Query 002039
Match_columns 977
No_of_seqs 544 out of 4688
Neff 7.8
Searched_HMMs 46136
Date Thu Mar 28 15:07:58 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/002039.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/002039hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 COG0661 AarF Predicted unusual 100.0 8.7E-73 1.9E-77 654.4 40.3 385 44-461 51-442 (517)
2 PRK04750 ubiB putative ubiquin 100.0 2.6E-69 5.7E-74 630.1 40.4 427 7-464 4-444 (537)
3 TIGR01982 UbiB 2-polyprenylphe 100.0 7.8E-66 1.7E-70 596.6 41.2 381 49-462 48-435 (437)
4 KOG1235 Predicted unusual prot 100.0 3E-66 6.5E-71 595.7 34.5 403 36-455 79-485 (538)
5 PRK11289 ampC beta-lactamase/D 100.0 6E-47 1.3E-51 431.9 30.4 240 475-758 28-268 (384)
6 PRK10662 beta-lactam binding p 100.0 2.5E-46 5.4E-51 427.2 31.5 248 473-760 26-277 (378)
7 PRK03642 putative periplasmic 100.0 7.4E-45 1.6E-49 422.2 32.5 333 476-933 37-397 (432)
8 KOG1236 Predicted unusual prot 100.0 4.7E-45 1E-49 393.0 26.0 373 51-453 121-558 (565)
9 PRK13128 D-aminopeptidase; Rev 100.0 5E-44 1.1E-48 418.8 31.2 237 479-754 6-245 (518)
10 PF00144 Beta-lactamase: Beta- 100.0 3.9E-43 8.3E-48 396.0 12.2 244 482-760 1-244 (329)
11 COG1680 AmpC Beta-lactamase cl 100.0 9.3E-37 2E-41 352.6 25.8 250 481-760 37-293 (390)
12 KOG1234 ABC (ATP binding casse 100.0 1.1E-36 2.3E-41 312.7 16.2 350 72-447 2-355 (363)
13 PF03109 ABC1: ABC1 family; I 99.9 2.4E-25 5.3E-30 211.6 5.1 117 108-237 1-119 (119)
14 cd05145 RIO1_like RIO kinase f 99.8 3.2E-19 7E-24 185.2 14.8 182 124-346 3-188 (190)
15 cd05147 RIO1_euk RIO kinase fa 99.8 1.1E-18 2.4E-23 180.9 13.8 182 124-345 3-187 (190)
16 smart00090 RIO RIO-like kinase 99.7 2.3E-16 5E-21 169.2 14.9 183 124-351 34-224 (237)
17 KOG0595 Serine/threonine-prote 99.7 1.8E-16 3.8E-21 172.7 9.9 145 123-321 15-168 (429)
18 cd05144 RIO2_C RIO kinase fami 99.6 1.6E-15 3.4E-20 158.6 14.9 170 123-334 20-195 (198)
19 KOG0593 Predicted protein kina 99.6 1.5E-15 3.2E-20 159.1 9.6 148 125-331 9-167 (396)
20 cd05119 RIO RIO kinase family, 99.6 5.1E-15 1.1E-19 152.9 13.6 165 124-327 3-173 (187)
21 KOG0605 NDR and related serine 99.6 2.3E-15 4.9E-20 169.0 11.6 150 120-326 142-299 (550)
22 PRK10359 lipopolysaccharide co 99.6 8.4E-15 1.8E-19 154.3 12.5 140 124-320 37-186 (232)
23 KOG0581 Mitogen-activated prot 99.5 8.1E-15 1.8E-19 158.6 7.4 139 124-321 85-232 (364)
24 PF01163 RIO1: RIO1 family; I 99.5 2.7E-14 5.8E-19 146.7 10.2 179 134-351 2-182 (188)
25 KOG4250 TANK binding protein k 99.5 1.4E-14 3E-19 167.3 8.1 151 118-322 13-178 (732)
26 KOG0600 Cdc2-related protein k 99.5 7.4E-15 1.6E-19 163.5 5.0 153 111-328 112-278 (560)
27 KOG1163 Casein kinase (serine/ 99.5 4.8E-14 1E-18 143.5 10.0 138 124-320 21-166 (341)
28 KOG0615 Serine/threonine prote 99.5 5.5E-14 1.2E-18 153.1 10.1 147 123-319 177-330 (475)
29 PRK09188 serine/threonine prot 99.5 1.2E-13 2.5E-18 156.2 12.6 139 123-320 23-164 (365)
30 PRK14879 serine/threonine prot 99.5 3.2E-13 6.8E-18 142.4 13.5 142 124-319 2-145 (211)
31 KOG0661 MAPK related serine/th 99.5 3.9E-14 8.6E-19 156.7 6.8 153 124-331 16-175 (538)
32 KOG0574 STE20-like serine/thre 99.5 1.4E-14 3.1E-19 150.8 2.9 159 101-322 18-183 (502)
33 KOG4236 Serine/threonine prote 99.4 1.1E-13 2.3E-18 153.6 7.8 160 113-326 559-726 (888)
34 KOG0667 Dual-specificity tyros 99.4 3.5E-13 7.6E-18 155.5 12.2 146 123-323 191-346 (586)
35 KOG0659 Cdk activating kinase 99.4 1.1E-13 2.4E-18 143.1 6.9 143 123-324 7-157 (318)
36 KOG0594 Protein kinase PCTAIRE 99.4 3.8E-13 8.3E-18 145.6 10.7 148 116-319 11-171 (323)
37 TIGR03724 arch_bud32 Kae1-asso 99.4 2.2E-12 4.8E-17 134.7 15.9 139 126-321 2-142 (199)
38 KOG0575 Polo-like serine/threo 99.4 8.9E-14 1.9E-18 158.7 5.6 138 124-321 24-171 (592)
39 KOG0192 Tyrosine kinase specif 99.4 6E-13 1.3E-17 150.4 11.3 141 125-320 48-196 (362)
40 cd05146 RIO3_euk RIO kinase fa 99.4 1.7E-12 3.8E-17 133.8 12.5 175 124-345 3-194 (197)
41 KOG0598 Ribosomal protein S6 k 99.4 7.2E-13 1.6E-17 143.6 9.8 143 119-318 25-175 (357)
42 PRK12274 serine/threonine prot 99.4 2.9E-12 6.2E-17 132.5 13.5 159 123-347 7-166 (218)
43 KOG0663 Protein kinase PITSLRE 99.4 5.1E-13 1.1E-17 142.0 8.1 143 124-321 82-230 (419)
44 KOG0592 3-phosphoinositide-dep 99.4 1.1E-12 2.4E-17 147.4 11.0 142 124-324 79-230 (604)
45 KOG0616 cAMP-dependent protein 99.4 2.9E-12 6.3E-17 134.5 12.4 145 119-321 44-197 (355)
46 KOG0583 Serine/threonine prote 99.4 2E-12 4.3E-17 147.4 12.1 147 123-319 22-172 (370)
47 KOG0608 Warts/lats-like serine 99.4 5.9E-13 1.3E-17 150.7 6.6 143 117-319 630-780 (1034)
48 KOG0578 p21-activated serine/t 99.4 4E-12 8.7E-17 144.2 13.1 176 85-322 239-423 (550)
49 KOG0577 Serine/threonine prote 99.4 6.5E-13 1.4E-17 149.4 6.5 177 111-344 21-208 (948)
50 cd05600 STKc_Sid2p_Dbf2p Catal 99.4 1.9E-12 4E-17 146.5 10.2 143 124-320 7-153 (333)
51 cd05085 PTKc_Fer Catalytic dom 99.4 4.4E-12 9.5E-17 136.8 12.4 141 124-319 1-144 (250)
52 cd05628 STKc_NDR1 Catalytic do 99.3 3.4E-12 7.5E-17 146.3 11.8 141 124-321 7-154 (363)
53 cd05571 STKc_PKB Catalytic dom 99.3 4E-12 8.6E-17 143.3 11.8 139 125-317 2-144 (323)
54 cd05626 STKc_LATS2 Catalytic d 99.3 3.2E-12 6.9E-17 147.6 10.5 139 124-319 7-152 (381)
55 cd05627 STKc_NDR2 Catalytic do 99.3 4.5E-12 9.9E-17 145.1 11.7 140 124-320 7-153 (360)
56 cd05593 STKc_PKB_gamma Catalyt 99.3 4.7E-12 1E-16 143.1 11.6 140 125-318 2-145 (328)
57 cd05614 STKc_MSK2_N N-terminal 99.3 4.1E-12 8.8E-17 143.7 10.7 77 239-318 77-155 (332)
58 cd05631 STKc_GRK4 Catalytic do 99.3 6.6E-12 1.4E-16 138.8 12.1 143 124-319 6-153 (285)
59 PLN00034 mitogen-activated pro 99.3 6.5E-12 1.4E-16 143.4 12.4 136 124-319 80-219 (353)
60 cd05084 PTKc_Fes Catalytic dom 99.3 8.4E-12 1.8E-16 134.8 12.6 141 124-319 1-145 (252)
61 cd05587 STKc_cPKC Catalytic do 99.3 5.2E-12 1.1E-16 142.4 11.2 138 124-317 6-150 (324)
62 KOG0193 Serine/threonine prote 99.3 3E-12 6.5E-17 145.7 9.1 149 114-318 387-538 (678)
63 KOG0597 Serine-threonine prote 99.3 2.3E-12 5.1E-17 144.7 8.0 139 124-320 8-152 (808)
64 cd05096 PTKc_DDR1 Catalytic do 99.3 9.1E-12 2E-16 138.8 12.7 141 124-319 11-189 (304)
65 cd05598 STKc_LATS Catalytic do 99.3 6.7E-12 1.5E-16 144.5 12.0 142 124-319 7-152 (376)
66 cd05151 ChoK Choline Kinase (C 99.3 1.8E-11 4E-16 124.1 13.8 129 123-319 3-138 (170)
67 KOG0658 Glycogen synthase kina 99.3 2.9E-12 6.3E-17 138.7 8.2 78 244-324 99-182 (364)
68 cd05595 STKc_PKB_beta Catalyti 99.3 5.2E-12 1.1E-16 142.4 10.8 140 125-318 2-145 (323)
69 PTZ00263 protein kinase A cata 99.3 4.3E-12 9.3E-17 143.4 10.1 144 123-320 23-170 (329)
70 cd05594 STKc_PKB_alpha Catalyt 99.3 8.2E-12 1.8E-16 140.8 12.3 137 125-318 2-146 (325)
71 cd05584 STKc_p70S6K Catalytic 99.3 5.9E-12 1.3E-16 141.9 11.1 142 124-318 2-150 (323)
72 cd05621 STKc_ROCK2 Catalytic d 99.3 6.8E-12 1.5E-16 144.2 11.6 142 124-320 49-194 (370)
73 cd05601 STKc_CRIK Catalytic do 99.3 7.9E-12 1.7E-16 141.2 11.7 141 124-320 7-154 (330)
74 cd05590 STKc_nPKC_eta Catalyti 99.3 8.9E-12 1.9E-16 140.3 11.9 77 239-318 68-146 (320)
75 cd05612 STKc_PRKX_like Catalyt 99.3 6E-12 1.3E-16 139.6 10.2 140 124-320 7-153 (291)
76 cd05102 PTKc_VEGFR3 Catalytic 99.3 6E-12 1.3E-16 142.6 10.3 49 269-319 175-225 (338)
77 cd05591 STKc_nPKC_epsilon Cata 99.3 1.1E-11 2.3E-16 139.7 12.2 77 239-318 68-146 (321)
78 cd05625 STKc_LATS1 Catalytic d 99.3 1E-11 2.2E-16 143.4 12.1 138 124-318 7-151 (382)
79 cd07869 STKc_PFTAIRE1 Catalyti 99.3 7E-12 1.5E-16 139.8 10.3 139 124-318 11-153 (303)
80 cd05624 STKc_MRCK_beta Catalyt 99.3 1.2E-11 2.5E-16 140.0 12.2 80 239-320 73-154 (331)
81 cd05615 STKc_cPKC_alpha Cataly 99.3 7.5E-12 1.6E-16 141.1 10.5 139 124-318 6-151 (323)
82 cd05585 STKc_YPK1_like Catalyt 99.3 1E-11 2.2E-16 139.2 11.6 138 126-318 1-143 (312)
83 cd05597 STKc_DMPK_like Catalyt 99.3 1E-11 2.2E-16 140.5 11.5 141 124-320 7-154 (331)
84 cd05620 STKc_nPKC_delta Cataly 99.3 7E-12 1.5E-16 140.9 10.1 76 239-317 68-145 (316)
85 cd07871 STKc_PCTAIRE3 Catalyti 99.3 8.6E-12 1.9E-16 138.1 10.7 139 124-318 11-153 (288)
86 cd05115 PTKc_Zap-70 Catalytic 99.3 1.5E-11 3.2E-16 133.7 12.3 139 126-319 3-146 (257)
87 cd05604 STKc_SGK3 Catalytic do 99.3 1.8E-11 4E-16 138.0 13.4 76 239-317 68-145 (325)
88 cd05573 STKc_ROCK_NDR_like Cat 99.3 7.4E-12 1.6E-16 142.4 10.1 140 124-320 7-153 (350)
89 cd05599 STKc_NDR_like Catalyti 99.3 9.3E-12 2E-16 142.6 11.0 140 124-320 7-153 (364)
90 KOG0660 Mitogen-activated prot 99.3 2.7E-12 5.8E-17 138.7 6.0 145 123-319 27-176 (359)
91 cd05592 STKc_nPKC_theta_delta 99.3 1.1E-11 2.4E-16 139.2 11.3 77 239-318 68-146 (316)
92 COG1718 RIO1 Serine/threonine 99.3 4E-11 8.7E-16 125.1 14.3 185 125-352 55-243 (268)
93 cd07878 STKc_p38beta_MAPK11 Ca 99.3 1.3E-11 2.9E-16 140.1 11.8 157 107-320 3-170 (343)
94 cd05629 STKc_NDR_like_fungal C 99.3 1.5E-11 3.2E-16 141.8 12.2 140 124-320 7-153 (377)
95 cd05602 STKc_SGK1 Catalytic do 99.3 2E-11 4.4E-16 137.6 13.0 77 239-318 68-146 (325)
96 cd05622 STKc_ROCK1 Catalytic d 99.3 1.5E-11 3.2E-16 141.5 12.1 142 124-320 49-194 (371)
97 cd05596 STKc_ROCK Catalytic do 99.3 1E-11 2.2E-16 142.9 10.7 141 124-319 49-193 (370)
98 cd05616 STKc_cPKC_beta Catalyt 99.3 1.3E-11 2.9E-16 139.0 11.4 139 124-318 6-151 (323)
99 cd05575 STKc_SGK Catalytic dom 99.3 2.3E-11 4.9E-16 137.1 13.1 77 239-318 68-146 (323)
100 KOG0591 NIMA (never in mitosis 99.3 2.1E-12 4.6E-17 134.4 4.3 143 124-322 25-182 (375)
101 cd05608 STKc_GRK1 Catalytic do 99.3 1.4E-11 3E-16 135.9 11.0 142 126-320 1-149 (280)
102 KOG1187 Serine/threonine prote 99.3 6.4E-12 1.4E-16 142.9 8.5 142 120-320 76-229 (361)
103 cd05603 STKc_SGK2 Catalytic do 99.3 2.2E-11 4.9E-16 137.0 12.9 76 239-317 68-145 (321)
104 cd05618 STKc_aPKC_iota Catalyt 99.3 1.9E-11 4.1E-16 138.2 11.9 76 239-317 68-145 (329)
105 COG0478 RIO-like serine/threon 99.3 4.7E-11 1E-15 125.6 13.6 180 124-349 97-276 (304)
106 cd05586 STKc_Sck1_like Catalyt 99.3 1.8E-11 3.8E-16 138.4 11.4 77 239-318 68-146 (330)
107 cd05617 STKc_aPKC_zeta Catalyt 99.3 2.5E-11 5.5E-16 137.0 12.5 137 125-317 2-145 (327)
108 cd05588 STKc_aPKC Catalytic do 99.3 2.1E-11 4.6E-16 137.8 11.7 139 125-317 2-145 (329)
109 cd05589 STKc_PKN Catalytic dom 99.3 1.9E-11 4.2E-16 137.7 11.2 143 124-318 5-151 (324)
110 cd06657 STKc_PAK4 Catalytic do 99.3 1.8E-11 3.8E-16 136.0 10.6 139 124-320 26-168 (292)
111 KOG0585 Ca2+/calmodulin-depend 99.2 1.3E-11 2.9E-16 136.7 9.1 153 124-320 103-262 (576)
112 cd07872 STKc_PCTAIRE2 Catalyti 99.2 2.1E-11 4.6E-16 136.3 10.8 140 123-318 11-154 (309)
113 KOG0198 MEKK and related serin 99.2 2E-11 4.3E-16 134.3 10.3 79 241-320 90-170 (313)
114 cd06649 PKc_MEK2 Catalytic dom 99.2 4.2E-11 9.2E-16 135.4 12.6 141 124-320 11-156 (331)
115 cd05069 PTKc_Yes Catalytic dom 99.2 3.4E-11 7.3E-16 130.9 11.3 139 124-319 12-153 (260)
116 KOG0032 Ca2+/calmodulin-depend 99.2 3.4E-11 7.3E-16 137.4 11.6 145 124-320 41-191 (382)
117 cd05605 STKc_GRK4_like Catalyt 99.2 2.9E-11 6.4E-16 133.6 10.9 143 124-319 6-153 (285)
118 cd05070 PTKc_Fyn_Yrk Catalytic 99.2 3.4E-11 7.4E-16 130.8 11.2 140 124-320 12-154 (260)
119 cd05623 STKc_MRCK_alpha Cataly 99.2 3.7E-11 7.9E-16 136.0 11.8 79 239-319 73-153 (332)
120 cd05068 PTKc_Frk_like Catalyti 99.2 2.8E-11 6.2E-16 131.5 10.4 139 124-319 12-154 (261)
121 PRK13184 pknD serine/threonine 99.2 4.5E-11 9.7E-16 147.6 13.2 142 124-318 8-163 (932)
122 cd05081 PTKc_Jak2_Jak3_rpt2 Ca 99.2 4.3E-11 9.3E-16 131.8 11.8 141 124-320 10-160 (284)
123 cd05607 STKc_GRK7 Catalytic do 99.2 4.4E-11 9.5E-16 131.6 11.8 80 239-320 65-147 (277)
124 KOG1165 Casein kinase (serine/ 99.2 2.1E-11 4.6E-16 129.6 8.7 138 124-320 34-181 (449)
125 cd05632 STKc_GRK5 Catalytic do 99.2 3.7E-11 8E-16 132.8 11.2 143 124-319 6-153 (285)
126 PTZ00426 cAMP-dependent protei 99.2 3.5E-11 7.6E-16 136.7 11.2 143 124-320 36-183 (340)
127 cd05104 PTKc_Kit Catalytic dom 99.2 4.9E-11 1.1E-15 137.4 12.4 50 269-320 215-266 (375)
128 cd05582 STKc_RSK_N N-terminal 99.2 4.1E-11 8.9E-16 134.7 11.0 141 124-319 2-149 (318)
129 PRK09605 bifunctional UGMP fam 99.2 1.2E-10 2.6E-15 140.3 15.6 141 122-320 337-479 (535)
130 KOG0582 Ste20-like serine/thre 99.2 4.3E-11 9.3E-16 132.0 10.6 141 124-320 32-178 (516)
131 cd05071 PTKc_Src Catalytic dom 99.2 4.6E-11 9.9E-16 130.2 11.0 140 124-320 12-154 (262)
132 cd05114 PTKc_Tec_Rlk Catalytic 99.2 5.2E-11 1.1E-15 129.1 11.2 139 124-319 10-151 (256)
133 PTZ00267 NIMA-related protein 99.2 4.5E-11 9.8E-16 142.1 11.6 139 123-320 72-221 (478)
134 cd05067 PTKc_Lck_Blk Catalytic 99.2 5.1E-11 1.1E-15 129.5 11.0 139 124-319 12-153 (260)
135 PF00069 Pkinase: Protein kina 99.2 4.5E-11 9.7E-16 129.4 10.5 140 124-318 5-148 (260)
136 cd06635 STKc_TAO1 Catalytic do 99.2 9.4E-11 2E-15 131.7 13.4 160 105-320 14-177 (317)
137 cd05108 PTKc_EGFR Catalytic do 99.2 6.7E-11 1.4E-15 132.8 12.0 80 239-320 80-161 (316)
138 cd06629 STKc_MAPKKK_Bck1_like 99.2 1E-10 2.2E-15 127.8 13.2 152 118-319 1-159 (272)
139 cd07848 STKc_CDKL5 Catalytic d 99.2 3.8E-11 8.3E-16 132.4 9.8 142 124-320 7-152 (287)
140 cd05059 PTKc_Tec_like Catalyti 99.2 5.4E-11 1.2E-15 129.0 10.7 136 124-319 10-151 (256)
141 cd05064 PTKc_EphR_A10 Catalyti 99.2 6.7E-11 1.5E-15 129.2 11.4 140 124-318 11-157 (266)
142 cd06644 STKc_STK10_LOK Catalyt 99.2 8.5E-11 1.8E-15 130.2 12.3 146 115-318 11-160 (292)
143 KOG0201 Serine/threonine prote 99.2 7.3E-12 1.6E-16 138.0 3.7 154 113-324 10-167 (467)
144 KOG1989 ARK protein kinase fam 99.2 4.6E-11 1E-15 142.3 10.7 124 243-368 118-253 (738)
145 cd07874 STKc_JNK3 Catalytic do 99.2 8.5E-11 1.8E-15 134.2 12.6 73 241-319 96-170 (355)
146 cd05079 PTKc_Jak1_rpt2 Catalyt 99.2 8.8E-11 1.9E-15 129.5 12.2 141 124-319 10-160 (284)
147 cd05033 PTKc_EphR Catalytic do 99.2 1.1E-10 2.3E-15 127.4 12.6 142 123-319 9-157 (266)
148 cd05112 PTKc_Itk Catalytic dom 99.2 6.8E-11 1.5E-15 128.0 10.9 136 124-319 10-151 (256)
149 cd00192 PTKc Catalytic domain 99.2 9.4E-11 2E-15 126.6 11.9 140 124-321 1-158 (262)
150 cd05040 PTKc_Ack_like Catalyti 99.2 7E-11 1.5E-15 127.9 10.9 142 124-320 1-149 (257)
151 cd06650 PKc_MEK1 Catalytic dom 99.2 1.1E-10 2.4E-15 132.2 12.9 140 124-319 11-155 (333)
152 cd05619 STKc_nPKC_theta Cataly 99.2 9.8E-11 2.1E-15 131.6 12.3 76 239-317 68-145 (316)
153 cd05113 PTKc_Btk_Bmx Catalytic 99.2 7.1E-11 1.5E-15 128.3 10.8 136 124-319 10-151 (256)
154 cd07876 STKc_JNK2 Catalytic do 99.2 1.1E-10 2.5E-15 133.5 13.0 137 124-318 27-173 (359)
155 cd05122 PKc_STE Catalytic doma 99.2 9.5E-11 2.1E-15 125.6 11.5 139 124-321 6-151 (253)
156 cd05633 STKc_GRK3 Catalytic do 99.2 1.6E-10 3.4E-15 127.4 13.5 78 239-319 69-148 (279)
157 cd06646 STKc_MAP4K5 Catalytic 99.2 9.5E-11 2E-15 127.8 11.5 139 124-319 15-157 (267)
158 KOG0588 Serine/threonine prote 99.2 4.3E-11 9.3E-16 137.5 9.0 134 124-317 18-161 (786)
159 cd05041 PTKc_Fes_like Catalyti 99.2 1.4E-10 3E-15 125.1 12.6 140 124-319 1-144 (251)
160 cd05109 PTKc_HER2 Catalytic do 99.2 1.3E-10 2.9E-15 127.6 12.7 80 239-320 80-161 (279)
161 cd06641 STKc_MST3 Catalytic do 99.2 1.4E-10 3E-15 127.4 12.8 148 114-320 2-153 (277)
162 cd05610 STKc_MASTL Catalytic d 99.2 8.7E-11 1.9E-15 145.0 12.2 142 124-319 10-155 (669)
163 KOG0197 Tyrosine kinases [Sign 99.2 5E-11 1.1E-15 135.1 9.1 138 124-321 212-356 (468)
164 KOG0694 Serine/threonine prote 99.2 5.2E-11 1.1E-15 137.9 9.3 138 124-318 374-518 (694)
165 cd06642 STKc_STK25-YSK1 Cataly 99.2 6.5E-11 1.4E-15 130.0 9.9 144 115-320 3-153 (277)
166 cd06611 STKc_SLK_like Catalyti 99.2 1.2E-10 2.6E-15 128.0 11.9 140 124-319 11-154 (280)
167 cd06640 STKc_MST4 Catalytic do 99.2 1.5E-10 3.2E-15 127.2 12.5 147 115-320 3-153 (277)
168 cd05570 STKc_PKC Catalytic dom 99.2 7.8E-11 1.7E-15 132.5 10.4 76 239-317 68-145 (318)
169 cd07862 STKc_CDK6 Catalytic do 99.2 7.3E-11 1.6E-15 130.4 10.0 77 240-319 82-161 (290)
170 KOG0662 Cyclin-dependent kinas 99.2 3.9E-11 8.4E-16 117.2 6.7 138 124-322 8-155 (292)
171 cd07859 STKc_TDY_MAPK_plant Ca 99.2 8.7E-11 1.9E-15 132.8 10.8 139 124-318 6-153 (338)
172 smart00219 TyrKc Tyrosine kina 99.2 1.1E-10 2.4E-15 126.0 11.2 140 124-321 5-156 (258)
173 cd05083 PTKc_Chk Catalytic dom 99.2 9.6E-11 2.1E-15 126.8 10.7 136 124-318 12-150 (254)
174 cd05034 PTKc_Src_like Catalyti 99.2 1.1E-10 2.4E-15 126.7 11.2 137 124-320 12-155 (261)
175 PHA03212 serine/threonine kina 99.2 1.4E-10 3.1E-15 134.3 12.6 131 124-318 98-232 (391)
176 cd05609 STKc_MAST Catalytic do 99.2 1.5E-10 3.3E-15 129.1 12.3 137 124-317 7-150 (305)
177 cd05063 PTKc_EphR_A2 Catalytic 99.2 1.6E-10 3.5E-15 126.1 12.1 143 123-320 10-159 (268)
178 cd07880 STKc_p38gamma_MAPK12 C 99.2 1.3E-10 2.8E-15 132.2 11.7 157 106-319 2-169 (343)
179 cd07873 STKc_PCTAIRE1 Catalyti 99.2 9.8E-11 2.1E-15 130.4 10.3 139 124-318 12-154 (301)
180 cd06631 STKc_YSK4 Catalytic do 99.2 1.8E-10 3.8E-15 125.5 12.1 144 124-318 6-152 (265)
181 PRK01723 3-deoxy-D-manno-octul 99.2 4.2E-10 9.1E-15 121.1 14.7 146 124-319 37-193 (239)
182 cd05037 PTK_Jak_rpt1 Pseudokin 99.2 1.2E-10 2.6E-15 126.1 10.6 81 240-320 73-160 (259)
183 PHA03211 serine/threonine kina 99.2 1E-10 2.2E-15 137.7 10.8 134 123-319 174-311 (461)
184 KOG0610 Putative serine/threon 99.2 1.3E-10 2.7E-15 127.5 10.6 139 124-318 83-229 (459)
185 cd05103 PTKc_VEGFR2 Catalytic 99.2 1.5E-10 3.3E-15 131.6 11.9 39 279-319 192-230 (343)
186 cd05072 PTKc_Lyn Catalytic dom 99.2 2E-10 4.4E-15 124.7 12.4 139 124-320 12-155 (261)
187 cd05082 PTKc_Csk Catalytic dom 99.2 1.6E-10 3.6E-15 125.1 11.6 137 124-319 12-153 (256)
188 PHA03209 serine/threonine kina 99.2 1.1E-10 2.4E-15 133.6 10.7 131 124-317 72-206 (357)
189 KOG0611 Predicted serine/threo 99.2 6.8E-11 1.5E-15 128.1 8.3 141 124-319 59-204 (668)
190 cd05066 PTKc_EphR_A Catalytic 99.1 1.7E-10 3.8E-15 125.9 11.8 142 124-320 10-158 (267)
191 cd05630 STKc_GRK6 Catalytic do 99.1 1.7E-10 3.8E-15 127.5 11.8 143 124-319 6-153 (285)
192 cd06625 STKc_MEKK3_like Cataly 99.1 2.2E-10 4.7E-15 124.5 12.3 144 123-319 7-155 (263)
193 KOG0587 Traf2- and Nck-interac 99.1 1.2E-10 2.5E-15 137.8 10.7 152 112-324 15-179 (953)
194 cd05105 PTKc_PDGFR_alpha Catal 99.1 2.3E-10 5.1E-15 132.8 13.0 39 279-319 250-288 (400)
195 cd06645 STKc_MAP4K3 Catalytic 99.1 1.5E-10 3.3E-15 126.1 10.7 139 124-319 15-157 (267)
196 cd05087 PTKc_Aatyk1_Aatyk3 Cat 99.1 1.9E-10 4.2E-15 125.7 11.5 136 125-318 2-150 (269)
197 cd06643 STKc_SLK Catalytic dom 99.1 2.5E-10 5.4E-15 125.7 12.4 140 124-319 11-154 (282)
198 PTZ00283 serine/threonine prot 99.1 1.7E-10 3.6E-15 137.7 11.7 76 242-319 114-194 (496)
199 cd05097 PTKc_DDR_like Catalyti 99.1 2E-10 4.2E-15 127.6 11.4 79 239-319 89-180 (295)
200 cd05073 PTKc_Hck Catalytic dom 99.1 2.3E-10 5.1E-15 124.3 11.7 140 124-320 12-154 (260)
201 cd05057 PTKc_EGFR_like Catalyt 99.1 3E-10 6.5E-15 124.9 12.6 141 124-319 13-160 (279)
202 cd05581 STKc_PDK1 Catalytic do 99.1 1.4E-10 3E-15 127.0 9.9 80 239-321 74-155 (280)
203 cd06656 STKc_PAK3 Catalytic do 99.1 1.8E-10 3.8E-15 128.2 10.9 139 124-320 25-167 (297)
204 cd05061 PTKc_InsR Catalytic do 99.1 2.3E-10 4.9E-15 126.6 11.7 138 124-319 12-170 (288)
205 cd07863 STKc_CDK4 Catalytic do 99.1 1.7E-10 3.6E-15 127.3 10.6 75 242-319 82-159 (288)
206 cd00180 PKc Catalytic domain o 99.1 3E-10 6.5E-15 117.4 11.8 139 126-321 1-146 (215)
207 KOG0580 Serine/threonine prote 99.1 2E-11 4.3E-16 124.9 2.8 156 120-330 23-186 (281)
208 cd05076 PTK_Tyk2_rpt1 Pseudoki 99.1 1.5E-10 3.3E-15 127.2 10.2 80 239-318 88-174 (274)
209 cd07875 STKc_JNK1 Catalytic do 99.1 2.7E-10 5.9E-15 130.6 12.6 73 241-319 103-177 (364)
210 cd06917 STKc_NAK1_like Catalyt 99.1 3.3E-10 7.2E-15 124.2 12.8 143 124-321 7-154 (277)
211 cd05116 PTKc_Syk Catalytic dom 99.1 2.7E-10 5.9E-15 123.6 11.9 79 239-320 67-147 (257)
212 cd05080 PTKc_Tyk2_rpt2 Catalyt 99.1 3.7E-10 8.1E-15 124.4 13.2 139 124-320 10-159 (283)
213 cd05580 STKc_PKA Catalytic dom 99.1 2.7E-10 5.8E-15 126.1 12.1 144 124-321 7-154 (290)
214 cd05606 STKc_beta_ARK Catalyti 99.1 3.6E-10 7.8E-15 124.4 13.0 79 239-320 69-149 (278)
215 cd08529 STKc_FA2-like Catalyti 99.1 2.7E-10 5.8E-15 123.1 11.8 143 124-320 6-153 (256)
216 PTZ00036 glycogen synthase kin 99.1 2.2E-10 4.8E-15 134.8 11.9 75 243-319 143-222 (440)
217 cd06624 STKc_ASK Catalytic dom 99.1 2.6E-10 5.7E-15 124.4 11.7 141 124-319 14-160 (268)
218 cd05090 PTKc_Ror1 Catalytic do 99.1 3.1E-10 6.8E-15 125.0 12.4 141 124-319 11-175 (283)
219 cd05106 PTKc_CSF-1R Catalytic 99.1 2.7E-10 5.9E-15 131.2 12.1 50 268-319 212-263 (374)
220 PRK10345 hypothetical protein; 99.1 4.1E-10 8.9E-15 118.3 12.3 140 123-318 7-159 (210)
221 cd07868 STKc_CDK8 Catalytic do 99.1 2.4E-10 5.1E-15 128.2 11.2 140 122-319 5-163 (317)
222 cd05613 STKc_MSK1_N N-terminal 99.1 2.3E-10 4.9E-15 126.6 10.8 78 240-320 78-157 (290)
223 cd05056 PTKc_FAK Catalytic dom 99.1 2.6E-10 5.6E-15 124.7 11.1 142 124-320 12-159 (270)
224 cd05049 PTKc_Trk Catalytic dom 99.1 3.1E-10 6.8E-15 124.5 11.8 140 124-318 11-172 (280)
225 KOG0612 Rho-associated, coiled 99.1 4.5E-11 9.7E-16 144.3 5.3 76 240-319 148-226 (1317)
226 cd06613 STKc_MAP4K3_like Catal 99.1 3.4E-10 7.5E-15 122.7 11.8 141 124-320 9-153 (262)
227 cd07853 STKc_NLK Catalytic dom 99.1 1.6E-10 3.4E-15 133.0 9.5 75 241-319 78-154 (372)
228 cd07847 STKc_CDKL1_4 Catalytic 99.1 2E-10 4.4E-15 126.3 10.1 142 124-320 7-152 (286)
229 cd07844 STKc_PCTAIRE_like Cata 99.1 2.2E-10 4.9E-15 126.6 10.5 139 124-318 11-153 (291)
230 cd05039 PTKc_Csk_like Catalyti 99.1 3.7E-10 8E-15 122.3 11.9 139 124-320 12-154 (256)
231 cd05077 PTK_Jak1_rpt1 Pseudoki 99.1 3.2E-10 6.8E-15 123.7 11.4 80 239-318 76-162 (262)
232 cd06658 STKc_PAK5 Catalytic do 99.1 1.5E-10 3.3E-15 128.4 8.9 77 239-319 91-169 (292)
233 cd06654 STKc_PAK1 Catalytic do 99.1 2.4E-10 5.3E-15 127.0 10.6 139 124-320 26-168 (296)
234 cd08224 STKc_Nek6_Nek7 Catalyt 99.1 2.6E-10 5.7E-15 124.0 10.5 144 124-320 8-158 (267)
235 cd06605 PKc_MAPKK Catalytic do 99.1 2.6E-10 5.7E-15 123.9 10.5 143 124-321 7-154 (265)
236 cd05577 STKc_GRK Catalytic dom 99.1 2.7E-10 5.9E-15 125.1 10.7 141 126-319 1-146 (277)
237 COG3642 Mn2+-dependent serine/ 99.1 1.8E-09 4E-14 107.8 15.3 138 124-318 2-141 (204)
238 cd06627 STKc_Cdc7_like Catalyt 99.1 4E-10 8.8E-15 121.3 11.7 144 124-322 6-153 (254)
239 cd05075 PTKc_Axl Catalytic dom 99.1 4.4E-10 9.5E-15 122.8 12.1 78 241-320 80-164 (272)
240 cd06659 STKc_PAK6 Catalytic do 99.1 3.2E-10 7E-15 126.2 11.2 78 239-320 90-169 (297)
241 cd06632 STKc_MEKK1_plant Catal 99.1 3.6E-10 7.9E-15 122.1 11.2 146 123-320 5-154 (258)
242 cd05038 PTKc_Jak_rpt2 Catalyti 99.1 3.5E-10 7.7E-15 124.1 11.3 138 124-319 10-160 (284)
243 cd05054 PTKc_VEGFR Catalytic d 99.1 3.7E-10 7.9E-15 128.2 11.6 52 266-319 171-224 (337)
244 PF06176 WaaY: Lipopolysacchar 99.1 1E-09 2.3E-14 113.7 13.7 70 239-318 115-184 (229)
245 cd05065 PTKc_EphR_B Catalytic 99.1 4.3E-10 9.3E-15 122.8 11.7 141 124-319 10-157 (269)
246 cd05101 PTKc_FGFR2 Catalytic d 99.1 5.2E-10 1.1E-14 124.7 12.5 80 239-320 93-189 (304)
247 cd05579 STKc_MAST_like Catalyt 99.1 3.7E-10 8E-15 122.3 10.9 76 240-318 66-143 (265)
248 PLN03225 Serine/threonine-prot 99.1 4E-10 8.8E-15 135.9 12.3 78 240-318 208-306 (566)
249 cd05052 PTKc_Abl Catalytic dom 99.1 4.1E-10 8.9E-15 122.6 11.3 140 124-320 12-156 (263)
250 cd05088 PTKc_Tie2 Catalytic do 99.1 5.4E-10 1.2E-14 124.7 12.5 77 239-317 80-173 (303)
251 cd05611 STKc_Rim15_like Cataly 99.1 4.6E-10 1E-14 121.8 11.7 77 239-318 69-147 (260)
252 PHA02988 hypothetical protein; 99.1 3.8E-10 8.3E-15 124.7 11.1 140 123-320 25-175 (283)
253 cd06612 STKc_MST1_2 Catalytic 99.1 5.1E-10 1.1E-14 120.9 11.8 140 124-321 9-152 (256)
254 cd06619 PKc_MKK5 Catalytic dom 99.1 6.4E-10 1.4E-14 122.4 12.7 137 124-320 7-147 (279)
255 cd06638 STKc_myosinIIIA Cataly 99.1 5E-10 1.1E-14 123.4 11.9 141 124-320 24-176 (286)
256 cd06637 STKc_TNIK Catalytic do 99.1 4.2E-10 9.2E-15 122.9 11.1 149 114-320 4-163 (272)
257 cd08219 STKc_Nek3 Catalytic do 99.1 6.9E-10 1.5E-14 120.1 12.6 142 124-320 6-152 (255)
258 cd05062 PTKc_IGF-1R Catalytic 99.1 5.9E-10 1.3E-14 122.4 12.3 79 239-319 81-170 (277)
259 KOG1167 Serine/threonine prote 99.1 1.6E-10 3.4E-15 127.2 7.5 134 124-317 42-182 (418)
260 cd07832 STKc_CCRK Catalytic do 99.1 4E-10 8.6E-15 124.0 10.9 141 124-320 6-151 (286)
261 cd05035 PTKc_Axl_like Catalyti 99.1 5.8E-10 1.3E-14 121.7 12.0 76 242-319 82-164 (273)
262 cd05148 PTKc_Srm_Brk Catalytic 99.1 2.9E-10 6.4E-15 123.4 9.6 141 124-320 12-156 (261)
263 cd05048 PTKc_Ror Catalytic Dom 99.1 6.2E-10 1.3E-14 122.5 12.2 141 124-319 11-175 (283)
264 cd07839 STKc_CDK5 Catalytic do 99.1 2.8E-10 6.1E-15 125.2 9.6 141 124-319 6-150 (284)
265 cd07867 STKc_CDC2L6 Catalytic 99.1 4.6E-10 9.9E-15 125.7 11.4 142 121-319 4-163 (317)
266 cd07870 STKc_PFTAIRE2 Catalyti 99.1 4.8E-10 1E-14 124.0 11.4 140 123-318 10-153 (291)
267 cd06628 STKc_MAPKKK_Byr2_like 99.1 7.3E-10 1.6E-14 120.7 12.6 148 124-319 6-157 (267)
268 cd07845 STKc_CDK10 Catalytic d 99.1 4E-10 8.6E-15 126.0 10.6 142 124-320 13-160 (309)
269 cd08228 STKc_Nek6 Catalytic do 99.1 3.9E-10 8.5E-15 122.8 10.3 144 124-320 8-158 (267)
270 cd06655 STKc_PAK2 Catalytic do 99.1 4.6E-10 9.9E-15 124.9 11.0 140 124-321 25-168 (296)
271 cd08223 STKc_Nek4 Catalytic do 99.1 5.8E-10 1.3E-14 120.6 11.6 142 124-319 6-153 (257)
272 cd06615 PKc_MEK Catalytic doma 99.1 6.8E-10 1.5E-14 124.2 12.4 140 124-319 7-151 (308)
273 cd07861 STKc_CDK1_euk Catalyti 99.1 3.8E-10 8.2E-15 124.2 10.1 141 124-319 6-152 (285)
274 cd05036 PTKc_ALK_LTK Catalytic 99.1 5.1E-10 1.1E-14 123.0 11.1 143 124-319 12-170 (277)
275 KOG0196 Tyrosine kinase, EPH ( 99.1 7E-11 1.5E-15 137.6 4.4 176 90-322 603-785 (996)
276 cd07837 STKc_CdkB_plant Cataly 99.1 6.4E-10 1.4E-14 123.1 12.0 143 124-319 7-162 (295)
277 KOG1164 Casein kinase (serine/ 99.1 5.1E-10 1.1E-14 126.2 11.3 140 123-316 23-175 (322)
278 cd07879 STKc_p38delta_MAPK13 C 99.1 6.8E-10 1.5E-14 126.2 12.4 153 108-319 4-168 (342)
279 PTZ00284 protein kinase; Provi 99.1 2.2E-10 4.7E-15 136.0 8.7 143 124-317 135-297 (467)
280 cd05583 STKc_MSK_N N-terminal 99.1 4.6E-10 9.9E-15 124.0 10.7 78 240-320 78-157 (288)
281 cd05098 PTKc_FGFR1 Catalytic d 99.1 7.4E-10 1.6E-14 123.7 12.5 143 123-319 23-191 (307)
282 cd05120 APH_ChoK_like Aminogly 99.1 1.1E-09 2.4E-14 107.5 12.4 131 124-320 4-141 (155)
283 cd05042 PTKc_Aatyk Catalytic d 99.1 4.5E-10 9.7E-15 122.7 10.5 78 239-318 67-150 (269)
284 cd05060 PTKc_Syk_like Catalyti 99.1 8.9E-10 1.9E-14 119.5 12.6 139 125-319 2-146 (257)
285 cd07841 STKc_CDK7 Catalytic do 99.1 3.7E-10 8E-15 125.3 9.8 145 124-320 6-154 (298)
286 cd05111 PTK_HER3 Pseudokinase 99.1 7.4E-10 1.6E-14 122.0 12.1 80 239-320 80-161 (279)
287 cd05578 STKc_Yank1 Catalytic d 99.1 4.6E-10 1E-14 121.7 10.2 141 124-321 6-153 (258)
288 cd06639 STKc_myosinIIIB Cataly 99.1 9.2E-10 2E-14 121.8 12.8 141 124-320 28-180 (291)
289 cd05110 PTKc_HER4 Catalytic do 99.1 6.9E-10 1.5E-14 123.8 11.7 80 239-320 80-161 (303)
290 cd08229 STKc_Nek7 Catalytic do 99.1 4.4E-10 9.5E-15 122.4 9.9 143 124-319 8-157 (267)
291 cd06617 PKc_MKK3_6 Catalytic d 99.1 5.9E-10 1.3E-14 122.5 10.8 142 124-320 7-156 (283)
292 cd06622 PKc_MAPKK_PBS2_like Ca 99.1 5.7E-10 1.2E-14 123.0 10.6 78 240-319 72-154 (286)
293 cd06630 STKc_MEKK1 Catalytic d 99.1 6.9E-10 1.5E-14 120.9 11.1 147 124-320 6-156 (268)
294 cd07836 STKc_Pho85 Catalytic d 99.1 8.5E-10 1.8E-14 121.3 11.9 137 124-319 6-151 (284)
295 cd06610 STKc_OSR1_SPAK Catalyt 99.0 8.6E-10 1.9E-14 119.8 11.6 142 124-320 7-154 (267)
296 cd05095 PTKc_DDR2 Catalytic do 99.0 8.9E-10 1.9E-14 122.3 11.9 79 239-319 91-181 (296)
297 cd06623 PKc_MAPKK_plant_like C 99.0 1.1E-09 2.4E-14 118.7 12.3 141 124-320 7-152 (264)
298 cd05091 PTKc_Ror2 Catalytic do 99.0 8.5E-10 1.8E-14 121.4 11.5 80 239-320 80-176 (283)
299 cd06614 STKc_PAK Catalytic dom 99.0 1E-09 2.2E-14 121.1 12.0 148 114-320 17-168 (286)
300 cd05574 STKc_phototropin_like 99.0 7.4E-10 1.6E-14 124.1 11.1 141 124-320 7-155 (316)
301 cd06633 STKc_TAO3 Catalytic do 99.0 8.8E-10 1.9E-14 123.6 11.7 153 110-318 15-171 (313)
302 KOG1166 Mitotic checkpoint ser 99.0 5.6E-10 1.2E-14 137.2 10.8 141 124-318 704-851 (974)
303 cd07850 STKc_JNK Catalytic dom 99.0 7.1E-10 1.5E-14 126.6 11.0 74 241-320 95-170 (353)
304 cd06607 STKc_TAO Catalytic dom 99.0 8.5E-10 1.8E-14 123.3 11.4 151 113-319 12-166 (307)
305 PHA03207 serine/threonine kina 99.0 5.4E-10 1.2E-14 129.5 10.1 134 124-320 98-237 (392)
306 PLN03224 probable serine/threo 99.0 1.2E-09 2.7E-14 128.9 13.1 77 240-318 258-359 (507)
307 cd06626 STKc_MEKK4 Catalytic d 99.0 7.9E-10 1.7E-14 120.0 10.7 139 124-320 6-151 (264)
308 cd06636 STKc_MAP4K4_6 Catalyti 99.0 1E-09 2.3E-14 120.6 11.7 77 241-319 93-172 (282)
309 cd05572 STKc_cGK_PKG Catalytic 99.0 1.4E-09 3.1E-14 118.1 12.6 142 126-321 1-146 (262)
310 cd06608 STKc_myosinIII_like Ca 99.0 1.2E-09 2.6E-14 119.1 12.0 141 124-320 12-165 (275)
311 cd06652 STKc_MEKK2 Catalytic d 99.0 1E-09 2.2E-14 119.5 11.4 144 124-319 8-157 (265)
312 cd05107 PTKc_PDGFR_beta Cataly 99.0 1.3E-09 2.9E-14 126.4 12.9 38 279-318 252-289 (401)
313 cd05055 PTKc_PDGFR Catalytic d 99.0 1.2E-09 2.5E-14 122.0 12.0 143 123-319 40-192 (302)
314 cd06648 STKc_PAK_II Catalytic 99.0 1.3E-09 2.7E-14 120.6 12.0 138 124-319 25-166 (285)
315 cd05051 PTKc_DDR Catalytic dom 99.0 1.7E-09 3.7E-14 119.8 13.1 79 239-319 91-181 (296)
316 cd05089 PTKc_Tie1 Catalytic do 99.0 1.2E-09 2.6E-14 121.4 11.9 140 124-317 8-168 (297)
317 cd08221 STKc_Nek9 Catalytic do 99.0 1.1E-09 2.3E-14 118.5 11.2 142 124-320 6-153 (256)
318 cd07833 STKc_CDKL Catalytic do 99.0 7.4E-10 1.6E-14 122.0 10.0 143 124-321 7-153 (288)
319 cd07843 STKc_CDC2L1 Catalytic 99.0 9.9E-10 2.2E-14 121.6 11.0 142 124-320 11-158 (293)
320 cd05047 PTKc_Tie Catalytic dom 99.0 2.3E-09 4.9E-14 117.4 13.6 138 125-317 2-161 (270)
321 cd05093 PTKc_TrkB Catalytic do 99.0 1.4E-09 3E-14 120.3 11.9 79 239-319 79-171 (288)
322 cd06609 STKc_MST3_like Catalyt 99.0 1.2E-09 2.7E-14 119.6 11.4 141 124-321 7-151 (274)
323 cd06653 STKc_MEKK3_like_1 Cata 99.0 1.2E-09 2.5E-14 119.2 11.0 144 124-319 8-157 (264)
324 cd07877 STKc_p38alpha_MAPK14 C 99.0 9.5E-10 2.1E-14 125.2 10.8 139 124-319 23-171 (345)
325 cd07840 STKc_CDK9_like Catalyt 99.0 8.5E-10 1.8E-14 121.2 9.9 143 124-321 5-153 (287)
326 PF07714 Pkinase_Tyr: Protein 99.0 7.2E-10 1.6E-14 120.8 9.2 140 124-318 5-153 (259)
327 cd07864 STKc_CDK12 Catalytic d 99.0 7.7E-10 1.7E-14 122.9 9.5 142 124-320 13-168 (302)
328 cd05086 PTKc_Aatyk2 Catalytic 99.0 9.3E-10 2E-14 120.3 10.0 76 240-317 68-148 (268)
329 cd07846 STKc_CDKL2_3 Catalytic 99.0 8E-10 1.7E-14 121.7 9.5 78 240-320 73-152 (286)
330 cd05050 PTKc_Musk Catalytic do 99.0 1.5E-09 3.2E-14 120.0 11.6 140 124-318 11-180 (288)
331 cd06606 STKc_MAPKKK Catalytic 99.0 1.4E-09 3.1E-14 116.9 11.3 143 124-321 6-154 (260)
332 cd05094 PTKc_TrkC Catalytic do 99.0 1.5E-09 3.2E-14 120.2 11.5 79 239-319 79-174 (291)
333 cd08217 STKc_Nek2 Catalytic do 99.0 1.4E-09 2.9E-14 117.9 10.9 77 242-320 76-162 (265)
334 cd05058 PTKc_Met_Ron Catalytic 99.0 1.7E-09 3.7E-14 117.4 11.6 79 240-320 70-150 (262)
335 smart00221 STYKc Protein kinas 99.0 1.4E-09 3E-14 114.6 10.6 140 124-321 5-151 (225)
336 cd05099 PTKc_FGFR4 Catalytic d 99.0 2.3E-09 5E-14 120.2 12.9 80 239-320 90-186 (314)
337 cd05053 PTKc_FGFR Catalytic do 99.0 2E-09 4.3E-14 119.1 12.2 143 124-320 18-184 (293)
338 cd08215 STKc_Nek Catalytic dom 99.0 1.5E-09 3.3E-14 116.9 11.0 143 124-320 6-155 (258)
339 cd05032 PTKc_InsR_like Catalyt 99.0 1.3E-09 2.9E-14 119.4 10.6 141 124-319 12-170 (277)
340 KOG1095 Protein tyrosine kinas 99.0 6.6E-10 1.4E-14 136.7 8.8 140 124-318 698-852 (1025)
341 cd05078 PTK_Jak2_Jak3_rpt1 Pse 99.0 5.6E-10 1.2E-14 121.3 7.4 81 239-319 71-159 (258)
342 cd06620 PKc_MAPKK_Byr1_like Ca 99.0 1.9E-09 4E-14 119.0 11.7 137 124-319 11-155 (284)
343 KOG0983 Mitogen-activated prot 99.0 4.6E-10 9.9E-15 116.7 6.2 79 239-321 163-245 (391)
344 cd06647 STKc_PAK_I Catalytic d 99.0 1.4E-09 3E-14 120.8 10.6 78 239-320 88-167 (293)
345 cd06634 STKc_TAO2 Catalytic do 99.0 2.1E-09 4.7E-14 120.2 12.1 154 111-320 10-167 (308)
346 cd07865 STKc_CDK9 Catalytic do 99.0 1.4E-09 3E-14 121.1 10.5 77 241-320 93-171 (310)
347 PTZ00024 cyclin-dependent prot 99.0 1.4E-09 3.1E-14 123.0 10.7 152 124-319 15-170 (335)
348 cd07860 STKc_CDK2_3 Catalytic 99.0 8.9E-10 1.9E-14 121.2 8.7 141 124-319 6-151 (284)
349 cd05045 PTKc_RET Catalytic dom 99.0 2.3E-09 4.9E-14 118.7 11.9 79 239-319 75-178 (290)
350 cd06651 STKc_MEKK3 Catalytic d 99.0 2.2E-09 4.8E-14 117.1 11.6 145 123-319 7-157 (266)
351 KOG1094 Discoidin domain recep 99.0 7.1E-10 1.5E-14 125.5 7.7 141 123-318 543-687 (807)
352 KOG0589 Serine/threonine prote 99.0 4.4E-10 9.5E-15 127.1 6.0 145 124-322 10-160 (426)
353 cd06621 PKc_MAPKK_Pek1_like Ca 99.0 2.9E-09 6.3E-14 117.7 12.4 141 124-319 7-156 (287)
354 KOG0664 Nemo-like MAPK-related 99.0 4.7E-09 1E-13 108.9 12.7 47 279-327 169-215 (449)
355 KOG4721 Serine/threonine prote 99.0 2.3E-10 5E-15 128.7 3.4 160 79-321 103-265 (904)
356 cd08227 PK_STRAD_alpha Pseudok 99.0 2.9E-09 6.3E-14 120.2 12.4 78 239-318 71-151 (327)
357 cd05100 PTKc_FGFR3 Catalytic d 99.0 3E-09 6.4E-14 120.5 12.3 79 239-319 90-185 (334)
358 cd05123 STKc_AGC Catalytic dom 99.0 3.5E-09 7.5E-14 114.0 12.2 78 240-320 66-145 (250)
359 cd07851 STKc_p38 Catalytic dom 99.0 1.9E-09 4.1E-14 122.6 10.6 75 241-320 94-170 (343)
360 cd07835 STKc_CDK1_like Catalyt 99.0 1.9E-09 4E-14 118.6 10.2 141 124-319 5-150 (283)
361 KOG1006 Mitogen-activated prot 99.0 1.6E-10 3.4E-15 119.8 1.4 140 124-321 70-221 (361)
362 cd05046 PTK_CCK4 Pseudokinase 99.0 3.3E-09 7E-14 116.2 11.8 137 124-318 11-167 (275)
363 cd08220 STKc_Nek8 Catalytic do 99.0 2.4E-09 5.1E-14 115.7 10.6 143 124-320 6-154 (256)
364 PHA03390 pk1 serine/threonine- 99.0 4E-09 8.8E-14 115.4 12.5 79 239-320 81-162 (267)
365 KOG0194 Protein tyrosine kinas 99.0 1.4E-09 3E-14 125.3 8.9 140 124-319 163-313 (474)
366 KOG0670 U4/U6-associated splic 98.9 1.1E-09 2.4E-14 122.4 7.5 146 125-324 439-593 (752)
367 cd07831 STKc_MOK Catalytic dom 98.9 3.2E-09 6.9E-14 116.5 11.1 140 124-319 5-150 (282)
368 PLN00009 cyclin-dependent kina 98.9 2.9E-09 6.3E-14 117.9 10.9 138 124-318 8-153 (294)
369 KOG0668 Casein kinase II, alph 98.9 6E-10 1.3E-14 113.1 4.7 142 124-321 44-186 (338)
370 cd07830 STKc_MAK_like Catalyti 98.9 3.6E-09 7.8E-14 116.3 11.4 79 239-320 70-151 (283)
371 cd05092 PTKc_TrkA Catalytic do 98.9 3E-09 6.5E-14 117.1 10.6 79 239-319 79-173 (280)
372 cd07866 STKc_BUR1 Catalytic do 98.9 1.9E-09 4.2E-14 120.0 9.2 75 242-319 90-166 (311)
373 cd08528 STKc_Nek10 Catalytic d 98.9 3.5E-09 7.7E-14 115.5 11.1 81 239-321 81-167 (269)
374 PTZ00266 NIMA-related protein 98.9 3.7E-09 8E-14 131.5 12.2 143 124-319 19-193 (1021)
375 cd05118 STKc_CMGC Catalytic do 98.9 2.8E-09 6.1E-14 116.9 10.1 144 124-322 5-152 (283)
376 cd05576 STKc_RPK118_like Catal 98.9 3.4E-09 7.3E-14 113.8 10.2 77 240-319 58-136 (237)
377 cd07849 STKc_ERK1_2_like Catal 98.9 2.6E-09 5.7E-14 121.0 9.7 74 241-319 82-157 (336)
378 cd05074 PTKc_Tyro3 Catalytic d 98.9 4.6E-09 9.9E-14 114.8 11.3 75 243-319 83-164 (273)
379 cd05044 PTKc_c-ros Catalytic d 98.9 2.9E-09 6.3E-14 116.1 9.5 81 239-319 71-162 (269)
380 cd08530 STKc_CNK2-like Catalyt 98.9 4.1E-09 8.8E-14 113.7 10.2 80 239-320 71-155 (256)
381 cd08218 STKc_Nek1 Catalytic do 98.9 6.1E-09 1.3E-13 112.7 11.5 142 124-320 6-153 (256)
382 cd07842 STKc_CDK8_like Catalyt 98.9 3.6E-09 7.8E-14 118.3 9.9 145 124-320 6-164 (316)
383 cd07829 STKc_CDK_like Catalyti 98.9 6.4E-09 1.4E-13 114.0 11.6 78 240-320 71-150 (282)
384 cd07856 STKc_Sty1_Hog1 Catalyt 98.9 5.4E-09 1.2E-13 118.1 11.2 140 123-319 15-159 (328)
385 PHA02882 putative serine/threo 98.9 7E-09 1.5E-13 115.3 11.9 74 242-319 102-177 (294)
386 cd07854 STKc_MAPK4_6 Catalytic 98.9 3.6E-09 7.9E-14 120.2 9.4 74 242-319 91-166 (342)
387 KOG3653 Transforming growth fa 98.9 4E-09 8.7E-14 117.5 9.2 141 124-320 216-368 (534)
388 KOG0669 Cyclin T-dependent kin 98.9 3.1E-10 6.6E-15 116.6 0.3 74 241-320 98-176 (376)
389 PHA03210 serine/threonine kina 98.9 2.4E-09 5.3E-14 128.0 7.9 79 239-320 235-319 (501)
390 cd05043 PTK_Ryk Pseudokinase d 98.9 9.9E-09 2.2E-13 112.7 11.8 138 124-319 12-168 (280)
391 cd07838 STKc_CDK4_6_like Catal 98.9 1.3E-08 2.8E-13 111.9 12.6 145 124-320 5-159 (287)
392 cd07855 STKc_ERK5 Catalytic do 98.9 3E-09 6.4E-14 120.5 7.6 75 241-319 82-158 (334)
393 cd07857 STKc_MPK1 Catalytic do 98.9 6.5E-09 1.4E-13 117.6 10.2 76 241-320 80-157 (332)
394 cd06616 PKc_MKK4 Catalytic dom 98.9 1E-08 2.3E-13 113.1 11.6 137 124-318 10-158 (288)
395 KOG0586 Serine/threonine prote 98.9 7.6E-09 1.6E-13 119.0 10.5 141 124-320 62-207 (596)
396 cd06618 PKc_MKK7 Catalytic dom 98.9 9.6E-09 2.1E-13 114.1 11.0 79 239-320 86-167 (296)
397 KOG0599 Phosphorylase kinase g 98.9 4.3E-09 9.4E-14 109.4 7.3 158 117-323 15-178 (411)
398 cd08226 PK_STRAD_beta Pseudoki 98.9 1E-08 2.3E-13 115.7 11.3 76 239-316 71-149 (328)
399 cd07852 STKc_MAPK15 Catalytic 98.8 1.1E-08 2.4E-13 115.8 11.3 140 124-320 13-159 (337)
400 cd07834 STKc_MAPK Catalytic do 98.8 4.5E-09 9.7E-14 118.6 7.9 77 241-321 78-156 (330)
401 smart00220 S_TKc Serine/Threon 98.8 6.4E-09 1.4E-13 110.4 8.6 79 240-321 60-140 (244)
402 cd08225 STKc_Nek5 Catalytic do 98.8 6.8E-09 1.5E-13 112.1 8.9 144 124-320 6-154 (257)
403 KOG1035 eIF-2alpha kinase GCN2 98.8 2.1E-09 4.5E-14 131.2 4.6 74 243-318 672-747 (1351)
404 KOG0579 Ste20-like serine/thre 98.8 1.5E-09 3.3E-14 123.3 2.7 80 239-320 101-182 (1187)
405 cd07858 STKc_TEY_MAPK_plant Ca 98.8 9.2E-09 2E-13 116.6 9.2 76 241-320 83-160 (337)
406 KOG0596 Dual specificity; seri 98.8 7.1E-09 1.5E-13 117.3 7.9 140 124-323 367-514 (677)
407 KOG4645 MAPKKK (MAP kinase kin 98.8 3.8E-09 8.3E-14 129.6 5.3 78 240-321 1307-1387(1509)
408 cd08216 PK_STRAD Pseudokinase 98.8 2.1E-08 4.6E-13 112.2 11.0 79 239-319 71-152 (314)
409 KOG0199 ACK and related non-re 98.8 5.4E-09 1.2E-13 120.6 6.0 140 124-321 116-265 (1039)
410 KOG0984 Mitogen-activated prot 98.8 2.3E-08 5.1E-13 100.4 9.4 80 239-322 117-203 (282)
411 KOG3087 Serine/threonine prote 98.8 7.3E-08 1.6E-12 95.9 12.2 145 122-316 11-164 (229)
412 KOG0607 MAP kinase-interacting 98.7 3.1E-08 6.6E-13 105.3 8.6 141 121-317 81-228 (463)
413 cd05154 ACAD10_11_like Acyl-Co 98.7 7.9E-08 1.7E-12 101.6 11.9 145 122-320 2-209 (223)
414 KOG0603 Ribosomal protein S6 k 98.7 2.4E-08 5.1E-13 115.6 7.9 80 239-321 388-469 (612)
415 KOG4717 Serine/threonine prote 98.7 3.2E-08 7E-13 110.5 8.5 149 123-324 23-175 (864)
416 cd08222 STKc_Nek11 Catalytic d 98.7 6.6E-08 1.4E-12 104.9 10.4 77 239-318 74-155 (260)
417 PRK15123 lipopolysaccharide co 98.7 1.5E-07 3.2E-12 102.7 13.0 101 198-317 75-194 (268)
418 KOG0696 Serine/threonine prote 98.7 1.5E-08 3.3E-13 110.5 4.8 74 240-317 423-499 (683)
419 KOG0986 G protein-coupled rece 98.7 3.4E-08 7.3E-13 109.4 6.7 144 124-323 191-342 (591)
420 KOG2052 Activin A type IB rece 98.6 1E-07 2.3E-12 105.7 10.5 142 124-320 217-368 (513)
421 KOG0576 Mitogen-activated prot 98.6 1.7E-08 3.6E-13 116.5 4.0 80 239-321 84-165 (829)
422 KOG0604 MAP kinase-activated p 98.6 1.9E-08 4.2E-13 106.1 4.1 141 121-319 65-215 (400)
423 KOG2270 Serine/threonine prote 98.6 1.6E-07 3.4E-12 102.6 11.1 194 117-351 144-340 (520)
424 KOG1027 Serine/threonine prote 98.6 2.5E-08 5.4E-13 117.9 5.1 77 242-320 578-663 (903)
425 KOG0690 Serine/threonine prote 98.6 3.6E-08 7.7E-13 104.8 5.3 144 119-317 168-317 (516)
426 KOG1152 Signal transduction se 98.6 1.2E-07 2.5E-12 108.0 9.2 150 123-318 566-720 (772)
427 KOG4279 Serine/threonine prote 98.6 9.4E-08 2E-12 110.2 8.6 76 243-319 648-727 (1226)
428 KOG2345 Serine/threonine prote 98.6 8E-08 1.7E-12 99.3 7.2 79 239-319 95-180 (302)
429 KOG0033 Ca2+/calmodulin-depend 98.6 4E-09 8.7E-14 108.2 -2.3 141 125-319 18-164 (355)
430 KOG0666 Cyclin C-dependent kin 98.6 8.1E-08 1.8E-12 101.9 6.4 78 242-320 103-188 (438)
431 KOG1025 Epidermal growth facto 98.5 7.4E-08 1.6E-12 113.2 5.9 84 239-324 769-854 (1177)
432 KOG1151 Tousled-like protein k 98.5 2.1E-07 4.5E-12 102.5 8.3 83 239-322 540-627 (775)
433 PF06293 Kdo: Lipopolysacchari 98.5 2.4E-07 5.2E-12 97.5 8.2 104 197-319 57-172 (206)
434 PRK10593 hypothetical protein; 98.5 1.1E-06 2.4E-11 97.8 13.6 93 100-255 2-101 (297)
435 KOG0695 Serine/threonine prote 98.5 1.8E-07 3.8E-12 99.7 5.6 76 239-317 323-400 (593)
436 KOG1345 Serine/threonine kinas 98.4 1.1E-06 2.3E-11 92.0 9.6 77 241-320 96-175 (378)
437 KOG1026 Nerve growth factor re 98.4 2.7E-07 5.9E-12 110.3 5.8 140 124-318 492-653 (774)
438 PLN00113 leucine-rich repeat r 98.4 1E-06 2.3E-11 114.3 11.6 129 123-316 695-830 (968)
439 TIGR02172 Fb_sc_TIGR02172 Fibr 98.4 2.2E-06 4.7E-11 91.5 11.7 32 285-319 153-184 (226)
440 KOG2268 Serine/threonine prote 98.3 1.1E-06 2.4E-11 94.6 7.7 181 124-351 98-279 (465)
441 KOG4257 Focal adhesion tyrosin 98.3 1.1E-06 2.3E-11 100.8 7.7 141 124-322 395-545 (974)
442 KOG0665 Jun-N-terminal kinase 98.3 5.7E-07 1.2E-11 96.3 4.9 76 240-321 94-171 (369)
443 KOG0671 LAMMER dual specificit 98.3 2.3E-06 5E-11 93.7 9.1 103 239-352 163-288 (415)
444 KOG0614 cGMP-dependent protein 98.3 7.4E-07 1.6E-11 100.1 4.8 76 242-321 495-573 (732)
445 COG2112 Predicted Ser/Thr prot 98.2 1.2E-05 2.7E-10 80.1 12.5 125 124-316 28-154 (201)
446 PRK09550 mtnK methylthioribose 98.2 2.8E-05 6.1E-10 89.2 17.4 109 96-253 6-117 (401)
447 cd05150 APH Aminoglycoside 3'- 98.2 2.5E-05 5.5E-10 84.3 15.1 34 285-320 163-196 (244)
448 cd05155 APH_ChoK_like_1 Unchar 98.2 2.2E-05 4.8E-10 84.3 14.3 33 285-320 164-197 (235)
449 PRK05231 homoserine kinase; Pr 98.1 3.5E-05 7.5E-10 86.8 14.9 50 95-151 5-54 (319)
450 PF01636 APH: Phosphotransfera 98.1 1.7E-05 3.6E-10 84.3 11.5 36 284-320 165-200 (239)
451 COG0515 SPS1 Serine/threonine 98.1 1.8E-05 3.9E-10 86.9 11.5 141 124-318 6-152 (384)
452 PF03881 Fructosamin_kin: Fruc 98.1 1.6E-05 3.5E-10 87.6 10.8 92 99-252 2-97 (288)
453 PLN02756 S-methyl-5-thioribose 98.1 8.9E-05 1.9E-09 84.8 16.4 59 92-155 4-68 (418)
454 KOG4278 Protein tyrosine kinas 98.0 3.8E-06 8.3E-11 96.1 4.6 139 123-320 272-417 (1157)
455 KOG0584 Serine/threonine prote 98.0 1.8E-06 4E-11 99.9 2.0 77 242-320 118-198 (632)
456 PRK12396 5-methylribose kinase 98.0 5E-05 1.1E-09 86.3 13.4 51 285-338 227-279 (409)
457 cd05157 ETNK_euk Ethanolamine 98.0 6.9E-05 1.5E-09 80.3 13.1 77 123-256 3-81 (235)
458 TIGR02721 ycfN_thiK thiamine k 98.0 4.5E-05 9.8E-10 83.1 11.8 137 124-320 2-178 (256)
459 KOG0200 Fibroblast/platelet-de 97.9 3.2E-05 6.9E-10 94.6 10.0 139 125-319 303-469 (609)
460 KOG1290 Serine/threonine prote 97.9 2.1E-05 4.4E-10 88.7 7.5 126 123-301 83-223 (590)
461 PLN00181 protein SPA1-RELATED; 97.8 2.5E-05 5.4E-10 99.0 5.8 74 241-317 54-129 (793)
462 PRK06148 hypothetical protein; 97.8 0.00044 9.4E-09 89.3 17.1 56 90-153 4-59 (1013)
463 PF14531 Kinase-like: Kinase-l 97.7 0.00014 3.1E-09 79.6 10.5 40 279-320 158-197 (288)
464 COG1686 DacC D-alanyl-D-alanin 97.7 0.00018 3.9E-09 82.3 11.3 54 495-561 36-91 (389)
465 cd05153 HomoserineK_II Homoser 97.7 0.00031 6.6E-09 78.2 12.9 32 285-318 175-206 (296)
466 PRK15442 beta-lactamase TEM; P 97.7 0.0028 6.2E-08 69.8 19.3 36 526-561 57-92 (284)
467 cd05152 MPH2' Macrolide 2'-Pho 97.6 0.001 2.2E-08 73.3 15.6 36 285-322 185-221 (276)
468 cd05156 ChoK_euk Choline Kinas 97.6 0.00029 6.3E-09 78.7 11.1 37 284-320 178-216 (302)
469 PLN02876 acyl-CoA dehydrogenas 97.6 0.00039 8.4E-09 88.3 13.3 107 96-256 17-133 (822)
470 PRK09902 hypothetical protein; 97.6 0.00066 1.4E-08 70.8 12.1 146 120-318 20-180 (216)
471 PF00768 Peptidase_S11: D-alan 97.6 0.00052 1.1E-08 73.8 11.5 55 494-561 8-64 (240)
472 TIGR01767 MTRK 5-methylthiorib 97.5 0.00062 1.3E-08 76.7 12.2 50 285-337 192-243 (370)
473 COG2334 Putative homoserine ki 97.5 0.0012 2.6E-08 74.2 13.1 41 123-165 31-72 (331)
474 TIGR00938 thrB_alt homoserine 97.5 0.0012 2.6E-08 74.0 13.1 32 285-318 187-218 (307)
475 PRK10001 D-alanyl-D-alanine ca 97.4 0.00058 1.3E-08 78.4 10.1 45 504-561 48-92 (400)
476 COG3001 Uncharacterized protei 97.4 0.0022 4.8E-08 66.8 12.9 94 99-255 2-99 (286)
477 PRK06149 hypothetical protein; 97.4 0.0012 2.6E-08 85.2 13.3 59 87-154 7-65 (972)
478 PRK11397 dacD D-alanyl-D-alani 97.3 0.00051 1.1E-08 78.6 8.4 44 504-560 45-88 (388)
479 PLN02236 choline kinase 97.3 0.0023 5E-08 72.9 13.0 161 101-320 18-234 (344)
480 PF10707 YrbL-PhoP_reg: PhoP r 97.2 0.0056 1.2E-07 63.8 13.7 155 123-318 6-173 (199)
481 PRK10793 D-alanyl-D-alanine ca 97.2 0.0019 4E-08 74.5 10.8 50 499-561 48-99 (403)
482 PRK11768 serine/threonine prot 97.1 0.0062 1.3E-07 68.8 14.4 54 94-154 8-61 (325)
483 KOG4158 BRPK/PTEN-induced prot 96.8 0.0016 3.4E-08 72.1 5.4 73 241-316 317-393 (598)
484 PRK11669 pbpG D-alanyl-D-alani 96.8 0.0048 1E-07 68.3 9.2 46 499-561 43-90 (306)
485 COG3173 Predicted aminoglycosi 96.6 0.024 5.3E-07 63.2 13.2 36 285-322 198-233 (321)
486 PLN02421 phosphotransferase, a 96.6 0.013 2.9E-07 66.3 11.4 33 287-320 184-216 (330)
487 KOG1240 Protein kinase contain 96.4 0.0004 8.7E-09 85.4 -2.5 46 268-316 123-168 (1431)
488 KOG0590 Checkpoint kinase and 96.0 0.0061 1.3E-07 74.2 4.9 69 246-319 400-471 (601)
489 PF04655 APH_6_hur: Aminoglyco 96.0 0.02 4.4E-07 61.9 8.0 31 124-154 8-38 (253)
490 PF01633 Choline_kinase: Choli 95.8 0.023 5.1E-07 59.8 7.8 34 285-320 143-177 (211)
491 PTZ00384 choline kinase; Provi 95.7 0.12 2.6E-06 59.7 13.5 102 97-256 29-138 (383)
492 PTZ00296 choline kinase; Provi 95.3 0.27 5.8E-06 57.9 14.8 114 84-255 70-194 (442)
493 KOG0606 Microtubule-associated 95.1 0.01 2.3E-07 73.4 2.3 37 279-317 156-192 (1205)
494 KOG0603 Ribosomal protein S6 k 94.9 0.04 8.6E-07 65.1 6.0 96 239-347 69-166 (612)
495 PRK10271 thiK thiamine kinase; 94.6 0.027 5.9E-07 57.9 3.3 34 285-321 77-110 (188)
496 KOG2269 Serine/threonine prote 94.6 0.15 3.3E-06 55.9 8.9 123 200-351 334-459 (531)
497 PF12260 PIP49_C: Protein-kina 93.4 0.073 1.6E-06 55.1 3.9 85 232-319 21-113 (188)
498 PF07914 DUF1679: Protein of u 93.3 1.6 3.4E-05 51.1 15.0 34 287-320 270-306 (414)
499 COG5072 ALK1 Serine/threonine 93.0 0.43 9.3E-06 53.5 9.1 65 108-172 143-209 (488)
500 PF13095 FTA2: Kinetochore Sim 92.9 1.1 2.4E-05 46.7 11.5 25 124-149 43-68 (207)
No 1
>COG0661 AarF Predicted unusual protein kinase [General function prediction only]
Probab=100.00 E-value=8.7e-73 Score=654.37 Aligned_cols=385 Identities=32% Similarity=0.556 Sum_probs=344.5
Q ss_pred HHHHHHHHHHHHHHHHhcChHHHHHHHHHhcCCCCCCHHHHHHHHHHHhCCCCCCHHHHHHHHHHHhCCChhhcccccCc
Q 002039 44 QRAHERNAKRVLNLIIKLEGLWVKLGQYLSTRADVLPEPYISLLKQLQDSLPPRPVQEVSQTIEREFGESMGGMFMDFVE 123 (977)
Q Consensus 44 ~~~~~~~a~~l~~~l~~lgg~~iK~GQ~ls~r~dllp~~~~~~L~~Lqd~~p~~~~~~v~~~l~~elg~~~~~~f~~~d~ 123 (977)
++..++.+++|+++|++|||+|||+||+||||+|++|++|+++|++|||+|||+|++++++++++++|.+++++|.+|++
T Consensus 51 ~~~~~~~~~rL~~~L~~LGPtfIK~GQ~LStR~Dl~p~e~~~eL~~LQD~vpp~~~~~~~~iie~eLG~~iee~F~eF~~ 130 (517)
T COG0661 51 EELREKRAERLRLALEELGPTFIKLGQILSTRPDLVPPEYAEELAKLQDRVPPFPFEEAERIIEEELGRPIEELFSEFEP 130 (517)
T ss_pred HHHhHhHHHHHHHHHHHhCCchhhhhhHHhcCccccCHHHHHHHHHhhcCCCCCCHHHHHHHHHHHhCCCHHHHHHHcCC
Confidence 34566788999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccccccccEEEEEEecCCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCC---CCCchhHHHHhhhcccccCcHH
Q 002039 124 TPLATASIAQVHRATLVDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQ---YDFNPIIDEWCKEAPKELDFNS 200 (977)
Q Consensus 124 ~piasaSigqV~~A~l~~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~---~~~~~~~~e~~~~l~~Eld~~~ 200 (977)
+|+|+|||||||+|++++|+.|||||||||+++.+..|+.+|+.+++++....+. +++..+++||.+.+..|+||++
T Consensus 131 ~PiAsASIaQVH~A~L~sG~~VAVKVqrPgi~~~i~~DL~il~~~a~~~~~~~~~~~~l~~~~vv~e~~~~l~~ElDy~~ 210 (517)
T COG0661 131 EPIASASIAQVHRAVLKSGEEVAVKVQRPGIRERIEADLKLLRRLARLIKRLPPGGRRLDLVEVVDEFEKRLREELDYRR 210 (517)
T ss_pred CchhhhhHhhheeEEecCCCEEEEEecCCChHHHHHHHHHHHHHHHHHHHHcCCccccCChHHHHHHHHHHHHHHhCHHH
Confidence 9999999999999999999999999999999999999999999999999988776 8999999999999999999999
Q ss_pred HHHHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeee--cCCceEEeeccCCCCCCChHHHHhcCCCHHHHHHHHHHHH
Q 002039 201 EAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ--SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY 278 (977)
Q Consensus 201 Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~--~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~ 278 (977)
||+|+++|+++|+ +.+.++||+||+ |+++||||||++|+++++...++..|.|.+.+++.++++|
T Consensus 211 EA~n~~~~~~nf~-------------~~~~v~VP~V~we~t~~~VLtmE~i~Gi~i~d~~~l~~~g~d~k~ia~~~~~~f 277 (517)
T COG0661 211 EAANAERFRENFK-------------DDPDVYVPKVYWEYTTRRVLTMEWIDGIKISDIAALKSAGIDRKELAELLVRAF 277 (517)
T ss_pred HHHHHHHHHHHcC-------------CCCCeEeceeehhccCCcEEEEEeeCCEecccHHHHHhcCCCHHHHHHHHHHHH
Confidence 9999999999997 467899999997 8999999999999999999999999999999999999999
Q ss_pred HHHHHhcCccccCCCCCCeEEccCCCCceEEEecccccccCHHHHHHHHHHHHHHHcCCHHHHHHHHHHcCcccC-CCcH
Q 002039 279 AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSSSMKQALAKMFFAAAEGDHVALLSAFAEMGLRLR-LDVP 357 (977)
Q Consensus 279 l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~~~r~~~~~l~~a~~~~d~~~~~~~~~~~g~~~~-~~~~ 357 (977)
++|++++||||+|||||||+|+.+ |+++++|||+++++++++|..++++++|+.++|++.+++.+.++|.... .+..
T Consensus 278 ~~q~~~dgffHaDpHpGNi~v~~~--g~i~~lDfGi~g~l~~~~r~~l~~~~~a~~~rD~~~v~~~~~~~G~~~~~~~~~ 355 (517)
T COG0661 278 LRQLLRDGFFHADPHPGNILVRSD--GRIVLLDFGIVGRLDPKFRRYLAELLLAFLNRDYDRVAELHVELGYVPPDTDRD 355 (517)
T ss_pred HHHHHhcCccccCCCccceEEecC--CcEEEEcCcceecCCHHHHHHHHHHHHHHHhhCHHHHHHHHHHhCCCCCccchH
Confidence 999999999999999999999966 9999999999999999999999999999999999999999999999753 3555
Q ss_pred HHHHHHHHHHHhccC-ChhhhHHHHHhHHHHHHhhHHHHHHHHHHhHHHHhhcCCCCCCCchHHHHHHHHHHHHHhhhcc
Q 002039 358 EQAMEVSTLFFRTSA-PANEAFETVKNLSEQRAKNLKVIQEKMKLNQKEVKRFNPVDAFPGDIVIFSRVLNLLRGLSSTM 436 (977)
Q Consensus 358 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~~~R~~~~leg~~~~L 436 (977)
....++..++-.... +.. .++ ..+.+.+.++ ...+|+ +++|++++++.|++.++||++++|
T Consensus 356 ~~~~~i~~~~~~~~~~~~~-------~~~-----~~~~~~~~~~----~~~~~~--~r~p~~l~ll~r~~~~vEg~~~~l 417 (517)
T COG0661 356 PLAAAIRAVLEPIYGKPLE-------EIS-----FGEILDKLFE----VARRFP--MRLPPELVLLQRTLLLVEGVGRQL 417 (517)
T ss_pred HHHHHHHHHHHhhhCCChh-------hcc-----HHHHHHHHHH----HHHhcC--ccCCHHHHHHHHHHHHHHHHHHhh
Confidence 555555444432211 111 111 1111122222 234444 789999999999999999999999
Q ss_pred CccchhhcccchhHHHHHhhhcCCC
Q 002039 437 NVRIVYLDIMRPFAEYVLQVGINKE 461 (977)
Q Consensus 437 ~p~~~~~~~~~~y~~~~l~~~~~~~ 461 (977)
+|++|++.++.||+.+....++.+.
T Consensus 418 dp~~~~~~~a~p~~~~~~~~~~~~~ 442 (517)
T COG0661 418 DPRFNLWAVAQPLLAKWLKKQLSPK 442 (517)
T ss_pred CccccHHHHhhHHHHHHHHHhhhHH
Confidence 9999999999999999999888765
No 2
>PRK04750 ubiB putative ubiquinone biosynthesis protein UbiB; Reviewed
Probab=100.00 E-value=2.6e-69 Score=630.14 Aligned_cols=427 Identities=30% Similarity=0.412 Sum_probs=353.8
Q ss_pred hHHHHHHHHHHHHHHHHHHHHhhhh-hhhhhhhHHHHHH---HHHHHHHHHHHHHHHhcChHHHHHHHHHhcCCCCCCHH
Q 002039 7 YRRRMSVFSMAILIYLDYKAVQQRE-KWIKKSKISALWQ---RAHERNAKRVLNLIIKLEGLWVKLGQYLSTRADVLPEP 82 (977)
Q Consensus 7 ~~R~~~~~~~~~~~~~~y~~~~~r~-~~~~~~~~~~~~~---~~~~~~a~~l~~~l~~lgg~~iK~GQ~ls~r~dllp~~ 82 (977)
+.|..++++++.+..+++...+... ++.........|. ......|++|+.+|++|||+|||+||+||||+|++|++
T Consensus 4 ~~R~~~I~~v~~~yg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~rlr~aLe~LGp~fIKlGQ~LStR~DllP~~ 83 (537)
T PRK04750 4 LFRLYKIIRVFLRYGLDELILSHRLTRPLRLWRRSLFWMPNRHKDKPRGERLRLALEELGPIFVKFGQMLSTRRDLFPPD 83 (537)
T ss_pred hHHHHHHHHHHHHhChHHHhhhccccchhhhhhhhhhhhhcccccccHHHHHHHHHHHcCcHHHHHHHHHHcCcccCCHH
Confidence 4577777777766555543221110 1111000000011 11235689999999999999999999999999999999
Q ss_pred HHHHHHHHHhCCCCCCHHHHHHHHHHHhCCChhhcccccCccccccccccEEEEEEecC-CCEEEEEEecCChhhhhHhh
Q 002039 83 YISLLKQLQDSLPPRPVQEVSQTIEREFGESMGGMFMDFVETPLATASIAQVHRATLVD-GRQVVVKVQHQGIKTIILED 161 (977)
Q Consensus 83 ~~~~L~~Lqd~~p~~~~~~v~~~l~~elg~~~~~~f~~~d~~piasaSigqV~~A~l~~-G~~VAVKv~~p~i~~~~~~D 161 (977)
|+++|++|||+|||+|++++++++++++|.+++++|.+||++|+|+|||||||+|++++ |++|||||+||++.+.+..|
T Consensus 84 ~~~eL~~Lqd~vpp~~~~~~~~~ie~elG~~~~~~F~~fd~~PlasaSiaQVh~A~l~~~G~~VAVKV~rP~i~~~I~~D 163 (537)
T PRK04750 84 IADELALLQDRVPPFDGALARAIIEKALGGPVEEWFDDFDIKPLASASIAQVHFARLKDNGREVVVKVLRPDILPVIDAD 163 (537)
T ss_pred HHHHHHHHHcCCCCCCHHHHHHHHHHHhCCCHHHHHHhcChhhhcCCCccEEEEEEECCCCCEEEEEEeCcchHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999987 99999999999999999999
Q ss_pred HHHHHHHHHHHHhhCC---CCCCchhHHHHhhhcccccCcHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeee
Q 002039 162 LKNAKSIVDWIAWAEP---QYDFNPIIDEWCKEAPKELDFNSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ 238 (977)
Q Consensus 162 l~~l~~l~~~~~~~~~---~~~~~~~~~e~~~~l~~Eld~~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~ 238 (977)
+++|+.++.++++..+ .+++.++++|+.+.+.+|+||.+|++|+.+++++|. +.+.++||++|+
T Consensus 164 l~~l~~~a~~l~~~~~~~~~l~~~~~v~e~~~~l~~ElD~~~Ea~N~~~~~~~f~-------------~~~~v~VP~v~~ 230 (537)
T PRK04750 164 LALMYRLARWVERLLPDGRRLKPREVVAEFEKTLHDELDLMREAANASQLRRNFE-------------DSDMLYVPEVYW 230 (537)
T ss_pred HHHHHHHHHHHHHhCcccccCCHHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHcc-------------CCCCeecceeec
Confidence 9999999999987654 356788999999999999999999999999999886 345799999997
Q ss_pred --cCCceEEeeccCCCCCCChHHHHhcCCCHHHHHHHHHHHHHHHHHhcCccccCCCCCCeEEccCC--CCceEEEeccc
Q 002039 239 --SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAYAHQIYVDGFFNGDPHPGNFLVSKDP--PHRPILLDFGL 314 (977)
Q Consensus 239 --~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~l~~i~~~G~~H~D~hPgNIlv~~~~--~g~i~LiDFG~ 314 (977)
|+++||||||++|++++++..+...+.+.+.+++..++.++.|+|++||||+|||||||+|+.++ +++++++|||+
T Consensus 231 d~st~~VLvmE~i~G~~l~d~~~l~~~g~d~~~la~~~v~~~~~Qif~~GffHaDpHPGNIlv~~~g~~~~~i~llDFGi 310 (537)
T PRK04750 231 DYCSETVMVMERMYGIPVSDVAALRAAGTDMKLLAERGVEVFFTQVFRDGFFHADMHPGNIFVSYDPPENPRYIALDFGI 310 (537)
T ss_pred ccCCCceEEEeeecCccHHhHHHHHhcCCCHHHHHHHHHHHHHHHHHhCCeeeCCCChHHeEEecCCCCCCeEEEEecce
Confidence 99999999999999999987777888999999999999999999999999999999999998651 13899999999
Q ss_pred ccccCHHHHHHHHHHHHHHHcCCHHHHHHHHHHcCccc-CCCcHHHHHHHHHHHHhcc-CChhhhHHHHHhHHHHHHhhH
Q 002039 315 TKKLSSSMKQALAKMFFAAAEGDHVALLSAFAEMGLRL-RLDVPEQAMEVSTLFFRTS-APANEAFETVKNLSEQRAKNL 392 (977)
Q Consensus 315 ~~~l~~~~r~~~~~l~~a~~~~d~~~~~~~~~~~g~~~-~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 392 (977)
++.++++.|..+++++.|+..+|+..+++.+.++|... ..+..++..++..++.... .|.. +++ ..
T Consensus 311 vg~l~~~~r~~l~~~~~a~~~~D~~~v~~~~~~~g~~~~~~~~~~l~~~i~~~~~~~~~~~l~-------~i~-----~~ 378 (537)
T PRK04750 311 VGSLNKEDKRYLAENFLAFFNRDYRRVAELHVESGWVPPDTRVEELEFAIRAVCEPIFDKPLA-------EIS-----FG 378 (537)
T ss_pred EEECCHHHHHHHHHHHHHHHhcCHHHHHHHHHHhCCCCCCCCHHHHHHHHHHHHHHHhCCCcc-------ccc-----HH
Confidence 99999999999999999999999999999999999864 3455555555544332211 1211 111 11
Q ss_pred HHHHHHHHHhHHHHhhcCCCCCCCchHHHHHHHHHHHHHhhhccCccchhhcccchhHHHHHhhhcCCCCCc
Q 002039 393 KVIQEKMKLNQKEVKRFNPVDAFPGDIVIFSRVLNLLRGLSSTMNVRIVYLDIMRPFAEYVLQVGINKEPSV 464 (977)
Q Consensus 393 ~~~~~~~~~~~~~~~~~~~~~~~P~~~~~~~R~~~~leg~~~~L~p~~~~~~~~~~y~~~~l~~~~~~~~~~ 464 (977)
+.+.+.+.. ..+|+ +.+|++++++.|++.++||++++|||++|+++.++||+++.+.+++++....
T Consensus 379 ~~l~~l~~~----~r~~~--~~ip~~l~ll~ktl~~lEG~~r~LdP~~d~~~~a~p~l~~~~~~~~~~~~~~ 444 (537)
T PRK04750 379 HVLLRLFNT----ARRFN--VEIQPQLVLLQKTLLNVEGLGRQLDPQLDLWKTAKPFLERWMKEQVGPRALV 444 (537)
T ss_pred HHHHHHHHH----HHHCC--CcccHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHhcChHHHH
Confidence 223333333 45555 7899999999999999999999999999999999999999999999875543
No 3
>TIGR01982 UbiB 2-polyprenylphenol 6-hydroxylase. This model represents the enzyme (UbiB) which catalyzes the first hydroxylation step in the ubiquinone biosynthetic pathway in bacteria. It is believed that the reaction is 2-polyprenylphenol - 6-hydroxy-2-polyprenylphenol. This model finds hits primarily in the proteobacteria. The gene is also known as AarF in certain species.
Probab=100.00 E-value=7.8e-66 Score=596.64 Aligned_cols=381 Identities=30% Similarity=0.495 Sum_probs=334.8
Q ss_pred HHHHHHHHHHHhcChHHHHHHHHHhcCCCCCCHHHHHHHHHHHhCCCCCCHHHHHHHHHHHhCCChhhcccccCcccccc
Q 002039 49 RNAKRVLNLIIKLEGLWVKLGQYLSTRADVLPEPYISLLKQLQDSLPPRPVQEVSQTIEREFGESMGGMFMDFVETPLAT 128 (977)
Q Consensus 49 ~~a~~l~~~l~~lgg~~iK~GQ~ls~r~dllp~~~~~~L~~Lqd~~p~~~~~~v~~~l~~elg~~~~~~f~~~d~~pias 128 (977)
..|++++++|++|||+|||+||+||+|+|+||++|+++|++|||++||+|++++++++++++|.+++++|.+||++|+|+
T Consensus 48 ~~~~~l~~~l~~lGp~fiKlGQ~lS~r~dllp~~~~~~L~~Lqd~v~p~~~~~~~~~l~~elg~~~~~~F~~fd~~plas 127 (437)
T TIGR01982 48 SRGERLRLALEELGPTFIKFGQTLSTRADLLPADIAEELSLLQDRVPPFDFKVARKVIEAALGGPLEELFAEFEEKPLAA 127 (437)
T ss_pred cHHHHHHHHHHHcCchhHHHhHHHHhCcccCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHhCcCHHHHHhhCCCcceee
Confidence 56899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccEEEEEEecCCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCC---CCCCchhHHHHhhhcccccCcHHHHHHH
Q 002039 129 ASIAQVHRATLVDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEP---QYDFNPIIDEWCKEAPKELDFNSEAENT 205 (977)
Q Consensus 129 aSigqV~~A~l~~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~---~~~~~~~~~e~~~~l~~Eld~~~Ea~n~ 205 (977)
|||||||+|++++|++||||||||++.+.+..|+++++.++.++.+..+ .+++..+++||...+.+|+||.+||+|+
T Consensus 128 aSigQVh~A~l~~G~~VaVKv~rp~i~~~i~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eldf~~Ea~n~ 207 (437)
T TIGR01982 128 ASIAQVHRARLVDGKEVAVKVLRPGIEKTIAADIALLYRLARIVERLSPDSRRLRPTEVVKEFEKTLRRELDLRREAANA 207 (437)
T ss_pred eehhheEEEEecCCCEEEEEeeCCCcHHHHHHHHHHHHHHHHHHHHhCccccccCHHHHHHHHHHHHHHHHCHHHHHHHH
Confidence 9999999999999999999999999999999999999999998887644 3577899999999999999999999999
Q ss_pred HHHHHHhCCCCCCCCCCCCCCCCCCeEeceeee--cCCceEEeeccCCCCCCChHHHHhcCCCHHHHHHHHHHHHHHHHH
Q 002039 206 RIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ--SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAYAHQIY 283 (977)
Q Consensus 206 ~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~--~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~l~~i~ 283 (977)
.+|+++++ +.+.++||++|+ |+++||||||++|.+|.+.......+.+...++..+++.++.|+|
T Consensus 208 ~~~~~~~~-------------~~~~v~vP~v~~~~~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~ia~~~~~~~l~ql~ 274 (437)
T TIGR01982 208 SELGENFK-------------NDPGVYVPEVYWDRTSERVLTMEWIDGIPLSDIAALDEAGLDRKALAENLARSFLNQVL 274 (437)
T ss_pred HHHHHhcC-------------CCCCEEeCCEehhhcCCceEEEEeECCcccccHHHHHhcCCCHHHHHHHHHHHHHHHHH
Confidence 99999886 356899999997 899999999999999999876655667788899999999999999
Q ss_pred hcCccccCCCCCCeEEccCCCCceEEEecccccccCHHHHHHHHHHHHHHHcCCHHHHHHHHHHcCccc-CCCcHHHHHH
Q 002039 284 VDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSSSMKQALAKMFFAAAEGDHVALLSAFAEMGLRL-RLDVPEQAME 362 (977)
Q Consensus 284 ~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~~~r~~~~~l~~a~~~~d~~~~~~~~~~~g~~~-~~~~~~~~~~ 362 (977)
.+|+||+|||||||+++++ ++++|+|||+++.++++.+..+.+++.++..+|++.+.+.+.++|+.. ..|.+.+..+
T Consensus 275 ~~g~~H~D~hPgNilv~~~--g~i~liDfG~~~~l~~~~r~~l~~l~~a~~~~D~~~l~~~l~~~g~~~~~~d~~~~~~~ 352 (437)
T TIGR01982 275 RDGFFHADLHPGNIFVLKD--GKIIALDFGIVGRLSEEDRRYLAEILYGFLNRDYRRVAEVHFDAGYVPSDTDMAEFEQA 352 (437)
T ss_pred hCCceeCCCCcccEEECCC--CcEEEEeCCCeeECCHHHHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCHHHHHHH
Confidence 9999999999999999855 899999999999999999999999999999999999999999999864 3455555555
Q ss_pred HHHHHHhccC-ChhhhHHHHHhHHHHHHhhHHHHHHHHHHhHHHHhhcCCCCCCCchHHHHHHHHHHHHHhhhccCccch
Q 002039 363 VSTLFFRTSA-PANEAFETVKNLSEQRAKNLKVIQEKMKLNQKEVKRFNPVDAFPGDIVIFSRVLNLLRGLSSTMNVRIV 441 (977)
Q Consensus 363 ~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~~~R~~~~leg~~~~L~p~~~ 441 (977)
+..++..... +. .+++ ..+.+.+.+.. +.+++ +++|++++++.|++.++||++++|||++|
T Consensus 353 ~~~~~~~~~~~~~-------~~~~-----~~~~~~~~~~~----~~~~~--~~~p~~~~~l~r~l~~leg~~~~L~p~~~ 414 (437)
T TIGR01982 353 IRAIGEPIFGQPL-------KEIS-----VGRLLAGLFKI----TRDFN--MELQPQLLLLQKTLLTVEGVGRQLDPDLN 414 (437)
T ss_pred HHHHHHHHhCCCh-------hhCC-----HHHHHHHHHHH----HHHCC--ccCCHHHHHHHHHHHHHHHHHHHhCCCCC
Confidence 5544322211 11 1111 11222333332 34444 68999999999999999999999999999
Q ss_pred hhcccchhHHHHHhhhcCCCC
Q 002039 442 YLDIMRPFAEYVLQVGINKEP 462 (977)
Q Consensus 442 ~~~~~~~y~~~~l~~~~~~~~ 462 (977)
+.+.++||+.+.+.++++++.
T Consensus 415 ~~~~~~p~~~~~~~~~~~~~~ 435 (437)
T TIGR01982 415 MWKVAEPFVKRWIRKRLGPKA 435 (437)
T ss_pred HHHHHHHHHHHHHHhhcChhc
Confidence 999999999999998887654
No 4
>KOG1235 consensus Predicted unusual protein kinase [General function prediction only]
Probab=100.00 E-value=3e-66 Score=595.67 Aligned_cols=403 Identities=32% Similarity=0.522 Sum_probs=338.2
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHhcChHHHHHHHHHhcCCCCCCHHHHHHHHHHHhCCCCCCHHHHHHHHHHHhCCChh
Q 002039 36 KSKISALWQRAHERNAKRVLNLIIKLEGLWVKLGQYLSTRADVLPEPYISLLKQLQDSLPPRPVQEVSQTIEREFGESMG 115 (977)
Q Consensus 36 ~~~~~~~~~~~~~~~a~~l~~~l~~lgg~~iK~GQ~ls~r~dllp~~~~~~L~~Lqd~~p~~~~~~v~~~l~~elg~~~~ 115 (977)
.+.+.......|.+.|++|++++++|||+|||+||+||+|+|++|+||.++|+.|||++||+|++++.+++++|+|.+++
T Consensus 79 ~e~~~~~~~~~~~~~a~~L~e~~~~nGg~yIKlGQ~lst~~dllP~Eyv~~L~~LqD~~Pp~~~ee~~~i~e~ElG~~ie 158 (538)
T KOG1235|consen 79 SESRLSKLSKVLLSAAERLLELFLRNGGTYIKLGQHLSTRPDLLPKEYVKTLSELQDQAPPFPWEEAFKIFEEELGAPIE 158 (538)
T ss_pred hhhhHHHHHHHHHHHHHHHHHHHHHcCCeEEEechhhccccccCcHHHHHHHHHHhccCCCCCHHHHHHHHHHHhCCCHH
Confidence 34555666778888889999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hcccccCccccccccccEEEEEEecCCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccc
Q 002039 116 GMFMDFVETPLATASIAQVHRATLVDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKE 195 (977)
Q Consensus 116 ~~f~~~d~~piasaSigqV~~A~l~~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~E 195 (977)
++|.+||++|||+||+||||+|++++|+.||||||||++++.+..|+.+++.++..+.+..|.+++.++++|+.+.+.+|
T Consensus 159 ~if~~f~~~piaaASlaQVhrA~L~~G~~VaVKVQ~P~l~~~~~~Dl~~~~~~~~~l~k~~p~~~~~~lvdE~~~~L~~E 238 (538)
T KOG1235|consen 159 DIFSEFDEEPIAAASLAQVHRARLKNGEDVAVKVQHPGLEKLIMLDLRNLRLLAKVLQKFFPDFDLVWLVDEIAKSLPQE 238 (538)
T ss_pred HHHHhcCcchhhhcchhheEEEEecCCCEEEEEecCcChHHHHHHHHHHHHHHHHHHHHhCcCCchhhHHHHHHhhhHhh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCcHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeee--cCCceEEeeccCCCCCCChHHHHhcCCCHHHHHHH
Q 002039 196 LDFNSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ--SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEE 273 (977)
Q Consensus 196 ld~~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~--~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~ 273 (977)
+||.+||+|.++++++|++.+ ....|+||+||+ |+++|||||||+|++++|++.++..++++..++..
