (977)
+.+|++.+.++.+. ..-+.+-..+. ....++||||++|.+|.++......
T Consensus 77 ~~~E~~~l~~l~~h----------------p~iv~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~ 140 (316)
T 2xir_A 77 LMSELKILIHIGHH----------------LNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDL 140 (316)
T ss_dssp HHHHHHHHHHHCCC----------------TTBCCEEEEECCTTSCCEEEEECCTTEEHHHHHHTCTTSEECC-------
T ss_pred HHHHHHHHHhcccC----------------CCeeeEEEEEecCCCceEEEEEcCCCCcHHHHHHhcccccccccccchhh
Confidence 34566666555210 00111222222 2346899999999999877432111
Q ss_pred ---CCCHHHHHHHHHHHH--HHHHHhcCccccCCCCCCeEEccCCCCceEEEecccccccC
Q 002031 264 ---GVNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 319 (977)
Q Consensus 264 ---~~~~~~l~~~l~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~ 319 (977)
.++...+...+.+++ +..+|..|++|+|+||.||+++.+ +.++|+|||++..+.
T Consensus 141 ~~~~~~~~~~~~~~~qi~~al~~lH~~~i~H~dikp~Nil~~~~--~~~kl~Dfg~~~~~~ 199 (316)
T 2xir_A 141 YKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEK--NVVKICDFGLARDIY 199 (316)
T ss_dssp CTTCEEHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECGG--GCEEECCCGGGSCTT
T ss_pred hccccCHHHHHHHHHHHHHHHHHHHhCCcccccCccceEEECCC--CCEEECCCccccccc
Confidence 034455555555544 788999999999999999999865 899999999997664
|
| >2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ... | Back alignment and structure |
|---|
Probab=99.32 E-value=2.9e-12 Score=145.53 Aligned_cols=140 Identities=21% Similarity=0.260 Sum_probs=81.5
Q ss_pred cccccccccEEEEEEe-cCCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCcHHHH
Q 002031 124 TPLATASIAQVHRATL-VDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (977)
Q Consensus 124 ~piasaSigqV~~A~l-~~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea 202 (977)
+.||+|++|.||+|+. .+|+.||||+.......... . -.+.+|.
T Consensus 35 ~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~--~---------------------------------~~~~~E~ 79 (367)
T 2fst_X 35 SPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIH--A---------------------------------KRTYREL 79 (367)
T ss_dssp EECC----CCEEEEEETTTTEEEEEEECSSTTSSHHH--H---------------------------------HHHHHHH
T ss_pred eEEeecCCeEEEEEEECCCCCEEEEEEeCccccCHHH--H---------------------------------HHHHHHH
Confidence 6899999999999996 57999999987643221100 0 0123444
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeee-------cCCceEEeeccCCCCCCChHHHHhcCCCHHHHHHHHH
Q 002031 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-------SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEIT 275 (977)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-------~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~ 275 (977)
+.+..+.+ ..-+.+-.++. ....++|||++ |.+|.++.. ...++...+...+.
T Consensus 80 ~~l~~l~h-----------------pnIv~~~~~~~~~~~~~~~~~~~lv~e~~-~~~L~~~~~--~~~l~~~~~~~i~~ 139 (367)
T 2fst_X 80 RLLKHMKH-----------------ENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADLNNIVK--CQKLTDDHVQFLIY 139 (367)
T ss_dssp HHHHHCCC-----------------TTBCCCSEEECSCSSGGGCCCCEEEEECC-CEECC-------CCCCHHHHHHHHH
T ss_pred HHHHhCCC-----------------CCCCcEEEEEecCCccccCCeEEEEeccc-CCCHHHHHh--cCCCCHHHHHHHHH
Confidence 44444321 00112222221 24468999999 678887743 34566666555555
Q ss_pred HHH--HHHHHhcCccccCCCCCCeEEccCCCCceEEEecccccccCH
Q 002031 276 RAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 320 (977)
Q Consensus 276 ~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 320 (977)
+++ +..+|..|++|||+||+|||++.+ +.++|+|||+++....
T Consensus 140 qi~~aL~~LH~~givH~Dlkp~NIll~~~--~~~kL~DFG~a~~~~~ 184 (367)
T 2fst_X 140 QILRGLKYIHSADIIHRDLKPSNLAVNED--CELKILDFGLARHTAD 184 (367)
T ss_dssp HHHHHHHHHHHTTCCCCCCCGGGEEECTT--CCEEECC---------
T ss_pred HHHHHHHHHHHCCeeeCCCCHhhEEECCC--CCEEEeeccccccccc
Confidence 544 888999999999999999999865 8999999999986543
|
| >1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A | Back alignment and structure |
|---|
Probab=99.32 E-value=1.1e-12 Score=143.39 Aligned_cols=79 Identities=19% Similarity=0.284 Sum_probs=60.8
Q ss_pred CCceEEeeccCCCCCCChHHHHhcCCCHHHHHHHHHHHH--HHHHHhcCccccCCCCCCeEEccCCCCceEEEecccccc
Q 002031 240 SETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKK 317 (977)
Q Consensus 240 ~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~ 317 (977)
...++||||++|.+|.++........+...+...+.+++ +..+|..|++|+|+||.||+++.+ +.++|+|||++..
T Consensus 88 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~i~H~dlkp~Nil~~~~--~~~kl~dfg~~~~ 165 (303)
T 1zy4_A 88 STLFIQMEYCENGTLYDLIHSENLNQQRDEYWRLFRQILEALSYIHSQGIIHRDLKPMNIFIDES--RNVKIGDFGLAKN 165 (303)
T ss_dssp EEEEEEEECCCSCBHHHHHHHSCGGGCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTT--SCEEECCCCCCSC
T ss_pred CceEEEEecCCCCCHHHhhhccccccchHHHHHHHHHHHHHHHHHHhCCeecccCCHHhEEEcCC--CCEEEeeCcchhh
Confidence 345899999999999887543222344455555444444 788999999999999999999865 8999999999987
Q ss_pred cCH
Q 002031 318 LSS 320 (977)
Q Consensus 318 l~~ 320 (977)
+..
T Consensus 166 ~~~ 168 (303)
T 1zy4_A 166 VHR 168 (303)
T ss_dssp TTC
T ss_pred ccc
Confidence 754
|
| >3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 4g5j_A* 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* ... | Back alignment and structure |
|---|
Probab=99.32 E-value=1.5e-12 Score=145.17 Aligned_cols=142 Identities=18% Similarity=0.153 Sum_probs=92.7
Q ss_pred cccccccccEEEEEEec-CCCE----EEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCc
Q 002031 124 TPLATASIAQVHRATLV-DGRQ----VVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDF 198 (977)
Q Consensus 124 ~piasaSigqV~~A~l~-~G~~----VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~ 198 (977)
+.||+|++|.||+|+.. +|+. ||||+.+...... ..-.|
T Consensus 21 ~~lG~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~~~~------------------------------------~~~~~ 64 (327)
T 3poz_A 21 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPK------------------------------------ANKEI 64 (327)
T ss_dssp EEEEEETTEEEEEEEECC----CCEEEEEEEC-------------------------------------------CHHHH
T ss_pred eEEeeCCCeEEEEEEEcCCCceEEEEEEEeecccccCHH------------------------------------HHHHH
Confidence 68999999999999964 5655 4677654321110 00124
Q ss_pred HHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeeecCCceEEeeccCCCCCCChHHHHhcCCCHHHHHHHHHHHH
Q 002031 199 NSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQSSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY 278 (977)
Q Consensus 199 ~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~ 278 (977)
.+|+..+.++.+ ..-+.+-.++.....+++|||++|.+|.+........++...+...+.+++
T Consensus 65 ~~E~~~l~~l~h-----------------~~iv~~~~~~~~~~~~~v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~qi~ 127 (327)
T 3poz_A 65 LDEAYVMASVDN-----------------PHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIA 127 (327)
T ss_dssp HHHHHHHHHCCB-----------------TTBCCEEEEEESSSEEEEEECCTTCBHHHHHHHSTTSCCHHHHHHHHHHHH
T ss_pred HHHHHHHHhCCC-----------------CCEeEEEEEEecCCeEEEEEecCCCcHHHHHHhcCCCCCHHHHHHHHHHHH
Confidence 556666655532 011222222235567899999999998877543334466666666555554
Q ss_pred --HHHHHhcCccccCCCCCCeEEccCCCCceEEEecccccccCH
Q 002031 279 --AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 320 (977)
Q Consensus 279 --l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 320 (977)
+..+|..|++|||+||.|||++.+ +.++|+|||+++.+..
T Consensus 128 ~~l~~LH~~~ivH~Dikp~NIll~~~--~~~kl~Dfg~a~~~~~ 169 (327)
T 3poz_A 128 KGMNYLEDRRLVHRDLAARNVLVKTP--QHVKITDFGLAKLLGA 169 (327)
T ss_dssp HHHHHHHHTTCCCSCCCGGGEEEEET--TEEEECCTTHHHHHTT
T ss_pred HHHHHHhhCCeeCCCCChheEEECCC--CCEEEccCcceeEccC
Confidence 889999999999999999999866 8999999999876543
|
| >4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.31 E-value=2.3e-12 Score=147.89 Aligned_cols=144 Identities=19% Similarity=0.201 Sum_probs=95.6
Q ss_pred cccccccccEEEEEEec-CCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCcHHHH
Q 002031 124 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (977)
Q Consensus 124 ~piasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea 202 (977)
+.||.|++|.||+|+.+ +|+.||||+.+...... . .+ .+.+|+
T Consensus 15 ~~LG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~---~-----------------------~~----------~~~~E~ 58 (396)
T 4eut_A 15 DILGQGATANVFRGRHKKTGDLFAIKVFNNISFLR---P-----------------------VD----------VQMREF 58 (396)
T ss_dssp EEEEECSSEEEEEEEETTTCCEEEEEEECGGGGGS---C-----------------------HH----------HHHHHH
T ss_pred EEEEcCCCeEEEEEEECCCCcEEEEEEeccccccc---h-----------------------HH----------HHHHHH
Confidence 57999999999999985 69999999976321100 0 00 123455
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeee-c--CCceEEeeccCCCCCCChHHHHhc--CCCHHHHHHHHHHH
Q 002031 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-S--SETVLILEFMDGIRLNDCESLEAF--GVNKQKVVEEITRA 277 (977)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~--~~~vLVmE~i~G~~L~~~~~~~~~--~~~~~~l~~~l~~~ 277 (977)
+.+.++.+ ..-+.+-.++. . ...+|||||++|.+|.++...... +++...+...+.++
T Consensus 59 ~~l~~l~h-----------------pnIv~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~qi 121 (396)
T 4eut_A 59 EVLKKLNH-----------------KNIVKLFAIEEETTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDV 121 (396)
T ss_dssp HHHHHCCC-----------------TTBCCEEEEEECTTTCCEEEEECCCTTEEHHHHTTSGGGTTCCCHHHHHHHHHHH
T ss_pred HHHHhcCC-----------------CCCCeEEEeeccCCCCeeEEEEecCCCCCHHHHHHhhhcccCCCHHHHHHHHHHH
Confidence 55554422 01122222222 2 245899999999998876432211 26666666666555
Q ss_pred H--HHHHHhcCccccCCCCCCeEEcc--CCCCceEEEecccccccCH
Q 002031 278 Y--AHQIYVDGFFNGDPHPGNFLVSK--DPPHRPILLDFGLTKKLSS 320 (977)
Q Consensus 278 ~--l~~i~~~G~~H~D~hPgNIlv~~--~~~g~i~LiDFG~~~~l~~ 320 (977)
+ +..+|..|++|+|+||+|||+.. ++++.++|+|||++..+..
T Consensus 122 ~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~~~~~kL~DFG~a~~~~~ 168 (396)
T 4eut_A 122 VGGMNHLRENGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELED 168 (396)
T ss_dssp HHHHHHHHHTTEECCCCCGGGEEEEECTTSCEEEEECCGGGCEECCC
T ss_pred HHHHHHHHHCCEEECCcCHHHEEEeecCCCceeEEEecCCCceEccC
Confidence 4 88999999999999999999821 1236799999999987654
|
| >3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii} | Back alignment and structure |
|---|
Probab=99.31 E-value=3.7e-12 Score=138.96 Aligned_cols=142 Identities=17% Similarity=0.236 Sum_probs=95.3
Q ss_pred ccccccccccEEEEEEec-CCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCcHHH
Q 002031 123 ETPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSE 201 (977)
Q Consensus 123 ~~piasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~E 201 (977)
.+.||+|++|.||+|+.+ +|+.||||+........ +. -.+.+|
T Consensus 27 ~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~---~~---------------------------------~~~~~E 70 (285)
T 3is5_A 27 KRKLGSGAFGDVHLVEERSSGLERVIKTINKDRSQV---PM---------------------------------EQIEAE 70 (285)
T ss_dssp EEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGCCS---CH---------------------------------HHHHHH
T ss_pred cceeccCCCeEEEEEEEccCCceEEEEEeeccccch---hH---------------------------------HHHHHH
Confidence 368999999999999974 79999999876432110 00 013345
Q ss_pred HHHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceee---e-cCCceEEeeccCCCCCCChHHHH---hcCCCHHHHHHHH
Q 002031 202 AENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVI---Q-SSETVLILEFMDGIRLNDCESLE---AFGVNKQKVVEEI 274 (977)
Q Consensus 202 a~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~---~-~~~~vLVmE~i~G~~L~~~~~~~---~~~~~~~~l~~~l 274 (977)
++.+.++.+ ..|++++ . ....++||||++|.+|.+..... ...++...+...+
T Consensus 71 ~~~l~~l~h--------------------p~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~ 130 (285)
T 3is5_A 71 IEVLKSLDH--------------------PNIIKIFEVFEDYHNMYIVMETCEGGELLERIVSAQARGKALSEGYVAELM 130 (285)
T ss_dssp HHHHHTCCC--------------------TTBCCEEEEEECSSEEEEEECCCSCCBHHHHHHHHHHHTCCCCHHHHHHHH
T ss_pred HHHHHhCCC--------------------chHHhHHHheecCCeEEEEEEeCCCCcHHHHHHhhhhcccCCCHHHHHHHH
Confidence 554444321 1123333 2 35568999999999987764321 2346666666555
Q ss_pred HHHH--HHHHHhcCccccCCCCCCeEEccC-CCCceEEEecccccccCH
Q 002031 275 TRAY--AHQIYVDGFFNGDPHPGNFLVSKD-PPHRPILLDFGLTKKLSS 320 (977)
Q Consensus 275 ~~~~--l~~i~~~G~~H~D~hPgNIlv~~~-~~g~i~LiDFG~~~~l~~ 320 (977)
.+++ +..+|..|++|+|+||.||+++.+ .++.++|+|||++..+..
T Consensus 131 ~qi~~~L~~LH~~~ivH~dikp~NIl~~~~~~~~~~kl~Dfg~a~~~~~ 179 (285)
T 3is5_A 131 KQMMNALAYFHSQHVVHKDLKPENILFQDTSPHSPIKIIDFGLAELFKS 179 (285)
T ss_dssp HHHHHHHHHHHHTTCCCCCCSGGGEEESSSSTTCCEEECCCCCCCC---
T ss_pred HHHHHHHHHHHhCCEEECCCCHHHEEEecCCCCCCEEEEeeecceecCC
Confidence 5544 888999999999999999999642 347899999999987654
|
| >2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A* | Back alignment and structure |
|---|
Probab=99.31 E-value=3.4e-12 Score=142.85 Aligned_cols=143 Identities=13% Similarity=0.118 Sum_probs=96.8
Q ss_pred ccccccccccEEEEEEec-CCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCcHHH
Q 002031 123 ETPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSE 201 (977)
Q Consensus 123 ~~piasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~E 201 (977)
.+.||+|++|.||+|+.. +|+.||+|+........- . . .-.+.+|
T Consensus 46 ~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~----~------------------------~------~~~~~~E 91 (335)
T 2owb_A 46 GRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKP----H------------------------Q------REKMSME 91 (335)
T ss_dssp EEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSH----H------------------------H------HHHHHHH
T ss_pred EEEEeeCCCeEEEEEEECCCCCEEEEEEechhhhcCH----H------------------------H------HHHHHHH
Confidence 368999999999999985 689999998764321000 0 0 0013344
Q ss_pred HHHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeee-cCCceEEeeccCCCCCCChHHHHhcCCCHHHHHHHHHHHH--
Q 002031 202 AENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY-- 278 (977)
Q Consensus 202 a~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~-- 278 (977)
+..+..+.+ ..-+.+-.++. ....++||||++|.+|.++.. ....++...+...+.+++
T Consensus 92 ~~~l~~l~h-----------------~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~-~~~~l~~~~~~~i~~qi~~a 153 (335)
T 2owb_A 92 ISIHRSLAH-----------------QHVVGFHGFFEDNDFVFVVLELCRRRSLLELHK-RRKALTEPEARYYLRQIVLG 153 (335)
T ss_dssp HHHHHTCCC-----------------TTBCCEEEEEECSSEEEEEECCCTTCBHHHHHH-HHCSCCHHHHHHHHHHHHHH
T ss_pred HHHHHhCCC-----------------CCCCeEEEEEecCCeEEEEEecCCCCCHHHHHh-ccCCCCHHHHHHHHHHHHHH
Confidence 444443321 11112222222 345689999999999887643 234466666666665555
Q ss_pred HHHHHhcCccccCCCCCCeEEccCCCCceEEEecccccccC
Q 002031 279 AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 319 (977)
Q Consensus 279 l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~ 319 (977)
+..+|..|++|+|+||.||+++.+ ++++|+|||++..+.
T Consensus 154 L~~LH~~~ivH~dlkp~NIl~~~~--~~~kl~Dfg~~~~~~ 192 (335)
T 2owb_A 154 CQYLHRNRVIHRDLKLGNLFLNED--LEVKIGDFGLATKVE 192 (335)
T ss_dssp HHHHHHTTEECSCCCGGGEEECTT--CCEEECCCTTCEECC
T ss_pred HHHHHHCCCEecCCCchhEEEcCC--CCEEEeeccCceecc
Confidence 888999999999999999999865 899999999998764
|
| >3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A* | Back alignment and structure |
|---|
Probab=99.31 E-value=3.7e-12 Score=138.40 Aligned_cols=144 Identities=18% Similarity=0.214 Sum_probs=96.2
Q ss_pred cccccccccEEEEEEec-CCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCcHHHH
Q 002031 124 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (977)
Q Consensus 124 ~piasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea 202 (977)
+.||.|++|.||+|+.+ +|+.||||+........ .+.. .+.+|+
T Consensus 12 ~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~--~~~~---------------------------------~~~~e~ 56 (284)
T 3kk8_A 12 EELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSA--RDFQ---------------------------------KLEREA 56 (284)
T ss_dssp EEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCH--HHHH---------------------------------HHHHHH
T ss_pred hhhcCcCCeEEEEEEEcCCCceEEEEEeecccCCH--HHHH---------------------------------HHHHHH
Confidence 57999999999999974 79999999976432110 0000 133455
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeee-cCCceEEeeccCCCCCCChHHHHhcCCCHHHHHHHHHHHH--H
Q 002031 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--A 279 (977)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~--l 279 (977)
+.+.++.+ ..-+.+-.++. ....++||||++|.+|.+... ....++...+...+.+++ +
T Consensus 57 ~~l~~l~h-----------------~~i~~~~~~~~~~~~~~~v~e~~~~~~l~~~~~-~~~~~~~~~~~~~~~~i~~~l 118 (284)
T 3kk8_A 57 RICRKLQH-----------------PNIVRLHDSIQEESFHYLVFDLVTGGELFEDIV-AREFYSEADASHCIQQILESI 118 (284)
T ss_dssp HHHHHCCC-----------------TTBCCEEEEEECSSEEEEEECCCCSCBHHHHHH-HHSSCCHHHHHHHHHHHHHHH
T ss_pred HHHHHcCC-----------------CCcCeEEEEEEcCCEEEEEEecCCCCCHHHHHH-hcCCCCHHHHHHHHHHHHHHH
Confidence 55555421 01112222222 455689999999998866543 233456666655555544 8
Q ss_pred HHHHhcCccccCCCCCCeEEccCC-CCceEEEecccccccCH
Q 002031 280 HQIYVDGFFNGDPHPGNFLVSKDP-PHRPILLDFGLTKKLSS 320 (977)
Q Consensus 280 ~~i~~~G~~H~D~hPgNIlv~~~~-~g~i~LiDFG~~~~l~~ 320 (977)
..+|..|++|+|+||.||+++.++ .+.++|+|||++.....
T Consensus 119 ~~lH~~~i~H~dikp~Nil~~~~~~~~~~kl~Dfg~~~~~~~ 160 (284)
T 3kk8_A 119 AYCHSNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVND 160 (284)
T ss_dssp HHHHHTTEECSCCCGGGEEESSSSTTCCEEECCCTTCEECCS
T ss_pred HHHHHCCcCcCCCCHHHEEEecCCCCCcEEEeeceeeEEccc
Confidence 889999999999999999998542 24599999999876653
|
| >2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A* | Back alignment and structure |
|---|
Probab=99.31 E-value=6.5e-12 Score=143.27 Aligned_cols=143 Identities=17% Similarity=0.163 Sum_probs=92.6
Q ss_pred cccccccccEEEEEEec-CCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCcHHHH
Q 002031 124 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (977)
Q Consensus 124 ~piasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea 202 (977)
+.||+|++|+||+|+.+ +|+.||||+.+..-. .. + .+..|.
T Consensus 60 ~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~--~~--------------------------~----------~~~~e~ 101 (382)
T 2vx3_A 60 SLIGKGSFGQVVKAYDRVEQEWVAIKIIKNKKA--FL--------------------------N----------QAQIEV 101 (382)
T ss_dssp EEEEEETTEEEEEEEETTTTEEEEEEEECSSHH--HH--------------------------H----------HHHHHH
T ss_pred EEEeecCCEEEEEEEEcCCCcEEEEEEEeccHH--HH--------------------------H----------HHHHHH
Confidence 68999999999999975 789999999864311 00 0 122344
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceee---e-cCCceEEeeccCCCCCCChHHHHh-cCCCHHHHHHHHHHH
Q 002031 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVI---Q-SSETVLILEFMDGIRLNDCESLEA-FGVNKQKVVEEITRA 277 (977)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~---~-~~~~vLVmE~i~G~~L~~~~~~~~-~~~~~~~l~~~l~~~ 277 (977)
+.+..+.+.- ......+..++ . ....+|||||++| +|.++..... .+++...+...+.++
T Consensus 102 ~~l~~l~~~~--------------~~~~~~iv~~~~~~~~~~~~~lv~e~~~~-~L~~~l~~~~~~~~~~~~~~~i~~qi 166 (382)
T 2vx3_A 102 RLLELMNKHD--------------TEMKYYIVHLKRHFMFRNHLCLVFEMLSY-NLYDLLRNTNFRGVSLNLTRKFAQQM 166 (382)
T ss_dssp HHHHHHHHCS--------------SGGGGGBCCEEEEEEETTEEEEEEECCCC-BHHHHHHHTTTSCCCHHHHHHHHHHH
T ss_pred HHHHHHHhcc--------------cccceeEEEeeeeeccCCceEEEEecCCC-CHHHHHhhcCcCCCCHHHHHHHHHHH
Confidence 4444443310 00111233332 2 4566899999987 7766543221 235555555444444
Q ss_pred H--HHHHH--hcCccccCCCCCCeEEccCCCCceEEEecccccccC
Q 002031 278 Y--AHQIY--VDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 319 (977)
Q Consensus 278 ~--l~~i~--~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~ 319 (977)
+ +..+| ..|++|||+||.|||++.+.++.++|+|||++..+.
T Consensus 167 ~~al~~lH~~~~~ivHrDlkp~NIll~~~~~~~~kL~DFG~a~~~~ 212 (382)
T 2vx3_A 167 CTALLFLATPELSIIHCDLKPENILLCNPKRSAIKIVDFGSSCQLG 212 (382)
T ss_dssp HHHHHHHTSTTTCEECCCCSGGGEEESSTTSCCEEECCCTTCEETT
T ss_pred HHHHHHhccCCCCEEcCCCCcccEEEecCCCCcEEEEeccCceecc
Confidence 3 66677 579999999999999975445789999999998764
|
| >3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II} | Back alignment and structure |
|---|
Probab=99.31 E-value=7.6e-13 Score=148.27 Aligned_cols=147 Identities=19% Similarity=0.220 Sum_probs=92.4
Q ss_pred cccccccccEEEEEEe-cCCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCcHHHH
Q 002031 124 TPLATASIAQVHRATL-VDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (977)
Q Consensus 124 ~piasaSigqV~~A~l-~~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea 202 (977)
+.||+|++|.||+|+. .+|+.||||+.+.........+ ..-.+.+|+
T Consensus 32 ~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~--------------------------------~~~~~~~E~ 79 (345)
T 3hko_A 32 GAIGQGSYGVVRVAIENQTRAIRAIKIMNKNKIRQINPK--------------------------------DVERIKTEV 79 (345)
T ss_dssp EEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHC---C--------------------------------HHHHHHHHH
T ss_pred ceeeecCCeEEEEEEECCCCceEEEeehhhhhhcccCHH--------------------------------HHHHHHHHH
Confidence 6899999999999997 4789999998764321110000 001244566
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeee-cCCceEEeeccCCCCCCChHHHH--------------------
Q 002031 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLE-------------------- 261 (977)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLVmE~i~G~~L~~~~~~~-------------------- 261 (977)
+.+.++.+ ..-+.+-.++. ....+|||||++|.+|.+.....
T Consensus 80 ~~l~~l~h-----------------pniv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~~~~~ 142 (345)
T 3hko_A 80 RLMKKLHH-----------------PNIARLYEVYEDEQYICLVMELCHGGHLLDKLNVFIDDSTGKCAMDVVKTQICPC 142 (345)
T ss_dssp HHHHHCCC-----------------TTBCCEEEEEECSSEEEEEEECCCSCBHHHHEEEEEETTTTEEEEEEECCCCCCS
T ss_pred HHHHhCCC-----------------CCcceeehhhccCCeEEEEEeCCCCCcHHHHHHHhhccccccccccccccccccc
Confidence 66655421 01122222222 34568999999999887653100
Q ss_pred -------------------hcCCCHHHHHHHHHHHH--HHHHHhcCccccCCCCCCeEEccCCCCceEEEecccccccC
Q 002031 262 -------------------AFGVNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 319 (977)
Q Consensus 262 -------------------~~~~~~~~l~~~l~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~ 319 (977)
....+...+...+.+++ +..+|..|++|+|+||.||+++.++.+.++|+|||++..+.
T Consensus 143 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~kl~Dfg~a~~~~ 221 (345)
T 3hko_A 143 PECNEEAINGSIHGFRESLDFVQREKLISNIMRQIFSALHYLHNQGICHRDIKPENFLFSTNKSFEIKLVDFGLSKEFY 221 (345)
T ss_dssp HHHHHHHHHSCC--CEEECCHHHHHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESCSSSCCEEECCCTTCEEGG
T ss_pred ccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHCCccccCCChhhEEEecCCCceEEEeecccccccc
Confidence 00001222233333333 77889999999999999999986634489999999998764
|
| >2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A | Back alignment and structure |
|---|
Probab=99.31 E-value=1.3e-12 Score=145.28 Aligned_cols=146 Identities=18% Similarity=0.239 Sum_probs=97.2
Q ss_pred cccccccccEEEEEEec-CCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCcHHHH
Q 002031 124 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (977)
Q Consensus 124 ~piasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea 202 (977)
+.||+|++|.||+|+.+ +|+.||||+.+.........+ . ..-.+.+|+
T Consensus 18 ~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~---------------------~----------~~~~~~~E~ 66 (321)
T 2a2a_A 18 EELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRG---------------------V----------SREEIEREV 66 (321)
T ss_dssp EEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSSSCSSS---------------------B----------CHHHHHHHH
T ss_pred eEeeecCCEEEEEEEECCCCeEEEEEEEecccccccccc---------------------h----------hHHHHHHHH
Confidence 67999999999999985 799999999865432110000 0 001244565
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeee-cCCceEEeeccCCCCCCChHHHHhcCCCHHHHHHHHHHHH--H
Q 002031 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--A 279 (977)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~--l 279 (977)
..+..+.+ ...+.+-.++. ....++||||++|.+|.++.. ....++...+...+.+++ +
T Consensus 67 ~~l~~l~h-----------------~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~-~~~~~~~~~~~~i~~qi~~aL 128 (321)
T 2a2a_A 67 SILRQVLH-----------------HNVITLHDVYENRTDVVLILELVSGGELFDFLA-QKESLSEEEATSFIKQILDGV 128 (321)
T ss_dssp HHHHHCCC-----------------TTBCCEEEEEECSSEEEEEECCCCSCBHHHHHH-TCSCEEHHHHHHHHHHHHHHH
T ss_pred HHHHhCCC-----------------CCcceEEEEEecCCEEEEEEEcCCCCcHHHHHH-hcCCCCHHHHHHHHHHHHHHH
Confidence 55554421 01112222222 455689999999999987643 122345555555555544 7
Q ss_pred HHHHhcCccccCCCCCCeEEccCCCC----ceEEEecccccccCH
Q 002031 280 HQIYVDGFFNGDPHPGNFLVSKDPPH----RPILLDFGLTKKLSS 320 (977)
Q Consensus 280 ~~i~~~G~~H~D~hPgNIlv~~~~~g----~i~LiDFG~~~~l~~ 320 (977)
..+|..|++|+|+||.||+++.+ + +++|+|||++..+..
T Consensus 129 ~~lH~~~ivH~dikp~NIl~~~~--~~~~~~~kl~Dfg~~~~~~~ 171 (321)
T 2a2a_A 129 NYLHTKKIAHFDLKPENIMLLDK--NIPIPHIKLIDFGLAHEIED 171 (321)
T ss_dssp HHHHHTTEECCCCSGGGEEESCT--TSSSCCEEECCCTTCEECCT
T ss_pred HHHHhCCeecCCCChHHEEEecC--CCCcCCEEEccCccceecCc
Confidence 88999999999999999999865 4 799999999987654
|
| >3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2; KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase, structural genomics consortium; HET: SEP PTR IRB; 2.28A {Homo sapiens} PDB: 3k2l_A* 4azf_A* | Back alignment and structure |
|---|
Probab=99.31 E-value=3.6e-12 Score=147.90 Aligned_cols=143 Identities=13% Similarity=0.111 Sum_probs=93.9
Q ss_pred cccccccccEEEEEEec-CCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCcHHHH
Q 002031 124 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (977)
Q Consensus 124 ~piasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea 202 (977)
+.||.|++|+||+|+.+ +|+.||||+.+..-.. .. .+.+|.
T Consensus 103 ~~LG~G~fg~V~~a~~~~~~~~vAvK~~~~~~~~--~~------------------------------------~~~~E~ 144 (429)
T 3kvw_A 103 KVIGKGSFGQVVKAYDHKVHQHVALKMVRNEKRF--HR------------------------------------QAAEEI 144 (429)
T ss_dssp EEEEESSSEEEEEEEETTTTEEEEEEEECSCHHH--HH------------------------------------HHHHHH
T ss_pred EEcccCccEEEEEEEECCCCcEEEEEEECCccch--HH------------------------------------HHHHHH
Confidence 67999999999999874 6899999998753210 00 123344
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeee----cCCceEEeeccCCCCCCChHHHHh-cCCCHHHHHHHHHHH
Q 002031 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ----SSETVLILEFMDGIRLNDCESLEA-FGVNKQKVVEEITRA 277 (977)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~----~~~~vLVmE~i~G~~L~~~~~~~~-~~~~~~~l~~~l~~~ 277 (977)
+.+..+++.-. .....|..++. ....+|||||++| +|.++..... .+++...+...+.++
T Consensus 145 ~~l~~l~~~~~--------------~~~~~iv~~~~~~~~~~~~~lv~e~~~~-~L~~~l~~~~~~~~~~~~~~~i~~qi 209 (429)
T 3kvw_A 145 RILEHLRKQDK--------------DNTMNVIHMLENFTFRNHICMTFELLSM-NLYELIKKNKFQGFSLPLVRKFAHSI 209 (429)
T ss_dssp HHHHHHHTTCT--------------TSCSCBCCEEEEEEETTEEEEEECCCCC-BHHHHHHHTTTCCCCHHHHHHHHHHH
T ss_pred HHHHHHhhccc--------------cCCcCEEEEEeecccCCeEEEEEeccCC-CHHHHHHhccCCCCCHHHHHHHHHHH
Confidence 55555543210 11223333332 4556899999976 5555433221 235665555555554
Q ss_pred H--HHHHHhcCccccCCCCCCeEEccCCCCceEEEecccccccC
Q 002031 278 Y--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 319 (977)
Q Consensus 278 ~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~ 319 (977)
+ +..+|..|++|||+||.|||++.++...++|+|||++....
T Consensus 210 ~~aL~~LH~~~ivHrDlKp~NILl~~~~~~~vkL~DFG~a~~~~ 253 (429)
T 3kvw_A 210 LQCLDALHKNRIIHCDLKPENILLKQQGRSGIKVIDFGSSCYEH 253 (429)
T ss_dssp HHHHHHHHHHTEECSCCSGGGEEESSTTSCCEEECCCTTCEETT
T ss_pred HHHHHHHHHCCeecCCCCHHHeEEccCCCcceEEeecccceecC
Confidence 4 88899999999999999999997622239999999986543
|
| >1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A* | Back alignment and structure |
|---|
Probab=99.31 E-value=3.8e-12 Score=142.28 Aligned_cols=75 Identities=16% Similarity=0.200 Sum_probs=61.4
Q ss_pred CceEEeeccCCCCCCChHHHHhcCCCHHHHHHHHHHHH--HHHHH--------hcCccccCCCCCCeEEccCCCCceEEE
Q 002031 241 ETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--AHQIY--------VDGFFNGDPHPGNFLVSKDPPHRPILL 310 (977)
Q Consensus 241 ~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~--l~~i~--------~~G~~H~D~hPgNIlv~~~~~g~i~Li 310 (977)
..++||||++|.+|.++. ....++...+...+.++. +..+| ..|++|+|+||.|||++.+ ++++|+
T Consensus 114 ~~~lv~e~~~~g~L~~~l--~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dlkp~NIll~~~--~~~kL~ 189 (342)
T 1b6c_B 114 QLWLVSDYHEHGSLFDYL--NRYTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKN--GTCCIA 189 (342)
T ss_dssp CEEEEECCCTTCBHHHHH--HHCCBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCEEECSCCSGGGEEECTT--SCEEEC
T ss_pred eeEEEEeecCCCcHHHHH--hccCccHHHHHHHHHHHHHHHHHHHHHHhhhcccCCeeeCCCCHHHEEECCC--CCEEEE
Confidence 568999999999998874 445566666666666554 78889 8999999999999999865 899999
Q ss_pred ecccccccC
Q 002031 311 DFGLTKKLS 319 (977)
Q Consensus 311 DFG~~~~l~ 319 (977)
|||++..+.
T Consensus 190 Dfg~~~~~~ 198 (342)
T 1b6c_B 190 DLGLAVRHD 198 (342)
T ss_dssp CCTTCEEEE
T ss_pred ECCCceecc
Confidence 999987654
|
| >3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii} | Back alignment and structure |
|---|
Probab=99.31 E-value=2.1e-12 Score=151.03 Aligned_cols=140 Identities=18% Similarity=0.209 Sum_probs=84.0
Q ss_pred cccccccccEEEEEEec-CCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCcHHHH
Q 002031 124 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (977)
Q Consensus 124 ~piasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea 202 (977)
+.||.|++|.||+|+.+ +|+.||||+.......... . -.+.+|+
T Consensus 59 ~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~~~~~~--~---------------------------------~~~~~E~ 103 (458)
T 3rp9_A 59 HLIGTGSYGHVCEAYDKLEKRVVAIKKILRVFEDLID--C---------------------------------KRILREI 103 (458)
T ss_dssp CC-------CEEEEEECC--CEEEEEEECSTTSSHHH--H---------------------------------HHHHHHH
T ss_pred eEeeecCCeEEEEEEECCCCcEEEEEEechhhcCHHH--H---------------------------------HHHHHHH
Confidence 67999999999999974 8999999987543221110 0 0234455
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeee------cCCceEEeeccCCCCCCChHHHHhcCCCHHHHHHHHHH
Q 002031 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ------SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITR 276 (977)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~------~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~ 276 (977)
+.+.++.+ ...+.+-.++. ....+|||||++| +|.++.. ....++...+...+.+
T Consensus 104 ~~l~~l~h-----------------~niv~l~~~~~~~~~~~~~~~~lv~e~~~~-~L~~~~~-~~~~l~~~~~~~~~~q 164 (458)
T 3rp9_A 104 AILNRLNH-----------------DHVVKVLDIVIPKDVEKFDELYVVLEIADS-DFKKLFR-TPVYLTELHIKTLLYN 164 (458)
T ss_dssp HHHHHCCC-----------------TTBCCEEEECCCSCTTTCCCEEEEECCCSE-EHHHHHH-SSCCCCHHHHHHHHHH
T ss_pred HHHHhCCC-----------------CCCCceEEEEecCCcccCceEEEEEecccc-chhhhcc-cCCCCCHHHHHHHHHH
Confidence 55555422 01122222221 1345899999865 4444321 1123555555555555
Q ss_pred HH--HHHHHhcCccccCCCCCCeEEccCCCCceEEEecccccccC
Q 002031 277 AY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 319 (977)
Q Consensus 277 ~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~ 319 (977)
++ +..+|..|++||||||+|||++.+ +.++|+|||+++.+.
T Consensus 165 i~~aL~~LH~~~iiHrDlKp~NILl~~~--~~~kl~DFGla~~~~ 207 (458)
T 3rp9_A 165 LLVGVKYVHSAGILHRDLKPANCLVNQD--CSVKVCDFGLARTVD 207 (458)
T ss_dssp HHHHHHHHHHTTCBCCCCCGGGEEECTT--CCEEECCCTTCBCTT
T ss_pred HHHHHHHHHhCCcCCCCCChhhEEECCC--CCEeecccccchhcc
Confidence 54 889999999999999999999865 899999999998764
|
| >3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ... | Back alignment and structure |
|---|
Probab=99.31 E-value=2.3e-12 Score=139.96 Aligned_cols=149 Identities=17% Similarity=0.261 Sum_probs=99.7
Q ss_pred cccccccccEEEEEEec-CCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCcHHHH
Q 002031 124 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (977)
Q Consensus 124 ~piasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea 202 (977)
+.||+|++|.||+|+.+ +|+.||||+.+.........+ ...-.+.+|+
T Consensus 11 ~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~-------------------------------~~~~~~~~E~ 59 (283)
T 3bhy_A 11 EELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRG-------------------------------VSREEIEREV 59 (283)
T ss_dssp EEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSTTCSSS-------------------------------BCHHHHHHHH
T ss_pred HhhcccCceEEEEEEEcCCCCeeehHHhhhccccccccc-------------------------------hHHHHHHHHH
Confidence 57999999999999985 799999998765322110000 0001244566
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeee-cCCceEEeeccCCCCCCChHHHHhcCCCHHHHHHHHHHHH--H
Q 002031 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--A 279 (977)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~--l 279 (977)
..+.++.+ ..-+.+-.++. ....++||||++|.+|.++.. ....++...+...+.+++ +
T Consensus 60 ~~l~~l~h-----------------~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~-~~~~~~~~~~~~~~~~i~~~l 121 (283)
T 3bhy_A 60 NILREIRH-----------------PNIITLHDIFENKTDVVLILELVSGGELFDFLA-EKESLTEDEATQFLKQILDGV 121 (283)
T ss_dssp HHHHHCCC-----------------TTBCCEEEEEECSSEEEEEEECCCSCBHHHHHH-HHSSCCHHHHHHHHHHHHHHH
T ss_pred HHHHhCCC-----------------CCeeehhheecCCCeEEEEEeecCCCcHHHHHH-hcCCCCHHHHHHHHHHHHHHH
Confidence 65555432 01122222222 455789999999999988753 234566666666655554 8
Q ss_pred HHHHhcCccccCCCCCCeEEccCC--CCceEEEecccccccCHH
Q 002031 280 HQIYVDGFFNGDPHPGNFLVSKDP--PHRPILLDFGLTKKLSSS 321 (977)
Q Consensus 280 ~~i~~~G~~H~D~hPgNIlv~~~~--~g~i~LiDFG~~~~l~~~ 321 (977)
..+|..|++|+|+||.||+++.++ ..+++|+|||++..+...
T Consensus 122 ~~lH~~~i~H~dl~p~Nil~~~~~~~~~~~kl~dfg~~~~~~~~ 165 (283)
T 3bhy_A 122 HYLHSKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAG 165 (283)
T ss_dssp HHHHHTTEECSCCSGGGEEESCSSSSSCCEEECCCTTCEECC--
T ss_pred HHHHhCCccCCCCChHHEEEecCCCCCCceEEEecccceeccCC
Confidence 889999999999999999998652 127999999999887653
|
| >3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 4ec9_A* 4ec8_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* 4bch_A* 4bci_A* 4bcj_A* 4bcf_A* | Back alignment and structure |
|---|
Probab=99.31 E-value=2e-12 Score=145.39 Aligned_cols=142 Identities=17% Similarity=0.189 Sum_probs=92.2
Q ss_pred ccccccccccEEEEEEe-cCCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCcHHH
Q 002031 123 ETPLATASIAQVHRATL-VDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSE 201 (977)
Q Consensus 123 ~~piasaSigqV~~A~l-~~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~E 201 (977)
.+.||+|++|.||+|+. .+|+.||||+........ .....+.+|
T Consensus 22 ~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~-----------------------------------~~~~~~~~E 66 (351)
T 3mi9_A 22 LAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKE-----------------------------------GFPITALRE 66 (351)
T ss_dssp EEECSSCSTTSEEEEEETTTCCEEEEEECCCSSCSS-----------------------------------SSCHHHHHH
T ss_pred EEEEecCCCcEEEEEEECCCCCEEEEEEEecccccc-----------------------------------cchHHHHHH
Confidence 36899999999999998 589999999875432110 001123445
Q ss_pred HHHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeee---------cCCceEEeeccCCCCCCChHHHHhcCCCHHHHHH
Q 002031 202 AENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ---------SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVE 272 (977)
Q Consensus 202 a~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~---------~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~ 272 (977)
++.+.++.+ ...+.+-.++. ....+|||||++| ++.+........++...+..
T Consensus 67 ~~~l~~l~h-----------------~~iv~~~~~~~~~~~~~~~~~~~~~lv~e~~~~-~l~~~l~~~~~~~~~~~~~~ 128 (351)
T 3mi9_A 67 IKILQLLKH-----------------ENVVNLIEICRTKASPYNRCKGSIYLVFDFCEH-DLAGLLSNVLVKFTLSEIKR 128 (351)
T ss_dssp HHHHHHCCC-----------------TTBCCEEEEEEEC--------CEEEEEEECCSE-EHHHHHHCTTSCCCHHHHHH
T ss_pred HHHHHhccC-----------------CCcccHhheeeccccccccCCceEEEEEeccCC-CHHHHHhhccCCCCHHHHHH
Confidence 555554422 01112222221 1235899999997 33332211123456666555
Q ss_pred HHHHHH--HHHHHhcCccccCCCCCCeEEccCCCCceEEEecccccccC
Q 002031 273 EITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 319 (977)
Q Consensus 273 ~l~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~ 319 (977)
.+.+++ +..+|..|++|+|+||+|||++.+ +.++|+|||++..++
T Consensus 129 i~~qi~~~l~~LH~~~ivH~Dlkp~NIl~~~~--~~~kl~Dfg~a~~~~ 175 (351)
T 3mi9_A 129 VMQMLLNGLYYIHRNKILHRDMKAANVLITRD--GVLKLADFGLARAFS 175 (351)
T ss_dssp HHHHHHHHHHHHHHTTEECCCCSGGGEEECTT--SCEEECCCTTCEECC
T ss_pred HHHHHHHHHHHHHHCCeeCCCCCHHHEEEcCC--CCEEEccchhccccc
Confidence 555544 888999999999999999999865 899999999987654
|
| >2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.30 E-value=3.8e-12 Score=141.38 Aligned_cols=141 Identities=14% Similarity=0.141 Sum_probs=93.7
Q ss_pred cccccccccEEEEEEe-cCCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCcHHHH
Q 002031 124 TPLATASIAQVHRATL-VDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (977)
Q Consensus 124 ~piasaSigqV~~A~l-~~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea 202 (977)
+.||+|++|.||+|+. .+|+.||||+.+..... +-++.+|.
T Consensus 30 ~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~--------------------------------------~~~~~~e~ 71 (326)
T 2x7f_A 30 ELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTGDE--------------------------------------EEEIKQEI 71 (326)
T ss_dssp EEEEEETTEEEEEEEETTTCCEEEEEEEECCSST--------------------------------------THHHHHHH
T ss_pred EEeccCCCEEEEEEEECCCCCeEEEEEEecCccc--------------------------------------HHHHHHHH
Confidence 6899999999999997 48999999997643211 00233454
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeee-------cCCceEEeeccCCCCCCChHHHH-hcCCCHHHHHHHH
Q 002031 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-------SSETVLILEFMDGIRLNDCESLE-AFGVNKQKVVEEI 274 (977)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-------~~~~vLVmE~i~G~~L~~~~~~~-~~~~~~~~l~~~l 274 (977)
..+.++.+ + ..-+.+-..+. ....+|||||++|.+|.++.... ...++...+...+
T Consensus 72 ~~l~~l~~---h-------------~~i~~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~ 135 (326)
T 2x7f_A 72 NMLKKYSH---H-------------RNIATYYGAFIKKNPPGMDDQLWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAYIC 135 (326)
T ss_dssp HHHHHHCC---S-------------TTBCCEEEEEEECC--CCCCEEEEEEECCTTEEHHHHHHHSGGGCCCHHHHHHHH
T ss_pred HHHHhccC---C-------------CCeeeeeeEEeeccCccccceEEEEEEcCCCCcHHHHHHhcccCCCCHHHHHHHH
Confidence 44444421 0 00111111111 23458999999999998875432 1345665555555
Q ss_pred HHHH--HHHHHhcCccccCCCCCCeEEccCCCCceEEEecccccccCH
Q 002031 275 TRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 320 (977)
Q Consensus 275 ~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 320 (977)
.+++ +..+|..|++|+|+||.||+++.+ ++++|+|||++..+..
T Consensus 136 ~qi~~~l~~lH~~~ivH~dlkp~NIl~~~~--~~~kl~Dfg~~~~~~~ 181 (326)
T 2x7f_A 136 REILRGLSHLHQHKVIHRDIKGQNVLLTEN--AEVKLVDFGVSAQLDR 181 (326)
T ss_dssp HHHHHHHHHHHHTTCCCCCCSGGGEEECTT--CCEEECCCTTTC----
T ss_pred HHHHHHHHHHHHCCccccCCcHHHEEEcCC--CCEEEeeCcCceecCc
Confidence 5544 888999999999999999999855 8999999999887654
|
| >3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} PDB: 3uib_A* | Back alignment and structure |
|---|
Probab=99.30 E-value=1.6e-12 Score=146.87 Aligned_cols=147 Identities=16% Similarity=0.167 Sum_probs=91.8
Q ss_pred cccccccccEEEEEEecCCCEEEEEEecCChhhhh----HhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCcH
Q 002031 124 TPLATASIAQVHRATLVDGRQVVVKVQHQGIKTII----LEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFN 199 (977)
Q Consensus 124 ~piasaSigqV~~A~l~~G~~VAVKv~~p~i~~~~----~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~ 199 (977)
+.||+|++|.||+|+..+|+.||||+.+......- ..+-... -.+.
T Consensus 28 ~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~------------------------------~~~~ 77 (362)
T 3pg1_A 28 RFISSGSYGAVCAGVDSEGIPVAIKRVFNTVSDGRTVNILSDSFLC------------------------------KRVL 77 (362)
T ss_dssp EEEEEETTEEEEEEECTTSCEEEEEEECEECCTTSCEEGGGSHHHH------------------------------HHHH
T ss_pred EEeccCCCEEEEEEECCCCCeEEEEeccccCCccchhhhhhhhhHH------------------------------HHHH
Confidence 68999999999999988899999998865332110 0010000 0244
Q ss_pred HHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeee------cCCceEEeeccCCCCCCChHHHHhcCCCHHHHHHH
Q 002031 200 SEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ------SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEE 273 (977)
Q Consensus 200 ~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~------~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~ 273 (977)
+|++.+.++.+ ..-+.+-.++. ....+|||||++| ++.+........++...+...
T Consensus 78 ~E~~~l~~l~h-----------------~~iv~~~~~~~~~~~~~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~ 139 (362)
T 3pg1_A 78 REIRLLNHFHH-----------------PNILGLRDIFVHFEEPAMHKLYLVTELMRT-DLAQVIHDQRIVISPQHIQYF 139 (362)
T ss_dssp HHHHHHHHCCC-----------------TTBCCCSEEEEECCTTTCCEEEEEEECCSE-EHHHHHHCTTSCCCHHHHHHH
T ss_pred HHHHHHHhCCC-----------------cCccceeeeEEeccCCCcceEEEEEccCCC-CHHHHHHhcccCCCHHHHHHH
Confidence 56666655532 11122222221 1234899999996 444332212223566666555
Q ss_pred HHHHH--HHHHHhcCccccCCCCCCeEEccCCCCceEEEecccccccCH
Q 002031 274 ITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 320 (977)
Q Consensus 274 l~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 320 (977)
+.+++ +..+|..|++|+|+||.||+++.+ +.++|+|||++.....
T Consensus 140 ~~qi~~~l~~lH~~~ivH~Dlkp~NIl~~~~--~~~kl~Dfg~~~~~~~ 186 (362)
T 3pg1_A 140 MYHILLGLHVLHEAGVVHRDLHPGNILLADN--NDITICDFNLAREDTA 186 (362)
T ss_dssp HHHHHHHHHHHHHTTCCCCCCCGGGEEECTT--CCEEECCTTC------
T ss_pred HHHHHHHHHHHHHCcCEecCCChHHEEEcCC--CCEEEEecCccccccc
Confidence 55544 888999999999999999999865 8999999999975443
|
| >2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A* | Back alignment and structure |
|---|
Probab=99.30 E-value=4.5e-12 Score=138.72 Aligned_cols=143 Identities=13% Similarity=0.112 Sum_probs=96.3
Q ss_pred ccccccccccEEEEEEec-CCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCcHHH
Q 002031 123 ETPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSE 201 (977)
Q Consensus 123 ~~piasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~E 201 (977)
.+.||+|++|+||+|+.+ +|+.||+|+........-. . .-.+.+|
T Consensus 20 ~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~----------------------------~------~~~~~~e 65 (294)
T 2rku_A 20 GRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPH----------------------------Q------REKMSME 65 (294)
T ss_dssp EEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSHH----------------------------H------HHHHHHH
T ss_pred EEEEeecCCEEEEEEEECCCCceEEEEEechhhccCHH----------------------------H------HHHHHHH
Confidence 368999999999999985 6899999987643211000 0 0013344
Q ss_pred HHHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeee-cCCceEEeeccCCCCCCChHHHHhcCCCHHHHHHHHHHHH--
Q 002031 202 AENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY-- 278 (977)
Q Consensus 202 a~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~-- 278 (977)
...+..+.+ ..-+.+-..+. ....++||||++|.+|.++.. ....++...+...+.+++
T Consensus 66 ~~~l~~l~h-----------------~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~-~~~~~~~~~~~~i~~qi~~~ 127 (294)
T 2rku_A 66 ISIHRSLAH-----------------QHVVGFHGFFEDNDFVFVVLELCRRRSLLELHK-RRKALTEPEARYYLRQIVLG 127 (294)
T ss_dssp HHHHHTCCC-----------------TTBCCEEEEEECSSEEEEEEECCTTCBHHHHHH-HHCSCCHHHHHHHHHHHHHH
T ss_pred HHHHHhCCC-----------------CCEeeeeeeeccCCEEEEEEecCCCCCHHHHHH-hcCCCCHHHHHHHHHHHHHH
Confidence 444433311 11112222222 344689999999999887643 223466666666555554
Q ss_pred HHHHHhcCccccCCCCCCeEEccCCCCceEEEecccccccC
Q 002031 279 AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 319 (977)
Q Consensus 279 l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~ 319 (977)
+..+|..|++|+|+||.||+++.+ ++++|+|||++..+.
T Consensus 128 l~~lH~~~i~H~dl~p~Nil~~~~--~~~kl~dfg~~~~~~ 166 (294)
T 2rku_A 128 CQYLHRNRVIHRDLKLGNLFLNED--LEVKIGDFGLATKVE 166 (294)
T ss_dssp HHHHHHTTEECCCCCGGGEEECTT--CCEEECCCTTCEECC
T ss_pred HHHHHHCCccccCCChHhEEEcCC--CCEEEEeccCceecc
Confidence 788999999999999999999865 899999999988764
|
| >3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.30 E-value=3.5e-12 Score=142.29 Aligned_cols=75 Identities=17% Similarity=0.225 Sum_probs=59.4
Q ss_pred ceEEeeccCCCCCCChHHHHhcCCCHHHHHHHHHHHH--HHHHHhc---------CccccCCCCCCeEEccCCCCceEEE
Q 002031 242 TVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--AHQIYVD---------GFFNGDPHPGNFLVSKDPPHRPILL 310 (977)
Q Consensus 242 ~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~--l~~i~~~---------G~~H~D~hPgNIlv~~~~~g~i~Li 310 (977)
.+|||||++|.+|.++. .....+...+...+.+++ +..+|.. |++|||+||.|||++.+ ++++|+
T Consensus 87 ~~lv~e~~~~g~L~~~l--~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~~~~~~~ivH~Dikp~Nill~~~--~~~kL~ 162 (336)
T 3g2f_A 87 YLLVMEYYPNGSLXKYL--SLHTSDWVSSCRLAHSVTRGLAYLHTELPRGDHYKPAISHRDLNSRNVLVKND--GTCVIS 162 (336)
T ss_dssp EEEEECCCTTCBHHHHH--HHCCBCHHHHHHHHHHHHHHHHHHHCCBCCGGGCBCCEECSSCSGGGEEECTT--SCEEEC
T ss_pred EEEEEecCCCCcHHHHH--hhcccchhHHHHHHHHHHHHHHHHHhhhccccccccceeecccccceEEEcCC--CcEEEe
Confidence 37999999999998874 344455555555444444 7889988 99999999999999865 899999
Q ss_pred ecccccccCH
Q 002031 311 DFGLTKKLSS 320 (977)
Q Consensus 311 DFG~~~~l~~ 320 (977)
|||++..+..
T Consensus 163 DFG~a~~~~~ 172 (336)
T 3g2f_A 163 DFGLSMRLTG 172 (336)
T ss_dssp CCTTCEECSS
T ss_pred eccceeeccc
Confidence 9999987653
|
| >3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=99.30 E-value=1.5e-12 Score=148.29 Aligned_cols=79 Identities=14% Similarity=0.212 Sum_probs=56.0
Q ss_pred CCceEEeeccCCCCCCChHHHHhcCCCHHHHHHHHHHHH--HHHHHhcCccccCCCCCCeEEccCCCCceEEEecccccc
Q 002031 240 SETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKK 317 (977)
Q Consensus 240 ~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~ 317 (977)
...++||||++|.+|.++........+...+...+.++. +..+|..|++|||+||.|||++.+ +.++|+|||+++.
T Consensus 164 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~--~~~kL~DFG~a~~ 241 (373)
T 3c1x_A 164 GSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLASKKFVHRDLAARNCMLDEK--FTVKVADFGLARD 241 (373)
T ss_dssp SCCEEEEECCTTCBHHHHHHCTTCCCBHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTT--CCEEECCC-----
T ss_pred CCeEEEEECCCCCCHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHHHCCEecCccchheEEECCC--CCEEEeecccccc
Confidence 456899999999999887532233355555555555544 889999999999999999999865 8999999999987
Q ss_pred cCH
Q 002031 318 LSS 320 (977)
Q Consensus 318 l~~ 320 (977)
+..
T Consensus 242 ~~~ 244 (373)
T 3c1x_A 242 MYD 244 (373)
T ss_dssp ---
T ss_pred ccc
Confidence 654
|
| >2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A* | Back alignment and structure |
|---|
Probab=99.30 E-value=4.2e-12 Score=145.38 Aligned_cols=140 Identities=16% Similarity=0.212 Sum_probs=93.8
Q ss_pred cccccccccEEEEEEecCCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCcHHHHH
Q 002031 124 TPLATASIAQVHRATLVDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEAE 203 (977)
Q Consensus 124 ~piasaSigqV~~A~l~~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea~ 203 (977)
+.||+|++|.||+|+..+|+.||||+........ .+. -.+.+|++
T Consensus 62 ~~LG~G~fg~Vy~~~~~~~~~vaiK~~~~~~~~~--~~~---------------------------------~~~~~Ei~ 106 (390)
T 2zmd_A 62 KQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADN--QTL---------------------------------DSYRNEIA 106 (390)
T ss_dssp EEEECCSSEEEEEEECTTCCEEEEEEEECTTCCH--HHH---------------------------------HHHHHHHH
T ss_pred EEEccCCCeEEEEEEcCCCCEEEEEEEecccccH--HHH---------------------------------HHHHHHHH
Confidence 6799999999999998889999999986532110 000 02455666
Q ss_pred HHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeee----cCCceEEeeccCCCCCCChHHHHhcCCCHHHHHHHHHHHH-
Q 002031 204 NTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ----SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY- 278 (977)
Q Consensus 204 n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~----~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~- 278 (977)
.+.++.+.. ..|.+++. ....+|||| +.|.+|.++... ...++...+...+.+++
T Consensus 107 ~l~~l~~~~------------------~~iv~~~~~~~~~~~~~lv~E-~~~~~L~~~l~~-~~~~~~~~~~~i~~qi~~ 166 (390)
T 2zmd_A 107 YLNKLQQHS------------------DKIIRLYDYEITDQYIYMVME-CGNIDLNSWLKK-KKSIDPWERKSYWKNMLE 166 (390)
T ss_dssp HHHHHTTTC------------------TTBCCEEEEEECSSEEEEEEE-CCSEEHHHHHHH-CSSCCHHHHHHHHHHHHH
T ss_pred HHHHcccCC------------------CeEEEEEEEEecCCEEEEEEe-cCCCCHHHHHHh-cCCCCHHHHHHHHHHHHH
Confidence 666664310 11233332 345689999 567777766432 22445544444444443
Q ss_pred -HHHHHhcCccccCCCCCCeEEccCCCCceEEEecccccccCHH
Q 002031 279 -AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSSS 321 (977)
Q Consensus 279 -l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~~ 321 (977)
+..+|..|++||||||.|||++ + +.++|+|||++..+...
T Consensus 167 aL~~lH~~~ivHrDlkp~NIll~-~--~~~kl~DFG~a~~~~~~ 207 (390)
T 2zmd_A 167 AVHTIHQHGIVHSDLKPANFLIV-D--GMLKLIDFGIANQMQPD 207 (390)
T ss_dssp HHHHHHTTTCCCCCCCGGGEEES-S--SCEEECCCSSSCCC---
T ss_pred HHHHHHHCCeeecCCCHHHEEEE-C--CeEEEEecCccccccCC
Confidence 7889999999999999999995 3 78999999999887543
|
| >3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 4gsb_A* 4gt3_A* 4gva_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3zu7_A 3zuv_A* 3o71_A 3r63_A 3c9w_A* 2y9q_A* 4fmq_A* ... | Back alignment and structure |
|---|
Probab=99.30 E-value=4.5e-12 Score=143.57 Aligned_cols=139 Identities=14% Similarity=0.139 Sum_probs=95.8
Q ss_pred cccccccccEEEEEEec-CCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCcHHHH
Q 002031 124 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (977)
Q Consensus 124 ~piasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea 202 (977)
+.||+|++|.||+|+.. +|+.||||+.++....... -.+.+|+
T Consensus 33 ~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~------------------------------------~~~~~E~ 76 (364)
T 3qyz_A 33 SYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYC------------------------------------QRTLREI 76 (364)
T ss_dssp EEEEECSSEEEEEEEETTTTEEEEEEEECCTTCHHHH------------------------------------HHHHHHH
T ss_pred EEeecCCCeEEEEEEECCCCeEEEEEEeccccCcHHH------------------------------------HHHHHHH
Confidence 68999999999999974 7899999998753221110 0133455
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeee------cCCceEEeeccCCCCCCChHHHHhcCCCHHHHHHHHHH
Q 002031 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ------SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITR 276 (977)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~------~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~ 276 (977)
+.+.++.+ ...+.+-.++. ....++||||++| +|.++ +....++...+...+.+
T Consensus 77 ~~l~~l~h-----------------~niv~~~~~~~~~~~~~~~~~~iv~e~~~~-~L~~~--l~~~~~~~~~~~~i~~q 136 (364)
T 3qyz_A 77 KILLRFRH-----------------ENIIGINDIIRAPTIEQMKDVYIVQDLMET-DLYKL--LKTQHLSNDHICYFLYQ 136 (364)
T ss_dssp HHHHHCCC-----------------TTBCCCCEEECCSSTTTCCCEEEEEECCSE-EHHHH--HHHCCCCHHHHHHHHHH
T ss_pred HHHHhcCC-----------------CCCccceeEEecCCccccceEEEEEcccCc-CHHHH--HHhCCCCHHHHHHHHHH
Confidence 55555432 01122222221 1345899999987 55544 34455676666666655
Q ss_pred HH--HHHHHhcCccccCCCCCCeEEccCCCCceEEEecccccccCH
Q 002031 277 AY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 320 (977)
Q Consensus 277 ~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 320 (977)
++ +..+|..|++|+|+||+|||++.+ +.++|+|||++.....
T Consensus 137 i~~aL~~LH~~~ivH~Dikp~NIl~~~~--~~~kl~Dfg~a~~~~~ 180 (364)
T 3qyz_A 137 ILRGLKYIHSANVLHRDLKPSNLLLNTT--CDLKICDFGLARVADP 180 (364)
T ss_dssp HHHHHHHHHHTTEECCCCCGGGEEECTT--CCEEECCCTTCEECCG
T ss_pred HHHHHHHHHHCCeecCCCChHhEEECCC--CCEEEEeCcceEecCC
Confidence 55 889999999999999999999865 8999999999987654
|
| >2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.30 E-value=3.3e-12 Score=141.06 Aligned_cols=134 Identities=14% Similarity=0.150 Sum_probs=88.9
Q ss_pred cccccccccEEEEEEecCCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCcHHHHH
Q 002031 124 TPLATASIAQVHRATLVDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEAE 203 (977)
Q Consensus 124 ~piasaSigqV~~A~l~~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea~ 203 (977)
+.||+|++|.||+|+. .++.||||+....... -.|.+|++
T Consensus 14 ~~lg~G~~g~V~~~~~-~~~~vavK~~~~~~~~---------------------------------------~~~~~E~~ 53 (307)
T 2eva_A 14 EVVGRGAFGVVCKAKW-RAKDVAIKQIESESER---------------------------------------KAFIVELR 53 (307)
T ss_dssp EEEECCSSSEEEEEEE-TTEEEEEEECSSTTHH---------------------------------------HHHHHHHH
T ss_pred eEeecCCCceEEEEEE-CCeeEEEEEecChhHH---------------------------------------HHHHHHHH
Confidence 6799999999999997 5889999987532110 02344555
Q ss_pred HHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeee--cCCceEEeeccCCCCCCChHHHHh--cCCCHHHHHHHHHHHH-
Q 002031 204 NTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ--SSETVLILEFMDGIRLNDCESLEA--FGVNKQKVVEEITRAY- 278 (977)
Q Consensus 204 n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~--~~~~vLVmE~i~G~~L~~~~~~~~--~~~~~~~l~~~l~~~~- 278 (977)
.+.++.+ ..|.+++. ....+|||||++|.+|.++..... ...+...+...+.++.
T Consensus 54 ~l~~l~h--------------------p~iv~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~ 113 (307)
T 2eva_A 54 QLSRVNH--------------------PNIVKLYGACLNPVCLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQ 113 (307)
T ss_dssp HHHHCCC--------------------TTBCCEEEBCTTTTEEEEECCTTCBHHHHHHCSSSEECCCHHHHHHHHHHHHH
T ss_pred HHhcCCC--------------------CCcCeEEEEEcCCcEEEEEcCCCCCHHHHHhccCCCCccCHHHHHHHHHHHHH
Confidence 5554421 12333443 355789999999999987643111 1234555555444443
Q ss_pred -HHHHHh---cCccccCCCCCCeEEccCCCCc-eEEEecccccccC
Q 002031 279 -AHQIYV---DGFFNGDPHPGNFLVSKDPPHR-PILLDFGLTKKLS 319 (977)
Q Consensus 279 -l~~i~~---~G~~H~D~hPgNIlv~~~~~g~-i~LiDFG~~~~l~ 319 (977)
+..+|. .|++|+|+||.||+++.+ +. ++|+|||++..+.
T Consensus 114 ~l~~LH~~~~~~ivH~dlkp~NIll~~~--~~~~kl~Dfg~~~~~~ 157 (307)
T 2eva_A 114 GVAYLHSMQPKALIHRDLKPPNLLLVAG--GTVLKICDFGTACDIQ 157 (307)
T ss_dssp HHHHHHTCSSSCCCCCCCSGGGEEEETT--TTEEEECCCCC-----
T ss_pred HHHHHHhCCCCCeecCCCChhHEEEeCC--CCEEEEcccccccccc
Confidence 778888 899999999999999865 55 7999999987654
|
| >2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis} | Back alignment and structure |
|---|
Probab=99.30 E-value=3.4e-12 Score=141.02 Aligned_cols=145 Identities=17% Similarity=0.196 Sum_probs=93.7
Q ss_pred ccccccccccEEEEEEec-CCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCcHHH
Q 002031 123 ETPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSE 201 (977)
Q Consensus 123 ~~piasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~E 201 (977)
.+.||+|++|+||+|+.. +|+.||||+.++..... -. ..+ .+.+|
T Consensus 39 ~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~----~~------------------------~~~------~~~~e 84 (309)
T 2h34_A 39 RRLVGRGGMGDVYEAEDTVRERIVALKLMSETLSSD----PV------------------------FRT------RMQRE 84 (309)
T ss_dssp EEEEEECSSSEEEEEEETTTTEEEEEEECGGGGGGS----HH------------------------HHH------HHHHH
T ss_pred EEEEcCCCCeeEEEEEEcCCCeEEEEEecCcccccC----HH------------------------HHH------HHHHH
Confidence 368999999999999975 78999999976532210 00 000 12334
Q ss_pred HHHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeee-cCCceEEeeccCCCCCCChHHHHhcCCCHHHHHHHHHHHH--
Q 002031 202 AENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY-- 278 (977)
Q Consensus 202 a~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~-- 278 (977)
+..+.++.+ ..-+.+-.++. ....++||||++|.+|.++... ...++...+...+.+++
T Consensus 85 ~~~l~~l~h-----------------p~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~-~~~~~~~~~~~i~~qi~~~ 146 (309)
T 2h34_A 85 ARTAGRLQE-----------------PHVVPIHDFGEIDGQLYVDMRLINGVDLAAMLRR-QGPLAPPRAVAIVRQIGSA 146 (309)
T ss_dssp HHHHTTCCC-----------------TTBCCEEEEEEETTEEEEEEECCCCEEHHHHHHH-HCSCCHHHHHHHHHHHHHH
T ss_pred HHHHhhcCC-----------------CCeeEEEEEEeeCCeEEEEEEecCCCCHHHHHHh-cCCCCHHHHHHHHHHHHHH
Confidence 444333211 11112222222 4566899999999999887542 23466666666555554
Q ss_pred HHHHHhcCccccCCCCCCeEEccCCCCceEEEecccccccCHH
Q 002031 279 AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSSS 321 (977)
Q Consensus 279 l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~~ 321 (977)
+..+|..|++|+|+||.||+++.+ +.++|+|||++......
T Consensus 147 l~~lH~~~i~H~dlkp~NIl~~~~--~~~kl~Dfg~~~~~~~~ 187 (309)
T 2h34_A 147 LDAAHAAGATHRDVKPENILVSAD--DFAYLVDFGIASATTDE 187 (309)
T ss_dssp HHHHHHTTCCCSCCCGGGEEECTT--SCEEECSCCC-------
T ss_pred HHHHHHCcCCcCCCChHHEEEcCC--CCEEEecCccCcccccc
Confidence 888999999999999999999865 89999999998776543
|
| >1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase, splicing, human, 10Z-hymendialdisine, structural genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A* | Back alignment and structure |
|---|
Probab=99.30 E-value=9.1e-12 Score=138.52 Aligned_cols=143 Identities=13% Similarity=0.168 Sum_probs=95.8
Q ss_pred cccccccccEEEEEEe-c-CCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCcHHH
Q 002031 124 TPLATASIAQVHRATL-V-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSE 201 (977)
Q Consensus 124 ~piasaSigqV~~A~l-~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~E 201 (977)
+.||+|++|.||+|+. + +|+.||||+.+..-.. . . .+.+|
T Consensus 20 ~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~-----~---------------------------~------~~~~e 61 (339)
T 1z57_A 20 DTLGEGAFGKVVECIDHKAGGRHVAVKIVKNVDRY-----C---------------------------E------AARSE 61 (339)
T ss_dssp EEEEEETTEEEEEEEETTTTTEEEEEEEECSSHHH-----H---------------------------H------HHHHH
T ss_pred EEEecCCCeEEEEEEecCCCCcEEEEEEEecCCch-----h---------------------------H------HHHHH
Confidence 6799999999999987 3 7899999998643110 0 0 12345
Q ss_pred HHHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceee---e-cCCceEEeeccCCCCCCChHHHHh-cCCCHHHHHHHHHH
Q 002031 202 AENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVI---Q-SSETVLILEFMDGIRLNDCESLEA-FGVNKQKVVEEITR 276 (977)
Q Consensus 202 a~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~---~-~~~~vLVmE~i~G~~L~~~~~~~~-~~~~~~~l~~~l~~ 276 (977)
.+.+..+.+.-. .....+++++ . ....+|||||+ |.+|.+...... ..++...+...+.+
T Consensus 62 ~~~l~~l~~~~~--------------~~~~~i~~~~~~~~~~~~~~lv~e~~-~~~l~~~l~~~~~~~~~~~~~~~~~~q 126 (339)
T 1z57_A 62 IQVLEHLNTTDP--------------NSTFRCVQMLEWFEHHGHICIVFELL-GLSTYDFIKENGFLPFRLDHIRKMAYQ 126 (339)
T ss_dssp HHHHHHHHHHCT--------------TCTTCBCCEEEEEEETTEEEEEEECC-CCBHHHHHHHTTTCCCCHHHHHHHHHH
T ss_pred HHHHHHhhhcCC--------------CCceeeEeeecccccCCcEEEEEcCC-CCCHHHHHHhcCCCCCcHHHHHHHHHH
Confidence 555555554211 1112233333 2 45668999999 777766543221 13556666555555
Q ss_pred HH--HHHHHhcCccccCCCCCCeEEccCC-----------------CCceEEEecccccccC
Q 002031 277 AY--AHQIYVDGFFNGDPHPGNFLVSKDP-----------------PHRPILLDFGLTKKLS 319 (977)
Q Consensus 277 ~~--l~~i~~~G~~H~D~hPgNIlv~~~~-----------------~g~i~LiDFG~~~~l~ 319 (977)
++ +..+|..|++|+|+||+|||++.++ +++++|+|||++....
T Consensus 127 i~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~~~~~~ 188 (339)
T 1z57_A 127 ICKSVNFLHSNKLTHTDLKPENILFVQSDYTEAYNPKIKRDERTLINPDIKVVDFGSATYDD 188 (339)
T ss_dssp HHHHHHHHHHTTEECCCCCGGGEEESCCCEEEEEC----CEEEEESCCCEEECCCSSCEETT
T ss_pred HHHHHHHHHHCCCcCCCCCHHHEEEeccccccccCCccccccccccCCCceEeeCcccccCc
Confidence 54 8889999999999999999998632 4679999999987654
|
| >2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase; 1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A 3nr9_A* | Back alignment and structure |
|---|
Probab=99.30 E-value=5.6e-12 Score=141.31 Aligned_cols=147 Identities=13% Similarity=0.041 Sum_probs=93.9
Q ss_pred cccccccccEEEEEEec-CC-CEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCcHHH
Q 002031 124 TPLATASIAQVHRATLV-DG-RQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSE 201 (977)
Q Consensus 124 ~piasaSigqV~~A~l~-~G-~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~E 201 (977)
+.||+|++|.||+|+.+ ++ +.||||+.+..-... -.+.+|
T Consensus 25 ~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~--------------------------------------~~~~~E 66 (355)
T 2eu9_A 25 GNLGEGTFGKVVECLDHARGKSQVALKIIRNVGKYR--------------------------------------EAARLE 66 (355)
T ss_dssp EEEEEETTEEEEEEEETTTTTEEEEEEEECSCHHHH--------------------------------------HHHHHH
T ss_pred EEeeccCCeEEEEEEecCCCceEEEEEEEcccccch--------------------------------------hHHHHH
Confidence 57999999999999974 44 789999986532100 013345
Q ss_pred HHHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeee-cCCceEEeeccCCCCCCChHHHHhcCCCHHHHHHHHHHHH--
Q 002031 202 AENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY-- 278 (977)
Q Consensus 202 a~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~-- 278 (977)
++.+.++.+.... .....+.+-..+. ....+|||||++|..+..+.......++...+...+.+++
T Consensus 67 ~~~l~~l~~~~~~-----------~~~~~~~~~~~~~~~~~~~lv~e~~~~~l~~~l~~~~~~~~~~~~~~~i~~qi~~~ 135 (355)
T 2eu9_A 67 INVLKKIKEKDKE-----------NKFLCVLMSDWFNFHGHMCIAFELLGKNTFEFLKENNFQPYPLPHVRHMAYQLCHA 135 (355)
T ss_dssp HHHHHHHHHHCTT-----------SCSCBCCEEEEEEETTEEEEEEECCCCBHHHHHHHTTTCCCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHhhcCCC-----------CceeEEEeeeeeeeCCeEEEEEeccCCChHHHHHhccCCCCCHHHHHHHHHHHHHH
Confidence 5666666553210 0000112222222 4567899999966444333211112466666666655555
Q ss_pred HHHHHhcCccccCCCCCCeEEccC-----------------CCCceEEEecccccccC
Q 002031 279 AHQIYVDGFFNGDPHPGNFLVSKD-----------------PPHRPILLDFGLTKKLS 319 (977)
Q Consensus 279 l~~i~~~G~~H~D~hPgNIlv~~~-----------------~~g~i~LiDFG~~~~l~ 319 (977)
+..+|..|++|+|+||+|||++.+ .++.++|+|||++....
T Consensus 136 L~~lH~~~ivH~Dlkp~NIll~~~~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~~~~~~ 193 (355)
T 2eu9_A 136 LRFLHENQLTHTDLKPENILFVNSEFETLYNEHKSCEEKSVKNTSIRVADFGSATFDH 193 (355)
T ss_dssp HHHHHTTTEECCCCCGGGEEESCCCEEEEECCC-CCCEEEESCCCEEECCCTTCEETT
T ss_pred HHHHHHCCcccCCCCHHHEEEecccccccccccccccccccCCCcEEEeecCcccccc
Confidence 889999999999999999999421 24789999999987643
|
| >4exu_A Mitogen-activated protein kinase 13; P38 kinase, transferase; 1.70A {Homo sapiens} PDB: 4eyj_A* 4eym_A* 3coi_A | Back alignment and structure |
|---|
Probab=99.30 E-value=5.4e-12 Score=143.38 Aligned_cols=140 Identities=21% Similarity=0.293 Sum_probs=89.8
Q ss_pred ccccccccccEEEEEEec-CCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCcHHH
Q 002031 123 ETPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSE 201 (977)
Q Consensus 123 ~~piasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~E 201 (977)
.+.||+|++|.||+|+.+ +|+.||||+.+........ . -.+.+|
T Consensus 47 ~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~-----------------------------~------~~~~~E 91 (371)
T 4exu_A 47 PTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIF-----------------------------A------KRAYRE 91 (371)
T ss_dssp EEEEEECSSEEEEEEEETTTTEEEEEEEECSTTSSHHH-----------------------------H------HHHHHH
T ss_pred EeEEecCCCeEEEEEEECCCCCEEEEEEecccccchhH-----------------------------H------HHHHHH
Confidence 367999999999999974 7999999988653321100 0 012345
Q ss_pred HHHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeeec-C------CceEEeeccCCCCCCChHHHHhcCCCHHHHHHHH
Q 002031 202 AENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQS-S------ETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEI 274 (977)
Q Consensus 202 a~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~~-~------~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l 274 (977)
+..+..+.+ ..-+.+-.++.. . ..++||||++| +|.+ .....++...+...+
T Consensus 92 ~~~l~~l~h-----------------~niv~~~~~~~~~~~~~~~~~~~lv~e~~~~-~l~~---~~~~~~~~~~~~~i~ 150 (371)
T 4exu_A 92 LLLLKHMQH-----------------ENVIGLLDVFTPASSLRNFYDFYLVMPFMQT-DLQK---IMGMEFSEEKIQYLV 150 (371)
T ss_dssp HHHHHHCCC-----------------TTBCCCSEEECSCSSSTTCCCCEEEEECCCE-EHHH---HTTSCCCHHHHHHHH
T ss_pred HHHHHhcCC-----------------CCchhhhhheeccCCcccceeEEEEEccccc-cHHH---HhhcCCCHHHHHHHH
Confidence 554444421 111222233321 1 22899999985 3332 223346666666655
Q ss_pred HHHH--HHHHHhcCccccCCCCCCeEEccCCCCceEEEecccccccCH
Q 002031 275 TRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 320 (977)
Q Consensus 275 ~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 320 (977)
.+++ +..+|..|++|+|+||.|||++.+ +.++|+|||++.....
T Consensus 151 ~qi~~aL~~LH~~~ivH~Dikp~NIll~~~--~~~kL~Dfg~a~~~~~ 196 (371)
T 4exu_A 151 YQMLKGLKYIHSAGVVHRDLKPGNLAVNED--CELKILDFGLARHADA 196 (371)
T ss_dssp HHHHHHHHHHHHTTCCCSCCCGGGEEECTT--CCEEECSTTCC-----
T ss_pred HHHHHHHHHHHHCCCcCCCcCHHHeEECCC--CCEEEEecCccccccc
Confidence 5554 888999999999999999999865 8999999999976543
|
| >2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.29 E-value=3.5e-12 Score=140.85 Aligned_cols=148 Identities=17% Similarity=0.098 Sum_probs=99.9
Q ss_pred cccccccccEEEEEEe-cCCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCcHHHH
Q 002031 124 TPLATASIAQVHRATL-VDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (977)
Q Consensus 124 ~piasaSigqV~~A~l-~~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea 202 (977)
+.||+|++|.||+|+. .+|+.||||+.+....... .....+..+.+|.
T Consensus 37 ~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~-------------------------------~~~~~~~~~~~e~ 85 (312)
T 2iwi_A 37 PLLGKGGFGTVFAGHRLTDRLQVAIKVIPRNRVLGW-------------------------------SPLSDSVTCPLEV 85 (312)
T ss_dssp EEEEEETTEEEEEEECTTTCCEEEEEECCSTTTC---------------------------------------CCCCHHH
T ss_pred eEEEcCCCEEEEEEEEccCCeEEEEEEEeccccccc-------------------------------ccchhhHHHHHHH
Confidence 6799999999999987 4799999999864321100 0011233566677
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeee----cCCceEEeec-cCCCCCCChHHHHhcCCCHHHHHHHHHHH
Q 002031 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ----SSETVLILEF-MDGIRLNDCESLEAFGVNKQKVVEEITRA 277 (977)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~----~~~~vLVmE~-i~G~~L~~~~~~~~~~~~~~~l~~~l~~~ 277 (977)
..+.++..... .-.|.+++. ....++|||+ ++|.+|.++... ...++...+...+.++
T Consensus 86 ~~l~~l~~~~~----------------h~~i~~~~~~~~~~~~~~~v~e~~~~~~~L~~~l~~-~~~~~~~~~~~~~~qi 148 (312)
T 2iwi_A 86 ALLWKVGAGGG----------------HPGVIRLLDWFETQEGFMLVLERPLPAQDLFDYITE-KGPLGEGPSRCFFGQV 148 (312)
T ss_dssp HHHHHHHSSCC----------------CSSBCCEEEEC-----CEEEEECCSSEEEHHHHHHH-HCSCCHHHHHHHHHHH
T ss_pred HHHHhhcccCC----------------CCCeeeEEEEEecCCeEEEEEEecCCCCCHHHHHHh-cCCCCHHHHHHHHHHH
Confidence 77777643211 112333332 4567899999 889999877532 2346666666555554
Q ss_pred H--HHHHHhcCccccCCCCCCeEEccCCCCceEEEecccccccCH
Q 002031 278 Y--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 320 (977)
Q Consensus 278 ~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 320 (977)
+ +..+|..|++|+|+||.||+++.+ ++.++|+|||++..+..
T Consensus 149 ~~~l~~lH~~~i~H~dlkp~Nil~~~~-~~~~kl~dfg~~~~~~~ 192 (312)
T 2iwi_A 149 VAAIQHCHSRGVVHRDIKDENILIDLR-RGCAKLIDFGSGALLHD 192 (312)
T ss_dssp HHHHHHHHHHTEECCCCSGGGEEEETT-TTEEEECCCSSCEECCS
T ss_pred HHHHHHHHHCCeeecCCChhhEEEeCC-CCeEEEEEcchhhhccc
Confidence 4 888999999999999999999832 38999999999887653
|
| >2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A* | Back alignment and structure |
|---|
Probab=99.29 E-value=4.6e-12 Score=142.34 Aligned_cols=137 Identities=19% Similarity=0.209 Sum_probs=94.8
Q ss_pred cccccccccEEEEEEec-CCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCcHHHH
Q 002031 124 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (977)
Q Consensus 124 ~piasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea 202 (977)
+.||+|++|.||+|+.+ +|+.||||+.++....... ..+.+|+
T Consensus 17 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~------------------------------------~~~~~E~ 60 (353)
T 2b9h_A 17 SLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFA------------------------------------LRTLREI 60 (353)
T ss_dssp EEEEECSSEEEEEEEETTTTEEEEEEEECCCSSHHHH------------------------------------HHHHHHH
T ss_pred eEEcCCCCeEEEEEEECCCCcEEEEEeecccccchHH------------------------------------HHHHHHH
Confidence 67999999999999975 7999999998654221110 0123455
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeee---------cCCceEEeeccCCCCCCChHHHHhcCCCHHHHHHH
Q 002031 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ---------SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEE 273 (977)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~---------~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~ 273 (977)
+.+.++++ + .|.+++. ....++||||++| +|.+. +....++...+...
T Consensus 61 ~~l~~l~h------------------~--~iv~~~~~~~~~~~~~~~~~~lv~e~~~~-~L~~~--~~~~~~~~~~~~~~ 117 (353)
T 2b9h_A 61 KILKHFKH------------------E--NIITIFNIQRPDSFENFNEVYIIQELMQT-DLHRV--ISTQMLSDDHIQYF 117 (353)
T ss_dssp HHHHHCCC------------------T--TBCCEEEECCCSCSTTCCCEEEEECCCSE-EHHHH--HHHCCCCHHHHHHH
T ss_pred HHHHhCcC------------------C--CcCCeeeeecccccCccceEEEEEeccCc-cHHHH--HhhcCCCHHHHHHH
Confidence 55544421 1 1222221 1456899999986 55554 33445666666666
Q ss_pred HHHHH--HHHHHhcCccccCCCCCCeEEccCCCCceEEEecccccccCHH
Q 002031 274 ITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSSS 321 (977)
Q Consensus 274 l~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~~ 321 (977)
+.+++ +..+|..|++|+|+||+|||++.+ +.++|+|||++..+...
T Consensus 118 ~~qi~~~L~~LH~~~ivH~Dlkp~Nil~~~~--~~~kl~Dfg~a~~~~~~ 165 (353)
T 2b9h_A 118 IYQTLRAVKVLHGSNVIHRDLKPSNLLINSN--CDLKVCDFGLARIIDES 165 (353)
T ss_dssp HHHHHHHHHHHHHTTEECSCCCGGGEEECTT--CCEEECCCTTCEECC--
T ss_pred HHHHHHHHHHHHHCCeecCCCCHHHeEEcCC--CcEEEEecccccccccc
Confidence 65554 888999999999999999999865 89999999999988654
|
| >2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.29 E-value=3.7e-12 Score=139.14 Aligned_cols=142 Identities=13% Similarity=0.046 Sum_probs=93.6
Q ss_pred cccccccccEEEEEEe-cCCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCcHHHH
Q 002031 124 TPLATASIAQVHRATL-VDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (977)
Q Consensus 124 ~piasaSigqV~~A~l-~~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea 202 (977)
..||.|++|+||+|+. .+|+.||||+.+..-.... -.+.+|+
T Consensus 28 ~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~-------------------------------------~~~~~e~ 70 (295)
T 2clq_A 28 VVLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYS-------------------------------------QPLHEEI 70 (295)
T ss_dssp CEEEECSSSEEEEEEETTTCCEEEEEEEECCCC----------------------------------------HHHHHHH
T ss_pred EEEeecCcEEEEEEEECCCCeEEEEEEccCCchHHH-------------------------------------HHHHHHH
Confidence 4799999999999997 4789999998764321100 0123344
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeee-cCCceEEeeccCCCCCCChHHHHhc--CCCHHHHHHHHHHHH-
Q 002031 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAF--GVNKQKVVEEITRAY- 278 (977)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLVmE~i~G~~L~~~~~~~~~--~~~~~~l~~~l~~~~- 278 (977)
..+..+.+ ..-+.+-.++. ....++||||++|.+|.++...... ..+...+...+.+++
T Consensus 71 ~~l~~l~h-----------------~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~ 133 (295)
T 2clq_A 71 ALHKHLKH-----------------KNIVQYLGSFSENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQILE 133 (295)
T ss_dssp HHHHTCCC-----------------TTBCCEEEEEEETTEEEEEEECCSEEEHHHHHHHTTCCCTTCHHHHHHHHHHHHH
T ss_pred HHHHhCCC-----------------CCEeeEeeEEEeCCcEEEEEEeCCCCCHHHHHHhhccCCCccHHHHHHHHHHHHH
Confidence 44433311 01112222222 4556899999999999887543211 233444444343433
Q ss_pred -HHHHHhcCccccCCCCCCeEEccCCCCceEEEecccccccCH
Q 002031 279 -AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 320 (977)
Q Consensus 279 -l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 320 (977)
+..+|..|++|+|+||.||+++.+ ++.++|+|||++..+..
T Consensus 134 ~l~~lH~~~i~H~dl~p~Nil~~~~-~~~~kl~Dfg~~~~~~~ 175 (295)
T 2clq_A 134 GLKYLHDNQIVHRDIKGDNVLINTY-SGVLKISDFGTSKRLAG 175 (295)
T ss_dssp HHHHHHHTTEECCCCSGGGEEEETT-TCCEEECCTTTCEESCC
T ss_pred HHHHHHhCCEEccCCChhhEEEECC-CCCEEEeecccccccCC
Confidence 788999999999999999999862 48999999999987754
|
| >2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.29 E-value=3.6e-12 Score=140.98 Aligned_cols=140 Identities=16% Similarity=0.168 Sum_probs=93.4
Q ss_pred cccccccccEEEEEEe-cCCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCcHHHH
Q 002031 124 TPLATASIAQVHRATL-VDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (977)
Q Consensus 124 ~piasaSigqV~~A~l-~~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea 202 (977)
+.||.|++|.||+|+. .+|+.||||+.+..-... .. .+.+|+
T Consensus 35 ~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~----~~---------------------------------~~~~E~ 77 (317)
T 2buj_A 35 QKLGEGGFSYVDLVEGLHDGHFYALKRILCHEQQD----RE---------------------------------EAQREA 77 (317)
T ss_dssp EEEEC--CEEEEEEEETTTCCEEEEEEEEESSHHH----HH---------------------------------HHHHHH
T ss_pred EEecCCCCeEEEEEEecCCCcEEEEEEEecCCHHH----HH---------------------------------HHHHHH
Confidence 6899999999999997 589999999875432111 00 123444
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeee-----cCCceEEeeccCCCCCCChHHHH---hcCCCHHHHHHHH
Q 002031 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-----SSETVLILEFMDGIRLNDCESLE---AFGVNKQKVVEEI 274 (977)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-----~~~~vLVmE~i~G~~L~~~~~~~---~~~~~~~~l~~~l 274 (977)
..+..+.+ ..-+.+-.++. ....++||||++|.+|.++.... ...++...+...+
T Consensus 78 ~~l~~l~h-----------------~~iv~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~ 140 (317)
T 2buj_A 78 DMHRLFNH-----------------PNILRLVAYCLRERGAKHEAWLLLPFFKRGTLWNEIERLKDKGNFLTEDQILWLL 140 (317)
T ss_dssp HHHHTCCC-----------------TTBCCCCEEEEEEETTEEEEEEEEECCTTCBHHHHHHHHHTTTCCCCHHHHHHHH
T ss_pred HHHhhcCC-----------------CCeeeEEEEEEeccCCCceeEEEEEeCCCCcHHHHHHHHHhcCCCCCHHHHHHHH
Confidence 44443321 00111111111 22457999999999998765431 2335666666666
Q ss_pred HHHH--HHHHHhcCccccCCCCCCeEEccCCCCceEEEecccccccC
Q 002031 275 TRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 319 (977)
Q Consensus 275 ~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~ 319 (977)
.+++ +..+|..|++|+|+||.||+++.+ +.++|+|||++....
T Consensus 141 ~qi~~~L~~LH~~~ivH~dlkp~NIl~~~~--~~~kl~dfg~~~~~~ 185 (317)
T 2buj_A 141 LGICRGLEAIHAKGYAHRDLKPTNILLGDE--GQPVLMDLGSMNQAC 185 (317)
T ss_dssp HHHHHHHHHHHHTTEECCCCCGGGEEECTT--SCEEECCCSSCEESC
T ss_pred HHHHHHHHHHHhCCcccCCCCHHHEEEcCC--CCEEEEecCcchhcc
Confidence 5554 888999999999999999999865 899999999987654
|
| >3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.29 E-value=5.4e-12 Score=142.12 Aligned_cols=140 Identities=20% Similarity=0.275 Sum_probs=91.9
Q ss_pred ccccccccccEEEEEEec-CCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCcHHH
Q 002031 123 ETPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSE 201 (977)
Q Consensus 123 ~~piasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~E 201 (977)
.+.||+|++|.||+|+.+ +|+.||||+.+........ . -.+.+|
T Consensus 29 ~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~-----------------------------~------~~~~~E 73 (353)
T 3coi_A 29 PTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIF-----------------------------A------KRAYRE 73 (353)
T ss_dssp EEEEEECSSEEEEEEEETTTTEEEEEEEESSTTSSHHH-----------------------------H------HHHHHH
T ss_pred eeeEecCCCeEEEEEEECCCCCEEEEEEecccccchHH-----------------------------H------HHHHHH
Confidence 478999999999999974 7999999998653221100 0 012345
Q ss_pred HHHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeeec-------CCceEEeeccCCCCCCChHHHHhcCCCHHHHHHHH
Q 002031 202 AENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQS-------SETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEI 274 (977)
Q Consensus 202 a~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~~-------~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l 274 (977)
+..+.++.+ ..-+.+-.++.. ...++||||++| +|.+.. ...++...+...+
T Consensus 74 ~~~l~~l~h-----------------~~iv~~~~~~~~~~~~~~~~~~~lv~e~~~~-~l~~~~---~~~~~~~~~~~i~ 132 (353)
T 3coi_A 74 LLLLKHMQH-----------------ENVIGLLDVFTPASSLRNFYDFYLVMPFMQT-DLQKIM---GLKFSEEKIQYLV 132 (353)
T ss_dssp HHHHHHCCC-----------------TTBCCCSEEECSCSSGGGCCCCEEEEECCSE-EGGGTT---TSCCCHHHHHHHH
T ss_pred HHHHHhcCC-----------------CCcccHhheEecccccccceeEEEEeccccC-CHHHHh---cCCCCHHHHHHHH
Confidence 554444321 011222222221 234899999986 555442 2345666666655
Q ss_pred HHHH--HHHHHhcCccccCCCCCCeEEccCCCCceEEEecccccccCH
Q 002031 275 TRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 320 (977)
Q Consensus 275 ~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 320 (977)
.+++ +..+|..|++|+|+||+||+++.+ +.++|+|||++...+.
T Consensus 133 ~qi~~al~~LH~~~ivH~dlkp~NIl~~~~--~~~kl~Dfg~~~~~~~ 178 (353)
T 3coi_A 133 YQMLKGLKYIHSAGVVHRDLKPGNLAVNED--CELKILDFGLARHADA 178 (353)
T ss_dssp HHHHHHHHHHHHTTCCCSSCCGGGEEECTT--CCEEECSTTCTTC---
T ss_pred HHHHHHHHHHHHCCcccCCCCHHHEeECCC--CcEEEeecccccCCCC
Confidence 5554 888999999999999999999865 8999999999987643
|
| >3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A* | Back alignment and structure |
|---|
Probab=99.29 E-value=5.8e-12 Score=138.44 Aligned_cols=139 Identities=17% Similarity=0.139 Sum_probs=94.0
Q ss_pred cccccccccEEEEEEe-cCCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCcHHHH
Q 002031 124 TPLATASIAQVHRATL-VDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (977)
Q Consensus 124 ~piasaSigqV~~A~l-~~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea 202 (977)
+.||+|++|.||+|+. .+|+.||||+.+..- . +.+|.
T Consensus 24 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~--~----------------------------------------~~~e~ 61 (299)
T 3m2w_A 24 QVLGLGINGKVLQIFNKRTQEKFALKMLQDCP--K----------------------------------------ARREV 61 (299)
T ss_dssp EEEEEETTEEEEEEEETTTCCEEEEEEEECSH--H----------------------------------------HHHHH
T ss_pred cccccCCCeEEEEEEEcCCCcEEEEEEecccH--H----------------------------------------HHHHH
Confidence 6799999999999997 579999999875321 1 11233
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeee-----cCCceEEeeccCCCCCCChHHHHh-cCCCHHHHHHHHHH
Q 002031 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-----SSETVLILEFMDGIRLNDCESLEA-FGVNKQKVVEEITR 276 (977)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-----~~~~vLVmE~i~G~~L~~~~~~~~-~~~~~~~l~~~l~~ 276 (977)
..+.+.. .+ ...+.+-.++. ....+|||||++|.+|.++..... ..++...+...+.+
T Consensus 62 ~~~~~~~---~h-------------~~i~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~q 125 (299)
T 3m2w_A 62 ELHWRAS---QC-------------PHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKS 125 (299)
T ss_dssp HHHHHHT---TS-------------TTBCCEEEEEEEEETTEEEEEEEECCCCSCBHHHHHHHCTTCCCBHHHHHHHHHH
T ss_pred HHHHHhc---cC-------------CCchhHHhhhhhhcCCCceEEEEEeecCCCcHHHHHHhccCCCCCHHHHHHHHHH
Confidence 3222221 10 01122222221 233589999999999987744221 13666666666665
Q ss_pred HH--HHHHHhcCccccCCCCCCeEEccCC-CCceEEEecccccccCH
Q 002031 277 AY--AHQIYVDGFFNGDPHPGNFLVSKDP-PHRPILLDFGLTKKLSS 320 (977)
Q Consensus 277 ~~--l~~i~~~G~~H~D~hPgNIlv~~~~-~g~i~LiDFG~~~~l~~ 320 (977)
++ +..+|..|++|+|+||.||+++.+. ++.++|+|||++..+..
T Consensus 126 i~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~ 172 (299)
T 3m2w_A 126 IGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTG 172 (299)
T ss_dssp HHHHHHHHHHTTEECCCCSGGGEEESSSSTTCCEEECCCTTCEECTT
T ss_pred HHHHHHHHHhCCcccCCCCHHHEEEecCCCCCcEEEecccccccccc
Confidence 54 8899999999999999999998632 47899999999987754
|
| >3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria, structural GE structural genomics consortium, SGC, transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7} | Back alignment and structure |
|---|
Probab=99.29 E-value=6.2e-12 Score=141.87 Aligned_cols=142 Identities=16% Similarity=0.118 Sum_probs=94.3
Q ss_pred cccccccccEEEEEEe-cCCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCcHHHH
Q 002031 124 TPLATASIAQVHRATL-VDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (977)
Q Consensus 124 ~piasaSigqV~~A~l-~~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea 202 (977)
+.||.|++|.||+|+. .+|+.||||+.+..-... . .+..|+
T Consensus 41 ~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~--~------------------------------------~~~~e~ 82 (360)
T 3llt_A 41 RKMGDGTFGRVLLCQHIDNKKYYAVKVVRNIKKYT--R------------------------------------SAKIEA 82 (360)
T ss_dssp EEEEECSSEEEEEEEETTTCCEEEEEEECSCHHHH--H------------------------------------HHHHHH
T ss_pred EEEcccCCeEEEEEEECCCCeEEEEEEeccchhhh--h------------------------------------hhHHHH
Confidence 6799999999999998 479999999986421100 0 112344
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceee---e-cCCceEEeeccCCCCCCChHHHHh-cCCCHHHHHHHHHHH
Q 002031 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVI---Q-SSETVLILEFMDGIRLNDCESLEA-FGVNKQKVVEEITRA 277 (977)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~---~-~~~~vLVmE~i~G~~L~~~~~~~~-~~~~~~~l~~~l~~~ 277 (977)
..+..+... ......|.+++ . ....+|||||+ |.+|.++..... .+++...+...+.++
T Consensus 83 ~~l~~l~~~---------------~~~h~~iv~~~~~~~~~~~~~lv~e~~-~~~L~~~~~~~~~~~~~~~~~~~i~~qi 146 (360)
T 3llt_A 83 DILKKIQND---------------DINNNNIVKYHGKFMYYDHMCLIFEPL-GPSLYEIITRNNYNGFHIEDIKLYCIEI 146 (360)
T ss_dssp HHHHHTCCC---------------STTGGGBCCEEEEEEETTEEEEEECCC-CCBHHHHHHHTTTCCCCHHHHHHHHHHH
T ss_pred HHHHHhccc---------------CCCCCCeecccceeeECCeeEEEEcCC-CCCHHHHHHhcCCCCCCHHHHHHHHHHH
Confidence 444433210 00011233333 2 45668999999 888877643222 236666666655555
Q ss_pred H--HHHHHhcCccccCCCCCCeEEccC-----------------------CCCceEEEecccccccC
Q 002031 278 Y--AHQIYVDGFFNGDPHPGNFLVSKD-----------------------PPHRPILLDFGLTKKLS 319 (977)
Q Consensus 278 ~--l~~i~~~G~~H~D~hPgNIlv~~~-----------------------~~g~i~LiDFG~~~~l~ 319 (977)
+ +..+|..|++|||+||+|||++.+ .++.++|+|||++...+
T Consensus 147 ~~aL~~LH~~~ivHrDlkp~NIll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DFG~a~~~~ 213 (360)
T 3llt_A 147 LKALNYLRKMSLTHTDLKPENILLDDPYFEKSLITVRRVTDGKKIQIYRTKSTGIKLIDFGCATFKS 213 (360)
T ss_dssp HHHHHHHHHTTEECSCCSGGGEEESCTTCCEEEEEEECTTTCCEEEEEEESCCCEEECCCTTCEETT
T ss_pred HHHHHHHHHCCeeeCCCCcccEEEccccccccccchhcccccccccccccCCCCEEEEeccCceecC
Confidence 4 888999999999999999999741 24789999999987654
|
| >2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ... | Back alignment and structure |
|---|
Probab=99.29 E-value=6.6e-12 Score=142.63 Aligned_cols=139 Identities=17% Similarity=0.256 Sum_probs=88.1
Q ss_pred cccccccccEEEEEEec-CCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCcHHHH
Q 002031 124 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (977)
Q Consensus 124 ~piasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea 202 (977)
+.||+|++|.||+|+.. +|+.||||+.+....... .. -.+.+|+
T Consensus 31 ~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~--~~---------------------------------~~~~~E~ 75 (371)
T 2xrw_A 31 KPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQT--HA---------------------------------KRAYREL 75 (371)
T ss_dssp EEEEECSSEEEEEEEETTTTEEEEEEEEECTTSSHH--HH---------------------------------HHHHHHH
T ss_pred eeeEecCCEEEEEEEECCCCceEEEEEeccccCChH--HH---------------------------------HHHHHHH
Confidence 68999999999999974 799999998864321110 00 0123444
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeeec-------CCceEEeeccCCCCCCChHHHHhcCCCHHHHHHHHH
Q 002031 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQS-------SETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEIT 275 (977)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~~-------~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~ 275 (977)
..+..+.+ ..-+.+-.++.. ...+|||||++| +|.+. -...++...+...+.
T Consensus 76 ~~l~~l~h-----------------pniv~~~~~~~~~~~~~~~~~~~lv~e~~~~-~l~~~---~~~~~~~~~~~~i~~ 134 (371)
T 2xrw_A 76 VLMKCVNH-----------------KNIIGLLNVFTPQKSLEEFQDVYIVMELMDA-NLCQV---IQMELDHERMSYLLY 134 (371)
T ss_dssp HHHHHCCC-----------------TTBCCEEEEECSCCSTTTCCEEEEEEECCSE-EHHHH---HHSCCCHHHHHHHHH
T ss_pred HHHHhcCC-----------------CCccceEEeeccccccccccceEEEEEcCCC-CHHHH---HhhccCHHHHHHHHH
Confidence 44444321 111222233321 145899999987 33332 224466666655555
Q ss_pred HHH--HHHHHhcCccccCCCCCCeEEccCCCCceEEEecccccccCH
Q 002031 276 RAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 320 (977)
Q Consensus 276 ~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 320 (977)
+++ +..+|..|++|+|+||+|||++.+ +.++|+|||++.....
T Consensus 135 qi~~al~~lH~~~ivH~Dlkp~NIl~~~~--~~~kl~Dfg~a~~~~~ 179 (371)
T 2xrw_A 135 QMLCGIKHLHSAGIIHRDLKPSNIVVKSD--CTLKILDFGLARTAGT 179 (371)
T ss_dssp HHHHHHHHHHHTTCCCSCCCGGGEEECTT--SCEEECCCCC------
T ss_pred HHHHHHHHHHHCCeecccCCHHHEEEcCC--CCEEEEEeeccccccc
Confidence 544 888999999999999999999865 8999999999976643
|
| >2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.29 E-value=2.1e-12 Score=141.87 Aligned_cols=144 Identities=13% Similarity=0.128 Sum_probs=93.0
Q ss_pred ccccccccccEEEEEEe-cCCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCcHHH
Q 002031 123 ETPLATASIAQVHRATL-VDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSE 201 (977)
Q Consensus 123 ~~piasaSigqV~~A~l-~~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~E 201 (977)
.+.||+|++|.||+|+. .+|+.||||+.+......... .+-.+.+|
T Consensus 10 ~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~---------------------------------~~~~~~~E 56 (305)
T 2wtk_C 10 GDLLGEGSYGKVKEVLDSETLCRRAVKILKKKKLRRIPN---------------------------------GEANVKKE 56 (305)
T ss_dssp CCEEEECSSCEEEEEEBTTTCCEEEEEEECHHHHHHSTT---------------------------------HHHHHHHH
T ss_pred eeEEecCCCeEEEEEEECCCCcEEEEEEeccccccccch---------------------------------hHHHHHHH
Confidence 36899999999999997 478999999876422111000 01124445
Q ss_pred HHHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeee---cCCceEEeeccCCCCCCChHHH-HhcCCCHHHHHHHHHHH
Q 002031 202 AENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ---SSETVLILEFMDGIRLNDCESL-EAFGVNKQKVVEEITRA 277 (977)
Q Consensus 202 a~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~---~~~~vLVmE~i~G~~L~~~~~~-~~~~~~~~~l~~~l~~~ 277 (977)
++.+.++++ ..-+.+-.++. ....++||||++|. +.+.... ....++...+...+.++
T Consensus 57 ~~~l~~l~h-----------------~~i~~~~~~~~~~~~~~~~lv~e~~~~~-l~~~~~~~~~~~~~~~~~~~~~~qi 118 (305)
T 2wtk_C 57 IQLLRRLRH-----------------KNVIQLVDVLYNEEKQKMYMVMEYCVCG-MQEMLDSVPEKRFPVCQAHGYFCQL 118 (305)
T ss_dssp HHHHTTCCC-----------------TTBCCEEEEEECC---CEEEEEECCSEE-HHHHHHHSTTCSCCHHHHHHHHHHH
T ss_pred HHHHHhcCC-----------------CCeeEEEEEEEcCCCCeEEEEehhccCC-HHHHHHhCcccccCHHHHHHHHHHH
Confidence 554443321 11122223321 23568999999986 3333221 12345555555555554
Q ss_pred H--HHHHHhcCccccCCCCCCeEEccCCCCceEEEecccccccC
Q 002031 278 Y--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 319 (977)
Q Consensus 278 ~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~ 319 (977)
+ +..+|..|++|+|+||.||+++.+ ++++|+|||++..+.
T Consensus 119 ~~al~~LH~~~i~H~dlkp~NIl~~~~--~~~kl~dfg~~~~~~ 160 (305)
T 2wtk_C 119 IDGLEYLHSQGIVHKDIKPGNLLLTTG--GTLKISALGVAEALH 160 (305)
T ss_dssp HHHHHHHHHTTEECSCCSGGGEEECTT--CCEEECCCTTCEECC
T ss_pred HHHHHHHHHCCeeecCCCcccEEEcCC--CcEEeeccccccccC
Confidence 4 888999999999999999999865 899999999998764
|
| >2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A* | Back alignment and structure |
|---|
Probab=99.28 E-value=4.4e-12 Score=137.43 Aligned_cols=143 Identities=19% Similarity=0.200 Sum_probs=96.0
Q ss_pred cccccccccEEEEEEec-CCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCcHHHH
Q 002031 124 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (977)
Q Consensus 124 ~piasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea 202 (977)
+.||+|++|.||+|+.+ +|+.||||+.+......- +. -.+.+|+
T Consensus 12 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~--~~---------------------------------~~~~~e~ 56 (279)
T 2w5a_A 12 YTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEA--EK---------------------------------QMLVSEV 56 (279)
T ss_dssp EEEEECSSSEEEEEEETTTCCEEEEEEEECTTCCHH--HH---------------------------------HHHHHHH
T ss_pred hhccCCCCcEEEEEEECCCCcEEEEEEEEcccCCHH--HH---------------------------------HHHHHHH
Confidence 67999999999999985 799999999865321100 00 0234455
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeee---cCCceEEeeccCCCCCCChHHHHhc---CCCHHHHHHHHHH
Q 002031 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ---SSETVLILEFMDGIRLNDCESLEAF---GVNKQKVVEEITR 276 (977)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~---~~~~vLVmE~i~G~~L~~~~~~~~~---~~~~~~l~~~l~~ 276 (977)
+.+.++.+ ..-+.+-..+. ....++||||++|.+|.++...... .++...+...+.+
T Consensus 57 ~~l~~l~h-----------------~~i~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~ 119 (279)
T 2w5a_A 57 NLLRELKH-----------------PNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQ 119 (279)
T ss_dssp HHHHHCCC-----------------TTBCCEEEEEEEGGGTEEEEEEECCTTEEHHHHHHHHHHTTCCCCHHHHHHHHHH
T ss_pred HHHHhcCC-----------------CCCCeEEEEEecCCCceEEEEEeCCCCCCHHHHHHhhcccCCCCCHHHHHHHHHH
Confidence 55554421 00111112221 3446899999999999887543221 2566666666655
Q ss_pred HH--HHHHHhcC-----ccccCCCCCCeEEccCCCCceEEEecccccccCH
Q 002031 277 AY--AHQIYVDG-----FFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 320 (977)
Q Consensus 277 ~~--l~~i~~~G-----~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 320 (977)
+. +..+|..| ++|+|+||.||+++.+ +.++|+|||++..+..
T Consensus 120 i~~~l~~lH~~~~~~~~ivH~dl~p~NIl~~~~--~~~kl~dfg~~~~~~~ 168 (279)
T 2w5a_A 120 LTLALKECHRRSDGGHTVLHRDLKPANVFLDGK--QNVKLGDFGLARILNH 168 (279)
T ss_dssp HHHHHHHHHHHC------CCCCCSGGGEEECSS--SCEEECCCCHHHHC--
T ss_pred HHHHHHHHhcccCCCCeeEEeccchhhEEEcCC--CCEEEecCchheeecc
Confidence 54 88899999 9999999999999865 8999999999887654
|
| >3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.28 E-value=5.9e-12 Score=144.79 Aligned_cols=151 Identities=15% Similarity=0.186 Sum_probs=90.3
Q ss_pred CCChhhcccccCccccccccccEEEEEEec---CCCEEEEEEecCCh-hhhhHhhHHHHHHHHHHHHhhCCCCCCchhHH
Q 002031 111 GESMGGMFMDFVETPLATASIAQVHRATLV---DGRQVVVKVQHQGI-KTIILEDLKNAKSIVDWIAWAEPQYDFNPIID 186 (977)
Q Consensus 111 g~~~~~~f~~~d~~piasaSigqV~~A~l~---~G~~VAVKv~~p~i-~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~ 186 (977)
...+.+.|+ +..+.||.|++|.||+|+.+ +++.||||+....- ..
T Consensus 15 ~~~~~~~y~-~~g~~lG~G~~g~Vy~~~~~~~~~~~~vaiK~~~~~~~~~------------------------------ 63 (405)
T 3rgf_A 15 RERVEDLFE-YEGCKVGRGTYGHVYKAKRKDGKDDKDYALKQIEGTGISM------------------------------ 63 (405)
T ss_dssp CCCHHHHEE-CSSCCCC-----EEEEEEESSSSCCCCEEEEECSSSSCCH------------------------------
T ss_pred hhhhhhhhh-hcCcEeeecCCeEEEEEEEccCCCCeEEEEEEECCCCCCH------------------------------
Confidence 456777775 44568999999999999975 68899999875321 11
Q ss_pred HHhhhcccccCcHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeee---cCCceEEeeccCCCCCCChHHHHh-
Q 002031 187 EWCKEAPKELDFNSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ---SSETVLILEFMDGIRLNDCESLEA- 262 (977)
Q Consensus 187 e~~~~l~~Eld~~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~---~~~~vLVmE~i~G~~L~~~~~~~~- 262 (977)
.+.+|++.+.++.+ ...+.+-.++. ....+|||||++| +|.+......
T Consensus 64 ----------~~~~E~~~l~~l~h-----------------pniv~~~~~~~~~~~~~~~lv~e~~~~-~l~~~~~~~~~ 115 (405)
T 3rgf_A 64 ----------SACREIALLRELKH-----------------PNVISLQKVFLSHADRKVWLLFDYAEH-DLWHIIKFHRA 115 (405)
T ss_dssp ----------HHHHHHHHHHHCCC-----------------TTBCCCCEEEEETTTTEEEEEEECCSE-EHHHHHHHHHH
T ss_pred ----------HHHHHHHHHHhcCC-----------------CCeeeEeeEEecCCCCeEEEEEeCCCC-CHHHHHHHhcc
Confidence 12345555544422 11122223332 3445899999987 4443322111
Q ss_pred -------cCCCHHHHHHHHHHHH--HHHHHhcCccccCCCCCCeEEcc--CCCCceEEEecccccccCH
Q 002031 263 -------FGVNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSK--DPPHRPILLDFGLTKKLSS 320 (977)
Q Consensus 263 -------~~~~~~~l~~~l~~~~--l~~i~~~G~~H~D~hPgNIlv~~--~~~g~i~LiDFG~~~~l~~ 320 (977)
..++...+...+.+++ +..+|..|++||||||+|||+.. +.++.++|+|||++..+..
T Consensus 116 ~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~~ivH~Dlkp~NIll~~~~~~~~~~kl~Dfg~a~~~~~ 184 (405)
T 3rgf_A 116 SKANKKPVQLPRGMVKSLLYQILDGIHYLHANWVLHRDLKPANILVMGEGPERGRVKIADMGFARLFNS 184 (405)
T ss_dssp HC-------CCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECCSSTTTTCEEECCTTCCC----
T ss_pred ccccccccCCCHHHHHHHHHHHHHHHHHHHhCCEeCCCcCHHHeEEecCCCCCCcEEEEECCCceecCC
Confidence 1245555555555544 88899999999999999999942 1347899999999987654
|
| >2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ... | Back alignment and structure |
|---|
Probab=99.28 E-value=3.7e-12 Score=138.67 Aligned_cols=140 Identities=17% Similarity=0.114 Sum_probs=95.8
Q ss_pred ccccccccccEEEEEEec-CCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCcHHH
Q 002031 123 ETPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSE 201 (977)
Q Consensus 123 ~~piasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~E 201 (977)
.+.||+|++|.||+|+.. +++.||||+..+.....- ..+-.+.+|
T Consensus 19 ~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~----------------------------------~~~~~~~~e 64 (284)
T 2vgo_A 19 GRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKE----------------------------------GVEHQLRRE 64 (284)
T ss_dssp EEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHHT----------------------------------TCHHHHHHH
T ss_pred eheecCCCCeEEEEEEEcCCCcEEEEEEEcccccchH----------------------------------HHHHHHHHH
Confidence 368999999999999975 688999998754211000 000123445
Q ss_pred HHHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceee---e-cCCceEEeeccCCCCCCChHHHHhcCCCHHHHHHHHHHH
Q 002031 202 AENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVI---Q-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRA 277 (977)
Q Consensus 202 a~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~---~-~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~ 277 (977)
++.+.++.+ + .|++++ . ....++||||++|.+|.+.... ...++...+...+.++
T Consensus 65 ~~~l~~l~h------------------~--~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~-~~~~~~~~~~~~~~qi 123 (284)
T 2vgo_A 65 IEIQSHLRH------------------P--NILRMYNYFHDRKRIYLMLEFAPRGELYKELQK-HGRFDEQRSATFMEEL 123 (284)
T ss_dssp HHHHHTCCC------------------T--TBCCEEEEEECSSEEEEEECCCTTEEHHHHHHH-HSSCCHHHHHHHHHHH
T ss_pred HHHHhcCCC------------------C--CEeeEEEEEEcCCEEEEEEEeCCCCcHHHHHHh-cCCCCHHHHHHHHHHH
Confidence 554444321 1 123333 2 4556899999999998776432 2345666655555554
Q ss_pred H--HHHHHhcCccccCCCCCCeEEccCCCCceEEEecccccccC
Q 002031 278 Y--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 319 (977)
Q Consensus 278 ~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~ 319 (977)
+ +..+|..|++|+|+||.||+++.+ +.++|+|||++....
T Consensus 124 ~~~l~~lH~~~i~H~dl~p~Nil~~~~--~~~kl~Dfg~~~~~~ 165 (284)
T 2vgo_A 124 ADALHYCHERKVIHRDIKPENLLMGYK--GELKIADFGWSVHAP 165 (284)
T ss_dssp HHHHHHHHTTTEECCCCSGGGEEECTT--CCEEECCCTTCEECS
T ss_pred HHHHHHHHHCCceecCCCHHHEEEcCC--CCEEEecccccccCc
Confidence 4 788999999999999999999865 899999999986654
|
| >1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B | Back alignment and structure |
|---|
Probab=99.28 E-value=5.7e-12 Score=139.85 Aligned_cols=145 Identities=19% Similarity=0.195 Sum_probs=95.9
Q ss_pred cccccccccEEEEEEe--cCCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCcHHH
Q 002031 124 TPLATASIAQVHRATL--VDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSE 201 (977)
Q Consensus 124 ~piasaSigqV~~A~l--~~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~E 201 (977)
+.||+|++|.||+|+. .+|+.||||+.+...... .....+.+|
T Consensus 17 ~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~-----------------------------------~~~~~~~~e 61 (326)
T 1blx_A 17 AEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEE-----------------------------------GMPLSTIRE 61 (326)
T ss_dssp EEEEEETTEEEEEEEETTTTTEEEEEEEEEEEBCTT-----------------------------------SCBCTHHHH
T ss_pred eeecccccEEEEEEEecCCCCEEEEEEEeccCcccc-----------------------------------cCCchhhHH
Confidence 6899999999999997 368999999876432110 011234455
Q ss_pred HHHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeee------cCCceEEeeccCCCCCCChHHHH-hcCCCHHHHHHHH
Q 002031 202 AENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ------SSETVLILEFMDGIRLNDCESLE-AFGVNKQKVVEEI 274 (977)
Q Consensus 202 a~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~------~~~~vLVmE~i~G~~L~~~~~~~-~~~~~~~~l~~~l 274 (977)
...+..+.. +.+ ..-+.+-.++. ....++||||++| +|.++.... ...++...+...+
T Consensus 62 ~~~l~~l~~-~~h-------------~~i~~~~~~~~~~~~~~~~~~~lv~e~~~~-~L~~~l~~~~~~~~~~~~~~~~~ 126 (326)
T 1blx_A 62 VAVLRHLET-FEH-------------PNVVRLFDVCTVSRTDRETKLTLVFEHVDQ-DLTTYLDKVPEPGVPTETIKDMM 126 (326)
T ss_dssp HHHHHHHHH-TCC-------------TTBCCEEEEEEEEECSSEEEEEEEEECCSC-BHHHHHHHSCTTCSCHHHHHHHH
T ss_pred HHHHHhhhc-cCC-------------CCeEeeeeeeeecccCCCceEEEEEecCCC-CHHHHHHhcccCCCCHHHHHHHH
Confidence 555555542 110 01111222221 2345899999996 666553221 1235666666655
Q ss_pred HHHH--HHHHHhcCccccCCCCCCeEEccCCCCceEEEecccccccCH
Q 002031 275 TRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 320 (977)
Q Consensus 275 ~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 320 (977)
.+++ +..+|..|++|+|+||+||+++.+ +.++|+|||++..++.
T Consensus 127 ~qi~~~l~~lH~~gi~H~dlkp~Nili~~~--~~~kl~Dfg~~~~~~~ 172 (326)
T 1blx_A 127 FQLLRGLDFLHSHRVVHRDLKPQNILVTSS--GQIKLADFGLARIYSF 172 (326)
T ss_dssp HHHHHHHHHHHHTTCCCCCCCGGGEEECTT--CCEEECSCCSCCCCCG
T ss_pred HHHHHHHHHHHHCCceeccCCHHHeEEcCC--CCEEEecCcccccccC
Confidence 5554 888999999999999999999865 8999999999987754
|
| >3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=99.28 E-value=5.7e-12 Score=137.87 Aligned_cols=142 Identities=11% Similarity=0.094 Sum_probs=93.7
Q ss_pred cccccccccEEEEEEec-C---CCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCcH
Q 002031 124 TPLATASIAQVHRATLV-D---GRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFN 199 (977)
Q Consensus 124 ~piasaSigqV~~A~l~-~---G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~ 199 (977)
+.||+|++|.||+|+.. + +..||||+......... . + .+.
T Consensus 27 ~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~---~-----------------------~----------~~~ 70 (298)
T 3pls_A 27 RVIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRITEMQQ---V-----------------------E----------AFL 70 (298)
T ss_dssp EEEEEETTEEEEEEEEECSSSCEEEEEEEEETTCCSHHH---H-----------------------H----------HHH
T ss_pred ceeccCCCceEEEEEEecCCCceeeeeeeeccccccHHH---H-----------------------H----------HHH
Confidence 67999999999999863 3 33799998754222110 0 0 233
Q ss_pred HHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeee-c-CCceEEeeccCCCCCCChHHHHhcCCCHHHHHHHHHHH
Q 002031 200 SEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-S-SETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRA 277 (977)
Q Consensus 200 ~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~-~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~ 277 (977)
+|+..+.++.+ ..-+.+-.++. . ...++||||+.|.+|.+.........+...+...+.++
T Consensus 71 ~E~~~l~~l~h-----------------~~iv~~~~~~~~~~~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~i~~qi 133 (298)
T 3pls_A 71 REGLLMRGLNH-----------------PNVLALIGIMLPPEGLPHVLLPYMCHGDLLQFIRSPQRNPTVKDLISFGLQV 133 (298)
T ss_dssp HHHHHHHTCCC-----------------TTBCCCCEEECCSSSCCEEEECCCTTCBHHHHHHCTTCCCBHHHHHHHHHHH
T ss_pred HHHHHHHhCCC-----------------CCeeeEEEEEecCCCCcEEEEecccCCCHHHHHhccccCCCHHHHHHHHHHH
Confidence 45544444321 01122222222 2 22389999999999887643223345556555555554
Q ss_pred H--HHHHHhcCccccCCCCCCeEEccCCCCceEEEecccccccCH
Q 002031 278 Y--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 320 (977)
Q Consensus 278 ~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 320 (977)
+ +..+|..|++|+|+||+||+++.+ +.++|+|||++..+..
T Consensus 134 ~~~l~~LH~~~i~H~dikp~Nili~~~--~~~kl~Dfg~~~~~~~ 176 (298)
T 3pls_A 134 ARGMEYLAEQKFVHRDLAARNCMLDES--FTVKVADFGLARDILD 176 (298)
T ss_dssp HHHHHHHHHTTCCCSCCSGGGEEECTT--CCEEECCTTSSCTTTT
T ss_pred HHHHHHHHhCCcccCCCCcceEEEcCC--CcEEeCcCCCcccccC
Confidence 4 888999999999999999999855 8999999999986643
|
| >3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A* | Back alignment and structure |
|---|
Probab=99.28 E-value=4.1e-12 Score=140.32 Aligned_cols=143 Identities=20% Similarity=0.213 Sum_probs=89.1
Q ss_pred cccccccccEEEEEEec----CCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCcH
Q 002031 124 TPLATASIAQVHRATLV----DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFN 199 (977)
Q Consensus 124 ~piasaSigqV~~A~l~----~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~ 199 (977)
+.||+|++|.||+|+.. +++.||||+.+......- +. + .+.
T Consensus 40 ~~lg~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~~~~--~~-----------------------~----------~~~ 84 (313)
T 3brb_A 40 KILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQR--EI-----------------------E----------EFL 84 (313)
T ss_dssp EEEEC-CCCCEEEEEEECTTSCEEEEEEEEC---CCCHH--HH-----------------------H----------HHH
T ss_pred cceeecCCeEEEEEEEeccCCceeEEEEEEEeccccchh--HH-----------------------H----------HHH
Confidence 67999999999999874 456899998764321110 00 0 234
Q ss_pred HHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeee-c-----CCceEEeeccCCCCCCChHHHH-----hcCCCHH
Q 002031 200 SEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-S-----SETVLILEFMDGIRLNDCESLE-----AFGVNKQ 268 (977)
Q Consensus 200 ~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~-----~~~vLVmE~i~G~~L~~~~~~~-----~~~~~~~ 268 (977)
+|++.+.++.+ ..-+.+-.++. . ...++||||++|.+|.++.... ...++..
T Consensus 85 ~e~~~l~~l~h-----------------~~iv~~~~~~~~~~~~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~ 147 (313)
T 3brb_A 85 SEAACMKDFSH-----------------PNVIRLLGVCIEMSSQGIPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQ 147 (313)
T ss_dssp HHHHHHHTCCC-----------------TTBCCCCEEEEC-------CEEEEEECCTTCBHHHHHHHTTBTTSCCCCCHH
T ss_pred HHHHHHhcCCC-----------------CCeeeeeEEEeeccccCCcccEEEEecccCCCHHHHHHHhhhhcCCccCCHH
Confidence 45555444421 01112222222 1 1338999999999998764321 1235566
Q ss_pred HHHHHHHHHH--HHHHHhcCccccCCCCCCeEEccCCCCceEEEecccccccCH
Q 002031 269 KVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 320 (977)
Q Consensus 269 ~l~~~l~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 320 (977)
.+...+.+++ +..+|..|++|+|+||.||+++.+ +.++|+|||++..+..
T Consensus 148 ~~~~i~~qi~~aL~~LH~~~ivH~dikp~NIli~~~--~~~kl~Dfg~~~~~~~ 199 (313)
T 3brb_A 148 TLLKFMVDIALGMEYLSNRNFLHRDLAARNCMLRDD--MTVCVADFGLSKKIYS 199 (313)
T ss_dssp HHHHHHHHHHHHHHHHHTTTCCCCCCSGGGEEECTT--SCEEECSCSCC-----
T ss_pred HHHHHHHHHHHHHHHHHhCCcccCCCCcceEEEcCC--CcEEEeecCcceeccc
Confidence 6666665554 888999999999999999999865 8999999999987654
|
| >2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A | Back alignment and structure |
|---|
Probab=99.28 E-value=5.9e-12 Score=138.56 Aligned_cols=142 Identities=16% Similarity=0.229 Sum_probs=95.8
Q ss_pred cccccccccEEEEEEec-CCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCcHHHH
Q 002031 124 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (977)
Q Consensus 124 ~piasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea 202 (977)
+.||.|++|+||+|+.+ +|+.||||+.+...... +-.+.+|.
T Consensus 15 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~-------------------------------------~~~~~~e~ 57 (304)
T 2jam_A 15 EVLGSGAFSEVFLVKQRLTGKLFALKCIKKSPAFR-------------------------------------DSSLENEI 57 (304)
T ss_dssp EEEEECSSEEEEEEEETTTCCEEEEEEEECC-------------------------------------------HHHHHH
T ss_pred eeccCCCCceEEEEEECCCCCEEEEEEEecccccc-------------------------------------hHHHHHHH
Confidence 67999999999999985 89999999886432100 00233455
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeee-cCCceEEeeccCCCCCCChHHHHhcCCCHHHHHHHHHHHH--H
Q 002031 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--A 279 (977)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~--l 279 (977)
..+.++.+ ..-+.+-.++. ....++||||++|.+|.+... ....++...+...+.+++ +
T Consensus 58 ~~l~~l~h-----------------~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~-~~~~~~~~~~~~~~~qi~~~l 119 (304)
T 2jam_A 58 AVLKKIKH-----------------ENIVTLEDIYESTTHYYLVMQLVSGGELFDRIL-ERGVYTEKDASLVIQQVLSAV 119 (304)
T ss_dssp HHHHHCCC-----------------TTBCCEEEEEECSSEEEEEECCCCSCBHHHHHH-HHSCCCHHHHHHHHHHHHHHH
T ss_pred HHHHhCCC-----------------CCeeehhhhcccCCEEEEEEEcCCCccHHHHHH-HcCCCCHHHHHHHHHHHHHHH
Confidence 55554421 11122222232 455689999999999877643 233456666555555544 8
Q ss_pred HHHHhcCccccCCCCCCeEEcc-CCCCceEEEecccccccCH
Q 002031 280 HQIYVDGFFNGDPHPGNFLVSK-DPPHRPILLDFGLTKKLSS 320 (977)
Q Consensus 280 ~~i~~~G~~H~D~hPgNIlv~~-~~~g~i~LiDFG~~~~l~~ 320 (977)
..+|..|++|+|+||.||++.. +.++.++|+|||++.....
T Consensus 120 ~~lH~~~i~H~dikp~NIl~~~~~~~~~~kl~Dfg~~~~~~~ 161 (304)
T 2jam_A 120 KYLHENGIVHRDLKPENLLYLTPEENSKIMITDFGLSKMEQN 161 (304)
T ss_dssp HHHHHTTCCCCSCCGGGCEESSSSTTCCEEBCSCSTTCCCCC
T ss_pred HHHHHCCccccCCCHHHEEEecCCCCCCEEEccCCcceecCC
Confidence 8899999999999999999932 1347899999999876543
|
| >2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.28 E-value=4e-12 Score=140.35 Aligned_cols=77 Identities=17% Similarity=0.274 Sum_probs=57.2
Q ss_pred CCceEEeeccCCCCCCChHHHHhcCCCHHHHHHHHHHHH--HHHHHhcCccccCCCCCCeEEccCCCCceEEEecccccc
Q 002031 240 SETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKK 317 (977)
Q Consensus 240 ~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~ 317 (977)
...++||||++| +|.++ +....+....+...+.+++ +..+|..|++|+|+||.||+++.+ ++.++|+|||++..
T Consensus 95 ~~~~lv~e~~~~-~L~~~--~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~~-~~~~kl~Dfg~~~~ 170 (320)
T 2i6l_A 95 NSVYIVQEYMET-DLANV--LEQGPLLEEHARLFMYQLLRGLKYIHSANVLHRDLKPANLFINTE-DLVLKIGDFGLARI 170 (320)
T ss_dssp SEEEEEEECCSE-EHHHH--HTTCCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCSGGGEEEETT-TTEEEECCCTTCBC
T ss_pred CceeEEeeccCC-CHHHH--hhcCCccHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEEcCC-CCeEEEccCccccc
Confidence 345899999986 66655 3334455555555555544 888999999999999999999743 37899999999987
Q ss_pred cCH
Q 002031 318 LSS 320 (977)
Q Consensus 318 l~~ 320 (977)
+..
T Consensus 171 ~~~ 173 (320)
T 2i6l_A 171 MDP 173 (320)
T ss_dssp C--
T ss_pred cCC
Confidence 754
|
| >2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A* | Back alignment and structure |
|---|
Probab=99.28 E-value=7.3e-12 Score=139.60 Aligned_cols=139 Identities=16% Similarity=0.143 Sum_probs=96.5
Q ss_pred cccccccccEEEEEEec-CC-----CEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccC
Q 002031 124 TPLATASIAQVHRATLV-DG-----RQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELD 197 (977)
Q Consensus 124 ~piasaSigqV~~A~l~-~G-----~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld 197 (977)
+.||.|++|.||+|+.. +| +.||||+.+........ -.
T Consensus 52 ~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~------------------------------------~~ 95 (333)
T 2i1m_A 52 KTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEK------------------------------------EA 95 (333)
T ss_dssp EEEEECSSEEEEEEEETTCSSSCCCCEEEEEEECTTCCHHHH------------------------------------HH
T ss_pred eEeccCCCcceEEEEecCCCcccchhHHHHHhcccccChHHH------------------------------------HH
Confidence 67999999999999974 33 48999998754321100 02
Q ss_pred cHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeee----cCCceEEeeccCCCCCCChHHHHh-----------
Q 002031 198 FNSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ----SSETVLILEFMDGIRLNDCESLEA----------- 262 (977)
Q Consensus 198 ~~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~----~~~~vLVmE~i~G~~L~~~~~~~~----------- 262 (977)
+.+|++.+.++.+ + ..|++++. ....+|||||++|.+|.++.....
T Consensus 96 ~~~E~~~l~~l~~-----------------h--~~iv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~ 156 (333)
T 2i1m_A 96 LMSELKIMSHLGQ-----------------H--ENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAI 156 (333)
T ss_dssp HHHHHHHHHHHCC-----------------C--TTBCCEEEEECSSSSCEEEEECCTTEEHHHHHHHHHHHHSCC-----
T ss_pred HHHHHHHHHhhcC-----------------C--CCeeeEEEEEecCCceEEEEecCCCCcHHHHHHHhcccccccccccc
Confidence 3456666655521 1 12333332 456789999999999988754321
Q ss_pred --cCCCHHHHHHHHHHHH--HHHHHhcCccccCCCCCCeEEccCCCCceEEEecccccccC
Q 002031 263 --FGVNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 319 (977)
Q Consensus 263 --~~~~~~~l~~~l~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~ 319 (977)
..++...+...+.+++ +..+|..|++|+|+||.|||++.+ +.++|+|||++..+.
T Consensus 157 ~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dlkp~NIl~~~~--~~~kl~Dfg~~~~~~ 215 (333)
T 2i1m_A 157 ANSTASTRDLLHFSSQVAQGMAFLASKNCIHRDVAARNVLLTNG--HVAKIGDFGLARDIM 215 (333)
T ss_dssp --CCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGCEEEGG--GEEEBCCCGGGCCGG
T ss_pred cccccCHHHHHHHHHHHHHHHHHHhcCCcccCCcccceEEECCC--CeEEECccccccccc
Confidence 1245555555555544 888999999999999999999865 899999999998653
|
| >3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A* | Back alignment and structure |
|---|
Probab=99.28 E-value=2.6e-12 Score=143.45 Aligned_cols=143 Identities=17% Similarity=0.140 Sum_probs=92.4
Q ss_pred cccccccccEEEEEEe-cCCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCcHHHH
Q 002031 124 TPLATASIAQVHRATL-VDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (977)
Q Consensus 124 ~piasaSigqV~~A~l-~~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea 202 (977)
+.||+|++|.||+|+. .+|+.||||+.+......- ..-.+.+|+
T Consensus 40 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~-----------------------------------~~~~~~~E~ 84 (329)
T 3gbz_A 40 TKLGEGTYGEVYKAIDTVTNETVAIKRIRLEHEEEG-----------------------------------VPGTAIREV 84 (329)
T ss_dssp EEEEECSSSEEEEEEETTTTEEEEEEECCCCC-------------------------------------------CHHHH
T ss_pred EEEEecCCeEEEEEEECCCCceEEEEEEcccccccc-----------------------------------cchhHHHHH
Confidence 6799999999999997 4899999998864322110 001234555
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeee-cCCceEEeeccCCCCCCChHHHHhcCCCHHHHHHHHHHHH--H
Q 002031 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--A 279 (977)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~--l 279 (977)
+.+.++.+ ..-+.+-.++. ....+|||||++| +|.++.. ....++...+...+.+++ +
T Consensus 85 ~~l~~l~h-----------------~~iv~~~~~~~~~~~~~lv~e~~~~-~L~~~~~-~~~~~~~~~~~~i~~ql~~~l 145 (329)
T 3gbz_A 85 SLLKELQH-----------------RNIIELKSVIHHNHRLHLIFEYAEN-DLKKYMD-KNPDVSMRVIKSFLYQLINGV 145 (329)
T ss_dssp HHGGGCCC-----------------TTBCCEEEEEEETTEEEEEEECCSE-EHHHHHH-HCTTCCHHHHHHHHHHHHHHH
T ss_pred HHHHHcCC-----------------CCcceEEEEEecCCEEEEEEecCCC-CHHHHHh-hcCCCCHHHHHHHHHHHHHHH
Confidence 55444321 11122222332 4566899999997 6655532 222456665555555544 8
Q ss_pred HHHHhcCccccCCCCCCeEEccC---CCCceEEEecccccccCH
Q 002031 280 HQIYVDGFFNGDPHPGNFLVSKD---PPHRPILLDFGLTKKLSS 320 (977)
Q Consensus 280 ~~i~~~G~~H~D~hPgNIlv~~~---~~g~i~LiDFG~~~~l~~ 320 (977)
..+|..|++|+|+||.|||++.+ ..+.++|+|||++..+..
T Consensus 146 ~~LH~~~ivH~Dlkp~NIll~~~~~~~~~~~kl~Dfg~a~~~~~ 189 (329)
T 3gbz_A 146 NFCHSRRCLHRDLKPQNLLLSVSDASETPVLKIGDFGLARAFGI 189 (329)
T ss_dssp HHHHHTTCCCSCCCGGGEEEEC-----CCEEEECCTTHHHHHC-
T ss_pred HHHHhCCEECCCCCHHHEEEecCCCCccceEEECcCCCccccCC
Confidence 88999999999999999999632 235699999999876653
|
| >3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.28 E-value=3.4e-12 Score=142.43 Aligned_cols=81 Identities=21% Similarity=0.167 Sum_probs=60.2
Q ss_pred cCCceEEeeccCCCCCCChHHHHhcCCCHHHHHHHHHHHH--HHHHHhcCccccCCCCCCeEEccCCCCceEEEeccccc
Q 002031 239 SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTK 316 (977)
Q Consensus 239 ~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~ 316 (977)
....+++|||++|.+|.+........++...+...+.+++ +..+|..|++|+|+||.|||++.+ +.++|+|||++.
T Consensus 88 ~~~~~~v~~~~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dikp~NIl~~~~--~~~kL~DfG~a~ 165 (327)
T 3lzb_A 88 TSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTP--QHVKITDFGLAK 165 (327)
T ss_dssp SSSEEEEECCCSSCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEEET--TEEEECCTTC--
T ss_pred cCCceEEEEecCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhhCCCcCCCCCHHHEEEcCC--CCEEEccCccee
Confidence 5567899999999998877543334466666666666655 889999999999999999999866 899999999998
Q ss_pred ccCHH
Q 002031 317 KLSSS 321 (977)
Q Consensus 317 ~l~~~ 321 (977)
.+...
T Consensus 166 ~~~~~ 170 (327)
T 3lzb_A 166 LLGAE 170 (327)
T ss_dssp -----
T ss_pred EccCc
Confidence 77543
|
| >3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A* | Back alignment and structure |
|---|
Probab=99.27 E-value=4.8e-12 Score=149.20 Aligned_cols=144 Identities=17% Similarity=0.182 Sum_probs=98.2
Q ss_pred cccccccccEEEEEEec-CCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCcHHHH
Q 002031 124 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (977)
Q Consensus 124 ~piasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea 202 (977)
+.||.|++|.||+|+.+ +|+.||||+.+...... . ..-.+.+|+
T Consensus 28 ~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~--~---------------------------------~~~~~~~E~ 72 (486)
T 3mwu_A 28 CMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKN--K---------------------------------DTSTILREV 72 (486)
T ss_dssp EEEECCSSSEEEEEEETTTCCEEEEEEEEHHHHBC--S---------------------------------CHHHHHHHH
T ss_pred EEEeecCCEEEEEEEECCCCCEEEEEEEecccccc--h---------------------------------HHHHHHHHH
Confidence 67999999999999985 89999999875321100 0 001234565
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeee-cCCceEEeeccCCCCCCChHHHHhcCCCHHHHHHHHHHHH--H
Q 002031 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--A 279 (977)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~--l 279 (977)
+.+.++.+ ...+.+-.++. ....++||||++|.+|.+... ....++...+...+.+++ +
T Consensus 73 ~~l~~l~h-----------------pniv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~-~~~~~~~~~~~~i~~qi~~al 134 (486)
T 3mwu_A 73 ELLKKLDH-----------------PNIMKLFEILEDSSSFYIVGELYTGGELFDEII-KRKRFSEHDAARIIKQVFSGI 134 (486)
T ss_dssp HHHHHCCC-----------------TTBCCEEEEEECSSEEEEEECCCCSCBHHHHHH-HHSSCCHHHHHHHHHHHHHHH
T ss_pred HHHHhCCC-----------------CCcCeEEEEEEcCCEEEEEEEcCCCCcHHHHHH-hcCCCCHHHHHHHHHHHHHHH
Confidence 55555422 11122222333 455689999999999876543 234566666666555554 8
Q ss_pred HHHHhcCccccCCCCCCeEEccC-CCCceEEEecccccccCH
Q 002031 280 HQIYVDGFFNGDPHPGNFLVSKD-PPHRPILLDFGLTKKLSS 320 (977)
Q Consensus 280 ~~i~~~G~~H~D~hPgNIlv~~~-~~g~i~LiDFG~~~~l~~ 320 (977)
..+|..|++|||+||.|||++.. .++.++|+|||++..+..
T Consensus 135 ~~lH~~~ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~ 176 (486)
T 3mwu_A 135 TYMHKHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQ 176 (486)
T ss_dssp HHHHHTTCCCSCCSGGGEEESSSSTTCCEEECSCSCTTTBCC
T ss_pred HHHHHCCeEeccCchHHEEEecCCCCCCEEEEECCcCeECCC
Confidence 88999999999999999999643 236799999999987654
|
| >1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase, alternative splicing, ATP-binding, chromosome partition, differentiation, mRNA processing; 1.73A {Homo sapiens} PDB: 1wbp_A* 3beg_A* 2x7g_A* | Back alignment and structure |
|---|
Probab=99.27 E-value=6.8e-12 Score=143.02 Aligned_cols=129 Identities=13% Similarity=0.065 Sum_probs=81.7
Q ss_pred cccccccccEEEEEEe-cCCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCcHHHH
Q 002031 124 TPLATASIAQVHRATL-VDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (977)
Q Consensus 124 ~piasaSigqV~~A~l-~~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea 202 (977)
+.||+|++|+||+|+. .+|+.||||+.+..-... -.+.+|+
T Consensus 43 ~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~--------------------------------------~~~~~E~ 84 (397)
T 1wak_A 43 RKLGWGHFSTVWLSWDIQGKKFVAMKVVKSAEHYT--------------------------------------ETALDEI 84 (397)
T ss_dssp EEEEECSSEEEEEEEETTTTEEEEEEEECSCHHHH--------------------------------------HHHHHHH
T ss_pred EEeeecCCeeEEEEEecCCCeEEEEEEEecCCcch--------------------------------------HHHHHHH
Confidence 6799999999999987 478999999986531100 0134566
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeee--------cCCceEEeeccCCCCCCChHHHHhcCCCHHHHHHHH
Q 002031 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ--------SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEI 274 (977)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~--------~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l 274 (977)
+.+.++++.... ......|.+++. ....+|||||+.|..+..+......+++...+...+
T Consensus 85 ~~l~~l~~~~~~------------~~~~~~iv~~~~~~~~~~~~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~i~ 152 (397)
T 1wak_A 85 RLLKSVRNSDPN------------DPNREMVVQLLDDFKISGVNGTHICMVFEVLGHHLLKWIIKSNYQGLPLPCVKKII 152 (397)
T ss_dssp HHHHHHHHSCTT------------CGGGGGBCCEEEEEEEEETTEEEEEEEECCCCCBHHHHHHHTTTSCCCHHHHHHHH
T ss_pred HHHHHHhhcCCC------------CCCcceeeeeecceeecCCCCceEEEEEeccCccHHHHHHhcccCCCCHHHHHHHH
Confidence 666666542110 000112222221 234689999996654443322111346666666655
Q ss_pred HHHH--HHHHHhc-CccccCCCCCCeEEccC
Q 002031 275 TRAY--AHQIYVD-GFFNGDPHPGNFLVSKD 302 (977)
Q Consensus 275 ~~~~--l~~i~~~-G~~H~D~hPgNIlv~~~ 302 (977)
.+++ +..+|.. |++|||+||+|||++.+
T Consensus 153 ~qi~~aL~~lH~~~givHrDikp~NIll~~~ 183 (397)
T 1wak_A 153 QQVLQGLDYLHTKCRIIHTDIKPENILLSVN 183 (397)
T ss_dssp HHHHHHHHHHHHTTCEECCCCSGGGEEECCC
T ss_pred HHHHHHHHHHHHhCCEecCCCCHHHeeEecc
Confidence 5554 8889998 99999999999999854
|
| >3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.27 E-value=3.5e-12 Score=142.91 Aligned_cols=148 Identities=17% Similarity=0.129 Sum_probs=95.8
Q ss_pred cccccccccEEEEEEe-cCCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCcHHHH
Q 002031 124 TPLATASIAQVHRATL-VDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (977)
Q Consensus 124 ~piasaSigqV~~A~l-~~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea 202 (977)
+.||+|++|.||+|+. .+|+.||||+.+......- ... .-...-.+.+|+
T Consensus 30 ~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~------------------------~~~-----~~~~~~~~~~E~ 80 (335)
T 3dls_A 30 SPLGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLED------------------------CWI-----EDPKLGKVTLEI 80 (335)
T ss_dssp EECSSSSSCSEEEEEETTTTEEEEEEEEESTTSCTT------------------------SEE-----EETTTEEEEHHH
T ss_pred eEEEecCCEEEEEEEECCCCcEEEEEEEehhhcccc------------------------ccc-----chHHHHHHHHHH
Confidence 6899999999999996 4799999999865421000 000 000111345566
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeee-cCCceEEeeccCCC-CCCChHHHHhcCCCHHHHHHHHHHHH--
Q 002031 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGI-RLNDCESLEAFGVNKQKVVEEITRAY-- 278 (977)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLVmE~i~G~-~L~~~~~~~~~~~~~~~l~~~l~~~~-- 278 (977)
+.+.++.+ ..-+.+-.++. ....++||||+.+. +|.++.. ....++...+...+.+++
T Consensus 81 ~~l~~l~h-----------------~~Iv~~~~~~~~~~~~~lv~e~~~~g~~l~~~~~-~~~~l~~~~~~~i~~qi~~~ 142 (335)
T 3dls_A 81 AILSRVEH-----------------ANIIKVLDIFENQGFFQLVMEKHGSGLDLFAFID-RHPRLDEPLASYIFRQLVSA 142 (335)
T ss_dssp HHHTTCCC-----------------TTBCCEEEEEECSSEEEEEEECCTTSCBHHHHHH-TCCCCCHHHHHHHHHHHHHH
T ss_pred HHHHhCCC-----------------CCEeeEEEEEeeCCEEEEEEEeCCCCccHHHHHH-hcCCCCHHHHHHHHHHHHHH
Confidence 65554421 11122222222 45568999998544 7665532 122456665555555544
Q ss_pred HHHHHhcCccccCCCCCCeEEccCCCCceEEEecccccccCH
Q 002031 279 AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 320 (977)
Q Consensus 279 l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 320 (977)
+..+|..|++|+|+||.|||++.+ +.++|+|||++..+..
T Consensus 143 L~~LH~~~ivH~Dlkp~NIll~~~--~~~kL~Dfg~a~~~~~ 182 (335)
T 3dls_A 143 VGYLRLKDIIHRDIKDENIVIAED--FTIKLIDFGSAAYLER 182 (335)
T ss_dssp HHHHHHTTEECSCCSGGGEEECTT--SCEEECCCTTCEECCT
T ss_pred HHHHHhCCeEEeccCHHHEEEcCC--CcEEEeecccceECCC
Confidence 888999999999999999999865 8999999999987653
|
| >3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A | Back alignment and structure |
|---|
Probab=99.26 E-value=9.2e-12 Score=135.61 Aligned_cols=140 Identities=12% Similarity=0.150 Sum_probs=83.3
Q ss_pred cccccccccEEEEEEe-cCCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCcHHHH
Q 002031 124 TPLATASIAQVHRATL-VDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (977)
Q Consensus 124 ~piasaSigqV~~A~l-~~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea 202 (977)
+.||.|++|.||+|+. .+|+.||||+.+......... .+..|.
T Consensus 13 ~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~------------------------------------~~~~~~ 56 (290)
T 3fme_A 13 MELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQK------------------------------------RLLMDL 56 (290)
T ss_dssp EEEEECSSEEEEEEEETTTTEEEEEEEEC---CHHHHH------------------------------------HHHHHH
T ss_pred HhcCCCCCeEEEEEEecCCCeEEEEEEeecccCcHHHH------------------------------------HHHHHH
Confidence 6799999999999997 589999999986543211100 000111
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceee---e-cCCceEEeeccCCCCCCChHHH---HhcCCCHHHHHHHHH
Q 002031 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVI---Q-SSETVLILEFMDGIRLNDCESL---EAFGVNKQKVVEEIT 275 (977)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~---~-~~~~vLVmE~i~G~~L~~~~~~---~~~~~~~~~l~~~l~ 275 (977)
.. ....+. + ..|++++ . ....+|||||++| ++.+.... ....++...+...+.
T Consensus 57 ~~---~~~~~~--------------h--~~iv~~~~~~~~~~~~~lv~e~~~~-~l~~~l~~~~~~~~~~~~~~~~~i~~ 116 (290)
T 3fme_A 57 DI---SMRTVD--------------C--PFTVTFYGALFREGDVWICMELMDT-SLDKFYKQVIDKGQTIPEDILGKIAV 116 (290)
T ss_dssp HH---HHTTCC--------------C--TTBCCEEEEEECSSSEEEEEECCSE-EHHHHHHHHHHTTCCCCHHHHHHHHH
T ss_pred HH---HHHhCC--------------C--CeEEEEeeeeeccCCEEEEEehhcc-chHHHHHHHHhcCCCCCHHHHHHHHH
Confidence 11 111111 1 1223333 2 4567899999987 55444221 123456666555555
Q ss_pred HHH--HHHHHhc-CccccCCCCCCeEEccCCCCceEEEecccccccCHH
Q 002031 276 RAY--AHQIYVD-GFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSSS 321 (977)
Q Consensus 276 ~~~--l~~i~~~-G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~~ 321 (977)
+++ +..+|.. |++|+|+||.||+++.+ ++++|+|||++..+...
T Consensus 117 qi~~~l~~lH~~~~i~H~dlkp~Nil~~~~--~~~kl~Dfg~~~~~~~~ 163 (290)
T 3fme_A 117 SIVKALEHLHSKLSVIHRDVKPSNVLINAL--GQVKMCDFGISGYLVDD 163 (290)
T ss_dssp HHHHHHHHHHHHSCCCCCCCSGGGCEECTT--CCEEBCCC---------
T ss_pred HHHHHHHHHhhcCCeecCCCCHHHEEECCC--CCEEEeecCCccccccc
Confidence 554 8889998 99999999999999865 89999999998876543
|
| >2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis} | Back alignment and structure |
|---|
Probab=99.26 E-value=4.2e-12 Score=156.05 Aligned_cols=135 Identities=16% Similarity=0.200 Sum_probs=91.9
Q ss_pred cccccccccEEEEEEec--CCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCcHHH
Q 002031 124 TPLATASIAQVHRATLV--DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSE 201 (977)
Q Consensus 124 ~piasaSigqV~~A~l~--~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~E 201 (977)
+.||.|++|.||+|+++ +|+.||||+..+....... . .+.+|
T Consensus 86 ~~lg~G~~g~Vy~a~~~~~~~~~vaiK~~~~~~~~~~~------------------------------~------~~~~E 129 (681)
T 2pzi_A 86 GCIAHGGLGWIYLALDRNVNGRPVVLKGLVHSGDAEAQ------------------------------A------MAMAE 129 (681)
T ss_dssp EEEEEETTEEEEEEEEGGGTTEEEEEEESCSSCCHHHH------------------------------H------HHHHH
T ss_pred EEEeeCCCeEEEEEEEcCCCCcEEEEEEeCccCCHHHH------------------------------H------HHHHH
Confidence 67999999999999985 6899999987643211100 0 12233
Q ss_pred HHHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceee---e-cCC-----ceEEeeccCCCCCCChHHHHhcCCCHHHHHH
Q 002031 202 AENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVI---Q-SSE-----TVLILEFMDGIRLNDCESLEAFGVNKQKVVE 272 (977)
Q Consensus 202 a~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~---~-~~~-----~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~ 272 (977)
++.+.++.+ -.|++++ . ... .+|||||++|.+|.+... ..++...+..
T Consensus 130 ~~~l~~l~h--------------------p~iv~~~~~~~~~~~~~~~~~~lv~E~~~g~~L~~~~~---~~l~~~~~~~ 186 (681)
T 2pzi_A 130 RQFLAEVVH--------------------PSIVQIFNFVEHTDRHGDPVGYIVMEYVGGQSLKRSKG---QKLPVAEAIA 186 (681)
T ss_dssp HGGGGGCCC--------------------TTBCCEEEEEEEECTTSCEEEEEEEECCCCEECC-------CCCCHHHHHH
T ss_pred HHHHHhcCC--------------------CCcCeEeeeEeecCCCCCceeEEEEEeCCCCcHHHHHh---CCCCHHHHHH
Confidence 333322211 1233333 2 222 489999999999987632 2566666666
Q ss_pred HHHHHH--HHHHHhcCccccCCCCCCeEEccCCCCceEEEecccccccCH
Q 002031 273 EITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 320 (977)
Q Consensus 273 ~l~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 320 (977)
.+.+++ +..+|..||+|||+||.|||++. ++++|+|||++..+..
T Consensus 187 ~~~qi~~aL~~lH~~giiHrDlkp~NIll~~---~~~kl~DFG~a~~~~~ 233 (681)
T 2pzi_A 187 YLLEILPALSYLHSIGLVYNDLKPENIMLTE---EQLKLIDLGAVSRINS 233 (681)
T ss_dssp HHHHHHHHHHHHHHTTEECCCCSGGGEEECS---SCEEECCCTTCEETTC
T ss_pred HHHHHHHHHHHHHHCCCeecccChHHeEEeC---CcEEEEecccchhccc
Confidence 666655 88999999999999999999974 4899999999987653
|
| >3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II} | Back alignment and structure |
|---|
Probab=99.26 E-value=4.6e-12 Score=144.51 Aligned_cols=172 Identities=17% Similarity=0.172 Sum_probs=89.4
Q ss_pred cccccccccEEEEEEe-cCCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCcHHHH
Q 002031 124 TPLATASIAQVHRATL-VDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (977)
Q Consensus 124 ~piasaSigqV~~A~l-~~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea 202 (977)
+.||+|++|.||+|+. .+|+.||||+...+.. ....++++++.+- .-++..+++-+...-..+.......
T Consensus 13 ~~lG~G~fg~V~~a~~~~~~~~vAiK~~~~~~~-~~~~E~~il~~l~--------hpnIv~l~~~~~~~~~~~~~~~~~~ 83 (383)
T 3eb0_A 13 KTLGTGSFGIVCEVFDIESGKRFALKKVLQDPR-YKNRELDIMKVLD--------HVNIIKLVDYFYTTGDEEPKPPQPP 83 (383)
T ss_dssp EEEECC-CEEEEEEEETTTCCEEEEEEEECCTT-SCCHHHHHHTTCC--------CTTBCCEEEEEEEC-----------
T ss_pred EEEEeccCEEEEEEEECCCCCEEEEEEEecCcc-hHHHHHHHHHHcC--------CCCccchhheeeecCcccccccccc
Confidence 6899999999999997 5899999998865432 2234444433321 1122222111111000011111111
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeee---cCCceEEeeccCCCCCCChHHH---HhcCCCHHHHHHHHHH
Q 002031 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ---SSETVLILEFMDGIRLNDCESL---EAFGVNKQKVVEEITR 276 (977)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~---~~~~vLVmE~i~G~~L~~~~~~---~~~~~~~~~l~~~l~~ 276 (977)
.....+..... .......+.+.. ....+|||||++| +|.+.... ....++...+...+.+
T Consensus 84 ~~~~~~~~~~~-------------~~~~~~~~~~~~~~~~~~~~lv~e~~~~-~L~~~l~~~~~~~~~l~~~~~~~i~~q 149 (383)
T 3eb0_A 84 DDHNKLGGKNN-------------GVNNHHKSVIVNPSQNKYLNVIMEYVPD-TLHKVLKSFIRSGRSIPMNLISIYIYQ 149 (383)
T ss_dssp ---------------------------------------CCEEEEEECCCSE-EHHHHHHHHHHTTCCCCHHHHHHHHHH
T ss_pred ccccccccccc-------------ccccccccccccCCCceEEEEEEecCCc-cHHHHHHHHHhcCCCCCHHHHHHHHHH
Confidence 11111111000 000011111111 2335699999997 55444221 1233555555554545
Q ss_pred HH--HHHHHhcCccccCCCCCCeEEccCCCCceEEEecccccccC
Q 002031 277 AY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 319 (977)
Q Consensus 277 ~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~ 319 (977)
++ +..+|..|++|||+||+|||++.+ ++.++|+|||++..+.
T Consensus 150 i~~aL~~LH~~gi~H~Dikp~Nil~~~~-~~~~kl~Dfg~a~~~~ 193 (383)
T 3eb0_A 150 LFRAVGFIHSLGICHRDIKPQNLLVNSK-DNTLKLCDFGSAKKLI 193 (383)
T ss_dssp HHHHHHHHHTTTEECSCCCGGGEEEETT-TTEEEECCCTTCEECC
T ss_pred HHHHHHHHHHCcCccCccCHHHEEEcCC-CCcEEEEECCCCcccC
Confidence 44 788999999999999999999743 3899999999998664
|
| >2r3i_A Cell division protein kinase 2; serine/threonine-protein kinase, cell cycle, inhibition, cyclin-dependent kinase, cancer, ATP-binding; HET: SCF; 1.28A {Homo sapiens} PDB: 2r3j_A* 2r3k_A* 2r3l_A* 2r3m_A* 2r3n_A* 2r3o_A* 2r3p_A* 2r3q_A* 1jvp_P* 1buh_A 1ckp_A* 1di8_A* 1dm2_A* 1f5q_A 1fin_A* 1fq1_B* 1fvt_A* 1fvv_A* 1g5s_A* 1gih_A* ... | Back alignment and structure |
|---|
Probab=99.26 E-value=3.2e-12 Score=140.03 Aligned_cols=140 Identities=18% Similarity=0.186 Sum_probs=89.6
Q ss_pred cccccccccEEEEEEec-CCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCcHHHH
Q 002031 124 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (977)
Q Consensus 124 ~piasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea 202 (977)
+.||+|++|.||+|+.+ +|+.||||+.+......- ..-.+.+|+
T Consensus 9 ~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~-----------------------------------~~~~~~~e~ 53 (299)
T 2r3i_A 9 EKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEG-----------------------------------VPSTAIREI 53 (299)
T ss_dssp EEEEECSSSEEEEEEETTTCCEEEEEEC-------------------------------------------CCHHHHHHH
T ss_pred hhhccCCCeeEEEEEEcCCCceEEEEEeecCccchh-----------------------------------hHHHHHHHH
Confidence 67999999999999985 799999998754321100 001233444
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeee-cCCceEEeeccCCCCCCChHHHHh-cCCCHHHHHHHHHHHH--
Q 002031 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLEA-FGVNKQKVVEEITRAY-- 278 (977)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLVmE~i~G~~L~~~~~~~~-~~~~~~~l~~~l~~~~-- 278 (977)
..+.++.+ ..-+.+-.++. ....++||||++| +|.++..... .+.+...+...+.+++
T Consensus 54 ~~l~~l~h-----------------~~i~~~~~~~~~~~~~~lv~e~~~~-~L~~~~~~~~~~~~~~~~~~~~~~~i~~~ 115 (299)
T 2r3i_A 54 SLLKELNH-----------------PNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQG 115 (299)
T ss_dssp HHHTTCCC-----------------TTBCCEEEEEEETTEEEEEEECCSE-EHHHHHHHTTTTCCCHHHHHHHHHHHHHH
T ss_pred HHHHHcCC-----------------CCeeeEEEEEecCCceEEEEEcccC-CHHHHHHhhhccCCCHHHHHHHHHHHHHH
Confidence 44433311 01111222222 4556899999986 6665533221 2355555555555544
Q ss_pred HHHHHhcCccccCCCCCCeEEccCCCCceEEEeccccccc
Q 002031 279 AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKL 318 (977)
Q Consensus 279 l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l 318 (977)
+..+|..|++|+|+||+||+++.+ +.++|+|||++..+
T Consensus 116 l~~lH~~~i~H~dlkp~Nili~~~--~~~kl~dfg~~~~~ 153 (299)
T 2r3i_A 116 LAFCHSHRVLHRDLKPQNLLINTE--GAIKLADFGLARAF 153 (299)
T ss_dssp HHHHHHTTCCCCCCCGGGEEECTT--SCEEECSTTHHHHH
T ss_pred HHHHHHCCccCCCCCHHHeEEcCC--CCEEECcchhhhhc
Confidence 788999999999999999999865 89999999987654
|
| >2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X* | Back alignment and structure |
|---|
Probab=99.26 E-value=2.8e-12 Score=143.88 Aligned_cols=156 Identities=17% Similarity=0.155 Sum_probs=97.3
Q ss_pred cccccccccEEEEEEecCCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCcHHHHH
Q 002031 124 TPLATASIAQVHRATLVDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEAE 203 (977)
Q Consensus 124 ~piasaSigqV~~A~l~~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea~ 203 (977)
+.||+|++|.||+|+. +|+.||||+.+............ ............ -.+.+|++
T Consensus 37 ~~lg~G~~g~V~~~~~-~~~~vavK~~~~~~~~~~~~~~~----------~~~~~~~~~~~~----------~~~~~E~~ 95 (348)
T 2pml_X 37 RTLNQGKFNKIILCEK-DNKFYALKKYEKSLLEKKRDFTK----------SNNDKISIKSKY----------DDFKNELQ 95 (348)
T ss_dssp EEEECCSSCCEEEEEE-TTEEEEEEEEEHHHHSSCEEECC----------CSSSSCCEEEHH----------HHHHHHHH
T ss_pred EEEcCCCCeEEEEEEc-CCceEEEEEeecccccchhhhcc----------ccchhhhHHhHH----------HHHHHHHH
Confidence 6899999999999998 99999999876432110000000 000000000000 13445555
Q ss_pred HHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeee-cCCceEEeeccCCCCCCCh------HHHH-hcCCCHHHHHHHHH
Q 002031 204 NTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDC------ESLE-AFGVNKQKVVEEIT 275 (977)
Q Consensus 204 n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLVmE~i~G~~L~~~------~~~~-~~~~~~~~l~~~l~ 275 (977)
.+.++.+ ..-+.+-.++. ....++||||++|.+|.++ .... ...++...+...+.
T Consensus 96 ~l~~l~h-----------------~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~l~~~~~~~~~~~~~~~i~~ 158 (348)
T 2pml_X 96 IITDIKN-----------------EYCLTCEGIITNYDEVYIIYEYMENDSILKFDEYFFVLDKNYTCFIPIQVIKCIIK 158 (348)
T ss_dssp HHTTCCC-----------------TTBCCCSEEEESSSEEEEEEECCTTCBSSEESSSEESSCSSSCCCCCHHHHHHHHH
T ss_pred HHHhCCC-----------------CCcceEEEEEeeCCeEEEEEeccCCCcHHHHHHHhhhhhhccccCCCHHHHHHHHH
Confidence 5544421 11112222222 4556899999999999886 2211 23455555555555
Q ss_pred HHH--HHHHHh-cCccccCCCCCCeEEccCCCCceEEEecccccccC
Q 002031 276 RAY--AHQIYV-DGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 319 (977)
Q Consensus 276 ~~~--l~~i~~-~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~ 319 (977)
+++ +..+|. .|++|+|+||.||+++.+ ++++|+|||++..+.
T Consensus 159 qi~~~l~~lH~~~~i~H~dl~p~Nil~~~~--~~~kl~dfg~~~~~~ 203 (348)
T 2pml_X 159 SVLNSFSYIHNEKNICHRDVKPSNILMDKN--GRVKLSDFGESEYMV 203 (348)
T ss_dssp HHHHHHHHHHHTSCEECCCCCGGGEEECTT--SCEEECCCTTCEECB
T ss_pred HHHHHHHHHhccCCEeecCCChHhEEEcCC--CcEEEeccccccccc
Confidence 544 788998 999999999999999865 899999999998764
|
| >2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A* | Back alignment and structure |
|---|
Probab=99.26 E-value=9.6e-12 Score=151.91 Aligned_cols=143 Identities=19% Similarity=0.193 Sum_probs=98.6
Q ss_pred cccccccccEEEEEEec----CCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCcH
Q 002031 124 TPLATASIAQVHRATLV----DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFN 199 (977)
Q Consensus 124 ~piasaSigqV~~A~l~----~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~ 199 (977)
+.||.|++|.||+|+.+ .+..||||+.+........ -.|.
T Consensus 396 ~~LG~G~fG~Vy~a~~~~~~~~~~~vaiK~~~~~~~~~~~------------------------------------~~~~ 439 (656)
T 2j0j_A 396 RCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVR------------------------------------EKFL 439 (656)
T ss_dssp EEEECCSSCCEEEEEECCSSSCCEEEEEEECSSTTCHHHH------------------------------------HHHH
T ss_pred eEEeeCCCEEEEEEEEecCCCccEEEEEEEecccCCHHHH------------------------------------HHHH
Confidence 57999999999999974 2567999987643221110 0244
Q ss_pred HHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeeecCCceEEeeccCCCCCCChHHHHhcCCCHHHHHHHHHHHH-
Q 002031 200 SEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQSSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY- 278 (977)
Q Consensus 200 ~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~- 278 (977)
+|+..+.++.+ ..-+.+-.++.....++||||++|.+|.++.......++...+...+.+++
T Consensus 440 ~E~~~l~~l~H-----------------pnIv~l~~~~~~~~~~lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~ 502 (656)
T 2j0j_A 440 QEALTMRQFDH-----------------PHIVKLIGVITENPVWIIMELCTLGELRSFLQVRKFSLDLASLILYAYQLST 502 (656)
T ss_dssp HHHHHHHHCCC-----------------TTBCCEEEEECSSSCEEEEECCTTCBHHHHHHHTTTTCCHHHHHHHHHHHHH
T ss_pred HHHHHHHhCCC-----------------CCCCeEEEEEecCceEEEEEcCCCCcHHHHHHhccCCCCHHHHHHHHHHHHH
Confidence 56655555422 011112122224567899999999999887543333466666555555544
Q ss_pred -HHHHHhcCccccCCCCCCeEEccCCCCceEEEecccccccCHH
Q 002031 279 -AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSSS 321 (977)
Q Consensus 279 -l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~~ 321 (977)
+..+|..|++|||+||.|||++.+ +.++|+|||++..+...
T Consensus 503 aL~~LH~~givHrDikp~NILl~~~--~~vkL~DFG~a~~~~~~ 544 (656)
T 2j0j_A 503 ALAYLESKRFVHRDIAARNVLVSSN--DCVKLGDFGLSRYMEDS 544 (656)
T ss_dssp HHHHHHHTTCCCSCCSGGGEEEEET--TEEEECCCCCCCSCCC-
T ss_pred HHHHHHhCCccccccchHhEEEeCC--CCEEEEecCCCeecCCC
Confidence 888999999999999999999966 89999999999887553
|
| >3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ... | Back alignment and structure |
|---|
Probab=99.25 E-value=9.5e-12 Score=138.25 Aligned_cols=156 Identities=17% Similarity=0.124 Sum_probs=103.4
Q ss_pred CChhhcccccCccccccccccEEEEEEe-cCCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhh
Q 002031 112 ESMGGMFMDFVETPLATASIAQVHRATL-VDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCK 190 (977)
Q Consensus 112 ~~~~~~f~~~d~~piasaSigqV~~A~l-~~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~ 190 (977)
..+.+-|.. .+.||+|++|.||+|+. .+|+.||||+.+....... .
T Consensus 39 ~~~~~~y~~--~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~-------------------------------~ 85 (320)
T 3a99_A 39 EPLESQYQV--GPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDW-------------------------------G 85 (320)
T ss_dssp -CCTTTEEE--EEECSSSSSCEEEEEEETTTTEEEEEEEEEGGGCCCE-------------------------------E
T ss_pred CCccCceEE--EEEEeeCCCeEEEEEEECCCCcEEEEEEEecccchhh-------------------------------h
Confidence 344444433 25799999999999996 5799999998764321100 0
Q ss_pred hcccccCcHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceee---e-cCCceEEeeccCC-CCCCChHHHHhcCC
Q 002031 191 EAPKELDFNSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVI---Q-SSETVLILEFMDG-IRLNDCESLEAFGV 265 (977)
Q Consensus 191 ~l~~Eld~~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~---~-~~~~vLVmE~i~G-~~L~~~~~~~~~~~ 265 (977)
.+..+-.+.+|+..+.++.+. ...|++++ . ....++|||++++ .+|.++... ...+
T Consensus 86 ~~~~~~~~~~E~~~l~~l~~~------------------~~~i~~~~~~~~~~~~~~lv~e~~~~~~~L~~~l~~-~~~l 146 (320)
T 3a99_A 86 ELPNGTRVPMEVVLLKKVSSG------------------FSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITE-RGAL 146 (320)
T ss_dssp ECTTCCEEEHHHHHHHHHCSS------------------SCSBCCEEEEEECSSEEEEEEECCSSEEEHHHHHHH-HCSC
T ss_pred hhhhhhHHHHHHHHHHhhccC------------------CCCceEEEEEEecCCcEEEEEEcCCCCccHHHHHhc-cCCC
Confidence 111223456677776666421 11233333 2 4556899999986 777766432 3345
Q ss_pred CHHHHHHHHHHHH--HHHHHhcCccccCCCCCCeEEccCCCCceEEEecccccccCH
Q 002031 266 NKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 320 (977)
Q Consensus 266 ~~~~l~~~l~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 320 (977)
+...+...+.+++ +..+|..|++|+|+||.|||++.+ ++.++|+|||++..+..
T Consensus 147 ~~~~~~~i~~qi~~~L~~LH~~~ivH~Dlkp~NIll~~~-~~~~kL~Dfg~~~~~~~ 202 (320)
T 3a99_A 147 QEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLN-RGELKLIDFGSGALLKD 202 (320)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEETT-TTEEEECCCTTCEECCS
T ss_pred CHHHHHHHHHHHHHHHHHHHHCCcEeCCCCHHHEEEeCC-CCCEEEeeCcccccccc
Confidence 6555555555544 788999999999999999999833 38999999999887653
|
| >2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A* | Back alignment and structure |
|---|
Probab=99.25 E-value=9.1e-12 Score=135.85 Aligned_cols=144 Identities=17% Similarity=0.192 Sum_probs=96.8
Q ss_pred cccccccccEEEEEEec-CCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCcHHHH
Q 002031 124 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (977)
Q Consensus 124 ~piasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea 202 (977)
+.||+|++|.||+|+.+ +|+.||||+.+...... .+ .-.+.+|+
T Consensus 28 ~~lg~G~~g~V~~~~~~~~~~~valK~~~~~~~~~--~~---------------------------------~~~~~~e~ 72 (287)
T 2wei_A 28 CMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKN--KD---------------------------------TSTILREV 72 (287)
T ss_dssp EEEEEETTEEEEEEEETTTCCEEEEEEEEGGGBSS--SC---------------------------------HHHHHHHH
T ss_pred EEEcCCCCEEEEEEEEcCCCcEEEEEEecccccch--HH---------------------------------HHHHHHHH
Confidence 57999999999999985 79999999976432110 00 00233455
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeee-cCCceEEeeccCCCCCCChHHHHhcCCCHHHHHHHHHHHH--H
Q 002031 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--A 279 (977)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~--l 279 (977)
+.+.++.+ ..-+.+-.++. ....++||||++|.+|.+... ....++...+...+.+++ +
T Consensus 73 ~~l~~l~h-----------------~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~-~~~~~~~~~~~~i~~qi~~~l 134 (287)
T 2wei_A 73 ELLKKLDH-----------------PNIMKLFEILEDSSSFYIVGELYTGGELFDEII-KRKRFSEHDAARIIKQVFSGI 134 (287)
T ss_dssp HHHHTCCC-----------------TTBCCEEEEEECSSEEEEEECCCCSCBHHHHHH-HHSSCCHHHHHHHHHHHHHHH
T ss_pred HHHHhccC-----------------CCccEEEEEEeCCCeEEEEEEccCCCCHHHHHH-hcCCCCHHHHHHHHHHHHHHH
Confidence 54444321 11112222222 455689999999998876543 234566666666555554 7
Q ss_pred HHHHhcCccccCCCCCCeEEccCC-CCceEEEecccccccCH
Q 002031 280 HQIYVDGFFNGDPHPGNFLVSKDP-PHRPILLDFGLTKKLSS 320 (977)
Q Consensus 280 ~~i~~~G~~H~D~hPgNIlv~~~~-~g~i~LiDFG~~~~l~~ 320 (977)
..+|..|++|+|+||.||+++.++ ++.++|+|||++..+..
T Consensus 135 ~~LH~~~i~H~dl~p~NIlv~~~~~~~~~kL~Dfg~~~~~~~ 176 (287)
T 2wei_A 135 TYMHKHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQ 176 (287)
T ss_dssp HHHHHTTCCCSCCCGGGEEESCSSTTCCEEECSTTGGGTBCC
T ss_pred HHHHHCCeeccCCChhhEEEecCCCcccEEEeccCcceeecC
Confidence 889999999999999999997542 35799999999876643
|
| >3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A* | Back alignment and structure |
|---|
Probab=99.25 E-value=6e-12 Score=148.68 Aligned_cols=143 Identities=13% Similarity=0.154 Sum_probs=91.8
Q ss_pred cccccccccEEEEEEec-CCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCcHHHH
Q 002031 124 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (977)
Q Consensus 124 ~piasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea 202 (977)
+.||.|++|.||+|+.+ +|+.||||+.+......- ..-.+.+|+
T Consensus 43 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~-----------------------------------~~~~~~~E~ 87 (494)
T 3lij_A 43 KKLGSGAYGEVLLCRDKVTHVERAIKIIRKTSVSTS-----------------------------------SNSKLLEEV 87 (494)
T ss_dssp EEEECC---EEEEEEETTTCCEEEEEEEEC-----C-----------------------------------TTHHHHHHH
T ss_pred eEEecCCCEEEEEEEECCCCcEEEEEEEeccccCch-----------------------------------HHHHHHHHH
Confidence 57999999999999985 799999999864321000 001233455
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeee-cCCceEEeeccCCCCCCChHHHHhcCCCHHHHHHHHHHHH--H
Q 002031 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--A 279 (977)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~--l 279 (977)
..+..+.+ ..-+.+-.++. ....+|||||++|.+|.+... ....++...+...+.+++ +
T Consensus 88 ~~l~~l~h-----------------pniv~~~~~~~~~~~~~lv~e~~~~g~L~~~~~-~~~~~~~~~~~~i~~qi~~~l 149 (494)
T 3lij_A 88 AVLKLLDH-----------------PNIMKLYDFFEDKRNYYLVMECYKGGELFDEII-HRMKFNEVDAAVIIKQVLSGV 149 (494)
T ss_dssp HHHTTCCC-----------------TTBCCEEEEEECSSEEEEEEECCCSCBHHHHHH-HHSSCCHHHHHHHHHHHHHHH
T ss_pred HHHHhCCC-----------------CCCCeEEEEEEeCCEEEEEEecCCCCcHHHHHH-HcCCCCHHHHHHHHHHHHHHH
Confidence 44433321 11122222333 455689999999998876543 334566655555555544 8
Q ss_pred HHHHhcCccccCCCCCCeEEccCC-CCceEEEecccccccC
Q 002031 280 HQIYVDGFFNGDPHPGNFLVSKDP-PHRPILLDFGLTKKLS 319 (977)
Q Consensus 280 ~~i~~~G~~H~D~hPgNIlv~~~~-~g~i~LiDFG~~~~l~ 319 (977)
..+|..|++|||+||.|||++..+ ++.++|+|||++..+.