T Consensus 239 LDF~~EA~Nae~~~~~f~~~~----------~~~~V~VP~Vy~~~st~RVLtME~~~G~~i~Dl~~i~~~gi~~~~i~~~ 308 (538)
T KOG1235|consen 239 LDFTKEAKNAERFRENFKDFS----------LLTYVLVPKVYWDLSTKRVLTMEYVDGIKINDLDAIDKRGISPHDILNK 308 (538)
T ss_pred cchHHHHHhHHHHHHHHHhcc----------cccceeCCeehhhcCcceEEEEEecCCccCCCHHHHHHcCCCHHHHHHH
Confidence 999999999999999998432 123699999998 89999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhcCccccCCCCCCeEEccC--CCCceEEEecccccccCHHHHHHHHHHHHHHHcCCHHHHHHHHHHcCcc
Q 002039 274 ITRAYAHQIYVDGFFNGDPHPGNFLVSKD--PPHRPILLDFGLTKKLSSSMKQALAKMFFAAAEGDHVALLSAFAEMGLR 351 (977)
Q Consensus 274 l~~~~l~~i~~~G~~H~D~hPgNIlv~~~--~~g~i~LiDFG~~~~l~~~~r~~~~~l~~a~~~~d~~~~~~~~~~~g~~ 351 (977)
+.++|++|||.+||||||||||||+|+++ ++++++++|||+++.+++..|..|+++|+|+...|...+...+..+|+.
T Consensus 309 l~~~~~~qIf~~GffHaDPHPGNilv~~~~~~~~~ivllDhGl~~~is~~~r~~~~~~~~a~~~~d~~~~~~~~~~~g~~ 388 (538)
T KOG1235|consen 309 LVEAYLEQIFKTGFFHADPHPGNILVRPNPEGDEEIVLLDHGLYAVISHKTRKDYAELWLALVFEDEKAMQALAEQLGLG 388 (538)
T ss_pred HHHHHHHHHHhcCCccCCCCCCcEEEecCCCCCccEEEEcccccccccHHHHHHHHHHHHHHhcccHHHHHHHHHHhccc
Confidence 99999999999999999999999999964 3578999999999999999999999999999999999999999999987
Q ss_pred cCCCcHHHHHHHHHHHHhccCChhhhHHHHHhHHHHHHhhHHHHHHHHHHhHHHHhhcCCCCCCCchHHHHHHHHHHHHH
Q 002039 352 LRLDVPEQAMEVSTLFFRTSAPANEAFETVKNLSEQRAKNLKVIQEKMKLNQKEVKRFNPVDAFPGDIVIFSRVLNLLRG 431 (977)
Q Consensus 352 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~~~R~~~~leg 431 (977)
.+.+.+.++.++.........+.. ....+.........+.+.....+....+. +.++|..+.++.|+..++++
T Consensus 389 ~d~~~~~fa~~l~~~~~~s~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------L~~~p~~i~li~k~~~l~r~ 461 (538)
T KOG1235|consen 389 LDDLYPLFATALTGRPWDSVIGAG-ITKYLKGLEEDADENQKIASAKFPGISQL------LRRMPREILLILKTNDLLRG 461 (538)
T ss_pred cchhhhhhHHHHhCCchhhccccc-hhhhhhhhhhhhhhHHHHHHHHhhHHHHH------HHhchHhhhhhcccHHHHHh
Confidence 544445454444332222211100 00001111111111111122222211111 24679999999999999999
Q ss_pred hhhccCccchhhcccchhHHHHHh
Q 002039 432 LSSTMNVRIVYLDIMRPFAEYVLQ 455 (977)
Q Consensus 432 ~~~~L~p~~~~~~~~~~y~~~~l~ 455 (977)
+...++...+....+..+...+++
T Consensus 462 ~~~~l~~~~~~~~~f~~~~~~~~~ 485 (538)
T KOG1235|consen 462 LSSNLGIPSSLERSFLEMARLCLR 485 (538)
T ss_pred HHHHhccccccchHHHHHHHHHHH
Confidence 999999998865455555555554
No 5
>PRK11289 ampC beta-lactamase/D-alanine carboxypeptidase; Provisional
Probab=100.00 E-value=6e-47 Score=431.93 Aligned_cols=240 Identities=22% Similarity=0.276 Sum_probs=202.3
Q ss_pred cchHHHHHHHHHHHhccCCCccceEEEEEecCeeEEEeeccccCCCCCCCCCCCCcceeecchHHHHHHHHHHHHHCCCc
Q 002039 475 HSDVEAKLRDFLVELGNDGKILGIQVCAYKDGEVIIDTSAGMLGRYDPRPVQPDSLFPVFSVTKGITAGMLHWLVDNGKL 554 (977)
Q Consensus 475 ~~~~~~~l~~~l~~~~~~~~~pG~svaVv~~g~~v~~~~~G~~~~~~~~~~t~~T~f~i~SiTK~~ta~~v~~lv~~G~l 554 (977)
..++.+.+++.+++.++++.+||++++|+++|++++. +||+++...+.|++++|+|+|||+||+||++++++|+|+|+|
T Consensus 28 ~~~~~~~vd~~i~~~~~~~~~pG~~vaV~~~g~~~~~-~~G~~~~~~~~p~~~dT~f~iaSvTK~fTa~~i~~Lve~G~L 106 (384)
T PRK11289 28 PQQLKDIVDRTITPLMEEQDIPGMAVAVIYNGKPYYF-NYGVADKATGQPVTQDTLFELGSVSKTFTATLAGYAQARGEL 106 (384)
T ss_pred hHHHHHHHHHHHHHHHHhCCCCeEEEEEEECCEEEEE-eeeecccccCCCCCCCCEEeeeechHHHHHHHHHHHHHCCCC
Confidence 3477889999999999999999999999999998875 899999999999999999999999999999999999999999
Q ss_pred CcCCchhhhccccccCCCCCCcHHHHhcCcCC-CCCCcCCCCCCCCcCCCCHHHHHHHHHccCCCCCCCCceecccCcHH
Q 002039 555 KLEENIANIWPEFKSNGKDLIKVHHVLNHTSG-LHNVSVDLSSENPLLICDWDECLNRIALSAPETEPGQEQLYHYLSFG 633 (977)
Q Consensus 555 ~ld~~v~~ylP~~~~~~~~~iTir~LLsHtSG-l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~pG~~~~Ysn~~~~ 633 (977)
+|||||.+|||+|....+++|||||||+|||| ++...+ ....+.+++++.+...++.++||+.|.|||.+|.
T Consensus 107 ~Lddpv~~ylP~~~~~~~~~ITir~LLtHtSGg~p~~~~-------~~~~~~~~l~~~l~~~~~~~~PG~~~~YSn~~y~ 179 (384)
T PRK11289 107 SLSDPASKYLPELKGSPFDGITLLHLATYTAGGLPLQVP-------DEVKDDAQLLRYFQAWQPAYAPGTQRLYSNPSIG 179 (384)
T ss_pred CCCCcHHHhCcccCCCCcCCeEHHHHhccccCCCcccCC-------cccCCHHHHHHHHHhCCCCCCCCCCeeechHHHH
Confidence 99999999999998766778999999999995 875422 1235678888999888999999999999999998
Q ss_pred HHHHHHHHHHhCCCHHHHHHHHcccccCCCCccCCCCCCCcccCcceecccCCccccccCCCCCCCCCCCCCCCcchhhh
Q 002039 634 WLCGGIIERASGKKFQEILEEGIIQPLSIDGELYIGIPPGVESRLASLTIDTDDLNKVSGINNRPDLRLPSSFQPDKISQ 713 (977)
Q Consensus 634 ~llg~iiE~vtG~~~~~~l~~~if~PLGm~~t~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~p~~~~p~~~~~~~~~~ 713 (977)
|||.|||++||++|++|++++||+||||++|.+ ..+.....+.+.+|...... .. .
T Consensus 180 -lLg~iiE~vtg~~~~~~l~~~I~~PLGM~~T~~-~~~~~~~~~~a~gy~~~g~~--~~---~----------------- 235 (384)
T PRK11289 180 -LFGYLAAKAMGQPFEQLMEQRLFPPLGLTHTYI-NVPEAEMADYAQGYNKEGKP--VR---V----------------- 235 (384)
T ss_pred -HHHHHHHHHHCcCHHHHHHHhhhhhcCCCcccc-CCCccccccceeeeccCCCc--ee---c-----------------
Confidence 999999999999999999999999999999855 34445556677666432211 00 0
Q ss_pred hhhcccccccchhccccccCccceecCHHHHHHHHHHHHcCCCCC
Q 002039 714 LAAITPAVFNMLNIRRAIIPAANGHCSARALARYYAALADGGVVP 758 (977)
Q Consensus 714 ~~~~~~~~~~~~~~~~~~~~agG~~sTa~Dlar~~~~ll~~g~~~ 758 (977)
.+.+ ...|+||++||++||+||++++++++.++
T Consensus 236 ----------~~~~--~~~~aGgl~ST~~Dl~~f~~all~~~~l~ 268 (384)
T PRK11289 236 ----------NPGV--LDAEAYGVKSTAADMLRFVQANLGPQDLD 268 (384)
T ss_pred ----------CCCc--ccCCceeeEECHHHHHHHHHHHcCCCCCC
Confidence 0000 11278999999999999999999987653
No 6
>PRK10662 beta-lactam binding protein AmpH; Provisional
Probab=100.00 E-value=2.5e-46 Score=427.20 Aligned_cols=248 Identities=18% Similarity=0.218 Sum_probs=200.4
Q ss_pred CCcchHHHHHHHHHHHhccCCCccceEEEEEecCeeEEEeeccccCCCCCCCCCCCCcceeecchHHHHHHHHHHHHHCC
Q 002039 473 PIHSDVEAKLRDFLVELGNDGKILGIQVCAYKDGEVIIDTSAGMLGRYDPRPVQPDSLFPVFSVTKGITAGMLHWLVDNG 552 (977)
Q Consensus 473 p~~~~~~~~l~~~l~~~~~~~~~pG~svaVv~~g~~v~~~~~G~~~~~~~~~~t~~T~f~i~SiTK~~ta~~v~~lv~~G 552 (977)
|...++.+.+++.+++.++++.+||++|+|+++|++++ .+||+++...+.|++++|+|+|||+||+|||+++++|+|+|
T Consensus 26 ~~~~~~~~~id~~~~~~~~~~~~pG~~v~V~~~g~i~~-~~~G~~~~~~~~~~t~dT~f~iaSiTK~fta~ai~~Lve~G 104 (378)
T PRK10662 26 ADPLLASDIVDRYAEHIFYGSGATGMALVVIDGNQRVF-RSYGETRPGNNVRPQLDSLIRIASITKLMTSEVLVKLADDG 104 (378)
T ss_pred CCHHHHHHHHHHHHHHHHhcCCCCeEEEEEEECCEEEE-EeeeeccCCCCCCCCCCCeEEeeeecHHHHHHHHHHHHHCC
Confidence 44567888999999999999999999999999999888 68999999999999999999999999999999999999999
Q ss_pred CcCcCCchhhhcccccc---CCCCCCcHHHHhcCcCCCCCCcCCCCCCCCcC-CCCHHHHHHHHHccCCCCCCCCceecc
Q 002039 553 KLKLEENIANIWPEFKS---NGKDLIKVHHVLNHTSGLHNVSVDLSSENPLL-ICDWDECLNRIALSAPETEPGQEQLYH 628 (977)
Q Consensus 553 ~l~ld~~v~~ylP~~~~---~~~~~iTir~LLsHtSGl~~~~~~~~~~~~~~-~~~~~~~~~~l~~~~~~~~pG~~~~Ys 628 (977)
+|+||+||.+|+|++.. ...+.|||||||+||||++.+........+.. ..+.++.++.+...++.++||+.|.||
T Consensus 105 ~l~lddpv~~ylP~~~~~~~~~~~~ITir~LLsHtSGl~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~PGt~~~Ys 184 (378)
T PRK10662 105 TVKLTDPLSKYAPPGARVPTYNGQPITLLNLATHTSALPREQPGGAAHRPVFVWPTREQRWKWLSTAKLKAAPGTQAAYS 184 (378)
T ss_pred CCCCCCcHHHhCcccccCCCCCCCCccHHHHhhCcCCCCCCCCCccccCCcccCCCHHHHHHHHhcCCCcCCCCCceeec
Confidence 99999999999998532 22268999999999999997643211111111 125677888888889999999999999
Q ss_pred cCcHHHHHHHHHHHHhCCCHHHHHHHHcccccCCCCccCCCCCCCcccCcceecccCCccccccCCCCCCCCCCCCCCCc
Q 002039 629 YLSFGWLCGGIIERASGKKFQEILEEGIIQPLSIDGELYIGIPPGVESRLASLTIDTDDLNKVSGINNRPDLRLPSSFQP 708 (977)
Q Consensus 629 n~~~~~llg~iiE~vtG~~~~~~l~~~if~PLGm~~t~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~p~~~~p~~~~~ 708 (977)
|.+|. |||.|||++||++|++|++++||+||||++|.|... +....+.+.+|. . .. . .
T Consensus 185 n~~~~-lLg~iie~vtg~~~~~~l~~~I~~PLGM~~T~~~~~-~~~~~~~a~g~~--~-~~--~------~--------- 242 (378)
T PRK10662 185 NLAFD-LLADALAKAAGKPYTQLLREKITRPLGMKDTTFTPS-PDQCARLMVGEK--G-AS--P------C--------- 242 (378)
T ss_pred chhHH-HHHHHHHHHhCCCHHHHHHHhCccccCCCCCcCCCC-hhhhhhcccccC--C-CC--C------C---------
Confidence 99999 999999999999999999999999999999976432 223334444430 0 00 0 0
Q ss_pred chhhhhhhcccccccchhccccccCccceecCHHHHHHHHHHHHcCCCCCCC
Q 002039 709 DKISQLAAITPAVFNMLNIRRAIIPAANGHCSARALARYYAALADGGVVPPP 760 (977)
Q Consensus 709 ~~~~~~~~~~~~~~~~~~~~~~~~~agG~~sTa~Dlar~~~~ll~~g~~~~~ 760 (977)
. . .....++||++||++||+||+++++++|.+...
T Consensus 243 -------------~-~---~~~~~~aGGl~sT~~Dmak~~~~ll~~g~~~~~ 277 (378)
T PRK10662 243 -------------N-N---TLAAIGSGGVYSTPGDMMRWMQQFLSSDNYQRS 277 (378)
T ss_pred -------------c-c---ccccCCCCccccCHHHHHHHHHHHhCCCCCCcc
Confidence 0 0 012348899999999999999999998876543
No 7
>PRK03642 putative periplasmic esterase; Provisional
Probab=100.00 E-value=7.4e-45 Score=422.18 Aligned_cols=333 Identities=21% Similarity=0.328 Sum_probs=238.3
Q ss_pred chHHHHHHHHHHHhccCCCccceEEEEEecCeeEEEeeccccCCC-------CCCCCCCCCcceeecchHHHHH-HHHHH
Q 002039 476 SDVEAKLRDFLVELGNDGKILGIQVCAYKDGEVIIDTSAGMLGRY-------DPRPVQPDSLFPVFSVTKGITA-GMLHW 547 (977)
Q Consensus 476 ~~~~~~l~~~l~~~~~~~~~pG~svaVv~~g~~v~~~~~G~~~~~-------~~~~~t~~T~f~i~SiTK~~ta-~~v~~ 547 (977)
....+++++.+++.++. .+||++++|+++|+++++++||+++.. .+.|+++||+|+|||+||+||+ +++++
T Consensus 37 ~~~~~~ld~~i~~~~~~-~~pG~sv~V~~~g~iv~~~~~G~~~~~~g~~~~~~~~~~t~dT~f~iaSiTK~ftt~~ai~~ 115 (432)
T PRK03642 37 SEKLNQMDRWISQQIDA-GYPGVNLLIIKDNQIVYRKAWGYAKKYDGSTLLAHPVKATTNTMYDLASNTKMYATNFALQK 115 (432)
T ss_pred HHHHHHHHHHHHHHHhc-CCCeEEEEEEECCEEEEEeeeeeccccccccccccCCCCCCCCEEechhhhHHHHHHHHHHH
Confidence 34467888888888875 599999999999999999999998843 4578999999999999999974 78899
Q ss_pred HHHCCCcCcCCchhhhccccccC------CCCCCcHHHHhcCcCCCCCCcCCCCCC--CCcCCCCHHHHHHHHHccCCCC
Q 002039 548 LVDNGKLKLEENIANIWPEFKSN------GKDLIKVHHVLNHTSGLHNVSVDLSSE--NPLLICDWDECLNRIALSAPET 619 (977)
Q Consensus 548 lv~~G~l~ld~~v~~ylP~~~~~------~~~~iTir~LLsHtSGl~~~~~~~~~~--~~~~~~~~~~~~~~l~~~~~~~ 619 (977)
|||+|+|+|||||.+|||+|... +++.|||||||+||||++.+....... ......+.+++++.+...++.+
T Consensus 116 Lve~G~l~ldd~v~~ylP~~~~~~~~~~~~~~~ITir~LLtHtSGl~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~ 195 (432)
T PRK03642 116 LVSEGKLDVNDLISKYIPGFKDSPGDKIKGKNTLRIIDLLHHSAGFPADPQYPNKAVAGALYSQDKSTTLEMIKKTPLEY 195 (432)
T ss_pred HHHCCCCCCcCcHHHhcccccccccccccCCCCCcHHHHhhCccCCCCCcccccccccccccccCHHHHHHHHhhCCCcC
Confidence 99999999999999999999753 246899999999999999753221111 1111235677888888899999
Q ss_pred CCCCceecccCcHHHHHHHHHHHHhCCCHHHHHHHHcccccCCCCccCCCCCCC-cccCcceecccCC-ccccccCCCCC
Q 002039 620 EPGQEQLYHYLSFGWLCGGIIERASGKKFQEILEEGIIQPLSIDGELYIGIPPG-VESRLASLTIDTD-DLNKVSGINNR 697 (977)
Q Consensus 620 ~pG~~~~Ysn~~~~~llg~iiE~vtG~~~~~~l~~~if~PLGm~~t~~~~~~~~-~~~~~a~~~~~~~-~~~~~~~~~~~ 697 (977)
+||+.|.|||.+|. |||.|||+++|++|++|++++||+||||++|+|...... ...+.+....... ....+ ..
T Consensus 196 ~PG~~~~Ysn~~~~-lLg~iie~vtG~~~~~~~~e~If~PLgM~~t~~~~~~~~~~~~~~a~~~~~g~~~~~~~----~~ 270 (432)
T PRK03642 196 QPGSKHIYSDVDYM-LLGFIVESITGQPLDRYVEESIYRPLGLTHTVFNPLQKGFKPQQIAATELNGNTRDGVI----HF 270 (432)
T ss_pred CCCCceEecchHHH-HHHHHHHHHhCCCHHHHHHHhhhcccCCCcCcccCccccccHhhcCcccccCccccccc----cc
Confidence 99999999999998 999999999999999999999999999999976422110 1111111110000 00000 00
Q ss_pred CCCCCCCCCCcchhhhhhhcccccccchhc--cccccCccceecCHHHHHHHHHHHHcCCCCCCCCCCCCCCCCCCCCCC
Q 002039 698 PDLRLPSSFQPDKISQLAAITPAVFNMLNI--RRAIIPAANGHCSARALARYYAALADGGVVPPPHSRLSKPPLGSHPHI 775 (977)
Q Consensus 698 p~~~~p~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~agG~~sTa~Dlar~~~~ll~~g~~~~~~~~~~~~~~~~~~~~ 775 (977)
|..+.... .+ ...+...+ .+...++||+++|++||+||+++++++|.+++.+
T Consensus 271 p~~~~~~~---------~~---~~~d~~~~~~~g~~~g~gGl~sTa~Dlakf~~~lL~~G~~~g~~-------------- 324 (432)
T PRK03642 271 PNIRTNTL---------WG---QVHDEKAFYSMGGVSGHAGLFSNTGDMAVLMQVMLNGGGYGNVQ-------------- 324 (432)
T ss_pred cccccCce---------ee---eecCcchhhhcCCcccccccccCHHHHHHHHHHHHhcCCcCCcc--------------
Confidence 00000000 00 00000111 1234578899999999999999999999988764
Q ss_pred CCCCCccccccccchhHHHHHHHhhccCCCCCCcccccCCCCCccccccCcchhhhhhhcccCCCCCCCccCCCCCCCCC
Q 002039 776 PKFPSHETSKKQKGTKKELLAALKNKTNNSEHGHKYTKDLEGGSHIRTASGDTYARLINIETSSSNTSTTDSISNTDEPQ 855 (977)
Q Consensus 776 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 855 (977)
=++++++++|.. + .
T Consensus 325 -------------lls~~~v~~~~~----------------------------------~-----------~-------- 338 (432)
T PRK03642 325 -------------LFDAETVKMFTT----------------------------------S-----------S-------- 338 (432)
T ss_pred -------------ccCHHHHHHHhc----------------------------------C-----------C--------
Confidence 123345554410 0 0
Q ss_pred CcccccccCCCcccccccCCCCCCCCCCCCCccccceeecCCC--------CCCccccccCCccCcceeeecCCCeEEEE
Q 002039 856 SSNVRKIFNNPRIHDAFLGVGDYGDLALPNGRFGLGFKRYNTR--------DGSYIGFGHSGMGGSTGFCDVNNRFAIAV 927 (977)
Q Consensus 856 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~yGlG~~~~~~~--------~~~~~~~gH~G~~G~~~~~~P~~~~~ivv 927 (977)
..+..||+||++.... ..+...|||+|.+|+.+|++|+.+++||+
T Consensus 339 ---------------------------~~~~~yGlGw~~~~~~~~~~~~g~~~~~~~~gh~G~~G~~~~vdPe~~l~ivi 391 (432)
T PRK03642 339 ---------------------------KEDATFGLGWRVNGNASMTPTFGTLASPQTYGHTGWTGTVTVIDPVNHMAIVM 391 (432)
T ss_pred ---------------------------CCCCccccccCcCCCCccccccccCCCCcccccCCccceEEEEecCCCEEEEE
Confidence 0123799999875321 12345799999999999999999999999
Q ss_pred EeccCC
Q 002039 928 TLNKMS 933 (977)
Q Consensus 928 l~N~~~ 933 (977)
++|...
T Consensus 392 ltN~~~ 397 (432)
T PRK03642 392 LSNKPH 397 (432)
T ss_pred ecCCcC
Confidence 999964
No 8
>KOG1236 consensus Predicted unusual protein kinase [General function prediction only]
Probab=100.00 E-value=4.7e-45 Score=392.99 Aligned_cols=373 Identities=20% Similarity=0.293 Sum_probs=310.6
Q ss_pred HHHHHHHHHhcChHHHHHHHHHhcCCCCCCHHHHHHHHHHHhCCCCCCHHHHHHHHHHHhCC-ChhhcccccCccccccc
Q 002039 51 AKRVLNLIIKLEGLWVKLGQYLSTRADVLPEPYISLLKQLQDSLPPRPVQEVSQTIEREFGE-SMGGMFMDFVETPLATA 129 (977)
Q Consensus 51 a~~l~~~l~~lgg~~iK~GQ~ls~r~dllp~~~~~~L~~Lqd~~p~~~~~~v~~~l~~elg~-~~~~~f~~~d~~piasa 129 (977)
-+-|+.+++..||+|||+|||.|||.|+|++.+|..|++|+.+++|++|...++.+.+++|. .++++|.+|++.|||+|
T Consensus 121 ~~~L~kaLE~aGPtFIKLGQWAsTR~DlFs~afC~qLSKLHs~vt~Hs~a~T~k~l~qa~~~~~~~eiF~efn~~PIGsG 200 (565)
T KOG1236|consen 121 LRLLLKALETAGPTFIKLGQWASTRRDLFSKAFCAQLSKLHSNVTPHSFAFTKKKLRQAFGVKKIEEIFSEFNREPIGSG 200 (565)
T ss_pred HHHHHHHHHhcCCceEEecccccccccccCHHHHHHHHHHhccCCCCchHHHHHHHHHHHCcCcHHHHHHhcCCcccccc
Confidence 35789999999999999999999999999999999999999999999999999999999997 99999999999999999
Q ss_pred cccEEEEEEec-------C---------CCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhC--CCCCCchhHHHHhhh
Q 002039 130 SIAQVHRATLV-------D---------GRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAE--PQYDFNPIIDEWCKE 191 (977)
Q Consensus 130 SigqV~~A~l~-------~---------G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~--~~~~~~~~~~e~~~~ 191 (977)
||||||+|+++ + .+.|||||.||++++++..|+.+|+..++.+.+.+ ..+++...++.|.-.
T Consensus 201 ~IAQVY~atl~~a~lekd~~~~~~~~~~tq~~AiKv~Hp~V~~~ir~Dl~Il~f~Akl~~~vP~l~wL~l~~~vkqF~v~ 280 (565)
T KOG1236|consen 201 CIAQVYRATLKTAYLEKDSGKEYVQKLGTQSCAIKVLHPNVEKQIRLDLGILGFGAKLINNVPDLSWLSLPLEVKQFSVG 280 (565)
T ss_pred hhhhhhhhhhhHHHhhcccchhhhcCCccceeeeeccCccHHHHHHHHHHHHhhhhhhhhhcCccccccCcchHHHHHHH
Confidence 99999999863 1 36799999999999999999999999888877653 335778889999999
Q ss_pred cccccCcHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeee--cCCceEEeeccCCCCCCChHHHHhcCC--CH
Q 002039 192 APKELDFNSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ--SSETVLILEFMDGIRLNDCESLEAFGV--NK 267 (977)
Q Consensus 192 l~~Eld~~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~--~~~~vLVmE~i~G~~L~~~~~~~~~~~--~~ 267 (977)
+..++|.++||.|+.+|..+|. +...|.+|.++. .++.||+-+|.+|.++........ +. -.
T Consensus 281 ln~QvdL~~EA~hL~rF~~NF~-------------~s~~V~fP~P~~~~~~~~vl~E~~~~Gl~v~~~v~~~~-~pe~l~ 346 (565)
T KOG1236|consen 281 LNAQVDLRQEALHLPRFTNNFS-------------GSKKVLFPKPIAPLHTDLVLVETYERGLSVLRFVKWKS-QPEALV 346 (565)
T ss_pred HHhhcchhhhhhhhHHHHHhcc-------------cceeecCCcccccccccceeeeeccccccHHhhhhccc-ChHHHH
Confidence 9999999999999999999987 345688899886 899999999999999987754222 22 14
Q ss_pred HHHHHHHHHHHHHHHHhcCccccCCCCCCeEEccCCC-----------------------------------------Cc
Q 002039 268 QKVVEEITRAYAHQIYVDGFFNGDPHPGNFLVSKDPP-----------------------------------------HR 306 (977)
Q Consensus 268 ~~l~~~l~~~~l~~i~~~G~~H~D~hPgNIlv~~~~~-----------------------------------------g~ 306 (977)
++++...++++++|++.++|+|+|+|||||++...++ -+
T Consensus 347 kkva~lg~~AllkMl~vDNFvHaDlHPGNVlirf~~t~~~~~~~~~~e~~~~i~~~L~~~~~e~~d~~~~~~~~~~~~P~ 426 (565)
T KOG1236|consen 347 KKVAKLGVNALLKMLIVDNFVHADLHPGNVLIRFNKTEDNLRGVHKAEKASAIKRGLEWFRSEVRDARFTDSPDLEYEPT 426 (565)
T ss_pred HHHHHHHHHHHHHHHHhhcceecccCCCcEEEEecCCCccccccccchhhhHHhhhhhhhhhhhhhhhhhccccccCCCe
Confidence 5678888899999999999999999999999975433 46
Q ss_pred eEEEecccccccCHHHHHHHHHHHHHHHcCCHHHHHHHHHHcCcc-cCCCcHHHHHHHHHHHHhccCChhhhHHHHHhHH
Q 002039 307 PILLDFGLTKKLSSSMKQALAKMFFAAAEGDHVALLSAFAEMGLR-LRLDVPEQAMEVSTLFFRTSAPANEAFETVKNLS 385 (977)
Q Consensus 307 i~LiDFG~~~~l~~~~r~~~~~l~~a~~~~d~~~~~~~~~~~g~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 385 (977)
++++|-|++..++++.+.++..+|.|++..|.-.+.+.+.+.... ...|.+.++..+.+++..... . ..++.+
T Consensus 427 lvflDtGiv~kLs~qn~~N~l~lF~av~~~~Gy~ag~lml~~Sr~q~~~d~e~F~~kvEklv~~~~s-t----~sl~tl- 500 (565)
T KOG1236|consen 427 LVFLDTGIVTKLSHQNQMNLLSLFRAVARFDGYDAGELMLERSRQQQCIDPERFARKVEKLVLKARS-T----KSLRTL- 500 (565)
T ss_pred EEEecchhhhccChhhHHHHHHHHHHHHHhcchhHHHHHHhhcccccCCCHHHHHHHHHHHHHHhhh-h----cccCcC-
Confidence 899999999999999999999999999999988888888887654 345666677777776554320 0 011111
Q ss_pred HHHHhhHHHHHHHHHHhHHHHhhcCCCCCCCchHHHHHHHHHHHHHhhhccCccchhhcccchhHHHH
Q 002039 386 EQRAKNLKVIQEKMKLNQKEVKRFNPVDAFPGDIVIFSRVLNLLRGLSSTMNVRIVYLDIMRPFAEYV 453 (977)
Q Consensus 386 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~~~R~~~~leg~~~~L~p~~~~~~~~~~y~~~~ 453 (977)
.+...++|++.+.. .|+ +++..++.-++-++.+|||.+++|||+.|+.....+|+...
T Consensus 501 ----~i~~ll~em~tmvr----eH~--V~ids~f~tvvlsilvlEG~gRqLdP~lDl~~~~~~~l~~~ 558 (565)
T KOG1236|consen 501 ----NIGDLLSEMFTMVR----EHH--VRIDSNFTTVVLSILVLEGFGRQLDPDLDLFQLRTFLLNVA 558 (565)
T ss_pred ----cHHHHHHHHHHHHH----Hhh--eeeccchHHHHHHHHHHhhhccccCCCcchhhhHHHHHHHH
Confidence 13344556555533 333 68999999999999999999999999999998544444443
No 9
>PRK13128 D-aminopeptidase; Reviewed
Probab=100.00 E-value=5e-44 Score=418.84 Aligned_cols=237 Identities=19% Similarity=0.207 Sum_probs=187.6
Q ss_pred HHHHHHHHHHhccCCCccceEEEEEecCeeEEEeeccccCCCCCCCCCCCCcceeecchHHHHHHHHHHHHHCCCcCcCC
Q 002039 479 EAKLRDFLVELGNDGKILGIQVCAYKDGEVIIDTSAGMLGRYDPRPVQPDSLFPVFSVTKGITAGMLHWLVDNGKLKLEE 558 (977)
Q Consensus 479 ~~~l~~~l~~~~~~~~~pG~svaVv~~g~~v~~~~~G~~~~~~~~~~t~~T~f~i~SiTK~~ta~~v~~lv~~G~l~ld~ 558 (977)
.+.++++++++++++.+||++++|+++|+++++++||+++...+.|++++|+|+|||+||+|||+++++|+++|+ +||+
T Consensus 6 ~~~l~~~v~~l~~~~~~Pg~avaVv~~G~iv~~~~~G~ad~~~~~p~t~dT~f~IaSiTK~fTa~~il~Lveeg~-~LDd 84 (518)
T PRK13128 6 LPTLEAFVHAIPQNYKGPGGAVAVVKDGEVVLRHAWGFADLARRKAMTPETRMPICSVSKQFTCAVLLDCIGEPE-MLDA 84 (518)
T ss_pred HHHHHHHHHHHHHhcCCCcEEEEEEECCEEEEEEeEEeeccccCCCCCCCCeEechhhHHHHHHHHHHHHHhcCC-CCCC
Confidence 467888888888889999999999999999999999999999999999999999999999999999999999985 9999
Q ss_pred chhhhccccccCCCCCCcHHHHhcCcCCCCCCcCCCC--CCCCcCCCCHHHHHHHHHcc-CCCCCCCCceecccCcHHHH
Q 002039 559 NIANIWPEFKSNGKDLIKVHHVLNHTSGLHNVSVDLS--SENPLLICDWDECLNRIALS-APETEPGQEQLYHYLSFGWL 635 (977)
Q Consensus 559 ~v~~ylP~~~~~~~~~iTir~LLsHtSGl~~~~~~~~--~~~~~~~~~~~~~~~~l~~~-~~~~~pG~~~~Ysn~~~~~l 635 (977)
||.+|||+|.. .+|||+|||+|||||+++..... ..++......++..+.+... ++.++||+.|.|||.||. |
T Consensus 85 pv~~yLPe~~~---~~iTvr~LLtHTSGl~d~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~PGt~~~YSN~gy~-L 160 (518)
T PRK13128 85 ALAAYLDQFED---PRPAVRDLCNNQSGLRDYWALTVLCGAAPEGIFLPDQAQNLLRRLKTTHFAPGTHYSYCNGNFR-I 160 (518)
T ss_pred cHHHhcCCCCC---CCChHHHHhhCCCCCCccchhhhhcccccccCCCHHHHHHHHHhhccccCCCCCeeEEeCHHHH-H
Confidence 99999999975 35999999999999997532211 11222234556666666553 568999999999999999 9
Q ss_pred HHHHHHHHhCCCHHHHHHHHcccccCCCCccCCCCCCCcccCcceecccCCccccccCCCCCCCCCCCCCCCcchhhhhh
Q 002039 636 CGGIIERASGKKFQEILEEGIIQPLSIDGELYIGIPPGVESRLASLTIDTDDLNKVSGINNRPDLRLPSSFQPDKISQLA 715 (977)
Q Consensus 636 lg~iiE~vtG~~~~~~l~~~if~PLGm~~t~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~p~~~~p~~~~~~~~~~~~ 715 (977)
||.|||+++|++|++|++++||+||||++|++.. .....+.+.+|.........+
T Consensus 161 Lg~iIE~vtG~~~~~~l~~~If~PLGM~~T~~~~--~~~~~~~a~Gy~~~~~~~~~p----------------------- 215 (518)
T PRK13128 161 LADLIEQHTGRSLADLLAERIFAPAGMKTAELIP--DTALFDECTGYEGDTVRGFLP----------------------- 215 (518)
T ss_pred HHHHHHHHhCCCHHHHHHHhhhcccCCCccccCc--cccccccccccccCCCCCccc-----------------------
Confidence 9999999999999999999999999999997642 222233344443211000000
Q ss_pred hcccccccchhccccccCccceecCHHHHHHHHHHHHcC
Q 002039 716 AITPAVFNMLNIRRAIIPAANGHCSARALARYYAALADG 754 (977)
Q Consensus 716 ~~~~~~~~~~~~~~~~~~agG~~sTa~Dlar~~~~ll~~ 754 (977)
..+. ....++||++||+.||+||+++++++
T Consensus 216 -----~~~~----~~~~g~gGl~STa~Dma~~~~~l~~~ 245 (518)
T PRK13128 216 -----AINR----IHWLGDAGICASLDDMIAWEQFIDRT 245 (518)
T ss_pred -----Cccc----ccccCCcceEcCHHHHHHHHHHHHcc
Confidence 0011 11347789999999999999998764
No 10
>PF00144 Beta-lactamase: Beta-lactamase; InterPro: IPR001466 This entry represents the serine beta-lactamase-like superfamily. It is a group of diverse group of sequences that includes D-alanyl-D-alanine carboxypeptidase B, aminopeptidase (DmpB), alkaline D-peptidase, animal D-Ala-D-Ala carboxypeptidase homologues and the class A and C beta-lactamases and eukaryotic beta-lactamase homologues which are variously described as: transesterases, non-ribosomal peptide synthetases and hypothetical proteins. Many are serine peptidases belonging to MEROPS peptidase families S11 (D-Ala-D-Ala carboxypeptidase A family) and S12 (D-Ala-D-Ala carboxypeptidase B family, clan SE). The beta-lactamases are classified as both S11 and S12 non-peptidase homologues; these either have been found experimentally to be without peptidase activity, or lack amino acid residues that are believed to be essential for the catalytic activity. Beta-lactamase catalyses the opening and hydrolysis of the beta-lactam ring of beta-lactam antibiotics such as penicillins and cephalosporins []. There are four groups, classed A, B, C and D according to sequence, substrate specificity, and kinetic behaviour: class A (penicillinase-type) is the most common []. The genes for class A beta-lactamases are widely distributed in bacteria, frequently located on transmissible plasmids in Gram-negative organisms, although an equivalent chromosomal gene has been found in a few species []. Class A, C and D beta-lactamases are serine-utilising hydrolases - class B enzymes utilise a catalytic zinc centre instead. The 3 classes of serine beta-lactamase are evolutionarily related and belong to a superfamily that also includes DD-peptidases and other penicillin-binding proteins []. All these proteins contain an S-x-x-K motif, the Ser being the active site residue. Although clearly related, however, the sequences of the 3 classes of serine beta-lactamases vary considerably outside the active site. ; PDB: 1CI8_A 1CI9_B 1PW8_A 1PW1_A 1CEF_A 3PTE_A 1MPL_A 1PWG_A 1CEG_A 1IKG_A ....
Probab=100.00 E-value=3.9e-43 Score=395.99 Aligned_cols=244 Identities=28% Similarity=0.425 Sum_probs=195.8
Q ss_pred HHHHHHHhccCCCccceEEEEEecCeeEEEeeccccCCCCCCCCCCCCcceeecchHHHHHHHHHHHHHCCCcCcCCchh
Q 002039 482 LRDFLVELGNDGKILGIQVCAYKDGEVIIDTSAGMLGRYDPRPVQPDSLFPVFSVTKGITAGMLHWLVDNGKLKLEENIA 561 (977)
Q Consensus 482 l~~~l~~~~~~~~~pG~svaVv~~g~~v~~~~~G~~~~~~~~~~t~~T~f~i~SiTK~~ta~~v~~lv~~G~l~ld~~v~ 561 (977)
+++.+++.++++.+||++++|+++|+++++.++|+++...+.+++++|+|+++|+||+||++++++|+++|+|+||+||.
T Consensus 1 ~~~~i~~~~~~~~~~g~a~~v~~~g~~~~~~~~G~~~~~~~~~~~~~t~~~i~SvsK~~ta~~v~~l~~~G~l~ld~~v~ 80 (329)
T PF00144_consen 1 IDRIIEQFMERYGIPGAAVAVIHNGKIVYEQYYGYADKQTGKPMTPDTVFRIGSVSKSFTATAVMQLIDEGKLDLDDPVS 80 (329)
T ss_dssp HHHHHHHHHHHTTESEEEEEEEETTEEEEEEEEEEEETTTTEEESTTSBEEEGGGHHHHHHHHHHHHHHTTSSGTTSBGG
T ss_pred ChHHHHHHHHhCCCcEEEEEEEECCEEEEEEEEeecccccCCCCCccceeeccCCcceeehhhhhhhhccccccccCccc
Confidence 46788888889999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhccccccCCCCCCcHHHHhcCcCCCCCCcCCCCCCCCcCCCCHHHHHHHHHccCCCCCCCCceecccCcHHHHHHHHHH
Q 002039 562 NIWPEFKSNGKDLIKVHHVLNHTSGLHNVSVDLSSENPLLICDWDECLNRIALSAPETEPGQEQLYHYLSFGWLCGGIIE 641 (977)
Q Consensus 562 ~ylP~~~~~~~~~iTir~LLsHtSGl~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~pG~~~~Ysn~~~~~llg~iiE 641 (977)
+|||++.....++|||+|||+||||++++......... ....+++++.+...++.++||+.|.|||.+|. |||.|||
T Consensus 81 ~ylp~~~~~~~~~iTi~~LL~htSGl~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~pg~~~~Ysn~~~~-ll~~ile 157 (329)
T PF00144_consen 81 KYLPEFPDPGKEKITIRDLLTHTSGLPDYEASDELFGD--KPFWDELLQYLANLPLNFPPGTQFAYSNTNYQ-LLGEILE 157 (329)
T ss_dssp GTTTTGTTCGGTTEBHHHHHTTHSSHSSSSHTTTHTSH--HHHHHHHHHHHHHSCSSSSTTSEEE--HHHHH-HHHHHHH
T ss_pred ccccccccccccCcccceeceeecCCCccccccccccc--ccchhHHHhhhhcccccccccccccccCcchh-hhhHHHH
Confidence 99998777777789999999999999986332221110 01126899999999999999999999999999 9999999
Q ss_pred HHhCCCHHHHHHHHcccccCCCCccCCCCCCCcccCcceecccCCccccccCCCCCCCCCCCCCCCcchhhhhhhccccc
Q 002039 642 RASGKKFQEILEEGIIQPLSIDGELYIGIPPGVESRLASLTIDTDDLNKVSGINNRPDLRLPSSFQPDKISQLAAITPAV 721 (977)
Q Consensus 642 ~vtG~~~~~~l~~~if~PLGm~~t~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~p~~~~p~~~~~~~~~~~~~~~~~~ 721 (977)
+++|++|+++++++||+||||++|.|.. +.......+..+.......... .
T Consensus 158 ~~tg~~~~~~~~~~i~~plgm~~t~~~~-~~~~~~~~~~~~~~~~~~~~~~----------------------------~ 208 (329)
T PF00144_consen 158 RVTGKSFEELLQENIFQPLGMKHTGFGP-PDAWPPRDAIGYYGNGDQASSP----------------------------P 208 (329)
T ss_dssp HHHTSHHHHHHHHHTTTTTTSTTEESSB-GGGGGGGBEEEEEETTEEECEE----------------------------S
T ss_pred HhccchhHHHHHHHHHHHhhcccccccc-cccccccccccccccccccccc----------------------------c
Confidence 9999999999999999999999997643 3333333343332222111111 0
Q ss_pred ccchhccccccCccceecCHHHHHHHHHHHHcCCCCCCC
Q 002039 722 FNMLNIRRAIIPAANGHCSARALARYYAALADGGVVPPP 760 (977)
Q Consensus 722 ~~~~~~~~~~~~agG~~sTa~Dlar~~~~ll~~g~~~~~ 760 (977)
..... ...++||+++|++||+||++++++++.+...
T Consensus 209 ~~~~~---~~~~aggl~st~~Dlak~~~~~~~~~~~~~~ 244 (329)
T PF00144_consen 209 GYNPN---PYYGAGGLFSTARDLAKFGQLLLNGGLILSP 244 (329)
T ss_dssp CTTHH---HHTTTTTEEECHHHHHHHHHHHHHTGGSSCH
T ss_pred ccccc---cccccCccchhhHHHHHHHHHHhCCCccchh
Confidence 00011 1118999999999999999888888776655
No 11
>COG1680 AmpC Beta-lactamase class C and other penicillin binding proteins [Defense mechanisms]
Probab=100.00 E-value=9.3e-37 Score=352.59 Aligned_cols=250 Identities=28% Similarity=0.417 Sum_probs=182.4
Q ss_pred HHHHHHHHhccCCCc--cceEEEEEecCeeEEEeeccccCCCCCCCCCCCCcceeecchHHHHHHHHHHHHHCCCcCcCC
Q 002039 481 KLRDFLVELGNDGKI--LGIQVCAYKDGEVIIDTSAGMLGRYDPRPVQPDSLFPVFSVTKGITAGMLHWLVDNGKLKLEE 558 (977)
Q Consensus 481 ~l~~~l~~~~~~~~~--pG~svaVv~~g~~v~~~~~G~~~~~~~~~~t~~T~f~i~SiTK~~ta~~v~~lv~~G~l~ld~ 558 (977)
.++..++..+++... +|++++|+++|++++.+.+|+++...+.+.+++|+|+|+|+||+|||+++++|||+|+|+|||
T Consensus 37 ~~~~~~~~~~~~~~~~~~g~a~av~~~g~~~~~~~~g~~~~~~~~~~~~~t~f~i~S~TK~~ta~~i~~LveeG~l~ldd 116 (390)
T COG1680 37 RLDRLADAIMEEYGAPGPGLALAVVLDGKTVVAKGYGVADEGYGGPVTPPTVFRIASVTKSFTATLLGKLVEEGKLDLDD 116 (390)
T ss_pred hhhhHHHHHHHhcccCCCceEEEEEECCEEEEEeccccccccccCCCCCCceeeehhhhHHHHHHHHHHHHHcCCCCCCc
Confidence 334444444443444 599999999999988899999999999999999999999999999999999999999999999
Q ss_pred chhhhcccc---ccCCCCCCcHHHHhcCcCCCCCCcCCCCCCCCcCCCCHHHHHHHHHccC--CCCCCCCceecccCcHH
Q 002039 559 NIANIWPEF---KSNGKDLIKVHHVLNHTSGLHNVSVDLSSENPLLICDWDECLNRIALSA--PETEPGQEQLYHYLSFG 633 (977)
Q Consensus 559 ~v~~ylP~~---~~~~~~~iTir~LLsHtSGl~~~~~~~~~~~~~~~~~~~~~~~~l~~~~--~~~~pG~~~~Ysn~~~~ 633 (977)
||++|||+. .... .+|||+|||+||||++...............+.+.+.+.+...+ ...+||+.+.|||.+|.
T Consensus 117 pV~~ylP~~~~~~~~~-~~iTi~~LL~htSGl~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~pG~~~~Ysn~~~~ 195 (390)
T COG1680 117 PVSKYLPEGKDPATGG-APITLRDLLTHTSGLPFPEDYAYAVPKRLVQDQEAALEYLASLPPELAPPPGTAFAYSNSNYG 195 (390)
T ss_pred hHHHhCCCccCCcCCc-cceeHHHhhhcccCCCCcccccccccchhhhhHHHHHHHHHhccccccCCCCcceeeecccHH
Confidence 999999962 2233 58999999999999997222111111112234455566777776 46778999999999999
Q ss_pred HHHHHHHHHHhCCCHHHHHHHHcccccCCCCccCCCCCCCcccCcceecccCCccccccCCCCCCCCCCCCCCCcchhhh
Q 002039 634 WLCGGIIERASGKKFQEILEEGIIQPLSIDGELYIGIPPGVESRLASLTIDTDDLNKVSGINNRPDLRLPSSFQPDKISQ 713 (977)
Q Consensus 634 ~llg~iiE~vtG~~~~~~l~~~if~PLGm~~t~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~p~~~~p~~~~~~~~~~ 713 (977)
+||.|||+++|++|+++++++||+||||++|.+.. ++....+.+..+....... .....|.
T Consensus 196 -lLg~ive~v~G~~~~~~~~~~i~~PLGm~~t~~~~-~~~~~~~~~~~~~~~~~~~---~~~~~~~-------------- 256 (390)
T COG1680 196 -LLGAILERVTGKPLEELLRERIFEPLGMTSTGFGP-PPAPQARLAAGLAPAVGGG---GEVDDPG-------------- 256 (390)
T ss_pred -HHHHHHHHhcCCCHHHHHHHHhhcccCCCcccccc-ChhhhcccccccccccccC---CccccCc--------------
Confidence 99999999999999999999999999999996643 3333322222211000000 0000000
Q ss_pred hhhcccccccchhccccccCccceecCHHHHHHHHHHHHcCCCCCCC
Q 002039 714 LAAITPAVFNMLNIRRAIIPAANGHCSARALARYYAALADGGVVPPP 760 (977)
Q Consensus 714 ~~~~~~~~~~~~~~~~~~~~agG~~sTa~Dlar~~~~ll~~g~~~~~ 760 (977)
...+.....+++|+.+|++||++|++++++++.+.+.
T Consensus 257 ----------~~~~~~~~~~~~gl~~t~~d~~~~~~~~l~~~~~~~~ 293 (390)
T COG1680 257 ----------TFGLGSALAGAGGLFSTARDMARFGQALLNGGVLLGR 293 (390)
T ss_pred ----------cccccccCCCCCceecccchHHHHHHHHhcCCCccch
Confidence 0001111346799999999999999999999866655
No 12
>KOG1234 consensus ABC (ATP binding cassette) 1 protein [General function prediction only]
Probab=100.00 E-value=1.1e-36 Score=312.66 Aligned_cols=350 Identities=22% Similarity=0.305 Sum_probs=287.2
Q ss_pred HhcCC-CCCCHHHHHHHHHHHhCCCCCCHHHHHHHHHHHhCCChhhcccccCccccccccccEEEEEEecCCCEEEEEEe
Q 002039 72 LSTRA-DVLPEPYISLLKQLQDSLPPRPVQEVSQTIEREFGESMGGMFMDFVETPLATASIAQVHRATLVDGRQVVVKVQ 150 (977)
Q Consensus 72 ls~r~-dllp~~~~~~L~~Lqd~~p~~~~~~v~~~l~~elg~~~~~~f~~~d~~piasaSigqV~~A~l~~G~~VAVKv~ 150 (977)
||.+. .++|+...+.|++.++++..||..++.+++..++|.+|.+.|++||+.|.+++||||||+|++++|..||||||
T Consensus 2 LSiQD~~ll~p~l~qi~erVrqsAd~MP~~Ql~~vm~~~lG~nW~~Kf~~fd~~P~AaASIGQVHrArl~~g~eVavKiQ 81 (363)
T KOG1234|consen 2 LSIQDGSLLPPTLGQILERVRQSADFMPPKQLEPVMWGELGGNWAQKFSSFDDGPFAAASIGQVHRARLADGPEVAVKIQ 81 (363)
T ss_pred cccccCCccCHHHHHHHHHhcCccccCChhhhhHHHhhhhchhHHHHHHhhccCccccccHHHHHHHHhcCCCeeeeecC
Confidence 34443 57899999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCcHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCC
Q 002039 151 HQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEAENTRIVSANLGCKNKHEDSNKKPAYEVD 230 (977)
Q Consensus 151 ~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (977)
+||+.+.+..|+..+.+++..-..++..+-++..++-.++++..|+||.+||....+|+..+. +.+.
T Consensus 82 YPGva~sI~SD~~nl~~lLn~s~llPkGLFLd~~i~~ArkEL~~ECDYqrEA~~~~kFr~LLs-------------~~p~ 148 (363)
T KOG1234|consen 82 YPGVARSIDSDANNLSRLLNFSGLLPKGLFLDVLIEVARKELKWECDYQREAASALKFRPLLS-------------DDPN 148 (363)
T ss_pred CCchhhhccCcHHHHHHHHhhcccccccccHHHHHHHHHHhcccccchHHHHHHHhhhHHHhc-------------CCCC
Confidence 999999999999999999887666666777888899999999999999999999999998775 5778
Q ss_pred eEeceeee--cCCceEEeeccCCCCCCChHHHHhcCCCHHHHHHHHHHHHHHHHHhcCccccCCCCCCeEEccCCCCceE
Q 002039 231 VLIPEVIQ--SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAYAHQIYVDGFFNGDPHPGNFLVSKDPPHRPI 308 (977)
Q Consensus 231 v~vP~v~~--~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~ 308 (977)
++||.|+. |+.++|+||++.|.+|.....+ .+..++.|...+++.+++.|++..|+..||+=+|++++.. +.+|.
T Consensus 149 f~VP~Vv~Elct~rvlt~el~~G~pid~~~~~--sQ~~rn~i~~~~l~lcLrEif~f~fMQTDPNWsNFly~~~-tk~i~ 225 (363)
T KOG1234|consen 149 FYVPRVVDELCTVRVLTLELGQGLPIDKTAKL--SQETRNYIGYKLLELCLREIFEFRFMQTDPNWSNFLYNGR-TKKIE 225 (363)
T ss_pred cchhHHHHhhccchhhhhhhhcCccchhhhcc--cHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCHHHhccCCC-cceEE
Confidence 99999996 9999999999999999876332 2234678999999999999999999999999999999865 57899
Q ss_pred EEecccccccCHHHHHHHHHHHHHHHcCCHHHHHHHHHHcCcccCCCcHHHHHH-HHHHHHhccCChhhhHHHHHhHHHH
Q 002039 309 LLDFGLTKKLSSSMKQALAKMFFAAAEGDHVALLSAFAEMGLRLRLDVPEQAME-VSTLFFRTSAPANEAFETVKNLSEQ 387 (977)
Q Consensus 309 LiDFG~~~~l~~~~r~~~~~l~~a~~~~d~~~~~~~~~~~g~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 387 (977)
|+|||.++.+++++...|++++.|+..+|.+.+.+.-+++|+...........+ +..++. -..|.... ..+.+.
T Consensus 226 LlDFGAsr~y~~~F~d~Y~~~~~aaa~~dr~~v~e~S~~lgfLtg~Es~~m~DAHv~sv~i-lgepfa~~----~pydF~ 300 (363)
T KOG1234|consen 226 LLDFGASREYGEKFIDKYIRLLKAAADRDREGVIEMSRELGFLTGYESKVMEDAHVESVMI-LGEPFASD----GPYDFG 300 (363)
T ss_pred EEeccccccccHHHHHHHHHHHHHHHhcchHHHHHHHHHhcccccchHHHHHHHhhhHhhh-ccccccCC----CCcCcC
Confidence 999999999999999999999999999999999999999999643221111111 112111 11111100 112222
Q ss_pred HHhhHHHHHHHHHHhHHHHhhcCCCCCCCchHHHHHHHHHHHHHhhhccCccchhhcccc
Q 002039 388 RAKNLKVIQEKMKLNQKEVKRFNPVDAFPGDIVIFSRVLNLLRGLSSTMNVRIVYLDIMR 447 (977)
Q Consensus 388 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~~~R~~~~leg~~~~L~p~~~~~~~~~ 447 (977)
.......++..+..+ .+++ +...|.|...+.|.+....=+|..|++.|...+...
T Consensus 301 ~q~~t~ri~~lipvm----L~hR-L~pPPeEtYsLHRklsG~fL~cakl~A~v~C~~lf~ 355 (363)
T KOG1234|consen 301 DQTVTDRIQNLIPVM----LRHR-LCPPPEETYSLHRKLSGAFLLCAKLGATVPCRDLFK 355 (363)
T ss_pred ccHHHHHHHhhhHHH----Hhcc-CCCCcHHHHHHHHHhhhHHHHHHHhcCCCcHHHHHH
Confidence 222334555555553 3334 246788899999999999999999999998776644
No 13
>PF03109 ABC1: ABC1 family; InterPro: IPR004147 This entry includes ABC1 from yeast [] and AarF from Escherichia coli []. These proteins have a nuclear or mitochondrial subcellular location in eukaryotes. The exact molecular functions of these proteins is not clear, however yeast ABC1 suppresses a cytochrome b mRNA translation defect and is essential for the electron transfer in the bc 1 complex [] and E. coli AarF is required for ubiquinone production []. It has been suggested that members of the ABC1 family are novel chaperonins []. These proteins are unrelated to the ABC transporter proteins.
Probab=99.91 E-value=2.4e-25 Score=211.60 Aligned_cols=117 Identities=38% Similarity=0.574 Sum_probs=110.2
Q ss_pred HHhCCChhhcccccCccccccccccEEEEEEecCCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCC--CCCchhH
Q 002039 108 REFGESMGGMFMDFVETPLATASIAQVHRATLVDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQ--YDFNPII 185 (977)
Q Consensus 108 ~elg~~~~~~f~~~d~~piasaSigqV~~A~l~~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~--~~~~~~~ 185 (977)
++||.+++++|.+||++|+|||||||||+|++++|++||||||||++++.+..|+++++.++.++.+..+. +++..++
T Consensus 1 e~lG~~~~~~F~~fd~~PlasASiaQVh~a~l~~g~~VaVKV~rP~i~~~i~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~ 80 (119)
T PF03109_consen 1 EELGKPIDEIFDEFDPEPLASASIAQVHRARLKDGEEVAVKVQRPGIEEQIEADLRILRRLARLLERLPPFRRLDLEEIV 80 (119)
T ss_pred CCcCCCHHHHHHHCCcchhhheehhhheeeeecccchhhhhhcchHHHHHHHHHHHHHHHHHHHHHHcccccccCHHHHH
Confidence 47999999999999999999999999999999999999999999999999999999999999999987665 7899999
Q ss_pred HHHhhhcccccCcHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceee
Q 002039 186 DEWCKEAPKELDFNSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVI 237 (977)
Q Consensus 186 ~e~~~~l~~Eld~~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~ 237 (977)
+++.+.+.+|+||++|++|+++|+++|. +...++||+||
T Consensus 81 ~e~~~~l~~ElDf~~Ea~n~~~~~~~~~-------------~~~~v~vP~vy 119 (119)
T PF03109_consen 81 DEFRDSLLEELDFRREAANLERFRKNFA-------------DSPRVYVPKVY 119 (119)
T ss_pred HHHHHHHHHHhCHHHHHHHHHHHHHHhC-------------CCCCEecCCCC
Confidence 9999999999999999999999999987 34689999986
No 14
>cd05145 RIO1_like RIO kinase family; RIO1, RIO3 and similar proteins, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. In addition, RIO3 is present in multicellular eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle pro
Probab=99.80 E-value=3.2e-19 Score=185.17 Aligned_cols=182 Identities=18% Similarity=0.223 Sum_probs=119.1
Q ss_pred cccccccccEEEEEEecCCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCcHHHHH
Q 002039 124 TPLATASIAQVHRATLVDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEAE 203 (977)
Q Consensus 124 ~piasaSigqV~~A~l~~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea~ 203 (977)
.+||+||+|+||+|++.+|+.||||+.+++.... ..+.+.+.....+... ....+...+.. ..+..|.+
T Consensus 3 ~~ig~G~~~~Vy~a~~~~g~~vavKv~~~~~~~~-~~~~~~~~~~~~~~~~-~~~~~~~~~~~---------~~~~~E~~ 71 (190)
T cd05145 3 GCISTGKEANVYHARTGDGEELAVKIYKTSTLSF-KDRDKYIEGDPRFRSR-YSKSNPRKLVF---------AWAEKEFR 71 (190)
T ss_pred ceeecCCCcEEEEEEcCCCCEEEEEEEEcCcceE-eeHHHHhcCCcccccc-cccCCHHHHHH---------HHHHHHHH
Confidence 5899999999999998889999999999985421 1111111000000000 00001111111 12357888
Q ss_pred HHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeeecCCceEEeeccCCCCCCChHHHHhcCCCHHH---HHHHHHHHHHH
Q 002039 204 NTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQSSETVLILEFMDGIRLNDCESLEAFGVNKQK---VVEEITRAYAH 280 (977)
Q Consensus 204 n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~---l~~~l~~~~l~ 280 (977)
++.++.+ ..+.+|.++.+...+|||||++|..+... .+.....+... ++..++.. +.
T Consensus 72 ~l~~l~~------------------~~i~~p~~~~~~~~~lVmE~~~g~~~~~~-~l~~~~~~~~~~~~i~~~l~~~-l~ 131 (190)
T cd05145 72 NLKRLYE------------------AGVPVPEPILLKKNVLVMEFIGDDGSPAP-RLKDVPLEEEEAEELYEQVVEQ-MR 131 (190)
T ss_pred HHHHHHh------------------CCCCCceEEEecCCEEEEEEecCCCchhh-hhhhccCCHHHHHHHHHHHHHH-HH
Confidence 8888864 24677888776678999999999855432 12333444333 34444443 66
Q ss_pred HHHh-cCccccCCCCCCeEEccCCCCceEEEecccccccCHHHHHHHHHHHHHHHcCCHHHHHHHHH
Q 002039 281 QIYV-DGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSSSMKQALAKMFFAAAEGDHVALLSAFA 346 (977)
Q Consensus 281 ~i~~-~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~~~r~~~~~l~~a~~~~d~~~~~~~~~ 346 (977)
++|. .|++|+||||+|||++ + ++++|+|||+++.++.. ...++..+|++.+...|.
T Consensus 132 ~lH~~~givHrDlkP~NIll~-~--~~~~liDFG~a~~~~~~-------~~~~~~~~~~~~~~~~~~ 188 (190)
T cd05145 132 RLYQEAGLVHGDLSEYNILYH-D--GKPYIIDVSQAVELDHP-------NALEFLRRDIRNINRFFR 188 (190)
T ss_pred HHHHhCCEecCCCChhhEEEE-C--CCEEEEEcccceecCCC-------CHHHHHHHHHHHHHHHhh
Confidence 7787 9999999999999997 4 78999999999998764 445567788888877764
No 15
>cd05147 RIO1_euk RIO kinase family; eukaryotic RIO1, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. This subfamily is composed of RIO1 proteins from eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle progression and c
Probab=99.78 E-value=1.1e-18 Score=180.94 Aligned_cols=182 Identities=16% Similarity=0.185 Sum_probs=115.9
Q ss_pred cccccccccEEEEEEecCCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCcHHHHH
Q 002039 124 TPLATASIAQVHRATLVDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEAE 203 (977)
Q Consensus 124 ~piasaSigqV~~A~l~~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea~ 203 (977)
..||+||+|+||+|++++|++||||+++++.......| ..+....++.. .....+...++.++. .+|.+
T Consensus 3 ~~ig~G~~~~Vy~a~~~~g~~vAvKv~~~~~~~~~~~~-~~~~~~~~~~~-~~~~~~~~~~~~~~~---------~~E~~ 71 (190)
T cd05147 3 GCISTGKEANVYHATTANGEERAIKIYKTSILVFKDRD-RYVSGEFRFRH-GYCKSNPRKMVRTWA---------EKEMR 71 (190)
T ss_pred CccccccceEEEEEECCCCCEEEEEEEEecccccccHH-HhhcCCchhhc-cccCCCHHHHHHHHH---------HHHHH
Confidence 46999999999999988999999999998754322111 11000000000 001112222222222 46888
Q ss_pred HHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeeecCCceEEeeccCCCCCCChHHHHhcCCCHHHHHHHHHHH--HHHH
Q 002039 204 NTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQSSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRA--YAHQ 281 (977)
Q Consensus 204 n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~--~l~~ 281 (977)
++.++.+. .+.+|.++.+...+|||||++|..+.... +....++...+...+.++ .+.+
T Consensus 72 ~l~~l~~~------------------~v~~p~~~~~~~~~iVmE~i~g~~l~~~~-~~~~~~~~~~~~~i~~qi~~~L~~ 132 (190)
T cd05147 72 NLKRLVTA------------------GIPCPEPILLKSHVLVMEFIGDDGWAAPR-LKDAPLSESKARELYLQVIQIMRI 132 (190)
T ss_pred HHHHHHHC------------------CCCCCcEEEecCCEEEEEEeCCCCCcchh-hhcCCCCHHHHHHHHHHHHHHHHH
Confidence 88888641 34456666666779999999997665431 233456666666666553 3777
Q ss_pred H-HhcCccccCCCCCCeEEccCCCCceEEEecccccccCHHHHHHHHHHHHHHHcCCHHHHHHHH
Q 002039 282 I-YVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSSSMKQALAKMFFAAAEGDHVALLSAF 345 (977)
Q Consensus 282 i-~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~~~r~~~~~l~~a~~~~d~~~~~~~~ 345 (977)
+ |..|++||||||+|||++ + ++++|||||++.......- ..++.+|.+.+.+.|
T Consensus 133 l~H~~giiHrDlkP~NIli~-~--~~v~LiDFG~a~~~~~~~~-------~~~~~~d~~~~~~~f 187 (190)
T cd05147 133 LYQDCRLVHADLSEYNLLYH-D--GKLYIIDVSQSVEHDHPHA-------LEFLRMDCVNVNDFF 187 (190)
T ss_pred HHHhCCcccCCCCHHHEEEE-C--CcEEEEEccccccCCCcCH-------HHHHHHHHHHHHHHh
Confidence 7 689999999999999997 2 6899999999986644322 223455666555554
No 16
>smart00090 RIO RIO-like kinase.
Probab=99.69 E-value=2.3e-16 Score=169.18 Aligned_cols=183 Identities=21% Similarity=0.278 Sum_probs=124.8
Q ss_pred cccccccccEEEEEE--ecCCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCC--CchhHHHHhhhcccccCcH
Q 002039 124 TPLATASIAQVHRAT--LVDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYD--FNPIIDEWCKEAPKELDFN 199 (977)
Q Consensus 124 ~piasaSigqV~~A~--l~~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~--~~~~~~e~~~~l~~Eld~~ 199 (977)
++||+|++|+||+|+ .++|++||||+.+++.......+. . .. ..+.+. -.....+ .+..+.
T Consensus 34 ~~Lg~G~~g~Vy~a~~~~~~g~~vaiK~~~~~~~~~~~~~~-----~---~~-~~~~~~~~~~~~~~~------~~~~~~ 98 (237)
T smart00090 34 GCISTGKEANVYHALDFDGSGKERAVKIYRTGTLEFKRRDR-----Y---VD-GDFRFKYRKINPRKL------VRLWAE 98 (237)
T ss_pred CeeccCcceeEEEEEecCCCCcEEEEEEEEcCcceecchhh-----h---cc-cchhhccCCCCHHHH------HHHHHH
Confidence 589999999999998 578999999999876532111000 0 00 000000 0000000 012356
Q ss_pred HHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeeecCCceEEeeccCCCCCCChHHHHhcCCCHH---HHHHHHHH
Q 002039 200 SEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQSSETVLILEFMDGIRLNDCESLEAFGVNKQ---KVVEEITR 276 (977)
Q Consensus 200 ~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~---~l~~~l~~ 276 (977)
.|++++.++.+. .+.+|+++..+..+|||||++|.++.... +.....+.. .++..++.
T Consensus 99 ~E~~~L~~L~~~------------------~i~~p~~~~~~~~~lV~E~~~g~~L~~~~-~~~~~~~~~~~~~i~~qi~~ 159 (237)
T smart00090 99 KEFRNLQRLYEA------------------GVPVPKPIAWRRNVLVMEFIGGDGLPAPR-LKDVEPEEEEEFELYDDILE 159 (237)
T ss_pred HHHHHHHHHHhc------------------CCCCCeeeEecCceEEEEEecCCcccccc-cccCCcchHHHHHHHHHHHH
Confidence 788898888641 36678888766789999999998876542 112222322 33443333
Q ss_pred HHHHHHHhcC-ccccCCCCCCeEEccCCCCceEEEecccccccCHHHHHHHHHHHHHHHcCCHHHHHHHHHHcCcc
Q 002039 277 AYAHQIYVDG-FFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSSSMKQALAKMFFAAAEGDHVALLSAFAEMGLR 351 (977)
Q Consensus 277 ~~l~~i~~~G-~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~~~r~~~~~l~~a~~~~d~~~~~~~~~~~g~~ 351 (977)
.+.++|..| ++|+|+||+||+++ + ++++|+|||++.......+ .+++.+|.+.+...+.++|+.
T Consensus 160 -~l~~LH~~g~iiH~Dikp~NIli~-~--~~i~LiDFg~a~~~~~~~~-------~~~~~~d~~~~~~~~~~~~~~ 224 (237)
T smart00090 160 -EMRKLYKEGELVHGDLSEYNILVH-D--GKVVIIDVSQSVELDHPMA-------LEFLERDIRNIIRFFRRKGVD 224 (237)
T ss_pred -HHHHHHhcCCEEeCCCChhhEEEE-C--CCEEEEEChhhhccCCcch-------HHHHHHHHHHHHHHHHHcCCC
Confidence 378899999 99999999999998 4 7899999999998877553 356899999999999999985
No 17
>KOG0595 consensus Serine/threonine-protein kinase involved in autophagy [Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]
Probab=99.66 E-value=1.8e-16 Score=172.67 Aligned_cols=145 Identities=17% Similarity=0.217 Sum_probs=92.7
Q ss_pred ccccccccccEEEEEEec-CCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCcHHH
Q 002039 123 ETPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSE 201 (977)
Q Consensus 123 ~~piasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~E 201 (977)
.+-||+||||.||+|+++ +|..||||-.... .+..+..+.+..|+
T Consensus 15 ~~~iG~GsfavVykg~h~~~~~~VAIK~i~~~-----------------------------~l~~k~~e~L~~Ei----- 60 (429)
T KOG0595|consen 15 SREIGSGSFAVVYKGRHKKSGTEVAIKCIAKK-----------------------------KLNKKLVELLLSEI----- 60 (429)
T ss_pred hhhccCcceEEEEEeEeccCCceEEeeeehhh-----------------------------ccCHHHHHHHHHHH-----
Confidence 345999999999999984 7899999954211 00111222222233
Q ss_pred HHHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeee-cCCceEEeeccCCCCCCChHHHHhcCCCHHHHHHHHHH---H
Q 002039 202 AENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITR---A 277 (977)
Q Consensus 202 a~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~---~ 277 (977)
+-++.++| ...|.+-++.+ .+.-+||||||+|++|+++.. ..+.-.+..++...+ .
T Consensus 61 -~iLkel~H-----------------~nIV~l~d~~~~~~~i~lVMEyC~gGDLs~yi~--~~~~l~e~t~r~Fm~QLA~ 120 (429)
T KOG0595|consen 61 -KILKELKH-----------------PNIVRLLDCIEDDDFIYLVMEYCNGGDLSDYIR--RRGRLPEATARHFMQQLAS 120 (429)
T ss_pred -HHHHhcCC-----------------cceeeEEEEEecCCeEEEEEEeCCCCCHHHHHH--HcCCCCHHHHHHHHHHHHH
Confidence 33333322 11233334444 455689999999999998843 333222233332222 2
Q ss_pred HHHHHHhcCccccCCCCCCeEEccC-CC---CceEEEecccccccCHH
Q 002039 278 YAHQIYVDGFFNGDPHPGNFLVSKD-PP---HRPILLDFGLTKKLSSS 321 (977)
Q Consensus 278 ~l~~i~~~G~~H~D~hPgNIlv~~~-~~---g~i~LiDFG~~~~l~~~ 321 (977)
.++.+|..+|+|||+||.|||++.. .. -.++|.|||+++.+.+.
T Consensus 121 alq~L~~~~IiHRDLKPQNiLLs~~~~~~~~~~LKIADFGfAR~L~~~ 168 (429)
T KOG0595|consen 121 ALQFLHENNIIHRDLKPQNILLSTTARNDTSPVLKIADFGFARFLQPG 168 (429)
T ss_pred HHHHHHHCCeeeccCCcceEEeccCCCCCCCceEEecccchhhhCCch
Confidence 2777899999999999999999864 12 35899999999999853
No 18
>cd05144 RIO2_C RIO kinase family; RIO2, C-terminal catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO2 is present in archaea and eukaryotes. It contains an N-terminal winged helix (wHTH) domain and a C-terminal RIO kinase catalytic domain. The wHTH domain is primarily seen in DNA-binding proteins, although some wHTH dom
Probab=99.65 E-value=1.6e-15 Score=158.63 Aligned_cols=170 Identities=17% Similarity=0.251 Sum_probs=114.2
Q ss_pred ccccccccccEEEEEEecCCCEEEEEEecCChhhh--hHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCcHH
Q 002039 123 ETPLATASIAQVHRATLVDGRQVVVKVQHQGIKTI--ILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNS 200 (977)
Q Consensus 123 ~~piasaSigqV~~A~l~~G~~VAVKv~~p~i~~~--~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~ 200 (977)
.++|++|++|+||+|..++|+.||||+.+++.... ...+.+.+. . ........ ..+..+..
T Consensus 20 ~~~i~~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~~~~~----------~-~~~~~~~~------~~~~~~~~ 82 (198)
T cd05144 20 GNQIGVGKESDVYLALDPDGNPVALKFHRLGRTSFRKVKRKRDYLG----------D-RKHASWLY------LSRLAAQK 82 (198)
T ss_pred CCccccCcceEEEEEEcCCCCEEEEEEEecccchhhhhcchHHHHh----------c-cccchhHH------HhHHHHHH
Confidence 37899999999999998899999999987654211 100000000 0 00000000 11223455
Q ss_pred HHHHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeeecCCceEEeeccCCCCCCChHHHHhcCCCHHHHHHHHHHHHHH
Q 002039 201 EAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQSSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAYAH 280 (977)
Q Consensus 201 Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~l~ 280 (977)
|...+..+.+ ..+.+|.++.....++||||++|.+|.+.... .....++..++.. +.
T Consensus 83 E~~~l~~l~~------------------~~i~v~~~~~~~~~~lv~e~~~g~~L~~~~~~----~~~~~~~~~i~~~-l~ 139 (198)
T cd05144 83 EFAALKALYE------------------EGFPVPKPIDWNRHAVVMEYIDGVELYRVRVL----EDPEEVLDEILEE-IV 139 (198)
T ss_pred HHHHHHHHHH------------------cCCCCCceeecCCceEEEEEeCCcchhhcccc----ccHHHHHHHHHHH-HH
Confidence 6666666643 12457777776778999999999988765321 2344555555554 46
Q ss_pred HHHhcCccccCCCCCCeEEccCCCCceEEEecccccccCHHHHHHH----HHHHHHHH
Q 002039 281 QIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSSSMKQAL----AKMFFAAA 334 (977)
Q Consensus 281 ~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~~~r~~~----~~l~~a~~ 334 (977)
++|..|++|+|+||+||+++.+ ++++|+|||++..++.+.+..+ ...++++.
T Consensus 140 ~lh~~gi~H~Dl~p~Nill~~~--~~~~liDfg~~~~~~~~~~~~~~~~~~~~~~~~~ 195 (198)
T cd05144 140 KAYKHGIIHGDLSEFNILVDDD--EKIYIIDWPQMVSTDHPNAEELLDRDVENILRFF 195 (198)
T ss_pred HHHHCCCCcCCCCcccEEEcCC--CcEEEEECCccccCCCccHHHHHHHHHHHHHHHH
Confidence 7899999999999999999854 8999999999999999888886 45555544
No 19
>KOG0593 consensus Predicted protein kinase KKIAMRE [General function prediction only]
Probab=99.61 E-value=1.5e-15 Score=159.11 Aligned_cols=148 Identities=21% Similarity=0.283 Sum_probs=102.9
Q ss_pred ccccccccEEEEEEec-CCCEEEEEEec-----CChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCc
Q 002039 125 PLATASIAQVHRATLV-DGRQVVVKVQH-----QGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDF 198 (977)
Q Consensus 125 piasaSigqV~~A~l~-~G~~VAVKv~~-----p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~ 198 (977)
.+|.||+|.|++++.+ +|+-||||... |.+++...++++.|+.+.+
T Consensus 9 kvGEGSYGvV~KCrnk~TgqIVAIKkF~Esedd~~VkKIAlREIrmLKqLkH---------------------------- 60 (396)
T KOG0593|consen 9 KVGEGSYGVVMKCRNKDTGQIVAIKKFVESEDDPVVKKIALREIRMLKQLKH---------------------------- 60 (396)
T ss_pred ccccCcceEEEEeccCCcccEEEEEeeccCCccHHHHHHHHHHHHHHHhccc----------------------------
Confidence 4899999999999986 79999999764 3344444444444443321
Q ss_pred HHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeeecCCceEEeeccCCCCCCChHHHHhcCCCHHHHHHHHHHHH
Q 002039 199 NSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQSSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY 278 (977)
Q Consensus 199 ~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~ 278 (977)
.|+..+-+.|++ ..+-.||.|||+-.-|.+++. ...|.+.+.+-..+.+++
T Consensus 61 ----~NLVnLiEVFrr------------------------krklhLVFE~~dhTvL~eLe~-~p~G~~~~~vk~~l~Q~l 111 (396)
T KOG0593|consen 61 ----ENLVNLIEVFRR------------------------KRKLHLVFEYCDHTVLHELER-YPNGVPSELVKKYLYQLL 111 (396)
T ss_pred ----chHHHHHHHHHh------------------------cceeEEEeeecchHHHHHHHh-ccCCCCHHHHHHHHHHHH
Confidence 244444443331 233469999999766655533 345777777666666655
Q ss_pred --HHHHHhcCccccCCCCCCeEEccCCCCceEEEecccccccCH---HHHHHHHHHHH
Q 002039 279 --AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS---SMKQALAKMFF 331 (977)
Q Consensus 279 --l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~---~~r~~~~~l~~ 331 (977)
+...|.++++|||+||+||||+.. |.++|+|||+++.++. -..+.++.-||
T Consensus 112 ~ai~~cHk~n~IHRDIKPENILit~~--gvvKLCDFGFAR~L~~pgd~YTDYVATRWY 167 (396)
T KOG0593|consen 112 KAIHFCHKNNCIHRDIKPENILITQN--GVVKLCDFGFARTLSAPGDNYTDYVATRWY 167 (396)
T ss_pred HHhhhhhhcCeecccCChhheEEecC--CcEEeccchhhHhhcCCcchhhhhhhhhhc
Confidence 667789999999999999999966 8999999999999972 23444455554
No 20
>cd05119 RIO RIO kinase family, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases present in archaea, bacteria and eukaryotes. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. RIO kinases contain a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. Most organisms contain at least two RIO kinases, RIO1 and RIO2. A third protein, RIO3, is present in multicellular eukaryotes. In yeast, RIO1 and RIO2 are essential for survival. They funct
Probab=99.61 E-value=5.1e-15 Score=152.91 Aligned_cols=165 Identities=21% Similarity=0.292 Sum_probs=106.2
Q ss_pred cccccccccEEEEEEecCCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCcHHHHH
Q 002039 124 TPLATASIAQVHRATLVDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEAE 203 (977)
Q Consensus 124 ~piasaSigqV~~A~l~~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea~ 203 (977)
++||+|++|+||+|+..+|++||||+.+++.......+..++. ..... ....++..+ .+.....|.+
T Consensus 3 ~~lg~G~~g~Vy~a~~~~~~~vavKv~~~~~~~~~~~~~~~~~---~~~~~-~~~~~~~~~---------~~~~~~~e~~ 69 (187)
T cd05119 3 GPIGTGKEADVYLALDGDGEPVAVKIYRTGRTSFKKRKRYRTG---DYRFG-RKKSNWRYL---------SRLWAEKEFR 69 (187)
T ss_pred cccccccceeEEEEECCCCCEEEEEEEecCccchhhhhhhhHH---HHHhc-cCCcchhhh---------hhHHHHHHHH
Confidence 5799999999999998889999999998865432221211100 00000 000011000 1112234556
Q ss_pred HHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeeecCCceEEeeccCCCC-----CCChHHHHhcCCCHHHHHHHHHHHH
Q 002039 204 NTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQSSETVLILEFMDGIR-----LNDCESLEAFGVNKQKVVEEITRAY 278 (977)
Q Consensus 204 n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~~~~~vLVmE~i~G~~-----L~~~~~~~~~~~~~~~l~~~l~~~~ 278 (977)
++.++.. ..+.+|+++.+...+|||||++|.. +.+... ......++..++..
T Consensus 70 ~l~~l~~------------------~~~~~~~~~~~~~~~lv~e~~~g~~~~~~~l~~~~~----~~~~~~~~~~~~~~- 126 (187)
T cd05119 70 NLKRLYE------------------AGVPVPKPIDLNRHVLVMEFIGGDGIPAPRLKDVRL----LEDPEELYDQILEL- 126 (187)
T ss_pred HHHHHHH------------------cCCCCCceEecCCCEEEEEEeCCCCccChhhhhhhh----cccHHHHHHHHHHH-
Confidence 6666643 1356888887778899999999943 333211 02233444444443
Q ss_pred HHHHHh-cCccccCCCCCCeEEccCCCCceEEEecccccccCHHHHHHHH
Q 002039 279 AHQIYV-DGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSSSMKQALA 327 (977)
Q Consensus 279 l~~i~~-~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~~~r~~~~ 327 (977)
+..+|. .|++|+|+||+||+++ + +.++|+|||++.....+.+..+.
T Consensus 127 l~~lh~~~~ivH~Dl~p~Nili~-~--~~~~liDfg~a~~~~~~~~~~~~ 173 (187)
T cd05119 127 MRKLYREAGLVHGDLSEYNILVD-D--GKVYIIDVPQAVEIDHPNAEEFL 173 (187)
T ss_pred HHHHhhccCcCcCCCChhhEEEE-C--CcEEEEECcccccccCcchHHHH
Confidence 667788 9999999999999998 4 78999999999988877666654
No 21
>KOG0605 consensus NDR and related serine/threonine kinases [General function prediction only]
Probab=99.61 E-value=2.3e-15 Score=169.00 Aligned_cols=150 Identities=17% Similarity=0.214 Sum_probs=99.9
Q ss_pred ccC-ccccccccccEEEEEEec-CCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccC
Q 002039 120 DFV-ETPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELD 197 (977)
Q Consensus 120 ~~d-~~piasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld 197 (977)
+|+ -++||.|.||+||.|+-+ +|+.+|+|+++.. ++-
T Consensus 142 DFe~Lk~IgkGAfGeVrLarKk~Tg~iyAmK~LkKS-------~M~---------------------------------- 180 (550)
T KOG0605|consen 142 DFELLKVIGKGAFGEVRLARKKDTGEIYAMKILKKS-------EML---------------------------------- 180 (550)
T ss_pred cchhheeeccccceeEEEEEEccCCcEEeeecccHH-------HHH----------------------------------
Confidence 344 389999999999999975 7999999987642 111
Q ss_pred cHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeee----cCCceEEeeccCCCCCCChHHHHhcCCCHHHHHHH
Q 002039 198 FNSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ----SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEE 273 (977)
Q Consensus 198 ~~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~----~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~ 273 (977)
-+.+.+|+..=|..+.. .. .-.|-++|. ....||||||++|+.+..+.. ...-+.....-..
T Consensus 181 ~~~Qv~hV~aERdiL~~------------~d-s~~vVKLyYsFQD~~~LYLiMEylPGGD~mTLL~-~~~~L~e~~arfY 246 (550)
T KOG0605|consen 181 KKNQVEHVRAERDILAE------------VD-SPWVVKLYYSFQDKEYLYLIMEYLPGGDMMTLLM-RKDTLTEDWARFY 246 (550)
T ss_pred hhhhHHHHHHHHHHhhh------------cC-CCcEEEEEEEecCCCeeEEEEEecCCccHHHHHH-hcCcCchHHHHHH
Confidence 11222333333333321 01 123344443 455699999999998876632 2122333333334
Q ss_pred HHHHH--HHHHHhcCccccCCCCCCeEEccCCCCceEEEecccccccCHHHHHHH
Q 002039 274 ITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSSSMKQAL 326 (977)
Q Consensus 274 l~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~~~r~~~ 326 (977)
+.+.+ +..||++|++||||||.|+||+.. |.|+|.|||++.-+....+..+
T Consensus 247 iaE~vlAI~~iH~~gyIHRDIKPdNlLiD~~--GHiKLSDFGLs~gl~~~~~~~~ 299 (550)
T KOG0605|consen 247 IAETVLAIESIHQLGYIHRDIKPDNLLIDAK--GHIKLSDFGLSTGLDKKHRIES 299 (550)
T ss_pred HHHHHHHHHHHHHcCcccccCChhheeecCC--CCEeeccccccchhhhhhhhhh
Confidence 44433 788999999999999999999966 9999999999988877666443
No 22
>PRK10359 lipopolysaccharide core biosynthesis protein; Provisional
Probab=99.58 E-value=8.4e-15 Score=154.28 Aligned_cols=140 Identities=21% Similarity=0.312 Sum_probs=97.9
Q ss_pred cccccccccEEEEEEecCCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCcHHHHH
Q 002039 124 TPLATASIAQVHRATLVDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEAE 203 (977)
Q Consensus 124 ~piasaSigqV~~A~l~~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea~ 203 (977)
+.++.|.+|+||.+.. +++.+|||+.+|.....- - +...+...=-|.+|++
T Consensus 37 ~~l~~~~f~~v~l~~~-~~~~~iiKvf~~~~~~~~---~-------------------------~~~~f~~g~~~e~Ea~ 87 (232)
T PRK10359 37 KVFRNIDDTKVSLIDT-DYGKYILKVFAPKVKRTE---R-------------------------FLKSFVKGDYYENLIV 87 (232)
T ss_pred EEecCCCceEEEEEec-CCCcEEEEEechhcCchH---H-------------------------HHHhhhhhHHHHHHHH
Confidence 7899999999999766 678999999998754220 0 0000001112568888
Q ss_pred HHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceee----------ecCCceEEeeccCCCCCCChHHHHhcCCCHHHHHHH
Q 002039 204 NTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVI----------QSSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEE 273 (977)
Q Consensus 204 n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~----------~~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~ 273 (977)
++.++.+. ++..|..+ .++..+|||||++|.+|.++.. .+. .....
T Consensus 88 ~l~rL~~~------------------GI~~~~d~~~~~~~~~~~~~~~~~lvmEyi~G~tL~~~~~-----~~~-~~~~~ 143 (232)
T PRK10359 88 QTDRVRSE------------------GLASLNDFYLLAERKTLRYAHTYIMLIEYIEGVELNDMPE-----ISE-DVKAK 143 (232)
T ss_pred HHHHHHHC------------------CCCcceEeeeecccccccccCCeEEEEEEECCccHHHhhh-----ccH-HHHHH
Confidence 99988651 23333322 1467899999999999977632 122 23333
Q ss_pred HHHHHHHHHHhcCccccCCCCCCeEEccCCCCceEEEecccccccCH
Q 002039 274 ITRAYAHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 320 (977)
Q Consensus 274 l~~~~l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 320 (977)
+ ...+.++|..|++||||||+||+++++ | ++|||||++....+
T Consensus 144 i-~~~l~~lH~~gi~H~Dikp~Nili~~~--g-i~liDfg~~~~~~e 186 (232)
T PRK10359 144 I-KASIESLHQHGMVSGDPHKGNFIVSKN--G-LRIIDLSGKRCTAQ 186 (232)
T ss_pred H-HHHHHHHHHcCCccCCCChHHEEEeCC--C-EEEEECCCcccccc
Confidence 3 335889999999999999999999865 6 99999999987754
No 23
>KOG0581 consensus Mitogen-activated protein kinase kinase (MAP2K) [Signal transduction mechanisms]
Probab=99.54 E-value=8.1e-15 Score=158.61 Aligned_cols=139 Identities=19% Similarity=0.214 Sum_probs=93.0
Q ss_pred cccccccccEEEEEEec-CCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCcHHHH
Q 002039 124 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (977)
Q Consensus 124 ~piasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea 202 (977)
.-||+|+-|.||+++++ +++-+|+|+.+-+++.. +++++.+|++..++.
T Consensus 85 ~~lG~G~gG~V~kv~Hk~t~~i~AlK~I~~~~~~~------------------------------~~~Qi~rEl~il~~~ 134 (364)
T KOG0581|consen 85 GVLGSGNGGTVYKVRHKPTGKIYALKVILLNIDPA------------------------------LQKQILRELEILRSC 134 (364)
T ss_pred hhcccCCCcEEEEEEEcCCCeEEEEEeecccCCHH------------------------------HHHHHHHHHHHHhhC
Confidence 56999999999999985 88999999985443322 222222333222221
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceee---e-cC-CceEEeeccCCCCCCChHHHHhcCCCHHHHHHHHHHH
Q 002039 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVI---Q-SS-ETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRA 277 (977)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~---~-~~-~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~ 277 (977)
. .-+|-..| . .. .-.++||||+|++|+++... ...+....+.....++
T Consensus 135 ------~--------------------spyIV~~ygaF~~~~~~isI~mEYMDgGSLd~~~k~-~g~i~E~~L~~ia~~V 187 (364)
T KOG0581|consen 135 ------Q--------------------SPYIVGFYGAFYSNGEEISICMEYMDGGSLDDILKR-VGRIPEPVLGKIARAV 187 (364)
T ss_pred ------C--------------------CCCeeeEeEEEEeCCceEEeehhhcCCCCHHHHHhh-cCCCCHHHHHHHHHHH
Confidence 0 11222222 2 33 36799999999999987431 1223333333333333
Q ss_pred H--HHHHHh-cCccccCCCCCCeEEccCCCCceEEEecccccccCHH
Q 002039 278 Y--AHQIYV-DGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSSS 321 (977)
Q Consensus 278 ~--l~~i~~-~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~~ 321 (977)
+ +..+|+ ++|+|||+||.||||+.. |+|+|+|||..+.+...
T Consensus 188 L~GL~YLh~~~~IIHRDIKPsNlLvNsk--GeVKicDFGVS~~lvnS 232 (364)
T KOG0581|consen 188 LRGLSYLHEERKIIHRDIKPSNLLVNSK--GEVKICDFGVSGILVNS 232 (364)
T ss_pred HHHHHHHhhccCeeeccCCHHHeeeccC--CCEEeccccccHHhhhh
Confidence 3 778885 999999999999999965 99999999999988655
No 24
>PF01163 RIO1: RIO1 family; InterPro: IPR018934 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents RIO kinase, they exhibit little sequence similarity with eukaryotic protein kinases, and are classified as atypical protein kinases []. The conformation of ATP when bound to the RIO kinases is unique when compared with ePKs, such as serine/threonine kinases or the insulin receptor tyrosine kinase, suggesting that the detailed mechanism by which the catalytic aspartate of RIO kinases participates in phosphoryl transfer may not be identical to that employed in known serine/threonine ePKs. Representatives of the RIO family are present in organisms varying from Archaea to humans, although the RIO3 proteins have only been identified in multicellular eukaryotes, to date. Yeast Rio1 and Rio2 proteins are required for proper cell cycle progression and chromosome maintenance, and are necessary for survival of the cells. These proteins are involved in the processing of 20 S pre-rRNA via late 18 S rRNA processing. ; GO: 0003824 catalytic activity, 0005524 ATP binding; PDB: 1TQP_A 1ZAR_A 1TQI_A 1ZAO_A 1TQM_A 3RE4_A 1ZTH_B 1ZP9_A 1ZTF_A.
Probab=99.53 E-value=2.7e-14 Score=146.70 Aligned_cols=179 Identities=19% Similarity=0.256 Sum_probs=112.6
Q ss_pred EEEEEecCCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCcHHHHHHHHHHHHHhC
Q 002039 134 VHRATLVDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEAENTRIVSANLG 213 (977)
Q Consensus 134 V~~A~l~~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea~n~~~~~~~~~ 213 (977)
||.|...+|++||||+-+.+.. .+.. ....... ..++...-.-............+|++++.++..
T Consensus 2 Vy~~~~~~~~~~a~K~~r~~~~-~Fk~-------~~~y~~~---~~r~~~~~~~~~~~~~~~~~~~~E~~~L~~l~~--- 67 (188)
T PF01163_consen 2 VYHAIDPDGEEVAVKIYRTGRT-SFKR-------RKKYRDY---DYRFKKYRHKSSWRYLIREWAKKEFRNLKRLYE--- 67 (188)
T ss_dssp EEEEEECTTEEEEEEEE-S----SS-H-------HHHHTTT---STTSTTC--G--CHHHHHHHHHHHHHHHHHCCC---
T ss_pred EEEEECCCCCEEEEEEeccCce-EEEE-------eeeeecc---cchhcccccccCHHHHHHHHHHHHHHHHHHHHH---
Confidence 8999998999999999987643 2211 1111111 111110000000111122345678888887643
Q ss_pred CCCCCCCCCCCCCCCCCeEeceeeecCCceEEeeccC--CCCCCChHHHHhcCCCHHHHHHHHHHHHHHHHHhcCccccC
Q 002039 214 CKNKHEDSNKKPAYEVDVLIPEVIQSSETVLILEFMD--GIRLNDCESLEAFGVNKQKVVEEITRAYAHQIYVDGFFNGD 291 (977)
Q Consensus 214 ~~~~~~~~~~~~~~~~~v~vP~v~~~~~~vLVmE~i~--G~~L~~~~~~~~~~~~~~~l~~~l~~~~l~~i~~~G~~H~D 291 (977)
.++.||+++..++++|||||++ |.++..+........+...+...+++.+...+|..|++|+|
T Consensus 68 ---------------~Gv~vP~p~~~~~~~ivME~I~~~G~~~~~l~~~~~~~~~~~~~~~~il~~~~~~~~~~givHGD 132 (188)
T PF01163_consen 68 ---------------AGVPVPKPYDYNRNVIVMEYIGEDGVPLPRLKDVDLSPEEPKELLEEILEEIIKMLHKAGIVHGD 132 (188)
T ss_dssp ---------------TT-SS--EEEEETTEEEEE--EETTEEGGCHHHCGGGGSTHHHHHHHHHHHHHHHHHCTTEEESS
T ss_pred ---------------CCccCCcEEEEeCCEEEEEecCCCccchhhHHhccccchhHHHHHHHHHHHHHHHHHhcCceecC
Confidence 3688999999889999999999 99988765433223467778888888888888999999999
Q ss_pred CCCCCeEEccCCCCceEEEecccccccCHHHHHHHHHHHHHHHcCCHHHHHHHHHHcCcc
Q 002039 292 PHPGNFLVSKDPPHRPILLDFGLTKKLSSSMKQALAKMFFAAAEGDHVALLSAFAEMGLR 351 (977)
Q Consensus 292 ~hPgNIlv~~~~~g~i~LiDFG~~~~l~~~~r~~~~~l~~a~~~~d~~~~~~~~~~~g~~ 351 (977)
|++.|||+++ +++++||||.+....... ...++.+|.+.+.+.|.+.|..
T Consensus 133 Ls~~NIlv~~---~~~~iIDf~qav~~~~p~-------a~~~l~RDi~ni~~fF~~~~~~ 182 (188)
T PF01163_consen 133 LSEYNILVDD---GKVYIIDFGQAVDSSHPN-------AEELLRRDIENIIRFFKKKGVQ 182 (188)
T ss_dssp -STTSEEEET---TCEEE--GTTEEETTSTT-------HHHHHHHHHHHHHHHHHCCC--
T ss_pred CChhhEEeec---ceEEEEecCcceecCCcc-------HHHHHHHHHHHHHHHHHHhCCC
Confidence 9999999984 489999999998876432 2234567888899999888764
No 25
>KOG4250 consensus TANK binding protein kinase TBK1 [Signal transduction mechanisms]
Probab=99.52 E-value=1.4e-14 Score=167.34 Aligned_cols=151 Identities=19% Similarity=0.290 Sum_probs=105.3
Q ss_pred ccccCccccccccccEEEEEEe-cCCCEEEEEEecCC----hhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhc
Q 002039 118 FMDFVETPLATASIAQVHRATL-VDGRQVVVKVQHQG----IKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEA 192 (977)
Q Consensus 118 f~~~d~~piasaSigqV~~A~l-~~G~~VAVKv~~p~----i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l 192 (977)
+...-.+-+|.|++|+||+++. .+|+.||||+-++. -.+....++.+|+++-
T Consensus 13 y~W~~~e~LG~Ga~g~V~rgrnketG~~vAvK~~~~~~~~r~~e~~~~EieilkKLn----------------------- 69 (732)
T KOG4250|consen 13 YLWEMDERLGKGAFGNVYRGRNKETGRLVAVKTFNKESSLRPRERWCREIEILKKLN----------------------- 69 (732)
T ss_pred cceeehhhhcCCccceeeeecccccccchhHHhhhhhcccchHHHHHHHHHHHHHcC-----------------------
Confidence 3344467899999999999996 58999999986642 2233333444444331
Q ss_pred ccccCcHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeee----cCCceEEeeccCCCCCCChHH--HHhcCCC
Q 002039 193 PKELDFNSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ----SSETVLILEFMDGIRLNDCES--LEAFGVN 266 (977)
Q Consensus 193 ~~Eld~~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~----~~~~vLVmE~i~G~~L~~~~~--~~~~~~~ 266 (977)
..|+.++ +.||+.-. +...|||||||.|++|..... ....|+.
T Consensus 70 ---------h~NIVk~----------------------f~iee~~~~~~~~~~~vlvmEyC~gGsL~~~L~~PEN~~GLp 118 (732)
T KOG4250|consen 70 ---------HPNIVKL----------------------FDIEETKFLGLVTRLPVLVMEYCSGGSLRKVLNSPENAYGLP 118 (732)
T ss_pred ---------chhhhhh----------------------cccCCccccCcccccceEEEeecCCCcHHHHhcCcccccCCC
Confidence 1222222 11222211 566799999999999976632 2345777
Q ss_pred HHHHHHHHHHHH--HHHHHhcCccccCCCCCCeEEccCCCCc--eEEEecccccccCHHH
Q 002039 267 KQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHR--PILLDFGLTKKLSSSM 322 (977)
Q Consensus 267 ~~~l~~~l~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~--i~LiDFG~~~~l~~~~ 322 (977)
..++...+..+. ++.++++||+|||||||||++-...+|+ -+|+|||+++.+++..