T Consensus 150 ~~lH~~~ivH~Dlkp~Nil~~~~~~~~~~kl~DfG~a~~~~ 190 (494)
T 3lij_A 150 TYLHKHNIVHRDLKPENLLLESKEKDALIKIVDFGLSAVFE 190 (494)
T ss_dssp HHHHHTTEECSCCSGGGEEESCSSTTCCEEECCCTTCEECB
T ss_pred HHHHHCCceeccCChhhEEEeCCCCCCcEEEEECCCCeECC
Confidence 889999999999999999997532 3569999999987664
|
| >2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A* | Back alignment and structure |
|---|
Probab=99.25 E-value=5e-12 Score=140.70 Aligned_cols=142 Identities=18% Similarity=0.140 Sum_probs=92.0
Q ss_pred cccccccccEEEEEEe------cCCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccC
Q 002031 124 TPLATASIAQVHRATL------VDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELD 197 (977)
Q Consensus 124 ~piasaSigqV~~A~l------~~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld 197 (977)
+.||.|++|.||+|+. .+|+.||||+.+....... +.+
T Consensus 36 ~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~------------------------------------~~~ 79 (327)
T 2yfx_A 36 RGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQD------------------------------------ELD 79 (327)
T ss_dssp EECC--CSSCEEEEEC--------CCEEEEEECCSSCCHHH------------------------------------HHH
T ss_pred EEEcCCCCeeEEEEEEcCCCCCCccceEEEEEeccccchhh------------------------------------HHH
Confidence 6799999999999984 3678999998764321110 112
Q ss_pred cHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeee-cCCceEEeeccCCCCCCChHHHHh------cCCCHHHH
Q 002031 198 FNSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLEA------FGVNKQKV 270 (977)
Q Consensus 198 ~~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLVmE~i~G~~L~~~~~~~~------~~~~~~~l 270 (977)
+.+|+..+.++.+ ..-+.+-.++. ....+|||||++|.+|.++..... ..++...+
T Consensus 80 ~~~E~~~l~~l~h-----------------~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~ 142 (327)
T 2yfx_A 80 FLMEALIISKFNH-----------------QNIVRCIGVSLQSLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDL 142 (327)
T ss_dssp HHHHHHHHHHCCC-----------------TTBCCEEEEECSSSSCEEEEECCTTEEHHHHHHHTSCCSSSTTSCCHHHH
T ss_pred HHHHHHHHhhCCC-----------------CCCCeEEEEEcCCCCcEEEEecCCCCcHHHHHHhhcccccccccccHHHH
Confidence 4456665555421 01112222222 455689999999999988754321 12555555
Q ss_pred HHHHHHHH--HHHHHhcCccccCCCCCCeEEccCC-CCceEEEeccccccc
Q 002031 271 VEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDP-PHRPILLDFGLTKKL 318 (977)
Q Consensus 271 ~~~l~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~-~g~i~LiDFG~~~~l 318 (977)
...+.+++ +..+|..|++|+|+||.||+++.++ +..++|+|||++..+
T Consensus 143 ~~i~~qi~~al~~LH~~~i~H~dlkp~NIli~~~~~~~~~kl~Dfg~~~~~ 193 (327)
T 2yfx_A 143 LHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDI 193 (327)
T ss_dssp HHHHHHHHHHHHHHHHTTCCCSCCCGGGEEESCSSTTCCEEECCCHHHHHH
T ss_pred HHHHHHHHHHHHHHhhCCeecCcCCHhHEEEecCCCcceEEECcccccccc
Confidence 55555544 7889999999999999999998542 246999999998644
|
| >2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A* | Back alignment and structure |
|---|
Probab=99.25 E-value=2.2e-12 Score=141.31 Aligned_cols=139 Identities=15% Similarity=0.158 Sum_probs=85.0
Q ss_pred cccccccccEEEEEEe-cCCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCcHHHH
Q 002031 124 TPLATASIAQVHRATL-VDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (977)
Q Consensus 124 ~piasaSigqV~~A~l-~~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea 202 (977)
+.||+|++|.||+|+. .+|+.||||+......... . -++.+|+
T Consensus 21 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~------------------------------~------~~~~~e~ 64 (303)
T 2vwi_A 21 EVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTS------------------------------M------DELLKEI 64 (303)
T ss_dssp EECC---CCCEEEEEC----CEEEEECCC---------------------------------------------------
T ss_pred heeccccceEEEEEEECCCCcEEEEEEEEhhhcchh------------------------------H------HHHHHHH
Confidence 6899999999999996 4799999998653211000 0 0122232
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceee---e-cCCceEEeeccCCCCCCChHHHH-------hcCCCHHHHH
Q 002031 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVI---Q-SSETVLILEFMDGIRLNDCESLE-------AFGVNKQKVV 271 (977)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~---~-~~~~vLVmE~i~G~~L~~~~~~~-------~~~~~~~~l~ 271 (977)
..+.++. + ..|++++ . ....++||||++|.+|.++.... ...++...+.
T Consensus 65 ~~l~~l~------------------h--~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~ 124 (303)
T 2vwi_A 65 QAMSQCH------------------H--PNIVSYYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIA 124 (303)
T ss_dssp -CCCCCC------------------C--TTBCCEEEEEESSSCEEEEEECCTTCBHHHHHHHHHHTTTTTTCSSCHHHHH
T ss_pred HHHhhcC------------------C--CCEeeEEEEEeecCCcEEEehhccCCchHHHHHHHhhccccccCCCCHHHHH
Confidence 2221111 1 1233333 2 45678999999999998875421 1225555555
Q ss_pred HHHHHHH--HHHHHhcCccccCCCCCCeEEccCCCCceEEEecccccccCH
Q 002031 272 EEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 320 (977)
Q Consensus 272 ~~l~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 320 (977)
..+.+++ +..+|..|++|+|+||.||+++.+ ++++|+|||++..+..
T Consensus 125 ~i~~qi~~~l~~lH~~~i~H~dl~p~Nil~~~~--~~~kl~dfg~~~~~~~ 173 (303)
T 2vwi_A 125 TILREVLEGLEYLHKNGQIHRDVKAGNILLGED--GSVQIADFGVSAFLAT 173 (303)
T ss_dssp HHHHHHHHHHHHHHHTTCCCCCCSGGGEEECTT--CCEEECCCHHHHHCC-
T ss_pred HHHHHHHHHHHHHHhCCCCCCCCChhhEEEcCC--CCEEEEeccchheecc
Confidence 5555544 788999999999999999999865 8999999999877654
|
| >3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A* | Back alignment and structure |
|---|
Probab=99.24 E-value=1e-11 Score=139.16 Aligned_cols=80 Identities=19% Similarity=0.239 Sum_probs=59.5
Q ss_pred ceEEeeccCCCCCCChHHHHh-cCCCHHHHHHHHHHHH--HHHHHhcCccccCCCCCCeEEccCC-CCceEEEecccccc
Q 002031 242 TVLILEFMDGIRLNDCESLEA-FGVNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDP-PHRPILLDFGLTKK 317 (977)
Q Consensus 242 ~vLVmE~i~G~~L~~~~~~~~-~~~~~~~l~~~l~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~-~g~i~LiDFG~~~~ 317 (977)
.+|||||++|.+|.++..... ..++...+...+.+++ +..+|..|++|+|+||.||+++.++ ++.++|+|||++..
T Consensus 101 ~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~ql~~~l~~LH~~~ivH~dlkp~NIll~~~~~~~~~kl~Dfg~~~~ 180 (336)
T 3fhr_A 101 LLIIMECMEGGELFSRIQERGDQAFTEREAAEIMRDIGTAIQFLHSHNIAHRDVKPENLLYTSKEKDAVLKLTDFGFAKE 180 (336)
T ss_dssp EEEEEECCTTEEHHHHHHTC-CCCCBHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEESCSSTTCCEEECCCTTCEE
T ss_pred EEEEEeccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEEecCCCceEEEecccccee
Confidence 589999999999987643221 1356666666665554 8889999999999999999998532 35699999999987
Q ss_pred cCHH
Q 002031 318 LSSS 321 (977)
Q Consensus 318 l~~~ 321 (977)
....
T Consensus 181 ~~~~ 184 (336)
T 3fhr_A 181 TTQN 184 (336)
T ss_dssp C---
T ss_pred cccc
Confidence 7644
|
| >3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei} | Back alignment and structure |
|---|
Probab=99.24 E-value=1.1e-11 Score=146.96 Aligned_cols=154 Identities=14% Similarity=0.155 Sum_probs=95.5
Q ss_pred ccccccccccEEEEEEec-CCCEEEEEEecCChhhh--hHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCcH
Q 002031 123 ETPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTI--ILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFN 199 (977)
Q Consensus 123 ~~piasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~--~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~ 199 (977)
.+.||.|++|.||+|+.+ +|+.||||+........ ...+-. ...... -.+.
T Consensus 41 ~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~----------------~~~~~~----------~~~~ 94 (504)
T 3q5i_A 41 VRKLGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNK----------------NIEKFH----------EEIY 94 (504)
T ss_dssp EEEEEC--CEEEEEEEETTTCCEEEEEEEEC--------------------------------CTH----------HHHH
T ss_pred EeEecccCCeEEEEEEECCCCcEEEEEEEEhhhcccccccccch----------------hhHHHH----------HHHH
Confidence 368999999999999985 78999999986532110 000000 000000 1234
Q ss_pred HHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeee-cCCceEEeeccCCCCCCChHHHHhcCCCHHHHHHHHHHHH
Q 002031 200 SEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY 278 (977)
Q Consensus 200 ~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~ 278 (977)
+|++.+.++.+ ..-+.+-.++. ....+|||||++|.+|.+... ....++...+...+.+++
T Consensus 95 ~E~~~l~~l~h-----------------pniv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~-~~~~~~~~~~~~i~~qi~ 156 (504)
T 3q5i_A 95 NEISLLKSLDH-----------------PNIIKLFDVFEDKKYFYLVTEFYEGGELFEQII-NRHKFDECDAANIMKQIL 156 (504)
T ss_dssp HHHHHHHTCCC-----------------TTBCCEEEEEECSSEEEEEEECCTTCBHHHHHH-HHSCCCHHHHHHHHHHHH
T ss_pred HHHHHHHhCCC-----------------CCCCeEEEEEEcCCEEEEEEecCCCCcHHHHHH-HcCCCCHHHHHHHHHHHH
Confidence 45555444321 11122222233 455689999999999876643 334566666666665554
Q ss_pred --HHHHHhcCccccCCCCCCeEEccCCC-CceEEEecccccccCH
Q 002031 279 --AHQIYVDGFFNGDPHPGNFLVSKDPP-HRPILLDFGLTKKLSS 320 (977)
Q Consensus 279 --l~~i~~~G~~H~D~hPgNIlv~~~~~-g~i~LiDFG~~~~l~~ 320 (977)
+..+|..|++|||+||.|||++.++. ..++|+|||++..++.
T Consensus 157 ~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~ 201 (504)
T 3q5i_A 157 SGICYLHKHNIVHRDIKPENILLENKNSLLNIKIVDFGLSSFFSK 201 (504)
T ss_dssp HHHHHHHHTTEECSCCSGGGEEESSTTCCSSEEECCCTTCEECCT
T ss_pred HHHHHHHHCCeEeCCCcHHHEEEecCCCCccEEEEECCCCEEcCC
Confidence 88999999999999999999986521 2699999999987654
|
| >3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A* | Back alignment and structure |
|---|
Probab=99.24 E-value=5.9e-12 Score=148.28 Aligned_cols=146 Identities=16% Similarity=0.147 Sum_probs=95.7
Q ss_pred ccccccccccEEEEEEec-CCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCcHHH
Q 002031 123 ETPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSE 201 (977)
Q Consensus 123 ~~piasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~E 201 (977)
.+.||.|++|.||+|+.+ +|+.||||+........- . ..-.+.+|
T Consensus 31 ~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~-~---------------------------------~~~~~~~E 76 (484)
T 3nyv_A 31 QRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQK-T---------------------------------DKESLLRE 76 (484)
T ss_dssp EEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCBS-S---------------------------------CHHHHHHH
T ss_pred eeEEecCCCEEEEEEEECCCCCEEEEEEEEhhhcccc-h---------------------------------HHHHHHHH
Confidence 367999999999999985 899999998753211000 0 00023345
Q ss_pred HHHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeee-cCCceEEeeccCCCCCCChHHHHhcCCCHHHHHHHHHHHH--
Q 002031 202 AENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY-- 278 (977)
Q Consensus 202 a~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~-- 278 (977)
++.+.++.+ ..-+.+-.++. ....++||||++|.+|.+... ....++...+...+.+++
T Consensus 77 ~~~l~~l~h-----------------pniv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~-~~~~~~~~~~~~i~~qi~~~ 138 (484)
T 3nyv_A 77 VQLLKQLDH-----------------PNIMKLYEFFEDKGYFYLVGEVYTGGELFDEII-SRKRFSEVDAARIIRQVLSG 138 (484)
T ss_dssp HHHHTTCCC-----------------TTBCCEEEEEECSSEEEEEECCCCSCBHHHHHH-TCSCCBHHHHHHHHHHHHHH
T ss_pred HHHHHhCCC-----------------CCCCcEEEEEEeCCEEEEEEecCCCCCHHHHHH-hcCCCCHHHHHHHHHHHHHH
Confidence 544433311 11122222222 455689999999998876532 223455555555555544
Q ss_pred HHHHHhcCccccCCCCCCeEEccC-CCCceEEEecccccccCH
Q 002031 279 AHQIYVDGFFNGDPHPGNFLVSKD-PPHRPILLDFGLTKKLSS 320 (977)
Q Consensus 279 l~~i~~~G~~H~D~hPgNIlv~~~-~~g~i~LiDFG~~~~l~~ 320 (977)
+..+|..|++|||+||.|||++.. .++.++|+|||++..+..
T Consensus 139 l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~ 181 (484)
T 3nyv_A 139 ITYMHKNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEA 181 (484)
T ss_dssp HHHHHHTTCCCSCCCGGGEEESSSSTTCCEEECCTTHHHHBCC
T ss_pred HHHHHHCCeeeCCCCHHHEEEecCCCCCcEEEEeeeeeEEccc
Confidence 888999999999999999999532 347899999999876653
|
| >1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ... | Back alignment and structure |
|---|
Probab=99.23 E-value=9.5e-12 Score=143.90 Aligned_cols=137 Identities=21% Similarity=0.189 Sum_probs=87.9
Q ss_pred ccccccccccEEEEEEec-CCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCcHHH
Q 002031 123 ETPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSE 201 (977)
Q Consensus 123 ~~piasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~E 201 (977)
.+.||.|++|.||+|+.+ +|+.||||+...+.. .+.+|
T Consensus 59 ~~~lG~G~fg~Vy~~~~~~~~~~vaiK~~~~~~~-----------------------------------------~~~~E 97 (420)
T 1j1b_A 59 TKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKR-----------------------------------------FKNRE 97 (420)
T ss_dssp EEEEEECSSEEEEEEEETTTCCEEEEEEEECCTT-----------------------------------------SCCHH
T ss_pred eeEEeeCCCEEEEEEEECCCCcEEEEEEecccch-----------------------------------------hHHHH
Confidence 467999999999999985 799999998754311 11134
Q ss_pred HHHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeee---c--CC--ceEEeeccCCCCCCChHH-HH--hcCCCHHHHH
Q 002031 202 AENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ---S--SE--TVLILEFMDGIRLNDCES-LE--AFGVNKQKVV 271 (977)
Q Consensus 202 a~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~---~--~~--~vLVmE~i~G~~L~~~~~-~~--~~~~~~~~l~ 271 (977)
++.+.++.+ ...+.+-.++. . .. .+|||||++|. +.+... .. ...++...+.
T Consensus 98 ~~il~~l~h-----------------pniv~l~~~~~~~~~~~~~~~~~lv~e~~~~~-l~~~~~~~~~~~~~l~~~~~~ 159 (420)
T 1j1b_A 98 LQIMRKLDH-----------------CNIVRLRYFFYSSGEKKDEVYLNLVLDYVPET-VYRVARHYSRAKQTLPVIYVK 159 (420)
T ss_dssp HHHHHTCCC-----------------TTBCCEEEEEEEEETTTTEEEEEEEEECCCEE-HHHHHHHHHHTTCCCCHHHHH
T ss_pred HHHHHHcCC-----------------CCccceeeEEeccCCCCcceeEEeehhccccc-HHHHHHHHhhccCCCCHHHHH
Confidence 444433321 11122222221 1 11 36899999873 322211 11 2234555554
Q ss_pred HHHHHHH--HHHHHhcCccccCCCCCCeEEccCCCCceEEEecccccccC
Q 002031 272 EEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 319 (977)
Q Consensus 272 ~~l~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~ 319 (977)
..+.+++ +..+|..|++||||||.||||+.+ .+.++|+|||+++.+.
T Consensus 160 ~~~~qi~~aL~~LH~~~ivHrDlkp~NILl~~~-~~~~kl~DFG~a~~~~ 208 (420)
T 1j1b_A 160 LYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPD-TAVLKLCDFGSAKQLV 208 (420)
T ss_dssp HHHHHHHHHHHHHHTTTEECSCCSGGGEEEETT-TTEEEECCCTTCEECC
T ss_pred HHHHHHHHHHHHHHHCCccccCCChhhEEEeCC-CCeEEeccchhhhhcc
Confidence 4444444 788999999999999999999854 3578999999998764
|
| >3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.23 E-value=1.5e-11 Score=136.81 Aligned_cols=142 Identities=20% Similarity=0.163 Sum_probs=93.8
Q ss_pred ccccccccccEEEEEEec-CCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCcHHH
Q 002031 123 ETPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSE 201 (977)
Q Consensus 123 ~~piasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~E 201 (977)
.+.||.|++|.||+|+.. +|+.||||+....-..... .+.+|
T Consensus 33 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~-------------------------------------~~~~e 75 (337)
T 3ll6_A 33 RRVLAEGGFAFVYEAQDVGSGREYALKRLLSNEEEKNR-------------------------------------AIIQE 75 (337)
T ss_dssp EEEEECCSSEEEEEEEETTTCCEEEEEEEEESSHHHHH-------------------------------------HHHHH
T ss_pred EEEEccCCceEEEEEEECCCCcEEEEEEecCCchHHHH-------------------------------------HHHHH
Confidence 368999999999999974 8999999987543211100 13345
Q ss_pred HHHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeee---------cCCceEEeeccCCCCCCChHHH-H-hcCCCHHHH
Q 002031 202 AENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ---------SSETVLILEFMDGIRLNDCESL-E-AFGVNKQKV 270 (977)
Q Consensus 202 a~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~---------~~~~vLVmE~i~G~~L~~~~~~-~-~~~~~~~~l 270 (977)
...+.++... ..-+.+-.++. ....++||||++| +|.+.... . ...++...+
T Consensus 76 ~~~l~~l~~h----------------~~iv~~~~~~~~~~~~~~~~~~~~~lv~e~~~g-~L~~~l~~~~~~~~~~~~~~ 138 (337)
T 3ll6_A 76 VCFMKKLSGH----------------PNIVQFCSAASIGKEESDTGQAEFLLLTELCKG-QLVEFLKKMESRGPLSCDTV 138 (337)
T ss_dssp HHHHHHHTTS----------------TTBCCEEEEEEECTTTSTTSSEEEEEEEECCSE-EHHHHHHHHHTTCSCCHHHH
T ss_pred HHHHHHhccC----------------CChhhccccccccccccccCCceEEEEEEecCC-CHHHHHHHhhccCCCCHHHH
Confidence 5555555310 00111111110 1224899999986 55554321 1 123566666
Q ss_pred HHHHHHHH--HHHHHhcC--ccccCCCCCCeEEccCCCCceEEEecccccccCH
Q 002031 271 VEEITRAY--AHQIYVDG--FFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 320 (977)
Q Consensus 271 ~~~l~~~~--l~~i~~~G--~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 320 (977)
...+.+++ +..+|..| ++|+|+||.|||++.+ ++++|+|||++..++.
T Consensus 139 ~~i~~qi~~~l~~LH~~~~~ivH~Dikp~NIl~~~~--~~~kl~Dfg~~~~~~~ 190 (337)
T 3ll6_A 139 LKIFYQTCRAVQHMHRQKPPIIHRDLKVENLLLSNQ--GTIKLCDFGSATTISH 190 (337)
T ss_dssp HHHHHHHHHHHHHHHTSSSCCBCCCCCGGGCEECTT--SCEEBCCCTTCBCCSS
T ss_pred HHHHHHHHHHHHHHHhCCCCEEEccCCcccEEECCC--CCEEEecCccceeccc
Confidence 66665554 88899999 9999999999999865 8999999999988754
|
| >1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} PDB: 3fpq_A | Back alignment and structure |
|---|
Probab=99.22 E-value=1.6e-11 Score=134.08 Aligned_cols=142 Identities=13% Similarity=0.037 Sum_probs=92.6
Q ss_pred cccccccccEEEEEEe-cCCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCcHHHH
Q 002031 124 TPLATASIAQVHRATL-VDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (977)
Q Consensus 124 ~piasaSigqV~~A~l-~~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea 202 (977)
+.||+|++|.||+|+. .+++.||||+........ .+.+ .+.+|+
T Consensus 32 ~~lg~G~~g~Vy~~~~~~~~~~va~k~~~~~~~~~--~~~~---------------------------------~~~~e~ 76 (290)
T 1t4h_A 32 IEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTK--SERQ---------------------------------RFKEEA 76 (290)
T ss_dssp EEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCH--HHHH---------------------------------HHHHHH
T ss_pred eeccCCCCeEEEEeEecCCceEEEEEEecchhhCH--HHHH---------------------------------HHHHHH
Confidence 4699999999999997 478999999876422110 0000 123344
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeee-----cCCceEEeeccCCCCCCChHHHHhcCCCHHHHHHHHHHH
Q 002031 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-----SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRA 277 (977)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-----~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~ 277 (977)
..+.++.+ ..-+.+-.++. ....++||||++|.+|.++... ...++...+...+.++
T Consensus 77 ~~l~~l~h-----------------~~iv~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~-~~~~~~~~~~~~~~qi 138 (290)
T 1t4h_A 77 EMLKGLQH-----------------PNIVRFYDSWESTVKGKKCIVLVTELMTSGTLKTYLKR-FKVMKIKVLRSWCRQI 138 (290)
T ss_dssp HHHTTCCC-----------------TTBCCEEEEEEEESSSCEEEEEEEECCCSCBHHHHHHH-HSSCCHHHHHHHHHHH
T ss_pred HHHHhCCC-----------------CCeeeeeeeeccccCCCceEEEEEEecCCCCHHHHHHH-ccCCCHHHHHHHHHHH
Confidence 44333311 01111112221 1225899999999999887532 2445666655555554
Q ss_pred H--HHHHHhcC--ccccCCCCCCeEEccCCCCceEEEecccccccC
Q 002031 278 Y--AHQIYVDG--FFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 319 (977)
Q Consensus 278 ~--l~~i~~~G--~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~ 319 (977)
+ +..+|..| ++|+|+||.||+++.+ ++.++|+|||++....
T Consensus 139 ~~~l~~lH~~~~~i~H~dikp~Nil~~~~-~~~~kl~Dfg~~~~~~ 183 (290)
T 1t4h_A 139 LKGLQFLHTRTPPIIHRDLKCDNIFITGP-TGSVKIGDLGLATLKR 183 (290)
T ss_dssp HHHHHHHHTSSSCCCCSCCCGGGEEESST-TSCEEECCTTGGGGCC
T ss_pred HHHHHHHHcCCCCEEECCCCHHHEEEECC-CCCEEEeeCCCccccc
Confidence 4 78899999 9999999999999732 3799999999986543
|
| >1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A* | Back alignment and structure |
|---|
Probab=99.22 E-value=1e-11 Score=138.15 Aligned_cols=139 Identities=18% Similarity=0.190 Sum_probs=92.9
Q ss_pred ccccccccccEEEEEEec-CCCEE--EEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCcH
Q 002031 123 ETPLATASIAQVHRATLV-DGRQV--VVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFN 199 (977)
Q Consensus 123 ~~piasaSigqV~~A~l~-~G~~V--AVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~ 199 (977)
.+.||.|++|.||+|+.+ +|+.| |||+.+....... .-.+.
T Consensus 30 ~~~lg~G~~g~Vy~~~~~~~~~~~~v~iK~~~~~~~~~~------------------------------------~~~~~ 73 (327)
T 1fvr_A 30 QDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDD------------------------------------HRDFA 73 (327)
T ss_dssp EEEEECGGGCEEEEEEEEETTEEEEEEEEEEECC------------------------------------------CHHH
T ss_pred eeeeecCCCceEEEEEEccCCcccceeeeeeccccchHH------------------------------------HHHHH
Confidence 368999999999999974 67755 8887754221110 01234
Q ss_pred HHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceee---e-cCCceEEeeccCCCCCCChHHHHh-------------
Q 002031 200 SEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVI---Q-SSETVLILEFMDGIRLNDCESLEA------------- 262 (977)
Q Consensus 200 ~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~---~-~~~~vLVmE~i~G~~L~~~~~~~~------------- 262 (977)
+|.+.+.++. .++ .|++++ . ....+|||||++|.+|.++.....
T Consensus 74 ~E~~~l~~l~-----------------~hp--~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~ 134 (327)
T 1fvr_A 74 GELEVLCKLG-----------------HHP--NIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANS 134 (327)
T ss_dssp HHHHHHTTCC-----------------CCT--TBCCEEEEEEETTEEEEEECCCTTCBHHHHHHTTCHHHHCHHHHHHTT
T ss_pred HHHHHHHhcc-----------------CCC--chhhhceeeeeCCceEEEEecCCCCCHHHHHHhccccccccccccccc
Confidence 4554443331 011 233333 2 455689999999999987643111
Q ss_pred --cCCCHHHHHHHHHHHH--HHHHHhcCccccCCCCCCeEEccCCCCceEEEeccccccc
Q 002031 263 --FGVNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKL 318 (977)
Q Consensus 263 --~~~~~~~l~~~l~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l 318 (977)
..++...+...+.+++ +..+|..|++|+|+||.||+++.+ +.++|+|||++...
T Consensus 135 ~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~NIl~~~~--~~~kL~Dfg~~~~~ 192 (327)
T 1fvr_A 135 TASTLSSQQLLHFAADVARGMDYLSQKQFIHRDLAARNILVGEN--YVAKIADFGLSRGQ 192 (327)
T ss_dssp BSCSSCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECGG--GCEEECCTTCEESS
T ss_pred ccccCCHHHHHHHHHHHHHHHHHHHhCCccCCCCccceEEEcCC--CeEEEcccCcCccc
Confidence 1355666666665554 888999999999999999999865 89999999998743
|
| >2cc1_A Beta-lactamase, penicillinase; hydrolase, antibiotic resistance, broad-spectrum; 2.13A {Mycobacterium fortuitum} SCOP: e.3.1.1 | Back alignment and structure |
|---|
Probab=99.21 E-value=9.5e-11 Score=126.21 Aligned_cols=100 Identities=12% Similarity=0.204 Sum_probs=69.2
Q ss_pred CCCCcceeecchHHHHHHHHHHHHHCCCcCcCCchhhhccccccCCCCCCcHHHHhcCcCCCCCCcCCCCCCCCcCCCCH
Q 002031 526 QPDSLFPVFSVTKGITAGMLHWLVDNGKLKLEENIANIWPEFKSNGKDLIKVHHVLNHTSGLHNVSVDLSSENPLLICDW 605 (977)
Q Consensus 526 t~~T~f~i~SiTK~~ta~~v~~lv~~G~l~ld~~v~~ylP~~~~~~~~~iTir~LLsHtSGl~~~~~~~~~~~~~~~~~~ 605 (977)
++++.|++||++|.||++++++++++|+|+||++|. +|.++++.| +|+.... +....+.
T Consensus 34 ~~~~~~~~aS~~K~~ta~~~l~~~~~G~l~ld~~v~-------------~~~~~~~~~-~~~~~~~-------~~~~~t~ 92 (262)
T 2cc1_A 34 RPDEMFAMCSTFKGYVAARVLQMAEHGEISLDNRVF-------------VDADALVPN-SPVTEAR-------AGAEMTL 92 (262)
T ss_dssp STTSCEECGGGHHHHHHHHHHHHHHTTSSCTTCEEE-------------CCGGGCCSS-CHHHHTT-------TTSEEEH
T ss_pred cCCCeeeehHHHHHHHHHHHHHHHHcCCCCCCceEE-------------cCHHHccCC-CcccccC-------CCCCcCH
Confidence 568999999999999999999999999999999986 455566665 3332211 1123466
Q ss_pred HHHHHHHHccCCCCCCCCceecc-cCcHHHHHHHHHHHHhCCC-HHHHHHHHcccccCCCCccC
Q 002031 606 DECLNRIALSAPETEPGQEQLYH-YLSFGWLCGGIIERASGKK-FQEILEEGIIQPLSIDGELY 667 (977)
Q Consensus 606 ~~~~~~l~~~~~~~~pG~~~~Ys-n~~~~~llg~iiE~vtG~~-~~~~l~~~if~PLGm~~t~~ 667 (977)
++++..+.. || |.+ ...++|+++|.. +.++ ++||||++|.+
T Consensus 93 ~~ll~~~~~------------~S~N~a----~~~l~~~vgG~~~~~~~-----~~~lG~~~t~~ 135 (262)
T 2cc1_A 93 AELCQAALQ------------RSDNTA----ANLLLKTIGGPAAVTAF-----ARSVGDERTRL 135 (262)
T ss_dssp HHHHHHHHH------------SCCHHH----HHHHHHHHTHHHHHHHH-----HHHTTCCSCCC
T ss_pred HHHHHHHHH------------hCCHHH----HHHHHHHhCChHHHHHH-----HHHcCCCceee
Confidence 777665432 23 333 356788888753 4444 56899999854
|
| >3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A* | Back alignment and structure |
|---|
Probab=99.21 E-value=2.8e-11 Score=133.71 Aligned_cols=140 Identities=16% Similarity=0.204 Sum_probs=93.9
Q ss_pred cccccccccEEEEEEecCCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCcHHHHH
Q 002031 124 TPLATASIAQVHRATLVDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEAE 203 (977)
Q Consensus 124 ~piasaSigqV~~A~l~~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea~ 203 (977)
+.||+|++|.||+|+..+|+.||||+.+......- .. -.+.+|++
T Consensus 34 ~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~--~~---------------------------------~~~~~E~~ 78 (313)
T 3cek_A 34 KQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQ--TL---------------------------------DSYRNEIA 78 (313)
T ss_dssp EEEECCSSEEEEEEECTTCCEEEEEEEECSSCCHH--HH---------------------------------HHHHHHHH
T ss_pred EEecCCCCEEEEEEEcCCCcEEEEEEecccccccc--ch---------------------------------HHHHHHHH
Confidence 68999999999999998899999999865321110 00 02445666
Q ss_pred HHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceee---e-cCCceEEeeccCCCCCCChHHHHhcCCCHHHHHHHHHHHH-
Q 002031 204 NTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVI---Q-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY- 278 (977)
Q Consensus 204 n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~---~-~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~- 278 (977)
.+.++.+.. ..|.+++ . ....+|||| +.|.+|.++.. ....++...+...+.+++
T Consensus 79 ~l~~l~~~~------------------~~iv~~~~~~~~~~~~~lv~e-~~~~~L~~~l~-~~~~~~~~~~~~i~~qi~~ 138 (313)
T 3cek_A 79 YLNKLQQHS------------------DKIIRLYDYEITDQYIYMVME-CGNIDLNSWLK-KKKSIDPWERKSYWKNMLE 138 (313)
T ss_dssp HHHHHGGGC------------------TTBCCEEEEEECSSEEEEEEC-CCSEEHHHHHH-HCSSCCHHHHHHHHHHHHH
T ss_pred HHHhccccC------------------CceEEEEEEeecCCEEEEEEe-cCCCcHHHHHH-hcCCCCHHHHHHHHHHHHH
Confidence 666665311 1122333 2 345689999 55777776643 223455555555444444
Q ss_pred -HHHHHhcCccccCCCCCCeEEccCCCCceEEEecccccccCHH
Q 002031 279 -AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSSS 321 (977)
Q Consensus 279 -l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~~ 321 (977)
+..+|..|++|+|+||.||+++ + +.++|+|||++..+...
T Consensus 139 aL~~LH~~~ivH~dlkp~NIl~~-~--~~~kL~Dfg~~~~~~~~ 179 (313)
T 3cek_A 139 AVHTIHQHGIVHSDLKPANFLIV-D--GMLKLIDFGIANQMQPD 179 (313)
T ss_dssp HHHHHHHTTCCCCCCCGGGEEEE-T--TEEEECCCSSSCC----
T ss_pred HHHHHHHCCceecCCCcccEEEE-C--CeEEEeeccccccccCc
Confidence 7889999999999999999996 2 78999999999887553
|
| >3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major} | Back alignment and structure |
|---|
Probab=99.20 E-value=2.6e-11 Score=136.60 Aligned_cols=78 Identities=19% Similarity=0.207 Sum_probs=53.8
Q ss_pred ceEEeeccCCCCCCChHHH--HhcCCCHHHHHHHHHHHH--HHHHH--hcCccccCCCCCCeEEccCCCCceEEEecccc
Q 002031 242 TVLILEFMDGIRLNDCESL--EAFGVNKQKVVEEITRAY--AHQIY--VDGFFNGDPHPGNFLVSKDPPHRPILLDFGLT 315 (977)
Q Consensus 242 ~vLVmE~i~G~~L~~~~~~--~~~~~~~~~l~~~l~~~~--l~~i~--~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~ 315 (977)
.++||||++|..+..+... .........+...+.+++ +..+| ..|++|+|+||.|||++.. ++.++|+|||++
T Consensus 101 ~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~~~ivH~Dlkp~NIll~~~-~~~~kl~Dfg~a 179 (360)
T 3e3p_A 101 LNVVMEYVPDTLHRCCRNYYRRQVAPPPILIKVFLFQLIRSIGCLHLPSVNVCHRDIKPHNVLVNEA-DGTLKLCDFGSA 179 (360)
T ss_dssp EEEEEECCSCBHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHTSTTTCCBCSCCCGGGEEEETT-TTEEEECCCTTC
T ss_pred EEEEeecccccHHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHhCCCCCeecCcCCHHHEEEeCC-CCcEEEeeCCCc
Confidence 4789999998433222111 112334444444444433 67788 9999999999999999852 489999999999
Q ss_pred cccCH
Q 002031 316 KKLSS 320 (977)
Q Consensus 316 ~~l~~ 320 (977)
..+..
T Consensus 180 ~~~~~ 184 (360)
T 3e3p_A 180 KKLSP 184 (360)
T ss_dssp BCCCT
T ss_pred eecCC
Confidence 87654
|
| >3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A* | Back alignment and structure |
|---|
Probab=99.20 E-value=3.4e-11 Score=133.94 Aligned_cols=143 Identities=13% Similarity=0.154 Sum_probs=88.3
Q ss_pred cccccccccEEEEEEec-CCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCcHHHH
Q 002031 124 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (977)
Q Consensus 124 ~piasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea 202 (977)
+.||+|++|.||+|+.+ +|+.||||+.+......... .+..|.
T Consensus 28 ~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~------------------------------------~~~~e~ 71 (327)
T 3aln_A 28 GEIGRGAYGSVNKMVHKPSGQIMAVKRIRSTVDEKEQK------------------------------------QLLMDL 71 (327)
T ss_dssp CEEEECSSEEEEEEEETTTTEEEEEEEEECCCCHHHHH------------------------------------HHHHHH
T ss_pred heeccCCCEEEEEEEEcCCCCEEEEEEeecccCchHHH------------------------------------HHHHHH
Confidence 67999999999999984 79999999987643211100 011111
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeee-cCCceEEeeccCCCCCCChHHHH----hcCCCHHHHHHHHHHH
Q 002031 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLE----AFGVNKQKVVEEITRA 277 (977)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLVmE~i~G~~L~~~~~~~----~~~~~~~~l~~~l~~~ 277 (977)
.. +...+. ...-+.+-.++. ....+|||||++| +|.++.... ...++...+...+.++
T Consensus 72 ~~---~~~~~~-------------h~niv~~~~~~~~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~i~~~i 134 (327)
T 3aln_A 72 DV---VMRSSD-------------CPYIVQFYGALFREGDCWICMELMST-SFDKFYKYVYSVLDDVIPEEILGKITLAT 134 (327)
T ss_dssp HH---HHSSCC-------------CTTBCCEEEEEECSSEEEEEECCCSE-EHHHHHHHHHHTTCCCCCHHHHHHHHHHH
T ss_pred HH---HHHcCC-------------CCcEeeeeeEEEeCCceEEEEeecCC-ChHHHHHHHHhhhcccCcHHHHHHHHHHH
Confidence 11 111111 011112222222 4556899999997 554443211 2334555555544444
Q ss_pred H--HHHHHhc-CccccCCCCCCeEEccCCCCceEEEecccccccCHH
Q 002031 278 Y--AHQIYVD-GFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSSS 321 (977)
Q Consensus 278 ~--l~~i~~~-G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~~ 321 (977)
+ +..+|.. |++|+|+||.||+++.+ +.++|+|||++..+...
T Consensus 135 ~~~l~~lH~~~~ivH~dlkp~NIll~~~--~~~kl~Dfg~~~~~~~~ 179 (327)
T 3aln_A 135 VKALNHLKENLKIIHRDIKPSNILLDRS--GNIKLCDFGISGQLVDS 179 (327)
T ss_dssp HHHHHHHHHHHSCCCSCCCGGGEEEETT--TEEEECCCSSSCC----
T ss_pred HHHHHHHhccCCEeECCCCHHHEEEcCC--CCEEEccCCCceecccc
Confidence 4 7788998 99999999999999865 89999999999877543
|
| >2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A* | Back alignment and structure |
|---|
Probab=99.19 E-value=1.2e-11 Score=143.54 Aligned_cols=136 Identities=24% Similarity=0.194 Sum_probs=88.0
Q ss_pred ccccccccccEEEEEEecCCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCcHHHH
Q 002031 123 ETPLATASIAQVHRATLVDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (977)
Q Consensus 123 ~~piasaSigqV~~A~l~~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea 202 (977)
.+.||.|++|.||.+...+|+.||||+...+..+. +.+|.
T Consensus 20 ~~~LG~G~~g~V~~~~~~~g~~vAvK~~~~~~~~~----------------------------------------~~~E~ 59 (434)
T 2rio_A 20 EKILGYGSSGTVVFQGSFQGRPVAVKRMLIDFCDI----------------------------------------ALMEI 59 (434)
T ss_dssp EEEEEECSTTCEEEEEESSSSEEEEEEEEGGGHHH----------------------------------------HHHHH
T ss_pred cCeEeeCCCeEEEEEEEECCeEEEEEEEcHHHHHH----------------------------------------HHHHH
Confidence 47899999999987766789999999876432211 12344
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeee----cCCceEEeeccCCCCCCChHHHHhcCCC-----------H
Q 002031 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ----SSETVLILEFMDGIRLNDCESLEAFGVN-----------K 267 (977)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~----~~~~vLVmE~i~G~~L~~~~~~~~~~~~-----------~ 267 (977)
+.+.++.+ ++ .|.+++. ....+|||||++| +|.++.. ..+.. .
T Consensus 60 ~~l~~l~~-----------------Hp--nIv~~~~~~~~~~~~~lv~E~~~g-sL~~~l~--~~~~~~~~~~~~~~~~~ 117 (434)
T 2rio_A 60 KLLTESDD-----------------HP--NVIRYYCSETTDRFLYIALELCNL-NLQDLVE--SKNVSDENLKLQKEYNP 117 (434)
T ss_dssp HHHHHHTT-----------------ST--TBCCEEEEEECSSEEEEEECCCSE-EHHHHHH--TC------------CCH
T ss_pred HHHHhccC-----------------CC--CcCeEEEEEecCCeEEEEEecCCC-CHHHHHh--ccCCCchhhhhccchhH
Confidence 44433311 11 1233332 3445899999976 7776643 21111 1
Q ss_pred HHHHHHHHHHHHHHHHhcCccccCCCCCCeEEccC-----------CCCceEEEecccccccCHH
Q 002031 268 QKVVEEITRAYAHQIYVDGFFNGDPHPGNFLVSKD-----------PPHRPILLDFGLTKKLSSS 321 (977)
Q Consensus 268 ~~l~~~l~~~~l~~i~~~G~~H~D~hPgNIlv~~~-----------~~g~i~LiDFG~~~~l~~~ 321 (977)
..++..++.. +..+|..|++|||+||.|||++.+ .++.++|+|||++..+...
T Consensus 118 ~~i~~qi~~a-L~~LH~~~ivHrDLkp~NILl~~~~~~~~~~~~~~~~~~~kL~DFG~a~~~~~~ 181 (434)
T 2rio_A 118 ISLLRQIASG-VAHLHSLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSG 181 (434)
T ss_dssp HHHHHHHHHH-HHHHHHTTEECCCCSGGGEEEECCHHHHSCCTTCCCSCEEEECCCTTCEECCC-
T ss_pred HHHHHHHHHH-HHHHHHCCccccCCChHhEEEecCcccccccccCCCceEEEEcccccceecCCC
Confidence 1233333333 778999999999999999999753 2358999999999987653
|
| >2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.19 E-value=3.7e-11 Score=132.62 Aligned_cols=139 Identities=14% Similarity=0.178 Sum_probs=80.2
Q ss_pred cccccccccEEEEEEec-CCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCcHHHH
Q 002031 124 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (977)
Q Consensus 124 ~piasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea 202 (977)
+.||.|++|.||+|+.+ +|+.||||+.+......-. .+ +..|.
T Consensus 31 ~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~--~~----------------------------------~~~~~ 74 (318)
T 2dyl_A 31 GEMGSGTCGQVWKMRFRKTGHVIAVKQMRRSGNKEEN--KR----------------------------------ILMDL 74 (318)
T ss_dssp EEC------CEEEEEETTTCCEEEEEEEETTSCHHHH--HH----------------------------------HHHHH
T ss_pred ceeeecCCeeEEEEEEecCCeEEEEEEecccccchHH--HH----------------------------------HHHHH
Confidence 68999999999999985 7999999998754221100 00 00111
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceee---e-cCCceEEeeccCCCCCCChHHHHhcCCCHHHHHHHHHHHH
Q 002031 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVI---Q-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY 278 (977)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~---~-~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~ 278 (977)
.. +..... + ..|.+++ . ....+|||||+ |..+..+.......++...+...+.+++
T Consensus 75 ~~---~~~~~~--------------h--~~i~~~~~~~~~~~~~~lv~e~~-~~~~~~l~~~~~~~~~~~~~~~~~~~i~ 134 (318)
T 2dyl_A 75 DV---VLKSHD--------------C--PYIVQCFGTFITNTDVFIAMELM-GTCAEKLKKRMQGPIPERILGKMTVAIV 134 (318)
T ss_dssp HH---HHHTTT--------------C--TTBCCEEEEEECSSEEEEEECCC-SEEHHHHHHHHTSCCCHHHHHHHHHHHH
T ss_pred HH---HHHhcC--------------C--CceeeEEEEEecCCcEEEEEecc-CCcHHHHHHHhccCCCHHHHHHHHHHHH
Confidence 11 111111 1 1233333 2 45568999999 4444443322234456666555555544
Q ss_pred --HHHHHh-cCccccCCCCCCeEEccCCCCceEEEecccccccCH
Q 002031 279 --AHQIYV-DGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 320 (977)
Q Consensus 279 --l~~i~~-~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 320 (977)
+..+|. +|++|+|+||.||+++.+ ++++|+|||++..+..
T Consensus 135 ~~l~~lH~~~~i~H~dlkp~Nil~~~~--~~~kl~dfg~~~~~~~ 177 (318)
T 2dyl_A 135 KALYYLKEKHGVIHRDVKPSNILLDER--GQIKLCDFGISGRLVD 177 (318)
T ss_dssp HHHHHHHHHHCCCCCCCCGGGEEECTT--SCEEECCCTTC-----
T ss_pred HHHHHHHhhCCEEeCCCCHHHEEECCC--CCEEEEECCCchhccC
Confidence 778898 499999999999999865 8999999999877654
|
| >4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis} | Back alignment and structure |
|---|
Probab=99.19 E-value=1.9e-11 Score=140.13 Aligned_cols=138 Identities=21% Similarity=0.192 Sum_probs=87.7
Q ss_pred ccccccccccEEEEEEecCCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCcHHHH
Q 002031 123 ETPLATASIAQVHRATLVDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (977)
Q Consensus 123 ~~piasaSigqV~~A~l~~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea 202 (977)
.+.||.|++|.||+|+..++..||||....... ...+|.
T Consensus 45 ~~~lG~G~~g~V~~a~~~~~~~~aikk~~~~~~-----------------------------------------~~~~E~ 83 (394)
T 4e7w_A 45 CKVIGNGSFGVVFQAKLVESDEVAIKKVLQDKR-----------------------------------------FKNREL 83 (394)
T ss_dssp EEEEEEETTEEEEEEEETTTEEEEEEEEECCTT-----------------------------------------SCCHHH
T ss_pred eEEEeeCCCeEEEEEEECCCCeEEEEEEecCcc-----------------------------------------hHHHHH
Confidence 368999999999999997777799987643211 011344
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeee-cCC------ceEEeeccCCCCCCChHHHH--hcCCCHHHHHHH
Q 002031 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSE------TVLILEFMDGIRLNDCESLE--AFGVNKQKVVEE 273 (977)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~------~vLVmE~i~G~~L~~~~~~~--~~~~~~~~l~~~ 273 (977)
+.+..+.+ ..-+.+-.++. ... .+|||||++|..+....... ...++...+...
T Consensus 84 ~il~~l~h-----------------~niv~l~~~~~~~~~~~~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 146 (394)
T 4e7w_A 84 QIMRIVKH-----------------PNVVDLKAFFYSNGDKKDEVFLNLVLEYVPETVYRASRHYAKLKQTMPMLLIKLY 146 (394)
T ss_dssp HHHHTCCC-----------------TTBCCEEEEEEEESSSSSCEEEEEEEECCSEEHHHHHHHHHHTTSCCCHHHHHHH
T ss_pred HHHHhCCC-----------------CCcceEEEEEEecCCCCCceEEEEEeeccCccHHHHHHHHHhhcCCCCHHHHHHH
Confidence 44433321 11122222222 111 46999999985443322211 223445544444
Q ss_pred HHHHH--HHHHHhcCccccCCCCCCeEEccCCCCceEEEecccccccC
Q 002031 274 ITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 319 (977)
Q Consensus 274 l~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~ 319 (977)
+.+++ +..+|..|++|||+||.|||++.+ ++.++|+|||+++.+.
T Consensus 147 ~~qi~~aL~~LH~~~ivHrDlkp~Nill~~~-~~~~kL~DFG~a~~~~ 193 (394)
T 4e7w_A 147 MYQLLRSLAYIHSIGICHRDIKPQNLLLDPP-SGVLKLIDFGSAKILI 193 (394)
T ss_dssp HHHHHHHHHHHHHTTEECSCCSGGGEEEETT-TTEEEECCCTTCEECC
T ss_pred HHHHHHHHHHHHHCCccCCCCCHHHEEEcCC-CCcEEEeeCCCccccc
Confidence 44444 788999999999999999999832 3899999999998763
|
| >3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.19 E-value=1.2e-11 Score=143.53 Aligned_cols=137 Identities=18% Similarity=0.218 Sum_probs=85.8
Q ss_pred ccccccccccEEEEEEecCCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCcHHHH
Q 002031 123 ETPLATASIAQVHRATLVDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (977)
Q Consensus 123 ~~piasaSigqV~~A~l~~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea 202 (977)
.+.||.|++|+|+.....+|+.||||+..+..... +.+|.
T Consensus 29 ~~~LG~G~~G~V~~~~~~~~~~vAvK~~~~~~~~~----------------------------------------~~~E~ 68 (432)
T 3p23_A 29 KDVLGHGAEGTIVYRGMFDNRDVAVKRILPECFSF----------------------------------------ADREV 68 (432)
T ss_dssp EEEEEECGGGCEEEEEESSSSEEEEEEECTTTEEE----------------------------------------CHHHH
T ss_pred CCeeecCcCEEEEEEEEeCCeEEEEEEECHHHHHH----------------------------------------HHHHH
Confidence 36899999999765555689999999886543222 22344
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeee----cCCceEEeeccCCCCCCChHHHHhcC---CCHHHHHHHHH
Q 002031 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ----SSETVLILEFMDGIRLNDCESLEAFG---VNKQKVVEEIT 275 (977)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~----~~~~vLVmE~i~G~~L~~~~~~~~~~---~~~~~l~~~l~ 275 (977)
+.+.++. . ++ .|.+++. ....+|||||++| +|.++....... .....++..++
T Consensus 69 ~~l~~l~---~--------------Hp--nIv~l~~~~~~~~~~~lv~E~~~g-~L~~~l~~~~~~~~~~~~~~i~~qi~ 128 (432)
T 3p23_A 69 QLLRESD---E--------------HP--NVIRYFCTEKDRQFQYIAIELCAA-TLQEYVEQKDFAHLGLEPITLLQQTT 128 (432)
T ss_dssp HHHHHSC---C--------------CT--TBCCEEEEEEETTEEEEEEECCSE-EHHHHHHSSSCCCCSSCHHHHHHHHH
T ss_pred HHHHhcc---C--------------CC--CcCeEEEEEecCCEEEEEEECCCC-CHHHHHHhcCCCccchhHHHHHHHHH
Confidence 3333321 0 11 1222222 3445899999986 665553211111 12334444444
Q ss_pred HHHHHHHHhcCccccCCCCCCeEEccC---CCCceEEEecccccccCH
Q 002031 276 RAYAHQIYVDGFFNGDPHPGNFLVSKD---PPHRPILLDFGLTKKLSS 320 (977)
Q Consensus 276 ~~~l~~i~~~G~~H~D~hPgNIlv~~~---~~g~i~LiDFG~~~~l~~ 320 (977)
.. +..+|..|++|||+||+|||++.+ +..+++|+|||++..+..
T Consensus 129 ~a-L~~LH~~~ivHrDlKp~NIll~~~~~~~~~~~kL~DFG~a~~~~~ 175 (432)
T 3p23_A 129 SG-LAHLHSLNIVHRDLKPHNILISMPNAHGKIKAMISDFGLCKKLAV 175 (432)
T ss_dssp HH-HHHHHHTTCCCCCCSTTSEEECCCBTTTBCCEEECCTTEEECC--
T ss_pred HH-HHHHHHCcCEeCCCCHHHEEEecCCCCCceeEEEecccceeeccC
Confidence 43 778999999999999999999632 224678999999988764
|
| >3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} SCOP: d.144.1.0 PDB: 3kmw_A* 3rep_A* | Back alignment and structure |
|---|
Probab=99.15 E-value=3.4e-11 Score=129.51 Aligned_cols=137 Identities=16% Similarity=0.101 Sum_probs=90.8
Q ss_pred ccccccccccEEEEEEecCCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCcHHHH
Q 002031 123 ETPLATASIAQVHRATLVDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (977)
Q Consensus 123 ~~piasaSigqV~~A~l~~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea 202 (977)
.+.||+|++|.||+|+. +|+.||||+.+......- +. + .|.+|+
T Consensus 15 ~~~lg~G~~g~V~~~~~-~~~~~avK~~~~~~~~~~--~~-----------------------~----------~~~~E~ 58 (271)
T 3kmu_A 15 LTKLNENHSGELWKGRW-QGNDIVVKVLKVRDWSTR--KS-----------------------R----------DFNEEC 58 (271)
T ss_dssp EEEEEEETTEEEEEEEE-TTEEEEEEEECCTTCCHH--HH-----------------------H----------HHHHHG
T ss_pred HHHhcCCCcceEEEEEE-CCeeEEEEEecccccCHH--HH-----------------------H----------HHHHHH
Confidence 36899999999999998 589999999875321100 00 0 122333
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeee----c--CCceEEeeccCCCCCCChHHHHhc-CCCHHHHHHHHH
Q 002031 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ----S--SETVLILEFMDGIRLNDCESLEAF-GVNKQKVVEEIT 275 (977)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~----~--~~~vLVmE~i~G~~L~~~~~~~~~-~~~~~~l~~~l~ 275 (977)
+.+.++. ++ .|.+++. . ...++||||++|.+|.++...... .++...+...+.
T Consensus 59 ~~l~~l~------------------h~--~iv~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~ 118 (271)
T 3kmu_A 59 PRLRIFS------------------HP--NVLPVLGACQSPPAPHPTLITHWMPYGSLYNVLHEGTNFVVDQSQAVKFAL 118 (271)
T ss_dssp GGGCCCS------------------CT--TEECEEEEECTTTSSSCEEEEECCTTCBHHHHHHSCSSCCCCHHHHHHHHH
T ss_pred HHHHhcC------------------CC--chhheEEEEccCCCCCeEeeecccCCCcHHHHHhhcccCCCCHHHHHHHHH
Confidence 2222211 11 2333332 2 445899999999999877432111 256666666666
Q ss_pred HHH--HHHHHhcC--ccccCCCCCCeEEccCCCCceEEEecccccc
Q 002031 276 RAY--AHQIYVDG--FFNGDPHPGNFLVSKDPPHRPILLDFGLTKK 317 (977)
Q Consensus 276 ~~~--l~~i~~~G--~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~ 317 (977)
+++ +..+|..| ++|+|+||.||+++.+ +.++|.|||+...
T Consensus 119 qi~~~l~~lH~~~~~i~H~dikp~Nil~~~~--~~~~l~~~~~~~~ 162 (271)
T 3kmu_A 119 DMARGMAFLHTLEPLIPRHALNSRSVMIDED--MTARISMADVKFS 162 (271)
T ss_dssp HHHHHHHHHTTSSSCCTTCCCSGGGEEECTT--SCEEEEGGGSCCT
T ss_pred HHHHHHHHHhcCCCceecCCCccceEEEcCC--cceeEEeccceee
Confidence 655 88899999 9999999999999865 7888888887654
|
| >1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A | Back alignment and structure |
|---|
Probab=99.13 E-value=9.7e-11 Score=132.45 Aligned_cols=78 Identities=17% Similarity=0.125 Sum_probs=57.9
Q ss_pred CceEEeeccCCCCCCChHHHH-hcCCCHHHHHHHHHHHH--HHHHHhc-CccccCCCCCCeEEccC----CCCceEEEec
Q 002031 241 ETVLILEFMDGIRLNDCESLE-AFGVNKQKVVEEITRAY--AHQIYVD-GFFNGDPHPGNFLVSKD----PPHRPILLDF 312 (977)
Q Consensus 241 ~~vLVmE~i~G~~L~~~~~~~-~~~~~~~~l~~~l~~~~--l~~i~~~-G~~H~D~hPgNIlv~~~----~~g~i~LiDF 312 (977)
..++|||++ |.+|.++.... ..+++...+...+.+++ +..+|.. |++|+|+||.|||++.+ ..+.++|+||
T Consensus 104 ~~~lv~e~~-~~~L~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~lH~~~~ivH~Dikp~NIll~~~~~~~~~~~~kl~Df 182 (373)
T 1q8y_A 104 HVVMVFEVL-GENLLALIKKYEHRGIPLIYVKQISKQLLLGLDYMHRRCGIIHTDIKPENVLMEIVDSPENLIQIKIADL 182 (373)
T ss_dssp EEEEEECCC-CEEHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHHHTTCEECSCCSGGGEEEEEEETTTTEEEEEECCC
T ss_pred eEEEEEecC-CCCHHHHHHHhhccCCcHHHHHHHHHHHHHHHHHHHhcCCEEecCCChHHeEEeccCCCcCcceEEEccc
Confidence 458999999 77887764321 23366666665555554 8889998 99999999999999642 2247999999
Q ss_pred ccccccC
Q 002031 313 GLTKKLS 319 (977)
Q Consensus 313 G~~~~l~ 319 (977)
|++..+.
T Consensus 183 g~a~~~~ 189 (373)
T 1q8y_A 183 GNACWYD 189 (373)
T ss_dssp TTCEETT
T ss_pred ccccccC
Confidence 9987664
|
| >2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.12 E-value=1.7e-11 Score=135.48 Aligned_cols=77 Identities=14% Similarity=0.190 Sum_probs=56.8
Q ss_pred cCCceEEeeccCCCCCCChHHHHhcCCCHHHHHHHHHHHH--HHHHHhcCccccCCCCCCeEEccCCCCceEEEeccccc
Q 002031 239 SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTK 316 (977)
Q Consensus 239 ~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~ 316 (977)
....++||||++|.+|.++.......++...+...+.+++ +..+|..|++|+|+||.||+++ + +.++|+|||++.
T Consensus 101 ~~~~~iv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~~i~H~dlkp~NIl~~-~--~~~~l~Dfg~~~ 177 (319)
T 2y4i_B 101 PPHLAIITSLCKGRTLYSVVRDAKIVLDVNKTRQIAQEIVKGMGYLHAKGILHKDLKSKNVFYD-N--GKVVITDFGLFS 177 (319)
T ss_dssp SSCEEEECBCCCSEEHHHHTTSSCCCCCSHHHHHHHHHHHHHHHHHHHTTCCCCCCCSTTEEEC-----CCEECCCSCCC
T ss_pred CCceEEEeecccCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCChhhEEEe-C--CCEEEeecCCcc
Confidence 4556899999999998876432222355555555555544 8889999999999999999997 3 789999999986
Q ss_pred cc
Q 002031 317 KL 318 (977)
Q Consensus 317 ~l 318 (977)
..
T Consensus 178 ~~ 179 (319)
T 2y4i_B 178 IS 179 (319)
T ss_dssp --
T ss_pred cc
Confidence 55
|
| >1nd4_A Aminoglycoside 3'-phosphotransferase; protein kinase, ATPase, kanamycin; HET: KAN; 2.10A {Klebsiella pneumoniae} SCOP: d.144.1.6 | Back alignment and structure |
|---|
Probab=99.12 E-value=1.5e-10 Score=123.78 Aligned_cols=89 Identities=17% Similarity=0.125 Sum_probs=62.6
Q ss_pred HhCCChhhcccccCccccc-cccccEEEEEEecCCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHH
Q 002031 109 EFGESMGGMFMDFVETPLA-TASIAQVHRATLVDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDE 187 (977)
Q Consensus 109 elg~~~~~~f~~~d~~pia-saSigqV~~A~l~~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e 187 (977)
++...+.+.+..++-++++ .|+.++||++...+|+.++||+.++...
T Consensus 10 ~~p~~l~~~~~~~~~~~~~~gg~~~~v~~~~~~~g~~~vlK~~~~~~~-------------------------------- 57 (264)
T 1nd4_A 10 GSPAAWVERLFGYDWAQQTIGCSDAAVFRLSAQGRPVLFVKTDLSGAL-------------------------------- 57 (264)
T ss_dssp CCCGGGTTTTTTCEEEECSCTTSSCEEEEEECTTSCCEEEEEECSCTT--------------------------------
T ss_pred cCCHHHHHhcCCCceEecccCCCCceEEEEecCCCCeEEEEeCCcccc--------------------------------
Confidence 3344455555566667786 6667999999887889999998765311
Q ss_pred HhhhcccccCcHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeee----cCCceEEeeccCCCCCC
Q 002031 188 WCKEAPKELDFNSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ----SSETVLILEFMDGIRLN 255 (977)
Q Consensus 188 ~~~~l~~Eld~~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~----~~~~vLVmE~i~G~~L~ 255 (977)
-++..|++.+..+++. .+.||+++. .+..++||||++|.++.
T Consensus 58 --------~~~~~E~~~l~~l~~~------------------~~~vP~~~~~~~~~~~~~~v~e~i~G~~l~ 103 (264)
T 1nd4_A 58 --------NELQDEAARLSWLATT------------------GVPCAAVLDVVTEAGRDWLLLGEVPGQDLL 103 (264)
T ss_dssp --------SCHHHHHHHHHHHHTT------------------TCCBCCEEEEEECSSCEEEEEECCSSEETT
T ss_pred --------hhhhHHHHHHHHHHhC------------------CCCCCeEEEeccCCCCCEEEEEecCCcccC
Confidence 1356677777777541 466888875 23459999999999985
|
| >3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} | Back alignment and structure |
|---|
Probab=99.08 E-value=5.1e-11 Score=137.44 Aligned_cols=76 Identities=8% Similarity=0.067 Sum_probs=50.7
Q ss_pred ceEEeeccCCCCCCChHHHH-h-cC----CCHHHHHHHHHHHH--HHHHHhcCccccCCCCCCeEEccCCCCceEEEecc
Q 002031 242 TVLILEFMDGIRLNDCESLE-A-FG----VNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFG 313 (977)
Q Consensus 242 ~vLVmE~i~G~~L~~~~~~~-~-~~----~~~~~l~~~l~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG 313 (977)
.+++|++. +.+|.++.... . .. ++.......+.+++ +..+|..|++||||||.|||++.+ +.++|+|||
T Consensus 180 ~~~~~~~~-~~~L~~ll~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~iiHrDiKp~NILl~~~--~~~kL~DFG 256 (413)
T 3dzo_A 180 RFFLYPRM-QSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHHYGLVHTYLRPVDIVLDQR--GGVFLTGFE 256 (413)
T ss_dssp EEEEEECC-SEEHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEECTT--CCEEECCGG
T ss_pred eEEEeehh-cCCHHHHHHHhhcccccCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCcccceEEEecC--CeEEEEecc
Confidence 46777766 45666554211 0 00 11122223323333 788999999999999999999966 889999999
Q ss_pred cccccCH
Q 002031 314 LTKKLSS 320 (977)
Q Consensus 314 ~~~~l~~ 320 (977)
+++....
T Consensus 257 ~a~~~~~ 263 (413)
T 3dzo_A 257 HLVRDGA 263 (413)
T ss_dssp GCEETTE
T ss_pred ceeecCC
Confidence 9887554
|
| >3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A* | Back alignment and structure |
|---|
Probab=99.08 E-value=4.4e-11 Score=144.54 Aligned_cols=144 Identities=18% Similarity=0.199 Sum_probs=94.1
Q ss_pred cccccccccEEEEEEe-cCCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCcHHHH
Q 002031 124 TPLATASIAQVHRATL-VDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (977)
Q Consensus 124 ~piasaSigqV~~A~l-~~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea 202 (977)
+.||.|++|.||+|+. .+|+.||||+.++....... -.+.+|+
T Consensus 20 ~~LG~G~fG~Vyla~~~~tg~~VAVKvi~~~~~~~~~------------------------------------~~~~~Ei 63 (676)
T 3qa8_A 20 ERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNR------------------------------------ERWCLEI 63 (676)
T ss_dssp CCCCBCSSSBCCCCCCTTTTCCEEECCCCSCCCHHHH------------------------------------HHHHHHH
T ss_pred EEEeeCCCeEEEEEEECCCCcEEEEEEecccCCHHHH------------------------------------HHHHHHH
Confidence 6799999999999997 47999999988764321110 0234455
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceee------e-cCCceEEeeccCCCCCCChHHHHh--cCCCHHHHHHH
Q 002031 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVI------Q-SSETVLILEFMDGIRLNDCESLEA--FGVNKQKVVEE 273 (977)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~------~-~~~~vLVmE~i~G~~L~~~~~~~~--~~~~~~~l~~~ 273 (977)
+.+.++.+. ..+.+-.++ . ....+|||||++|.+|.++..... .+++...+...
T Consensus 64 ~iL~~L~Hp-----------------nIV~l~~v~~~~~~~~~~~~~~LVmEy~~ggsL~~~L~~~~~~~~lse~~i~~I 126 (676)
T 3qa8_A 64 QIMKKLNHP-----------------NVVSAREVPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTL 126 (676)
T ss_dssp HHHHHCCBT-----------------TBCCEEECCTTTCCCCTTSSCCCEEECCSSCBHHHHHHSSSCTTCCCSSHHHHH
T ss_pred HHHHhCCCC-----------------CCCceeeeecccccccCCCeEEEEEEeCCCCCHHHHHHhcccCCCCCHHHHHHH
Confidence 555554220 011111111 0 344589999999999987643211 12444444444
Q ss_pred HHHHH--HHHHHhcCccccCCCCCCeEEccCCC-CceEEEecccccccCH
Q 002031 274 ITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPP-HRPILLDFGLTKKLSS 320 (977)
Q Consensus 274 l~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~-g~i~LiDFG~~~~l~~ 320 (977)
+.+++ +..+|..|++|+|+||+||+++.++. ..++|+|||++..+..
T Consensus 127 ~~QLl~aL~yLHs~gIVHrDLKP~NILl~~~g~~~~vKL~DFG~a~~~~~ 176 (676)
T 3qa8_A 127 LSDISSALRYLHENRIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELDQ 176 (676)
T ss_dssp HHHHHHHHHHHHHTTBCCCCCCSTTEEEECCSSSCEEEECSCCCCCBTTS
T ss_pred HHHHHHHHHHHHHCCCccCCCCHHHeEeecCCCceeEEEccccccccccc
Confidence 44443 78899999999999999999986521 2389999999987643
|
| >3tm0_A Aminoglycoside 3'-phosphotransferase; protein kinase, phosphorylation, transferase-antibiotic COMP; HET: ANP B31; 2.10A {Enterococcus faecalis} SCOP: d.144.1.6 PDB: 2b0q_A* 1l8t_A* 3q2j_A* 1j7i_A* 1j7u_A* 3h8p_A* 1j7l_A* 2bkk_A* | Back alignment and structure |
|---|
Probab=98.96 E-value=1.9e-09 Score=115.88 Aligned_cols=133 Identities=16% Similarity=0.198 Sum_probs=88.7
Q ss_pred ccccccccEEEEEEecCCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCcHHHHHH
Q 002031 125 PLATASIAQVHRATLVDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEAEN 204 (977)
Q Consensus 125 piasaSigqV~~A~l~~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea~n 204 (977)
..+.+|.++||++.. +|+.++||+.+++... ..-++.+|++.
T Consensus 21 ~~~g~s~~~v~~~~~-~~~~~vlK~~~~~~~~-------------------------------------~~~~~~~E~~~ 62 (263)
T 3tm0_A 21 DTEGMSPAKVYKLVG-ENENLYLKMTDSRYKG-------------------------------------TTYDVEREKDM 62 (263)
T ss_dssp CCSCCSSSEEEEEEC-SSCEEEEEEECGGGTT-------------------------------------STTCHHHHHHH
T ss_pred eccCCCCCeEEEEEC-CCCcEEEEeCCcccCC-------------------------------------CHHHHHHHHHH
Confidence 457788899999985 4789999998753210 01146678887
Q ss_pred HHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeee----cCCceEEeeccCCCCCCChHHHHhcCCCHHHHHHHHHHHHHH
Q 002031 205 TRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ----SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAYAH 280 (977)
Q Consensus 205 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~----~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~l~ 280 (977)
+..+.+ .+.||+++. .+..++||||++|.++.+... ...+...+...+.+. +.
T Consensus 63 l~~l~~-------------------~~~vP~v~~~~~~~~~~~lv~e~i~G~~l~~~~~---~~~~~~~~~~~l~~~-l~ 119 (263)
T 3tm0_A 63 MLWLEG-------------------KLPVPKVLHFERHDGWSNLLMSEADGVLCSEEYE---DEQSPEKIIELYAEC-IR 119 (263)
T ss_dssp HHHHTT-------------------TSCCCCEEEEEEETTEEEEEEECCSSEEHHHHCC---TTTCHHHHHHHHHHH-HH
T ss_pred HHHHhc-------------------CCCCCeEEEEEecCCceEEEEEecCCeehhhccC---CcccHHHHHHHHHHH-HH
Confidence 777642 356888874 345689999999998765310 012233444444433 33
Q ss_pred HHHh-----------------------------------------------------------cCccccCCCCCCeEEcc
Q 002031 281 QIYV-----------------------------------------------------------DGFFNGDPHPGNFLVSK 301 (977)
Q Consensus 281 ~i~~-----------------------------------------------------------~G~~H~D~hPgNIlv~~ 301 (977)
.+|. .+++|+|+||+|||++.
T Consensus 120 ~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~l~HgDl~~~Nil~~~ 199 (263)
T 3tm0_A 120 LFHSIDISDCPYTNSLDSRLAELDYLLNNDLADVDCENWEEDTPFKDPRELYDFLKTEKPEEELVFSHGDLGDSNIFVKD 199 (263)
T ss_dssp HHHHSCCTTCSCBCCHHHHHHHHHHHHHTTCSCCSGGGGSTTCSSSSHHHHHHHHHHCCCCCCEEEECSSCCTTSEEEET
T ss_pred HHhCCCcccCCCcchHHHHHHHHHHHHhccccccccccccccccCCCHHHHHHHHHhcCCCCCceEECCCCCcCcEEEEC
Confidence 3443 56899999999999973
Q ss_pred CCCCceEEEecccccccCH
Q 002031 302 DPPHRPILLDFGLTKKLSS 320 (977)
Q Consensus 302 ~~~g~i~LiDFG~~~~l~~ 320 (977)
+ +.+.||||+.+..-++
T Consensus 200 ~--~~~~lIDwe~a~~gd~ 216 (263)
T 3tm0_A 200 G--KVSGFIDLGRSGRADK 216 (263)
T ss_dssp T--EEEEECCCTTCEEEEH
T ss_pred C--cEEEEEEchhcccCCH
Confidence 2 3346999999887654
|
| >1bsg_A Beta lactamase, penicillinase; hydrolase, antibiotic resistance; 1.85A {Streptomyces albus} SCOP: e.3.1.1 | Back alignment and structure |
|---|
Probab=98.94 E-value=1.5e-08 Score=109.04 Aligned_cols=104 Identities=14% Similarity=0.069 Sum_probs=71.9
Q ss_pred CCCCcceeecchHHHHHHHHHHHHHCCCcCcCCchhhhccccccCCCCCCcHHHHhcC-cCCCCCCcCCCCCCCCcCCCC
Q 002031 526 QPDSLFPVFSVTKGITAGMLHWLVDNGKLKLEENIANIWPEFKSNGKDLIKVHHVLNH-TSGLHNVSVDLSSENPLLICD 604 (977)
Q Consensus 526 t~~T~f~i~SiTK~~ta~~v~~lv~~G~l~ld~~v~~ylP~~~~~~~~~iTir~LLsH-tSGl~~~~~~~~~~~~~~~~~ 604 (977)
++++.|++||++|.+|++++++++++|+|+||++|. ++-.+++.| .||+..... .+....+
T Consensus 34 ~~~~~~~~aS~~K~~~a~~~l~~~~~G~l~l~~~v~-------------~~~~~~~~~~~s~~~~~~~-----~~~~~~t 95 (266)
T 1bsg_A 34 RADELFPMCSVFKTLSSAAVLRDLDRNGEFLSRRIL-------------YTQDDVEQADGAPETGKPQ-----NLANGMT 95 (266)
T ss_dssp STTSCEECGGGGHHHHHHHHHHHTCSSSTTTTCEEC-------------CCHHHHHHHTCCTTTTSHH-----HHHHCEE
T ss_pred CCCCceecHHHHHHHHHHHHHHHHHcCCCCcCceEE-------------eCHHHccCCCCCchhhhcc-----CCCCCcC
Confidence 567899999999999999999999999999999985 455667766 666654210 0111345
Q ss_pred HHHHHHHHHccCCCCCCCCceecccCcHHHHHHHHHHHHhCC-CHHHHHHHHcccccCCCCccC
Q 002031 605 WDECLNRIALSAPETEPGQEQLYHYLSFGWLCGGIIERASGK-KFQEILEEGIIQPLSIDGELY 667 (977)
Q Consensus 605 ~~~~~~~l~~~~~~~~pG~~~~Ysn~~~~~llg~iiE~vtG~-~~~~~l~~~if~PLGm~~t~~ 667 (977)
.++++..+.. ||+ |. ....++|++.|. .+.++ +.+|||++|.+
T Consensus 96 l~~ll~~~i~------------~S~-N~--aa~~L~~~vgG~~~~~~~-----~~~lG~~~t~~ 139 (266)
T 1bsg_A 96 VEELCEVSIT------------ASD-NC--AANLMLRELGGPAAVTRF-----VRSLGDRVTRL 139 (266)
T ss_dssp HHHHHHHHHH------------SCC-HH--HHHHHHHHHTSTHHHHHH-----HHHTTCSSCCC
T ss_pred HHHHHHHHHH------------hCc-HH--HHHHHHHHhcCHHHHHHH-----HHHcCCCceEe
Confidence 6677666542 332 22 345678888874 34443 56799999855
|
| >2j9o_A TLL2115 protein; penicillin-binding protein, hydrolase, lactamase, thioestera DD-peptidase; 1.50A {Synechococcus elongatus} PDB: 2jbf_A* 2j7v_A 2j8y_A* | Back alignment and structure |
|---|
Probab=98.90 E-value=8.5e-09 Score=113.38 Aligned_cols=37 Identities=27% Similarity=0.325 Sum_probs=34.2
Q ss_pred CCCCcceeecchHHHHHHHHHHHHHCCCcCcCCchhh
Q 002031 526 QPDSLFPVFSVTKGITAGMLHWLVDNGKLKLEENIAN 562 (977)
Q Consensus 526 t~~T~f~i~SiTK~~ta~~v~~lv~~G~l~ld~~v~~ 562 (977)
++++.|+.||++|.||++++++++++|++++|++|..
T Consensus 52 ~~~~~~~paS~~K~~ta~a~l~~~e~G~l~l~~~v~~ 88 (298)
T 2j9o_A 52 GGDQVFPAASTIKFPILVAFFKAVDEGRVTLQERLTM 88 (298)
T ss_dssp BTTSCEECGGGGHHHHHHHHHHHHHTTSSCSSCEEEC
T ss_pred CCCCeEecHhHHHHHHHHHHHHHHHcCCCCccceEEc
Confidence 4578999999999999999999999999999999864
|
| >1hzo_A Beta-lactamase; mixed alpha/beta, cephalosporinase, hydrolase; HET: MES; 1.75A {Proteus vulgaris} SCOP: e.3.1.1 | Back alignment and structure |
|---|
Probab=98.88 E-value=4.7e-08 Score=105.76 Aligned_cols=131 Identities=13% Similarity=0.071 Sum_probs=80.4
Q ss_pred hHHHHHHHHHHHhccCCCccceEEEEE--ecCeeEEEeeccccCCCCCCCCCCCCcceeecchHHHHHHHHHHHHHCCCc
Q 002031 477 DVEAKLRDFLVELGNDGKILGIQVCAY--KDGEVIIDTSAGMLGRYDPRPVQPDSLFPVFSVTKGITAGMLHWLVDNGKL 554 (977)
Q Consensus 477 ~~~~~l~~~l~~~~~~~~~pG~svaVv--~~g~~v~~~~~G~~~~~~~~~~t~~T~f~i~SiTK~~ta~~v~~lv~~G~l 554 (977)
.+++.+++++++.-. -.++.|+ ..|+++ .+ +++..|++||++|.+|++++++++++|++
T Consensus 5 ~l~~~l~~~~~~~~~-----~~~v~v~d~~tg~~~---~~-----------n~~~~~~~aS~~K~~ta~~~l~~v~~G~l 65 (271)
T 1hzo_A 5 TIEEQLNTLEKYSQG-----RLGVALINTEDNSQI---TY-----------RGEERFAMASTSKVMAVAAVLKASEKQAG 65 (271)
T ss_dssp HHHHHHHHHHHHHTS-----EEEEEEEETTTTEEE---EE-----------STTSCEECGGGGHHHHHHHHHHHHHHSTT
T ss_pred HHHHHHHHHHHhcCC-----cEEEEEEECCCCCEE---EE-----------CCCCcchhHHHHHHHHHHHHHHHHhCCCC
Confidence 455666666655421 2334444 467764 22 56789999999999999999999999999
Q ss_pred CcCCchhhhccccccCCCCCCcHHHHhcCcCCCCCCcCCCCCCCCcCCCCHHHHHHHHHccCCCCCCCCceecccCcHHH
Q 002031 555 KLEENIANIWPEFKSNGKDLIKVHHVLNHTSGLHNVSVDLSSENPLLICDWDECLNRIALSAPETEPGQEQLYHYLSFGW 634 (977)
Q Consensus 555 ~ld~~v~~ylP~~~~~~~~~iTir~LLsHtSGl~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~pG~~~~Ysn~~~~~ 634 (977)
+||++|.- +-++++. .||+.... +....+.++++..+... -+|..
T Consensus 66 ~ld~~v~~-------------~~~~~~~-~s~~~~~~-------~~~~~t~~~ll~~~i~~-----------S~N~a--- 110 (271)
T 1hzo_A 66 LLDKNITI-------------KKSDLVA-YSPITEKH-------LTTGMTLAELSAATLQY-----------SDNTA--- 110 (271)
T ss_dssp GGGCEECC-------------CGGGCCS-CCTTGGGC-------TTTCEEHHHHHHHHHHT-----------CCHHH---
T ss_pred CCCceEEe-------------CHHHccC-CChhhhhC-------CCCCcCHHHHHHHHHHc-----------CCHHH---
Confidence 99999862 2222222 23333211 11234667776655431 12333
Q ss_pred HHHHHHHHHhC-CCHHHHHHHHcccccCCCCccC
Q 002031 635 LCGGIIERASG-KKFQEILEEGIIQPLSIDGELY 667 (977)
Q Consensus 635 llg~iiE~vtG-~~~~~~l~~~if~PLGm~~t~~ 667 (977)
...++|++.| ..+.++ +.+|||++|.+
T Consensus 111 -a~~L~~~~gG~~~~~~~-----~~~lG~~~t~~ 138 (271)
T 1hzo_A 111 -MNKILDYLGGPAKVTQF-----ARSINDVTYRL 138 (271)
T ss_dssp -HHHHHHHHTSHHHHHHH-----HHHTTCSSCCC
T ss_pred -HHHHHHHhCCHHHHHHH-----HHHcCCCceee
Confidence 4457888887 334333 46899999855
|
| >2qpn_A Beta-lactamase GES-1; APO-enzyme, plasmid, hydrolase; 1.10A {Klebsiella pneumoniae} PDB: 3nia_A* 3ni9_A* | Back alignment and structure |
|---|
Probab=98.81 E-value=3.7e-08 Score=107.57 Aligned_cols=36 Identities=17% Similarity=0.174 Sum_probs=33.8
Q ss_pred CCCCcceeecchHHHHHHHHHHHHHCCCcCcCCchh
Q 002031 526 QPDSLFPVFSVTKGITAGMLHWLVDNGKLKLEENIA 561 (977)
Q Consensus 526 t~~T~f~i~SiTK~~ta~~v~~lv~~G~l~ld~~v~ 561 (977)
++++.|+.||++|.+|++++++++++|+++||++|.
T Consensus 55 ~~~~~~~~aS~~K~~ta~~~l~~~~~G~l~ld~~v~ 90 (287)
T 2qpn_A 55 RMAQRFAMCSTFKFPLAALVFERIDSGTERGDRKLS 90 (287)
T ss_dssp STTSCEECGGGGHHHHHHHHHHHHHHTSSCTTCEEE
T ss_pred CCCCceecHHHHHHHHHHHHHHHHHcCCCCCCceEE
Confidence 467899999999999999999999999999999986
|
| >2p74_A Beta-lactamase CTX-M-9A; ultra-high resolution, acylation, ESBL, hydrolase; HET: PO4; 0.88A {Escherichia coli} PDB: 3g2y_A* 4dds_A* 4ddy_A* 4de0_A* 4de1_A* 4de2_A* 4de3_A* 1ylj_A* 1yly_A* 1ym1_A* 1yms_A* 1ymx_A* 3g2z_A* 3g30_A* 3g31_A* 3g32_A* 3g34_A* 3g35_A* 1ylt_A* 1ylz_A* ... | Back alignment and structure |
|---|
Probab=98.76 E-value=1.4e-07 Score=101.35 Aligned_cols=66 Identities=21% Similarity=0.221 Sum_probs=48.1
Q ss_pred hHHHHHHHHHHHhccCCCccceEEEEE--ecCeeEEEeeccccCCCCCCCCCCCCcceeecchHHHHHHHHHHHHHCCCc
Q 002031 477 DVEAKLRDFLVELGNDGKILGIQVCAY--KDGEVIIDTSAGMLGRYDPRPVQPDSLFPVFSVTKGITAGMLHWLVDNGKL 554 (977)
Q Consensus 477 ~~~~~l~~~l~~~~~~~~~pG~svaVv--~~g~~v~~~~~G~~~~~~~~~~t~~T~f~i~SiTK~~ta~~v~~lv~~G~l 554 (977)
.+++.+++++++.- .. .++.|+ ..|+++ .+ ++++.|+.||++|.+|++++++++++|++
T Consensus 4 ~l~~~l~~~~~~~~----~~-~~~~v~d~~tG~~l---~~-----------~~~~~~~~aS~~K~~ta~~~l~~~~~g~~ 64 (263)
T 2p74_A 4 AVQQKLAALEKSSG----GR-LGVALIDTADNTQV---LY-----------RGDERFPMCSTSKVMAAAAVLKQSETQKQ 64 (263)
T ss_dssp HHHHHHHHHHHHHT----SE-EEEEEEETTTTEEE---EE-----------STTSCEECGGGGHHHHHHHHHHHHTTCTT
T ss_pred hHHHHHHHHHHhcC----Cc-EEEEEEECCCCCeE---ee-----------CCCCccccHHHHHHHHHHHHHHHHHcCCC
Confidence 44556666665532 11 223343 467765 22 45789999999999999999999999999
Q ss_pred CcCCchh
Q 002031 555 KLEENIA 561 (977)
Q Consensus 555 ~ld~~v~ 561 (977)
++|++|.
T Consensus 65 ~l~~~v~ 71 (263)
T 2p74_A 65 LLNQPVE 71 (263)
T ss_dssp GGGCEEE
T ss_pred CcCCeEE
Confidence 9999986
|
| >1e25_A Extended-spectrum beta-lactamase PER-1; hydrolase, antibiotic resistance, class A cephalosporinase; 1.9A {Pseudomonas aeruginosa} SCOP: e.3.1.1 | Back alignment and structure |
|---|
Probab=98.76 E-value=6.9e-08 Score=105.03 Aligned_cols=37 Identities=35% Similarity=0.395 Sum_probs=34.5
Q ss_pred CCCCcceeecchHHHHHHHHHHHHHCCCcCcCCchhh
Q 002031 526 QPDSLFPVFSVTKGITAGMLHWLVDNGKLKLEENIAN 562 (977)
Q Consensus 526 t~~T~f~i~SiTK~~ta~~v~~lv~~G~l~ld~~v~~ 562 (977)
++++.|+.||++|.+|++++++++++|+|+||++|.-
T Consensus 36 ~~~~~~~~aS~~K~~ta~~~l~~~~~G~l~ld~~v~~ 72 (282)
T 1e25_A 36 NPFEKFPMQSVFKLHLAMLVLHQVDQGKLDLNQTVIV 72 (282)
T ss_dssp STTCCEECGGGHHHHHHHHHHHHHHTTSSCTTCEEEE
T ss_pred CCCCceecHHHHHHHHHHHHHHHHHcCCCCCCCeEEe
Confidence 5678999999999999999999999999999999863
|
| >1g6a_A Beta-lactamase PSE-4; class A beta-lactamase, carbenicillinase, R234K mutant, hydrolase; 1.75A {Pseudomonas aeruginosa} SCOP: e.3.1.1 PDB: 1g68_A | Back alignment and structure |
|---|
Probab=98.76 E-value=1e-07 Score=103.06 Aligned_cols=68 Identities=24% Similarity=0.352 Sum_probs=49.3
Q ss_pred cchHHHHHHHHHHHhccCCCccceEEEEE--ecCeeEEEeeccccCCCCCCCCCCCCcceeecchHHHHHHHHHHHHHCC
Q 002031 475 HSDVEAKLRDFLVELGNDGKILGIQVCAY--KDGEVIIDTSAGMLGRYDPRPVQPDSLFPVFSVTKGITAGMLHWLVDNG 552 (977)
Q Consensus 475 ~~~~~~~l~~~l~~~~~~~~~pG~svaVv--~~g~~v~~~~~G~~~~~~~~~~t~~T~f~i~SiTK~~ta~~v~~lv~~G 552 (977)
...+.+.+++++++. ... .++.|+ ..|+++ .+ ++++.|++||++|.+|++++++++++|
T Consensus 5 ~~~l~~~l~~~~~~~----~~~-~~~~v~d~~tg~~~---~~-----------~~~~~~~~aS~~K~~~a~~~l~~~~~G 65 (271)
T 1g6a_A 5 FQQVEQDVKAIEVSL----SAR-IGVSVLDTQNGEYW---DY-----------NGNQRFPLTSTFKTIACAKLLYDAEQG 65 (271)
T ss_dssp THHHHHHHHHHHHHT----TCE-EEEEEEETTTTEEE---EE-----------STTSCEECGGGGHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHhc----CCe-EEEEEEECCCCCEE---EE-----------CCCCccccHHHHHHHHHHHHHHHHHCC
Confidence 345566666666543 222 234444 467764 12 457899999999999999999999999
Q ss_pred CcCcCCchh
Q 002031 553 KLKLEENIA 561 (977)
Q Consensus 553 ~l~ld~~v~ 561 (977)
+++||++|.