T Consensus 119 E~e~l~lL~d~~~al~~LrEn~IvHRDlKP~NIvl~~Gedgq~IyKLtDfG~Arel~d~s 178 (732)
T KOG4250|consen 119 ESEFLDLLSDLVSALRHLRENGIVHRDLKPGNIVLQIGEDGQSIYKLTDFGAARELDDNS 178 (732)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCceeccCCCCcEEEeecCCCceEEeeecccccccCCCCC
Confidence 777777776655 8899999999999999999987544465 3699999999998765
No 26
>KOG0600 consensus Cdc2-related protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=99.51 E-value=7.4e-15 Score=163.50 Aligned_cols=153 Identities=18% Similarity=0.276 Sum_probs=100.8
Q ss_pred CCChhhcccccCccccccccccEEEEEEe-cCCCEEEEEEec-----CChhhhhHhhHHHHHHHHHHHHhhCCCCCCchh
Q 002039 111 GESMGGMFMDFVETPLATASIAQVHRATL-VDGRQVVVKVQH-----QGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPI 184 (977)
Q Consensus 111 g~~~~~~f~~~d~~piasaSigqV~~A~l-~~G~~VAVKv~~-----p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~ 184 (977)
+..-.+.|+.++ -||.|.|||||+|+. .+|+.||+|-++ ++....+.+++.+|++
T Consensus 112 ~~r~~~~feki~--kIGeGTyg~VYkAr~~~tgkivALKKvr~d~~~~~~~~t~~REI~ILr~----------------- 172 (560)
T KOG0600|consen 112 GPRRADSFEKIE--KIGEGTYGQVYKARDLETGKIVALKKVRFDNEKEGFPITAIREIKILRR----------------- 172 (560)
T ss_pred cccchHHHHHHH--HhcCcchhheeEeeecccCcEEEEEEeecccCCCcchHHHHHHHHHHHh-----------------
Confidence 334456677775 499999999999996 689999999654 3333333333333333
Q ss_pred HHHHhhhcccccCcHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeee---cCCceEEeeccCCCCCCChHHHH
Q 002039 185 IDEWCKEAPKELDFNSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ---SSETVLILEFMDGIRLNDCESLE 261 (977)
Q Consensus 185 ~~e~~~~l~~Eld~~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~---~~~~vLVmE~i~G~~L~~~~~~~ 261 (977)
+.| ...+.+-.+.. ++.-|||+|||+ .|+.-+.
T Consensus 173 -----------------------l~H-----------------pNIikL~eivt~~~~~siYlVFeYMd----hDL~GLl 208 (560)
T KOG0600|consen 173 -----------------------LDH-----------------PNIIKLEEIVTSKLSGSIYLVFEYMD----HDLSGLL 208 (560)
T ss_pred -----------------------cCC-----------------CcccceeeEEEecCCceEEEEEeccc----chhhhhh
Confidence 221 01122222221 466799999998 3433322
Q ss_pred h---cCCCHHHHHHHHHHHH--HHHHHhcCccccCCCCCCeEEccCCCCceEEEecccccccCHHHHHHHHH
Q 002039 262 A---FGVNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSSSMKQALAK 328 (977)
Q Consensus 262 ~---~~~~~~~l~~~l~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~~~r~~~~~ 328 (977)
. ..+...++--.+-+++ ++++|..||+|||||..||||+.+ |.++|.|||+++.++...+..|..
T Consensus 209 ~~p~vkft~~qIKc~mkQLl~Gl~~cH~~gvlHRDIK~SNiLidn~--G~LKiaDFGLAr~y~~~~~~~~T~ 278 (560)
T KOG0600|consen 209 SSPGVKFTEPQIKCYMKQLLEGLEYCHSRGVLHRDIKGSNILIDNN--GVLKIADFGLARFYTPSGSAPYTS 278 (560)
T ss_pred cCCCcccChHHHHHHHHHHHHHHHHHhhcCeeeccccccceEEcCC--CCEEeccccceeeccCCCCccccc
Confidence 2 2344444444444443 778899999999999999999955 999999999999888776665443
No 27
>KOG1163 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=99.51 E-value=4.8e-14 Score=143.46 Aligned_cols=138 Identities=22% Similarity=0.371 Sum_probs=101.2
Q ss_pred cccccccccEEEEEEe-cCCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCcHHHH
Q 002039 124 TPLATASIAQVHRATL-VDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (977)
Q Consensus 124 ~piasaSigqV~~A~l-~~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea 202 (977)
++||+||||-+|.|.. .+|++||||+-...+.. | .+..|+
T Consensus 21 rkiGsGSFGdIy~~~~i~~ge~VAiK~Es~~a~h--------------------p-------------------qL~yEs 61 (341)
T KOG1163|consen 21 RKIGSGSFGDIYLGISITSGEEVAIKLESSKAKH--------------------P-------------------QLLYES 61 (341)
T ss_pred EeecCCchhheeeeeeccCCceEEEEeecccCCC--------------------c-------------------chhHHH
Confidence 7899999999999985 79999999986544321 1 123455
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeee----cCCceEEeeccCCCCCCChHHHHhcCCCHHHHHHHHHHHH
Q 002039 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ----SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY 278 (977)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~----~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~ 278 (977)
+--..+++ .+-+|.+.+ ...+|||||.+ |.+|.++.......+..+.+.-..=+.+
T Consensus 62 kvY~iL~~-------------------g~GiP~i~~y~~e~~ynvlVMdLL-GPsLEdLfnfC~R~ftmkTvLMLaDQml 121 (341)
T KOG1163|consen 62 KVYRILQG-------------------GVGIPHIRHYGTEKDYNVLVMDLL-GPSLEDLFNFCSRRFTMKTVLMLADQML 121 (341)
T ss_pred HHHHHhcc-------------------CCCCchhhhhccccccceeeeecc-CccHHHHHHHHhhhhhHHhHHHHHHHHH
Confidence 54444432 466787765 34579999988 9999998777766666555444333333
Q ss_pred --HHHHHhcCccccCCCCCCeEEccC-CCCceEEEecccccccCH
Q 002039 279 --AHQIYVDGFFNGDPHPGNFLVSKD-PPHRPILLDFGLTKKLSS 320 (977)
Q Consensus 279 --l~~i~~~G~~H~D~hPgNIlv~~~-~~g~i~LiDFG~~~~l~~ 320 (977)
++.+|.++|+||||||.|+|..-. -..++.|||||+++.+-+
T Consensus 122 ~RiEyvH~r~fiHRDIKPdNFLMGlgrh~~kl~LIDFGLaKky~d 166 (341)
T KOG1163|consen 122 SRIEYVHLRNFIHRDIKPDNFLMGLGRHCNKLYLIDFGLAKKYRD 166 (341)
T ss_pred HHHHHHHhhccccccCCccceeeccccccceEEEEeccchhhhcc
Confidence 788999999999999999998532 125799999999987743
No 28
>KOG0615 consensus Serine/threonine protein kinase Chk2 and related proteins [Cell cycle control, cell division, chromosome partitioning]
Probab=99.50 E-value=5.5e-14 Score=153.12 Aligned_cols=147 Identities=23% Similarity=0.290 Sum_probs=100.1
Q ss_pred ccccccccccEEEEEEe-cCCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCcHHH
Q 002039 123 ETPLATASIAQVHRATL-VDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSE 201 (977)
Q Consensus 123 ~~piasaSigqV~~A~l-~~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~E 201 (977)
.+.+|+|.||.|-.|.. ++|+.|||||.+..--... ......+.|..+|
T Consensus 177 ~~~LGsGafg~Vkla~e~~tgk~vAiKIi~krk~~~~------------------------------s~~~~~~~~v~~E 226 (475)
T KOG0615|consen 177 SKTLGSGAFGLVKLAYEKKTGKQVAIKIINKRKSTGC------------------------------SRAIAKTRDVQNE 226 (475)
T ss_pred eeeecCCceeEEEEEEEcccCcEEEeeeeehhhcccc------------------------------cccccchhhhHHH
Confidence 47899999999999986 5899999999764211000 0011234456778
Q ss_pred HHHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeee-cCCceEEeeccCCCCCCChHHHHhcCCCH----HHHHHHHHH
Q 002039 202 AENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAFGVNK----QKVVEEITR 276 (977)
Q Consensus 202 a~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLVmE~i~G~~L~~~~~~~~~~~~~----~~l~~~l~~ 276 (977)
++-+.++.| +..|.+-..+. ....|+||||++|+.|-+... +.+.-. +.+...++.
T Consensus 227 ieILkkL~H-----------------P~IV~~~d~f~~~ds~YmVlE~v~GGeLfd~vv--~nk~l~ed~~K~~f~Qll~ 287 (475)
T KOG0615|consen 227 IEILKKLSH-----------------PNIVRIKDFFEVPDSSYMVLEYVEGGELFDKVV--ANKYLREDLGKLLFKQLLT 287 (475)
T ss_pred HHHHHhcCC-----------------CCEEEEeeeeecCCceEEEEEEecCccHHHHHH--hccccccchhHHHHHHHHH
Confidence 887777643 12244444444 344599999999999877632 222222 233344444
Q ss_pred HHHHHHHhcCccccCCCCCCeEEccC-CCCceEEEecccccccC
Q 002039 277 AYAHQIYVDGFFNGDPHPGNFLVSKD-PPHRPILLDFGLTKKLS 319 (977)
Q Consensus 277 ~~l~~i~~~G~~H~D~hPgNIlv~~~-~~g~i~LiDFG~~~~l~ 319 (977)
+ +..||..||.||||||.|||+..+ .+-.+++.|||+++...
T Consensus 288 a-vkYLH~~GI~HRDiKPeNILl~~~~e~~llKItDFGlAK~~g 330 (475)
T KOG0615|consen 288 A-VKYLHSQGIIHRDIKPENILLSNDAEDCLLKITDFGLAKVSG 330 (475)
T ss_pred H-HHHHHHcCcccccCCcceEEeccCCcceEEEecccchhhccc
Confidence 3 678999999999999999999854 34578999999998774
No 29
>PRK09188 serine/threonine protein kinase; Provisional
Probab=99.49 E-value=1.2e-13 Score=156.19 Aligned_cols=139 Identities=15% Similarity=0.221 Sum_probs=96.0
Q ss_pred ccccccccccEEEEEEec--CCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCcHH
Q 002039 123 ETPLATASIAQVHRATLV--DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNS 200 (977)
Q Consensus 123 ~~piasaSigqV~~A~l~--~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~ 200 (977)
.+.||+|+||+||+|+.+ +|+.||||+..+..... ..+ . ....|.+
T Consensus 23 ~~~IG~G~fg~Vy~a~~~~~~~~~vAiK~~~~~~~~~-~~~-------------------------~------~~~~~~~ 70 (365)
T PRK09188 23 TAVLKRDVFSTVERGYFAGDPGTARAVRRRVSEVPWW-SKP-------------------------L------ARHLAAR 70 (365)
T ss_pred ccEEeecCcEEEEEEEEcCCCCeEEEEEEeccccccc-ccH-------------------------H------HHHHHHH
Confidence 367999999999999874 67888999765321100 000 0 0012567
Q ss_pred HHHHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeeecCCceEEeeccCCCCCCChHHHHhcCCCHHHHHHHHHHHHHH
Q 002039 201 EAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQSSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAYAH 280 (977)
Q Consensus 201 Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~l~ 280 (977)
|++.+.++.+ .-.||.++.....+|||||++|.+|... .. .....+...+++ .+.
T Consensus 71 E~~iL~~L~h-------------------~~iv~~l~~~~~~~LVmE~~~G~~L~~~---~~--~~~~~~~~~i~~-aL~ 125 (365)
T PRK09188 71 EIRALKTVRG-------------------IGVVPQLLATGKDGLVRGWTEGVPLHLA---RP--HGDPAWFRSAHR-ALR 125 (365)
T ss_pred HHHHHHhccC-------------------CCCCcEEEEcCCcEEEEEccCCCCHHHh---Cc--cchHHHHHHHHH-HHH
Confidence 7777776643 1235666666778999999999888522 11 112334444443 377
Q ss_pred HHHhcCccccCC-CCCCeEEccCCCCceEEEecccccccCH
Q 002039 281 QIYVDGFFNGDP-HPGNFLVSKDPPHRPILLDFGLTKKLSS 320 (977)
Q Consensus 281 ~i~~~G~~H~D~-hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 320 (977)
++|..|++|||+ ||+|||++.+ ++++|+|||+++.+.+
T Consensus 126 ~lH~~gIiHrDL~KP~NILv~~~--~~ikLiDFGlA~~~~~ 164 (365)
T PRK09188 126 DLHRAGITHNDLAKPQNWLMGPD--GEAAVIDFQLASVFRR 164 (365)
T ss_pred HHHHCCCeeCCCCCcceEEEcCC--CCEEEEECccceeccc
Confidence 899999999999 8999999754 7899999999998864
No 30
>PRK14879 serine/threonine protein kinase; Provisional
Probab=99.47 E-value=3.2e-13 Score=142.37 Aligned_cols=142 Identities=20% Similarity=0.269 Sum_probs=99.9
Q ss_pred cccccccccEEEEEEecCCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCcHHHHH
Q 002039 124 TPLATASIAQVHRATLVDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEAE 203 (977)
Q Consensus 124 ~piasaSigqV~~A~l~~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea~ 203 (977)
++||+|++|.||+|+. +|+.|+||+..+.....-..|.. + ....+.+|++
T Consensus 2 ~~l~~G~~~~vy~~~~-~~~~~~vK~~~~~~~~~~~~~~~------------------------~-----~~~~~~~E~~ 51 (211)
T PRK14879 2 KLIKRGAEAEIYLGDF-LGIKAVIKWRIPKRYRHPELDER------------------------I-----RRERTRREAR 51 (211)
T ss_pred cccccCceEEEEEEee-CCCceEEEEeCCcCCcChHHHHH------------------------H-----HHHHHHHHHH
Confidence 4689999999999987 78899999877643221111100 0 0113456777
Q ss_pred HHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeee--cCCceEEeeccCCCCCCChHHHHhcCCCHHHHHHHHHHHHHHH
Q 002039 204 NTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ--SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAYAHQ 281 (977)
Q Consensus 204 n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~--~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~l~~ 281 (977)
++..+.+ ..+.+|.++. ....+|||||++|.+|.++... .......++..+.. .+.+
T Consensus 52 ~l~~l~~------------------~~i~~p~~~~~~~~~~~lv~e~~~G~~L~~~~~~--~~~~~~~i~~~i~~-~l~~ 110 (211)
T PRK14879 52 IMSRARK------------------AGVNVPAVYFVDPENFIIVMEYIEGEPLKDLINS--NGMEELELSREIGR-LVGK 110 (211)
T ss_pred HHHHHHH------------------CCCCCCeEEEEeCCCCEEEEEEeCCcCHHHHHHh--ccHHHHHHHHHHHH-HHHH
Confidence 7776653 2466777763 6778999999999999876432 11122344444443 3778
Q ss_pred HHhcCccccCCCCCCeEEccCCCCceEEEecccccccC
Q 002039 282 IYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 319 (977)
Q Consensus 282 i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~ 319 (977)
+|..|++|+|+||+|||++ + +.++|+|||+++...
T Consensus 111 lH~~~i~H~Dl~p~Nil~~-~--~~~~liDf~~a~~~~ 145 (211)
T PRK14879 111 LHSAGIIHGDLTTSNMILS-G--GKIYLIDFGLAEFSK 145 (211)
T ss_pred HHhCCcccCCCCcccEEEE-C--CCEEEEECCcccCCC
Confidence 9999999999999999998 3 789999999988644
No 31
>KOG0661 consensus MAPK related serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.47 E-value=3.9e-14 Score=156.69 Aligned_cols=153 Identities=20% Similarity=0.263 Sum_probs=101.4
Q ss_pred cccccccccEEEEEEe-cCCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCcHHHH
Q 002039 124 TPLATASIAQVHRATL-VDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (977)
Q Consensus 124 ~piasaSigqV~~A~l-~~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea 202 (977)
+-+|.|+||.||+|+. .+|+.||||-.+..... . +|+-=.+|.
T Consensus 16 ~klGDGTfGsV~la~~~~~~~~VAIK~MK~Kf~s--~----------------------------------ee~~nLREv 59 (538)
T KOG0661|consen 16 RKLGDGTFGSVYLAKSKETGELVAIKKMKKKFYS--W----------------------------------EECMNLREV 59 (538)
T ss_pred HHhcCCcceeEEEeeecCCCceeeHHHHHhhhcc--H----------------------------------HHHHHHHHH
Confidence 4589999999999996 47999999943221110 0 112223344
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeeec--CCceEEeeccCCCCCCChHHHHhcCCCHHHHHHHHHHHH--
Q 002039 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQS--SETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY-- 278 (977)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~~--~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~-- 278 (977)
+.+.++.. ...-+.+-+|+.. ...++|||||+ ..|.++..-+...+....+...+.+++
T Consensus 60 ksL~kln~----------------hpniikL~Evi~d~~~~L~fVfE~Md-~NLYqLmK~R~r~fse~~irnim~QilqG 122 (538)
T KOG0661|consen 60 KSLRKLNP----------------HPNIIKLKEVIRDNDRILYFVFEFMD-CNLYQLMKDRNRLFSESDIRNIMYQILQG 122 (538)
T ss_pred HHHHhcCC----------------CCcchhhHHHhhccCceEeeeHHhhh-hhHHHHHhhcCCcCCHHHHHHHHHHHHHH
Confidence 44444321 1122334444432 24579999997 566666544445566777777777777
Q ss_pred HHHHHhcCccccCCCCCCeEEccCCCCceEEEecccccccCHH--HHHHHHHHHH
Q 002039 279 AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSSS--MKQALAKMFF 331 (977)
Q Consensus 279 l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~~--~r~~~~~l~~ 331 (977)
+..||++||||||+||+||||.. ..-|+|.|||+++.+... ..+.+..-||
T Consensus 123 L~hiHk~GfFHRDlKPENiLi~~--~~~iKiaDFGLARev~SkpPYTeYVSTRWY 175 (538)
T KOG0661|consen 123 LAHIHKHGFFHRDLKPENILISG--NDVIKIADFGLAREVRSKPPYTEYVSTRWY 175 (538)
T ss_pred HHHHHhcCcccccCChhheEecc--cceeEecccccccccccCCCcchhhhcccc
Confidence 89999999999999999999983 357999999999988543 3444444454
No 32
>KOG0574 consensus STE20-like serine/threonine kinase MST [Signal transduction mechanisms]
Probab=99.47 E-value=1.4e-14 Score=150.78 Aligned_cols=159 Identities=18% Similarity=0.213 Sum_probs=120.6
Q ss_pred HHHHHHHHHhCCChhhcccccCccccccccccEEEEEEec-CCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCC
Q 002039 101 EVSQTIEREFGESMGGMFMDFVETPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQY 179 (977)
Q Consensus 101 ~v~~~l~~elg~~~~~~f~~~d~~piasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~ 179 (977)
+..++=+..+.++++|+|.-.+ .+|.||+|.||+|.++ +|+.||||-.. +..||+
T Consensus 18 ~~~KLd~~sL~K~PEEVFDi~~--KLGEGSYGSV~KAIH~EsG~v~AIK~VP------V~sDLQ---------------- 73 (502)
T KOG0574|consen 18 DGFKLDSSALNKPPEEVFDIVG--KLGEGSYGSVHKAIHRESGHVLAIKKVP------VDTDLQ---------------- 73 (502)
T ss_pred cccccChhhhcCChHHHHHHHH--HhcCCcchHHHHHHHhccCcEEEEEecC------ccchHH----------------
Confidence 4455666788899999998775 4999999999999975 89999999543 223332
Q ss_pred CCchhHHHHhhhcccccCcHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeee----cCCceEEeeccCCCCCC
Q 002039 180 DFNPIIDEWCKEAPKELDFNSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ----SSETVLILEFMDGIRLN 255 (977)
Q Consensus 180 ~~~~~~~e~~~~l~~Eld~~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~----~~~~vLVmE~i~G~~L~ 255 (977)
+++.| ..-+.++. .-+|-+.|. .++.++|||||..++++
T Consensus 74 ---EIIKE--------------ISIMQQC~--------------------S~yVVKYYGSYFK~sDLWIVMEYCGAGSiS 116 (502)
T KOG0574|consen 74 ---EIIKE--------------ISIMQQCK--------------------SKYVVKYYGSYFKHSDLWIVMEYCGAGSIS 116 (502)
T ss_pred ---HHHHH--------------HHHHHHcC--------------------CchhhhhhhhhccCCceEeehhhcCCCcHH
Confidence 22221 12222211 122333332 67889999999999999
Q ss_pred ChHHHHhcCCCHHHHHHHHHHHH--HHHHHhcCccccCCCCCCeEEccCCCCceEEEecccccccCHHH
Q 002039 256 DCESLEAFGVNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSSSM 322 (977)
Q Consensus 256 ~~~~~~~~~~~~~~l~~~l~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~~~ 322 (977)
|+..++...+...+++..+...+ ++.+|...-+|||+|.||||++.+ |..+|.|||.++++++..
T Consensus 117 DI~R~R~K~L~E~EIs~iL~~TLKGL~YLH~~~KIHRDIKAGNILLNT~--G~AKLADFGVAGQLTDTM 183 (502)
T KOG0574|consen 117 DIMRARRKPLSEQEISAVLRDTLKGLQYLHDLKKIHRDIKAGNILLNTD--GIAKLADFGVAGQLTDTM 183 (502)
T ss_pred HHHHHhcCCccHHHHHHHHHHHHhHHHHHHHHHHHHhhcccccEEEccc--chhhhhhccccchhhhhH
Confidence 99888887888888888777766 888888889999999999999966 899999999999998865
No 33
>KOG4236 consensus Serine/threonine protein kinase PKC mu/PKD and related proteins [Signal transduction mechanisms]
Probab=99.45 E-value=1.1e-13 Score=153.60 Aligned_cols=160 Identities=18% Similarity=0.260 Sum_probs=108.8
Q ss_pred ChhhcccccCccccccccccEEEEEEe-cCCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhh
Q 002039 113 SMGGMFMDFVETPLATASIAQVHRATL-VDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKE 191 (977)
Q Consensus 113 ~~~~~f~~~d~~piasaSigqV~~A~l-~~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~ 191 (977)
++..+|+-|.++.+|||-||.||-|+. ++|++|||||+.. ++..
T Consensus 559 d~stvYQif~devLGSGQFG~VYgg~hRktGrdVAvKvIdK-----------------------------------lrFp 603 (888)
T KOG4236|consen 559 DISTVYQIFADEVLGSGQFGTVYGGKHRKTGRDVAVKVIDK-----------------------------------LRFP 603 (888)
T ss_pred hHHHHHHhhhHhhccCCcceeeecceecccCceeeeeeeec-----------------------------------ccCC
Confidence 567888889899999999999999997 5999999998632 0111
Q ss_pred cccccCcHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCC-eEeceeeecCCc-eEEeeccCCCCCCChHHHHhcCCCHHH
Q 002039 192 APKELDFNSEAENTRIVSANLGCKNKHEDSNKKPAYEVD-VLIPEVIQSSET-VLILEFMDGIRLNDCESLEAFGVNKQK 269 (977)
Q Consensus 192 l~~Eld~~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~-v~vP~v~~~~~~-vLVmE~i~G~~L~~~~~~~~~~~~~~~ 269 (977)
..+|-.+++|.+-++.+.+ ++ |..-..+++.++ +.|||-+.|.-|.-+...+. |.-.++
T Consensus 604 ~kqesqlR~EVaILq~l~H------------------PGiV~le~M~ET~ervFVVMEKl~GDMLEMILSsEk-gRL~er 664 (888)
T KOG4236|consen 604 TKQESQLRNEVAILQNLHH------------------PGIVNLECMFETPERVFVVMEKLHGDMLEMILSSEK-GRLPER 664 (888)
T ss_pred CchHHHHHHHHHHHHhcCC------------------CCeeEEEEeecCCceEEEEehhhcchHHHHHHHhhc-ccchHH
Confidence 1234445667666655432 23 344444555444 57999999977766544332 222222
Q ss_pred HHHH-HHH--HHHHHHHhcCccccCCCCCCeEEccCC-CCceEEEecccccccCHH-HHHHH
Q 002039 270 VVEE-ITR--AYAHQIYVDGFFNGDPHPGNFLVSKDP-PHRPILLDFGLTKKLSSS-MKQAL 326 (977)
Q Consensus 270 l~~~-l~~--~~l~~i~~~G~~H~D~hPgNIlv~~~~-~g~i~LiDFG~~~~l~~~-~r~~~ 326 (977)
+-+- +.+ ..++.+|..||+|||+||+|||+.... --+++|+|||.++.+.++ +|+.+
T Consensus 665 ~TkFlvtQIL~ALr~LH~knIvHCDLKPENVLLas~~~FPQvKlCDFGfARiIgEksFRrsV 726 (888)
T KOG4236|consen 665 ITKFLVTQILVALRYLHFKNIVHCDLKPENVLLASASPFPQVKLCDFGFARIIGEKSFRRSV 726 (888)
T ss_pred HHHHHHHHHHHHHHHhhhcceeeccCCchheeeccCCCCCceeeccccceeecchhhhhhhh
Confidence 2221 222 237888999999999999999997542 247999999999999775 45543
No 34
>KOG0667 consensus Dual-specificity tyrosine-phosphorylation regulated kinase [General function prediction only]
Probab=99.45 E-value=3.5e-13 Score=155.51 Aligned_cols=146 Identities=16% Similarity=0.155 Sum_probs=97.6
Q ss_pred ccccccccccEEEEEEe-cCCCEEEEEEecCChh--hhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCcH
Q 002039 123 ETPLATASIAQVHRATL-VDGRQVVVKVQHQGIK--TIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFN 199 (977)
Q Consensus 123 ~~piasaSigqV~~A~l-~~G~~VAVKv~~p~i~--~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~ 199 (977)
.+.||.|+||||-||.. ++++.|||||++-.-. .+..
T Consensus 191 ~e~LGkGtFGQVvk~~d~~T~e~VAIKIiKN~k~f~~Q~~---------------------------------------- 230 (586)
T KOG0667|consen 191 LEVLGKGSFGQVVKAYDHKTGEIVAIKIIKNKKRFLRQAQ---------------------------------------- 230 (586)
T ss_pred EEEecccccceeEEEEecCCCcEEEEEeeccChHHHHHHH----------------------------------------
Confidence 47899999999999997 5899999999864321 1211
Q ss_pred HHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeee----cCCceEEeeccCCCCCCChHHHH-hcCCCHHHHHHHH
Q 002039 200 SEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ----SSETVLILEFMDGIRLNDCESLE-AFGVNKQKVVEEI 274 (977)
Q Consensus 200 ~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~----~~~~vLVmE~i~G~~L~~~~~~~-~~~~~~~~l~~~l 274 (977)
.|.+-++.+++. . ......+-+.+. ....+||.|.+ +..|.++.... -.|++...+...+
T Consensus 231 ~Ei~iL~~ln~~-d-------------~~~~~n~Vrm~d~F~fr~HlciVfELL-~~NLYellK~n~f~Glsl~~ir~~~ 295 (586)
T KOG0667|consen 231 IEIRILELLNKH-D-------------PDDKYNIVRMLDYFYFRNHLCIVFELL-STNLYELLKNNKFRGLSLPLVRKFA 295 (586)
T ss_pred HHHHHHHHHhcc-C-------------CCCCeeEEEeeeccccccceeeeehhh-hhhHHHHHHhcCCCCCCHHHHHHHH
Confidence 233344444321 0 112234444443 56678999998 57777774432 2345554444333
Q ss_pred HHHH--HHHHHhcCccccCCCCCCeEEccCCCCceEEEecccccccCHHHH
Q 002039 275 TRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSSSMK 323 (977)
Q Consensus 275 ~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~~~r 323 (977)
.+++ +..|++.|||||||||+|||+..-...+|++||||.+...++..-
T Consensus 296 ~Qil~~L~~L~~l~IIHcDLKPENILL~~~~r~~vKVIDFGSSc~~~q~vy 346 (586)
T KOG0667|consen 296 QQILTALLFLHELGIIHCDLKPENILLKDPKRSRIKVIDFGSSCFESQRVY 346 (586)
T ss_pred HHHHHHHHHHHhCCeeeccCChhheeeccCCcCceeEEecccccccCCcce
Confidence 3333 667889999999999999999765456899999999998876543
No 35
>KOG0659 consensus Cdk activating kinase (CAK)/RNA polymerase II transcription initiation/nucleotide excision repair factor TFIIH/TFIIK, kinase subunit CDK7 [Cell cycle control, cell division, chromosome partitioning; Transcription; Replication, recombination and repair]
Probab=99.44 E-value=1.1e-13 Score=143.12 Aligned_cols=143 Identities=21% Similarity=0.253 Sum_probs=94.8
Q ss_pred ccccccccccEEEEEEe-cCCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCcHHH
Q 002039 123 ETPLATASIAQVHRATL-VDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSE 201 (977)
Q Consensus 123 ~~piasaSigqV~~A~l-~~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~E 201 (977)
.+-+|.|.+|.||+|+. .+|+.||||-.+.+-.+ +.+.....+|+.+.+|
T Consensus 7 ~~~lGEG~~gvVyka~d~~t~~~VAIKKIkl~~~k-----------------------------dGi~~talREIK~Lqe 57 (318)
T KOG0659|consen 7 LEKLGEGTYGVVYKARDTETGKRVAIKKIKLGNAK-----------------------------DGINRTALREIKLLQE 57 (318)
T ss_pred hhhhcCcceEEEEEEEecCCCcEEEEEEeeccccc-----------------------------cCccHHHHHHHHHHHH
Confidence 35689999999999996 68999999976654110 1111112233333334
Q ss_pred HH--HHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeeecCCceEEeeccCCCCCCChHHH---HhcCCCHHHHHHHHHH
Q 002039 202 AE--NTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQSSETVLILEFMDGIRLNDCESL---EAFGVNKQKVVEEITR 276 (977)
Q Consensus 202 a~--n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~~~~~vLVmE~i~G~~L~~~~~~---~~~~~~~~~l~~~l~~ 276 (977)
.+ |+..+.+.|-. .+.-.||.||++ +|++.. +..-+.+..+-..+..
T Consensus 58 l~h~nIi~LiD~F~~------------------------~~~l~lVfEfm~----tdLe~vIkd~~i~l~pa~iK~y~~m 109 (318)
T KOG0659|consen 58 LKHPNIIELIDVFPH------------------------KSNLSLVFEFMP----TDLEVVIKDKNIILSPADIKSYMLM 109 (318)
T ss_pred ccCcchhhhhhhccC------------------------CCceEEEEEecc----ccHHHHhcccccccCHHHHHHHHHH
Confidence 32 33333332211 344569999998 444332 2223455566555555
Q ss_pred HH--HHHHHhcCccccCCCCCCeEEccCCCCceEEEecccccccCHHHHH
Q 002039 277 AY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSSSMKQ 324 (977)
Q Consensus 277 ~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~~~r~ 324 (977)
.+ ++.+|.+.++|||+||.|+||+.+ |.++|.|||+++.+....+.
T Consensus 110 ~LkGl~y~H~~~IlHRDlKPnNLLis~~--g~lKiADFGLAr~f~~p~~~ 157 (318)
T KOG0659|consen 110 TLKGLAYCHSKWILHRDLKPNNLLISSD--GQLKIADFGLARFFGSPNRI 157 (318)
T ss_pred HHHHHHHHHhhhhhcccCCccceEEcCC--CcEEeecccchhccCCCCcc
Confidence 55 778899999999999999999966 99999999999988755444
No 36
>KOG0594 consensus Protein kinase PCTAIRE and related kinases [General function prediction only]
Probab=99.43 E-value=3.8e-13 Score=145.58 Aligned_cols=148 Identities=21% Similarity=0.227 Sum_probs=91.6
Q ss_pred hcccccCccccccccccEEEEEEe-cCCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhccc
Q 002039 116 GMFMDFVETPLATASIAQVHRATL-VDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPK 194 (977)
Q Consensus 116 ~~f~~~d~~piasaSigqV~~A~l-~~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ 194 (977)
+.|+.++. +|.|++|.||+|+. .+|+.||+|.++-.-++.- .|
T Consensus 11 ~~~~~~ek--lGeGtyg~Vykar~~~~g~~VALKkirl~~~~EG-----------------~P----------------- 54 (323)
T KOG0594|consen 11 FDYEKVEK--LGEGTYGVVYKARSKRTGKFVALKKIRLEFEEEG-----------------VP----------------- 54 (323)
T ss_pred HHHHHHHH--hCCCCceEEEEEEEecCCCEEEEEEEeccccccC-----------------CC-----------------
Confidence 34555544 99999999999997 5899999998763322100 00
Q ss_pred ccCcHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeee-cC------CceEEeeccCCCCCCChHHHHh---cC
Q 002039 195 ELDFNSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SS------ETVLILEFMDGIRLNDCESLEA---FG 264 (977)
Q Consensus 195 Eld~~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~------~~vLVmE~i~G~~L~~~~~~~~---~~ 264 (977)
..-.+|..-++++++. ++ .+.+-.+.. .+ .-+||+||++ .+|.++..... .+
T Consensus 55 -~taiREisllk~L~~~---------------~~-iv~L~dv~~~~~~~~~~~~l~lvfe~~d-~DL~~ymd~~~~~~~g 116 (323)
T KOG0594|consen 55 -STAIREISLLKRLSHA---------------NH-IVRLHDVIHTSNNHRGIGKLYLVFEFLD-RDLKKYMDSLPKKPQG 116 (323)
T ss_pred -chhhHHHHHHHHhCCC---------------cc-eEEEEeeeeecccccccceEEEEEEeec-ccHHHHHHhccccccC
Confidence 0112333444444321 01 223333333 22 4569999997 23333322222 24
Q ss_pred CCHHHHHHHHHHHH--HHHHHhcCccccCCCCCCeEEccCCCCceEEEecccccccC
Q 002039 265 VNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 319 (977)
Q Consensus 265 ~~~~~l~~~l~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~ 319 (977)
.+...+-..+.+++ +..+|.+||+|||+||.||||+++ |.++|+|||+++.+.
T Consensus 117 ~~~~~ik~~m~Qll~gl~~~H~~~IlHRDLKPQNlLi~~~--G~lKlaDFGlAra~~ 171 (323)
T KOG0594|consen 117 LPPRLIKSFMRQLLRGLAFLHSHGILHRDLKPQNLLISSS--GVLKLADFGLARAFS 171 (323)
T ss_pred CCHHHHHHHHHHHHHHHHHHHhCCeecccCCcceEEECCC--CcEeeeccchHHHhc
Confidence 55433333333333 677899999999999999999965 999999999998665
No 37
>TIGR03724 arch_bud32 Kae1-associated kinase Bud32. Members of this protein family are the Bud32 protein associated with Kae1 (kinase-associated endopeptidase 1) in the Archaea. In many Archaeal genomes, Kae1 and Bud32 are fused. The complex is homologous to the Kae1 and Bud32 subunits of the eukaryotic KEOPS complex, an apparently ancient protein kinase-containing molecular machine.
Probab=99.43 E-value=2.2e-12 Score=134.69 Aligned_cols=139 Identities=22% Similarity=0.267 Sum_probs=96.3
Q ss_pred cccccccEEEEEEecCCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCcHHHHHHH
Q 002039 126 LATASIAQVHRATLVDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEAENT 205 (977)
Q Consensus 126 iasaSigqV~~A~l~~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea~n~ 205 (977)
||+|++|.||+|.. +|++|+||+..+.....-..|.. .+...+.+|.+++
T Consensus 2 ig~G~~~~vy~~~~-~~~~~viK~~~~~~~~~~~~~~~-----------------------------~~~~~~~~E~~~l 51 (199)
T TIGR03724 2 IAKGAEAIIYLGDF-LGLKAVIKERVPKSYRHPELDER-----------------------------IRRERTRNEARLL 51 (199)
T ss_pred CCCCceEEEEEeec-CCccEEEEEecCCcCcCchHHHH-----------------------------HHHHHHHHHHHHH
Confidence 78999999999985 78999999865432111000000 0001245677777
Q ss_pred HHHHHHhCCCCCCCCCCCCCCCCCCeEeceeee--cCCceEEeeccCCCCCCChHHHHhcCCCHHHHHHHHHHHHHHHHH
Q 002039 206 RIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ--SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAYAHQIY 283 (977)
Q Consensus 206 ~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~--~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~l~~i~ 283 (977)
..+.+ ..+.+|.++. ....+|||||++|.+|.+.... .. ..++..+... +..+|
T Consensus 52 ~~l~~------------------~~i~~p~~~~~~~~~~~lv~e~~~g~~l~~~~~~--~~---~~~~~~i~~~-l~~lH 107 (199)
T TIGR03724 52 SRARK------------------AGVNTPVVYDVDPDNKTIVMEYIEGKPLKDVIEE--GN---DELLREIGRL-VGKLH 107 (199)
T ss_pred HHHHH------------------CCCCCCEEEEEECCCCEEEEEEECCccHHHHHhh--cH---HHHHHHHHHH-HHHHH
Confidence 77654 2356777775 5566999999999998776321 11 1444444443 66899
Q ss_pred hcCccccCCCCCCeEEccCCCCceEEEecccccccCHH
Q 002039 284 VDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSSS 321 (977)
Q Consensus 284 ~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~~ 321 (977)
..|++|+|+||+||+++ + ++++++|||+++.....
T Consensus 108 ~~gi~H~Dl~~~Nil~~-~--~~~~liDfg~a~~~~~~ 142 (199)
T TIGR03724 108 KAGIVHGDLTTSNIIVR-D--DKLYLIDFGLGKYSDEI 142 (199)
T ss_pred HCCeecCCCCcceEEEE-C--CcEEEEECCCCcCCCcH
Confidence 99999999999999998 4 78999999998876543
No 38
>KOG0575 consensus Polo-like serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=99.43 E-value=8.9e-14 Score=158.72 Aligned_cols=138 Identities=18% Similarity=0.210 Sum_probs=98.2
Q ss_pred cccccccccEEEEEEe-cCCCEEEEEEec------CChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhccccc
Q 002039 124 TPLATASIAQVHRATL-VDGRQVVVKVQH------QGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKEL 196 (977)
Q Consensus 124 ~piasaSigqV~~A~l-~~G~~VAVKv~~------p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~El 196 (977)
+-||.|+||+||+++. .+|+.||+||.. ++..+.+..++++.+.+.+
T Consensus 24 ~~LGkGgFA~cYe~~~~~tge~~A~KvVpk~~l~k~~~reKv~~EIeIHr~L~H-------------------------- 77 (592)
T KOG0575|consen 24 RFLGKGGFARCYEARDLDTGEVVAVKVVPKKLLKKPKQREKVLNEIEIHRSLKH-------------------------- 77 (592)
T ss_pred eeeccCcceEEEEEEEcCCCcEEEEEEeehHHhcCcchHHHHHHHHHHHHhcCC--------------------------
Confidence 6799999999999997 789999999864 3333333333322221110
Q ss_pred CcHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeee-cCCceEEeeccCCCCCCChHHHHhcCCCHHHHHHHHH
Q 002039 197 DFNSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEIT 275 (977)
Q Consensus 197 d~~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~ 275 (977)
.|+ |.+=..++ +..-|||.|.|+-.+|.++.. ++..+...++...+.
T Consensus 78 ------pnI-------------------------V~f~~~FEDs~nVYivLELC~~~sL~el~K-rrk~ltEpEary~l~ 125 (592)
T KOG0575|consen 78 ------PNI-------------------------VQFYHFFEDSNNVYIVLELCHRGSLMELLK-RRKPLTEPEARYFLR 125 (592)
T ss_pred ------CcE-------------------------EeeeeEeecCCceEEEEEecCCccHHHHHH-hcCCCCcHHHHHHHH
Confidence 111 22222223 455579999999999988755 344566666666666
Q ss_pred HHH--HHHHHhcCccccCCCCCCeEEccCCCCceEEEecccccccCHH
Q 002039 276 RAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSSS 321 (977)
Q Consensus 276 ~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~~ 321 (977)
+++ +..+|.+||+|||+|-|||+++++ .+|+|.|||++..+..+
T Consensus 126 QIv~GlkYLH~~~IiHRDLKLGNlfL~~~--~~VKIgDFGLAt~le~~ 171 (592)
T KOG0575|consen 126 QIVEGLKYLHSLGIIHRDLKLGNLFLNEN--MNVKIGDFGLATQLEYD 171 (592)
T ss_pred HHHHHHHHHHhcCceecccchhheeecCc--CcEEecccceeeeecCc
Confidence 655 888999999999999999999965 89999999999999743
No 39
>KOG0192 consensus Tyrosine kinase specific for activated (GTP-bound) p21cdc42Hs [Signal transduction mechanisms]
Probab=99.42 E-value=6e-13 Score=150.40 Aligned_cols=141 Identities=18% Similarity=0.127 Sum_probs=104.6
Q ss_pred ccccccccEEEEEEecCCCE-EEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCcHHHHH
Q 002039 125 PLATASIAQVHRATLVDGRQ-VVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEAE 203 (977)
Q Consensus 125 piasaSigqV~~A~l~~G~~-VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea~ 203 (977)
-+|+|++|+||+|..+ |+. ||||+..+.-...-. +-+|++|+.
T Consensus 48 ~iG~G~~g~V~~~~~~-g~~~vavK~~~~~~~~~~~-----------------------------------~~~f~~E~~ 91 (362)
T KOG0192|consen 48 VLGSGSFGTVYKGKWR-GTDVVAVKIISDPDFDDES-----------------------------------RKAFRREAS 91 (362)
T ss_pred hcccCCceeEEEEEeC-CceeEEEEEecchhcChHH-----------------------------------HHHHHHHHH
Confidence 3999999999999985 566 999987653221100 225778888
Q ss_pred HHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeeecC--CceEEeeccCCCCCCChHHH-HhcCCCHHHHHHHHHHHH--
Q 002039 204 NTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQSS--ETVLILEFMDGIRLNDCESL-EAFGVNKQKVVEEITRAY-- 278 (977)
Q Consensus 204 n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~~~--~~vLVmE~i~G~~L~~~~~~-~~~~~~~~~l~~~l~~~~-- 278 (977)
-+.+++| ...|.+.-+.... ...|||||++|++|.++... ....++....+..+.++.
T Consensus 92 il~~l~H-----------------pNIV~f~G~~~~~~~~~~iVtEy~~~GsL~~~l~~~~~~~l~~~~~l~~aldiArG 154 (362)
T KOG0192|consen 92 LLSRLRH-----------------PNIVQFYGACTSPPGSLCIVTEYMPGGSLSVLLHKKRKRKLPLKVRLRIALDIARG 154 (362)
T ss_pred HHHhCCC-----------------CCeeeEEEEEcCCCCceEEEEEeCCCCcHHHHHhhcccCCCCHHHHHHHHHHHHHH
Confidence 8877654 1123333333222 35799999999999998654 245678888788777766
Q ss_pred HHHHHhcC-ccccCCCCCCeEEccCCCC-ceEEEecccccccCH
Q 002039 279 AHQIYVDG-FFNGDPHPGNFLVSKDPPH-RPILLDFGLTKKLSS 320 (977)
Q Consensus 279 l~~i~~~G-~~H~D~hPgNIlv~~~~~g-~i~LiDFG~~~~l~~ 320 (977)
++.+|..+ +||||+||.||||+.+ + .++|+|||+++....
T Consensus 155 m~YLH~~~~iIHrDLK~~NiLv~~~--~~~~KI~DFGlsr~~~~ 196 (362)
T KOG0192|consen 155 MEYLHSEGPIIHRDLKSDNILVDLK--GKTLKIADFGLSREKVI 196 (362)
T ss_pred HHHHhcCCCeeecccChhhEEEcCC--CCEEEECCCccceeecc
Confidence 88999999 9999999999999965 6 899999999977654
No 40
>cd05146 RIO3_euk RIO kinase family; eukaryotic RIO3, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO3 is present only in multicellular eukaryotes. Its function is still unknown.
Probab=99.40 E-value=1.7e-12 Score=133.83 Aligned_cols=175 Identities=14% Similarity=0.145 Sum_probs=112.5
Q ss_pred cccccccccEEEEEEecC-------CCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCC-------CCCchhHHHHh
Q 002039 124 TPLATASIAQVHRATLVD-------GRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQ-------YDFNPIIDEWC 189 (977)
Q Consensus 124 ~piasaSigqV~~A~l~~-------G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~-------~~~~~~~~e~~ 189 (977)
-+|++|--+-||.|...+ +..|||||-+.+.... + ....++.. .+. .+...++..+
T Consensus 3 g~i~~GKEa~V~~~~~~~~~~~~~~~~~~avKi~r~~~~~F-k-------~~~~y~~~-~~rf~~~~~k~~~~~~~~~w- 72 (197)
T cd05146 3 GCISTGKESVVLHANGGSNETEQVIPTECAIKVFKTTLNEF-K-------NRDKYIKD-DYRFKDRFSKLNPRKIIRMW- 72 (197)
T ss_pred CccccCcceEEEEEecCcccccccCCceEEEEEEeccceeE-c-------ChhhhccC-CcccccCcCCCCHHHHHHHH-
Confidence 368999999999998643 5899999988654321 1 00111100 000 1112222222
Q ss_pred hhcccccCcHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeeecCCceEEeeccCCCCCCChHHHHhcCCC---
Q 002039 190 KEAPKELDFNSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQSSETVLILEFMDGIRLNDCESLEAFGVN--- 266 (977)
Q Consensus 190 ~~l~~Eld~~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~~~~~vLVmE~i~G~~L~~~~~~~~~~~~--- 266 (977)
-.+|++++.+++.. ++.||+++...+++|||||+.|..+... .+.....+
T Consensus 73 --------a~kE~r~L~rl~~~------------------Gv~vP~pi~~~~~~lvME~Ig~~~~~~~-~Lkd~~~~~~~ 125 (197)
T cd05146 73 --------AEKEMHNLKRMQKA------------------GIPCPEVVVLKKHVLVMSFIGDDQVPAP-KLKDAKLNDEE 125 (197)
T ss_pred --------HHHHHHHHHHHHHc------------------CCCCCeEEEecCCEEEEEEcCCCCccch-hhhccccCHHH
Confidence 35799999998762 5889999999999999999987533211 12211222
Q ss_pred HHHHHHHHHHHHHHHHHhcCccccCCCCCCeEEccCCCCceEEEecccccccCHHHHHHHHHHHHHHHcCCHHHHHHHH
Q 002039 267 KQKVVEEITRAYAHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSSSMKQALAKMFFAAAEGDHVALLSAF 345 (977)
Q Consensus 267 ~~~l~~~l~~~~l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~~~r~~~~~l~~a~~~~d~~~~~~~~ 345 (977)
...+...++..+...+|..|++|+||+|.|||+.+ ++++|||||.+...+...-.. ++.+|.+.+.+.|
T Consensus 126 ~~~i~~~i~~~l~~l~H~~glVHGDLs~~NIL~~~---~~v~iIDF~qav~~~hp~a~~-------~l~RD~~ni~~fF 194 (197)
T cd05146 126 MKNAYYQVLSMMKQLYKECNLVHADLSEYNMLWHD---GKVWFIDVSQSVEPTHPHGLE-------FLFRDCRNVIQFF 194 (197)
T ss_pred HHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEEC---CcEEEEECCCceeCCCCCHHH-------HHHHHHHHHHHHh
Confidence 23344555555555568999999999999999962 689999999999887543322 2345655555554
No 41
>KOG0598 consensus Ribosomal protein S6 kinase and related proteins [General function prediction only; Signal transduction mechanisms]
Probab=99.40 E-value=7.2e-13 Score=143.62 Aligned_cols=143 Identities=20% Similarity=0.277 Sum_probs=94.8
Q ss_pred cccC-ccccccccccEEEEEEec-CCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhccccc
Q 002039 119 MDFV-ETPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKEL 196 (977)
Q Consensus 119 ~~~d-~~piasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~El 196 (977)
++|+ .+.||.||||+|+.++.+ +|+-+|+||++... + + +
T Consensus 25 ~dF~~lkviGkG~fGkV~~Vrk~dt~kiYAmKvl~K~~---i----------v----------------~---------- 65 (357)
T KOG0598|consen 25 DDFEILKVIGKGSFGKVFQVRKKDTGKIYAMKVLKKKK---I----------V----------------E---------- 65 (357)
T ss_pred hheeeeeeeeccCCceEEEEEEcccCceeehhhhhhhH---h----------h----------------h----------
Confidence 3444 378999999999999975 68999999875321 0 0 0
Q ss_pred CcHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeee---cCCceEEeeccCCCCCCChHHHHhcC-CCHHHHHH
Q 002039 197 DFNSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ---SSETVLILEFMDGIRLNDCESLEAFG-VNKQKVVE 272 (977)
Q Consensus 197 d~~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~---~~~~vLVmE~i~G~~L~~~~~~~~~~-~~~~~l~~ 272 (977)
..|.+++..=+..+.. ...++.|.-.|. ..+-+||+||+.|+.|--. ++..+ ++...+.-
T Consensus 66 --~~e~~~~~~Er~IL~~------------v~hPFiv~l~ysFQt~~kLylVld~~~GGeLf~h--L~~eg~F~E~~arf 129 (357)
T KOG0598|consen 66 --KKEVRHTKAERNILSK------------IKHPFIVKLIYSFQTEEKLYLVLDYLNGGELFYH--LQREGRFSEDRARF 129 (357)
T ss_pred --hhhHHHHHHHHHHHHh------------CCCCcEeeeEEecccCCeEEEEEeccCCccHHHH--HHhcCCcchhHHHH
Confidence 0122222222222210 122466666664 4667999999999888643 33222 33333333
Q ss_pred HHHHHH--HHHHHhcCccccCCCCCCeEEccCCCCceEEEeccccccc
Q 002039 273 EITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKL 318 (977)
Q Consensus 273 ~l~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l 318 (977)
.++++. +..+|+.||+|||+||+|||++.+ |.|+|.|||+++..
T Consensus 130 YlaEi~lAL~~LH~~gIiyRDlKPENILLd~~--GHi~LtDFgL~k~~ 175 (357)
T KOG0598|consen 130 YLAEIVLALGYLHSKGIIYRDLKPENILLDEQ--GHIKLTDFGLCKED 175 (357)
T ss_pred HHHHHHHHHHHHHhCCeeeccCCHHHeeecCC--CcEEEeccccchhc
Confidence 344433 889999999999999999999966 99999999999843
No 42
>PRK12274 serine/threonine protein kinase; Provisional
Probab=99.39 E-value=2.9e-12 Score=132.47 Aligned_cols=159 Identities=16% Similarity=0.144 Sum_probs=106.1
Q ss_pred ccccccccccEEEEEEecCCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCcHHHH
Q 002039 123 ETPLATASIAQVHRATLVDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (977)
Q Consensus 123 ~~piasaSigqV~~A~l~~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea 202 (977)
.+.+++++||+||.+.. .+++|+.+-..-. -..++.++. . -+.+|+
T Consensus 7 ~~~l~~~~f~~v~~~~~-~~~k~~~~~l~~~--------~~~~~~~~~------------------------~-l~~rE~ 52 (218)
T PRK12274 7 NEPLKSDTFGRILLVRG-GERKFVRRDLSAA--------PWWLRGVAW------------------------W-LARREA 52 (218)
T ss_pred ceeecCCCcceEEEeec-CCceeeecccccc--------hhhhhhHHH------------------------H-HHHHHH
Confidence 36789999999998765 6778876632210 000010100 0 245688
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeeecCCceEEeeccCCCCCCChHHHHhcCCCHHHHHHHHHHHHHHHH
Q 002039 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQSSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAYAHQI 282 (977)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~l~~i 282 (977)
+.+.++.+ ...||.++.....+++|||++|.+|.+... . ....+...+.+ .++++
T Consensus 53 ~iL~~L~~-------------------~~~vP~ll~~~~~~lvmeyI~G~~L~~~~~--~---~~~~~~~qi~~-~L~~l 107 (218)
T PRK12274 53 LALRQLDG-------------------LPRTPRLLHWDGRHLDRSYLAGAAMYQRPP--R---GDLAYFRAARR-LLQQL 107 (218)
T ss_pred HHHHhcCC-------------------CCCCCEEEEEcCEEEEEeeecCccHHhhhh--h---hhHHHHHHHHH-HHHHH
Confidence 87777643 245788876567899999999998864321 1 11223333333 47789
Q ss_pred HhcCccccCC-CCCCeEEccCCCCceEEEecccccccCHHHHHHHHHHHHHHHcCCHHHHHHHHHH
Q 002039 283 YVDGFFNGDP-HPGNFLVSKDPPHRPILLDFGLTKKLSSSMKQALAKMFFAAAEGDHVALLSAFAE 347 (977)
Q Consensus 283 ~~~G~~H~D~-hPgNIlv~~~~~g~i~LiDFG~~~~l~~~~r~~~~~l~~a~~~~d~~~~~~~~~~ 347 (977)
|..|++|+|+ ||+|||++.+ ++++|||||++....+.-+ ...-+..+|...+.+.++.
T Consensus 108 H~~GIvHrDL~kp~NILv~~~--g~i~LIDFG~A~~~~~~~~-----~~r~L~~rDl~~llk~~~~ 166 (218)
T PRK12274 108 HRCGVAHNDLAKEANWLVQED--GSPAVIDFQLAVRGNPRAR-----WMRLLAREDLRHLLKHKRM 166 (218)
T ss_pred HHCcCccCCCCCcceEEEcCC--CCEEEEECCCceecCCcch-----HHHHHHHHHHHHHHHHHHh
Confidence 9999999999 7999999855 8899999999987664332 2222335888888888766
No 43
>KOG0663 consensus Protein kinase PITSLRE and related kinases [General function prediction only]
Probab=99.39 E-value=5.1e-13 Score=142.03 Aligned_cols=143 Identities=15% Similarity=0.138 Sum_probs=97.2
Q ss_pred cccccccccEEEEEEe-cCCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCcHHHH
Q 002039 124 TPLATASIAQVHRATL-VDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (977)
Q Consensus 124 ~piasaSigqV~~A~l-~~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea 202 (977)
..|++|+||.||||++ ++++.||+|-.+++-++. .+. +-..+|.
T Consensus 82 nrI~EGtyGiVYRakdk~t~eIVALKr~kmekek~--------------------GFP---------------ItsLREI 126 (419)
T KOG0663|consen 82 NRIEEGTYGVVYRAKDKKTDEIVALKRLKMEKEKE--------------------GFP---------------ITSLREI 126 (419)
T ss_pred hhcccCcceeEEEeccCCcceeEEeeecccccccC--------------------CCc---------------chhHHHH
Confidence 4699999999999998 588999999776543211 111 1234455
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeee-c--CCceEEeeccCCCCCCChHHHHhcCCCHHHHHHHHHHHH-
Q 002039 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-S--SETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY- 278 (977)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~--~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~- 278 (977)
.-+.+++| ...|.|-+|.- + .+-+||||||+- .|..+...-...+...++--.+.+.+
T Consensus 127 niLl~~~H-----------------~NIV~vkEVVvG~~~d~iy~VMe~~Eh-DLksl~d~m~q~F~~~evK~L~~QlL~ 188 (419)
T KOG0663|consen 127 NILLKARH-----------------PNIVEVKEVVVGSNMDKIYIVMEYVEH-DLKSLMETMKQPFLPGEVKTLMLQLLR 188 (419)
T ss_pred HHHHhcCC-----------------CCeeeeEEEEeccccceeeeeHHHHHh-hHHHHHHhccCCCchHHHHHHHHHHHH
Confidence 55555443 23466667664 2 456899999982 22222111112344444444444544
Q ss_pred -HHHHHhcCccccCCCCCCeEEccCCCCceEEEecccccccCHH
Q 002039 279 -AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSSS 321 (977)
Q Consensus 279 -l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~~ 321 (977)
++.+|.+.|+|||+||.|+|++++ |.+++.|||+++.+...
T Consensus 189 glk~lH~~wilHRDLK~SNLLm~~~--G~lKiaDFGLAR~ygsp 230 (419)
T KOG0663|consen 189 GLKHLHDNWILHRDLKTSNLLLSHK--GILKIADFGLAREYGSP 230 (419)
T ss_pred HHHHHhhceeEecccchhheeeccC--CcEEecccchhhhhcCC
Confidence 888999999999999999999966 99999999999998765
No 44
>KOG0592 consensus 3-phosphoinositide-dependent protein kinase (PDK1) [Signal transduction mechanisms]
Probab=99.39 E-value=1.1e-12 Score=147.45 Aligned_cols=142 Identities=26% Similarity=0.341 Sum_probs=95.3
Q ss_pred cccccccccEEEEEEe-cCCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCc-HHH
Q 002039 124 TPLATASIAQVHRATL-VDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDF-NSE 201 (977)
Q Consensus 124 ~piasaSigqV~~A~l-~~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~-~~E 201 (977)
+-||.|||++|++|+. .+++.+||||..... + ++| +-++| .+|
T Consensus 79 ~~lGeGSYStV~~A~~~~t~keYAiKVl~K~~-------------I----------------ike------~KvkYV~~E 123 (604)
T KOG0592|consen 79 KILGEGSYSTVVLAREKATGKEYAIKVLDKRY-------------I----------------IKE------KKVKYVTRE 123 (604)
T ss_pred heeccccceeEEEeeecCCCceeeHhhhhHHH-------------H----------------Hhh------cccchhhHH
Confidence 4699999999999997 479999999853210 0 000 11122 223
Q ss_pred HHHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeee----cCCceEEeeccCCCCCCChHHHHhcC-CCHH---HHHHH
Q 002039 202 AENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ----SSETVLILEFMDGIRLNDCESLEAFG-VNKQ---KVVEE 273 (977)
Q Consensus 202 a~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~----~~~~vLVmE~i~G~~L~~~~~~~~~~-~~~~---~l~~~ 273 (977)
-..+.++.+ ++ -|-++|. ....|.|+||.+++.|-++ +...| ++.. -.+..
T Consensus 124 k~~l~~L~~-----------------hP--givkLy~TFQD~~sLYFvLe~A~nGdll~~--i~K~Gsfde~caR~YAAe 182 (604)
T KOG0592|consen 124 KEALTQLSG-----------------HP--GIVKLYFTFQDEESLYFVLEYAPNGDLLDL--IKKYGSFDETCARFYAAE 182 (604)
T ss_pred HHHHHHhhC-----------------CC--CeEEEEEEeecccceEEEEEecCCCcHHHH--HHHhCcchHHHHHHHHHH
Confidence 334444432 22 2334443 5677999999999988766 33433 2211 12222
Q ss_pred HHHHHHHHHHhcCccccCCCCCCeEEccCCCCceEEEecccccccCHHHHH
Q 002039 274 ITRAYAHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSSSMKQ 324 (977)
Q Consensus 274 l~~~~l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~~~r~ 324 (977)
++. .++.||.+||||||+||+|||++.| |+|+|.|||.++.+++....
T Consensus 183 Ild-AleylH~~GIIHRDlKPENILLd~d--mhikITDFGsAK~l~~~~~~ 230 (604)
T KOG0592|consen 183 ILD-ALEYLHSNGIIHRDLKPENILLDKD--GHIKITDFGSAKILSPSQKS 230 (604)
T ss_pred HHH-HHHHHHhcCceeccCChhheeEcCC--CcEEEeeccccccCChhhcc
Confidence 222 2888999999999999999999966 99999999999999987654
No 45
>KOG0616 consensus cAMP-dependent protein kinase catalytic subunit (PKA) [Signal transduction mechanisms]
Probab=99.38 E-value=2.9e-12 Score=134.53 Aligned_cols=145 Identities=19% Similarity=0.235 Sum_probs=94.2
Q ss_pred cccC-ccccccccccEEEEEEec-CCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhccccc
Q 002039 119 MDFV-ETPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKEL 196 (977)
Q Consensus 119 ~~~d-~~piasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~El 196 (977)
++|+ .+-+|.||||.||.++.+ +|...|+||+...- +--++.+.+
T Consensus 44 ~dfe~~~tlGtGSFGrV~LVr~k~~g~yYAmKvL~k~~-------vVklKQveH-------------------------- 90 (355)
T KOG0616|consen 44 QDFERLKTLGTGSFGRVHLVREKHSGNYYAMKVLDKQK-------VVKLKQVEH-------------------------- 90 (355)
T ss_pred hhhhheeeeccCccceEEEEEEccCCceeehhhcCHHH-------HHHHHHHHH--------------------------
Confidence 3444 368999999999999985 78999999874321 111111111
Q ss_pred CcHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeee----cCCceEEeeccCCCCCCChHHHHhc-CCCHHH--
Q 002039 197 DFNSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ----SSETVLILEFMDGIRLNDCESLEAF-GVNKQK-- 269 (977)
Q Consensus 197 d~~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~----~~~~vLVmE~i~G~~L~~~~~~~~~-~~~~~~-- 269 (977)
..+|-+-+.++.+ + .+-+.+. .+..+|||||++|+.|-.+. +.. .++...
T Consensus 91 -~~nEk~vL~~v~~-------------------P-Flv~l~~t~~d~~~lymvmeyv~GGElFS~L--rk~~rF~e~~ar 147 (355)
T KOG0616|consen 91 -THNEKRVLKAVSH-------------------P-FLVKLYGTFKDNSNLYMVMEYVPGGELFSYL--RKSGRFSEPHAR 147 (355)
T ss_pred -HhhHHHHHhhccC-------------------c-eeEEEEEeeccCCeEEEEEeccCCccHHHHH--HhcCCCCchhHH
Confidence 1123222222211 1 1222332 46678999999999987763 332 233222
Q ss_pred HHHHHHHHHHHHHHhcCccccCCCCCCeEEccCCCCceEEEecccccccCHH
Q 002039 270 VVEEITRAYAHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSSS 321 (977)
Q Consensus 270 l~~~l~~~~l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~~ 321 (977)
....-+-+.++.||..++++||+||+|||++.+ |.|+++|||.++.++..
T Consensus 148 FYAAeivlAleylH~~~iiYRDLKPENiLlD~~--G~iKitDFGFAK~v~~r 197 (355)
T KOG0616|consen 148 FYAAEIVLALEYLHSLDIIYRDLKPENLLLDQN--GHIKITDFGFAKRVSGR 197 (355)
T ss_pred HHHHHHHHHHHHHHhcCeeeccCChHHeeeccC--CcEEEEeccceEEecCc
Confidence 222222234889999999999999999999966 99999999999999764
No 46
>KOG0583 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.37 E-value=2e-12 Score=147.36 Aligned_cols=147 Identities=17% Similarity=0.204 Sum_probs=96.6
Q ss_pred ccccccccccEEEEEEe-cCCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCcHHH
Q 002039 123 ETPLATASIAQVHRATL-VDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSE 201 (977)
Q Consensus 123 ~~piasaSigqV~~A~l-~~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~E 201 (977)
.+.||+|+||.|+.|+. .+|+.|||||........ + . ...... ..+|
T Consensus 22 ~~~lG~GsfgkV~~a~~~~t~~~vAiKii~~~~~~~---~-----------------~------~~~~~~------i~rE 69 (370)
T KOG0583|consen 22 GRTLGSGSFGKVKLAKHRLTGEKVAIKIIDRKKVSS---K-----------------S------QKLDEL------IKRE 69 (370)
T ss_pred eeeecCCCCeeEEEeeeccCCCeEEEEEechhcccc---c-----------------c------cccchh------hHHH
Confidence 36899999999999986 589999999865430000 0 0 000001 1145
Q ss_pred HHHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeee-cCCceEEeeccCCCCCCChHHHHhcCCCHHHHHHHHHHHH--
Q 002039 202 AENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY-- 278 (977)
Q Consensus 202 a~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~-- 278 (977)
..++++++.. ...+.+-+++. .+.-++||||+.|+.|-+.... ...+..........+++
T Consensus 70 i~~~~~~~~H----------------pnI~~l~ev~~t~~~~~ivmEy~~gGdL~~~i~~-~g~l~E~~ar~~F~Qlisa 132 (370)
T KOG0583|consen 70 ISILRRLRSH----------------PNIIRLLEVFATPTKIYIVMEYCSGGDLFDYIVN-KGRLKEDEARKYFRQLISA 132 (370)
T ss_pred HHHHHHhccC----------------CCEeEEEEEEecCCeEEEEEEecCCccHHHHHHH-cCCCChHHHHHHHHHHHHH
Confidence 5666666520 12345555665 5668999999999888776432 22233322222222222
Q ss_pred HHHHHhcCccccCCCCCCeEEccCCCCceEEEecccccccC
Q 002039 279 AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 319 (977)
Q Consensus 279 l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~ 319 (977)
+..+|..|++|||+||+|||++.++ ++++|+|||++....
T Consensus 133 v~y~H~~gi~HRDLK~ENilld~~~-~~~Kl~DFG~s~~~~ 172 (370)
T KOG0583|consen 133 VAYCHSRGIVHRDLKPENILLDGNE-GNLKLSDFGLSAISP 172 (370)
T ss_pred HHHHHhCCEeeCCCCHHHEEecCCC-CCEEEeccccccccC
Confidence 7788999999999999999999653 899999999998773
No 47
>KOG0608 consensus Warts/lats-like serine threonine kinases [Cell cycle control, cell division, chromosome partitioning]
Probab=99.36 E-value=5.9e-13 Score=150.67 Aligned_cols=143 Identities=18% Similarity=0.321 Sum_probs=96.2
Q ss_pred cccccCccccccccccEEEEEEec-CCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccc
Q 002039 117 MFMDFVETPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKE 195 (977)
Q Consensus 117 ~f~~~d~~piasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~E 195 (977)
.|..| ++||-|.||.|..++-- +...+|+|.++. .|.- .+.-...+..|
T Consensus 630 mFvki--k~iGvGAFGeV~Lv~KvDT~~lYAmKTLrK-------aDVl---------------------~rnQvaHVKAE 679 (1034)
T KOG0608|consen 630 MFVKI--KTIGVGAFGEVCLVRKVDTRALYAMKTLRK-------ADVL---------------------MRNQVAHVKAE 679 (1034)
T ss_pred ceEEE--eeecccccceeEEEeecchhhHHHHhhhHH-------HHHH---------------------hhhhhhhhhhh
Confidence 55555 68999999999999853 344567775432 1211 11111122344
Q ss_pred cCcHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeee----cCCceEEeeccCCCCCCChHHHHhcCCCHHHHH
Q 002039 196 LDFNSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ----SSETVLILEFMDGIRLNDCESLEAFGVNKQKVV 271 (977)
Q Consensus 196 ld~~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~----~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~ 271 (977)
-|.+.||.| .++| ++|. ....|.|||||+|+.+-.+ +-..|+-.+.++
T Consensus 680 RDILAEADn-------------------------~WVV-rLyySFQDkdnLYFVMdYIPGGDmMSL--LIrmgIFeE~LA 731 (1034)
T KOG0608|consen 680 RDILAEADN-------------------------EWVV-RLYYSFQDKDNLYFVMDYIPGGDMMSL--LIRMGIFEEDLA 731 (1034)
T ss_pred hhhHhhcCC-------------------------cceE-EEEEEeccCCceEEEEeccCCccHHHH--HHHhccCHHHHH
Confidence 555555543 2333 4443 4567899999999988766 445666566655
Q ss_pred HHHHH---HHHHHHHhcCccccCCCCCCeEEccCCCCceEEEecccccccC
Q 002039 272 EEITR---AYAHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 319 (977)
Q Consensus 272 ~~l~~---~~l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~ 319 (977)
+--+. +.++.+|.-|||||||||.|||||.| |.|+|.|||+|.-+.
T Consensus 732 RFYIAEltcAiesVHkmGFIHRDiKPDNILIDrd--GHIKLTDFGLCTGfR 780 (1034)
T KOG0608|consen 732 RFYIAELTCAIESVHKMGFIHRDIKPDNILIDRD--GHIKLTDFGLCTGFR 780 (1034)
T ss_pred HHHHHHHHHHHHHHHhccceecccCccceEEccC--Cceeeeeccccccce
Confidence 54333 33788999999999999999999977 999999999998653
No 48
>KOG0578 consensus p21-activated serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.36 E-value=4e-12 Score=144.24 Aligned_cols=176 Identities=18% Similarity=0.241 Sum_probs=117.0
Q ss_pred HHHHHHHhCCCC--CCHHHHHHHHHHHh-CCChhhcccccCccccccccccEEEEEEe-cCCCEEEEEEecC---Chhhh
Q 002039 85 SLLKQLQDSLPP--RPVQEVSQTIEREF-GESMGGMFMDFVETPLATASIAQVHRATL-VDGRQVVVKVQHQ---GIKTI 157 (977)
Q Consensus 85 ~~L~~Lqd~~p~--~~~~~v~~~l~~el-g~~~~~~f~~~d~~piasaSigqV~~A~l-~~G~~VAVKv~~p---~i~~~ 157 (977)
+...++.|+-.. ++-+++...+..-. ..++...|..|. -||.|+-|-||.|+. .+++.||||...- .-++.
T Consensus 239 ~~~~~~~d~~~~~~~~~~~~~~~l~~v~~~~dP~~~y~~~~--kigqgaSG~vy~A~~~~~~~~VaiK~m~l~~Q~~keL 316 (550)
T KOG0578|consen 239 QHKQQLSDSSAQSIVSKEEILAKLKRVVSQGDPRSKYTDFK--KIGQGATGGVYVARKISTKQEVAIKRMDLRKQPKKEL 316 (550)
T ss_pred hcccccCchhccccchHHHHHHHhheeccCCChhhhhcchh--hhccccccceeeeeeccCCceEEEEEEEeccCCchhh
Confidence 334444444322 33334444444322 234555666664 499999999999985 5889999996521 11222
Q ss_pred hHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCcHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceee
Q 002039 158 ILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVI 237 (977)
Q Consensus 158 ~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~ 237 (977)
+..++.+|+.. +-.|+.+|-+.|-.
T Consensus 317 ilnEi~Vm~~~--------------------------------~H~NiVnfl~Sylv----------------------- 341 (550)
T KOG0578|consen 317 LLNEILVMRDL--------------------------------HHPNIVNFLDSYLV----------------------- 341 (550)
T ss_pred hHHHHHHHHhc--------------------------------cchHHHHHHHHhcc-----------------------
Confidence 22222222211 11355555443310
Q ss_pred ecCCceEEeeccCCCCCCChHHHHhcCCCHHHHHHHHHHHH--HHHHHhcCccccCCCCCCeEEccCCCCceEEEecccc
Q 002039 238 QSSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLT 315 (977)
Q Consensus 238 ~~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~ 315 (977)
..+.+.||||++|++|.|+.. ...++..+++....+.+ ++.+|..||+|||||-.|||++.+ |.++|.|||+|
T Consensus 342 -~deLWVVMEym~ggsLTDvVt--~~~~~E~qIA~Icre~l~aL~fLH~~gIiHrDIKSDnILL~~~--g~vKltDFGFc 416 (550)
T KOG0578|consen 342 -GDELWVVMEYMEGGSLTDVVT--KTRMTEGQIAAICREILQGLKFLHARGIIHRDIKSDNILLTMD--GSVKLTDFGFC 416 (550)
T ss_pred -cceeEEEEeecCCCchhhhhh--cccccHHHHHHHHHHHHHHHHHHHhcceeeeccccceeEeccC--CcEEEeeeeee
Confidence 355689999999999999854 34466777777666665 889999999999999999999976 89999999999
Q ss_pred cccCHHH
Q 002039 316 KKLSSSM 322 (977)
Q Consensus 316 ~~l~~~~ 322 (977)
.+++++.
T Consensus 417 aqi~~~~ 423 (550)
T KOG0578|consen 417 AQISEEQ 423 (550)
T ss_pred ecccccc
Confidence 9998876
No 49
>KOG0577 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.36 E-value=6.5e-13 Score=149.36 Aligned_cols=177 Identities=16% Similarity=0.184 Sum_probs=118.9
Q ss_pred CCChhhcccccCccccccccccEEEEEEe-cCCCEEEEEEe-cCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHH
Q 002039 111 GESMGGMFMDFVETPLATASIAQVHRATL-VDGRQVVVKVQ-HQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEW 188 (977)
Q Consensus 111 g~~~~~~f~~~d~~piasaSigqV~~A~l-~~G~~VAVKv~-~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~ 188 (977)
..+++++|.++ +-||-||||-||-|+. ++.+.||||-. +.|-. -.+.|
T Consensus 21 k~DPEklf~dL--rEIGHGSFGAVYfArd~~n~evVAIKKMsySGKQ----------------------------s~EKW 70 (948)
T KOG0577|consen 21 KDDPEKLFSDL--REIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQ----------------------------SNEKW 70 (948)
T ss_pred cCCHHHHHHHH--HHhcCCccceeEEeeccCccceeeeeeccccccc----------------------------cHHHH
Confidence 45778888765 4599999999999997 58889999954 22211 11122
Q ss_pred hhhcccccCcHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeee-cCCceEEeeccCCCCCCChHHHHhcCCCH
Q 002039 189 CKEAPKELDFNSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAFGVNK 267 (977)
Q Consensus 189 ~~~l~~Eld~~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLVmE~i~G~~L~~~~~~~~~~~~~ 267 (977)
. |...|.+-+..+++ +..+-.-..|. ....+||||||-| +-+|+......++..
T Consensus 71 q-------DIlKEVrFL~~l~H-----------------PntieYkgCyLre~TaWLVMEYClG-SAsDlleVhkKplqE 125 (948)
T KOG0577|consen 71 Q-------DILKEVRFLRQLRH-----------------PNTIEYKGCYLREHTAWLVMEYCLG-SASDLLEVHKKPLQE 125 (948)
T ss_pred H-------HHHHHHHHHHhccC-----------------CCcccccceeeccchHHHHHHHHhc-cHHHHHHHHhccchH
Confidence 2 23334444444432 11111122232 4667999999987 556776666666666
Q ss_pred HHHHHHHHHHH--HHHHHhcCccccCCCCCCeEEccCCCCceEEEecccccccCHHHH------HHHHHHHHHHHcCCHH
Q 002039 268 QKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSSSMK------QALAKMFFAAAEGDHV 339 (977)
Q Consensus 268 ~~l~~~l~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~~~r------~~~~~l~~a~~~~d~~ 339 (977)
-+|+.....++ +..+|.++.||||+|.||||+++. |.++|.|||.+...++... +.--.+++|.-.+.|+
T Consensus 126 vEIAAi~~gaL~gLaYLHS~~~IHRDiKAGNILLse~--g~VKLaDFGSAsi~~PAnsFvGTPywMAPEVILAMDEGqYd 203 (948)
T KOG0577|consen 126 VEIAAITHGALQGLAYLHSHNRIHRDIKAGNILLSEP--GLVKLADFGSASIMAPANSFVGTPYWMAPEVILAMDEGQYD 203 (948)
T ss_pred HHHHHHHHHHHHHHHHHHHhhHHhhhccccceEecCC--CeeeeccccchhhcCchhcccCCccccchhHheeccccccC
Confidence 67777666665 889999999999999999999965 9999999999887766431 1223566677777776
Q ss_pred HHHHH
Q 002039 340 ALLSA 344 (977)
Q Consensus 340 ~~~~~ 344 (977)
+=++.
T Consensus 204 gkvDv 208 (948)
T KOG0577|consen 204 GKVDV 208 (948)
T ss_pred Cccce
Confidence 65543
No 50
>cd05600 STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis.
Probab=99.35 E-value=1.9e-12 Score=146.55 Aligned_cols=143 Identities=19% Similarity=0.203 Sum_probs=93.2
Q ss_pred cccccccccEEEEEEec-CCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCcHHHH
Q 002039 124 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (977)
Q Consensus 124 ~piasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea 202 (977)
+.||+|++|+||+|+.+ +|+.||||+.+...... ... .-.+.+|.
T Consensus 7 ~~ig~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~----~~~------------------------------~~~~~~e~ 52 (333)
T cd05600 7 TQVGQGGYGQVFLAKKKDTGEIVALKRMKKSLLFK----LNE------------------------------VRHVLTER 52 (333)
T ss_pred EEEeecCCeEEEEEEECCCCCEEEEEEEEHHHHhh----hhH------------------------------HHHHHHHH
Confidence 57999999999999985 68999999876432100 000 00123344
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeee-cCCceEEeeccCCCCCCChHHHHhcCCCHHHHHHHHHHHH--H
Q 002039 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--A 279 (977)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~--l 279 (977)
..+..+.+ ...+.+-..+. ....+|||||++|.+|.++... ...+....+...+.+++ +
T Consensus 53 ~~l~~~~h-----------------~~iv~~~~~~~~~~~~~lv~e~~~g~~L~~~l~~-~~~l~~~~~~~~~~qi~~~l 114 (333)
T cd05600 53 DILTTTKS-----------------EWLVKLLYAFQDDEYLYLAMEYVPGGDFRTLLNN-LGVLSEDHARFYMAEMFEAV 114 (333)
T ss_pred HHHHhCCC-----------------CCCccEEEEEEcCCEEEEEEeCCCCCCHHHHHHH-cCCCCHHHHHHHHHHHHHHH
Confidence 43333321 00111222222 4556899999999999877431 22344444444444433 7
Q ss_pred HHHHhcCccccCCCCCCeEEccCCCCceEEEecccccccCH
Q 002039 280 HQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 320 (977)
Q Consensus 280 ~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 320 (977)
..+|..|++|+|+||.|||++.+ +.++|+|||++.....
T Consensus 115 ~~lH~~~ivH~dlkp~Nil~~~~--~~~kL~Dfg~a~~~~~ 153 (333)
T cd05600 115 DALHELGYIHRDLKPENFLIDAS--GHIKLTDFGLSKGIVT 153 (333)
T ss_pred HHHHHCCccccCCCHHHEEECCC--CCEEEEeCcCCccccc
Confidence 78999999999999999999865 8999999999876643
No 51
>cd05085 PTKc_Fer Catalytic domain of the Protein Tyrosine Kinase, Fer. Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-c
Probab=99.35 E-value=4.4e-12 Score=136.77 Aligned_cols=141 Identities=18% Similarity=0.195 Sum_probs=97.0
Q ss_pred cccccccccEEEEEEecCCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCcHHHHH
Q 002039 124 TPLATASIAQVHRATLVDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEAE 203 (977)
Q Consensus 124 ~piasaSigqV~~A~l~~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea~ 203 (977)
+.||.|++|.||+|..++++.||+|+.+........ .++.+|+.
T Consensus 1 ~~ig~g~~g~vy~~~~~~~~~~a~K~~~~~~~~~~~------------------------------------~~~~~e~~ 44 (250)
T cd05085 1 ELLGKGNFGEVFKGTLKDKTPVAVKTCKEDLPQELK------------------------------------IKFLSEAR 44 (250)
T ss_pred CccCCCCCceEEEEEecCCcEEEEEecCCcCCHHHH------------------------------------HHHHHHHH
Confidence 368999999999999888999999987654432111 12445555
Q ss_pred HHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeee-cCCceEEeeccCCCCCCChHHHHhcCCCHHHHHHHHHHHH--HH
Q 002039 204 NTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--AH 280 (977)
Q Consensus 204 n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~--l~ 280 (977)
.+.++.+ ..-+.+...+. ....++||||++|.+|.+.........+...+...+.++. +.
T Consensus 45 ~l~~l~h-----------------~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~ 107 (250)
T cd05085 45 ILKQYDH-----------------PNIVKLIGVCTQRQPIYIVMELVPGGDFLSFLRKKKDELKTKQLVKFALDAAAGMA 107 (250)
T ss_pred HHHhCCC-----------------CCcCeEEEEEecCCccEEEEECCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHH
Confidence 5544421 00111222222 4567899999999999876433233345555555555544 77
Q ss_pred HHHhcCccccCCCCCCeEEccCCCCceEEEecccccccC
Q 002039 281 QIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 319 (977)
Q Consensus 281 ~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~ 319 (977)
.+|..|++|+|+||+||+++.+ +.++|+|||++....
T Consensus 108 ~lH~~~~~H~dl~p~nili~~~--~~~~l~d~g~~~~~~ 144 (250)
T cd05085 108 YLESKNCIHRDLAARNCLVGEN--NVLKISDFGMSRQED 144 (250)
T ss_pred HHHhCCeeecccChheEEEcCC--CeEEECCCccceecc
Confidence 8899999999999999999865 889999999986543
No 52
>cd05628 STKc_NDR1 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 1. Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. NDR1 is highly expressed in thymus, mus
Probab=99.34 E-value=3.4e-12 Score=146.27 Aligned_cols=141 Identities=16% Similarity=0.207 Sum_probs=94.0
Q ss_pred cccccccccEEEEEEec-CCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCcHHHH
Q 002039 124 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (977)
Q Consensus 124 ~piasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea 202 (977)
+.||.|++|.||+|+.+ +|+.||||+.+..... ..+ ... .+..|.
T Consensus 7 ~~LG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~--~~~--------------------------~~~------~~~~E~ 52 (363)
T cd05628 7 KVIGRGAFGEVRLVQKKDTGHVYAMKILRKADML--EKE--------------------------QVG------HIRAER 52 (363)
T ss_pred EEEEeCCCEEEEEEEECCCCCEEEEEEEEHHHHH--Hhh--------------------------HHH------HHHHHH
Confidence 57999999999999874 7899999987532100 000 000 122333
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeee----cCCceEEeeccCCCCCCChHHHHhcCCCHHHHHHHHHHHH
Q 002039 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ----SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY 278 (977)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~----~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~ 278 (977)
..+.++.+ ..|++.+. ....+|||||++|.+|.+... ....++...+...+.+++
T Consensus 53 ~il~~~~~--------------------~~iv~~~~~~~~~~~~~lv~E~~~gg~L~~~l~-~~~~l~~~~~~~~~~qi~ 111 (363)
T cd05628 53 DILVEADS--------------------LWVVKMFYSFQDKLNLYLIMEFLPGGDMMTLLM-KKDTLTEEETQFYIAETV 111 (363)
T ss_pred HHHHhCCC--------------------CCcceEEEEEecCCeEEEEEcCCCCCcHHHHHH-hcCCCCHHHHHHHHHHHH
Confidence 33332211 12333332 345689999999999877643 223455555555444444
Q ss_pred --HHHHHhcCccccCCCCCCeEEccCCCCceEEEecccccccCHH
Q 002039 279 --AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSSS 321 (977)
Q Consensus 279 --l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~~ 321 (977)
+..+|..|++|||+||.|||++.+ +.++|+|||+++.+...
T Consensus 112 ~aL~~lH~~givHrDlKp~NILi~~~--~~vkL~DFGla~~~~~~ 154 (363)
T cd05628 112 LAIDSIHQLGFIHRDIKPDNLLLDSK--GHVKLSDFGLCTGLKKA 154 (363)
T ss_pred HHHHHHHhCCeEecCCCHHHeEECCC--CCEEEeeccCccccccc
Confidence 788999999999999999999865 89999999999877543
No 53
>cd05571 STKc_PKB Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having be
Probab=99.34 E-value=4e-12 Score=143.31 Aligned_cols=139 Identities=14% Similarity=0.110 Sum_probs=90.0
Q ss_pred ccccccccEEEEEEe-cCCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCcHHHHH
Q 002039 125 PLATASIAQVHRATL-VDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEAE 203 (977)
Q Consensus 125 piasaSigqV~~A~l-~~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea~ 203 (977)
.||.|++|.||+|+. .+|+.||||+.+...... ..+. ..+.+|.+
T Consensus 2 ~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~-~~~~---------------------------------~~~~~e~~ 47 (323)
T cd05571 2 LLGKGTFGKVILVREKATGKYYAMKILKKEVIIA-KDEV---------------------------------AHTLTESR 47 (323)
T ss_pred eeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhh-hHHH---------------------------------HHHHHHHH
Confidence 589999999999997 479999999876421100 0000 01223444
Q ss_pred HHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeee-cCCceEEeeccCCCCCCChHHHHhcCCCHHHHHHHHHHHH--HH
Q 002039 204 NTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--AH 280 (977)
Q Consensus 204 n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~--l~ 280 (977)
.+.++.+ ...+.+-..+. ....+|||||++|.+|.+... ....+....+...+.+++ +.
T Consensus 48 ~l~~l~h-----------------p~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~-~~~~~~~~~~~~~~~qi~~~L~ 109 (323)
T cd05571 48 VLQNTRH-----------------PFLTALKYSFQTHDRLCFVMEYANGGELFFHLS-RERVFSEDRARFYGAEIVSALG 109 (323)
T ss_pred HHHhCCC-----------------CCCCCEEEEEEcCCEEEEEEeCCCCCcHHHHHH-HcCCCCHHHHHHHHHHHHHHHH
Confidence 4433321 00111222222 455689999999999866532 222344444444444443 78
Q ss_pred HHHhcCccccCCCCCCeEEccCCCCceEEEecccccc
Q 002039 281 QIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKK 317 (977)
Q Consensus 281 ~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~ 317 (977)
.+|..|++|||+||.|||++.+ +.++|+|||++..
T Consensus 110 ~lH~~~ivHrDlkp~NIll~~~--~~~kl~DfG~a~~ 144 (323)
T cd05571 110 YLHSCDVVYRDLKLENLMLDKD--GHIKITDFGLCKE 144 (323)
T ss_pred HHHhCCeEeCCCCHHHEEECCC--CCEEEeeCCCCcc
Confidence 8999999999999999999865 8999999999865
No 54
>cd05626 STKc_LATS2 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 2. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. LATS2 is an essential mitotic regulator responsible for coordinating accurate cytokinesis completion and governing the stabilization of other mitotic regulators. It is also critical in the maintenance of proper chromosome number, genomic stability, mitotic fidelity, and the integrity of centrosome duplication. Downregulation of LATS2 is associated with po
Probab=99.33 E-value=3.2e-12 Score=147.59 Aligned_cols=139 Identities=14% Similarity=0.114 Sum_probs=90.9
Q ss_pred cccccccccEEEEEEe-cCCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCcHHHH
Q 002039 124 TPLATASIAQVHRATL-VDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (977)
Q Consensus 124 ~piasaSigqV~~A~l-~~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea 202 (977)
+.||.|++|+||+|+. .+|+.||||+.+.... .. .+. .-.+.+|.
T Consensus 7 ~~LG~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~--~~--------------------------~~~------~~~~~~E~ 52 (381)
T cd05626 7 KTLGIGAFGEVCLACKVDTHALYAMKTLRKKDV--LN--------------------------RNQ------VAHVKAER 52 (381)
T ss_pred EEEeecCCEEEEEEEECCCCCEEEEEEEEHHHh--hh--------------------------hHH------HHHHHHHH
Confidence 5699999999999987 4789999998753110 00 000 00233444
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeee----cCCceEEeeccCCCCCCChHHHHhcCCCHHHHHHHHHHHH
Q 002039 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ----SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY 278 (977)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~----~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~ 278 (977)
..+.++.+ -.|++++. ....+|||||++|++|.++.. ....++...+...+.+++
T Consensus 53 ~il~~l~h--------------------~~iv~l~~~~~~~~~~~lv~E~~~gg~L~~~l~-~~~~~~e~~~~~~~~qi~ 111 (381)
T cd05626 53 DILAEADN--------------------EWVVKLYYSFQDKDNLYFVMDYIPGGDMMSLLI-RMEVFPEVLARFYIAELT 111 (381)
T ss_pred HHHHhcCC--------------------CCeeeeEEEEecCCEEEEEEecCCCCcHHHHHH-hcCCCCHHHHHHHHHHHH
Confidence 44433321 12333332 455789999999999877642 122234333333333332
Q ss_pred --HHHHHhcCccccCCCCCCeEEccCCCCceEEEecccccccC
Q 002039 279 --AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 319 (977)
Q Consensus 279 --l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~ 319 (977)
+..+|..|++|||+||.|||++.+ ++++|+|||++..+.
T Consensus 112 ~aL~~LH~~givHrDlKp~Nili~~~--~~~kL~DFGl~~~~~ 152 (381)
T cd05626 112 LAIESVHKMGFIHRDIKPDNILIDLD--GHIKLTDFGLCTGFR 152 (381)
T ss_pred HHHHHHHhCCeeecCCcHHHEEECCC--CCEEEeeCcCCcccc
Confidence 788999999999999999999865 899999999987664
No 55
>cd05627 STKc_NDR2 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 2. Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. In addition, NDR2 plays a role in regul
Probab=99.33 E-value=4.5e-12 Score=145.08 Aligned_cols=140 Identities=17% Similarity=0.236 Sum_probs=92.8
Q ss_pred cccccccccEEEEEEec-CCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCcHHHH
Q 002039 124 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (977)
Q Consensus 124 ~piasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea 202 (977)
+.||+|++|+||+|+.+ +|+.||||+.+.... ...+ . .. .+..|.
T Consensus 7 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~--~~~~--~--------------------~~----------~~~~e~ 52 (360)
T cd05627 7 KVIGRGAFGEVRLVQKKDTGHIYAMKILRKADM--LEKE--Q--------------------VA----------HIRAER 52 (360)
T ss_pred EEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHH--hhhh--h--------------------HH----------HHHHHH
Confidence 67999999999999975 799999998763210 0000 0 00 122333
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceee---e-cCCceEEeeccCCCCCCChHHHHhcCCCHHHHHHHHHHHH
Q 002039 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVI---Q-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY 278 (977)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~---~-~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~ 278 (977)
..+..+.+ ..+++++ . ....+|||||++|.+|.+... ....++...+...+.+++
T Consensus 53 ~~l~~l~~--------------------~~iv~~~~~~~~~~~~~lv~E~~~gg~L~~~l~-~~~~l~~~~~~~~~~qi~ 111 (360)
T cd05627 53 DILVEADG--------------------AWVVKMFYSFQDKRNLYLIMEFLPGGDMMTLLM-KKDTLSEEATQFYIAETV 111 (360)
T ss_pred HHHHhCCC--------------------CCEeeEEEEEEcCCEEEEEEeCCCCccHHHHHH-hcCCCCHHHHHHHHHHHH
Confidence 33333211 1223333 2 355689999999999887643 223345444444444433
Q ss_pred --HHHHHhcCccccCCCCCCeEEccCCCCceEEEecccccccCH
Q 002039 279 --AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 320 (977)
Q Consensus 279 --l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 320 (977)
+..+|..|++|||+||+|||++.+ +.++|+|||++..+..
T Consensus 112 ~~L~~lH~~givHrDLkp~NIli~~~--~~vkL~DfG~~~~~~~ 153 (360)
T cd05627 112 LAIDAIHQLGFIHRDIKPDNLLLDAK--GHVKLSDFGLCTGLKK 153 (360)
T ss_pred HHHHHHHHCCeEccCCCHHHEEECCC--CCEEEeeccCCccccc
Confidence 788999999999999999999865 8999999999887654
No 56
>cd05593 STKc_PKB_gamma Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulate
Probab=99.33 E-value=4.7e-12 Score=143.08 Aligned_cols=140 Identities=14% Similarity=0.105 Sum_probs=90.9
Q ss_pred ccccccccEEEEEEec-CCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCcHHHHH
Q 002039 125 PLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEAE 203 (977)
Q Consensus 125 piasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea~ 203 (977)
.||+|++|+||+|+.+ +|+.||||+.++..... ..+ ...+.+|.+
T Consensus 2 ~lG~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~-~~~---------------------------------~~~~~~E~~ 47 (328)
T cd05593 2 LLGKGTFGKVILVREKASGKYYAMKILKKEVIIA-KDE---------------------------------VAHTLTESR 47 (328)
T ss_pred eeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhh-hhH---------------------------------HHHHHHHHH
Confidence 5899999999999974 79999999986432100 000 002233444
Q ss_pred HHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeee-cCCceEEeeccCCCCCCChHHHHhcCCCHHHHHHHHHHHH--HH
Q 002039 204 NTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--AH 280 (977)
Q Consensus 204 n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~--l~ 280 (977)
.+..+.+ ..-+.+-..+. ....+|||||++|.+|.+... ....++...+...+.+++ +.
T Consensus 48 ~l~~l~h-----------------p~iv~~~~~~~~~~~~~lv~Ey~~~g~L~~~l~-~~~~l~~~~~~~~~~qi~~aL~ 109 (328)
T cd05593 48 VLKNTRH-----------------PFLTSLKYSFQTKDRLCFVMEYVNGGELFFHLS-RERVFSEDRTRFYGAEIVSALD 109 (328)
T ss_pred HHHhCCC-----------------CCCcceEEEEEcCCEEEEEEeCCCCCCHHHHHH-hcCCCCHHHHHHHHHHHHHHHH
Confidence 4433321 00111112222 455689999999998865532 222345555444444443 78
Q ss_pred HHHhcCccccCCCCCCeEEccCCCCceEEEeccccccc
Q 002039 281 QIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKL 318 (977)
Q Consensus 281 ~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l 318 (977)
.+|..|++|||+||.|||++.+ +.++|+|||++...
T Consensus 110 ~LH~~~ivHrDikp~NIll~~~--~~~kL~DfG~~~~~ 145 (328)
T cd05593 110 YLHSGKIVYRDLKLENLMLDKD--GHIKITDFGLCKEG 145 (328)
T ss_pred HHHhCCeEecccCHHHeEECCC--CcEEEecCcCCccC
Confidence 8999999999999999999865 89999999998753
No 57
>cd05614 STKc_MSK2_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 2. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK2, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph
Probab=99.33 E-value=4.1e-12 Score=143.65 Aligned_cols=77 Identities=19% Similarity=0.248 Sum_probs=58.7
Q ss_pred cCCceEEeeccCCCCCCChHHHHhcCCCHHHHHHHHHHHH--HHHHHhcCccccCCCCCCeEEccCCCCceEEEeccccc
Q 002039 239 SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTK 316 (977)
Q Consensus 239 ~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~ 316 (977)
....++||||++|.+|.+... ....+....+...+.+++ +..+|..|++|||+||.|||++.+ +.++|+|||++.
T Consensus 77 ~~~~~lv~e~~~~g~L~~~l~-~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivHrDlkp~Nili~~~--~~~kl~DfG~~~ 153 (332)
T cd05614 77 EAKLHLILDYVSGGEMFTHLY-QRDNFSEDEVRFYSGEIILALEHLHKLGIVYRDIKLENILLDSE--GHVVLTDFGLSK 153 (332)
T ss_pred CCEEEEEEeCCCCCcHHHHHH-HcCCCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCHHHeEECCC--CCEEEeeCcCCc
Confidence 345689999999998876532 223355555544444443 788999999999999999999865 899999999987
Q ss_pred cc
Q 002039 317 KL 318 (977)
Q Consensus 317 ~l 318 (977)
.+
T Consensus 154 ~~ 155 (332)
T cd05614 154 EF 155 (332)
T ss_pred cc
Confidence 65
No 58
>cd05631 STKc_GRK4 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 4. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK4 has a limited tissue distribution. It is mainly found i
Probab=99.32 E-value=6.6e-12 Score=138.77 Aligned_cols=143 Identities=15% Similarity=0.135 Sum_probs=95.7
Q ss_pred cccccccccEEEEEEe-cCCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCcHHHH
Q 002039 124 TPLATASIAQVHRATL-VDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (977)
Q Consensus 124 ~piasaSigqV~~A~l-~~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea 202 (977)
+.||+|++|.||+|.. .+|+.||||+.......... .+..+.+|.
T Consensus 6 ~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~----------------------------------~~~~~~~E~ 51 (285)
T cd05631 6 RVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRK----------------------------------GEAMALNEK 51 (285)
T ss_pred EEEecCCCEEEEEEEEecCCceEEEEEeeHhhhhhhh----------------------------------hHHHHHHHH
Confidence 5699999999999997 58999999986543211000 111234455
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeee-cCCceEEeeccCCCCCCChHHHH-hcCCCHHHHHHHHHHHH--
Q 002039 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLE-AFGVNKQKVVEEITRAY-- 278 (977)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLVmE~i~G~~L~~~~~~~-~~~~~~~~l~~~l~~~~-- 278 (977)
+.+.++.+ ...+.+...+. ....++||||++|.+|.+..... ...++...+...+.+++
T Consensus 52 ~il~~l~~-----------------~~iv~~~~~~~~~~~~~lv~e~~~~g~L~~~~~~~~~~~~~~~~~~~~~~qi~~~ 114 (285)
T cd05631 52 RILEKVNS-----------------RFVVSLAYAYETKDALCLVLTIMNGGDLKFHIYNMGNPGFDEQRAIFYAAELCCG 114 (285)
T ss_pred HHHHhcCC-----------------CcEEEEEEEEccCCeEEEEEEecCCCcHHHHHHhhCCCCCCHHHHHHHHHHHHHH
Confidence 55554422 11122223332 45568999999999987653221 12355555555554544
Q ss_pred HHHHHhcCccccCCCCCCeEEccCCCCceEEEecccccccC
Q 002039 279 AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 319 (977)
Q Consensus 279 l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~ 319 (977)
+..+|..|++|+|+||.|||++.+ +.++|+|||++..++
T Consensus 115 l~~lH~~~iiH~dikp~Nill~~~--~~~kl~Dfg~~~~~~ 153 (285)
T cd05631 115 LEDLQRERIVYRDLKPENILLDDR--GHIRISDLGLAVQIP 153 (285)
T ss_pred HHHHHhCCEEeCCCCHHHEEECCC--CCEEEeeCCCcEEcC
Confidence 778999999999999999999865 889999999988764
No 59
>PLN00034 mitogen-activated protein kinase kinase; Provisional
Probab=99.32 E-value=6.5e-12 Score=143.38 Aligned_cols=136 Identities=20% Similarity=0.262 Sum_probs=90.0
Q ss_pred cccccccccEEEEEEec-CCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCcHHHH
Q 002039 124 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (977)
Q Consensus 124 ~piasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea 202 (977)
+.||.|++|.||+|+.+ +|+.||||+........... .+.+|+
T Consensus 80 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~------------------------------------~~~~E~ 123 (353)
T PLN00034 80 NRIGSGAGGTVYKVIHRPTGRLYALKVIYGNHEDTVRR------------------------------------QICREI 123 (353)
T ss_pred hhccCCCCeEEEEEEECCCCCEEEEEEEecCCcHHHHH------------------------------------HHHHHH
Confidence 57999999999999974 79999999976442211110 123454
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeee-cCCceEEeeccCCCCCCChHHHHhcCCCHHHHHHHHHHHH--H
Q 002039 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--A 279 (977)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~--l 279 (977)
+.+.++.+ ..-+.+-.++. ....++||||++|.+|.+... .+...+...+.+++ +
T Consensus 124 ~~l~~l~h-----------------~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~-----~~~~~~~~i~~qi~~aL 181 (353)
T PLN00034 124 EILRDVNH-----------------PNVVKCHDMFDHNGEIQVLLEFMDGGSLEGTHI-----ADEQFLADVARQILSGI 181 (353)
T ss_pred HHHHhCCC-----------------CCcceeeeEeccCCeEEEEEecCCCCccccccc-----CCHHHHHHHHHHHHHHH
Confidence 54444322 01122222222 455689999999998865321 12222233333332 7
Q ss_pred HHHHhcCccccCCCCCCeEEccCCCCceEEEecccccccC
Q 002039 280 HQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 319 (977)
Q Consensus 280 ~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~ 319 (977)
..+|..|++|+|+||.|||++.+ +.++|+|||++..+.