T Consensus 66 ~l~l~~~v~ 74 (271)
T 1g6a_A 66 KVNPNSTVE 74 (271)
T ss_dssp SCCTTCEEE
T ss_pred CCCccceEE
Confidence 999999985
|
| >3dxp_A Putative acyl-COA dehydrogenase; protein kinase-like fold, structural genomics, joint center structural genomics, JCSG; 2.32A {Ralstonia eutropha JMP134} | Back alignment and structure |
|---|
Probab=98.72 E-value=3.2e-08 Score=111.52 Aligned_cols=164 Identities=13% Similarity=0.174 Sum_probs=100.2
Q ss_pred CCCCCHHHHHHHHHHHhCCChhhcccccCccccccccccEEEEEEecCCCEEEEEEec--CChhhhhHhhHHHHHHHHHH
Q 002031 94 LPPRPVQEVSQTIEREFGESMGGMFMDFVETPLATASIAQVHRATLVDGRQVVVKVQH--QGIKTIILEDLKNAKSIVDW 171 (977)
Q Consensus 94 ~p~~~~~~v~~~l~~elg~~~~~~f~~~d~~piasaSigqV~~A~l~~G~~VAVKv~~--p~i~~~~~~Dl~~l~~l~~~ 171 (977)
...++.+.+.+.+.+.++.. . ...+.++++.|..+.||+.+.. +..+++|+.+ ++....
T Consensus 18 ~~~ld~~~l~~~l~~~~~~~-~---~~~~~~~l~~G~sn~~y~v~~~-~~~~vlr~~~~p~~~~~~-------------- 78 (359)
T 3dxp_A 18 QQRFDTEALEAWMRQHVEGF-A---GPLSVEQFKGGQSNPTFKLVTP-GQTYVMRAKPGPKSKLLP-------------- 78 (359)
T ss_dssp --CCCHHHHHHHHHHHSTTC-C---CCCEEEECCC-CCSCEEEEECS-SCEEEEECCCC---------------------
T ss_pred ccCCCHHHHHHHHHHhCCCC-C---CCceEEEcCCcccceEEEEEEC-CceEEEEeCCCCCCCCCC--------------
Confidence 34567888888888876421 1 1234578999999999999874 5789999876 542100
Q ss_pred HHhhCCCCCCchhHHHHhhhcccccCcHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeee-c------CCceE
Q 002031 172 IAWAEPQYDFNPIIDEWCKEAPKELDFNSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-S------SETVL 244 (977)
Q Consensus 172 ~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~------~~~vL 244 (977)
..-++.+|++.+..+.+ ..+.||+++. + +..++
T Consensus 79 ----------------------~~~~~~~E~~~l~~L~~------------------~~vpvP~~~~~~~~~~~~g~~~~ 118 (359)
T 3dxp_A 79 ----------------------SAHAIEREYRVMDALAG------------------TDVPVAKMYALCEDESVIGRAFY 118 (359)
T ss_dssp -------------------------CHHHHHHHHHHHTT------------------SSSCCCCEEEEECCTTTTSSCEE
T ss_pred ----------------------cHHHHHHHHHHHHHhhc------------------CCCCCCcEEEECCCCCccCCeEE
Confidence 11256677777776643 2467888885 2 23689
Q ss_pred EeeccCCCCCCChHHHHhcCCCH---HHHHHHHHHHHHHHHH--------------------------------------
Q 002031 245 ILEFMDGIRLNDCESLEAFGVNK---QKVVEEITRAYAHQIY-------------------------------------- 283 (977)
Q Consensus 245 VmE~i~G~~L~~~~~~~~~~~~~---~~l~~~l~~~~l~~i~-------------------------------------- 283 (977)
||||++|..+.+... ...+. ..+...+.+. +..+|
T Consensus 119 vme~v~G~~l~~~~~---~~l~~~~~~~~~~~l~~~-La~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 194 (359)
T 3dxp_A 119 IMEFVSGRVLWDQSL---PGMSPAERTAIYDEMNRV-IAAMHTVDYQAIGLGDYGKPGNYFQRQIERWTKQYKLSETESI 194 (359)
T ss_dssp EEECCCCBCCCCTTC---TTCCHHHHHHHHHHHHHH-HHHHHHSCTTTTTCTTSSCCSCHHHHHHHHHHHHHHHHCCSCC
T ss_pred EEEecCCeecCCCcc---ccCCHHHHHHHHHHHHHH-HHHHhCCCchhccccccCCCCCchHHHHHHHHHHHHhcCCcCC
Confidence 999999998854100 01111 1122222221 11222
Q ss_pred --------------------hcCccccCCCCCCeEEccCCCCceEEEecccccccCH
Q 002031 284 --------------------VDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 320 (977)
Q Consensus 284 --------------------~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 320 (977)
..+++|+|+||+|||++.++...+.||||+.+..-++
T Consensus 195 ~~~~~~~~~l~~~~~~~~~~~~~lvHgD~~~~Nil~~~~~~~v~~viDwe~a~~g~p 251 (359)
T 3dxp_A 195 PAMDSLMDWLPQHIPQEDADLTSIVHGDYRLDNLMFHPTEPRVLAVLDWELSTLGHP 251 (359)
T ss_dssp HHHHHHHHHGGGCCCSTTSSCCEEECSSCSGGGEEECSSSSCEEEECCCTTCEEECH
T ss_pred hHHHHHHHHHHhcCCCccCCCceEEeCCCCCCcEEEeCCCCcEEEEECccccccCCH
Confidence 2579999999999999865222258999999886554
|
| >1m40_A TEM-1, beta-lactamase TEM; acylation mechanism, ultra- high resolution, hydrolase; HET: CB4; 0.85A {Escherichia coli} SCOP: e.3.1.1 PDB: 1jwp_A* 1nxy_A* 1ny0_A* 1nym_A* 1nyy_A* 1pzo_A* 1erm_A* 1ero_A* 1erq_A* 1s0w_A 1xpb_A 1li0_A 1htz_A 1jtd_A 1esu_A 1jwz_A* 1li9_A 1jwv_A* 1jtg_A 1axb_A* ... | Back alignment and structure |
|---|
Probab=98.72 E-value=3.5e-07 Score=98.28 Aligned_cols=67 Identities=24% Similarity=0.377 Sum_probs=48.5
Q ss_pred hHHHHHHHHHHHhccCCCccceEEEEE--ecCeeEEEeeccccCCCCCCCCCCCCcceeecchHHHHHHHHHHHHHCCCc
Q 002031 477 DVEAKLRDFLVELGNDGKILGIQVCAY--KDGEVIIDTSAGMLGRYDPRPVQPDSLFPVFSVTKGITAGMLHWLVDNGKL 554 (977)
Q Consensus 477 ~~~~~l~~~l~~~~~~~~~pG~svaVv--~~g~~v~~~~~G~~~~~~~~~~t~~T~f~i~SiTK~~ta~~v~~lv~~G~l 554 (977)
.+.+.+++++++.- .. .++.|+ ..|++++. + ++++.|+.||++|.+|+++++.++++|++
T Consensus 3 ~l~~~l~~~~~~~~----~~-~~~~v~d~~tG~~l~~--~-----------~~~~~~~~aS~~K~~ta~~~l~~~~~G~~ 64 (263)
T 1m40_A 3 ETLVKVKDAEDQLG----AR-VGYIELDLNSGKILES--F-----------RPEERFPMMSTFKVLLCGAVLSRVDAGQE 64 (263)
T ss_dssp HHHHHHHHHHHHHT----SE-EEEEEEETTTCCEEEE--E-----------STTSCEECGGGHHHHHHHHHHHHHHTTSC
T ss_pred hHHHHHHHHHHhcC----Ce-EEEEEEECCCCCEeee--e-----------CCCCccccHHHHHHHHHHHHHHHHhCCCC
Confidence 34455555555432 11 223344 47887752 1 45789999999999999999999999999
Q ss_pred CcCCchh
Q 002031 555 KLEENIA 561 (977)
Q Consensus 555 ~ld~~v~ 561 (977)
++|++|.
T Consensus 65 ~l~~~v~ 71 (263)
T 1m40_A 65 QLGRRIH 71 (263)
T ss_dssp CTTCEEC
T ss_pred CCCceEE
Confidence 9999986
|
| >1bue_A Protein (imipenem-hydrolysing beta-lactamase); hydrolase, antibiotic resistance, class A carbapenemase; 1.64A {Enterobacter cloacae} SCOP: e.3.1.1 PDB: 1bul_A* 1dy6_A | Back alignment and structure |
|---|
Probab=98.72 E-value=1.7e-07 Score=100.96 Aligned_cols=66 Identities=20% Similarity=0.295 Sum_probs=48.6
Q ss_pred hHHHHHHHHHHHhccCCCccceEEEEE--ecCeeEEEeeccccCCCCCCCCCCCCcceeecchHHHHHHHHHHHHHCCCc
Q 002031 477 DVEAKLRDFLVELGNDGKILGIQVCAY--KDGEVIIDTSAGMLGRYDPRPVQPDSLFPVFSVTKGITAGMLHWLVDNGKL 554 (977)
Q Consensus 477 ~~~~~l~~~l~~~~~~~~~pG~svaVv--~~g~~v~~~~~G~~~~~~~~~~t~~T~f~i~SiTK~~ta~~v~~lv~~G~l 554 (977)
.+++.+++++++.-. . .++.|+ ..|+++ .+ ++++.|++||++|.+|++++++++++|++
T Consensus 3 ~~~~~l~~~~~~~~~----~-~~v~v~d~~tg~~~---~~-----------~~~~~~~~aS~~K~~~a~~~l~~~~~g~l 63 (265)
T 1bue_A 3 KGIDEIKNLETDFNG----R-IGVYALDTGSGKSF---SY-----------RANERFPLCSSFKGFLAAAVLKGSQDNRL 63 (265)
T ss_dssp TTHHHHHHHHHHHTS----E-EEEEEEETTTCCEE---EE-----------STTSCEECGGGGHHHHHHHHHHHHHTTSS
T ss_pred hhHHHHHHHHHhcCC----e-EEEEEEECCCCCEE---EE-----------CCCCccccHHHHHHHHHHHHHHHHhcCCC
Confidence 345566666665421 1 234444 467765 12 45788999999999999999999999999
Q ss_pred CcCCchh
Q 002031 555 KLEENIA 561 (977)
Q Consensus 555 ~ld~~v~ 561 (977)
+||++|.
T Consensus 64 ~ld~~v~ 70 (265)
T 1bue_A 64 NLNQIVN 70 (265)
T ss_dssp CTTCEEC
T ss_pred CcCceEE
Confidence 9999986
|
| >1o7e_A L2 beta lactamase; hydrolase, class A; 1.51A {Stenotrophomonas maltophilia} SCOP: e.3.1.1 PDB: 1n4o_A | Back alignment and structure |
|---|
Probab=98.70 E-value=6.7e-08 Score=104.87 Aligned_cols=36 Identities=19% Similarity=0.261 Sum_probs=33.8
Q ss_pred CCCCcceeecchHHHHHHHHHHHHHCCCcCcCCchh
Q 002031 526 QPDSLFPVFSVTKGITAGMLHWLVDNGKLKLEENIA 561 (977)
Q Consensus 526 t~~T~f~i~SiTK~~ta~~v~~lv~~G~l~ld~~v~ 561 (977)
+++..|+.||++|.+|++++++++++|+++||++|.
T Consensus 47 n~~~~~~~aS~~K~~ta~~~l~~~~~G~l~l~~~v~ 82 (276)
T 1o7e_A 47 RQDERFPMCSTFKSMLAATVLSQAERMPALLDRRVP 82 (276)
T ss_dssp STTSCEECGGGGHHHHHHHHHHHHTTCTTTTTCEEE
T ss_pred CCCCccccHHHHHHHHHHHHHHHHHCCCCCCCceEE
Confidence 467899999999999999999999999999999986
|
| >3c5a_A Class A carbapenemase KPC-2; beta-lactamase, C-terminal deleted mutant, plasmid, hydrolase; HET: CIT; 1.23A {Escherichia coli} PDB: 3rxw_A* 3rxx_A* 2ods_A 2ov5_A* 3e2k_A 3e2l_A* | Back alignment and structure |
|---|
Probab=98.67 E-value=3.4e-07 Score=98.35 Aligned_cols=36 Identities=22% Similarity=0.230 Sum_probs=33.7
Q ss_pred CCCCcceeecchHHHHHHHHHHHHHCCCcCcCCchh
Q 002031 526 QPDSLFPVFSVTKGITAGMLHWLVDNGKLKLEENIA 561 (977)
Q Consensus 526 t~~T~f~i~SiTK~~ta~~v~~lv~~G~l~ld~~v~ 561 (977)
++++.|++||++|.+|++++++++++|+++||++|.
T Consensus 35 ~~~~~~~~aS~~K~~~a~~~l~~~~~G~l~l~~~v~ 70 (264)
T 3c5a_A 35 RAEERFPLCSSFKGFLAAAVLARSQQQAGLLDTPIR 70 (264)
T ss_dssp STTSCEECGGGHHHHHHHHHHHHHHHSTTSTTCEEC
T ss_pred CCCCceecHHHHHHHHHHHHHHHHHCCCCCCCcEEE
Confidence 457899999999999999999999999999999986
|
| >3f7w_A Putative fructosamine-3-kinase; YP_290396.1, structural GENO joint center for structural genomics, JCSG, protein structu initiative, PSI-2; 1.85A {Thermobifida fusca YX} | Back alignment and structure |
|---|
Probab=98.62 E-value=1e-07 Score=103.98 Aligned_cols=97 Identities=16% Similarity=0.227 Sum_probs=73.6
Q ss_pred HHHHHHHHHHhCCChhhcccccCccccccccccEEEEEEecCCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCC
Q 002031 100 QEVSQTIEREFGESMGGMFMDFVETPLATASIAQVHRATLVDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQY 179 (977)
Q Consensus 100 ~~v~~~l~~elg~~~~~~f~~~d~~piasaSigqV~~A~l~~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~ 179 (977)
+.|.+.+.+.+|.++..+ +++|.|..++||+.++.||++|+||+..++....
T Consensus 3 ~~v~a~~~~l~G~~v~~v------~~~g~G~~~~vyrv~l~DG~~~~vK~~~~~~~~~---------------------- 54 (288)
T 3f7w_A 3 NSVAARVTELTGREVAAV------AERGHSHRWHLYRVELADGTPLFVKALPDDAPAL---------------------- 54 (288)
T ss_dssp HHHHHHHHHHHCCCEEEE------EEEEEETTEEEEEEEETTSCEEEEEECCTTCCCC----------------------
T ss_pred HHHHHHHHHhcCCCeEEE------EecCCCCCeEEEEEEECCCCEEEEEEeCCCCcch----------------------
Confidence 567788888899876554 7899999999999999999999999876542110
Q ss_pred CCchhHHHHhhhcccccCcHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeeecCCceEEeeccCCCCCCC
Q 002031 180 DFNPIIDEWCKEAPKELDFNSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQSSETVLILEFMDGIRLND 256 (977)
Q Consensus 180 ~~~~~~~e~~~~l~~Eld~~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~~~~~vLVmE~i~G~~L~~ 256 (977)
.-.|..|++.++.+++ ...+.||+++..+..++||||+++.....
T Consensus 55 ---------------~~~~~~Ea~~L~~L~~-----------------~~~vpvP~v~~~~~~~lv~e~l~~~~~~~ 99 (288)
T 3f7w_A 55 ---------------DGLFRAEALGLDWLGR-----------------SFGSPVPQVAGWDDRTLAMEWVDERPPTP 99 (288)
T ss_dssp ---------------TTHHHHHHHHHHHHTC-----------------STTCCSCCEEEEETTEEEEECCCCCCCCH
T ss_pred ---------------hhHHHHHHHHHHHHHh-----------------hCCCCcceEEeccCceEEEEeecccCCCh
Confidence 0024568887777643 23578999998777899999999887654
|
| >1n9b_A Penicillinase, beta-lactamase SHV-2; beta-lactam hydrolase, detergent binding, drug design, radiation damage; HET: MA4 EPE; 0.90A {Klebsiella pneumoniae} SCOP: e.3.1.1 PDB: 3d4f_A* 2zd8_A* 1q2p_A* 1shv_A* 1vm1_A* 2g2u_A 2h5s_A* 1ong_A* 3c4o_A 3c4p_A 3mke_A* 3mkf_A* 3mxr_A* 3mxs_A* 3n4i_A 2a3u_A* 3opr_A* 3opl_A* 3oph_A* 3opp_A* ... | Back alignment and structure |
|---|
Probab=98.61 E-value=5.5e-07 Score=96.95 Aligned_cols=68 Identities=21% Similarity=0.240 Sum_probs=50.0
Q ss_pred hHHHHHHHHHHHhccCCCccceEEEEE--ecCeeEEEeeccccCCCCCCCCCCCCcceeecchHHHHHHHHHHHHHCCCc
Q 002031 477 DVEAKLRDFLVELGNDGKILGIQVCAY--KDGEVIIDTSAGMLGRYDPRPVQPDSLFPVFSVTKGITAGMLHWLVDNGKL 554 (977)
Q Consensus 477 ~~~~~l~~~l~~~~~~~~~pG~svaVv--~~g~~v~~~~~G~~~~~~~~~~t~~T~f~i~SiTK~~ta~~v~~lv~~G~l 554 (977)
++++.+++++++.- .. .++.|+ ..|++++. + ++++.|+.||++|.+|+++++.++++|++
T Consensus 3 ~l~~~l~~~~~~~~----~~-~~v~v~d~~tg~~l~~--~-----------~~~~~~~~aS~~K~~~a~~~l~~~~~G~l 64 (265)
T 1n9b_A 3 QPLEQIKLSESQLS----GR-VGMIEMDLASGRTLTA--W-----------RADERFPMMSTFKVVLCGAVLARVDAGDE 64 (265)
T ss_dssp CHHHHHHHHHHHHT----SE-EEEEEEETTTCCEEEE--E-----------STTSCEECGGGHHHHHHHHHHHHHHTTSC
T ss_pred hHHHHHHHHHHhcC----Cc-EEEEEEECCCCcEeee--e-----------CCCCeeecHHHHHHHHHHHHHHHHHCCCC
Confidence 45566666665542 11 234444 46777652 1 45788999999999999999999999999
Q ss_pred CcCCchhh
Q 002031 555 KLEENIAN 562 (977)
Q Consensus 555 ~ld~~v~~ 562 (977)
++|++|.-
T Consensus 65 ~l~~~v~~ 72 (265)
T 1n9b_A 65 QLERKIHY 72 (265)
T ss_dssp CTTCEECC
T ss_pred CCCCeEEe
Confidence 99999863
|
| >4gkh_A Aminoglycoside 3'-phosphotransferase APHA1-IAB; pyrazolopyrimidine, 1-Na-PP1, bumped kinase inhibitor, BKI, kinase inhibitor; HET: KAN 0J9; 1.86A {Acinetobacter baumannii} PDB: 4feu_A* 4few_A* 4fex_A* 4fev_A* 4gki_A* 4ej7_A* 3r78_A* | Back alignment and structure |
|---|
Probab=98.56 E-value=2.1e-07 Score=100.20 Aligned_cols=34 Identities=15% Similarity=0.073 Sum_probs=27.5
Q ss_pred CccccCCCCCCeEEccCCCCceEEEecccccccCHH
Q 002031 286 GFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSSS 321 (977)
Q Consensus 286 G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~~ 321 (977)
.++|+|+||+|||++.+ +.+.||||+.+..-++.
T Consensus 194 ~l~HGDl~~~Nil~~~~--~~~~viDwe~a~~gdp~ 227 (272)
T 4gkh_A 194 VVTHGDFSLDNLIFDEG--KLIGCIDVGRVGIADRY 227 (272)
T ss_dssp EEECSCCCTTSEEEETT--EEEEECCCTTCEEEETH
T ss_pred EEEcCCCCCCeEEEECC--eEEEEEECcccccCCHH
Confidence 48999999999999843 45679999999876553
|
| >2wk0_A Beta-lactamase; hydrolase, iodopenicillanate, antibiotic resistance; HET: BIY CIT; 1.65A {Bacillus licheniformis} PDB: 2x71_A* 3b3x_A* 1i2s_A* 1i2w_A* 2y91_A* 2blm_A 4blm_A 3sh9_A* 3sh7_A* 3sh8_A* 3ly3_A 3kgo_A* 3ly4_A* 3kgm_A* 3kgn_A* 3m2j_A* 3m2k_A* 3soi_A* 1mbl_A | Back alignment and structure |
|---|
Probab=98.52 E-value=6.3e-07 Score=96.44 Aligned_cols=100 Identities=17% Similarity=0.145 Sum_probs=63.9
Q ss_pred CCCCcceeecchHHHHHHHHHHHHHCCCcCcCCchhhhccccccCCCCCCcHHHHhcCcCCCCCCcCCCCCCCCcCCCCH
Q 002031 526 QPDSLFPVFSVTKGITAGMLHWLVDNGKLKLEENIANIWPEFKSNGKDLIKVHHVLNHTSGLHNVSVDLSSENPLLICDW 605 (977)
Q Consensus 526 t~~T~f~i~SiTK~~ta~~v~~lv~~G~l~ld~~v~~ylP~~~~~~~~~iTir~LLsHtSGl~~~~~~~~~~~~~~~~~~ 605 (977)
+++..|+.||++|.+|+++++.++++| +||++|. ++.++++.| +|+.... +....+.
T Consensus 35 ~~~~~~~~aS~~K~~~a~~~l~~~~~g--~l~~~v~-------------~~~~~~~~~-~~~~~~~-------~~~~~t~ 91 (265)
T 2wk0_A 35 RPDERFAFASTIKALTVGVLLQQKSIE--DLNQRIT-------------YTRDDLVNY-NPITEKH-------VDTGMTL 91 (265)
T ss_dssp STTCEEECGGGHHHHHHHHHHHHCCTG--GGGCEEC-------------CCTTTCCSC-CTTGGGC-------TTTCEEH
T ss_pred CCCCceecHHHHHHHHHHHHHHHHhCC--CCCCeEE-------------eCHHHccCC-CcccccC-------CCCCccH
Confidence 567899999999999999999999999 9998875 222333344 3433211 1123566
Q ss_pred HHHHHHHHccCCCCCCCCceecccCcHHHHHHHHHHHHhCCCHHHHHHHHcccccCCCCccC
Q 002031 606 DECLNRIALSAPETEPGQEQLYHYLSFGWLCGGIIERASGKKFQEILEEGIIQPLSIDGELY 667 (977)
Q Consensus 606 ~~~~~~l~~~~~~~~pG~~~~Ysn~~~~~llg~iiE~vtG~~~~~~l~~~if~PLGm~~t~~ 667 (977)
++++..+.. ||+ |. ....+++++.| .+-+++ .+.+|||++|.+
T Consensus 92 ~~ll~~~i~------------~S~-N~--aa~~L~~~lgG---~~~~~~-~~~~lG~~~t~~ 134 (265)
T 2wk0_A 92 KELADASLR------------YSD-NT--AQNLILKQIGG---PESLKK-ELRKIGDEVTNP 134 (265)
T ss_dssp HHHHHHHHH------------HCC-HH--HHHHHHHHTTH---HHHHHH-HHHHTTCCSCCC
T ss_pred HHHHHHHHH------------hCC-HH--HHHHHHHHhCC---HHHHHH-HHHHcCCCceee
Confidence 777665542 332 22 24567777776 123433 356899999855
|
| >3sg8_A APH(2'')-ID; antibiotic resistance enzyme, transferase, aminoglycoside, phosphorylation, transferase-antibiotic complex; HET: TOY; 1.80A {Enterococcus casseliflavus} PDB: 3sg9_A* 3n4v_A 3n4t_A 3n4u_A 3r81_A* 3r80_A* 3r7z_A* 3r82_A* 3vcq_A* 4dbx_A 4de4_A* 4dfb_A* 4dfu_A* 4dt9_A* 4dt8_A* 4dtb_A* 3sgc_A 4dta_A* 3lzh_A | Back alignment and structure |
|---|
Probab=98.48 E-value=2.5e-07 Score=101.66 Aligned_cols=96 Identities=14% Similarity=0.161 Sum_probs=63.5
Q ss_pred CCCHHHHHHHHHHHhCCChhhcccccCccccccccccEEEEEEecCCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhh
Q 002031 96 PRPVQEVSQTIEREFGESMGGMFMDFVETPLATASIAQVHRATLVDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWA 175 (977)
Q Consensus 96 ~~~~~~v~~~l~~elg~~~~~~f~~~d~~piasaSigqV~~A~l~~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~ 175 (977)
.++.+.+++.+.+.+.. + .....++++.|....||+.. +.++||+.+++.. .
T Consensus 3 ~~~~~~l~~~l~~~~p~-~----~~~~i~~~~~G~~n~v~~v~----~~~vlR~~~~~~~---~---------------- 54 (304)
T 3sg8_A 3 TYTFDQVEKAIEQLYPD-F----TINTIEISGEGNDCIAYEIN----RDFIFKFPKHSRG---S---------------- 54 (304)
T ss_dssp CCCHHHHHHHHHHHCTT-C----CCCCCCEEEECSSEEEEEST----TSEEEEEESSHHH---H----------------
T ss_pred cCCHHHHHHHHHHhCCC-c----cceeeEecCCCCcceEEEEC----CEEEEEecCCcch---H----------------
Confidence 45677888888887743 1 11234679999999999874 5799998654300 0
Q ss_pred CCCCCCchhHHHHhhhcccccCcHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeeec---C----CceEEeec
Q 002031 176 EPQYDFNPIIDEWCKEAPKELDFNSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQS---S----ETVLILEF 248 (977)
Q Consensus 176 ~~~~~~~~~~~e~~~~l~~Eld~~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~~---~----~~vLVmE~ 248 (977)
-++.+|++.+..+.. ...+.||+++.. . ..++||||
T Consensus 55 --------------------~~~~~E~~~l~~l~~-----------------~~~v~vP~~~~~~~~~~~~~~~~~vm~~ 97 (304)
T 3sg8_A 55 --------------------TNLFNEVNILKRIHN-----------------KLPLPIPEVVFTGMPSETYQMSFAGFTK 97 (304)
T ss_dssp --------------------HHHHHHHHHHHHHTT-----------------SSSSCCCCEEEECCCCSSCSCSCEEEEC
T ss_pred --------------------HHHHHHHHHHHHHHh-----------------cCCCCCCceEeecCCCCCCCcceEEEcc
Confidence 023456666666543 124668888751 1 34789999
Q ss_pred cCCCCCCC
Q 002031 249 MDGIRLND 256 (977)
Q Consensus 249 i~G~~L~~ 256 (977)
++|.++.+
T Consensus 98 i~G~~l~~ 105 (304)
T 3sg8_A 98 IKGVPLTP 105 (304)
T ss_dssp CCCEECCH
T ss_pred cCCeECCc
Confidence 99999975
|
| >1tvf_A PBP4, penicillin binding protein 4; structural genomics, nysgxrc target, SAV0642, PSI, protein structure initiative; 2.00A {Staphylococcus aureus} SCOP: b.105.1.2 e.3.1.1 | Back alignment and structure |
|---|
Probab=98.47 E-value=6e-07 Score=100.84 Aligned_cols=119 Identities=14% Similarity=0.183 Sum_probs=78.1
Q ss_pred ecCeeEEEeeccccCCCCCCCCCCCCcceeecchHHHHHHHHHHHHHCCCcCcCCchhhhccccccCCCCCCcHHHHhcC
Q 002031 504 KDGEVIIDTSAGMLGRYDPRPVQPDSLFPVFSVTKGITAGMLHWLVDNGKLKLEENIANIWPEFKSNGKDLIKVHHVLNH 583 (977)
Q Consensus 504 ~~g~~v~~~~~G~~~~~~~~~~t~~T~f~i~SiTK~~ta~~v~~lv~~G~l~ld~~v~~ylP~~~~~~~~~iTir~LLsH 583 (977)
..|+++|++ +++..|++||+||.+|+++++..+++|+|+||++|. |+ +-..+
T Consensus 43 ~tG~vL~~~-------------n~d~~~~~AS~tKlmTa~~vl~~i~~G~l~Ld~~V~-------------vs--~~~~~ 94 (369)
T 1tvf_A 43 QTGQLLYQY-------------NIDTKWNPASMTKLMTMYLTLEAVNKGQLSLDDTVT-------------MT--NKEYI 94 (369)
T ss_dssp TTSBEEEEE-------------STTCCBCCGGGHHHHHHHHHHHHHHTTSSCTTCEEE-------------CC--HHHHH
T ss_pred CCCCEEEEE-------------CCCCeEccHHHHHHHHHHHHHHHHhcCCCCCCCeEE-------------EC--HHHHh
Confidence 678887753 567899999999999999999999999999999875 11 11112
Q ss_pred cCCCCCCcCCCCCCCCcCCCCHHHHHHHHHccCCCCCCCCceecccCcHHHHHHHHHHHHhC--CCHHHHHHHHcccccC
Q 002031 584 TSGLHNVSVDLSSENPLLICDWDECLNRIALSAPETEPGQEQLYHYLSFGWLCGGIIERASG--KKFQEILEEGIIQPLS 661 (977)
Q Consensus 584 tSGl~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~pG~~~~Ysn~~~~~llg~iiE~vtG--~~~~~~l~~~if~PLG 661 (977)
.+|.+...... ..+....+.++++..+.- +| .|. .+-.++|.+.| ..|-+.|.++ +.+||
T Consensus 95 ~~g~~~~S~~~--l~~g~~~tv~dLl~~~ii------------~S-~Nd--Aa~aLae~vgGs~~~Fv~~MN~~-a~~LG 156 (369)
T 1tvf_A 95 MSTLPELSNTK--LYPGQVWTIADLLQITVS------------NS-SNA--AALILAKKVSKNTSDFVDLMNNK-AKAIG 156 (369)
T ss_dssp HTTCTTSCCCC--CCTTCEEEHHHHHHHHHH------------SC-CHH--HHHHHHHHHSSSHHHHHHHHHHH-HHHTT
T ss_pred hcCCCCcceee--ccCCCeEeHHHHHHHHHh------------hC-cHH--HHHHHHHHhCCCHHHHHHHHHHH-HHHhC
Confidence 33333211100 111223566777766542 22 122 23455677777 4577888887 89999
Q ss_pred CCCccCC
Q 002031 662 IDGELYI 668 (977)
Q Consensus 662 m~~t~~~ 668 (977)
|++|.|.
T Consensus 157 m~~T~f~ 163 (369)
T 1tvf_A 157 MKNTHFV 163 (369)
T ss_dssp CTTCBCS
T ss_pred Ccccccc
Confidence 9999774
|
| >1w7f_A Beta-lactamase; hydrolase, isocitrate, bacillus licheniformis hydrolase; HET: ICT; 1.80A {Bacillus licheniformis} | Back alignment and structure |
|---|
Probab=98.45 E-value=1.6e-06 Score=95.65 Aligned_cols=100 Identities=17% Similarity=0.141 Sum_probs=62.8
Q ss_pred CCCCcceeecchHHHHHHHHHHHHHCCCcCcCCchhhhccccccCCCCCCcHHHHhcCcCCCCCCcCCCCCCCCcCCCCH
Q 002031 526 QPDSLFPVFSVTKGITAGMLHWLVDNGKLKLEENIANIWPEFKSNGKDLIKVHHVLNHTSGLHNVSVDLSSENPLLICDW 605 (977)
Q Consensus 526 t~~T~f~i~SiTK~~ta~~v~~lv~~G~l~ld~~v~~ylP~~~~~~~~~iTir~LLsHtSGl~~~~~~~~~~~~~~~~~~ 605 (977)
+++..|+.||++|.+|++++++.+++| +||++|.- +-.++..| +|+.... +....+.
T Consensus 77 n~~~~~~~aS~~K~~ta~~~l~~~~~G--~ld~~v~~-------------~~~~~~~~-s~~~~~~-------~~~~~tl 133 (307)
T 1w7f_A 77 RPDERFAFASTIKALTVGVLLQQKSIE--DLNQRITY-------------TRDDLVNY-NPITEKH-------VDTGMTL 133 (307)
T ss_dssp STTSCEECGGGHHHHHHHHHHHHCCTG--GGGCEECC-------------CTTTCCSC-CTTGGGC-------TTTCEEH
T ss_pred CCCCccccHHHHHHHHHHHHHHHhcCC--CCCceEEc-------------CHHHccCC-CcccccC-------CCCCcCH
Confidence 567889999999999999999999999 99988751 11222223 2332110 1123456
Q ss_pred HHHHHHHHccCCCCCCCCceecccCcHHHHHHHHHHHHhCCCHHHHHHHHcccccCCCCccC
Q 002031 606 DECLNRIALSAPETEPGQEQLYHYLSFGWLCGGIIERASGKKFQEILEEGIIQPLSIDGELY 667 (977)
Q Consensus 606 ~~~~~~l~~~~~~~~pG~~~~Ysn~~~~~llg~iiE~vtG~~~~~~l~~~if~PLGm~~t~~ 667 (977)
++++..+.. +|+ |. ....++|++.|. +-+++ .+++|||++|.+
T Consensus 134 ~~ll~~~i~------------~S~-N~--aa~~L~~~lgG~---~~~~~-~~~~lG~~~t~~ 176 (307)
T 1w7f_A 134 KELADASLR------------YSD-NT--AQNLILKQIGGP---ESLKK-ELRKIGDEVTNP 176 (307)
T ss_dssp HHHHHHHHH------------HCC-HH--HHHHHHHHTTHH---HHHHH-HHHHTTCCSCCC
T ss_pred HHHHHHHHH------------cCC-HH--HHHHHHHHhcCH---HHHHH-HHHHcCCCceee
Confidence 676665432 332 22 356778887762 33433 457899999854
|
| >3a3j_A PBP5; penicillin binding protein 5, DACA, hydrolase; 2.15A {Haemophilus influenzae} | Back alignment and structure |
|---|
Probab=98.41 E-value=6.8e-07 Score=99.63 Aligned_cols=123 Identities=14% Similarity=0.102 Sum_probs=77.6
Q ss_pred EEEEE--ecCeeEEEeeccccCCCCCCCCCCCCcceeecchHHHHHHHHHHHHHCCCcCcCCchhhhccccccCCCCCCc
Q 002031 499 QVCAY--KDGEVIIDTSAGMLGRYDPRPVQPDSLFPVFSVTKGITAGMLHWLVDNGKLKLEENIANIWPEFKSNGKDLIK 576 (977)
Q Consensus 499 svaVv--~~g~~v~~~~~G~~~~~~~~~~t~~T~f~i~SiTK~~ta~~v~~lv~~G~l~ld~~v~~ylP~~~~~~~~~iT 576 (977)
++.++ ..|+++|++ +++..|++||+||.+|+++++..+++|+|+||++|.-. + .. ..
T Consensus 11 ~a~l~D~~tG~vl~~~-------------n~d~~~~~AS~tKlmTa~~vl~~i~~G~l~ld~~v~vs--~---~a---~~ 69 (344)
T 3a3j_A 11 TYVLMDYNSGAILTAL-------------NPDQRQYPASLTKMMTSYVVGVALKQGKIHNTDMVTIG--E---SA---WG 69 (344)
T ss_dssp EEEEEETTTCCEEEEE-------------STTSCBCCGGGHHHHHHHHHHHHHHTTSSCTTCEEECC--T---TT---CG
T ss_pred EEEEEECCCCcEEEEE-------------CCCCeEccHHHHHHHHHHHHHHHHHcCCCCCCCEEEEC--H---HH---Hh
Confidence 34444 578887753 56788999999999999999999999999999988521 1 00 11
Q ss_pred HHHHhcCcCCCCCCcCCCCCCCCcCCCCHHHHHHHHHccCCCCCCCCceecccCcHHHHHHHHHHHHhC--CCHHHHHHH
Q 002031 577 VHHVLNHTSGLHNVSVDLSSENPLLICDWDECLNRIALSAPETEPGQEQLYHYLSFGWLCGGIIERASG--KKFQEILEE 654 (977)
Q Consensus 577 ir~LLsHtSGl~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~pG~~~~Ysn~~~~~llg~iiE~vtG--~~~~~~l~~ 654 (977)
. . .+|-.. ....+....+.++++..+. .+|. |- .+-.++|.+.| ..|-+.|.+
T Consensus 70 ~----~-~~~~s~-----~~l~~g~~~tv~dLl~~~l------------~~S~-Nd--Aa~aLae~vgGs~~~Fv~~Mn~ 124 (344)
T 3a3j_A 70 R----N-FPDSSK-----MFLDLNTQVSVADLNRGVI------------VVSG-ND--ATVALAEHISGNVPNFVETMNK 124 (344)
T ss_dssp G----G-CTTSCC-----CCCCTTCEEEHHHHHHHHH------------HHCC-HH--HHHHHHHHHHSSHHHHHHHHHH
T ss_pred c----c-cCCCce-----ecccCCCEEEHHHHHHHHH------------Hhch-HH--HHHHHHHHhcCCHHHHHHHHHH
Confidence 0 0 011000 0011112346667766554 2332 22 13346677777 568888988
Q ss_pred HcccccCCCCccCC
Q 002031 655 GIIQPLSIDGELYI 668 (977)
Q Consensus 655 ~if~PLGm~~t~~~ 668 (977)
+ ...|||++|.|.
T Consensus 125 ~-a~~LG~~~T~f~ 137 (344)
T 3a3j_A 125 Y-VQQFGLKNTNFT 137 (344)
T ss_dssp H-HHHTTCSSCBCS
T ss_pred H-HHHcCCCceEEe
Confidence 7 689999999773
|
| >3jr1_A Putative fructosamine-3-kinase; YP_719053.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 2.32A {Haemophilus somnus 129PT} | Back alignment and structure |
|---|
Probab=98.39 E-value=1.3e-06 Score=96.38 Aligned_cols=97 Identities=16% Similarity=0.288 Sum_probs=70.4
Q ss_pred CHHHHHHHHHHHhCCChhhcccccCccccccccccEEEEEEecCCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCC
Q 002031 98 PVQEVSQTIEREFGESMGGMFMDFVETPLATASIAQVHRATLVDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEP 177 (977)
Q Consensus 98 ~~~~v~~~l~~elg~~~~~~f~~~d~~piasaSigqV~~A~l~~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~ 177 (977)
.++.+.+.+.+.+|.+. .-.+.++++.|.+.++|+.+. +++.++||+..++-..
T Consensus 20 ~~~~l~~~L~~~lg~~~----~i~~~~~l~gG~~n~~y~v~~-~~~~~vlK~~~~~~~~--------------------- 73 (312)
T 3jr1_A 20 MWKSISQVLAEQFGAYY----FIKHKEKLYSGEMNEIWLIND-EVQTVFVKINERSYRS--------------------- 73 (312)
T ss_dssp HHHHHHHHHHHHHSSCC----CCCEEEEECCSSSSEEEEEES-SSCEEEEEEEEGGGHH---------------------
T ss_pred cHHHHHHHHHHHhCCCc----ceeeeEEeCCccceeeeEEEE-CCCeEEEEeCCcccHH---------------------
Confidence 45678888888888641 222347899999999999986 6789999987653211
Q ss_pred CCCCchhHHHHhhhcccccCcHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeee----cCCceEEeeccCCCC
Q 002031 178 QYDFNPIIDEWCKEAPKELDFNSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ----SSETVLILEFMDGIR 253 (977)
Q Consensus 178 ~~~~~~~~~e~~~~l~~Eld~~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~----~~~~vLVmE~i~G~~ 253 (977)
.|..|++.++.++.. ..+.||+|+. .+..++||||++|.+
T Consensus 74 -------------------~~~~E~~~L~~L~~~-----------------~~v~VP~vl~~~~~~g~~~lvme~l~G~~ 117 (312)
T 3jr1_A 74 -------------------MFRAEADQLALLAKT-----------------NSINVPLVYGIGNSQGHSFLLLEALNKSK 117 (312)
T ss_dssp -------------------HHHHHHHHHHHHHHT-----------------TSSBCCCEEEEEECSSEEEEEEECCCCCC
T ss_pred -------------------HHHHHHHHHHHHHhh-----------------CCCCcceEEEEeecCCceEEEEEeccCCC
Confidence 245677777777652 1478999885 245799999999998
Q ss_pred CCC
Q 002031 254 LND 256 (977)
Q Consensus 254 L~~ 256 (977)
+..
T Consensus 118 ~~~ 120 (312)
T 3jr1_A 118 NKQ 120 (312)
T ss_dssp CCT
T ss_pred CCc
Confidence 753
|
| >2olc_A MTR kinase, methylthioribose kinase; kinase ADP-2HO complex, transferase; HET: CPS ADP; 2.00A {Bacillus subtilis} SCOP: d.144.1.6 PDB: 2pu8_A* 2pui_A* 2pul_A* 2pun_A* 2pup_A* | Back alignment and structure |
|---|
Probab=98.39 E-value=1.8e-06 Score=98.48 Aligned_cols=58 Identities=7% Similarity=-0.016 Sum_probs=37.5
Q ss_pred CCCCCHHHHHHHHHHHhCCChhhcccccCccccccccccEEEEEEec-CCCEEEEEEecCCh
Q 002031 94 LPPRPVQEVSQTIEREFGESMGGMFMDFVETPLATASIAQVHRATLV-DGRQVVVKVQHQGI 154 (977)
Q Consensus 94 ~p~~~~~~v~~~l~~elg~~~~~~f~~~d~~piasaSigqV~~A~l~-~G~~VAVKv~~p~i 154 (977)
.-+++.+.+...+. .+|.-... ..++.+++|.|+.++||+++.. +|+.|+||...|..
T Consensus 9 ~~~l~~~~v~~~l~-~~~~~~~~--~~~~~~~lg~G~~n~vyrv~~~~~~~~~vvK~~~~~~ 67 (397)
T 2olc_A 9 YETLNESSAVALAV-KLGLFPSK--STLTCQEIGDGNLNYVFHIYDQEHDRALIIKQAVPYA 67 (397)
T ss_dssp CCCCCHHHHHHHHH-HTTC-------CCEEEECCSSSSEEEEEEEC----CEEEEEEECCC-
T ss_pred cccCCHHHHHHHHH-hcCcCCCC--CceEEEECCCCceEEEEEEEECCCCcEEEEEecchhh
Confidence 34566777777776 55421111 1245678999999999999864 57899999887754
|
| >3tdw_A Gentamicin resistance protein; kinase, phosphoryl transfer, antibiotic resistance, transfer; HET: GDP; 1.70A {Enterococcus gallinarum} PDB: 3tdv_A* | Back alignment and structure |
|---|
Probab=98.29 E-value=8.6e-07 Score=97.66 Aligned_cols=37 Identities=22% Similarity=0.365 Sum_probs=28.6
Q ss_pred cCccccCCCCCCeEEccC-CCCce-EEEecccccccCHH
Q 002031 285 DGFFNGDPHPGNFLVSKD-PPHRP-ILLDFGLTKKLSSS 321 (977)
Q Consensus 285 ~G~~H~D~hPgNIlv~~~-~~g~i-~LiDFG~~~~l~~~ 321 (977)
..++|+|+||+||+++.+ .++++ .||||+.+..-++.
T Consensus 190 ~~~~HgD~~~~N~l~~~~~~~~~~~~~iD~~~a~~gd~~ 228 (306)
T 3tdw_A 190 PRLIHGDLSPDHFLTNLNSRQTPLTGIIDFGDAAISDPD 228 (306)
T ss_dssp CEEECSCCSGGGEEECTTCSSCCEEEECCCTTCEEECGG
T ss_pred CeeEeCCCCcccEEEecCCCCCceEEEEehhhcCCCCHH
Confidence 478999999999999851 12565 79999988766553
|
| >3dw0_A Class A carbapenemase KPC-2; beta-lactamase, antibiotic resistance, hydrolase; 1.60A {Escherichia coli} | Back alignment and structure |
|---|
Probab=98.25 E-value=1.9e-05 Score=86.28 Aligned_cols=36 Identities=22% Similarity=0.230 Sum_probs=33.6
Q ss_pred CCCCcceeecchHHHHHHHHHHHHHCCCcCcCCchh
Q 002031 526 QPDSLFPVFSVTKGITAGMLHWLVDNGKLKLEENIA 561 (977)
Q Consensus 526 t~~T~f~i~SiTK~~ta~~v~~lv~~G~l~ld~~v~ 561 (977)
+++..|+.||++|.+++.+++..+++|+++||++|.
T Consensus 60 n~d~~~~~AS~~Kl~~a~~~l~~v~~G~l~ld~~v~ 95 (294)
T 3dw0_A 60 RAEERFPLCSSFKGFLAAAVLARSQQQAGLLDTPIR 95 (294)
T ss_dssp STTSCEECGGGHHHHHHHHHHHHHTTSTTCTTCEEC
T ss_pred CCCCcccchHHHHHHHHHHHHHHHhcCCCCCcceEe
Confidence 568889999999999999999999999999999874
|
| >2q83_A YTAA protein; 2635576, structural genomics, joint center for structu genomics, JCSG, protein structure initiative, PSI-2, transf; HET: ADN CIT UNL; 2.50A {Bacillus subtilis} | Back alignment and structure |
|---|
Probab=98.22 E-value=4.2e-06 Score=92.88 Aligned_cols=35 Identities=14% Similarity=0.163 Sum_probs=29.2
Q ss_pred hcCccccCCCCCCeEEccCCCCceEEEecccccccCH
Q 002031 284 VDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 320 (977)
Q Consensus 284 ~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 320 (977)
..+++|+|+||+|||++.+ +.+.||||+.++.-++
T Consensus 221 ~~~l~HgD~~~~Nil~~~~--~~~~lIDfe~a~~g~~ 255 (346)
T 2q83_A 221 SPNLCHQDYGTGNTLLGEN--EQIWVIDLDTVSFDLP 255 (346)
T ss_dssp SCCEECSSCSTTSEEECGG--GCEEECCCTTCEECCT
T ss_pred cCceecCCCCcccEEEeCC--CcEEEEehhhcccCCh
Confidence 4789999999999999754 6799999998865443
|
| >3ats_A Putative uncharacterized protein; hypothetical protein, putative aminoglycoside phosphortransf transferase; 1.67A {Mycobacterium tuberculosis} PDB: 3att_A* | Back alignment and structure |
|---|
Probab=98.22 E-value=1.3e-05 Score=90.00 Aligned_cols=104 Identities=15% Similarity=0.173 Sum_probs=65.9
Q ss_pred HHHHHHHHHHhCCChhhcccccCcccc-ccccccEEEEEEec-------CCCEEEEEEecCChhhhhHhhHHHHHHHHHH
Q 002031 100 QEVSQTIEREFGESMGGMFMDFVETPL-ATASIAQVHRATLV-------DGRQVVVKVQHQGIKTIILEDLKNAKSIVDW 171 (977)
Q Consensus 100 ~~v~~~l~~elg~~~~~~f~~~d~~pi-asaSigqV~~A~l~-------~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~ 171 (977)
+.+.+.|++.++.. .. ..-.+.+++ +.|....+|+.... +|+.+++|+..++....
T Consensus 4 ~~l~~~l~~~~~~~-~~-~~v~~~~~l~~~G~~n~~y~v~~~~~~~~~~~~~~~vlR~~~~~~~~~-------------- 67 (357)
T 3ats_A 4 AVISRWLSSVLPGG-AA-PEVTVESGVDSTGMSSETIILTARWQQDGRSIQQKLVARVAPAAEDVP-------------- 67 (357)
T ss_dssp HHHHHHHHHHSCTT-CC-CEEEEEEEECTTSSEEEEEEEEEEEEETTEEEEEEEEEEECCCGGGCC--------------
T ss_pred HHHHHHHHHhcCCc-CC-CceEEEEECCCCCccceEEEEEEecccCCCCCCceEEEEeCCCCCccc--------------
Confidence 34566677666531 11 001123678 89999999998764 27889999876542100
Q ss_pred HHhhCCCCCCchhHHHHhhhcccccCcHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeee-c------CCceE
Q 002031 172 IAWAEPQYDFNPIIDEWCKEAPKELDFNSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-S------SETVL 244 (977)
Q Consensus 172 ~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~------~~~vL 244 (977)
.....++.+|++.+..++... .+.||+++. + +..++
T Consensus 68 --------------------~~~~~~~~~E~~~l~~L~~~~-----------------~vpvP~v~~~~~~~~~~g~~~~ 110 (357)
T 3ats_A 68 --------------------VFPTYRLDHQFEVIRLVGELT-----------------DVPVPRVRWIETTGDVLGTPFF 110 (357)
T ss_dssp --------------------SSSCCCHHHHHHHHHHHHHHC-----------------CSCCCCEEEEECSSTTTSSCEE
T ss_pred --------------------cCchhHHHHHHHHHHHHhhcC-----------------CCCCCcEEEEccCCCccCCceE
Confidence 001135677888888877631 367898875 2 23589
Q ss_pred EeeccCCCCCCC
Q 002031 245 ILEFMDGIRLND 256 (977)
Q Consensus 245 VmE~i~G~~L~~ 256 (977)
||||++|.++.+
T Consensus 111 v~e~l~G~~l~~ 122 (357)
T 3ats_A 111 LMDYVEGVVPPD 122 (357)
T ss_dssp EEECCCCBCCCB
T ss_pred EEEecCCCChhh
Confidence 999999998764
|
| >4ewf_A Beta-lactamase; ABA-sandwich, structural genomics, midwest center for struct genomics (MCSG), PSI-biology, cytoplasmic, hydrolase; 2.00A {Sphaerobacter thermophilus} | Back alignment and structure |
|---|
Probab=98.16 E-value=3.7e-05 Score=83.15 Aligned_cols=36 Identities=25% Similarity=0.161 Sum_probs=33.6
Q ss_pred CCCCcceeecchHHHHHHHHHHHHHCCCcCcCCchh
Q 002031 526 QPDSLFPVFSVTKGITAGMLHWLVDNGKLKLEENIA 561 (977)
Q Consensus 526 t~~T~f~i~SiTK~~ta~~v~~lv~~G~l~ld~~v~ 561 (977)
+.|..|+.+|++|.+++++++..+++|+++||++|.
T Consensus 43 n~d~~~~~AS~~Kl~~~~~~l~~v~~G~l~l~~~v~ 78 (275)
T 4ewf_A 43 NGDRRFRAASTVKIPLMIAVYRAVDAGERALTDRIV 78 (275)
T ss_dssp STTCCEECGGGGHHHHHHHHHHHHHTTSCCTTCEEE
T ss_pred CCCCeEccHHHHHHHHHHHHHHHHhcCCCCchhhcc
Confidence 567889999999999999999999999999999984
|
| >4euz_A Carbapenem-hydrolizing beta-lactamase SFC-1; carbapenemase, hydrolase, antibiotic resistance, beta-lactam complex; HET: HAR MEM; 1.08A {Serratia fonticola} PDB: 4eqi_A 4ev4_A* | Back alignment and structure |
|---|
Probab=98.16 E-value=8.1e-05 Score=80.77 Aligned_cols=36 Identities=19% Similarity=0.245 Sum_probs=33.5
Q ss_pred CCCCcceeecchHHHHHHHHHHHHHCCCcCcCCchh
Q 002031 526 QPDSLFPVFSVTKGITAGMLHWLVDNGKLKLEENIA 561 (977)
Q Consensus 526 t~~T~f~i~SiTK~~ta~~v~~lv~~G~l~ld~~v~ 561 (977)
+++..|++||++|.+++.+++..+++|+++||++|.
T Consensus 39 n~d~~~~~AS~~Kl~~~~~vl~~v~~G~l~ld~~v~ 74 (283)
T 4euz_A 39 RANERFPLCASFKGFLAAAVLSKSQQQEGLLNQRIR 74 (283)
T ss_dssp STTSCEECGGGHHHHHHHHHHHHHHHSTTGGGCEEC
T ss_pred CCCCeEEcHHHHHHHHHHHHHHHhhCCCCCCCcEEE
Confidence 567899999999999999999999999999999873
|
| >2wuq_A BLAB, beta-lactamase regulatory protein BLAB; class A beta-lactamase fold, transcription regulation, beta-lactamase induction, transcription; 1.80A {Streptomyces cacaoi} | Back alignment and structure |
|---|
Probab=98.15 E-value=1.8e-05 Score=87.36 Aligned_cols=37 Identities=22% Similarity=0.141 Sum_probs=33.8
Q ss_pred CCCCcceeecchHHHHHHHHHHHHHCCCcCcCCchhh
Q 002031 526 QPDSLFPVFSVTKGITAGMLHWLVDNGKLKLEENIAN 562 (977)
Q Consensus 526 t~~T~f~i~SiTK~~ta~~v~~lv~~G~l~ld~~v~~ 562 (977)
+++..|+.||++|.+|+++++..+++|++++|++|..
T Consensus 38 ~~~~~~~pgSt~K~~~a~aal~~~~~G~~~~~~~v~~ 74 (318)
T 2wuq_A 38 DPDTELPTASLVKLPLALATLERIRLGEVDGAQQIEV 74 (318)
T ss_dssp STTCCEECGGGGHHHHHHHHHHHHHTTSSCTTCEEEE
T ss_pred CCCCccccHHHHHHHHHHHHHHHHhCCCCCCCCeEEe
Confidence 3467899999999999999999999999999999864
|
| >1ghp_A Beta-lactamase, penicillinase; hydrolase, antibiotic resistance, beta-lactam hydrolysis, benzylpenicillin, cephaloridine; HET: PNM; 1.76A {Staphylococcus aureus} SCOP: e.3.1.1 PDB: 1ghi_A* 1ghm_A* 1kgf_A 1kge_A 1ome_A 1kgg_A 1dja_A 3blm_A 1blh_A* 1blc_A 1djc_A 1djb_A 1blp_A 1pio_A | Back alignment and structure |
|---|
Probab=98.13 E-value=2.1e-05 Score=84.16 Aligned_cols=100 Identities=15% Similarity=0.092 Sum_probs=62.2
Q ss_pred CCCCcceeecchHHHHHHHHHHHHHCCCcCcCCchhhhccccccCCCCCCcHHHHhcCcCCCCCCcCCCCCCCCcCCCCH
Q 002031 526 QPDSLFPVFSVTKGITAGMLHWLVDNGKLKLEENIANIWPEFKSNGKDLIKVHHVLNHTSGLHNVSVDLSSENPLLICDW 605 (977)
Q Consensus 526 t~~T~f~i~SiTK~~ta~~v~~lv~~G~l~ld~~v~~ylP~~~~~~~~~iTir~LLsHtSGl~~~~~~~~~~~~~~~~~~ 605 (977)
+++..|+.||++|.+|+++++..+++|+ ||++|.- +-.++..+ +|+.... .....+.
T Consensus 31 ~~~~~~~~aS~~K~~~a~~~l~~~~~g~--ld~~v~~-------------~~~~~~~~-s~i~~~~-------~~~~~tl 87 (258)
T 1ghp_A 31 NSDKRFAYASTSKAINSAILLEQVPYNK--LNKKVHI-------------NKDDIVAY-SPILEKY-------VGKDITL 87 (258)
T ss_dssp STTSCEECGGGHHHHHHHHHHHHSCGGG--GGCEEEE-------------CGGGCCSS-CTTGGGG-------TTEEEEH
T ss_pred CCCCcccchHHHHHHHHHHHHHHhccCC--CCCcEEe-------------CHHHccCC-Ccchhhc-------CCCCcCH
Confidence 5578899999999999999999999999 8887641 11222221 2332211 0113456
Q ss_pred HHHHHHHHccCCCCCCCCceecccCcHHHHHHHHHHHHhCCCHHHHHHHHcccccCCCCccC
Q 002031 606 DECLNRIALSAPETEPGQEQLYHYLSFGWLCGGIIERASGKKFQEILEEGIIQPLSIDGELY 667 (977)
Q Consensus 606 ~~~~~~l~~~~~~~~pG~~~~Ysn~~~~~llg~iiE~vtG~~~~~~l~~~if~PLGm~~t~~ 667 (977)
++++..+.. +|+ |. ....+++++.|. +-+++ .+..|||++|.+
T Consensus 88 ~~l~~~~i~------------~S~-N~--aa~~L~~~~gG~---~~~~~-~~~~lG~~~t~~ 130 (258)
T 1ghp_A 88 KALIEASMT------------YSD-NT--ANNKIIKEIGGI---KKVKQ-RLKELGDKVTNP 130 (258)
T ss_dssp HHHHHHHHH------------HCC-HH--HHHHHHHHHTCH---HHHHH-HHHHTTCCSCBC
T ss_pred HHHHHHHHH------------hcc-HH--HHHHHHHHhCCH---HHHHH-HHHHcCCCceec
Confidence 676665442 332 22 355677888773 33443 467899999855
|
| >3p09_A Beta-lactamase; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta sandwich, cytosol; HET: MSE; 1.90A {Francisella tularensis subsp} | Back alignment and structure |
|---|
Probab=98.12 E-value=6e-05 Score=82.09 Aligned_cols=36 Identities=22% Similarity=0.195 Sum_probs=33.7
Q ss_pred CCCCcceeecchHHHHHHHHHHHHHCCCcCcCCchh
Q 002031 526 QPDSLFPVFSVTKGITAGMLHWLVDNGKLKLEENIA 561 (977)
Q Consensus 526 t~~T~f~i~SiTK~~ta~~v~~lv~~G~l~ld~~v~ 561 (977)
+++..|++||++|.+++.+++..+++|+++||++|.
T Consensus 55 n~d~~~~~AS~~Kl~~~~~vl~~v~~G~l~ld~~v~ 90 (290)
T 3p09_A 55 NESYHFPICSVFKFLLVGAILDYDMHNQGFLDKKIP 90 (290)
T ss_dssp STTSCEECGGGHHHHHHHHHHHHHHHSTTGGGCEEE
T ss_pred CCCCeEecHHHHHHHHHHHHHHHhhcCCCCCcceEE
Confidence 668889999999999999999999999999999874
|
| >1es5_A DD-transpeptidase; penicillin-binding, serine peptidase, BET lactamase, hydrolase carboxypeptidase, hydrolase; 1.40A {Streptomyces SP} SCOP: e.3.1.1 PDB: 1skf_A 1es2_A 1j9m_A 1esi_A 1es3_A 1es4_A | Back alignment and structure |
|---|
Probab=98.08 E-value=1.1e-05 Score=86.68 Aligned_cols=51 Identities=22% Similarity=0.239 Sum_probs=40.5
Q ss_pred ccceEEEEE--ecCeeEEEeeccccCCCCCCCCCCCCcceeecchHHHHHHHHHHHHHCCCcCcCCchh
Q 002031 495 ILGIQVCAY--KDGEVIIDTSAGMLGRYDPRPVQPDSLFPVFSVTKGITAGMLHWLVDNGKLKLEENIA 561 (977)
Q Consensus 495 ~pG~svaVv--~~g~~v~~~~~G~~~~~~~~~~t~~T~f~i~SiTK~~ta~~v~~lv~~G~l~ld~~v~ 561 (977)
+.+-++.|+ ..|++++.+ ++++.|++||+||.+|+++++ ++|+++||++|.
T Consensus 6 ~~a~~~~v~d~~tG~vl~~~-------------n~~~~~~~AS~tKlmta~~~l---~~g~l~l~~~v~ 58 (262)
T 1es5_A 6 IAAVGGYAMNNGTGTTLYTK-------------AADTRRSTGSTTKIMTAKVVL---AQSNLNLDAKVT 58 (262)
T ss_dssp CSCSEEEEEETTTCCEEEEE-------------STTCCBCCGGGGHHHHHHHHH---TCTTCCTTCEEE
T ss_pred cceeEEEEEECCCCCEEEEE-------------CCCCcCCcHHHHHHHHHHHHH---HcCCCCCCCeEE
Confidence 334455555 578887752 468899999999999999987 899999999876
|
| >2ppq_A HSK, HK, homoserine kinase; structural genomics, MCSG, PSI-2, protein structure initiative; 2.00A {Agrobacterium tumefaciens str} SCOP: d.144.1.6 | Back alignment and structure |
|---|
Probab=98.01 E-value=1.6e-05 Score=87.70 Aligned_cols=52 Identities=6% Similarity=0.082 Sum_probs=34.2
Q ss_pred CCCCHHHHHHHHHHHhCCChhhcccccCccccccccccEEEEEEecCCCEEEEEEecCC
Q 002031 95 PPRPVQEVSQTIEREFGESMGGMFMDFVETPLATASIAQVHRATLVDGRQVVVKVQHQG 153 (977)
Q Consensus 95 p~~~~~~v~~~l~~elg~~~~~~f~~~d~~piasaSigqV~~A~l~~G~~VAVKv~~p~ 153 (977)
++++.+++..++++ +|- .++ .+-++++.|...+||+....+| .+++|+.++.
T Consensus 5 ~~~~~~~l~~~l~~-~~~--~~~---~~~~~i~~G~~n~~~~v~~~~g-~~vlk~~~~~ 56 (322)
T 2ppq_A 5 TDITEDELRNFLTQ-YDV--GSL---TSYKGIAEGVENSNFLLHTTKD-PLILTLYEKR 56 (322)
T ss_dssp CCCCHHHHHHHHTT-BCC--CCE---EEEEEECC---EEEEEEEESSC-CEEEEEECC-
T ss_pred ccCCHHHHHHHHHh-CCC--Ccc---eEeeccCCCcccceEEEEeCCc-cEEEEEeCCC
Confidence 56777888888765 653 121 2346888999999999987655 6889988763
|
| >4hes_A Beta-lactamase class A-like protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, COG COG2367, H; HET: MSE; 1.90A {Veillonella parvula} | Back alignment and structure |
|---|
Probab=97.96 E-value=4.1e-05 Score=82.78 Aligned_cols=71 Identities=18% Similarity=0.318 Sum_probs=49.6
Q ss_pred hHHHHHHHHHHHhccCCCccceEEEEEecCe---eEEEeeccccCCCCCCCCCCCCcceeecchHHHHHHHHHHHHHCCC
Q 002031 477 DVEAKLRDFLVELGNDGKILGIQVCAYKDGE---VIIDTSAGMLGRYDPRPVQPDSLFPVFSVTKGITAGMLHWLVDNGK 553 (977)
Q Consensus 477 ~~~~~l~~~l~~~~~~~~~pG~svaVv~~g~---~v~~~~~G~~~~~~~~~~t~~T~f~i~SiTK~~ta~~v~~lv~~G~ 553 (977)
.++..++..+++....+ --++.+..+.+++ +++. .++|+.|+.||++|.+++.+++..+++|+
T Consensus 12 ~l~~~l~~~~~~~~~~~-~~~~~v~~l~d~~~~~vl~~-------------~n~d~~~~~AS~~Kl~~~~~~~~~v~~G~ 77 (275)
T 4hes_A 12 SLEHQLDTVIKELAPAG-NISYAVLQFDDEEEPTLIAA-------------RGENTVHSSASLIKVLIMEYVFHLARTEQ 77 (275)
T ss_dssp HHHHHHHHHHHHHCTTS-EEEEEEEEECTTSCCEEEEE-------------ESTTCCEECGGGGHHHHHHHHHHHHHTTS
T ss_pred hHHHHHHHHHHhcccCC-ceEEEEEEEEcCCCceEEEE-------------ECCCceecchHHHHHHHHHHHHHHHHcCC
Confidence 44556666666654322 2233333344544 3332 16788999999999999999999999999
Q ss_pred cCcCCchh
Q 002031 554 LKLEENIA 561 (977)
Q Consensus 554 l~ld~~v~ 561 (977)
|+||++|.
T Consensus 78 l~l~~~v~ 85 (275)
T 4hes_A 78 LDINDTVP 85 (275)
T ss_dssp SCTTCEEE
T ss_pred CCccceEE
Confidence 99999875
|
| >1xp4_A D-alanyl-D-alanine carboxypeptidase; five-stranded antiparallel beta-sheet, omega-like loop, hydrolase; 2.80A {Streptococcus pneumoniae R6} SCOP: b.105.1.1 e.3.1.1 | Back alignment and structure |
|---|
Probab=97.94 E-value=3.4e-05 Score=86.98 Aligned_cols=114 Identities=15% Similarity=0.187 Sum_probs=74.6
Q ss_pred ecCeeEEEeeccccCCCCCCCCCCCCcceeecchHHHHHHHHHHHHHCCCcCcCCchhhhccccccCCCCCCcHHHHhc-
Q 002031 504 KDGEVIIDTSAGMLGRYDPRPVQPDSLFPVFSVTKGITAGMLHWLVDNGKLKLEENIANIWPEFKSNGKDLIKVHHVLN- 582 (977)
Q Consensus 504 ~~g~~v~~~~~G~~~~~~~~~~t~~T~f~i~SiTK~~ta~~v~~lv~~G~l~ld~~v~~ylP~~~~~~~~~iTir~LLs- 582 (977)
..|+++|++ +++..|++||+||.+|+++++..+++|+|+||++|.- +-.+...
T Consensus 23 ~tG~vl~~~-------------n~d~~~~~AS~tKlmta~~vl~~i~~G~l~ld~~V~v-------------s~~~~~~~ 76 (379)
T 1xp4_A 23 NTGKILYEK-------------DATQPVEIASITKLITVYLVYEALENGSITLSTPVDI-------------SDYPYQLT 76 (379)
T ss_dssp TTTEEEEEE-------------SCSSCEECGGGGHHHHHHHHHHHHHHTSSCTTCEEEC-------------CHHHHHTT
T ss_pred CCCcEEEEE-------------CCCCcCCchHHHHHHHHHHHHHHHHcCCCCCCCEEEE-------------cHHHHhhc
Confidence 578888753 5678999999999999999999999999999998751 1111110
Q ss_pred ---CcCCCCCCcCCCCCCCCcCCCCHHHHHHHHHccCCCCCCCCceecccCcHHHHHHHHHHHHhC--CCHHHHHHHHcc
Q 002031 583 ---HTSGLHNVSVDLSSENPLLICDWDECLNRIALSAPETEPGQEQLYHYLSFGWLCGGIIERASG--KKFQEILEEGII 657 (977)
Q Consensus 583 ---HtSGl~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~pG~~~~Ysn~~~~~llg~iiE~vtG--~~~~~~l~~~if 657 (977)
--|.+. .. ....+.++++..+.- +| .|- ..-.++|.+.| ..|-+.|.++.
T Consensus 77 ~~~~~S~~~--------l~-g~~~tv~dLl~~~ii------------~S-~Nd--Aa~aLae~vgGs~~~Fv~~MN~~a- 131 (379)
T 1xp4_A 77 TNSEASNIP--------ME-ARNYTVEELLEATLV------------SS-ANS--AAIALAEKIAGSEKDFVDMMRAKL- 131 (379)
T ss_dssp TSCCSSCCC--------CT-TCEEEHHHHHHHHHH------------HC-CHH--HHHHHHHHHHSSHHHHHHHHHHHH-
T ss_pred cCCCCceee--------EC-CcEEEHHHHHHHHHh------------cC-ccH--HHHHHHHHcCCCHHHHHHHHHHHH-
Confidence 011111 00 123466677766532 22 122 23345566777 45778888875
Q ss_pred cccCCCCccCC
Q 002031 658 QPLSIDGELYI 668 (977)
Q Consensus 658 ~PLGm~~t~~~ 668 (977)
..|||++|.|.
T Consensus 132 ~~LG~~~T~f~ 142 (379)
T 1xp4_A 132 LEWGIQDATVV 142 (379)
T ss_dssp HHTTCCSCBCC
T ss_pred HHcCCceEEee
Confidence 89999999774
|
| >3i1a_A Spectinomycin phosphotransferase; protein kinase, aminoglycoside phosphotransferase, antibiotic resistance; HET: MES PG4; 1.70A {Legionella pneumophila} PDB: 3i0q_A* 3i0o_A* 3q2m_A* | Back alignment and structure |
|---|
Probab=97.93 E-value=4.1e-05 Score=85.48 Aligned_cols=54 Identities=11% Similarity=0.051 Sum_probs=41.8
Q ss_pred CCCCHHHHHHHHHHHhCCChhhcccccCccccccccccEEEEEEecCCCEEEEEEecCC
Q 002031 95 PPRPVQEVSQTIEREFGESMGGMFMDFVETPLATASIAQVHRATLVDGRQVVVKVQHQG 153 (977)
Q Consensus 95 p~~~~~~v~~~l~~elg~~~~~~f~~~d~~piasaSigqV~~A~l~~G~~VAVKv~~p~ 153 (977)
|+++.+.+.+.+.+.+|-... .+...+.|.|+...||+....+| .+++|+.++.
T Consensus 4 p~l~~~~l~~~l~~~ygl~~~----~~~~l~~G~g~~N~vy~v~~~~g-~~vLK~~~~~ 57 (339)
T 3i1a_A 4 QPIQAQQLIELLKVHYGIDIH----TAQFIQGGADTNAFAYQADSESK-SYFIKLKYGY 57 (339)
T ss_dssp CSSCTTHHHHHHHHHHCCCCS----EEEEETTTSCSSCEEEEEECSSC-EEEEEEEECS
T ss_pred CCCCHHHHHHHHHHHcCCCcc----eeEEeeccCccccceEEEEeCCC-CEEEEEecCc
Confidence 677888899999999987543 33445667777999999987777 9999987764
|
| >1zyl_A Hypothetical protein YIHE; putative protein kinase, structural genomics, PSI, protein structure initiative; 2.80A {Escherichia coli} SCOP: d.144.1.6 | Back alignment and structure |
|---|
Probab=97.91 E-value=4.3e-05 Score=84.44 Aligned_cols=53 Identities=21% Similarity=0.176 Sum_probs=38.8
Q ss_pred CCCCCHHHHHHHHHHHhCCChhhcccccCccccccccccEEEEEEecCCCEEEEEEecCC
Q 002031 94 LPPRPVQEVSQTIEREFGESMGGMFMDFVETPLATASIAQVHRATLVDGRQVVVKVQHQG 153 (977)
Q Consensus 94 ~p~~~~~~v~~~l~~elg~~~~~~f~~~d~~piasaSigqV~~A~l~~G~~VAVKv~~p~ 153 (977)
.+..+.+.+...+ +.+|-.... ..++++ |....||+....+|+.+++|+.+|+
T Consensus 8 ~~~l~~~~i~~~l-~~~g~~~~~-----~~~~l~-g~~n~~y~v~~~~g~~~vlK~~~~~ 60 (328)
T 1zyl_A 8 FQTLHPDTIMDAL-FEHGIRVDS-----GLTPLN-SYENRVYQFQDEDRRRFVVKFYRPE 60 (328)
T ss_dssp CCCCCHHHHHHHH-HHTTCCCCS-----CCEEEC-CSSSEEEEECCTTCCCEEEEEECTT
T ss_pred CCCCCHHHHHHHH-HHcCCCCCc-----eEEeec-CcccceEEEEcCCCCEEEEEEcCCC
Confidence 4566778888888 466644321 225677 8889999988777889999998875
|
| >3csv_A Aminoglycoside phosphotransferase; YP_614837.1, phosphotransferase enzyme family, structural genomics, JOIN for structural genomics, JCSG; HET: MSE; 2.15A {Silicibacter SP} | Back alignment and structure |
|---|
Probab=97.86 E-value=5e-05 Score=84.28 Aligned_cols=36 Identities=25% Similarity=0.159 Sum_probs=29.0
Q ss_pred cCccccCCCCCCeEEccCC--CCceEEEecccccccCH
Q 002031 285 DGFFNGDPHPGNFLVSKDP--PHRPILLDFGLTKKLSS 320 (977)
Q Consensus 285 ~G~~H~D~hPgNIlv~~~~--~g~i~LiDFG~~~~l~~ 320 (977)
.+++|+|+||+|||++.+. .+.+.||||+.+..=+.
T Consensus 183 ~~lvHgD~~~~Nil~~~~~~~~~~~~lIDf~~a~~G~~ 220 (333)
T 3csv_A 183 MVFVHRDFHAQNLLWLPEREGLARVGVIDFQDAKLGHR 220 (333)
T ss_dssp CEEECSCCSGGGEEECTTSCGGGGEEECCCTTCEEECT
T ss_pred CeeEeCCcCcccEEeccCcCCCCCeEEEeCCCcCcCCC
Confidence 5899999999999997531 15789999999876554
|
| >3dxq_A Choline/ethanolamine kinase family protein; NP_106042.1, STR genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE; 2.55A {Mesorhizobium loti} | Back alignment and structure |
|---|
Probab=97.83 E-value=3.2e-05 Score=84.56 Aligned_cols=72 Identities=17% Similarity=0.280 Sum_probs=51.2
Q ss_pred ccccccccccEEEEEEecCCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCcHHHH
Q 002031 123 ETPLATASIAQVHRATLVDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (977)
Q Consensus 123 ~~piasaSigqV~~A~l~~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea 202 (977)
-+|++.|...++|+. +.++||+..++... -+|..+|+
T Consensus 23 i~~l~gG~tN~~~~~-----~~~vlR~~~~~~~~--------------------------------------~~~r~~E~ 59 (301)
T 3dxq_A 23 PLERLGGLTNLVFRA-----GDLCLRIPGKGTEE--------------------------------------YINRANEA 59 (301)
T ss_dssp CEEEESCSSEEEEEE-----TTEEEEEECC------------------------------------------CCCHHHHH
T ss_pred eeEcCCcccccccee-----eeEEEECCCCCccc--------------------------------------eeCHHHHH
Confidence 478999999999998 67999988765321 12455688
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeee--cCCceEEeecc-CCCCCCC
Q 002031 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ--SSETVLILEFM-DGIRLND 256 (977)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~--~~~~vLVmE~i-~G~~L~~ 256 (977)
+.+..+... ++. |+++. ....+++|||+ +|.++..
T Consensus 60 ~~l~~l~~~------------------g~~-P~~~~~~~~~~~~v~e~i~~g~~l~~ 97 (301)
T 3dxq_A 60 VAAREAAKA------------------GVS-PEVLHVDPATGVMVTRYIAGAQTMSP 97 (301)
T ss_dssp HHHHHHHHT------------------TSS-CCEEEECTTTCCEEEECCTTCEECCH
T ss_pred HHHHHHHHc------------------CCC-CceEEEECCCCEEEEeecCCCccCCH
Confidence 888777652 233 77776 34479999999 9988864
|
| >3c5i_A Choline kinase; choline, kinase, malaria, transferase, structural genomics, structural genomics consortium; 2.20A {Plasmodium knowlesi} PDB: 3fi8_A* | Back alignment and structure |
|---|
Probab=97.83 E-value=5.5e-05 Score=85.31 Aligned_cols=99 Identities=12% Similarity=0.145 Sum_probs=60.1
Q ss_pred HHHHHHHHHHHhCCChhhcc-cccCccccccccccEEEEEEecC---------CCEEEEEEecCChhhhhHhhHHHHHHH
Q 002031 99 VQEVSQTIEREFGESMGGMF-MDFVETPLATASIAQVHRATLVD---------GRQVVVKVQHQGIKTIILEDLKNAKSI 168 (977)
Q Consensus 99 ~~~v~~~l~~elg~~~~~~f-~~~d~~piasaSigqV~~A~l~~---------G~~VAVKv~~p~i~~~~~~Dl~~l~~l 168 (977)
.+.++.++.+.+. .|..+- ..++-++++.|....+|+....+ ++.+++|+-.++....
T Consensus 14 ~~~~~~l~~~~~~-~w~~~~~~~~~~~~l~~G~~N~~y~v~~~~~~~~~~~~~~~~~vlRi~~~~~~~~----------- 81 (369)
T 3c5i_A 14 PLYIKKICLEKVP-EWNHFTEDNLRVKQILSGLTNQLFEVGLKEETANNYNSIRTRVLFRIYGKHVDEL----------- 81 (369)
T ss_dssp HHHHHHHHHHHCG-GGTTCCGGGEEEEEC----CCEEEEEEECHHHHTTCTTSCCEEEEEECCTTGGGT-----------
T ss_pred HHHHHHHHHHHCC-CCCCCCcCceEEEEeCCcccceEEEEEeCCCCcccccCCCceEEEEecCCCccce-----------
Confidence 3455555554432 233221 23455789999999999998754 3799999876643211
Q ss_pred HHHHHhhCCCCCCchhHHHHhhhcccccCcHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeeecCCceEEeec
Q 002031 169 VDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQSSETVLILEF 248 (977)
Q Consensus 169 ~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~~~~~vLVmE~ 248 (977)
+|...|.+.+..+... .+ +|+++.....+++|||
T Consensus 82 ---------------------------~~~~~E~~~l~~L~~~------------------g~-~P~~~~~~~~~~v~e~ 115 (369)
T 3c5i_A 82 ---------------------------YNTISEFEVYKTMSKY------------------KI-APQLLNTFNGGRIEEW 115 (369)
T ss_dssp ---------------------------SCHHHHHHHHHHHHHT------------------TS-SCCEEEEETTEEEEEC
T ss_pred ---------------------------ecHHHHHHHHHHHHhc------------------CC-CCceEEecCCcEEEEE
Confidence 1345677777777641 24 7887764457899999
Q ss_pred cCCCCCC
Q 002031 249 MDGIRLN 255 (977)
Q Consensus 249 i~G~~L~ 255 (977)
++|.++.
T Consensus 116 i~G~~l~ 122 (369)
T 3c5i_A 116 LYGDPLR 122 (369)
T ss_dssp CCSEECC
T ss_pred ecCCcCC
Confidence 9998764
|
| >2pyw_A Uncharacterized protein; 5-methylthioribose kinase, plant methionine recycling, refol transferase; HET: SR1 ADP; 1.90A {Arabidopsis thaliana} | Back alignment and structure |
|---|
Probab=97.76 E-value=6.4e-05 Score=86.43 Aligned_cols=36 Identities=19% Similarity=0.369 Sum_probs=30.2
Q ss_pred hcCccccCCCCCCeEEccCCCCceEEEecccccccCHHH
Q 002031 284 VDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSSSM 322 (977)
Q Consensus 284 ~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~~~ 322 (977)
..+++|+|+||+|||++.+ + ++||||+.+..=++..
T Consensus 231 ~~~liHGDl~~~Nil~~~~--~-~~lID~e~a~~G~p~~ 266 (420)
T 2pyw_A 231 AQALIHGDLHTGSVMVTQD--S-TQVIDPEFSFYGPMGF 266 (420)
T ss_dssp CCEEECSCCSGGGEEECSS--C-EEECCCTTCEEECHHH
T ss_pred CCeEEecCCCCCcEEEeCC--C-CEEEeCcccccCchHH
Confidence 5789999999999999854 4 9999999988776543
|
| >3ita_A D-alanyl-D-alanine carboxypeptidase DACC; ppenicillin-binding protein, BP6, DD-carboxypeptidase, peptidoglycan, ampicillin, acyl-enzyme complex; HET: AIX AIC; 1.80A {Escherichia coli} PDB: 3it9_A* 3itb_A* | Back alignment and structure |
|---|
Probab=97.72 E-value=0.00014 Score=80.73 Aligned_cols=54 Identities=19% Similarity=0.203 Sum_probs=43.2
Q ss_pred ccceEEEEE--ecCeeEEEeeccccCCCCCCCCCCCCcceeecchHHHHHHHHHHHHHCCCcCcCCchh
Q 002031 495 ILGIQVCAY--KDGEVIIDTSAGMLGRYDPRPVQPDSLFPVFSVTKGITAGMLHWLVDNGKLKLEENIA 561 (977)
Q Consensus 495 ~pG~svaVv--~~g~~v~~~~~G~~~~~~~~~~t~~T~f~i~SiTK~~ta~~v~~lv~~G~l~ld~~v~ 561 (977)
+.+-+..++ ..|+++|++ +++..|++||+||.+|+.+++..+++|+++||++|.
T Consensus 11 i~a~sail~D~~tG~vL~~k-------------n~d~~~~~AS~tKlmTa~~vl~~i~~G~l~ld~~v~ 66 (352)
T 3ita_A 11 VDARAWILMDYASGKVLAEG-------------NADEKLDPASLTKIMTSYVVGQALKADKIKLTDMVT 66 (352)
T ss_dssp CCSSEEEEEETTTCCEEEEE-------------STTCCBCCGGGHHHHHHHHHHHHHHTTSSCTTCEEE
T ss_pred cceeEEEEEECCCCCEeEEE-------------CCCCcccchHHHHHHHHHHHHHHHHcCCCCCCCEEE
Confidence 334444454 468888752 567889999999999999999999999999999874
|
| >1alq_A CP254 beta-lactamase; hydrolase, circular permuted, antibiotic resistance; 1.80A {Staphylococcus aureus} SCOP: e.3.1.1 | Back alignment and structure |
|---|
Probab=97.70 E-value=3.8e-05 Score=82.66 Aligned_cols=100 Identities=15% Similarity=0.092 Sum_probs=62.4
Q ss_pred CCCCcceeecchHHHHHHHHHHHHHCCCcCcCCchhhhccccccCCCCCCcHHHHhcCcCCCCCCcCCCCCCCCcCCCCH
Q 002031 526 QPDSLFPVFSVTKGITAGMLHWLVDNGKLKLEENIANIWPEFKSNGKDLIKVHHVLNHTSGLHNVSVDLSSENPLLICDW 605 (977)
Q Consensus 526 t~~T~f~i~SiTK~~ta~~v~~lv~~G~l~ld~~v~~ylP~~~~~~~~~iTir~LLsHtSGl~~~~~~~~~~~~~~~~~~ 605 (977)
+++..|+.||++|.+|+++++..+++|+ ||++|.- +-++++.+ ||+.... .....+.
T Consensus 76 n~d~~~~~ASt~Kl~ta~~~l~~v~~G~--ld~~v~i-------------~~~~~~~~-s~i~~~~-------~g~~~tl 132 (266)
T 1alq_A 76 NSDKRFAYASTSKAINSAILLEQVPYNK--LNKKVHI-------------NKDDIVAY-SPILEKY-------VGKDITL 132 (266)
T ss_dssp STTSCEECGGGHHHHHHHHHHHSSCGGG--TTCEEEE-------------CGGGCCSS-CTTGGGG-------TTEEEEH
T ss_pred CCCCeEecHHHHHHHHHHHHHHHHhcCC--CCceEEe-------------cHHHhcCC-CCceecC-------CCCceeH
Confidence 4578899999999999999999999999 8887751 11122222 2332210 1113456
Q ss_pred HHHHHHHHccCCCCCCCCceecccCcHHHHHHHHHHHHhCCCHHHHHHHHcccccCCCCccC
Q 002031 606 DECLNRIALSAPETEPGQEQLYHYLSFGWLCGGIIERASGKKFQEILEEGIIQPLSIDGELY 667 (977)
Q Consensus 606 ~~~~~~l~~~~~~~~pG~~~~Ysn~~~~~llg~iiE~vtG~~~~~~l~~~if~PLGm~~t~~ 667 (977)
++++..+.. ||+ |. ....+++++.|. +-+.+ .+..|||++|.+
T Consensus 133 ~~Ll~~mi~------------~Sd-N~--Aa~~L~~~lgG~---~~~n~-~~~~lG~~~T~~ 175 (266)
T 1alq_A 133 KALIEASMT------------YSD-NT--ANNKIIKEIGGI---KKVKQ-RLKELGDKVTNP 175 (266)
T ss_dssp HHHHHHHHH------------HCC-HH--HHHHHHHHHTCH---HHHHH-HHHHTTCCSCCC
T ss_pred HHHHHHHHh------------cCC-HH--HHHHHHHHcCCH---HHHHH-HHHHcCCCCccc
Confidence 676665443 332 22 345677787773 33543 467799999855
|
| >3mzf_A D-alanyl-D-alanine carboxypeptidase DACA; beta-lactam antibiotic, penicillin-binding protein, DD- carboxypeptidase, hydrolase; HET: IM2; 1.50A {Escherichia coli} PDB: 1nzu_A 1nzo_A* 3beb_A* 3bec_A* 3mzd_A* 3mze_A* 1z6f_A* 1nj4_A 1hd8_A 1sdn_A 4drt_A | Back alignment and structure |
|---|
Probab=97.68 E-value=0.00039 Score=77.61 Aligned_cols=54 Identities=20% Similarity=0.189 Sum_probs=42.9
Q ss_pred ccceEEEEE--ecCeeEEEeeccccCCCCCCCCCCCCcceeecchHHHHHHHHHHHHHCCCcCcCCchh
Q 002031 495 ILGIQVCAY--KDGEVIIDTSAGMLGRYDPRPVQPDSLFPVFSVTKGITAGMLHWLVDNGKLKLEENIA 561 (977)
Q Consensus 495 ~pG~svaVv--~~g~~v~~~~~G~~~~~~~~~~t~~T~f~i~SiTK~~ta~~v~~lv~~G~l~ld~~v~ 561 (977)
+.+-+..++ ..|++++++ +++..|++||+||.+|+.+++..+++|+++||++|.