T Consensus 182 ~~LH~~~ivHrDlkp~NIll~~~--~~~kL~DfG~~~~~~ 219 (353)
T PLN00034 182 AYLHRRHIVHRDIKPSNLLINSA--KNVKIADFGVSRILA 219 (353)
T ss_pred HHHHHCCEeecCCCHHHEEEcCC--CCEEEcccccceecc
Confidence 78999999999999999999865 899999999987664
No 60
>cd05084 PTKc_Fes Catalytic domain of the Protein Tyrosine Kinase, Fes. Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular
Probab=99.32 E-value=8.4e-12 Score=134.85 Aligned_cols=141 Identities=16% Similarity=0.189 Sum_probs=93.7
Q ss_pred cccccccccEEEEEEec-CCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCcHHHH
Q 002039 124 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (977)
Q Consensus 124 ~piasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea 202 (977)
+.||.|++|+||+|+++ +|+.||||+.+........ -++.+|.
T Consensus 1 ~~lg~g~~g~vy~~~~~~~~~~~a~k~~~~~~~~~~~------------------------------------~~~~~e~ 44 (252)
T cd05084 1 ERIGRGNFGEVFSGRLRADNTPVAVKSCRETLPPDLK------------------------------------AKFLQEA 44 (252)
T ss_pred CccCcccCccEEEEEEecCCceEEEEecCccCCHHHH------------------------------------HHHHHHH
Confidence 36899999999999984 7999999986543321111 0233444
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeee-cCCceEEeeccCCCCCCChHHHHhcCCCHHHHHHHHHHHH--H
Q 002039 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--A 279 (977)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~--l 279 (977)
+.+.++.+ ...+.+-.++. ....+|||||++|.+|.++........+...+...+.++. +
T Consensus 45 ~~l~~l~h-----------------~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~qi~~~L 107 (252)
T cd05084 45 RILKQYSH-----------------PNIVRLIGVCTQKQPIYIVMELVQGGDFLTFLRTEGPRLKVKELIQMVENAAAGM 107 (252)
T ss_pred HHHHhCCC-----------------CCcceEEEEEcCCCCeEEEEeeccCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHH
Confidence 44443321 00111112222 4557899999999998876432222345555555444444 6
Q ss_pred HHHHhcCccccCCCCCCeEEccCCCCceEEEecccccccC
Q 002039 280 HQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 319 (977)
Q Consensus 280 ~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~ 319 (977)
..+|..|++|+|+||+||+++.+ +.++|+|||++..+.
T Consensus 108 ~~lH~~~i~H~dl~p~nil~~~~--~~~kl~dfg~~~~~~ 145 (252)
T cd05084 108 EYLESKHCIHRDLAARNCLVTEK--NVLKISDFGMSREEE 145 (252)
T ss_pred HHHHhCCccccccchheEEEcCC--CcEEECccccCcccc
Confidence 78899999999999999999855 889999999987654
No 61
>cd05587 STKc_cPKC Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C. Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory
Probab=99.32 E-value=5.2e-12 Score=142.38 Aligned_cols=138 Identities=14% Similarity=0.146 Sum_probs=90.6
Q ss_pred cccccccccEEEEEEec-CCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCcHHHH
Q 002039 124 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (977)
Q Consensus 124 ~piasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea 202 (977)
+.||+|++|.||+|+.+ +++.||||+.+...... ..+.. .+..|.
T Consensus 6 ~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~-~~~~~---------------------------------~~~~e~ 51 (324)
T cd05587 6 MVLGKGSFGKVMLAERKGTDELYAIKILKKDVIIQ-DDDVE---------------------------------CTMVEK 51 (324)
T ss_pred EEEeeccCeEEEEEEECCCCCEEEEEEEEHHHhhh-hhHHH---------------------------------HHHHHH
Confidence 57999999999999975 68899999976532100 00000 122343
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceee---e-cCCceEEeeccCCCCCCChHHHHhcCCCHHHHHHHHHHHH
Q 002039 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVI---Q-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY 278 (977)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~---~-~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~ 278 (977)
+.+..+.+ .-.|+.++ . ....++||||++|.+|.+... ....+....+...+.+++
T Consensus 52 ~~l~~~~~-------------------~~~i~~~~~~~~~~~~~~lv~E~~~~g~L~~~~~-~~~~~~~~~~~~~~~qi~ 111 (324)
T cd05587 52 RVLALPGK-------------------PPFLTQLHSCFQTMDRLYFVMEYVNGGDLMYHIQ-QVGKFKEPHAVFYAAEIA 111 (324)
T ss_pred HHHHhcCC-------------------CCceeeeEEEEEcCCEEEEEEcCCCCCcHHHHHH-HcCCCCHHHHHHHHHHHH
Confidence 33333211 11233332 2 355689999999999876532 122344444444444443
Q ss_pred --HHHHHhcCccccCCCCCCeEEccCCCCceEEEecccccc
Q 002039 279 --AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKK 317 (977)
Q Consensus 279 --l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~ 317 (977)
+..+|..|++|+|+||.|||++.+ +.++|+|||++..
T Consensus 112 ~al~~lH~~~ivH~dlkp~Nill~~~--~~~kL~Dfg~~~~ 150 (324)
T cd05587 112 IGLFFLHSKGIIYRDLKLDNVMLDAE--GHIKIADFGMCKE 150 (324)
T ss_pred HHHHHHHHCCeEecCCCHHHeEEcCC--CCEEEeecCccee
Confidence 788999999999999999999865 8999999999764
No 62
>KOG0193 consensus Serine/threonine protein kinase RAF [Signal transduction mechanisms]
Probab=99.32 E-value=3e-12 Score=145.66 Aligned_cols=149 Identities=13% Similarity=0.148 Sum_probs=102.3
Q ss_pred hhhcccccC-ccccccccccEEEEEEecCCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhc
Q 002039 114 MGGMFMDFV-ETPLATASIAQVHRATLVDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEA 192 (977)
Q Consensus 114 ~~~~f~~~d-~~piasaSigqV~~A~l~~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l 192 (977)
|+..++++. .++||+||||.||||+.+. +||||++.-.-...- . ++
T Consensus 387 WeIp~~ev~l~~rIGsGsFGtV~Rg~whG--dVAVK~Lnv~~pt~~--q-----------------------lq------ 433 (678)
T KOG0193|consen 387 WEIPPEEVLLGERIGSGSFGTVYRGRWHG--DVAVKLLNVDDPTPE--Q-----------------------LQ------ 433 (678)
T ss_pred cccCHHHhhccceeccccccceeeccccc--ceEEEEEecCCCCHH--H-----------------------HH------
Confidence 444444333 3799999999999999863 799998753221100 0 01
Q ss_pred ccccCcHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeeecCCceEEeeccCCCCCCChHHHHhcCCCHHHHHH
Q 002039 193 PKELDFNSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQSSETVLILEFMDGIRLNDCESLEAFGVNKQKVVE 272 (977)
Q Consensus 193 ~~Eld~~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~ 272 (977)
-|++|..++++-|+.- .+-+=-........+|+.||+|-+|.......+..++..++..
T Consensus 434 ----aFKnEVa~lkkTRH~N-----------------IlLFMG~~~~p~~AIiTqwCeGsSLY~hlHv~etkfdm~~~id 492 (678)
T KOG0193|consen 434 ----AFKNEVAVLKKTRHEN-----------------ILLFMGACMNPPLAIITQWCEGSSLYTHLHVQETKFDMNTTID 492 (678)
T ss_pred ----HHHHHHHHHhhcchhh-----------------heeeehhhcCCceeeeehhccCchhhhhccchhhhhhHHHHHH
Confidence 3667777777766520 0110000012334789999999999988766666666666655
Q ss_pred HHHHHH--HHHHHhcCccccCCCCCCeEEccCCCCceEEEeccccccc
Q 002039 273 EITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKL 318 (977)
Q Consensus 273 ~l~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l 318 (977)
+.-++. +.++|..+|+|+|+|.-||++.++ ++|+|.|||++..-
T Consensus 493 IAqQiaqGM~YLHAK~IIHrDLKSnNIFl~~~--~kVkIgDFGLatvk 538 (678)
T KOG0193|consen 493 IAQQIAQGMDYLHAKNIIHRDLKSNNIFLHED--LKVKIGDFGLATVK 538 (678)
T ss_pred HHHHHHHhhhhhhhhhhhhhhccccceEEccC--CcEEEecccceeee
Confidence 555554 788999999999999999999865 89999999998653
No 63
>KOG0597 consensus Serine-threonine protein kinase FUSED [General function prediction only]
Probab=99.32 E-value=2.3e-12 Score=144.71 Aligned_cols=139 Identities=19% Similarity=0.186 Sum_probs=92.1
Q ss_pred cccccccccEEEEEEec-CCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCcHHHH
Q 002039 124 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (977)
Q Consensus 124 ~piasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea 202 (977)
+.||.||+|.||+|+.+ +++.||+|+.... .+-..|++.++.-+++ .++.
T Consensus 8 e~iG~Gsfg~VYKgrrK~t~~~vAik~i~K~--gr~~k~l~~l~~ev~i---------------------------~r~l 58 (808)
T KOG0597|consen 8 EMIGEGSFGRVYKGRRKYTIQVVAIKFIDKS--GRNEKELKNLRQEVRI---------------------------LRSL 58 (808)
T ss_pred HHhcCCccceeeecccccceeEEEEEEehhc--CCchHHHHHHHHHHHH---------------------------HHhc
Confidence 46899999999999975 7899999986432 1223344433332222 2221
Q ss_pred --HHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeeecCCceEEeeccCCCCCCChHHHHhcC-CCHHHHHHHHHHHH-
Q 002039 203 --ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQSSETVLILEFMDGIRLNDCESLEAFG-VNKQKVVEEITRAY- 278 (977)
Q Consensus 203 --~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~~~~~vLVmE~i~G~~L~~~~~~~~~~-~~~~~l~~~l~~~~- 278 (977)
.|+..+.+.|+. +..-++|.||+.| .|..+.+ ..+ +..+.+-....+.+
T Consensus 59 kHpniv~m~esfEt------------------------~~~~~vVte~a~g-~L~~il~--~d~~lpEe~v~~~a~~LVs 111 (808)
T KOG0597|consen 59 KHPNIVEMLESFET------------------------SAHLWVVTEYAVG-DLFTILE--QDGKLPEEQVRAIAYDLVS 111 (808)
T ss_pred CCcchhhHHHhhcc------------------------cceEEEEehhhhh-hHHHHHH--hccCCCHHHHHHHHHHHHH
Confidence 133444433321 4556899999999 7766533 222 22233333333333
Q ss_pred -HHHHHhcCccccCCCCCCeEEccCCCCceEEEecccccccCH
Q 002039 279 -AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 320 (977)
Q Consensus 279 -l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 320 (977)
++.+|..++.|||+||.|||+... |.++|+|||+++..+.
T Consensus 112 aL~yLhs~rilhrd~kPqniLl~~~--~~~KlcdFg~Ar~m~~ 152 (808)
T KOG0597|consen 112 ALYYLHSNRILHRDMKPQNILLEKG--GTLKLCDFGLARAMST 152 (808)
T ss_pred HHHHHHhcCcccccCCcceeeecCC--Cceeechhhhhhhccc
Confidence 889999999999999999999854 8999999999988765
No 64
>cd05096 PTKc_DDR1 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 1. Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 1 (DDR1) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR1 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR1 binds to all collagens tested to date (types I-IV). It is widely expressed in many tissues. It is abundant in the brain and is also found in k
Probab=99.32 E-value=9.1e-12 Score=138.85 Aligned_cols=141 Identities=18% Similarity=0.209 Sum_probs=91.9
Q ss_pred cccccccccEEEEEEecC-----------------CCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHH
Q 002039 124 TPLATASIAQVHRATLVD-----------------GRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIID 186 (977)
Q Consensus 124 ~piasaSigqV~~A~l~~-----------------G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~ 186 (977)
+.||+|++|.||+|+.++ +..||||+.++.......
T Consensus 11 ~~lg~G~fg~V~~~~~~~~~~~~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~--------------------------- 63 (304)
T cd05096 11 EKLGEGQFGEVHLCEVVNPQDLPTLQFPFNVRKGRPLLVAVKILRPDANKNAR--------------------------- 63 (304)
T ss_pred eEecccCCeEEEEEEeccCcccccccccccccCCcceEEEEEEecCCCCHHHH---------------------------
Confidence 579999999999998532 347999998775432111
Q ss_pred HHhhhcccccCcHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeee-cCCceEEeeccCCCCCCChHHHHhc--
Q 002039 187 EWCKEAPKELDFNSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAF-- 263 (977)
Q Consensus 187 e~~~~l~~Eld~~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLVmE~i~G~~L~~~~~~~~~-- 263 (977)
.+|.+|.+.+.++++ ..-+.+-..+. ....+|||||++|.+|.++......
T Consensus 64 ---------~~~~~E~~~l~~l~h-----------------~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~ 117 (304)
T cd05096 64 ---------NDFLKEVKILSRLKD-----------------PNIIRLLGVCVDEDPLCMITEYMENGDLNQFLSSHHLDD 117 (304)
T ss_pred ---------HHHHHHHHHHhhcCC-----------------CCeeEEEEEEecCCceEEEEecCCCCcHHHHHHhccccc
Confidence 124455555554422 11122222222 4557899999999999876432110
Q ss_pred ----------------CCCHHHHHHHHHHHH--HHHHHhcCccccCCCCCCeEEccCCCCceEEEecccccccC
Q 002039 264 ----------------GVNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 319 (977)
Q Consensus 264 ----------------~~~~~~l~~~l~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~ 319 (977)
.+....+...+.++. +..+|..|++|+|+||.|||++.+ +.++|+|||++..+.
T Consensus 118 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~ivH~dlkp~Nill~~~--~~~kl~DfG~~~~~~ 189 (304)
T cd05096 118 KEENGNDAVPPAHCLPAISYSSLLHVALQIASGMKYLSSLNFVHRDLATRNCLVGEN--LTIKIADFGMSRNLY 189 (304)
T ss_pred cccccccccccccccccccHHHHHHHHHHHHHHHHHHHHCCccccCcchhheEEcCC--ccEEECCCccceecc
Confidence 112223333333333 778999999999999999999865 899999999987653
No 65
>cd05598 STKc_LATS Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS was originally identified in Drosophila using a screen for genes whose inactivation led to overproliferation of cells. In tetrapods, there are two LATS isoforms, LATS1 and LATS2. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. LATS functions as a tumor suppressor and is implicated in cell cycle regulation.
Probab=99.31 E-value=6.7e-12 Score=144.52 Aligned_cols=142 Identities=15% Similarity=0.153 Sum_probs=90.7
Q ss_pred cccccccccEEEEEEec-CCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCcHHHH
Q 002039 124 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (977)
Q Consensus 124 ~piasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea 202 (977)
+.||.|++|.||+|+.+ +|+.||||+.+..-.. . .+ ..-.+.+|.
T Consensus 7 ~~lG~G~~g~V~~a~~~~~~~~~avK~~~~~~~~--~--------------------------~~------~~~~~~~E~ 52 (376)
T cd05598 7 KTIGIGAFGEVCLVRKVDTNALYAMKTLRKADVL--M--------------------------RN------QAAHVKAER 52 (376)
T ss_pred EEEEeCCCeEEEEEEECCCCCEEEEEEEcHHHHH--h--------------------------hh------hHHHHHHHH
Confidence 57999999999999974 7999999987531100 0 00 000123344
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeee-cCCceEEeeccCCCCCCChHHHHhcCCCHHHHHHHHHHHH--H
Q 002039 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--A 279 (977)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~--l 279 (977)
+.+.++.+ ...+.+-..+. ....+|||||++|++|.++... ...+....+...+.+++ +
T Consensus 53 ~il~~l~h-----------------~~iv~~~~~~~~~~~~~lv~E~~~~g~L~~~i~~-~~~~~~~~~~~~~~qi~~al 114 (376)
T cd05598 53 DILAEADN-----------------EWVVKLYYSFQDKDNLYFVMDYIPGGDMMSLLIR-LGIFEEDLARFYIAELTCAI 114 (376)
T ss_pred HHHHhCCC-----------------CCcceEEEEEEcCCEEEEEEeCCCCCcHHHHHHh-cCCCCHHHHHHHHHHHHHHH
Confidence 44333321 01112222222 4566899999999999876431 12233333333333333 7
Q ss_pred HHHHhcCccccCCCCCCeEEccCCCCceEEEecccccccC
Q 002039 280 HQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 319 (977)
Q Consensus 280 ~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~ 319 (977)
..+|..|++|||+||+|||++.+ +.++|+|||++..+.
T Consensus 115 ~~lH~~~ivHrDlkp~Nill~~~--~~ikL~DFG~a~~~~ 152 (376)
T cd05598 115 ESVHKMGFIHRDIKPDNILIDRD--GHIKLTDFGLCTGFR 152 (376)
T ss_pred HHHHHCCeEeCCCCHHHEEECCC--CCEEEEeCCCCcccc
Confidence 88999999999999999999865 899999999987553
No 66
>cd05151 ChoK Choline Kinase (ChoK). The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC), and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. Bacterial ChoK is also referred to as licA protein. ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major ph
Probab=99.31 E-value=1.8e-11 Score=124.07 Aligned_cols=129 Identities=23% Similarity=0.361 Sum_probs=92.8
Q ss_pred ccccccccccEEEEEEecCCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCcHHHH
Q 002039 123 ETPLATASIAQVHRATLVDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (977)
Q Consensus 123 ~~piasaSigqV~~A~l~~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea 202 (977)
-+|++.|..++||+++. +|+.|+||+.+++.. ...++..|+
T Consensus 3 ~~~l~~G~~~~vy~~~~-~~~~~~lK~~~~~~~--------------------------------------~~~~~~~E~ 43 (170)
T cd05151 3 ISPLKGGMTNKNYRVEV-ANKKYVVRIPGNGTE--------------------------------------LLINRENEA 43 (170)
T ss_pred eeecCCcccCceEEEEE-CCeEEEEEeCCCCcc--------------------------------------cccCHHHHH
Confidence 36899999999999987 488999998665421 123566788
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeee--cCCceEEeeccCCCCCCChHHHHhcCCCHHHHHHHHHHHHHH
Q 002039 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ--SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAYAH 280 (977)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~--~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~l~ 280 (977)
+.+..+.+. ..+|+++. .+..++||||++|.++.+... .+ ......+.+. +.
T Consensus 44 ~~l~~l~~~-------------------~~~P~~~~~~~~~~~lv~e~i~G~~l~~~~~-----~~-~~~~~~l~~~-l~ 97 (170)
T cd05151 44 ENSKLAAEA-------------------GIGPKLYYFDPETGVLITEFIEGSELLTEDF-----SD-PENLEKIAKL-LK 97 (170)
T ss_pred HHHHHHHHh-------------------CCCCceEEEeCCCCeEEEEecCCCccccccc-----cC-HHHHHHHHHH-HH
Confidence 888877641 23677775 445799999999999875310 11 2233334433 55
Q ss_pred HHHhcC-----ccccCCCCCCeEEccCCCCceEEEecccccccC
Q 002039 281 QIYVDG-----FFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 319 (977)
Q Consensus 281 ~i~~~G-----~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~ 319 (977)
.+|..+ ++|+|+||+||+++ + +++++||||.+..-+
T Consensus 98 ~LH~~~~~~~~~~HgD~~~~Nil~~-~--~~~~liDf~~a~~~~ 138 (170)
T cd05151 98 KLHSSPLPDLVPCHNDLLPGNFLLD-D--GRLWLIDWEYAGMND 138 (170)
T ss_pred HHhCCCCCCceeecCCCCcCcEEEE-C--CeEEEEecccccCCC
Confidence 678776 59999999999998 3 689999999988644
No 67
>KOG0658 consensus Glycogen synthase kinase-3 [Carbohydrate transport and metabolism]
Probab=99.31 E-value=2.9e-12 Score=138.69 Aligned_cols=78 Identities=23% Similarity=0.245 Sum_probs=54.3
Q ss_pred EEeeccCCCCCCChHHHH---hcCCC---HHHHHHHHHHHHHHHHHhcCccccCCCCCCeEEccCCCCceEEEecccccc
Q 002039 244 LILEFMDGIRLNDCESLE---AFGVN---KQKVVEEITRAYAHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKK 317 (977)
Q Consensus 244 LVmE~i~G~~L~~~~~~~---~~~~~---~~~l~~~l~~~~l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~ 317 (977)
|||||++ .+|.+....- ....+ .+-....+++. +..||..||.|||+||.|+||+.+ +|.++|+|||.++.
T Consensus 99 lVleymP-~tL~~~~r~~~~~~~~mp~~~iKLYt~Qlfrg-l~yLh~~~IcHRDIKPqNlLvD~~-tg~LKicDFGSAK~ 175 (364)
T KOG0658|consen 99 LVLEYMP-ETLYRVIRHYTRANQRMPLLEIKLYTYQLFRG-LAYLHSHGICHRDIKPQNLLVDPD-TGVLKICDFGSAKV 175 (364)
T ss_pred HHHHhch-HHHHHHHHHHhhcCCCCceeeeHHHHHHHHHH-HHHHHhcCcccCCCChheEEEcCC-CCeEEeccCCccee
Confidence 7999996 4555443210 11222 22333333333 667888999999999999999976 69999999999999
Q ss_pred cCHHHHH
Q 002039 318 LSSSMKQ 324 (977)
Q Consensus 318 l~~~~r~ 324 (977)
+.+.+..
T Consensus 176 L~~~epn 182 (364)
T KOG0658|consen 176 LVKGEPN 182 (364)
T ss_pred eccCCCc
Confidence 8765433
No 68
>cd05595 STKc_PKB_beta Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B beta. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, beta (or Akt2) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-beta is the predominant PKB isoform expressed in insulin-responsive tissues. It plays a critical role in the regulation of glucose homeostasis. It is also implicated in muscle cell differentiation. Mice deficient in
Probab=99.31 E-value=5.2e-12 Score=142.37 Aligned_cols=140 Identities=14% Similarity=0.120 Sum_probs=90.9
Q ss_pred ccccccccEEEEEEe-cCCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCcHHHHH
Q 002039 125 PLATASIAQVHRATL-VDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEAE 203 (977)
Q Consensus 125 piasaSigqV~~A~l-~~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea~ 203 (977)
.||.|++|.||+|+. .+|+.||+|+.+...... ..++ ..+.+|.+
T Consensus 2 ~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~-~~~~---------------------------------~~~~~E~~ 47 (323)
T cd05595 2 LLGKGTFGKVILVREKATGRYYAMKILRKEVIIA-KDEV---------------------------------AHTVTESR 47 (323)
T ss_pred eeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhh-hHHH---------------------------------HHHHHHHH
Confidence 589999999999997 479999999876432100 0000 01233444
Q ss_pred HHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeee-cCCceEEeeccCCCCCCChHHHHhcCCCHHHHHHHHHHHH--HH
Q 002039 204 NTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--AH 280 (977)
Q Consensus 204 n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~--l~ 280 (977)
.+..+.+ ...+.+-..+. ....+|||||++|.+|.+... ....++...+...+.+++ +.
T Consensus 48 ~l~~l~h-----------------p~i~~~~~~~~~~~~~~lv~E~~~~~~L~~~l~-~~~~~~~~~~~~~~~qi~~aL~ 109 (323)
T cd05595 48 VLQNTRH-----------------PFLTALKYAFQTHDRLCFVMEYANGGELFFHLS-RERVFTEERARFYGAEIVSALE 109 (323)
T ss_pred HHHhCCC-----------------CCCcceeeEEecCCEEEEEEeCCCCCcHHHHHH-HcCCCCHHHHHHHHHHHHHHHH
Confidence 4443322 00111212222 455689999999999865532 222345555554444444 78
Q ss_pred HHHhcCccccCCCCCCeEEccCCCCceEEEeccccccc
Q 002039 281 QIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKL 318 (977)
Q Consensus 281 ~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l 318 (977)
.+|..|++|+|+||.|||++.+ +.++|+|||++...
T Consensus 110 ~LH~~~ivH~Dlkp~NIll~~~--~~~kL~Dfg~~~~~ 145 (323)
T cd05595 110 YLHSRDVVYRDIKLENLMLDKD--GHIKITDFGLCKEG 145 (323)
T ss_pred HHHHCCeEecCCCHHHEEEcCC--CCEEecccHHhccc
Confidence 8999999999999999999865 89999999987653
No 69
>PTZ00263 protein kinase A catalytic subunit; Provisional
Probab=99.31 E-value=4.3e-12 Score=143.43 Aligned_cols=144 Identities=19% Similarity=0.150 Sum_probs=93.9
Q ss_pred ccccccccccEEEEEEec-CCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCcHHH
Q 002039 123 ETPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSE 201 (977)
Q Consensus 123 ~~piasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~E 201 (977)
.+.||+|++|.||+|+.+ +|+.||||+.+..... +... . -.+.+|
T Consensus 23 ~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~----~~~~--------------------~----------~~~~~E 68 (329)
T PTZ00263 23 GETLGTGSFGRVRIAKHKGTGEYYAIKCLKKREIL----KMKQ--------------------V----------QHVAQE 68 (329)
T ss_pred EEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHHh----hhhh--------------------H----------HHHHHH
Confidence 368999999999999985 7899999987532100 0000 0 023445
Q ss_pred HHHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeee-cCCceEEeeccCCCCCCChHHHHhcCCCHHHHHHHHHHHH--
Q 002039 202 AENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY-- 278 (977)
Q Consensus 202 a~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~-- 278 (977)
...+.++.+ ..-+.+-..+. ....++||||++|.+|.+.... ...+....+...+.+++
T Consensus 69 ~~~l~~l~h-----------------p~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~-~~~~~~~~~~~~~~qi~~a 130 (329)
T PTZ00263 69 KSILMELSH-----------------PFIVNMMCSFQDENRVYFLLEFVVGGELFTHLRK-AGRFPNDVAKFYHAELVLA 130 (329)
T ss_pred HHHHHhCCC-----------------CCCCcEEEEEEcCCEEEEEEcCCCCChHHHHHHH-cCCCCHHHHHHHHHHHHHH
Confidence 555444422 01112222222 4567899999999998765331 22233333333333333
Q ss_pred HHHHHhcCccccCCCCCCeEEccCCCCceEEEecccccccCH
Q 002039 279 AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 320 (977)
Q Consensus 279 l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 320 (977)
+..+|..|++|+|+||.|||++.+ +.++|+|||++..+..
T Consensus 131 L~~LH~~~ivH~dlkp~NIll~~~--~~~kl~Dfg~~~~~~~ 170 (329)
T PTZ00263 131 FEYLHSKDIIYRDLKPENLLLDNK--GHVKVTDFGFAKKVPD 170 (329)
T ss_pred HHHHHHCCeeecCCCHHHEEECCC--CCEEEeeccCceEcCC
Confidence 788999999999999999999865 8999999999987754
No 70
>cd05594 STKc_PKB_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B alpha. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, alpha (or Akt1) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-alpha is predominantly expressed in endothelial cells. It is critical for the regulation of angiogenesis and the maintenance of vascular integrity. It also plays a role in adipocyte differentiation. Mice deficien
Probab=99.31 E-value=8.2e-12 Score=140.85 Aligned_cols=137 Identities=15% Similarity=0.136 Sum_probs=89.8
Q ss_pred ccccccccEEEEEEe-cCCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCcHHHHH
Q 002039 125 PLATASIAQVHRATL-VDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEAE 203 (977)
Q Consensus 125 piasaSigqV~~A~l-~~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea~ 203 (977)
.||+|++|+||+|+. .+|+.||||+.++..... ..+ ...+..|.+
T Consensus 2 ~lG~G~~g~V~~~~~~~~~~~~a~K~~~~~~~~~-~~~---------------------------------~~~~~~e~~ 47 (325)
T cd05594 2 LLGKGTFGKVILVKEKATGRYYAMKILKKEVIVA-KDE---------------------------------VAHTLTENR 47 (325)
T ss_pred eeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhh-hhH---------------------------------HHHHHHHHH
Confidence 589999999999987 479999999876432100 000 001223444
Q ss_pred HHHHHHHHhCCCCCCCCCCCCCCCCCCeEecee---ee-cCCceEEeeccCCCCCCChHHHHhcCCCHHHHHHHHHHHH-
Q 002039 204 NTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEV---IQ-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY- 278 (977)
Q Consensus 204 n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v---~~-~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~- 278 (977)
.+..+.+ + .|+.+ +. ....+|||||++|.+|.+... ....+....+...+.+++
T Consensus 48 ~l~~~~h------------------p--~i~~~~~~~~~~~~~~lv~E~~~~~~L~~~l~-~~~~l~~~~~~~~~~qi~~ 106 (325)
T cd05594 48 VLQNSRH------------------P--FLTALKYSFQTHDRLCFVMEYANGGELFFHLS-RERVFSEDRARFYGAEIVS 106 (325)
T ss_pred HHHhCCC------------------C--CCCceEEEEEcCCEEEEEEeCCCCCcHHHHHH-hcCCCCHHHHHHHHHHHHH
Confidence 3333221 1 12222 22 455689999999998865532 222345555555444444
Q ss_pred -HHHHHh-cCccccCCCCCCeEEccCCCCceEEEeccccccc
Q 002039 279 -AHQIYV-DGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKL 318 (977)
Q Consensus 279 -l~~i~~-~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l 318 (977)
+..+|. .|++|||+||.|||++.+ +.++|+|||++...
T Consensus 107 aL~~lH~~~~ivHrDikp~NIll~~~--~~~kL~Dfg~~~~~ 146 (325)
T cd05594 107 ALDYLHSEKNVVYRDLKLENLMLDKD--GHIKITDFGLCKEG 146 (325)
T ss_pred HHHHHHhcCCEEecCCCCCeEEECCC--CCEEEecCCCCeec
Confidence 788896 799999999999999865 89999999998653
No 71
>cd05584 STKc_p70S6K Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase. Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the in
Probab=99.31 E-value=5.9e-12 Score=141.93 Aligned_cols=142 Identities=19% Similarity=0.182 Sum_probs=90.2
Q ss_pred cccccccccEEEEEEe----cCCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCcH
Q 002039 124 TPLATASIAQVHRATL----VDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFN 199 (977)
Q Consensus 124 ~piasaSigqV~~A~l----~~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~ 199 (977)
+.||+|++|.||+|+. .+|+.||||+.+.... ..+.. ....+.
T Consensus 2 ~~lg~G~~g~V~~~~~~~~~~~~~~~avK~~~~~~~---~~~~~------------------------------~~~~~~ 48 (323)
T cd05584 2 KVLGKGGYGKVFQVRKVTGADTGKIFAMKVLKKATI---VRNQK------------------------------DTAHTK 48 (323)
T ss_pred ceeeecCCeEEEEEEEcccCCCCCEEEEEEEEHHHH---Hhhhh------------------------------hHHHHH
Confidence 4689999999999986 3688999998753211 00000 001233
Q ss_pred HHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeee-cCCceEEeeccCCCCCCChHHHHhcCCCHHHHHHHHHHHH
Q 002039 200 SEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY 278 (977)
Q Consensus 200 ~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~ 278 (977)
.|...+..+.+ ..-+.+-..+. ....++||||++|.+|.+.... ...+....+...+.+++
T Consensus 49 ~E~~il~~l~h-----------------p~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~-~~~~~~~~~~~~~~qi~ 110 (323)
T cd05584 49 AERNILEAVKH-----------------PFIVDLIYAFQTGGKLYLILEYLSGGELFMHLER-EGIFMEDTACFYLSEIS 110 (323)
T ss_pred HHHHHHHhCCC-----------------CchhceeeEEecCCeEEEEEeCCCCchHHHHHHH-cCCCCHHHHHHHHHHHH
Confidence 45555444422 00111222222 4556899999999998765321 12233333333333333
Q ss_pred --HHHHHhcCccccCCCCCCeEEccCCCCceEEEeccccccc
Q 002039 279 --AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKL 318 (977)
Q Consensus 279 --l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l 318 (977)
+..+|..|++|+|+||.|||++.+ +.++|+|||+++..
T Consensus 111 ~~l~~lH~~~ivH~dlkp~Nil~~~~--~~~kl~Dfg~~~~~ 150 (323)
T cd05584 111 LALEHLHQQGIIYRDLKPENILLDAQ--GHVKLTDFGLCKES 150 (323)
T ss_pred HHHHHHHHCCeecCCCCHHHeEECCC--CCEEEeeCcCCeec
Confidence 788999999999999999999865 89999999998643
No 72
>cd05621 STKc_ROCK2 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 2. Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK2 was the first identified target of activated RhoA, and was found
Probab=99.31 E-value=6.8e-12 Score=144.25 Aligned_cols=142 Identities=17% Similarity=0.160 Sum_probs=92.3
Q ss_pred cccccccccEEEEEEec-CCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCcHHHH
Q 002039 124 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (977)
Q Consensus 124 ~piasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea 202 (977)
+.||.|++|.||+|+.+ +|+.||+|+........ ..+. -.+..|.
T Consensus 49 ~~lG~G~fg~Vy~~~~~~~~~~~aiK~~~~~~~~~-~~~~---------------------------------~~~~~e~ 94 (370)
T cd05621 49 KVIGRGAFGEVQLVRHKSSQKVYAMKLLSKFEMIK-RSDS---------------------------------AFFWEER 94 (370)
T ss_pred EEEEecCCeEEEEEEECCCCCEEEEEEEEHHHhhh-hhhH---------------------------------HHHHHHH
Confidence 56999999999999985 68999999874210000 0000 0122333
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeee-cCCceEEeeccCCCCCCChHHHHhcCCCHHHHHHHHHHHH--H
Q 002039 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--A 279 (977)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~--l 279 (977)
..+..+.+ ...+.+-..+. ....++||||++|++|.++. ....++...+...+.+++ +
T Consensus 95 ~i~~~~~h-----------------p~iv~~~~~~~~~~~~~lv~Ey~~gg~L~~~l--~~~~~~~~~~~~~~~qil~aL 155 (370)
T cd05621 95 DIMAFANS-----------------PWVVQLFCAFQDDKYLYMVMEYMPGGDLVNLM--SNYDVPEKWAKFYTAEVVLAL 155 (370)
T ss_pred HHHHhCCC-----------------CCEeeEEEEEEcCCEEEEEEcCCCCCcHHHHH--HhcCCCHHHHHHHHHHHHHHH
Confidence 33322211 11122222222 45578999999999998764 333455444444444433 7
Q ss_pred HHHHhcCccccCCCCCCeEEccCCCCceEEEecccccccCH
Q 002039 280 HQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 320 (977)
Q Consensus 280 ~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 320 (977)
..+|..|++|||+||+|||++.+ +.++|+|||++..+..
T Consensus 156 ~~LH~~~IvHrDLKp~NILl~~~--~~~kL~DFG~a~~~~~ 194 (370)
T cd05621 156 DAIHSMGLIHRDVKPDNMLLDKH--GHLKLADFGTCMKMDE 194 (370)
T ss_pred HHHHHCCeEecCCCHHHEEECCC--CCEEEEecccceeccc
Confidence 88999999999999999999865 8999999999887643
No 73
>cd05601 STKc_CRIK Catalytic domain of the Protein Serine/Threonine Kinase, Citron Rho-interacting kinase. Serine/Threonine Kinases (STKs), Citron Rho-interacting kinase (CRIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CRIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CRIK is also called citron kinase. It contains a catalytic domain, a central coiled-coil domain, and a C-terminal region containing a Rho-binding domain (RBD), a zinc finger, and a pleckstrin homology (PH) domain, in addition to other motifs. CRIK, an effector of the small GTPase Rho, plays an important function during cytokinesis and affects its contractile process. CRIK-deficient mice show severe ataxia and epilepsy as a result of abnor
Probab=99.31 E-value=7.9e-12 Score=141.21 Aligned_cols=141 Identities=18% Similarity=0.244 Sum_probs=92.8
Q ss_pred cccccccccEEEEEEec-CCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCcHHHH
Q 002039 124 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (977)
Q Consensus 124 ~piasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea 202 (977)
+.||.|++|.||+|+.+ +|+.||||+.+...... .... -.+..|.
T Consensus 7 ~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~-~~~~---------------------------------~~~~~e~ 52 (330)
T cd05601 7 SLVGRGHFGEVQVVREKATGDIYAMKVMKKSVLLA-QETV---------------------------------SFFEEER 52 (330)
T ss_pred EEEEeccCEEEEEEEECCCCCEEEEEEEEHHHhhh-hhHH---------------------------------HHHHHHH
Confidence 57999999999999974 79999999876421100 0000 0122233
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceee---e-cCCceEEeeccCCCCCCChHHHHhcCCCHHHHHHHHHHHH
Q 002039 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVI---Q-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY 278 (977)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~---~-~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~ 278 (977)
..+..+.+ -.|+.++ . ....+|||||++|.+|.++.......++...+...+.+++
T Consensus 53 ~i~~~~~~--------------------~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~l~~~~~~~~~~qi~ 112 (330)
T cd05601 53 DILSISNS--------------------PWIPQLQYAFQDKDNLYLVMEYQPGGDLLSLLNRYEDQFDEDMAQFYLAELV 112 (330)
T ss_pred HHHHhCCC--------------------CCCcceeeEEecCCeEEEEECCCCCCCHHHHHHHhcCCCCHHHHHHHHHHHH
Confidence 32222111 1122222 2 4556899999999999877443223455554444444433
Q ss_pred --HHHHHhcCccccCCCCCCeEEccCCCCceEEEecccccccCH
Q 002039 279 --AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 320 (977)
Q Consensus 279 --l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 320 (977)
+..+|..|++|+|+||.|||++.+ +.++|+|||++..+..
T Consensus 113 ~aL~~lH~~~i~H~Dlkp~NIll~~~--~~~kL~Dfg~a~~~~~ 154 (330)
T cd05601 113 LAIHSVHQMGYVHRDIKPENVLIDRT--GHIKLADFGSAARLTA 154 (330)
T ss_pred HHHHHHHHCCeEcccCchHheEECCC--CCEEeccCCCCeECCC
Confidence 788999999999999999999865 8999999999987653
No 74
>cd05590 STKc_nPKC_eta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signal
Probab=99.30 E-value=8.9e-12 Score=140.29 Aligned_cols=77 Identities=17% Similarity=0.183 Sum_probs=58.5
Q ss_pred cCCceEEeeccCCCCCCChHHHHhcCCCHHHHHHHHHHHH--HHHHHhcCccccCCCCCCeEEccCCCCceEEEeccccc
Q 002039 239 SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTK 316 (977)
Q Consensus 239 ~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~ 316 (977)
....++||||++|.+|.+... ....++...+...+.+++ +..+|..|++|||+||.|||++.+ +.++|+|||++.
T Consensus 68 ~~~~~iv~Ey~~~g~L~~~i~-~~~~l~~~~~~~~~~ql~~~L~~lH~~~ivH~dlkp~NIli~~~--~~~kL~DfG~~~ 144 (320)
T cd05590 68 PDRLFFVMEFVNGGDLMFHIQ-KSRRFDEARARFYAAEITSALMFLHDKGIIYRDLKLDNVLLDHE--GHCKLADFGMCK 144 (320)
T ss_pred CCEEEEEEcCCCCchHHHHHH-HcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeCCCCHHHeEECCC--CcEEEeeCCCCe
Confidence 455689999999998876532 223355555544444443 788999999999999999999865 899999999987
Q ss_pred cc
Q 002039 317 KL 318 (977)
Q Consensus 317 ~l 318 (977)
..
T Consensus 145 ~~ 146 (320)
T cd05590 145 EG 146 (320)
T ss_pred ec
Confidence 53
No 75
>cd05612 STKc_PRKX_like Catalytic domain of PRKX-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyt
Probab=99.30 E-value=6e-12 Score=139.60 Aligned_cols=140 Identities=19% Similarity=0.174 Sum_probs=90.9
Q ss_pred cccccccccEEEEEEec-CCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCcHHHH
Q 002039 124 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (977)
Q Consensus 124 ~piasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea 202 (977)
+.||+|++|.||+|+.+ +|+.||||+........ .+. .-.+.+|.
T Consensus 7 ~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~----~~~------------------------------~~~~~~E~ 52 (291)
T cd05612 7 KTVGTGTFGRVHLVRDRISEHYYALKVMAIPEVIR----LKQ------------------------------EQHVHNEK 52 (291)
T ss_pred eeeecCCCeEEEEEEEcCCCCEEEEEEEEHHHHhh----hHH------------------------------HHHHHHHH
Confidence 57999999999999975 79999999875321100 000 00122333
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeee----cCCceEEeeccCCCCCCChHHHHhcCCCHHHHHHHHHHHH
Q 002039 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ----SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY 278 (977)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~----~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~ 278 (977)
..+.++.+ ..|.+++. ....++||||++|.+|.+.... ...+....+...+.+++
T Consensus 53 ~~l~~l~h--------------------p~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~-~~~~~~~~~~~~~~qi~ 111 (291)
T cd05612 53 RVLKEVSH--------------------PFIIRLFWTEHDQRFLYMLMEYVPGGELFSYLRN-SGRFSNSTGLFYASEIV 111 (291)
T ss_pred HHHHhCCC--------------------CcHhhhHhhhccCCeEEEEEeCCCCCCHHHHHHH-cCCCCHHHHHHHHHHHH
Confidence 33333211 11222221 3445799999999998776432 22344444444444433
Q ss_pred --HHHHHhcCccccCCCCCCeEEccCCCCceEEEecccccccCH
Q 002039 279 --AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 320 (977)
Q Consensus 279 --l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 320 (977)
+..+|..|++|+|+||.|||++.+ +.++|+|||++..+..
T Consensus 112 ~~l~~lH~~~i~H~dlkp~NIli~~~--~~~kl~Dfg~~~~~~~ 153 (291)
T cd05612 112 CALEYLHSKEIVYRDLKPENILLDKE--GHIKLTDFGFAKKLRD 153 (291)
T ss_pred HHHHHHHHCCeeecCCCHHHeEECCC--CCEEEEecCcchhccC
Confidence 788999999999999999999865 8999999999876643
No 76
>cd05102 PTKc_VEGFR3 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 3. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 3 (VEGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR3 (or Flt4) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. V
Probab=99.30 E-value=6e-12 Score=142.60 Aligned_cols=49 Identities=16% Similarity=0.216 Sum_probs=39.2
Q ss_pred HHHHHHHHHH--HHHHHhcCccccCCCCCCeEEccCCCCceEEEecccccccC
Q 002039 269 KVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 319 (977)
Q Consensus 269 ~l~~~l~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~ 319 (977)
.+...+.++. +..+|..|++|||+||.|||++.+ +.++|+|||+++.+.
T Consensus 175 ~~~~~~~qi~~aL~~LH~~~ivHrDiKp~Nil~~~~--~~~kl~DfG~a~~~~ 225 (338)
T cd05102 175 DLICYSFQVARGMEFLASRKCIHRDLAARNILLSEN--NVVKICDFGLARDIY 225 (338)
T ss_pred HHHHHHHHHHHHHHHHHHCCEECCCCccceEEEcCC--CcEEEeecccccccc
Confidence 3333334433 788999999999999999999865 899999999998664
No 77
>cd05591 STKc_nPKC_epsilon Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C epsilon. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), epsilon isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to
Probab=99.30 E-value=1.1e-11 Score=139.65 Aligned_cols=77 Identities=16% Similarity=0.163 Sum_probs=57.7
Q ss_pred cCCceEEeeccCCCCCCChHHHHhcCCCHHHHHHHHHHHH--HHHHHhcCccccCCCCCCeEEccCCCCceEEEeccccc
Q 002039 239 SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTK 316 (977)
Q Consensus 239 ~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~ 316 (977)
....+|||||++|.+|.+... ....++...+...+.+++ +..+|..|++|||+||.|||++.+ +.++|+|||++.
T Consensus 68 ~~~~~lv~E~~~~~~L~~~l~-~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDikp~Nill~~~--~~~kL~Dfg~~~ 144 (321)
T cd05591 68 KDRLFFVMEYVNGGDLMFQIQ-RSRKFDEPRSRFYAAEVTLALMFLHRHGVIYRDLKLDNILLDAE--GHCKLADFGMCK 144 (321)
T ss_pred CCeEEEEEeCCCCCcHHHHHH-HcCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHeEECCC--CCEEEeecccce
Confidence 345689999999998875532 222344444444444433 788999999999999999999865 899999999987
Q ss_pred cc
Q 002039 317 KL 318 (977)
Q Consensus 317 ~l 318 (977)
..
T Consensus 145 ~~ 146 (321)
T cd05591 145 EG 146 (321)
T ss_pred ec
Confidence 53
No 78
>cd05625 STKc_LATS1 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 1. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. Promoter methylation, loss of heterozygosity, and missense mutations targeting the LATS1 gene have also been found in human sarcomas and ovarian cancers. In addition, decreased expression of LATS1 is associated with an aggressive phenotype an
Probab=99.30 E-value=1e-11 Score=143.44 Aligned_cols=138 Identities=15% Similarity=0.151 Sum_probs=89.8
Q ss_pred cccccccccEEEEEEe-cCCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCcHHHH
Q 002039 124 TPLATASIAQVHRATL-VDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (977)
Q Consensus 124 ~piasaSigqV~~A~l-~~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea 202 (977)
+.||.|++|+||+|+. .+++.||||+.+.... .. .. . .-.+.+|.
T Consensus 7 ~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~--~~--~~------------------------~------~~~~~~E~ 52 (382)
T cd05625 7 KTLGIGAFGEVCLARKVDTKALYAMKTLRKKDV--LL--RN------------------------Q------VAHVKAER 52 (382)
T ss_pred EEEEeCCCEEEEEEEECCCCCEEEEEEEeHHHh--hh--HH------------------------H------HHHHHHHH
Confidence 5799999999999997 4789999998753210 00 00 0 00123344
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceee---e-cCCceEEeeccCCCCCCChHHHHhcCCCHHHHHHHHHHHH
Q 002039 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVI---Q-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY 278 (977)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~---~-~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~ 278 (977)
+.+.++.+ -.|.+++ . ....+|||||++|++|.++.. +...+....+...+.+++
T Consensus 53 ~il~~~~h--------------------~~iv~~~~~~~~~~~~~lv~E~~~gg~L~~~l~-~~~~~~e~~~~~~~~qi~ 111 (382)
T cd05625 53 DILAEADN--------------------EWVVRLYYSFQDKDNLYFVMDYIPGGDMMSLLI-RMGIFPEDLARFYIAELT 111 (382)
T ss_pred HHHHhCCC--------------------CcCCeEEEEEEeCCEEEEEEeCCCCCcHHHHHH-hcCCCCHHHHHHHHHHHH
Confidence 44333321 1223333 2 455689999999998877632 112233333333333333
Q ss_pred --HHHHHhcCccccCCCCCCeEEccCCCCceEEEeccccccc
Q 002039 279 --AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKL 318 (977)
Q Consensus 279 --l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l 318 (977)
+..+|..|++|||+||.|||++.+ +.++|+|||++..+
T Consensus 112 ~al~~lH~~~ivHrDlKp~NILl~~~--g~~kL~DFGla~~~ 151 (382)
T cd05625 112 CAVESVHKMGFIHRDIKPDNILIDRD--GHIKLTDFGLCTGF 151 (382)
T ss_pred HHHHHHHhCCeecCCCCHHHEEECCC--CCEEEeECCCCccc
Confidence 788999999999999999999865 89999999998654
No 79
>cd07869 STKc_PFTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase. Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 an
Probab=99.30 E-value=7e-12 Score=139.76 Aligned_cols=139 Identities=21% Similarity=0.225 Sum_probs=91.1
Q ss_pred cccccccccEEEEEEec-CCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCcHHHH
Q 002039 124 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (977)
Q Consensus 124 ~piasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea 202 (977)
+.||.|++|.||+|+.+ +|+.||||+.+...... ....+.+|+
T Consensus 11 ~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~------------------------------------~~~~~~~E~ 54 (303)
T cd07869 11 EKLGEGSYATVYKGKSKVNGKLVALKVIRLQEEEG------------------------------------TPFTAIREA 54 (303)
T ss_pred eeEEecCCEEEEEEEECCCCCEEEEEEeccccccc------------------------------------cchhHHHHH
Confidence 67999999999999985 79999999875321100 011233455
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeee-cCCceEEeeccCCCCCCChHHHHhcCCCHHHHHHHHHHHH--H
Q 002039 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--A 279 (977)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~--l 279 (977)
..+.++.+ ...+.+..++. ....++||||++| .+.+........+....+...+.+++ +
T Consensus 55 ~~l~~l~h-----------------~niv~~~~~~~~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~qi~~al 116 (303)
T cd07869 55 SLLKGLKH-----------------ANIVLLHDIIHTKETLTLVFEYVHT-DLCQYMDKHPGGLHPENVKLFLFQLLRGL 116 (303)
T ss_pred HHHhhCCC-----------------CCcCeEEEEEecCCeEEEEEECCCc-CHHHHHHhCCCCCCHHHHHHHHHHHHHHH
Confidence 54444322 11223333333 4557899999976 33332221223355555555555544 7
Q ss_pred HHHHhcCccccCCCCCCeEEccCCCCceEEEeccccccc
Q 002039 280 HQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKL 318 (977)
Q Consensus 280 ~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l 318 (977)
..+|..|++|+|+||+|||++.+ +.++|+|||++...
T Consensus 117 ~~lH~~~ivH~dlkp~Nill~~~--~~~kl~Dfg~~~~~ 153 (303)
T cd07869 117 SYIHQRYILHRDLKPQNLLISDT--GELKLADFGLARAK 153 (303)
T ss_pred HHHHHCCeecCCCCHHHEEECCC--CCEEECCCCcceec
Confidence 88999999999999999999865 89999999998654
No 80
>cd05624 STKc_MRCK_beta Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase beta. Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) beta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKbeta is expressed ubiquitously in many tissues.
Probab=99.29 E-value=1.2e-11 Score=140.04 Aligned_cols=80 Identities=20% Similarity=0.172 Sum_probs=60.1
Q ss_pred cCCceEEeeccCCCCCCChHHHHhcCCCHHHHHHHHHHHH--HHHHHhcCccccCCCCCCeEEccCCCCceEEEeccccc
Q 002039 239 SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTK 316 (977)
Q Consensus 239 ~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~ 316 (977)
....+|||||++|++|.++.......+....+...+.+++ ++.+|..|++|+|+||+|||++.+ +.++|+|||++.
T Consensus 73 ~~~~~lv~Ey~~gg~L~~~l~~~~~~l~~~~~~~~~~qi~~~L~~lH~~~iiHrDlkp~Nill~~~--~~~kl~DfG~a~ 150 (331)
T cd05624 73 ENYLYLVMDYYVGGDLLTLLSKFEDRLPEDMARFYIAEMVLAIHSIHQLHYVHRDIKPDNVLLDMN--GHIRLADFGSCL 150 (331)
T ss_pred CCEEEEEEeCCCCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCchHHEEEcCC--CCEEEEecccee
Confidence 4556899999999999887543223344444443333333 788899999999999999999855 899999999987
Q ss_pred ccCH
Q 002039 317 KLSS 320 (977)
Q Consensus 317 ~l~~ 320 (977)
.+..
T Consensus 151 ~~~~ 154 (331)
T cd05624 151 KMNQ 154 (331)
T ss_pred eccC
Confidence 7643
No 81
>cd05615 STKc_cPKC_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C alpha. Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, a
Probab=99.29 E-value=7.5e-12 Score=141.11 Aligned_cols=139 Identities=14% Similarity=0.133 Sum_probs=90.7
Q ss_pred cccccccccEEEEEEec-CCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCcHHHH
Q 002039 124 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (977)
Q Consensus 124 ~piasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea 202 (977)
+.||.|++|+||+|+.+ +|+.||||+.+...... ..+. -.+..|.
T Consensus 6 ~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~-~~~~---------------------------------~~~~~e~ 51 (323)
T cd05615 6 MVLGKGSFGKVMLAERKGTDELYAIKILKKDVVIQ-DDDV---------------------------------ECTMVEK 51 (323)
T ss_pred EEEEecCCeEEEEEEECCCCCEEEEEEEEHHHhhh-hhHH---------------------------------HHHHHHH
Confidence 57999999999999974 79999999876421100 0000 0122333
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceee---e-cCCceEEeeccCCCCCCChHHHHhcCCCHHHHHHHHHHHH
Q 002039 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVI---Q-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY 278 (977)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~---~-~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~ 278 (977)
+.+..+.+ .-.|+.++ . ....+|||||++|.+|.+... ....++...+...+.+++
T Consensus 52 ~~l~~~~~-------------------~~~i~~~~~~~~~~~~~~lv~Ey~~~g~L~~~i~-~~~~l~~~~~~~i~~qi~ 111 (323)
T cd05615 52 RVLALQDK-------------------PPFLTQLHSCFQTVDRLYFVMEYVNGGDLMYHIQ-QVGKFKEPQAVFYAAEIS 111 (323)
T ss_pred HHHHhccC-------------------CCchhheeeEEecCCEEEEEEcCCCCCcHHHHHH-HcCCCCHHHHHHHHHHHH
Confidence 33322211 11122222 2 345689999999998876532 122345555555555544
Q ss_pred --HHHHHhcCccccCCCCCCeEEccCCCCceEEEeccccccc
Q 002039 279 --AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKL 318 (977)
Q Consensus 279 --l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l 318 (977)
+..+|..|++|+|+||+|||++.+ +.++|+|||++...
T Consensus 112 ~al~~lH~~~ivHrDikp~Nill~~~--~~ikL~Dfg~~~~~ 151 (323)
T cd05615 112 VGLFFLHRRGIIYRDLKLDNVMLDSE--GHIKIADFGMCKEH 151 (323)
T ss_pred HHHHHHHHCCeeccCCCHHHeEECCC--CCEEEecccccccc
Confidence 788999999999999999999865 89999999998754
No 82
>cd05585 STKc_YPK1_like Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It pl
Probab=99.29 E-value=1e-11 Score=139.19 Aligned_cols=138 Identities=17% Similarity=0.096 Sum_probs=90.0
Q ss_pred cccccccEEEEEEec-CCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCcHHHHHH
Q 002039 126 LATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEAEN 204 (977)
Q Consensus 126 iasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea~n 204 (977)
||.|++|.||+|+.+ +|+.||||+.+...... ..+ ...+..|...
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~~~-~~~---------------------------------~~~~~~E~~~ 46 (312)
T cd05585 1 IGKGSFGKVMQVRKRDTQRIYALKTIRKAHIVS-RSE---------------------------------VTHTLAERTV 46 (312)
T ss_pred CCcCCCeEEEEEEECCCCCEEEEEEEEHHHhhh-hhH---------------------------------HHHHHHHHHH
Confidence 689999999999975 68999999875321000 000 0012334444
Q ss_pred HHHHHHHhCCCCCCCCCCCCCCCCCC-eEeceeee-cCCceEEeeccCCCCCCChHHHHhcCCCHHHHHHHHHHHH--HH
Q 002039 205 TRIVSANLGCKNKHEDSNKKPAYEVD-VLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--AH 280 (977)
Q Consensus 205 ~~~~~~~~~~~~~~~~~~~~~~~~~~-v~vP~v~~-~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~--l~ 280 (977)
+.++.+ +. +.+-..+. ....++||||++|.+|.+.... ...++...+...+.+++ +.
T Consensus 47 l~~l~h------------------~~iv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~-~~~~~~~~~~~~~~qi~~~l~ 107 (312)
T cd05585 47 LAQVNC------------------PFIVPLKFSFQSPEKLYLVLAFINGGELFHHLQR-EGRFDLSRARFYTAELLCALE 107 (312)
T ss_pred HHhCCC------------------CcEeceeeEEecCCeEEEEEcCCCCCcHHHHHHh-cCCCCHHHHHHHHHHHHHHHH
Confidence 444321 11 11112222 4567899999999998766432 22345444444444433 78
Q ss_pred HHHhcCccccCCCCCCeEEccCCCCceEEEeccccccc
Q 002039 281 QIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKL 318 (977)
Q Consensus 281 ~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l 318 (977)
.+|..|++|||+||.|||++.+ +.++|+|||++...
T Consensus 108 ~lH~~~i~HrDlkp~Nili~~~--~~~kl~Dfg~~~~~ 143 (312)
T cd05585 108 NLHKFNVIYRDLKPENILLDYQ--GHIALCDFGLCKLN 143 (312)
T ss_pred HHHhCCeEeCCCCHHHeEECCC--CcEEEEECcccccC
Confidence 8999999999999999999865 89999999998754
No 83
>cd05597 STKc_DMPK_like Catalytic domain of Myotonic Dystrophy protein kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Myotonic Dystrophy protein kinase (DMPK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The DMPK-like subfamily is composed of DMPK and DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK). Three isoforms of MRCK are known, named alpha, beta and gamma. The DMPK gene is implicated in myotonic dystrophy 1 (DM1), an inherited multisystemic disorder with symptoms that include muscle hyperexcitability, progressive muscle weakness and wasting, cataract development, testicular atrophy,
Probab=99.29 E-value=1e-11 Score=140.51 Aligned_cols=141 Identities=16% Similarity=0.144 Sum_probs=91.9
Q ss_pred cccccccccEEEEEEec-CCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCcHHHH
Q 002039 124 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (977)
Q Consensus 124 ~piasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea 202 (977)
+.||+|++|+||+|+.+ +|+.||||+.+..-... ..+. -.+..|.
T Consensus 7 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~-~~~~---------------------------------~~~~~e~ 52 (331)
T cd05597 7 KVIGRGAFGEVAVVKMKNTGQVYAMKILNKWEMLK-RAET---------------------------------ACFREER 52 (331)
T ss_pred EEEEecCCeEEEEEEECCCCCEEEEEEEEHHHHhh-hhhH---------------------------------HHHHHHH
Confidence 57999999999999974 79999999875310000 0000 0122333
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceee---e-cCCceEEeeccCCCCCCChHHHHhcCCCHHHHHHHHHHHH
Q 002039 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVI---Q-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY 278 (977)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~---~-~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~ 278 (977)
..+..+.+ -.|+.++ . ....++||||++|.+|.++.......+....+...+.+++
T Consensus 53 ~~l~~~~~--------------------~~i~~~~~~~~~~~~~~lv~e~~~g~~L~~~l~~~~~~~~~~~~~~~~~qi~ 112 (331)
T cd05597 53 DVLVNGDR--------------------RWITNLHYAFQDENNLYLVMDYYVGGDLLTLLSKFEDRLPEDMARFYLAEMV 112 (331)
T ss_pred HHHHhCCC--------------------CCCCceEEEEecCCeEEEEEecCCCCcHHHHHHHhcCCCCHHHHHHHHHHHH
Confidence 33322211 1222222 2 3456899999999999877532223344444444444433
Q ss_pred --HHHHHhcCccccCCCCCCeEEccCCCCceEEEecccccccCH
Q 002039 279 --AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 320 (977)
Q Consensus 279 --l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 320 (977)
+..+|..|++|+|+||.|||++.+ +.++|+|||++..+..
T Consensus 113 ~~l~~lH~~~ivH~dlkp~Nill~~~--~~~kl~Dfg~~~~~~~ 154 (331)
T cd05597 113 LAIDSVHQLGYVHRDIKPDNVLLDKN--GHIRLADFGSCLRLLA 154 (331)
T ss_pred HHHHHHHhCCeEECCCCHHHEEECCC--CCEEEEECCceeecCC
Confidence 788999999999999999999865 8999999999876643
No 84
>cd05620 STKc_nPKC_delta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. I
Probab=99.29 E-value=7e-12 Score=140.89 Aligned_cols=76 Identities=16% Similarity=0.218 Sum_probs=57.7
Q ss_pred cCCceEEeeccCCCCCCChHHHHhcCCCHHHHHHHHHHHH--HHHHHhcCccccCCCCCCeEEccCCCCceEEEeccccc
Q 002039 239 SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTK 316 (977)
Q Consensus 239 ~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~ 316 (977)
....+|||||++|.+|.+... .....+...+...+.+++ +..+|..|++|||+||+|||++.+ +.++|+|||++.
T Consensus 68 ~~~~~lv~E~~~~g~L~~~i~-~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivHrDlkp~Nil~~~~--~~~kl~Dfg~~~ 144 (316)
T cd05620 68 KEHLFFVMEFLNGGDLMFHIQ-DKGRFDLYRATFYAAEIVCGLQFLHSKGIIYRDLKLDNVMLDRD--GHIKIADFGMCK 144 (316)
T ss_pred CCEEEEEECCCCCCcHHHHHH-HcCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHeEECCC--CCEEeCccCCCe
Confidence 355689999999998876532 222345555444444444 788999999999999999999865 899999999876
Q ss_pred c
Q 002039 317 K 317 (977)
Q Consensus 317 ~ 317 (977)
.
T Consensus 145 ~ 145 (316)
T cd05620 145 E 145 (316)
T ss_pred e
Confidence 4
No 85
>cd07871 STKc_PCTAIRE3 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filament
Probab=99.29 E-value=8.6e-12 Score=138.07 Aligned_cols=139 Identities=16% Similarity=0.136 Sum_probs=89.1
Q ss_pred cccccccccEEEEEEec-CCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCcHHHH
Q 002039 124 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (977)
Q Consensus 124 ~piasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea 202 (977)
+.||.|++|.||+|+.+ +|+.||||+.+...... ....+.+|.
T Consensus 11 ~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~------------------------------------~~~~~~~E~ 54 (288)
T cd07871 11 DKLGEGTYATVFKGRSKLTENLVALKEIRLEHEEG------------------------------------APCTAIREV 54 (288)
T ss_pred eEEecCCCEEEEEEEECCCCCEEEEEEecccccCC------------------------------------cchhHHHHH
Confidence 57999999999999975 78999999875321100 001233455
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeee-cCCceEEeeccCCCCCCChHHHHhcCCCHHHHHHHHHHHH--H
Q 002039 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--A 279 (977)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~--l 279 (977)
+.+.++.+ ..-+.+-.++. ....++||||++| +|.+.............+...+.++. +
T Consensus 55 ~~l~~l~h-----------------~niv~~~~~~~~~~~~~lv~e~~~~-~l~~~l~~~~~~~~~~~~~~~~~qi~~aL 116 (288)
T cd07871 55 SLLKNLKH-----------------ANIVTLHDIIHTERCLTLVFEYLDS-DLKQYLDNCGNLMSMHNVKIFMFQLLRGL 116 (288)
T ss_pred HHHHhCCC-----------------CCEeeEEEEEcCCCeEEEEEeCCCc-CHHHHHHhcCCCCCHHHHHHHHHHHHHHH
Confidence 55444422 11122222222 3446899999987 66554322222234444444333433 7
Q ss_pred HHHHhcCccccCCCCCCeEEccCCCCceEEEeccccccc
Q 002039 280 HQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKL 318 (977)
Q Consensus 280 ~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l 318 (977)
..+|..|++|+|+||.|||++.+ +.++|+|||++...
T Consensus 117 ~~LH~~~ivH~dlkp~Nil~~~~--~~~kl~DfG~~~~~ 153 (288)
T cd07871 117 SYCHKRKILHRDLKPQNLLINEK--GELKLADFGLARAK 153 (288)
T ss_pred HHHHhCCcccCCCCHHHEEECCC--CCEEECcCcceeec
Confidence 78999999999999999999865 89999999998754
No 86
>cd05115 PTKc_Zap-70 Catalytic domain of the Protein Tyrosine Kinase, Zeta-chain-associated protein of 70kDa. Protein Tyrosine Kinase (PTK) family; Zeta-chain-associated protein of 70kDa (Zap-70); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Zap-70 is a member of the Syk subfamily of kinases, which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Zap-70 binds the phosphorylated ITAM (immunoreceptor tyr activation motif) sequences of the activated TCR zeta-chain through its SH2 domains, leading to its pho
Probab=99.29 E-value=1.5e-11 Score=133.75 Aligned_cols=139 Identities=22% Similarity=0.258 Sum_probs=95.4
Q ss_pred cccccccEEEEEEec---CCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCcHHHH
Q 002039 126 LATASIAQVHRATLV---DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (977)
Q Consensus 126 iasaSigqV~~A~l~---~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea 202 (977)
||.|++|.||+|+++ ++..||||+..+........ +|.+|+
T Consensus 3 ig~G~~g~v~~~~~~~~~~~~~vavk~~~~~~~~~~~~------------------------------------~~~~E~ 46 (257)
T cd05115 3 LGSGNFGCVKKGVYKMRKKQIDVAIKVLKNENEKSVRD------------------------------------EMMREA 46 (257)
T ss_pred cCCCCcccEEEEEEecCCCceeEEEEEcccccChHHHH------------------------------------HHHHHH
Confidence 899999999999864 45679999876543211110 234455
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeeecCCceEEeeccCCCCCCChHHHHhcCCCHHHHHHHHHHHH--HH
Q 002039 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQSSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--AH 280 (977)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~--l~ 280 (977)
..+.++.+ ..-+.+..+......++||||++|.+|.+........++...+...+.++. +.
T Consensus 47 ~~l~~l~h-----------------~~ii~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~ 109 (257)
T cd05115 47 EIMHQLDN-----------------PYIVRMIGVCEAEALMLVMEMASGGPLNKFLSGKKDEITVSNVVELMHQVSMGMK 109 (257)
T ss_pred HHHHhcCC-----------------CCeEEEEEEEcCCCeEEEEEeCCCCCHHHHHHhCCCCCCHHHHHHHHHHHHHHHH
Confidence 55544422 112233333334567899999999999876543333456666666555544 67
Q ss_pred HHHhcCccccCCCCCCeEEccCCCCceEEEecccccccC
Q 002039 281 QIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 319 (977)
Q Consensus 281 ~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~ 319 (977)
.+|..|++|+|+||.||+++.+ +.++|+|||++..+.
T Consensus 110 ~lH~~~i~H~dlkp~nil~~~~--~~~kl~dfg~~~~~~ 146 (257)
T cd05115 110 YLEGKNFVHRDLAARNVLLVNQ--HYAKISDFGLSKALG 146 (257)
T ss_pred HHHhcCeeecccchheEEEcCC--CcEEeccCCcccccc
Confidence 8899999999999999999865 889999999987654
No 87
>cd05604 STKc_SGK3 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 3. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGK3 is expressed in most tissues and is most abundant in the embryo and adult heart and spleen. It was originally discovered in a screen for antiapoptotic genes. It phosphorylates and inhibits the proapoptotic proteins, Bad and FKHRL1. SGK3 also regulates many transporters, ion channels,
Probab=99.29 E-value=1.8e-11 Score=137.99 Aligned_cols=76 Identities=18% Similarity=0.218 Sum_probs=57.5
Q ss_pred cCCceEEeeccCCCCCCChHHHHhcCCCHHHHHHHHHHHH--HHHHHhcCccccCCCCCCeEEccCCCCceEEEeccccc
Q 002039 239 SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTK 316 (977)
Q Consensus 239 ~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~ 316 (977)
....+|||||++|.+|.+... ....+....+...+.+++ +..+|..|++|||+||+|||++.+ +.++|+|||++.
T Consensus 68 ~~~~~lv~e~~~~~~L~~~l~-~~~~~~~~~~~~~~~qi~~al~~lH~~givH~Dlkp~NIll~~~--~~~kL~DfG~~~ 144 (325)
T cd05604 68 TEKLYFVLDFVNGGELFFHLQ-RERSFPEPRARFYAAEIASALGYLHSINIVYRDLKPENILLDSQ--GHVVLTDFGLCK 144 (325)
T ss_pred CCEEEEEEcCCCCCCHHHHHH-HcCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCHHHeEECCC--CCEEEeecCCcc
Confidence 456789999999998865532 222344444444444433 788999999999999999999865 899999999986
Q ss_pred c
Q 002039 317 K 317 (977)
Q Consensus 317 ~ 317 (977)
.
T Consensus 145 ~ 145 (325)
T cd05604 145 E 145 (325)
T ss_pred c
Confidence 5
No 88
>cd05573 STKc_ROCK_NDR_like Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the
Probab=99.29 E-value=7.4e-12 Score=142.43 Aligned_cols=140 Identities=19% Similarity=0.198 Sum_probs=93.1
Q ss_pred cccccccccEEEEEEec-CCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCcHHHH
Q 002039 124 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (977)
Q Consensus 124 ~piasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea 202 (977)
+.||.|++|+||+|+.. +|+.||||+.+....... .+ .-.+..|.
T Consensus 7 ~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~-~~---------------------------------~~~~~~e~ 52 (350)
T cd05573 7 KVIGRGAFGEVWLVRDKDTGQVYAMKVLRKSDMIKR-NQ---------------------------------IAHVRAER 52 (350)
T ss_pred EEEEeCCcEEEEEEEECCCCCEEEEEEEEHHHHhhc-cH---------------------------------HHHHHHHH
Confidence 56999999999999975 799999998764211000 00 00123333
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceee---e-cCCceEEeeccCCCCCCChHHHHhcCCCHHHHHHHHHHHH
Q 002039 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVI---Q-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY 278 (977)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~---~-~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~ 278 (977)
..+..+.+ -.|++++ . ....++||||++|.+|.++.... ..++...+...+.+++
T Consensus 53 ~~l~~~~~--------------------~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~-~~l~~~~~~~i~~qi~ 111 (350)
T cd05573 53 DILADADS--------------------PWIVKLYYSFQDEEHLYLVMEYMPGGDLMNLLIRK-DVFPEETARFYIAELV 111 (350)
T ss_pred HHHHhcCC--------------------CCccchhhheecCCeEEEEEcCCCCCCHHHHHHHc-CCCCHHHHHHHHHHHH
Confidence 33333221 1122222 2 35568999999999988764322 3455555444444443
Q ss_pred --HHHHHhcCccccCCCCCCeEEccCCCCceEEEecccccccCH
Q 002039 279 --AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 320 (977)
Q Consensus 279 --l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 320 (977)
+..+|..|++|+|+||.|||++.+ +.++|+|||++..+..
T Consensus 112 ~aL~~LH~~giiH~Dlkp~NIll~~~--~~~kL~Dfg~~~~~~~ 153 (350)
T cd05573 112 LALDSVHKLGFIHRDIKPDNILIDAD--GHIKLADFGLCKKMNK 153 (350)
T ss_pred HHHHHHHHCCeeccCCCHHHeEECCC--CCEEeecCCCCccCcc
Confidence 889999999999999999999865 8999999999887654
No 89
>cd05599 STKc_NDR_like Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplica
Probab=99.29 E-value=9.3e-12 Score=142.61 Aligned_cols=140 Identities=16% Similarity=0.183 Sum_probs=93.1
Q ss_pred cccccccccEEEEEEec-CCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCcHHHH
Q 002039 124 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (977)
Q Consensus 124 ~piasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea 202 (977)
+.||.|++|.||+|+.+ +|+.||||+.+..-. ...+ .. ..+.+|.
T Consensus 7 ~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~--~~~~--------------------------~~------~~~~~E~ 52 (364)
T cd05599 7 KVIGRGAFGEVRLVQKKDTGHIYAMKKLRKSEM--LEKE--------------------------QV------AHVRAER 52 (364)
T ss_pred EEEEecCCEEEEEEEECCCCCEEEEEEEEHHHh--hhhh--------------------------HH------HHHHHHH
Confidence 57999999999999974 799999998753100 0000 00 0122343
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceee---e-cCCceEEeeccCCCCCCChHHHHhcCCCHHHHHHHHHHHH
Q 002039 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVI---Q-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY 278 (977)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~---~-~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~ 278 (977)
..+..+.+ ..|+.++ . ....+|||||++|.+|.++.. ....+....+...+.+++
T Consensus 53 ~il~~l~h--------------------~~iv~~~~~~~~~~~~~lv~E~~~~g~L~~~l~-~~~~l~~~~~~~~~~qi~ 111 (364)
T cd05599 53 DILAEADN--------------------PWVVKLYYSFQDENYLYLIMEYLPGGDMMTLLM-KKDTFTEEETRFYIAETI 111 (364)
T ss_pred HHHHhCCC--------------------CCCcceEEEEEcCCeEEEEECCCCCcHHHHHHH-HcCCCCHHHHHHHHHHHH
Confidence 33333321 1222332 2 455789999999999877643 222345554444444444
Q ss_pred --HHHHHhcCccccCCCCCCeEEccCCCCceEEEecccccccCH
Q 002039 279 --AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 320 (977)
Q Consensus 279 --l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 320 (977)
+..+|..|++|||+||+|||++.+ +.++|+|||++..+..
T Consensus 112 ~aL~~lH~~~ivH~Dlkp~NIl~~~~--~~~kl~Dfg~~~~~~~ 153 (364)
T cd05599 112 LAIDSIHKLGYIHRDIKPDNLLLDAK--GHIKLSDFGLCTGLKK 153 (364)
T ss_pred HHHHHHHHCCeEeccCCHHHeEECCC--CCEEEeecccceeccc
Confidence 788999999999999999999865 8999999999877643
No 90
>KOG0660 consensus Mitogen-activated protein kinase [Signal transduction mechanisms]
Probab=99.29 E-value=2.7e-12 Score=138.75 Aligned_cols=145 Identities=18% Similarity=0.228 Sum_probs=85.1
Q ss_pred ccccccccccEEEEEEe-cCCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCcHHH
Q 002039 123 ETPLATASIAQVHRATL-VDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSE 201 (977)
Q Consensus 123 ~~piasaSigqV~~A~l-~~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~E 201 (977)
.+|||.|++|.|..|+. ++|+.||||-.. +.+..-+. .++. .+|
T Consensus 27 ~~~iG~GAyGvVcsA~~~~t~~~VAIKKi~----~~F~~~~~-------------------------akRt------lRE 71 (359)
T KOG0660|consen 27 IEPIGRGAYGVVCSAKDKRTGEKVAIKKIL----NPFENQID-------------------------AKRT------LRE 71 (359)
T ss_pred cccccCcceeeEEEEEEcCCCCEeehhhhh----hhhhchHH-------------------------HHHH------HHH
Confidence 48999999999999997 589999999322 11111110 0011 123
Q ss_pred HHHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeee-cCCceEEeeccCCCCCCChHHHHhcC-CCHHHHHHHHHHHH-
Q 002039 202 AENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAFG-VNKQKVVEEITRAY- 278 (977)
Q Consensus 202 a~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLVmE~i~G~~L~~~~~~~~~~-~~~~~l~~~l~~~~- 278 (977)
.+-++++++. ++. ...++..|.... -.+-++|+|+++ ..|..+. +... +....+-.-+.+++
T Consensus 72 lklLr~~~He-----NIi-------~l~di~~p~~~~~f~DvYiV~elMe-tDL~~ii--k~~~~L~d~H~q~f~YQiLr 136 (359)
T KOG0660|consen 72 LKLLRHLRHE-----NII-------GLLDIFRPPSRDKFNDVYLVFELME-TDLHQII--KSQQDLTDDHAQYFLYQILR 136 (359)
T ss_pred HHHHHHhcCC-----Ccc-------eEEeecccccccccceeEEehhHHh-hHHHHHH--HcCccccHHHHHHHHHHHHH
Confidence 3444444320 000 011233332111 355689999995 3333332 2211 22222222222222
Q ss_pred -HHHHHhcCccccCCCCCCeEEccCCCCceEEEecccccccC
Q 002039 279 -AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 319 (977)
Q Consensus 279 -l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~ 319 (977)
++.||..|++|||+||+|++++.+ ..++++|||+++.++
T Consensus 137 gLKyiHSAnViHRDLKPsNll~n~~--c~lKI~DFGLAR~~~ 176 (359)
T KOG0660|consen 137 GLKYIHSANVIHRDLKPSNLLLNAD--CDLKICDFGLARYLD 176 (359)
T ss_pred hcchhhcccccccccchhheeeccC--CCEEeccccceeecc
Confidence 566778999999999999999966 789999999999995
No 91
>cd05592 STKc_nPKC_theta_delta Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an imp
Probab=99.28 E-value=1.1e-11 Score=139.21 Aligned_cols=77 Identities=17% Similarity=0.208 Sum_probs=58.6
Q ss_pred cCCceEEeeccCCCCCCChHHHHhcCCCHHHHHHHHHHHH--HHHHHhcCccccCCCCCCeEEccCCCCceEEEeccccc
Q 002039 239 SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTK 316 (977)
Q Consensus 239 ~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~ 316 (977)
....++||||++|.+|.+... ....++...+...+.+++ +..+|..|++|||+||.||+++.+ +.++|+|||++.
T Consensus 68 ~~~~~lv~e~~~gg~L~~~~~-~~~~~~~~~~~~~~~qi~~al~~LH~~~ivH~dlkp~Nill~~~--~~~kL~Dfg~a~ 144 (316)
T cd05592 68 KEHLFFVMEYLNGGDLMFHIQ-SSGRFDEARARFYAAEIICGLQFLHKKGIIYRDLKLDNVLLDKD--GHIKIADFGMCK 144 (316)
T ss_pred CCEEEEEEcCCCCCcHHHHHH-HcCCCCHHHHHHHHHHHHHHHHHHHHCCEEeCCCCHHHeEECCC--CCEEEccCcCCe
Confidence 345689999999999876533 222345555544444443 788999999999999999999865 899999999987
Q ss_pred cc
Q 002039 317 KL 318 (977)
Q Consensus 317 ~l 318 (977)
..
T Consensus 145 ~~ 146 (316)
T cd05592 145 EN 146 (316)
T ss_pred EC
Confidence 54
No 92
>COG1718 RIO1 Serine/threonine protein kinase involved in cell cycle control [Signal transduction mechanisms / Cell division and chromosome partitioning]
Probab=99.28 E-value=4e-11 Score=125.12 Aligned_cols=185 Identities=20% Similarity=0.249 Sum_probs=125.7
Q ss_pred ccccccccEEEEEEecCCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhh-CCCCCCchhHHHHhhhcccccCcHHHHH
Q 002039 125 PLATASIAQVHRATLVDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWA-EPQYDFNPIIDEWCKEAPKELDFNSEAE 203 (977)
Q Consensus 125 piasaSigqV~~A~l~~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~-~~~~~~~~~~~e~~~~l~~Eld~~~Ea~ 203 (977)
+|.+|--+.||+|...++..|||||.+......-. ++....--..+ ....+...++..|. +.|.+
T Consensus 55 ~istGKEA~Vy~a~~~~~~~~avKiyr~~t~~fk~-----~~~Yi~gd~Rf~~~~~~rr~lv~~W~---------~kEf~ 120 (268)
T COG1718 55 CISTGKEANVYLAETGDGRYVAVKIYRTSTSEFKR-----IRRYIQGDPRFRNSRSNRRKLVFAWA---------RKEFR 120 (268)
T ss_pred eecCCcceEEEeeccCCCceEEEEEEehhhhhhhh-----HHHHHhcChhhhcCCCCHHHHHHHHH---------HHHHH
Confidence 78999999999999888999999999876543221 11111000000 11123334444444 57889
Q ss_pred HHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeeecCCceEEeeccCCCCCCChHHHHhcCC---CHHHHHHHHHHHHHH
Q 002039 204 NTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQSSETVLILEFMDGIRLNDCESLEAFGV---NKQKVVEEITRAYAH 280 (977)
Q Consensus 204 n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~~~~~vLVmE~i~G~~L~~~~~~~~~~~---~~~~l~~~l~~~~l~ 280 (977)
|+.++.+ .+|.||+++..-++||||||+... -...-.+...+. +...+.+.+++-.-.
T Consensus 121 NL~R~~e------------------AGVrvP~Pi~~~~nVLvMEfIg~~-g~pAP~LkDv~~e~~e~~~~~~~~v~~~~~ 181 (268)
T COG1718 121 NLKRAYE------------------AGVRVPEPIAFRNNVLVMEFIGDD-GLPAPRLKDVPLELEEAEGLYEDVVEYMRR 181 (268)
T ss_pred HHHHHHH------------------cCCCCCCceeecCCeEEEEeccCC-CCCCCCcccCCcCchhHHHHHHHHHHHHHH
Confidence 9999876 269999999999999999999543 111111222221 234455555555555
Q ss_pred HHHhcCccccCCCCCCeEEccCCCCceEEEecccccccCHHHHHHHHHHHHHHHcCCHHHHHHHHHHcCccc
Q 002039 281 QIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSSSMKQALAKMFFAAAEGDHVALLSAFAEMGLRL 352 (977)
Q Consensus 281 ~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~~~r~~~~~l~~a~~~~d~~~~~~~~~~~g~~~ 352 (977)
++...|++|+|+..-|||+. + +.+++||||.+....... ...++.+|...+...|...|+..
T Consensus 182 l~~~a~LVHgDLSEyNiL~~-~--~~p~iID~~QaV~~~hp~-------a~e~L~RDv~Ni~~fF~r~gv~~ 243 (268)
T COG1718 182 LYKEAGLVHGDLSEYNILVH-D--GEPYIIDVSQAVTIDHPN-------AFEFLERDVRNIARFFRRKGVEA 243 (268)
T ss_pred HHHhcCcccccchhhheEEE-C--CeEEEEECccccccCCCc-------hHHHHHHHHHHHHHHHHHcCCCC
Confidence 55569999999999999997 3 789999999998887533 23346789999999999999853
No 93
>cd07878 STKc_p38beta_MAPK11 Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38beta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38beta, also called MAPK11, is
Probab=99.28 E-value=1.3e-11 Score=140.14 Aligned_cols=157 Identities=20% Similarity=0.254 Sum_probs=96.2
Q ss_pred HHHhCCChhhcccccC-ccccccccccEEEEEEe-cCCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchh
Q 002039 107 EREFGESMGGMFMDFV-ETPLATASIAQVHRATL-VDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPI 184 (977)
Q Consensus 107 ~~elg~~~~~~f~~~d-~~piasaSigqV~~A~l-~~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~ 184 (977)
++|+++...++...+. .++||+|++|+||+|+. .+++.||||+.......... .+
T Consensus 3 ~~~~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~-----~~------------------ 59 (343)
T cd07878 3 RQELNKTVWEVPERYQNLTPVGSGAYGSVCSAYDTRLRQKVAVKKLSRPFQSLIH-----AR------------------ 59 (343)
T ss_pred HHHHhHHHhhhhhhhhhheecccCCCeEEEEEEECCCCCEEEEEEeCchhhhhHH-----HH------------------
Confidence 4455544444444444 37899999999999997 47899999987643211100 00
Q ss_pred HHHHhhhcccccCcHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceee-------ecCCceEEeeccCCCCCCCh
Q 002039 185 IDEWCKEAPKELDFNSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVI-------QSSETVLILEFMDGIRLNDC 257 (977)
Q Consensus 185 ~~e~~~~l~~Eld~~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~-------~~~~~vLVmE~i~G~~L~~~ 257 (977)
.+.+|.+.+.++.+. ..+.+..++ .....+++||++ |.+|.++
T Consensus 60 ------------~~~~E~~~l~~l~h~-----------------~iv~~~~~~~~~~~~~~~~~~~~~~~~~-~~~l~~~ 109 (343)
T cd07878 60 ------------RTYRELRLLKHMKHE-----------------NVIGLLDVFTPATSIENFNEVYLVTNLM-GADLNNI 109 (343)
T ss_pred ------------HHHHHHHHHHhcCCC-----------------chhhhhhhhcccccccccCcEEEEeecC-CCCHHHH
Confidence 011233333322110 000011111 023457999988 6666654
Q ss_pred HHHHhcCCCHHHHHHHHHHHH--HHHHHhcCccccCCCCCCeEEccCCCCceEEEecccccccCH
Q 002039 258 ESLEAFGVNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 320 (977)
Q Consensus 258 ~~~~~~~~~~~~l~~~l~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 320 (977)
. ....++...+...+.+++ +..+|..|++|+|+||+||+++.+ +.++|+|||++..++.
T Consensus 110 ~--~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrdikp~Nil~~~~--~~~kl~Dfg~~~~~~~ 170 (343)
T cd07878 110 V--KCQKLSDEHVQFLIYQLLRGLKYIHSAGIIHRDLKPSNVAVNED--CELRILDFGLARQADD 170 (343)
T ss_pred H--hcCCCCHHHHHHHHHHHHHHHHHHHHCCeecccCChhhEEECCC--CCEEEcCCccceecCC
Confidence 2 233455555555544444 778999999999999999999865 8999999999887654
No 94
>cd05629 STKc_NDR_like_fungal Catalytic domain of Fungal Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), NDR kinase subfamily, fungal NDR-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group is composed of fungal NDR-like proteins including Saccharomyces cerevisiae CBK1 (or CBK1p), Schizosaccharomyces pombe Orb6 (or Orb6p), Ustilago maydis Ukc1 (or Ukc1p), and Neurospora crassa Cot1. Like NDR kinase, group members contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. CBK1 is an essential component in the RAM (regulation of
Probab=99.28 E-value=1.5e-11 Score=141.78 Aligned_cols=140 Identities=16% Similarity=0.202 Sum_probs=92.1
Q ss_pred cccccccccEEEEEEe-cCCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCcHHHH
Q 002039 124 TPLATASIAQVHRATL-VDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (977)
Q Consensus 124 ~piasaSigqV~~A~l-~~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea 202 (977)
+.||+|++|.||+|+. .+|+.||||+....- ....+ . ++ .+.+|.
T Consensus 7 ~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~--~~~~~--~--------------------~~----------~~~~E~ 52 (377)
T cd05629 7 KVIGKGAFGEVRLVQKKDTGKIYAMKTLLKSE--MFKKD--Q--------------------LA----------HVKAER 52 (377)
T ss_pred EEEeecCCEEEEEEEECCCCCEEEEEEEEHHH--HHHhH--H--------------------HH----------HHHHHH
Confidence 5799999999999987 489999999864310 00000 0 00 123344
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeee----cCCceEEeeccCCCCCCChHHHHhcCCCHHHHHHHHHHHH
Q 002039 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ----SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY 278 (977)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~----~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~ 278 (977)
+.+.++.+ -.|++++. ....+|||||++|.+|.+... ....+....+...+.+++
T Consensus 53 ~il~~l~h--------------------p~iv~~~~~~~~~~~~~lv~E~~~gg~L~~~l~-~~~~~~~~~~~~~~~ql~ 111 (377)
T cd05629 53 DVLAESDS--------------------PWVVSLYYSFQDAQYLYLIMEFLPGGDLMTMLI-KYDTFSEDVTRFYMAECV 111 (377)
T ss_pred HHHHhCCC--------------------CCcceEEEEEEcCCeeEEEEeCCCCCcHHHHHH-hcCCCCHHHHHHHHHHHH
Confidence 44333221 12333332 456789999999999977643 222344444433333433
Q ss_pred --HHHHHhcCccccCCCCCCeEEccCCCCceEEEecccccccCH
Q 002039 279 --AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 320 (977)
Q Consensus 279 --l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 320 (977)
+..+|..|++|||+||.|||++.+ +.++|+|||+++.+..
T Consensus 112 ~aL~~LH~~givHrDlkp~NIll~~~--~~~kl~DfGla~~~~~ 153 (377)
T cd05629 112 LAIEAVHKLGFIHRDIKPDNILIDRG--GHIKLSDFGLSTGFHK 153 (377)
T ss_pred HHHHHHHhCCeeccCCCHHHEEECCC--CCEEEeeccccccccc
Confidence 788999999999999999999865 8999999999976643
No 95
>cd05602 STKc_SGK1 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 1. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK1 is ubiquitously expressed and is under transcriptional control of numerous stimuli including cell stress (cell shrinkage), serum, hormones (gluco- and mineralocorticoids), gonadotropins, growth factors, interleukin-6, and other cytokines. It plays roles in sodium retention and potassium elimination in the kidney, nutrient transport, salt
Probab=99.28 E-value=2e-11 Score=137.62 Aligned_cols=77 Identities=17% Similarity=0.169 Sum_probs=57.0
Q ss_pred cCCceEEeeccCCCCCCChHHHHhcCCCHHHHHHHHHHHH--HHHHHhcCccccCCCCCCeEEccCCCCceEEEeccccc
Q 002039 239 SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTK 316 (977)
Q Consensus 239 ~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~ 316 (977)
....++||||++|.+|.+.... ...+....+...+.+++ +..+|..|++|||+||+|||++.+ +.++|+|||++.
T Consensus 68 ~~~~~lv~e~~~~~~L~~~~~~-~~~~~~~~~~~~~~qi~~~L~~lH~~giiHrDlkp~Nili~~~--~~~kl~DfG~a~ 144 (325)
T cd05602 68 ADKLYFVLDYINGGELFYHLQR-ERCFLEPRARFYAAEIASALGYLHSLNIVYRDLKPENILLDSQ--GHIVLTDFGLCK 144 (325)
T ss_pred CCeEEEEEeCCCCCcHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHeEECCC--CCEEEccCCCCc
Confidence 4556899999999988765432 22333333333333333 778999999999999999999865 899999999987
Q ss_pred cc
Q 002039 317 KL 318 (977)
Q Consensus 317 ~l 318 (977)
..
T Consensus 145 ~~ 146 (325)
T cd05602 145 EN 146 (325)
T ss_pred cc
Confidence 54
No 96
>cd05622 STKc_ROCK1 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 1. Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK1 (or ROK-beta) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK1 is preferentially expressed in the liver, lung, spleen, testes, an
Probab=99.28 E-value=1.5e-11 Score=141.50 Aligned_cols=142 Identities=18% Similarity=0.170 Sum_probs=92.0
Q ss_pred cccccccccEEEEEEec-CCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCcHHHH
Q 002039 124 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (977)
Q Consensus 124 ~piasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea 202 (977)
+.||.|++|.||+|+.+ +++.||+|+....-.. -..+. -.+.+|.
T Consensus 49 ~~lG~G~fg~Vy~~~~~~~~~~~aiK~i~~~~~~-~~~~~---------------------------------~~~~~e~ 94 (371)
T cd05622 49 KVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMI-KRSDS---------------------------------AFFWEER 94 (371)
T ss_pred EEEeecCCeEEEEEEECCCCcEEEEEEEEHHHhh-hhHHH---------------------------------HHHHHHH
Confidence 67999999999999985 7899999987431000 00000 0122333
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeee-cCCceEEeeccCCCCCCChHHHHhcCCCHHHHHHHHHHHH--H
Q 002039 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--A 279 (977)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~--l 279 (977)
..+..+.+ ...+.+-..+. ....++||||++|.+|.++. ....++...+...+.+++ +
T Consensus 95 ~i~~~~~h-----------------p~iv~~~~~~~~~~~~~lv~Ey~~gg~L~~~~--~~~~~~~~~~~~~~~qi~~aL 155 (371)
T cd05622 95 DIMAFANS-----------------PWVVQLFYAFQDDRYLYMVMEYMPGGDLVNLM--SNYDVPEKWARFYTAEVVLAL 155 (371)
T ss_pred HHHHhCCC-----------------CCCCeEEEEEEcCCEEEEEEcCCCCCcHHHHH--HhcCCCHHHHHHHHHHHHHHH
Confidence 33332211 01112222222 35568999999999998764 333455444444344433 7
Q ss_pred HHHHhcCccccCCCCCCeEEccCCCCceEEEecccccccCH
Q 002039 280 HQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 320 (977)
Q Consensus 280 ~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 320 (977)
..+|..|++||||||.|||++.+ +.++|+|||++..+..
T Consensus 156 ~~LH~~~ivHrDLkp~NIll~~~--~~ikL~DfG~a~~~~~ 194 (371)
T cd05622 156 DAIHSMGFIHRDVKPDNMLLDKS--GHLKLADFGTCMKMNK 194 (371)
T ss_pred HHHHHCCEEeCCCCHHHEEECCC--CCEEEEeCCceeEcCc
Confidence 88999999999999999999865 8999999999887653
No 97
>cd05596 STKc_ROCK Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase. Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK is also referred to as Rho-associated kinase or simply as Rho kinase. It contains an N-terminal extension, a catalytic kinase domain, and a long C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain. It is activated via in
Probab=99.28 E-value=1e-11 Score=142.89 Aligned_cols=141 Identities=17% Similarity=0.170 Sum_probs=92.1
Q ss_pred cccccccccEEEEEEec-CCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCcHHHH
Q 002039 124 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (977)
Q Consensus 124 ~piasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea 202 (977)
+.||.|++|.||+|+.+ +|+.||||+........ .. ..-.+..|.
T Consensus 49 ~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~-~~---------------------------------~~~~~~~e~ 94 (370)
T cd05596 49 KVIGRGAFGEVQLVRHKSSKQVYAMKLLSKFEMIK-RS---------------------------------DSAFFWEER 94 (370)
T ss_pred EEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhh-hh---------------------------------hHHHHHHHH
Confidence 67999999999999974 78999999875310000 00 000122343
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeee-cCCceEEeeccCCCCCCChHHHHhcCCCHHHHHHHHHHHH--H
Q 002039 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--A 279 (977)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~--l 279 (977)
..+..+.+ ...+.+...+. ....+|||||++|++|.++. ....+....+...+.+++ +
T Consensus 95 ~il~~~~h-----------------~~iv~~~~~~~~~~~~~lv~Ey~~gg~L~~~l--~~~~l~~~~~~~~~~qi~~aL 155 (370)
T cd05596 95 DIMAHANS-----------------EWIVQLHYAFQDDKYLYMVMEYMPGGDLVNLM--SNYDIPEKWARFYTAEVVLAL 155 (370)
T ss_pred HHHHhCCC-----------------CCcceEEEEEecCCEEEEEEcCCCCCcHHHHH--HhcCCCHHHHHHHHHHHHHHH
Confidence 33333211 01122222222 34568999999999998763 333445444444444433 7
Q ss_pred HHHHhcCccccCCCCCCeEEccCCCCceEEEecccccccC
Q 002039 280 HQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 319 (977)
Q Consensus 280 ~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~ 319 (977)
..+|..|++|||+||.|||++.+ +.++|+|||++..+.
T Consensus 156 ~~LH~~~ivHrDLkp~NILl~~~--~~~kL~DfG~~~~~~ 193 (370)
T cd05596 156 DAIHSMGFIHRDVKPDNMLLDKS--GHLKLADFGTCMKMD 193 (370)
T ss_pred HHHHHCCeeccCCCHHHEEEcCC--CCEEEEeccceeecc
Confidence 88999999999999999999865 899999999987664
No 98
>cd05616 STKc_cPKC_beta Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C beta. Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, beta isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and
Probab=99.28 E-value=1.3e-11 Score=139.00 Aligned_cols=139 Identities=14% Similarity=0.130 Sum_probs=90.4
Q ss_pred cccccccccEEEEEEec-CCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCcHHHH
Q 002039 124 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (977)
Q Consensus 124 ~piasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea 202 (977)
+.||+|++|.||+|+.+ +++.||||+.+...... ..+. ..+..|.
T Consensus 6 ~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~-~~~~---------------------------------~~~~~e~ 51 (323)
T cd05616 6 MVLGKGSFGKVMLAERKGTDELYAIKILKKDVVIQ-DDDV---------------------------------ECTMVEK 51 (323)
T ss_pred EEEeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhh-hhHH---------------------------------HHHHHHH
Confidence 56999999999999975 68899999876532100 0000 0112222
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceee---e-cCCceEEeeccCCCCCCChHHHHhcCCCHHHHHHHHHHHH
Q 002039 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVI---Q-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY 278 (977)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~---~-~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~ 278 (977)
+.+....+ + -.|+.++ . ....+|||||++|.+|.+... ....++...+...+.+++
T Consensus 52 ~~l~~~~~-----------------~--~~i~~~~~~~~~~~~~~lv~E~~~~g~L~~~~~-~~~~~~~~~~~~~~~qi~ 111 (323)
T cd05616 52 RVLALSGK-----------------P--PFLTQLHSCFQTMDRLYFVMEYVNGGDLMYQIQ-QVGRFKEPHAVFYAAEIA 111 (323)
T ss_pred HHHHhccC-----------------C--CeEeeEEEEEecCCEEEEEEcCCCCCCHHHHHH-HcCCCCHHHHHHHHHHHH
Confidence 22222110 1 1233332 2 344689999999998876532 222345555555555544
Q ss_pred --HHHHHhcCccccCCCCCCeEEccCCCCceEEEeccccccc
Q 002039 279 --AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKL 318 (977)
Q Consensus 279 --l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l 318 (977)
+..+|..|++|+|+||+|||++.+ +.++|+|||++...
T Consensus 112 ~aL~~LH~~~ivHrDlkp~Nill~~~--~~~kL~DfG~~~~~ 151 (323)
T cd05616 112 IGLFFLHSKGIIYRDLKLDNVMLDSE--GHIKIADFGMCKEN 151 (323)
T ss_pred HHHHHHHHCCEEecCCCHHHeEECCC--CcEEEccCCCceec
Confidence 778999999999999999999865 89999999998754
No 99
>cd05575 STKc_SGK Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell pr
Probab=99.28 E-value=2.3e-11 Score=137.12 Aligned_cols=77 Identities=17% Similarity=0.179 Sum_probs=57.7
Q ss_pred cCCceEEeeccCCCCCCChHHHHhcCCCHHHHHHHHHHHH--HHHHHhcCccccCCCCCCeEEccCCCCceEEEeccccc
Q 002039 239 SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTK 316 (977)
Q Consensus 239 ~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~ 316 (977)
....++||||++|.+|.+.... ...+....+...+.+++ +..+|..|++|||+||.|||++.+ +.++|+|||++.
T Consensus 68 ~~~~~lv~e~~~~g~L~~~l~~-~~~~~~~~~~~~~~qi~~~l~~lH~~givH~dikp~NIll~~~--~~~kl~Dfg~~~ 144 (323)
T cd05575 68 ADKLYFVLDYVNGGELFFHLQR-ERSFPEPRARFYAAEIASALGYLHSLNIIYRDLKPENILLDSQ--GHVVLTDFGLCK 144 (323)
T ss_pred CCEEEEEEcCCCCCCHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHCCeEeCCCCHHHeEECCC--CcEEEeccCCCc
Confidence 4556899999999998765332 22344444444444433 788999999999999999999865 899999999986
Q ss_pred cc
Q 002039 317 KL 318 (977)
Q Consensus 317 ~l 318 (977)
..
T Consensus 145 ~~ 146 (323)
T cd05575 145 EG 146 (323)
T ss_pred cc
Confidence 53
No 100
>KOG0591 consensus NIMA (never in mitosis)-related G2-specific serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=99.27 E-value=2.1e-12 Score=134.37 Aligned_cols=143 Identities=20% Similarity=0.199 Sum_probs=90.3
Q ss_pred cccccccccEEEEEEe-cCCCEEEEEE-ecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCcHHH
Q 002039 124 TPLATASIAQVHRATL-VDGRQVVVKV-QHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSE 201 (977)
Q Consensus 124 ~piasaSigqV~~A~l-~~G~~VAVKv-~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~E 201 (977)
+.||.||||.||+++. .+|..||.|- +.-.+...-..| +..|++..+.
T Consensus 25 ~~IG~GsFg~vykv~~~~~g~l~a~K~i~f~~md~k~rq~------------------------------~v~Ei~lLkQ 74 (375)
T KOG0591|consen 25 KKIGRGSFGEVYKVQCLLDGKLVALKKIQFGMMDAKARQD------------------------------CVKEISLLKQ 74 (375)
T ss_pred HHHcCCcchheEEeeeccCcchhhhhhcchhhccHHHHHH------------------------------HHHHHHHHHh
Confidence 5699999999999985 6999999983 332222222222 2223333333
Q ss_pred HH--HHHHHHH-HhCCCCCCCCCCCCCCCCCCeEeceeeecCC-ceEEeeccCCCCCCChHHHH---hcCCCHHHHHHHH
Q 002039 202 AE--NTRIVSA-NLGCKNKHEDSNKKPAYEVDVLIPEVIQSSE-TVLILEFMDGIRLNDCESLE---AFGVNKQKVVEEI 274 (977)
Q Consensus 202 a~--n~~~~~~-~~~~~~~~~~~~~~~~~~~~v~vP~v~~~~~-~vLVmE~i~G~~L~~~~~~~---~~~~~~~~l~~~l 274 (977)
.+ |+.++.+ .|.. ..+ -.||||+++++.|+....-- ..-+..+.+-..+
T Consensus 75 L~HpNIVqYy~~~f~~------------------------~~evlnivmE~c~~GDLsqmIk~~K~qkr~ipE~~Vwk~f 130 (375)
T KOG0591|consen 75 LNHPNIVQYYAHSFIE------------------------DNEVLNIVMELCDAGDLSQMIKHFKKQKRLIPEKTVWKYF 130 (375)
T ss_pred cCCchHHHHHHHhhhc------------------------cchhhHHHHHhhcccCHHHHHHHHHhccccCchHHHHHHH
Confidence 22 3333332 2210 112 35899999999998875421 1223344455555
Q ss_pred HHHH--HHHHHh--cC--ccccCCCCCCeEEccCCCCceEEEecccccccCHHH
Q 002039 275 TRAY--AHQIYV--DG--FFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSSSM 322 (977)
Q Consensus 275 ~~~~--l~~i~~--~G--~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~~~ 322 (977)
++++ +...|. .. ++||||||+||+++.. |.++|-|||+.+.++.+.
T Consensus 131 ~QL~~AL~~cH~~~~r~~VmHRDIKPaNIFl~~~--gvvKLGDfGL~r~l~s~~ 182 (375)
T KOG0591|consen 131 VQLCRALYHCHSKIPRGTVMHRDIKPANIFLTAN--GVVKLGDFGLGRFLSSKT 182 (375)
T ss_pred HHHHHHHHHHhccccccceeeccCcchheEEcCC--CceeeccchhHhHhcchh
Confidence 5544 444444 33 9999999999999955 899999999999887654
No 101
>cd05608 STKc_GRK1 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual g
Probab=99.27 E-value=1.4e-11 Score=135.87 Aligned_cols=142 Identities=16% Similarity=0.156 Sum_probs=91.6
Q ss_pred cccccccEEEEEEec-CCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCcHHHHHH
Q 002039 126 LATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEAEN 204 (977)
Q Consensus 126 iasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea~n 204 (977)
||.|++|.||++..+ +|+.||||+......... .+ + -.+..|.+.
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~-~~-----------------------~----------~~~~~E~~i 46 (280)
T cd05608 1 LGKGGFGEVSACQMRATGKLYACKKLNKKRLKKR-KG-----------------------Y----------EGAMVEKRI 46 (280)
T ss_pred CCCCCceeEEEEEEccCCcEEEEEeeeHHHHhhh-HH-----------------------H----------HHHHHHHHH
Confidence 689999999999974 799999998643211000 00 0 013345444
Q ss_pred HHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeee-cCCceEEeeccCCCCCCChHHH---HhcCCCHHHHHHHHHHHH--
Q 002039 205 TRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESL---EAFGVNKQKVVEEITRAY-- 278 (977)
Q Consensus 205 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLVmE~i~G~~L~~~~~~---~~~~~~~~~l~~~l~~~~-- 278 (977)
+..+.+ ...+.+-..+. ....+|||||++|.+|.+.... ....++...+...+.+++
T Consensus 47 l~~l~~-----------------~~i~~~~~~~~~~~~~~lv~e~~~~g~L~~~~~~~~~~~~~l~~~~~~~~~~qi~~~ 109 (280)
T cd05608 47 LAKVHS-----------------RFIVSLAYAFQTKTDLCLVMTIMNGGDLRYHIYNVDEENPGFPEPRACFYTAQIISG 109 (280)
T ss_pred HHhCCC-----------------CcEeeeeEEEcCCCeEEEEEeCCCCCCHHHHHHhccccCCCCCHHHHHHHHHHHHHH
Confidence 444321 11122222222 4556899999999998765321 112344555555444444
Q ss_pred HHHHHhcCccccCCCCCCeEEccCCCCceEEEecccccccCH
Q 002039 279 AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 320 (977)
Q Consensus 279 l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 320 (977)
+..+|..|++|+|+||.||+++.+ +.++|+|||++..+..
T Consensus 110 l~~lH~~~i~H~dlkp~Nili~~~--~~~~l~dfg~~~~~~~ 149 (280)
T cd05608 110 LEHLHQRRIIYRDLKPENVLLDND--GNVRISDLGLAVELKD 149 (280)
T ss_pred HHHHHHCCcccCCCCHHHEEECCC--CCEEEeeCccceecCC
Confidence 788999999999999999999855 8899999999876643
No 102
>KOG1187 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.27 E-value=6.4e-12 Score=142.87 Aligned_cols=142 Identities=22% Similarity=0.231 Sum_probs=98.7
Q ss_pred ccCc-cccccccccEEEEEEecCCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCc
Q 002039 120 DFVE-TPLATASIAQVHRATLVDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDF 198 (977)
Q Consensus 120 ~~d~-~piasaSigqV~~A~l~~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~ 198 (977)
.|+. .-||.|+||.||+|.+.+|+.||||...+..... +.+|
T Consensus 76 ~Fs~~~~ig~Ggfg~VYkG~l~~~~~vAVK~~~~~~~~~-------------------------------------~~eF 118 (361)
T KOG1187|consen 76 NFSESNLIGEGGFGTVYKGVLSDGTVVAVKRLSSNSGQG-------------------------------------EREF 118 (361)
T ss_pred CCchhcceecCCCeEEEEEEECCCCEEEEEEecCCCCcc-------------------------------------hhHH
Confidence 4543 6799999999999999999999999665432210 2236
Q ss_pred HHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeeec---C-CceEEeeccCCCCCCChHHHHhc-CCCHH---HH
Q 002039 199 NSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQS---S-ETVLILEFMDGIRLNDCESLEAF-GVNKQ---KV 270 (977)
Q Consensus 199 ~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~~---~-~~vLVmE~i~G~~L~~~~~~~~~-~~~~~---~l 270 (977)
.+|...+.+++|. -.|.-+-.| . .++||.||++.++|.+....... .++-. +|
T Consensus 119 ~~Ei~~ls~l~H~-------------------Nlv~LlGyC~e~~~~~~LVYEym~nGsL~d~L~~~~~~~L~W~~R~kI 179 (361)
T KOG1187|consen 119 LNEVEILSRLRHP-------------------NLVKLLGYCLEGGEHRLLVYEYMPNGSLEDHLHGKKGEPLDWETRLKI 179 (361)
T ss_pred HHHHHHHhcCCCc-------------------CcccEEEEEecCCceEEEEEEccCCCCHHHHhCCCCCCCCCHHHHHHH
Confidence 7777777776531 112222222 4 48999999999999877432222 23322 34
Q ss_pred HHHHHHHHHHHHHhcC---ccccCCCCCCeEEccCCCCceEEEecccccccCH
Q 002039 271 VEEITRAYAHQIYVDG---FFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 320 (977)
Q Consensus 271 ~~~l~~~~l~~i~~~G---~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 320 (977)
+..+++. +..+|... ++|||+||.|||+|.+ .+.+|.|||+++..+.
T Consensus 180 a~g~A~g-L~yLH~~~~~~iiHrDiKssNILLD~~--~~aKlsDFGLa~~~~~ 229 (361)
T KOG1187|consen 180 ALGAARG-LAYLHEGCPPPIIHRDIKSSNILLDED--FNAKLSDFGLAKLGPE 229 (361)
T ss_pred HHHHHHH-HHHHccCCCCCEecCCCCHHHeeECCC--CCEEccCccCcccCCc
Confidence 4444444 77788744 9999999999999965 9999999999976654
No 103
>cd05603 STKc_SGK2 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 2. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK2 shows a more restricted distribution that SGK1 and is most abundantly expressed in epithelial tissues including kidney, liver, pancreas, and the choroid plexus of the brain. In vitro cellular assays show that SGK2 can stimulate the activity of ion channels, the glutamate transporter EEAT4, and the glutamate receptors, GluR6 and GLUR1.
Probab=99.27 E-value=2.2e-11 Score=136.98 Aligned_cols=76 Identities=17% Similarity=0.197 Sum_probs=56.6
Q ss_pred cCCceEEeeccCCCCCCChHHHHhcCCCHHHHHHHHHHHH--HHHHHhcCccccCCCCCCeEEccCCCCceEEEeccccc
Q 002039 239 SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTK 316 (977)
Q Consensus 239 ~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~ 316 (977)
....++||||++|.+|.+... ....+....+...+.++. +..+|..|++|+|+||.||+++.+ +.++|+|||++.
T Consensus 68 ~~~~~lv~e~~~~~~L~~~l~-~~~~~~~~~~~~~~~qi~~~L~~lH~~~ivH~Dlkp~NIll~~~--~~~kl~Dfg~~~ 144 (321)
T cd05603 68 AEKLYFVLDYVNGGELFFHLQ-RERCFLEPRARFYAAEVASAIGYLHSLNIIYRDLKPENILLDSQ--GHVVLTDFGLCK 144 (321)
T ss_pred CCEEEEEEcCCCCCCHHHHHH-HcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeccCCHHHeEECCC--CCEEEccCCCCc
Confidence 455689999999998865432 122344444444333433 788999999999999999999865 899999999987
Q ss_pred c
Q 002039 317 K 317 (977)
Q Consensus 317 ~ 317 (977)
.
T Consensus 145 ~ 145 (321)
T cd05603 145 E 145 (321)
T ss_pred c
Confidence 5
No 104
>cd05618 STKc_aPKC_iota Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C iota. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, iota isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-iota is directly implicated in carcinogenesis. It is critical to oncogenic signaling mediated by Ras and Bcr-Abl. The PKC-iota gene is the target o
Probab=99.27 E-value=1.9e-11 Score=138.20 Aligned_cols=76 Identities=16% Similarity=0.192 Sum_probs=57.7
Q ss_pred cCCceEEeeccCCCCCCChHHHHhcCCCHHHHHHHHHHHH--HHHHHhcCccccCCCCCCeEEccCCCCceEEEeccccc
Q 002039 239 SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTK 316 (977)
Q Consensus 239 ~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~ 316 (977)
....+|||||++|.+|.+... ....+....+...+.++. +..+|..|++|||+||.||+++.+ +.++|+|||++.
T Consensus 68 ~~~~~lv~E~~~~~~L~~~~~-~~~~l~~~~~~~i~~qi~~~l~~lH~~~ivH~Dikp~Nili~~~--~~~kL~DfG~~~ 144 (329)
T cd05618 68 ESRLFFVIEYVNGGDLMFHMQ-RQRKLPEEHARFYSAEISLALNYLHERGIIYRDLKLDNVLLDSE--GHIKLTDYGMCK 144 (329)
T ss_pred CCEEEEEEeCCCCCCHHHHHH-HcCCCCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCHHHEEECCC--CCEEEeeCCccc
Confidence 456789999999998865532 223345444444444433 788999999999999999999865 899999999986
Q ss_pred c
Q 002039 317 K 317 (977)
Q Consensus 317 ~ 317 (977)
.
T Consensus 145 ~ 145 (329)
T cd05618 145 E 145 (329)
T ss_pred c
Confidence 5
No 105
>COG0478 RIO-like serine/threonine protein kinase fused to N-terminal HTH domain [Signal transduction mechanisms]
Probab=99.26 E-value=4.7e-11 Score=125.61 Aligned_cols=180 Identities=19% Similarity=0.240 Sum_probs=125.8
Q ss_pred cccccccccEEEEEEecCCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCcHHHHH
Q 002039 124 TPLATASIAQVHRATLVDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEAE 203 (977)
Q Consensus 124 ~piasaSigqV~~A~l~~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea~ 203 (977)
++||-|--+-||.|...+|.+||||+-|-|-. .+ +.+.+....+...-...++. ..-+.-.+|.+
T Consensus 97 ~~IGvGKEsdVY~~~~~~g~~~~vKfHR~Grt-sF-------rkvk~~R~y~~~~~h~sWl~-------~sRl~A~rEf~ 161 (304)
T COG0478 97 TKIGVGKESDVYVAIDPKGRKVAVKFHRLGRT-SF-------RKVKRNRDYLADKEHGSWLY-------VSRLAAEREFE 161 (304)
T ss_pred cccccCccceEEEEECCCCCEEEEEEeecCch-hh-------hhhcchhhhhccccCcchhh-------hHHHHHHHHHH
Confidence 68999999999999999999999999987733 22 11211111111111111110 01112234555
Q ss_pred HHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeeecCCceEEeeccCCCCCCChHHHHhcCCCHHHHHHHHHHHHHHHHH
Q 002039 204 NTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQSSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAYAHQIY 283 (977)
Q Consensus 204 n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~l~~i~ 283 (977)
.+.++.. .++.||+++.-+++++|||+++|..|....- ...+...+...+++.+-. +.
T Consensus 162 ~L~~L~~------------------~G~~VP~P~~~nRHaVvMe~ieG~eL~~~r~---~~en~~~il~~il~~~~~-~~ 219 (304)
T COG0478 162 ALQRLYP------------------EGVKVPKPIAWNRHAVVMEYIEGVELYRLRL---DVENPDEILDKILEEVRK-AY 219 (304)
T ss_pred HHHHhhh------------------cCCCCCCccccccceeeeehcccceeecccC---cccCHHHHHHHHHHHHHH-HH
Confidence 5555532 3588999999999999999999999987631 234567777777776544 44
Q ss_pred hcCccccCCCCCCeEEccCCCCceEEEecccccccCHHHHHHHHHHHHHHHcCCHHHHHHHHHHcC
Q 002039 284 VDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSSSMKQALAKMFFAAAEGDHVALLSAFAEMG 349 (977)
Q Consensus 284 ~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~~~r~~~~~l~~a~~~~d~~~~~~~~~~~g 349 (977)
+.|++|+|+.+-||+|++| |.+++|||-.+...+.+.-..+ +.+|.+.+++.|.+-.
T Consensus 220 ~~GiVHGDlSefNIlV~~d--g~~~vIDwPQ~v~~~hp~a~e~-------l~RDv~nii~yFrrky 276 (304)
T COG0478 220 RRGIVHGDLSEFNILVTED--GDIVVIDWPQAVPISHPDAEEL-------LERDVENIIKYFRRKY 276 (304)
T ss_pred HcCccccCCchheEEEecC--CCEEEEeCcccccCCCCCHHHH-------HHhHHHHHHHHHHHhc
Confidence 8999999999999999966 8999999999998877654443 5688888888887643
No 106
>cd05586 STKc_Sck1_like Catalytic domain of Suppressor of loss of cAMP-dependent protein kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Fission yeast Suppressor of loss of cAMP-dependent protein kinase (Sck1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sck1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the Schizosaccharomyces pombe STK Sck1. Sck1 plays a role in trehalase activation triggered by glucose and a nitrogen source. Trehalase catalyzes the cleavage of the disaccharide trehalose to glucose. Trehalose, as a carbohydrate reserve and stress metabolite, plays an important role in the response of
Probab=99.26 E-value=1.8e-11 Score=138.40 Aligned_cols=77 Identities=21% Similarity=0.213 Sum_probs=59.0
Q ss_pred cCCceEEeeccCCCCCCChHHHHhcCCCHHHHHHHHHHHH--HHHHHhcCccccCCCCCCeEEccCCCCceEEEeccccc
Q 002039 239 SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTK 316 (977)
Q Consensus 239 ~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~ 316 (977)
....++||||++|.+|.+... ....++...+...+.+++ +..+|..|++|||+||.|||++.+ +.++|+|||++.
T Consensus 68 ~~~~~lv~e~~~~g~L~~~l~-~~~~~~~~~~~~~~~qil~al~~LH~~~ivHrDlkp~Nili~~~--~~~kl~Dfg~a~ 144 (330)
T cd05586 68 DSDLYLVTDYMSGGELFWHLQ-KEGRFSEDRAKFYIAELVLALEHLHKYDIVYRDLKPENILLDAT--GHIALCDFGLSK 144 (330)
T ss_pred CCeEEEEEcCCCCChHHHHHH-hcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeccCCHHHeEECCC--CCEEEecCCcCc
Confidence 455789999999998866532 223355555555444444 788999999999999999999865 899999999987
Q ss_pred cc
Q 002039 317 KL 318 (977)
Q Consensus 317 ~l 318 (977)
..
T Consensus 145 ~~ 146 (330)
T cd05586 145 AN 146 (330)
T ss_pred CC
Confidence 54
No 107
>cd05617 STKc_aPKC_zeta Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C zeta. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, zeta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-zeta plays a critical role in activating the glucose transport response. It is activated by glucose, insulin, and exercise through diverse pathways
Probab=99.26 E-value=2.5e-11 Score=137.02 Aligned_cols=137 Identities=18% Similarity=0.181 Sum_probs=90.0
Q ss_pred ccccccccEEEEEEec-CCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCcHHHHH
Q 002039 125 PLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEAE 203 (977)
Q Consensus 125 piasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea~ 203 (977)
.||.|++|+||+|+.+ +++.||||+.+...... ..+.. .+..|..
T Consensus 2 ~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~-~~~~~---------------------------------~~~~e~~ 47 (327)
T cd05617 2 VIGRGSYAKVLLVRLKKNDQIYAMKVVKKELVHD-DEDID---------------------------------WVQTEKH 47 (327)
T ss_pred eeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhh-hhHHH---------------------------------HHHHHHH
Confidence 5899999999999974 78999999986532100 00000 1223333
Q ss_pred HHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceee---e-cCCceEEeeccCCCCCCChHHHHhcCCCHHHHHHHHHHHH-
Q 002039 204 NTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVI---Q-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY- 278 (977)
Q Consensus 204 n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~---~-~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~- 278 (977)
.+.++.+ + ..|+.++ . ....+|||||++|.+|.+... ....++...+...+.+++
T Consensus 48 ~~~~~~~-----------------~--~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~-~~~~l~~~~~~~~~~qi~~ 107 (327)
T cd05617 48 VFEQASS-----------------N--PFLVGLHSCFQTTSRLFLVIEYVNGGDLMFHMQ-RQRKLPEEHARFYAAEICI 107 (327)
T ss_pred HHHhhcC-----------------C--CCEeeEEEEEEeCCEEEEEEeCCCCCcHHHHHH-HcCCCCHHHHHHHHHHHHH
Confidence 3333211 1 1233333 2 455689999999998865532 223355555444444443
Q ss_pred -HHHHHhcCccccCCCCCCeEEccCCCCceEEEecccccc
Q 002039 279 -AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKK 317 (977)
Q Consensus 279 -l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~ 317 (977)
+..+|..|++|+|+||.|||++.+ +.++|+|||++..
T Consensus 108 al~~lH~~~ivHrDlkp~Nili~~~--~~~kl~Dfg~~~~ 145 (327)
T cd05617 108 ALNFLHERGIIYRDLKLDNVLLDAD--GHIKLTDYGMCKE 145 (327)
T ss_pred HHHHHHHCCeeccCCCHHHEEEeCC--CCEEEecccccee
Confidence 788999999999999999999865 8999999998864
No 108
>cd05588 STKc_aPKC Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. They contain a C2-like region, instead of a calcium-binding (C2) region found in classical PKCs, in their regulatory domain. There are two aPKC isoforms, zeta and iota. aPKCs are involved in many cellular functions incl
Probab=99.26 E-value=2.1e-11 Score=137.81 Aligned_cols=139 Identities=19% Similarity=0.151 Sum_probs=89.9
Q ss_pred ccccccccEEEEEEec-CCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCcHHHHH
Q 002039 125 PLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEAE 203 (977)
Q Consensus 125 piasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea~ 203 (977)
.||.|++|.||+|+.+ +|+.||||+.+......- .++. .+..|..
T Consensus 2 ~lG~G~~g~V~~~~~~~~~~~~aiK~i~~~~~~~~-~~~~---------------------------------~~~~e~~ 47 (329)
T cd05588 2 VIGRGSYAKVLLVELKKTRRIYAMKVIKKELVNDD-EDID---------------------------------WVQTEKH 47 (329)
T ss_pred eEeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhh-hHHH---------------------------------HHHHHHH
Confidence 5899999999999974 789999999764321100 0000 0122333
Q ss_pred HHHHHHHHhCCCCCCCCCCCCCCCCC-CeEeceeee-cCCceEEeeccCCCCCCChHHHHhcCCCHHHHHHHHHHHH--H
Q 002039 204 NTRIVSANLGCKNKHEDSNKKPAYEV-DVLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--A 279 (977)
Q Consensus 204 n~~~~~~~~~~~~~~~~~~~~~~~~~-~v~vP~v~~-~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~--l 279 (977)
.+..+.+ ++ -+.+-..+. ....+|||||++|.+|.+... ....+....+...+.+++ +
T Consensus 48 il~~~~~-----------------hp~Iv~~~~~~~~~~~~~lv~e~~~~g~L~~~~~-~~~~l~~~~~~~~~~qi~~~l 109 (329)
T cd05588 48 VFETASN-----------------HPFLVGLHSCFQTESRLFFVIEFVSGGDLMFHMQ-RQRKLPEEHARFYSAEISLAL 109 (329)
T ss_pred HHHhccC-----------------CCCCCceEEEEEcCCEEEEEEeCCCCCCHHHHHH-HcCCCCHHHHHHHHHHHHHHH
Confidence 3322211 11 111222222 455689999999998865532 223455555555444444 7
Q ss_pred HHHHhcCccccCCCCCCeEEccCCCCceEEEecccccc
Q 002039 280 HQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKK 317 (977)
Q Consensus 280 ~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~ 317 (977)
..+|..|++|||+||.|||++.+ +.++|+|||++..
T Consensus 110 ~~lH~~~ivH~dlkp~Nili~~~--~~~kL~Dfg~~~~ 145 (329)
T cd05588 110 NFLHERGIIYRDLKLDNVLLDAE--GHIKLTDYGMCKE 145 (329)
T ss_pred HHHHHCCeEecCCCHHHeEECCC--CCEEECcCccccc
Confidence 88999999999999999999865 8999999999864
No 109
>cd05589 STKc_PKN Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase N. Serine/Threonine Kinases (STKs), Protein Kinase N (PKN) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved
Probab=99.26 E-value=1.9e-11 Score=137.73 Aligned_cols=143 Identities=15% Similarity=0.116 Sum_probs=91.6
Q ss_pred cccccccccEEEEEEec-CCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCcHHHH
Q 002039 124 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (977)
Q Consensus 124 ~piasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea 202 (977)
+.||.|++|.||+|+.+ +|+.||||+.++..... ..+.. .+.+|.
T Consensus 5 ~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~-~~~~~---------------------------------~l~~e~ 50 (324)
T cd05589 5 AVLGRGHFGKVLLAEYKKTGELYAIKALKKGDIIA-RDEVE---------------------------------SLMCEK 50 (324)
T ss_pred EEEeecCCEEEEEEEECCCCCEEEEEEEEHHHhhh-hhHHH---------------------------------HHHHHH
Confidence 56899999999999974 79999999986432100 00000 122232
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeee-cCCceEEeeccCCCCCCChHHHHhcCCCHHHHHHHHHHHH--H
Q 002039 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--A 279 (977)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~--l 279 (977)
+.+..++. +. ....+.+-..+. ....++||||++|.+|.... ....++...+...+.+++ +
T Consensus 51 ~~~~~~~~-l~-------------hp~i~~~~~~~~~~~~~~lv~E~~~~~~L~~~~--~~~~l~~~~~~~~~~qi~~al 114 (324)
T cd05589 51 RIFETANS-ER-------------HPFLVNLFACFQTEDHVCFVMEYAAGGDLMMHI--HTDVFSEPRAVFYAACVVLGL 114 (324)
T ss_pred HHHHhccc-cC-------------CCChhceeeEEEcCCEEEEEEcCCCCCcHHHHh--hcCCCCHHHHHHHHHHHHHHH
Confidence 22222211 11 001112222222 45578999999999886542 333455555555555544 7
Q ss_pred HHHHhcCccccCCCCCCeEEccCCCCceEEEeccccccc
Q 002039 280 HQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKL 318 (977)
Q Consensus 280 ~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l 318 (977)
..+|..|++|+|+||.||+++.+ +.++|+|||++...
T Consensus 115 ~~lH~~~ivHrdlkp~Nill~~~--~~~kL~Dfg~~~~~ 151 (324)
T cd05589 115 QYLHENKIVYRDLKLDNLLLDTE--GFVKIADFGLCKEG 151 (324)
T ss_pred HHHHhCCeEecCCCHHHeEECCC--CcEEeCcccCCccC
Confidence 88999999999999999999865 89999999987653
No 110
>cd06657 STKc_PAK4 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell mo
Probab=99.25 E-value=1.8e-11 Score=135.99 Aligned_cols=139 Identities=21% Similarity=0.223 Sum_probs=92.4
Q ss_pred cccccccccEEEEEEe-cCCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCcHHHH
Q 002039 124 TPLATASIAQVHRATL-VDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (977)
Q Consensus 124 ~piasaSigqV~~A~l-~~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea 202 (977)
..||.|++|+||+|+. .+|+.||||..+-..... +-.+.+|.
T Consensus 26 ~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~-------------------------------------~~~~~~e~ 68 (292)
T cd06657 26 IKIGEGSTGIVCIATVKSSGKLVAVKKMDLRKQQR-------------------------------------RELLFNEV 68 (292)
T ss_pred HHcCCCCCeEEEEEEEcCCCeEEEEEEecccchhH-------------------------------------HHHHHHHH
Confidence 4699999999999987 479999999753211100 00133344
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeee-cCCceEEeeccCCCCCCChHHHHhcCCCHHHHHHHHHHHH--H
Q 002039 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--A 279 (977)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~--l 279 (977)
..+..+.+ ..-+.+...+. ....++||||++|.+|.++. .....+...+...+.+++ +
T Consensus 69 ~~l~~l~h-----------------~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~--~~~~~~~~~~~~~~~ql~~~l 129 (292)
T cd06657 69 VIMRDYQH-----------------ENVVEMYNSYLVGDELWVVMEFLEGGALTDIV--THTRMNEEQIAAVCLAVLKAL 129 (292)
T ss_pred HHHHhcCC-----------------cchhheeeEEEeCCEEEEEEecCCCCcHHHHH--hcCCCCHHHHHHHHHHHHHHH
Confidence 33333321 00112222222 45678999999999987763 233445555555444444 7
Q ss_pred HHHHhcCccccCCCCCCeEEccCCCCceEEEecccccccCH
Q 002039 280 HQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 320 (977)
Q Consensus 280 ~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 320 (977)
..+|..|++|+|+||.||+++.+ +.++|+|||++..+..
T Consensus 130 ~~lH~~givH~dl~p~Nilv~~~--~~~~l~dfg~~~~~~~ 168 (292)
T cd06657 130 SVLHAQGVIHRDIKSDSILLTHD--GRVKLSDFGFCAQVSK 168 (292)
T ss_pred HHHHHCCeecCCCCHHHEEECCC--CCEEEcccccceeccc
Confidence 88999999999999999999865 8899999998876654
No 111
>KOG0585 consensus Ca2+/calmodulin-dependent protein kinase kinase beta and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=99.25 E-value=1.3e-11 Score=136.69 Aligned_cols=153 Identities=18% Similarity=0.249 Sum_probs=96.2
Q ss_pred cccccccccEEEEEEe-cCCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhccccc-CcHHH
Q 002039 124 TPLATASIAQVHRATL-VDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKEL-DFNSE 201 (977)
Q Consensus 124 ~piasaSigqV~~A~l-~~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~El-d~~~E 201 (977)
+-||+|++|.|-.|+. -+|+.|||||....-... .......+...+ .++ +.++|
T Consensus 103 ~eiG~G~yGkVkLar~~~~~~l~AiKil~K~~~~~------------~~~~~~~~a~~~------------~~~ekv~~E 158 (576)
T KOG0585|consen 103 KEIGSGQYGKVKLARDEVDGKLYAIKILPKKELRR------------QYGFPRQPAMKL------------MPIEKVRRE 158 (576)
T ss_pred hhhcCCccceEEEEeecCCCcEEEEEeechhhhhh------------hccccccccccc------------CcHHHHHHH
Confidence 5699999999999997 489999999975321000 000000000000 011 23456
Q ss_pred HHHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeee---cCCceEEeeccCCCCCCChHHHHhcCCCHHHHHHHHHHHH
Q 002039 202 AENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ---SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY 278 (977)
Q Consensus 202 a~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~---~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~ 278 (977)
...++++.+ ...|..-+|.. ++.-|||+|||..+.+....... ..+.....-..+.+.+
T Consensus 159 IailKkl~H-----------------~nVV~LiEvLDDP~s~~~YlVley~s~G~v~w~p~d~-~els~~~Ar~ylrDvv 220 (576)
T KOG0585|consen 159 IAILKKLHH-----------------PNVVKLIEVLDDPESDKLYLVLEYCSKGEVKWCPPDK-PELSEQQARKYLRDVV 220 (576)
T ss_pred HHHHHhcCC-----------------cCeeEEEEeecCcccCceEEEEEeccCCccccCCCCc-ccccHHHHHHHHHHHH
Confidence 666666643 12344445553 67789999999988887542211 1122222222222222
Q ss_pred --HHHHHhcCccccCCCCCCeEEccCCCCceEEEecccccccCH
Q 002039 279 --AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 320 (977)
Q Consensus 279 --l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 320 (977)
++.+|.+|++||||||.|+|++.+ |+++|.|||.+...+.
T Consensus 221 ~GLEYLH~QgiiHRDIKPsNLLl~~~--g~VKIsDFGVs~~~~~ 262 (576)
T KOG0585|consen 221 LGLEYLHYQGIIHRDIKPSNLLLSSD--GTVKISDFGVSNEFPQ 262 (576)
T ss_pred HHHHHHHhcCeeccccchhheEEcCC--CcEEeeccceeeeccc
Confidence 889999999999999999999966 9999999999876643
No 112
>cd07872 STKc_PCTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play
Probab=99.25 E-value=2.1e-11 Score=136.32 Aligned_cols=140 Identities=15% Similarity=0.125 Sum_probs=89.8
Q ss_pred ccccccccccEEEEEEec-CCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCcHHH
Q 002039 123 ETPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSE 201 (977)
Q Consensus 123 ~~piasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~E 201 (977)
.+.||.|++|.||+|+.+ +++.||||+.+...... .+..+.+|
T Consensus 11 ~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~------------------------------------~~~~~~~E 54 (309)
T cd07872 11 LEKLGEGTYATVFKGRSKLTENLVALKEIRLEHEEG------------------------------------APCTAIRE 54 (309)
T ss_pred EEEecccCCEEEEEEEecCCCCeEEEEEeeccccCC------------------------------------cchhHHHH
Confidence 367999999999999975 78899999875432110 01123345
Q ss_pred HHHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeee-cCCceEEeeccCCCCCCChHHHHhcCCCHHHHHHHHHHHH--
Q 002039 202 AENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY-- 278 (977)
Q Consensus 202 a~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~-- 278 (977)
...+.++++ ...+.+-..+. ....++||||+++ ++.+.........+...+...+.+++
T Consensus 55 ~~~l~~l~h-----------------~~iv~~~~~~~~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~qi~~a 116 (309)
T cd07872 55 VSLLKDLKH-----------------ANIVTLHDIVHTDKSLTLVFEYLDK-DLKQYMDDCGNIMSMHNVKIFLYQILRG 116 (309)
T ss_pred HHHHHhCCC-----------------CCcceEEEEEeeCCeEEEEEeCCCC-CHHHHHHhcCCCCCHHHHHHHHHHHHHH
Confidence 555544422 11122223332 4567899999986 44443221112234444443333333
Q ss_pred HHHHHhcCccccCCCCCCeEEccCCCCceEEEeccccccc
Q 002039 279 AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKL 318 (977)
Q Consensus 279 l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l 318 (977)
+..+|..|++|||+||+||+++.+ +.++|+|||++...
T Consensus 117 L~~lH~~~ivH~dlkp~Nill~~~--~~~kl~Dfg~~~~~ 154 (309)
T cd07872 117 LAYCHRRKVLHRDLKPQNLLINER--GELKLADFGLARAK 154 (309)
T ss_pred HHHHHHCCeecCCCCHHHEEECCC--CCEEECccccceec
Confidence 788999999999999999999865 89999999998754
No 113
>KOG0198 consensus MEKK and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=99.25 E-value=2e-11 Score=134.32 Aligned_cols=79 Identities=25% Similarity=0.280 Sum_probs=59.3
Q ss_pred CceEEeeccCCCCCCChHHHHhcCCCHHHHHHHHHHHH--HHHHHhcCccccCCCCCCeEEccCCCCceEEEeccccccc
Q 002039 241 ETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKL 318 (977)
Q Consensus 241 ~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l 318 (977)
...+.|||++|++|.+...-....+....+.....++. +.+||.+||+|||+||.|||++.. ++.++|.|||+++.+
T Consensus 90 ~~~i~mEy~~~GsL~~~~~~~g~~l~E~~v~~ytr~iL~GL~ylHs~g~vH~DiK~~NiLl~~~-~~~~KlaDFG~a~~~ 168 (313)
T KOG0198|consen 90 EYNIFMEYAPGGSLSDLIKRYGGKLPEPLVRRYTRQILEGLAYLHSKGIVHCDIKPANILLDPS-NGDVKLADFGLAKKL 168 (313)
T ss_pred eeEeeeeccCCCcHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCEeccCcccceEEEeCC-CCeEEeccCcccccc
Confidence 35789999999999987442211244444444333333 888999999999999999999962 389999999999887
Q ss_pred CH
Q 002039 319 SS 320 (977)
Q Consensus 319 ~~ 320 (977)
..
T Consensus 169 ~~ 170 (313)
T KOG0198|consen 169 ES 170 (313)
T ss_pred cc
Confidence 63
No 114
>cd06649 PKc_MEK2 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2. Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downst
Probab=99.24 E-value=4.2e-11 Score=135.44 Aligned_cols=141 Identities=19% Similarity=0.180 Sum_probs=93.4
Q ss_pred cccccccccEEEEEEec-CCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCcHHHH
Q 002039 124 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (977)
Q Consensus 124 ~piasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea 202 (977)
+.||.|++|+||+|+.+ +|..||+|+.+......... .+.+|.
T Consensus 11 ~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~------------------------------------~~~~E~ 54 (331)
T cd06649 11 SELGAGNGGVVTKVQHKPSGLIMARKLIHLEIKPAIRN------------------------------------QIIREL 54 (331)
T ss_pred EeecCCCCEEEEEEEECCCCcEEEEEEeecccCHHHHH------------------------------------HHHHHH
Confidence 56999999999999985 78999999887543211110 133455
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeee-cCCceEEeeccCCCCCCChHHHHhcCCCHHHHHHHHHHHH--H
Q 002039 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--A 279 (977)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~--l 279 (977)
+.+.++.+ ..-+.+-.++. ....++||||++|.+|.++... ...++...+.....++. +
T Consensus 55 ~~l~~l~h-----------------~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~-~~~~~~~~~~~~~~~i~~~l 116 (331)
T cd06649 55 QVLHECNS-----------------PYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKE-AKRIPEEILGKVSIAVLRGL 116 (331)
T ss_pred HHHHHCCC-----------------CCCCeEEEEEEECCEEEEEeecCCCCcHHHHHHH-cCCCCHHHHHHHHHHHHHHH
Confidence 54444422 11122222332 4556899999999999877432 22344444444333333 6
Q ss_pred HHHHh-cCccccCCCCCCeEEccCCCCceEEEecccccccCH
Q 002039 280 HQIYV-DGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 320 (977)
Q Consensus 280 ~~i~~-~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 320 (977)
..+|. .|++|+|+||.|||++.+ +.++|+|||++..+..
T Consensus 117 ~~lH~~~~ivH~dlkp~Nil~~~~--~~~kl~Dfg~~~~~~~ 156 (331)
T cd06649 117 AYLREKHQIMHRDVKPSNILVNSR--GEIKLCDFGVSGQLID 156 (331)
T ss_pred HHHhhcCCEEcCCCChhhEEEcCC--CcEEEccCcccccccc
Confidence 67786 479999999999999865 8999999999876643
No 115
>cd05069 PTKc_Yes Catalytic domain of the Protein Tyrosine Kinase, Yes. Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine an
Probab=99.23 E-value=3.4e-11 Score=130.94 Aligned_cols=139 Identities=19% Similarity=0.192 Sum_probs=93.4
Q ss_pred cccccccccEEEEEEecCCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCcHHHHH
Q 002039 124 TPLATASIAQVHRATLVDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEAE 203 (977)
Q Consensus 124 ~piasaSigqV~~A~l~~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea~ 203 (977)
+.||+|++|+||+|...++..||+|+.+++-.. +-++.+|.+
T Consensus 12 ~~ig~g~~~~v~~~~~~~~~~~~lK~~~~~~~~--------------------------------------~~~~~~E~~ 53 (260)
T cd05069 12 VKLGQGCFGEVWMGTWNGTTKVAIKTLKPGTMM--------------------------------------PEAFLQEAQ 53 (260)
T ss_pred eeecCcCCCeEEEEEEcCCceEEEEEcccCCcc--------------------------------------HHHHHHHHH
Confidence 569999999999999877778999987653210 002334544
Q ss_pred HHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeeecCCceEEeeccCCCCCCChHHHHh-cCCCHHHHHHHHHHHH--HH
Q 002039 204 NTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQSSETVLILEFMDGIRLNDCESLEA-FGVNKQKVVEEITRAY--AH 280 (977)
Q Consensus 204 n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~~~~~vLVmE~i~G~~L~~~~~~~~-~~~~~~~l~~~l~~~~--l~ 280 (977)
.+.++.+ ...+.+...+.....+++|||++|.+|.++..... ...+...+...+.++. +.
T Consensus 54 ~l~~l~h-----------------~~i~~~~~~~~~~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~al~ 116 (260)
T cd05069 54 IMKKLRH-----------------DKLVPLYAVVSEEPIYIVTEFMGKGSLLDFLKEGDGKYLKLPQLVDMAAQIADGMA 116 (260)
T ss_pred HHHhCCC-----------------CCeeeEEEEEcCCCcEEEEEcCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHH
Confidence 4444321 11122222233456789999999999877643211 1234444444444433 67
Q ss_pred HHHhcCccccCCCCCCeEEccCCCCceEEEecccccccC
Q 002039 281 QIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 319 (977)
Q Consensus 281 ~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~ 319 (977)
.+|..|++|+|+||+||+++++ +.++|+|||.+..+.
T Consensus 117 ~lH~~~i~H~dl~~~Nill~~~--~~~~l~dfg~~~~~~ 153 (260)
T cd05069 117 YIERMNYIHRDLRAANILVGDN--LVCKIADFGLARLIE 153 (260)
T ss_pred HHHhCCEeecccCcceEEEcCC--CeEEECCCccceEcc
Confidence 8899999999999999999865 889999999987664
No 116
>KOG0032 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]
Probab=99.23 E-value=3.4e-11 Score=137.41 Aligned_cols=145 Identities=19% Similarity=0.206 Sum_probs=104.4
Q ss_pred cccccccccEEEEEEec-CCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCcHHHH
Q 002039 124 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (977)
Q Consensus 124 ~piasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea 202 (977)
+.+|.|.||+||+++.+ +|+.+|+|+........-. ..-+..+|.
T Consensus 41 ~~lG~G~Fg~v~~~~~~~tg~~~A~K~i~k~~~~~~~----------------------------------~~~~v~~Ev 86 (382)
T KOG0032|consen 41 RELGRGQFGVVYLCREKSTGKEVACKVIPKRKLRGKE----------------------------------DREDVRREV 86 (382)
T ss_pred hhhCCCCceEEEEEEecCCCceeEEEEeehhhccccc----------------------------------cHHHHHHHH
Confidence 67999999999999986 5999999987532110000 111445676
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeee-cCCceEEeeccCCCCCCChHHHHhcCCCHHHHHHHHHHHH--H
Q 002039 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--A 279 (977)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~--l 279 (977)
+.++++.. ....+.++.++. ....+||||+++|+.|-+...-. .+.....+..+.+.. +
T Consensus 87 ~il~~l~~----------------hpniv~l~~~~e~~~~~~lvmEL~~GGeLfd~i~~~--~~sE~da~~~~~~il~av 148 (382)
T KOG0032|consen 87 AILQQLSG----------------HPNIVQLKDAFEDPDSVYLVMELCEGGELFDRIVKK--HYSERDAAGIIRQILEAV 148 (382)
T ss_pred HHHHhccC----------------CCCEEEEEEEEEcCCeEEEEEEecCCchHHHHHHHc--cCCHHHHHHHHHHHHHHH
Confidence 77666642 123577888887 56678999999999988764322 355544444444433 8
Q ss_pred HHHHhcCccccCCCCCCeEEccCC--CCceEEEecccccccCH
Q 002039 280 HQIYVDGFFNGDPHPGNFLVSKDP--PHRPILLDFGLTKKLSS 320 (977)
Q Consensus 280 ~~i~~~G~~H~D~hPgNIlv~~~~--~g~i~LiDFG~~~~l~~ 320 (977)
+++|..|++|||+||+|+|+.... +++++++|||++..+..
T Consensus 149 ~~lH~~gvvHrDlKpEN~L~~~~~~~~~~ik~~DFGla~~~~~ 191 (382)
T KOG0032|consen 149 KYLHSLGVVHRDLKPENLLLASKDEGSGRIKLIDFGLAKFIKP 191 (382)
T ss_pred HHHHhCCceeccCCHHHeeeccccCCCCcEEEeeCCCceEccC
Confidence 889999999999999999997542 35899999999998876
No 117
>cd05605 STKc_GRK4_like Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5,
Probab=99.23 E-value=2.9e-11 Score=133.59 Aligned_cols=143 Identities=15% Similarity=0.134 Sum_probs=95.5
Q ss_pred cccccccccEEEEEEe-cCCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCcHHHH
Q 002039 124 TPLATASIAQVHRATL-VDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (977)
Q Consensus 124 ~piasaSigqV~~A~l-~~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea 202 (977)
+.||.|++|+||+|.. .+|+.||||+......... ..+..+.+|+
T Consensus 6 ~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~----------------------------------~~~~~~~~E~ 51 (285)
T cd05605 6 RVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKR----------------------------------KGEAMALNEK 51 (285)
T ss_pred EEEecCCCeEEEEEEEcCCCceEEEEEEehhhhhhh----------------------------------hhHHHHHHHH
Confidence 4689999999999997 4799999998754221100 0112334555
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeee-cCCceEEeeccCCCCCCChHHHHh-cCCCHHHHHHHHHHHH--
Q 002039 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLEA-FGVNKQKVVEEITRAY-- 278 (977)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLVmE~i~G~~L~~~~~~~~-~~~~~~~l~~~l~~~~-- 278 (977)
..+.++.+ ...+.+...+. ....++||||++|.+|.+...... ..++...+...+.+++
T Consensus 52 ~~l~~l~h-----------------~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~~ 114 (285)
T cd05605 52 QILEKVNS-----------------RFVVSLAYAYETKDALCLVLTLMNGGDLKFHIYNMGNPGFDEERAVFYAAEITCG 114 (285)
T ss_pred HHHHhcCC-----------------CCEeeeeeeecCCCeEEEEEeccCCCcHHHHHHhcCcCCCCHHHHHHHHHHHHHH
Confidence 55554422 11122222222 345789999999999976543221 2345555555445544
Q ss_pred HHHHHhcCccccCCCCCCeEEccCCCCceEEEecccccccC
Q 002039 279 AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 319 (977)
Q Consensus 279 l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~ 319 (977)
+..+|..|++|+|++|.||+++.+ +.++|+|||++..+.
T Consensus 115 l~~lH~~~ivH~dlkp~Nil~~~~--~~~~l~Dfg~~~~~~ 153 (285)
T cd05605 115 LEDLHRERIVYRDLKPENILLDDY--GHIRISDLGLAVEIP 153 (285)
T ss_pred HHHHHHCCcEecCCCHHHEEECCC--CCEEEeeCCCceecC
Confidence 678999999999999999999865 889999999987764
No 118
>cd05070 PTKc_Fyn_Yrk Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk. Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that r
Probab=99.23 E-value=3.4e-11 Score=130.82 Aligned_cols=140 Identities=19% Similarity=0.209 Sum_probs=96.4
Q ss_pred cccccccccEEEEEEecCCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCcHHHHH
Q 002039 124 TPLATASIAQVHRATLVDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEAE 203 (977)
Q Consensus 124 ~piasaSigqV~~A~l~~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea~ 203 (977)
+.||.|++|+||+|...++..||+|+.+++... +-+|.+|+.
T Consensus 12 ~~ig~g~~~~v~~~~~~~~~~~~~k~~~~~~~~--------------------------------------~~~~~~E~~ 53 (260)
T cd05070 12 KKLGNGQFGEVWMGTWNGNTKVAVKTLKPGTMS--------------------------------------PESFLEEAQ 53 (260)
T ss_pred heeccccCceEEEEEecCCceeEEEEecCCCCC--------------------------------------HHHHHHHHH
Confidence 569999999999999888899999988764211 002445555
Q ss_pred HHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeeecCCceEEeeccCCCCCCChHHHH-hcCCCHHHHHHHHHHHH--HH
Q 002039 204 NTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQSSETVLILEFMDGIRLNDCESLE-AFGVNKQKVVEEITRAY--AH 280 (977)
Q Consensus 204 n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~~~~~vLVmE~i~G~~L~~~~~~~-~~~~~~~~l~~~l~~~~--l~ 280 (977)
-+.++.+ ...+.+.........+++|||++|.+|.+..... ...++...+...+.+++ +.
T Consensus 54 ~l~~l~~-----------------~~i~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~al~ 116 (260)
T cd05070 54 IMKKLRH-----------------DKLVQLYAVVSEEPIYIVTEYMSKGSLLDFLKDGEGRALKLPNLVDMAAQVAAGMA 116 (260)
T ss_pred HHHhcCC-----------------CceEEEEeEECCCCcEEEEEecCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHH
Confidence 4444422 1112233333356679999999999988764321 11244444444444443 67
Q ss_pred HHHhcCccccCCCCCCeEEccCCCCceEEEecccccccCH
Q 002039 281 QIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 320 (977)
Q Consensus 281 ~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 320 (977)
.+|..|++|+|++|.||+++.+ +.++|+|||.+..+..
T Consensus 117 ~lH~~~i~H~di~p~Nili~~~--~~~~l~dfg~~~~~~~ 154 (260)
T cd05070 117 YIERMNYIHRDLRSANILVGDG--LVCKIADFGLARLIED 154 (260)
T ss_pred HHHHCCcccCCCccceEEEeCC--ceEEeCCceeeeeccC
Confidence 8899999999999999999865 7899999999987643
No 119
>cd05623 STKc_MRCK_alpha Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase alpha. Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKalpha is expressed ubiquitously in many tissues. It plays a role in the regulation of peripheral actin reorganization and neurite outgrowth. It may also play a role in the transferrin iron uptake pathw
Probab=99.23 E-value=3.7e-11 Score=136.01 Aligned_cols=79 Identities=18% Similarity=0.155 Sum_probs=59.0
Q ss_pred cCCceEEeeccCCCCCCChHHHHhcCCCHHHHHHHHHHHH--HHHHHhcCccccCCCCCCeEEccCCCCceEEEeccccc
Q 002039 239 SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTK 316 (977)
Q Consensus 239 ~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~ 316 (977)
....+|||||++|++|.++.......+....+...+.++. +..+|..|++|||+||.|||++.+ +.++|+|||++.
T Consensus 73 ~~~~~lv~ey~~~g~L~~~l~~~~~~l~~~~~~~~~~qi~~al~~lH~~~iiHrDlkp~Nili~~~--~~~kL~DfG~a~ 150 (332)
T cd05623 73 ENNLYLVMDYYVGGDLLTLLSKFEDRLPEDMARFYLAEMVIAIDSVHQLHYVHRDIKPDNILMDMN--GHIRLADFGSCL 150 (332)
T ss_pred CCEEEEEEeccCCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHEEECCC--CCEEEeecchhe
Confidence 4556899999999999877542223344444433333333 778999999999999999999855 899999999987
Q ss_pred ccC
Q 002039 317 KLS 319 (977)
Q Consensus 317 ~l~ 319 (977)
.+.
T Consensus 151 ~~~ 153 (332)
T cd05623 151 KLM 153 (332)
T ss_pred ecc
Confidence 653
No 120
>cd05068 PTKc_Frk_like Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins a
Probab=99.23 E-value=2.8e-11 Score=131.51 Aligned_cols=139 Identities=17% Similarity=0.193 Sum_probs=96.4
Q ss_pred cccccccccEEEEEEecCCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCcHHHHH
Q 002039 124 TPLATASIAQVHRATLVDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEAE 203 (977)
Q Consensus 124 ~piasaSigqV~~A~l~~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea~ 203 (977)
+.||.|++|.||+|...+++.||||..+++-.. +-++.+|.+
T Consensus 12 ~~lg~g~~~~v~~~~~~~~~~v~iK~~~~~~~~--------------------------------------~~~~~~e~~ 53 (261)
T cd05068 12 RKLGAGQFGEVWEGLWNNTTPVAVKTLKPGTMD--------------------------------------PKDFLAEAQ 53 (261)
T ss_pred EEecccCCccEEEEEecCCeEEEEEeeCCCccc--------------------------------------HHHHHHHHH
Confidence 689999999999999878889999987653210 012344555
Q ss_pred HHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeee-cCCceEEeeccCCCCCCChHHHHh-cCCCHHHHHHHHHHHH--H
Q 002039 204 NTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLEA-FGVNKQKVVEEITRAY--A 279 (977)
Q Consensus 204 n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLVmE~i~G~~L~~~~~~~~-~~~~~~~l~~~l~~~~--l 279 (977)
.+.++.+ ..-+.+-..+. ....++||||++|.+|.+...... ...+...+...+.+++ +
T Consensus 54 ~l~~l~h-----------------~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l 116 (261)
T cd05068 54 IMKKLRH-----------------PKLIQLYAVCTLEEPIYIVTELMKYGSLLEYLQGGAGRALKLPQLIDMAAQVASGM 116 (261)
T ss_pred HHHHCCC-----------------CCccceeEEEecCCCeeeeeecccCCcHHHHHhccCCCCCCHHHHHHHHHHHHHHH
Confidence 5554432 00111222222 455689999999999987643221 2345555555555544 7
Q ss_pred HHHHhcCccccCCCCCCeEEccCCCCceEEEecccccccC
Q 002039 280 HQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 319 (977)
Q Consensus 280 ~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~ 319 (977)
..+|..|++|+|+||+||+++.+ +.++|+|||++..+.
T Consensus 117 ~~lH~~~i~H~dl~p~Nil~~~~--~~~~l~dfg~~~~~~ 154 (261)
T cd05068 117 AYLEAQNYIHRDLAARNVLVGEN--NICKVADFGLARVIK 154 (261)
T ss_pred HHHHhCCeeeccCCcceEEEcCC--CCEEECCcceEEEcc
Confidence 78899999999999999999965 889999999988775
No 121
>PRK13184 pknD serine/threonine-protein kinase; Reviewed
Probab=99.23 E-value=4.5e-11 Score=147.63 Aligned_cols=142 Identities=13% Similarity=0.096 Sum_probs=93.0
Q ss_pred cccccccccEEEEEEec-CCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCcHHHH
Q 002039 124 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (977)
Q Consensus 124 ~piasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea 202 (977)
+.||.|++|.||+|+.. +|+.||||+.+......- ... -.|.+|+
T Consensus 8 ~~LGkGgfG~VYlA~d~~tg~~VAIK~I~~~l~~~e----------------------------~~~------~rflrEi 53 (932)
T PRK13184 8 RLIGKGGMGEVYLAYDPVCSRRVALKKIREDLSENP----------------------------LLK------KRFLREA 53 (932)
T ss_pred EEEecCCCEEEEEEEECCCCcEEEEEEECcccccCH----------------------------HHH------HHHHHHH
Confidence 57999999999999974 799999998765332100 000 0244555
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeee-cCCceEEeeccCCCCCCChHHHHh----------cCCCHHHHH
Q 002039 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLEA----------FGVNKQKVV 271 (977)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLVmE~i~G~~L~~~~~~~~----------~~~~~~~l~ 271 (977)
+.+.++.+ ..-+.+-.++. ....++||||++|.+|.++..... .+.+...+.
T Consensus 54 ~ILs~L~H-----------------PNIVkl~~v~~d~~~lyLVMEY~eGGSL~~lL~s~~~~~~l~e~~~~~lsv~~iL 116 (932)
T PRK13184 54 KIAADLIH-----------------PGIVPVYSICSDGDPVYYTMPYIEGYTLKSLLKSVWQKESLSKELAEKTSVGAFL 116 (932)
T ss_pred HHHHhCCC-----------------cCcCeEEEEEeeCCEEEEEEEcCCCCCHHHHHHHhhhccccchhhhcccCHHHHH
Confidence 55544422 01112222222 455689999999999987643210 112223333
Q ss_pred HHHHHHH--HHHHHhcCccccCCCCCCeEEccCCCCceEEEeccccccc
Q 002039 272 EEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKL 318 (977)
Q Consensus 272 ~~l~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l 318 (977)
..+.++. +..+|..|++|||+||+||+++.+ +.++|+|||++..+
T Consensus 117 ~I~~QIa~AL~yLHs~GIIHRDLKPeNILLd~d--g~vKLiDFGLAk~i 163 (932)
T PRK13184 117 SIFHKICATIEYVHSKGVLHRDLKPDNILLGLF--GEVVILDWGAAIFK 163 (932)
T ss_pred HHHHHHHHHHHHHHHCCccccCCchheEEEcCC--CCEEEEecCcceec
Confidence 3333333 778999999999999999999865 89999999999876
No 122
>cd05081 PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3. Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as th
Probab=99.23 E-value=4.3e-11 Score=131.84 Aligned_cols=141 Identities=21% Similarity=0.236 Sum_probs=92.9
Q ss_pred cccccccccEEEEEEe-----cCCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCc
Q 002039 124 TPLATASIAQVHRATL-----VDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDF 198 (977)
Q Consensus 124 ~piasaSigqV~~A~l-----~~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~ 198 (977)
+.||+|++|.||+|+. .+|+.||||+.+....... . .+
T Consensus 10 ~~lg~g~~g~v~~~~~~~~~~~~~~~v~iK~~~~~~~~~~---------------------------~----------~~ 52 (284)
T cd05081 10 QQLGKGNFGSVELCRYDPLQDNTGEVVAVKKLQHSTAEHL---------------------------R----------DF 52 (284)
T ss_pred eeccCCCCceEEEEEecCCcCCCCcEEEEEEeccCCHHHH---------------------------H----------HH
Confidence 5799999999999984 3689999998754322110 0 13
Q ss_pred HHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeee---cCCceEEeeccCCCCCCChHHHHhcCCCHHHHHHHHH
Q 002039 199 NSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ---SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEIT 275 (977)
Q Consensus 199 ~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~---~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~ 275 (977)
.+|.+.+.++.+ ..-+.+..+.. ....++||||++|.+|.++........+...+...+.
T Consensus 53 ~~e~~~l~~l~h-----------------~~iv~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~l~~~~~~~~~~ 115 (284)
T cd05081 53 EREIEILKSLQH-----------------DNIVKYKGVCYSAGRRNLRLVMEYLPYGSLRDYLQKHRERLDHRKLLLYAS 115 (284)
T ss_pred HHHHHHHHhCCC-----------------CCeeEEEEEEccCCCCceEEEEEecCCCCHHHHHHhcCcCCCHHHHHHHHH
Confidence 344444444321 00111111211 1345799999999999877432222344454444444
Q ss_pred HHH--HHHHHhcCccccCCCCCCeEEccCCCCceEEEecccccccCH
Q 002039 276 RAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 320 (977)
Q Consensus 276 ~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 320 (977)
+++ +..+|..|++|+|+||.||+++.+ ++++|+|||++..+..
T Consensus 116 ~l~~aL~~LH~~~i~H~dlkp~nili~~~--~~~~l~dfg~~~~~~~ 160 (284)
T cd05081 116 QICKGMEYLGSKRYVHRDLATRNILVESE--NRVKIGDFGLTKVLPQ 160 (284)
T ss_pred HHHHHHHHHHHCCceeccCCHhhEEECCC--CeEEECCCcccccccC
Confidence 443 778999999999999999999865 8899999999887643
No 123
>cd05607 STKc_GRK7 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 7. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK7 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK7, also called iodopsin kinase, belongs to the visual gr
Probab=99.23 E-value=4.4e-11 Score=131.62 Aligned_cols=80 Identities=19% Similarity=0.234 Sum_probs=59.6
Q ss_pred cCCceEEeeccCCCCCCChHHHH-hcCCCHHHHHHHHHHHH--HHHHHhcCccccCCCCCCeEEccCCCCceEEEecccc
Q 002039 239 SSETVLILEFMDGIRLNDCESLE-AFGVNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLT 315 (977)
Q Consensus 239 ~~~~vLVmE~i~G~~L~~~~~~~-~~~~~~~~l~~~l~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~ 315 (977)
....++||||++|.+|.+..... ..+.+...+...+.++. +..+|..|++|+|+||.||+++.+ +.++|+|||++
T Consensus 65 ~~~~~lv~e~~~g~~L~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~dikp~Nili~~~--~~~~l~Dfg~~ 142 (277)
T cd05607 65 KTHLCLVMSLMNGGDLKYHIYNVGERGLEMERVIHYSAQITCGILHLHSMDIVYRDMKPENVLLDDQ--GNCRLSDLGLA 142 (277)
T ss_pred CCeEEEEEecCCCCCHHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHHCCEEEccCChHhEEEcCC--CCEEEeeceee
Confidence 45578999999999987654221 12345555444444433 788999999999999999999865 88999999998
Q ss_pred cccCH
Q 002039 316 KKLSS 320 (977)
Q Consensus 316 ~~l~~ 320 (977)
..+..
T Consensus 143 ~~~~~ 147 (277)
T cd05607 143 VELKD 147 (277)
T ss_pred eecCC
Confidence 76643
No 124
>KOG1165 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=99.22 E-value=2.1e-11 Score=129.63 Aligned_cols=138 Identities=16% Similarity=0.268 Sum_probs=104.8
Q ss_pred cccccccccEEEEEEe-cCCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCcHHHH
Q 002039 124 TPLATASIAQVHRATL-VDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (977)
Q Consensus 124 ~piasaSigqV~~A~l-~~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea 202 (977)
+.||.||||..+.|+. -++++||||.-.-. .+.. .++.|-
T Consensus 34 kKIGeGsFG~lf~G~Nl~nne~VAIKfEPrk-------------------------S~AP--------------QLrdEY 74 (449)
T KOG1165|consen 34 KKIGEGSFGVLFLGKNLYNNEPVAIKFEPRK-------------------------SEAP--------------QLRDEY 74 (449)
T ss_pred cccccCcceeeecccccccCceEEEEecccc-------------------------CCcc--------------hHHHHH
Confidence 5799999999999984 68999999964211 1111 122333
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeee---c-CCceEEeeccCCCCCCChHHHHhcCCCHHHHHHHHHHHH
Q 002039 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ---S-SETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY 278 (977)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~---~-~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~ 278 (977)
+.-+.+.. ..-||.||. | -.++||||.+ |.+|.|+..+....++.+.++...++.+
T Consensus 75 r~YKlL~g-------------------~~GIP~vYYFGqeG~~NiLVidLL-GPSLEDLFD~CgR~FSvKTV~miA~Qmi 134 (449)
T KOG1165|consen 75 RTYKLLGG-------------------TEGIPQVYYFGQEGKYNILVIDLL-GPSLEDLFDLCGRRFSVKTVAMIAKQMI 134 (449)
T ss_pred HHHHHHcC-------------------CCCCCceeeeccccchhhhhhhhh-CcCHHHHHHHhcCcccHHhHHHHHHHHH
Confidence 33333321 346888886 4 3479999988 9999999988888899998888888877
Q ss_pred --HHHHHhcCccccCCCCCCeEEccCC---CCceEEEecccccccCH
Q 002039 279 --AHQIYVDGFFNGDPHPGNFLVSKDP---PHRPILLDFGLTKKLSS 320 (977)
Q Consensus 279 --l~~i~~~G~~H~D~hPgNIlv~~~~---~g~i~LiDFG~~~~l~~ 320 (977)
++.+|.+.+|-||+||.|+||...+ ...|.+|||||++++-+
T Consensus 135 ~rie~vH~k~LIYRDIKPdNFLIGrp~~k~~n~IhiiDFGmAK~YrD 181 (449)
T KOG1165|consen 135 TRIEYVHEKDLIYRDIKPDNFLIGRPGTKDANVIHIIDFGMAKEYRD 181 (449)
T ss_pred HHHHHHHhcceeecccCccceeecCCCCCCCceEEEEeccchhhhcC
Confidence 8899999999999999999997532 24589999999998744
No 125
>cd05632 STKc_GRK5 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK5 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK5 is widely expressed in many tissues. It associates with
Probab=99.22 E-value=3.7e-11 Score=132.78 Aligned_cols=143 Identities=15% Similarity=0.123 Sum_probs=96.5
Q ss_pred cccccccccEEEEEEe-cCCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCcHHHH
Q 002039 124 TPLATASIAQVHRATL-VDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (977)
Q Consensus 124 ~piasaSigqV~~A~l-~~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea 202 (977)
+.||+|++|.||+|+. .+|+.||||+..+.....-. .+..+.+|.
T Consensus 6 ~~lg~G~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~----------------------------------~~~~~~~E~ 51 (285)
T cd05632 6 RVLGKGGFGEVCACQVRATGKMYACKRLEKKRIKKRK----------------------------------GESMALNEK 51 (285)
T ss_pred EEEecCCCeEEEEEEECCCCcEEEEEEeehhhhhhhh----------------------------------HHHHHHHHH
Confidence 5699999999999997 47999999987543211000 001234455
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeee-cCCceEEeeccCCCCCCChHHHH-hcCCCHHHHHHHHHHHH--
Q 002039 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLE-AFGVNKQKVVEEITRAY-- 278 (977)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLVmE~i~G~~L~~~~~~~-~~~~~~~~l~~~l~~~~-- 278 (977)
+.+.++++ ...+.+...+. ....++||||++|.+|.+..... ...++...+...+.+++
T Consensus 52 ~il~~l~~-----------------~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~ql~~~ 114 (285)
T cd05632 52 QILEKVNS-----------------QFVVNLAYAYETKDALCLVLTIMNGGDLKFHIYNMGNPGFEEERALFYAAEILCG 114 (285)
T ss_pred HHHHHcCC-----------------cCceeEEEEEecCCEEEEEEEeccCccHHHHHHHhcCCCCCHHHHHHHHHHHHHH
Confidence 55555432 11122333333 34568999999999887654322 12355666666555554
Q ss_pred HHHHHhcCccccCCCCCCeEEccCCCCceEEEecccccccC
Q 002039 279 AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 319 (977)
Q Consensus 279 l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~ 319 (977)
+..+|..|++|+|+||.||+++.+ +.++|+|||++..++
T Consensus 115 l~~lH~~~iiH~dikp~Nili~~~--~~~kl~Dfg~~~~~~ 153 (285)
T cd05632 115 LEDLHRENTVYRDLKPENILLDDY--GHIRISDLGLAVKIP 153 (285)
T ss_pred HHHHHhCCeeecCCCHHHEEECCC--CCEEEecCCcceecC
Confidence 788999999999999999999865 789999999987654
No 126
>PTZ00426 cAMP-dependent protein kinase catalytic subunit; Provisional
Probab=99.22 E-value=3.5e-11 Score=136.70 Aligned_cols=143 Identities=21% Similarity=0.143 Sum_probs=91.2
Q ss_pred cccccccccEEEEEEec--CCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCcHHH
Q 002039 124 TPLATASIAQVHRATLV--DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSE 201 (977)
Q Consensus 124 ~piasaSigqV~~A~l~--~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~E 201 (977)
+.||+|++|.||+|+.+ ++..||||+....... .. . ..+ .+.+|
T Consensus 36 ~~ig~G~~g~Vy~a~~~~~~~~~vavK~~~~~~~~--~~--~--------------------~~~----------~~~~E 81 (340)
T PTZ00426 36 RTLGTGSFGRVILATYKNEDFPPVAIKRFEKSKII--KQ--K--------------------QVD----------HVFSE 81 (340)
T ss_pred EEEeecCCeEEEEEEEECCCCeEEEEEEEEHHHhh--hh--h--------------------hHH----------HHHHH
Confidence 68999999999999864 3468999976421100 00 0 000 13345
Q ss_pred HHHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeee-cCCceEEeeccCCCCCCChHHHHhcCCCHHHHHHHHHHHH--
Q 002039 202 AENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY-- 278 (977)
Q Consensus 202 a~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~-- 278 (977)
...+..+.+ ..-+.+-..+. ....+|||||++|.+|.+.... ...++...+...+.+++
T Consensus 82 ~~~l~~l~h-----------------p~Iv~~~~~~~~~~~~~lv~Ey~~~g~L~~~i~~-~~~~~~~~~~~~~~qi~~a 143 (340)
T PTZ00426 82 RKILNYINH-----------------PFCVNLYGSFKDESYLYLVLEFVIGGEFFTFLRR-NKRFPNDVGCFYAAQIVLI 143 (340)
T ss_pred HHHHHhCCC-----------------CCCcceEEEEEeCCEEEEEEeCCCCCcHHHHHHH-cCCCCHHHHHHHHHHHHHH
Confidence 554444422 00111222222 4556899999999998776432 22344444333333333
Q ss_pred HHHHHhcCccccCCCCCCeEEccCCCCceEEEecccccccCH
Q 002039 279 AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 320 (977)
Q Consensus 279 l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 320 (977)
+..+|..|++|||+||+|||++.+ +.++|+|||++..++.
T Consensus 144 L~~LH~~~ivHrDLkp~NILl~~~--~~ikL~DFG~a~~~~~ 183 (340)
T PTZ00426 144 FEYLQSLNIVYRDLKPENLLLDKD--GFIKMTDFGFAKVVDT 183 (340)
T ss_pred HHHHHHCCeEccCCCHHHEEECCC--CCEEEecCCCCeecCC
Confidence 788999999999999999999855 8999999999987653
No 127
>cd05104 PTKc_Kit Catalytic domain of the Protein Tyrosine Kinase, Kit. Protein Tyrosine Kinase (PTK) family; Kit (or c-Kit); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Kit is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of Kit to its ligand, the stem-cell factor (SCF), leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem ce
Probab=99.22 E-value=4.9e-11 Score=137.45 Aligned_cols=50 Identities=14% Similarity=0.230 Sum_probs=39.4
Q ss_pred HHHHHHHHHH--HHHHHhcCccccCCCCCCeEEccCCCCceEEEecccccccCH
Q 002039 269 KVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 320 (977)
Q Consensus 269 ~l~~~l~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 320 (977)
.+...+.++. +..+|..|++|+|+||.|||++.+ +.++|+|||++..+..
T Consensus 215 ~~~~~~~qi~~~l~~lH~~~ivH~Dlkp~Nill~~~--~~~kl~DfG~a~~~~~ 266 (375)
T cd05104 215 DLLSFSYQVAKGMSFLASKNCIHRDLAARNILLTHG--RITKICDFGLARDIRN 266 (375)
T ss_pred HHHHHHHHHHHHHHHHHHCCeeccCCchhhEEEECC--CcEEEecCccceeccC
Confidence 3334334433 778899999999999999999855 7899999999887643
No 128
>cd05582 STKc_RSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase. Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylate
Probab=99.21 E-value=4.1e-11 Score=134.67 Aligned_cols=141 Identities=21% Similarity=0.216 Sum_probs=91.7
Q ss_pred cccccccccEEEEEEe----cCCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCcH
Q 002039 124 TPLATASIAQVHRATL----VDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFN 199 (977)
Q Consensus 124 ~piasaSigqV~~A~l----~~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~ 199 (977)
+.||.|++|.||+++. .+|+.||||+.+...... . ....+.
T Consensus 2 ~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~--~---------------------------------~~~~~~ 46 (318)
T cd05582 2 KVLGQGSFGKVFLVRKITGPDAGQLYAMKVLKKATLKV--R---------------------------------DRVRTK 46 (318)
T ss_pred ceeeeCCCEEEEEEEEeccCCCCCEEEEEEEEHHHhhh--h---------------------------------hHHHHH
Confidence 4689999999999975 368999999875321100 0 000123
Q ss_pred HHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeee-cCCceEEeeccCCCCCCChHHHHhcCCCHHHHHHHHHHHH
Q 002039 200 SEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY 278 (977)
Q Consensus 200 ~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~ 278 (977)
+|.+.+.++.+ ..-+.+-..+. ....+|||||++|.+|.+... ....++...+...+.+++
T Consensus 47 ~E~~~l~~l~h-----------------~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~-~~~~l~~~~~~~~~~qi~ 108 (318)
T cd05582 47 MERDILAEVNH-----------------PFIVKLHYAFQTEGKLYLILDFLRGGDLFTRLS-KEVMFTEEDVKFYLAELA 108 (318)
T ss_pred HHHHHHHhCCC-----------------CCcccEEEEEEcCCEEEEEEcCCCCCcHHHHHH-HcCCCCHHHHHHHHHHHH
Confidence 45554444422 00111112222 455689999999998876532 122345555554444443
Q ss_pred --HHHHHhcCccccCCCCCCeEEccCCCCceEEEecccccccC
Q 002039 279 --AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 319 (977)
Q Consensus 279 --l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~ 319 (977)
+..+|..|++|+|+||.||+++.+ +.++|+|||++....
T Consensus 109 ~~l~~lH~~~i~H~dlkp~Nil~~~~--~~~kL~Dfg~~~~~~ 149 (318)
T cd05582 109 LALDHLHSLGIIYRDLKPENILLDEE--GHIKLTDFGLSKESI 149 (318)
T ss_pred HHHHHHHHCCEecCCCCHHHeEECCC--CcEEEeeccCCcccC
Confidence 788999999999999999999865 899999999987653
No 129
>PRK09605 bifunctional UGMP family protein/serine/threonine protein kinase; Validated
Probab=99.21 E-value=1.2e-10 Score=140.33 Aligned_cols=141 Identities=21% Similarity=0.343 Sum_probs=95.3
Q ss_pred CccccccccccEEEEEEecCCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCcHHH
Q 002039 122 VETPLATASIAQVHRATLVDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSE 201 (977)
Q Consensus 122 d~~piasaSigqV~~A~l~~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~E 201 (977)
..+.||.|++|.||+|+. .++.+++|+..+..... .++. +.. ..-.+.+|
T Consensus 337 ~~~~iG~G~~g~Vy~~~~-~~~~~v~k~~~~~~~~~--~~~~----------------------~~~-----~~~~~~~E 386 (535)
T PRK09605 337 PDHLIGKGAEADIKKGEY-LGRDAVIKERVPKGYRH--PELD----------------------ERL-----RTERTRAE 386 (535)
T ss_pred ccceeccCCcEEEEEEee-cCccceeEEEecccccc--hhHH----------------------HHH-----HHHHHHHH
Confidence 357899999999999987 45567777654321100 0000 000 01135677
Q ss_pred HHHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeee--cCCceEEeeccCCCCCCChHHHHhcCCCHHHHHHHHHHHHH
Q 002039 202 AENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ--SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAYA 279 (977)
Q Consensus 202 a~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~--~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~l 279 (977)
++.+.++++ ..+.+|.++. ....+|||||++|.+|.+... ....++..+.+. +
T Consensus 387 ~~~l~~l~~------------------~~i~~p~~~~~~~~~~~lv~E~~~g~~L~~~l~------~~~~~~~~i~~~-L 441 (535)
T PRK09605 387 ARLLSEARR------------------AGVPTPVIYDVDPEEKTIVMEYIGGKDLKDVLE------GNPELVRKVGEI-V 441 (535)
T ss_pred HHHHHhhcc------------------cCCCeeEEEEEeCCCCEEEEEecCCCcHHHHHH------HHHHHHHHHHHH-H
Confidence 777777643 2355566654 457899999999999987642 123445544443 6
Q ss_pred HHHHhcCccccCCCCCCeEEccCCCCceEEEecccccccCH
Q 002039 280 HQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 320 (977)
Q Consensus 280 ~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 320 (977)
.++|..|++|||+||+|||++ + ++++|+|||+++..+.
T Consensus 442 ~~lH~~giiHrDlkp~NILl~-~--~~~~liDFGla~~~~~ 479 (535)
T PRK09605 442 AKLHKAGIVHGDLTTSNFIVR-D--DRLYLIDFGLGKYSDL 479 (535)
T ss_pred HHHHhCCCccCCCChHHEEEE-C--CcEEEEeCcccccCCc
Confidence 789999999999999999993 3 7899999999987654
No 130
>KOG0582 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.21 E-value=4.3e-11 Score=132.01 Aligned_cols=141 Identities=19% Similarity=0.258 Sum_probs=98.8
Q ss_pred cccccccccEEEEEEe-cCCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCcHHHH
Q 002039 124 TPLATASIAQVHRATL-VDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (977)
Q Consensus 124 ~piasaSigqV~~A~l-~~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea 202 (977)
+-||.|.-++||+|+. +.++.||||+..= + ....|+. .+++|.
T Consensus 32 e~IG~G~sa~V~~A~c~p~~e~VAIK~inL--E-kc~~~ld---------------------------------~l~kE~ 75 (516)
T KOG0582|consen 32 EVIGVGASAVVYLARCIPTNEVVAIKIINL--E-KCNNDLD---------------------------------ALRKEV 75 (516)
T ss_pred EEEeccceeEeeeeeecccCCEEEEEEeeh--h-hhhhhHH---------------------------------HHHHHH
Confidence 4589998899999996 5789999997631 1 1111211 134566
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCe-Eeceeee-cCCceEEeeccCCCCCCChHHH-HhcCCCHHHHHHHHHHHH-
Q 002039 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDV-LIPEVIQ-SSETVLILEFMDGIRLNDCESL-EAFGVNKQKVVEEITRAY- 278 (977)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v-~vP~v~~-~~~~vLVmE~i~G~~L~~~~~~-~~~~~~~~~l~~~l~~~~- 278 (977)
.++..+.| +++ ..-..+- ....++||.|+.|+++.++..- -..|++...|+..+.+++
T Consensus 76 ~~msl~~H------------------PNIv~~~~sFvv~~~LWvVmpfMa~GS~ldIik~~~~~Gl~E~~Ia~iLre~Lk 137 (516)
T KOG0582|consen 76 QTMSLIDH------------------PNIVTYHCSFVVDSELWVVMPFMAGGSLLDIIKTYYPDGLEEASIATILREVLK 137 (516)
T ss_pred HHhhhcCC------------------CCcceEEEEEEecceeEEeehhhcCCcHHHHHHHHccccccHHHHHHHHHHHHH
Confidence 66555432 221 1111111 5667999999999999887542 234677666776666665
Q ss_pred -HHHHHhcCccccCCCCCCeEEccCCCCceEEEecccccccCH
Q 002039 279 -AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 320 (977)
Q Consensus 279 -l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 320 (977)
+.++|..|.+|||+|+|||||+.+ |.|+|.|||....+-+
T Consensus 138 aL~YLH~~G~IHRdvKAgnILi~~d--G~VkLadFgvsa~l~~ 178 (516)
T KOG0582|consen 138 ALDYLHQNGHIHRDVKAGNILIDSD--GTVKLADFGVSASLFD 178 (516)
T ss_pred HHHHHHhcCceecccccccEEEcCC--CcEEEcCceeeeeecc
Confidence 889999999999999999999966 9999999998776643
No 131
>cd05071 PTKc_Src Catalytic domain of the Protein Tyrosine Kinase, Src. Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is invo
Probab=99.21 E-value=4.6e-11 Score=130.22 Aligned_cols=140 Identities=19% Similarity=0.201 Sum_probs=94.2
Q ss_pred cccccccccEEEEEEecCCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCcHHHHH
Q 002039 124 TPLATASIAQVHRATLVDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEAE 203 (977)
Q Consensus 124 ~piasaSigqV~~A~l~~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea~ 203 (977)
+.||.|++|.||+|+..++..||||+.++.... +-+|.+|..
T Consensus 12 ~~lg~g~~~~v~~~~~~~~~~valK~~~~~~~~--------------------------------------~~~~~~E~~ 53 (262)
T cd05071 12 VKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMS--------------------------------------PEAFLQEAQ 53 (262)
T ss_pred eecCCCCCCcEEEEEecCCceEEEEecccCccC--------------------------------------HHHHHHHHH
Confidence 468999999999999877678999987642110 002445555
Q ss_pred HHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeeecCCceEEeeccCCCCCCChHHHH-hcCCCHHHHHHHHHHHH--HH
Q 002039 204 NTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQSSETVLILEFMDGIRLNDCESLE-AFGVNKQKVVEEITRAY--AH 280 (977)
Q Consensus 204 n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~~~~~vLVmE~i~G~~L~~~~~~~-~~~~~~~~l~~~l~~~~--l~ 280 (977)
.+.++.+ ..-+.+.........++||||++|.+|.++.... ....+...+...+.+++ +.
T Consensus 54 ~l~~l~~-----------------~~i~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~aL~ 116 (262)
T cd05071 54 VMKKLRH-----------------EKLVQLYAVVSEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMA 116 (262)
T ss_pred HHHhCCC-----------------CCcceEEEEECCCCcEEEEEcCCCCcHHHHHhhccccCCCHHHHHHHHHHHHHHHH
Confidence 5554422 0112222222245578999999999988764321 11234444444444443 67
Q ss_pred HHHhcCccccCCCCCCeEEccCCCCceEEEecccccccCH
Q 002039 281 QIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 320 (977)
Q Consensus 281 ~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 320 (977)
.+|..|++|+|+||+||+++.+ +.++|+|||.+..+..
T Consensus 117 ~lH~~~i~H~dl~p~Nill~~~--~~~~L~dfg~~~~~~~ 154 (262)
T cd05071 117 YVERMNYVHRDLRAANILVGEN--LVCKVADFGLARLIED 154 (262)
T ss_pred HHHHCCccccccCcccEEEcCC--CcEEeccCCceeeccc
Confidence 8999999999999999999865 8899999999987754
No 132
>cd05114 PTKc_Tec_Rlk Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin h
Probab=99.21 E-value=5.2e-11 Score=129.07 Aligned_cols=139 Identities=21% Similarity=0.200 Sum_probs=94.0
Q ss_pred cccccccccEEEEEEecCCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCcHHHHH
Q 002039 124 TPLATASIAQVHRATLVDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEAE 203 (977)
Q Consensus 124 ~piasaSigqV~~A~l~~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea~ 203 (977)
+.||.|++|.||+|+.+++..||+|..+.+-. .+-+|.+|+.
T Consensus 10 ~~lg~G~~~~vy~~~~~~~~~~a~K~~~~~~~--------------------------------------~~~~~~~e~~ 51 (256)
T cd05114 10 KELGSGQFGVVHLGKWRAQIKVAIKAINEGAM--------------------------------------SEEDFIEEAK 51 (256)
T ss_pred eEecCCcCceEEEEEeccCceEEEEecccCCc--------------------------------------cHHHHHHHHH
Confidence 56999999999999998888999997653211 0113445555
Q ss_pred HHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeee-cCCceEEeeccCCCCCCChHHHHhcCCCHHHHHHHHHHHH--HH
Q 002039 204 NTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--AH 280 (977)
Q Consensus 204 n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~--l~ 280 (977)
-+.++.+ ..-+.+...+. ....++||||++|.+|.+.........+...+...+.++. +.
T Consensus 52 ~l~~l~h-----------------~~i~~~~~~~~~~~~~~iv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~ 114 (256)
T cd05114 52 VMMKLSH-----------------PKLVQLYGVCTQQKPLYIVTEFMENGCLLNYLRQRQGKLSKDMLLSMCQDVCEGME 114 (256)
T ss_pred HHHHCCC-----------------CCceeEEEEEccCCCEEEEEEcCCCCcHHHHHHhCccCCCHHHHHHHHHHHHHHHH
Confidence 5554422 00112222222 4556899999999999876432222345444444444443 67
Q ss_pred HHHhcCccccCCCCCCeEEccCCCCceEEEecccccccC
Q 002039 281 QIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 319 (977)
Q Consensus 281 ~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~ 319 (977)
.+|..|++|+|++|+||+++.+ +.++|+|||.+..+.
T Consensus 115 ~lH~~~i~H~dl~p~ni~i~~~--~~~kl~d~g~~~~~~ 151 (256)
T cd05114 115 YLERNSFIHRDLAARNCLVSST--GVVKVSDFGMTRYVL 151 (256)
T ss_pred HHHHCCccccccCcceEEEcCC--CeEEECCCCCccccC
Confidence 8999999999999999999855 889999999987653
No 133
>PTZ00267 NIMA-related protein kinase; Provisional
Probab=99.21 E-value=4.5e-11 Score=142.14 Aligned_cols=139 Identities=18% Similarity=0.126 Sum_probs=93.2
Q ss_pred ccccccccccEEEEEEec-C-CCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCcHH
Q 002039 123 ETPLATASIAQVHRATLV-D-GRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNS 200 (977)
Q Consensus 123 ~~piasaSigqV~~A~l~-~-G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~ 200 (977)
.+.+|.|++|.||+|... + ++.||+|......... ...+++
T Consensus 72 ~~~lg~G~~g~vy~a~~~~~~~~~vv~K~~~~~~~~~-------------------------------------~~~~~~ 114 (478)
T PTZ00267 72 TTLVGRNPTTAAFVATRGSDPKEKVVAKFVMLNDERQ-------------------------------------AAYARS 114 (478)
T ss_pred EEEEEeCCCcEEEEEEEcCCCCeEEEEEEcccCCHHH-------------------------------------HHHHHH
Confidence 367999999999999864 4 6889999643221100 001234
Q ss_pred HHHHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeee----cCCceEEeeccCCCCCCChHHH--H-hcCCCHHHHHHH
Q 002039 201 EAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ----SSETVLILEFMDGIRLNDCESL--E-AFGVNKQKVVEE 273 (977)
Q Consensus 201 Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~----~~~~vLVmE~i~G~~L~~~~~~--~-~~~~~~~~l~~~ 273 (977)
|+..+..+.+ ..|++++. ....+|||||++|++|.+.... . ...++...+...
T Consensus 115 E~~~l~~l~H--------------------pniv~~~~~~~~~~~~~lv~E~~~gg~L~~~l~~~~~~~~~l~~~~~~~i 174 (478)
T PTZ00267 115 ELHCLAACDH--------------------FGIVKHFDDFKSDDKLLLIMEYGSGGDLNKQIKQRLKEHLPFQEYEVGLL 174 (478)
T ss_pred HHHHHHhCCC--------------------CCEeEEEEEEEECCEEEEEEECCCCCCHHHHHHHHHhccCCCCHHHHHHH
Confidence 5554444322 22344432 4667999999999999875321 1 122444444444
Q ss_pred HHHHH--HHHHHhcCccccCCCCCCeEEccCCCCceEEEecccccccCH
Q 002039 274 ITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 320 (977)
Q Consensus 274 l~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 320 (977)
+.++. +..+|..|++||||||.|||++.+ +.++|+|||++..+..
T Consensus 175 ~~qi~~aL~~lH~~~ivHrDlkp~NIll~~~--~~~kL~DFgla~~~~~ 221 (478)
T PTZ00267 175 FYQIVLALDEVHSRKMMHRDLKSANIFLMPT--GIIKLGDFGFSKQYSD 221 (478)
T ss_pred HHHHHHHHHHHHhCCEEECCcCHHhEEECCC--CcEEEEeCcCceecCC
Confidence 44433 788999999999999999999865 8999999999987754
No 134
>cd05067 PTKc_Lck_Blk Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk. Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Sr
Probab=99.21 E-value=5.1e-11 Score=129.45 Aligned_cols=139 Identities=19% Similarity=0.223 Sum_probs=96.1
Q ss_pred cccccccccEEEEEEecCCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCcHHHHH
Q 002039 124 TPLATASIAQVHRATLVDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEAE 203 (977)
Q Consensus 124 ~piasaSigqV~~A~l~~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea~ 203 (977)
+.||+|++|.||+|..++++.||||+.+...... -++.+|..
T Consensus 12 ~~ig~G~~g~v~~~~~~~~~~~a~K~~~~~~~~~--------------------------------------~~~~~E~~ 53 (260)
T cd05067 12 KKLGAGQFGEVWMGYYNGHTKVAIKSLKQGSMSP--------------------------------------EAFLAEAN 53 (260)
T ss_pred eeeccCccceEEeeecCCCceEEEEEecCCCCcH--------------------------------------HHHHHHHH
Confidence 5699999999999999899999999876432110 02344554
Q ss_pred HHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeeecCCceEEeeccCCCCCCChHHHH-hcCCCHHHHHHHHHHHH--HH
Q 002039 204 NTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQSSETVLILEFMDGIRLNDCESLE-AFGVNKQKVVEEITRAY--AH 280 (977)
Q Consensus 204 n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~~~~~vLVmE~i~G~~L~~~~~~~-~~~~~~~~l~~~l~~~~--l~ 280 (977)
.+.++.+ ...+.+..++.....+++|||++|.+|.+..... ....+...+...+.+++ +.
T Consensus 54 ~l~~l~h-----------------~~i~~~~~~~~~~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~i~~~i~~al~ 116 (260)
T cd05067 54 LMKQLQH-----------------PRLVRLYAVVTQEPIYIITEYMENGSLVDFLKTPEGIKLTINKLIDMAAQIAEGMA 116 (260)
T ss_pred HHHhcCC-----------------cCeeeEEEEEccCCcEEEEEcCCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHH
Confidence 4444422 1112222333345679999999999988764321 12344455554444444 78
Q ss_pred HHHhcCccccCCCCCCeEEccCCCCceEEEecccccccC
Q 002039 281 QIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 319 (977)
Q Consensus 281 ~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~ 319 (977)
.+|..|++|+|+||.||+++.+ +.+.|+|||++..+.
T Consensus 117 ~LH~~~i~H~dl~p~ni~i~~~--~~~~l~dfg~~~~~~ 153 (260)
T cd05067 117 FIERKNYIHRDLRAANILVSET--LCCKIADFGLARLIE 153 (260)
T ss_pred HHhcCCeecccccHHhEEEcCC--CCEEEccCcceeecC
Confidence 8999999999999999999865 889999999998765
No 135
>PF00069 Pkinase: Protein kinase domain Protein kinase; unclassified specificity. Serine/Threonine protein kinases, catalytic domain Tyrosine kinase, catalytic domain; InterPro: IPR017442 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Eukaryotic protein kinases [, , , , ] are enzymes that belong to a very extensive family of proteins which share a conserved catalytic core common with both serine/threonine and tyrosine protein kinases. There are a number of conserved regions in the catalytic domain of protein kinases. In the N-terminal extremity of the catalytic domain there is a glycine-rich stretch of residues in the vicinity of a lysine residue, which has been shown to be involved in ATP binding. In the central part of the catalytic domain there is a conserved aspartic acid residue which is important for the catalytic activity of the enzyme []. This entry includes protein kinases from eukaryotes and viruses and may include some bacterial hits too.; GO: 0004672 protein kinase activity, 0005524 ATP binding, 0006468 protein phosphorylation; PDB: 3GC7_A 3ZYA_A 3MPT_A 3NEW_A 3MVM_A 1R3C_A 2FST_X 3E93_A 3HV5_B 3OCG_A ....
Probab=99.21 E-value=4.5e-11 Score=129.38 Aligned_cols=140 Identities=20% Similarity=0.262 Sum_probs=97.4
Q ss_pred cccccccccEEEEEEec-CCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCcHHHH
Q 002039 124 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (977)
Q Consensus 124 ~piasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea 202 (977)
+.||+|++|.||+|+.. +++.||+|+....-...-... ...+|+
T Consensus 5 ~~lg~G~~g~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~-----------------------------------~~~~e~ 49 (260)
T PF00069_consen 5 KKLGSGGFGTVYKAKNKKNGQKVAVKIIDKSEIEEEERE-----------------------------------ENIREI 49 (260)
T ss_dssp EEEEEESSEEEEEEEETTTTEEEEEEEEESTTHHHHHHH-----------------------------------HHHHHH
T ss_pred EEEEeCCCEEEEEEEECCCCeEEEEEEeccccccccccc-----------------------------------hhhhhh
Confidence 57999999999999985 677999999865432211000 011255
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeee-cCCceEEeeccCCCCCCChHHHHhcCCCHHHHHHHHHHHH--H
Q 002039 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--A 279 (977)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~--l 279 (977)
..+.++++ ..-+.+-.++. ....++|||+++|.+|.++.. ....++...+...+.+++ +
T Consensus 50 ~~~~~l~~-----------------~~i~~~~~~~~~~~~~~~v~~~~~~~~L~~~l~-~~~~~~~~~~~~~~~qi~~~L 111 (260)
T PF00069_consen 50 KILRRLRH-----------------PNIVQILDVFQDDNYLYIVMEYCPGGSLQDYLQ-KNKPLSEEEILKIAYQILEAL 111 (260)
T ss_dssp HHHHHHTB-----------------TTBCHEEEEEEESSEEEEEEEEETTEBHHHHHH-HHSSBBHHHHHHHHHHHHHHH
T ss_pred hccccccc-----------------ccccccccccccccccccccccccccccccccc-ccccccccccccccccccccc
Confidence 55555532 11122223332 566789999999988887654 344556666666555554 8
Q ss_pred HHHHhcCccccCCCCCCeEEccCCCCceEEEeccccccc
Q 002039 280 HQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKL 318 (977)
Q Consensus 280 ~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l 318 (977)
..+|..|++|+|+||.||+++.+ ++++|+|||++..+
T Consensus 112 ~~Lh~~~i~H~dikp~NIl~~~~--~~~~l~Dfg~~~~~ 148 (260)
T PF00069_consen 112 AYLHSKGIVHRDIKPENILLDEN--GEVKLIDFGSSVKL 148 (260)
T ss_dssp HHHHHTTEEESSBSGGGEEESTT--SEEEESSGTTTEES
T ss_pred ccccccccccccccccccccccc--cccccccccccccc
Confidence 89999999999999999999955 89999999998753
No 136
>cd06635 STKc_TAO1 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1. Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuron
Probab=99.21 E-value=9.4e-11 Score=131.67 Aligned_cols=160 Identities=18% Similarity=0.164 Sum_probs=104.0
Q ss_pred HHHHHhCCChhhcccccCccccccccccEEEEEEec-CCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCch
Q 002039 105 TIEREFGESMGGMFMDFVETPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNP 183 (977)
Q Consensus 105 ~l~~elg~~~~~~f~~~d~~piasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~ 183 (977)
+...-++.++.+.|... +.||+|++|+||+|+.. +|+.||||+....-.... +
T Consensus 14 ~~~~~~~~~~~~~f~~~--~~lg~G~~~~v~~~~~~~~~~~valK~~~~~~~~~~--~---------------------- 67 (317)
T cd06635 14 IAELFFKEDPEKLFTDL--REIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSN--E---------------------- 67 (317)
T ss_pred HHHHhcCCCchhhhhhh--heeccCCCeEEEEEEEcCCCcEEEEEEEecCCCCch--H----------------------
Confidence 34455677888887754 56999999999999974 789999998753211000 0
Q ss_pred hHHHHhhhcccccCcHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeee-cCCceEEeeccCCCCCCChHHHHh
Q 002039 184 IIDEWCKEAPKELDFNSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLEA 262 (977)
Q Consensus 184 ~~~e~~~~l~~Eld~~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLVmE~i~G~~L~~~~~~~~ 262 (977)
...++.+|++.+.++.+ ...+.+...+. ....+|||||+.| ++.+......
T Consensus 68 ----------~~~~~~~e~~~l~~l~h-----------------~~iv~~~~~~~~~~~~~lv~e~~~g-~l~~~~~~~~ 119 (317)
T cd06635 68 ----------KWQDIIKEVKFLQRIKH-----------------PNSIEYKGCYLREHTAWLVMEYCLG-SASDLLEVHK 119 (317)
T ss_pred ----------HHHHHHHHHHHHHhCCC-----------------CCEEEEEEEEeeCCeEEEEEeCCCC-CHHHHHHHhc
Confidence 00123445554444422 11122222222 4567899999987 5555433333
Q ss_pred cCCCHHHHHHHHHHHH--HHHHHhcCccccCCCCCCeEEccCCCCceEEEecccccccCH
Q 002039 263 FGVNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 320 (977)
Q Consensus 263 ~~~~~~~l~~~l~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 320 (977)
..++...+...+.+++ +..+|..|++|+|++|+||+++.+ +.++|+|||++.....
T Consensus 120 ~~l~~~~~~~i~~~i~~~l~~lH~~~i~H~dL~p~Nil~~~~--~~~kl~dfg~~~~~~~ 177 (317)
T cd06635 120 KPLQEVEIAAITHGALQGLAYLHSHNMIHRDIKAGNILLTEP--GQVKLADFGSASIASP 177 (317)
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCcccEEECCC--CCEEEecCCCccccCC
Confidence 3455555555444443 778899999999999999999865 8899999999876543
No 137
>cd05108 PTKc_EGFR Catalytic domain of the Protein Tyrosine Kinase, Epidermal Growth Factor Receptor. Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EGFR (HER1, ErbB1) is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphor
Probab=99.20 E-value=6.7e-11 Score=132.79 Aligned_cols=80 Identities=21% Similarity=0.172 Sum_probs=61.5
Q ss_pred cCCceEEeeccCCCCCCChHHHHhcCCCHHHHHHHHHHHH--HHHHHhcCccccCCCCCCeEEccCCCCceEEEeccccc
Q 002039 239 SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTK 316 (977)
Q Consensus 239 ~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~ 316 (977)
....+++|||+++++|.+........++...+...+.++. +..+|..|++|+|+||.|||++.+ +.++|+|||++.
T Consensus 80 ~~~~~~v~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~qi~~~L~~LH~~~iiH~dlkp~Nill~~~--~~~kl~DfG~a~ 157 (316)
T cd05108 80 TSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEERRLVHRDLAARNVLVKTP--QHVKITDFGLAK 157 (316)
T ss_pred CCCceeeeecCCCCCHHHHHHhccccCCHHHHHHHHHHHHHHHHHHHhcCeeccccchhheEecCC--CcEEEccccccc
Confidence 4556899999999998876433222345555555555544 788999999999999999999865 789999999998
Q ss_pred ccCH
Q 002039 317 KLSS 320 (977)
Q Consensus 317 ~l~~ 320 (977)
.+..
T Consensus 158 ~~~~ 161 (316)
T cd05108 158 LLGA 161 (316)
T ss_pred cccC
Confidence 7653
No 138
>cd06629 STKc_MAPKKK_Bck1_like Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell inte
Probab=99.20 E-value=1e-10 Score=127.83 Aligned_cols=152 Identities=20% Similarity=0.193 Sum_probs=95.3
Q ss_pred ccccCccccccccccEEEEEEec-CCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhccccc
Q 002039 118 FMDFVETPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKEL 196 (977)
Q Consensus 118 f~~~d~~piasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~El 196 (977)
|.++..++||+|++|+||+|... +|+.||||..+.........+.. ..+..+
T Consensus 1 ~~~~~~~~lg~g~~~~vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~---------------------~~~~~~------ 53 (272)
T cd06629 1 FKWVKGELIGKGTYGRVYLALNVTTGEMMAVKQVELPATIAGRHDSR---------------------QKDMVK------ 53 (272)
T ss_pred CceeecceecccCceEEEEEeecCCCceeeeeeeechhhhhcccchH---------------------HHHHHH------
Confidence 45666789999999999999864 79999999765321111000000 000000
Q ss_pred CcHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceee---e-cCCceEEeeccCCCCCCChHHHHhcCCCHHHHHH
Q 002039 197 DFNSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVI---Q-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVE 272 (977)
Q Consensus 197 d~~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~---~-~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~ 272 (977)
.+..|+..+..+.+ ..+++++ . ....++||||++|.+|.+..... ..++...+..
T Consensus 54 ~~~~e~~~l~~l~h--------------------~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~-~~l~~~~~~~ 112 (272)
T cd06629 54 ALRSEIETLKDLDH--------------------LNIVQYLGFETTEEYLSIFLEYVPGGSIGSCLRTY-GRFEEQLVRF 112 (272)
T ss_pred HHHHHHHHHHhcCC--------------------CCcceEEEEeccCCceEEEEecCCCCcHHHHHhhc-cCCCHHHHHH
Confidence 23344444443321 1122333 2 45678999999999998764321 2334333333
Q ss_pred HHHHHH--HHHHHhcCccccCCCCCCeEEccCCCCceEEEecccccccC
Q 002039 273 EITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 319 (977)
Q Consensus 273 ~l~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~ 319 (977)
.+.+++ +..+|..|++|+|++|+||+++.+ +.++|+|||++....