T Consensus 15 i~a~sail~D~~tG~vL~~k-------------n~d~~~~~AS~tKlmTa~~vl~~i~~G~l~ld~~v~ 70 (363)
T 3mzf_A 15 IDAESYILIDYNSGKVLAEQ-------------NADVRRDPASLTKMMTSYVIGQAMKAGKFKETDLVT 70 (363)
T ss_dssp CCEEEEEEEETTTCCEEEEE-------------STTCCBCCGGGHHHHHHHHHHHHHHTTSCCTTCEEE
T ss_pred cceeEEEEEECCCCCEeEEE-------------CCCCcCcchHHHHHHHHHHHHHHHHcCCCCCCCEEE
Confidence 334444444 467887742 567889999999999999999999999999999864
|
| >1nw1_A Choline kinase (49.2 KD); phospholipid synthesis, protein kinase fold, transferase; 2.02A {Caenorhabditis elegans} SCOP: d.144.1.8 | Back alignment and structure |
|---|
Probab=97.65 E-value=0.00022 Score=82.16 Aligned_cols=53 Identities=9% Similarity=0.128 Sum_probs=36.2
Q ss_pred HHHHHHHHHHhCCChhhc-ccccCccccccccccEEEEEEecC--------CCEEEEEEecC
Q 002031 100 QEVSQTIEREFGESMGGM-FMDFVETPLATASIAQVHRATLVD--------GRQVVVKVQHQ 152 (977)
Q Consensus 100 ~~v~~~l~~elg~~~~~~-f~~~d~~piasaSigqV~~A~l~~--------G~~VAVKv~~p 152 (977)
+.+++++.+-++..|..+ -..++-++|+.|-...||+....+ ++.|+||+-++
T Consensus 54 ~~a~~l~~~~l~~~w~~~~~~~~~v~~l~gG~tN~~y~v~~~~~~~~~~~~~~~~vlRi~~~ 115 (429)
T 1nw1_A 54 ERAHMLCARFLGGAWKTVPLEHLRISRIKGGMSNMLFLCRLSEVYPPIRNEPNKVLLRVYFN 115 (429)
T ss_dssp HHHHHHHHHHHCTHHHHCCGGGEEEEEECCCTTEEEEEEEECTTSCCSSSCCSEEEEEEECS
T ss_pred HHHHHHHHHhccCCcCCCCccceEEEEeCCCcccceEEEEeCCCccccCCCCceEEEEEeCC
Confidence 345566665566555432 123445789999999999998753 58999999754
|
| >3qhy_A Beta-lactamase; enyzme-inhibitor complex, beta-propeller, protein:protein interaction; 2.06A {Bacillus anthracis} | Back alignment and structure |
|---|
Probab=97.62 E-value=0.0013 Score=70.70 Aligned_cols=65 Identities=22% Similarity=0.284 Sum_probs=43.5
Q ss_pred cchHHHHHHHHHHHhccCCCccceEEEEE--ecCeeEEEeeccccCCCCCCCCCCCCcceeecchHHHHHHHHHHHHHCC
Q 002031 475 HSDVEAKLRDFLVELGNDGKILGIQVCAY--KDGEVIIDTSAGMLGRYDPRPVQPDSLFPVFSVTKGITAGMLHWLVDNG 552 (977)
Q Consensus 475 ~~~~~~~l~~~l~~~~~~~~~pG~svaVv--~~g~~v~~~~~G~~~~~~~~~~t~~T~f~i~SiTK~~ta~~v~~lv~~G 552 (977)
...+.+.+.+++.+.- .- ++|.|+ ..|+++ . + +++..|+.||++|.+++.+++..+++|
T Consensus 11 ~~~l~~~l~~l~~~~~---~~--~gv~v~d~~tg~~l-~--~-----------n~d~~~~~AS~~Kl~~~~~~l~~~~~g 71 (271)
T 3qhy_A 11 NQATHKEFSQLEKKFD---AR--LGVYAIDTGTNQTI-A--Y-----------RPNERFAFASTYKALAAGVLLQQNSTK 71 (271)
T ss_dssp ---CHHHHHHHHHHHT---CE--EEEEEEETTTCCEE-E--E-----------STTCCEECGGGHHHHHHHHHHHHSCGG
T ss_pred hHHHHHHHHHHHHhcC---Ce--EEEEEEECCCCCEE-E--E-----------CCCCcccchHHHHHHHHHHHHHHhhCC
Confidence 4456666776665531 12 234444 456655 2 2 567889999999999999999999888
Q ss_pred CcCcCCch
Q 002031 553 KLKLEENI 560 (977)
Q Consensus 553 ~l~ld~~v 560 (977)
+||++|
T Consensus 72 --~ld~~v 77 (271)
T 3qhy_A 72 --KLDEVI 77 (271)
T ss_dssp --GGGSEE
T ss_pred --CCCCeE
Confidence 677765
|
| >3feg_A Choline/ethanolamine kinase; non-protein kinase, choline kinase, structural genomics CONS SGC, hemicholinium-3, phosphorylation; HET: HC7 ADP AMP; 1.30A {Homo sapiens} PDB: 3lq3_A* 2ig7_A* | Back alignment and structure |
|---|
Probab=97.60 E-value=0.0002 Score=80.94 Aligned_cols=165 Identities=12% Similarity=0.134 Sum_probs=95.9
Q ss_pred CHHHHHHHHHHHhCCChhhc-ccccCccccccccccEEEEEEec--------CCCEEEEEEecCChhhhhHhhHHHHHHH
Q 002031 98 PVQEVSQTIEREFGESMGGM-FMDFVETPLATASIAQVHRATLV--------DGRQVVVKVQHQGIKTIILEDLKNAKSI 168 (977)
Q Consensus 98 ~~~~v~~~l~~elg~~~~~~-f~~~d~~piasaSigqV~~A~l~--------~G~~VAVKv~~p~i~~~~~~Dl~~l~~l 168 (977)
-.+.+.+++.+-++..|..+ -..++-+++..|-..++|+.+.. +++.|++|+..+....
T Consensus 29 ~~~~~~~~~~~~l~~~W~~~~~~~l~v~~lsGG~TN~~y~v~~~~~~~~~~~~~~~~vlR~~g~~~~~------------ 96 (379)
T 3feg_A 29 AERRAYQWCREYLGGAWRRVQPEELRVYPVSGGLSNLLFRCSLPDHLPSVGEEPREVLLRLYGAILQG------------ 96 (379)
T ss_dssp HHHHHHHHHHHHHCGGGGGCCGGGCCCEEC-----CCEEEEECCTTSCCCSSCCSEEEEEECC---CC------------
T ss_pred HHHHHHHHHHHHccCcCCCCCcCceEEEEcCCcccccEEEEEeCCCccccCCCCCeEEEEECCCccch------------
Confidence 34456667777777667654 24566789999999999999874 3589999985332110
Q ss_pred HHHHHhhCCCCCCchhHHHHhhhcccccCcHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeeecCCceEEeec
Q 002031 169 VDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQSSETVLILEF 248 (977)
Q Consensus 169 ~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~~~~~vLVmE~ 248 (977)
-.++.+|++++..+... ++ .|+++.....-+||||
T Consensus 97 --------------------------~~~~~rE~~vl~~L~~~------------------gv-~P~ll~~~~~g~v~e~ 131 (379)
T 3feg_A 97 --------------------------VDSLVLESVMFAILAER------------------SL-GPQLYGVFPEGRLEQY 131 (379)
T ss_dssp --------------------------HHHHHHHHHHHHHHHHT------------------TS-SCCEEEEETTEEEEEC
T ss_pred --------------------------HHHHHHHHHHHHHHHhc------------------CC-CCeEEEEcCCccEEEE
Confidence 01334688888877652 23 4787763333599999
Q ss_pred cCCCCCCChH--------H-------HHhcC------CC-H-HHHHHHH-------------------------HHHHHH
Q 002031 249 MDGIRLNDCE--------S-------LEAFG------VN-K-QKVVEEI-------------------------TRAYAH 280 (977)
Q Consensus 249 i~G~~L~~~~--------~-------~~~~~------~~-~-~~l~~~l-------------------------~~~~l~ 280 (977)
++|..+.... . +.... .. . .++.+.+ ++. ++
T Consensus 132 i~G~~l~~~~l~~p~~~~~ia~~La~LH~~~~~~~~~~~~l~~~i~~w~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-L~ 210 (379)
T 3feg_A 132 IPSRPLKTQELREPVLSAAIATKMAQFHGMEMPFTKEPHWLFGTMERYLKQIQDLPPTGLPEMNLLEMYSLKDEMGN-LR 210 (379)
T ss_dssp CSEEECCGGGGGCHHHHHHHHHHHHHHHTCCCSSCCSCCHHHHHHHHHHHHHHHCCCCSCCSCCHHHHTTHHHHHHH-HH
T ss_pred ecCccCChhHhCCHHHHHHHHHHHHHHhCCCCCCCCCcccHHHHHHHHHHHHHhccCcccchhhhhhhHHHHHHHHH-HH
Confidence 9998886321 0 01110 11 1 1111111 011 11
Q ss_pred HHH-----hcCccccCCCCCCeEEccC--CCCceEEEecccccccCH
Q 002031 281 QIY-----VDGFFNGDPHPGNFLVSKD--PPHRPILLDFGLTKKLSS 320 (977)
Q Consensus 281 ~i~-----~~G~~H~D~hPgNIlv~~~--~~g~i~LiDFG~~~~l~~ 320 (977)
..+ ...++|+|++++|||++.+ +++.+.||||-.++.-++
T Consensus 211 ~~L~~~~~~~~~~H~D~~~~Nil~~~~~~~~~~~~~IDwE~a~~~~~ 257 (379)
T 3feg_A 211 KLLESTPSPVVFCHNDIQEGNILLLSEPENADSLMLVDFEYSSYNYR 257 (379)
T ss_dssp HHHHTSCCCEEEECSCCCGGGEEEESCC---CCEEECCCTTCEEEEH
T ss_pred HHHhhcCCCcEEEcCCCCCCeEEEcCCCCccCcEEEEecccCCcCCh
Confidence 112 1478999999999999854 136899999999886554
|
| >3ny4_A Beta-lactamase, penicillinase; penicillin binding protein, beta-lactam complex, hydrolase-A complex; HET: SMX; 1.22A {Mycobacterium tuberculosis} PDB: 3m6b_A* 3dwz_A* 3iqa_A* 3cg5_A* 3m6h_A* 4df6_A* 2gdn_A 3vfh_A* 3vff_A* 3n8l_A* 3n6i_A* 3n7w_A* 3n8r_A* 3n8s_A* 3nbl_A* 3nc8_A* 3nck_A* 3nde_A* 3ndg_A* | Back alignment and structure |
|---|
Probab=97.57 E-value=0.00099 Score=71.45 Aligned_cols=33 Identities=15% Similarity=0.075 Sum_probs=28.4
Q ss_pred CCCCcceeecchHHHHHHHHHHHHHCCCcCcCCch
Q 002031 526 QPDSLFPVFSVTKGITAGMLHWLVDNGKLKLEENI 560 (977)
Q Consensus 526 t~~T~f~i~SiTK~~ta~~v~~lv~~G~l~ld~~v 560 (977)
+++..|+.||++|.+++.+++..+++| +||++|
T Consensus 33 n~d~~~~~AS~~Kl~~~~~~l~~~~~~--~ld~~v 65 (265)
T 3ny4_A 33 RADERFAFCSTFAAPLVAAVLHQNPLT--HLDKLI 65 (265)
T ss_dssp STTSCEECGGGGHHHHHHHHHHHSCGG--GGGCEE
T ss_pred CCCCceechHHHHHHHHHHHHHHhhcC--CCCceE
Confidence 567889999999999999999998876 667664
|
| >3hun_A Penicillin-binding protein 4; ampicillin, beta-lactamase, serine type D-Ala, D-Ala-carboxypeptidase, antibiotics; HET: ZZ7; 2.00A {Staphylococcus aureus} PDB: 3hum_A* | Back alignment and structure |
|---|
Probab=97.29 E-value=0.0013 Score=74.86 Aligned_cols=45 Identities=22% Similarity=0.336 Sum_probs=39.2
Q ss_pred ecCeeEEEeeccccCCCCCCCCCCCCcceeecchHHHHHHHHHHHHHCCCcCcCCchh
Q 002031 504 KDGEVIIDTSAGMLGRYDPRPVQPDSLFPVFSVTKGITAGMLHWLVDNGKLKLEENIA 561 (977)
Q Consensus 504 ~~g~~v~~~~~G~~~~~~~~~~t~~T~f~i~SiTK~~ta~~v~~lv~~G~l~ld~~v~ 561 (977)
..|++++++ +++..+++||+||.+|+.+++..+++|+|+||++|.
T Consensus 79 ~TG~vL~~k-------------Nad~~~~pAS~TKlMTa~~vle~i~~Gkl~Ld~~Vt 123 (453)
T 3hun_A 79 QTGQLLYQY-------------NIDTKWNPASMTKLMTMYLTLEAVNKGQLSLDDTVT 123 (453)
T ss_dssp TTSBEEEEE-------------STTCCBCCGGGHHHHHHHHHHHHHHTTSSCTTCEEE
T ss_pred CCCCEEEEE-------------CCCCcccchHHHHHHHHHHHHHHHhcCCCCCCCEEE
Confidence 567777753 567889999999999999999999999999999864
|
| >3mes_A Choline kinase; malaria, structural genomics, structural genomics consortium, SGC, transferase; HET: ADP DME PT3; 2.35A {Cryptosporidium parvum} | Back alignment and structure |
|---|
Probab=97.28 E-value=0.0011 Score=76.07 Aligned_cols=115 Identities=16% Similarity=0.191 Sum_probs=69.0
Q ss_pred HHHHHHHHhCCCCC----CHHHHHHHHHHHhCCChhhcc-cccCccccccccccEEEEEEecC--------CCEEEEEEe
Q 002031 84 ISLLKQLQDSLPPR----PVQEVSQTIEREFGESMGGMF-MDFVETPLATASIAQVHRATLVD--------GRQVVVKVQ 150 (977)
Q Consensus 84 ~~~L~~Lqd~~p~~----~~~~v~~~l~~elg~~~~~~f-~~~d~~piasaSigqV~~A~l~~--------G~~VAVKv~ 150 (977)
++-+..|.+-++.+ +.+.+.+++.+.+.. |..+- ..++-+++..|-...+|+....+ ++.+++|+.
T Consensus 32 ~~~~~~l~~~~~~~~~~~d~~~l~~l~~~~~p~-w~~~~~~~~~v~~lsGG~TN~~y~v~~~~~~~~~~~~~~~~vlRi~ 110 (424)
T 3mes_A 32 IELGDKLSESIRSFSTITDTEIIIGICRKNIPG-WKEINESYIEVKQIFSGLTNQLFVVSIVNESMSLSLKHPRILFRIY 110 (424)
T ss_dssp ------------------CHHHHHHHHHHHSTT-CTTCCGGGEEEEEECCCSSSEEEEEEECCC-----CCCSEEEEEEC
T ss_pred ecccccchHHHHHhccCCCHHHHHHHHHHHcCc-cccCCCCceEEEEcCCCcccceEEEEeCCCcccccCCCCeEEEEEC
Confidence 34444555444443 456677777766543 43211 23456789999999999998753 689999986
Q ss_pred cCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCcHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCC
Q 002031 151 HQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEAENTRIVSANLGCKNKHEDSNKKPAYEVD 230 (977)
Q Consensus 151 ~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (977)
.++... -+|..+|.+.+..+... +
T Consensus 111 g~~t~~--------------------------------------~idR~~E~~~l~~L~~~------------------g 134 (424)
T 3mes_A 111 GKHVGK--------------------------------------FYDSKVELDVFRYLSNI------------------N 134 (424)
T ss_dssp CCCC-C--------------------------------------CCCHHHHHHHHHHHHHT------------------T
T ss_pred CCCcch--------------------------------------hcCHHHHHHHHHHHHhc------------------C
Confidence 554321 13556788888887651 2
Q ss_pred eEeceeeecCCceEEeeccCCCCCCC
Q 002031 231 VLIPEVIQSSETVLILEFMDGIRLND 256 (977)
Q Consensus 231 v~vP~v~~~~~~vLVmE~i~G~~L~~ 256 (977)
+ +|+++.....++||||++|..+..
T Consensus 135 i-~P~l~~~~~~~~I~efI~G~~l~~ 159 (424)
T 3mes_A 135 I-APNIIADFPEGRIEEFIDGEPLTT 159 (424)
T ss_dssp S-SCCEEEEETTEEEEECCCSEECCT
T ss_pred C-CCCEEEEcCCCEEEEEeCCccCCh
Confidence 3 688776555689999999988753
|
| >2qg7_A Ethanolamine kinase PV091845; malaria, SGC, structural genomics consortium, transferase; 2.41A {Plasmodium vivax} | Back alignment and structure |
|---|
Probab=97.24 E-value=0.00054 Score=79.48 Aligned_cols=79 Identities=13% Similarity=0.134 Sum_probs=52.1
Q ss_pred ccCccccccccccEEEEEEecC-CCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCc
Q 002031 120 DFVETPLATASIAQVHRATLVD-GRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDF 198 (977)
Q Consensus 120 ~~d~~piasaSigqV~~A~l~~-G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~ 198 (977)
.++-++|+.|-...+|+....+ ++.+++|+..++.... +|.
T Consensus 110 ~~~i~~lsgG~tN~~y~v~~~~~~~~~vLRi~g~~~~~~--------------------------------------idR 151 (458)
T 2qg7_A 110 SLEFQIINGGITNILIKVKDMSKQAKYLIRLYGPKTDEI--------------------------------------INR 151 (458)
T ss_dssp TEEEEEECC--CEEEEEEEETTTTEEEEEEEECC-CCSC--------------------------------------SCH
T ss_pred CeEEEEcCCCeEeEEEEEEECCCCceEEEEECCCChhhh--------------------------------------cCH
Confidence 3445789999999999998754 5889999876543211 234
Q ss_pred HHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeeecCCceEEeeccCCCCCC
Q 002031 199 NSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQSSETVLILEFMDGIRLN 255 (977)
Q Consensus 199 ~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~~~~~vLVmE~i~G~~L~ 255 (977)
.+|+..+..+.. ..+ .|+++......+||||++|.++.
T Consensus 152 ~~E~~vl~~L~~------------------~gl-~P~ll~~~~~G~v~e~I~G~~l~ 189 (458)
T 2qg7_A 152 EREKKISCILYN------------------KNI-AKKIYVFFTNGRIEEFMDGYALS 189 (458)
T ss_dssp HHHHHHHHHHTT------------------SSS-BCCEEEEETTEEEEECCCSEECC
T ss_pred HHHHHHHHHHHh------------------cCC-CCCEEEEeCCeEEEEeeCCccCC
Confidence 567777776643 122 57777633456799999998876
|
| >3lez_A Beta-lactamase; antibiotic resistance, halotolerant, DEEP- SEA bacterium, hydrolase; HET: EPE; 1.25A {Oceanobacillus iheyensis} SCOP: e.3.1.1 | Back alignment and structure |
|---|
Probab=97.23 E-value=0.0082 Score=64.05 Aligned_cols=33 Identities=24% Similarity=0.296 Sum_probs=28.4
Q ss_pred CCCCcceeecchHHHHHHHHHHHHHCCCcCcCCch
Q 002031 526 QPDSLFPVFSVTKGITAGMLHWLVDNGKLKLEENI 560 (977)
Q Consensus 526 t~~T~f~i~SiTK~~ta~~v~~lv~~G~l~ld~~v 560 (977)
+++..|+.||++|.+++.+++..+++| +||++|
T Consensus 32 n~d~~~~~AS~~Kl~~~~~~l~~~~~g--~ld~~v 64 (260)
T 3lez_A 32 RENERFAYTSTFKPLAVGAVLQTKSDE--ELEETI 64 (260)
T ss_dssp STTSEEECGGGGHHHHHHHHHHHCCHH--HHHSEE
T ss_pred CCCCcccchHHHHHHHHHHHHHhccCC--CCCceE
Confidence 568899999999999999999998887 566654
|
| >4dxb_A RG13, maltose-binding periplasmic protein, beta-lactama chimera; TEM, beta-lactamase, MBP, allosteric regulation, zinc bindin maltose binding; 2.29A {Escherichia coli} PDB: 4dxc_A | Back alignment and structure |
|---|
Probab=97.08 E-value=0.0042 Score=75.19 Aligned_cols=36 Identities=28% Similarity=0.475 Sum_probs=33.3
Q ss_pred CCCCcceeecchHHHHHHHHHHHHHCCCcCcCCchh
Q 002031 526 QPDSLFPVFSVTKGITAGMLHWLVDNGKLKLEENIA 561 (977)
Q Consensus 526 t~~T~f~i~SiTK~~ta~~v~~lv~~G~l~ld~~v~ 561 (977)
..|..|+++|++|.+++++++..+++|+++||++|.
T Consensus 417 ~~d~~fp~aS~~K~~~~~~~l~~~~~g~~~l~~~v~ 452 (637)
T 4dxb_A 417 RPEERFPMMSTFKVLLCGAVLSRIDAGQEQLGRRIH 452 (637)
T ss_dssp STTSCEECGGGGHHHHHHHHHHHHHTTSCCTTCEEC
T ss_pred CCCCeeccHHHHHHHHHHHHHHHHhcCCCCCCceEE
Confidence 457789999999999999999999999999999873
|
| >3mfd_A D-alanyl-D-alanine carboxypeptidase DACB; penicillin-binding protein 5*, beta-lactamase, structural GE PSI-2, protein structure initiative; HET: CIT; 1.75A {Bacillus subtilis} | Back alignment and structure |
|---|
Probab=96.75 E-value=0.0091 Score=65.55 Aligned_cols=117 Identities=15% Similarity=0.194 Sum_probs=65.1
Q ss_pred ceEEEEE--ecCeeEEEeeccccCCCCCCCCCCCCcceeecchHHHHHHHHHHHHHCCCcCcCCchhhhccccccCCCCC
Q 002031 497 GIQVCAY--KDGEVIIDTSAGMLGRYDPRPVQPDSLFPVFSVTKGITAGMLHWLVDNGKLKLEENIANIWPEFKSNGKDL 574 (977)
Q Consensus 497 G~svaVv--~~g~~v~~~~~G~~~~~~~~~~t~~T~f~i~SiTK~~ta~~v~~lv~~G~l~ld~~v~~ylP~~~~~~~~~ 574 (977)
+-+..++ ..|+++|++ +++..+++||+||.+|+.++ +++|+ ||++|.
T Consensus 9 A~sail~D~~tG~vL~~k-------------n~d~~~~pAS~tKlmTa~~a---l~~g~--ld~~v~------------- 57 (334)
T 3mfd_A 9 AKSAIIIDGASGRVLYAK-------------DEHQKRRIASITKIMTAVLA---IESGK--MDQTVT------------- 57 (334)
T ss_dssp CSEEEEEETTTCCEEEEE-------------STTCCBCCGGGGHHHHHHHH---HHTTC--TTSEEE-------------
T ss_pred ccEEEEEECCCCcEeeEE-------------CCCCcccchHHHHHHHHHHH---HhcCC--CCCeEE-------------
Confidence 3344444 468888753 45788999999999999774 57886 666543
Q ss_pred CcHHHHhcCcCCCCCCcCCCCCCCCcCCCCHHHHHHHHHccCCCCCCCCceecccCcHHHHHHHHHHHHhCC--CHHHHH
Q 002031 575 IKVHHVLNHTSGLHNVSVDLSSENPLLICDWDECLNRIALSAPETEPGQEQLYHYLSFGWLCGGIIERASGK--KFQEIL 652 (977)
Q Consensus 575 iTir~LLsHtSGl~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~pG~~~~Ysn~~~~~llg~iiE~vtG~--~~~~~l 652 (977)
|+-......-|.+.- .+....+.++++..+.- +|. |- .+-.++|.+.|- .|-+.|
T Consensus 58 vs~~a~~~~gS~~~l--------~~G~~~tv~dLl~~~~i------------~S~-Nd--Aa~aLAe~igGs~~~Fv~~M 114 (334)
T 3mfd_A 58 VSANAVRTEGSAIYL--------TEGQKVKLKDLVYGLML------------RSG-ND--AAVAIAEHVGGSLDGFVYMM 114 (334)
T ss_dssp CCHHHHHCCSSCCCC--------CTTCEEEHHHHHHHHHH------------HCC-HH--HHHHHHHHHHSSHHHHHHHH
T ss_pred eCHHHhccCCceeee--------CCCCEeEHHHHHHHHHH------------hCh-HH--HHHHHHHHhhCCHHHHHHHH
Confidence 111111111122210 11123455666655431 221 11 233455666662 355566
Q ss_pred HHHcccccCCCCccCC
Q 002031 653 EEGIIQPLSIDGELYI 668 (977)
Q Consensus 653 ~~~if~PLGm~~t~~~ 668 (977)
.++ ..-|||++|.|.
T Consensus 115 N~~-A~~LGm~~T~f~ 129 (334)
T 3mfd_A 115 NQK-AEQLGMKNTRFQ 129 (334)
T ss_dssp HHH-HHHHTCTTCBCS
T ss_pred HHH-HHHCCCcCcEEc
Confidence 664 678999999773
|
| >2bcf_A Probable D-alanyl-D-alanine carboxypeptidase DACB2; penicillin-binding protein, DD-2 carboxypeptidase, directed evolution; 2.30A {Mycobacterium tuberculosis} | Back alignment and structure |
|---|
Probab=95.32 E-value=0.066 Score=57.42 Aligned_cols=48 Identities=15% Similarity=0.052 Sum_probs=34.7
Q ss_pred ccceEEEEE--ecCeeEEEeeccccCCCCCCCCCCCCcceeecchHHHHHHHHHHHHHCCCcCcCCch
Q 002031 495 ILGIQVCAY--KDGEVIIDTSAGMLGRYDPRPVQPDSLFPVFSVTKGITAGMLHWLVDNGKLKLEENI 560 (977)
Q Consensus 495 ~pG~svaVv--~~g~~v~~~~~G~~~~~~~~~~t~~T~f~i~SiTK~~ta~~v~~lv~~G~l~ld~~v 560 (977)
+.+-++.|+ ..|+++|++ +++..|++||++|.+|+++++..+ +||++|
T Consensus 17 ~~a~~~~v~D~~tG~vl~~~-------------n~d~~~~pAS~tKlmta~~~le~~-----~ld~~v 66 (276)
T 2bcf_A 17 GPAQTWIVADLDSGQVLAGR-------------DQNVAHPPASTIKVLLALVALDEL-----DLNSTV 66 (276)
T ss_dssp CSCSEEEEEETTTCEEEEEE-------------STTCCBCCGGGHHHHHHHHHHHHC-----CTTCEE
T ss_pred ccccEEEEEECCCCCEEEEE-------------CCCCcCCcHHHHHHHHHHHHHHhC-----CCCCEE
Confidence 334456665 468887743 457889999999999999998754 366654
|
| >3g15_A CK, chetk-alpha, choline kinase alpha; non-protein kinase, structural genomics CONS SGC, hemicholinium-3, transferase; HET: ADP HC6; 1.70A {Homo sapiens} PDB: 3f2r_A* 2i7q_A 2cko_A 2ckp_A* 2ckq_A* | Back alignment and structure |
|---|
Probab=95.18 E-value=0.094 Score=59.46 Aligned_cols=55 Identities=11% Similarity=0.090 Sum_probs=34.6
Q ss_pred HHHHHhCCChhhcc-cccCccccccccccEEEEEEecC--------CCEEEEEEecCChhhhhH
Q 002031 105 TIEREFGESMGGMF-MDFVETPLATASIAQVHRATLVD--------GRQVVVKVQHQGIKTIIL 159 (977)
Q Consensus 105 ~l~~elg~~~~~~f-~~~d~~piasaSigqV~~A~l~~--------G~~VAVKv~~p~i~~~~~ 159 (977)
.+.+-++..|.++= ++++-++|.-|-.-.+|+.+..+ ++.|+++|.-++....+.
T Consensus 38 ~c~~~l~g~W~~v~~~~l~v~~lsGG~SN~~y~v~~~~~~~~~~~~~~~~llRi~g~~~~~~~~ 101 (401)
T 3g15_A 38 WCKEFLPGAWRGLREDEFHISVIRGGLSNMLFQCSLPDTTATLGDEPRKVLLRLYGAILQMRSC 101 (401)
T ss_dssp HHHHHSCGGGTTCCGGGCEEEEEECSSEEEEEEEECCTTCCCSSSCCSEEEEEEEEC-------
T ss_pred HHHHhCCccccCCCcCCEEEEEeCCccccceEEEEECCCCcccccCCCeEEEEeCCCCccchhh
Confidence 45555665555432 35667899888889999998754 368999998887664443
|
| >3cjm_A Putative beta-lactamase; NP_815223.1, structural genomics, J center for structural genomics, JCSG, protein structure INI PSI-2, hydrolase; HET: MSE; 1.50A {Enterococcus faecalis} | Back alignment and structure |
|---|
Probab=94.82 E-value=0.041 Score=59.32 Aligned_cols=36 Identities=19% Similarity=0.067 Sum_probs=33.5
Q ss_pred CCCCcceeecchHHHHHHHHHHHHHCCCcCcCCchh
Q 002031 526 QPDSLFPVFSVTKGITAGMLHWLVDNGKLKLEENIA 561 (977)
Q Consensus 526 t~~T~f~i~SiTK~~ta~~v~~lv~~G~l~ld~~v~ 561 (977)
+++..|+.||++|.+|+++++..+++|+++||++|.
T Consensus 68 n~d~~~~~AS~~Kl~~a~~~l~~v~~G~l~ld~~v~ 103 (282)
T 3cjm_A 68 NGQHEFYTASTIKVPLTMLVADTVASGQKKWTDLIP 103 (282)
T ss_dssp STTCCEECGGGGHHHHHHHHHHHHHTTSCCTTCEEE
T ss_pred CCCCeeccHHHHHHHHHHHHHHHHHCCCCCCcceEE
Confidence 567889999999999999999999999999999874
|
| >2x02_A Beta-lactamase OXA-10; class D, hydrolase, antibiotic resistance; HET: KCX PG4; 1.35A {Pseudomonas aeruginosa} PDB: 1k4e_A* 1k6r_A* 1k6s_A* 1k4f_A* 2x01_A* 2wgv_A* 2wgw_A* 2wkh_A* 2wki_A 2rl3_A* 2hpb_A 2hp9_A 2hp6_A 2wgi_A* 2hp5_A 1fof_A 1k55_A* 1e4d_A* 1ewz_A 1k54_A* ... | Back alignment and structure |
|---|
Probab=93.12 E-value=0.17 Score=53.26 Aligned_cols=31 Identities=19% Similarity=0.086 Sum_probs=25.7
Q ss_pred CcceeecchHHHHHHHHHHHHHCCCcCcCCchhh
Q 002031 529 SLFPVFSVTKGITAGMLHWLVDNGKLKLEENIAN 562 (977)
Q Consensus 529 T~f~i~SiTK~~ta~~v~~lv~~G~l~ld~~v~~ 562 (977)
..|..||+.|.+|++++ .++|++++++.+.+
T Consensus 43 ~~~~pgStfK~~~~~aa---Le~g~~~~~~~i~~ 73 (248)
T 2x02_A 43 KEYLPASTFKIPNAIIG---LETGVIKNEHQVFK 73 (248)
T ss_dssp CEECCGGGGHHHHHHHH---HHHTSSCCTTCEEC
T ss_pred CCCCChHHHHHHHHHHH---HHcCCCCCCCeEEe
Confidence 34999999999999875 47899999888763
|
| >2xep_A ORF12; hydrolase; 1.50A {Streptomyces clavuligerus} PDB: 2xf3_A* 2xfs_A* 2xft_A 2xgn_A 2xh9_A* | Back alignment and structure |
|---|
Probab=92.08 E-value=0.19 Score=57.97 Aligned_cols=36 Identities=19% Similarity=0.207 Sum_probs=33.2
Q ss_pred CCCCcceeecchHHHHHHHHHHHHHCCCcCcCCchh
Q 002031 526 QPDSLFPVFSVTKGITAGMLHWLVDNGKLKLEENIA 561 (977)
Q Consensus 526 t~~T~f~i~SiTK~~ta~~v~~lv~~G~l~ld~~v~ 561 (977)
+++..|.+||++|.+++.+++..+++|+++||++|.
T Consensus 164 n~d~~~~~ASt~Kl~~a~~vl~~v~~G~l~ld~~v~ 199 (458)
T 2xep_A 164 APERPMPTGSAYKLYLMRALVAEIEKGTVGWDEILT 199 (458)
T ss_dssp STTSCEECGGGHHHHHHHHHHHHHHHTSSCTTCEEE
T ss_pred CCCCcCccHHHHHHHHHHHHHHHHhcCCCCCCCeEE
Confidence 557789999999999999999999999999999874
|
| >1cja_A Protein (actin-fragmin kinase); transferase; HET: AMP; 2.90A {Physarum polycephalum} SCOP: d.144.1.3 | Back alignment and structure |
|---|
Probab=91.90 E-value=2.5 Score=45.95 Aligned_cols=90 Identities=13% Similarity=0.266 Sum_probs=50.8
Q ss_pred ceEEeeccCCCCCCChHHH--HhcCCCHHHHHHHHHHHHHHHHHhcC---c---cccCCCCCCeEEccCCCCceEEEecc
Q 002031 242 TVLILEFMDGIRLNDCESL--EAFGVNKQKVVEEITRAYAHQIYVDG---F---FNGDPHPGNFLVSKDPPHRPILLDFG 313 (977)
Q Consensus 242 ~vLVmE~i~G~~L~~~~~~--~~~~~~~~~l~~~l~~~~l~~i~~~G---~---~H~D~hPgNIlv~~~~~g~i~LiDFG 313 (977)
-.++|||++|..|.+.... .. .+. .+..+.+.++++--++..+ + .+.-=.|+|||+..+ ++++++||.+
T Consensus 157 ~~l~meyv~G~~L~e~~~~~~~~-~f~-~~~~k~LG~Ii~FDi~InN~DR~Pl~W~n~GN~~NIL~~~~-n~~~~~IDhn 233 (342)
T 1cja_A 157 NILLMELVRGITLNKLTTTSAPE-VLT-KSTMQQLGSLMALDVIVNNSDRLPIAWTNEGNLDNIMLSER-GATVVPIDSK 233 (342)
T ss_dssp EEEEEECCCEEESTTCCSSSHHH-HSC-HHHHHHHHHHHHHHHHHTCCSSSCSSSCSCCCGGGEEEESB-TTCEEECSCC
T ss_pred ceehhhhcCCCccccchhhhhhh-hcC-HHHHHhhchhheehhhhcCCccCcccccCCCChhheEEeCC-CCeEEEEcCC
Confidence 3599999999998765221 01 022 2334444444433333222 1 111247899999875 3579999999
Q ss_pred cccccCHH-HHHHHHHHHHHHH
Q 002031 314 LTKKLSSS-MKQALAKMFFAAA 334 (977)
Q Consensus 314 ~~~~l~~~-~r~~~~~l~~a~~ 334 (977)
++..-+.. .-..+..++..+.
T Consensus 234 ~af~~~s~~y~~rv~~ll~~~~ 255 (342)
T 1cja_A 234 IIPLDASHPHGERVRELLRTLI 255 (342)
T ss_dssp CCCCCSSCTHHHHHHHHHHHHH
T ss_pred ccccCCcHHHHHHHHHHHHHHH
Confidence 98655443 3334444454444
|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| 977 | ||||
| d1ci9a_ | 377 | e.3.1.1 (A:) Esterase EstB {Burkholderia gladioli | 1e-21 | |
| d2drwa1 | 362 | e.3.1.1 (A:2-363) D-Amino acid amidase DaaA {Ochro | 1e-20 | |
| d1onha_ | 363 | e.3.1.1 (A:) AMPC beta-Lactamase, class C {Enterob | 2e-18 | |
| d2hdsa1 | 358 | e.3.1.1 (A:4-361) AMPC beta-Lactamase, class C {Es | 6e-18 | |
| d1ei5a3 | 333 | e.3.1.1 (A:3-335) D-aminopeptidase, N-terminal dom | 8e-17 | |
| d1yqsa1 | 345 | e.3.1.1 (A:3-347) D-ala carboxypeptidase/transpept | 8e-15 |
| >d1ci9a_ e.3.1.1 (A:) Esterase EstB {Burkholderia gladioli [TaxId: 28095]} Length = 377 | Back information, alignment and structure |
|---|
class: Multi-domain proteins (alpha and beta) fold: beta-lactamase/transpeptidase-like superfamily: beta-lactamase/transpeptidase-like family: beta-Lactamase/D-ala carboxypeptidase domain: Esterase EstB species: Burkholderia gladioli [TaxId: 28095]
Score = 95.6 bits (236), Expect = 1e-21
Identities = 72/319 (22%), Positives = 122/319 (38%), Gaps = 29/319 (9%)
Query: 476 SDVEAKLRDFLVELGNDGKILGIQVCAYKDGEVIIDTSAGMLGRYDPRPVQPDSLFPVFS 535
+ + A+L + + +++G + GE++ + G+ R RP++ D+LF + S
Sbjct: 2 ASLAARLDAVFDQALRERRLVGAVAIVARHGEILYRRAQGLADREAGRPMREDTLFRLAS 61
Query: 536 VTKGITAGMLHWLVDNGKLKLEENIANIWPEFKSNGK----DLIKVHHVLNHTSGLHNVS 591
VTK I A + LV G+L L+ + PEF+ L+ +HH+L HTSGL
Sbjct: 62 VTKPIVALAVLRLVARGELALDAPVTRWLPEFRPRLADGSEPLVTIHHLLTHTSGLGYWL 121
Query: 592 VD----------LSSENPLLICDWDECLNRIALSAPETEPGQEQLYHYLSFGWLCGGIIE 641
++ +S L D DE L R+A + PG + Y + G ++E
Sbjct: 122 LEGAGSVYDRLGISDGIDLRDFDLDENLRRLASAPLSFAPGSG--WQYSLALDVLGAVVE 179
Query: 642 RASGKKFQEILEEGIIQPLSIDGELYIGIPPGVESRLASLTIDTDDLNKVSGINNRPDLR 701
RA+G+ ++ + QPL + G R A D P
Sbjct: 180 RATGQPLAAAVDALVAQPLGMR---DCGFVSAEPERFAVPYHDGQP---------EPVRM 227
Query: 702 LPSSFQPDKISQLAAITPAVFNMLNIRRAIIPAANGHCSARALARYYAA-LADGGVVPPP 760
P AA+ A + A + SA + R A A+ G +P
Sbjct: 228 RDGIEVPLPEGHGAAVRFAPSRVFEPGAYPSGGAGMYGSADDVLRALEAIRANPGFLPET 287
Query: 761 HSRLSKPPLGSHPHIPKFP 779
+ ++ + P
Sbjct: 288 LADAARRDQAGVGAETRGP 306
|
| >d2drwa1 e.3.1.1 (A:2-363) D-Amino acid amidase DaaA {Ochrobactrum anthropi [TaxId: 529]} Length = 362 | Back information, alignment and structure |
|---|
class: Multi-domain proteins (alpha and beta) fold: beta-lactamase/transpeptidase-like superfamily: beta-lactamase/transpeptidase-like family: beta-Lactamase/D-ala carboxypeptidase domain: D-Amino acid amidase DaaA species: Ochrobactrum anthropi [TaxId: 529]
Score = 92.5 bits (228), Expect = 1e-20
Identities = 50/284 (17%), Positives = 95/284 (33%), Gaps = 18/284 (6%)
Query: 476 SDVEAKLRDFLVELGNDGKILGIQVCAYKDGEVIIDTSAGMLGRYDPRPVQPDSLFPVFS 535
SD+ ++ L + G ++G+ + GE +G +++ P+ D LF + S
Sbjct: 1 SDLNNAIQGILDDHVARG-VVGVSLALCLPGEETSLYQSGYADKFNKMPMTGDHLFRIAS 59
Query: 536 VTKGITAGMLHWLVDNGKLKLEENIANIWPEFKSNGKDLIKVHHVLNHTSGLHNVSVDLS 595
TK A LH LV +G + L+E I +P+ + V +LNH SGL + +
Sbjct: 60 CTKSFIATGLHLLVQDGTVDLDEPITRWFPDL--PKAAQMPVRILLNHRSGLPDFETSMP 117
Query: 596 SENPLLICDWDECLNRIALSAPETEPGQEQLYHYLSFGWLCGGIIERASGKKFQEILEEG 655
+ + + + + + + L G II +GK + + L
Sbjct: 118 MISDKSWTAQEIV--DFSFRHGVQKEPWHGMEYSNTGYVLAGMIIAHETGKPYSDHLRSR 175
Query: 656 IIQPLSIDGELYIGIPPGVESRLASLTIDTDDLNKVSGINNRPDLRLPSSFQPDKISQLA 715
I PL + R A + ++ +
Sbjct: 176 IFAPLGMKDTWVGTHETFPIEREARGYMHAAADDENPQWDVSGAGDPVDGVWDS------ 229
Query: 716 AITPAVFNMLNIRRAIIPAANGHCSARALARYYAALADGGVVPP 759
A + + R + ++ AL DG ++
Sbjct: 230 -------TEWFPLSGANAAGDMVSTPRDIVKFLNALFDGRILDQ 266
|
| >d1onha_ e.3.1.1 (A:) AMPC beta-Lactamase, class C {Enterobacter cloacae, P99, cephalosporinase [TaxId: 550]} Length = 363 | Back information, alignment and structure |
|---|
class: Multi-domain proteins (alpha and beta) fold: beta-lactamase/transpeptidase-like superfamily: beta-lactamase/transpeptidase-like family: beta-Lactamase/D-ala carboxypeptidase domain: AMPC beta-Lactamase, class C species: Enterobacter cloacae, P99, cephalosporinase [TaxId: 550]
Score = 85.9 bits (211), Expect = 2e-18
Identities = 42/218 (19%), Positives = 89/218 (40%), Gaps = 10/218 (4%)
Query: 473 PIHSD-VEAKLRDFLVELGNDGKILGIQVCAYKDGEVIIDTSAGMLGRYDPRPVQPDSLF 531
P+ + + + + L + G+ V G+ + G +PV P +LF
Sbjct: 1 PVSEKQLAEVVANTVTPLMKAQSVPGMAVAVIYQGKPHYY-TFGKADIAANKPVTPQTLF 59
Query: 532 PVFSVTKGITAGMLHWLVDNGKLKLEENIANIWPEFKSNGKDLIKVHHVLNHTSGLHNVS 591
+ S++K T + + G++ L++ + WP+ I++ + +T+G +
Sbjct: 60 ELGSISKTFTGVLGGDAIARGEISLDDPVTRYWPQLTGKQWQGIRMLDLATYTAGGLPL- 118
Query: 592 VDLSSENPLLICDWDECLNRIALSAPETEPGQEQLYHYLSFGWLCGGIIERASGKKFQEI 651
+ P + D L P+ +PG +LY S L G + + SG +++
Sbjct: 119 -----QVPDEVTDNASLLRFYQNWQPQWKPGTTRLYANASI-GLFGALAVKPSGMPYEQA 172
Query: 652 LEEGIIQPLSIDGELYIGIPPGVESRLASLTIDTDDLN 689
+ +++PL +D +I +P E+ A D +
Sbjct: 173 MTTRVLKPLKLD-HTWINVPKAEEAHYAWGYRDGKAVR 209
|
| >d2hdsa1 e.3.1.1 (A:4-361) AMPC beta-Lactamase, class C {Escherichia coli, cephalosporinase [TaxId: 562]} Length = 358 | Back information, alignment and structure |
|---|
class: Multi-domain proteins (alpha and beta) fold: beta-lactamase/transpeptidase-like superfamily: beta-lactamase/transpeptidase-like family: beta-Lactamase/D-ala carboxypeptidase domain: AMPC beta-Lactamase, class C species: Escherichia coli, cephalosporinase [TaxId: 562]
Score = 84.4 bits (207), Expect = 6e-18
Identities = 53/270 (19%), Positives = 106/270 (39%), Gaps = 9/270 (3%)
Query: 477 DVEAKLRDFLVELGNDGKILGIQVCAYKDGEVIIDTSAGMLGRYDPRPVQPDSLFPVFSV 536
+ + + L KI G+ V G+ + G +PV +LF + SV
Sbjct: 4 QINDIVHRTITPLIEQQKIPGMAVAVIYQGKPYYF-TWGYADIAKKQPVTQQTLFELGSV 62
Query: 537 TKGITAGMLHWLVDNGKLKLEENIANIWPEFKSNGKDLIKVHHVLNHTSGLHNVSVDLSS 596
+K T + + G++KL + WPE + + I + H+ +T+G L
Sbjct: 63 SKTFTGVLGGDAIARGEIKLSDPTTKYWPELTAKQWNGITLLHLATYTAGG------LPL 116
Query: 597 ENPLLICDWDECLNRIALSAPETEPGQEQLYHYLSFGWLCGGIIERASGKKFQEILEEGI 656
+ P + + L P PG ++LY S L G + + SG F++ ++ +
Sbjct: 117 QVPDEVKSSSDLLRFYQNWQPAWAPGTQRLYANSSI-GLFGALAVKPSGLSFEQAMQTRV 175
Query: 657 IQPLSIDGELYIGIPPGVESRLASLTIDTDDLNKVSGINNRPDLRLPSSFQPDKISQLAA 716
QPL ++ +I +PP E A + ++ G + + S+ + +
Sbjct: 176 FQPLKLN-HTWINVPPAEEKNYAWGYREGKAVHVSPGALDAEAYGVKSTIEDMARWVQSN 234
Query: 717 ITPAVFNMLNIRRAIIPAANGHCSARALAR 746
+ P N +++ I A + + + +
Sbjct: 235 LKPLDINEKTLQQGIQLAQSRYWQTGDMYQ 264
|
| >d1ei5a3 e.3.1.1 (A:3-335) D-aminopeptidase, N-terminal domain {Ochrobactrum anthropi [TaxId: 529]} Length = 333 | Back information, alignment and structure |
|---|
class: Multi-domain proteins (alpha and beta) fold: beta-lactamase/transpeptidase-like superfamily: beta-lactamase/transpeptidase-like family: beta-Lactamase/D-ala carboxypeptidase domain: D-aminopeptidase, N-terminal domain species: Ochrobactrum anthropi [TaxId: 529]
Score = 80.5 bits (197), Expect = 8e-17
Identities = 37/182 (20%), Positives = 70/182 (38%), Gaps = 6/182 (3%)
Query: 480 AKLRDFLVELGNDGKILGIQVCAYKDGEVIIDTSAGMLGRYDPRPVQPDSLFPVFSVTKG 539
+ L F+ + + K G V KDGEV++ + G P+ D+ P+ SV+K
Sbjct: 5 SALEAFVRHIPQNYKGPGGVVAVVKDGEVVLQHAWGFADLRTRTPMTLDTRMPICSVSKQ 64
Query: 540 ITAGMLHWLVDNGKLKLEENIANIWPEFKSNGKDLIKVHHVLNHTSGLHNVSV--DLSSE 597
T +L V + L++ + +F+ + V + N+ SGL + L
Sbjct: 65 FTCAVLLDAVGEPE-LLDDALEAYLDKFE---DERPAVRDLCNNQSGLRDYWALSVLCGA 120
Query: 598 NPLLICDWDECLNRIALSAPETEPGQEQLYHYLSFGWLCGGIIERASGKKFQEILEEGII 657
+P + + + + + + +IE +G+ +IL E I
Sbjct: 121 DPEGVFLPAQAQSLLRRLKTTHFEPGSHYSYCNGNFRILADLIEAHTGRTLVDILSERIF 180
Query: 658 QP 659
P
Sbjct: 181 AP 182
|
| >d1yqsa1 e.3.1.1 (A:3-347) D-ala carboxypeptidase/transpeptidase {Streptomyces sp., R61 [TaxId: 1931]} Length = 345 | Back information, alignment and structure |
|---|
class: Multi-domain proteins (alpha and beta) fold: beta-lactamase/transpeptidase-like superfamily: beta-lactamase/transpeptidase-like family: beta-Lactamase/D-ala carboxypeptidase domain: D-ala carboxypeptidase/transpeptidase species: Streptomyces sp., R61 [TaxId: 1931]
Score = 74.8 bits (182), Expect = 8e-15
Identities = 40/165 (24%), Positives = 64/165 (38%), Gaps = 11/165 (6%)
Query: 479 EAKLRDFLVELGNDGKILGIQVCAYKDGEVIIDTSAGMLGRYDPRPVQPDSLFPVFSVTK 538
+ L+ L + G G V +G I S G+ R R + F V SVTK
Sbjct: 6 DTGLQAVLHTALSQG-APGAMVRVDDNGT-IHQLSEGVADRATGRAITTTDRFRVGSVTK 63
Query: 539 GITAGMLHWLVDNGKLKLEENIANIWPEFKSNGKDLIKVHHVLNHTSGLHNVSVDLSSE- 597
+A +L LVD GKL L+ ++ P D I V V++H SGL++ + D+ ++
Sbjct: 64 SFSAVVLLQLVDEGKLDLDASVNTYLPGL--LPDDRITVRQVMSHRSGLYDYTNDMFAQT 121
Query: 598 ------NPLLICDWDECLNRIALSAPETEPGQEQLYHYLSFGWLC 636
+ + + + PG Y +F
Sbjct: 122 VPGFESVRNKVFSYQDLITLSLKHGVTNAPGAAYSYSNTNFVVAG 166
|
Homologous Domains Detected by HHsearch 
Original result of HHsearch against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 977 | |||
| d2drwa1 | 362 | D-Amino acid amidase DaaA {Ochrobactrum anthropi [ | 100.0 | |
| d1yqsa1 | 345 | D-ala carboxypeptidase/transpeptidase {Streptomyce | 100.0 | |
| d2hdsa1 | 358 | AMPC beta-Lactamase, class C {Escherichia coli, ce | 100.0 | |
| d1onha_ | 363 | AMPC beta-Lactamase, class C {Enterobacter cloacae | 100.0 | |
| d1ci9a_ | 377 | Esterase EstB {Burkholderia gladioli [TaxId: 28095 | 100.0 | |
| d1ei5a3 | 333 | D-aminopeptidase, N-terminal domain {Ochrobactrum | 100.0 | |
| d2dcfa1 | 388 | 6-aminohexanoate-dimer hydrolase NylC {Flavobacter | 100.0 | |
| d1zara2 | 191 | Rio2 serine protein kinase C-terminal domain {Arch | 99.75 | |
| d2jfla1 | 288 | STE20-like serine/threonine-protein kinase, SLK {H | 99.69 | |
| d1yhwa1 | 293 | pak1 {Human (Homo sapiens) [TaxId: 9606]} | 99.68 | |
| d1koba_ | 352 | Twitchin, kinase domain {California sea hare (Aply | 99.66 | |
| d1sm2a_ | 263 | Tyrosine-protein kinase Itk/Tsk {Human (Homo sapie | 99.65 | |
| d1tkia_ | 321 | Titin, kinase domain {Human (Homo sapiens) [TaxId: | 99.65 | |
| d1qpca_ | 272 | Lymphocyte kinase (lck) {Human (Homo sapiens) [Tax | 99.64 | |
| d1koaa2 | 350 | Twitchin, kinase domain {Caenorhabditis elegans, p | 99.64 | |
| d2j4za1 | 263 | Aurora-related kinase 1 (aurora-2) {Human (Homo sa | 99.64 | |
| d1nvra_ | 271 | Cell cycle checkpoint kinase chk1 {Human (Homo sap | 99.63 | |
| d1xbba_ | 277 | Tyrosine-protein kinase SYK {Human (Homo sapiens) | 99.63 | |
| d1opja_ | 287 | Abelsone tyrosine kinase (abl) {Mouse (Mus musculu | 99.62 | |
| d1u59a_ | 285 | Tyrosine-protein kinase ZAP-70 {Human (Homo sapien | 99.62 | |
| d1phka_ | 277 | gamma-subunit of glycogen phosphorylase kinase (Ph | 99.62 | |
| d1jpaa_ | 299 | ephb2 receptor tyrosine kinase {Mouse (Mus musculu | 99.61 | |
| d1uwha_ | 276 | B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]} | 99.61 | |
| d1u5ra_ | 309 | Serine/threonine protein kinase TAO2 {Rat (Rattus | 99.61 | |
| d1fmka3 | 285 | c-src tyrosine kinase {Human (Homo sapiens) [TaxId | 99.61 | |
| d1s9ja_ | 322 | Dual specificity mitogen-activated protein kinase | 99.61 | |
| d1a06a_ | 307 | Calmodulin-dependent protein kinase {Rat (Rattus n | 99.61 | |
| d1uu3a_ | 288 | 3-phosphoinositide dependent protein kinase-1 Pdk1 | 99.6 | |
| d1k2pa_ | 258 | Bruton's tyrosine kinase (Btk) {Human (Homo sapien | 99.59 | |
| d1t4ha_ | 270 | Protein kinase wnk1 {Human (Homo sapiens) [TaxId: | 99.59 | |
| d1fota_ | 316 | cAMP-dependent PK, catalytic subunit {Baker's yeas | 99.58 | |
| d2java1 | 269 | Serine/threonine-protein kinase Nek2 {Human (Homo | 99.58 | |
| d1mqba_ | 283 | epha2 receptor tyrosine kinase {Human (Homo sapien | 99.57 | |
| d1omwa3 | 364 | G-protein coupled receptor kinase 2 {Cow (Bos taur | 99.57 | |
| d1o6la_ | 337 | Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9 | 99.56 | |
| d1csna_ | 293 | Casein kinase-1, CK1 {Fission yeast (Schizosacchar | 99.55 | |
| d3bqca1 | 328 | Protein kinase CK2, alpha subunit {Rattus norvegic | 99.55 | |
| d1jksa_ | 293 | Death-associated protein kinase, Dap {Human (Homo | 99.55 | |
| d1rdqe_ | 350 | cAMP-dependent PK, catalytic subunit {Mouse (Mus m | 99.55 | |
| d1ua2a_ | 299 | Cell division protein kinase 7, CDK7 {Human (Homo | 99.55 | |
| d1o6ya_ | 277 | Mycobacterial protein kinase PknB, catalytic domai | 99.55 | |
| d1rjba_ | 325 | Fl cytokine receptor {Human (Homo sapiens) [TaxId: | 99.53 | |
| d1mp8a_ | 273 | Focal adhesion kinase 1 (fak) {Human (Homo sapiens | 99.53 | |
| d1ywna1 | 299 | Vascular endothelial growth factor receptor 2 (kdr | 99.53 | |
| d1gz8a_ | 298 | Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [T | 99.52 | |
| d1xwsa_ | 273 | Proto-oncogene serine/threonine-protein kinase Pim | 99.51 | |
| d1ckia_ | 299 | Casein kinase-1, CK1 {Rat (Rattus norvegicus) [Tax | 99.51 | |
| d2ozaa1 | 335 | MAP kinase activated protein kinase 2, mapkap2 {Hu | 99.5 | |
| d1xjda_ | 320 | Protein kinase C, theta type {Human (Homo sapiens) | 99.5 | |
| d1pmea_ | 345 | MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606 | 99.5 | |
| d1ob3a_ | 286 | Cyclin-dependent PK, CDK2 {(Plasmodium falciparum) | 99.5 | |
| d1u46a_ | 273 | Activated CDC42 kinase 1, ACK1 {Human (Homo sapien | 99.49 | |
| d1q5ka_ | 350 | Glycogen synthase kinase-3 beta (Gsk3b) {Human (Ho | 99.48 | |
| d1xkka_ | 317 | EGF receptor tyrosine kinase, Erbb-1 {Human (Homo | 99.47 | |
| d1cm8a_ | 346 | MAP kinase p38-gamma {Human (Homo sapiens) [TaxId: | 99.46 | |
| d1r0pa_ | 311 | Hepatocyte growth factor receptor, c-MET {Human (H | 99.46 | |
| d1lufa_ | 301 | Musk tyrosine kinase {Rat (Rattus norvegicus) [Tax | 99.46 | |
| d1p4oa_ | 308 | Insulin-like growth factor 1 receptor {Human (Homo | 99.46 | |
| d2gfsa1 | 348 | MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606] | 99.45 | |
| d1vjya_ | 303 | Type I TGF-beta receptor R4 {Human (Homo sapiens) | 99.44 | |
| d1t46a_ | 311 | c-KIT receptor {Human (Homo sapiens) [TaxId: 9606] | 99.44 | |
| d1vzoa_ | 322 | Ribosomal protein S6 kinase alpha 5, Msk1 {Human ( | 99.44 | |
| d1fgka_ | 299 | Fibroblast growth factor receptor 1 {Human (Homo s | 99.43 | |
| d1unla_ | 292 | Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [T | 99.42 | |
| d1blxa_ | 305 | Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [T | 99.42 | |
| d1byga_ | 262 | Carboxyl-terminal src kinase (csk) {Human (Homo sa | 99.42 | |
| d1fvra_ | 309 | Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]} | 99.4 | |
| d3blha1 | 318 | Cell division protein kinase 9, CDK9 {Human (Homo | 99.37 | |
| d2b1pa1 | 355 | c-jun N-terminal kinase (jnk3s) {Human (Homo sapie | 99.33 | |
| d1q8ya_ | 362 | Sky1p {Baker's yeast (Saccharomyces cerevisiae) [T | 99.08 | |
| d1nd4a_ | 255 | Aminoglycoside 3'-phosphotransferase IIa (Kanamyci | 98.6 | |
| d1j7la_ | 263 | Type IIIa 3',5"-aminoglycoside phosphotransferase | 98.28 | |
| d1zyla1 | 325 | RdoA {Escherichia coli [TaxId: 562]} | 98.25 | |
| d2pula1 | 392 | Methylthioribose kinase MtnK {Bacillus subtilis [T | 98.04 | |
| d1tvfa2 | 301 | Pencillin binding protein 4 (PbpD), N-terminal dom | 97.88 | |
| d1es5a_ | 260 | D-ala carboxypeptidase/transpeptidase {Streptomyce | 97.59 | |
| d1iysa_ | 261 | beta-Lactamase, class A {Escherichia coli, TOHO-1 | 97.55 | |
| d3beca2 | 259 | Penicillin-binding protein 5, N-terminal domain {E | 97.44 | |
| d2ppqa1 | 316 | Homoserine kinase ThrB {Agrobacterium tumefaciens | 97.29 | |
| d1e25a_ | 278 | beta-Lactamase, class A {Pseudomonas aeruginosa, P | 97.28 | |
| d1o7ea_ | 267 | beta-Lactamase, class A {Stenotrophomonas maltophi | 97.26 | |
| d1xp4a2 | 269 | D,D-carboxypeptidase DacA, N-terminal domain {Stre | 97.15 | |
| d1bsga_ | 266 | beta-Lactamase, class A {Streptomyces albus G [Tax | 97.15 | |
| d1n9ba_ | 265 | beta-Lactamase, class A {Klebsiella pneumoniae, SH | 97.14 | |
| d2cc1a1 | 262 | beta-Lactamase, class A {Mycobacterium fortuitum [ | 97.11 | |
| d1nw1a_ | 395 | Choline kinase {Caenorhabditis elegans [TaxId: 623 | 97.07 | |
| d1djaa_ | 258 | beta-Lactamase, class A {Staphylococcus aureus [Ta | 97.05 | |
| d1m40a_ | 263 | beta-Lactamase, class A {Escherichia coli, TEM-1 [ | 97.05 | |
| d1g6aa_ | 266 | beta-Lactamase, class A {Pseudomonas aeruginosa, P | 96.77 | |
| d1i2sa_ | 255 | beta-Lactamase, class A {Bacillus licheniformis [T | 96.07 | |
| d1buea_ | 265 | beta-Lactamase, class A {Enterobacter cloacae, NMC | 94.63 | |
| d1pyya4 | 368 | Penicillin-binding protein 2x (pbp-2x), transpepti | 92.48 | |
| d2olua2 | 400 | Penicillin-binding protein 2, PBP2 {Staphylococcus | 86.6 |
| >d2drwa1 e.3.1.1 (A:2-363) D-Amino acid amidase DaaA {Ochrobactrum anthropi [TaxId: 529]} | Back information, alignment and structure |
|---|
class: Multi-domain proteins (alpha and beta) fold: beta-lactamase/transpeptidase-like superfamily: beta-lactamase/transpeptidase-like family: beta-Lactamase/D-ala carboxypeptidase domain: D-Amino acid amidase DaaA species: Ochrobactrum anthropi [TaxId: 529]
Probab=100.00 E-value=2.2e-48 Score=440.66 Aligned_cols=264 Identities=20% Similarity=0.263 Sum_probs=209.2
Q ss_pred hHHHHHHHHHHHhccCCCccceEEEEEecCeeEEEeeccccCCCCCCCCCCCCcceeecchHHHHHHHHHHHHHCCCcCc
Q 002031 477 DVEAKLRDFLVELGNDGKILGIQVCAYKDGEVIIDTSAGMLGRYDPRPVQPDSLFPVFSVTKGITAGMLHWLVDNGKLKL 556 (977)
Q Consensus 477 ~~~~~l~~~l~~~~~~~~~pG~svaVv~~g~~v~~~~~G~~~~~~~~~~t~~T~f~i~SiTK~~ta~~v~~lv~~G~l~l 556 (977)
++..+++.++++.++. ++||++|+|+++|++++..++|++|.+.+.|++++|+|+|||+||+|||+++++|+|+|+|+|
T Consensus 2 ~~~~~i~~~~~~~~~~-g~~g~~v~v~~~g~~v~~~~~G~ad~~~~~p~t~dt~f~i~SvsK~~ta~~i~~lve~G~l~l 80 (362)
T d2drwa1 2 DLNNAIQGILDDHVAR-GVVGVSLALCLPGEETSLYQSGYADKFNKMPMTGDHLFRIASCTKSFIATGLHLLVQDGTVDL 80 (362)
T ss_dssp HHHHHHHHHHHHHHTT-TCCEEEEEEECTTSCEEEEEEEEEETTTTEECCTTCBEECGGGHHHHHHHHHHHHHHTTSCCT
T ss_pred cHHHHHHHHHHHHHHc-CCCeEEEEEEECCEEEEEEeEEEeccccCCCCCCCCeEEeeehHHHHHHHHHHHHHHcCCCCC
Confidence 5678899999999874 589999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCchhhhccccccCCCCCCcHHHHhcCcCCCCCCcCCCCCCCCcCCCCHHHHHHHHHccCCCCCCCCceecccCcHHHHH
Q 002031 557 EENIANIWPEFKSNGKDLIKVHHVLNHTSGLHNVSVDLSSENPLLICDWDECLNRIALSAPETEPGQEQLYHYLSFGWLC 636 (977)
Q Consensus 557 d~~v~~ylP~~~~~~~~~iTir~LLsHtSGl~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~pG~~~~Ysn~~~~~ll 636 (977)
||||.+|+|++.. .++|||+|||+|||||+++...... ........+++++.+...++.++||+.|.|||.||. ||
T Consensus 81 dd~v~~ylp~~~~--~~~iTi~~LL~htSGl~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~pg~~~~Ysn~~~~-ll 156 (362)
T d2drwa1 81 DEPITRWFPDLPK--AAQMPVRILLNHRSGLPDFETSMPM-ISDKSWTAQEIVDFSFRHGVQKEPWHGMEYSNTGYV-LA 156 (362)
T ss_dssp TSBGGGTCTTSTT--GGGCBGGGGTTTCSCCCCCTTTSBS-SCCCCCCHHHHHHHHHHHSCCCCTTSSCCCCSHHHH-HH
T ss_pred Cceeeeeeccccc--cccccccccccccCCCCcccccccc-ccccccchhHHHHhhhccCccccccceeccccccee-cc
Confidence 9999999999975 3579999999999999986544332 223356788999999999999999999999999998 99
Q ss_pred HHHHHHHhCCCHHHHHHHHcccccCCCCccCCCCCCCcccCcceecccCCccccccCCCCCCCCCCCCCCCcchhhhhhh
Q 002031 637 GGIIERASGKKFQEILEEGIIQPLSIDGELYIGIPPGVESRLASLTIDTDDLNKVSGINNRPDLRLPSSFQPDKISQLAA 716 (977)
Q Consensus 637 g~iiE~vtG~~~~~~l~~~if~PLGm~~t~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~p~~~~p~~~~~~~~~~~~~ 716 (977)
|.|||+++|++|+++++++||+||||++|.|.........+.+.+|.........+.+..... ..
T Consensus 157 g~iie~~tg~~~~~~~~e~i~~PLgm~~T~~~~~~~~~~~~~a~~y~~~~~~~~~~~~~~~~~---------------~~ 221 (362)
T d2drwa1 157 GMIIAHETGKPYSDHLRSRIFAPLGMKDTWVGTHETFPIEREARGYMHAAADDENPQWDVSGA---------------GD 221 (362)
T ss_dssp HHHHHHHHTSCHHHHHHHHTHHHHTCCSCEETTTCCCCGGGBCCCEEECBTTCCSCSSBCTTC---------------CC
T ss_pred cchhhhccCcchhhhhHHHHHhccCCccccccCccccccccccceeecccccccccccccccc---------------cC
Confidence 999999999999999999999999999997644444445566666643322111111000000 00
Q ss_pred cccccccch--hccccccCccceecCHHHHHHHHHHHHcCCCCCCC
Q 002031 717 ITPAVFNML--NIRRAIIPAANGHCSARALARYYAALADGGVVPPP 760 (977)
Q Consensus 717 ~~~~~~~~~--~~~~~~~~agG~~sTa~Dlar~~~~ll~~g~~~~~ 760 (977)
+........ .......++||+++|++||+||++++++++.++++
T Consensus 222 ~~~~~~~~~~~~~~~~~~~aGgl~sta~Dla~~~~~ll~~~~l~~~ 267 (362)
T d2drwa1 222 PVDGVWDSTEWFPLSGANAAGDMVSTPRDIVKFLNALFDGRILDQK 267 (362)
T ss_dssp CBTTEEECTTTSCHHHHGGGTCEEECHHHHHHHHHHHHTTSSSCHH
T ss_pred ccccccccccccccccccccCceEcCHHHHHHHHHHHhCCCCCCHH
Confidence 000011111 11233458899999999999999999998876654
|
| >d1yqsa1 e.3.1.1 (A:3-347) D-ala carboxypeptidase/transpeptidase {Streptomyces sp., R61 [TaxId: 1931]} | Back information, alignment and structure |
|---|
class: Multi-domain proteins (alpha and beta) fold: beta-lactamase/transpeptidase-like superfamily: beta-lactamase/transpeptidase-like family: beta-Lactamase/D-ala carboxypeptidase domain: D-ala carboxypeptidase/transpeptidase species: Streptomyces sp., R61 [TaxId: 1931]
Probab=100.00 E-value=6.5e-48 Score=433.86 Aligned_cols=329 Identities=21% Similarity=0.307 Sum_probs=254.6
Q ss_pred HHHHHHHHHHhccCCCccceEEEEEecCeeEEEeeccccCCCCCCCCCCCCcceeecchHHHHHHHHHHHHHCCCcCcCC
Q 002031 479 EAKLRDFLVELGNDGKILGIQVCAYKDGEVIIDTSAGMLGRYDPRPVQPDSLFPVFSVTKGITAGMLHWLVDNGKLKLEE 558 (977)
Q Consensus 479 ~~~l~~~l~~~~~~~~~pG~svaVv~~g~~v~~~~~G~~~~~~~~~~t~~T~f~i~SiTK~~ta~~v~~lv~~G~l~ld~ 558 (977)
...++.++++.+++ .+||++|+|+++|+ ++..+||+++...+.|+|++|+|+|||+||+|||+++++|+|+|+|+||+
T Consensus 6 ~~~l~~~~~~~~~~-~~pG~~v~v~~~g~-~~~~~~G~~d~~~~~~~t~~t~f~i~SvsK~~ta~~i~~lv~~G~l~ldd 83 (345)
T d1yqsa1 6 DTGLQAVLHTALSQ-GAPGAMVRVDDNGT-IHQLSEGVADRATGRAITTTDRFRVGSVTKSFSAVVLLQLVDEGKLDLDA 83 (345)
T ss_dssp HHHHHHHHHHHHHT-TCSEEEEEEEETTE-EEEEEEEBSCTTTCCBCCTTCBEECGGGHHHHHHHHHHHHHHTTSCCTTS
T ss_pred hHHHHHHHHHHHHC-CCCeEEEEEEECCE-EEEEeEEEEeccCCCCCCCCCEEEchhhhHHHHHHHHHHHHHhhcccccc
Confidence 45678888887775 49999999999987 57789999999999999999999999999999999999999999999999
Q ss_pred chhhhccccccCCCCCCcHHHHhcCcCCCCCCcCCCCC-------CCCcCCCCHHHHHHHHHccCCCCCCCCceecccCc
Q 002031 559 NIANIWPEFKSNGKDLIKVHHVLNHTSGLHNVSVDLSS-------ENPLLICDWDECLNRIALSAPETEPGQEQLYHYLS 631 (977)
Q Consensus 559 ~v~~ylP~~~~~~~~~iTir~LLsHtSGl~~~~~~~~~-------~~~~~~~~~~~~~~~l~~~~~~~~pG~~~~Ysn~~ 631 (977)
||++|||++... ++|||+|||+||||++++...... .......+.+++++.+...++.++||+.|.|||.|
T Consensus 84 ~v~~~lp~~~~~--~~iTi~~LL~htSGl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pG~~~~Ysn~~ 161 (345)
T d1yqsa1 84 SVNTYLPGLLPD--DRITVRQVMSHRSGLYDYTNDMFAQTVPGFESVRNKVFSYQDLITLSLKHGVTNAPGAAYSYSNTN 161 (345)
T ss_dssp BHHHHSTTCSSC--TTCBHHHHHTTCSCCCCTHHHHTSSHHHHHHHHTTCCCCHHHHHHHHHTSCCSSSTTSCCCCCHHH
T ss_pred chhhcccccCCc--ceEEeeeeccccCCCCcccccchhhccccccccccccCCHHHHHHHHHhcCccCCCCcccccCCcc
Confidence 999999999653 579999999999999976432211 11123467889999999999999999999999999
Q ss_pred HHHHHHHHHHHHhCCCHHHHHHHHcccccCCCCccCCCCCCCcccCcceecccCCccccccCCCCCCCCCCCCCCCcchh
Q 002031 632 FGWLCGGIIERASGKKFQEILEEGIIQPLSIDGELYIGIPPGVESRLASLTIDTDDLNKVSGINNRPDLRLPSSFQPDKI 711 (977)
Q Consensus 632 ~~~llg~iiE~vtG~~~~~~l~~~if~PLGm~~t~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~p~~~~p~~~~~~~~ 711 (977)
|. |||.|||++||++|+++++++||+||||++|.|...........+..|.......... .
T Consensus 162 ~~-lLg~iie~vtg~~~~~~~~e~i~~PLgm~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~---~--------------- 222 (345)
T d1yqsa1 162 FV-VAGMLIEKLTGHSVATEYQNRIFTPLNLTDTFYVHPDTVIPGTHANGYLTPDEAGGAL---V--------------- 222 (345)
T ss_dssp HH-HHHHHHHHHHSSCHHHHHHHHTTTTTTCTTCBCCTTCCCCCSSBCCCEECCSSTTCCC---E---------------
T ss_pred cc-ccchhhhhccccchHHHHHHHHhhccCCcceeccCchhhhcccccccccccccccccc---c---------------
Confidence 98 9999999999999999999999999999999776544444445554443222111000 0
Q ss_pred hhhhhcccccccchhccccccCccceecCHHHHHHHHHHHHcCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccccchh
Q 002031 712 SQLAAITPAVFNMLNIRRAIIPAANGHCSARALARYYAALADGGVVPPPHSRLSKPPLGSHPHIPKFPSHETSKKQKGTK 791 (977)
Q Consensus 712 ~~~~~~~~~~~~~~~~~~~~~~agG~~sTa~Dlar~~~~ll~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 791 (977)
...........++||+++|++||+||+++++++..++.
T Consensus 223 ----------~~~~~~~~~~~~aGgl~st~~Dla~~~~~l~~~~~l~~-------------------------------- 260 (345)
T d1yqsa1 223 ----------DSTEQTVSWAQSAGAVISSTQDLDTFFSALMSGQLMSA-------------------------------- 260 (345)
T ss_dssp ----------ECCCCCCTTTGGGTCCEECHHHHHHHHHHHHTTCSSCH--------------------------------
T ss_pred ----------ccccccccccCCCcccccCHHHHHHHHHHhhcCCCCCH--------------------------------
Confidence 00000112335889999999999999999998765543
Q ss_pred HHHHHHHhhccCCCCCCcccccCCCCCccccccCcchhhhhhhcccCCCCCCCccCCCCCCCCCCcccccccCCCccccc
Q 002031 792 KELLAALKNKTNNSEHGHKYTKDLEGGSHIRTASGDTYARLINIETSSSNTSTTDSISNTDEPQSSNVRKIFNNPRIHDA 871 (977)
Q Consensus 792 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 871 (977)
+.+++|.. |..
T Consensus 261 -~~~~~~~~----------------------------~~~---------------------------------------- 271 (345)
T d1yqsa1 261 -AQLAQMQQ----------------------------WTT---------------------------------------- 271 (345)
T ss_dssp -HHHHHHTC----------------------------CEE----------------------------------------
T ss_pred -HHHHHHhh----------------------------ccc----------------------------------------
Confidence 35666620 000
Q ss_pred ccCCCCCCCCCCCCCccccceeecCCCCCCccccccCC-ccCcc--eeeecCCCeEEEEEeccCCCCCChHHHHHHHHHH
Q 002031 872 FLGVGDYGDLALPNGRFGLGFKRYNTRDGSYIGFGHSG-MGGST--GFCDVNNRFAIAVTLNKMSFGATTGRIIHFVCSE 948 (977)
Q Consensus 872 ~~~~g~~~~~~~~~~~yGlG~~~~~~~~~~~~~~gH~G-~~G~~--~~~~P~~~~~ivvl~N~~~~~~~~~~~~~~v~~~ 948 (977)
.....+||+||++... ..+..+++|+| .+|+. ++++|+++++||+++|+....+..+.+.+.+.++
T Consensus 272 ----------~~~~~~yG~G~~~~~~-~~g~~~~~H~G~~~G~~s~~~~~p~~~~~iv~l~N~~~~~~~~~~~~~~l~~~ 340 (345)
T d1yqsa1 272 ----------VNSTQGYGLGLRRRDL-SCGISVYGHTGTVQGYYTYAFASKDGKRSVTALANTSNNVNVLNTMARTLESA 340 (345)
T ss_dssp ----------EETTEEECSSCEEEEC-TTSCEEEEEEEEETTEEEEEEECTTSSEEEEEEESEESCHHHHHHHHHHHHHH
T ss_pred ----------CCCCCceeEEEEeecc-CCCceEEEecCccCCceEEEEEEEcCCEEEEEEEeCCCChHHHHHHHHHHHHH
Confidence 0012479999998653 33456799999 77755 4999999999999999876656677888888887
Q ss_pred h-CCC
Q 002031 949 L-NLP 952 (977)
Q Consensus 949 l-~~~ 952 (977)
+ +.|
T Consensus 341 ~~g~p 345 (345)
T d1yqsa1 341 FCGKP 345 (345)
T ss_dssp HTCCC
T ss_pred hcCCC
Confidence 7 443
|
| >d2hdsa1 e.3.1.1 (A:4-361) AMPC beta-Lactamase, class C {Escherichia coli, cephalosporinase [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Multi-domain proteins (alpha and beta) fold: beta-lactamase/transpeptidase-like superfamily: beta-lactamase/transpeptidase-like family: beta-Lactamase/D-ala carboxypeptidase domain: AMPC beta-Lactamase, class C species: Escherichia coli, cephalosporinase [TaxId: 562]
Probab=100.00 E-value=1.9e-48 Score=440.42 Aligned_cols=241 Identities=21% Similarity=0.279 Sum_probs=207.7
Q ss_pred chHHHHHHHHHHHhccCCCccceEEEEEecCeeEEEeeccccCCCCCCCCCCCCcceeecchHHHHHHHHHHHHHCCCcC
Q 002031 476 SDVEAKLRDFLVELGNDGKILGIQVCAYKDGEVIIDTSAGMLGRYDPRPVQPDSLFPVFSVTKGITAGMLHWLVDNGKLK 555 (977)
Q Consensus 476 ~~~~~~l~~~l~~~~~~~~~pG~svaVv~~g~~v~~~~~G~~~~~~~~~~t~~T~f~i~SiTK~~ta~~v~~lv~~G~l~ 555 (977)
+.+.+.+++.++++++++.+||++|+|+++|++++. +||+++..++.|+++||+|+|||+||+|||+++++|+|+|+|+
T Consensus 3 ~~~~~~v~~~i~~~~~~~~ipG~~v~v~~~g~~~~~-~~G~~~~~~~~~~~~dt~f~iaS~tK~~ta~~i~~lv~~G~l~ 81 (358)
T d2hdsa1 3 QQINDIVHRTITPLIEQQKIPGMAVAVIYQGKPYYF-TWGYADIAKKQPVTQQTLFELGSVSKTFTGVLGGDAIARGEIK 81 (358)
T ss_dssp HHHHHHHHHHHHHHHHHHTCSEEEEEEEETTEEEEE-EEEEEETTTTEECCTTCBEECGGGHHHHHHHHHHHHHHTTSCC
T ss_pred HHHHHHHHHHHHHHHHhCCCCeEEEEEEECCEEEEE-eEEeeccccCCCCCCCCEEeccchHHHHHHHHHHHHHhcCCcc
Confidence 466788999999999999999999999999999985 6899999999999999999999999999999999999999999
Q ss_pred cCCchhhhccccccCCCCCCcHHHHhcCcCCCCCCcCCCCCCCCcCCCCHHHHHHHHHccCCCCCCCCceecccCcHHHH
Q 002031 556 LEENIANIWPEFKSNGKDLIKVHHVLNHTSGLHNVSVDLSSENPLLICDWDECLNRIALSAPETEPGQEQLYHYLSFGWL 635 (977)
Q Consensus 556 ld~~v~~ylP~~~~~~~~~iTir~LLsHtSGl~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~pG~~~~Ysn~~~~~l 635 (977)
||+||++|+|++....++.|||||||+||||+..+. .+....+.+++++.+...++.++||+.|.|||.+|. |
T Consensus 82 ld~~v~~ylp~~~~~~~~~iTir~LLshtsG~~~~~------~~~~~~~~~~~~~~~~~~~~~~~pG~~~~Ysn~~~~-l 154 (358)
T d2hdsa1 82 LSDPTTKYWPELTAKQWNGITLLHLATYTAGGLPLQ------VPDEVKSSSDLLRFYQNWQPAWAPGTQRLYANSSIG-L 154 (358)
T ss_dssp TTSBHHHHCTTCCCGGGTTCBHHHHHHTCSSCCCSS------CCTTCCSHHHHHHHHHHCCCSSCTTSEECCCHHHHH-H
T ss_pred cchhhhhhcccccccccchhhhhhhcccCcCCCchh------hcccccccHHHHHHHhhCccccCCCceeEecccccc-c
Confidence 999999999999877788999999999999987642 233456889999999999999999999999999999 9
Q ss_pred HHHHHHHHhCCCHHHHHHHHcccccCCCCccCCCCCCCcccCcceecccCCccccccCCCCCCCCCCCCCCCcchhhhhh
Q 002031 636 CGGIIERASGKKFQEILEEGIIQPLSIDGELYIGIPPGVESRLASLTIDTDDLNKVSGINNRPDLRLPSSFQPDKISQLA 715 (977)
Q Consensus 636 lg~iiE~vtG~~~~~~l~~~if~PLGm~~t~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~p~~~~p~~~~~~~~~~~~ 715 (977)
||.|||++||++|+++++++||+||||++|.+ ..++....+.+.+|......... +
T Consensus 155 lg~iie~~tg~~~~~~~~~~i~~PLgm~~T~~-~~~~~~~~~~~~~~~~~~~~~~~------~----------------- 210 (358)
T d2hdsa1 155 FGALAVKPSGLSFEQAMQTRVFQPLKLNHTWI-NVPPAEEKNYAWGYREGKAVHVS------P----------------- 210 (358)
T ss_dssp HHHHHTGGGTSCHHHHHHHHTTTTTTCTTEES-SCCGGGGGGBCCEEETTEEECCC------C-----------------
T ss_pred cchhhhcccCCChhhhhhhHHHhhcCcccccC-CCChhHhcccccccccCcccccc------c-----------------
Confidence 99999999999999999999999999999865 34555555555555332211100 0
Q ss_pred hcccccccchhccccccCccceecCHHHHHHHHHHHHcCCCCCCC
Q 002031 716 AITPAVFNMLNIRRAIIPAANGHCSARALARYYAALADGGVVPPP 760 (977)
Q Consensus 716 ~~~~~~~~~~~~~~~~~~agG~~sTa~Dlar~~~~ll~~g~~~~~ 760 (977)
.....++||++||++||+||++++++++.++++
T Consensus 211 ------------~~~~~~aggl~st~~Dla~f~~~~l~~~~~~~~ 243 (358)
T d2hdsa1 211 ------------GALDAEAYGVKSTIEDMARWVQSNLKPLDINEK 243 (358)
T ss_dssp ------------CTTHHHHTCCEECHHHHHHHHHHHHCGGGCSSH
T ss_pred ------------ccccCCCcceecCHHHHHHHHHHHhCCCCCChH
Confidence 012237899999999999999999999988776
|
| >d1onha_ e.3.1.1 (A:) AMPC beta-Lactamase, class C {Enterobacter cloacae, P99, cephalosporinase [TaxId: 550]} | Back information, alignment and structure |
|---|
class: Multi-domain proteins (alpha and beta) fold: beta-lactamase/transpeptidase-like superfamily: beta-lactamase/transpeptidase-like family: beta-Lactamase/D-ala carboxypeptidase domain: AMPC beta-Lactamase, class C species: Enterobacter cloacae, P99, cephalosporinase [TaxId: 550]
Probab=100.00 E-value=4.5e-48 Score=438.30 Aligned_cols=244 Identities=19% Similarity=0.280 Sum_probs=209.3
Q ss_pred chHHHHHHHHHHHhccCCCccceEEEEEecCeeEEEeeccccCCCCCCCCCCCCcceeecchHHHHHHHHHHHHHCCCcC
Q 002031 476 SDVEAKLRDFLVELGNDGKILGIQVCAYKDGEVIIDTSAGMLGRYDPRPVQPDSLFPVFSVTKGITAGMLHWLVDNGKLK 555 (977)
Q Consensus 476 ~~~~~~l~~~l~~~~~~~~~pG~svaVv~~g~~v~~~~~G~~~~~~~~~~t~~T~f~i~SiTK~~ta~~v~~lv~~G~l~ 555 (977)
.++.+.+++.++++++++.+||++|+|+++|++++. .||+++..++.|+++||+|+|||+||+|||+++++|+|+|+|+
T Consensus 5 ~~l~~~v~~~i~~~~~~~~~pG~~v~V~~~g~~~~~-~~G~~~~~~~~p~~~dT~f~iaSitK~~ta~~i~~L~e~G~l~ 83 (363)
T d1onha_ 5 KQLAEVVANTVTPLMKAQSVPGMAVAVIYQGKPHYY-TFGKADIAANKPVTPQTLFELGSISKTFTGVLGGDAIARGEIS 83 (363)
T ss_dssp HHHHHHHHHHHHHHHHHTTCSEEEEEEEETTEEEEE-EEEEEETTTTEECCTTCBEECGGGHHHHHHHHHHHHHHHTSCC
T ss_pred HHHHHHHHHHHHHHHHhCCCCeEEEEEEECCEEEEE-eEEecccCCCCCCCCCCEEEeeehHHHHHHHHHHHHHhcCcce
Confidence 366777899999999999999999999999999985 7899999999999999999999999999999999999999999
Q ss_pred cCCchhhhccccccCCCCCCcHHHHhcCcCCCCCCcCCCCCCCCcCCCCHHHHHHHHHccCCCCCCCCceecccCcHHHH
Q 002031 556 LEENIANIWPEFKSNGKDLIKVHHVLNHTSGLHNVSVDLSSENPLLICDWDECLNRIALSAPETEPGQEQLYHYLSFGWL 635 (977)
Q Consensus 556 ld~~v~~ylP~~~~~~~~~iTir~LLsHtSGl~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~pG~~~~Ysn~~~~~l 635 (977)
|||||++|+|+|...+++.|||+|||+||||+..+. .+....+.+++++.+...++.++||+.|.|||.||. |
T Consensus 84 lddpv~~ylp~~~~~~~~~ITi~~LL~HtSGl~~~~------~~~~~~~~~~~~~~~~~~~~~~~PG~~~~Ysn~~~~-l 156 (363)
T d1onha_ 84 LDDPVTRYWPQLTGKQWQGIRMLDLATYTAGGLPLQ------VPDEVTDNASLLRFYQNWQPQWKPGTTRLYANASIG-L 156 (363)
T ss_dssp TTSBGGGTCTTCCCGGGTTCBHHHHHHTCSSCCCSS------CCTTCCSHHHHHHHHHHCCCSSCTTSEECCCHHHHH-H
T ss_pred eeeccchhhhhcccccccccchhhHhhccccCcccc------CccccCCHHHHHHHHHHhhhhcCCceeeecccccee-h
Confidence 999999999999887778999999999999976542 223356889999999999999999999999999998 9
Q ss_pred HHHHHHHHhCCCHHHHHHHHcccccCCCCccCCCCCCCcccCcceecccCCccccccCCCCCCCCCCCCCCCcchhhhhh
Q 002031 636 CGGIIERASGKKFQEILEEGIIQPLSIDGELYIGIPPGVESRLASLTIDTDDLNKVSGINNRPDLRLPSSFQPDKISQLA 715 (977)
Q Consensus 636 lg~iiE~vtG~~~~~~l~~~if~PLGm~~t~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~p~~~~p~~~~~~~~~~~~ 715 (977)
||.|||+++|++|++|++++||+||||++|++ ..+.....+.+.+|.+........ ..|
T Consensus 157 lg~iie~~tg~~~~~~~~e~i~~PLgm~~t~~-~~~~~~~~~~a~~~~~~~~~~~~~---~~~----------------- 215 (363)
T d1onha_ 157 FGALAVKPSGMPYEQAMTTRVLKPLKLDHTWI-NVPKAEEAHYAWGYRDGKAVRAVR---VSP----------------- 215 (363)
T ss_dssp HHHHHTGGGTSCHHHHHHHHTTTTTTCTTEES-SCCGGGGGGBCCEEETTEEECCCC---CCS-----------------
T ss_pred hhhhhhhhcCCChhhhhHHHHHhhcCcccccc-cCCcccccceeeeeecCCccccee---eec-----------------
Confidence 99999999999999999999999999999865 455566677777775332211111 000
Q ss_pred hcccccccchhccccccCccceecCHHHHHHHHHHHHcCCCCCCC
Q 002031 716 AITPAVFNMLNIRRAIIPAANGHCSARALARYYAALADGGVVPPP 760 (977)
Q Consensus 716 ~~~~~~~~~~~~~~~~~~agG~~sTa~Dlar~~~~ll~~g~~~~~ 760 (977)
. ....++||++||++||+||++++++++.+.+.