T Consensus 113 ~~~qi~~~l~~lH~~~i~H~dl~~~nil~~~~--~~~~l~d~~~~~~~~ 159 (272)
T cd06629 113 FTEQVLEGLAYLHSKGILHRDLKADNLLVDAD--GICKISDFGISKKSD 159 (272)
T ss_pred HHHHHHHHHHHHhhCCeeecCCChhhEEEcCC--CeEEEeecccccccc
Confidence 322322 678899999999999999999855 899999999987654
No 139
>cd07848 STKc_CDKL5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase Like 5. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 5 (CDKL5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Mutations in the gene encoding CDKL5, previously called STK9, are associated with early onset epilepsy and severe mental retardation [X-linked infantile spasm syndrome (ISSX) or West syndrome]. In addition, CDKL5 mutations also sometimes
Probab=99.20 E-value=3.8e-11 Score=132.43 Aligned_cols=142 Identities=20% Similarity=0.215 Sum_probs=91.2
Q ss_pred cccccccccEEEEEEec-CCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCcHHHH
Q 002039 124 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (977)
Q Consensus 124 ~piasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea 202 (977)
+.||+|++|.||+|+.+ +++.||||+.+....... . .-.+.+|.
T Consensus 7 ~~lg~g~~~~v~~~~~~~~~~~~avK~~~~~~~~~~-------------------------~----------~~~~~~E~ 51 (287)
T cd07848 7 GVVGEGAYGVVLKCRHKETKEIVAIKKFKDSEENEE-------------------------V----------KETTLREL 51 (287)
T ss_pred EEecccCCEEEEEEEECCCCcEEEEEEEeccccccc-------------------------c----------hhhHHHHH
Confidence 56899999999999985 789999998754311000 0 00122333
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeee-cCCceEEeeccCCCCCCChHHHHhcCCCHHHHHHHHHHHH--H
Q 002039 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--A 279 (977)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~--l 279 (977)
..+.++.+ ..-+.+..++. ....++||||++|..+..+.. ...+++...+...+.+++ +
T Consensus 52 ~~l~~l~h-----------------~~iv~~~~~~~~~~~~~lv~e~~~~~~l~~~~~-~~~~~~~~~~~~~~~qi~~~L 113 (287)
T cd07848 52 KMLRTLKQ-----------------ENIVELKEAFRRRGKLYLVFEYVEKNMLELLEE-MPNGVPPEKVRSYIYQLIKAI 113 (287)
T ss_pred HHHHhCCC-----------------ccccchhhhEecCCEEEEEEecCCCCHHHHHHh-cCCCCCHHHHHHHHHHHHHHH
Confidence 33333321 00111222222 345689999999876654321 123455555555555544 7
Q ss_pred HHHHhcCccccCCCCCCeEEccCCCCceEEEecccccccCH
Q 002039 280 HQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 320 (977)
Q Consensus 280 ~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 320 (977)
..+|..|++|+|+||.||+++.+ +.++|+|||++..+..
T Consensus 114 ~~lH~~~i~H~dlkp~Nill~~~--~~~kl~Dfg~~~~~~~ 152 (287)
T cd07848 114 HWCHKNDIVHRDIKPENLLISHN--DVLKLCDFGFARNLSE 152 (287)
T ss_pred HHHHHCCeecCCCCHHHEEEcCC--CcEEEeeccCcccccc
Confidence 88899999999999999999865 8999999999887643
No 140
>cd05059 PTKc_Tec_like Catalytic domain of Tec-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows
Probab=99.20 E-value=5.4e-11 Score=129.04 Aligned_cols=136 Identities=19% Similarity=0.228 Sum_probs=93.3
Q ss_pred cccccccccEEEEEEecCCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCcHHHHH
Q 002039 124 TPLATASIAQVHRATLVDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEAE 203 (977)
Q Consensus 124 ~piasaSigqV~~A~l~~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea~ 203 (977)
+.||.|++|.||+|+.++++.+|||+..++... +-+|..|..
T Consensus 10 ~~lg~G~~~~v~~~~~~~~~~~~iK~~~~~~~~--------------------------------------~~~~~~e~~ 51 (256)
T cd05059 10 KELGSGQFGVVHLGKWRGKIDVAIKMIREGAMS--------------------------------------EDDFIEEAK 51 (256)
T ss_pred hhhccCCCceEEEeEecCCccEEEEEeccCCCC--------------------------------------HHHHHHHHH
Confidence 569999999999999887889999986543210 002333444
Q ss_pred HHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeee----cCCceEEeeccCCCCCCChHHHHhcCCCHHHHHHHHHHHH-
Q 002039 204 NTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ----SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY- 278 (977)
Q Consensus 204 n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~----~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~- 278 (977)
.+.++.+ + .|.+++. ....++||||++|.+|.+.........+...+...+.++.
T Consensus 52 ~l~~l~~------------------~--~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~ 111 (256)
T cd05059 52 VMMKLSH------------------P--NLVQLYGVCTKQRPIFIVTEYMANGCLLNYLRERKGKLGTEWLLDMCSDVCE 111 (256)
T ss_pred HHHhCCC------------------C--CEEEEEEEEcCCCceEEEEecCCCCCHHHHHHhcccCCCHHHHHHHHHHHHH
Confidence 4433321 1 1333332 4557899999999999876433222344555444444433
Q ss_pred -HHHHHhcCccccCCCCCCeEEccCCCCceEEEecccccccC
Q 002039 279 -AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 319 (977)
Q Consensus 279 -l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~ 319 (977)
+..+|..|++|+|+||.||+++.+ +.++|+|||++..+.
T Consensus 112 ~l~~lH~~~i~H~dl~p~ni~i~~~--~~~kl~dfg~~~~~~ 151 (256)
T cd05059 112 AMEYLESNGFIHRDLAARNCLVGED--NVVKVSDFGLARYVL 151 (256)
T ss_pred HHHHHHHCCcccccccHhhEEECCC--CcEEECCcccceecc
Confidence 678899999999999999999865 889999999987653
No 141
>cd05064 PTKc_EphR_A10 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A10. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA10 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchor
Probab=99.20 E-value=6.7e-11 Score=129.19 Aligned_cols=140 Identities=14% Similarity=0.102 Sum_probs=93.2
Q ss_pred cccccccccEEEEEEec----CCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCcH
Q 002039 124 TPLATASIAQVHRATLV----DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFN 199 (977)
Q Consensus 124 ~piasaSigqV~~A~l~----~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~ 199 (977)
+.||+|++|+||+|+++ .+..||+|+.+.+...... .+|.
T Consensus 11 ~~ig~G~fg~V~~~~~~~~~~~~~~vaik~~~~~~~~~~~------------------------------------~~~~ 54 (266)
T cd05064 11 RILGTGRFGELCRGCLKLPSKRELPVAIHTLRAGCSDKQR------------------------------------RGFL 54 (266)
T ss_pred eeecccCCCeEEEEEEecCCCceeeEEEEecCCCCCHHHH------------------------------------HHHH
Confidence 56999999999999863 4678999987654221100 1233
Q ss_pred HHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeee-cCCceEEeeccCCCCCCChHHHHhcCCCHHHHHHHHHHHH
Q 002039 200 SEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY 278 (977)
Q Consensus 200 ~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~ 278 (977)
+|...+.++.+ ..-+.+-..+. ....+|||||++|.+|.++.......+....+...+.+++
T Consensus 55 ~e~~~l~~l~h-----------------~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~l~~~~~~~~~~~i~ 117 (266)
T cd05064 55 AEALTLGQFDH-----------------SNIVRLEGVITRGNTMMIVTEYMSNGALDSFLRKHEGQLVAGQLMGMLPGLA 117 (266)
T ss_pred HHHHHHhcCCC-----------------CCcCeEEEEEecCCCcEEEEEeCCCCcHHHHHHhCCCCCCHHHHHHHHHHHH
Confidence 45444443321 11122222222 4567899999999999877543222345555555554444
Q ss_pred --HHHHHhcCccccCCCCCCeEEccCCCCceEEEeccccccc
Q 002039 279 --AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKL 318 (977)
Q Consensus 279 --l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l 318 (977)
+..+|..|++|+|+||.||+++.+ +.+++.|||.....
T Consensus 118 ~al~~lH~~~iiH~dikp~nili~~~--~~~~l~dfg~~~~~ 157 (266)
T cd05064 118 SGMKYLSEMGYVHKGLAAHKVLVNSD--LVCKISGFRRLQED 157 (266)
T ss_pred HHHHHHHHCCEeeccccHhhEEEcCC--CcEEECCCcccccc
Confidence 778999999999999999999865 88999999976554
No 142
>cd06644 STKc_STK10_LOK Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase. Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types.
Probab=99.20 E-value=8.5e-11 Score=130.19 Aligned_cols=146 Identities=16% Similarity=0.159 Sum_probs=96.1
Q ss_pred hhcccccCccccccccccEEEEEEec-CCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcc
Q 002039 115 GGMFMDFVETPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAP 193 (977)
Q Consensus 115 ~~~f~~~d~~piasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~ 193 (977)
.+.|+.. +.||.|++|.||+|+.. +|+.|++|+.........
T Consensus 11 ~~~y~i~--~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~~~~~~----------------------------------- 53 (292)
T cd06644 11 NEVWEII--GELGDGAFGKVYKAKNKETGALAAAKVIETKSEEEL----------------------------------- 53 (292)
T ss_pred chhhhhh--heecCCCCeEEEEEEECCCCceEEEEEeccCCHHHH-----------------------------------
Confidence 3444433 45999999999999975 689999998754322110
Q ss_pred cccCcHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeee-cCCceEEeeccCCCCCCChHHHHhcCCCHHHHHH
Q 002039 194 KELDFNSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVE 272 (977)
Q Consensus 194 ~Eld~~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~ 272 (977)
-++.+|...+..+.+ ..-+.+-..+. ....++||||++|.++..........++...+..
T Consensus 54 --~~~~~e~~~l~~l~h-----------------~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~l~~~~~~~ 114 (292)
T cd06644 54 --EDYMVEIEILATCNH-----------------PYIVKLLGAFYWDGKLWIMIEFCPGGAVDAIMLELDRGLTEPQIQV 114 (292)
T ss_pred --HHHHHHHHHHHhCCC-----------------CcEeeeEEEEEeCCeEEEEEecCCCCcHHHHHHhhcCCCCHHHHHH
Confidence 023344444444322 01122222222 5667999999999988665322233455555555
Q ss_pred HHHHHH--HHHHHhcCccccCCCCCCeEEccCCCCceEEEeccccccc
Q 002039 273 EITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKL 318 (977)
Q Consensus 273 ~l~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l 318 (977)
.+.++. +..+|..|++|+|+||.||+++.+ ++++|+|||++...
T Consensus 115 ~~~ql~~~l~~lH~~~i~H~dlkp~Nili~~~--~~~kl~dfg~~~~~ 160 (292)
T cd06644 115 ICRQMLEALQYLHSMKIIHRDLKAGNVLLTLD--GDIKLADFGVSAKN 160 (292)
T ss_pred HHHHHHHHHHHHhcCCeeecCCCcceEEEcCC--CCEEEccCccceec
Confidence 444443 678899999999999999999855 89999999987654
No 143
>KOG0201 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.20 E-value=7.3e-12 Score=137.99 Aligned_cols=154 Identities=16% Similarity=0.247 Sum_probs=101.2
Q ss_pred ChhhcccccCccccccccccEEEEEEe-cCCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhh
Q 002039 113 SMGGMFMDFVETPLATASIAQVHRATL-VDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKE 191 (977)
Q Consensus 113 ~~~~~f~~~d~~piasaSigqV~~A~l-~~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~ 191 (977)
++...|..+ +-||.||||.||+|.. ++++.||+||..-+..+....|+
T Consensus 10 ~~~~~~~~~--~~IgrGsfG~Vyk~~d~~t~k~vAiKii~Le~~~deIedi----------------------------- 58 (467)
T KOG0201|consen 10 DPELLYTKL--ELIGRGSFGEVYKAIDNKTKKVVAIKIIDLEEAEDEIEDI----------------------------- 58 (467)
T ss_pred Ccccccccc--hhccccccceeeeeeeccccceEEEEEechhhcchhhHHH-----------------------------
Confidence 455667766 4699999999999997 58999999997532211111111
Q ss_pred cccccCcHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeeecCCceEEeeccCCCCCCChHHHHhcCC-CHHHH
Q 002039 192 APKELDFNSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQSSETVLILEFMDGIRLNDCESLEAFGV-NKQKV 270 (977)
Q Consensus 192 l~~Eld~~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~~~~~vLVmE~i~G~~L~~~~~~~~~~~-~~~~l 270 (977)
.+|+.+..+.+. ..+-+++. ..+..+.-+++|||+.|+++.+... ..++ +...+
T Consensus 59 -qqei~~Ls~~~~-~~it~yyg---------------------syl~g~~LwiiMey~~gGsv~~lL~--~~~~~~E~~i 113 (467)
T KOG0201|consen 59 -QQEISVLSQCDS-PNITEYYG---------------------SYLKGTKLWIIMEYCGGGSVLDLLK--SGNILDEFEI 113 (467)
T ss_pred -HHHHHHHHhcCc-chHHhhhh---------------------heeecccHHHHHHHhcCcchhhhhc--cCCCCcccee
Confidence 111211111111 11111111 0112566789999999999998744 3333 44444
Q ss_pred HHHHHHHH--HHHHHhcCccccCCCCCCeEEccCCCCceEEEecccccccCHHHHH
Q 002039 271 VEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSSSMKQ 324 (977)
Q Consensus 271 ~~~l~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~~~r~ 324 (977)
+..+.+.. +..+|.++.+|+|+|+.||++..+ |.++|.|||.+.+++.....
T Consensus 114 ~~ilre~l~~l~ylH~~~kiHrDIKaanil~s~~--g~vkl~DfgVa~ql~~~~~r 167 (467)
T KOG0201|consen 114 AVILREVLKGLDYLHSEKKIHRDIKAANILLSES--GDVKLADFGVAGQLTNTVKR 167 (467)
T ss_pred eeehHHHHHHhhhhhhcceecccccccceeEecc--CcEEEEecceeeeeechhhc
Confidence 44444433 888999999999999999999976 89999999999999876544
No 144
>KOG1989 consensus ARK protein kinase family [Signal transduction mechanisms]
Probab=99.20 E-value=4.6e-11 Score=142.34 Aligned_cols=124 Identities=14% Similarity=0.132 Sum_probs=83.2
Q ss_pred eEEeeccCCCCCCChHHH-HhcCCCHHHHHHHHHHHH--HHHHHhcC--ccccCCCCCCeEEccCCCCceEEEecccccc
Q 002039 243 VLILEFMDGIRLNDCESL-EAFGVNKQKVVEEITRAY--AHQIYVDG--FFNGDPHPGNFLVSKDPPHRPILLDFGLTKK 317 (977)
Q Consensus 243 vLVmE~i~G~~L~~~~~~-~~~~~~~~~l~~~l~~~~--l~~i~~~G--~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~ 317 (977)
.|.||||.|..|-|+..- ...++...++++++.+.+ +..+|... ++|||||-+|||+..+ |..+|||||.+..
T Consensus 118 llLmEyC~gg~Lvd~mn~Rlq~~lte~eVLkIf~dv~~AVa~mH~~~pPiIHRDLKiENvLls~~--g~~KLCDFGSatt 195 (738)
T KOG1989|consen 118 LLLMEYCKGGSLVDFMNTRLQTRLTEDEVLKIFYDVCEAVAAMHYLKPPIIHRDLKIENVLLSAD--GNYKLCDFGSATT 195 (738)
T ss_pred EeehhhccCCcHHHHHHHHHhccCChHHHHHHHHHHHHHHHHHhcCCCccchhhhhhhheEEcCC--CCEEeCccccccc
Confidence 589999999888887542 233477788888877766 67788877 9999999999999965 8999999999875
Q ss_pred cCH-----HHHHHHHHHHHHH--HcCCHHHHHHHHHHcCcccCCCcHHHHHHHHHHHH
Q 002039 318 LSS-----SMKQALAKMFFAA--AEGDHVALLSAFAEMGLRLRLDVPEQAMEVSTLFF 368 (977)
Q Consensus 318 l~~-----~~r~~~~~l~~a~--~~~d~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~ 368 (977)
... ..+..+-.=+..- ......+|++.+..+++..+.|+=+.-.-+..++|
T Consensus 196 ~~~~~~~~~e~~~ve~eI~k~TTp~YRsPEMIDlysg~pI~eKsDIWALGclLYkLCy 253 (738)
T KOG1989|consen 196 KILSPTSAQEVNYVEEEIEKYTTPQYRSPEMIDLYSGLPIGEKSDIWALGCLLYKLCY 253 (738)
T ss_pred ccCCCccHHHHHHHHHHHHhhCCccccChHHHhhhcCCCCcchhHHHHHHHHHHHHHH
Confidence 422 2222222222221 22344668898888887654444443333444444
No 145
>cd07874 STKc_JNK3 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 3. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 3 (JNK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK3 is expressed primarily in the brain, and to a lesser extent in the heart and testis. Mice deficient in Jnk3 are protected against kainic acid-induced seizures, strok
Probab=99.20 E-value=8.5e-11 Score=134.24 Aligned_cols=73 Identities=22% Similarity=0.444 Sum_probs=53.4
Q ss_pred CceEEeeccCCCCCCChHHHHhcCCCHHHHHHHHHHHH--HHHHHhcCccccCCCCCCeEEccCCCCceEEEeccccccc
Q 002039 241 ETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKL 318 (977)
Q Consensus 241 ~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l 318 (977)
..++||||++|. +.+. + ...++...+...+.+++ +..+|..|++|||+||+||+++.+ +.++|+|||+++..
T Consensus 96 ~~~lv~e~~~~~-l~~~--~-~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDikp~Nill~~~--~~~kl~Dfg~~~~~ 169 (355)
T cd07874 96 DVYLVMELMDAN-LCQV--I-QMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSD--CTLKILDFGLARTA 169 (355)
T ss_pred eeEEEhhhhccc-HHHH--H-hhcCCHHHHHHHHHHHHHHHHHHHhCCcccCCCChHHEEECCC--CCEEEeeCcccccC
Confidence 358999999874 3222 1 12345455444444443 788999999999999999999865 89999999998765
Q ss_pred C
Q 002039 319 S 319 (977)
Q Consensus 319 ~ 319 (977)
.
T Consensus 170 ~ 170 (355)
T cd07874 170 G 170 (355)
T ss_pred C
Confidence 4
No 146
>cd05079 PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1. Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers a
Probab=99.19 E-value=8.8e-11 Score=129.52 Aligned_cols=141 Identities=21% Similarity=0.230 Sum_probs=93.8
Q ss_pred cccccccccEEEEEEe-----cCCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCc
Q 002039 124 TPLATASIAQVHRATL-----VDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDF 198 (977)
Q Consensus 124 ~piasaSigqV~~A~l-----~~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~ 198 (977)
+.||.|++|.||+|+. .+++.||||..++........ ++
T Consensus 10 ~~lg~g~~g~v~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~------------------------------------~~ 53 (284)
T cd05079 10 RDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIA------------------------------------DL 53 (284)
T ss_pred eecCCCCceeEEEEEEccCCCCccceEEEEEcCccccHHHHH------------------------------------HH
Confidence 4599999999999984 368899999877543211100 23
Q ss_pred HHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeee-c--CCceEEeeccCCCCCCChHHHHhcCCCHHHHHHHHH
Q 002039 199 NSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-S--SETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEIT 275 (977)
Q Consensus 199 ~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~--~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~ 275 (977)
.+|...+.++.+ ..-+.+..... . ...++||||++|.+|.++........+...+...+.
T Consensus 54 ~~e~~~l~~l~h-----------------~~i~~~~~~~~~~~~~~~~lv~e~~~g~~L~~~l~~~~~~~~~~~~~~i~~ 116 (284)
T cd05079 54 KKEIEILRNLYH-----------------ENIVKYKGICTEDGGNGIKLIMEFLPSGSLKEYLPRNKNKINLKQQLKYAV 116 (284)
T ss_pred HHHHHHHHhCCC-----------------CCeeeeeeEEecCCCCceEEEEEccCCCCHHHHHHhccCCCCHHHHHHHHH
Confidence 345444444321 11122222222 1 335799999999999877432222345555555444
Q ss_pred HHH--HHHHHhcCccccCCCCCCeEEccCCCCceEEEecccccccC
Q 002039 276 RAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 319 (977)
Q Consensus 276 ~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~ 319 (977)
++. +..+|..|++|+|+||.||+++.+ +.++|+|||++..+.
T Consensus 117 ~i~~aL~~lH~~gi~H~dlkp~Nil~~~~--~~~~l~dfg~~~~~~ 160 (284)
T cd05079 117 QICKGMDYLGSRQYVHRDLAARNVLVESE--HQVKIGDFGLTKAIE 160 (284)
T ss_pred HHHHHHHHHHHCCeeecccchheEEEcCC--CCEEECCCccccccc
Confidence 443 788999999999999999999865 889999999988764
No 147
>cd05033 PTKc_EphR Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment
Probab=99.19 E-value=1.1e-10 Score=127.40 Aligned_cols=142 Identities=20% Similarity=0.223 Sum_probs=96.1
Q ss_pred ccccccccccEEEEEEec----CCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCc
Q 002039 123 ETPLATASIAQVHRATLV----DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDF 198 (977)
Q Consensus 123 ~~piasaSigqV~~A~l~----~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~ 198 (977)
.+.||.|++|.||+|+.+ +...||||+.++....... .+|
T Consensus 9 ~~~lg~g~~g~vy~~~~~~~~~~~~~vaik~~~~~~~~~~~------------------------------------~~~ 52 (266)
T cd05033 9 EKVIGGGEFGEVCRGRLKLPGKKEIDVAIKTLKAGSSDKQR------------------------------------LDF 52 (266)
T ss_pred eeEecCCccceEEEEEEccCCCCcceEEEEEcCCCCChHHH------------------------------------HHH
Confidence 367999999999999974 2457999987654322111 123
Q ss_pred HHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeee-cCCceEEeeccCCCCCCChHHHHhcCCCHHHHHHHHHHH
Q 002039 199 NSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRA 277 (977)
Q Consensus 199 ~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~ 277 (977)
..|...+.++.+ ..-+.+...+. ....++||||++|.+|.++.......++...+...+.++
T Consensus 53 ~~e~~~l~~l~h-----------------~~i~~~~~~~~~~~~~~iv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l 115 (266)
T cd05033 53 LTEASIMGQFDH-----------------PNIIRLEGVVTKSRPVMIITEYMENGSLDKFLRENDGKFTVGQLVGMLRGI 115 (266)
T ss_pred HHHHHHHHhCCC-----------------CCcceEeEEEecCCceEEEEEcCCCCCHHHHHHhccCCCCHHHHHHHHHHH
Confidence 345444444321 01112222222 455689999999999987754322345555655555554
Q ss_pred H--HHHHHhcCccccCCCCCCeEEccCCCCceEEEecccccccC
Q 002039 278 Y--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 319 (977)
Q Consensus 278 ~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~ 319 (977)
+ +..+|..|++|+|+||.||+++.+ +.++|+|||++..+.
T Consensus 116 ~~~l~~Lh~~~i~H~di~p~nili~~~--~~~~l~dfg~~~~~~ 157 (266)
T cd05033 116 ASGMKYLSEMNYVHRDLAARNILVNSN--LVCKVSDFGLSRRLE 157 (266)
T ss_pred HHHHHHHHhCCcccCCCCcceEEEcCC--CCEEECccchhhccc
Confidence 4 778999999999999999999865 889999999998774
No 148
>cd05112 PTKc_Itk Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase. Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activ
Probab=99.19 E-value=6.8e-11 Score=127.98 Aligned_cols=136 Identities=19% Similarity=0.235 Sum_probs=93.6
Q ss_pred cccccccccEEEEEEecCCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCcHHHHH
Q 002039 124 TPLATASIAQVHRATLVDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEAE 203 (977)
Q Consensus 124 ~piasaSigqV~~A~l~~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea~ 203 (977)
+.||.|++|+||+|...+++.+|||+.+.+... +-+|..|.+
T Consensus 10 ~~ig~g~~g~v~~~~~~~~~~~~~k~~~~~~~~--------------------------------------~~~~~~e~~ 51 (256)
T cd05112 10 QEIGSGQFGLVWLGYWLEKRKVAIKTIREGAMS--------------------------------------EEDFIEEAQ 51 (256)
T ss_pred eeecCcccceEEEEEEeCCCeEEEEECCCCCCC--------------------------------------HHHHHHHHH
Confidence 579999999999999877889999987543210 112344555
Q ss_pred HHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceee---e-cCCceEEeeccCCCCCCChHHHHhcCCCHHHHHHHHHHHH-
Q 002039 204 NTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVI---Q-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY- 278 (977)
Q Consensus 204 n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~---~-~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~- 278 (977)
.+.++.+ ..+.+++ . ....++||||++|.+|.+.............+...+.+++
T Consensus 52 ~l~~l~~--------------------~~i~~~~~~~~~~~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~ 111 (256)
T cd05112 52 VMMKLSH--------------------PKLVQLYGVCTERSPICLVFEFMEHGCLSDYLRAQRGKFSQETLLGMCLDVCE 111 (256)
T ss_pred HHHhCCC--------------------CCeeeEEEEEccCCceEEEEEcCCCCcHHHHHHhCccCCCHHHHHHHHHHHHH
Confidence 5544421 1122222 2 4567899999999998876432222244444444444433
Q ss_pred -HHHHHhcCccccCCCCCCeEEccCCCCceEEEecccccccC
Q 002039 279 -AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 319 (977)
Q Consensus 279 -l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~ 319 (977)
+..+|..|++|+|+||.||+++.+ +.++|+|||++..+.
T Consensus 112 ~l~~lH~~~i~h~dl~p~ni~i~~~--~~~~l~d~g~~~~~~ 151 (256)
T cd05112 112 GMAYLESSNVIHRDLAARNCLVGEN--QVVKVSDFGMTRFVL 151 (256)
T ss_pred HHHHHHHCCccccccccceEEEcCC--CeEEECCCcceeecc
Confidence 678899999999999999999854 789999999987653
No 149
>cd00192 PTKc Catalytic domain of Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligan
Probab=99.19 E-value=9.4e-11 Score=126.60 Aligned_cols=140 Identities=19% Similarity=0.232 Sum_probs=97.6
Q ss_pred cccccccccEEEEEEecC----CCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCcH
Q 002039 124 TPLATASIAQVHRATLVD----GRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFN 199 (977)
Q Consensus 124 ~piasaSigqV~~A~l~~----G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~ 199 (977)
+.||.|++|.||+|+... +..|+||+.++...... . -++.
T Consensus 1 ~~ig~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~~~~~---~---------------------------------~~~~ 44 (262)
T cd00192 1 KKLGEGAFGEVYKGKLKGKDGKTTEVAVKTLKEDASEEE---R---------------------------------KDFL 44 (262)
T ss_pred CccccCCceEEEEEEEecCCCCCceEEeEeeccccchhH---H---------------------------------HHHH
Confidence 368999999999999753 88999999876533210 0 0233
Q ss_pred HHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceee---e-cCCceEEeeccCCCCCCChHHHH--------hcCCCH
Q 002039 200 SEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVI---Q-SSETVLILEFMDGIRLNDCESLE--------AFGVNK 267 (977)
Q Consensus 200 ~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~---~-~~~~vLVmE~i~G~~L~~~~~~~--------~~~~~~ 267 (977)
+|.+.+.++.+ ..+.+++ . ....+++|||++|.+|.+..... ....+.
T Consensus 45 ~e~~~l~~~~~--------------------~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~ 104 (262)
T cd00192 45 KEARVMKKLGH--------------------PNVVRLLGVCTEEEPLYLVLEYMEGGDLLDYLRKSRPVFPSPEKSTLSL 104 (262)
T ss_pred HHHHHHhhcCC--------------------CChheeeeeecCCCceEEEEEeccCCcHHHHHhhccccccccccccCCH
Confidence 44444444421 1122222 1 45568999999999998875432 234556
Q ss_pred HHHHHHHHHHH--HHHHHhcCccccCCCCCCeEEccCCCCceEEEecccccccCHH
Q 002039 268 QKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSSS 321 (977)
Q Consensus 268 ~~l~~~l~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~~ 321 (977)
..+...+.+++ +..+|..|++|+|++|.||+++.+ +.++|+|||.+..+...
T Consensus 105 ~~~~~~~~~l~~al~~lH~~~i~H~di~p~nili~~~--~~~~l~dfg~~~~~~~~ 158 (262)
T cd00192 105 KDLLSFAIQIAKGMEYLASKKFVHRDLAARNCLVGED--LVVKISDFGLSRDVYDD 158 (262)
T ss_pred HHHHHHHHHHHHHHHHHHcCCcccCccCcceEEECCC--CcEEEcccccccccccc
Confidence 66666555544 788999999999999999999965 89999999999877643
No 150
>cd05040 PTKc_Ack_like Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase. Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with and
Probab=99.19 E-value=7e-11 Score=127.91 Aligned_cols=142 Identities=21% Similarity=0.207 Sum_probs=93.1
Q ss_pred cccccccccEEEEEEec--CC--CEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCcH
Q 002039 124 TPLATASIAQVHRATLV--DG--RQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFN 199 (977)
Q Consensus 124 ~piasaSigqV~~A~l~--~G--~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~ 199 (977)
+.||+|++|.||+|... ++ ..||||+.+++...... + ++.
T Consensus 1 ~~ig~g~~~~v~~~~~~~~~~~~~~vaiK~~~~~~~~~~~--------------------------~----------~~~ 44 (257)
T cd05040 1 KKLGDGSFGVVRRGEWSTSGGKVIPVAVKCLKSDKLSDIM--------------------------D----------DFL 44 (257)
T ss_pred CcCCccCcccEEeeeEecCCCCceEEEEeecCCcccHHHH--------------------------H----------HHH
Confidence 35899999999999874 23 36999988765432000 0 233
Q ss_pred HHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeeecCCceEEeeccCCCCCCChHHHHh-cCCCHHHHHHHHHHHH
Q 002039 200 SEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQSSETVLILEFMDGIRLNDCESLEA-FGVNKQKVVEEITRAY 278 (977)
Q Consensus 200 ~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~~~~~vLVmE~i~G~~L~~~~~~~~-~~~~~~~l~~~l~~~~ 278 (977)
+|.+.+.++++ ..-+.+...+.....++||||++|.+|.+...... ...+...+...+.++.
T Consensus 45 ~e~~~l~~l~h-----------------~~iv~~~~~~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~qi~ 107 (257)
T cd05040 45 KEAAIMHSLDH-----------------ENLIRLYGVVLTHPLMMVTELAPLGSLLDRLRKDALGHFLISTLCDYAVQIA 107 (257)
T ss_pred HHHHHHhhcCC-----------------CCccceeEEEcCCeEEEEEEecCCCcHHHHHHhcccccCcHHHHHHHHHHHH
Confidence 44444444422 01122222222355689999999999987643222 2244455554444443
Q ss_pred --HHHHHhcCccccCCCCCCeEEccCCCCceEEEecccccccCH
Q 002039 279 --AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 320 (977)
Q Consensus 279 --l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 320 (977)
+..+|..|++|+|+||.||+++.+ +.++|+|||++..+..
T Consensus 108 ~~L~~lH~~~i~H~di~p~nil~~~~--~~~kl~dfg~~~~~~~ 149 (257)
T cd05040 108 NGMRYLESKRFIHRDLAARNILLASD--DKVKIGDFGLMRALPQ 149 (257)
T ss_pred HHHHHHHhCCccccccCcccEEEecC--CEEEeccccccccccc
Confidence 778899999999999999999966 8999999999887754
No 151
>cd06650 PKc_MEK1 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1. Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downst
Probab=99.19 E-value=1.1e-10 Score=132.16 Aligned_cols=140 Identities=20% Similarity=0.174 Sum_probs=92.6
Q ss_pred cccccccccEEEEEEec-CCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCcHHHH
Q 002039 124 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (977)
Q Consensus 124 ~piasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea 202 (977)
+.||.|++|.||+|+.+ +|+.||+|+.+........ -.+.+|+
T Consensus 11 ~~lg~g~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~------------------------------------~~~~~E~ 54 (333)
T cd06650 11 SELGAGNGGVVFKVSHKPSGLIMARKLIHLEIKPAIR------------------------------------NQIIREL 54 (333)
T ss_pred ccccCCCCEEEEEEEECCCCcEEEEEEeecccCHHHH------------------------------------HHHHHHH
Confidence 56999999999999985 7899999987654321110 0234455
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeee-cCCceEEeeccCCCCCCChHHHHhcCCCHHHHHHHHHHHH--H
Q 002039 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--A 279 (977)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~--l 279 (977)
+.+..+.+ ..-+.+-..+. ....+|||||++|.+|.++... ....+...+.....+++ +
T Consensus 55 ~~l~~l~h-----------------~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~-~~~~~~~~~~~~~~~l~~~l 116 (333)
T cd06650 55 QVLHECNS-----------------PYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKK-AGRIPEQILGKVSIAVIKGL 116 (333)
T ss_pred HHHHHCCC-----------------CcccceeEEEEECCEEEEEEecCCCCcHHHHHHH-cCCCCHHHHHHHHHHHHHHH
Confidence 55554432 01122222332 4567899999999999887432 12234444333333332 5
Q ss_pred HHHHh-cCccccCCCCCCeEEccCCCCceEEEecccccccC
Q 002039 280 HQIYV-DGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 319 (977)
Q Consensus 280 ~~i~~-~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~ 319 (977)
..+|. .+++|+|+||+|||++.+ +.++|+|||++..+.
T Consensus 117 ~~lH~~~~ivH~dlkp~Nili~~~--~~~kL~Dfg~~~~~~ 155 (333)
T cd06650 117 TYLREKHKIMHRDVKPSNILVNSR--GEIKLCDFGVSGQLI 155 (333)
T ss_pred HHHHhcCCEEecCCChhhEEEcCC--CCEEEeeCCcchhhh
Confidence 67785 589999999999999865 889999999986653
No 152
>cd05619 STKc_nPKC_theta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in
Probab=99.19 E-value=9.8e-11 Score=131.64 Aligned_cols=76 Identities=16% Similarity=0.229 Sum_probs=57.3
Q ss_pred cCCceEEeeccCCCCCCChHHHHhcCCCHHHHHHHHHHHH--HHHHHhcCccccCCCCCCeEEccCCCCceEEEeccccc
Q 002039 239 SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTK 316 (977)
Q Consensus 239 ~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~ 316 (977)
....+|||||++|.+|.+... .....+...+...+.+++ +..+|..|++|+|+||.|||++.+ +.++|+|||++.
T Consensus 68 ~~~~~lv~ey~~~g~L~~~l~-~~~~~~~~~~~~~~~qi~~al~~LH~~~ivHrdikp~Nil~~~~--~~~kl~Dfg~~~ 144 (316)
T cd05619 68 KENLFFVMEYLNGGDLMFHIQ-SCHKFDLPRATFYAAEIICGLQFLHSKGIVYRDLKLDNILLDTD--GHIKIADFGMCK 144 (316)
T ss_pred CCEEEEEEeCCCCCcHHHHHH-HcCCCCHHHHHHHHHHHHHHHHHHHhCCeEeCCCCHHHEEECCC--CCEEEccCCcce
Confidence 345679999999999876532 122344444444444433 788999999999999999999865 889999999986
Q ss_pred c
Q 002039 317 K 317 (977)
Q Consensus 317 ~ 317 (977)
.
T Consensus 145 ~ 145 (316)
T cd05619 145 E 145 (316)
T ss_pred E
Confidence 5
No 153
>cd05113 PTKc_Btk_Bmx Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome. Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds
Probab=99.19 E-value=7.1e-11 Score=128.26 Aligned_cols=136 Identities=18% Similarity=0.181 Sum_probs=94.0
Q ss_pred cccccccccEEEEEEecCCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCcHHHHH
Q 002039 124 TPLATASIAQVHRATLVDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEAE 203 (977)
Q Consensus 124 ~piasaSigqV~~A~l~~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea~ 203 (977)
+.||+|++|.||.|+.+++..||||..+.+... +-+|.+|..
T Consensus 10 ~~lg~G~~~~vy~~~~~~~~~~aik~~~~~~~~--------------------------------------~~~~~~e~~ 51 (256)
T cd05113 10 KELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMS--------------------------------------EDEFIEEAK 51 (256)
T ss_pred eEecCcccceEEEEEecCCCcEEEEEcCCCccc--------------------------------------HHHHHHHHH
Confidence 469999999999999877778999976543110 002344555
Q ss_pred HHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeee----cCCceEEeeccCCCCCCChHHHHhcCCCHHHHHHHHHHHH-
Q 002039 204 NTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ----SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY- 278 (977)
Q Consensus 204 n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~----~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~- 278 (977)
.+.++.+ ..|++++. ....++||||++|.+|.+........++...+...+.++.
T Consensus 52 ~l~~l~h--------------------~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~i~~~~~~~~~~~~~~~~~~i~~ 111 (256)
T cd05113 52 VMMKLSH--------------------EKLVQLYGVCTKQRPIYIVTEYMSNGCLLNYLREHGKRFQPSQLLEMCKDVCE 111 (256)
T ss_pred HHhcCCC--------------------CCeeeEEEEEccCCCcEEEEEcCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHH
Confidence 4444321 12333332 3446899999999988876432222455555555555544
Q ss_pred -HHHHHhcCccccCCCCCCeEEccCCCCceEEEecccccccC
Q 002039 279 -AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 319 (977)
Q Consensus 279 -l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~ 319 (977)
+..+|..|++|+|+||+||+++.+ ++++|+|||++..+.
T Consensus 112 ~l~~lH~~~i~H~dl~p~nili~~~--~~~kl~d~g~~~~~~ 151 (256)
T cd05113 112 GMAYLESKQFIHRDLAARNCLVDDQ--GCVKVSDFGLSRYVL 151 (256)
T ss_pred HHHHHHhCCeeccccCcceEEEcCC--CCEEECCCccceecC
Confidence 678899999999999999999855 899999999987653
No 154
>cd07876 STKc_JNK2 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 2 (JNK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn
Probab=99.18 E-value=1.1e-10 Score=133.45 Aligned_cols=137 Identities=18% Similarity=0.242 Sum_probs=86.7
Q ss_pred cccccccccEEEEEEec-CCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCcHHHH
Q 002039 124 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (977)
Q Consensus 124 ~piasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea 202 (977)
+.||+|++|.||+|+.+ +|+.||||+.......... ...+.+|.
T Consensus 27 ~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~-----------------------------------~~~~~~E~ 71 (359)
T cd07876 27 KPIGSGAQGIVCAAFDTVLGINVAVKKLSRPFQNQTH-----------------------------------AKRAYREL 71 (359)
T ss_pred EEeecCCCEEEEEEEEcCCCceeEEEEecccccchhH-----------------------------------HHHHHHHH
Confidence 68999999999999974 7999999987533211000 00122333
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeee-------cCCceEEeeccCCCCCCChHHHHhcCCCHHHHHHHHH
Q 002039 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-------SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEIT 275 (977)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-------~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~ 275 (977)
..+..+.+ ...+.+..++. ....++||||++|... +. + ...++...+...+.
T Consensus 72 ~~l~~l~h-----------------~niv~~~~~~~~~~~~~~~~~~~lv~e~~~~~l~-~~--~-~~~~~~~~~~~~~~ 130 (359)
T cd07876 72 VLLKCVNH-----------------KNIISLLNVFTPQKSLEEFQDVYLVMELMDANLC-QV--I-HMELDHERMSYLLY 130 (359)
T ss_pred HHHHhCCC-----------------CCEeeeeeeeccCCCccccceeEEEEeCCCcCHH-HH--H-hccCCHHHHHHHHH
Confidence 33333321 11122222221 1235899999987422 21 1 22345555544444
Q ss_pred HHH--HHHHHhcCccccCCCCCCeEEccCCCCceEEEeccccccc
Q 002039 276 RAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKL 318 (977)
Q Consensus 276 ~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l 318 (977)
+++ +..+|..|++|||+||.|||++.+ +.++|+|||++...
T Consensus 131 qi~~~L~~LH~~~ivHrDlkp~NIl~~~~--~~~kl~Dfg~a~~~ 173 (359)
T cd07876 131 QMLCGIKHLHSAGIIHRDLKPSNIVVKSD--CTLKILDFGLARTA 173 (359)
T ss_pred HHHHHHHHHHhCCcccCCCCHHHEEECCC--CCEEEecCCCcccc
Confidence 444 788999999999999999999865 89999999998654
No 155
>cd05122 PKc_STE Catalytic domain of STE family Protein Kinases. Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core
Probab=99.18 E-value=9.5e-11 Score=125.59 Aligned_cols=139 Identities=19% Similarity=0.253 Sum_probs=98.1
Q ss_pred cccccccccEEEEEEec-CCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCcHHHH
Q 002039 124 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (977)
Q Consensus 124 ~piasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea 202 (977)
++||+|++|.||+++.+ +|+.|++|+.+....+.. -++.+|.
T Consensus 6 ~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~-------------------------------------~~~~~e~ 48 (253)
T cd05122 6 EKIGKGGFGEVYKARHKRTGKEVAIKVIKLESKEKK-------------------------------------EKIINEI 48 (253)
T ss_pred eeeccCCceEEEEEEECCCCcEEEEEEecccchhHH-------------------------------------HHHHHHH
Confidence 67999999999999985 799999999876433100 0123344
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceee---e-cCCceEEeeccCCCCCCChHHHHhcCCCHHHHHHHHHHHH
Q 002039 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVI---Q-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY 278 (977)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~---~-~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~ 278 (977)
..+.++.+ -.++.++ . ....+++|||++|.+|.++.......++...+...+.+++
T Consensus 49 ~~l~~l~~--------------------~~i~~~~~~~~~~~~~~l~~e~~~~~~L~~~~~~~~~~~~~~~~~~i~~~i~ 108 (253)
T cd05122 49 QILKKCKH--------------------PNIVKYYGSYLKKDELWIVMEFCSGGSLKDLLKSTNQTLTESQIAYVCKELL 108 (253)
T ss_pred HHHHhCCC--------------------CCEeEEEEEEecCCeEEEEEecCCCCcHHHHHhhcCCCCCHHHHHHHHHHHH
Confidence 43333321 1222222 2 4567899999999999877443223456666665555544
Q ss_pred --HHHHHhcCccccCCCCCCeEEccCCCCceEEEecccccccCHH
Q 002039 279 --AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSSS 321 (977)
Q Consensus 279 --l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~~ 321 (977)
+..+|..|++|+|++|.||+++++ +.++|+|||.+..+...
T Consensus 109 ~~l~~lh~~~i~h~dl~p~ni~i~~~--~~~~l~d~~~~~~~~~~ 151 (253)
T cd05122 109 KGLEYLHSNGIIHRDIKAANILLTSD--GEVKLIDFGLSAQLSDT 151 (253)
T ss_pred HHHHHhhcCCEecCCCCHHHEEEccC--CeEEEeecccccccccc
Confidence 788999999999999999999865 89999999999887654
No 156
>cd05633 STKc_GRK3 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 3. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK3 (also known as beta-adrenergic receptor kinase 2) is wi
Probab=99.18 E-value=1.6e-10 Score=127.37 Aligned_cols=78 Identities=19% Similarity=0.195 Sum_probs=59.3
Q ss_pred cCCceEEeeccCCCCCCChHHHHhcCCCHHHHHHHHHHHH--HHHHHhcCccccCCCCCCeEEccCCCCceEEEeccccc
Q 002039 239 SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTK 316 (977)
Q Consensus 239 ~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~ 316 (977)
....++||||++|.+|.+... ....+....+...+.++. +..+|..|++|+|+||+||+++.+ +.++|+|||++.
T Consensus 69 ~~~~~lv~e~~~~~~L~~~i~-~~~~l~~~~~~~i~~qi~~al~~lH~~~ivH~dikp~Nil~~~~--~~~~l~dfg~~~ 145 (279)
T cd05633 69 PDKLCFILDLMNGGDLHYHLS-QHGVFSEKEMRFYATEIILGLEHMHNRFVVYRDLKPANILLDEH--GHVRISDLGLAC 145 (279)
T ss_pred CCeEEEEEecCCCCCHHHHHH-hcCCCCHHHHHHHHHHHHHHHHHHHHCCcCCCCCCHHHEEECCC--CCEEEccCCcce
Confidence 345689999999999976533 222345555555444443 788999999999999999999865 899999999987
Q ss_pred ccC
Q 002039 317 KLS 319 (977)
Q Consensus 317 ~l~ 319 (977)
.+.
T Consensus 146 ~~~ 148 (279)
T cd05633 146 DFS 148 (279)
T ss_pred ecc
Confidence 654
No 157
>cd06646 STKc_MAP4K5 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 5 (MAPKKKK5 or MAP4K5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated
Probab=99.18 E-value=9.5e-11 Score=127.78 Aligned_cols=139 Identities=14% Similarity=0.117 Sum_probs=92.7
Q ss_pred cccccccccEEEEEEe-cCCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCcHHHH
Q 002039 124 TPLATASIAQVHRATL-VDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (977)
Q Consensus 124 ~piasaSigqV~~A~l-~~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea 202 (977)
+.||+|++|.||+|+. .+|+.||||+.+....... . .+.+|+
T Consensus 15 ~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~~~~~~----~---------------------------------~~~~e~ 57 (267)
T cd06646 15 QRVGSGTYGDVYKARNLHTGELAAVKIIKLEPGDDF----S---------------------------------LIQQEI 57 (267)
T ss_pred heeecCCCeEEEEEEECCCCeEEEEEEEecCccchH----H---------------------------------HHHHHH
Confidence 6789999999999997 5789999998864321110 0 123344
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeee-cCCceEEeeccCCCCCCChHHHHhcCCCHHHHHHHHHHHH--H
Q 002039 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--A 279 (977)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~--l 279 (977)
..+.++.+ ...+.+...+. ....++||||++|.+|.++... ....+...+.....++. +
T Consensus 58 ~~l~~~~h-----------------~~ii~~~~~~~~~~~~~iv~e~~~~~~L~~~~~~-~~~~~~~~~~~~~~qi~~~l 119 (267)
T cd06646 58 FMVKECKH-----------------CNIVAYFGSYLSREKLWICMEYCGGGSLQDIYHV-TGPLSELQIAYVCRETLQGL 119 (267)
T ss_pred HHHHhcCC-----------------CCeeeeeEEEEeCCEEEEEEeCCCCCcHHHHHHh-cCCCCHHHHHHHHHHHHHHH
Confidence 44433321 01112222222 4556899999999999876432 22344444444444433 6
Q ss_pred HHHHhcCccccCCCCCCeEEccCCCCceEEEecccccccC
Q 002039 280 HQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 319 (977)
Q Consensus 280 ~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~ 319 (977)
..+|..|++|+|++|+||+++.+ +.++|+|||++..+.
T Consensus 120 ~~lH~~~i~H~dl~p~nill~~~--~~~~l~dfg~~~~~~ 157 (267)
T cd06646 120 AYLHSKGKMHRDIKGANILLTDN--GDVKLADFGVAAKIT 157 (267)
T ss_pred HHHHHCCccccCCCHHHEEECCC--CCEEECcCccceeec
Confidence 78899999999999999999855 889999999998764
No 158
>KOG0588 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=99.18 E-value=4.3e-11 Score=137.48 Aligned_cols=134 Identities=16% Similarity=0.180 Sum_probs=93.0
Q ss_pred cccccccccEEEEEEe-cCCCEEEEEEecCCh------hhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhccccc
Q 002039 124 TPLATASIAQVHRATL-VDGRQVVVKVQHQGI------KTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKEL 196 (977)
Q Consensus 124 ~piasaSigqV~~A~l-~~G~~VAVKv~~p~i------~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~El 196 (977)
+-+|.||-|.|..|+. .+|+.+||||..... ...|..++.
T Consensus 18 kTLG~Gstg~vrlakh~~TGqlaaiKii~k~~~~s~s~~~~IerEIv--------------------------------- 64 (786)
T KOG0588|consen 18 KTLGKGSTGCVRLAKHAETGQLAAIKIIPKRSELSSSQPAGIEREIV--------------------------------- 64 (786)
T ss_pred ccccCCCCceehhhhcccccceeEEEeeccccccccccccchhhhhH---------------------------------
Confidence 5689999999999997 589999999974321 112222222
Q ss_pred CcHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeee-cCCceEEeeccCCCCCCChHHHHhcCCCHHHHHHHHH
Q 002039 197 DFNSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEIT 275 (977)
Q Consensus 197 d~~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~ 275 (977)
-++-+.| ...+..-.|+. ..+.|||.||++|+.|-++.. +..++...+.+.-+.
T Consensus 65 -------iMkLi~H-----------------pnVl~LydVwe~~~~lylvlEyv~gGELFdylv-~kG~l~e~eaa~ff~ 119 (786)
T KOG0588|consen 65 -------IMKLIEH-----------------PNVLRLYDVWENKQHLYLVLEYVPGGELFDYLV-RKGPLPEREAAHFFR 119 (786)
T ss_pred -------HHHHhcC-----------------CCeeeeeeeeccCceEEEEEEecCCchhHHHHH-hhCCCCCHHHHHHHH
Confidence 2222211 12233334444 566799999999999988753 334455555555555
Q ss_pred HHH--HHHHHhcCccccCCCCCCeEEccCCCCceEEEecccccc
Q 002039 276 RAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKK 317 (977)
Q Consensus 276 ~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~ 317 (977)
+++ +...|..+|+|||+||.|+|++.. ++|+|.||||+..
T Consensus 120 QIi~gv~yCH~~~icHRDLKpENlLLd~~--~nIKIADFGMAsL 161 (786)
T KOG0588|consen 120 QILDGVSYCHAFNICHRDLKPENLLLDVK--NNIKIADFGMASL 161 (786)
T ss_pred HHHHHHHHHhhhcceeccCCchhhhhhcc--cCEeeeccceeec
Confidence 544 667789999999999999999976 6699999999863
No 159
>cd05041 PTKc_Fes_like Catalytic domain of Fes-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr k
Probab=99.18 E-value=1.4e-10 Score=125.09 Aligned_cols=140 Identities=16% Similarity=0.191 Sum_probs=93.7
Q ss_pred cccccccccEEEEEEecCCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCcHHHHH
Q 002039 124 TPLATASIAQVHRATLVDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEAE 203 (977)
Q Consensus 124 ~piasaSigqV~~A~l~~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea~ 203 (977)
+.||.|++|.||+|...+|+.|++|+.+....... ...+.+|.+
T Consensus 1 ~~lg~g~~g~v~~~~~~~~~~v~~K~~~~~~~~~~------------------------------------~~~~~~e~~ 44 (251)
T cd05041 1 EKIGKGNFGDVYKGVLKGNTEVAVKTCRSTLPPDL------------------------------------KRKFLQEAE 44 (251)
T ss_pred CccccCCCceEEEEEEeCCCcEEEEeccccCCHHH------------------------------------HHHHHHHHH
Confidence 36899999999999987799999997654322100 002334444
Q ss_pred HHHHHHHHhCCCCCCCCCCCCCCCCCCe-Eeceeee-cCCceEEeeccCCCCCCChHHHHhcCCCHHHHHHHHHHHH--H
Q 002039 204 NTRIVSANLGCKNKHEDSNKKPAYEVDV-LIPEVIQ-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--A 279 (977)
Q Consensus 204 n~~~~~~~~~~~~~~~~~~~~~~~~~~v-~vP~v~~-~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~--l 279 (977)
.+.++.+ +.+ .+-..+. ....++||||++|.+|.++........+...+...+.++. +
T Consensus 45 ~l~~l~~------------------~~i~~~~~~~~~~~~~~~v~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~l 106 (251)
T cd05041 45 ILKQYDH------------------PNIVKLIGVCVQKQPIYIVMELVPGGSLLTFLRKKKNRLTVKKLLQMSLDAAAGM 106 (251)
T ss_pred HHHhCCC------------------CCeEEEEEEEecCCCeEEEEEcCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHH
Confidence 4333321 111 1112222 5667999999999998876432222345555555444443 6
Q ss_pred HHHHhcCccccCCCCCCeEEccCCCCceEEEecccccccC
Q 002039 280 HQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 319 (977)
Q Consensus 280 ~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~ 319 (977)
..+|..|++|+|++|.||+++.+ ++++|+|||++....
T Consensus 107 ~~lH~~~i~h~di~p~nili~~~--~~~~l~d~g~~~~~~ 144 (251)
T cd05041 107 EYLESKNCIHRDLAARNCLVGEN--NVLKISDFGMSREEE 144 (251)
T ss_pred HHHHhCCEehhhcCcceEEEcCC--CcEEEeecccccccc
Confidence 78999999999999999999865 899999999987654
No 160
>cd05109 PTKc_HER2 Catalytic domain of the Protein Tyrosine Kinase, HER2. Protein Tyrosine Kinase (PTK) family; HER2 (ErbB2, HER2/neu); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER2 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve
Probab=99.18 E-value=1.3e-10 Score=127.61 Aligned_cols=80 Identities=19% Similarity=0.150 Sum_probs=61.7
Q ss_pred cCCceEEeeccCCCCCCChHHHHhcCCCHHHHHHHHHHHH--HHHHHhcCccccCCCCCCeEEccCCCCceEEEeccccc
Q 002039 239 SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTK 316 (977)
Q Consensus 239 ~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~ 316 (977)
....+++|||+++++|.+........+....+...+.++. +..+|..|++|+|+||+||+++.+ +.++|+|||++.
T Consensus 80 ~~~~~l~~~~~~~g~l~~~l~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~iiH~dlkp~Nil~~~~--~~~kL~dfG~~~ 157 (279)
T cd05109 80 TSTVQLVTQLMPYGCLLDYVRENKDRIGSQDLLNWCVQIAKGMSYLEEVRLVHRDLAARNVLVKSP--NHVKITDFGLAR 157 (279)
T ss_pred CCCcEEEEEcCCCCCHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHCCeeccccccceEEEcCC--CcEEECCCCcee
Confidence 4556899999999998776432222355556666555555 788999999999999999999855 789999999988
Q ss_pred ccCH
Q 002039 317 KLSS 320 (977)
Q Consensus 317 ~l~~ 320 (977)
.++.
T Consensus 158 ~~~~ 161 (279)
T cd05109 158 LLDI 161 (279)
T ss_pred eccc
Confidence 7653
No 161
>cd06641 STKc_MST3 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and int
Probab=99.18 E-value=1.4e-10 Score=127.41 Aligned_cols=148 Identities=14% Similarity=0.148 Sum_probs=99.0
Q ss_pred hhhcccccCccccccccccEEEEEEe-cCCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhc
Q 002039 114 MGGMFMDFVETPLATASIAQVHRATL-VDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEA 192 (977)
Q Consensus 114 ~~~~f~~~d~~piasaSigqV~~A~l-~~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l 192 (977)
++++|..+ +.||+|++|.||+|.. .+|+.||||+.........
T Consensus 2 ~~~~~~~~--~~ig~G~~~~vy~~~~~~~~~~~aiK~~~~~~~~~~---------------------------------- 45 (277)
T cd06641 2 PEELFTKL--EKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDE---------------------------------- 45 (277)
T ss_pred HHHhhhhh--eeEeecCCeEEEEEEECCCCcEEEEEEeccccchHH----------------------------------
Confidence 35566554 4599999999999986 4789999997642211000
Q ss_pred ccccCcHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeee-cCCceEEeeccCCCCCCChHHHHhcCCCHHHHH
Q 002039 193 PKELDFNSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVV 271 (977)
Q Consensus 193 ~~Eld~~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~ 271 (977)
.-++.+|...+.++.+ ..-+.+...+. ....++||||++|.+|.++. .....+...+.
T Consensus 46 --~~~~~~e~~~l~~l~h-----------------~~iv~~~~~~~~~~~~~lv~e~~~~~~l~~~i--~~~~~~~~~~~ 104 (277)
T cd06641 46 --IEDIQQEITVLSQCDS-----------------PYVTKYYGSYLKDTKLWIIMEYLGGGSALDLL--EPGPLDETQIA 104 (277)
T ss_pred --HHHHHHHHHHHHhcCC-----------------CCEeEEEEEEEeCCeEEEEEEeCCCCcHHHHH--hcCCCCHHHHH
Confidence 0123445444444321 11122222222 46679999999999887663 33445566555
Q ss_pred HHHHHHH--HHHHHhcCccccCCCCCCeEEccCCCCceEEEecccccccCH
Q 002039 272 EEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 320 (977)
Q Consensus 272 ~~l~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 320 (977)
..+.+++ +..+|..|++|+|++|+||+++.+ +.++|+|||++..+..
T Consensus 105 ~~~~~l~~~l~~lh~~~i~h~dl~p~Ni~i~~~--~~~~l~dfg~~~~~~~ 153 (277)
T cd06641 105 TILREILKGLDYLHSEKKIHRDIKAANVLLSEH--GEVKLADFGVAGQLTD 153 (277)
T ss_pred HHHHHHHHHHHHHccCCeecCCCCHHhEEECCC--CCEEEeecccceeccc
Confidence 5555544 678899999999999999999855 8899999999877654
No 162
>cd05610 STKc_MASTL Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ1481
Probab=99.18 E-value=8.7e-11 Score=144.99 Aligned_cols=142 Identities=18% Similarity=0.240 Sum_probs=91.7
Q ss_pred cccccccccEEEEEEec-CCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCcHHHH
Q 002039 124 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (977)
Q Consensus 124 ~piasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea 202 (977)
+.||.|++|.||+|+.. +|+.||||+.+..... +-. ... .+..|.
T Consensus 10 ~~LG~G~fg~Vy~a~~~~~~~~vAiKvi~~~~~~----~~~------------------------~~~------~~~~E~ 55 (669)
T cd05610 10 KPISRGAFGKVYLGRKKNNSKLYAVKVVKKADMI----NKN------------------------MVH------QVQAER 55 (669)
T ss_pred EEEecCCCeEEEEEEECCCCcEEEEEEEehhhcc----CHH------------------------HHH------HHHHHH
Confidence 67999999999999985 7999999997642100 000 000 122333
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeee-cCCceEEeeccCCCCCCChHHHHhcCCCHHHHHHHHHHHH--H
Q 002039 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--A 279 (977)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~--l 279 (977)
..+..+++ ...+.+-..+. ....+|||||++|.+|.++.... ..++...+...+.+++ +
T Consensus 56 ~~l~~l~h-----------------p~Iv~~~~~~~~~~~~~lVmEy~~g~~L~~li~~~-~~l~~~~~~~i~~qil~aL 117 (669)
T cd05610 56 DALALSKS-----------------PFIVHLYYSLQSANNVYLVMEYLIGGDVKSLLHIY-GYFDEEMAVKYISEVALAL 117 (669)
T ss_pred HHHHhcCC-----------------CCcCeEEEEEEECCEEEEEEeCCCCCCHHHHHHhc-CCCCHHHHHHHHHHHHHHH
Confidence 33333221 00111112222 45678999999999998764321 2234444444444433 7
Q ss_pred HHHHhcCccccCCCCCCeEEccCCCCceEEEecccccccC
Q 002039 280 HQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 319 (977)
Q Consensus 280 ~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~ 319 (977)
..+|..||+|+||||.|||++.+ +.++|+|||+++...
T Consensus 118 ~yLH~~gIiHrDLKP~NILl~~~--g~vkL~DFGls~~~~ 155 (669)
T cd05610 118 DYLHRHGIIHRDLKPDNMLISNE--GHIKLTDFGLSKVTL 155 (669)
T ss_pred HHHHhCCEEeCCccHHHEEEcCC--CCEEEEeCCCCcccc
Confidence 88999999999999999999865 899999999988654
No 163
>KOG0197 consensus Tyrosine kinases [Signal transduction mechanisms]
Probab=99.17 E-value=5e-11 Score=135.11 Aligned_cols=138 Identities=17% Similarity=0.206 Sum_probs=107.1
Q ss_pred cccccccccEEEEEEecCCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCcHHHHH
Q 002039 124 TPLATASIAQVHRATLVDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEAE 203 (977)
Q Consensus 124 ~piasaSigqV~~A~l~~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea~ 203 (977)
+-||+|-||.||.|+.....+||||.++++-. .+-+|.+||.
T Consensus 212 ~~LG~G~FG~V~~g~~~~~~~vavk~ik~~~m--------------------------------------~~~~f~~Ea~ 253 (468)
T KOG0197|consen 212 RELGSGQFGEVWLGKWNGSTKVAVKTIKEGSM--------------------------------------SPEAFLREAQ 253 (468)
T ss_pred HHhcCCccceEEEEEEcCCCcccceEEecccc--------------------------------------ChhHHHHHHH
Confidence 56899999999999996666999999987621 2236778999
Q ss_pred HHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeee-cC---CceEEeeccCCCCCCChHHH-HhcCCCHHHHHHHHHHHH
Q 002039 204 NTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SS---ETVLILEFMDGIRLNDCESL-EAFGVNKQKVVEEITRAY 278 (977)
Q Consensus 204 n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~---~~vLVmE~i~G~~L~~~~~~-~~~~~~~~~l~~~l~~~~ 278 (977)
-+.+++|. .+-+.+. |+ .-+|||||++-++|.++..- ....++..+++....++.
T Consensus 254 iMk~L~H~--------------------~lV~l~gV~~~~~piyIVtE~m~~GsLl~yLr~~~~~~l~~~~Ll~~a~qIa 313 (468)
T KOG0197|consen 254 IMKKLRHE--------------------KLVKLYGVCTKQEPIYIVTEYMPKGSLLDYLRTREGGLLNLPQLLDFAAQIA 313 (468)
T ss_pred HHHhCccc--------------------CeEEEEEEEecCCceEEEEEecccCcHHHHhhhcCCCccchHHHHHHHHHHH
Confidence 99888751 2333333 32 25899999999999888553 234466777777777776
Q ss_pred --HHHHHhcCccccCCCCCCeEEccCCCCceEEEecccccccCHH
Q 002039 279 --AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSSS 321 (977)
Q Consensus 279 --l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~~ 321 (977)
+..|-..++|||||-..||||+++ ..+++.|||+++.+.++
T Consensus 314 eGM~YLes~~~IHRDLAARNiLV~~~--~~vKIsDFGLAr~~~d~ 356 (468)
T KOG0197|consen 314 EGMAYLESKNYIHRDLAARNILVDED--LVVKISDFGLARLIGDD 356 (468)
T ss_pred HHHHHHHhCCccchhhhhhheeeccC--ceEEEcccccccccCCC
Confidence 778888999999999999999966 88999999999965543
No 164
>KOG0694 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.17 E-value=5.2e-11 Score=137.88 Aligned_cols=138 Identities=15% Similarity=0.179 Sum_probs=92.7
Q ss_pred cccccccccEEEEEEec-CCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCcHHHH
Q 002039 124 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (977)
Q Consensus 124 ~piasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea 202 (977)
..+|.||||.|+.|.++ +++..|||+++.+.--+ ..|++. .+.|.
T Consensus 374 ~vLGkGsFGkV~lae~k~~~e~yAIK~LKK~~Il~-~d~Ve~---------------------------------~~~Ek 419 (694)
T KOG0694|consen 374 AVLGRGSFGKVLLAELKGTNEYYAIKVLKKGDILQ-RDEVES---------------------------------LMCEK 419 (694)
T ss_pred EEeccCcCceEEEEEEcCCCcEEEEEEeeccceec-cccHHH---------------------------------HHHHH
Confidence 67999999999999986 78899999998764210 111111 12233
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeee----cCCceEEeeccCCCCCCChHHHHhcCCCHHHHHHHHHH--
Q 002039 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ----SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITR-- 276 (977)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~----~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~-- 276 (977)
+-++...+ ...+-..+. .++-+.||||+.|+.+..+.. ...++..++.-..++
T Consensus 420 rI~~la~~-------------------HPFL~~L~~~fQT~~~l~fvmey~~Ggdm~~~~~--~~~F~e~rarfyaAev~ 478 (694)
T KOG0694|consen 420 RIFELANR-------------------HPFLVNLFSCFQTKEHLFFVMEYVAGGDLMHHIH--TDVFSEPRARFYAAEVV 478 (694)
T ss_pred HHHHHhcc-------------------CCeEeecccccccCCeEEEEEEecCCCcEEEEEe--cccccHHHHHHHHHHHH
Confidence 33222210 112223332 345578999999999766532 233444443333333
Q ss_pred HHHHHHHhcCccccCCCCCCeEEccCCCCceEEEeccccccc
Q 002039 277 AYAHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKL 318 (977)
Q Consensus 277 ~~l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l 318 (977)
..++.+|++||++||+|-.|||++.+ |.++|+||||++.-
T Consensus 479 l~L~fLH~~~IIYRDlKLdNiLLD~e--Gh~kiADFGlcKe~ 518 (694)
T KOG0694|consen 479 LGLQFLHENGIIYRDLKLDNLLLDTE--GHVKIADFGLCKEG 518 (694)
T ss_pred HHHHHHHhcCceeeecchhheEEccc--CcEEeccccccccc
Confidence 34889999999999999999999966 99999999999875
No 165
>cd06642 STKc_STK25-YSK1 Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1. Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25
Probab=99.17 E-value=6.5e-11 Score=129.97 Aligned_cols=144 Identities=15% Similarity=0.188 Sum_probs=94.0
Q ss_pred hhcccccCccccccccccEEEEEEec-CCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcc
Q 002039 115 GGMFMDFVETPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAP 193 (977)
Q Consensus 115 ~~~f~~~d~~piasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~ 193 (977)
.+.|..+ +.||+|++|.||+|.+. +|+.||||+...........
T Consensus 3 ~~~y~~~--~~l~~g~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~--------------------------------- 47 (277)
T cd06642 3 EELFTKL--ERIGKGSFGEVYKGIDNRTKEVVAIKIIDLEEAEDEIE--------------------------------- 47 (277)
T ss_pred HHHHHHH--HHhcCCCCeeEEEEEEcCCCeEEEEEEeccccchHHHH---------------------------------
Confidence 4455544 46999999999999874 68899999875332111000
Q ss_pred cccCcHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceee---e-cCCceEEeeccCCCCCCChHHHHhcCCCHHH
Q 002039 194 KELDFNSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVI---Q-SSETVLILEFMDGIRLNDCESLEAFGVNKQK 269 (977)
Q Consensus 194 ~Eld~~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~---~-~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~ 269 (977)
++.+|+..+.++.+ -.|++++ . ....++||||++|.+|.+.. .........
T Consensus 48 ---~~~~e~~~l~~l~h--------------------~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~--~~~~~~~~~ 102 (277)
T cd06642 48 ---DIQQEITVLSQCDS--------------------PYITRYYGSYLKGTKLWIIMEYLGGGSALDLL--KPGPLEETY 102 (277)
T ss_pred ---HHHHHHHHHHcCCC--------------------CccHhhhcccccCCceEEEEEccCCCcHHHHh--hcCCCCHHH
Confidence 12334443333321 1111111 1 45568999999999887653 333344444
Q ss_pred HHHHHHHHH--HHHHHhcCccccCCCCCCeEEccCCCCceEEEecccccccCH
Q 002039 270 VVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 320 (977)
Q Consensus 270 l~~~l~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 320 (977)
+...+.++. +..+|..|++|+|+||+||+++.+ +.++|+|||++..+..
T Consensus 103 ~~~~~~~i~~~l~~lH~~~ivH~dl~p~ni~i~~~--~~~~l~dfg~~~~~~~ 153 (277)
T cd06642 103 IATILREILKGLDYLHSERKIHRDIKAANVLLSEQ--GDVKLADFGVAGQLTD 153 (277)
T ss_pred HHHHHHHHHHHHHHHhcCCeeccCCChheEEEeCC--CCEEEccccccccccC
Confidence 444444433 677899999999999999999865 8899999999987764
No 166
>cd06611 STKc_SLK_like Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated anti
Probab=99.17 E-value=1.2e-10 Score=127.96 Aligned_cols=140 Identities=19% Similarity=0.179 Sum_probs=95.5
Q ss_pred cccccccccEEEEEEec-CCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCcHHHH
Q 002039 124 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (977)
Q Consensus 124 ~piasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea 202 (977)
+.||.|++|+||+|+.+ +++.||+|+.+....... -+|..|+
T Consensus 11 ~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~-------------------------------------~~~~~e~ 53 (280)
T cd06611 11 GELGDGAFGKVYKAQHKETGLFAAAKIIQIESEEEL-------------------------------------EDFMVEI 53 (280)
T ss_pred HHhcCCCCceEEEEEEcCCCcEEEEEEEeeCCHHHH-------------------------------------HHHHHHH
Confidence 46899999999999974 789999998764322111 0234455
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeee-cCCceEEeeccCCCCCCChHHHHhcCCCHHHHHHHHHHHH--H
Q 002039 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--A 279 (977)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~--l 279 (977)
..+.++.+ ..-+.+...+. ....++||||++|.+|.++.......++...+...+.++. +
T Consensus 54 ~~l~~l~h-----------------~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~l~~~~~~~~~~ql~~~l 116 (280)
T cd06611 54 DILSECKH-----------------PNIVGLYEAYFYENKLWILIEFCDGGALDSIMLELERGLTEPQIRYVCRQMLEAL 116 (280)
T ss_pred HHHHhCCC-----------------CceeEEEEEEecCCeEEEEeeccCCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHH
Confidence 54444421 11122222222 4556899999999999877443223455555555544443 6
Q ss_pred HHHHhcCccccCCCCCCeEEccCCCCceEEEecccccccC
Q 002039 280 HQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 319 (977)
Q Consensus 280 ~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~ 319 (977)
..+|..|++|+|++|.||+++.+ +.++|+|||.+....
T Consensus 117 ~~lh~~~i~h~dl~p~nili~~~--~~~~l~d~g~~~~~~ 154 (280)
T cd06611 117 NFLHSHKVIHRDLKAGNILLTLD--GDVKLADFGVSAKNK 154 (280)
T ss_pred HHHHHCCcccCCCChhhEEECCC--CCEEEccCccchhhc
Confidence 78899999999999999999865 899999999876653
No 167
>cd06640 STKc_MST4 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by inter
Probab=99.17 E-value=1.5e-10 Score=127.19 Aligned_cols=147 Identities=14% Similarity=0.152 Sum_probs=97.2
Q ss_pred hhcccccCccccccccccEEEEEEec-CCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcc
Q 002039 115 GGMFMDFVETPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAP 193 (977)
Q Consensus 115 ~~~f~~~d~~piasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~ 193 (977)
++.|..+ +.||+|++|+||+|+.+ +++.||||+........ .
T Consensus 3 ~~~y~~~--~~lg~g~~~~vy~~~~~~~~~~vaiK~~~~~~~~~---~-------------------------------- 45 (277)
T cd06640 3 EELFTKL--ERIGKGSFGEVFKGIDNRTQQVVAIKIIDLEEAED---E-------------------------------- 45 (277)
T ss_pred HHhhhhh--hhcccCCCeEEEEEEEccCCEEEEEEEEeccccHH---H--------------------------------
Confidence 3444443 56999999999999975 68999999865221100 0
Q ss_pred cccCcHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeee-cCCceEEeeccCCCCCCChHHHHhcCCCHHHHHH
Q 002039 194 KELDFNSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVE 272 (977)
Q Consensus 194 ~Eld~~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~ 272 (977)
..++.+|...+.++.+ ...+.+...+. ....++||||++|.+|.+.. .....+...+..
T Consensus 46 -~~~~~~e~~~l~~l~h-----------------~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~i--~~~~l~~~~~~~ 105 (277)
T cd06640 46 -IEDIQQEITVLSQCDS-----------------PYVTKYYGSYLKGTKLWIIMEYLGGGSALDLL--RAGPFDEFQIAT 105 (277)
T ss_pred -HHHHHHHHHHHHhCCC-----------------CCEeeEEEEEEECCEEEEEEecCCCCcHHHHH--hcCCCCHHHHHH
Confidence 0123344444433321 01122222222 46679999999999997763 333455555555
Q ss_pred HHHHHH--HHHHHhcCccccCCCCCCeEEccCCCCceEEEecccccccCH
Q 002039 273 EITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 320 (977)
Q Consensus 273 ~l~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 320 (977)
.+.+++ +..+|..|++|+|++|+||+++.+ ++++|+|||++..+..
T Consensus 106 ~~~~l~~~l~~lh~~~ivH~dl~p~Nil~~~~--~~~~l~dfg~~~~~~~ 153 (277)
T cd06640 106 MLKEILKGLDYLHSEKKIHRDIKAANVLLSEQ--GDVKLADFGVAGQLTD 153 (277)
T ss_pred HHHHHHHHHHHHHhCCccCcCCChhhEEEcCC--CCEEEcccccceeccC
Confidence 444443 678899999999999999999865 8899999999877654
No 168
>cd05570 STKc_PKC Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C. Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only re
Probab=99.17 E-value=7.8e-11 Score=132.50 Aligned_cols=76 Identities=14% Similarity=0.193 Sum_probs=57.7
Q ss_pred cCCceEEeeccCCCCCCChHHHHhcCCCHHHHHHHHHHHH--HHHHHhcCccccCCCCCCeEEccCCCCceEEEeccccc
Q 002039 239 SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTK 316 (977)
Q Consensus 239 ~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~ 316 (977)
....++||||++|.+|.+... ....++...+...+.+++ +..+|..|++|+|+||.||+++.+ +.++|+|||++.
T Consensus 68 ~~~~~lv~e~~~~~~L~~~~~-~~~~l~~~~~~~~~~qi~~~l~~LH~~~ivH~dlkp~Nill~~~--~~~kl~Dfg~~~ 144 (318)
T cd05570 68 KDRLFFVMEYVNGGDLMFHIQ-RSGRFDEPRARFYAAEIVLGLQFLHERGIIYRDLKLDNVLLDSE--GHIKIADFGMCK 144 (318)
T ss_pred CCEEEEEEcCCCCCCHHHHHH-HcCCCCHHHHHHHHHHHHHHHHHHHhCCeEccCCCHHHeEECCC--CcEEecccCCCe
Confidence 345689999999998876532 222455555554444443 778999999999999999999865 899999999876
Q ss_pred c
Q 002039 317 K 317 (977)
Q Consensus 317 ~ 317 (977)
.
T Consensus 145 ~ 145 (318)
T cd05570 145 E 145 (318)
T ss_pred e
Confidence 4
No 169
>cd07862 STKc_CDK6 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytopla
Probab=99.17 E-value=7.3e-11 Score=130.42 Aligned_cols=77 Identities=22% Similarity=0.306 Sum_probs=56.1
Q ss_pred CCceEEeeccCCCCCCChHHHH-hcCCCHHHHHHHHHHHH--HHHHHhcCccccCCCCCCeEEccCCCCceEEEeccccc
Q 002039 240 SETVLILEFMDGIRLNDCESLE-AFGVNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTK 316 (977)
Q Consensus 240 ~~~vLVmE~i~G~~L~~~~~~~-~~~~~~~~l~~~l~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~ 316 (977)
...++||||++| +|.+..... ..+++...+...+.++. +..+|..|++|+|+||.|||++.+ +.++|+|||++.
T Consensus 82 ~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~lH~~~iiH~dlkp~Nil~~~~--~~~kl~Dfg~~~ 158 (290)
T cd07862 82 TKLTLVFEHVDQ-DLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHSHRVVHRDLKPQNILVTSS--GQIKLADFGLAR 158 (290)
T ss_pred CcEEEEEccCCC-CHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCHHHEEEcCC--CCEEEccccceE
Confidence 346899999986 555443211 12345555555444444 788999999999999999999865 899999999987
Q ss_pred ccC
Q 002039 317 KLS 319 (977)
Q Consensus 317 ~l~ 319 (977)
.++
T Consensus 159 ~~~ 161 (290)
T cd07862 159 IYS 161 (290)
T ss_pred ecc
Confidence 664
No 170
>KOG0662 consensus Cyclin-dependent kinase CDK5 [Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]
Probab=99.17 E-value=3.9e-11 Score=117.16 Aligned_cols=138 Identities=18% Similarity=0.226 Sum_probs=85.6
Q ss_pred cccccccccEEEEEEec-CCCEEEEEEecC-----ChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccC
Q 002039 124 TPLATASIAQVHRATLV-DGRQVVVKVQHQ-----GIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELD 197 (977)
Q Consensus 124 ~piasaSigqV~~A~l~-~G~~VAVKv~~p-----~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld 197 (977)
+.||.|.+|.|++|+.+ +++-||+|-.|- |++.... +|+.
T Consensus 8 ekigegtygtvfkarn~~t~eivalkrvrlddddegvpssal----------------------------------reic 53 (292)
T KOG0662|consen 8 EKIGEGTYGTVFKARNRETHEIVALKRVRLDDDDEGVPSSAL----------------------------------REIC 53 (292)
T ss_pred HhhcCCcceeeEecccCCccceEEEEEEeccCCCCCCcHHHH----------------------------------HHHH
Confidence 46899999999999975 689999997663 2222222 2333
Q ss_pred cHHHHH--HHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeeecCCceEEeeccCCCCCCChHHHHhcCCCHHHHHHHHH
Q 002039 198 FNSEAE--NTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQSSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEIT 275 (977)
Q Consensus 198 ~~~Ea~--n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~ 275 (977)
+.+|.+ |+.++.+.+. ...+..||.|||+- .|..+.......++.+.+-.-++
T Consensus 54 llkelkhknivrl~dvlh------------------------sdkkltlvfe~cdq-dlkkyfdslng~~d~~~~rsfml 108 (292)
T KOG0662|consen 54 LLKELKHKNIVRLHDVLH------------------------SDKKLTLVFEFCDQ-DLKKYFDSLNGDLDPEIVRSFML 108 (292)
T ss_pred HHHHhhhcceeehhhhhc------------------------cCceeEEeHHHhhH-HHHHHHHhcCCcCCHHHHHHHHH
Confidence 344433 3333332221 13344689999972 22222111122344443333333
Q ss_pred HHH--HHHHHhcCccccCCCCCCeEEccCCCCceEEEecccccccCHHH
Q 002039 276 RAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSSSM 322 (977)
Q Consensus 276 ~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~~~ 322 (977)
+.+ +...|.+++.|||+||.|++|+.+ |.++|.|||+++.+.-..
T Consensus 109 qllrgl~fchshnvlhrdlkpqnllin~n--gelkladfglarafgipv 155 (292)
T KOG0662|consen 109 QLLRGLGFCHSHNVLHRDLKPQNLLINRN--GELKLADFGLARAFGIPV 155 (292)
T ss_pred HHHhhhhhhhhhhhhhccCCcceEEeccC--CcEEecccchhhhcCCce
Confidence 333 444577999999999999999966 999999999988765433
No 171
>cd07859 STKc_TDY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TDY Mitogen-Activated Protein Kinases from Plants. Serine/Threonine Kinases (STKs), Plant TDY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TDY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. Oryza sativa contains at least 17 MAPKs. There are two subtypes of plant MAPKs based on the conserved phos
Probab=99.17 E-value=8.7e-11 Score=132.81 Aligned_cols=139 Identities=17% Similarity=0.215 Sum_probs=89.4
Q ss_pred cccccccccEEEEEEec-CCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCcHHHH
Q 002039 124 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (977)
Q Consensus 124 ~piasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea 202 (977)
+.||.|++|.||+|+.+ +|+.||||+.+...... .....+.+|+
T Consensus 6 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~-----------------------------------~~~~~~~~E~ 50 (338)
T cd07859 6 EVIGKGSYGVVCSAIDTHTGEKVAIKKINDVFEHV-----------------------------------SDATRILREI 50 (338)
T ss_pred EEEeecCCeEEEEEEECCCCCEEEEEEechhhccc-----------------------------------hhHHHHHHHH
Confidence 56999999999999974 79999999765321100 0001234565
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeee------cCCceEEeeccCCCCCCChHHHHhcCCCHHHHHHHHHH
Q 002039 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ------SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITR 276 (977)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~------~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~ 276 (977)
+.+.++++ ...+.+-.++. ....++||||++| +|.+... ....++...+...+.+
T Consensus 51 ~~l~~l~h-----------------pniv~~~~~~~~~~~~~~~~~~lv~e~~~~-~L~~~l~-~~~~~~~~~~~~i~~q 111 (338)
T cd07859 51 KLLRLLRH-----------------PDIVEIKHIMLPPSRREFKDIYVVFELMES-DLHQVIK-ANDDLTPEHHQFFLYQ 111 (338)
T ss_pred HHHHhCCC-----------------CCEeeecceEeccCCCCCceEEEEEecCCC-CHHHHHH-hcccCCHHHHHHHHHH
Confidence 55555432 11122222221 1235899999965 5544422 1223455554444444
Q ss_pred HH--HHHHHhcCccccCCCCCCeEEccCCCCceEEEeccccccc
Q 002039 277 AY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKL 318 (977)
Q Consensus 277 ~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l 318 (977)
+. +..+|..|++|+|+||.|||++.+ +.++|+|||++...
T Consensus 112 i~~aL~~LH~~~ivH~dlkp~NIll~~~--~~~kL~Dfg~~~~~ 153 (338)
T cd07859 112 LLRALKYIHTANVFHRDLKPKNILANAD--CKLKICDFGLARVA 153 (338)
T ss_pred HHHHHHHHHHCCeecCCCCHHHeEECCC--CcEEEccCcccccc
Confidence 43 788999999999999999999865 89999999998754
No 172
>smart00219 TyrKc Tyrosine kinase, catalytic domain. Phosphotransferases. Tyrosine-specific kinase subfamily.
Probab=99.17 E-value=1.1e-10 Score=126.02 Aligned_cols=140 Identities=19% Similarity=0.234 Sum_probs=95.7
Q ss_pred cccccccccEEEEEEecC-----CCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCc
Q 002039 124 TPLATASIAQVHRATLVD-----GRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDF 198 (977)
Q Consensus 124 ~piasaSigqV~~A~l~~-----G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~ 198 (977)
+.+|.|++|+||+|+..+ ++.||+|+.++...... +-++
T Consensus 5 ~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~~~~~------------------------------------~~~~ 48 (258)
T smart00219 5 KKLGEGAFGEVYKGTLKGLSGEKEVEVAVKTLKEDADEQQ------------------------------------IEEF 48 (258)
T ss_pred ceeccCCCcceEEEEecCCCCCCCceEEEEEccCCCChHH------------------------------------HHHH
Confidence 578999999999999753 48899999876532110 0023
Q ss_pred HHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeee----cCCceEEeeccCCCCCCChHHHHhcC-CCHHHHHHH
Q 002039 199 NSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ----SSETVLILEFMDGIRLNDCESLEAFG-VNKQKVVEE 273 (977)
Q Consensus 199 ~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~----~~~~vLVmE~i~G~~L~~~~~~~~~~-~~~~~l~~~ 273 (977)
..|.+.+.++.+ ..|.+++. ....+++|||++|.+|.+........ .+...+...
T Consensus 49 ~~e~~~l~~l~~--------------------~~i~~~~~~~~~~~~~~~i~e~~~~~~l~~~~~~~~~~~~~~~~~~~~ 108 (258)
T smart00219 49 LREARIMRKLDH--------------------PNIVKLLGVCTEEEPLMIVMEYMEGGDLLDYLRKNRPKELSLSDLLSF 108 (258)
T ss_pred HHHHHHHHhcCC--------------------CchheEEEEEcCCCeeEEEEeccCCCCHHHHHHhhhhccCCHHHHHHH
Confidence 334444443311 11222222 45678999999999998775432222 555555555
Q ss_pred HHHHH--HHHHHhcCccccCCCCCCeEEccCCCCceEEEecccccccCHH
Q 002039 274 ITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSSS 321 (977)
Q Consensus 274 l~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~~ 321 (977)
+.+++ +..+|..|++|+|++|+||+++.+ +.++|+|||++......
T Consensus 109 ~~ql~~~l~~lh~~~~~h~dl~~~nil~~~~--~~~~l~dfg~~~~~~~~ 156 (258)
T smart00219 109 ALQIARGMEYLESKNFIHRDLAARNCLVGEN--LVVKISDFGLSRDLYDD 156 (258)
T ss_pred HHHHHHHHHHHhcCCeeecccccceEEEccC--CeEEEcccCCceecccc
Confidence 55444 778899999999999999999865 78999999998876543
No 173
>cd05083 PTKc_Chk Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase. Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src ki
Probab=99.17 E-value=9.6e-11 Score=126.81 Aligned_cols=136 Identities=18% Similarity=0.159 Sum_probs=90.7
Q ss_pred cccccccccEEEEEEecCCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCcHHHHH
Q 002039 124 TPLATASIAQVHRATLVDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEAE 203 (977)
Q Consensus 124 ~piasaSigqV~~A~l~~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea~ 203 (977)
+.+|.|++|+||++.. +|+.||||+.+..... -.+.+|..
T Consensus 12 ~~lg~g~~g~v~~~~~-~~~~~~iK~~~~~~~~---------------------------------------~~~~~e~~ 51 (254)
T cd05083 12 EIIGEGEFGAVLQGEY-TGQKVAVKNIKCDVTA---------------------------------------QAFLEETA 51 (254)
T ss_pred eeeccCCCCceEeccc-CCCceEEEeecCcchH---------------------------------------HHHHHHHH
Confidence 6799999999999974 7899999986532110 01333444
Q ss_pred HHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeeecCCceEEeeccCCCCCCChHHHHh-cCCCHHHHHHHHHHHH--HH
Q 002039 204 NTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQSSETVLILEFMDGIRLNDCESLEA-FGVNKQKVVEEITRAY--AH 280 (977)
Q Consensus 204 n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~~~~~vLVmE~i~G~~L~~~~~~~~-~~~~~~~l~~~l~~~~--l~ 280 (977)
.+.++.+ ..-+.+...+.....+++|||++|.+|.++..... ...+...+...+.+++ +.
T Consensus 52 ~l~~~~~-----------------~~i~~~~~~~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~al~ 114 (254)
T cd05083 52 VMTKLHH-----------------KNLVRLLGVILHNGLYIVMELMSKGNLVNFLRTRGRALVSVIQLLQFSLDVAEGME 114 (254)
T ss_pred HHHhCCC-----------------CCcCeEEEEEcCCCcEEEEECCCCCCHHHHHHhcCcCCCCHHHHHHHHHHHHHHHH
Confidence 4333321 11122333333455789999999999987743221 1234444444333333 67
Q ss_pred HHHhcCccccCCCCCCeEEccCCCCceEEEeccccccc
Q 002039 281 QIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKL 318 (977)
Q Consensus 281 ~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l 318 (977)
.+|..|++|+|+||+||+++.+ +.++|+|||++...
T Consensus 115 ~lH~~~~~H~dl~p~nili~~~--~~~kl~Dfg~~~~~ 150 (254)
T cd05083 115 YLESKKLVHRDLAARNILVSED--GVAKVSDFGLARVG 150 (254)
T ss_pred HHHhCCeeccccCcceEEEcCC--CcEEECCCccceec
Confidence 8899999999999999999865 89999999998754
No 174
>cd05034 PTKc_Src_like Catalytic domain of Src kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-t
Probab=99.17 E-value=1.1e-10 Score=126.71 Aligned_cols=137 Identities=17% Similarity=0.189 Sum_probs=94.6
Q ss_pred cccccccccEEEEEEecCCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCcHHHHH
Q 002039 124 TPLATASIAQVHRATLVDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEAE 203 (977)
Q Consensus 124 ~piasaSigqV~~A~l~~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea~ 203 (977)
+.||+|++|.||+|+..+++.||||+.+++.... -++.+|..
T Consensus 12 ~~ig~g~~~~v~~~~~~~~~~~~vK~~~~~~~~~--------------------------------------~~~~~e~~ 53 (261)
T cd05034 12 RKLGAGQFGEVWMGTWNGTTKVAVKTLKPGTMSP--------------------------------------EAFLQEAQ 53 (261)
T ss_pred eeeccCcceEEEEEEEcCCceEEEEEecCCccCH--------------------------------------HHHHHHHH
Confidence 6799999999999998888999999876532110 02334444
Q ss_pred HHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeee----cCCceEEeeccCCCCCCChHHHHh-cCCCHHHHHHHHHHHH
Q 002039 204 NTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ----SSETVLILEFMDGIRLNDCESLEA-FGVNKQKVVEEITRAY 278 (977)
Q Consensus 204 n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~----~~~~vLVmE~i~G~~L~~~~~~~~-~~~~~~~l~~~l~~~~ 278 (977)
.+.++.+ ..+++++. ....++||||++|.+|.+...... ..++...+...+.+++
T Consensus 54 ~l~~l~h--------------------~~i~~~~~~~~~~~~~~~v~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~i~ 113 (261)
T cd05034 54 IMKKLRH--------------------DKLVQLYAVCSEEEPIYIVTEYMSKGSLLDFLKSGEGKKLRLPQLVDMAAQIA 113 (261)
T ss_pred HHhhCCC--------------------CCEeeeeeeeecCCceEEEEeccCCCCHHHHHhccccCCCCHHHHHHHHHHHH
Confidence 4444321 12333332 356789999999999877643211 1244444444444433
Q ss_pred --HHHHHhcCccccCCCCCCeEEccCCCCceEEEecccccccCH
Q 002039 279 --AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 320 (977)
Q Consensus 279 --l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 320 (977)
+..+|..|++|+|+||.||+++.+ +.++|+|||.+..+..
T Consensus 114 ~al~~lh~~~i~h~di~p~nili~~~--~~~~l~d~g~~~~~~~ 155 (261)
T cd05034 114 EGMAYLESRNYIHRDLAARNILVGEN--LVCKIADFGLARLIED 155 (261)
T ss_pred HHHHHHHhCCcccCCcchheEEEcCC--CCEEECccccceeccc
Confidence 678899999999999999999865 8999999999887754
No 175
>PHA03212 serine/threonine kinase US3; Provisional
Probab=99.16 E-value=1.4e-10 Score=134.26 Aligned_cols=131 Identities=13% Similarity=0.080 Sum_probs=86.9
Q ss_pred cccccccccEEEEEEe-cCCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCcHHHH
Q 002039 124 TPLATASIAQVHRATL-VDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (977)
Q Consensus 124 ~piasaSigqV~~A~l-~~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea 202 (977)
+.||.|++|.||+|+. ++++.||||+... . .+.+|+
T Consensus 98 ~~lg~G~~g~V~~~~d~~~~~~vaiK~~~~---~----------------------------------------~~~~E~ 134 (391)
T PHA03212 98 ETFTPGAEGFAFACIDNKTCEHVVIKAGQR---G----------------------------------------GTATEA 134 (391)
T ss_pred EEEcCCCCeEEEEEEECCCCCEEEEechhh---h----------------------------------------hhHHHH
Confidence 5699999999999997 4799999995321 0 123455
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeee-cCCceEEeeccCCCCCCChHHHHhcCCCHHHHHHHHHHHH--H
Q 002039 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--A 279 (977)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~--l 279 (977)
+.+.++.+ ..-+.+-..+. ....++|||++.| .|.+... ....+....+...+.+++ +
T Consensus 135 ~il~~l~H-----------------pnIv~~~~~~~~~~~~~lv~e~~~~-~L~~~l~-~~~~l~~~~~~~i~~qi~~aL 195 (391)
T PHA03212 135 HILRAINH-----------------PSIIQLKGTFTYNKFTCLILPRYKT-DLYCYLA-AKRNIAICDILAIERSVLRAI 195 (391)
T ss_pred HHHHhCCC-----------------CCCCCEeEEEEECCeeEEEEecCCC-CHHHHHH-hcCCCCHHHHHHHHHHHHHHH
Confidence 55544432 01122222222 4556899999965 4433321 223445555555444444 7
Q ss_pred HHHHhcCccccCCCCCCeEEccCCCCceEEEeccccccc
Q 002039 280 HQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKL 318 (977)
Q Consensus 280 ~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l 318 (977)
..+|..|++|||+||+|||++.+ +.++|+|||++...
T Consensus 196 ~ylH~~~IvHrDiKP~NIll~~~--~~vkL~DFG~a~~~ 232 (391)
T PHA03212 196 QYLHENRIIHRDIKAENIFINHP--GDVCLGDFGAACFP 232 (391)
T ss_pred HHHHhCCcccCCCChHhEEEcCC--CCEEEEeCCccccc
Confidence 88999999999999999999865 88999999998643
No 176
>cd05609 STKc_MAST Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine kinase. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. There are four mammalian MAST kinases, named MAST1-MAST4. MAST1 is also referred to as syntrophin-associated STK (SAST), while MAST2 is also called MAST205. MAST kinases are cytoskeletal associated kinases of unknown function that a
Probab=99.16 E-value=1.5e-10 Score=129.13 Aligned_cols=137 Identities=12% Similarity=0.122 Sum_probs=89.2
Q ss_pred cccccccccEEEEEEec-CCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCcHHHH
Q 002039 124 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (977)
Q Consensus 124 ~piasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea 202 (977)
+.++.|++|.||+|+.+ +++.|+||...++.... .... -++.+|.
T Consensus 7 ~~l~~g~~~~v~~~~~~~~~~~v~ik~~~~~~~~~-~~~~---------------------------------~~~~~e~ 52 (305)
T cd05609 7 KLISNGAYGAVYLVRHKETRQRFAMKKINKQNLIL-RNQI---------------------------------QQVFVER 52 (305)
T ss_pred eEeecCCCeeEEEEEECCCCcEEEEEEeehhhhhh-HHHH---------------------------------HHHHHHH
Confidence 67999999999999975 68999999765431100 0000 0123344
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeee----cCCceEEeeccCCCCCCChHHHHhcCCCHHHHHHHHHHHH
Q 002039 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ----SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY 278 (977)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~----~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~ 278 (977)
+.+..++ + ..|++++. ....+|||||++|.+|.++.... ..+....+...+.+++
T Consensus 53 ~~l~~~~------------------~--~~i~~~~~~~~~~~~~~lv~e~~~g~~L~~~l~~~-~~~~~~~~~~~~~~i~ 111 (305)
T cd05609 53 DILTFAE------------------N--PFVVSMFCSFETKRHLCMVMEYVEGGDCATLLKNI-GALPVDMARMYFAETV 111 (305)
T ss_pred HHHHhCC------------------C--CCeeeeEEEEecCCEEEEEEecCCCCcHHHHHHHc-CCCCHHHHHHHHHHHH
Confidence 3333321 1 13334443 23458999999999998774322 2233333333333333
Q ss_pred --HHHHHhcCccccCCCCCCeEEccCCCCceEEEecccccc
Q 002039 279 --AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKK 317 (977)
Q Consensus 279 --l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~ 317 (977)
+..+|..|++|+|+||+||+++.+ +.++|+|||+++.
T Consensus 112 ~~l~~lH~~~i~H~dl~p~NIll~~~--~~~~l~dfg~~~~ 150 (305)
T cd05609 112 LALEYLHNYGIVHRDLKPDNLLITSM--GHIKLTDFGLSKI 150 (305)
T ss_pred HHHHHHHHCCccccCCchHHEEECCC--CCEEEeeCCCccc
Confidence 788999999999999999999865 8999999998763
No 177
>cd05063 PTKc_EphR_A2 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored
Probab=99.16 E-value=1.6e-10 Score=126.05 Aligned_cols=143 Identities=20% Similarity=0.241 Sum_probs=94.1
Q ss_pred ccccccccccEEEEEEec-CCC---EEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCc
Q 002039 123 ETPLATASIAQVHRATLV-DGR---QVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDF 198 (977)
Q Consensus 123 ~~piasaSigqV~~A~l~-~G~---~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~ 198 (977)
.+.||.|++|+||+|+++ +++ .|+||..+++....... ++
T Consensus 10 ~~~lg~g~~g~vy~~~~~~~~~~~~~~~ik~~~~~~~~~~~~------------------------------------~~ 53 (268)
T cd05063 10 QKVIGAGEFGEVFRGILKMPGRKEVAVAIKTLKPGYTEKQRQ------------------------------------DF 53 (268)
T ss_pred eeEecCCCCccEEEEEEecCCCCceEEEEEeccccCCHHHHH------------------------------------HH
Confidence 467999999999999975 443 79999876543211000 23
Q ss_pred HHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeee-cCCceEEeeccCCCCCCChHHHHhcCCCHHHHHHHHHHH
Q 002039 199 NSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRA 277 (977)
Q Consensus 199 ~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~ 277 (977)
.+|++.+.++.+ ..-+.+...+. ....++||||++|.+|.+.........+...+...+.++
T Consensus 54 ~~e~~~l~~l~h-----------------~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l 116 (268)
T cd05063 54 LSEASIMGQFSH-----------------HNIIRLEGVVTKFKPAMIITEYMENGALDKYLRDHDGEFSSYQLVGMLRGI 116 (268)
T ss_pred HHHHHHHhcCCC-----------------CCeeEEEEEEccCCCcEEEEEcCCCCCHHHHHHhcCCCCCHHHHHHHHHHH
Confidence 344443333321 11122222222 455689999999999987643222234455555444443
Q ss_pred H--HHHHHhcCccccCCCCCCeEEccCCCCceEEEecccccccCH
Q 002039 278 Y--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 320 (977)
Q Consensus 278 ~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 320 (977)
. +..+|..|++|+|+||.||+++.+ +.++|+|||++..+..
T Consensus 117 ~~al~~lH~~~i~H~dlkp~Nili~~~--~~~kl~dfg~~~~~~~ 159 (268)
T cd05063 117 AAGMKYLSDMNYVHRDLAARNILVNSN--LECKVSDFGLSRVLED 159 (268)
T ss_pred HHHHHHHHHCCeeccccchhhEEEcCC--CcEEECCCccceeccc
Confidence 3 788899999999999999999865 8899999999877654
No 178
>cd07880 STKc_p38gamma_MAPK12 Catalytic domain of the Serine/Threonine Kinase, p38gamma Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38gamma subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38gamma subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38gamma, also called MAPK12
Probab=99.16 E-value=1.3e-10 Score=132.17 Aligned_cols=157 Identities=17% Similarity=0.235 Sum_probs=98.8
Q ss_pred HHHHhCCChhhcccccC-ccccccccccEEEEEEe-cCCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCch
Q 002039 106 IEREFGESMGGMFMDFV-ETPLATASIAQVHRATL-VDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNP 183 (977)
Q Consensus 106 l~~elg~~~~~~f~~~d-~~piasaSigqV~~A~l-~~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~ 183 (977)
+++|.+..+.++...+. .+.||.|++|.||+|+. .+|+.||||+.+.......
T Consensus 2 ~~~~~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~------------------------- 56 (343)
T cd07880 2 YRQEVNKTIWEVPDRYRDLKQVGSGAYGTVCSALDRRTGAKVAIKKLYRPFQSEL------------------------- 56 (343)
T ss_pred hhhhhhhhhhccccceEEEEEeeecCCeEEEEEEECCCCcEEEEEEecccccchH-------------------------
Confidence 34555555555544443 36899999999999986 4899999998653211100
Q ss_pred hHHHHhhhcccccCcHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeee-------cCCceEEeeccCCCCCCC
Q 002039 184 IIDEWCKEAPKELDFNSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-------SSETVLILEFMDGIRLND 256 (977)
Q Consensus 184 ~~~e~~~~l~~Eld~~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-------~~~~vLVmE~i~G~~L~~ 256 (977)
.. -.+.+|+..+.++.+. .-+.+..++. ....+|||||+ |.+|.+
T Consensus 57 ----~~------~~~~~E~~~l~~l~h~-----------------~iv~~~~~~~~~~~~~~~~~~~lv~e~~-~~~l~~ 108 (343)
T cd07880 57 ----FA------KRAYRELRLLKHMKHE-----------------NVIGLLDVFTPDLSLDRFHDFYLVMPFM-GTDLGK 108 (343)
T ss_pred ----HH------HHHHHHHHHHHhcCCC-----------------CccceeeeecCCccccccceEEEEEecC-CCCHHH
Confidence 00 0123344444444220 0111222221 23458999999 667765
Q ss_pred hHHHHhcCCCHHHHHHHHHHHH--HHHHHhcCccccCCCCCCeEEccCCCCceEEEecccccccC
Q 002039 257 CESLEAFGVNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 319 (977)
Q Consensus 257 ~~~~~~~~~~~~~l~~~l~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~ 319 (977)
+. ....++...+...+.+++ +..+|..|++|+|+||.||+++.+ +.++|+|||++..+.
T Consensus 109 ~~--~~~~l~~~~~~~i~~qi~~al~~LH~~gi~H~dlkp~Nill~~~--~~~kl~dfg~~~~~~ 169 (343)
T cd07880 109 LM--KHEKLSEDRIQFLVYQMLKGLKYIHAAGIIHRDLKPGNLAVNED--CELKILDFGLARQTD 169 (343)
T ss_pred HH--hcCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCC--CCEEEeecccccccc
Confidence 53 223455555544444443 788999999999999999999865 889999999987654
No 179
>cd07873 STKc_PCTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may pl
Probab=99.16 E-value=9.8e-11 Score=130.36 Aligned_cols=139 Identities=17% Similarity=0.154 Sum_probs=89.8
Q ss_pred cccccccccEEEEEEec-CCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCcHHHH
Q 002039 124 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (977)
Q Consensus 124 ~piasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea 202 (977)
+.||.|++|.||+|+.+ +++.||+|..+....... ...+.+|.
T Consensus 12 ~~lg~g~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~------------------------------------~~~~~~E~ 55 (301)
T cd07873 12 DKLGEGTYATVYKGRSKLTDNLVALKEIRLEHEEGA------------------------------------PCTAIREV 55 (301)
T ss_pred eEeccCcCEEEEEEEEcCCCcEEEEEEEecccccCc------------------------------------hhHHHHHH
Confidence 67999999999999975 789999998754321110 00123344
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeee-cCCceEEeeccCCCCCCChHHHHhcCCCHHHHHHHHHHHH--H
Q 002039 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--A 279 (977)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~--l 279 (977)
..+.++.+ ..-+.+-..+. ....++||||++| +|.+........++...+...+.+++ +
T Consensus 56 ~~l~~l~h-----------------~nI~~~~~~~~~~~~~~lv~e~~~~-~l~~~l~~~~~~~~~~~~~~~~~qi~~aL 117 (301)
T cd07873 56 SLLKDLKH-----------------ANIVTLHDIIHTEKSLTLVFEYLDK-DLKQYLDDCGNSINMHNVKLFLFQLLRGL 117 (301)
T ss_pred HHHHhcCC-----------------CCcceEEEEEecCCeEEEEEecccc-CHHHHHHhcCCCCCHHHHHHHHHHHHHHH
Confidence 44444322 01122222222 4556899999986 55443222222345555554444443 7
Q ss_pred HHHHhcCccccCCCCCCeEEccCCCCceEEEeccccccc
Q 002039 280 HQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKL 318 (977)
Q Consensus 280 ~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l 318 (977)
..+|..|++|+|+||+||+++.+ +.++|+|||++...
T Consensus 118 ~~lH~~~i~H~dlkp~Nil~~~~--~~~kl~dfg~~~~~ 154 (301)
T cd07873 118 NYCHRRKVLHRDLKPQNLLINER--GELKLADFGLARAK 154 (301)
T ss_pred HHHHhCCeeCCCCCHHHEEECCC--CcEEECcCcchhcc
Confidence 88999999999999999999865 89999999998654
No 180
>cd06631 STKc_YSK4 Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4. Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals.
Probab=99.15 E-value=1.8e-10 Score=125.49 Aligned_cols=144 Identities=13% Similarity=0.126 Sum_probs=93.3
Q ss_pred cccccccccEEEEEEecCCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCcHHHHH
Q 002039 124 TPLATASIAQVHRATLVDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEAE 203 (977)
Q Consensus 124 ~piasaSigqV~~A~l~~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea~ 203 (977)
+.||.|++|+||+|...+|+.||||+.+.........+ +. .-.+.+|+.
T Consensus 6 ~~ig~g~~~~v~~~~~~~~~~~avk~~~~~~~~~~~~~------------------------~~-------~~~~~~e~~ 54 (265)
T cd06631 6 EVLGKGAYGTVYCGLTNQGQLIAVKQVELDTSNVLAAE------------------------KE-------YEKLQEEVD 54 (265)
T ss_pred ceEeccCCeEEEEEEEcCCCeEEEEEeecCccchhhHH------------------------HH-------HHHHHHHHH
Confidence 56899999999999988899999998754321110000 00 002344555
Q ss_pred HHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeee-cCCceEEeeccCCCCCCChHHHHhcCCCHHHHHHHHHHHH--HH
Q 002039 204 NTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--AH 280 (977)
Q Consensus 204 n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~--l~ 280 (977)
.+.++++ ..-+.+..... ....+++|||++|.+|.++... ........+...+.++. +.
T Consensus 55 ~l~~l~~-----------------~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~-~~~~~~~~~~~~~~qi~~~l~ 116 (265)
T cd06631 55 LLKSLKH-----------------VNIVQYLGTCLDDNTISIFMEFVPGGSISSILNR-FGPLPEPVFCKYTKQILDGVA 116 (265)
T ss_pred HHHhcCC-----------------CCEeeEeeEeecCCeEEEEEecCCCCcHHHHHHh-cCCCCHHHHHHHHHHHHHHHH
Confidence 5444432 01122222222 4556899999999999877432 12334444443333333 67
Q ss_pred HHHhcCccccCCCCCCeEEccCCCCceEEEeccccccc
Q 002039 281 QIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKL 318 (977)
Q Consensus 281 ~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l 318 (977)
.+|..|++|+|++|.||+++.+ +.++|+|||++..+
T Consensus 117 ~lH~~~i~H~dl~p~nil~~~~--~~~~l~dfg~~~~~ 152 (265)
T cd06631 117 YLHNNCVVHRDIKGNNVMLMPN--GIIKLIDFGCARRL 152 (265)
T ss_pred HHHhCCcccCCcCHHhEEECCC--CeEEeccchhhHhh
Confidence 8899999999999999999855 89999999988765
No 181
>PRK01723 3-deoxy-D-manno-octulosonic-acid kinase; Reviewed
Probab=99.15 E-value=4.2e-10 Score=121.07 Aligned_cols=146 Identities=14% Similarity=0.155 Sum_probs=94.1
Q ss_pred cccc-cccccEEEEEEecCCCEEEEEEec-CChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCcHHH
Q 002039 124 TPLA-TASIAQVHRATLVDGRQVVVKVQH-QGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSE 201 (977)
Q Consensus 124 ~pia-saSigqV~~A~l~~G~~VAVKv~~-p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~E 201 (977)
..+| .|+.|.||+... +|+.+|||..+ +++-..+..+- + .......-.+.+|
T Consensus 37 ~~lg~~~g~gtv~~v~~-~~~~~vlk~~~r~~~i~kv~~~~----------------~---------~~~~~~~~r~~rE 90 (239)
T PRK01723 37 RVVGSAKGRGTTWFVQT-PGVNWVLRHYRRGGLIGKLSKDR----------------Y---------LFTGLERTRAFAE 90 (239)
T ss_pred ceeecCCCCccEEEEEe-CCceEEEEEeeEcchHHhhhhhc----------------c---------cccchhhhHHHHH
Confidence 4576 899999999987 57899999763 44322211110 0 0000112245677
Q ss_pred HHHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeee-----cC---CceEEeeccCC-CCCCChHHHHhcCCCHHHHHH
Q 002039 202 AENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-----SS---ETVLILEFMDG-IRLNDCESLEAFGVNKQKVVE 272 (977)
Q Consensus 202 a~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-----~~---~~vLVmE~i~G-~~L~~~~~~~~~~~~~~~l~~ 272 (977)
.+.+.++.+ .++.+|+++. .. +.+||||+++| .+|.++. .....+. ....
T Consensus 91 ~~ll~~L~~------------------~gi~vP~pl~~~~~~~~~~~~~~lV~e~l~G~~~L~~~l--~~~~l~~-~~~~ 149 (239)
T PRK01723 91 FRLLAQLYE------------------AGLPVPRPIAARVVRHGLFYRADILIERIEGARDLVALL--QEAPLSE-EQWQ 149 (239)
T ss_pred HHHHHHHHh------------------CCCCCceeEeeeeeecCcceeeeEEEEecCCCCCHHHHH--hcCCCCH-HHHH
Confidence 788887764 2345566543 11 23599999998 5666552 2222333 2333
Q ss_pred HHHHHHHHHHHhcCccccCCCCCCeEEccCCCCceEEEecccccccC
Q 002039 273 EITRAYAHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 319 (977)
Q Consensus 273 ~l~~~~l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~ 319 (977)
.+.+ .+..+|..|++|+|+||+|||++.+ ++++|||||.+..-.
T Consensus 150 ~i~~-~l~~lH~~GI~HrDlkp~NILv~~~--~~v~LIDfg~~~~~~ 193 (239)
T PRK01723 150 AIGQ-LIARFHDAGVYHADLNAHNILLDPD--GKFWLIDFDRGELRT 193 (239)
T ss_pred HHHH-HHHHHHHCCCCCCCCCchhEEEcCC--CCEEEEECCCcccCC
Confidence 3333 4889999999999999999999865 789999999988765
No 182
>cd05037 PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases. Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; pseudokinase domain (repeat1). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the ki
Probab=99.15 E-value=1.2e-10 Score=126.08 Aligned_cols=81 Identities=17% Similarity=0.107 Sum_probs=60.6
Q ss_pred CCceEEeeccCCCCCCChHHHHhcCCCHHHHHHHHHHHH--HHHHHhcCccccCCCCCCeEEccCCC-----CceEEEec
Q 002039 240 SETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPP-----HRPILLDF 312 (977)
Q Consensus 240 ~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~-----g~i~LiDF 312 (977)
...++||||++|.+|.++.......++...+...+.++. +..+|..|++|+|+||.||+++.++. ..++|+||
T Consensus 73 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dlkp~Nill~~~~~~~~~~~~~kl~Df 152 (259)
T cd05037 73 DENIMVEEYVKFGPLDVFLHREKNNVSLHWKLDVAKQLASALHYLEDKKLVHGNVCGKNILVARYGLNEGYVPFIKLSDP 152 (259)
T ss_pred CCcEEEEEcCCCCcHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHhhCCeecccCccceEEEecCccccCCceeEEeCCC
Confidence 567999999999999877543332455555555444444 78899999999999999999986521 16999999
Q ss_pred ccccccCH
Q 002039 313 GLTKKLSS 320 (977)
Q Consensus 313 G~~~~l~~ 320 (977)
|++..+..
T Consensus 153 g~a~~~~~ 160 (259)
T cd05037 153 GIPITVLS 160 (259)
T ss_pred Cccccccc
Confidence 99887543
No 183
>PHA03211 serine/threonine kinase US3; Provisional
Probab=99.15 E-value=1e-10 Score=137.75 Aligned_cols=134 Identities=20% Similarity=0.119 Sum_probs=90.2
Q ss_pred ccccccccccEEEEEEec-CCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCcHHH
Q 002039 123 ETPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSE 201 (977)
Q Consensus 123 ~~piasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~E 201 (977)
...||.|++|.||+|+.. +++.||||..... .+.+|
T Consensus 174 ~~~Lg~G~~G~Vy~a~~~~~~~~vavK~~~~~-------------------------------------------~~~~E 210 (461)
T PHA03211 174 HRALTPGSEGCVFESSHPDYPQRVVVKAGWYA-------------------------------------------SSVHE 210 (461)
T ss_pred EEEEccCCCeEEEEEEECCCCCEEEEeccccc-------------------------------------------CHHHH
Confidence 367999999999999974 6899999942110 12345
Q ss_pred HHHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeee-cCCceEEeeccCCCCCCChHHHHhcCCCHHHHHHHHHHHH--
Q 002039 202 AENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY-- 278 (977)
Q Consensus 202 a~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~-- 278 (977)
++.+.++.+ ...+.+-.++. ....+||||++.| .|.+........++...+...+.++.
T Consensus 211 ~~iL~~L~H-----------------pnIv~l~~~~~~~~~~~lv~e~~~~-~L~~~l~~~~~~l~~~~~~~i~~qi~~a 272 (461)
T PHA03211 211 ARLLRRLSH-----------------PAVLALLDVRVVGGLTCLVLPKYRS-DLYTYLGARLRPLGLAQVTAVARQLLSA 272 (461)
T ss_pred HHHHHHCCC-----------------CCCCcEEEEEEECCEEEEEEEccCC-CHHHHHHhcCCCCCHHHHHHHHHHHHHH
Confidence 555555432 01122222222 4567899999975 44443221222356666666555554
Q ss_pred HHHHHhcCccccCCCCCCeEEccCCCCceEEEecccccccC
Q 002039 279 AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 319 (977)
Q Consensus 279 l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~ 319 (977)
+..+|..|++|+|+||.|||++.+ +.++|+|||+++.+.
T Consensus 273 L~yLH~~gIvHrDLKP~NILl~~~--~~vkL~DFGla~~~~ 311 (461)
T PHA03211 273 IDYIHGEGIIHRDIKTENVLVNGP--EDICLGDFGAACFAR 311 (461)
T ss_pred HHHHHHCCEEECcCCHHHEEECCC--CCEEEcccCCceecc
Confidence 788999999999999999999855 889999999987654
No 184
>KOG0610 consensus Putative serine/threonine protein kinase [General function prediction only]
Probab=99.15 E-value=1.3e-10 Score=127.49 Aligned_cols=139 Identities=18% Similarity=0.214 Sum_probs=89.5
Q ss_pred cccccccccEEEEEEec-CCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCcHHHH
Q 002039 124 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (977)
Q Consensus 124 ~piasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea 202 (977)
+-+|.|.+|.||.++++ ++...|+||+....-.. . +++.+ ...|.
T Consensus 83 k~LG~GdiG~VyL~~l~~t~~~fAmKVmdK~~l~~---r----kKl~R---------------------------a~tE~ 128 (459)
T KOG0610|consen 83 KRLGCGDIGTVYLVELRGTNCLFAMKVMDKESLAS---R----KKLKR---------------------------AQTER 128 (459)
T ss_pred HHcCCCCceeEEEEEecCCCceEEEEEecHHHHhh---h----hHHHH---------------------------HHHHH
Confidence 67999999999999996 46889999974321100 0 00100 01122
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeee--cCC--ceEEeeccCCCCCCChHHHHhcC-CCHHHHHHHHHH-
Q 002039 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ--SSE--TVLILEFMDGIRLNDCESLEAFG-VNKQKVVEEITR- 276 (977)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~--~~~--~vLVmE~i~G~~L~~~~~~~~~~-~~~~~l~~~l~~- 276 (977)
.-+..+ ....+|.+|. .++ -+||||||+|+.|..+.+.+... +....+--...+
T Consensus 129 eIL~~l--------------------DHPFlPTLYa~fet~~~~cl~meyCpGGdL~~LrqkQp~~~fse~~aRFYaAEv 188 (459)
T KOG0610|consen 129 EILSLL--------------------DHPFLPTLYASFETDKYSCLVMEYCPGGDLHSLRQKQPGKRFSESAARFYAAEV 188 (459)
T ss_pred HHHHhc--------------------CCCccchhhheeeccceeEEEEecCCCccHHHHHhhCCCCccchhhHHHHHHHH
Confidence 222222 2345777775 333 47999999999987653322111 222222222222
Q ss_pred -HHHHHHHhcCccccCCCCCCeEEccCCCCceEEEeccccccc
Q 002039 277 -AYAHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKL 318 (977)
Q Consensus 277 -~~l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l 318 (977)
+.++.+|-.|||-||+||+||||.++ |.|.|.||-++.+.
T Consensus 189 l~ALEYLHmlGivYRDLKPENILvred--GHIMLsDFDLS~~~ 229 (459)
T KOG0610|consen 189 LLALEYLHMLGIVYRDLKPENILVRED--GHIMLSDFDLSLRC 229 (459)
T ss_pred HHHHHHHHhhceeeccCCcceeEEecC--CcEEeeeccccccC
Confidence 23888999999999999999999976 99999999987665
No 185
>cd05103 PTKc_VEGFR2 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 2. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 2 (VEGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR2 (or Flk1) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. The carboxyl terminus of VEGFR2 plays an important role in its autophosp
Probab=99.15 E-value=1.5e-10 Score=131.64 Aligned_cols=39 Identities=21% Similarity=0.313 Sum_probs=34.8
Q ss_pred HHHHHhcCccccCCCCCCeEEccCCCCceEEEecccccccC
Q 002039 279 AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 319 (977)
Q Consensus 279 l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~ 319 (977)
+..+|..|++|+|+||.||+++.+ +.++|+|||++..+.
T Consensus 192 l~~lH~~~i~H~dikp~Nil~~~~--~~~kl~dfg~~~~~~ 230 (343)
T cd05103 192 MEFLASRKCIHRDLAARNILLSEN--NVVKICDFGLARDIY 230 (343)
T ss_pred HHHHHhCCeecCCCccCeEEEcCC--CcEEEEecccccccc
Confidence 678899999999999999999865 899999999987653
No 186
>cd05072 PTKc_Lyn Catalytic domain of the Protein Tyrosine Kinase, Lyn. Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth fa
Probab=99.15 E-value=2e-10 Score=124.69 Aligned_cols=139 Identities=20% Similarity=0.229 Sum_probs=94.1
Q ss_pred cccccccccEEEEEEecCCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCcHHHHH
Q 002039 124 TPLATASIAQVHRATLVDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEAE 203 (977)
Q Consensus 124 ~piasaSigqV~~A~l~~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea~ 203 (977)
+.||.|++|.||+|...+++.||||...+.-.. . + .+.+|..
T Consensus 12 ~~lg~g~~g~v~~~~~~~~~~v~iK~~~~~~~~-----~-----------------------~----------~~~~e~~ 53 (261)
T cd05072 12 KKLGAGQFGEVWMGYYNNSTKVAVKTLKPGTMS-----V-----------------------Q----------AFLEEAN 53 (261)
T ss_pred eecCCcCCceEEEEEecCCceEEEEEccCCchh-----H-----------------------H----------HHHHHHH
Confidence 579999999999999888899999986653210 0 0 1334544
Q ss_pred HHHHHHHHhCCCCCCCCCCCCCCCCCC-eEeceeee-cCCceEEeeccCCCCCCChHHHHh-cCCCHHHHHHHHHHHH--
Q 002039 204 NTRIVSANLGCKNKHEDSNKKPAYEVD-VLIPEVIQ-SSETVLILEFMDGIRLNDCESLEA-FGVNKQKVVEEITRAY-- 278 (977)
Q Consensus 204 n~~~~~~~~~~~~~~~~~~~~~~~~~~-v~vP~v~~-~~~~vLVmE~i~G~~L~~~~~~~~-~~~~~~~l~~~l~~~~-- 278 (977)
.+.++.+ +. +.+-..+. ....+|+|||++|.+|.++..... .......+...+.++.
T Consensus 54 ~l~~l~h------------------~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~l~~~ 115 (261)
T cd05072 54 LMKTLQH------------------DKLVRLYAVVTKEEPIYIITEYMAKGSLLDFLKSDEGGKVLLPKLIDFSAQIAEG 115 (261)
T ss_pred HHHhCCC------------------CCeeeEEEEEcCCCCcEEEEecCCCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHH
Confidence 4444321 11 11111222 455689999999999987643221 2234444444444443
Q ss_pred HHHHHhcCccccCCCCCCeEEccCCCCceEEEecccccccCH
Q 002039 279 AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 320 (977)
Q Consensus 279 l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 320 (977)
+..+|..|++|+|++|.||+++.+ +.++|.|||.+..+..
T Consensus 116 l~~LH~~~i~H~dl~p~nili~~~--~~~~l~dfg~~~~~~~ 155 (261)
T cd05072 116 MAYIERKNYIHRDLRAANVLVSES--LMCKIADFGLARVIED 155 (261)
T ss_pred HHHHHHCCeeccccchhhEEecCC--CcEEECCCccceecCC
Confidence 778899999999999999999865 8899999999987653
No 187
>cd05082 PTKc_Csk Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase. Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, re
Probab=99.15 E-value=1.6e-10 Score=125.14 Aligned_cols=137 Identities=21% Similarity=0.214 Sum_probs=91.4
Q ss_pred cccccccccEEEEEEecCCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCcHHHHH
Q 002039 124 TPLATASIAQVHRATLVDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEAE 203 (977)
Q Consensus 124 ~piasaSigqV~~A~l~~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea~ 203 (977)
+.||.|++|.||+|.. .|+.||+|..+.+... -+|.+|+.
T Consensus 12 ~~lg~g~~~~v~~~~~-~~~~~~~k~~~~~~~~---------------------------------------~~~~~e~~ 51 (256)
T cd05082 12 QTIGKGEFGDVMLGDY-RGNKVAVKCIKNDATA---------------------------------------QAFLAEAS 51 (256)
T ss_pred eeecccCCCeEEEEEE-cCCcEEEEEeCCCchH---------------------------------------HHHHHHHH
Confidence 5699999999999986 5889999976432110 02344555
Q ss_pred HHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeee--cCCceEEeeccCCCCCCChHHHHhc-CCCHHHHHHHHHHHH--
Q 002039 204 NTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ--SSETVLILEFMDGIRLNDCESLEAF-GVNKQKVVEEITRAY-- 278 (977)
Q Consensus 204 n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~--~~~~vLVmE~i~G~~L~~~~~~~~~-~~~~~~l~~~l~~~~-- 278 (977)
.+.++.+ ...+.+...+. ....+++|||++|.+|.+....... ..+...+...+.++.
T Consensus 52 ~l~~l~~-----------------~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~ 114 (256)
T cd05082 52 VMTQLRH-----------------SNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEA 114 (256)
T ss_pred HHHhCCC-----------------CCeeeEEEEEEcCCCceEEEEECCCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHH
Confidence 5444422 11122222222 3456899999999999876432211 134444444444443
Q ss_pred HHHHHhcCccccCCCCCCeEEccCCCCceEEEecccccccC
Q 002039 279 AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 319 (977)
Q Consensus 279 l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~ 319 (977)
+..+|..|++|+|++|+||+++.+ +.++|+|||++....
T Consensus 115 l~~lH~~~i~H~dlkp~nil~~~~--~~~kl~dfg~~~~~~ 153 (256)
T cd05082 115 MEYLEANNFVHRDLAARNVLVSED--NVAKVSDFGLTKEAS 153 (256)
T ss_pred HHHHHhCCEeccccchheEEEcCC--CcEEecCCccceecc
Confidence 788999999999999999999865 899999999987653
No 188
>PHA03209 serine/threonine kinase US3; Provisional
Probab=99.15 E-value=1.1e-10 Score=133.59 Aligned_cols=131 Identities=15% Similarity=0.130 Sum_probs=86.0
Q ss_pred cccccccccEEEEEEec-CCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCcHHHH
Q 002039 124 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (977)
Q Consensus 124 ~piasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea 202 (977)
+.||.|++|+||+|+.+ +++.||+|+...+. ...|+
T Consensus 72 ~~lg~G~~g~Vy~~~~~~~~~~valK~~~~~~-------------------------------------------~~~E~ 108 (357)
T PHA03209 72 KTLTPGSEGRVFVATKPGQPDPVVLKIGQKGT-------------------------------------------TLIEA 108 (357)
T ss_pred EEecCCCCeEEEEEEECCCCceEEEEeCCccc-------------------------------------------cHHHH
Confidence 67999999999999974 67899999753321 11233
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeee-cCCceEEeeccCCCCCCChHHHHhcCCCHHHHHHHHHHHH--H
Q 002039 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--A 279 (977)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~--l 279 (977)
..+.++.+ ...+.+-..+. ....++|||++.| .|.+........+....+...+.+++ +
T Consensus 109 ~~l~~l~h-----------------~~iv~~~~~~~~~~~~~lv~e~~~~-~l~~~l~~~~~~~~~~~~~~i~~qi~~aL 170 (357)
T PHA03209 109 MLLQNVNH-----------------PSVIRMKDTLVSGAITCMVLPHYSS-DLYTYLTKRSRPLPIDQALIIEKQILEGL 170 (357)
T ss_pred HHHHhCCC-----------------CCCcChhheEEeCCeeEEEEEccCC-cHHHHHHhccCCCCHHHHHHHHHHHHHHH
Confidence 33333221 00111112222 3456899999976 44444322233455555555544444 7
Q ss_pred HHHHhcCccccCCCCCCeEEccCCCCceEEEecccccc
Q 002039 280 HQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKK 317 (977)
Q Consensus 280 ~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~ 317 (977)
..+|..|++|||+||.|||++.+ +.++|+|||++..
T Consensus 171 ~~LH~~~ivHrDlkp~Nill~~~--~~~kl~DfG~a~~ 206 (357)
T PHA03209 171 RYLHAQRIIHRDVKTENIFINDV--DQVCIGDLGAAQF 206 (357)
T ss_pred HHHHHCCeecCCCCHHHEEECCC--CCEEEecCccccc
Confidence 88999999999999999999865 8899999999864
No 189
>KOG0611 consensus Predicted serine/threonine protein kinase [General function prediction only]
Probab=99.15 E-value=6.8e-11 Score=128.13 Aligned_cols=141 Identities=21% Similarity=0.280 Sum_probs=94.1
Q ss_pred cccccccccEEEEEEe-cCCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCcHHHH
Q 002039 124 TPLATASIAQVHRATL-VDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (977)
Q Consensus 124 ~piasaSigqV~~A~l-~~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea 202 (977)
+-+|+|.+|.|-+|+. +.|+.||||.++.+--+ -..|+- ..++|.
T Consensus 59 etLGkGTYGKVk~A~e~~sgR~VAiKsIrKdkIk-deqDlv---------------------------------hIRREI 104 (668)
T KOG0611|consen 59 ETLGKGTYGKVKLAYEHKSGREVAIKSIRKDKIK-DEQDLV---------------------------------HIRREI 104 (668)
T ss_pred HHhcCCcccceeehhhccCCcEeehhhhhhhhcc-cHHHHH---------------------------------HHHHHH
Confidence 5689999999999996 68999999976543110 011221 123344
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeee-cCCceEEeeccCCCCCCChHHHHhcCCCH---HHHHHHHHHHH
Q 002039 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAFGVNK---QKVVEEITRAY 278 (977)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLVmE~i~G~~L~~~~~~~~~~~~~---~~l~~~l~~~~ 278 (977)
+-+..+.+ ...+.|-+|+. ..+-||||||..|+.|.|+...+. .+.. ..+.+.++.+
T Consensus 105 eIMSsLNH-----------------PhII~IyEVFENkdKIvivMEYaS~GeLYDYiSer~-~LsErEaRhfFRQIvSA- 165 (668)
T KOG0611|consen 105 EIMSSLNH-----------------PHIIQIYEVFENKDKIVIVMEYASGGELYDYISERG-SLSEREARHFFRQIVSA- 165 (668)
T ss_pred HHHhhcCC-----------------CceeehhhhhcCCceEEEEEEecCCccHHHHHHHhc-cccHHHHHHHHHHHHHH-
Confidence 43333321 12344555665 567799999999999999865322 2222 2233333333
Q ss_pred HHHHHhcCccccCCCCCCeEEccCCCCceEEEecccccccC
Q 002039 279 AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 319 (977)
Q Consensus 279 l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~ 319 (977)
....|.++++|||+|-.|||++.+ +.++|.|||+.-.+.
T Consensus 166 VhYCHknrVvHRDLKLENILLD~N--~NiKIADFGLSNly~ 204 (668)
T KOG0611|consen 166 VHYCHKNRVVHRDLKLENILLDQN--NNIKIADFGLSNLYA 204 (668)
T ss_pred HHHHhhccceecccchhheeecCC--CCeeeeccchhhhhc
Confidence 556789999999999999999965 899999999987653
No 190
>cd05066 PTKc_EphR_A Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellul
Probab=99.15 E-value=1.7e-10 Score=125.87 Aligned_cols=142 Identities=18% Similarity=0.190 Sum_probs=94.2
Q ss_pred cccccccccEEEEEEec-C---CCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCcH
Q 002039 124 TPLATASIAQVHRATLV-D---GRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFN 199 (977)
Q Consensus 124 ~piasaSigqV~~A~l~-~---G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~ 199 (977)
+.||+|.+|.||+|+.+ + +..||||..++....... -+|.
T Consensus 10 ~~lg~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~~~~~~------------------------------------~~~~ 53 (267)
T cd05066 10 KVIGAGEFGEVCSGRLKLPGKREIPVAIKTLKAGYTEKQR------------------------------------RDFL 53 (267)
T ss_pred eeecccCCCceEEEEEecCCCCceEEEEEECCCCCCHHHH------------------------------------HHHH
Confidence 67899999999999874 3 337999987654321100 0233
Q ss_pred HHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeee-cCCceEEeeccCCCCCCChHHHHhcCCCHHHHHHHHHHHH
Q 002039 200 SEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY 278 (977)
Q Consensus 200 ~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~ 278 (977)
+|...+.++.+ ..-+.+...+. ....++||||++|.+|.++........+...+...+.++.
T Consensus 54 ~e~~~l~~l~h-----------------~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~i~~~i~ 116 (267)
T cd05066 54 SEASIMGQFDH-----------------PNIIHLEGVVTKSKPVMIVTEYMENGSLDAFLRKHDGQFTVIQLVGMLRGIA 116 (267)
T ss_pred HHHHHHHhCCC-----------------CCcceEEEEEecCCccEEEEEcCCCCCHHHHHHhcCCCCCHHHHHHHHHHHH
Confidence 45444444321 11223333332 4557899999999999877543222345555555444433
Q ss_pred --HHHHHhcCccccCCCCCCeEEccCCCCceEEEecccccccCH
Q 002039 279 --AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 320 (977)
Q Consensus 279 --l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 320 (977)
+..+|..|++|+|+||.||+++.+ +.++|+|||++..+..
T Consensus 117 ~~l~~lH~~~i~h~dlkp~nili~~~--~~~~l~dfg~~~~~~~ 158 (267)
T cd05066 117 SGMKYLSDMGYVHRDLAARNILVNSN--LVCKVSDFGLSRVLED 158 (267)
T ss_pred HHHHHHHHCCEeehhhchhcEEECCC--CeEEeCCCCccccccc
Confidence 678899999999999999999865 8899999999887653
No 191
>cd05630 STKc_GRK6 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as
Probab=99.15 E-value=1.7e-10 Score=127.47 Aligned_cols=143 Identities=15% Similarity=0.128 Sum_probs=92.7
Q ss_pred cccccccccEEEEEEec-CCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCcHHHH
Q 002039 124 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (977)
Q Consensus 124 ~piasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea 202 (977)
+.||.|++|+||+|..+ +|+.||||...+....... .+-.+.+|.
T Consensus 6 ~~ig~G~~g~v~~~~~~~~~~~~avK~~~~~~~~~~~----------------------------------~~~~~~~E~ 51 (285)
T cd05630 6 RVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRK----------------------------------GESMALNEK 51 (285)
T ss_pred EEeecCCCeEEEEEEEcCCCceEEEEEEehhhccchH----------------------------------HHHHHHHHH
Confidence 56999999999999974 7999999976543211000 000122344
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeee-cCCceEEeeccCCCCCCChHHHH-hcCCCHHHHHHHHHHHH--
Q 002039 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLE-AFGVNKQKVVEEITRAY-- 278 (977)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLVmE~i~G~~L~~~~~~~-~~~~~~~~l~~~l~~~~-- 278 (977)
..+.++.+ ...+.+...+. ....++||||++|.+|.+..... ..+++...+...+.+++
T Consensus 52 ~il~~l~~-----------------~~i~~~~~~~~~~~~~~lv~e~~~g~~L~~~l~~~~~~~l~~~~~~~~~~qi~~~ 114 (285)
T cd05630 52 QILEKVNS-----------------RFVVSLAYAYETKDALCLVLTLMNGGDLKFHIYHMGEAGFEEGRAVFYAAEICCG 114 (285)
T ss_pred HHHHhCCC-----------------CCeeeeeEEEecCCEEEEEEEecCCCcHHHHHHHhcccCCCHHHHHHHHHHHHHH
Confidence 44433321 11122222222 34568999999999998764321 12355555555444444
Q ss_pred HHHHHhcCccccCCCCCCeEEccCCCCceEEEecccccccC
Q 002039 279 AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 319 (977)
Q Consensus 279 l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~ 319 (977)
+..+|..|++|+|+||.||+++.+ +.++|+|||++...+
T Consensus 115 l~~lH~~~iiH~dikp~Nil~~~~--~~~~l~Dfg~~~~~~ 153 (285)
T cd05630 115 LEDLHQERIVYRDLKPENILLDDH--GHIRISDLGLAVHVP 153 (285)
T ss_pred HHHHHhCCEEeCCCCHHHEEECCC--CCEEEeeccceeecC
Confidence 678899999999999999999865 889999999987654
No 192
>cd06625 STKc_MEKK3_like Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades t
Probab=99.15 E-value=2.2e-10 Score=124.46 Aligned_cols=144 Identities=15% Similarity=0.110 Sum_probs=92.6
Q ss_pred ccccccccccEEEEEEe-cCCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCcHHH
Q 002039 123 ETPLATASIAQVHRATL-VDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSE 201 (977)
Q Consensus 123 ~~piasaSigqV~~A~l-~~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~E 201 (977)
.+.||.|++|+||+|+. .+|++||||+.+........ . .+ -.++.+|
T Consensus 7 ~~~lg~g~~~~vy~~~~~~~~~~~~lk~~~~~~~~~~~--~-----------------------~~-------~~~~~~e 54 (263)
T cd06625 7 GKLLGQGAFGRVYLCYDVDTGRELAVKQVPFDPDSPET--K-----------------------KE-------VNALECE 54 (263)
T ss_pred cceecCCCceEEEEEEEcCCCcEEEEEEEeecccchhh--H-----------------------HH-------HHHHHHH
Confidence 46899999999999997 47999999987643211000 0 00 0023455
Q ss_pred HHHHHHHHHHhCCCCCCCCCCCCCCCCCC-eEeceeee-cCCceEEeeccCCCCCCChHHHHhcCCCHHHHHHHHHHHH-
Q 002039 202 AENTRIVSANLGCKNKHEDSNKKPAYEVD-VLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY- 278 (977)
Q Consensus 202 a~n~~~~~~~~~~~~~~~~~~~~~~~~~~-v~vP~v~~-~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~- 278 (977)
++.+.++.+ +. +.+...+. ....++||||++|.+|.+.... ...+....+...+.+++
T Consensus 55 ~~~l~~l~~------------------~~i~~~~~~~~~~~~~~~v~e~~~~~~l~~~~~~-~~~~~~~~~~~~~~~l~~ 115 (263)
T cd06625 55 IQLLKNLQH------------------ERIVQYYGCLRDDETLSIFMEYMPGGSVKDQLKA-YGALTETVTRKYTRQILE 115 (263)
T ss_pred HHHHHhCCC------------------CCeeeeEEEEccCCeEEEEEEECCCCcHHHHHHH-hCCCCHHHHHHHHHHHHH
Confidence 555444421 11 22222222 4566899999999998776432 12233333333333332
Q ss_pred -HHHHHhcCccccCCCCCCeEEccCCCCceEEEecccccccC
Q 002039 279 -AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 319 (977)
Q Consensus 279 -l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~ 319 (977)
+..+|..|++|+|+||+||+++.+ ++++|+|||++..+.
T Consensus 116 ~l~~lH~~~i~H~dl~p~nilv~~~--~~~~l~dfg~~~~~~ 155 (263)
T cd06625 116 GVEYLHSNMIVHRDIKGANILRDSA--GNVKLGDFGASKRLQ 155 (263)
T ss_pred HHHHHHhCCeecCCCCHHHEEEcCC--CCEEEeecccceecc
Confidence 678899999999999999999855 899999999987654
No 193
>KOG0587 consensus Traf2- and Nck-interacting kinase and related germinal center kinase (GCK) family protein kinases [Signal transduction mechanisms]
Probab=99.15 E-value=1.2e-10 Score=137.76 Aligned_cols=152 Identities=13% Similarity=0.173 Sum_probs=106.1
Q ss_pred CChhhcccccCccccccccccEEEEEEe-cCCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhh
Q 002039 112 ESMGGMFMDFVETPLATASIAQVHRATL-VDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCK 190 (977)
Q Consensus 112 ~~~~~~f~~~d~~piasaSigqV~~A~l-~~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~ 190 (977)
.+..+.|+-+ +-||.|.+|+||+++. ++|+.+||||+.|+....-..+++
T Consensus 15 pdp~d~~ei~--evig~Gtygkv~k~k~~~~~~~aa~kI~~~~~d~deEiE~e--------------------------- 65 (953)
T KOG0587|consen 15 PDPADIFEII--EVIGNGTYGKVYKGRHVKTGQLAAIKIMDPTEDEEEEIELE--------------------------- 65 (953)
T ss_pred CCCCCccEEE--EEEeeccceeEEEEeeeecCceeeeEeecCCccccHHHHHH---------------------------
Confidence 3455666554 3589999999999985 689999999999876532211111
Q ss_pred hcccccCcHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceee---e------cCCceEEeeccCCCCCCChHHHH
Q 002039 191 EAPKELDFNSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVI---Q------SSETVLILEFMDGIRLNDCESLE 261 (977)
Q Consensus 191 ~l~~Eld~~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~---~------~~~~vLVmE~i~G~~L~~~~~~~ 261 (977)
-|+.++.. +++. ++..| . ..+.+||||||.|+++.|+....
T Consensus 66 ------------ynil~~~~----------------~hpn--v~~fyg~~~k~~~~~~DqLWLVMEfC~gGSVTDLVKn~ 115 (953)
T KOG0587|consen 66 ------------YNMLKKYS----------------HHPN--VATFYGAFIKKDPGNGDQLWLVMEFCGGGSVTDLVKNT 115 (953)
T ss_pred ------------HHHHHhcc----------------CCCC--cceEEEEEEEecCCCCCeEEEEeeccCCccHHHHHhhh
Confidence 12222211 1111 22222 1 46679999999999999986532
Q ss_pred h-cCCCHHHHHHHHHHHH--HHHHHhcCccccCCCCCCeEEccCCCCceEEEecccccccCHHHHH
Q 002039 262 A-FGVNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSSSMKQ 324 (977)
Q Consensus 262 ~-~~~~~~~l~~~l~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~~~r~ 324 (977)
. ...+...++.++.+++ +.++|..-++|||+|-.|||++.+ +.++|+|||...+++....+
T Consensus 116 ~g~rl~E~~IaYI~re~lrgl~HLH~nkviHRDikG~NiLLT~e--~~VKLvDFGvSaQldsT~gr 179 (953)
T KOG0587|consen 116 KGNRLKEEWIAYILREILRGLAHLHNNKVIHRDIKGQNVLLTEN--AEVKLVDFGVSAQLDSTVGR 179 (953)
T ss_pred cccchhhHHHHHHHHHHHHHHHHHhhcceeeecccCceEEEecc--CcEEEeeeeeeeeeeccccc
Confidence 2 2234455677776666 677888999999999999999976 99999999999999876544
No 194
>cd05105 PTKc_PDGFR_alpha Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor alpha. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) alpha; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR alpha is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR alpha forms homodimers or heterodimers with PDGFR beta, depending on the nature of the PDGF ligand. PDGF-AA, PDGF-
Probab=99.14 E-value=2.3e-10 Score=132.75 Aligned_cols=39 Identities=18% Similarity=0.288 Sum_probs=34.9
Q ss_pred HHHHHhcCccccCCCCCCeEEccCCCCceEEEecccccccC
Q 002039 279 AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 319 (977)
Q Consensus 279 l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~ 319 (977)
+..+|..|++|+|+||.|||++.+ +.++|+|||++..+.
T Consensus 250 L~~LH~~~ivH~dikp~Nill~~~--~~~kL~DfGla~~~~ 288 (400)
T cd05105 250 MEFLASKNCVHRDLAARNVLLAQG--KIVKICDFGLARDIM 288 (400)
T ss_pred HHHHHhCCeeCCCCChHhEEEeCC--CEEEEEeCCcceecc
Confidence 778899999999999999999865 789999999987654
No 195
>cd06645 STKc_MAP4K3 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated
Probab=99.14 E-value=1.5e-10 Score=126.11 Aligned_cols=139 Identities=14% Similarity=0.129 Sum_probs=92.5
Q ss_pred cccccccccEEEEEEe-cCCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCcHHHH
Q 002039 124 TPLATASIAQVHRATL-VDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (977)
Q Consensus 124 ~piasaSigqV~~A~l-~~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea 202 (977)
+.||+|++|+||+|+. .+++.||||+.+....... . .+.+|.
T Consensus 15 ~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~----~---------------------------------~~~~e~ 57 (267)
T cd06645 15 QRIGSGTYGDVYKARNVNTGELAAIKVIKLEPGEDF----A---------------------------------VVQQEI 57 (267)
T ss_pred HHhCCCCCeEEEEEEEcCCCcEEEEEEEecCchhHH----H---------------------------------HHHHHH
Confidence 5789999999999987 4799999998765422110 0 112233
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeee-cCCceEEeeccCCCCCCChHHHHhcCCCHHHHHHHHHHHH--H
Q 002039 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--A 279 (977)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~--l 279 (977)
..+..+.+ ..-+.+-..+. ....++||||++|.+|.++... ....+...+...+.+++ +
T Consensus 58 ~~~~~l~h-----------------~~ii~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~-~~~~~~~~~~~~~~~i~~~l 119 (267)
T cd06645 58 IMMKDCKH-----------------SNIVAYFGSYLRRDKLWICMEFCGGGSLQDIYHV-TGPLSESQIAYVSRETLQGL 119 (267)
T ss_pred HHHHhCCC-----------------CCeeeEEEEEEeCCEEEEEEeccCCCcHHHHHHh-cCCCCHHHHHHHHHHHHHHH
Confidence 32222211 01122222222 4556899999999999876432 22345555555544444 7
Q ss_pred HHHHhcCccccCCCCCCeEEccCCCCceEEEecccccccC
Q 002039 280 HQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 319 (977)
Q Consensus 280 ~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~ 319 (977)
..+|..|++|+|++|.||+++.+ +.++|+|||++..+.
T Consensus 120 ~~lH~~~i~H~dlkp~nili~~~--~~~~l~dfg~~~~~~ 157 (267)
T cd06645 120 YYLHSKGKMHRDIKGANILLTDN--GHVKLADFGVSAQIT 157 (267)
T ss_pred HHHHHCCeecCCCCHHHEEECCC--CCEEECcceeeeEcc
Confidence 78899999999999999999865 889999999987664
No 196
>cd05087 PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases 1 and 3. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 1 (Aatyk1) and Aatyk3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk1 and Aatyk3 are members of the Aatyk subfamily of proteins. Aatyk3 is a receptor kinase containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 has a similar domain arrangement but without the transmembrane segment and is thus, a cytoplasmic (or nonreceptor) kinase. The expression of Aatyk1 (also referred simply as Aatyk) is upregulated during growth arrest and apoptosis in myeloid cells
Probab=99.14 E-value=1.9e-10 Score=125.65 Aligned_cols=136 Identities=16% Similarity=0.150 Sum_probs=88.3
Q ss_pred ccccccccEEEEEEec---CCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCcHHH
Q 002039 125 PLATASIAQVHRATLV---DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSE 201 (977)
Q Consensus 125 piasaSigqV~~A~l~---~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~E 201 (977)
.||+|++|.||+|+.. ++..||+|..+...... .+.++.+|
T Consensus 2 ~lg~G~~g~Vy~~~~~~~~~~~~~~~k~~~~~~~~~------------------------------------~~~~~~~E 45 (269)
T cd05087 2 EIGNGWFGKVILGEVNSGYTPAQVVVKELRVSASVQ------------------------------------EQMKFLEE 45 (269)
T ss_pred cccccCCceEEEEEEcCCCCceEEEEEecCCCCChH------------------------------------HHHHHHHH
Confidence 5899999999999864 34679999765432100 11234556
Q ss_pred HHHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeee----cCCceEEeeccCCCCCCChHHHHhc----CCCHHHHHHH
Q 002039 202 AENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ----SSETVLILEFMDGIRLNDCESLEAF----GVNKQKVVEE 273 (977)
Q Consensus 202 a~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~----~~~~vLVmE~i~G~~L~~~~~~~~~----~~~~~~l~~~ 273 (977)
...+.++.+ + .|.+++. ....++||||++|.+|.++...... ..+...+...
T Consensus 46 ~~~l~~l~h------------------~--~iv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~ 105 (269)
T cd05087 46 AQPYRSLQH------------------S--NLLQCLGQCTEVTPYLLVMEFCPLGDLKGYLRSCRKAELMTPDPTTLQRM 105 (269)
T ss_pred HHHHHhCCC------------------C--CEeeEEEEEcCCCCcEEEEECCCCCcHHHHHHHhhhcccccccHHHHHHH
Confidence 555554432 1 1223322 4557899999999999876432111 1222222233
Q ss_pred HHHHH--HHHHHhcCccccCCCCCCeEEccCCCCceEEEeccccccc
Q 002039 274 ITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKL 318 (977)
Q Consensus 274 l~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l 318 (977)
+.++. +..+|..|++|+|+||.||+++.+ +.++|+|||++...
T Consensus 106 ~~qi~~al~~lH~~~i~H~dlkp~nil~~~~--~~~kL~dfg~~~~~ 150 (269)
T cd05087 106 ACEIALGLLHLHKNNFIHSDLALRNCLLTAD--LTVKIGDYGLSHNK 150 (269)
T ss_pred HHHHHHHHHHHHHCCEeccccCcceEEEcCC--CcEEECCccccccc
Confidence 33332 678899999999999999999865 88999999998643
No 197
>cd06643 STKc_SLK Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase. Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration.
Probab=99.14 E-value=2.5e-10 Score=125.71 Aligned_cols=140 Identities=16% Similarity=0.173 Sum_probs=93.1
Q ss_pred cccccccccEEEEEEec-CCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCcHHHH
Q 002039 124 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (977)
Q Consensus 124 ~piasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea 202 (977)
+.||.|++|.||+|... ++..|++|.......... . ++.+|+
T Consensus 11 ~~lg~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~----~---------------------------------~~~~e~ 53 (282)
T cd06643 11 GELGDGAFGKVYKAQNKETGVLAAAKVIDTKSEEEL----E---------------------------------DYMVEI 53 (282)
T ss_pred hhcccCCCeEEEEEEECCCCeEEEEEEeCCCCHHHH----H---------------------------------HHHHHH
Confidence 56999999999999975 688899998654322110 0 233444
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeee-cCCceEEeeccCCCCCCChHHHHhcCCCHHHHHHHHHHHH--H
Q 002039 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--A 279 (977)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~--l 279 (977)
..+..+.+ ..-+.+...+. ....++||||++|.++.+........++...+...+.+++ +
T Consensus 54 ~~l~~l~h-----------------~~ii~~~~~~~~~~~~~~v~e~~~~~~l~~~~~~~~~~l~~~~~~~~~~qi~~~L 116 (282)
T cd06643 54 DILASCDH-----------------PNIVKLLDAFYYENNLWILIEFCAGGAVDAVMLELERPLTEPQIRVVCKQTLEAL 116 (282)
T ss_pred HHHHHCCC-----------------CCeeeEEEEEeeCCEEEEEEEecCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHH
Confidence 44443321 11122222222 4567899999999988765322223455555555544444 7
Q ss_pred HHHHhcCccccCCCCCCeEEccCCCCceEEEecccccccC
Q 002039 280 HQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 319 (977)
Q Consensus 280 ~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~ 319 (977)
..+|..|++|+|++|.||+++.+ ++++|+|||++....
T Consensus 117 ~~LH~~~i~H~dlkp~nili~~~--~~~kl~dfg~~~~~~ 154 (282)
T cd06643 117 NYLHENKIIHRDLKAGNILFTLD--GDIKLADFGVSAKNT 154 (282)
T ss_pred HHHHHCCeeecCCCcccEEEccC--CCEEEcccccccccc
Confidence 88999999999999999999865 899999999987654
No 198
>PTZ00283 serine/threonine protein kinase; Provisional
Probab=99.14 E-value=1.7e-10 Score=137.71 Aligned_cols=76 Identities=17% Similarity=0.227 Sum_probs=57.7
Q ss_pred ceEEeeccCCCCCCChHHHHh---cCCCHHHHHHHHHHHH--HHHHHhcCccccCCCCCCeEEccCCCCceEEEeccccc
Q 002039 242 TVLILEFMDGIRLNDCESLEA---FGVNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTK 316 (977)
Q Consensus 242 ~vLVmE~i~G~~L~~~~~~~~---~~~~~~~l~~~l~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~ 316 (977)
.++||||++|++|.+...... ..+....+...+.+++ +..+|..|++|||+||.|||++.+ +.++|+|||+++
T Consensus 114 i~lV~Ey~~~gsL~~~l~~~~~~~~~l~e~~~~~i~~qll~aL~~lH~~~IiHrDLKP~NILl~~~--~~vkL~DFGls~ 191 (496)
T PTZ00283 114 IALVLDYANAGDLRQEIKSRAKTNRTFREHEAGLLFIQVLLAVHHVHSKHMIHRDIKSANILLCSN--GLVKLGDFGFSK 191 (496)
T ss_pred EEEEEeCCCCCcHHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEEeCC--CCEEEEecccCe
Confidence 369999999999987643211 1244445555455544 788999999999999999999865 899999999987
Q ss_pred ccC
Q 002039 317 KLS 319 (977)
Q Consensus 317 ~l~ 319 (977)
.+.
T Consensus 192 ~~~ 194 (496)
T PTZ00283 192 MYA 194 (496)
T ss_pred ecc
Confidence 654
No 199
>cd05097 PTKc_DDR_like Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR)-like proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR-like proteins are members of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including
Probab=99.13 E-value=2e-10 Score=127.56 Aligned_cols=79 Identities=20% Similarity=0.234 Sum_probs=58.1
Q ss_pred cCCceEEeeccCCCCCCChHHHHh-----------cCCCHHHHHHHHHHHH--HHHHHhcCccccCCCCCCeEEccCCCC
Q 002039 239 SSETVLILEFMDGIRLNDCESLEA-----------FGVNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPH 305 (977)
Q Consensus 239 ~~~~vLVmE~i~G~~L~~~~~~~~-----------~~~~~~~l~~~l~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g 305 (977)
....++||||++|.+|.++..... ...+...+...+.++. +..+|..|++|+|+||+||+++.+ +
T Consensus 89 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~i~H~dlkp~Nill~~~--~ 166 (295)
T cd05097 89 DDPLCMITEYMENGDLNQFLSQREIESTFTHANNIPSVSIANLLYMAVQIASGMKYLASLNFVHRDLATRNCLVGNH--Y 166 (295)
T ss_pred CCccEEEEecCCCCcHHHHHHhccccccccccccCCcccHHHHHHHHHHHHHHHHHHHhcCeeccccChhhEEEcCC--C
Confidence 456789999999999987643211 0123334444444443 678899999999999999999865 7
Q ss_pred ceEEEecccccccC
Q 002039 306 RPILLDFGLTKKLS 319 (977)
Q Consensus 306 ~i~LiDFG~~~~l~ 319 (977)
.++|+|||++..+.
T Consensus 167 ~~kl~dfg~~~~~~ 180 (295)
T cd05097 167 TIKIADFGMSRNLY 180 (295)
T ss_pred cEEecccccccccc
Confidence 89999999987653
No 200
>cd05073 PTKc_Hck Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase. Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pa
Probab=99.13 E-value=2.3e-10 Score=124.33 Aligned_cols=140 Identities=21% Similarity=0.234 Sum_probs=94.3
Q ss_pred cccccccccEEEEEEecCCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCcHHHHH
Q 002039 124 TPLATASIAQVHRATLVDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEAE 203 (977)
Q Consensus 124 ~piasaSigqV~~A~l~~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea~ 203 (977)
+.||.|++|.||+|...++..||||+.+++-... -+|.+|++
T Consensus 12 ~~lg~g~~~~vy~~~~~~~~~~~iK~~~~~~~~~--------------------------------------~~~~~e~~ 53 (260)
T cd05073 12 KKLGAGQFGEVWMATYNKHTKVAVKTMKPGSMSV--------------------------------------EAFLAEAN 53 (260)
T ss_pred eEecCccceEEEEEEecCCccEEEEecCCChhHH--------------------------------------HHHHHHHH
Confidence 6799999999999998788889999876532100 02344555
Q ss_pred HHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeeecCCceEEeeccCCCCCCChHHHH-hcCCCHHHHHHHHHHHH--HH
Q 002039 204 NTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQSSETVLILEFMDGIRLNDCESLE-AFGVNKQKVVEEITRAY--AH 280 (977)
Q Consensus 204 n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~~~~~vLVmE~i~G~~L~~~~~~~-~~~~~~~~l~~~l~~~~--l~ 280 (977)
.+.++.+ ...+.+.........+++|||++|.+|.++.... ....+...+...+.++. +.
T Consensus 54 ~l~~l~~-----------------~~i~~~~~~~~~~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~aL~ 116 (260)
T cd05073 54 VMKTLQH-----------------DKLVKLHAVVTKEPIYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMA 116 (260)
T ss_pred HHHhcCC-----------------CCcceEEEEEcCCCeEEEEEeCCCCcHHHHHHhCCccccCHHHHHHHHHHHHHHHH
Confidence 4444322 1122333333345568999999999988764321 11233344444444433 67
Q ss_pred HHHhcCccccCCCCCCeEEccCCCCceEEEecccccccCH
Q 002039 281 QIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 320 (977)
Q Consensus 281 ~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 320 (977)
.+|..|++|+|++|.||+++.+ +.++|+|||.+..+..
T Consensus 117 ~lH~~~i~H~dl~p~ni~i~~~--~~~~l~d~~~~~~~~~ 154 (260)
T cd05073 117 FIEQRNYIHRDLRAANILVSAS--LVCKIADFGLARVIED 154 (260)
T ss_pred HHHhCCccccccCcceEEEcCC--CcEEECCCcceeeccC
Confidence 8899999999999999999855 8999999999877643
No 201
>cd05057 PTKc_EGFR_like Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instea
Probab=99.13 E-value=3e-10 Score=124.86 Aligned_cols=141 Identities=20% Similarity=0.174 Sum_probs=96.5
Q ss_pred cccccccccEEEEEEec-CCC----EEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCc
Q 002039 124 TPLATASIAQVHRATLV-DGR----QVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDF 198 (977)
Q Consensus 124 ~piasaSigqV~~A~l~-~G~----~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~ 198 (977)
+.||+|++|+||+|+.+ +|+ .||+|+......... ...+
T Consensus 13 ~~ig~g~~g~v~~~~~~~~~~~~~~~~aik~~~~~~~~~~------------------------------------~~~~ 56 (279)
T cd05057 13 KVLGSGAFGTVYKGVWIPEGEKVKIPVAIKVLREETSPKA------------------------------------NKEI 56 (279)
T ss_pred ceecCCCCccEEEEEEecCCCCcceEEEEEeccCCCCHHH------------------------------------HHHH
Confidence 67999999999999974 444 589997654322100 0123
Q ss_pred HHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeeecCCceEEeeccCCCCCCChHHHHhcCCCHHHHHHHHHHHH
Q 002039 199 NSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQSSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY 278 (977)
Q Consensus 199 ~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~ 278 (977)
.+|+..+.++.+ ..-+.+.....+...++||||++|.+|.+.........+...+...+.++.
T Consensus 57 ~~e~~~l~~l~h-----------------~~i~~~~~~~~~~~~~~v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~qi~ 119 (279)
T cd05057 57 LDEAYVMASVDH-----------------PHVVRLLGICLSSQVQLITQLMPLGCLLDYVRNHKDNIGSQYLLNWCVQIA 119 (279)
T ss_pred HHHHHHHHhCCC-----------------CCcceEEEEEecCceEEEEecCCCCcHHHHHHhccCCCCHHHHHHHHHHHH
Confidence 455555555422 111222222235677899999999999876443333455666666555554
Q ss_pred --HHHHHhcCccccCCCCCCeEEccCCCCceEEEecccccccC
Q 002039 279 --AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 319 (977)
Q Consensus 279 --l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~ 319 (977)
+..+|..|++|+|+||.||+++.+ +.++|+|||++..+.
T Consensus 120 ~~l~~LH~~~i~H~di~p~nil~~~~--~~~kL~dfg~~~~~~ 160 (279)
T cd05057 120 KGMSYLEEKRLVHRDLAARNVLVKTP--QHVKITDFGLAKLLD 160 (279)
T ss_pred HHHHHHHhCCEEecccCcceEEEcCC--CeEEECCCccccccc
Confidence 788999999999999999999855 889999999998765
No 202
>cd05581 STKc_PDK1 Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1. Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to auto
Probab=99.13 E-value=1.4e-10 Score=126.99 Aligned_cols=80 Identities=19% Similarity=0.232 Sum_probs=60.8
Q ss_pred cCCceEEeeccCCCCCCChHHHHhcCCCHHHHHHHHHHHH--HHHHHhcCccccCCCCCCeEEccCCCCceEEEeccccc
Q 002039 239 SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTK 316 (977)
Q Consensus 239 ~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~ 316 (977)
....++||||++|.+|.+... ....+....+...+.++. +..+|..|++|+|++|.||+++.+ +.++|+|||++.
T Consensus 74 ~~~~~lv~e~~~~~~L~~~l~-~~~~l~~~~~~~i~~ql~~~l~~Lh~~~~~H~dl~~~ni~i~~~--~~~~l~df~~~~ 150 (280)
T cd05581 74 EENLYFVLEYAPNGELLQYIR-KYGSLDEKCTRFYAAEILLALEYLHSKGIIHRDLKPENILLDKD--MHIKITDFGTAK 150 (280)
T ss_pred CceEEEEEcCCCCCcHHHHHH-HcCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCHHHeEECCC--CCEEecCCcccc
Confidence 345689999999999977643 222455555555444444 678999999999999999999865 899999999988
Q ss_pred ccCHH
Q 002039 317 KLSSS 321 (977)
Q Consensus 317 ~l~~~ 321 (977)
.+...
T Consensus 151 ~~~~~ 155 (280)
T cd05581 151 VLDPN 155 (280)
T ss_pred ccCCc
Confidence 77553
No 203
>cd06656 STKc_PAK3 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=99.13 E-value=1.8e-10 Score=128.24 Aligned_cols=139 Identities=15% Similarity=0.151 Sum_probs=92.8
Q ss_pred cccccccccEEEEEEe-cCCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCcHHHH
Q 002039 124 TPLATASIAQVHRATL-VDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (977)
Q Consensus 124 ~piasaSigqV~~A~l-~~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea 202 (977)
+.||+|++|.||+|+. .+|+.||||.......... -.+.+|.
T Consensus 25 ~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~-------------------------------------~~~~~e~ 67 (297)
T cd06656 25 EKIGQGASGTVYTAIDIATGQEVAIKQMNLQQQPKK-------------------------------------ELIINEI 67 (297)
T ss_pred eeeccCCCeEEEEEEECCCCCEEEEEEEecCccchH-------------------------------------HHHHHHH
Confidence 5699999999999997 4899999997643211000 0123343
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeee-cCCceEEeeccCCCCCCChHHHHhcCCCHHHHHHHHHHHH--H
Q 002039 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--A 279 (977)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~--l 279 (977)
..+..+.+ ..-+.+...+. ....++||||++|.+|.++. .....+...+...+.+++ +
T Consensus 68 ~~l~~~~h-----------------~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~--~~~~~~~~~~~~~~~~l~~~L 128 (297)
T cd06656 68 LVMRENKN-----------------PNIVNYLDSYLVGDELWVVMEYLAGGSLTDVV--TETCMDEGQIAAVCRECLQAL 128 (297)
T ss_pred HHHHhCCC-----------------CCEeeEEEEEecCCEEEEeecccCCCCHHHHH--HhCCCCHHHHHHHHHHHHHHH
Confidence 33332211 01112222222 45678999999999998764 233445555555444443 7
Q ss_pred HHHHhcCccccCCCCCCeEEccCCCCceEEEecccccccCH
Q 002039 280 HQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 320 (977)
Q Consensus 280 ~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 320 (977)
..+|..|++|+|+||.|||++.+ +.++|+|||.+..+..
T Consensus 129 ~~LH~~~i~H~dL~p~Nili~~~--~~~~l~Dfg~~~~~~~ 167 (297)
T cd06656 129 DFLHSNQVIHRDIKSDNILLGMD--GSVKLTDFGFCAQITP 167 (297)
T ss_pred HHHHHCCcccCCCCHHHEEECCC--CCEEECcCccceEccC
Confidence 78899999999999999999865 8999999999877654
No 204
>cd05061 PTKc_InsR Catalytic domain of the Protein Tyrosine Kinase, Insulin Receptor. Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR is a receptor tyr kinase (RTK) that is composed of two alphabeta heterodimers. Binding of the insulin ligand to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR signaling plays an important role in many cellular processes including glucose homeostasis, glycogen synthesis, lipid and protein meta
Probab=99.13 E-value=2.3e-10 Score=126.60 Aligned_cols=138 Identities=17% Similarity=0.205 Sum_probs=90.2
Q ss_pred cccccccccEEEEEEec------CCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccC
Q 002039 124 TPLATASIAQVHRATLV------DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELD 197 (977)
Q Consensus 124 ~piasaSigqV~~A~l~------~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld 197 (977)
+.||.|++|.||+|..+ .+..||||+........ .+.+
T Consensus 12 ~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~------------------------------------~~~~ 55 (288)
T cd05061 12 RELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLR------------------------------------ERIE 55 (288)
T ss_pred eeecCCCCcEEEEEEEeccCCCCcceEEEEEECCCcCCHH------------------------------------HHHH
Confidence 57999999999999753 25589999764321100 0112
Q ss_pred cHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceee---e-cCCceEEeeccCCCCCCChHHHHh---------cC
Q 002039 198 FNSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVI---Q-SSETVLILEFMDGIRLNDCESLEA---------FG 264 (977)
Q Consensus 198 ~~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~---~-~~~~vLVmE~i~G~~L~~~~~~~~---------~~ 264 (977)
+.+|...+.++.+ + .|++++ . ....++||||++|++|.+...... ..
T Consensus 56 ~~~e~~~l~~l~~------------------~--~i~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~ 115 (288)
T cd05061 56 FLNEASVMKGFTC------------------H--HVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPP 115 (288)
T ss_pred HHHHHHHHHhCCC------------------C--CeeeEEEEEcCCCCcEEEEeCCCCCCHHHHHHHhccccccCCCCCC
Confidence 3445454444421 1 233333 2 456799999999999988753211 01
Q ss_pred CCHHHHHHHHHHHH--HHHHHhcCccccCCCCCCeEEccCCCCceEEEecccccccC
Q 002039 265 VNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 319 (977)
Q Consensus 265 ~~~~~l~~~l~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~ 319 (977)
.....+...+.++. +..+|..|++|+|+||.||+++.+ +.++|+|||+++.+.
T Consensus 116 ~~~~~~~~~~~~l~~~l~~lH~~~i~H~dikp~nili~~~--~~~~L~Dfg~~~~~~ 170 (288)
T cd05061 116 PTLQEMIQMAAEIADGMAYLNAKKFVHRDLAARNCMVAHD--FTVKIGDFGMTRDIY 170 (288)
T ss_pred CCHHHHHHHHHHHHHHHHHHHhCCCcCCCCChheEEEcCC--CcEEECcCCcccccc
Confidence 12233334333333 678899999999999999999865 899999999987653
No 205
>cd07863 STKc_CDK4 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitou
Probab=99.13 E-value=1.7e-10 Score=127.34 Aligned_cols=75 Identities=21% Similarity=0.315 Sum_probs=55.0
Q ss_pred ceEEeeccCCCCCCChHHHH-hcCCCHHHHHHHHHHHH--HHHHHhcCccccCCCCCCeEEccCCCCceEEEeccccccc
Q 002039 242 TVLILEFMDGIRLNDCESLE-AFGVNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKL 318 (977)
Q Consensus 242 ~vLVmE~i~G~~L~~~~~~~-~~~~~~~~l~~~l~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l 318 (977)
.+++|||++| ++.++.... ..+++...+...+.+++ +..+|..|++|+|+||+||+++.+ +.++|+|||++..+
T Consensus 82 ~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~dikp~Nili~~~--~~~kl~dfg~~~~~ 158 (288)
T cd07863 82 VTLVFEHVDQ-DLRTYLDKVPPPGLPAETIKDLMRQFLRGLDFLHANCIVHRDLKPENILVTSG--GQVKLADFGLARIY 158 (288)
T ss_pred EEEEEccccc-CHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECCC--CCEEECccCccccc
Confidence 4799999986 454432211 12345555555555544 788999999999999999999865 89999999998765
Q ss_pred C
Q 002039 319 S 319 (977)
Q Consensus 319 ~ 319 (977)
+
T Consensus 159 ~ 159 (288)
T cd07863 159 S 159 (288)
T ss_pred c
Confidence 4
No 206
>cd00180 PKc Catalytic domain of Protein Kinases. Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which
Probab=99.13 E-value=3e-10 Score=117.36 Aligned_cols=139 Identities=20% Similarity=0.275 Sum_probs=97.1
Q ss_pred cccccccEEEEEEec-CCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCcHHHHHH
Q 002039 126 LATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEAEN 204 (977)
Q Consensus 126 iasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea~n 204 (977)
|++|++|+||+++.. +|++++||+.++..... .+-.+.+|.+.
T Consensus 1 l~~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~~------------------------------------~~~~~~~e~~~ 44 (215)
T cd00180 1 LGEGGFGTVYLARDKKTGKKVAIKIIKKEDSSS------------------------------------LLEELLREIEI 44 (215)
T ss_pred CCcCCceEEEEEEecCCCcEEEEEEeccccchh------------------------------------HHHHHHHHHHH
Confidence 689999999999985 49999999987654321 00123344444
Q ss_pred HHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeee----cCCceEEeeccCCCCCCChHHHHhcCCCHHHHHHHHHHHH--
Q 002039 205 TRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ----SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY-- 278 (977)
Q Consensus 205 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~----~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~-- 278 (977)
+.++.+ ..++.++. ....+++|||++|.+|.++........+...+...+.++.
T Consensus 45 ~~~l~~--------------------~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~ 104 (215)
T cd00180 45 LKKLNH--------------------PNIVKLYGVFEDENHLYLVMEYCEGGSLKDLLKENEGKLSEDEILRILLQILEG 104 (215)
T ss_pred HHhcCC--------------------CCeeeEeeeeecCCeEEEEEecCCCCcHHHHHHhccCCCCHHHHHHHHHHHHHH
Confidence 444421 23444443 3567999999999998877442212455555555444443
Q ss_pred HHHHHhcCccccCCCCCCeEEccCCCCceEEEecccccccCHH
Q 002039 279 AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSSS 321 (977)
Q Consensus 279 l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~~ 321 (977)
+..+|..|++|+|++|+||+++.. +++++|+|||.+......
T Consensus 105 l~~lh~~~~~H~dl~~~ni~~~~~-~~~~~l~d~~~~~~~~~~ 146 (215)
T cd00180 105 LEYLHSNGIIHRDLKPENILLDSD-NGKVKLADFGLSKLLTSD 146 (215)
T ss_pred HHHHHhCCeeccCCCHhhEEEeCC-CCcEEEecCCceEEccCC
Confidence 788999999999999999999861 378999999999877654
No 207
>KOG0580 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=99.13 E-value=2e-11 Score=124.95 Aligned_cols=156 Identities=19% Similarity=0.200 Sum_probs=100.5
Q ss_pred ccC-ccccccccccEEEEEEe-cCCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccC
Q 002039 120 DFV-ETPLATASIAQVHRATL-VDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELD 197 (977)
Q Consensus 120 ~~d-~~piasaSigqV~~A~l-~~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld 197 (977)
+|| .+|+|.|-||+||.|+. +++--||+||.... ++ . ......++.+|+.
T Consensus 23 dfeigr~LgkgkFG~vYlarekks~~IvalKVlfKs---qi----~---------------------~~~v~~qlrREiE 74 (281)
T KOG0580|consen 23 DFEIGRPLGKGKFGNVYLAREKKSLFIVALKVLFKS---QI----L---------------------KTQVEHQLRREIE 74 (281)
T ss_pred hccccccccCCccccEeEeeeccCCcEEEEeeeeHH---HH----H---------------------HhcchhhhhheeE
Confidence 444 48999999999999997 57889999997421 11 0 0111223333332
Q ss_pred cHHHH--HHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeeecCCceEEeeccCCCCCCChHHH-HhcCCCHHH---HH
Q 002039 198 FNSEA--ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQSSETVLILEFMDGIRLNDCESL-EAFGVNKQK---VV 271 (977)
Q Consensus 198 ~~~Ea--~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~~~~~vLVmE~i~G~~L~~~~~~-~~~~~~~~~---l~ 271 (977)
...-. .|+-++...|.+ +.+-+|++||..++.+.....- ....++... ..
T Consensus 75 Iqs~L~hpnilrlY~~fhd------------------------~~riyLilEya~~gel~k~L~~~~~~~f~e~~~a~Yi 130 (281)
T KOG0580|consen 75 IQSHLRHPNILRLYGYFHD------------------------SKRIYLILEYAPRGELYKDLQEGRMKRFDEQRAATYI 130 (281)
T ss_pred eecccCCccHHhhhhheec------------------------cceeEEEEEecCCchHHHHHHhcccccccccchhHHH
Confidence 22111 255555554431 4455799999987776543221 112233333 33
Q ss_pred HHHHHHHHHHHHhcCccccCCCCCCeEEccCCCCceEEEecccccccCHHHHHHHHHHH
Q 002039 272 EEITRAYAHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSSSMKQALAKMF 330 (977)
Q Consensus 272 ~~l~~~~l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~~~r~~~~~l~ 330 (977)
..++.+ +...|..+++|||+||.|+|++.+ +.+++.|||-...-+...|..+|.-+
T Consensus 131 ~q~A~A-l~y~h~k~VIhRdiKpenlLlg~~--~~lkiAdfGwsV~~p~~kR~tlcgt~ 186 (281)
T KOG0580|consen 131 KQLANA-LLYCHLKRVIHRDIKPENLLLGSA--GELKIADFGWSVHAPSNKRKTLCGTL 186 (281)
T ss_pred HHHHHH-HHHhccCCcccCCCCHHHhccCCC--CCeeccCCCceeecCCCCceeeeccc
Confidence 333333 556789999999999999999965 89999999998887777777776544
No 208
>cd05076 PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalyt
Probab=99.13 E-value=1.5e-10 Score=127.15 Aligned_cols=80 Identities=18% Similarity=0.140 Sum_probs=58.3
Q ss_pred cCCceEEeeccCCCCCCChHHHHhcCCCHHHHHHHHHHHH--HHHHHhcCccccCCCCCCeEEccCC-----CCceEEEe
Q 002039 239 SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDP-----PHRPILLD 311 (977)
Q Consensus 239 ~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~-----~g~i~LiD 311 (977)
....+|||||++|.+|.++.......++.......+.++. +..+|..|++|+|+||.||++++++ ...+++.|
T Consensus 88 ~~~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~dlkp~Nill~~~~~~~~~~~~~kl~d 167 (274)
T cd05076 88 GSENIMVEEFVEHGPLDVCLRKEKGRVPVAWKITVAQQLASALSYLEDKNLVHGNVCAKNILLARLGLAEGTSPFIKLSD 167 (274)
T ss_pred CCceEEEEecCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHcCCccCCCCCcccEEEeccCcccCccceeeecC
Confidence 4667999999999998776432233345555554444444 7889999999999999999997531 12489999
Q ss_pred ccccccc
Q 002039 312 FGLTKKL 318 (977)
Q Consensus 312 FG~~~~l 318 (977)
||+....
T Consensus 168 ~g~~~~~ 174 (274)
T cd05076 168 PGVSFTA 174 (274)
T ss_pred Ccccccc
Confidence 9987543
No 209
>cd07875 STKc_JNK1 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 1. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 1 (JNK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn
Probab=99.13 E-value=2.7e-10 Score=130.57 Aligned_cols=73 Identities=21% Similarity=0.413 Sum_probs=53.3
Q ss_pred CceEEeeccCCCCCCChHHHHhcCCCHHHHHHHHHHHH--HHHHHhcCccccCCCCCCeEEccCCCCceEEEeccccccc
Q 002039 241 ETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKL 318 (977)
Q Consensus 241 ~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l 318 (977)
..++||||++|. +.+.. ....+...+...+.+++ +..+|..|++|||+||.|||++.+ +.++|+|||++...
T Consensus 103 ~~~lv~e~~~~~-l~~~~---~~~~~~~~~~~~~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~--~~~kL~DfG~a~~~ 176 (364)
T cd07875 103 DVYIVMELMDAN-LCQVI---QMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSD--CTLKILDFGLARTA 176 (364)
T ss_pred eEEEEEeCCCCC-HHHHH---HhcCCHHHHHHHHHHHHHHHHHHhhCCeecCCCCHHHEEECCC--CcEEEEeCCCcccc
Confidence 358999999873 33321 12344445444444443 788999999999999999999865 89999999998765
Q ss_pred C
Q 002039 319 S 319 (977)
Q Consensus 319 ~ 319 (977)
.
T Consensus 177 ~ 177 (364)
T cd07875 177 G 177 (364)
T ss_pred C
Confidence 3
No 210
>cd06917 STKc_NAK1_like Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of cent
Probab=99.13 E-value=3.3e-10 Score=124.17 Aligned_cols=143 Identities=17% Similarity=0.165 Sum_probs=95.5
Q ss_pred cccccccccEEEEEEe-cCCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCcHHHH
Q 002039 124 TPLATASIAQVHRATL-VDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (977)
Q Consensus 124 ~piasaSigqV~~A~l-~~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea 202 (977)
+.||.|++|+||+|+. .+|+.||||+.+........ . ++.+|.
T Consensus 7 ~~l~~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~~--------------------------~----------~~~~e~ 50 (277)
T cd06917 7 ELIGRGAYGAVYRGKHVPTGRVVALKIINLDTPDDDV--------------------------S----------DIQREV 50 (277)
T ss_pred hheeccCCceEEEEEEcCCCcEEEEEEecCCCCchhH--------------------------H----------HHHHHH
Confidence 5799999999999997 58999999987643221100 0 123444
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCC-eEeceeee-cCCceEEeeccCCCCCCChHHHHhcCCCHHHHHHHHHHHH--
Q 002039 203 ENTRIVSANLGCKNKHEDSNKKPAYEVD-VLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY-- 278 (977)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~-v~vP~v~~-~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~-- 278 (977)
..+.++.. . .++. +.+...+. ....+|||||++|.+|.++.. ...++...+...+.++.
T Consensus 51 ~~l~~l~~-~--------------~~~~vi~~~~~~~~~~~~~lv~e~~~~~~L~~~~~--~~~l~~~~~~~i~~~i~~~ 113 (277)
T cd06917 51 ALLSQLRQ-S--------------QPPNITKYYGSYLKGPRLWIIMEYAEGGSVRTLMK--AGPIAEKYISVIIREVLVA 113 (277)
T ss_pred HHHHHhcc-C--------------CCCCeeeEeeeeeeCCEEEEEEecCCCCcHHHHHH--ccCCCHHHHHHHHHHHHHH
Confidence 45444432 0 0111 22222222 456789999999999987643 33445444444433333
Q ss_pred HHHHHhcCccccCCCCCCeEEccCCCCceEEEecccccccCHH
Q 002039 279 AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSSS 321 (977)
Q Consensus 279 l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~~ 321 (977)
+..+|..|++|+|++|.||+++.+ +.++|+|||.+..+...
T Consensus 114 l~~lh~~~i~H~dl~p~ni~i~~~--~~~~l~dfg~~~~~~~~ 154 (277)
T cd06917 114 LKYIHKVGVIHRDIKAANILVTNT--GNVKLCDFGVAALLNQN 154 (277)
T ss_pred HHHHHhCCcccCCcCHHHEEEcCC--CCEEEccCCceeecCCC
Confidence 678999999999999999999965 89999999998876543
No 211
>cd05116 PTKc_Syk Catalytic domain of the Protein Tyrosine Kinase, Spleen tyrosine kinase. Protein Tyrosine Kinase (PTK) family; Spleen tyrosine kinase (Syk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk, together with Zap-70, form the Syk subfamily of kinases which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Syk was first cloned from the spleen, and its function in hematopoietic cells is well-established. Syk is involved in the signaling downstream of activated receptors (including B-cell and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferatio
Probab=99.13 E-value=2.7e-10 Score=123.60 Aligned_cols=79 Identities=22% Similarity=0.292 Sum_probs=60.3
Q ss_pred cCCceEEeeccCCCCCCChHHHHhcCCCHHHHHHHHHHHH--HHHHHhcCccccCCCCCCeEEccCCCCceEEEeccccc
Q 002039 239 SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTK 316 (977)
Q Consensus 239 ~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~ 316 (977)
....++||||+++.+|.++... ...++...+...+.++. +..+|..|++|+|+||.||+++.+ +.++|+|||++.
T Consensus 67 ~~~~~lv~e~~~~~~L~~~l~~-~~~~~~~~~~~i~~qi~~al~~lH~~~i~H~dlkp~nill~~~--~~~kl~Dfg~~~ 143 (257)
T cd05116 67 AESWMLVMELAELGPLNKFLQK-NKHVTEKNITELVHQVSMGMKYLEETNFVHRDLAARNVLLVTQ--HYAKISDFGLSK 143 (257)
T ss_pred CCCcEEEEecCCCCcHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHCCEeecccchhhEEEcCC--CeEEECCCcccc
Confidence 3456899999999999876432 22345555555544444 788999999999999999999865 789999999987
Q ss_pred ccCH
Q 002039 317 KLSS 320 (977)
Q Consensus 317 ~l~~ 320 (977)
.+..
T Consensus 144 ~~~~ 147 (257)
T cd05116 144 ALGA 147 (257)
T ss_pred ccCC
Confidence 7643
No 212
>cd05080 PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of sign
Probab=99.13 E-value=3.7e-10 Score=124.38 Aligned_cols=139 Identities=17% Similarity=0.156 Sum_probs=93.9
Q ss_pred cccccccccEEEEEEe-----cCCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCc
Q 002039 124 TPLATASIAQVHRATL-----VDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDF 198 (977)
Q Consensus 124 ~piasaSigqV~~A~l-----~~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~ 198 (977)
+.||.|++|+||.++. .+++.||||+.+....... +..|
T Consensus 10 ~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~~~~~------------------------------------~~~~ 53 (283)
T cd05080 10 RVLGEGHFGKVSLYCYDPANDGTGEMVAVKTLKRECGQQN------------------------------------TSGW 53 (283)
T ss_pred eecccCCCcEEEEeeEccccCCCCceEEEEEeccccChHH------------------------------------HHHH
Confidence 5699999999988653 3688999998765422110 0123
Q ss_pred HHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCC-eEeceeee---cCCceEEeeccCCCCCCChHHHHhcCCCHHHHHHHH
Q 002039 199 NSEAENTRIVSANLGCKNKHEDSNKKPAYEVD-VLIPEVIQ---SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEI 274 (977)
Q Consensus 199 ~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~-v~vP~v~~---~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l 274 (977)
.+|.+.+.++.+ +. +.+...+. ....+++|||++|.+|.+.. ....++...+...+
T Consensus 54 ~~E~~~l~~l~h------------------~~i~~~~~~~~~~~~~~~~lv~e~~~~~~l~~~~--~~~~l~~~~~~~i~ 113 (283)
T cd05080 54 KKEINILKTLYH------------------ENIVKYKGCCSEQGGKGLQLIMEYVPLGSLRDYL--PKHKLNLAQLLLFA 113 (283)
T ss_pred HHHHHHHHhCCC------------------CCEeeEEEEEecCCCceEEEEecCCCCCCHHHHH--HHcCCCHHHHHHHH
Confidence 445554444421 11 11111111 12357999999999998764 33456666666555
Q ss_pred HHHH--HHHHHhcCccccCCCCCCeEEccCCCCceEEEecccccccCH
Q 002039 275 TRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 320 (977)
Q Consensus 275 ~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 320 (977)
.+++ +..+|..|++|+|+||.||+++.+ +.++|+|||++..+..
T Consensus 114 ~~l~~~l~~lH~~~i~H~dlkp~Nili~~~--~~~~l~dfg~~~~~~~ 159 (283)
T cd05080 114 QQICEGMAYLHSQHYIHRDLAARNVLLDND--RLVKIGDFGLAKAVPE 159 (283)
T ss_pred HHHHHHHHHHHHCCeeccccChheEEEcCC--CcEEEeecccccccCC
Confidence 5544 788999999999999999999865 8899999999887653
No 213
>cd05580 STKc_PKA Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase. Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubi
Probab=99.13 E-value=2.7e-10 Score=126.12 Aligned_cols=144 Identities=17% Similarity=0.148 Sum_probs=95.9
Q ss_pred cccccccccEEEEEEec-CCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCcHHHH
Q 002039 124 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (977)
Q Consensus 124 ~piasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea 202 (977)
+.||+|++|.||+|... +++.||||+.++..... .. ..-.+.+|+
T Consensus 7 ~~ig~g~~~~vy~~~~~~~~~~~aiK~~~~~~~~~----~~------------------------------~~~~~~~e~ 52 (290)
T cd05580 7 KTLGTGSFGRVMLVRHKGSGKYYALKILSKAKIVK----LK------------------------------QVEHVLNEK 52 (290)
T ss_pred EEeecCCCeEEEEEEEcCCCCEEEEEEEEHHHhhh----hh------------------------------HHHHHHHHH
Confidence 57999999999999974 78999999875421100 00 001234455
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeee-cCCceEEeeccCCCCCCChHHHHhcCCCHHHHHHHHHHHH--H
Q 002039 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--A 279 (977)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~--l 279 (977)
+.+.++.+ ..-+.+...+. ....++||||++|.+|.+..... ..+....+...+.+++ +
T Consensus 53 ~~l~~l~h-----------------~~i~~~~~~~~~~~~~~~v~e~~~~~~L~~~~~~~-~~l~~~~~~~~~~qil~~l 114 (290)
T cd05580 53 RILQSIRH-----------------PFLVNLYGSFQDDSNLYLVMEYVPGGELFSHLRKS-GRFPEPVARFYAAQVVLAL 114 (290)
T ss_pred HHHHhCCC-----------------CCccceeeEEEcCCeEEEEEecCCCCCHHHHHHHc-CCCCHHHHHHHHHHHHHHH
Confidence 55554431 11122223333 45568999999999987764322 3345555544444433 6
Q ss_pred HHHHhcCccccCCCCCCeEEccCCCCceEEEecccccccCHH
Q 002039 280 HQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSSS 321 (977)
Q Consensus 280 ~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~~ 321 (977)
..+|..|++|+|+||.||+|+.+ +.++|+|||++..+...
T Consensus 115 ~~lH~~~i~H~dl~p~nili~~~--~~~kl~dfg~~~~~~~~ 154 (290)
T cd05580 115 EYLHSLDIVYRDLKPENLLLDSD--GYIKITDFGFAKRVKGR 154 (290)
T ss_pred HHHHHCCEecCCCCHHHEEECCC--CCEEEeeCCCccccCCC
Confidence 78899999999999999999865 89999999998876543
No 214
>cd05606 STKc_beta_ARK Catalytic domain of the Protein Serine/Threonine Kinase, beta-adrenergic receptor kinase. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, beta-adrenergic receptor kinase (beta-ARK) group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. The beta-ARK group is co
Probab=99.13 E-value=3.6e-10 Score=124.42 Aligned_cols=79 Identities=18% Similarity=0.174 Sum_probs=59.4
Q ss_pred cCCceEEeeccCCCCCCChHHHHhcCCCHHHHHHHHHHHH--HHHHHhcCccccCCCCCCeEEccCCCCceEEEeccccc
Q 002039 239 SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTK 316 (977)
Q Consensus 239 ~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~ 316 (977)
....++||||++|.+|.+... ....+....+...+.+++ +..+|..|++|+|++|.||+++.+ +.++|+|||++.
T Consensus 69 ~~~~~~v~e~~~g~~L~~~l~-~~~~l~~~~~~~~~~ql~~~l~~lH~~~i~H~di~p~nili~~~--~~~kl~dfg~~~ 145 (278)
T cd05606 69 PDKLSFILDLMNGGDLHYHLS-QHGVFSEAEMRFYAAEIILGLEHMHNRFVVYRDLKPANILLDEH--GHVRISDLGLAC 145 (278)
T ss_pred CCEEEEEEecCCCCcHHHHHH-hcCCCCHHHHHHHHHHHHHHHHHHHHCCEEcCCCCHHHEEECCC--CCEEEccCcCcc
Confidence 355689999999999876542 222345555555444443 678899999999999999999865 889999999987
Q ss_pred ccCH
Q 002039 317 KLSS 320 (977)
Q Consensus 317 ~l~~ 320 (977)
.+..
T Consensus 146 ~~~~ 149 (278)
T cd05606 146 DFSK 149 (278)
T ss_pred ccCc
Confidence 6643
No 215
>cd08529 STKc_FA2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains. Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cyc
Probab=99.13 E-value=2.7e-10 Score=123.07 Aligned_cols=143 Identities=13% Similarity=0.119 Sum_probs=93.7
Q ss_pred cccccccccEEEEEEec-CCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCcHHHH
Q 002039 124 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (977)
Q Consensus 124 ~piasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea 202 (977)
+.|++|++|+||+|+.+ +|+.|++|......... .+ .-++.+|.
T Consensus 6 ~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~--~~---------------------------------~~~~~~e~ 50 (256)
T cd08529 6 NKIGKGSFGVVFKVVRKADKRVYAMKQIDLSKMNR--RE---------------------------------REEAIDEA 50 (256)
T ss_pred EEecCCCCeEEEEEEEcCCCcEEEEEEeehhhCCH--HH---------------------------------HHHHHHHH
Confidence 56999999999999974 78999999764321000 00 01233444
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeee-cCCceEEeeccCCCCCCChHHHH-hcCCCHHHHHHHHHHHH--
Q 002039 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLE-AFGVNKQKVVEEITRAY-- 278 (977)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLVmE~i~G~~L~~~~~~~-~~~~~~~~l~~~l~~~~-- 278 (977)
+.+.++++- .-+.+...+. ....++||||++|.+|.++.... ....+...+...+.++.
T Consensus 51 ~~l~~l~h~-----------------~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~~l~~a 113 (256)
T cd08529 51 RVLAKLDSS-----------------YIIRYYESFLDKGKLNIVMEYAENGDLHKLLKMQRGRPLPEDQVWRFFIQILLG 113 (256)
T ss_pred HHHHhcCCC-----------------CeehheeeeccCCEEEEEEEeCCCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHH
Confidence 444443220 0111111111 34568999999999998875432 22345555544444433
Q ss_pred HHHHHhcCccccCCCCCCeEEccCCCCceEEEecccccccCH
Q 002039 279 AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 320 (977)
Q Consensus 279 l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 320 (977)
+..+|..|++|+|+||.||+++.+ +.++|+|||++..+..
T Consensus 114 l~~lH~~~i~h~dl~~~nili~~~--~~~~l~df~~~~~~~~ 153 (256)
T cd08529 114 LAHLHSKKILHRDIKSLNLFLDAY--DNVKIGDLGVAKLLSD 153 (256)
T ss_pred HHHHHHCCcccCCCCcceEEEeCC--CCEEEcccccceeccC
Confidence 678899999999999999999865 8999999999887754
No 216
>PTZ00036 glycogen synthase kinase; Provisional
Probab=99.13 E-value=2.2e-10 Score=134.79 Aligned_cols=75 Identities=20% Similarity=0.221 Sum_probs=51.0
Q ss_pred eEEeeccCCCCCCChHH-H--HhcCCCHHHHHHHHHHHH--HHHHHhcCccccCCCCCCeEEccCCCCceEEEecccccc
Q 002039 243 VLILEFMDGIRLNDCES-L--EAFGVNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKK 317 (977)
Q Consensus 243 vLVmE~i~G~~L~~~~~-~--~~~~~~~~~l~~~l~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~ 317 (977)
++||||++| ++.+... . ....+....+...+.+++ +..+|..|++|||+||.|||++.+ ++.++|+|||+++.
T Consensus 143 ~lvmE~~~~-~l~~~~~~~~~~~~~l~~~~~~~~~~qi~~gL~yLH~~~IiHrDLKp~NILl~~~-~~~vkL~DFGla~~ 220 (440)
T PTZ00036 143 NVVMEFIPQ-TVHKYMKHYARNNHALPLFLVKLYSYQLCRALAYIHSKFICHRDLKPQNLLIDPN-THTLKLCDFGSAKN 220 (440)
T ss_pred EEEEecCCc-cHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCEecCCcCHHHEEEcCC-CCceeeeccccchh
Confidence 489999987 3433321 1 112233333333333333 788999999999999999999854 35799999999876
Q ss_pred cC
Q 002039 318 LS 319 (977)
Q Consensus 318 l~ 319 (977)
+.
T Consensus 221 ~~ 222 (440)
T PTZ00036 221 LL 222 (440)
T ss_pred cc
Confidence 54
No 217
>cd06624 STKc_ASK Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase. Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kina
Probab=99.12 E-value=2.6e-10 Score=124.43 Aligned_cols=141 Identities=14% Similarity=0.076 Sum_probs=92.5
Q ss_pred cccccccccEEEEEEec-CCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCcHHHH
Q 002039 124 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (977)
Q Consensus 124 ~piasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea 202 (977)
..||.|++|.||+|+.+ +++.|+||.......... + .+.+|+
T Consensus 14 ~~lg~g~~g~v~~~~~~~~~~~v~~k~~~~~~~~~~----~---------------------------------~~~~e~ 56 (268)
T cd06624 14 VVLGKGTYGIVYAARDLSTQVRIAIKEIPERDSRYV----Q---------------------------------PLHEEI 56 (268)
T ss_pred EEEecCCceEEEEeEecCCCcEEEEEEecCCCHHHH----H---------------------------------HHHHHH
Confidence 57999999999999964 788999997654322110 0 233455
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeee-cCCceEEeeccCCCCCCChHHHHhcCC--CHHHHHHHHHHHH-
Q 002039 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAFGV--NKQKVVEEITRAY- 278 (977)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLVmE~i~G~~L~~~~~~~~~~~--~~~~l~~~l~~~~- 278 (977)
..+.++++ ..-+.+-.... ....+++|||++|.+|.+......... +...+...+.++.
T Consensus 57 ~~l~~l~h-----------------~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~ 119 (268)
T cd06624 57 ALHSYLKH-----------------RNIVQYLGSDSENGFFKIFMEQVPGGSLSALLRSKWGPLKDNEQTIIFYTKQILE 119 (268)
T ss_pred HHHHhcCC-----------------CCeeeeeeeeccCCEEEEEEecCCCCCHHHHHHHhcccCCCcHHHHHHHHHHHHH
Confidence 55444432 00111111111 345689999999999988754322222 4444444444433
Q ss_pred -HHHHHhcCccccCCCCCCeEEccCCCCceEEEecccccccC
Q 002039 279 -AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 319 (977)
Q Consensus 279 -l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~ 319 (977)
+..+|..|++|+|+||.||+++.+ ++.++|+|||++..+.
T Consensus 120 al~~lH~~~i~h~dl~p~nil~~~~-~~~~~l~dfg~~~~~~ 160 (268)
T cd06624 120 GLKYLHDNQIVHRDIKGDNVLVNTY-SGVVKISDFGTSKRLA 160 (268)
T ss_pred HHHHHHHCCEeecCCCHHHEEEcCC-CCeEEEecchhheecc
Confidence 778899999999999999999753 4789999999987653
No 218
>cd05090 PTKc_Ror1 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly
Probab=99.12 E-value=3.1e-10 Score=124.97 Aligned_cols=141 Identities=13% Similarity=0.173 Sum_probs=91.6
Q ss_pred cccccccccEEEEEEe-----cCCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCc
Q 002039 124 TPLATASIAQVHRATL-----VDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDF 198 (977)
Q Consensus 124 ~piasaSigqV~~A~l-----~~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~ 198 (977)
+.||.|++|+||+|+. .+++.|+||..+....... .-++
T Consensus 11 ~~lg~g~~g~vy~~~~~~~~~~~~~~~~ik~~~~~~~~~~------------------------------------~~~~ 54 (283)
T cd05090 11 EELGECAFGKIYKGHLYLPGMDHAQLVAIKTLKDINNPQQ------------------------------------WGEF 54 (283)
T ss_pred eeccccCCcceEEEEEecCCCCCcceEEEEeccCCCCHHH------------------------------------HHHH
Confidence 5799999999999985 2568899997654221100 0023
Q ss_pred HHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeee-cCCceEEeeccCCCCCCChHHHHh---------------
Q 002039 199 NSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLEA--------------- 262 (977)
Q Consensus 199 ~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLVmE~i~G~~L~~~~~~~~--------------- 262 (977)
.+|+..+.++.+ ..-+.+...+. ....++||||++|.+|.++.....
T Consensus 55 ~~E~~~l~~l~h-----------------~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~ 117 (283)
T cd05090 55 QQEASLMAELHH-----------------PNIVCLLGVVTQEQPVCMLFEYLNQGDLHEFLIMRSPHSDVGCSSDEDGTV 117 (283)
T ss_pred HHHHHHHhhCCC-----------------CCeeeEEEEEecCCceEEEEEcCCCCcHHHHHHhcCCCCcccccccccccc
Confidence 445555444422 01122222222 455689999999999887643221
Q ss_pred -cCCCHHHHHHHHHHHH--HHHHHhcCccccCCCCCCeEEccCCCCceEEEecccccccC
Q 002039 263 -FGVNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 319 (977)
Q Consensus 263 -~~~~~~~l~~~l~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~ 319 (977)
..++...+...+.++. +..+|..|++|+|+||.|||++.+ +.++|+|||++..+.
T Consensus 118 ~~~~~~~~~~~i~~~i~~al~~lH~~~i~H~dlkp~nili~~~--~~~kl~dfg~~~~~~ 175 (283)
T cd05090 118 KSSLDHGDFLHIAIQIAAGMEYLSSHFFVHKDLAARNILIGEQ--LHVKISDLGLSREIY 175 (283)
T ss_pred ccccCHHHHHHHHHHHHHHHHHHHhcCeehhccccceEEEcCC--CcEEecccccccccc
Confidence 1123333444444433 788999999999999999999865 789999999988763
No 219
>cd05106 PTKc_CSF-1R Catalytic domain of the Protein Tyrosine Kinase, Colony-Stimulating Factor-1 Receptor. Protein Tyrosine Kinase (PTK) family; Colony-Stimulating Factor-1 Receptor (CSF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CSF-1R, also called c-Fms, is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of CSF-1R to its ligand, CSF-1, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. CSF-1R signaling is criti
Probab=99.12 E-value=2.7e-10 Score=131.18 Aligned_cols=50 Identities=14% Similarity=0.251 Sum_probs=39.8
Q ss_pred HHHHHHHHHHH--HHHHHhcCccccCCCCCCeEEccCCCCceEEEecccccccC
Q 002039 268 QKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 319 (977)
Q Consensus 268 ~~l~~~l~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~ 319 (977)
..+...+.++. +..+|..|++|||+||.|||++.+ +.++|+|||++..+.
T Consensus 212 ~~~~~i~~qi~~aL~yLH~~giiHrDLkp~Nil~~~~--~~~kL~DfGla~~~~ 263 (374)
T cd05106 212 DDLLRFSSQVAQGMDFLASKNCIHRDVAARNVLLTDG--RVAKICDFGLARDIM 263 (374)
T ss_pred HHHHHHHHHHHHHHHHHHHCCEEeccCchheEEEeCC--CeEEEeeceeeeecc
Confidence 33444444443 778999999999999999999855 789999999987664
No 220
>PRK10345 hypothetical protein; Provisional
Probab=99.12 E-value=4.1e-10 Score=118.27 Aligned_cols=140 Identities=14% Similarity=0.150 Sum_probs=87.3
Q ss_pred ccccccccccEEEEEEecCCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCcHHHH
Q 002039 123 ETPLATASIAQVHRATLVDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (977)
Q Consensus 123 ~~piasaSigqV~~A~l~~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea 202 (977)
.++||+|+++.||. .-.++.. +||+.+++-... +-++++|.
T Consensus 7 ~~~LG~G~~~~Vy~-hp~~~~k-~IKv~~~~~~~~-------------------------------------~~~~~rEi 47 (210)
T PRK10345 7 QSPLGTGRHRKCYA-HPEDAQR-CIKIVYHRGDGG-------------------------------------DKEIRREL 47 (210)
T ss_pred cceecCCCceEEEE-CCCCcCe-EEEEEeccccch-------------------------------------HHHHHHHH
Confidence 47899999999996 2235555 699887642110 00234555
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeee--cCC---ce---EEeec--cCCCCCCChHHHHhcCCCHH-HHH
Q 002039 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ--SSE---TV---LILEF--MDGIRLNDCESLEAFGVNKQ-KVV 271 (977)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~--~~~---~v---LVmE~--i~G~~L~~~~~~~~~~~~~~-~l~ 271 (977)
+.+..+.+.- .....|+++|. .++ .+ +|||| +.|.+|.++.. ...++.. ...