T Consensus 216 ----------~--~~~~~aggl~st~~Dla~~~~~~l~~~~~~~~ 248 (363)
T d1onha_ 216 ----------G--MLDAQAYGVKTNVQDMANWVMANMAPENVADA 248 (363)
T ss_dssp ----------S--TTHHHHHCCEECHHHHHHHHHHHHCGGGCCSH
T ss_pred ----------c--cccccccceeeCHHHHHHHHHHhhcCCCCCch
Confidence 0 11237899999999999999999999887765
|
| >d1ci9a_ e.3.1.1 (A:) Esterase EstB {Burkholderia gladioli [TaxId: 28095]} | Back information, alignment and structure |
|---|
class: Multi-domain proteins (alpha and beta) fold: beta-lactamase/transpeptidase-like superfamily: beta-lactamase/transpeptidase-like family: beta-Lactamase/D-ala carboxypeptidase domain: Esterase EstB species: Burkholderia gladioli [TaxId: 28095]
Probab=100.00 E-value=3.9e-47 Score=432.57 Aligned_cols=270 Identities=25% Similarity=0.343 Sum_probs=205.0
Q ss_pred chHHHHHHHHHHHhccCCCccceEEEEEecCeeEEEeeccccCCCCCCCCCCCCcceeecchHHHHHHHHHHHHHCCCcC
Q 002031 476 SDVEAKLRDFLVELGNDGKILGIQVCAYKDGEVIIDTSAGMLGRYDPRPVQPDSLFPVFSVTKGITAGMLHWLVDNGKLK 555 (977)
Q Consensus 476 ~~~~~~l~~~l~~~~~~~~~pG~svaVv~~g~~v~~~~~G~~~~~~~~~~t~~T~f~i~SiTK~~ta~~v~~lv~~G~l~ 555 (977)
.++.+++++++++.++++.+||++++|+++|+++++++||+++...+.|++++|+|+|||+||+|||+++++|+|+|+|+
T Consensus 2 a~l~~~id~~~~~~~~~~~~pG~~~~V~~~g~~v~~~~~G~ad~~~~~~~~~~t~f~iaSvtK~~ta~~v~~Lve~G~l~ 81 (377)
T d1ci9a_ 2 ASLAARLDAVFDQALRERRLVGAVAIVARHGEILYRRAQGLADREAGRPMREDTLFRLASVTKPIVALAVLRLVARGELA 81 (377)
T ss_dssp HHHHHHHHHHHHHHHHTTSCSEEEEEEEETTEEEEEEEEEEEETTTTEECCTTCBEECGGGHHHHHHHHHHHHHHHTSSC
T ss_pred chHHHHHHHHHHHHHHhCCCCeEEEEEEECCEEEEEEeEEeeccccCCCCCCCCeEeeeehHHHHHHHHHHHHHHcCCcc
Confidence 35778999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCchhhhccccccC----CCCCCcHHHHhcCcCCCCCCcCCC----------CCCCCcCCCCHHHHHHHHHccCCCCCC
Q 002031 556 LEENIANIWPEFKSN----GKDLIKVHHVLNHTSGLHNVSVDL----------SSENPLLICDWDECLNRIALSAPETEP 621 (977)
Q Consensus 556 ld~~v~~ylP~~~~~----~~~~iTir~LLsHtSGl~~~~~~~----------~~~~~~~~~~~~~~~~~l~~~~~~~~p 621 (977)
|||||.+|||+|... .++.|||||||+||||++++.... .........+.++.++.+...++.++|
T Consensus 82 ldd~v~~ylP~~~~~~~~~~~~~ITi~~Ll~htsGl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P 161 (377)
T d1ci9a_ 82 LDAPVTRWLPEFRPRLADGSEPLVTIHHLLTHTSGLGYWLLEGAGSVYDRLGISDGIDLRDFDLDENLRRLASAPLSFAP 161 (377)
T ss_dssp TTSBGGGTCTTCCCBCTTSCCCCCBHHHHHHTCSSCCCHHHHCTTSHHHHHTCCCSSSCCSSCHHHHHHHHHHSBCSSCT
T ss_pred ccccchhhhhhhhcccccccCCceehhhcccccccccccccccchhhhhhhccccccccccCCHHHHHHHHhhCCCcCCC
Confidence 999999999998643 346799999999999999743211 011122346789999999999999999
Q ss_pred CCceecccCcHHHHHHHHHHHHhCCCHHHHHHHHcccccCCCCccCCCCCCCcccCcceecccCCccc-cccCCCCCCCC
Q 002031 622 GQEQLYHYLSFGWLCGGIIERASGKKFQEILEEGIIQPLSIDGELYIGIPPGVESRLASLTIDTDDLN-KVSGINNRPDL 700 (977)
Q Consensus 622 G~~~~Ysn~~~~~llg~iiE~vtG~~~~~~l~~~if~PLGm~~t~~~~~~~~~~~~~a~~~~~~~~~~-~~~~~~~~p~~ 700 (977)
|+.|.||| +|. +||.|||+++|++|++|++++||+||||++|+|... ...+.+..|....... ........+
T Consensus 162 G~~~~Ys~-~~~-lLg~iie~vtg~~~~~~~~e~i~~PLGm~~t~~~~~---~~~~~a~~~~~~~~~~~~~~~~~~~~-- 234 (377)
T d1ci9a_ 162 GSGWQYSL-ALD-VLGAVVERATGQPLAAAVDALVAQPLGMRDCGFVSA---EPERFAVPYHDGQPEPVRMRDGIEVP-- 234 (377)
T ss_dssp TSCCCCCT-HHH-HHHHHHHHHHTSCHHHHHHHHTHHHHTCCSCBSCCS---CGGGBCCCEECCSSSCEECCTTEEEE--
T ss_pred CceEeeCc-HHH-HHHHHHhhcccchhhhhhhHHHhhccCCccccccCC---hhhhhhccccccCCcccccccccccc--
Confidence 99999986 687 999999999999999999999999999999977432 2334555554322111 000000000
Q ss_pred CCCCCCCcchhhhhhhcccccccchhccccccCccceecCHHHHHHHHHHHHcCCCCCCC
Q 002031 701 RLPSSFQPDKISQLAAITPAVFNMLNIRRAIIPAANGHCSARALARYYAALADGGVVPPP 760 (977)
Q Consensus 701 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~agG~~sTa~Dlar~~~~ll~~g~~~~~ 760 (977)
.+...... ................++||++||++||+||+++|++++.+.++
T Consensus 235 -~~~~~~~~-------~~~~~~~~~~~~~~~~g~gGl~sta~Dlarf~~~l~~~~~~~~~ 286 (377)
T d1ci9a_ 235 -LPEGHGAA-------VRFAPSRVFEPGAYPSGGAGMYGSADDVLRALEAIRANPGFLPE 286 (377)
T ss_dssp -CCTTSCSE-------EEECGGGGGCTTSCCCTTTCCEECHHHHHHHHHHHHHCSSSSCH
T ss_pred -cccccccc-------cccCccccccccccccCCccccccHHHHHHHHHHhhhccCCCcH
Confidence 00000000 00000001112223456789999999999999999998876544
|
| >d1ei5a3 e.3.1.1 (A:3-335) D-aminopeptidase, N-terminal domain {Ochrobactrum anthropi [TaxId: 529]} | Back information, alignment and structure |
|---|
class: Multi-domain proteins (alpha and beta) fold: beta-lactamase/transpeptidase-like superfamily: beta-lactamase/transpeptidase-like family: beta-Lactamase/D-ala carboxypeptidase domain: D-aminopeptidase, N-terminal domain species: Ochrobactrum anthropi [TaxId: 529]
Probab=100.00 E-value=5.9e-47 Score=423.91 Aligned_cols=321 Identities=18% Similarity=0.213 Sum_probs=243.6
Q ss_pred HHHHHHHHHhccCCCccceEEEEEecCeeEEEeeccccCCCCCCCCCCCCcceeecchHHHHHHHHHHHHHCCCcCcCCc
Q 002031 480 AKLRDFLVELGNDGKILGIQVCAYKDGEVIIDTSAGMLGRYDPRPVQPDSLFPVFSVTKGITAGMLHWLVDNGKLKLEEN 559 (977)
Q Consensus 480 ~~l~~~l~~~~~~~~~pG~svaVv~~g~~v~~~~~G~~~~~~~~~~t~~T~f~i~SiTK~~ta~~v~~lv~~G~l~ld~~ 559 (977)
+++++++++.++++.+||++|+|+++|+++++++||+++...+.|++++|+|+|||+||+|||+++++|+|+|+| ||||
T Consensus 5 ~~l~~~~~~~~~~~~~PG~sv~V~~~g~~v~~~~~G~~d~~~~~~~~~dt~f~i~SvsK~~ta~~v~~lv~~G~l-ldd~ 83 (333)
T d1ei5a3 5 SALEAFVRHIPQNYKGPGGVVAVVKDGEVVLQHAWGFADLRTRTPMTLDTRMPICSVSKQFTCAVLLDAVGEPEL-LDDA 83 (333)
T ss_dssp HHHHHHHHTHHHHSCSSEEEEEEEETTEEEEEEEEEEEETTTTEECCTTCCEECGGGHHHHHHHHHHHHTCSGGG-GHHH
T ss_pred HHHHHHHHHHHHhCCCCcEEEEEEECCEEEEEEeEeeeccccCCCCCCCCEEeeeehHHHHHHHHHHHHHhcCCC-ccch
Confidence 578889999999999999999999999999999999999999999999999999999999999999999999999 9999
Q ss_pred hhhhccccccCCCCCCcHHHHhcCcCCCCCCcCCC--CCCCCcCCCCHHHHHHHHHcc-CCCCCCCCceecccCcHHHHH
Q 002031 560 IANIWPEFKSNGKDLIKVHHVLNHTSGLHNVSVDL--SSENPLLICDWDECLNRIALS-APETEPGQEQLYHYLSFGWLC 636 (977)
Q Consensus 560 v~~ylP~~~~~~~~~iTir~LLsHtSGl~~~~~~~--~~~~~~~~~~~~~~~~~l~~~-~~~~~pG~~~~Ysn~~~~~ll 636 (977)
|.+|+|++.. ++|||+|||+|||||+++.... ....+.......+....+... ++.++||+.|.|||.||. ||
T Consensus 84 v~~~lp~~~~---~~iTi~~LL~htSGl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pG~~~~Ysn~~~~-lL 159 (333)
T d1ei5a3 84 LEAYLDKFED---ERPAVRDLCNNQSGLRDYWALSVLCGADPEGVFLPAQAQSLLRRLKTTHFEPGSHYSYCNGNFR-IL 159 (333)
T ss_dssp HHHHTTTCCS---CCCCHHHHHTTCSCCCCHHHHHHHTTCCTTCCBCHHHHHHHHHTCCCCSSCTTSSCCCCHHHHH-HH
T ss_pred hhhhccccch---hhhhhccccccCCCCcccccccccccccccccchhhhHHHHHHhcCCCcCCCCceeecccchhH-HH
Confidence 9999999863 5699999999999999753211 123333455566777776665 457899999999999998 99
Q ss_pred HHHHHHHhCCCHHHHHHHHcccccCCCCccCCCCCCCcccCcceecccCCccccccCCCCCCCCCCCCCCCcchhhhhhh
Q 002031 637 GGIIERASGKKFQEILEEGIIQPLSIDGELYIGIPPGVESRLASLTIDTDDLNKVSGINNRPDLRLPSSFQPDKISQLAA 716 (977)
Q Consensus 637 g~iiE~vtG~~~~~~l~~~if~PLGm~~t~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~p~~~~p~~~~~~~~~~~~~ 716 (977)
|.|||+++|++|+++++++||+||||++|.|.. .......+.+|.........+
T Consensus 160 g~iie~~tg~~~~~~~~~~i~~PLgm~~t~~~~--~~~~~~~~~~~~~~~~~~~~~------------------------ 213 (333)
T d1ei5a3 160 ADLIEAHTGRTLVDILSERIFAPAGMKRAELIS--DTALFDECTGYEGDTVRGFLP------------------------ 213 (333)
T ss_dssp HHHHHHHHTSCHHHHHHHHTHHHHTCTTCEECC--BGGGCCSSCCEEEETTTEEEE------------------------
T ss_pred HHhhhhhcCCccchhhhhhhcCccCccceeccC--chhhccccccccccccccccc------------------------
Confidence 999999999999999999999999999997632 222233343432222111111
Q ss_pred cccccccchhccccccCccceecCHHHHHHHHHHHHcCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccccchhHHHHH
Q 002031 717 ITPAVFNMLNIRRAIIPAANGHCSARALARYYAALADGGVVPPPHSRLSKPPLGSHPHIPKFPSHETSKKQKGTKKELLA 796 (977)
Q Consensus 717 ~~~~~~~~~~~~~~~~~agG~~sTa~Dlar~~~~ll~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 796 (977)
..+.....++||+++|++||+||++++.++...+.. +++
T Consensus 214 --------~~~~~~~~gaggl~sta~Dla~~~~~l~~~~~~~~~---------------------------------~~~ 252 (333)
T d1ei5a3 214 --------ATNRIQWMGDAGICASLNDMIAWEQFIDATRDDESG---------------------------------LYR 252 (333)
T ss_dssp --------CCCCBBCCSSSCEEECHHHHHHHHHHHHHTTTCTTS---------------------------------HHH
T ss_pred --------ccccccccccCceeecHHHHHHHHHHhhcCCCCcHH---------------------------------Hhh
Confidence 112233568999999999999999998876655443 344
Q ss_pred HHhhccCCCCCCcccccCCCCCccccccCcchhhhhhhcccCCCCCCCccCCCCCCCCCCcccccccCCCcccccccCCC
Q 002031 797 ALKNKTNNSEHGHKYTKDLEGGSHIRTASGDTYARLINIETSSSNTSTTDSISNTDEPQSSNVRKIFNNPRIHDAFLGVG 876 (977)
Q Consensus 797 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 876 (977)
+|. .+.. ..+
T Consensus 253 ~~~----------------------------------~~~~-------------------------~~~----------- 262 (333)
T d1ei5a3 253 RLS----------------------------------GPQT-------------------------FKD----------- 262 (333)
T ss_dssp HHS----------------------------------SCCB-------------------------CTT-----------
T ss_pred hhc----------------------------------cccc-------------------------ccc-----------
Confidence 331 0000 000
Q ss_pred CCCCCCCCCCccccceeecCCCCCCccccccCC-ccCcce--eeecCCCeEEEEEeccCCCCCChHHHHHHHHHHh-CCC
Q 002031 877 DYGDLALPNGRFGLGFKRYNTRDGSYIGFGHSG-MGGSTG--FCDVNNRFAIAVTLNKMSFGATTGRIIHFVCSEL-NLP 952 (977)
Q Consensus 877 ~~~~~~~~~~~yGlG~~~~~~~~~~~~~~gH~G-~~G~~~--~~~P~~~~~ivvl~N~~~~~~~~~~~~~~v~~~l-~~~ 952 (977)
.....||+||++.. .++..+++|+| .+|+.+ +++|+.+++||+++|... + ...+...+.+.+ |++
T Consensus 263 ------~~~~~yG~G~~~~~--~~g~~~~gH~G~~~G~~s~~~~~p~~~~~vvvltN~~~--~-~~~~~~~l~~~~~g~~ 331 (333)
T d1ei5a3 263 ------GVAAPYGFGLNLHE--TGGKRLTGHGGALRGWRCQRWHCADERLSTIAMFNFEG--G-ASEVAFKLMNIALGVS 331 (333)
T ss_dssp ------SCBCSEETTEEEEE--ETTEEEEEEEEEETTEEEEEEEEGGGTEEEEEEESBSS--C-HHHHHHHHHHHHHTCC
T ss_pred ------cccCceeeeeEEee--cCCeeEEEeCCcCCCceEEEEEEecCCeEEEEEEeCCC--C-HHHHHHHHHHHHcCCC
Confidence 01247999999865 44566799999 667554 889999999999999753 2 334555555544 765
Q ss_pred C
Q 002031 953 V 953 (977)
Q Consensus 953 ~ 953 (977)
.
T Consensus 332 ~ 332 (333)
T d1ei5a3 332 S 332 (333)
T ss_dssp C
T ss_pred C
Confidence 3
|
| >d2dcfa1 e.3.1.1 (A:5-392) 6-aminohexanoate-dimer hydrolase NylC {Flavobacterium sp. [TaxId: 239]} | Back information, alignment and structure |
|---|
class: Multi-domain proteins (alpha and beta) fold: beta-lactamase/transpeptidase-like superfamily: beta-lactamase/transpeptidase-like family: beta-Lactamase/D-ala carboxypeptidase domain: 6-aminohexanoate-dimer hydrolase NylC species: Flavobacterium sp. [TaxId: 239]
Probab=100.00 E-value=4.9e-39 Score=366.04 Aligned_cols=284 Identities=16% Similarity=0.170 Sum_probs=211.1
Q ss_pred HHhccCCCccceEEEEEecCeeEEEeeccccCCCCCCCCCCCCcceeecchHHHHHHHHHHHHHCCCcCcCCchhhhccc
Q 002031 487 VELGNDGKILGIQVCAYKDGEVIIDTSAGMLGRYDPRPVQPDSLFPVFSVTKGITAGMLHWLVDNGKLKLEENIANIWPE 566 (977)
Q Consensus 487 ~~~~~~~~~pG~svaVv~~g~~v~~~~~G~~~~~~~~~~t~~T~f~i~SiTK~~ta~~v~~lv~~G~l~ld~~v~~ylP~ 566 (977)
++.+++..+. ++.|+++|++|+++++| ..+++|+|.++|+||+||++++++|+++|+|++|+||.+|+|+
T Consensus 70 ~~~l~~~~t~--a~lV~~~G~iv~E~y~~--------~~~~~t~~~~~SvtKs~ta~li~~lve~G~l~ldd~v~~ylPe 139 (388)
T d2dcfa1 70 EQRLEQTYTD--AFLVLRGTEVVAEYYRA--------GFAPDDRHLLMAVSKSLCGTVVGALVDEGRIDPAQPVTEYVPE 139 (388)
T ss_dssp HHHHHHTTEE--EEEEEETTEEEEEEECT--------TCCTTCCEECTTHHHHHHHHHHHHHHHTTSCCTTSBGGGTCGG
T ss_pred HHHHHhcCCc--EEEEEECCEEEEEEecC--------CCCcccchhHHHHHHHHHHHHHHHHHhcCcccccCcccccchh
Confidence 3333444444 46888999999999886 5789999999999999999999999999999999999999999
Q ss_pred cccCCCCCCcHHHHhcCcCCCCCCcCCCCCC------------CCcCCCCHHHHHHHHHccCCCCCCCCceecccCcHHH
Q 002031 567 FKSNGKDLIKVHHVLNHTSGLHNVSVDLSSE------------NPLLICDWDECLNRIALSAPETEPGQEQLYHYLSFGW 634 (977)
Q Consensus 567 ~~~~~~~~iTir~LLsHtSGl~~~~~~~~~~------------~~~~~~~~~~~~~~l~~~~~~~~pG~~~~Ysn~~~~~ 634 (977)
|....+++|||+|||+||||++......... .+.......+....+...+.. .||+.|.|+|.++.
T Consensus 140 ~~~~~~~~iTi~~LL~mtsGl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-~pg~~f~Y~~~~~~- 217 (388)
T d2dcfa1 140 LAGSVYDGPSVLQVLDMQISIDYNEDYVDPASEVQTHDRSAGWRTRRHGDPADTYEFLTTLRGD-GSTGEFQYCSANTD- 217 (388)
T ss_dssp GTTSTTSSCBHHHHHTTCBCCSCCCCSSCTTSHHHHHHHHHTSSCCCTTCCSSHHHHHHTCCCC-SCBSSCCCCHHHHH-
T ss_pred hcccccchhhHHHhhhcccCCccccccccccchhhhhhhhhhcccccccchHHHHHHHhccCcC-CCCCEEEEecCCHH-
Confidence 9988888999999999999998653322110 111122233455555555554 45667999999998
Q ss_pred HHHHHHHHHhCCCHHHHHHHHcccccCCCCccCCCCCCCcccCcceecccCCccccccCCCCCCCCCCCCCCCcchhhhh
Q 002031 635 LCGGIIERASGKKFQEILEEGIIQPLSIDGELYIGIPPGVESRLASLTIDTDDLNKVSGINNRPDLRLPSSFQPDKISQL 714 (977)
Q Consensus 635 llg~iiE~vtG~~~~~~l~~~if~PLGm~~t~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~p~~~~p~~~~~~~~~~~ 714 (977)
+||.|||++||++|.+|++++||+||||+++.+.....
T Consensus 218 lLg~iie~~tG~~~~~~~~e~i~~PlGm~~~~~~~~~~------------------------------------------ 255 (388)
T d2dcfa1 218 VLAWIVERVTGLRYVEALSTYLWAKLDADRDATITVDT------------------------------------------ 255 (388)
T ss_dssp HHHHHHHHHHCSCHHHHHHHHTGGGTTCSSCCEECBCT------------------------------------------
T ss_pred HHHHHHHHhcCccchhhhhhhccCcccccccccccccc------------------------------------------
Confidence 99999999999999999999999999999875531110
Q ss_pred hhcccccccchhccccccCccceecCHHHHHHHHHHHHcCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccccchhHHH
Q 002031 715 AAITPAVFNMLNIRRAIIPAANGHCSARALARYYAALADGGVVPPPHSRLSKPPLGSHPHIPKFPSHETSKKQKGTKKEL 794 (977)
Q Consensus 715 ~~~~~~~~~~~~~~~~~~~agG~~sTa~Dlar~~~~ll~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 794 (977)
.+...++||+.+|++|||||+++++++|.++++| =++++.
T Consensus 256 -------------~g~~~~~ggl~~tarDlarfg~l~l~~G~~~g~q---------------------------ils~~~ 295 (388)
T d2dcfa1 256 -------------TGFGFANGGVSCTARDLARVGRMMLDGGVAPGGR---------------------------VVSEDW 295 (388)
T ss_dssp -------------TCCBCTTTCEEECHHHHHHHHHHHHTTTEETTEE---------------------------CSCHHH
T ss_pred -------------cCcccccchhhhcccchhHHHHHHHhCCccCCcc---------------------------cchHHH
Confidence 0233478999999999999999999999998885 133345
Q ss_pred HHHHhhccCCCCCCcccccCCCCCccccccCcchhhhhhhcccCCCCCCCccCCCCCCCCCCcccccccCCCcccccccC
Q 002031 795 LAALKNKTNNSEHGHKYTKDLEGGSHIRTASGDTYARLINIETSSSNTSTTDSISNTDEPQSSNVRKIFNNPRIHDAFLG 874 (977)
Q Consensus 795 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 874 (977)
+++|...... ......+|..
T Consensus 296 i~~~~~~~~~-----------------~~~~~~~~~~------------------------------------------- 315 (388)
T d2dcfa1 296 VRRVLAGGSH-----------------EAMTDKGFTN------------------------------------------- 315 (388)
T ss_dssp HHHHHHCCCT-----------------TTCCCHHHHH-------------------------------------------
T ss_pred HHHHhcCCCc-----------------cccccccccc-------------------------------------------
Confidence 5554210000 0000000000
Q ss_pred CCCCCCCCCCCCccccceeecCCCCCCccccccCCccCcceeeecCCCeEEEEEeccCCC
Q 002031 875 VGDYGDLALPNGRFGLGFKRYNTRDGSYIGFGHSGMGGSTGFCDVNNRFAIAVTLNKMSF 934 (977)
Q Consensus 875 ~g~~~~~~~~~~~yGlG~~~~~~~~~~~~~~gH~G~~G~~~~~~P~~~~~ivvl~N~~~~ 934 (977)
..++.+||++|+... .+...|.|.|.+|+++|++|+++++||+++|...+
T Consensus 316 -------~~~~~~Yg~~ww~~~---~~~~~~~~~G~~GQ~i~vdP~~~lvIV~ls~~~~~ 365 (388)
T d2dcfa1 316 -------TFPDGSYTRQWWCTG---NERGNVSGIGIHGQNLWLDPLTDSVIVKLSSWPDP 365 (388)
T ss_dssp -------HCTTCEEETTEEECC---CTTCCEEEEETTTEEEEEEGGGTEEEEEEECCSSS
T ss_pred -------CCCCCCCCcceeecC---CCCCcEEEECCCCcEEEEEecCCEEEEEeCCCCCC
Confidence 012358999999854 23445899999999999999999999999997543
|
| >d1zara2 d.144.1.9 (A:91-281) Rio2 serine protein kinase C-terminal domain {Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: RIO1-like kinases domain: Rio2 serine protein kinase C-terminal domain species: Archaeoglobus fulgidus [TaxId: 2234]
Probab=99.75 E-value=6.6e-19 Score=179.00 Aligned_cols=150 Identities=17% Similarity=0.194 Sum_probs=98.6
Q ss_pred cccccccccEEEEEEecCCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCcHHHHH
Q 002031 124 TPLATASIAQVHRATLVDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEAE 203 (977)
Q Consensus 124 ~piasaSigqV~~A~l~~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea~ 203 (977)
++||+|++|+||+|++.+|++||||+++++...... .+..+.. .-.....+ .......|.+
T Consensus 6 ~~IG~G~~g~Vy~a~~~~g~~vAvKi~r~~~~~~~~--~~~~~~~-----------~~~~~~~~------~~~~~~~e~~ 66 (191)
T d1zara2 6 KLMGEGKESAVFNCYSEKFGECVVKFHKVGHTSFKK--VKEKRDY-----------GDLHFSVL------AIRSARNEFR 66 (191)
T ss_dssp EEEEECSSEEEEEEEETTTEEEEEEEECC------C--CCC------------------CHHHH------HHHHHHHHHH
T ss_pred CEeeeCcceEEEEEECCCCCEEEEEEEecccchhhh--hhhhhhh-----------ccHHHHHH------HHHHHHHHHH
Confidence 579999999999999999999999999987542100 0000000 00000000 0112344555
Q ss_pred HHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeeecCCceEEeeccCCCCCCChHHHHhcCCCHHHHHHHHHHHHHHHHH
Q 002031 204 NTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQSSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAYAHQIY 283 (977)
Q Consensus 204 n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~l~~i~ 283 (977)
++.++. .+.+|+.+.....+|+|||++|..+.++. ......++..+++. +.++|
T Consensus 67 ~l~~l~--------------------~~~v~~~~~~~~~~lvme~~~~~~~~~l~-----~~~~~~i~~ql~~~-l~~lH 120 (191)
T d1zara2 67 ALQKLQ--------------------GLAVPKVYAWEGNAVLMELIDAKELYRVR-----VENPDEVLDMILEE-VAKFY 120 (191)
T ss_dssp HHHHTT--------------------TSSSCCEEEEETTEEEEECCCCEEGGGCC-----CSCHHHHHHHHHHH-HHHHH
T ss_pred HHHHcc--------------------CCCcceEEEecCCEEEEEeeccccccchh-----hHHHHHHHHHHHHH-HHHHh
Confidence 655442 24577777666779999999997765531 12345566666554 77899
Q ss_pred hcCccccCCCCCCeEEccCCCCceEEEecccccccCHH
Q 002031 284 VDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSSS 321 (977)
Q Consensus 284 ~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~~ 321 (977)
..|++||||||+|||+++ +.++|||||++...+..
T Consensus 121 ~~giiHrDiKP~NILv~~---~~~~liDFG~a~~~~~~ 155 (191)
T d1zara2 121 HRGIVHGDLSQYNVLVSE---EGIWIIDFPQSVEVGEE 155 (191)
T ss_dssp HTTEECSCCSTTSEEEET---TEEEECCCTTCEETTST
T ss_pred hCCEEEccCChhheeeeC---CCEEEEECCCcccCCCC
Confidence 999999999999999984 46999999999888644
|
| >d2jfla1 d.144.1.7 (A:21-308) STE20-like serine/threonine-protein kinase, SLK {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: STE20-like serine/threonine-protein kinase, SLK species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.69 E-value=2e-17 Score=178.95 Aligned_cols=150 Identities=14% Similarity=0.136 Sum_probs=106.8
Q ss_pred hhhcccccCccccccccccEEEEEEec-CCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhc
Q 002031 114 MGGMFMDFVETPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEA 192 (977)
Q Consensus 114 ~~~~f~~~d~~piasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l 192 (977)
+++.|+-+ +.||+|++|.||+|+.+ +|+.||||+.+....+.+
T Consensus 10 p~d~Y~i~--~~iG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~---------------------------------- 53 (288)
T d2jfla1 10 PEDFWEII--GELGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEEL---------------------------------- 53 (288)
T ss_dssp GGGTEEEE--EEEEEETTEEEEEEEETTTCCEEEEEEEECSSSGGG----------------------------------
T ss_pred cccCeEEe--EEEeeCCCcEEEEEEECCCCeEEEEEEECcCCHHHH----------------------------------
Confidence 44555443 46999999999999974 799999999764322110
Q ss_pred ccccCcHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeee-cCCceEEeeccCCCCCCChHHHHhcCCCHHHHH
Q 002031 193 PKELDFNSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVV 271 (977)
Q Consensus 193 ~~Eld~~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~ 271 (977)
-.|.+|++.+.++.+ ..-+.+=.++. ....+|||||++|.+|.++.......++...+.
T Consensus 54 ---~~~~~E~~il~~l~H-----------------pnIv~l~~~~~~~~~~~lvmEy~~~g~L~~~~~~~~~~l~e~~~~ 113 (288)
T d2jfla1 54 ---EDYMVEIDILASCDH-----------------PNIVKLLDAFYYENNLWILIEFCAGGAVDAVMLELERPLTESQIQ 113 (288)
T ss_dssp ---GGTHHHHHHHHHCCC-----------------TTBCCEEEEEEETTEEEEEEECCTTEEHHHHHHHHTSCCCHHHHH
T ss_pred ---HHHHHHHHHHHhCCC-----------------CCCCeEEEEEeeCCeEEEEEecCCCCcHHHHHHhcCCCCCHHHHH
Confidence 135667776665532 11122323333 456689999999999987644333457776666
Q ss_pred HHHHHHH--HHHHHhcCccccCCCCCCeEEccCCCCceEEEecccccccCHH
Q 002031 272 EEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSSS 321 (977)
Q Consensus 272 ~~l~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~~ 321 (977)
..+.+++ +..+|..|++|||+||+|||++.+ ++++|+|||++..+...
T Consensus 114 ~i~~qi~~gL~ylH~~~ivHrDiKp~NIll~~~--~~~Kl~DFG~a~~~~~~ 163 (288)
T d2jfla1 114 VVCKQTLDALNYLHDNKIIHRDLKAGNILFTLD--GDIKLADFGVSAKNTRT 163 (288)
T ss_dssp HHHHHHHHHHHHHHHTTEECCCCSGGGEEECTT--SCEEECCCTTCEECHHH
T ss_pred HHHHHHHHHHHHHHHCCEEEeecChhheeECCC--CCEEEEechhhhccCCC
Confidence 6665655 888999999999999999999865 89999999999877543
|
| >d1yhwa1 d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: pak1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.68 E-value=3.7e-17 Score=177.24 Aligned_cols=146 Identities=14% Similarity=0.176 Sum_probs=103.7
Q ss_pred hhcccccCccccccccccEEEEEEe-cCCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcc
Q 002031 115 GGMFMDFVETPLATASIAQVHRATL-VDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAP 193 (977)
Q Consensus 115 ~~~f~~~d~~piasaSigqV~~A~l-~~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~ 193 (977)
.+-|+.+ +.||+|++|.||+|+. .+|+.||||+.+..-...
T Consensus 19 ~~~Y~~~--~~iG~G~fg~Vy~a~~~~~~~~vAvK~~~~~~~~~------------------------------------ 60 (293)
T d1yhwa1 19 KKKYTRF--EKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPK------------------------------------ 60 (293)
T ss_dssp TTTBCSC--EECCCSSSCEEEEEEBTTTCCEEEEEEEEGGGCSC------------------------------------
T ss_pred ccccEEE--EEEecCcCcEEEEEEECCCCCEEEEEEEecccChH------------------------------------
Confidence 3445544 4699999999999997 489999999875321100
Q ss_pred cccCcHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeee-cCCceEEeeccCCCCCCChHHHHhcCCCHHHHHH
Q 002031 194 KELDFNSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVE 272 (977)
Q Consensus 194 ~Eld~~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~ 272 (977)
.-.+.+|++.+.++.+ ..-+.+-.++. ....+|||||++|.+|.++ .....++...+..
T Consensus 61 -~~~~~~E~~il~~l~H-----------------pnIv~~~~~~~~~~~~~ivmEy~~gg~L~~~--~~~~~l~~~~~~~ 120 (293)
T d1yhwa1 61 -KELIINEILVMRENKN-----------------PNIVNYLDSYLVGDELWVVMEYLAGGSLTDV--VTETCMDEGQIAA 120 (293)
T ss_dssp -HHHHHHHHHHHHHCCC-----------------TTBCCEEEEEEETTEEEEEEECCTTCBHHHH--HHHSCCCHHHHHH
T ss_pred -HHHHHHHHHHHHhCCC-----------------CCEeeEeEEEEECCEEEEEEEecCCCcHHHH--hhccCCCHHHHHH
Confidence 0024456665555432 11122222232 4556899999999999876 3445677777776
Q ss_pred HHHHHH--HHHHHhcCccccCCCCCCeEEccCCCCceEEEecccccccCH
Q 002031 273 EITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 320 (977)
Q Consensus 273 ~l~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 320 (977)
.+.+++ +..+|..|++|||+||.|||++.+ |+++|+|||+++.++.
T Consensus 121 i~~qi~~aL~yLH~~~iiHrDiKp~NILl~~~--~~vkl~DFG~a~~~~~ 168 (293)
T d1yhwa1 121 VCRECLQALEFLHSNQVIHRDIKSDNILLGMD--GSVKLTDFGFCAQITP 168 (293)
T ss_dssp HHHHHHHHHHHHHHTTEECCCCSGGGEEECTT--CCEEECCCTTCEECCS
T ss_pred HHHHHHHHHHHHHHCCCcccCCcHHHeEECCC--CcEeeccchhheeecc
Confidence 666665 889999999999999999999865 8999999999988754
|
| >d1koba_ d.144.1.7 (A:) Twitchin, kinase domain {California sea hare (Aplysia californica), twk43 [TaxId: 6500]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Twitchin, kinase domain species: California sea hare (Aplysia californica), twk43 [TaxId: 6500]
Probab=99.66 E-value=3.1e-17 Score=182.52 Aligned_cols=150 Identities=21% Similarity=0.307 Sum_probs=103.1
Q ss_pred cccccC-ccccccccccEEEEEEe-cCCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhccc
Q 002031 117 MFMDFV-ETPLATASIAQVHRATL-VDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPK 194 (977)
Q Consensus 117 ~f~~~d-~~piasaSigqV~~A~l-~~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ 194 (977)
+|+.++ .+.||+|+||.||+|+. .+|+.||||+.+..... |..
T Consensus 27 ~~d~Y~i~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~----~~~------------------------------- 71 (352)
T d1koba_ 27 VYDYYDILEELGSGAFGVVHRCVEKATGRVFVAKFINTPYPL----DKY------------------------------- 71 (352)
T ss_dssp GGGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSHH----HHH-------------------------------
T ss_pred cccceEEEEEEecCCCeEEEEEEECCCCCEEEEEEECCcchh----HHH-------------------------------
Confidence 444343 36899999999999997 48999999987643211 000
Q ss_pred ccCcHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeee-cCCceEEeeccCCCCCCChHHHHhcCCCHHHHHHH
Q 002031 195 ELDFNSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEE 273 (977)
Q Consensus 195 Eld~~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~ 273 (977)
.+.+|++.+.++.+ ..-+.+-.++. ....+|||||++|.+|.+........++...+...
T Consensus 72 --~~~~Ei~il~~l~H-----------------pnIv~~~~~~~~~~~~~ivmE~~~gg~L~~~~~~~~~~l~e~~~~~i 132 (352)
T d1koba_ 72 --TVKNEISIMNQLHH-----------------PKLINLHDAFEDKYEMVLILEFLSGGELFDRIAAEDYKMSEAEVINY 132 (352)
T ss_dssp --HHHHHHHHHTTCCS-----------------TTBCCEEEEEECSSEEEEEEECCCCCBHHHHTTCTTCCBCHHHHHHH
T ss_pred --HHHHHHHHHHhCCC-----------------CCCCcEEEEEEECCEEEEEEEcCCCChHHHHHHhcCCCCCHHHHHHH
Confidence 13345555444321 11122223333 45568999999999986643222334677776666
Q ss_pred HHHHH--HHHHHhcCccccCCCCCCeEEccCCCCceEEEecccccccCH
Q 002031 274 ITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 320 (977)
Q Consensus 274 l~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 320 (977)
+.+++ +..+|..|++||||||+|||++...+++++|+|||++..+..
T Consensus 133 ~~qi~~aL~ylH~~~iiHRDiKp~NILl~~~~~~~vkL~DFGla~~~~~ 181 (352)
T d1koba_ 133 MRQACEGLKHMHEHSIVHLDIKPENIMCETKKASSVKIIDFGLATKLNP 181 (352)
T ss_dssp HHHHHHHHHHHHHTTEECCCCCGGGEEESSTTCCCEEECCCTTCEECCT
T ss_pred HHHHHHHHHHHHHCCeeecccccccccccccCCCeEEEeecccceecCC
Confidence 66655 889999999999999999999854458999999999988764
|
| >d1sm2a_ d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Tyrosine-protein kinase Itk/Tsk species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.65 E-value=5.9e-17 Score=172.97 Aligned_cols=141 Identities=20% Similarity=0.197 Sum_probs=96.8
Q ss_pred cccccccccEEEEEEecCCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCcHHHHH
Q 002031 124 TPLATASIAQVHRATLVDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEAE 203 (977)
Q Consensus 124 ~piasaSigqV~~A~l~~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea~ 203 (977)
+.||+|+||+||+|++++++.||||+.+.+... +-+|.+|++
T Consensus 11 ~~iG~G~fg~Vy~~~~~~~~~vAvK~i~~~~~~--------------------------------------~~~~~~E~~ 52 (263)
T d1sm2a_ 11 QEIGSGQFGLVHLGYWLNKDKVAIKTIREGAMS--------------------------------------EEDFIEEAE 52 (263)
T ss_dssp EEEECCSSCCEEEEEETTTEEEEEEECCSSSSC--------------------------------------HHHHHHHHH
T ss_pred EEEeeCCCeEEEEEEECCCCEEEEEEECCCcCc--------------------------------------HHHHHHHHH
Confidence 569999999999999999999999987653211 013566777
Q ss_pred HHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeee-cCCceEEeeccCCCCCCChHHHHhcCCCHHHHHHHHHHHH--HH
Q 002031 204 NTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--AH 280 (977)
Q Consensus 204 n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~--l~ 280 (977)
.+.++++ ..-+.+=.++. ....+|||||++|++|.++........+...+...+.++. +.
T Consensus 53 ~l~~l~H-----------------pnIv~~~g~~~~~~~~~lv~E~~~~g~L~~~l~~~~~~~~~~~~~~i~~qia~gl~ 115 (263)
T d1sm2a_ 53 VMMKLSH-----------------PKLVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMA 115 (263)
T ss_dssp HHHHCCC-----------------TTBCCEEEEECSSSSCEEEEECCTTCBHHHHHHTTTTCCCHHHHHHHHHHHHHHHH
T ss_pred HHHhcCC-----------------CCcccccceeccCCceEEEEEecCCCcHHHHhhccccCCCHHHHHHHHHHHHHHHH
Confidence 7776643 11122222222 4667899999999999886433333455555555555544 88
Q ss_pred HHHhcCccccCCCCCCeEEccCCCCceEEEecccccccCHH
Q 002031 281 QIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSSS 321 (977)
Q Consensus 281 ~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~~ 321 (977)
.+|..|++|||+||.|||++.+ +.++|+|||+++.+...
T Consensus 116 ~lH~~~iiHrDlKp~Nill~~~--~~~Kl~DFGla~~~~~~ 154 (263)
T d1sm2a_ 116 YLEEACVIHRDLAARNCLVGEN--QVIKVSDFGMTRFVLDD 154 (263)
T ss_dssp HHHHTTCCCTTCSGGGEEECGG--GCEEECSCC--------
T ss_pred hhhccceeecccchhheeecCC--CCeEecccchheeccCC
Confidence 8999999999999999999966 89999999999877543
|
| >d1tkia_ d.144.1.7 (A:) Titin, kinase domain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Titin, kinase domain species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.65 E-value=8.8e-17 Score=176.69 Aligned_cols=150 Identities=16% Similarity=0.258 Sum_probs=105.1
Q ss_pred hcccccC-ccccccccccEEEEEEec-CCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcc
Q 002031 116 GMFMDFV-ETPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAP 193 (977)
Q Consensus 116 ~~f~~~d-~~piasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~ 193 (977)
|+|+.+. .+.||+|+||+||+|+.+ +|+.||||+.+..-.+.
T Consensus 2 ~~~~rY~i~~~lG~G~fg~Vy~~~~~~~~~~~AiK~i~~~~~~~------------------------------------ 45 (321)
T d1tkia_ 2 ELYEKYMIAEDLGRGEFGIVHRCVETSSKKTYMAKFVKVKGTDQ------------------------------------ 45 (321)
T ss_dssp CCTTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCCTHHH------------------------------------
T ss_pred CCccceEEEEEEecCCCeEEEEEEECCCCcEEEEEEEcCCcccH------------------------------------
Confidence 3444433 368999999999999985 79999999986432110
Q ss_pred cccCcHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeee-cCCceEEeeccCCCCCCChHHHHhcCCCHHHHHH
Q 002031 194 KELDFNSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVE 272 (977)
Q Consensus 194 ~Eld~~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~ 272 (977)
..+.+|.+.+.++++ ..-+.+-.++. ....+|||||++|.+|.+........++...+..
T Consensus 46 --~~~~~Ei~il~~l~H-----------------pnIv~~~~~~~~~~~~~lvmE~~~gg~L~~~i~~~~~~l~e~~~~~ 106 (321)
T d1tkia_ 46 --VLVKKEISILNIARH-----------------RNILHLHESFESMEELVMIFEFISGLDIFERINTSAFELNEREIVS 106 (321)
T ss_dssp --HHHHHHHHHHHHSCC-----------------TTBCCEEEEEEETTEEEEEECCCCCCBHHHHHTSSSCCCCHHHHHH
T ss_pred --HHHHHHHHHHHhCCC-----------------CCCCeEEEEEEECCEEEEEEecCCCCcHHHHHHhcCCCCCHHHHHH
Confidence 013346555554422 11233334444 5667999999999998776332222467777766
Q ss_pred HHHHHH--HHHHHhcCccccCCCCCCeEEccCCCCceEEEecccccccCH
Q 002031 273 EITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 320 (977)
Q Consensus 273 ~l~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 320 (977)
.+.+++ +..+|..|++||||||.|||++.++..+++|+|||++..+..
T Consensus 107 i~~qi~~al~yLH~~~iiHrDlKp~NIll~~~~~~~ikl~DFG~~~~~~~ 156 (321)
T d1tkia_ 107 YVHQVCEALQFLHSHNIGHFDIRPENIIYQTRRSSTIKIIEFGQARQLKP 156 (321)
T ss_dssp HHHHHHHHHHHHHHTTEECCCCCGGGEEESSSSCCCEEECCCTTCEECCT
T ss_pred HHHHHHHHHHHHHHcCCCcccccccceeecCCCceEEEEcccchhhcccc
Confidence 666655 889999999999999999999866557899999999987654
|
| >d1qpca_ d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Lymphocyte kinase (lck) species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.64 E-value=1e-16 Score=171.96 Aligned_cols=140 Identities=21% Similarity=0.245 Sum_probs=101.0
Q ss_pred cccccccccEEEEEEecCCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCcHHHHH
Q 002031 124 TPLATASIAQVHRATLVDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEAE 203 (977)
Q Consensus 124 ~piasaSigqV~~A~l~~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea~ 203 (977)
+.||+|+||.||+|++++++.||||+.+.+.... + .|.+|++
T Consensus 19 ~~iG~G~fg~Vy~~~~~~~~~vAvK~~~~~~~~~----------------------------~----------~~~~E~~ 60 (272)
T d1qpca_ 19 ERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSP----------------------------D----------AFLAEAN 60 (272)
T ss_dssp EEEEEETTEEEEEEEETTTEEEEEEEECTTSSCH----------------------------H----------HHHHHHH
T ss_pred EEEecCCCcEEEEEEECCCCEEEEEEEccCcCCH----------------------------H----------HHHHHHH
Confidence 5799999999999999888999999876432100 0 2556777
Q ss_pred HHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeeecCCceEEeeccCCCCCCChHHH-HhcCCCHHHHHHHHHHHH--HH
Q 002031 204 NTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQSSETVLILEFMDGIRLNDCESL-EAFGVNKQKVVEEITRAY--AH 280 (977)
Q Consensus 204 n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~~~~~vLVmE~i~G~~L~~~~~~-~~~~~~~~~l~~~l~~~~--l~ 280 (977)
.+.++++ ..-+.+-.+......+|||||++|++|.+.... ....++...+...+.++. +.
T Consensus 61 ~l~~l~H-----------------pnIv~~~g~~~~~~~~iv~Ey~~~g~L~~~~~~~~~~~l~~~~~~~i~~qi~~gl~ 123 (272)
T d1qpca_ 61 LMKQLQH-----------------QRLVRLYAVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMA 123 (272)
T ss_dssp HHHHCCC-----------------TTBCCEEEEECSSSCEEEEECCTTCBHHHHTTSHHHHTCCHHHHHHHHHHHHHHHH
T ss_pred HHHhCCC-----------------CCEeEEEeeeccCCeEEEEEeCCCCcHHHHHhhcCCCCCCHHHHHHHHHHHHHHHH
Confidence 7666532 111222222224556899999999998765322 223466666666666655 88
Q ss_pred HHHhcCccccCCCCCCeEEccCCCCceEEEecccccccCH
Q 002031 281 QIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 320 (977)
Q Consensus 281 ~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 320 (977)
.+|..|++||||||.||||+.+ +.++|+|||+++.+..
T Consensus 124 ~lH~~~ivHrDiKp~NIll~~~--~~~Kl~DFGla~~~~~ 161 (272)
T d1qpca_ 124 FIEERNYIHRDLRAANILVSDT--LSCKIADFGLARLIED 161 (272)
T ss_dssp HHHHTTEECSCCSGGGEEECTT--SCEEECCCTTCEECSS
T ss_pred HHHhCCcccCccchhheeeecc--cceeeccccceEEccC
Confidence 8999999999999999999865 8999999999987753
|
| >d1koaa2 d.144.1.7 (A:5915-6264) Twitchin, kinase domain {Caenorhabditis elegans, pjk4 [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Twitchin, kinase domain species: Caenorhabditis elegans, pjk4 [TaxId: 6239]
Probab=99.64 E-value=9e-17 Score=178.60 Aligned_cols=143 Identities=22% Similarity=0.323 Sum_probs=102.5
Q ss_pred cccccccccEEEEEEec-CCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCcHHHH
Q 002031 124 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (977)
Q Consensus 124 ~piasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea 202 (977)
+.||+|++|+||+|+.+ +|+.||||+....... +.+ .+.+|+
T Consensus 32 ~~lG~G~fg~Vy~~~~~~~g~~vAvK~i~~~~~~----~~~---------------------------------~~~~E~ 74 (350)
T d1koaa2 32 EELGTGAFGVVHRVTERATGNNFAAKFVMTPHES----DKE---------------------------------TVRKEI 74 (350)
T ss_dssp EEEEEETTEEEEEEEETTTTEEEEEEEECCCSHH----HHH---------------------------------HHHHHH
T ss_pred EEEecCcCeEEEEEEECCCCCEEEEEEEcccchh----hHH---------------------------------HHHHHH
Confidence 67999999999999974 7999999987543211 100 134566
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeee-cCCceEEeeccCCCCCCChHHHHhcCCCHHHHHHHHHHHH--H
Q 002031 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--A 279 (977)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~--l 279 (977)
+.+.++++ ..-+.+-.++. ....+|||||++|++|.+........++...+...+.+++ +
T Consensus 75 ~il~~l~H-----------------pnIv~~~~~~~~~~~~~ivmE~~~gg~L~~~l~~~~~~l~e~~~~~i~~qi~~aL 137 (350)
T d1koaa2 75 QTMSVLRH-----------------PTLVNLHDAFEDDNEMVMIYEFMSGGELFEKVADEHNKMSEDEAVEYMRQVCKGL 137 (350)
T ss_dssp HHHHHTCC-----------------TTBCCEEEEEEETTEEEEEECCCCSCBHHHHHTCTTSCBCHHHHHHHHHHHHHHH
T ss_pred HHHHhCCC-----------------CCCCcEEEEEEECCEEEEEEEcCCCCCHHHHHHhhcCCCCHHHHHHHHHHHHHHH
Confidence 66666532 11222333333 5567899999999998766422233466666666666655 8
Q ss_pred HHHHhcCccccCCCCCCeEEccCCCCceEEEecccccccCH
Q 002031 280 HQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 320 (977)
Q Consensus 280 ~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 320 (977)
..+|..|++||||||+|||++.+.++.++|+|||+++.++.
T Consensus 138 ~ylH~~~iiHrDiKp~NIll~~~~~~~vkL~DFG~a~~~~~ 178 (350)
T d1koaa2 138 CHMHENNYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDP 178 (350)
T ss_dssp HHHHHTTEECCCCCGGGEEESSTTSCCEEECCCTTCEECCT
T ss_pred HHHHhcCCeeeeechhHeeeccCCCCeEEEeecchheeccc
Confidence 88999999999999999999765558999999999988764
|
| >d2j4za1 d.144.1.7 (A:126-388) Aurora-related kinase 1 (aurora-2) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Aurora-related kinase 1 (aurora-2) species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.64 E-value=1.4e-16 Score=169.91 Aligned_cols=143 Identities=17% Similarity=0.118 Sum_probs=99.7
Q ss_pred cccccccccEEEEEEec-CCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCcHHHH
Q 002031 124 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (977)
Q Consensus 124 ~piasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea 202 (977)
+.||+|++|+||+|+.+ +|+.||||+.++.....- ..+-.+.+|+
T Consensus 12 ~~iG~G~fg~Vy~~~~~~~~~~vAiK~i~~~~~~~~----------------------------------~~~~~~~~E~ 57 (263)
T d2j4za1 12 RPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKA----------------------------------GVEHQLRREV 57 (263)
T ss_dssp EEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHT----------------------------------TCHHHHHHHH
T ss_pred EEEecCCCcEEEEEEECCCCcEEEEEEEchHHccCh----------------------------------HHHHHHHHHH
Confidence 68999999999999985 799999998753211000 0011234566
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeee-cCCceEEeeccCCCCCCChHHHHhcCCCHHHHHHHHHHHH--H
Q 002031 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--A 279 (977)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~--l 279 (977)
+.+.++.+ ..-+.+=.++. ...-+|||||++|.+|.+... ....++...+...+.+++ +
T Consensus 58 ~il~~l~h-----------------pnIv~~~~~~~~~~~~~ivmEy~~~g~L~~~l~-~~~~l~e~~~~~i~~qi~~al 119 (263)
T d2j4za1 58 EIQSHLRH-----------------PNILRLYGYFHDATRVYLILEYAPLGTVYRELQ-KLSKFDEQRTATYITELANAL 119 (263)
T ss_dssp HHHHTCCC-----------------TTBCCEEEEEECSSEEEEEEECCTTCBHHHHHH-HHSSCCHHHHHHHHHHHHHHH
T ss_pred HHHHhcCC-----------------CCCCeEEEEEEECCEEEEEEeecCCCcHHHHHh-hcCCCCHHHHHHHHHHHHHHH
Confidence 55554421 11122222333 455689999999999987643 234567666666666655 8
Q ss_pred HHHHhcCccccCCCCCCeEEccCCCCceEEEecccccccCH
Q 002031 280 HQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 320 (977)
Q Consensus 280 ~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 320 (977)
..+|..|++|||+||+|||++.+ +.++|+|||++..++.
T Consensus 120 ~~lH~~~ivHrDiKp~Nill~~~--~~~kl~DFG~a~~~~~ 158 (263)
T d2j4za1 120 SYCHSKRVIHRDIKPENLLLGSA--GELKIADFGWSVHAPS 158 (263)
T ss_dssp HHHHHTTCCCCCCCGGGEEECTT--SCEEECCCCSCSCCCC
T ss_pred HHHHHCCeeeeeeccccceecCC--CCEeecccceeeecCC
Confidence 88999999999999999999865 8999999999987754
|
| >d1nvra_ d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cell cycle checkpoint kinase chk1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.63 E-value=1.6e-16 Score=170.32 Aligned_cols=141 Identities=18% Similarity=0.158 Sum_probs=98.8
Q ss_pred cccccccccEEEEEEec-CCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCcHHHH
Q 002031 124 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (977)
Q Consensus 124 ~piasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea 202 (977)
+.||+|++|.||+|+.+ +|+.||||+.+..-... ..-++.+|+
T Consensus 11 ~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~------------------------------------~~~~~~~Ei 54 (271)
T d1nvra_ 11 QTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVD------------------------------------CPENIKKEI 54 (271)
T ss_dssp EEEEEETTEEEEEEEETTTCCEEEEEEEECC-------------------------------------------CHHHHH
T ss_pred EEEecCcCeEEEEEEECCCCCEEEEEEEehhhcch------------------------------------HHHHHHHHH
Confidence 57999999999999984 79999999875321100 001356677
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeee-cCCceEEeeccCCCCCCChHHHHhcCCCHHHHHHHHHHHH--H
Q 002031 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--A 279 (977)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~--l 279 (977)
+.+.++.+ ..-+.+=..+. ....+|||||++|++|.+... ....++...+...+.+++ +
T Consensus 55 ~~l~~l~H-----------------pnIv~~~~~~~~~~~~~ivmEy~~gg~L~~~l~-~~~~l~e~~~~~i~~qi~~al 116 (271)
T d1nvra_ 55 CINKMLNH-----------------ENVVKFYGHRREGNIQYLFLEYCSGGELFDRIE-PDIGMPEPDAQRFFHQLMAGV 116 (271)
T ss_dssp HHHHTCCC-----------------TTBCCEEEEEEETTEEEEEEECCTTEEGGGGSB-TTTBCCHHHHHHHHHHHHHHH
T ss_pred HHHHhCCC-----------------CCEeeEeeeeccCceeEEEEeccCCCcHHHHHh-cCCCCCHHHHHHHHHHHHHHH
Confidence 66655432 11122222222 455679999999999988743 223466666655555554 8
Q ss_pred HHHHhcCccccCCCCCCeEEccCCCCceEEEecccccccCH
Q 002031 280 HQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 320 (977)
Q Consensus 280 ~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 320 (977)
..+|..|++|||+||+|||++.+ ++++|+|||+++.++.
T Consensus 117 ~ylH~~~IiHrDiKp~NILl~~~--~~~KL~DFG~a~~~~~ 155 (271)
T d1nvra_ 117 VYLHGIGITHRDIKPENLLLDER--DNLKISDFGLATVFRY 155 (271)
T ss_dssp HHHHHTTEECSCCCGGGEEECTT--CCEEECCCTTCEECEE
T ss_pred HHHHHcCCccCcccHHHEEECCC--CCEEEccchhheeecc
Confidence 88999999999999999999865 8999999999987643
|
| >d1xbba_ d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Tyrosine-protein kinase SYK species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.63 E-value=1e-16 Score=172.47 Aligned_cols=146 Identities=17% Similarity=0.228 Sum_probs=101.7
Q ss_pred ccCccccccccccEEEEEEec---CCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhccccc
Q 002031 120 DFVETPLATASIAQVHRATLV---DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKEL 196 (977)
Q Consensus 120 ~~d~~piasaSigqV~~A~l~---~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~El 196 (977)
.+|++.||+|+||+||+|+++ +++.||||+.+......- .. -
T Consensus 9 ~le~k~iG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~-------------------------~~----------~ 53 (277)
T d1xbba_ 9 TLEDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPA-------------------------LK----------D 53 (277)
T ss_dssp EEEEEEEEECSSEEEEEEEEECSSSEEEEEEEEEC-----CH-------------------------HH----------H
T ss_pred eecCCCcccCCCeEEEEEEEccCCcCeEEEEEEEChhhCCHH-------------------------HH----------H
Confidence 456678999999999999864 457899999864321100 00 0
Q ss_pred CcHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeeecCCceEEeeccCCCCCCChHHHHhcCCCHHHHHHHHHH
Q 002031 197 DFNSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQSSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITR 276 (977)
Q Consensus 197 d~~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~ 276 (977)
.|.+|++.+.++++ ..-+.+=.+......+|||||++|++|.++.. ....++...+...+.+
T Consensus 54 ~~~~E~~il~~l~H-----------------pnIv~~~g~~~~~~~~lvmE~~~~g~L~~~l~-~~~~l~~~~~~~i~~q 115 (277)
T d1xbba_ 54 ELLAEANVMQQLDN-----------------PYIVRMIGICEAESWMLVMEMAELGPLNKYLQ-QNRHVKDKNIIELVHQ 115 (277)
T ss_dssp HHHHHHHHHHTCCC-----------------TTBCCEEEEEESSSEEEEEECCTTEEHHHHHH-HCTTCCHHHHHHHHHH
T ss_pred HHHHHHHHHHhCCC-----------------CCCceEEEEeccCCEEEEEEcCCCCcHHHHHh-hccCCCHHHHHHHHHH
Confidence 25567766665532 11122222233456689999999999988743 2334666766666666
Q ss_pred HH--HHHHHhcCccccCCCCCCeEEccCCCCceEEEecccccccCH
Q 002031 277 AY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 320 (977)
Q Consensus 277 ~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 320 (977)
+. +..+|..|++|||+||.|||++.+ +.++|+|||+++.+..
T Consensus 116 i~~gl~ylH~~~iiHrDlKp~Nill~~~--~~~kl~DFGla~~~~~ 159 (277)
T d1xbba_ 116 VSMGMKYLEESNFVHRDLAARNVLLVTQ--HYAKISDFGLSKALRA 159 (277)
T ss_dssp HHHHHHHHHHTTEECSCCSGGGEEEEET--TEEEECCCTTCEECCT
T ss_pred HHHHHhhHHhCCcccCCCcchhhccccc--Ccccccchhhhhhccc
Confidence 55 888999999999999999999966 8999999999987653
|
| >d1opja_ d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Abelsone tyrosine kinase (abl) species: Mouse (Mus musculus) [TaxId: 10090]
Probab=99.62 E-value=1.5e-16 Score=171.99 Aligned_cols=140 Identities=20% Similarity=0.182 Sum_probs=99.4
Q ss_pred cccccccccEEEEEEec-CCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCcHHHH
Q 002031 124 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (977)
Q Consensus 124 ~piasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea 202 (977)
+.||+|+||+||+|+++ +|+.||||+.+.+.... + +|.+|+
T Consensus 23 ~~iG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~~~----------------------------~----------~~~~E~ 64 (287)
T d1opja_ 23 HKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEV----------------------------E----------EFLKEA 64 (287)
T ss_dssp EETTTTTTSSEEEEEEGGGTEEEEEEECCTTCSCH----------------------------H----------HHHHHH
T ss_pred eEEeeCCCeEEEEEEECCCCeEEEEEEECCccchH----------------------------H----------HHHHHH
Confidence 67999999999999985 68999999876432110 0 255677
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeee-cCCceEEeeccCCCCCCChHHHH-hcCCCHHHHHHHHHHHH--
Q 002031 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLE-AFGVNKQKVVEEITRAY-- 278 (977)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLVmE~i~G~~L~~~~~~~-~~~~~~~~l~~~l~~~~-- 278 (977)
+.+.++++ ..-+.+=.++. ....+|||||++|++|.+..... ...++...+...+.++.
T Consensus 65 ~il~~l~H-----------------pnIv~~~~~~~~~~~~~iv~E~~~~g~l~~~l~~~~~~~~~~~~~~~i~~qi~~g 127 (287)
T d1opja_ 65 AVMKEIKH-----------------PNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSA 127 (287)
T ss_dssp HHHHHCCC-----------------TTBCCEEEEECSSSSCEEEEECCTTCBHHHHHHHSCTTTSCHHHHHHHHHHHHHH
T ss_pred HHHHhCCC-----------------CCEecCCccEeeCCeeEEEeecccCcchHHHhhhccccchHHHHHHHHHHHHHHH
Confidence 77666532 11122222222 45668999999999987764321 12345555555555544
Q ss_pred HHHHHhcCccccCCCCCCeEEccCCCCceEEEecccccccCH
Q 002031 279 AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 320 (977)
Q Consensus 279 l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 320 (977)
++.+|..|++|||+||.|||++.+ +.++|+|||+++.++.
T Consensus 128 L~yLH~~~iiHrDlKp~NILl~~~--~~~Kl~DFG~a~~~~~ 167 (287)
T d1opja_ 128 MEYLEKKNFIHRDLAARNCLVGEN--HLVKVADFGLSRLMTG 167 (287)
T ss_dssp HHHHHHTTCCCSCCSGGGEEECGG--GCEEECCCCCTTTCCS
T ss_pred HHHHHHCCcccCccccCeEEECCC--CcEEEccccceeecCC
Confidence 889999999999999999999866 8999999999987654
|
| >d1u59a_ d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Tyrosine-protein kinase ZAP-70 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.62 E-value=2.3e-16 Score=170.35 Aligned_cols=141 Identities=21% Similarity=0.251 Sum_probs=100.9
Q ss_pred ccccccccEEEEEEec---CCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCcHHH
Q 002031 125 PLATASIAQVHRATLV---DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSE 201 (977)
Q Consensus 125 piasaSigqV~~A~l~---~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~E 201 (977)
-||+|+||.||+|+.+ ++..||||+.+++.... +. -+|.+|
T Consensus 16 ~iG~G~fg~Vy~~~~~~~~~~~~vAvK~l~~~~~~~---~~---------------------------------~~~~~E 59 (285)
T d1u59a_ 16 ELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKA---DT---------------------------------EEMMRE 59 (285)
T ss_dssp EEECCTTEEEEEEEEC---CCEEEEEEEECSSCCHH---HH---------------------------------HHHHHH
T ss_pred EEecccCeEEEEEEEecCCCcEEEEEEEEChhcCHH---HH---------------------------------HHHHHH
Confidence 4999999999999864 45689999987654321 00 035667
Q ss_pred HHHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeeecCCceEEeeccCCCCCCChHHHHhcCCCHHHHHHHHHHHH--H
Q 002031 202 AENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQSSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--A 279 (977)
Q Consensus 202 a~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~--l 279 (977)
++.+.++++ ..-+.+=.+......+|||||++|++|.++.......++...+...+.++. +
T Consensus 60 ~~il~~l~H-----------------pnIv~l~g~~~~~~~~lvmE~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~gL 122 (285)
T d1u59a_ 60 AQIMHQLDN-----------------PYIVRLIGVCQAEALMLVMEMAGGGPLHKFLVGKREEIPVSNVAELLHQVSMGM 122 (285)
T ss_dssp HHHHHHCCC-----------------TTBCCEEEEEESSSEEEEEECCTTEEHHHHHTTCTTTSCHHHHHHHHHHHHHHH
T ss_pred HHHHHhCCC-----------------CCEeeEeeeeccCeEEEEEEeCCCCcHHHHhhccccCCCHHHHHHHHHHHHHHH
Confidence 777766532 111222222235567899999999999876432233466666666666655 8
Q ss_pred HHHHhcCccccCCCCCCeEEccCCCCceEEEecccccccCH
Q 002031 280 HQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 320 (977)
Q Consensus 280 ~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 320 (977)
..+|..|++|||+||.|||++.+ +.++|+|||+++.+..
T Consensus 123 ~ylH~~~iiHrDlKp~Nill~~~--~~~Kl~DFGla~~~~~ 161 (285)
T d1u59a_ 123 KYLEEKNFVHRDLAARNVLLVNR--HYAKISDFGLSKALGA 161 (285)
T ss_dssp HHHHHTTEECCCCSGGGEEEEET--TEEEECCCTTCEECTT
T ss_pred HHHHhCCeecCcCchhheeeccC--Cceeeccchhhhcccc
Confidence 88999999999999999999966 8999999999987653
|
| >d1phka_ d.144.1.7 (A:) gamma-subunit of glycogen phosphorylase kinase (Phk) {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: gamma-subunit of glycogen phosphorylase kinase (Phk) species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Probab=99.62 E-value=5.8e-16 Score=166.40 Aligned_cols=149 Identities=17% Similarity=0.166 Sum_probs=105.0
Q ss_pred cccccccccEEEEEEe-cCCCEEEEEEecCChhhhh-HhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCcHHH
Q 002031 124 TPLATASIAQVHRATL-VDGRQVVVKVQHQGIKTII-LEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSE 201 (977)
Q Consensus 124 ~piasaSigqV~~A~l-~~G~~VAVKv~~p~i~~~~-~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~E 201 (977)
+.||+|++|+||+|+. .+|+.||||+.+....... ..+.+ +.. -.+.+|
T Consensus 9 ~~iG~G~~g~V~~~~~~~~~~~~AvK~i~~~~~~~~~~~~~~-----------------------~~~------~~~~~E 59 (277)
T d1phka_ 9 EILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQ-----------------------ELR------EATLKE 59 (277)
T ss_dssp EEEEECSSEEEEEEEETTTTEEEEEEEEETTCSTTCCHHHHH-----------------------HHH------HHHHHH
T ss_pred eEEecCcCeEEEEEEECCCCCEEEEEEEecccccchhHHHHH-----------------------HHH------HHHHHH
Confidence 6799999999999997 4899999998764322111 11111 011 124567
Q ss_pred HHHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeee-cCCceEEeeccCCCCCCChHHHHhcCCCHHHHHHHHHHHH--
Q 002031 202 AENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY-- 278 (977)
Q Consensus 202 a~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~-- 278 (977)
+..+.++... ..-+.+-.++. ...-+|||||++|++|.++... ...++...+...+.+++
T Consensus 60 ~~~l~~l~~h----------------pnIv~~~~~~~~~~~~~ivmE~~~~g~L~~~l~~-~~~l~e~~~~~~~~qi~~a 122 (277)
T d1phka_ 60 VDILRKVSGH----------------PNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTE-KVTLSEKETRKIMRALLEV 122 (277)
T ss_dssp HHHHHHHTTC----------------TTBCCEEEEEECSSEEEEEEECCTTCBHHHHHHH-HSSCCHHHHHHHHHHHHHH
T ss_pred HHHHHHhcCC----------------CCeEEEEeecccCcceEEEEEcCCCchHHHHHHh-cCCCCHHHHHHHHHHHHHH
Confidence 7777777421 01122223333 3445899999999999887543 34567777666666655
Q ss_pred HHHHHhcCccccCCCCCCeEEccCCCCceEEEecccccccCH
Q 002031 279 AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 320 (977)
Q Consensus 279 l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 320 (977)
+..+|..|++|||+||+|||++.+ +.++|+|||++..+++
T Consensus 123 l~~lH~~~ivHrDlkp~Nill~~~--~~~kl~DFG~a~~~~~ 162 (277)
T d1phka_ 123 ICALHKLNIVHRDLKPENILLDDD--MNIKLTDFGFSCQLDP 162 (277)
T ss_dssp HHHHHHTTEECSCCSGGGEEECTT--CCEEECCCTTCEECCT
T ss_pred HHHHHHcCCcccccccceEEEcCC--CCeEEccchheeEccC
Confidence 889999999999999999999865 8999999999988765
|
| >d1jpaa_ d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: ephb2 receptor tyrosine kinase species: Mouse (Mus musculus) [TaxId: 10090]
Probab=99.61 E-value=2.6e-16 Score=171.12 Aligned_cols=143 Identities=20% Similarity=0.211 Sum_probs=91.3
Q ss_pred cccccccccEEEEEEec-CCC---EEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCcH
Q 002031 124 TPLATASIAQVHRATLV-DGR---QVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFN 199 (977)
Q Consensus 124 ~piasaSigqV~~A~l~-~G~---~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~ 199 (977)
+.||+|+||+||+|+++ +|+ .||||..++....... -+|.
T Consensus 32 ~~lG~G~fg~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~------------------------------------~~~~ 75 (299)
T d1jpaa_ 32 QVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQR------------------------------------RDFL 75 (299)
T ss_dssp EEEEECSSSEEEEEEECC---CCEEEEEEECCSSCCHHHH------------------------------------HHHH
T ss_pred eEEeeCCCeEEEEEEEeCCCCEEEEEEEEEECcccCHHHH------------------------------------HHHH
Confidence 67999999999999975 343 5888887654332110 0245
Q ss_pred HHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeee-cCCceEEeeccCCCCCCChHHHHhcCCCHHHHHHHHHHHH
Q 002031 200 SEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY 278 (977)
Q Consensus 200 ~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~ 278 (977)
+|++.+.+++| ..-|.+=.++. ....+|||||++|++|.++.......++...+...+.++.
T Consensus 76 ~E~~~l~~l~H-----------------pnIv~l~g~~~~~~~~~iv~Ey~~~g~L~~~~~~~~~~l~~~~~~~i~~qia 138 (299)
T d1jpaa_ 76 SEASIMGQFDH-----------------PNVIHLEGVVTKSTPVMIITEFMENGSLDSFLRQNDGQFTVIQLVGMLRGIA 138 (299)
T ss_dssp HHHHHHTTCCC-----------------TTBCCEEEEECSSSSCEEEEECCTTEEHHHHHHTTTTCSCHHHHHHHHHHHH
T ss_pred HHHHHHHhCCC-----------------CCCccEEEEEeeCCEEEEEEEecCCCcceeeeccccCCCCHHHHHHHHHHHH
Confidence 66666555422 11122222222 4567899999999999876443333456666666555554
Q ss_pred --HHHHHhcCccccCCCCCCeEEccCCCCceEEEecccccccCHH
Q 002031 279 --AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSSS 321 (977)
Q Consensus 279 --l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~~ 321 (977)
+..+|..|++||||||.|||++.+ +.++|+|||+++.+...
T Consensus 139 ~gl~yLH~~~iiHrDlKp~NILl~~~--~~~Kl~DFGla~~~~~~ 181 (299)
T d1jpaa_ 139 AGMKYLADMNYVHRDLAARNILVNSN--LVCKVSDFGLSRFLEDD 181 (299)
T ss_dssp HHHHHHHHTTCCCSCCCGGGEEECTT--CCEEECCC---------
T ss_pred HHHHHHhhCCCccCccccceEEECCC--CcEEECCcccceEccCC
Confidence 889999999999999999999865 89999999999877654
|
| >d1uwha_ d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: B-Raf kinase species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.61 E-value=1.7e-16 Score=170.46 Aligned_cols=139 Identities=15% Similarity=0.201 Sum_probs=96.5
Q ss_pred cccccccccEEEEEEecCCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCcHHHHH
Q 002031 124 TPLATASIAQVHRATLVDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEAE 203 (977)
Q Consensus 124 ~piasaSigqV~~A~l~~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea~ 203 (977)
+.||+|+||.||+|+++ ..||||+.+......- + .+ .|.+|++
T Consensus 14 ~~lG~G~fg~Vy~~~~~--~~vAvK~~~~~~~~~~--~-----------------------~~----------~~~~E~~ 56 (276)
T d1uwha_ 14 QRIGSGSFGTVYKGKWH--GDVAVKMLNVTAPTPQ--Q-----------------------LQ----------AFKNEVG 56 (276)
T ss_dssp SEEEECSSCEEEEEESS--SEEEEEECCCSSCCTT--H-----------------------HH----------HHHHHHH
T ss_pred EEEeeCCCcEEEEEEEC--CEEEEEEEEcccCCHH--H-----------------------HH----------HHHHHHH
Confidence 67999999999999864 4699999864321100 0 00 2456666
Q ss_pred HHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeee---cCCceEEeeccCCCCCCChHHHHhcCCCHHHHHHHHHHHH--
Q 002031 204 NTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ---SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY-- 278 (977)
Q Consensus 204 n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~---~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~-- 278 (977)
.+.++++ +.+ -+++. ....+|||||++|++|.+........++...+...+.++.
T Consensus 57 ~l~~l~H------------------pnI--v~~~~~~~~~~~~lv~Ey~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~g 116 (276)
T d1uwha_ 57 VLRKTRH------------------VNI--LLFMGYSTAPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQG 116 (276)
T ss_dssp HHTTCCC------------------TTB--CCEEEEECSSSCEEEEECCCEEEHHHHHHTSCCCCCHHHHHHHHHHHHHH
T ss_pred HHHhCCC------------------CCE--eeeeEEEeccEEEEEEecCCCCCHHHHHhhccCCCCHHHHHHHHHHHHHH
Confidence 6655432 121 13332 4556899999999999876432333466666666666655
Q ss_pred HHHHHhcCccccCCCCCCeEEccCCCCceEEEecccccccCHH
Q 002031 279 AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSSS 321 (977)
Q Consensus 279 l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~~ 321 (977)
+..+|..|++|||+||.|||++.+ +.++|+|||+++.++..
T Consensus 117 l~yLH~~~ivHrDlKp~NiLl~~~--~~~Kl~DFGla~~~~~~ 157 (276)
T d1uwha_ 117 MDYLHAKSIIHRDLKSNNIFLHED--LTVKIGDFGLATVKSRW 157 (276)
T ss_dssp HHHHHHTTCCCSCCCGGGEEEETT--SSEEECCCCCSCC----
T ss_pred HHHHhcCCEeccccCHHHEEEcCC--CCEEEccccceeecccc
Confidence 888999999999999999999865 89999999999877643
|
| >d1u5ra_ d.144.1.7 (A:) Serine/threonine protein kinase TAO2 {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Serine/threonine protein kinase TAO2 species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=99.61 E-value=3.9e-16 Score=170.45 Aligned_cols=152 Identities=16% Similarity=0.139 Sum_probs=105.4
Q ss_pred ChhhcccccCccccccccccEEEEEEe-cCCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhh
Q 002031 113 SMGGMFMDFVETPLATASIAQVHRATL-VDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKE 191 (977)
Q Consensus 113 ~~~~~f~~~d~~piasaSigqV~~A~l-~~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~ 191 (977)
++++.|+.+ +.||+|+||.||+|+. .+|+.||||+.+......- ...
T Consensus 12 dp~~~y~~l--~~lG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~~~~-~~~----------------------------- 59 (309)
T d1u5ra_ 12 DPEKLFSDL--REIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSN-EKW----------------------------- 59 (309)
T ss_dssp CHHHHEEEE--EEEEECSSSEEEEEEETTTTEEEEEEEEECCSSCHH-HHH-----------------------------
T ss_pred CcHHhcEee--EEEecCCCeEEEEEEECCCCcEEEEEEEchhhccCH-HHH-----------------------------
Confidence 466677665 5699999999999997 4899999998765322110 000
Q ss_pred cccccCcHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeee-cCCceEEeeccCCCCCCChHHHHhcCCCHHHH
Q 002031 192 APKELDFNSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAFGVNKQKV 270 (977)
Q Consensus 192 l~~Eld~~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l 270 (977)
-++.+|++.+.++.+ ..-+.+-.++. ....+|||||++|.++.... .....++...+
T Consensus 60 ----~~~~~Ei~il~~l~H-----------------pnIv~~~~~~~~~~~~~iv~E~~~~g~l~~~~-~~~~~l~e~~~ 117 (309)
T d1u5ra_ 60 ----QDIIKEVRFLQKLRH-----------------PNTIQYRGCYLREHTAWLVMEYCLGSASDLLE-VHKKPLQEVEI 117 (309)
T ss_dssp ----HHHHHHHHHHTTCCC-----------------TTBCCEEEEEEETTEEEEEEECCSEEHHHHHH-HHTSCCCHHHH
T ss_pred ----HHHHHHHHHHHHCCC-----------------CCEeeEEEEEEECCEEEEEEEecCCCchHHHH-HhCCCCCHHHH
Confidence 024456655554422 11223333333 45568999999998885442 33445677666
Q ss_pred HHHHHHHH--HHHHHhcCccccCCCCCCeEEccCCCCceEEEecccccccCH
Q 002031 271 VEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 320 (977)
Q Consensus 271 ~~~l~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 320 (977)
...+.+++ +..+|..|++|||+||.|||++.+ +.++|+|||++.....
T Consensus 118 ~~i~~qi~~aL~yLH~~~iiHrDiKp~NILl~~~--~~~Kl~DFG~a~~~~~ 167 (309)
T d1u5ra_ 118 AAVTHGALQGLAYLHSHNMIHRDVKAGNILLSEP--GLVKLGDFGSASIMAP 167 (309)
T ss_dssp HHHHHHHHHHHHHHHHTTCBCCCCSGGGEEEETT--TEEEECCCTTCBSSSS
T ss_pred HHHHHHHHHHHHHHHhCCEeccCCCcceEEECCC--CCEEEeecccccccCC
Confidence 66666655 888999999999999999999965 8999999999987654
|
| >d1fmka3 d.144.1.7 (A:249-533) c-src tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: c-src tyrosine kinase species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.61 E-value=3.3e-16 Score=169.01 Aligned_cols=138 Identities=17% Similarity=0.191 Sum_probs=100.8
Q ss_pred cccccccccEEEEEEecCCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCcHHHHH
Q 002031 124 TPLATASIAQVHRATLVDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEAE 203 (977)
Q Consensus 124 ~piasaSigqV~~A~l~~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea~ 203 (977)
+.||+|+||+||+|+++++++||||+.+.+... +-+|.+|+.
T Consensus 23 ~~iG~G~fg~Vy~~~~~~~~~vAiK~l~~~~~~--------------------------------------~~~~~~E~~ 64 (285)
T d1fmka3 23 VKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMS--------------------------------------PEAFLQEAQ 64 (285)
T ss_dssp EEEEECSSCEEEEEEETTTEEEEEEECCTTSSC--------------------------------------HHHHHHHHH
T ss_pred eEEeeCCCeEEEEEEECCCCEEEEEEECcccCC--------------------------------------HHHHHHHHH
Confidence 679999999999999988889999987643211 013567777
Q ss_pred HHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceee---ecCCceEEeeccCCCCCCChHHHHh-cCCCHHHHHHHHHHHH-
Q 002031 204 NTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVI---QSSETVLILEFMDGIRLNDCESLEA-FGVNKQKVVEEITRAY- 278 (977)
Q Consensus 204 n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~---~~~~~vLVmE~i~G~~L~~~~~~~~-~~~~~~~l~~~l~~~~- 278 (977)
.+.++++ + .|.+++ ...+.+|||||++|+++.+...... ..++...+...+.++.
T Consensus 65 ~l~~l~h------------------~--nIv~~~g~~~~~~~~lv~Ey~~~g~l~~~~~~~~~~~l~~~~~~~i~~~i~~ 124 (285)
T d1fmka3 65 VMKKLRH------------------E--KLVQLYAVVSEEPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIAS 124 (285)
T ss_dssp HHHHCCC------------------T--TBCCEEEEECSSSCEEEECCCTTCBHHHHHSHHHHTTCCHHHHHHHHHHHHH
T ss_pred HHHhccc------------------C--CEeEEEEEEecCCeEEEEEecCCCchhhhhhhcccccchHHHHHHHHHHHHH
Confidence 7766543 1 122333 2566799999999998876644332 3467777766666655
Q ss_pred -HHHHHhcCccccCCCCCCeEEccCCCCceEEEecccccccCHH
Q 002031 279 -AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSSS 321 (977)
Q Consensus 279 -l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~~ 321 (977)
+..+|..|++|||+||.||||+.+ +.++|+|||+++.+.+.
T Consensus 125 gl~~LH~~~ivH~DlKp~NIll~~~--~~~kl~DfGla~~~~~~ 166 (285)
T d1fmka3 125 GMAYVERMNYVHRDLRAANILVGEN--LVCKVADFGLARLIEDN 166 (285)
T ss_dssp HHHHHHHTTCCCSCCSGGGEEECGG--GCEEECCCCTTC-----
T ss_pred HHHHHhhhheecccccceEEEECCC--CcEEEcccchhhhccCC
Confidence 889999999999999999999866 89999999999877543
|
| >d1s9ja_ d.144.1.7 (A:) Dual specificity mitogen-activated protein kinase kinase 1, Mek1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Dual specificity mitogen-activated protein kinase kinase 1, Mek1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.61 E-value=1.7e-16 Score=174.45 Aligned_cols=141 Identities=20% Similarity=0.191 Sum_probs=96.0
Q ss_pred cccccccccEEEEEEec-CCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCcHHHH
Q 002031 124 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (977)
Q Consensus 124 ~piasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea 202 (977)
+.||+|+||.||+|+.+ +|+.||||+.+........ . .+.+|+
T Consensus 12 ~~iG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~------------------------------~------~~~~Ei 55 (322)
T d1s9ja_ 12 SELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIR------------------------------N------QIIREL 55 (322)
T ss_dssp EEEECCSSCCEEEEEETTTTEEEEEEEEECCCCTTHH------------------------------H------HHHHHG
T ss_pred EEEecCCCeEEEEEEECCCCcEEEEEEEChhhCHHHH------------------------------H------HHHHHH
Confidence 57999999999999974 7999999998654322111 0 122333
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeee-cCCceEEeeccCCCCCCChHHHHhcCCCHHHHHHHHHHHH--H
Q 002031 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--A 279 (977)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~--l 279 (977)
+.+.++++ ..-+.+=.++. .+..+|||||++|.+|.++.. +...++...+...+.+++ +
T Consensus 56 ~il~~l~H-----------------pnIv~l~~~~~~~~~~~iVmEy~~gg~L~~~l~-~~~~l~~~~~~~~~~qil~aL 117 (322)
T d1s9ja_ 56 QVLHECNS-----------------PYIVGFYGAFYSDGEISICMEHMDGGSLDQVLK-KAGRIPEQILGKVSIAVIKGL 117 (322)
T ss_dssp GGGGGCCC-----------------TTBCCEEEEEECSSEEEEEEECCTTEEHHHHHH-HHSSCCHHHHHHHHHHHHHHH
T ss_pred HHHHhCCC-----------------CCCCcEEEEEEECCEEEEEEEcCCCCcHHHHHh-hcCCCCHHHHHHHHHHHHHHH
Confidence 33332211 11122223333 455689999999999988753 233566666555555554 7
Q ss_pred HHHHh-cCccccCCCCCCeEEccCCCCceEEEecccccccCH
Q 002031 280 HQIYV-DGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 320 (977)
Q Consensus 280 ~~i~~-~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 320 (977)
..+|. +||+|||+||+|||++.+ |+++|+|||+++.+.+
T Consensus 118 ~yLH~~~~IiHRDiKP~NILl~~~--~~vkl~DFGla~~~~~ 157 (322)
T d1s9ja_ 118 TYLREKHKIMHRDVKPSNILVNSR--GEIKLCDFGVSGQLID 157 (322)
T ss_dssp HHHHHHHCCCCSCCSGGGEEECTT--CCEEECCCCCCHHHHH
T ss_pred HHHHHhCCEEccccCHHHeeECCC--CCEEEeeCCCccccCC
Confidence 78886 699999999999999865 8999999999976643
|
| >d1a06a_ d.144.1.7 (A:) Calmodulin-dependent protein kinase {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Calmodulin-dependent protein kinase species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=99.61 E-value=3.9e-16 Score=170.32 Aligned_cols=153 Identities=18% Similarity=0.171 Sum_probs=95.9
Q ss_pred ChhhcccccCccccccccccEEEEEEec-CCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhh
Q 002031 113 SMGGMFMDFVETPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKE 191 (977)
Q Consensus 113 ~~~~~f~~~d~~piasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~ 191 (977)
++.+.|+-. +.||+|++|.||+|+.+ +|+.||||+........
T Consensus 6 di~d~Y~~~--~~lG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~---------------------------------- 49 (307)
T d1a06a_ 6 DIRDIYDFR--DVLGTGAFSEVILAEDKRTQKLVAIKCIAKKALEG---------------------------------- 49 (307)
T ss_dssp CGGGTEEEE--EESBSGGGGGEEEEEETTTCCEEEEEEEEC---------------------------------------
T ss_pred CCccceEEE--EEEeeccCeEEEEEEECCCCCEEEEEEEchHHhhh----------------------------------
Confidence 455555543 57999999999999975 79999999876432110
Q ss_pred cccccCcHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeee-cCCceEEeeccCCCCCCChHHHHhcCCCHHHH
Q 002031 192 APKELDFNSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAFGVNKQKV 270 (977)
Q Consensus 192 l~~Eld~~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l 270 (977)
.+-.+.+|++.+.++.+ ..-+.+=.++. ....+|||||++|++|.+... ....++...+
T Consensus 50 --~~~~~~~Ei~il~~l~H-----------------pnIv~l~~~~~~~~~~~lvmE~~~gg~L~~~l~-~~~~l~e~~~ 109 (307)
T d1a06a_ 50 --KEGSMENEIAVLHKIKH-----------------PNIVALDDIYESGGHLYLIMQLVSGGELFDRIV-EKGFYTERDA 109 (307)
T ss_dssp -------CHHHHHHHTCCC-----------------TTBCCEEEEEECSSEEEEEECCCCSCBHHHHHH-TCSCCCHHHH
T ss_pred --HHHHHHHHHHHHHhCCC-----------------CCCCcEEEEEEECCEEEEEEeccCCCcHHHhhh-cccCCCHHHH
Confidence 01124456665554421 11122222333 455689999999999987642 2334666666
Q ss_pred HHHHHHHH--HHHHHhcCccccCCCCCCeEEcc-CCCCceEEEecccccccCHH
Q 002031 271 VEEITRAY--AHQIYVDGFFNGDPHPGNFLVSK-DPPHRPILLDFGLTKKLSSS 321 (977)
Q Consensus 271 ~~~l~~~~--l~~i~~~G~~H~D~hPgNIlv~~-~~~g~i~LiDFG~~~~l~~~ 321 (977)
...+.+++ +..+|..|++|||+||.|||+.. ++++.++|+|||+++.++..
T Consensus 110 ~~~~~qi~~al~ylH~~~iiHrDiKp~Nil~~~~~~~~~vkl~DFG~a~~~~~~ 163 (307)
T d1a06a_ 110 SRLIFQVLDAVKYLHDLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPG 163 (307)
T ss_dssp HHHHHHHHHHHHHHHHTTCCCSCCCGGGEEESSSSTTCCEEECCC---------
T ss_pred HHHHHHHHHHHHhhhhceeeeEEecccceeecccCCCceEEEeccceeEEccCC
Confidence 66666655 88899999999999999999964 23588999999999876543
|
| >d1uu3a_ d.144.1.7 (A:) 3-phosphoinositide dependent protein kinase-1 Pdk1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: 3-phosphoinositide dependent protein kinase-1 Pdk1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.60 E-value=5.1e-16 Score=167.76 Aligned_cols=145 Identities=16% Similarity=0.122 Sum_probs=98.4
Q ss_pred cccccccccEEEEEEe-cCCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCcHHHH
Q 002031 124 TPLATASIAQVHRATL-VDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (977)
Q Consensus 124 ~piasaSigqV~~A~l-~~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea 202 (977)
+.||+|++|+||+|+. .+|+.||||+.+.... ..+- .. -.+.+|.
T Consensus 14 ~~lG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~---~~~~---------------------~~----------~~~~~E~ 59 (288)
T d1uu3a_ 14 KILGEGSFSTVVLARELATSREYAIKILEKRHI---IKEN---------------------KV----------PYVTRER 59 (288)
T ss_dssp EEEEECSSCEEEEEEETTTCCEEEEEEEEHHHH---HHTT---------------------CH----------HHHHHHH
T ss_pred EEEeeCCCeEEEEEEECCCCCEEEEEEEehHHc---cCHH---------------------HH----------HHHHHHH
Confidence 6799999999999997 4799999998753210 0000 00 0244566
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeee-cCCceEEeeccCCCCCCChHHHHhcCCCHHHHHHHHHHHH--H
Q 002031 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--A 279 (977)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~--l 279 (977)
+.+.++.+ ..-+.+=..+. ....+|||||++|++|.++.. ....++...+...+.+++ +
T Consensus 60 ~il~~l~H-----------------pnIv~l~~~~~~~~~~~ivmEy~~gg~L~~~~~-~~~~l~e~~~~~~~~qi~~al 121 (288)
T d1uu3a_ 60 DVMSRLDH-----------------PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIR-KIGSFDETCTRFYTAEIVSAL 121 (288)
T ss_dssp HHHHHCCS-----------------TTBCCEEEEEECSSEEEEEECCCTTEEHHHHHH-HHSSCCHHHHHHHHHHHHHHH
T ss_pred HHHHHcCC-----------------CCeeEEEEEEEECCEEEEEEEccCCCCHHHhhh-ccCCCCHHHHHHHHHHHHHHH
Confidence 66555432 01122222222 345589999999999987643 234566666555555544 7
Q ss_pred HHHHhcCccccCCCCCCeEEccCCCCceEEEecccccccCHHH
Q 002031 280 HQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSSSM 322 (977)
Q Consensus 280 ~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~~~ 322 (977)
..+|..|++|||+||+|||++.+ +.++|+|||+++.++...
T Consensus 122 ~ylH~~~iiHrDiKp~NIll~~~--~~vkl~DFG~a~~~~~~~ 162 (288)
T d1uu3a_ 122 EYLHGKGIIHRDLKPENILLNED--MHIQITDFGTAKVLSPES 162 (288)
T ss_dssp HHHHHTTEECSCCSGGGEEECTT--SCEEECCCTTCEECC---
T ss_pred HhhccccEEcCcCCccccccCCC--ceEEecccccceecccCC
Confidence 88999999999999999999865 899999999999887544
|
| >d1k2pa_ d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Bruton's tyrosine kinase (Btk) species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.59 E-value=5.3e-16 Score=164.95 Aligned_cols=140 Identities=21% Similarity=0.197 Sum_probs=101.7
Q ss_pred cccccccccEEEEEEecCCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCcHHHHH
Q 002031 124 TPLATASIAQVHRATLVDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEAE 203 (977)
Q Consensus 124 ~piasaSigqV~~A~l~~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea~ 203 (977)
+.||+|+||.||+|+.+++++||||+.+.+-.. +-+|.+|..
T Consensus 10 ~~iG~G~fg~Vy~~~~~~~~~vAvK~l~~~~~~--------------------------------------~~~~~~Ev~ 51 (258)
T d1k2pa_ 10 KELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMS--------------------------------------EDEFIEEAK 51 (258)
T ss_dssp CCCCEETTEEEEEEEETTTEEEEEEEEESSSSC--------------------------------------HHHHHHHHH
T ss_pred EEEecCCCeEEEEEEECCCCEEEEEEECcCcCC--------------------------------------HHHHHHHHH
Confidence 579999999999999999999999998653210 013556766
Q ss_pred HHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeee-cCCceEEeeccCCCCCCChHHHHhcCCCHHHHHHHHHHHH--HH
Q 002031 204 NTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--AH 280 (977)
Q Consensus 204 n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~--l~ 280 (977)
.+.++.+ ..-+.+=.++. ...-++||||++|+++.+.............+...+.++. +.
T Consensus 52 ~~~~l~H-----------------pnIv~~~g~~~~~~~~~iv~Ey~~~g~l~~~~~~~~~~~~~~~~~~i~~qi~~gl~ 114 (258)
T d1k2pa_ 52 VMMNLSH-----------------EKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAME 114 (258)
T ss_dssp HHHTCCC-----------------TTBCCEEEEECCSSSEEEEEECCTTEEHHHHHHSGGGCCCHHHHHHHHHHHHHHHH
T ss_pred HHHhcCC-----------------CceeeEEEEEeeCCceEEEEEccCCCcHHHhhhccccCCcHHHHHHHHHHHHHHHH
Confidence 6665532 11122222222 3456899999999988776544445566666666555555 88
Q ss_pred HHHhcCccccCCCCCCeEEccCCCCceEEEecccccccCH
Q 002031 281 QIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 320 (977)
Q Consensus 281 ~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 320 (977)
.+|..|++|+|+||.|||++.+ +.++|+|||+++.+..
T Consensus 115 ~LH~~~iiH~dlk~~Nill~~~--~~~kl~DfG~a~~~~~ 152 (258)
T d1k2pa_ 115 YLESKQFLHRDLAARNCLVNDQ--GVVKVSDFGLSRYVLD 152 (258)
T ss_dssp HHHHTTBCCSCCSGGGEEECTT--CCEEECCCSSCCBCSS
T ss_pred HHhhcCcccccccceeEEEcCC--CcEEECcchhheeccC
Confidence 9999999999999999999865 8999999999987654
|
| >d1t4ha_ d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Protein kinase wnk1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.59 E-value=6.3e-16 Score=165.49 Aligned_cols=152 Identities=16% Similarity=0.087 Sum_probs=99.3
Q ss_pred ChhhcccccCccccccccccEEEEEEec-CCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhh
Q 002031 113 SMGGMFMDFVETPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKE 191 (977)
Q Consensus 113 ~~~~~f~~~d~~piasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~ 191 (977)
+.+..|..|++ -||+|+||.||+|+.+ +|+.||||+....-.. ..+.+
T Consensus 5 ~~~gry~~~~~-~iG~G~fg~Vy~~~~~~~~~~va~K~i~~~~~~--~~~~~---------------------------- 53 (270)
T d1t4ha_ 5 SNDGRFLKFDI-EIGRGSFKTVYKGLDTETTVEVAWCELQDRKLT--KSERQ---------------------------- 53 (270)
T ss_dssp CTTSCEEEEEE-EEEECSSEEEEEEEETTTCCEEEEEEEEGGGSC--HHHHH----------------------------
T ss_pred CCCCCEEEeee-EEecCcCcEEEEEEECCCCeEEEEEEEchhhCC--HHHHH----------------------------
Confidence 34444555653 5999999999999974 7999999986532110 00000
Q ss_pred cccccCcHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeeec-----CCceEEeeccCCCCCCChHHHHhcCCC
Q 002031 192 APKELDFNSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQS-----SETVLILEFMDGIRLNDCESLEAFGVN 266 (977)
Q Consensus 192 l~~Eld~~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~~-----~~~vLVmE~i~G~~L~~~~~~~~~~~~ 266 (977)
+|.+|++.+.++.+ ..-+.+=.++.+ ..-+|||||++|.+|.++.. +...++
T Consensus 54 -----~~~~E~~il~~l~H-----------------pnIv~~~~~~~~~~~~~~~~~ivmE~~~~g~L~~~l~-~~~~~~ 110 (270)
T d1t4ha_ 54 -----RFKEEAEMLKGLQH-----------------PNIVRFYDSWESTVKGKKCIVLVTELMTSGTLKTYLK-RFKVMK 110 (270)
T ss_dssp -----HHHHHHHHHTTCCC-----------------TTBCCEEEEEEEESSSCEEEEEEEECCCSCBHHHHHH-HHSSCC
T ss_pred -----HHHHHHHHHHhCCC-----------------CCeeeEEEEEeeccccCCEEEEEEeCCCCCcHHHHHh-cccccc
Confidence 24556665554422 111222222221 12379999999999987643 233466
Q ss_pred HHHHHHHHHHHH--HHHHHhcC--ccccCCCCCCeEEccCCCCceEEEecccccccC
Q 002031 267 KQKVVEEITRAY--AHQIYVDG--FFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 319 (977)
Q Consensus 267 ~~~l~~~l~~~~--l~~i~~~G--~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~ 319 (977)
...+...+.+++ +..+|..| ++||||||+|||++.+ ++.++|+|||+++...
T Consensus 111 ~~~~~~~~~qi~~gl~yLH~~~~~IiHrDiKp~NILl~~~-~~~~Kl~DFGla~~~~ 166 (270)
T d1t4ha_ 111 IKVLRSWCRQILKGLQFLHTRTPPIIHRDLKCDNIFITGP-TGSVKIGDLGLATLKR 166 (270)
T ss_dssp HHHHHHHHHHHHHHHHHHHTSSSCCCCSCCCGGGEEESST-TSCEEECCTTGGGGCC
T ss_pred HHHHHHHHHHHHHHHHHHHHCCCCEEeCCcChhhceeeCC-CCCEEEeecCcceecc
Confidence 665555555544 77899988 9999999999999742 4789999999987544
|
| >d1fota_ d.144.1.7 (A:) cAMP-dependent PK, catalytic subunit {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: cAMP-dependent PK, catalytic subunit species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=99.58 E-value=8.8e-16 Score=168.14 Aligned_cols=143 Identities=20% Similarity=0.248 Sum_probs=95.2
Q ss_pred cccccccccEEEEEEe-cCCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCcHHHH
Q 002031 124 TPLATASIAQVHRATL-VDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (977)
Q Consensus 124 ~piasaSigqV~~A~l-~~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea 202 (977)
+.||+|++|+||+|+. .+|+.||||+.+...... .. ..+ .+.+|+
T Consensus 10 ~~lG~G~fg~Vy~a~~~~~g~~vAvK~i~~~~~~~----~~--------------------~~~----------~~~~E~ 55 (316)
T d1fota_ 10 RTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVR----LK--------------------QVE----------HTNDER 55 (316)
T ss_dssp EEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHH----TT--------------------CHH----------HHHHHH
T ss_pred EEEecCcCcEEEEEEECCCCCEEEEEEEchHHccC----HH--------------------HHH----------HHHHHH
Confidence 6799999999999997 479999999975422100 00 000 134455
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeee-cCCceEEeeccCCCCCCChHHHHhcCCCHHHHHHHHHHHH--H
Q 002031 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--A 279 (977)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~--l 279 (977)
..+.++++ ..-+.+-.++. ....++||||++|.++..... .........+...+.+++ +
T Consensus 56 ~il~~l~H-----------------pnIv~~~~~~~~~~~~~ivmE~~~gg~l~~~~~-~~~~~~~~~~~~~~~qi~~al 117 (316)
T d1fota_ 56 LMLSIVTH-----------------PFIIRMWGTFQDAQQIFMIMDYIEGGELFSLLR-KSQRFPNPVAKFYAAEVCLAL 117 (316)
T ss_dssp HHHHSCCB-----------------TTBCCEEEEEECSSEEEEEECCCCSCBHHHHHH-HTSSCCHHHHHHHHHHHHHHH
T ss_pred HHHHhccC-----------------cChhheeeeEeeCCeeeeEeeecCCcccccccc-ccccccccHHHHHHHHHHHhh
Confidence 55444321 11122222333 455689999999998876543 223344444433333333 7
Q ss_pred HHHHhcCccccCCCCCCeEEccCCCCceEEEecccccccCH
Q 002031 280 HQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 320 (977)
Q Consensus 280 ~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 320 (977)
..+|..|++|||+||.|||++.+ |.++|+|||+++.+..
T Consensus 118 ~~lH~~~iiHrDiKp~NILl~~~--g~vkL~DFG~a~~~~~ 156 (316)
T d1fota_ 118 EYLHSKDIIYRDLKPENILLDKN--GHIKITDFGFAKYVPD 156 (316)
T ss_dssp HHHHTTTEECCCCCGGGEEECTT--SCEEECCCSSCEECSS
T ss_pred hhhccCcEEccccCchheeEcCC--CCEEEecCccceEecc
Confidence 88999999999999999999865 8999999999988754
|
| >d2java1 d.144.1.7 (A:3-271) Serine/threonine-protein kinase Nek2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Serine/threonine-protein kinase Nek2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.58 E-value=5.7e-16 Score=165.76 Aligned_cols=144 Identities=19% Similarity=0.216 Sum_probs=90.6
Q ss_pred cccccccccEEEEEEec-CCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCcHHHH
Q 002031 124 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (977)
Q Consensus 124 ~piasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea 202 (977)
+.||+|++|+||+|+.+ +|+.||||+.+......- +.+ .+.+|+
T Consensus 10 ~~iG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~--~~~---------------------------------~~~~E~ 54 (269)
T d2java1 10 YTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEA--EKQ---------------------------------MLVSEV 54 (269)
T ss_dssp EEEEECSSEEEEEEEETTTCCEEEEEEECCTTSCHH--HHH---------------------------------HHHHHH
T ss_pred EEEecCCCeEEEEEEECCCCCEEEEEEEChhhCCHH--HHH---------------------------------HHHHHH
Confidence 67999999999999974 799999998765421110 000 134455
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeee---cCCceEEeeccCCCCCCChHHH---HhcCCCHHHHHHHHHH
Q 002031 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ---SSETVLILEFMDGIRLNDCESL---EAFGVNKQKVVEEITR 276 (977)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~---~~~~vLVmE~i~G~~L~~~~~~---~~~~~~~~~l~~~l~~ 276 (977)
+.+.++.+ ..-+.+=.++. ...-+|||||++|++|.++... ....++...+...+.+
T Consensus 55 ~il~~l~H-----------------pnIv~~~~~~~~~~~~~~~ivmEy~~~g~L~~~i~~~~~~~~~l~e~~~~~i~~q 117 (269)
T d2java1 55 NLLRELKH-----------------PNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQ 117 (269)
T ss_dssp HHTTSCCC-----------------TTBCCEEEEEEC----CEEEEEECCTTEEHHHHHHHHHHHTCCCCHHHHHHHHHH
T ss_pred HHHHHCCC-----------------CCEeeEEEEEEeCCCCEEEEEEecCCCCcHHHHHHhccccCCCCCHHHHHHHHHH
Confidence 55443321 11122222222 2334799999999999887532 1234666666666666
Q ss_pred HH--HHHHHhcC-----ccccCCCCCCeEEccCCCCceEEEecccccccCHH
Q 002031 277 AY--AHQIYVDG-----FFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSSS 321 (977)
Q Consensus 277 ~~--l~~i~~~G-----~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~~ 321 (977)
+. ++.+|..| ++|||+||.|||++.+ +.++|+|||+++.++..
T Consensus 118 i~~al~ylH~~~~~~~~IiHrDiKp~NIll~~~--~~vkl~DFG~a~~~~~~ 167 (269)
T d2java1 118 LTLALKECHRRSDGGHTVLHRDLKPANVFLDGK--QNVKLGDFGLARILNHD 167 (269)
T ss_dssp HHHHHHHHHHHCC---------CCGGGEEECTT--SCEEECCHHHHHHC---
T ss_pred HHHHHHHHHHhcCCCCCEEeCcCchhhcCcCCC--CcEEEeeccceeecccC
Confidence 55 78889866 9999999999999865 89999999999887653
|
| >d1mqba_ d.144.1.7 (A:) epha2 receptor tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: epha2 receptor tyrosine kinase species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.57 E-value=1.1e-15 Score=164.89 Aligned_cols=143 Identities=18% Similarity=0.197 Sum_probs=95.8
Q ss_pred cccccccccEEEEEEecC-C----CEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCc
Q 002031 124 TPLATASIAQVHRATLVD-G----RQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDF 198 (977)
Q Consensus 124 ~piasaSigqV~~A~l~~-G----~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~ 198 (977)
+.||+|+||.||+|++++ + ..||||+.++.....- +.+|
T Consensus 13 ~~iG~G~fG~Vy~~~~~~~~~~~~~~vAvK~~~~~~~~~~------------------------------------~~~~ 56 (283)
T d1mqba_ 13 KVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQ------------------------------------RVDF 56 (283)
T ss_dssp EEEEECSSSEEEEEEEEC---CCEEEEEEEEECTTCCHHH------------------------------------HHHH
T ss_pred eEEeeCCCeEEEEEEEeCCCCEEEEEEEEEEECcccChHH------------------------------------HHHH
Confidence 679999999999999753 2 4799998865432210 1135
Q ss_pred HHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeee-cCCceEEeeccCCCCCCChHHHHhcCCCHHHHHHHHHHH
Q 002031 199 NSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRA 277 (977)
Q Consensus 199 ~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~ 277 (977)
.+|++.+.++++ ..-|.+-.++. ....++||||++|..+.+........++...+...+.++
T Consensus 57 ~~E~~il~~l~H-----------------~nIv~~~g~~~~~~~~~~v~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~~i 119 (283)
T d1mqba_ 57 LGEAGIMGQFSH-----------------HNIIRLEGVISKYKPMMIITEYMENGALDKFLREKDGEFSVLQLVGMLRGI 119 (283)
T ss_dssp HHHHHHHHTCCC-----------------TTBCCEEEEECSSSSEEEEEECCTTEEHHHHHHHTTTCSCHHHHHHHHHHH
T ss_pred HHHHHHHHhcCC-----------------CCEeeeeEEEecCCceEEEEEecccCcchhhhhcccccccHHHHHHHHHHH
Confidence 667776665532 11122222222 456689999999988877644333456666666666665
Q ss_pred H--HHHHHhcCccccCCCCCCeEEccCCCCceEEEecccccccCHH
Q 002031 278 Y--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSSS 321 (977)
Q Consensus 278 ~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~~ 321 (977)
. +..+|..|++|||+||+||||+.+ +.++|+|||+++.+...
T Consensus 120 ~~gl~~lH~~~iiHrDlKp~NILl~~~--~~~Kl~DFGla~~~~~~ 163 (283)
T d1mqba_ 120 AAGMKYLANMNYVHRDLAARNILVNSN--LVCKVSDFGLSRVLEDD 163 (283)
T ss_dssp HHHHHHHHHTTCCCSCCCGGGEEECTT--CCEEECCCCC-------
T ss_pred HHhhhhccccccccCccccceEEECCC--CeEEEcccchhhcccCC
Confidence 4 889999999999999999999865 89999999999877554
|
| >d1omwa3 d.144.1.7 (A:186-549) G-protein coupled receptor kinase 2 {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: G-protein coupled receptor kinase 2 species: Cow (Bos taurus) [TaxId: 9913]
Probab=99.57 E-value=1.6e-15 Score=169.36 Aligned_cols=145 Identities=15% Similarity=0.077 Sum_probs=95.7
Q ss_pred cccccccccEEEEEEec-CCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCcHHHH
Q 002031 124 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (977)
Q Consensus 124 ~piasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea 202 (977)
+.||+|+||.||+|+.+ +|+.||||+..+... ..+ ..+..+.+|.
T Consensus 10 ~~lG~G~fg~Vy~~~~~~t~~~vAiK~i~~~~~---~~~-------------------------------~~~~~~~~e~ 55 (364)
T d1omwa3 10 RIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRI---KMK-------------------------------QGETLALNER 55 (364)
T ss_dssp EEEEECSSCEEEEEEETTTCCEEEEEEEEHHHH---HHH-------------------------------TCHHHHHHHH
T ss_pred eEEecCCCeEEEEEEECCCCCEEEEEEEchHHc---chh-------------------------------hHHHHHHHHH
Confidence 67999999999999975 799999998753210 000 0011122333
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCC-eEeceeee-cCCceEEeeccCCCCCCChHHHHhcCCCHHHHHHHHHHHH--
Q 002031 203 ENTRIVSANLGCKNKHEDSNKKPAYEVD-VLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY-- 278 (977)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~-v~vP~v~~-~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~-- 278 (977)
..+..++. + +++. +.+-.++. ....+|||||++|.+|.++.. .........+...+.+++
T Consensus 56 ~~~~~l~~-~--------------~hpnIv~l~~~~~~~~~~~ivmE~~~gg~L~~~l~-~~~~~~e~~~~~~~~qi~~a 119 (364)
T d1omwa3 56 IMLSLVST-G--------------DCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLS-QHGVFSEADMRFYAAEIILG 119 (364)
T ss_dssp HHHHHHSS-S--------------CCTTBCCEEEEEECSSEEEEEECCCCSCBHHHHHH-HHCSCCHHHHHHHHHHHHHH
T ss_pred HHHHHHhc-C--------------CCCcEEEEEEEEEECCEEEEEEEecCCCcHHHHHH-hcccccHHHHHHHHHHHHHH
Confidence 33333221 1 1111 22222222 455689999999999987643 233455555555555544
Q ss_pred HHHHHhcCccccCCCCCCeEEccCCCCceEEEecccccccCH
Q 002031 279 AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 320 (977)
Q Consensus 279 l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 320 (977)
+..+|..|++|||+||+|||++.+ |.++|+|||+++.++.
T Consensus 120 L~ylH~~~iiHrDlKP~NILl~~~--g~iKl~DFGla~~~~~ 159 (364)
T d1omwa3 120 LEHMHNRFVVYRDLKPANILLDEH--GHVRISDLGLACDFSK 159 (364)
T ss_dssp HHHHHHTTEECCCCSGGGEEECSS--SCEEECCCTTCEECSS
T ss_pred HHHHHHCCccceeeccceeEEcCC--CcEEEeeeceeeecCC
Confidence 888999999999999999999865 8999999999987754
|
| >d1o6la_ d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Pkb kinase (Akt-2) species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.56 E-value=2.5e-15 Score=165.83 Aligned_cols=143 Identities=15% Similarity=0.118 Sum_probs=96.1
Q ss_pred cccccccccEEEEEEe-cCCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCcHHHH
Q 002031 124 TPLATASIAQVHRATL-VDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (977)
Q Consensus 124 ~piasaSigqV~~A~l-~~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea 202 (977)
+.||.|++|+||+|+. .+|+.||||+.+...... .+ ..-.+.+|.
T Consensus 11 ~~lG~G~fg~V~~~~~~~~~~~~AiK~i~k~~~~~--~~--------------------------------~~~~~~~E~ 56 (337)
T d1o6la_ 11 KLLGKGTFGKVILVREKATGRYYAMKILRKEVIIA--KD--------------------------------EVAHTVTES 56 (337)
T ss_dssp EEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHH--TT--------------------------------CHHHHHHHH
T ss_pred EEEecCcCeEEEEEEECCCCCEEEEEEEchhhccC--HH--------------------------------HHHHHHHHH
Confidence 5799999999999997 489999999975321000 00 000134455
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeee-cCCceEEeeccCCCCCCChHHHHhcCCCHHHHHHHHHHHH--H
Q 002031 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--A 279 (977)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~--l 279 (977)
..+.++.+ ..-+.+=.++. ....++||||++|++|.+... ....++...+...+.+++ +
T Consensus 57 ~il~~l~h-----------------p~Iv~l~~~~~~~~~~~iv~ey~~gg~L~~~~~-~~~~~~e~~~~~~~~qil~al 118 (337)
T d1o6la_ 57 RVLQNTRH-----------------PFLTALKYAFQTHDRLCFVMEYANGGELFFHLS-RERVFTEERARFYGAEIVSAL 118 (337)
T ss_dssp HHHHSCCC-----------------TTBCCEEEEEECSSEEEEEEECCTTCBHHHHHH-HHSCCCHHHHHHHHHHHHHHH
T ss_pred HHHHhCCC-----------------CCEEEEEeeeccccccccceeccCCCchhhhhh-cccCCcHHHHHHHHHHHhhhh
Confidence 54443321 11122222232 345689999999999977643 234455555554444544 8
Q ss_pred HHHHhcCccccCCCCCCeEEccCCCCceEEEecccccccCH
Q 002031 280 HQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 320 (977)
Q Consensus 280 ~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 320 (977)
+.+|..|++|||+||.|||++.+ |.++|+|||+++.+..
T Consensus 119 ~ylH~~~iiHRDlKP~NILl~~~--g~vkl~DFG~a~~~~~ 157 (337)
T d1o6la_ 119 EYLHSRDVVYRDIKLENLMLDKD--GHIKITDFGLCKEGIS 157 (337)
T ss_dssp HHHHHTTCBCCCCCGGGEEECTT--SCEEECCCTTCBCSCC
T ss_pred hhhhhcCccccccCHHHeEecCC--CCEEEeeccccccccc
Confidence 88999999999999999999865 8999999999987643
|
| >d1csna_ d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Casein kinase-1, CK1 species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]
Probab=99.55 E-value=2e-15 Score=163.48 Aligned_cols=138 Identities=19% Similarity=0.308 Sum_probs=96.5
Q ss_pred cccccccccEEEEEEec-CCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCcHHHH
Q 002031 124 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (977)
Q Consensus 124 ~piasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea 202 (977)
+.||+|+||+||+|+.+ +|+.||||+...... .-.+++|.
T Consensus 11 ~~iG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~---------------------------------------~~~~~~e~ 51 (293)
T d1csna_ 11 RRIGEGSFGVIFEGTNLLNNQQVAIKFEPRRSD---------------------------------------APQLRDEY 51 (293)
T ss_dssp EEEEECSSCEEEEEEETTTTEEEEEEEEECCTT---------------------------------------SCCHHHHH
T ss_pred EEEecCCCeEEEEEEECCCCCEEEEEEEccccC---------------------------------------cHHHHHHH
Confidence 57999999999999974 799999998743211 01234555
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeee----cCCceEEeeccCCCCCCChHHHHhcCCCHHHHHHHHHHHH
Q 002031 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ----SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY 278 (977)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~----~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~ 278 (977)
+.+..+.+. -.+|.++. ....++||||+ |.+|.+........+....+...+.+++
T Consensus 52 ~~~~~l~~~-------------------~~i~~~~~~~~~~~~~~~vme~~-~~~l~~~~~~~~~~~~~~~~~~i~~q~~ 111 (293)
T d1csna_ 52 RTYKLLAGC-------------------TGIPNVYYFGQEGLHNVLVIDLL-GPSLEDLLDLCGRKFSVKTVAMAAKQML 111 (293)
T ss_dssp HHHHHTTTC-------------------TTCCCEEEEEEETTEEEEEEECC-CCBHHHHHHHTTTCCCHHHHHHHHHHHH
T ss_pred HHHHHhcCC-------------------CCCCEEEEEeecCCccEEEEEec-CCCHHHHHHhhccchhhHHHHHHHHHHH
Confidence 555554321 12333332 56679999999 5677666443334466666655555544
Q ss_pred --HHHHHhcCccccCCCCCCeEEccC---CCCceEEEecccccccCH
Q 002031 279 --AHQIYVDGFFNGDPHPGNFLVSKD---PPHRPILLDFGLTKKLSS 320 (977)
Q Consensus 279 --l~~i~~~G~~H~D~hPgNIlv~~~---~~g~i~LiDFG~~~~l~~ 320 (977)
++.+|..|++|||+||+|||++.+ .++.++|+|||+++.+.+
T Consensus 112 ~~l~~lH~~giiHrDiKp~Nili~~~~~~~~~~vkl~DFG~a~~~~~ 158 (293)
T d1csna_ 112 ARVQSIHEKSLVYRDIKPDNFLIGRPNSKNANMIYVVDFGMVKFYRD 158 (293)
T ss_dssp HHHHHHHTTTEECCCCCGGGEEECCSSSTTTTCEEECCCTTCEESBC
T ss_pred HHHHHHHHCCceeccCCccceeecCcccccCCceEEcccceeEEccc
Confidence 889999999999999999999742 247899999999987643
|
| >d3bqca1 d.144.1.7 (A:3-330) Protein kinase CK2, alpha subunit {Rattus norvegicus [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Protein kinase CK2, alpha subunit species: Rattus norvegicus [TaxId: 10116]
Probab=99.55 E-value=5.6e-15 Score=162.57 Aligned_cols=136 Identities=15% Similarity=0.221 Sum_probs=95.8
Q ss_pred cccccccccEEEEEEe-cCCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCcHHHH
Q 002031 124 TPLATASIAQVHRATL-VDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (977)
Q Consensus 124 ~piasaSigqV~~A~l-~~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea 202 (977)
+.||.|+||+||+|+. .+|+.||||+.++.-.+. +.+|+
T Consensus 41 ~~LG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~----------------------------------------~~~Ei 80 (328)
T d3bqca1 41 RKLGRGKYSEVFEAINITNNEKVVVKILKPVKKKK----------------------------------------IKREI 80 (328)
T ss_dssp EEEEECSSEEEEEEEETTTTEEEEEEEECSSCHHH----------------------------------------HHHHH
T ss_pred EEEecCcCeEEEEEEECCCCCEEEEEEECHHHHHH----------------------------------------HHHHH
Confidence 6799999999999997 589999999987643322 23354
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeee---cCCceEEeeccCCCCCCChHHHHhcCCCHHHHHHHHHHHH-
Q 002031 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ---SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY- 278 (977)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~---~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~- 278 (977)
..+..+.+. ..-+.+-.++. ....++||||++|.+|.... ..++...+...+.+++
T Consensus 81 ~il~~l~~h----------------pnIv~~~~~~~~~~~~~~~~v~e~~~~~~L~~~~----~~l~e~~i~~i~~qil~ 140 (328)
T d3bqca1 81 KILENLRGG----------------PNIITLADIVKDPVSRTPALVFEHVNNTDFKQLY----QTLTDYDIRFYMYEILK 140 (328)
T ss_dssp HHHHHHTTS----------------TTBCCEEEEEECTTTCSEEEEEECCCSCBGGGTT----TSCCHHHHHHHHHHHHH
T ss_pred HHHHhccCC----------------CCCcEEEEEEEecCCCceeEEEeecCCCcHHHHh----cCCCHHHHHHHHHHHHH
Confidence 444444210 01122222222 23468999999999887652 2456666655555555
Q ss_pred -HHHHHhcCccccCCCCCCeEEccCCCCceEEEecccccccCH
Q 002031 279 -AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 320 (977)
Q Consensus 279 -l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 320 (977)
+..+|..||+|||+||+||||+.+ ++.++|+|||++..+.+
T Consensus 141 aL~~LH~~gIvHrDiKp~NILi~~~-~~~vkl~DFG~a~~~~~ 182 (328)
T d3bqca1 141 ALDYCHSMGIMHRDVKPHNVMIDHE-HRKLRLIDWGLAEFYHP 182 (328)
T ss_dssp HHHHHHHTTEECCCCSGGGEEEETT-TTEEEECCGGGCEECCT
T ss_pred HHHHHhhcccccccccccceEEcCC-CCeeeecccccceeccC
Confidence 889999999999999999999865 35699999999987754
|
| >d1jksa_ d.144.1.7 (A:) Death-associated protein kinase, Dap {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Death-associated protein kinase, Dap species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.55 E-value=2.2e-15 Score=163.17 Aligned_cols=157 Identities=18% Similarity=0.198 Sum_probs=104.7
Q ss_pred ChhhcccccCccccccccccEEEEEEe-cCCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhh
Q 002031 113 SMGGMFMDFVETPLATASIAQVHRATL-VDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKE 191 (977)
Q Consensus 113 ~~~~~f~~~d~~piasaSigqV~~A~l-~~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~ 191 (977)
++.+.|+-. +.||+|++|.||+|+. .+|+.||||+.......... ..
T Consensus 7 ~i~d~Y~~~--~~lG~G~fg~Vy~~~~~~~~~~~AvK~i~~~~~~~~~---------------------~~--------- 54 (293)
T d1jksa_ 7 NVDDYYDTG--EELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSR---------------------RG--------- 54 (293)
T ss_dssp CGGGTEEEE--EEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSTTCS---------------------SS---------
T ss_pred CcccCEEEe--EEEecCCCeEEEEEEECCCCCEEEEEEEEhhhcchhh---------------------hh---------
Confidence 344444433 5699999999999997 48999999987543211000 00
Q ss_pred cccccCcHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeee-cCCceEEeeccCCCCCCChHHHHhcCCCHHHH
Q 002031 192 APKELDFNSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAFGVNKQKV 270 (977)
Q Consensus 192 l~~Eld~~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l 270 (977)
...-++.+|++.+.++.+ ..-+.+=.++. ....+|||||++|.+|.++.. ....++...+
T Consensus 55 -~~~~~~~~E~~il~~l~H-----------------pnIv~~~~~~~~~~~~~iv~E~~~gg~L~~~i~-~~~~l~~~~~ 115 (293)
T d1jksa_ 55 -VSREDIEREVSILKEIQH-----------------PNVITLHEVYENKTDVILILELVAGGELFDFLA-EKESLTEEEA 115 (293)
T ss_dssp -BCHHHHHHHHHHHHHCCC-----------------TTBCCEEEEEECSSEEEEEEECCCSCBHHHHHH-HHSSCCHHHH
T ss_pred -HHHHHHHHHHHHHHhCCC-----------------CCCCcEEEEEEECCEEEEEEEcCCCccccchhc-cccccchhHH
Confidence 001135567766666532 11122223333 455689999999999988743 2345676666
Q ss_pred HHHHHHHH--HHHHHhcCccccCCCCCCeEEccCCC--CceEEEecccccccCH
Q 002031 271 VEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPP--HRPILLDFGLTKKLSS 320 (977)
Q Consensus 271 ~~~l~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~--g~i~LiDFG~~~~l~~ 320 (977)
...+.+++ +..+|..|++|||+||.|||++.++. ..++|+|||++..++.
T Consensus 116 ~~~~~qi~~al~yLH~~~ivHrDiKp~Nill~~~~~~~~~vkl~DfG~a~~~~~ 169 (293)
T d1jksa_ 116 TEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDF 169 (293)
T ss_dssp HHHHHHHHHHHHHHHHTTEECCCCSGGGEEESCSSSSSCCEEECCCTTCEECTT
T ss_pred HHHHHHHHHHHHhhhhcceeecccccceEEEecCCCcccceEecchhhhhhcCC
Confidence 65555544 88899999999999999999986521 2599999999988754
|
| >d1rdqe_ d.144.1.7 (E:) cAMP-dependent PK, catalytic subunit {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: cAMP-dependent PK, catalytic subunit species: Mouse (Mus musculus) [TaxId: 10090]
Probab=99.55 E-value=3.1e-15 Score=166.12 Aligned_cols=143 Identities=16% Similarity=0.163 Sum_probs=98.5
Q ss_pred cccccccccEEEEEEec-CCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCcHHHH
Q 002031 124 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (977)
Q Consensus 124 ~piasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea 202 (977)
+.||+|++|.||+|+.+ +|+.||||+.+.... .+... + -.+.+|.
T Consensus 47 ~~lG~G~fg~Vy~a~~~~~g~~~AvK~i~~~~~----~~~~~--------------------~----------~~~~~E~ 92 (350)
T d1rdqe_ 47 KTLGTGSFGRVMLVKHKESGNHYAMKILDKQKV----VKLKQ--------------------I----------EHTLNEK 92 (350)
T ss_dssp EEEEECSSCEEEEEEETTTCCEEEEEEEEHHHH----HHTTC--------------------H----------HHHHHHH
T ss_pred EEeecCcCcEEEEEEECCCCCEEEEEEEchHHc----cCHHH--------------------H----------HHHHHHH
Confidence 67999999999999984 899999998753211 00000 0 0134455
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeee-cCCceEEeeccCCCCCCChHHHHhcCCCHHHHHHHHHHHH--H
Q 002031 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--A 279 (977)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~--l 279 (977)
+.+..+.+ ..-+.+-.++. ....++||||+.|.+|.+... ....++...+...+.+++ +
T Consensus 93 ~il~~l~h-----------------pnIv~~~~~~~~~~~~~~v~e~~~~g~l~~~l~-~~~~l~e~~~~~i~~qi~~aL 154 (350)
T d1rdqe_ 93 RILQAVNF-----------------PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLR-RIGRFSEPHARFYAAQIVLTF 154 (350)
T ss_dssp HHHTTCCC-----------------TTBCCEEEEEECSSEEEEEEECCTTCBHHHHHH-HHCCCCHHHHHHHHHHHHHHH
T ss_pred HHHHHcCC-----------------CcEeecccccccccccccccccccccchhhhHh-hcCCCCHHHHHHHHHHHHHHH
Confidence 54443321 11122222333 455689999999999876643 334567666666666655 8
Q ss_pred HHHHhcCccccCCCCCCeEEccCCCCceEEEecccccccCH
Q 002031 280 HQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 320 (977)
Q Consensus 280 ~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 320 (977)
..+|..|++||||||.|||++.+ |.++|+|||+++.+..
T Consensus 155 ~yLH~~~iiHRDIKP~NILl~~~--g~ikL~DFG~a~~~~~ 193 (350)
T d1rdqe_ 155 EYLHSLDLIYRDLKPENLLIDQQ--GYIQVTDFGFAKRVKG 193 (350)
T ss_dssp HHHHHTTEECCCCSGGGEEECTT--SCEEECCCTTCEECSS
T ss_pred HHHHhCCEecCcCCHHHcccCCC--CCEEeeeceeeeeccc
Confidence 89999999999999999999865 8999999999988754
|
| >d1ua2a_ d.144.1.7 (A:) Cell division protein kinase 7, CDK7 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cell division protein kinase 7, CDK7 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.55 E-value=1.1e-15 Score=166.00 Aligned_cols=145 Identities=17% Similarity=0.159 Sum_probs=92.2
Q ss_pred cccccccccEEEEEEec-CCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCcHHHH
Q 002031 124 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (977)
Q Consensus 124 ~piasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea 202 (977)
+.||+|+||+||+|+.+ +|+.||||+.+........ +++ +-.+.+|+
T Consensus 4 ~~lG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~--------------------------~~~------~~~~~~Ei 51 (299)
T d1ua2a_ 4 DFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAK--------------------------DGI------NRTALREI 51 (299)
T ss_dssp EEEEEETTEEEEEEECSSCCSEEEEEEC--------------------------------------------CTHHHHHH
T ss_pred eEeccCcCeEEEEEEECCCCcEEEEEEEehhhhhhhh--------------------------HHH------HHHHHHHH
Confidence 45999999999999974 7999999987543211100 000 11245566
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeee-cCCceEEeeccCCCCCCChHHHHhcCCCHHHHHHHHHHHH--H
Q 002031 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--A 279 (977)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~--l 279 (977)
..+.++.+ ..-+.+-.++. .+.-+|||||++|..+..+.. ....++...+...+.+++ +
T Consensus 52 ~il~~l~h-----------------pnIv~~~~~~~~~~~~~ivmE~~~~~~~~~~~~-~~~~l~~~~~~~~~~qil~aL 113 (299)
T d1ua2a_ 52 KLLQELSH-----------------PNIIGLLDAFGHKSNISLVFDFMETDLEVIIKD-NSLVLTPSHIKAYMLMTLQGL 113 (299)
T ss_dssp HHHHHCCC-----------------TTBCCEEEEECCTTCCEEEEECCSEEHHHHHTT-CCSSCCSSHHHHHHHHHHHHH
T ss_pred HHHHhCCC-----------------CCEeEEEeeeccCCceeehhhhhcchHHhhhhh-cccCCCHHHHHHHHHHHHHHH
Confidence 66555432 11222323333 566789999999876544321 122244344444444433 8
Q ss_pred HHHHhcCccccCCCCCCeEEccCCCCceEEEecccccccCH
Q 002031 280 HQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 320 (977)
Q Consensus 280 ~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 320 (977)
+.+|..|++|||+||+|||++.+ +.++|+|||++..+..
T Consensus 114 ~~lH~~~iiHrDiKp~NIli~~~--~~~KL~DFG~a~~~~~ 152 (299)
T d1ua2a_ 114 EYLHQHWILHRDLKPNNLLLDEN--GVLKLADFGLAKSFGS 152 (299)
T ss_dssp HHHHHTTCCCCCCCGGGEEECTT--CCEEECCCGGGSTTTS
T ss_pred HHhhccceecccCCcceEEecCC--CccccccCccccccCC
Confidence 88999999999999999999865 8999999999977653
|
| >d1o6ya_ d.144.1.7 (A:) Mycobacterial protein kinase PknB, catalytic domain {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Mycobacterial protein kinase PknB, catalytic domain species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=99.55 E-value=3.7e-15 Score=160.06 Aligned_cols=144 Identities=22% Similarity=0.324 Sum_probs=99.4
Q ss_pred cccccccccEEEEEEe-cCCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCcHHHH
Q 002031 124 TPLATASIAQVHRATL-VDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (977)
Q Consensus 124 ~piasaSigqV~~A~l-~~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea 202 (977)
+.||+|++|.||+|+. .+|+.||||+.++..... -.. ...|.+|+
T Consensus 13 ~~lG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~----~~~------------------------------~~~~~~E~ 58 (277)
T d1o6ya_ 13 EILGFGGMSEVHLARDLRLHRDVAVKVLRADLARD----PSF------------------------------YLRFRREA 58 (277)
T ss_dssp EEEEECSSEEEEEEEETTTTEEEEEEEECSTTTTC----HHH------------------------------HHHHHHHH
T ss_pred EEEeeCCCeEEEEEEECCCCCEEEEEEEchhhccC----HHH------------------------------HHHHHHHH
Confidence 6899999999999997 589999999987653211 000 01245566
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeee-cC----CceEEeeccCCCCCCChHHHHhcCCCHHHHHHHHHHH
Q 002031 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SS----ETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRA 277 (977)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~----~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~ 277 (977)
+.+.++.+ ...+.+-.++. .. ..+|||||++|.+|.+... ....++...+...+.++
T Consensus 59 ~~l~~~~h-----------------pniv~~~~~~~~~~~~~~~~~lvmE~~~g~~L~~~~~-~~~~l~~~~~~~i~~qi 120 (277)
T d1o6ya_ 59 QNAAALNH-----------------PAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVH-TEGPMTPKRAIEVIADA 120 (277)
T ss_dssp HHHHTCCC-----------------TTBCCEEEEEEEECSSSEEEEEEEECCCEEEHHHHHH-HHCSCCHHHHHHHHHHH
T ss_pred HHHHhcCC-----------------CCCCcccceeeeccCCCceEEEEEECCCCCEehhhhc-ccCCCCHHHHHHHHHHH
Confidence 66554322 11122222222 11 2479999999999887643 33356776666666665
Q ss_pred H--HHHHHhcCccccCCCCCCeEEccCCCCceEEEecccccccCHH
Q 002031 278 Y--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSSS 321 (977)
Q Consensus 278 ~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~~ 321 (977)
+ +..+|..|++|||+||+|||++.+ +.++++|||.+..+...
T Consensus 121 ~~al~~lH~~~iiHrDiKP~NIll~~~--~~~~l~d~~~~~~~~~~ 164 (277)
T d1o6ya_ 121 CQALNFSHQNGIIHRDVKPANIMISAT--NAVKVMDFGIARAIADS 164 (277)
T ss_dssp HHHHHHHHHTTEECCCCSGGGEEEETT--SCEEECCCTTCEECC--
T ss_pred HHHHHHHHhCCccCccccCcccccCcc--ccceeehhhhhhhhccc
Confidence 5 889999999999999999999965 88999999998876543
|
| >d1rjba_ d.144.1.7 (A:) Fl cytokine receptor {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Fl cytokine receptor species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.53 E-value=5.9e-15 Score=162.23 Aligned_cols=142 Identities=18% Similarity=0.124 Sum_probs=94.2
Q ss_pred cccccccccEEEEEEecC-C-----CEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccC
Q 002031 124 TPLATASIAQVHRATLVD-G-----RQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELD 197 (977)
Q Consensus 124 ~piasaSigqV~~A~l~~-G-----~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld 197 (977)
+.||+|+||.||+|+.+. + ..||||+........ ..-.
T Consensus 43 ~~lG~G~fG~Vy~a~~~~~~~~~~~~~vavK~~~~~~~~~------------------------------------~~~~ 86 (325)
T d1rjba_ 43 KVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSS------------------------------------EREA 86 (325)
T ss_dssp EEEEECSSEEEEEEEEESCSSSSCEEEEEEEEECC------------------------------------------CHH
T ss_pred eEEeeCCCeEEEEEEEcCCCcccceeEEEEEEeccccCHH------------------------------------HHHH
Confidence 679999999999999742 2 369999876532211 0113
Q ss_pred cHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCC-CeEeceeee-cCCceEEeeccCCCCCCChHHHHh-------------
Q 002031 198 FNSEAENTRIVSANLGCKNKHEDSNKKPAYEV-DVLIPEVIQ-SSETVLILEFMDGIRLNDCESLEA------------- 262 (977)
Q Consensus 198 ~~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~-~v~vP~v~~-~~~~vLVmE~i~G~~L~~~~~~~~------------- 262 (977)
+.+|...+.++.+ ++ -|.+=.++. ....+|||||++|++|.++.....
T Consensus 87 ~~~E~~~l~~l~~-----------------HpnIv~l~~~~~~~~~~~lv~Ey~~~g~L~~~l~~~~~~~~~~~~~~~~~ 149 (325)
T d1rjba_ 87 LMSELKMMTQLGS-----------------HENIVNLLGACTLSGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQ 149 (325)
T ss_dssp HHHHHHHHHHHCC-----------------CTTBCCEEEEECSSSSCEEEEECCTTCBHHHHHHTTTTCC----------
T ss_pred HHHHHHHHHHhcC-----------------CCcEeEEEEEEeeCCeEEEEEEcCCCCcHHHHHHhccCCCcchhhhhccc
Confidence 4556666665521 11 122222222 456789999999999987643211
Q ss_pred ---------cCCCHHHHHHHHHHHH--HHHHHhcCccccCCCCCCeEEccCCCCceEEEecccccccCH
Q 002031 263 ---------FGVNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 320 (977)
Q Consensus 263 ---------~~~~~~~l~~~l~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 320 (977)
..++...+...+.++. +..+|..|++||||||.|||++.+ +.++|+|||+++....
T Consensus 150 ~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~IiHRDlKp~Nill~~~--~~~Kl~DFGla~~~~~ 216 (325)
T d1rjba_ 150 KRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEFKSCVHRDLAARNVLVTHG--KVVKICDFGLARDIMS 216 (325)
T ss_dssp -----------CCHHHHHHHHHHHHHHHHHHHHTTEEETTCSGGGEEEETT--TEEEECCCGGGSCGGG
T ss_pred cccccccccCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCchhccccccC--CeEEEeeccccccccC
Confidence 1234445555555544 888999999999999999999865 8999999999876643
|
| >d1mp8a_ d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Focal adhesion kinase 1 (fak) species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.53 E-value=6.6e-15 Score=157.69 Aligned_cols=143 Identities=18% Similarity=0.190 Sum_probs=91.7
Q ss_pred cccccccccEEEEEEecC----CCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCcH
Q 002031 124 TPLATASIAQVHRATLVD----GRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFN 199 (977)
Q Consensus 124 ~piasaSigqV~~A~l~~----G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~ 199 (977)
+.||+|+||+||+|+... +..||||+.+........ -.|.
T Consensus 13 ~~iG~G~fg~Vy~a~~~~~~~~~~~vaik~~~~~~~~~~~------------------------------------~~~~ 56 (273)
T d1mp8a_ 13 RCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVR------------------------------------EKFL 56 (273)
T ss_dssp EEEEECSSSEEEEEEECCC--CCEEEEEEECTTTTSHHHH------------------------------------HHHH
T ss_pred EEEeeCCCcEEEEEEEecCCceeEEEEEEEeccccCHHHH------------------------------------HHHH
Confidence 579999999999998742 356888877543221100 0245
Q ss_pred HHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeeecCCceEEeeccCCCCCCChHHHHhcCCCHHHHHHHHHHHH-
Q 002031 200 SEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQSSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY- 278 (977)
Q Consensus 200 ~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~- 278 (977)
+|+..+.++++ ..-+.+=..+.....+|||||++|.++.+........++...+...+.++.
T Consensus 57 ~E~~~l~~l~H-----------------pnIv~l~~~~~~~~~~iv~E~~~~g~l~~~~~~~~~~l~~~~~~~~~~qi~~ 119 (273)
T d1mp8a_ 57 QEALTMRQFDH-----------------PHIVKLIGVITENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLST 119 (273)
T ss_dssp HHHHHHHTCCC-----------------TTBCCEEEEECSSSCEEEEECCTTEEHHHHHHHTTTTSCHHHHHHHHHHHHH
T ss_pred HHHHHHHhCCC-----------------CCEeeEEEEEecCeEEEEEEeccCCcHHhhhhccCCCCCHHHHHHHHHHHHH
Confidence 66666655432 111222222224567899999999998876443444566666666555554
Q ss_pred -HHHHHhcCccccCCCCCCeEEccCCCCceEEEecccccccCHH
Q 002031 279 -AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSSS 321 (977)
Q Consensus 279 -l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~~ 321 (977)
+..+|..|++|||+||.||+++.+ +.++|+|||+++.++..
T Consensus 120 gl~ylH~~~iiHrDlKp~NIll~~~--~~~Kl~DfG~a~~~~~~ 161 (273)
T d1mp8a_ 120 ALAYLESKRFVHRDIAARNVLVSSN--DCVKLGDFGLSRYMEDS 161 (273)
T ss_dssp HHHHHHHTTCCCSCCSGGGEEEEET--TEEEECC----------
T ss_pred HhhhhcccCeeccccchhheeecCC--CcEEEccchhheeccCC
Confidence 888999999999999999999976 89999999999877543
|
| >d1ywna1 d.144.1.7 (A:818-1166) Vascular endothelial growth factor receptor 2 (kdr) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Vascular endothelial growth factor receptor 2 (kdr) species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.53 E-value=7.1e-15 Score=159.55 Aligned_cols=141 Identities=18% Similarity=0.171 Sum_probs=86.3
Q ss_pred cccccccccEEEEEEec------CCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccC
Q 002031 124 TPLATASIAQVHRATLV------DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELD 197 (977)
Q Consensus 124 ~piasaSigqV~~A~l~------~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld 197 (977)
+.||+|+||+||+|+.+ +++.||||+.+.+....- .+ .
T Consensus 19 ~~iG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~~---~~---------------------------------~ 62 (299)
T d1ywna1 19 KPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSE---HR---------------------------------A 62 (299)
T ss_dssp EEEEECSSCEEEEEEEESTTSSSCEEEEEEEEC----CHHH---HH---------------------------------H
T ss_pred eEEeecCCeEEEEEEEcCCCcccCCeEEEEEEEccccCcHH---HH---------------------------------H
Confidence 67999999999999863 457899998764322110 00 1
Q ss_pred cHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCC-eEeceeee--cCCceEEeeccCCCCCCChHHHHh------------
Q 002031 198 FNSEAENTRIVSANLGCKNKHEDSNKKPAYEVD-VLIPEVIQ--SSETVLILEFMDGIRLNDCESLEA------------ 262 (977)
Q Consensus 198 ~~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~-v~vP~v~~--~~~~vLVmE~i~G~~L~~~~~~~~------------ 262 (977)
+.+|...+.++.+ ++. +.+-.... ....++||||++|++|.++.....
T Consensus 63 ~~~e~~~l~~~~~-----------------h~~iv~~~~~~~~~~~~~~iv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~ 125 (299)
T d1ywna1 63 LMSELKILIHIGH-----------------HLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPED 125 (299)
T ss_dssp HHHHHHHHHHHCC-----------------CTTBCCEEEEECSTTSCCEEEEECCTTCBHHHHHHHTGGGBCC-------
T ss_pred HHHHHHHHHhhcC-----------------CCeEEEeeeeeccCCCeEEEEEEecCCCcHHHHHHhccccccccccchhh
Confidence 2334444444321 111 11111111 234589999999999988754221
Q ss_pred ---cCCCHHHHHHHHHHHH--HHHHHhcCccccCCCCCCeEEccCCCCceEEEecccccccC
Q 002031 263 ---FGVNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 319 (977)
Q Consensus 263 ---~~~~~~~l~~~l~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~ 319 (977)
..++...+...+.++. +..+|..|++||||||.|||++.+ +.++|+|||+++.+.
T Consensus 126 ~~~~~l~~~~~~~~~~qi~~gl~ylH~~~ivHrDlKp~NILl~~~--~~~Kl~DFGla~~~~ 185 (299)
T d1ywna1 126 LYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEK--NVVKICDFGLARDIY 185 (299)
T ss_dssp ----CBCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECGG--GCEEECC------CC
T ss_pred hhcccCCHHHHHHHHHHHHHHHHHHHhCCCcCCcCCccceeECCC--CcEEEccCcchhhcc
Confidence 1244555555555544 788999999999999999999866 899999999987654
|
| >d1gz8a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cyclin-dependent PK, CDK2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.52 E-value=2.4e-15 Score=163.32 Aligned_cols=141 Identities=16% Similarity=0.155 Sum_probs=93.4
Q ss_pred cccccccccEEEEEEe-cCCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCcHHHH
Q 002031 124 TPLATASIAQVHRATL-VDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (977)
Q Consensus 124 ~piasaSigqV~~A~l-~~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea 202 (977)
+-||+|++|.||+|+. .+|+.||||+.+......- ..-.+.+|.
T Consensus 8 ~~lG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~-----------------------------------~~~~~~~Ei 52 (298)
T d1gz8a_ 8 EKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEG-----------------------------------VPSTAIREI 52 (298)
T ss_dssp EEEEECSSSEEEEEEETTTCCEEEEEEEC------------------------------------------CCHHHHHHH
T ss_pred cEEecCcCeEEEEEEECCCCCEEEEEEEehhhcChH-----------------------------------HHHHHHHHH
Confidence 5699999999999997 5899999998754321000 001244555
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeee-cCCceEEeeccCCCCCCChHHHHhcCCCHHHHHHHHHHHH--H
Q 002031 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--A 279 (977)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~--l 279 (977)
+.+.++.+ ..-+.+-..+. ....+|||||++|..+.........+++...+...+.+++ +
T Consensus 53 ~il~~l~H-----------------p~Iv~~~~~~~~~~~~~iv~e~~~~~~~~~~~~~~~~~l~e~~~~~~~~qil~~L 115 (298)
T d1gz8a_ 53 SLLKELNH-----------------PNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGL 115 (298)
T ss_dssp HHHTTCCC-----------------TTBCCEEEEEEETTEEEEEEECCSEEHHHHHHHTTTTCCCHHHHHHHHHHHHHHH
T ss_pred HHHHhCCC-----------------CcEEEeccccccccceeEEEeecCCchhhhhhhhcccCCCHHHHHHHHHHHHHHH
Confidence 55444321 11122222222 4567899999987544433222234567666666666655 8
Q ss_pred HHHHhcCccccCCCCCCeEEccCCCCceEEEeccccccc
Q 002031 280 HQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKL 318 (977)
Q Consensus 280 ~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l 318 (977)
..+|..|++|||+||+|||++.+ +.++|+|||+++..
T Consensus 116 ~yLH~~~IiHrDiKpeNIl~~~~--~~~kl~DFG~a~~~ 152 (298)
T d1gz8a_ 116 AFCHSHRVLHRDLKPQNLLINTE--GAIKLADFGLARAF 152 (298)
T ss_dssp HHHHHTTCCCSCCCGGGEEECTT--SCEEECSTTHHHHH
T ss_pred HHhhcCCEEccccCchheeeccc--CcceeccCCcceec
Confidence 89999999999999999999865 89999999988643
|
| >d1xwsa_ d.144.1.7 (A:) Proto-oncogene serine/threonine-protein kinase Pim-1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Proto-oncogene serine/threonine-protein kinase Pim-1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.51 E-value=1.2e-14 Score=155.75 Aligned_cols=149 Identities=18% Similarity=0.148 Sum_probs=98.8
Q ss_pred cccccccccEEEEEEe-cCCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCcHHHH
Q 002031 124 TPLATASIAQVHRATL-VDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (977)
Q Consensus 124 ~piasaSigqV~~A~l-~~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea 202 (977)
+.||+|+||.||+|+. .+|+.||||+.+....... ........+.+|.
T Consensus 10 ~~lG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~~~~-------------------------------~~~~~~~~~~~E~ 58 (273)
T d1xwsa_ 10 PLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDW-------------------------------GELPNGTRVPMEV 58 (273)
T ss_dssp EEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCCE-------------------------------EECTTCCEEEHHH
T ss_pred EEEeeCCCeEEEEEEECCCCCEEEEEEEehHHccch-------------------------------hhhhHHHHHHHHH
Confidence 5799999999999997 4899999998764321000 0001122355677
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeee-cCCceEEeeccCCC-CCCChHHHHhcCCCHHHHHHHHHHHH--
Q 002031 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGI-RLNDCESLEAFGVNKQKVVEEITRAY-- 278 (977)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLVmE~i~G~-~L~~~~~~~~~~~~~~~l~~~l~~~~-- 278 (977)
..+.++.... ..-+.+=.++. ....++||||++|. .+.+... ....++...+...+.+++
T Consensus 59 ~il~~l~~~h---------------~nIv~~~~~~~~~~~~~lv~e~~~~~~~l~~~~~-~~~~l~e~~~~~~~~qi~~a 122 (273)
T d1xwsa_ 59 VLLKKVSSGF---------------SGVIRLLDWFERPDSFVLILERPEPVQDLFDFIT-ERGALQEELARSFFWQVLEA 122 (273)
T ss_dssp HHHHHHCSSS---------------CSBCCEEEEEECSSEEEEEEECCSSEEEHHHHHH-HHCSCCHHHHHHHHHHHHHH
T ss_pred HHHHHhccCC---------------CCccEEEEEEeeCCeEEEEEEeccCcchHHHHHh-ccCCCCHHHHHHHHHHHHHH
Confidence 7776664210 01122222333 45568999999874 4433322 334566666666555555
Q ss_pred HHHHHhcCccccCCCCCCeEEccCCCCceEEEecccccccCH
Q 002031 279 AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 320 (977)
Q Consensus 279 l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 320 (977)
+..+|..|++|||+||+|||++.+ ++.++|+|||++.....
T Consensus 123 l~~lH~~~iiHrDiKp~NIll~~~-~~~vkl~DFG~a~~~~~ 163 (273)
T d1xwsa_ 123 VRHCHNCGVLHRDIKDENILIDLN-RGELKLIDFGSGALLKD 163 (273)
T ss_dssp HHHHHHTTEECSCCSGGGEEEETT-TTEEEECCCTTCEECCS
T ss_pred HHHHHHCCCccccCcccceEEecC-CCeEEECccccceeccc
Confidence 889999999999999999999854 37899999999986653
|
| >d1ckia_ d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Casein kinase-1, CK1 species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=99.51 E-value=7.4e-15 Score=159.38 Aligned_cols=138 Identities=20% Similarity=0.300 Sum_probs=94.7
Q ss_pred cccccccccEEEEEEe-cCCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCcHHHH
Q 002031 124 TPLATASIAQVHRATL-VDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (977)
Q Consensus 124 ~piasaSigqV~~A~l-~~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea 202 (977)
+.||+|+||.||+|+. .+|+.||||+.+.... +-.+..|+
T Consensus 13 ~~iG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~---------------------------------------~~~~~~E~ 53 (299)
T d1ckia_ 13 RKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTK---------------------------------------HPQLHIES 53 (299)
T ss_dssp EEEEECSSSEEEEEEETTTTEEEEEEEEESCTT---------------------------------------SCCHHHHH
T ss_pred EEEeeCCCcEEEEEEECCCCCEEEEEEEchhcc---------------------------------------CHHHHHHH
Confidence 5799999999999997 4799999998754311 01234565
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeee----cCCceEEeeccCCCCCCChHHHHhcCCCHHHHHHHHHHHH
Q 002031 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ----SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY 278 (977)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~----~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~ 278 (977)
+.+..+.+ + ..|+.++. ....++||||++|. +.+........++...+...+.+++
T Consensus 54 ~i~~~l~~-----------------~--~~i~~~~~~~~~~~~~~ivme~~~~~-l~~~~~~~~~~~~~~~~~~~~~qi~ 113 (299)
T d1ckia_ 54 KIYKMMQG-----------------G--VGIPTIRWCGAEGDYNVMVMELLGPS-LEDLFNFCSRKFSLKTVLLLADQMI 113 (299)
T ss_dssp HHHHHSTT-----------------S--TTCCCEEEEEEETTEEEEEEECCCCB-HHHHHHHTTTCCCHHHHHHHHHHHH
T ss_pred HHHHHccC-----------------C--CcccEEEEEEecCCEEEEEEEEcCCc-hhhhhhhccCCCcHHHHHHHHHHHH
Confidence 55554432 1 11222221 45568999999654 3333333334567777766666655
Q ss_pred --HHHHHhcCccccCCCCCCeEEccC-CCCceEEEecccccccCH
Q 002031 279 --AHQIYVDGFFNGDPHPGNFLVSKD-PPHRPILLDFGLTKKLSS 320 (977)
Q Consensus 279 --l~~i~~~G~~H~D~hPgNIlv~~~-~~g~i~LiDFG~~~~l~~ 320 (977)
++.+|..|++|||+||+|||++.. .+..++|+|||+++.+..
T Consensus 114 ~~l~~lH~~~iiHrDiKp~NIl~~~~~~~~~vkl~DFG~a~~~~~ 158 (299)
T d1ckia_ 114 SRIEYIHSKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRD 158 (299)
T ss_dssp HHHHHHHHTTEECSCCCGGGEEECCGGGTTCEEECCCSSCEECBC
T ss_pred HHHHHHHHCCeeeccCCHhhccccccCCCceeeeeccCcceeccc
Confidence 889999999999999999998642 235799999999987643
|
| >d2ozaa1 d.144.1.7 (A:51-385) MAP kinase activated protein kinase 2, mapkap2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: MAP kinase activated protein kinase 2, mapkap2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.50 E-value=9.5e-15 Score=161.12 Aligned_cols=139 Identities=19% Similarity=0.172 Sum_probs=94.1
Q ss_pred cccccccccEEEEEEe-cCCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCcHHHH
Q 002031 124 TPLATASIAQVHRATL-VDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (977)
Q Consensus 124 ~piasaSigqV~~A~l-~~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea 202 (977)
+.||+|++|.||+|+. .+|+.||||+.+.. .. +.+|.
T Consensus 18 ~~lG~G~fg~Vy~a~~~~~~~~vAiK~i~~~--~~----------------------------------------~~~E~ 55 (335)
T d2ozaa1 18 QVLGLGINGKVLQIFNKRTQEKFALKMLQDC--PK----------------------------------------ARREV 55 (335)
T ss_dssp EEEEECSSCEEEEEEETTTCCEEEEEEEECS--HH----------------------------------------HHHHH
T ss_pred EEeeeccCeEEEEEEECCCCCEEEEEEECCc--HH----------------------------------------HHHHH
Confidence 5799999999999997 58999999987531 01 12344
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeee-----cCCceEEeeccCCCCCCChHHHHh-cCCCHHHHHHHHHH
Q 002031 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-----SSETVLILEFMDGIRLNDCESLEA-FGVNKQKVVEEITR 276 (977)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-----~~~~vLVmE~i~G~~L~~~~~~~~-~~~~~~~l~~~l~~ 276 (977)
..+.++.+ + ..-+.+=.++. ....+||||||+|++|.++..... ..++...+...+.+
T Consensus 56 ~~~~~~~~---h-------------pnIv~l~~~~~~~~~~~~~~~ivmEy~~gg~L~~~i~~~~~~~l~e~~~~~i~~q 119 (335)
T d2ozaa1 56 ELHWRASQ---C-------------PHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKS 119 (335)
T ss_dssp HHHHHHTT---S-------------TTBCCEEEEEEEEETTEEEEEEEEECCCSEEHHHHHHSCSCCCEEHHHHHHHHHH
T ss_pred HHHHHhcC---C-------------CCCCeEEEEEeecccCCCEEEEEEECCCCCcHHHHHHhcCCCCcCHHHHHHHHHH
Confidence 43333311 0 11122323332 133589999999999987643111 23555555555555
Q ss_pred HH--HHHHHhcCccccCCCCCCeEEccC-CCCceEEEecccccccCH
Q 002031 277 AY--AHQIYVDGFFNGDPHPGNFLVSKD-PPHRPILLDFGLTKKLSS 320 (977)
Q Consensus 277 ~~--l~~i~~~G~~H~D~hPgNIlv~~~-~~g~i~LiDFG~~~~l~~ 320 (977)
++ +..+|..|++|||+||+|||++.+ +.+.++|+|||+++.+..
T Consensus 120 i~~al~ylH~~~iiHRDiKp~NIll~~~~~~~~~Kl~DFG~a~~~~~ 166 (335)
T d2ozaa1 120 IGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTS 166 (335)
T ss_dssp HHHHHHHHHHTTEECCCCSGGGEEESCSSTTCCEEECCCTTCEECCC
T ss_pred HHHHHHHHHHcCCccccccccccccccccccccccccccceeeeccC
Confidence 54 888999999999999999999853 246799999999987644
|
| >d1xjda_ d.144.1.7 (A:) Protein kinase C, theta type {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Protein kinase C, theta type species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.50 E-value=1.6e-14 Score=158.30 Aligned_cols=144 Identities=15% Similarity=0.145 Sum_probs=96.1
Q ss_pred cccccccccEEEEEEec-CCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCcHHHH
Q 002031 124 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (977)
Q Consensus 124 ~piasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea 202 (977)
+.||+|++|.||+|+.+ +|+.||||+.+++.... ..+.. .+..|.
T Consensus 8 ~~iG~G~fg~Vy~~~~~~t~~~vAvK~i~k~~~~~-~~~~~---------------------------------~~~~e~ 53 (320)
T d1xjda_ 8 KMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLM-DDDVE---------------------------------CTMVEK 53 (320)
T ss_dssp EEEEECSSSEEEEEEETTTTEEEEEEEEEHHHHHH-TTCHH---------------------------------HHHHHH
T ss_pred eEEecCCCcEEEEEEECCCCCEEEEEEEchhhccC-hHHHH---------------------------------HHHHHH
Confidence 67999999999999985 79999999986421100 00000 122232
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeee-cCCceEEeeccCCCCCCChHHHHhcCCCHHHHHHHHHHHH--H
Q 002031 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--A 279 (977)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~--l 279 (977)
..+.+ .+.+ ..-+.+=.++. ....+|||||++|++|.++.. ....++...+...+.+++ +
T Consensus 54 ~~l~~---~~~h-------------p~Iv~~~~~~~~~~~~yivmEy~~~g~L~~~i~-~~~~~~e~~~~~~~~qi~~al 116 (320)
T d1xjda_ 54 RVLSL---AWEH-------------PFLTHMFCTFQTKENLFFVMEYLNGGDLMYHIQ-SCHKFDLSRATFYAAEIILGL 116 (320)
T ss_dssp HHHHH---HTTC-------------TTBCCEEEEEECSSEEEEEEECCTTCBHHHHHH-HHSSCCHHHHHHHHHHHHHHH
T ss_pred HHHHH---hCCC-------------CcEEEEEEEEccCCceeEEEeecCCCcHHHHhh-ccCCCCHHHHHHHHHHHHHHH
Confidence 22221 1210 11122222222 455689999999999988754 334566666665555554 8
Q ss_pred HHHHhcCccccCCCCCCeEEccCCCCceEEEecccccccCH
Q 002031 280 HQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 320 (977)
Q Consensus 280 ~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 320 (977)
+.+|..|++|||+||.|||++.+ ++++|+|||+++.+..
T Consensus 117 ~ylH~~~iiHrDikp~NiL~~~~--~~~kl~DFG~a~~~~~ 155 (320)
T d1xjda_ 117 QFLHSKGIVYRDLKLDNILLDKD--GHIKIADFGMCKENML 155 (320)
T ss_dssp HHHHHTTCBCCCCCGGGEEECTT--SCEEECCCTTCBCCCC
T ss_pred HHHHhCCeeeccCcccceeecCC--Cceeccccchhhhccc
Confidence 89999999999999999999965 8999999999987643
|
| >d1pmea_ d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: MAP kinase Erk2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.50 E-value=2.2e-14 Score=158.97 Aligned_cols=141 Identities=15% Similarity=0.137 Sum_probs=96.3
Q ss_pred cccccccccEEEEEEe-cCCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCcHHHH
Q 002031 124 TPLATASIAQVHRATL-VDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (977)
Q Consensus 124 ~piasaSigqV~~A~l-~~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea 202 (977)
+.||+|++|+||+|+. .+|+.||||+.++.-.... . + .+.+|.
T Consensus 14 ~~LG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~---~-----------------------~----------~~~~Ei 57 (345)
T d1pmea_ 14 SYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTY---C-----------------------Q----------RTLREI 57 (345)
T ss_dssp EECC---CCCEEEEEETTTCSEEEEEEECCTTCHHH---H-----------------------H----------HHHHHH
T ss_pred EEEeeccCeEEEEEEECCCCcEEEEEEEehhcChHH---H-----------------------H----------HHHHHH
Confidence 6799999999999997 5899999999864321110 0 0 234566
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeee-----cCCceEEeeccCCCCCCChHHHHhcCCCHHHHHHHHHHH
Q 002031 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-----SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRA 277 (977)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-----~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~ 277 (977)
..+..+.+ ...+.+-.++. ....+++|+++.|.+|.++. ...+++...+...+.++
T Consensus 58 ~il~~l~h-----------------p~iv~~~~~~~~~~~~~~~~~~l~~~~~~g~L~~~l--~~~~l~~~~i~~i~~qi 118 (345)
T d1pmea_ 58 KILLRFRH-----------------ENIIGINDIIRAPTIEQMKDVYLVTHLMGADLYKLL--KTQHLSNDHICYFLYQI 118 (345)
T ss_dssp HHHHHCCC-----------------TTBCCCCEEECCSSTTTCCCEEEEEECCCEEHHHHH--HHCCCCHHHHHHHHHHH
T ss_pred HHHHHcCC-----------------CCCCcEEEEEeeccccccceEEEEEeecCCchhhhh--hcCCCCHHHHHHHHHHH
Confidence 66655532 11122222322 22346667777898988774 45577777777766666
Q ss_pred H--HHHHHhcCccccCCCCCCeEEccCCCCceEEEecccccccCHH
Q 002031 278 Y--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSSS 321 (977)
Q Consensus 278 ~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~~ 321 (977)
+ ++.+|..|++||||||+|||++.+ +.++|+|||++..+...
T Consensus 119 l~al~yLH~~~iiHRDIKp~NILl~~~--~~~kl~DfG~a~~~~~~ 162 (345)
T d1pmea_ 119 LRGLKYIHSANVLHRDLKPSNLLLNTT--CDLKICDFGLARVADPD 162 (345)
T ss_dssp HHHHHHHHHTTEECCCCCGGGEEECTT--CCEEECCCTTCEECCGG
T ss_pred HHHHHHHHHCCCcCCCCCcceEEECCC--CCEEEcccCceeeccCC
Confidence 5 889999999999999999999865 89999999999877553
|
| >d1ob3a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmodium falciparum) [TaxId: 5833]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cyclin-dependent PK, CDK2 species: (Plasmodium falciparum) [TaxId: 5833]
Probab=99.50 E-value=5.5e-15 Score=159.39 Aligned_cols=139 Identities=14% Similarity=0.106 Sum_probs=97.2
Q ss_pred cccccccccEEEEEEecCCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCcHHHHH
Q 002031 124 TPLATASIAQVHRATLVDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEAE 203 (977)
Q Consensus 124 ~piasaSigqV~~A~l~~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea~ 203 (977)
+.||+|++|.||+|+.++|+.||||+.+...... ..+-.+.+|..
T Consensus 8 ~~iG~G~fg~Vy~~~~~~~~~vAvK~i~~~~~~~-----------------------------------~~~~~~~~E~~ 52 (286)
T d1ob3a_ 8 EKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDE-----------------------------------GIPSTTIREIS 52 (286)
T ss_dssp EEEEEETTEEEEEEEETTSCEEEEEEECCSSGGG-----------------------------------CCCHHHHHHHH
T ss_pred cEEecCCCcEEEEEEeCCCCEEEEEEEehhhcCh-----------------------------------HHHHHHHHHHH
Confidence 5699999999999999999999999875432110 00112445655
Q ss_pred HHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeee----cCCceEEeeccCCCCCCChHHHHhcCCCHHHHHHHHHHHH-
Q 002031 204 NTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ----SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY- 278 (977)
Q Consensus 204 n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~----~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~- 278 (977)
.+.++.+ ..|.+++. .+..+++||++.|..+..+.. ....++...+...+.+++
T Consensus 53 il~~l~h--------------------pnIv~~~~~~~~~~~~~i~~e~~~~~~~~~~~~-~~~~l~~~~~~~i~~qi~~ 111 (286)
T d1ob3a_ 53 ILKELKH--------------------SNIVKLYDVIHTKKRLVLVFEHLDQDLKKLLDV-CEGGLESVTAKSFLLQLLN 111 (286)
T ss_dssp GGGGCCC--------------------TTBCCEEEEEECSSCEEEEEECCSEEHHHHHHT-STTCCCHHHHHHHHHHHHH
T ss_pred HHHhCCC--------------------CcEEeeeeecccCCceeEEEEeehhhhHHHHHh-hcCCcchhhhHHHHHHHHH
Confidence 5544421 12223332 566789999999876654422 233456666555555544
Q ss_pred -HHHHHhcCccccCCCCCCeEEccCCCCceEEEecccccccCH
Q 002031 279 -AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 320 (977)
Q Consensus 279 -l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 320 (977)
++.+|..|++|||+||.|||++.+ +.++|+|||++..+..
T Consensus 112 ~L~~LH~~~IvHrDiKp~NIll~~~--~~~kl~DfG~a~~~~~ 152 (286)
T d1ob3a_ 112 GIAYCHDRRVLHRDLKPQNLLINRE--GELKIADFGLARAFGI 152 (286)
T ss_dssp HHHHHHHTTCCCSCCCGGGEEECTT--SCEEECCTTHHHHHCC
T ss_pred HHHHhccCcEEecCCCCceeeEcCC--CCEEecccccceeccc
Confidence 889999999999999999999865 8999999999877653
|
| >d1u46a_ d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Activated CDC42 kinase 1, ACK1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.49 E-value=1e-14 Score=156.29 Aligned_cols=142 Identities=17% Similarity=0.141 Sum_probs=94.4
Q ss_pred cccccccccEEEEEEec--CC--CEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCcH
Q 002031 124 TPLATASIAQVHRATLV--DG--RQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFN 199 (977)
Q Consensus 124 ~piasaSigqV~~A~l~--~G--~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~ 199 (977)
+-||+|+||+||+|+++ ++ ..||||+..+.....- ...+ +|.
T Consensus 14 ~~iG~G~fg~Vy~~~~~~~~~~~~~vAiK~l~~~~~~~~------------------------~~~~----------~~~ 59 (273)
T d1u46a_ 14 EKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQP------------------------EAMD----------DFI 59 (273)
T ss_dssp EECC----CCCEEEEEECTTSCEEEEEEEC--------C------------------------HHHH----------HHH
T ss_pred EEEecCCCeEEEEEEEECCCCcEEEEEEEEEChhhcCCH------------------------HHHH----------HHH
Confidence 46999999999999863 33 3789998755322110 0001 356
Q ss_pred HHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeee---cCCceEEeeccCCCCCCChHHHHhcCCCHHHHHHHHHH
Q 002031 200 SEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ---SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITR 276 (977)
Q Consensus 200 ~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~---~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~ 276 (977)
+|++.+.++++ -.|.+++. ....++||||+++.++.+........++...+...+.+
T Consensus 60 ~Ei~~l~~l~H--------------------~nIv~~~g~~~~~~~~lv~e~~~~~~l~~~~~~~~~~l~~~~~~~~~~q 119 (273)
T d1u46a_ 60 REVNAMHSLDH--------------------RNLIRLYGVVLTPPMKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQ 119 (273)
T ss_dssp HHHHHHHHCCC--------------------TTBCCEEEEECSSSCEEEEECCTTCBHHHHHHHHGGGSCHHHHHHHHHH
T ss_pred HHHHHHHhCCC--------------------CCEEEEEEEEeecchheeeeeecCcchhhhhhcccCCCCHHHHHHHHHH
Confidence 67766666532 11223332 45568999999999988765555555777777777766
Q ss_pred HH--HHHHHhcCccccCCCCCCeEEccCCCCceEEEecccccccCHH
Q 002031 277 AY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSSS 321 (977)
Q Consensus 277 ~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~~ 321 (977)
+. +..+|..|++|||+||.||+++.+ ++++|+|||++..+...
T Consensus 120 i~~gl~ylH~~~iiHrDikp~NIll~~~--~~vkl~DfGl~~~~~~~ 164 (273)
T d1u46a_ 120 VAEGMGYLESKRFIHRDLAARNLLLATR--DLVKIGDFGLMRALPQN 164 (273)
T ss_dssp HHHHHHHHHHTTEECSCCCGGGEEEEET--TEEEECCCTTCEECCC-
T ss_pred HHHHHHHhhhCCEeeeeecHHHhccccc--cceeeccchhhhhcccC
Confidence 65 889999999999999999999976 89999999999987543
|
| >d1q5ka_ d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gsk3b) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Glycogen synthase kinase-3 beta (Gsk3b) species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.48 E-value=1.8e-14 Score=159.89 Aligned_cols=138 Identities=21% Similarity=0.164 Sum_probs=92.2
Q ss_pred cccccccccEEEEEEec-CCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCcHHHH
Q 002031 124 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (977)
Q Consensus 124 ~piasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea 202 (977)
+.||+|+||.||+|+.+ +|+.||||+.+.+-. .+.+|.
T Consensus 26 k~LG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~-----------------------------------------~~~~Ei 64 (350)
T d1q5ka_ 26 KVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKR-----------------------------------------FKNREL 64 (350)
T ss_dssp EEEEEETTEEEEEEEETTTCCEEEEEEEECCSS-----------------------------------------SCCHHH
T ss_pred eEEeeCcCeEEEEEEECCCCCEEEEEEECccch-----------------------------------------HHHHHH
Confidence 57999999999999984 799999998754211 122455
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeee-c------CCceEEeeccCCCCCCChHHHH--hcCCCHHHHHHH
Q 002031 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-S------SETVLILEFMDGIRLNDCESLE--AFGVNKQKVVEE 273 (977)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~------~~~vLVmE~i~G~~L~~~~~~~--~~~~~~~~l~~~ 273 (977)
+.+.++++ ...+.+-.++. . ..-+|||||++|..+..+.... ...++...+...
T Consensus 65 ~il~~l~h-----------------~niv~~~~~~~~~~~~~~~~~~~lv~Ey~~~~~~~~l~~~~~~~~~l~~~~~~~i 127 (350)
T d1q5ka_ 65 QIMRKLDH-----------------CNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLY 127 (350)
T ss_dssp HHHHHCCC-----------------TTBCCEEEEEEEC--CCSCCEEEEEEECCSEEHHHHHHHHHHTTCCCCHHHHHHH
T ss_pred HHHHhcCC-----------------CCCCcEEEEEEecCccCCceEEEEEEeccCCccHHHHHhhhhccCCCCHHHHHHH
Confidence 55544422 11222333332 1 1137999999876444433221 224555555555
Q ss_pred HHHHH--HHHHHhcCccccCCCCCCeEEccCCCCceEEEecccccccCH
Q 002031 274 ITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 320 (977)
Q Consensus 274 l~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 320 (977)
+.+++ ++.+|..||+||||||+|||++.+ ...++|+|||++..+..
T Consensus 128 ~~qil~aL~yLH~~~IiHrDiKp~NILl~~~-~~~~kl~DFG~a~~~~~ 175 (350)
T d1q5ka_ 128 MYQLFRSLAYIHSFGICHRDIKPQNLLLDPD-TAVLKLCDFGSAKQLVR 175 (350)
T ss_dssp HHHHHHHHHHHHTTTEECCCCCGGGEEECTT-TCCEEECCCTTCEECCT
T ss_pred HHHHHHHHHHHHhcCCcccCCCcceEEEecC-CCceeEecccchhhccC
Confidence 55544 889999999999999999999865 24789999999987754
|
| >d1xkka_ d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: EGF receptor tyrosine kinase, Erbb-1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.47 E-value=3e-14 Score=155.99 Aligned_cols=143 Identities=17% Similarity=0.148 Sum_probs=97.2
Q ss_pred cccccccccEEEEEEec-CCC----EEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCc
Q 002031 124 TPLATASIAQVHRATLV-DGR----QVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDF 198 (977)
Q Consensus 124 ~piasaSigqV~~A~l~-~G~----~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~ 198 (977)
+.||+|+||+||+|+.+ +|+ +||||..++...... +-.|
T Consensus 15 ~~lG~G~fG~Vy~~~~~~~~~~~~~~vavK~~~~~~~~~~------------------------------------~~~~ 58 (317)
T d1xkka_ 15 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKA------------------------------------NKEI 58 (317)
T ss_dssp EEEEECSSEEEEEEEECC----CCEEEEEEEECC----CT------------------------------------HHHH
T ss_pred eEEecCCCeEEEEEEEcCCCCEEEEEEEEEEeccccCHHH------------------------------------HHHH
Confidence 68999999999999974 565 578887654322110 0125
Q ss_pred HHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeeecCCceEEeeccCCCCCCChHHHHhcCCCHHHHHHHHHHHH
Q 002031 199 NSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQSSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY 278 (977)
Q Consensus 199 ~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~ 278 (977)
.+|++.+.++++ ..-+.+=.+......+++||++.|.+|.+........++...+...+.++.
T Consensus 59 ~~E~~~l~~l~H-----------------pnIv~l~g~~~~~~~~~v~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~qi~ 121 (317)
T d1xkka_ 59 LDEAYVMASVDN-----------------PHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIA 121 (317)
T ss_dssp HHHHHHHHHCCC-----------------TTBCCEEEEEESSSEEEEEECCTTCBHHHHHHHTSSSCCHHHHHHHHHHHH
T ss_pred HHHHHHHHhCCC-----------------CCEeeEEEEEecCCeeEEEEeccCCcccccccccccCCCHHHHHHHHHHHH
Confidence 567777666532 111222222235667899999999888776444444566666666555654
Q ss_pred --HHHHHhcCccccCCCCCCeEEccCCCCceEEEecccccccCHH
Q 002031 279 --AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSSS 321 (977)
Q Consensus 279 --l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~~ 321 (977)
+..+|..|++|||+||.|||++.+ +.++|+|||+++.+...
T Consensus 122 ~gl~yLH~~~iiHrDlKp~NIll~~~--~~~kl~DFGla~~~~~~ 164 (317)
T d1xkka_ 122 KGMNYLEDRRLVHRDLAARNVLVKTP--QHVKITDFGLAKLLGAE 164 (317)
T ss_dssp HHHHHHHHTTCCCSCCCGGGEEEEET--TEEEECCCSHHHHTTTT
T ss_pred HHHHHHHHcCcccCcchhhcceeCCC--CCeEeeccccceecccc
Confidence 888999999999999999999966 89999999999877543
|
| >d1cm8a_ d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: MAP kinase p38-gamma species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.46 E-value=3.8e-14 Score=156.98 Aligned_cols=140 Identities=21% Similarity=0.318 Sum_probs=89.6
Q ss_pred cccccccccEEEEEEe-cCCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCcHHHH
Q 002031 124 TPLATASIAQVHRATL-VDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (977)
Q Consensus 124 ~piasaSigqV~~A~l-~~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea 202 (977)
+.||.|++|.||+|+. .+|+.||||+.+........ .+ .+.+|.
T Consensus 24 ~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~-----------------------------~~------~~~~Ei 68 (346)
T d1cm8a_ 24 QPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELF-----------------------------AK------RAYREL 68 (346)
T ss_dssp EEC------CEEEEEETTTCCEEEEEECSSTTSSHHH-----------------------------HH------HHHHHH
T ss_pred EEEecCCCeEEEEEEECCCCCEEEEEEEchhhcChHH-----------------------------HH------HHHHHH
Confidence 5799999999999997 47999999998643221100 00 123455
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeee-------cCCceEEeeccCCCCCCChHHHHhcCCCHHHHHHHHH
Q 002031 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-------SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEIT 275 (977)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-------~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~ 275 (977)
+.+..+.+ ...+.+-.++. ...-+|||||+ |..+..+ .....++...+...+.
T Consensus 69 ~il~~l~h-----------------pniv~l~~~~~~~~~~~~~~~~~lv~e~~-~~~l~~~--~~~~~l~~~~~~~~~~ 128 (346)
T d1cm8a_ 69 RLLKHMRH-----------------ENVIGLLDVFTPDETLDDFTDFYLVMPFM-GTDLGKL--MKHEKLGEDRIQFLVY 128 (346)
T ss_dssp HHHHHCCB-----------------TTBCCCSEEECSCSSTTTCCCCEEEEECC-SEEHHHH--HHHCCCCHHHHHHHHH
T ss_pred HHHHhcCC-----------------CCeeEEEEEeccCccccccceEEEEEecc-cccHHHH--HHhccccHHHHHHHHH
Confidence 55554432 01122222222 12358999999 5555544 3345677776666666
Q ss_pred HHH--HHHHHhcCccccCCCCCCeEEccCCCCceEEEecccccccCH
Q 002031 276 RAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 320 (977)
Q Consensus 276 ~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 320 (977)
+++ +..+|..|++|||+||+|||++.+ +.++++|||++...+.
T Consensus 129 qi~~aL~~LH~~~IiHrDiKp~NIL~~~~--~~~kl~Dfg~a~~~~~ 173 (346)
T d1cm8a_ 129 QMLKGLRYIHAAGIIHRDLKPGNLAVNED--CELKILDFGLARQADS 173 (346)
T ss_dssp HHHHHHHHHHHTTEECCCCCGGGEEECTT--CCEEECCCTTCEECCS
T ss_pred HHHHHHHHHHhCCCcccccCcchhhcccc--cccccccccceeccCC
Confidence 655 888999999999999999999865 8999999999988764
|
| >d1r0pa_ d.144.1.7 (A:) Hepatocyte growth factor receptor, c-MET {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Hepatocyte growth factor receptor, c-MET species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.46 E-value=4e-14 Score=154.46 Aligned_cols=151 Identities=15% Similarity=0.181 Sum_probs=97.7
Q ss_pred hhcccccCccccccccccEEEEEEecC--C--CEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhh
Q 002031 115 GGMFMDFVETPLATASIAQVHRATLVD--G--RQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCK 190 (977)
Q Consensus 115 ~~~f~~~d~~piasaSigqV~~A~l~~--G--~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~ 190 (977)
..+...|+ +.||.|+||.||+|++.+ + ..||||+.+...... +.
T Consensus 25 ~~~~~~~~-~~iG~G~fg~Vyk~~~~~~~~~~~~vAvK~~~~~~~~~---~~---------------------------- 72 (311)
T d1r0pa_ 25 SSLIVHFN-EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIG---EV---------------------------- 72 (311)
T ss_dssp GGEEEEEE-EEEEEETTEEEEEEEECC----CEEEEEEEECCCCCHH---HH----------------------------
T ss_pred HHceeccc-eEEeecCCeEEEEEEEECCCCEEEEEEEEEECcccCHH---HH----------------------------
Confidence 34433454 569999999999999853 2 258999875321110 00
Q ss_pred hcccccCcHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeee--cCCceEEeeccCCCCCCChHHHHhcCCCHH
Q 002031 191 EAPKELDFNSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ--SSETVLILEFMDGIRLNDCESLEAFGVNKQ 268 (977)
Q Consensus 191 ~l~~Eld~~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~--~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~ 268 (977)
-+|.+|++.+.++++- .-+.+=.... ....++||||++|.+|.++........+..
T Consensus 73 -----~~~~~E~~~l~~l~Hp-----------------nIv~~~g~~~~~~~~~~lv~E~~~~g~l~~~~~~~~~~~~~~ 130 (311)
T d1r0pa_ 73 -----SQFLTEGIIMKDFSHP-----------------NVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVK 130 (311)
T ss_dssp -----HHHHHHHHHHHTCCCT-----------------TBCCCCEEEEETTTEEEEEEECCTTCBHHHHHHCTTCCCBHH
T ss_pred -----HHHHHHHHHHHhCCCC-----------------CEeEEeEEEEecCCceEEEEEEeecCchhhhhccccccchHH
Confidence 1355677666655320 0111111111 234689999999999887644333334444
Q ss_pred HHHHHHHHHH--HHHHHhcCccccCCCCCCeEEccCCCCceEEEecccccccCHH
Q 002031 269 KVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSSS 321 (977)
Q Consensus 269 ~l~~~l~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~~ 321 (977)
.+...+.++. +..+|..|++|||+||.|||++.+ +.++|+|||+++.+...
T Consensus 131 ~~~~i~~qia~gL~~lH~~~iiHrDLK~~NILl~~~--~~~kL~DFG~~~~~~~~ 183 (311)
T d1r0pa_ 131 DLIGFGLQVAKGMKFLASKKFVHRDLAARNCMLDEK--FTVKVADFGLARDMYDK 183 (311)
T ss_dssp HHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECTT--CCEEECSSGGGCCTTTT
T ss_pred HHHHHHHHHHHhhhhhcccCcccCCccHHhEeECCC--CCEEEecccchhhcccc
Confidence 4444444433 778999999999999999999855 89999999999877543
|
| >d1lufa_ d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Musk tyrosine kinase species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=99.46 E-value=3.2e-14 Score=154.54 Aligned_cols=143 Identities=18% Similarity=0.164 Sum_probs=96.2
Q ss_pred cccccccccEEEEEEec------CCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccC
Q 002031 124 TPLATASIAQVHRATLV------DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELD 197 (977)
Q Consensus 124 ~piasaSigqV~~A~l~------~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld 197 (977)
+.||+|+||.||+|+.+ +++.||||+.+....... +-+
T Consensus 19 ~~lG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~i~~~~~~~~------------------------------------~~~ 62 (301)
T d1lufa_ 19 RDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADM------------------------------------QAD 62 (301)
T ss_dssp EEEEECSSCEEEEEEEETSSTTSSEEEEEEEECCTTCCHHH------------------------------------HHH
T ss_pred EEEeeCCCeEEEEEEECCCccCCCCeEEEEEEEChhcChHH------------------------------------HHH
Confidence 57999999999999864 468899998765432211 013
Q ss_pred cHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeee-cCCceEEeeccCCCCCCChHHHHh--------------
Q 002031 198 FNSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLEA-------------- 262 (977)
Q Consensus 198 ~~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLVmE~i~G~~L~~~~~~~~-------------- 262 (977)
|.+|+..+.++++ ...+.+=..+. ....+++|||+++.+|.++.....
T Consensus 63 ~~~E~~il~~l~h-----------------~niv~~~~~~~~~~~~~~v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~ 125 (301)
T d1lufa_ 63 FQREAALMAEFDN-----------------PNIVKLLGVCAVGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLST 125 (301)
T ss_dssp HHHHHHHHHTCCC-----------------TTBCCEEEEECSSSSCEEEEECCTTCBHHHHHHHTCC-------------
T ss_pred HHHHHHHHHhcCC-----------------CCcccceeeeccCCceEEEEEecCCCcHHHHHHhcCccccccccccccch
Confidence 4566666655432 01111112222 466789999999999887643210
Q ss_pred ---------cCCCHHHHHHHHHHHH--HHHHHhcCccccCCCCCCeEEccCCCCceEEEecccccccCHH
Q 002031 263 ---------FGVNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSSS 321 (977)
Q Consensus 263 ---------~~~~~~~l~~~l~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~~ 321 (977)
..++...+...+.++. +..+|..|++|||+||.|||++.+ +.++|+|||+++.+.+.
T Consensus 126 ~~~~~~~~~~~l~~~~~~~i~~qi~~gl~ylH~~~ivHrDlKp~NILld~~--~~~Kl~DFGls~~~~~~ 193 (301)
T d1lufa_ 126 RARVSSPGPPPLSCAEQLCIARQVAAGMAYLSERKFVHRDLATRNCLVGEN--MVVKIADFGLSRNIYSA 193 (301)
T ss_dssp ---------CCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECGG--GCEEECCCSCHHHHTGG
T ss_pred hhhccccCCCCCCHHHHHHHHHHHHHHhhhcccCCeEeeEEcccceEECCC--CcEEEccchhheeccCC
Confidence 1234444444444433 778999999999999999999965 89999999998766543
|
| >d1p4oa_ d.144.1.7 (A:) Insulin-like growth factor 1 receptor {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Insulin-like growth factor 1 receptor species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.46 E-value=2.6e-14 Score=155.80 Aligned_cols=142 Identities=18% Similarity=0.216 Sum_probs=96.0
Q ss_pred cccccccccEEEEEEec------CCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccC
Q 002031 124 TPLATASIAQVHRATLV------DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELD 197 (977)
Q Consensus 124 ~piasaSigqV~~A~l~------~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld 197 (977)
+.||+|+||.||+|+++ +++.||||+.+...... + +..
T Consensus 26 ~~lG~G~fG~Vy~a~~~~~~~~~~~~~VAvK~~~~~~~~~---~---------------------------------~~~ 69 (308)
T d1p4oa_ 26 RELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMR---E---------------------------------RIE 69 (308)
T ss_dssp EEEEECSSSEEEEEEEEEEETTEEEEEEEEEECCTTSCHH---H---------------------------------HHH
T ss_pred eEEeeCCCeEEEEEEECCcccCCCCcEEEEEEECcccChH---H---------------------------------HHH
Confidence 67999999999999873 36889999876432211 0 113
Q ss_pred cHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeee-cCCceEEeeccCCCCCCChHHHHh---------cCCCH
Q 002031 198 FNSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLEA---------FGVNK 267 (977)
Q Consensus 198 ~~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLVmE~i~G~~L~~~~~~~~---------~~~~~ 267 (977)
|.+|+..+.++.+ ...+.+-.++. ....++||||++|++|.++..... ...+.
T Consensus 70 ~~~E~~il~~l~h-----------------~nIv~~~~~~~~~~~~~lv~e~~~~g~l~~~~~~~~~~~~~~~~~~~~~~ 132 (308)
T d1p4oa_ 70 FLNEASVMKEFNC-----------------HHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSL 132 (308)
T ss_dssp HHHHHHHGGGCCC-----------------TTBCCEEEEECSSSSCEEEEECCTTCBHHHHHHHHHHHHHHCTTCCCCCH
T ss_pred HHHHHHHHHHcCC-----------------CCEeeeeeEEecCCceeEEEeecCCCCHHHHHHhcccccccccccCCCCH
Confidence 4556665554422 11122222222 466799999999999988644221 11234
Q ss_pred HHHHHHHHHHH--HHHHHhcCccccCCCCCCeEEccCCCCceEEEecccccccCH
Q 002031 268 QKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 320 (977)
Q Consensus 268 ~~l~~~l~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 320 (977)
..+...+.++. +..+|..+++|||+||.|||++.+ ++++|+|||+++.+..
T Consensus 133 ~~~~~i~~~ia~gl~~LH~~~ivHrDlk~~NiLld~~--~~~Kl~DFGla~~~~~ 185 (308)
T d1p4oa_ 133 SKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAED--FTVKIGDFGMTRDIYE 185 (308)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTCBCSCCSGGGEEECTT--CCEEECCTTCCCGGGG
T ss_pred HHHHHHHHHHHHHHHHHhhCCeeeceEcCCceeecCC--ceEEEeecccceeccC
Confidence 44444444433 888999999999999999999865 8999999999987644
|
| >d2gfsa1 d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: MAP kinase p38 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.45 E-value=3.8e-14 Score=157.07 Aligned_cols=142 Identities=20% Similarity=0.243 Sum_probs=96.1
Q ss_pred cccccccccEEEEEEe-cCCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCcHHHH
Q 002031 124 TPLATASIAQVHRATL-VDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (977)
Q Consensus 124 ~piasaSigqV~~A~l-~~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea 202 (977)
+.||+|++|.||+|+. .+|+.||||+.+........ . -.+.+|+
T Consensus 24 ~~LG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~--~---------------------------------~~~~~Ei 68 (348)
T d2gfsa1 24 SPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIH--A---------------------------------KRTYREL 68 (348)
T ss_dssp EECGGGTTSSEEEEEETTTTEEEEEEECSCTTSSHHH--H---------------------------------HHHHHHH
T ss_pred EEEecCCCeEEEEEEECCCCCEEEEEEECchhcChHH--H---------------------------------HHHHHHH
Confidence 6799999999999997 58999999997643221110 0 0134466
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeee------cCCceEEeeccCCCCCCChHHHHhcCCCHHHHHHHHHH
Q 002031 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ------SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITR 276 (977)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~------~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~ 276 (977)
+.+.++.+ ...+.+-.++. ....+++||++.|.+|.++. ...+++...+...+.+
T Consensus 69 ~il~~l~h-----------------~~iv~~~~~~~~~~~~~~~~~~~i~~~~~gg~L~~~~--~~~~l~e~~~~~i~~q 129 (348)
T d2gfsa1 69 RLLKHMKH-----------------ENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV--KCQKLTDDHVQFLIYQ 129 (348)
T ss_dssp HHHHHCCC-----------------TTBCCCSEEECSCSSTTTCCCCEEEEECCSEEHHHHH--TTCCCCHHHHHHHHHH
T ss_pred HHHHhcCC-----------------CCeeeEEEEEeeccccccCceEEEEEeecCCchhhhc--ccccccHHHHHHHHHH
Confidence 65555432 11222333332 23457788888999988763 3456777666666666
Q ss_pred HH--HHHHHhcCccccCCCCCCeEEccCCCCceEEEecccccccCHH
Q 002031 277 AY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSSS 321 (977)
Q Consensus 277 ~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~~ 321 (977)
++ +..+|..|++|||+||+|||++.+ +.++++|||++......
T Consensus 130 il~aL~~LH~~giiHrDiKp~NILi~~~--~~~kl~dfg~a~~~~~~ 174 (348)
T d2gfsa1 130 ILRGLKYIHSADIIHRDLKPSNLAVNED--CELKILDFGLARHTDDE 174 (348)
T ss_dssp HHHHHHHHHHTTCCCCCCCGGGEEECTT--CCEEECCC----CCTGG
T ss_pred HHHHHHHHHhCCCcccccCCcccccccc--ccccccccchhcccCcc
Confidence 55 889999999999999999999865 89999999998877544
|
| >d1vjya_ d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Type I TGF-beta receptor R4 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.44 E-value=2.8e-14 Score=155.09 Aligned_cols=75 Identities=17% Similarity=0.217 Sum_probs=58.6
Q ss_pred ceEEeeccCCCCCCChHHHHhcCCCHHHHHHHHHHHH--HHHHHh--------cCccccCCCCCCeEEccCCCCceEEEe
Q 002031 242 TVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--AHQIYV--------DGFFNGDPHPGNFLVSKDPPHRPILLD 311 (977)
Q Consensus 242 ~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~--l~~i~~--------~G~~H~D~hPgNIlv~~~~~g~i~LiD 311 (977)
.+|||||+++.+|.++. .....+.........++. +..+|. .||+|||+||.||||+.+ +.++|+|
T Consensus 76 ~~lv~Ey~~~g~L~~~l--~~~~l~~~~~~~~~~~ia~gl~~lH~~~~~~~~~~~IvHrDlKp~NILl~~~--~~~Kl~D 151 (303)
T d1vjya_ 76 LWLVSDYHEHGSLFDYL--NRYTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKN--GTCCIAD 151 (303)
T ss_dssp EEEEEECCTTCBHHHHH--HHCCBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCEEECSCCCGGGEEECTT--SCEEECC
T ss_pred EEEEEecccCCCHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHHhhhhhccCCCeeccccCccceEEcCC--CCeEEEe
Confidence 47999999999998874 455666665555555543 556664 699999999999999865 8999999
Q ss_pred cccccccCH
Q 002031 312 FGLTKKLSS 320 (977)
Q Consensus 312 FG~~~~l~~ 320 (977)
||++..+..
T Consensus 152 FGl~~~~~~ 160 (303)
T d1vjya_ 152 LGLAVRHDS 160 (303)
T ss_dssp CTTCEEEET
T ss_pred cCccccccC
Confidence 999887643
|
| >d1t46a_ d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: c-KIT receptor species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.44 E-value=5.2e-14 Score=153.59 Aligned_cols=140 Identities=15% Similarity=0.176 Sum_probs=97.5
Q ss_pred cccccccccEEEEEEec------CCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccC
Q 002031 124 TPLATASIAQVHRATLV------DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELD 197 (977)
Q Consensus 124 ~piasaSigqV~~A~l~------~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld 197 (977)
+.||+|+||.||+|+++ +++.||||+.+++....- +..
T Consensus 29 ~~iG~G~fg~Vy~a~~~~~~~~~~~~~vAvK~i~~~~~~~~------------------------------------~~~ 72 (311)
T d1t46a_ 29 KTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTE------------------------------------REA 72 (311)
T ss_dssp EEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHH------------------------------------HHH
T ss_pred eEEeecCCeEEEEEEEeccccCCCCeEEEEEEECcccCHHH------------------------------------HHH
Confidence 67999999999999862 567899999876432110 113
Q ss_pred cHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeee----cCCceEEeeccCCCCCCChHHHHh-----------
Q 002031 198 FNSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ----SSETVLILEFMDGIRLNDCESLEA----------- 262 (977)
Q Consensus 198 ~~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~----~~~~vLVmE~i~G~~L~~~~~~~~----------- 262 (977)
|.+|+..+.++.+ ++. |-+++. ....+|||||++|.+|.++.....
T Consensus 73 ~~~E~~~~~~l~~-----------------Hpn--Iv~~~g~~~~~~~~~lvmE~~~~g~l~~~l~~~~~~~~~~~~~~~ 133 (311)
T d1t46a_ 73 LMSELKVLSYLGN-----------------HMN--IVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPA 133 (311)
T ss_dssp HHHHHHHHHHHCC-----------------CTT--BCCEEEEECSSSSCEEEEECCTTEEHHHHHHHTTTTC--------
T ss_pred HHHHHHHHHhccC-----------------CCC--EEEEEEEEeeCCEEEEEEEcCCCCCHHHHHHhccccccccccccc
Confidence 4566666665521 111 223332 345699999999999877643211
Q ss_pred ------cCCCHHHHHHHHHHHH--HHHHHhcCccccCCCCCCeEEccCCCCceEEEecccccccCH
Q 002031 263 ------FGVNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 320 (977)
Q Consensus 263 ------~~~~~~~l~~~l~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 320 (977)
..++...+...+.++. +..+|..|++|||+||.||+++.+ +.++++|||+++.+..
T Consensus 134 ~~~~~~~~l~~~~~~~~~~qi~~gl~~LH~~~ivHrDLKp~NIl~~~~--~~~ki~DfG~~~~~~~ 197 (311)
T d1t46a_ 134 IMEDDELALDLEDLLSFSYQVAKGMAFLASKNCIHRDLAARNILLTHG--RITKICDFGLARDIKN 197 (311)
T ss_dssp ------CCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEETT--TEEEECCCGGGSCTTS
T ss_pred cccccccCCCHHHHHHHHHHHHHHHHHHHhCCeeeccccccccccccc--CcccccccchheeccC
Confidence 1244455555555544 888999999999999999999865 8999999999987654
|
| >d1vzoa_ d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5, Msk1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Ribosomal protein S6 kinase alpha 5, Msk1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.44 E-value=4e-14 Score=155.21 Aligned_cols=146 Identities=18% Similarity=0.195 Sum_probs=98.1
Q ss_pred cccccccccEEEEEEec----CCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCcH
Q 002031 124 TPLATASIAQVHRATLV----DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFN 199 (977)
Q Consensus 124 ~piasaSigqV~~A~l~----~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~ 199 (977)
+.||+|++|.||+|+.. +|+.||||+.++.....-. ...-.+.
T Consensus 30 ~~IG~G~fg~Vy~~~~~~~~~~g~~vAvK~i~~~~~~~~~---------------------------------~~~~~~~ 76 (322)
T d1vzoa_ 30 KVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKA---------------------------------KTTEHTR 76 (322)
T ss_dssp EEEEETTTEEEEEEEECSSTTTTCEEEEEEESEEEEEEEE---------------------------------SSGGGCC
T ss_pred EEEecCCCeEEEEEEECccCCCCcEEEEEEEehHHhccch---------------------------------HHHHHHH
Confidence 68999999999999862 5899999987542110000 0001245
Q ss_pred HHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeee-cCCceEEeeccCCCCCCChHHHHhcCCCHHHHHHHHHHHH
Q 002031 200 SEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY 278 (977)
Q Consensus 200 ~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~ 278 (977)
+|++.+.++++.- .-+.+=..+. ....++||||++|.+|.+.... ........+...+.+++
T Consensus 77 ~E~~il~~l~h~p----------------nIv~~~~~~~~~~~~~~v~e~~~~~~L~~~i~~-~~~~~e~~~~~~~~Qi~ 139 (322)
T d1vzoa_ 77 TERQVLEHIRQSP----------------FLVTLHYAFQTETKLHLILDYINGGELFTHLSQ-RERFTEHEVQIYVGEIV 139 (322)
T ss_dssp CHHHHHHHHHTCT----------------TBCCEEEEEEETTEEEEEECCCCSCBHHHHHHH-HSCCCHHHHHHHHHHHH
T ss_pred HHHHHHHhccCCC----------------eEEEeeeeeccCCceeeeeecccccHHHHHHHh-cccccHHHHHHHHHHHH
Confidence 6777777776510 0111112222 4556899999999999776432 22334444444443433
Q ss_pred --HHHHHhcCccccCCCCCCeEEccCCCCceEEEecccccccCHH
Q 002031 279 --AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSSS 321 (977)
Q Consensus 279 --l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~~ 321 (977)
++.+|..|++|||+||.|||++.+ +.++|+|||+++.+...
T Consensus 140 ~al~~lH~~~ivHrDiKp~Nill~~~--~~vkL~DFG~a~~~~~~ 182 (322)
T d1vzoa_ 140 LALEHLHKLGIIYRDIKLENILLDSN--GHVVLTDFGLSKEFVAD 182 (322)
T ss_dssp HHHHHHHHTTCCCCCCCGGGEEECTT--SCEEESCSSEEEECCGG
T ss_pred HHHHHhhcCCEEeccCCccceeecCC--CCEEEeeccchhhhccc
Confidence 788999999999999999999965 89999999999887653
|
| >d1fgka_ d.144.1.7 (A:) Fibroblast growth factor receptor 1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Fibroblast growth factor receptor 1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.43 E-value=1e-13 Score=150.41 Aligned_cols=143 Identities=18% Similarity=0.207 Sum_probs=92.9
Q ss_pred cccccccccEEEEEEec--------CCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccc
Q 002031 124 TPLATASIAQVHRATLV--------DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKE 195 (977)
Q Consensus 124 ~piasaSigqV~~A~l~--------~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~E 195 (977)
+.||+|+||+||+|+.. ++..||||+.+++....-.
T Consensus 19 ~~iG~G~fg~Vy~~~~~~~~~~~~~~~~~vAvK~~~~~~~~~~~------------------------------------ 62 (299)
T d1fgka_ 19 KPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDL------------------------------------ 62 (299)
T ss_dssp EECC-----CEEEEEEECC----CCCEEEEEEECCCTTCCHHHH------------------------------------
T ss_pred eEEeecCCcEEEEEEEcCCCcccccCceEEEEEEECcccChHHH------------------------------------
Confidence 67999999999999863 2347999998765432211
Q ss_pred cCcHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeee-cCCceEEeeccCCCCCCChHHHHh------------
Q 002031 196 LDFNSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLEA------------ 262 (977)
Q Consensus 196 ld~~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLVmE~i~G~~L~~~~~~~~------------ 262 (977)
.++.+|...+.++.+ + ..-+.+-.++. ....++||||++|++|.++.....
T Consensus 63 ~~~~~e~~~l~~~~~---H-------------pnIv~~~~~~~~~~~~~~v~e~~~~g~l~~~i~~~~~~~~~~~~~~~~ 126 (299)
T d1fgka_ 63 SDLISEMEMMKMIGK---H-------------KNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSH 126 (299)
T ss_dssp HHHHHHHHHHHHHCC---C-------------TTBCCEEEEECSSSSCEEEECCCTTCBHHHHHHTTSCC----------
T ss_pred HHHHHHHHHHHHhcC---C-------------CeEEecccccccCCeEEEEEEccCCCcHHHHHHhhcCCcccccccccc
Confidence 124456556555521 0 11122222332 455789999999999988753221
Q ss_pred ---cCCCHHHHHHHHHHHH--HHHHHhcCccccCCCCCCeEEccCCCCceEEEecccccccCH
Q 002031 263 ---FGVNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 320 (977)
Q Consensus 263 ---~~~~~~~l~~~l~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 320 (977)
..++...+...+.++. ++.+|..|++|||+||.|||++.+ +.++|.|||+++.++.
T Consensus 127 ~~~~~l~~~~~~~~~~qi~~al~ylH~~~ivHrDiKp~NiLl~~~--~~~kl~dfg~~~~~~~ 187 (299)
T d1fgka_ 127 NPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTED--NVMKIADFGLARDIHH 187 (299)
T ss_dssp --CCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECTT--CCEEECSTTCCCCGGG
T ss_pred CccccCCHHHHHHHHHHHHHHHHHhhhCCEEeeeecccceeecCC--CCeEeccchhhccccc
Confidence 1245555555555544 778999999999999999999966 8999999999987754
|
| >d1unla_ d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cyclin-dependent PK, CDK5 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.42 E-value=6.8e-14 Score=150.84 Aligned_cols=142 Identities=15% Similarity=0.118 Sum_probs=95.3
Q ss_pred cccccccccEEEEEEe-cCCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCcHHHH
Q 002031 124 TPLATASIAQVHRATL-VDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (977)
Q Consensus 124 ~piasaSigqV~~A~l-~~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea 202 (977)
+.||+|+||.||+|+. .+|+.||||+.+......- .. ..+.+|.
T Consensus 8 ~~LG~G~fg~V~~~~~~~~~~~vAvK~i~~~~~~~~-------------------------~~----------~~~~~E~ 52 (292)
T d1unla_ 8 EKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEG-------------------------VP----------SSALREI 52 (292)
T ss_dssp EEEEECSSSEEEEEEETTTCCEEEEEEEESSCSSTT-------------------------HH----------HHHHHHH
T ss_pred eEEecCcCeEEEEEEECCCCcEEEEEEEehhhCChH-------------------------HH----------HHHHHHH
Confidence 4699999999999997 5899999999864321100 00 0133444
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeee-cCCceEEeeccCCCCCCChHHHHhcCCCHHHHHHHHHHHH--H
Q 002031 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--A 279 (977)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~--l 279 (977)
..+..+++ ..-+.+-..+. ....++|||++.|..+..+.. .........+...+.+++ +
T Consensus 53 ~il~~l~h-----------------~niv~~~~~~~~~~~~~iv~~~~~~~~l~~~~~-~~~~~~~~~~~~~~~q~~~aL 114 (292)
T d1unla_ 53 CLLKELKH-----------------KNIVRLHDVLHSDKKLTLVFEFCDQDLKKYFDS-CNGDLDPEIVKSFLFQLLKGL 114 (292)
T ss_dssp HHHTTCCC-----------------TTBCCEEEEEECSSEEEEEEECCSEEHHHHHHH-TTTCCCHHHHHHHHHHHHHHH
T ss_pred HHHHhcCc-----------------CCEEeeccccccccceeEEeeeccccccccccc-cccccchhHHHHHHHHHHHHH
Confidence 44433321 11122223333 455689999999988765532 223445555555555544 8
Q ss_pred HHHHhcCccccCCCCCCeEEccCCCCceEEEecccccccCH
Q 002031 280 HQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 320 (977)
Q Consensus 280 ~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 320 (977)
+.+|..|++|||+||+|||++.+ +.++|+|||.+..+..
T Consensus 115 ~~lH~~~IvHrDiKP~NIli~~~--~~~kl~DFG~a~~~~~ 153 (292)
T d1unla_ 115 GFCHSRNVLHRDLKPQNLLINRN--GELKLANFGLARAFGI 153 (292)
T ss_dssp HHHHHTTEECCCCSGGGEEECTT--CCEEECCCTTCEECCS
T ss_pred HHhhcCCEeeecccCcccccccC--CceeeeecchhhcccC
Confidence 89999999999999999999865 7899999999987753
|
| >d1blxa_ d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cyclin-dependent PK, CDK6 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.42 E-value=1.1e-13 Score=150.46 Aligned_cols=145 Identities=19% Similarity=0.197 Sum_probs=94.1
Q ss_pred cccccccccEEEEEEe-cC-CCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCcHHH
Q 002031 124 TPLATASIAQVHRATL-VD-GRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSE 201 (977)
Q Consensus 124 ~piasaSigqV~~A~l-~~-G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~E 201 (977)
+.||+|++|.||+|+. ++ ++.||||+.+...... .....+.+|
T Consensus 13 ~~LG~G~fg~V~~a~~~~~~~~~vAiK~i~~~~~~~-----------------------------------~~~~~~~~E 57 (305)
T d1blxa_ 13 AEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEE-----------------------------------GMPLSTIRE 57 (305)
T ss_dssp EEEEEETTEEEEEEEETTTTTEEEEEEEEEEEBCTT-----------------------------------SCBCTHHHH
T ss_pred EEEecccCeEEEEEEEECCCCEEEEEEEEehhhccc-----------------------------------hHHHHHHHH
Confidence 4699999999999997 44 6779999876432110 011133455
Q ss_pred HHHHHHHHHHhCCCCCCCCCCCCCCCCCC-eEeceeee------cCCceEEeeccCCCCCCChHHHHhcCCCHHHHHHHH
Q 002031 202 AENTRIVSANLGCKNKHEDSNKKPAYEVD-VLIPEVIQ------SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEI 274 (977)
Q Consensus 202 a~n~~~~~~~~~~~~~~~~~~~~~~~~~~-v~vP~v~~------~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l 274 (977)
...+..+... . ++. +.+=.++. ....+++|||++|..+.........+.+...+...+
T Consensus 58 ~~~l~~l~~~-~--------------HpnIv~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~ 122 (305)
T d1blxa_ 58 VAVLRHLETF-E--------------HPNVVRLFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKDMM 122 (305)
T ss_dssp HHHHHHHHHT-C--------------CTTBCCEEEEEEEEECSSEEEEEEEEECCSCBHHHHHHHSCTTCSCHHHHHHHH
T ss_pred HHHHHHHhhc-C--------------CCCcceeeeeecccccccCceEEEEEEeccCCchhhhhhccCCCCCHHHHHHHH
Confidence 5555555421 1 111 11112221 134589999999976654332233445555555555
Q ss_pred HHHH--HHHHHhcCccccCCCCCCeEEccCCCCceEEEecccccccCH
Q 002031 275 TRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 320 (977)
Q Consensus 275 ~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 320 (977)
.+++ +..+|..|++|||+||.|||++.+ +.++|+|||++.....
T Consensus 123 ~qi~~aL~yLH~~~ivHrDiKp~NILi~~~--~~~kl~dfg~~~~~~~ 168 (305)
T d1blxa_ 123 FQLLRGLDFLHSHRVVHRDLKPQNILVTSS--GQIKLADFGLARIYSF 168 (305)
T ss_dssp HHHHHHHHHHHHTTCCCCCCCGGGEEECTT--CCEEECSCCSCCCCCG
T ss_pred HHHHHHHHHHHhCCEEecCCCccEEEEcCC--CCeeecchhhhhhhcc
Confidence 5544 788999999999999999999865 8999999999886654
|
| >d1byga_ d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Carboxyl-terminal src kinase (csk) species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.42 E-value=6.4e-14 Score=148.93 Aligned_cols=135 Identities=20% Similarity=0.221 Sum_probs=90.4
Q ss_pred cccccccccEEEEEEecCCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCcHHHHH
Q 002031 124 TPLATASIAQVHRATLVDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEAE 203 (977)
Q Consensus 124 ~piasaSigqV~~A~l~~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea~ 203 (977)
+.||.|++|.||+|++ .|++||||+.+..-. .+ +|.+|++
T Consensus 13 ~~lG~G~fg~Vy~~~~-~~~~vAvK~i~~~~~-----------------------------~~----------~~~~E~~ 52 (262)
T d1byga_ 13 QTIGKGEFGDVMLGDY-RGNKVAVKCIKNDAT-----------------------------AQ----------AFLAEAS 52 (262)
T ss_dssp EEEEECSSCEEEEEEE-TTEEEEEEECCCCC-------------------------------H----------HHHHTHH
T ss_pred EEEecCCCeEEEEEEE-CCeEEEEEEECcHHH-----------------------------HH----------HHHHHHH
Confidence 5699999999999998 588999998753211 00 1344555
Q ss_pred HHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeee-----cCCceEEeeccCCCCCCChHHHHh-cCCCHHHHHHHHHHH
Q 002031 204 NTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-----SSETVLILEFMDGIRLNDCESLEA-FGVNKQKVVEEITRA 277 (977)
Q Consensus 204 n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-----~~~~vLVmE~i~G~~L~~~~~~~~-~~~~~~~l~~~l~~~ 277 (977)
.+.++++ + .|-+++. ...-+|||||++|++|.++..... ..++...+...+.++
T Consensus 53 ~l~~l~H------------------p--nIv~~~g~~~~~~~~~~lv~ey~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i 112 (262)
T d1byga_ 53 VMTQLRH------------------S--NLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDV 112 (262)
T ss_dssp HHTTCCC------------------T--TBCCEEEEECCC--CCEEEECCCTTEEHHHHHHHHHHHHCCHHHHHHHHHHH
T ss_pred HHHhCCC------------------C--CEeeEEEEEEecCCcEEEEEeccCCCCHHHHHHhcCCCCCCHHHHHHHHHHH
Confidence 5444321 1 1222332 233589999999999998754322 235655555555554
Q ss_pred H--HHHHHhcCccccCCCCCCeEEccCCCCceEEEecccccccCH
Q 002031 278 Y--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 320 (977)
Q Consensus 278 ~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 320 (977)
. +..+|..|++|+|+||.|||++.+ +.++|+|||+++..+.
T Consensus 113 ~~al~ylH~~~ivH~dlkp~Nil~~~~--~~~kl~dfg~s~~~~~ 155 (262)
T d1byga_ 113 CEAMEYLEGNNFVHRDLAARNVLVSED--NVAKVSDFGLTKEASS 155 (262)
T ss_dssp HHHHHHHHHTTCCCSCCSGGGEEECTT--SCEEECCCCC------
T ss_pred HhhccccccCceeccccchHhheecCC--CCEeecccccceecCC
Confidence 4 778999999999999999999965 8999999999987654
|
| >d1fvra_ d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Tie2 kinase species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.40 E-value=8.7e-14 Score=151.63 Aligned_cols=143 Identities=17% Similarity=0.167 Sum_probs=93.6
Q ss_pred cccccccccEEEEEEec-CCCE--EEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCcHH
Q 002031 124 TPLATASIAQVHRATLV-DGRQ--VVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNS 200 (977)
Q Consensus 124 ~piasaSigqV~~A~l~-~G~~--VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~ 200 (977)
+.||+|+||.||+|+++ +|.. ||||..+....+. ..-+|.+
T Consensus 16 ~~iG~G~fg~Vy~~~~~~~~~~~~vaiK~~~~~~~~~------------------------------------~~~~~~~ 59 (309)
T d1fvra_ 16 DVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKD------------------------------------DHRDFAG 59 (309)
T ss_dssp EEEECGGGCEEEEEEEEETTEEEEEEEEEEECC------------------------------------------CHHHH
T ss_pred EEEeeCCCcEEEEEEECCCCeEEEEEEEEECcccChH------------------------------------HHHHHHH
Confidence 67999999999999985 5554 6677654322110 0113566
Q ss_pred HHHHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeee-cCCceEEeeccCCCCCCChHHHH---------------hcC
Q 002031 201 EAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLE---------------AFG 264 (977)
Q Consensus 201 Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLVmE~i~G~~L~~~~~~~---------------~~~ 264 (977)
|++.+.++.+ ...-+.+=.++. ....++||||++|++|.++.... ...
T Consensus 60 E~~~l~~l~~----------------HpnIv~~~~~~~~~~~~~iV~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~ 123 (309)
T d1fvra_ 60 ELEVLCKLGH----------------HPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTAST 123 (309)
T ss_dssp HHHHHTTCCC----------------CTTBCCEEEEEEETTEEEEEECCCTTCBHHHHHHTTCHHHHCHHHHHHTTBSCS
T ss_pred HHHHHHhccC----------------CCCEeeEEEEEecCCeeEEEEEecCCCcHHHHHhhccccccchhhhccccccCC
Confidence 7666655421 011122222222 45679999999999998874311 123
Q ss_pred CCHHHHHHHHHHHH--HHHHHhcCccccCCCCCCeEEccCCCCceEEEecccccccCH
Q 002031 265 VNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 320 (977)
Q Consensus 265 ~~~~~l~~~l~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 320 (977)
++...+...+.++. +..+|..|++|||+||.|||++.+ +.++|+|||+++....
T Consensus 124 l~~~~~~~~~~qia~gl~~lH~~~iiHrDlkp~NIL~~~~--~~~kl~DfG~a~~~~~ 179 (309)
T d1fvra_ 124 LSSQQLLHFAADVARGMDYLSQKQFIHRDLAARNILVGEN--YVAKIADFGLSRGQEV 179 (309)
T ss_dssp SCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECGG--GCEEECCTTCEESSCE
T ss_pred CCHHHHHHHHHHHHHHHHhhhcCCccccccccceEEEcCC--CceEEccccccccccc
Confidence 45555555454444 778999999999999999999966 8999999999876543
|
| >d3blha1 d.144.1.7 (A:8-325) Cell division protein kinase 9, CDK9 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cell division protein kinase 9, CDK9 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.37 E-value=2.1e-13 Score=148.99 Aligned_cols=143 Identities=15% Similarity=0.169 Sum_probs=90.6
Q ss_pred cccccccccEEEEEEe-cCCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCcHHHH
Q 002031 124 TPLATASIAQVHRATL-VDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (977)
Q Consensus 124 ~piasaSigqV~~A~l-~~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea 202 (977)
+.||+|++|+||+|+. .+|+.||||+.+..-... ....++.+|.
T Consensus 16 ~~LG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~~~-----------------------------------~~~~~~~~E~ 60 (318)
T d3blha1 16 AKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKE-----------------------------------GFPITALREI 60 (318)
T ss_dssp EEEEECSSSEEEEEEETTTCCEEEEEEC----CTT-----------------------------------SSCHHHHHHH
T ss_pred EEEecCcCeEEEEEEECCCCCEEEEEEEehhhcch-----------------------------------HHHHHHHHHH
Confidence 5799999999999997 589999999864321100 0011244566
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeee---------cCCceEEeeccCCCCCCChHHHHhcCCCHHHHHHH
Q 002031 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ---------SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEE 273 (977)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~---------~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~ 273 (977)
..+.++++ ...+.+-.++. ...-++||||+++..+..... .........+...
T Consensus 61 ~il~~l~h-----------------~nii~~~~~~~~~~~~~~~~~~~~~iv~e~~~~~~~~~~~~-~~~~~~~~~~~~i 122 (318)
T d3blha1 61 KILQLLKH-----------------ENVVNLIEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSN-VLVKFTLSEIKRV 122 (318)
T ss_dssp HHHHHCCC-----------------TTBCCEEEEEEC----------CEEEEEECCCEEHHHHHTC-TTCCCCHHHHHHH
T ss_pred HHHHHhcC-----------------CCccceEeeeecccccccccCceEEEEEeccCCCccchhhh-cccccccHHHHHH
Confidence 66655532 11122222221 123479999998765543211 1223444444444
Q ss_pred HHHHH--HHHHHhcCccccCCCCCCeEEccCCCCceEEEecccccccCHH
Q 002031 274 ITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSSS 321 (977)
Q Consensus 274 l~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~~ 321 (977)
+.+++ ++.+|..|++|||+||.|||++.+ +.++|.|||++..++..
T Consensus 123 ~~qil~~l~~lH~~~ivHrDlKp~NILl~~~--~~~kl~dfg~~~~~~~~ 170 (318)
T d3blha1 123 MQMLLNGLYYIHRNKILHRDMKAANVLITRD--GVLKLADFGLARAFSLA 170 (318)
T ss_dssp HHHHHHHHHHHHHTTEECCCCCGGGEEECTT--SCEEECCCTTCEECCC-
T ss_pred HHHHHHHHHHhccCCEEecCcCchheeecCC--CcEEeeecceeeecccc
Confidence 43333 788999999999999999999865 89999999999887653
|
| >d2b1pa1 d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3s) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: c-jun N-terminal kinase (jnk3s) species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.33 E-value=7.1e-13 Score=147.15 Aligned_cols=140 Identities=18% Similarity=0.231 Sum_probs=87.8
Q ss_pred cccccccccEEEEEEec-CCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCcHHHH
Q 002031 124 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (977)
Q Consensus 124 ~piasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea 202 (977)
+.||.|++|.||+|+.+ +|+.||||+.+......-. . ..+.+|.
T Consensus 23 ~~LG~G~fg~V~~~~d~~t~~~vAvK~i~~~~~~~~~--~---------------------------------~~~~~Ei 67 (355)
T d2b1pa1 23 KPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTH--A---------------------------------KRAYREL 67 (355)
T ss_dssp EECSCC--CEEEEEEETTTTEEEEEEEEESTTSSHHH--H---------------------------------HHHHHHH
T ss_pred EEeecCcCeEEEEEEECCCCCEEEEEEEChhhcCHHH--H---------------------------------HHHHHHH
Confidence 68999999999999975 7999999998654321100 0 0123455
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeee-------cCCceEEeeccCCCCCCChHHHHhcCCCHHHHHHHHH
Q 002031 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-------SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEIT 275 (977)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-------~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~ 275 (977)
..+.++.+. .-+.+=.++. .+..++||||+.|..+... ...++...+...+.
T Consensus 68 ~il~~l~hp-----------------nIv~~~~~f~~~~~~~~~~~~~iv~Ey~~~~l~~~~----~~~~~~~~i~~~~~ 126 (355)
T d2b1pa1 68 VLMKCVNHK-----------------NIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVI----QMELDHERMSYLLY 126 (355)
T ss_dssp HHHHHCCCT-----------------TBCCCSEEECSCCSTTTCCEEEEEEECCSEEHHHHH----TSCCCHHHHHHHHH
T ss_pred HHHHhcCCC-----------------CeeEEEEEEecccccccCceeEEEEeccchHHHHhh----hcCCCHHHHHHHHH
Confidence 554444220 0111111221 2345899999988655432 23466666666665
Q ss_pred HHH--HHHHHhcCccccCCCCCCeEEccCCCCceEEEecccccccCHH
Q 002031 276 RAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSSS 321 (977)
Q Consensus 276 ~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~~ 321 (977)
+++ +..+|..|++|||+||.|||++.+ +.++++|||+++..+..
T Consensus 127 qil~gl~~LH~~giiHrDlKP~Nil~~~~--~~~kl~df~~~~~~~~~ 172 (355)
T d2b1pa1 127 QMLCGIKHLHSAGIIHRDLKPSNIVVKSD--CTLKILDFGLARTAGTS 172 (355)
T ss_dssp HHHHHHHHHHHTTCCCSCCCGGGEEECTT--CCEEECCCCC-------
T ss_pred HHHHHHHHhhhcccccccCCccccccccc--cceeeechhhhhccccc
Confidence 655 888999999999999999999965 88999999998876554
|
| >d1q8ya_ d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Sky1p species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=99.08 E-value=9.1e-11 Score=129.89 Aligned_cols=151 Identities=13% Similarity=0.043 Sum_probs=84.0
Q ss_pred ccccccccccEEEEEEe-cCCCEEEEEEecCCh--hhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCcH
Q 002031 123 ETPLATASIAQVHRATL-VDGRQVVVKVQHQGI--KTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFN 199 (977)
Q Consensus 123 ~~piasaSigqV~~A~l-~~G~~VAVKv~~p~i--~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~ 199 (977)
.+.||.|++|+||+|+. .+|+.||||+.+..- .+.+..++++++.+.+. +. .
T Consensus 18 ~~~LG~G~fg~Vy~~~~~~~g~~vAvKvi~~~~~~~~~~~~Ei~~l~~l~~~-----------------------~~-~- 72 (362)
T d1q8ya_ 18 VRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGDKVYTEAAEDEIKLLQRVNDA-----------------------DN-T- 72 (362)
T ss_dssp EEEEEECSSEEEEEEEETTTTEEEEEEEECSCHHHHHHHHHHHHHHHHHHHT-----------------------CC-S-
T ss_pred EEEEeeCCCeEEEEEEECCCCCEEEEEEEeccccchHHHHHHHHHHHHhcch-----------------------hh-h-
Confidence 36799999999999997 489999999987542 12223333333322110 00 0
Q ss_pred HHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeee---cCCceEEeeccCCCCCCChHHH--HhcCCCHHHHHHHH
Q 002031 200 SEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ---SSETVLILEFMDGIRLNDCESL--EAFGVNKQKVVEEI 274 (977)
Q Consensus 200 ~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~---~~~~vLVmE~i~G~~L~~~~~~--~~~~~~~~~l~~~l 274 (977)
....+.+ ...+.+-..+. ....+++|+++.+......... .........+...+
T Consensus 73 ----~~~~~~~-----------------~~iv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~ 131 (362)
T d1q8ya_ 73 ----KEDSMGA-----------------NHILKLLDHFNHKGPNGVHVVMVFEVLGENLLALIKKYEHRGIPLIYVKQIS 131 (362)
T ss_dssp ----HHHHHHH-----------------TTBCCCCEEEEEEETTEEEEEEEECCCCEEHHHHHHHTTTSCCCHHHHHHHH
T ss_pred ----hhhhcCc-----------------CceEEEEEEeeeccccceeeeeeecccccccccccccccccCCcHHHHHHHH
Confidence 0000111 00111111111 2344667777655432222111 11233344444433
Q ss_pred HHHH--HHHHHh-cCccccCCCCCCeEEccCCC----CceEEEecccccccC
Q 002031 275 TRAY--AHQIYV-DGFFNGDPHPGNFLVSKDPP----HRPILLDFGLTKKLS 319 (977)
Q Consensus 275 ~~~~--l~~i~~-~G~~H~D~hPgNIlv~~~~~----g~i~LiDFG~~~~l~ 319 (977)
.+++ +..+|. .|++|||+||+|||++.++. ..++++|||.+....
T Consensus 132 ~qil~al~~lh~~~~IvHrDlKp~NIll~~~~~~~~~~~~kl~dfg~s~~~~ 183 (362)
T d1q8ya_ 132 KQLLLGLDYMHRRCGIIHTDIKPENVLMEIVDSPENLIQIKIADLGNACWYD 183 (362)
T ss_dssp HHHHHHHHHHHHTTCEECSCCSGGGEEEEEEETTTTEEEEEECCCTTCEETT
T ss_pred HHHHHHHHHHhhhcCcccccCChhHeeeeccCcccccceeeEeecccccccc
Confidence 3333 667786 99999999999999986522 248999999987664
|
| >d1nd4a_ d.144.1.6 (A:) Aminoglycoside 3'-phosphotransferase IIa (Kanamycin kinase) {Bacteria (Klebsiella pneumoniae) [TaxId: 573]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: APH phosphotransferases domain: Aminoglycoside 3'-phosphotransferase IIa (Kanamycin kinase) species: Bacteria (Klebsiella pneumoniae) [TaxId: 573]
Probab=98.60 E-value=6e-08 Score=100.85 Aligned_cols=78 Identities=18% Similarity=0.182 Sum_probs=55.0
Q ss_pred cCcccccccc-ccEEEEEEecCCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCcH
Q 002031 121 FVETPLATAS-IAQVHRATLVDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFN 199 (977)
Q Consensus 121 ~d~~piasaS-igqV~~A~l~~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~ 199 (977)
.+-+|++.|. -++||+....+|..++||+.+++... ++.
T Consensus 13 ~~~~~~~~G~s~~~v~r~~~~~~~~~vlK~~~~~~~~----------------------------------------~l~ 52 (255)
T d1nd4a_ 13 YDWAQQTIGCSDAAVFRLSAQGRPVLFVKTDLSGALN----------------------------------------ELQ 52 (255)
T ss_dssp CEEEECSCTTSSCEEEEEECTTSCCEEEEEECSCTTS----------------------------------------CHH
T ss_pred CceEEcCCcccCCeEEEEEeCCCCEEEEEeCCccCHh----------------------------------------HHH
Confidence 3335676655 58999999888888999998776432 234
Q ss_pred HHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeee----cCCceEEeeccCCCCCCC
Q 002031 200 SEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ----SSETVLILEFMDGIRLND 256 (977)
Q Consensus 200 ~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~----~~~~vLVmE~i~G~~L~~ 256 (977)
.|++.++.+.. ..+.||+++. ....++||||++|.++.+
T Consensus 53 ~E~~~l~~L~~------------------~gvpvP~v~~~~~~~~~~~~v~~~i~G~~~~~ 95 (255)
T d1nd4a_ 53 DEAARLSWLAT------------------TGVPCAAVLDVVTEAGRDWLLLGEVPGQDLLS 95 (255)
T ss_dssp HHHHHHHHHHT------------------TTCCBCCEEEEEECSSCEEEEEECCSSEETTT
T ss_pred HHHHHHHHHHh------------------cCCCCCceeeecccccceEEEEEeeecccccc
Confidence 55666555543 1466898875 345689999999998865
|
| >d1j7la_ d.144.1.6 (A:) Type IIIa 3',5"-aminoglycoside phosphotransferase {Enterococcus faecalis [TaxId: 1351]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: APH phosphotransferases domain: Type IIIa 3',5"-aminoglycoside phosphotransferase species: Enterococcus faecalis [TaxId: 1351]
Probab=98.28 E-value=1.5e-06 Score=90.45 Aligned_cols=35 Identities=20% Similarity=0.284 Sum_probs=27.7
Q ss_pred CccccCCCCCCeEEccCCCCceEEEecccccccCHHH
Q 002031 286 GFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSSSM 322 (977)
Q Consensus 286 G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~~~ 322 (977)
.++|+|+||+|||++++ +.+.||||+.++.-++..
T Consensus 184 ~l~HgD~~~~Nil~~~~--~~~~lIDwe~a~~g~~~~ 218 (263)
T d1j7la_ 184 VFSHGDLGDSNIFVKDG--KVSGFIDLGRSGRADKWY 218 (263)
T ss_dssp EEECSCCCTTSEEEETT--EEEEECCCTTCEEEEHHH
T ss_pred EEEEeeccCcceeecCC--ceEEEeechhcccCCHHH
Confidence 48999999999999743 345699999998765543
|
| >d1zyla1 d.144.1.6 (A:4-328) RdoA {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: APH phosphotransferases domain: RdoA species: Escherichia coli [TaxId: 562]
Probab=98.25 E-value=8.5e-07 Score=95.89 Aligned_cols=61 Identities=23% Similarity=0.188 Sum_probs=37.3
Q ss_pred CCCHHHHHHHHHHHhCCChhhcccccCccccccccccEEEEEEecCCCEEEEEEecCCh--hhhhHhhHH
Q 002031 96 PRPVQEVSQTIEREFGESMGGMFMDFVETPLATASIAQVHRATLVDGRQVVVKVQHQGI--KTIILEDLK 163 (977)
Q Consensus 96 ~~~~~~v~~~l~~elg~~~~~~f~~~d~~piasaSigqV~~A~l~~G~~VAVKv~~p~i--~~~~~~Dl~ 163 (977)
..+.+.+...++ ++|-..+.. -.|++ +.--+||++++.+|+.|++||.||+. .+++..+++
T Consensus 7 ~L~pd~i~~al~-~~g~~~~~~-----~~~L~-s~EN~vy~v~~~dg~~~VlK~~rp~~~s~~~i~~E~~ 69 (325)
T d1zyla1 7 TLHPDTIMDALF-EHGIRVDSG-----LTPLN-SYENRVYQFQDEDRRRFVVKFYRPERWTADQILEEHQ 69 (325)
T ss_dssp CCCHHHHHHHHH-HTTCCCCSC-----CEEEC-CSSSEEEEECCTTCCCEEEEEECTTTSCHHHHHHHHH
T ss_pred ccCHHHHHHHHH-HcCCCCCcC-----ccccc-cccceeEEEEcCCCCEEEEEEeCCCCCCHHHHHHHHH
Confidence 345566655544 455433221 12342 23469999999999999999999984 334444443
|
| >d2pula1 d.144.1.6 (A:5-396) Methylthioribose kinase MtnK {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: APH phosphotransferases domain: Methylthioribose kinase MtnK species: Bacillus subtilis [TaxId: 1423]
Probab=98.04 E-value=1.2e-05 Score=89.02 Aligned_cols=109 Identities=12% Similarity=0.120 Sum_probs=62.0
Q ss_pred CCCCHHHHHHHHHHHhCCChhhcccccCccccccccccEEEEEEec-CCCEEEEEEecCChhhhhHhhHHHHHHHHHHHH
Q 002031 95 PPRPVQEVSQTIEREFGESMGGMFMDFVETPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIA 173 (977)
Q Consensus 95 p~~~~~~v~~~l~~elg~~~~~~f~~~d~~piasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~ 173 (977)
-|+.-+.+.... ..+|--.. -..++-++||-|.+..||+.+.. +|+.|+||.-.|.++..
T Consensus 6 e~Lt~~~~~~la-~~lg~~~~--~~~l~~~eig~G~~N~vfrV~~~~~~~svivKqa~p~~r~~---------------- 66 (392)
T d2pula1 6 ETLNESSAVALA-VKLGLFPS--KSTLTCQEIGDGNLNYVFHIYDQEHDRALIIKQAVPYAKVV---------------- 66 (392)
T ss_dssp CCCCHHHHHHHH-HHTTC-------CCEEEECCSSSSEEEEEEEC----CEEEEEEECCGGGC-----------------
T ss_pred ccCCHHHHHHHH-HHcCCCCC--CCCeeEEEeCCCceEeEEEEEeCCCCeEEEEecCCchhccc----------------
Confidence 345544444443 34553111 12345578999999999999875 47899999777654311
Q ss_pred hhCCCCCCchhHHHHhhhcccccC-cHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeee--cCCceEEeeccC
Q 002031 174 WAEPQYDFNPIIDEWCKEAPKELD-FNSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ--SSETVLILEFMD 250 (977)
Q Consensus 174 ~~~~~~~~~~~~~e~~~~l~~Eld-~~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~--~~~~vLVmE~i~ 250 (977)
.+.+. .-++ ...|++.+..+.. ..+..+|+++. ....++||||++
T Consensus 67 --g~~~~-------------~~~~R~~~E~~~L~~~~~-----------------~~p~~vP~v~~~d~~~~~lvmE~L~ 114 (392)
T d2pula1 67 --GESWP-------------LTIDRARIESSALIRQGE-----------------HVPHLVPRVFYSDTEMAVTVMEDLS 114 (392)
T ss_dssp ---CCCC-------------CCTTHHHHHHHHHHHHHT-----------------TCGGGSCCEEEEETTTTEEEECCCT
T ss_pred --CCCCC-------------CCHHHHHHHHHHHHHhhh-----------------hCCCCcceEEEEcCCCCEEEEeccC
Confidence 00000 0011 2346666555543 22456899886 567899999999
Q ss_pred CCCC
Q 002031 251 GIRL 254 (977)
Q Consensus 251 G~~L 254 (977)
|..+
T Consensus 115 ~~~~ 118 (392)
T d2pula1 115 HLKI 118 (392)
T ss_dssp TSEE
T ss_pred Cccc
Confidence 8665
|
| >d1tvfa2 e.3.1.1 (A:15-315) Pencillin binding protein 4 (PbpD), N-terminal domain {Staphylococcus aureus [TaxId: 1280]} | Back information, alignment and structure |
|---|
class: Multi-domain proteins (alpha and beta) fold: beta-lactamase/transpeptidase-like superfamily: beta-lactamase/transpeptidase-like family: beta-Lactamase/D-ala carboxypeptidase domain: Pencillin binding protein 4 (PbpD), N-terminal domain species: Staphylococcus aureus [TaxId: 1280]
Probab=97.88 E-value=5.6e-05 Score=79.87 Aligned_cols=53 Identities=21% Similarity=0.251 Sum_probs=44.5
Q ss_pred cceEEEEEecCeeEEEeeccccCCCCCCCCCCCCcceeecchHHHHHHHHHHHHHCCCcCcCCchh
Q 002031 496 LGIQVCAYKDGEVIIDTSAGMLGRYDPRPVQPDSLFPVFSVTKGITAGMLHWLVDNGKLKLEENIA 561 (977)
Q Consensus 496 pG~svaVv~~g~~v~~~~~G~~~~~~~~~~t~~T~f~i~SiTK~~ta~~v~~lv~~G~l~ld~~v~ 561 (977)
|..+|.+..-|+++|++ +++..+++||+||.+|+.+++..+++|+++||++|.
T Consensus 35 ~~a~iv~~~TG~VLy~k-------------Na~~~~~pAS~tKlMTa~v~le~i~~g~~~l~~~v~ 87 (301)
T d1tvfa2 35 PTSAVNVSQTGQLLYQY-------------NIDTKWNPASMTKLMTMYLTLEAVNKGQLSLDDTVT 87 (301)
T ss_dssp CSEEEEEETTSBEEEEE-------------STTCCBCCGGGHHHHHHHHHHHHHHTTSSCTTCEEE
T ss_pred cceEEEEcCCCcEehee-------------CcCCCcCchHHHHHHHHHHHHHHHhcCCCCcccCeE
Confidence 44555556889999864 456789999999999999999999999999999874
|
| >d1es5a_ e.3.1.1 (A:) D-ala carboxypeptidase/transpeptidase {Streptomyces sp., K15 [TaxId: 1931]} | Back information, alignment and structure |
|---|
class: Multi-domain proteins (alpha and beta) fold: beta-lactamase/transpeptidase-like superfamily: beta-lactamase/transpeptidase-like family: beta-Lactamase/D-ala carboxypeptidase domain: D-ala carboxypeptidase/transpeptidase species: Streptomyces sp., K15 [TaxId: 1931]
Probab=97.59 E-value=0.00019 Score=74.17 Aligned_cols=50 Identities=20% Similarity=0.242 Sum_probs=38.1
Q ss_pred cceEEEEE--ecCeeEEEeeccccCCCCCCCCCCCCcceeecchHHHHHHHHHHHHHCCCcCcCCchh
Q 002031 496 LGIQVCAY--KDGEVIIDTSAGMLGRYDPRPVQPDSLFPVFSVTKGITAGMLHWLVDNGKLKLEENIA 561 (977)
Q Consensus 496 pG~svaVv--~~g~~v~~~~~G~~~~~~~~~~t~~T~f~i~SiTK~~ta~~v~~lv~~G~l~ld~~v~ 561 (977)
.+-+..|+ ..|+++|++ +++..+++||+||.+|+.++ +++|+++||++|.
T Consensus 5 ~A~~aiv~D~~tG~vL~~k-------------na~~~~~~AS~tKlmTa~v~---l~~~~~~ld~~vt 56 (260)
T d1es5a_ 5 AAVGGYAMNNGTGTTLYTK-------------AADTRRSTGSTTKIMTAKVV---LAQSNLNLDAKVT 56 (260)
T ss_dssp SCSEEEEEETTTCCEEEEE-------------STTCCBCCGGGGHHHHHHHH---HTCTTCCTTCEEE
T ss_pred cceEEEEEECCCCcEeeeE-------------CcCCCcCCHHHHHHHHHHHH---HHcCCCCCCceEE
Confidence 33344455 448888864 45788999999999999886 4889999999874
|
| >d1iysa_ e.3.1.1 (A:) beta-Lactamase, class A {Escherichia coli, TOHO-1 [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Multi-domain proteins (alpha and beta) fold: beta-lactamase/transpeptidase-like superfamily: beta-lactamase/transpeptidase-like family: beta-Lactamase/D-ala carboxypeptidase domain: beta-Lactamase, class A species: Escherichia coli, TOHO-1 [TaxId: 562]
Probab=97.55 E-value=0.0016 Score=66.72 Aligned_cols=37 Identities=19% Similarity=0.231 Sum_probs=33.8
Q ss_pred CCCCcceeecchHHHHHHHHHHHHHCCCcCcCCchhh
Q 002031 526 QPDSLFPVFSVTKGITAGMLHWLVDNGKLKLEENIAN 562 (977)
Q Consensus 526 t~~T~f~i~SiTK~~ta~~v~~lv~~G~l~ld~~v~~ 562 (977)
++|..|+.||++|.+++++++..+++|++++|++|.-
T Consensus 34 n~d~~~~~AS~~Kl~~~~~~l~~v~~g~l~~~~~v~~ 70 (261)
T d1iysa_ 34 RADERFAMCSTSKVMAAAAVLKQSESDKHLLNQRVEI 70 (261)
T ss_dssp STTSCEECGGGGHHHHHHHHHHHHTSCTTSTTCEEEC
T ss_pred CCCCcCccHHHHHHHHHHHHHHhhhcCCCCcCceEEE
Confidence 4578899999999999999999999999999998753
|
| >d3beca2 e.3.1.1 (A:4-262) Penicillin-binding protein 5, N-terminal domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Multi-domain proteins (alpha and beta) fold: beta-lactamase/transpeptidase-like superfamily: beta-lactamase/transpeptidase-like family: beta-Lactamase/D-ala carboxypeptidase domain: Penicillin-binding protein 5, N-terminal domain species: Escherichia coli [TaxId: 562]
Probab=97.44 E-value=0.00036 Score=71.98 Aligned_cols=52 Identities=19% Similarity=0.196 Sum_probs=41.6
Q ss_pred ceEEEEE--ecCeeEEEeeccccCCCCCCCCCCCCcceeecchHHHHHHHHHHHHHCCCcCcCCchh
Q 002031 497 GIQVCAY--KDGEVIIDTSAGMLGRYDPRPVQPDSLFPVFSVTKGITAGMLHWLVDNGKLKLEENIA 561 (977)
Q Consensus 497 G~svaVv--~~g~~v~~~~~G~~~~~~~~~~t~~T~f~i~SiTK~~ta~~v~~lv~~G~l~ld~~v~ 561 (977)
+-+..|+ ..|+++|++ +++.+.++||+||.+|+.+++..+++|++++++.|.
T Consensus 14 a~saiv~D~~tg~vL~~k-------------n~~~~~~~ASlTKlMTa~v~l~~~~~~~l~~~~~v~ 67 (259)
T d3beca2 14 AESYILIDYNSGKVLAEQ-------------NADVRRDPASLTKMMTSYVIGQAMKAGKFKETDLVT 67 (259)
T ss_dssp EEEEEEEETTTCCEEEEE-------------STTCCBCCGGGHHHHHHHHHHHHHHTTSCCTTCEEE
T ss_pred ceEEEEEECCCCcEeeeE-------------CcCCCcCChHHHHHHHHHHHHHHHHhCCCCccccee
Confidence 3344555 347888864 456779999999999999999999999999998764
|
| >d2ppqa1 d.144.1.6 (A:5-320) Homoserine kinase ThrB {Agrobacterium tumefaciens [TaxId: 358]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: APH phosphotransferases domain: Homoserine kinase ThrB species: Agrobacterium tumefaciens [TaxId: 358]
Probab=97.29 E-value=0.00046 Score=73.16 Aligned_cols=51 Identities=6% Similarity=0.121 Sum_probs=32.2
Q ss_pred CCCHHHHHHHHHHHhCCChhhcccccCccccccccccEEEEEEecCCCEEEEEEecCC
Q 002031 96 PRPVQEVSQTIEREFGESMGGMFMDFVETPLATASIAQVHRATLVDGRQVVVKVQHQG 153 (977)
Q Consensus 96 ~~~~~~v~~~l~~elg~~~~~~f~~~d~~piasaSigqV~~A~l~~G~~VAVKv~~p~ 153 (977)
+.+.++++.++.. ++ +.++ .+ -++|.+|..-+.|+.+..+|+ .++||.+++
T Consensus 2 ~ls~~el~~~l~~-Y~--lg~~-~~--~~~i~~G~~N~ny~v~t~~g~-yVLri~~~~ 52 (316)
T d2ppqa1 2 DITEDELRNFLTQ-YD--VGSL-TS--YKGIAEGVENSNFLLHTTKDP-LILTLYEKR 52 (316)
T ss_dssp CCCHHHHHHHHTT-BC--CCCE-EE--EEEECC---EEEEEEEESSCC-EEEEEECC-
T ss_pred CCCHHHHHHHHHh-CC--CCCc-eE--eecCCCCcccCeEEEEECCCc-EEEEEcCCC
Confidence 4566777777754 54 3232 22 368899999999999876654 899997664
|
| >d1e25a_ e.3.1.1 (A:) beta-Lactamase, class A {Pseudomonas aeruginosa, PER-1 [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Multi-domain proteins (alpha and beta) fold: beta-lactamase/transpeptidase-like superfamily: beta-lactamase/transpeptidase-like family: beta-Lactamase/D-ala carboxypeptidase domain: beta-Lactamase, class A species: Pseudomonas aeruginosa, PER-1 [TaxId: 287]
Probab=97.28 E-value=0.00065 Score=70.43 Aligned_cols=37 Identities=35% Similarity=0.395 Sum_probs=34.5
Q ss_pred CCCCcceeecchHHHHHHHHHHHHHCCCcCcCCchhh
Q 002031 526 QPDSLFPVFSVTKGITAGMLHWLVDNGKLKLEENIAN 562 (977)
Q Consensus 526 t~~T~f~i~SiTK~~ta~~v~~lv~~G~l~ld~~v~~ 562 (977)
++++.|+.||++|.+|+++++..+++|+++||++|.-
T Consensus 35 n~~~~~p~AS~~Kl~~~~~~l~~i~~g~l~l~~~v~~ 71 (278)
T d1e25a_ 35 NPFEKFPMQSVFKLHLAMLVLHQVDQGKLDLNQTVIV 71 (278)
T ss_dssp STTCCEECGGGHHHHHHHHHHHHHHTTSSCTTCEEEE
T ss_pred CCCCeeccHHHHHHHHHHHHHHHHHcCCCCchhhccc
Confidence 6788999999999999999999999999999999853
|
| >d1o7ea_ e.3.1.1 (A:) beta-Lactamase, class A {Stenotrophomonas maltophilia, L2 [TaxId: 40324]} | Back information, alignment and structure |
|---|
class: Multi-domain proteins (alpha and beta) fold: beta-lactamase/transpeptidase-like superfamily: beta-lactamase/transpeptidase-like family: beta-Lactamase/D-ala carboxypeptidase domain: beta-Lactamase, class A species: Stenotrophomonas maltophilia, L2 [TaxId: 40324]
Probab=97.26 E-value=0.00064 Score=70.39 Aligned_cols=36 Identities=19% Similarity=0.261 Sum_probs=33.6
Q ss_pred CCCCcceeecchHHHHHHHHHHHHHCCCcCcCCchh
Q 002031 526 QPDSLFPVFSVTKGITAGMLHWLVDNGKLKLEENIA 561 (977)
Q Consensus 526 t~~T~f~i~SiTK~~ta~~v~~lv~~G~l~ld~~v~ 561 (977)
..|+.|++||++|.+++++++..+++|+++||++|.
T Consensus 38 ~~d~~~p~AS~~Kl~~~~~~l~~~~~g~~~ld~~v~ 73 (267)
T d1o7ea_ 38 RQDERFPMCSTFKSMLAATVLSQAERMPALLDRRVP 73 (267)
T ss_dssp STTSCEECGGGGHHHHHHHHHHHHTTCTTTTTCEEE
T ss_pred CCCCccccHHHHHHHHHHHHHHHhhcCCCCCCcEEE
Confidence 567889999999999999999999999999999874
|
| >d1xp4a2 e.3.1.1 (A:25-293) D,D-carboxypeptidase DacA, N-terminal domain {Streptococcus pneumoniae [TaxId: 1313]} | Back information, alignment and structure |
|---|
class: Multi-domain proteins (alpha and beta) fold: beta-lactamase/transpeptidase-like superfamily: beta-lactamase/transpeptidase-like family: beta-Lactamase/D-ala carboxypeptidase domain: D,D-carboxypeptidase DacA, N-terminal domain species: Streptococcus pneumoniae [TaxId: 1313]
Probab=97.15 E-value=0.0022 Score=66.20 Aligned_cols=45 Identities=20% Similarity=0.343 Sum_probs=39.1
Q ss_pred ecCeeEEEeeccccCCCCCCCCCCCCcceeecchHHHHHHHHHHHHHCCCcCcCCchh
Q 002031 504 KDGEVIIDTSAGMLGRYDPRPVQPDSLFPVFSVTKGITAGMLHWLVDNGKLKLEENIA 561 (977)
Q Consensus 504 ~~g~~v~~~~~G~~~~~~~~~~t~~T~f~i~SiTK~~ta~~v~~lv~~G~l~ld~~v~ 561 (977)
..|+++|++ +++...++||+||.+|+.+++..+++|+|+++++|.
T Consensus 14 ~tG~vL~~k-------------n~~~~~~pAS~TKlmTa~v~le~l~~g~l~~~~~v~ 58 (269)
T d1xp4a2 14 NTGKILYEK-------------DATQPVEIASITKLITVYLVYEALENGSITLSTPVD 58 (269)
T ss_dssp TTTEEEEEE-------------SCSSCEECGGGGHHHHHHHHHHHHHHTSSCTTCEEE
T ss_pred CCCCEeeee-------------CcCCCcCCHHHHHHHHHHHHHHHHHcCCCCcccccc
Confidence 458888864 447789999999999999999999999999999875
|
| >d1bsga_ e.3.1.1 (A:) beta-Lactamase, class A {Streptomyces albus G [TaxId: 1962]} | Back information, alignment and structure |
|---|
class: Multi-domain proteins (alpha and beta) fold: beta-lactamase/transpeptidase-like superfamily: beta-lactamase/transpeptidase-like family: beta-Lactamase/D-ala carboxypeptidase domain: beta-Lactamase, class A species: Streptomyces albus G [TaxId: 1962]
Probab=97.15 E-value=0.0067 Score=62.07 Aligned_cols=35 Identities=29% Similarity=0.382 Sum_probs=33.1
Q ss_pred CCCCcceeecchHHHHHHHHHHHHHCCCcCcCCch
Q 002031 526 QPDSLFPVFSVTKGITAGMLHWLVDNGKLKLEENI 560 (977)
Q Consensus 526 t~~T~f~i~SiTK~~ta~~v~~lv~~G~l~ld~~v 560 (977)
++|..|+.||++|.++++++++.+++|+++|++++
T Consensus 34 n~d~~~~~AS~~Kl~~~~~~l~~~~~g~~~~~~~~ 68 (266)
T d1bsga_ 34 RADELFPMCSVFKTLSSAAVLRDLDRNGEFLSRRI 68 (266)
T ss_dssp STTSCEECGGGGHHHHHHHHHHHTCSSSTTTTCEE
T ss_pred CCCCccccHHHHHHHHHHHHHHHhhcCCCccceee
Confidence 56889999999999999999999999999999987
|
| >d1n9ba_ e.3.1.1 (A:) beta-Lactamase, class A {Klebsiella pneumoniae, SHV-2 [TaxId: 573]} | Back information, alignment and structure |
|---|
class: Multi-domain proteins (alpha and beta) fold: beta-lactamase/transpeptidase-like superfamily: beta-lactamase/transpeptidase-like family: beta-Lactamase/D-ala carboxypeptidase domain: beta-Lactamase, class A species: Klebsiella pneumoniae, SHV-2 [TaxId: 573]
Probab=97.14 E-value=0.0023 Score=65.76 Aligned_cols=45 Identities=29% Similarity=0.412 Sum_probs=39.7
Q ss_pred ecCeeEEEeeccccCCCCCCCCCCCCcceeecchHHHHHHHHHHHHHCCCcCcCCchh
Q 002031 504 KDGEVIIDTSAGMLGRYDPRPVQPDSLFPVFSVTKGITAGMLHWLVDNGKLKLEENIA 561 (977)
Q Consensus 504 ~~g~~v~~~~~G~~~~~~~~~~t~~T~f~i~SiTK~~ta~~v~~lv~~G~l~ld~~v~ 561 (977)
..|++++. + ++|+.|+.||++|.+++++++..+++|++++|++|.
T Consensus 27 ~tG~~l~~--~-----------n~d~~~~~AS~~Kl~~a~~~l~~v~~g~~~~~~~v~ 71 (265)
T d1n9ba_ 27 ASGRTLTA--W-----------RADERFPMMSTFKVVLCGAVLARVDAGDEQLERKIH 71 (265)
T ss_dssp TTCCEEEE--E-----------STTSCEECGGGHHHHHHHHHHHHHHTTSCCTTCEEC
T ss_pred CCCcEeee--E-----------CCCCccccHHHHHHHHHHHHHHHHhcCCCCCceEEE
Confidence 67777753 2 668899999999999999999999999999999985
|
| >d2cc1a1 e.3.1.1 (A:27-293) beta-Lactamase, class A {Mycobacterium fortuitum [TaxId: 1766]} | Back information, alignment and structure |
|---|
class: Multi-domain proteins (alpha and beta) fold: beta-lactamase/transpeptidase-like superfamily: beta-lactamase/transpeptidase-like family: beta-Lactamase/D-ala carboxypeptidase domain: beta-Lactamase, class A species: Mycobacterium fortuitum [TaxId: 1766]
Probab=97.11 E-value=0.0013 Score=67.65 Aligned_cols=36 Identities=25% Similarity=0.543 Sum_probs=33.7
Q ss_pred CCCCcceeecchHHHHHHHHHHHHHCCCcCcCCchh
Q 002031 526 QPDSLFPVFSVTKGITAGMLHWLVDNGKLKLEENIA 561 (977)
Q Consensus 526 t~~T~f~i~SiTK~~ta~~v~~lv~~G~l~ld~~v~ 561 (977)
++|..|+.||++|.++++++++.+++|++++|++|.
T Consensus 34 n~d~~~~~AS~~Kl~~a~~~l~~~~~g~~~~~~~v~ 69 (262)
T d2cc1a1 34 RPDEMFAMCSTFKGYVAARVLQMAEHGEISLDNRVF 69 (262)
T ss_dssp STTSCEECGGGHHHHHHHHHHHHHHTTSSCTTCEEE
T ss_pred CCCCcCccHHHHHHHHHHHHHHHhhccCcccCceEE
Confidence 568899999999999999999999999999999874
|
| >d1nw1a_ d.144.1.8 (A:) Choline kinase {Caenorhabditis elegans [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Choline kinase domain: Choline kinase species: Caenorhabditis elegans [TaxId: 6239]
Probab=97.07 E-value=0.00059 Score=74.92 Aligned_cols=99 Identities=12% Similarity=0.114 Sum_probs=67.2
Q ss_pred HHHHHHHHHHhCCChhhc-ccccCccccccccccEEEEEEecC--------CCEEEEEEecCChhhhhHhhHHHHHHHHH
Q 002031 100 QEVSQTIEREFGESMGGM-FMDFVETPLATASIAQVHRATLVD--------GRQVVVKVQHQGIKTIILEDLKNAKSIVD 170 (977)
Q Consensus 100 ~~v~~~l~~elg~~~~~~-f~~~d~~piasaSigqV~~A~l~~--------G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~ 170 (977)
+.++.++.+.++..|..+ .++++-++|+.|-.-++|+....+ ++.|+++|-- +...
T Consensus 23 ~~~~~~~~~~l~~~W~~~~~~~l~v~~l~GGltN~~y~v~~~~~~~~~~~~~~~vllRi~g-~~~~-------------- 87 (395)
T d1nw1a_ 23 ERAHMLCARFLGGAWKTVPLEHLRISRIKGGMSNMLFLCRLSEVYPPIRNEPNKVLLRVYF-NPET-------------- 87 (395)
T ss_dssp HHHHHHHHHHHCTHHHHCCGGGEEEEEECCCTTEEEEEEEECTTSCCSSSCCSEEEEEEEC-SCCC--------------
T ss_pred HHHHHHHHHhCcccccCCCccceEEEEcCCccccceEEEEeCCCCccccCCCCcEEEEecC-Ccch--------------
Confidence 446667777788777553 235666899999999999998753 3678888743 2111
Q ss_pred HHHhhCCCCCCchhHHHHhhhcccccCcHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeeecCCceEEeeccC
Q 002031 171 WIAWAEPQYDFNPIIDEWCKEAPKELDFNSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQSSETVLILEFMD 250 (977)
Q Consensus 171 ~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~~~~~vLVmE~i~ 250 (977)
.+|..+|.+++..+.+. ++ .|+++......+||||++
T Consensus 88 ------------------------~idr~~E~~i~~~ls~~------------------gl-~Pkll~~~~~g~I~efi~ 124 (395)
T d1nw1a_ 88 ------------------------ESHLVAESVIFTLLSER------------------HL-GPKLYGIFSGGRLEEYIP 124 (395)
T ss_dssp ------------------------HHHHHHHHHHHHHHHHT------------------TS-SSCEEEEETTEEEECCCC
T ss_pred ------------------------hhHHHHHHHHHHHHHhC------------------CC-CCeEEEEcCCceEEEEec
Confidence 11234566676666541 23 688888666789999999
Q ss_pred CCCCCC
Q 002031 251 GIRLND 256 (977)
Q Consensus 251 G~~L~~ 256 (977)
|.++..
T Consensus 125 g~~l~~ 130 (395)
T d1nw1a_ 125 SRPLSC 130 (395)
T ss_dssp EEECCT
T ss_pred cccCCh
Confidence 988764
|
| >d1djaa_ e.3.1.1 (A:) beta-Lactamase, class A {Staphylococcus aureus [TaxId: 1280]} | Back information, alignment and structure |
|---|
class: Multi-domain proteins (alpha and beta) fold: beta-lactamase/transpeptidase-like superfamily: beta-lactamase/transpeptidase-like family: beta-Lactamase/D-ala carboxypeptidase domain: beta-Lactamase, class A species: Staphylococcus aureus [TaxId: 1280]
Probab=97.05 E-value=0.0036 Score=64.00 Aligned_cols=29 Identities=28% Similarity=0.302 Sum_probs=26.1
Q ss_pred CCCCcceeecchHHHHHHHHHHHHHCCCc
Q 002031 526 QPDSLFPVFSVTKGITAGMLHWLVDNGKL 554 (977)
Q Consensus 526 t~~T~f~i~SiTK~~ta~~v~~lv~~G~l 554 (977)
+.|..|+.||++|.+|+++++..+++|+|
T Consensus 31 n~d~~~~~AS~~Kl~~a~~~l~~~~~~~L 59 (258)
T d1djaa_ 31 NSDKRFAYASTSHAINSAILLEQVPYNKL 59 (258)
T ss_dssp STTSCEECGGGHHHHHHHHHHTSSCGGGT
T ss_pred CCCCcCccHHHHHHHHHHHHHHhccccCc
Confidence 56888999999999999999999988875
|
| >d1m40a_ e.3.1.1 (A:) beta-Lactamase, class A {Escherichia coli, TEM-1 [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Multi-domain proteins (alpha and beta) fold: beta-lactamase/transpeptidase-like superfamily: beta-lactamase/transpeptidase-like family: beta-Lactamase/D-ala carboxypeptidase domain: beta-Lactamase, class A species: Escherichia coli, TEM-1 [TaxId: 562]
Probab=97.05 E-value=0.002 Score=66.28 Aligned_cols=36 Identities=31% Similarity=0.478 Sum_probs=33.4
Q ss_pred CCCCcceeecchHHHHHHHHHHHHHCCCcCcCCchh
Q 002031 526 QPDSLFPVFSVTKGITAGMLHWLVDNGKLKLEENIA 561 (977)
Q Consensus 526 t~~T~f~i~SiTK~~ta~~v~~lv~~G~l~ld~~v~ 561 (977)
++|..|+.||++|.+++++++..++.|++++|++|.
T Consensus 36 n~d~~~p~AS~~Kl~~~~~~l~~v~~g~~~~~~~v~ 71 (263)
T d1m40a_ 36 RPEERFPMMSTFKVLLCGAVLSRVDAGQEQLGRRIH 71 (263)
T ss_dssp STTSCEECGGGHHHHHHHHHHHHHHTTSCCTTCEEC
T ss_pred CCCCcccchHHHHHHHHHHHHHhhhcCCcCCCceEE
Confidence 567789999999999999999999999999999983
|
| >d1g6aa_ e.3.1.1 (A:) beta-Lactamase, class A {Pseudomonas aeruginosa, PSE-4 carbenicillinase [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Multi-domain proteins (alpha and beta) fold: beta-lactamase/transpeptidase-like superfamily: beta-lactamase/transpeptidase-like family: beta-Lactamase/D-ala carboxypeptidase domain: beta-Lactamase, class A species: Pseudomonas aeruginosa, PSE-4 carbenicillinase [TaxId: 287]
Probab=96.77 E-value=0.0056 Score=62.80 Aligned_cols=36 Identities=22% Similarity=0.374 Sum_probs=33.5
Q ss_pred CCCCcceeecchHHHHHHHHHHHHHCCCcCcCCchh
Q 002031 526 QPDSLFPVFSVTKGITAGMLHWLVDNGKLKLEENIA 561 (977)
Q Consensus 526 t~~T~f~i~SiTK~~ta~~v~~lv~~G~l~ld~~v~ 561 (977)
+++..|+.||++|.++++++++.+++|++++++++.
T Consensus 37 n~~~~~p~AS~~Kl~~a~~~l~~~~~g~l~~~~~i~ 72 (266)
T d1g6aa_ 37 NGNQRFPLTSTFKTIACAKLLYDAEQGKVNPNSTVE 72 (266)
T ss_dssp STTSCEECGGGGHHHHHHHHHHHHHTTSCCTTCEEE
T ss_pred CCCCeecchHHHHHHHHHHHHHHHHcCCCCccceEE
Confidence 567889999999999999999999999999999984
|
| >d1i2sa_ e.3.1.1 (A:) beta-Lactamase, class A {Bacillus licheniformis [TaxId: 1402]} | Back information, alignment and structure |
|---|
class: Multi-domain proteins (alpha and beta) fold: beta-lactamase/transpeptidase-like superfamily: beta-lactamase/transpeptidase-like family: beta-Lactamase/D-ala carboxypeptidase domain: beta-Lactamase, class A species: Bacillus licheniformis [TaxId: 1402]
Probab=96.07 E-value=0.014 Score=59.17 Aligned_cols=33 Identities=30% Similarity=0.407 Sum_probs=27.1
Q ss_pred CCCCcceeecchHHHHHHHHHHHHHCCCcCcCCch
Q 002031 526 QPDSLFPVFSVTKGITAGMLHWLVDNGKLKLEENI 560 (977)
Q Consensus 526 t~~T~f~i~SiTK~~ta~~v~~lv~~G~l~ld~~v 560 (977)
+++..|+.||++|.++++++++.+++|+| |++|
T Consensus 30 n~d~~~~~AS~~Kl~~~~~~l~~~~~g~L--d~~v 62 (255)
T d1i2sa_ 30 RPDERFAFASTIKALTVGVLLQQKSIEDL--NQRI 62 (255)
T ss_dssp STTCCEECGGGHHHHHHHHHHHHSCTGGG--GCEE
T ss_pred CCCCcCccHHHHHHHHHHHHHHHcccCCC--ccce
Confidence 45888999999999999999988877754 5543
|
| >d1buea_ e.3.1.1 (A:) beta-Lactamase, class A {Enterobacter cloacae, NMC-A carbapenemase [TaxId: 550]} | Back information, alignment and structure |
|---|
class: Multi-domain proteins (alpha and beta) fold: beta-lactamase/transpeptidase-like superfamily: beta-lactamase/transpeptidase-like family: beta-Lactamase/D-ala carboxypeptidase domain: beta-Lactamase, class A species: Enterobacter cloacae, NMC-A carbapenemase [TaxId: 550]
Probab=94.63 E-value=0.028 Score=57.07 Aligned_cols=36 Identities=22% Similarity=0.343 Sum_probs=33.4
Q ss_pred CCCCcceeecchHHHHHHHHHHHHHCCCcCcCCchh
Q 002031 526 QPDSLFPVFSVTKGITAGMLHWLVDNGKLKLEENIA 561 (977)
Q Consensus 526 t~~T~f~i~SiTK~~ta~~v~~lv~~G~l~ld~~v~ 561 (977)
+++..|+.||++|.+++.++++.+++|+++|+++|.
T Consensus 35 n~~~~~p~AS~~Kl~~a~~~l~~i~~g~~~~~~~v~ 70 (265)
T d1buea_ 35 RANERFPLCSSFKGFLAAAVLKGSQDNRLNLNQIVN 70 (265)
T ss_dssp STTSCEECGGGGHHHHHHHHHHHHHTTSSCTTCEEC
T ss_pred CCCCccccHHHHHHHHHHHHHHHhhcCCCCcccceE
Confidence 457889999999999999999999999999999874
|
| >d1pyya4 e.3.1.1 (A:264-631) Penicillin-binding protein 2x (pbp-2x), transpeptidase domain {Streptococcus pneumoniae [TaxId: 1313]} | Back information, alignment and structure |
|---|
class: Multi-domain proteins (alpha and beta) fold: beta-lactamase/transpeptidase-like superfamily: beta-lactamase/transpeptidase-like family: beta-Lactamase/D-ala carboxypeptidase domain: Penicillin-binding protein 2x (pbp-2x), transpeptidase domain species: Streptococcus pneumoniae [TaxId: 1313]
Probab=92.48 E-value=0.56 Score=49.59 Aligned_cols=82 Identities=13% Similarity=0.026 Sum_probs=45.6
Q ss_pred hHHHHHHHHHHHhccCCCccceEEEEE--ecCeeEEEeeccccC------CCCCCCC---CCCCcceeecchHHHHHHHH
Q 002031 477 DVEAKLRDFLVELGNDGKILGIQVCAY--KDGEVIIDTSAGMLG------RYDPRPV---QPDSLFPVFSVTKGITAGML 545 (977)
Q Consensus 477 ~~~~~l~~~l~~~~~~~~~pG~svaVv--~~g~~v~~~~~G~~~------~~~~~~~---t~~T~f~i~SiTK~~ta~~v 545 (977)
.++..+++.+++.+++..-...++.|+ +.|+++.-..+-.-| .....+. .....|.-||+-|.||+++.
T Consensus 5 ~lQ~~~e~~l~~~~~~~~~~~~~~vv~d~~TG~IlAmas~P~~dpn~~~~~~~~~~~~n~a~~~~~~PGStfKp~~~aaa 84 (368)
T d1pyya4 5 PLQSFMETQMDAFQEKVKGKYMTATLVSAKTGEILATTQRPTFDADTKEGITEDFVWRDILYQSNYEPGSAFKVMMLAAA 84 (368)
T ss_dssp HHHHHHHHHHHHHHHHHCCSEEEEEEEETTTTEEEEEEEESCCCTTTCTTCCTTCCCCCHHHHCCBCCGGGGHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhCCceEEEEEEECCCCcEEEEEeCCCCCcccccCccchhhhhhhhhhCccCCcchhhhHHHHHh
Confidence 444555555555444333344455555 678888754321111 1111111 11246788999999987765
Q ss_pred HHHHHCCCcCcCCchh
Q 002031 546 HWLVDNGKLKLEENIA 561 (977)
Q Consensus 546 ~~lv~~G~l~ld~~v~ 561 (977)
+|+|.++.++.+.
T Consensus 85 ---Le~g~~~~~~~~~ 97 (368)
T d1pyya4 85 ---IDNNTFPGGEVFN 97 (368)
T ss_dssp ---HHTTCCCTTCEEE
T ss_pred ---hhccccccccccc
Confidence 5889988776543
|
| >d2olua2 e.3.1.1 (A:293-692) Penicillin-binding protein 2, PBP2 {Staphylococcus aureus [TaxId: 1280]} | Back information, alignment and structure |
|---|
class: Multi-domain proteins (alpha and beta) fold: beta-lactamase/transpeptidase-like superfamily: beta-lactamase/transpeptidase-like family: beta-Lactamase/D-ala carboxypeptidase domain: Penicillin-binding protein 2, PBP2 species: Staphylococcus aureus [TaxId: 1280]
Probab=86.60 E-value=2.8 Score=44.49 Aligned_cols=83 Identities=19% Similarity=0.048 Sum_probs=46.5
Q ss_pred cchHHHHHHHHHHHhccCC-CccceEEEEE--ecCeeEEEeeccccCCCCCC-CCCCCCcceeecchHHHHHHHHHHHHH
Q 002031 475 HSDVEAKLRDFLVELGNDG-KILGIQVCAY--KDGEVIIDTSAGMLGRYDPR-PVQPDSLFPVFSVTKGITAGMLHWLVD 550 (977)
Q Consensus 475 ~~~~~~~l~~~l~~~~~~~-~~pG~svaVv--~~g~~v~~~~~G~~~~~~~~-~~t~~T~f~i~SiTK~~ta~~v~~lv~ 550 (977)
..++++.+++.+++..... .-..+++.|+ +.|+++.- .|..+..... .......|..||+-|.|++.++ +.|
T Consensus 44 D~~lQ~~ae~~l~~~~~~~~~~~~~a~vvvd~~TG~IlAm--~~~~~y~~~~~~n~~~~~~~pGStfKp~v~~aa--ale 119 (400)
T d2olua2 44 DKDVQKTLQNDVDNGSFYKNKDQQVGATILDSKTGGLVAI--SGGRDFKDVVNRNQATDPHPTGSSLKPFLAYGP--AIE 119 (400)
T ss_dssp CHHHHHHHHHHHHHCSCCSSTTEEEEEEEEETTTCBEEEE--ECSTTCCTTTSCCTTTSCEECGGGGHHHHTHHH--HHH
T ss_pred CHHHHHHHHHHHHhhhhccCcCceEEEEEEECCCCcEEEE--EECCCCCcchhhhhhhhccccccccccHHHHHH--Hhh
Confidence 4456666666666543211 1122344444 57888764 3434432211 1122346999999999865433 257
Q ss_pred CCCcCcCCchh
Q 002031 551 NGKLKLEENIA 561 (977)
Q Consensus 551 ~G~l~ld~~v~ 561 (977)
.|.++.++.+.
T Consensus 120 ~g~~~~~~~~~ 130 (400)
T d2olua2 120 NMKWATNHAIQ 130 (400)
T ss_dssp HTCCCTTBEEE
T ss_pred cCCeecceecc
Confidence 88888777654
|