T Consensus 48 ~~l~~L~~~~---------------~~h~nIvr~yg~~et~~g~g~v~~~I~e~~G~~~~tL~~~l~--~~~~~e~~~~~ 110 (210)
T PRK10345 48 KYYAHLSRRL---------------IDWSGIPRYYGTVETDCGTGYVYDVIADFDGKPSITLTEFAE--QCRYEEDVAQL 110 (210)
T ss_pred HHHHHhhccC---------------CCCcccceeeEEEEeCCCCeEEEEEEecCCCCcchhHHHHHH--cccccHhHHHH
Confidence 5555553311 11334777764 222 12 78999 55788888753 2223322 234
Q ss_pred HHHHHHHHHHHHhcCccccCCCCCCeEEccC--CCCceEEEeccccccc
Q 002039 272 EEITRAYAHQIYVDGFFNGDPHPGNFLVSKD--PPHRPILLDFGLTKKL 318 (977)
Q Consensus 272 ~~l~~~~l~~i~~~G~~H~D~hPgNIlv~~~--~~g~i~LiDFG~~~~l 318 (977)
..++..+.+.+|.+||+|||+||.|||++.. ++++++|+||+-...+
T Consensus 111 ~~~L~~l~~yLh~~~IvhrDlKp~NILl~~~~~~~~~~~LiDg~G~~~~ 159 (210)
T PRK10345 111 RQLLKKLKRYLLDNRIVTMELKPQNILCQRISESEVIPVVCDNIGESTF 159 (210)
T ss_pred HHHHHHHHHHHHHCCEeecCCCHHHEEEeccCCCCCcEEEEECCCCcce
Confidence 4555566789999999999999999999853 2347999994444443
No 221
>cd07868 STKc_CDK8 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 8. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK8 can act as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA p
Probab=99.12 E-value=2.4e-10 Score=128.22 Aligned_cols=140 Identities=15% Similarity=0.190 Sum_probs=86.2
Q ss_pred CccccccccccEEEEEEec---CCCEEEEEEecCC-hhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccC
Q 002039 122 VETPLATASIAQVHRATLV---DGRQVVVKVQHQG-IKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELD 197 (977)
Q Consensus 122 d~~piasaSigqV~~A~l~---~G~~VAVKv~~p~-i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld 197 (977)
+...||.|++|.||+|+.+ +++.||||+.... ... +
T Consensus 5 ~~~~lG~G~~g~Vy~~~~~~~~~~~~~aiK~~~~~~~~~----------------------------------------~ 44 (317)
T cd07868 5 EGCKVGRGTYGHVYKAKRKDGKDDRDYALKQIEGTGISM----------------------------------------S 44 (317)
T ss_pred cccccccCCCeEEEEEEEccCCCCceEEEEEECCCCCcH----------------------------------------H
Confidence 3568999999999999964 5688999976432 111 1
Q ss_pred cHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeee---cCCceEEeeccCCCCCCChHHHHh--------cCCC
Q 002039 198 FNSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ---SSETVLILEFMDGIRLNDCESLEA--------FGVN 266 (977)
Q Consensus 198 ~~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~---~~~~vLVmE~i~G~~L~~~~~~~~--------~~~~ 266 (977)
+.+|++.+.++.+ ...+.+-..+. ....+++|||+++ .+.++..... ..+.
T Consensus 45 ~~~E~~~l~~l~h-----------------~niv~~~~~~~~~~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~l~ 106 (317)
T cd07868 45 ACREIALLRELKH-----------------PNVISLQKVFLSHADRKVWLLFDYAEH-DLWHIIKFHRASKANKKPVQLP 106 (317)
T ss_pred HHHHHHHHHhcCC-----------------CCCcceeeeEecCCCcEEEEEEeccCC-CHHHHHHhcccccccCCcccCC
Confidence 2234444444422 11122223332 2234799999976 4444322111 1133
Q ss_pred HHHHHHHHHHHH--HHHHHhcCccccCCCCCCeEEccC--CCCceEEEecccccccC
Q 002039 267 KQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKD--PPHRPILLDFGLTKKLS 319 (977)
Q Consensus 267 ~~~l~~~l~~~~--l~~i~~~G~~H~D~hPgNIlv~~~--~~g~i~LiDFG~~~~l~ 319 (977)
...+...+.+++ +..+|..|++|||+||.|||+..+ .++.++|+|||++..++
T Consensus 107 ~~~~~~i~~qi~~al~~LH~~~ivHrDlkp~Nil~~~~~~~~~~~kl~DfG~a~~~~ 163 (317)
T cd07868 107 RGMVKSLLYQILDGIHYLHANWVLHRDLKPANILVMGEGPERGRVKIADMGFARLFN 163 (317)
T ss_pred HHHHHHHHHHHHHHHHHHHhCCEEcCCCCHHHEEEecCCCCcCcEEEeecCceeccC
Confidence 333333333433 778899999999999999999532 24789999999987654
No 222
>cd05613 STKc_MSK1_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 1. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK1, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph
Probab=99.11 E-value=2.3e-10 Score=126.56 Aligned_cols=78 Identities=23% Similarity=0.276 Sum_probs=59.4
Q ss_pred CCceEEeeccCCCCCCChHHHHhcCCCHHHHHHHHHHHH--HHHHHhcCccccCCCCCCeEEccCCCCceEEEecccccc
Q 002039 240 SETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKK 317 (977)
Q Consensus 240 ~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~ 317 (977)
...++||||++|.+|.+.... ...+....+...+.++. +..+|..|++|+|++|.||+++.+ ++++|+|||++..
T Consensus 78 ~~~~lv~e~~~~~~L~~~l~~-~~~l~~~~~~~~~~qi~~al~~lH~~~i~H~dl~p~nil~~~~--~~~kl~dfg~~~~ 154 (290)
T cd05613 78 TKLHLILDYINGGELFTHLSQ-RERFKEQEVQIYSGEIVLALEHLHKLGIIYRDIKLENILLDSN--GHVVLTDFGLSKE 154 (290)
T ss_pred CeEEEEEecCCCCcHHHHHHH-cCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHeEECCC--CCEEEeeCcccee
Confidence 445799999999998776432 23345555554443443 788999999999999999999865 8999999999887
Q ss_pred cCH
Q 002039 318 LSS 320 (977)
Q Consensus 318 l~~ 320 (977)
+..
T Consensus 155 ~~~ 157 (290)
T cd05613 155 FHE 157 (290)
T ss_pred ccc
Confidence 654
No 223
>cd05056 PTKc_FAK Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase. Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions
Probab=99.11 E-value=2.6e-10 Score=124.65 Aligned_cols=142 Identities=18% Similarity=0.150 Sum_probs=93.2
Q ss_pred cccccccccEEEEEEecC----CCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCcH
Q 002039 124 TPLATASIAQVHRATLVD----GRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFN 199 (977)
Q Consensus 124 ~piasaSigqV~~A~l~~----G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~ 199 (977)
+.||.|++|.||+|+..+ ...|+||+.+........ -.+.
T Consensus 12 ~~lg~g~~g~v~~~~~~~~~~~~~~v~ik~~~~~~~~~~~------------------------------------~~~~ 55 (270)
T cd05056 12 RCIGEGQFGDVYQGVYMSPENEKIAVAVKTCKNCTSPSVR------------------------------------EKFL 55 (270)
T ss_pred eeeCCccceeEEEEEEecCCCCCcceEEEecCCcCCHHHH------------------------------------HHHH
Confidence 679999999999998743 246899976543321100 0233
Q ss_pred HHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeeecCCceEEeeccCCCCCCChHHHHhcCCCHHHHHHHHHHHH-
Q 002039 200 SEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQSSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY- 278 (977)
Q Consensus 200 ~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~- 278 (977)
+|+..+.++.+ ...+.+..++.....++||||++|.+|.++........+...+...+.++.
T Consensus 56 ~e~~~l~~~~h-----------------~~i~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~l~~ 118 (270)
T cd05056 56 QEAYIMRQFDH-----------------PHIVKLIGVITENPVWIVMELAPLGELRSYLQVNKYSLDLASLILYSYQLST 118 (270)
T ss_pred HHHHHHHhCCC-----------------CchhceeEEEcCCCcEEEEEcCCCCcHHHHHHhCCCCCCHHHHHHHHHHHHH
Confidence 45444444321 011222222235567899999999999887543222345554444444433
Q ss_pred -HHHHHhcCccccCCCCCCeEEccCCCCceEEEecccccccCH
Q 002039 279 -AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 320 (977)
Q Consensus 279 -l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 320 (977)
+..+|..|++|+|++|.||+++.+ +.++|+|||++..+..
T Consensus 119 ~l~~lH~~~~~H~dl~p~nili~~~--~~~~l~d~g~~~~~~~ 159 (270)
T cd05056 119 ALAYLESKRFVHRDIAARNVLVSSP--DCVKLGDFGLSRYLED 159 (270)
T ss_pred HHHHHHhCCeeccccChheEEEecC--CCeEEccCceeeeccc
Confidence 678899999999999999999865 8899999999887654
No 224
>cd05049 PTKc_Trk Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalyt
Probab=99.11 E-value=3.1e-10 Score=124.51 Aligned_cols=140 Identities=18% Similarity=0.176 Sum_probs=91.2
Q ss_pred cccccccccEEEEEEecC------CCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccC
Q 002039 124 TPLATASIAQVHRATLVD------GRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELD 197 (977)
Q Consensus 124 ~piasaSigqV~~A~l~~------G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld 197 (977)
+.||.|++|.||+|+..+ ++.||||+.+....... +-+
T Consensus 11 ~~lg~g~~~~v~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~------------------------------------~~~ 54 (280)
T cd05049 11 RELGEGAFGKVFLGECYHLEPENDKELVAVKTLKETASNDA------------------------------------RKD 54 (280)
T ss_pred hhccccCCceEeeeeeccccCcCCcceEEEEeecccCCHHH------------------------------------HHH
Confidence 569999999999998743 47899998654322110 013
Q ss_pred cHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeee-cCCceEEeeccCCCCCCChHHHHh-------------c
Q 002039 198 FNSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLEA-------------F 263 (977)
Q Consensus 198 ~~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLVmE~i~G~~L~~~~~~~~-------------~ 263 (977)
|.+|++.+.++.+. ..+.+...+. ....++||||++|.+|.+...... .
T Consensus 55 ~~~e~~~l~~l~~~-----------------~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~ 117 (280)
T cd05049 55 FEREAELLTNFQHE-----------------NIVKFYGVCTEGDPPIMVFEYMEHGDLNKFLRSHGPDAAFLKSPDSPMG 117 (280)
T ss_pred HHHHHHHHHhcCCC-----------------CchheeeEEecCCCeEEEEecCCCCCHHHHHHhcCCchhhhcccccccc
Confidence 44565555554320 0111222222 456799999999999987643211 1
Q ss_pred CCCHHHHHHHHHHHH--HHHHHhcCccccCCCCCCeEEccCCCCceEEEeccccccc
Q 002039 264 GVNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKL 318 (977)
Q Consensus 264 ~~~~~~l~~~l~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l 318 (977)
.+....+...+.++. +..+|..|++|+|++|+||+++.+ +.++|+|||++..+
T Consensus 118 ~l~~~~~~~~~~~i~~~l~~lH~~~i~h~dlkp~nili~~~--~~~kl~d~g~~~~~ 172 (280)
T cd05049 118 ELTLSQLLQIAVQIASGMVYLASQHFVHRDLATRNCLVGYD--LVVKIGDFGMSRDV 172 (280)
T ss_pred cccHHHHHHHHHHHHHHHHHHhhCCeeccccccceEEEcCC--CeEEECCcccceec
Confidence 122333333333333 678899999999999999999866 89999999998754
No 225
>KOG0612 consensus Rho-associated, coiled-coil containing protein kinase [Signal transduction mechanisms]
Probab=99.11 E-value=4.5e-11 Score=144.25 Aligned_cols=76 Identities=21% Similarity=0.267 Sum_probs=56.9
Q ss_pred CCceEEeeccCCCCCCChHHHHhcC-CCHHHHHHHHHHHH--HHHHHhcCccccCCCCCCeEEccCCCCceEEEeccccc
Q 002039 240 SETVLILEFMDGIRLNDCESLEAFG-VNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTK 316 (977)
Q Consensus 240 ~~~vLVmE~i~G~~L~~~~~~~~~~-~~~~~l~~~l~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~ 316 (977)
...||||||++|+.|-.+. ...+ ++....-..+.+++ +..||.-|+||||+||.|||++.. |.|+|.|||.|-
T Consensus 148 ~~LYlVMdY~pGGDlltLl--Sk~~~~pE~~ArFY~aEiVlAldslH~mgyVHRDiKPDNvLld~~--GHikLADFGsCl 223 (1317)
T KOG0612|consen 148 RYLYLVMDYMPGGDLLTLL--SKFDRLPEDWARFYTAEIVLALDSLHSMGYVHRDIKPDNVLLDKS--GHIKLADFGSCL 223 (1317)
T ss_pred cceEEEEecccCchHHHHH--hhcCCChHHHHHHHHHHHHHHHHHHHhccceeccCCcceeEeccc--CcEeeccchhHH
Confidence 3457999999999887663 3333 33322222333332 788999999999999999999976 999999999988
Q ss_pred ccC
Q 002039 317 KLS 319 (977)
Q Consensus 317 ~l~ 319 (977)
.+.
T Consensus 224 km~ 226 (1317)
T KOG0612|consen 224 KMD 226 (1317)
T ss_pred hcC
Confidence 775
No 226
>cd06613 STKc_MAP4K3_like Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activ
Probab=99.11 E-value=3.4e-10 Score=122.68 Aligned_cols=141 Identities=16% Similarity=0.167 Sum_probs=95.0
Q ss_pred cccccccccEEEEEEec-CCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCcHHHH
Q 002039 124 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (977)
Q Consensus 124 ~piasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea 202 (977)
+.+|.|++|.||+|+.. +++.|++|+........ .. .+.+|.
T Consensus 9 ~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~----~~---------------------------------~~~~e~ 51 (262)
T cd06613 9 QRIGSGTYGDVYKARDIATGELVAIKVIKLEPGDD----FE---------------------------------IIQQEI 51 (262)
T ss_pred EEecCCCceEEEEeEecCCCCEEEEEEEEcCchhh----HH---------------------------------HHHHHH
Confidence 67999999999999974 68899999876432210 00 122333
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeee-cCCceEEeeccCCCCCCChHHHHhcCCCHHHHHHHHHHHH--H
Q 002039 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--A 279 (977)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~--l 279 (977)
..+.++.+ ...+.+...+. ....+++|||++|.+|.++.......++...+...+.+++ +
T Consensus 52 ~~l~~~~h-----------------~~i~~~~~~~~~~~~~~l~~e~~~~~~l~~~~~~~~~~l~~~~~~~~~~ql~~~l 114 (262)
T cd06613 52 SMLKECRH-----------------PNIVAYFGSYLRRDKLWIVMEYCGGGSLQDIYQVTRGPLSELQIAYVCRETLKGL 114 (262)
T ss_pred HHHHhCCC-----------------CChhceEEEEEeCCEEEEEEeCCCCCcHHHHHHhhccCCCHHHHHHHHHHHHHHH
Confidence 33333321 01112222222 4556899999999999887543334566655555555444 6
Q ss_pred HHHHhcCccccCCCCCCeEEccCCCCceEEEecccccccCH
Q 002039 280 HQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 320 (977)
Q Consensus 280 ~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 320 (977)
..+|..|++|+|++|.||+++.+ +.++|+|||++..+..
T Consensus 115 ~~lh~~~i~h~dl~p~ni~i~~~--~~~~l~d~g~~~~~~~ 153 (262)
T cd06613 115 AYLHETGKIHRDIKGANILLTED--GDVKLADFGVSAQLTA 153 (262)
T ss_pred HHHHhCCceecCCChhhEEECCC--CCEEECccccchhhhh
Confidence 78899999999999999999965 8899999999876653
No 227
>cd07853 STKc_NLK Catalytic domain of the Serine/Threonine Kinase, Nemo-Like Kinase. Serine/Threonine Kinases (STKs), Nemo-Like Kinase (NLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mitogen-activated protein kinases (MAPKs) are important mediators of cellular responses to extracellular signals. NLK is an atypical MAPK that is not regulated by a MAPK kinase. It functions downstream of the MAPK kinase kinase Tak1, which also plays a role in activating the JNK and p38 MAPKs. The Tak1/NLK pathways are regulated by Wnts, a family of secreted proteins that is critical in the control of asymmetric division and cell polarity. NLK can phosphorylate transcription
Probab=99.11 E-value=1.6e-10 Score=133.04 Aligned_cols=75 Identities=21% Similarity=0.314 Sum_probs=53.4
Q ss_pred CceEEeeccCCCCCCChHHHHhcCCCHHHHHHHHHHHH--HHHHHhcCccccCCCCCCeEEccCCCCceEEEeccccccc
Q 002039 241 ETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKL 318 (977)
Q Consensus 241 ~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l 318 (977)
..++||||+.+ .|.+... ....++...+...+.+++ +..+|..|++|+|+||.|||++.+ +.++|+|||++...
T Consensus 78 ~~~lv~e~~~~-~l~~~~~-~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivH~dlkp~Nili~~~--~~~kL~Dfg~a~~~ 153 (372)
T cd07853 78 EIYVVTELMQS-DLHKIIV-SPQPLSSDHVKVFLYQILRGLKYLHSAGILHRDIKPGNLLVNSN--CVLKICDFGLARVE 153 (372)
T ss_pred eEEEEeecccc-CHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCChHHEEECCC--CCEEeccccceeec
Confidence 45899999975 3333211 122344444444444433 788999999999999999999865 89999999998754
Q ss_pred C
Q 002039 319 S 319 (977)
Q Consensus 319 ~ 319 (977)
.
T Consensus 154 ~ 154 (372)
T cd07853 154 E 154 (372)
T ss_pred c
Confidence 3
No 228
>cd07847 STKc_CDKL1_4 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The functio
Probab=99.11 E-value=2e-10 Score=126.33 Aligned_cols=142 Identities=20% Similarity=0.225 Sum_probs=94.2
Q ss_pred cccccccccEEEEEEec-CCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCcHHHH
Q 002039 124 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (977)
Q Consensus 124 ~piasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea 202 (977)
+.|++|++|+||+|+.+ +|+.||+|+......... .+-.+.+|+
T Consensus 7 ~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~-----------------------------------~~~~~~~e~ 51 (286)
T cd07847 7 SKIGEGSYGVVFKCRNRETGQIVAIKKFVESEDDPV-----------------------------------IKKIALREI 51 (286)
T ss_pred eeecccCCeEEEEEEECCCCcEEEEEEEeecccCcc-----------------------------------ccHHHHHHH
Confidence 46899999999999985 699999998643211000 000133444
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeee-cCCceEEeeccCCCCCCChHHHHhcCCCHHHHHHHHHHHH--H
Q 002039 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--A 279 (977)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~--l 279 (977)
..+.++.+ ..-+.+...+. ....++||||++|..+..+.. ....++...+...+.+++ +
T Consensus 52 ~~l~~~~h-----------------~~i~~~~~~~~~~~~~~~v~e~~~~~~l~~~~~-~~~~~~~~~~~~~~~ql~~~l 113 (286)
T cd07847 52 RMLKQLKH-----------------PNLVNLIEVFRRKRKLHLVFEYCDHTVLNELEK-NPRGVPEHLIKKIIWQTLQAV 113 (286)
T ss_pred HHHHhCCC-----------------CCEeeeeeEEeeCCEEEEEEeccCccHHHHHHh-CCCCCCHHHHHHHHHHHHHHH
Confidence 44444321 11122223333 445689999999987765532 122355555555555554 7
Q ss_pred HHHHhcCccccCCCCCCeEEccCCCCceEEEecccccccCH
Q 002039 280 HQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 320 (977)
Q Consensus 280 ~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 320 (977)
..+|..|++|+|+||.||+++.+ +.++|+|||++..+..
T Consensus 114 ~~LH~~~i~H~dl~p~nil~~~~--~~~~l~dfg~~~~~~~ 152 (286)
T cd07847 114 NFCHKHNCIHRDVKPENILITKQ--GQIKLCDFGFARILTG 152 (286)
T ss_pred HHHHHCCceecCCChhhEEEcCC--CcEEECccccceecCC
Confidence 78899999999999999999865 8999999999987754
No 229
>cd07844 STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), PCTAIRE-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily share sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The association of PCTAIRE-like proteins with cyclins has not been widely studied, although PFTAIRE-1 has been shown to function as a CDK which is regulated by cyclin D3 as well as the
Probab=99.11 E-value=2.2e-10 Score=126.58 Aligned_cols=139 Identities=19% Similarity=0.187 Sum_probs=92.0
Q ss_pred cccccccccEEEEEEec-CCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCcHHHH
Q 002039 124 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (977)
Q Consensus 124 ~piasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea 202 (977)
++||+|++|.||+|+.+ +|+.||||..+....... ...+.+|.
T Consensus 11 ~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~------------------------------------~~~~~~E~ 54 (291)
T cd07844 11 DKLGEGSYATVYKGRSKLTGQLVALKEIRLEHEEGA------------------------------------PFTAIREA 54 (291)
T ss_pred EEEeecCCeEEEEEEEcCCCcEEEEEEEecccccCC------------------------------------chhHHHHH
Confidence 68999999999999975 789999998754322100 00123455
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeee-cCCceEEeeccCCCCCCChHHHHhcCCCHHHHHHHHHHHH--H
Q 002039 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--A 279 (977)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~--l 279 (977)
..+.++.+ ..-+.+-.++. ....++||||++| +|.++.......++...+...+.+++ +
T Consensus 55 ~~l~~l~h-----------------~~i~~~~~~~~~~~~~~lv~e~~~~-~L~~~~~~~~~~~~~~~~~~~~~ql~~al 116 (291)
T cd07844 55 SLLKDLKH-----------------ANIVTLHDIIHTKKTLTLVFEYLDT-DLKQYMDDCGGGLSMHNVRLFLFQLLRGL 116 (291)
T ss_pred HHHhhCCC-----------------cceeeEEEEEecCCeEEEEEecCCC-CHHHHHHhCCCCCCHHHHHHHHHHHHHHH
Confidence 55544422 11122222322 3456899999987 66554322222345555555444444 7
Q ss_pred HHHHhcCccccCCCCCCeEEccCCCCceEEEeccccccc
Q 002039 280 HQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKL 318 (977)
Q Consensus 280 ~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l 318 (977)
..+|..|++|+|++|.||+++.+ +.++|+|||++...
T Consensus 117 ~~lH~~~i~H~dl~p~nil~~~~--~~~kl~dfg~~~~~ 153 (291)
T cd07844 117 AYCHQRRVLHRDLKPQNLLISER--GELKLADFGLARAK 153 (291)
T ss_pred HHHHhCCeecccCCHHHEEEcCC--CCEEECcccccccc
Confidence 88999999999999999999865 89999999998654
No 230
>cd05039 PTKc_Csk_like Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk
Probab=99.11 E-value=3.7e-10 Score=122.31 Aligned_cols=139 Identities=19% Similarity=0.195 Sum_probs=92.9
Q ss_pred cccccccccEEEEEEecCCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCcHHHHH
Q 002039 124 TPLATASIAQVHRATLVDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEAE 203 (977)
Q Consensus 124 ~piasaSigqV~~A~l~~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea~ 203 (977)
+.+|.|++|.||+|.. .|+.||||..+.... . . + .+.+|..
T Consensus 12 ~~ig~g~~g~v~~~~~-~~~~v~iK~~~~~~~-~----~---~------------------------------~~~~e~~ 52 (256)
T cd05039 12 ATIGKGEFGDVMLGDY-RGQKVAVKCLKDDST-A----A---Q------------------------------AFLAEAS 52 (256)
T ss_pred eeeecCCCceEEEEEe-cCcEEEEEEeccchh-H----H---H------------------------------HHHHHHH
Confidence 6799999999999987 489999998754321 0 0 0 1233444
Q ss_pred HHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeee-cCCceEEeeccCCCCCCChHHHHhc-CCCHHHHHHHHHHHH--H
Q 002039 204 NTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAF-GVNKQKVVEEITRAY--A 279 (977)
Q Consensus 204 n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLVmE~i~G~~L~~~~~~~~~-~~~~~~l~~~l~~~~--l 279 (977)
.+.++.+ ..-+.+...+. ....++||||++|.+|.+....... ......+...+.+++ +
T Consensus 53 ~l~~l~~-----------------~~i~~~~~~~~~~~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l 115 (256)
T cd05039 53 VMTTLRH-----------------PNLVQLLGVVLQGNPLYIVTEYMAKGSLVDYLRSRGRAVITLAQQLGFALDVCEGM 115 (256)
T ss_pred HHHhcCC-----------------cceeeeEEEEcCCCCeEEEEEecCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHH
Confidence 4333321 01122222222 5667899999999999876432211 244444444444443 6
Q ss_pred HHHHhcCccccCCCCCCeEEccCCCCceEEEecccccccCH
Q 002039 280 HQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 320 (977)
Q Consensus 280 ~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 320 (977)
..+|..|++|+|+||+||+++.+ +.++|+|||.+.....
T Consensus 116 ~~lh~~~i~H~di~p~Nili~~~--~~~~l~d~g~~~~~~~ 154 (256)
T cd05039 116 EYLEEKNFVHRDLAARNVLVSED--LVAKVSDFGLAKEASQ 154 (256)
T ss_pred HHHHhCCccchhcccceEEEeCC--CCEEEccccccccccc
Confidence 78999999999999999999855 8999999999887743
No 231
>cd05077 PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Janus kinase 1. Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic dom
Probab=99.11 E-value=3.2e-10 Score=123.73 Aligned_cols=80 Identities=13% Similarity=0.078 Sum_probs=58.0
Q ss_pred cCCceEEeeccCCCCCCChHHHHhcCCCHHHHHHHHHHHH--HHHHHhcCccccCCCCCCeEEccCCC-----CceEEEe
Q 002039 239 SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPP-----HRPILLD 311 (977)
Q Consensus 239 ~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~-----g~i~LiD 311 (977)
....++||||++|.+|..+.......++...+...+.++. +..+|..|++|+|+||.|||++.++. ..++++|
T Consensus 76 ~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dlkp~Nill~~~~~~~~~~~~~~l~d 155 (262)
T cd05077 76 DVENIMVEEFVEFGPLDLFMHRKSDVLTTPWKFKVAKQLASALSYLEDKDLVHGNVCTKNILLAREGIDGECGPFIKLSD 155 (262)
T ss_pred CCCCEEEEecccCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhhhCCeECCCCCcccEEEecCCccCCCCceeEeCC
Confidence 4567999999999988766432222345555555444444 78889999999999999999975421 1389999
Q ss_pred ccccccc
Q 002039 312 FGLTKKL 318 (977)
Q Consensus 312 FG~~~~l 318 (977)
||++..+
T Consensus 156 ~g~~~~~ 162 (262)
T cd05077 156 PGIPITV 162 (262)
T ss_pred CCCCccc
Confidence 9987655
No 232
>cd06658 STKc_PAK5 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly express
Probab=99.11 E-value=1.5e-10 Score=128.42 Aligned_cols=77 Identities=22% Similarity=0.361 Sum_probs=59.5
Q ss_pred cCCceEEeeccCCCCCCChHHHHhcCCCHHHHHHHHHHHH--HHHHHhcCccccCCCCCCeEEccCCCCceEEEeccccc
Q 002039 239 SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTK 316 (977)
Q Consensus 239 ~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~ 316 (977)
....++||||++|.+|.++. .....+...+...+.+++ +..+|..|++|+|++|.||+++.+ +.++|+|||++.
T Consensus 91 ~~~~~lv~e~~~~~~L~~~~--~~~~l~~~~~~~~~~qi~~~l~~LH~~~ivH~dlkp~Nill~~~--~~~kL~dfg~~~ 166 (292)
T cd06658 91 GDELWVVMEFLEGGALTDIV--THTRMNEEQIATVCLSVLRALSYLHNQGVIHRDIKSDSILLTSD--GRIKLSDFGFCA 166 (292)
T ss_pred CCeEEEEEeCCCCCcHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHHCCEeecCCCHHHEEEcCC--CCEEEccCcchh
Confidence 34568999999999887763 233345555555555544 788999999999999999999865 899999999886
Q ss_pred ccC
Q 002039 317 KLS 319 (977)
Q Consensus 317 ~l~ 319 (977)
.+.
T Consensus 167 ~~~ 169 (292)
T cd06658 167 QVS 169 (292)
T ss_pred hcc
Confidence 553
No 233
>cd06654 STKc_PAK1 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=99.10 E-value=2.4e-10 Score=127.01 Aligned_cols=139 Identities=14% Similarity=0.162 Sum_probs=92.7
Q ss_pred cccccccccEEEEEEe-cCCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCcHHHH
Q 002039 124 TPLATASIAQVHRATL-VDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (977)
Q Consensus 124 ~piasaSigqV~~A~l-~~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea 202 (977)
+.+|.|++|.||+|+. .+|+.|+||......... .-.+.+|.
T Consensus 26 ~~lg~g~~~~v~~~~~~~~~~~v~ik~~~~~~~~~-------------------------------------~~~~~~e~ 68 (296)
T cd06654 26 EKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPK-------------------------------------KELIINEI 68 (296)
T ss_pred EEecCCCCeEEEEEEECCCCcEEEEEEEecCCcch-------------------------------------HHHHHHHH
Confidence 5699999999999996 478999999764321110 00123344
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeee-cCCceEEeeccCCCCCCChHHHHhcCCCHHHHHHHHHHHH--H
Q 002039 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--A 279 (977)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~--l 279 (977)
..+..+.+ ..-+.+...+. ....++||||++|.+|.++.. ....+...+...+.++. +
T Consensus 69 ~~l~~~~h-----------------~~v~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~--~~~~~~~~~~~i~~ql~~aL 129 (296)
T cd06654 69 LVMRENKN-----------------PNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVT--ETCMDEGQIAAVCRECLQAL 129 (296)
T ss_pred HHHHhCCC-----------------CCEeeEEEEEEeCCEEEEeecccCCCCHHHHHH--hcCCCHHHHHHHHHHHHHHH
Confidence 43333211 01112222222 456789999999999987642 33345555555444443 6
Q ss_pred HHHHhcCccccCCCCCCeEEccCCCCceEEEecccccccCH
Q 002039 280 HQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 320 (977)
Q Consensus 280 ~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 320 (977)
..+|..|++|+|++|.||+++.+ +.++|+|||++..+..
T Consensus 130 ~~LH~~gi~H~dLkp~Nill~~~--~~~kl~dfg~~~~~~~ 168 (296)
T cd06654 130 EFLHSNQVIHRDIKSDNILLGMD--GSVKLTDFGFCAQITP 168 (296)
T ss_pred HHHHHCCcccCCCCHHHEEEcCC--CCEEECccccchhccc
Confidence 78899999999999999999865 8899999999876644
No 234
>cd08224 STKc_Nek6_Nek7 Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may a
Probab=99.10 E-value=2.6e-10 Score=123.99 Aligned_cols=144 Identities=17% Similarity=0.135 Sum_probs=93.1
Q ss_pred cccccccccEEEEEEec-CCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCcHHHH
Q 002039 124 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (977)
Q Consensus 124 ~piasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea 202 (977)
+.||.|++|.||+|... +|+.||+|+.++..... .. ..-++.+|.
T Consensus 8 ~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~----~~------------------------------~~~~~~~ei 53 (267)
T cd08224 8 KKIGKGQFSVVYKAICLLDGRVVALKKVQIFEMMD----AK------------------------------ARQDCLKEI 53 (267)
T ss_pred eeeccCCceEEEEEEEcCCCCEEEEEEeecccccc----hh------------------------------hHHHHHHHH
Confidence 57999999999999986 89999999865311000 00 001233444
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeee-cCCceEEeeccCCCCCCChHHHH---hcCCCHHHHHHHHHHHH
Q 002039 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLE---AFGVNKQKVVEEITRAY 278 (977)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLVmE~i~G~~L~~~~~~~---~~~~~~~~l~~~l~~~~ 278 (977)
+.+.++.+ ..-+.+...+. ....++||||++|.+|.++.... ...+....+...+.+++
T Consensus 54 ~~l~~~~~-----------------~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~ 116 (267)
T cd08224 54 DLLKQLDH-----------------PNVIKYLASFIENNELNIVLELADAGDLSRMIKHFKKQKRLIPERTIWKYFVQLC 116 (267)
T ss_pred HHHHhCCC-----------------CCeeeeeeeeecCCeEEEEEecCCCCCHHHHHHHhcccCCCcCHHHHHHHHHHHH
Confidence 44333321 00112222222 34568999999999987764311 12234455555555544
Q ss_pred --HHHHHhcCccccCCCCCCeEEccCCCCceEEEecccccccCH
Q 002039 279 --AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 320 (977)
Q Consensus 279 --l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 320 (977)
+..+|..|++|+|++|.||+++.+ +.++|+|||++..+..
T Consensus 117 ~~l~~lh~~~i~h~dl~p~nil~~~~--~~~~l~d~~~~~~~~~ 158 (267)
T cd08224 117 SALEHMHSKRIMHRDIKPANVFITAT--GVVKLGDLGLGRFFSS 158 (267)
T ss_pred HHHHHHHhCCEecCCcChhhEEECCC--CcEEEeccceeeeccC
Confidence 678899999999999999999865 8899999999876643
No 235
>cd06605 PKc_MAPKK Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity
Probab=99.10 E-value=2.6e-10 Score=123.92 Aligned_cols=143 Identities=17% Similarity=0.174 Sum_probs=93.8
Q ss_pred cccccccccEEEEEEec-CCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCcHHHH
Q 002039 124 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (977)
Q Consensus 124 ~piasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea 202 (977)
+.||.|++|.||+|..+ +++.|++|+.......... -.+.+|.
T Consensus 7 ~~ig~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~------------------------------------~~~~~e~ 50 (265)
T cd06605 7 GELGAGNSGVVSKVLHRPTGKIMAVKTIRLEINEAIQ------------------------------------KQILREL 50 (265)
T ss_pred HHhcCCCCeEEEEEEEcCCCcEEEEEEEecccChHHH------------------------------------HHHHHHH
Confidence 57999999999999985 7999999987654322110 0122333
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeee-cCCceEEeeccCCCCCCChHHHHhcCCCHHHHHHHHHHHH--H
Q 002039 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--A 279 (977)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~--l 279 (977)
..+.++.+ ..-+.+...+. ....+|+|||++|.+|.++.......++...+...+.+++ +
T Consensus 51 ~~l~~~~~-----------------~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l 113 (265)
T cd06605 51 DILHKCNS-----------------PYIVGFYGAFYNNGDISICMEYMDGGSLDKILKEVQGRIPERILGKIAVAVLKGL 113 (265)
T ss_pred HHHHHCCC-----------------CchhhhheeeecCCEEEEEEEecCCCcHHHHHHHccCCCCHHHHHHHHHHHHHHH
Confidence 33333211 00111111121 3556899999999999887543223344444444444443 6
Q ss_pred HHHHh-cCccccCCCCCCeEEccCCCCceEEEecccccccCHH
Q 002039 280 HQIYV-DGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSSS 321 (977)
Q Consensus 280 ~~i~~-~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~~ 321 (977)
..+|. .|++|+|+||+||+++.+ +.++|+|||.+..+...
T Consensus 114 ~~lH~~~~i~H~dl~~~ni~~~~~--~~~~l~d~g~~~~~~~~ 154 (265)
T cd06605 114 TYLHEKHKIIHRDVKPSNILVNSR--GQIKLCDFGVSGQLVNS 154 (265)
T ss_pred HHHcCCCCeecCCCCHHHEEECCC--CCEEEeecccchhhHHH
Confidence 78899 999999999999999965 88999999998776543
No 236
>cd05577 STKc_GRK Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of
Probab=99.10 E-value=2.7e-10 Score=125.12 Aligned_cols=141 Identities=16% Similarity=0.148 Sum_probs=92.0
Q ss_pred cccccccEEEEEEe-cCCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCcHHHHHH
Q 002039 126 LATASIAQVHRATL-VDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEAEN 204 (977)
Q Consensus 126 iasaSigqV~~A~l-~~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea~n 204 (977)
||.|++|.||+|.. .+|+.||||+......... ..+..+..|.+.
T Consensus 1 lg~g~~g~vy~~~~~~~~~~~~ik~~~~~~~~~~----------------------------------~~~~~~~~e~~~ 46 (277)
T cd05577 1 LGKGGFGEVCACQVKATGKMYACKKLDKKRLKKR----------------------------------KGEQMALNEKKI 46 (277)
T ss_pred CCCCCceeEEEEEEcCCCcEEEEEEEehhhhhhh----------------------------------hhhHHHHHHHHH
Confidence 58999999999986 4799999998754221100 011123345555
Q ss_pred HHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeee-cCCceEEeeccCCCCCCChHHHHh-cCCCHHHHHHHHHHHH--HH
Q 002039 205 TRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLEA-FGVNKQKVVEEITRAY--AH 280 (977)
Q Consensus 205 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLVmE~i~G~~L~~~~~~~~-~~~~~~~l~~~l~~~~--l~ 280 (977)
+.++++ ..-+.+...+. ....+|||||++|.+|.+...... ..+....+...+.+++ +.
T Consensus 47 l~~l~~-----------------~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~ql~~~l~ 109 (277)
T cd05577 47 LEKVSS-----------------RFIVSLAYAFETKDDLCLVMTLMNGGDLKYHIYNVGEPGFPEARAIFYAAQIICGLE 109 (277)
T ss_pred HHhCCC-----------------CCEeeeeeEEecCCeEEEEEecCCCCcHHHHHHHcCcCCCCHHHHHHHHHHHHHHHH
Confidence 544421 11122222332 355789999999999987643222 1345555444444433 67
Q ss_pred HHHhcCccccCCCCCCeEEccCCCCceEEEecccccccC
Q 002039 281 QIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 319 (977)
Q Consensus 281 ~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~ 319 (977)
.+|..|++|+|++|.||+++.+ +.++|+|||.+..+.
T Consensus 110 ~lH~~~i~H~di~p~Nil~~~~--~~~~l~dfg~~~~~~ 146 (277)
T cd05577 110 HLHQRRIVYRDLKPENVLLDDH--GNVRISDLGLAVELK 146 (277)
T ss_pred HHHhCCcccCCCCHHHEEECCC--CCEEEccCcchhhhc
Confidence 8899999999999999999865 899999999876653
No 237
>COG3642 Mn2+-dependent serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.10 E-value=1.8e-09 Score=107.82 Aligned_cols=138 Identities=20% Similarity=0.286 Sum_probs=94.9
Q ss_pred cccccccccEEEEEEecCCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCcHHHHH
Q 002039 124 TPLATASIAQVHRATLVDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEAE 203 (977)
Q Consensus 124 ~piasaSigqV~~A~l~~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea~ 203 (977)
.+++.|.-+.++.+.. -|.++++|..-|.- |..+.+=+.++. -.-++||+
T Consensus 2 ~~i~~GAEa~i~~~~~-~g~~av~K~Ri~K~------------------------YR~p~LD~klrr-----~Rt~~Ear 51 (204)
T COG3642 2 DLIKQGAEAIIYLTDF-LGLPAVVKERIPKR------------------------YRHPELDEKLRR-----ERTRREAR 51 (204)
T ss_pred chhhCCcceeEEeeec-cCcceEEEeecCcc------------------------cCChHHHHHHHH-----HHHHHHHH
Confidence 3578888889999865 36679999764432 111111111111 13467899
Q ss_pred HHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeee--cCCceEEeeccCCCCCCChHHHHhcCCCHHHHHHHHHHHHHHH
Q 002039 204 NTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ--SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAYAHQ 281 (977)
Q Consensus 204 n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~--~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~l~~ 281 (977)
.+.+++. .+|.+|.+|. .....|||||++|..|.+... .. ...+.+.+-.. +.-
T Consensus 52 il~~a~~------------------~GV~~P~v~dvD~~~~~I~me~I~G~~lkd~l~--~~---~~~~~r~vG~~-vg~ 107 (204)
T COG3642 52 ILAKARE------------------AGVPVPIVYDVDPDNGLIVMEYIEGELLKDALE--EA---RPDLLREVGRL-VGK 107 (204)
T ss_pred HHHHHHH------------------cCCCCCeEEEEcCCCCEEEEEEeCChhHHHHHH--hc---chHHHHHHHHH-HHH
Confidence 9888765 2688999997 566689999999999887632 21 12334433333 456
Q ss_pred HHhcCccccCCCCCCeEEccCCCCceEEEeccccccc
Q 002039 282 IYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKL 318 (977)
Q Consensus 282 i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l 318 (977)
+|..||+|+||-+.||++.. +++.+||||+...-
T Consensus 108 lH~~givHGDLTtsNiIl~~---~~i~~IDfGLg~~s 141 (204)
T COG3642 108 LHKAGIVHGDLTTSNIILSG---GRIYFIDFGLGEFS 141 (204)
T ss_pred HHhcCeecCCCccceEEEeC---CcEEEEECCccccc
Confidence 79999999999999999973 46999999997643
No 238
>cd06627 STKc_Cdc7_like Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast
Probab=99.10 E-value=4e-10 Score=121.29 Aligned_cols=144 Identities=19% Similarity=0.151 Sum_probs=95.6
Q ss_pred cccccccccEEEEEEec-CCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCcHHHH
Q 002039 124 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (977)
Q Consensus 124 ~piasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea 202 (977)
++||+|++|.||+|+.+ +|+.|+||........ ..+. + ++.+|+
T Consensus 6 ~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~--~~~~-----------------------~----------~~~~e~ 50 (254)
T cd06627 6 DLIGRGAFGVVYKGLNLETGDFVAIKQISLEKIK--EEAL-----------------------K----------SIMQEI 50 (254)
T ss_pred eEEcccCCeEEEEEEEcCCCcEEEEEEecccccC--HHHH-----------------------H----------HHHHHH
Confidence 68999999999999875 7899999987643211 0000 0 233444
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeee-cCCceEEeeccCCCCCCChHHHHhcCCCHHHHHHHHHHHH--H
Q 002039 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--A 279 (977)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~--l 279 (977)
+.+.++++ ...+.+..... ....+++|||++|.+|.++.... ...+...+...+.+++ +
T Consensus 51 ~~l~~l~~-----------------~~i~~~~~~~~~~~~~~~v~e~~~~~~L~~~~~~~-~~l~~~~~~~~~~~i~~~l 112 (254)
T cd06627 51 DLLKNLKH-----------------PNIVKYIGSIETSDSLYIILEYAENGSLRQIIKKF-GPFPESLVAVYVYQVLQGL 112 (254)
T ss_pred HHHHhCCC-----------------CCccEEEEEEEeCCEEEEEEecCCCCcHHHHHHhc-cCCCHHHHHHHHHHHHHHH
Confidence 44444321 00112222222 45568999999999988764322 3345555444444444 6
Q ss_pred HHHHhcCccccCCCCCCeEEccCCCCceEEEecccccccCHHH
Q 002039 280 HQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSSSM 322 (977)
Q Consensus 280 ~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~~~ 322 (977)
..+|..|++|+|++|+||+++.+ +.++|+|||.+..+....
T Consensus 113 ~~lH~~~i~H~dl~p~ni~i~~~--~~~~l~d~~~~~~~~~~~ 153 (254)
T cd06627 113 AYLHEQGVIHRDIKAANILTTKD--GVVKLADFGVATKLNDVS 153 (254)
T ss_pred HHHhhCCcccCCCCHHHEEECCC--CCEEEeccccceecCCCc
Confidence 78999999999999999999864 899999999998876543
No 239
>cd05075 PTKc_Axl Catalytic domain of the Protein Tyrosine Kinase, Axl. Protein Tyrosine Kinase (PTK) family; Axl; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl is widely expressed in a variety of organs and cells including epithelial, mesenchymal, hematopoietic, as well as non-transfor
Probab=99.10 E-value=4.4e-10 Score=122.79 Aligned_cols=78 Identities=23% Similarity=0.286 Sum_probs=57.9
Q ss_pred CceEEeeccCCCCCCChHHHHh-----cCCCHHHHHHHHHHHH--HHHHHhcCccccCCCCCCeEEccCCCCceEEEecc
Q 002039 241 ETVLILEFMDGIRLNDCESLEA-----FGVNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFG 313 (977)
Q Consensus 241 ~~vLVmE~i~G~~L~~~~~~~~-----~~~~~~~l~~~l~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG 313 (977)
..+++|||++|.+|.+...... ..++...+...+.++. +..+|..|++|+|+||.|||++.+ +.++|+|||
T Consensus 80 ~~~~v~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~Nil~~~~--~~~kl~Dfg 157 (272)
T cd05075 80 SPVVILPFMKHGDLHSFLLYSRLGDCPQYLPTQMLVKFMTDIASGMEYLSSKSFIHRDLAARNCMLNEN--MNVCVADFG 157 (272)
T ss_pred CcEEEEEeCCCCcHHHHHHHhcccCCcccCCHHHHHHHHHHHHHHHHHHHHCCeeccccchhheEEcCC--CCEEECCCC
Confidence 4589999999998876643221 1234444444444443 788999999999999999999865 889999999
Q ss_pred cccccCH
Q 002039 314 LTKKLSS 320 (977)
Q Consensus 314 ~~~~l~~ 320 (977)
++..+..
T Consensus 158 ~~~~~~~ 164 (272)
T cd05075 158 LSKKIYN 164 (272)
T ss_pred cccccCc
Confidence 9887643
No 240
>cd06659 STKc_PAK6 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role i
Probab=99.10 E-value=3.2e-10 Score=126.16 Aligned_cols=78 Identities=22% Similarity=0.356 Sum_probs=59.5
Q ss_pred cCCceEEeeccCCCCCCChHHHHhcCCCHHHHHHHHHHHH--HHHHHhcCccccCCCCCCeEEccCCCCceEEEeccccc
Q 002039 239 SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTK 316 (977)
Q Consensus 239 ~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~ 316 (977)
....+++|||++|.+|.+.. ....++...+...+.+++ +..+|..|++|+|++|+||+++.+ +.++|+|||++.
T Consensus 90 ~~~~~iv~e~~~~~~L~~~~--~~~~~~~~~~~~~~~qi~~~L~~LH~~~ivH~dl~p~Nill~~~--~~~kL~dfg~~~ 165 (297)
T cd06659 90 GEELWVLMEFLQGGALTDIV--SQTRLNEEQIATVCESVLQALCYLHSQGVIHRDIKSDSILLTLD--GRVKLSDFGFCA 165 (297)
T ss_pred CCeEEEEEecCCCCCHHHHH--hhcCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHeEEccC--CcEEEeechhHh
Confidence 35568999999999887653 233445555555444444 778899999999999999999865 899999999987
Q ss_pred ccCH
Q 002039 317 KLSS 320 (977)
Q Consensus 317 ~l~~ 320 (977)
.+..
T Consensus 166 ~~~~ 169 (297)
T cd06659 166 QISK 169 (297)
T ss_pred hccc
Confidence 6543
No 241
>cd06632 STKc_MEKK1_plant Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1. Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidops
Probab=99.10 E-value=3.6e-10 Score=122.09 Aligned_cols=146 Identities=15% Similarity=0.089 Sum_probs=91.9
Q ss_pred ccccccccccEEEEEEec-CCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCcHHH
Q 002039 123 ETPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSE 201 (977)
Q Consensus 123 ~~piasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~E 201 (977)
.+.||+|++|+||+|+.+ +|+.|+||+...........+ ..+ .+.+|
T Consensus 5 ~~~ig~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~----------------------~~~----------~~~~e 52 (258)
T cd06632 5 GELLGSGSFGSVYEGLNLDDGDFFAVKEVSLADDGQTGQE----------------------AVK----------QLEQE 52 (258)
T ss_pred cceeeecCCceEEEEEEcCCCcEEEEEEEEEccccccchH----------------------HHH----------HHHHH
Confidence 467999999999999986 899999998754221100000 000 12233
Q ss_pred HHHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeee-cCCceEEeeccCCCCCCChHHHHhcCCCHHHHHHHHHHHH--
Q 002039 202 AENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY-- 278 (977)
Q Consensus 202 a~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~-- 278 (977)
..-+.++.+ ..-+.+..... ....+++|||++|.+|.++... ....+...+...+.+++
T Consensus 53 ~~~l~~~~h-----------------~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~-~~~~~~~~~~~~~~~i~~~ 114 (258)
T cd06632 53 IALLSKLQH-----------------PNIVQYLGTEREEDNLYIFLELVPGGSLAKLLKK-YGSFPEPVIRLYTRQILLG 114 (258)
T ss_pred HHHHHhcCC-----------------CCchheeeeEecCCeEEEEEEecCCCcHHHHHHh-cCCCCHHHHHHHHHHHHHH
Confidence 333333321 00111222222 3456899999999998876432 12244444433333333
Q ss_pred HHHHHhcCccccCCCCCCeEEccCCCCceEEEecccccccCH
Q 002039 279 AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 320 (977)
Q Consensus 279 l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 320 (977)
+..+|..|++|+|++|.||+++.+ +.++|+|||++..+..
T Consensus 115 l~~lH~~~i~H~dl~~~ni~~~~~--~~~kl~d~~~~~~~~~ 154 (258)
T cd06632 115 LEYLHDRNTVHRDIKGANILVDTN--GVVKLADFGMAKQVVE 154 (258)
T ss_pred HHHHHHCCcccCCCCHHHEEECCC--CCEEEccCccceeccc
Confidence 678899999999999999999865 8999999999877644
No 242
>cd05038 PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases. Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by aut
Probab=99.10 E-value=3.5e-10 Score=124.15 Aligned_cols=138 Identities=21% Similarity=0.224 Sum_probs=93.8
Q ss_pred cccccccccEEEEEEec-----CCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCc
Q 002039 124 TPLATASIAQVHRATLV-----DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDF 198 (977)
Q Consensus 124 ~piasaSigqV~~A~l~-----~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~ 198 (977)
+.||.|++|.||+|+.. +++.||||+.++...... +-+|
T Consensus 10 ~~ig~g~~~~v~~~~~~~~~~~~~~~~avK~~~~~~~~~~------------------------------------~~~~ 53 (284)
T cd05038 10 KQLGEGHFGKVELCRYDPLGDNTGEQVAVKSLNHSGEEQH------------------------------------RSDF 53 (284)
T ss_pred eeeccCCCeeEEEeeecCCCCCCceEEEEEEeccccchHH------------------------------------HHHH
Confidence 67999999999999863 478999998875433200 0123
Q ss_pred HHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeee------cCCceEEeeccCCCCCCChHHHHhcCCCHHHHHH
Q 002039 199 NSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ------SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVE 272 (977)
Q Consensus 199 ~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~------~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~ 272 (977)
.+|.+.+..+.+ ..+++++. ....+++|||++|.+|.++........+...+..
T Consensus 54 ~~ei~~l~~l~~--------------------~~i~~~~~~~~~~~~~~~~lv~e~~~~~~l~~~l~~~~~~~~~~~~~~ 113 (284)
T cd05038 54 EREIEILRTLDH--------------------ENIVKYKGVCEKPGGRSLRLIMEYLPSGSLRDYLQRHRDQINLKRLLL 113 (284)
T ss_pred HHHHHHHHhCCC--------------------CChheEEeeeecCCCCceEEEEecCCCCCHHHHHHhCccccCHHHHHH
Confidence 344444333321 11222221 2246899999999999877543222355555555
Q ss_pred HHHHHH--HHHHHhcCccccCCCCCCeEEccCCCCceEEEecccccccC
Q 002039 273 EITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 319 (977)
Q Consensus 273 ~l~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~ 319 (977)
.+.++. +..+|..|++|+|+||.||+++.+ +.++|+|||++..+.
T Consensus 114 ~~~~l~~aL~~lH~~~i~H~dl~p~nil~~~~--~~~~l~dfg~~~~~~ 160 (284)
T cd05038 114 FSSQICKGMDYLGSQRYIHRDLAARNILVESE--DLVKISDFGLAKVLP 160 (284)
T ss_pred HHHHHHHHHHHHHhCCeecCCCCHHhEEEcCC--CCEEEcccccccccc
Confidence 444443 678899999999999999999865 899999999998876
No 243
>cd05054 PTKc_VEGFR Catalytic domain of the Protein Tyrosine Kinases, Vascular Endothelial Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor (VEGFR) subfamily; catalytic (c) domain. The VEGFR subfamily consists of VEGFR1 (Flt1), VEGFR2 (Flk1), VEGFR3 (Flt4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to recepto
Probab=99.09 E-value=3.7e-10 Score=128.21 Aligned_cols=52 Identities=15% Similarity=0.225 Sum_probs=40.9
Q ss_pred CHHHHHHHHHHHH--HHHHHhcCccccCCCCCCeEEccCCCCceEEEecccccccC
Q 002039 266 NKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 319 (977)
Q Consensus 266 ~~~~l~~~l~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~ 319 (977)
+...+...+.++. +..+|..|++|+|+||.|||++.+ +.++|+|||++..+.
T Consensus 171 ~~~~~~~~~~qi~~aL~~lH~~~ivHrDikp~Nill~~~--~~vkL~DfG~a~~~~ 224 (337)
T cd05054 171 TLEDLISYSFQVARGMEFLASRKCIHRDLAARNILLSEN--NVVKICDFGLARDIY 224 (337)
T ss_pred CHHHHHHHHHHHHHHHHHHHhCCeecCCCCcceEEEeCC--CcEEEeccccchhcc
Confidence 3344444444443 788999999999999999999865 889999999988764
No 244
>PF06176 WaaY: Lipopolysaccharide core biosynthesis protein (WaaY); InterPro: IPR009330 This family consists of several bacterial lipopolysaccharide core biosynthesis proteins (WaaY or RfaY). The waaY, waaQ, and waaP genes are located in the central operon of the waa (formerly rfa) locus on the chromosome of Escherichia coli. This locus contains genes whose products are involved in the assembly of the core region of the lipopolysaccharide molecule. WaaY is the enzyme that phosphorylates HepII in this system [].; GO: 0009244 lipopolysaccharide core region biosynthetic process
Probab=99.09 E-value=1e-09 Score=113.74 Aligned_cols=70 Identities=37% Similarity=0.716 Sum_probs=55.8
Q ss_pred cCCceEEeeccCCCCCCChHHHHhcCCCHHHHHHHHHHHHHHHHHhcCccccCCCCCCeEEccCCCCceEEEeccccccc
Q 002039 239 SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAYAHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKL 318 (977)
Q Consensus 239 ~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l 318 (977)
++..+|+|||++|.+|.+...+. +.+.+.+.+ .+.++|.+|++|+||||||++++. +.+.+|||+..+..
T Consensus 115 ~~~~~ll~EYIeG~~l~d~~~i~------e~~~~ki~~-~ikqlH~~G~~HGD~hpgNFlv~~---~~i~iID~~~k~~~ 184 (229)
T PF06176_consen 115 TSSYVLLMEYIEGVELNDIEDID------EDLAEKIVE-AIKQLHKHGFYHGDPHPGNFLVSN---NGIRIIDTQGKRMS 184 (229)
T ss_pred eeEEEEEEEEecCeecccchhcC------HHHHHHHHH-HHHHHHHcCCccCCCCcCcEEEEC---CcEEEEECcccccc
Confidence 56678999999999999875432 234444444 479999999999999999999984 46999999987754
No 245
>cd05065 PTKc_EphR_B Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; class EphB receptors; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephr
Probab=99.09 E-value=4.3e-10 Score=122.81 Aligned_cols=141 Identities=21% Similarity=0.207 Sum_probs=93.0
Q ss_pred cccccccccEEEEEEec-CC---CEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCcH
Q 002039 124 TPLATASIAQVHRATLV-DG---RQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFN 199 (977)
Q Consensus 124 ~piasaSigqV~~A~l~-~G---~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~ 199 (977)
+-||.|++|.||+|+++ +| ..||||+.......... -+|.
T Consensus 10 ~~lg~g~~g~vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~------------------------------------~~~~ 53 (269)
T cd05065 10 EVIGAGEFGEVCRGRLKLPGKREIFVAIKTLKSGYTEKQR------------------------------------RDFL 53 (269)
T ss_pred eEecCCCCCeEEEEEEecCCCCceeEEEEEcCCCCCHHHH------------------------------------HHHH
Confidence 56899999999999974 34 36999987654221100 0234
Q ss_pred HHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeee-cCCceEEeeccCCCCCCChHHHHhcCCCHHHHHHHHHHHH
Q 002039 200 SEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY 278 (977)
Q Consensus 200 ~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~ 278 (977)
.|+..+..+.+ ..-+.+...+. ....++||||++|.+|.++.......++...+...+.+++
T Consensus 54 ~e~~~l~~l~h-----------------~ni~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~l~ 116 (269)
T cd05065 54 SEASIMGQFDH-----------------PNIIHLEGVVTKSRPVMIITEFMENGALDSFLRQNDGQFTVIQLVGMLRGIA 116 (269)
T ss_pred HHHHHHHhCCC-----------------cCcceEEEEECCCCceEEEEecCCCCcHHHHHhhCCCCCCHHHHHHHHHHHH
Confidence 45544444321 11122222222 4556899999999999876543333345555555444443
Q ss_pred --HHHHHhcCccccCCCCCCeEEccCCCCceEEEecccccccC
Q 002039 279 --AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 319 (977)
Q Consensus 279 --l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~ 319 (977)
+..+|..|++|+|+||.||+++.+ +.++|+|||.+..+.
T Consensus 117 ~al~~lH~~g~~H~dl~p~nili~~~--~~~kl~dfg~~~~~~ 157 (269)
T cd05065 117 AGMKYLSEMNYVHRDLAARNILVNSN--LVCKVSDFGLSRFLE 157 (269)
T ss_pred HHHHHHHHCCEeecccChheEEEcCC--CcEEECCCccccccc
Confidence 678899999999999999999854 889999999987654
No 246
>cd05101 PTKc_FGFR2 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 2 (FGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR2 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=99.09 E-value=5.2e-10 Score=124.69 Aligned_cols=80 Identities=15% Similarity=0.198 Sum_probs=58.3
Q ss_pred cCCceEEeeccCCCCCCChHHHHh---------------cCCCHHHHHHHHHHHH--HHHHHhcCccccCCCCCCeEEcc
Q 002039 239 SSETVLILEFMDGIRLNDCESLEA---------------FGVNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSK 301 (977)
Q Consensus 239 ~~~~vLVmE~i~G~~L~~~~~~~~---------------~~~~~~~l~~~l~~~~--l~~i~~~G~~H~D~hPgNIlv~~ 301 (977)
....+|+|||++|.+|.++..... ..++...+...+.+++ +..+|..|++|+|+||.||+++.
T Consensus 93 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~givH~dlkp~Nili~~ 172 (304)
T cd05101 93 DGPLYVIVEYASKGNLREYLRARRPPGMEYSYDIARVPDEQMTFKDLVSCTYQVARGMEYLASQKCIHRDLAARNVLVTE 172 (304)
T ss_pred CCceEEEEecCCCCcHHHHHHhcCCcccccccccccCCcccccHHHHHHHHHHHHHHHHHHHHCCeeecccccceEEEcC
Confidence 345689999999999887643211 1122333343333433 67899999999999999999985
Q ss_pred CCCCceEEEecccccccCH
Q 002039 302 DPPHRPILLDFGLTKKLSS 320 (977)
Q Consensus 302 ~~~g~i~LiDFG~~~~l~~ 320 (977)
+ +.++|+|||.+..+..
T Consensus 173 ~--~~~kl~D~g~~~~~~~ 189 (304)
T cd05101 173 N--NVMKIADFGLARDVNN 189 (304)
T ss_pred C--CcEEECCCccceeccc
Confidence 5 8999999999887643
No 247
>cd05579 STKc_MAST_like Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert re
Probab=99.09 E-value=3.7e-10 Score=122.31 Aligned_cols=76 Identities=21% Similarity=0.281 Sum_probs=57.7
Q ss_pred CCceEEeeccCCCCCCChHHHHhcCCCHHHHHHHHHHHH--HHHHHhcCccccCCCCCCeEEccCCCCceEEEecccccc
Q 002039 240 SETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKK 317 (977)
Q Consensus 240 ~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~ 317 (977)
...+++|||++|.+|.++..-. ..++...+...+.+++ +..+|..|++|+|++|.||+++.+ +.++|+|||++..
T Consensus 66 ~~~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~i~~qi~~~L~~lH~~~i~H~di~~~nil~~~~--~~~~l~dfg~~~~ 142 (265)
T cd05579 66 KNLYLVMEYLPGGDLASLLENV-GSLDEDVARIYIAEIVLALEYLHSNGIIHRDLKPDNILIDSN--GHLKLTDFGLSKV 142 (265)
T ss_pred cEEEEEEecCCCCcHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHcCeecCCCCHHHeEEcCC--CCEEEEecccchh
Confidence 4468999999999997764321 2345555444444444 678899999999999999999965 8999999998765
Q ss_pred c
Q 002039 318 L 318 (977)
Q Consensus 318 l 318 (977)
.
T Consensus 143 ~ 143 (265)
T cd05579 143 G 143 (265)
T ss_pred c
Confidence 4
No 248
>PLN03225 Serine/threonine-protein kinase SNT7; Provisional
Probab=99.09 E-value=4e-10 Score=135.94 Aligned_cols=78 Identities=18% Similarity=0.273 Sum_probs=53.3
Q ss_pred CCceEEeeccCCCCCCChHHHHhcCCC-------------------HHHHHHHHHHHH--HHHHHhcCccccCCCCCCeE
Q 002039 240 SETVLILEFMDGIRLNDCESLEAFGVN-------------------KQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFL 298 (977)
Q Consensus 240 ~~~vLVmE~i~G~~L~~~~~~~~~~~~-------------------~~~l~~~l~~~~--l~~i~~~G~~H~D~hPgNIl 298 (977)
...+|||||+++.+|.++......... ...+...+.+++ +..+|..||+|||+||.|||
T Consensus 208 ~~~~LV~ey~~~gsL~~~l~~~~~~~~v~~~l~~~~~~l~~~~~r~~~~i~~i~~qll~aL~yLH~~gIiHRDLKP~NIL 287 (566)
T PLN03225 208 DEYWLVWRYEGESTLADLMQSKEFPYNVEPYLLGKVQDLPKGLERENKIIQTIMRQILFALDGLHSTGIVHRDVKPQNII 287 (566)
T ss_pred CceEEEEEecCCCcHHHHHHhcCCchhHHHHhccchhhccccchhhHHHHHHHHHHHHHHHHHHHHCCEEeCcCCHHHEE
Confidence 456899999999988776431110000 011112222222 77899999999999999999
Q ss_pred EccCCCCceEEEeccccccc
Q 002039 299 VSKDPPHRPILLDFGLTKKL 318 (977)
Q Consensus 299 v~~~~~g~i~LiDFG~~~~l 318 (977)
++.+ ++.++|+|||+++.+
T Consensus 288 l~~~-~~~~KL~DFGlA~~l 306 (566)
T PLN03225 288 FSEG-SGSFKIIDLGAAADL 306 (566)
T ss_pred EeCC-CCcEEEEeCCCcccc
Confidence 9853 478999999999755
No 249
>cd05052 PTKc_Abl Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase. Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays
Probab=99.09 E-value=4.1e-10 Score=122.64 Aligned_cols=140 Identities=21% Similarity=0.186 Sum_probs=92.4
Q ss_pred cccccccccEEEEEEec-CCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCcHHHH
Q 002039 124 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (977)
Q Consensus 124 ~piasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea 202 (977)
+.||.|++|.||+|..+ +++.||+|+...+... . . ++.+|.
T Consensus 12 ~~ig~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~-----~-----------------------~----------~~~~e~ 53 (263)
T cd05052 12 HKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-----V-----------------------E----------EFLKEA 53 (263)
T ss_pred eecCCcccceEEEEEEecCCceEEEEEecCCchH-----H-----------------------H----------HHHHHH
Confidence 57999999999999974 6899999986543110 0 0 123344
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeee-cCCceEEeeccCCCCCCChHHHHh-cCCCHHHHHHHHHHHH--
Q 002039 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLEA-FGVNKQKVVEEITRAY-- 278 (977)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLVmE~i~G~~L~~~~~~~~-~~~~~~~l~~~l~~~~-- 278 (977)
+.+.++.+ ..-+.+...+. ....+++|||++|.+|.+...... ...+...+...+.+++
T Consensus 54 ~~l~~l~h-----------------~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~l~~~~~~~~~~ql~~~ 116 (263)
T cd05052 54 AVMKEIKH-----------------PNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSA 116 (263)
T ss_pred HHHHhCCC-----------------CChhheEEEEcCCCCcEEEEEeCCCCcHHHHHHhCCCCCCCHHHHHHHHHHHHHH
Confidence 44433321 01112222222 455689999999999987643211 1244444444444433
Q ss_pred HHHHHhcCccccCCCCCCeEEccCCCCceEEEecccccccCH
Q 002039 279 AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 320 (977)
Q Consensus 279 l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 320 (977)
+..+|..|++|+|+||.||+++++ +.++|+|||++..+..
T Consensus 117 l~~lH~~~i~H~dlkp~nil~~~~--~~~kl~df~~~~~~~~ 156 (263)
T cd05052 117 MEYLEKKNFIHRDLAARNCLVGEN--HLVKVADFGLSRLMTG 156 (263)
T ss_pred HHHHHhCCEeecccCcceEEEcCC--CcEEeCCCcccccccc
Confidence 678899999999999999999865 8999999999877653
No 250
>cd05088 PTKc_Tie2 Catalytic domain of the Protein Tyrosine Kinase, Tie2. Protein Tyrosine Kinase (PTK) family; Tie2; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie2 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie2 is expressed mainly in endothelial cells and hematopoietic stem cells. It is also found in a subset of tumor-associated monocytes and eosinophils. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2. The binding of A
Probab=99.09 E-value=5.4e-10 Score=124.73 Aligned_cols=77 Identities=18% Similarity=0.200 Sum_probs=57.7
Q ss_pred cCCceEEeeccCCCCCCChHHHHh---------------cCCCHHHHHHHHHHHH--HHHHHhcCccccCCCCCCeEEcc
Q 002039 239 SSETVLILEFMDGIRLNDCESLEA---------------FGVNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSK 301 (977)
Q Consensus 239 ~~~~vLVmE~i~G~~L~~~~~~~~---------------~~~~~~~l~~~l~~~~--l~~i~~~G~~H~D~hPgNIlv~~ 301 (977)
....++||||++|.+|.++..... ..++...+...+.++. +..+|..|++|+|++|.|||++.
T Consensus 80 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~gi~H~dlkp~Nili~~ 159 (303)
T cd05088 80 RGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQFIHRDLAARNILVGE 159 (303)
T ss_pred CCCceEEEEeCCCCcHHHHHHhcccccccccccccccccCcCCHHHHHHHHHHHHHHHHHHHhCCccccccchheEEecC
Confidence 456799999999999877643211 1234444444444443 78889999999999999999986
Q ss_pred CCCCceEEEecccccc
Q 002039 302 DPPHRPILLDFGLTKK 317 (977)
Q Consensus 302 ~~~g~i~LiDFG~~~~ 317 (977)
+ +.++|+|||++..
T Consensus 160 ~--~~~kl~dfg~~~~ 173 (303)
T cd05088 160 N--YVAKIADFGLSRG 173 (303)
T ss_pred C--CcEEeCccccCcc
Confidence 5 8899999999864
No 251
>cd05611 STKc_Rim15_like Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a do
Probab=99.09 E-value=4.6e-10 Score=121.82 Aligned_cols=77 Identities=19% Similarity=0.301 Sum_probs=58.0
Q ss_pred cCCceEEeeccCCCCCCChHHHHhcCCCHHHHHHHHHHHH--HHHHHhcCccccCCCCCCeEEccCCCCceEEEeccccc
Q 002039 239 SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTK 316 (977)
Q Consensus 239 ~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~ 316 (977)
....++||||++|.+|.++... ....+...+...+.+++ +..+|..|++|+|++|.||+++.+ +.++|+|||++.
T Consensus 69 ~~~~~lv~e~~~~~~L~~~l~~-~~~~~~~~~~~i~~qi~~aL~~lH~~~i~H~dl~p~nil~~~~--~~~~l~dfg~~~ 145 (260)
T cd05611 69 KDYLYLVMEYLNGGDCASLIKT-LGGLPEDWAKQYIAEVVLGVEDLHQRGIIHRDIKPENLLIDQT--GHLKLTDFGLSR 145 (260)
T ss_pred CCeEEEEEeccCCCCHHHHHHH-cCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEECCC--CcEEEeecccce
Confidence 3456899999999999876432 12344444444444433 678999999999999999999865 889999999876
Q ss_pred cc
Q 002039 317 KL 318 (977)
Q Consensus 317 ~l 318 (977)
..
T Consensus 146 ~~ 147 (260)
T cd05611 146 NG 147 (260)
T ss_pred ec
Confidence 54
No 252
>PHA02988 hypothetical protein; Provisional
Probab=99.09 E-value=3.8e-10 Score=124.71 Aligned_cols=140 Identities=17% Similarity=0.189 Sum_probs=94.1
Q ss_pred ccccccccccEEEEEEecCCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCcHHHH
Q 002039 123 ETPLATASIAQVHRATLVDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (977)
Q Consensus 123 ~~piasaSigqV~~A~l~~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea 202 (977)
...++.|+++.||+|.. +|+.||||+.+...... ..+++ .|.+|+
T Consensus 25 ~~~i~~g~~~~v~~~~~-~~~~vavK~~~~~~~~~------------------------~~~~~----------~~~~E~ 69 (283)
T PHA02988 25 SVLIKENDQNSIYKGIF-NNKEVIIRTFKKFHKGH------------------------KVLID----------ITENEI 69 (283)
T ss_pred CeEEeeCCceEEEEEEE-CCEEEEEEecccccccc------------------------HHHHH----------HHHHHH
Confidence 45789999999999998 79999999875431100 00011 244566
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeee--------cCCceEEeeccCCCCCCChHHHHhcCCCHHHHHHHH
Q 002039 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ--------SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEI 274 (977)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~--------~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l 274 (977)
..+.++++ + .|.+++. ....+|||||++|++|.++.... ..++.......+
T Consensus 70 ~~l~~l~h------------------~--nIv~~~g~~~~~~~~~~~~~lv~Ey~~~g~L~~~l~~~-~~~~~~~~~~i~ 128 (283)
T PHA02988 70 KNLRRIDS------------------N--NILKIYGFIIDIVDDLPRLSLILEYCTRGYLREVLDKE-KDLSFKTKLDMA 128 (283)
T ss_pred HHHHhcCC------------------C--CEEEEeeeEEecccCCCceEEEEEeCCCCcHHHHHhhC-CCCChhHHHHHH
Confidence 66666533 1 2223321 23458999999999998875322 234444444444
Q ss_pred HHHH--HHHHHh-cCccccCCCCCCeEEccCCCCceEEEecccccccCH
Q 002039 275 TRAY--AHQIYV-DGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 320 (977)
Q Consensus 275 ~~~~--l~~i~~-~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 320 (977)
.++. +..+|. .|++|+|++|.||+++.+ +.++|+|||++..++.
T Consensus 129 ~~i~~~l~~lH~~~~~~Hrdlkp~nill~~~--~~~kl~dfg~~~~~~~ 175 (283)
T PHA02988 129 IDCCKGLYNLYKYTNKPYKNLTSVSFLVTEN--YKLKIICHGLEKILSS 175 (283)
T ss_pred HHHHHHHHHHHhcCCCCCCcCChhhEEECCC--CcEEEcccchHhhhcc
Confidence 4443 677887 599999999999999965 8999999999876543
No 253
>cd06612 STKc_MST1_2 Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a
Probab=99.09 E-value=5.1e-10 Score=120.91 Aligned_cols=140 Identities=16% Similarity=0.217 Sum_probs=96.2
Q ss_pred cccccccccEEEEEEec-CCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCcHHHH
Q 002039 124 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (977)
Q Consensus 124 ~piasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea 202 (977)
+.+++|++|.||+|+.+ +++.|++|....... . -++.+|.
T Consensus 9 ~~i~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~------~---------------------------------~~~~~e~ 49 (256)
T cd06612 9 EKLGEGSYGSVYKAIHKETGQVVAIKVVPVEED------L---------------------------------QEIIKEI 49 (256)
T ss_pred hhhcCCCCeEEEEEEEcCCCcEEEEEEeecHHH------H---------------------------------HHHHHHH
Confidence 56999999999999986 489999998653211 0 0233444
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeee-cCCceEEeeccCCCCCCChHHHHhcCCCHHHHHHHHHHHH--H
Q 002039 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--A 279 (977)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~--l 279 (977)
+.+.++.+ ...+.+...+. ....+++|||++|.+|.++.......++...+...+.+++ +
T Consensus 50 ~~~~~l~~-----------------~~i~~~~~~~~~~~~~~l~~e~~~~~~L~~~l~~~~~~l~~~~~~~~~~~l~~~l 112 (256)
T cd06612 50 SILKQCDS-----------------PYIVKYYGSYFKNTDLWIVMEYCGAGSVSDIMKITNKTLTEEEIAAILYQTLKGL 112 (256)
T ss_pred HHHHhCCC-----------------CcEeeeeeeeecCCcEEEEEecCCCCcHHHHHHhCccCCCHHHHHHHHHHHHHHH
Confidence 44444311 11122222222 4556899999999999887544344455555555555443 6
Q ss_pred HHHHhcCccccCCCCCCeEEccCCCCceEEEecccccccCHH
Q 002039 280 HQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSSS 321 (977)
Q Consensus 280 ~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~~ 321 (977)
..+|..|++|+|++|+||+++.+ +.++|+|||++..+...
T Consensus 113 ~~lh~~~i~H~dl~~~ni~~~~~--~~~~l~dfg~~~~~~~~ 152 (256)
T cd06612 113 EYLHSNKKIHRDIKAGNILLNEE--GQAKLADFGVSGQLTDT 152 (256)
T ss_pred HHHHHCCcccCCCCcceEEECCC--CcEEEcccccchhcccC
Confidence 78899999999999999999865 88999999998877543
No 254
>cd06619 PKc_MKK5 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5. Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that p
Probab=99.09 E-value=6.4e-10 Score=122.39 Aligned_cols=137 Identities=20% Similarity=0.194 Sum_probs=89.6
Q ss_pred cccccccccEEEEEEe-cCCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCcHHHH
Q 002039 124 TPLATASIAQVHRATL-VDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (977)
Q Consensus 124 ~piasaSigqV~~A~l-~~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea 202 (977)
+.||.|++|.||+|+. .+++.||||+...+..... +-.+.+|.
T Consensus 7 ~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~------------------------------------~~~~~~E~ 50 (279)
T cd06619 7 EILGHGNGGTVYKAYHLLTRRILAVKVIPLDITVEL------------------------------------QKQIMSEL 50 (279)
T ss_pred eeeccCCCeEEEEEEEcCCCcEEEEEEEecCCChHH------------------------------------HHHHHHHH
Confidence 5799999999999986 5889999998754321100 00233454
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeee-cCCceEEeeccCCCCCCChHHHHhcCCCHHHHHHHHHHHH--H
Q 002039 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--A 279 (977)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~--l 279 (977)
+.+.++.+ ..-+.+-..+. ....+|||||++|.++.... ..+...+...+.+++ +
T Consensus 51 ~~l~~l~h-----------------~~iv~~~~~~~~~~~~~lv~e~~~~~~l~~~~-----~~~~~~~~~~~~qi~~~l 108 (279)
T cd06619 51 EILYKCDS-----------------PYIIGFYGAFFVENRISICTEFMDGGSLDVYR-----KIPEHVLGRIAVAVVKGL 108 (279)
T ss_pred HHHHhCCC-----------------CCeeeEEEEEEECCEEEEEEecCCCCChHHhh-----cCCHHHHHHHHHHHHHHH
Confidence 44443321 01122222222 45568999999998886432 123333333333333 6
Q ss_pred HHHHhcCccccCCCCCCeEEccCCCCceEEEecccccccCH
Q 002039 280 HQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 320 (977)
Q Consensus 280 ~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 320 (977)
..+|..|++|+|+||.||+++.+ +.++|+|||++..+..
T Consensus 109 ~~lH~~~i~H~dlkp~Nill~~~--~~~~l~dfg~~~~~~~ 147 (279)
T cd06619 109 TYLWSLKILHRDVKPSNMLVNTR--GQVKLCDFGVSTQLVN 147 (279)
T ss_pred HHHHHCCEeeCCCCHHHEEECCC--CCEEEeeCCcceeccc
Confidence 78999999999999999999865 8999999999876643
No 255
>cd06638 STKc_myosinIIIA Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIA myosin. Serine/threonine kinases (STKs), class IIIA myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. In photoreceptor cells, they may also function as cargo carriers during light-dependent translocation of proteins such as transducin and arrestin. Class IIIA myosin is highly expressed in retina and in inner ear
Probab=99.09 E-value=5e-10 Score=123.39 Aligned_cols=141 Identities=16% Similarity=0.193 Sum_probs=89.4
Q ss_pred cccccccccEEEEEEec-CCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCcHHHH
Q 002039 124 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (977)
Q Consensus 124 ~piasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea 202 (977)
+.||.|++|.||+|+.+ +|+.||||+..+.... . -++.+|.
T Consensus 24 ~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~--~------------------------------------~~~~~e~ 65 (286)
T cd06638 24 ETIGKGTYGKVFKVLNKKNGSKAAVKILDPIHDI--D------------------------------------EEIEAEY 65 (286)
T ss_pred eeeccCCCcEEEEEEECCCCceeEEEeeccccch--H------------------------------------HHHHHHH
Confidence 67999999999999974 7899999986542110 0 0122344
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeee------cCCceEEeeccCCCCCCChHHHH---hcCCCHHHHHHH
Q 002039 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ------SSETVLILEFMDGIRLNDCESLE---AFGVNKQKVVEE 273 (977)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~------~~~~vLVmE~i~G~~L~~~~~~~---~~~~~~~~l~~~ 273 (977)
..+.++.+. ..-+.+...+. ....+|||||++|.+|.++.... ....+...+...
T Consensus 66 ~~l~~l~~h----------------~~i~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~ 129 (286)
T cd06638 66 NILKALSDH----------------PNVVKFYGMYYKKDVKNGDQLWLVLELCNGGSVTDLVKGFLKRGERMEEPIIAYI 129 (286)
T ss_pred HHHHHHhcC----------------CCeeeeeeeeeecccCCCCeEEEEEeecCCCCHHHHHHHhhccCccccHHHHHHH
Confidence 434343210 00112222221 23458999999999998764311 112333333333
Q ss_pred HHHHH--HHHHHhcCccccCCCCCCeEEccCCCCceEEEecccccccCH
Q 002039 274 ITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 320 (977)
Q Consensus 274 l~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 320 (977)
+.++. +..+|..|++|+|+||+||+++.+ +.++|+|||++..+..
T Consensus 130 ~~~i~~~l~~lH~~~i~H~dlkp~nili~~~--~~~kl~dfg~~~~~~~ 176 (286)
T cd06638 130 LHEALMGLQHLHVNKTIHRDVKGNNILLTTE--GGVKLVDFGVSAQLTS 176 (286)
T ss_pred HHHHHHHHHHHHhCCccccCCCHHhEEECCC--CCEEEccCCceeeccc
Confidence 33322 678899999999999999999865 7899999999877643
No 256
>cd06637 STKc_TNIK Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase. Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activ
Probab=99.08 E-value=4.2e-10 Score=122.91 Aligned_cols=149 Identities=15% Similarity=0.167 Sum_probs=94.0
Q ss_pred hhhcccccCccccccccccEEEEEEec-CCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhc
Q 002039 114 MGGMFMDFVETPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEA 192 (977)
Q Consensus 114 ~~~~f~~~d~~piasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l 192 (977)
+...|... +.||.|++|+||+|+.. +++.||||+....-..
T Consensus 4 ~~~~y~~~--~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~~~~------------------------------------ 45 (272)
T cd06637 4 PAGIFELV--ELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTGDE------------------------------------ 45 (272)
T ss_pred hhhhhhHH--HheeecCCeEEEEEEEcCCCcEEEEEEEEcCCcc------------------------------------
Confidence 44555443 56999999999999974 7899999987422110
Q ss_pred ccccCcHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeee-------cCCceEEeeccCCCCCCChHHHHh-cC
Q 002039 193 PKELDFNSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-------SSETVLILEFMDGIRLNDCESLEA-FG 264 (977)
Q Consensus 193 ~~Eld~~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-------~~~~vLVmE~i~G~~L~~~~~~~~-~~ 264 (977)
+.++.+|...+.++.+. ..-+.+...+. ....++||||+.|.+|.++..... ..
T Consensus 46 --~~~~~~e~~~l~~~~~h----------------~~i~~~~~~~~~~~~~~~~~~~~iv~e~~~~~~L~~~l~~~~~~~ 107 (272)
T cd06637 46 --EEEIKQEINMLKKYSHH----------------RNIATYYGAFIKKNPPGMDDQLWLVMEFCGAGSVTDLIKNTKGNT 107 (272)
T ss_pred --HHHHHHHHHHHHHhcCC----------------CCeeeEeeEEeecCCCCCCcEEEEEEEcCCCCcHHHHHHhccCCC
Confidence 01122333333333110 01122222221 123579999999999887643211 12
Q ss_pred CCHHHHHHHHHHHH--HHHHHhcCccccCCCCCCeEEccCCCCceEEEecccccccCH
Q 002039 265 VNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 320 (977)
Q Consensus 265 ~~~~~l~~~l~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 320 (977)
+....+...+.+++ +..+|..|++|+|+||+||+++.+ +.++|+|||++..+..
T Consensus 108 l~~~~~~~~~~qi~~~l~~LH~~~ivh~dl~~~nili~~~--~~~~l~Dfg~~~~~~~ 163 (272)
T cd06637 108 LKEEWIAYICREILRGLSHLHQHKVIHRDIKGQNVLLTEN--AEVKLVDFGVSAQLDR 163 (272)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHCCCccCCCCHHHEEECCC--CCEEEccCCCceeccc
Confidence 34444444444433 678999999999999999999865 7899999999876643
No 257
>cd08219 STKc_Nek3 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 3. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 3 (Nek3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek3 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek3 is primarily localized in the cytoplasm and shows no cell cycle-dependent changes in its activity. It is present in the axons of neurons and affects morphogenesis and polarity through its regulation of microtubule acetylation. Nek3 modulates the signaling of the prolactin receptor through its activati
Probab=99.08 E-value=6.9e-10 Score=120.10 Aligned_cols=142 Identities=15% Similarity=0.173 Sum_probs=92.8
Q ss_pred cccccccccEEEEEEec-CCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCcHHHH
Q 002039 124 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (977)
Q Consensus 124 ~piasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea 202 (977)
+.+|.|++|+||++... +|+.||+|..+-..... +. + ++.+|.
T Consensus 6 ~~lg~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~---~~-----------------------~----------~~~~e~ 49 (255)
T cd08219 6 RVVGEGSFGRALLVQHVNSDQKYAMKEIRLPKSSS---AV-----------------------E----------DSRKEA 49 (255)
T ss_pred EEeeccCCeEEEEEEEcCCCceEEEEEEEcCcchH---HH-----------------------H----------HHHHHH
Confidence 57999999999999974 78999999864211100 00 0 122333
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeee-cCCceEEeeccCCCCCCChHHHH-hcCCCHHHHHHHHHHHH--
Q 002039 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLE-AFGVNKQKVVEEITRAY-- 278 (977)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLVmE~i~G~~L~~~~~~~-~~~~~~~~l~~~l~~~~-- 278 (977)
..+.++.+ ..-+.+...+. ....++||||++|.+|.+..... ....+...+...+.++.
T Consensus 50 ~~l~~l~h-----------------~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~a 112 (255)
T cd08219 50 VLLAKMKH-----------------PNIVAFKESFEADGHLYIVMEYCDGGDLMQKIKLQRGKLFPEDTILQWFVQMCLG 112 (255)
T ss_pred HHHHhCCC-----------------CCcceEEEEEEECCEEEEEEeeCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHH
Confidence 33333221 11122223333 56678999999999887654321 12244555544444443
Q ss_pred HHHHHhcCccccCCCCCCeEEccCCCCceEEEecccccccCH
Q 002039 279 AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 320 (977)
Q Consensus 279 l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 320 (977)
+..+|..|++|+|++|.||+++.+ +.++|+|||.+..+..
T Consensus 113 l~~lH~~~i~H~dl~p~nili~~~--~~~~l~dfg~~~~~~~ 152 (255)
T cd08219 113 VQHIHEKRVLHRDIKSKNIFLTQN--GKVKLGDFGSARLLTS 152 (255)
T ss_pred HHHHhhCCcccCCCCcceEEECCC--CcEEEcccCcceeecc
Confidence 788999999999999999999865 8999999999877654
No 258
>cd05062 PTKc_IGF-1R Catalytic domain of the Protein Tyrosine Kinase, Insulin-like Growth Factor-1 Receptor. Protein Tyrosine Kinase (PTK) family; Insulin-like Growth Factor-1 Receptor (IGF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. IGF-1R is a receptor tyr kinases (RTK) that is composed of two alphabeta heterodimers. Binding of the ligand (IGF-1 or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, which stimulates downstream kinase activities and biological function. IGF-1R signaling is important in the differentiation, growth, and survival of normal cells. In cancer cells, wh
Probab=99.08 E-value=5.9e-10 Score=122.37 Aligned_cols=79 Identities=19% Similarity=0.235 Sum_probs=58.1
Q ss_pred cCCceEEeeccCCCCCCChHHHHhc---------CCCHHHHHHHHHHHH--HHHHHhcCccccCCCCCCeEEccCCCCce
Q 002039 239 SSETVLILEFMDGIRLNDCESLEAF---------GVNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRP 307 (977)
Q Consensus 239 ~~~~vLVmE~i~G~~L~~~~~~~~~---------~~~~~~l~~~l~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i 307 (977)
....++||||++|.+|.++...... ..+...+...+.++. +..+|..|++|+|+||.||+++.+ +.+
T Consensus 81 ~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~~vH~dlkp~Nil~~~~--~~~ 158 (277)
T cd05062 81 GQPTLVIMELMTRGDLKSYLRSLRPEMENNPVQAPPSLKKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAED--FTV 158 (277)
T ss_pred CCCeEEEEecCCCCCHHHHHHHcCccccccccccCCCHHHHHHHHHHHHHHHHHHHHCCcccCCcchheEEEcCC--CCE
Confidence 4567899999999999876432111 123334444443433 678999999999999999999965 899
Q ss_pred EEEecccccccC
Q 002039 308 ILLDFGLTKKLS 319 (977)
Q Consensus 308 ~LiDFG~~~~l~ 319 (977)
+|+|||++..+.
T Consensus 159 ~l~dfg~~~~~~ 170 (277)
T cd05062 159 KIGDFGMTRDIY 170 (277)
T ss_pred EECCCCCccccC
Confidence 999999987653
No 259
>KOG1167 consensus Serine/threonine protein kinase of the CDC7 subfamily involved in DNA synthesis, repair and recombination [Replication, recombination and repair]
Probab=99.08 E-value=1.6e-10 Score=127.23 Aligned_cols=134 Identities=19% Similarity=0.326 Sum_probs=89.8
Q ss_pred cccccccccEEEEEEec----CCCEEEEEEecC-ChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCc
Q 002039 124 TPLATASIAQVHRATLV----DGRQVVVKVQHQ-GIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDF 198 (977)
Q Consensus 124 ~piasaSigqV~~A~l~----~G~~VAVKv~~p-~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~ 198 (977)
.+||.|+|+.||+|++. ..+.||+|-.++ ....++..++..|..+-.
T Consensus 42 ~kigeGsFssv~~a~~~~~~~~~~~valk~i~~ts~p~ri~~El~~L~~~gG---------------------------- 93 (418)
T KOG1167|consen 42 NKIGEGSFSSVYKATDIEQDTKRRYVALKAIYRTSSPSRILNELEMLYRLGG---------------------------- 93 (418)
T ss_pred ccccccchhhhhhhhHhhhccccceEeeeecccccCchHHHHHHHHHHHhcc----------------------------
Confidence 57999999999999974 468899996543 233455555544433211
Q ss_pred HHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeeecCCceEEeeccCCCCCCChHHHHhcCCCHHHHHHHHHHHH
Q 002039 199 NSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQSSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY 278 (977)
Q Consensus 199 ~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~ 278 (977)
..|+..+...+.. ....++||||++-....++. ..++...+...+...+
T Consensus 94 ---~~ni~~~~~~~rn------------------------nd~v~ivlp~~~H~~f~~l~----~~l~~~~i~~Yl~~ll 142 (418)
T KOG1167|consen 94 ---SDNIIKLNGCFRN------------------------NDQVAIVLPYFEHDRFRDLY----RSLSLAEIRWYLRNLL 142 (418)
T ss_pred ---chhhhcchhhhcc------------------------CCeeEEEecccCccCHHHHH----hcCCHHHHHHHHHHHH
Confidence 0122222222210 34457899999876665542 2344455555554444
Q ss_pred --HHHHHhcCccccCCCCCCeEEccCCCCceEEEecccccc
Q 002039 279 --AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKK 317 (977)
Q Consensus 279 --l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~ 317 (977)
+.++|..||+|||+||+|+|.+.. .++-+|+|||++..
T Consensus 143 ~Al~~~h~~GIvHRDiKpsNFL~n~~-t~rg~LvDFgLA~~ 182 (418)
T KOG1167|consen 143 KALAHLHKNGIVHRDIKPSNFLYNRR-TQRGVLVDFGLAQR 182 (418)
T ss_pred HHhhhhhccCccccCCCccccccccc-cCCceEEechhHHH
Confidence 888999999999999999999875 67899999999876
No 260
>cd07832 STKc_CCRK Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase. Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of hea
Probab=99.08 E-value=4e-10 Score=123.99 Aligned_cols=141 Identities=21% Similarity=0.211 Sum_probs=94.1
Q ss_pred cccccccccEEEEEEec-CCCEEEEEEecCChh-hhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCcHHH
Q 002039 124 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIK-TIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSE 201 (977)
Q Consensus 124 ~piasaSigqV~~A~l~-~G~~VAVKv~~p~i~-~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~E 201 (977)
+.||.|++|.||+|+.. +|+.||||+.+.... ... +-++.+|
T Consensus 6 ~~l~~g~~~~v~~~~~~~~~~~~~vK~~~~~~~~~~~------------------------------------~~~~~~e 49 (286)
T cd07832 6 GRIGEGAHGIVFKAKDRETGETVALKKVALRRLEGGI------------------------------------PNQALRE 49 (286)
T ss_pred eecccCCCcEEEEEEECCCCceEEEEEEEcccccchh------------------------------------hHHHHHH
Confidence 46899999999999974 799999998754321 000 0123344
Q ss_pred HHHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeee-cCCceEEeeccCCCCCCChHHHHhcCCCHHHHHHHHHHHH--
Q 002039 202 AENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY-- 278 (977)
Q Consensus 202 a~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~-- 278 (977)
...+.++.+ ..-+.+...+. ....++||||+ |.+|.+........++...+...+.+++
T Consensus 50 ~~~l~~~~~-----------------~~i~~~~~~~~~~~~~~~v~e~~-~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~ 111 (286)
T cd07832 50 IKALQACQH-----------------PYVVKLLDVFPHGSGFVLVMEYM-PSDLSEVLRDEERPLPEAQVKSYMRMLLKG 111 (286)
T ss_pred HHHHHhCCC-----------------CCCcceeeEEecCCeeEEEeccc-CCCHHHHHHhcCCCCCHHHHHHHHHHHHHH
Confidence 444443321 01122222222 45568999999 9998876433333455555555444443
Q ss_pred HHHHHhcCccccCCCCCCeEEccCCCCceEEEecccccccCH
Q 002039 279 AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 320 (977)
Q Consensus 279 l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 320 (977)
+..+|..|++|+|+||.||+++.+ +.++|+|||++..+..
T Consensus 112 l~~lH~~~i~H~dl~p~ni~~~~~--~~~~l~dfg~~~~~~~ 151 (286)
T cd07832 112 VAYMHANGIMHRDLKPANLLISAD--GVLKIADFGLARLFSE 151 (286)
T ss_pred HHHHHHCCeecCCcCHHHEEEcCC--CcEEEeeeeecccccC
Confidence 678899999999999999999865 8899999999887654
No 261
>cd05035 PTKc_Axl_like Catalytic Domain of Axl-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Axl subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The Axl subfamily consists of Axl, Tyro3 (or Sky), Mer (or Mertk), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl subfamily members are implicated in a variety of cellu
Probab=99.08 E-value=5.8e-10 Score=121.67 Aligned_cols=76 Identities=21% Similarity=0.262 Sum_probs=57.4
Q ss_pred ceEEeeccCCCCCCChHHHHh-----cCCCHHHHHHHHHHHH--HHHHHhcCccccCCCCCCeEEccCCCCceEEEeccc
Q 002039 242 TVLILEFMDGIRLNDCESLEA-----FGVNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGL 314 (977)
Q Consensus 242 ~vLVmE~i~G~~L~~~~~~~~-----~~~~~~~l~~~l~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~ 314 (977)
.+++|||+++.+|........ ..++...+...+.++. +..+|..|++|+|+||.||+++++ ++++|+|||+
T Consensus 82 ~~~v~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~aL~~lH~~~i~H~dlkp~Nil~~~~--~~~kl~dfg~ 159 (273)
T cd05035 82 PMVILPFMKHGDLHSFLLYSRLGGLPEKLPLQTLLKFMVDIALGMEYLSNRNFIHRDLAARNCMLRED--MTVCVADFGL 159 (273)
T ss_pred cEEEEeccCCCCHHHHHHHhhccCCcccCCHHHHHHHHHHHHHHHHHHHhCCeeccccchheEEECCC--CeEEECCccc
Confidence 589999999999876643221 1234444444444443 788999999999999999999865 8999999999
Q ss_pred ccccC
Q 002039 315 TKKLS 319 (977)
Q Consensus 315 ~~~l~ 319 (977)
++.+.
T Consensus 160 ~~~~~ 164 (273)
T cd05035 160 SKKIY 164 (273)
T ss_pred eeecc
Confidence 88664
No 262
>cd05148 PTKc_Srm_Brk Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk. Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase dom
Probab=99.08 E-value=2.9e-10 Score=123.36 Aligned_cols=141 Identities=15% Similarity=0.142 Sum_probs=91.9
Q ss_pred cccccccccEEEEEEecCCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCcHHHHH
Q 002039 124 TPLATASIAQVHRATLVDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEAE 203 (977)
Q Consensus 124 ~piasaSigqV~~A~l~~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea~ 203 (977)
+.||.|++|.||+|+.++++.|++|+.+....... . ++..|..
T Consensus 12 ~~ig~g~~~~vy~~~~~~~~~~~~k~~~~~~~~~~---------------------------~----------~~~~e~~ 54 (261)
T cd05148 12 RKLGSGYFGEVWEGLWKNRVRVAIKILKSDDLLKQ---------------------------Q----------DFQKEVQ 54 (261)
T ss_pred hhhccCCCccEEEeEecCCCcEEEEeccccchhhH---------------------------H----------HHHHHHH
Confidence 56899999999999998899999998654321000 0 1223333
Q ss_pred HHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeee-cCCceEEeeccCCCCCCChHHHHh-cCCCHHHHHHHHHHHH--H
Q 002039 204 NTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLEA-FGVNKQKVVEEITRAY--A 279 (977)
Q Consensus 204 n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLVmE~i~G~~L~~~~~~~~-~~~~~~~l~~~l~~~~--l 279 (977)
.+..+.+ ...+.+-.... ....++||||++|.+|.+...... ...+...+...+.+++ +
T Consensus 55 ~l~~l~~-----------------~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~al 117 (261)
T cd05148 55 ALKRLRH-----------------KHLISLFAVCSVGEPVYIITELMEKGSLLAFLRSPEGQVLPVASLIDMACQVAEGM 117 (261)
T ss_pred HHhcCCC-----------------cchhheeeeEecCCCeEEEEeecccCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHH
Confidence 3332211 00011111111 445689999999999987643211 1234444444444443 6
Q ss_pred HHHHhcCccccCCCCCCeEEccCCCCceEEEecccccccCH
Q 002039 280 HQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 320 (977)
Q Consensus 280 ~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 320 (977)
..+|..|++|+|++|.||+++.+ +.++|+|||.+..+..
T Consensus 118 ~~lH~~~i~h~dl~~~nilv~~~--~~~kl~d~g~~~~~~~ 156 (261)
T cd05148 118 AYLEEQNSIHRDLAARNILVGED--LVCKVADFGLARLIKE 156 (261)
T ss_pred HHHHHCCeeccccCcceEEEcCC--ceEEEccccchhhcCC
Confidence 78899999999999999999865 8899999999877643
No 263
>cd05048 PTKc_Ror Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimer
Probab=99.08 E-value=6.2e-10 Score=122.47 Aligned_cols=141 Identities=16% Similarity=0.218 Sum_probs=91.0
Q ss_pred cccccccccEEEEEEecC------CCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccC
Q 002039 124 TPLATASIAQVHRATLVD------GRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELD 197 (977)
Q Consensus 124 ~piasaSigqV~~A~l~~------G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld 197 (977)
+.||.|++|.||+|.... .+.|++|+.+........ -+
T Consensus 11 ~~lg~G~~g~Vy~~~~~~~~~~~~~~~v~~K~~~~~~~~~~~------------------------------------~~ 54 (283)
T cd05048 11 EELGEGAFGKVYKGELTGPNERLSATSVAIKTLKENAEPKVQ------------------------------------QE 54 (283)
T ss_pred hcccCccCCcEEEEEEecCCCCcceeeEEEEecccCCCHHHH------------------------------------HH
Confidence 579999999999998642 267999987643221110 02
Q ss_pred cHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeee-cCCceEEeeccCCCCCCChHHHHh--------------
Q 002039 198 FNSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLEA-------------- 262 (977)
Q Consensus 198 ~~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLVmE~i~G~~L~~~~~~~~-------------- 262 (977)
|.+|.+.+.++.+ ..-+.+-..+. ....+++|||++|.+|.++.....
T Consensus 55 ~~~ei~~l~~l~h-----------------~~i~~~~~~~~~~~~~~~~~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~ 117 (283)
T cd05048 55 FRQEAELMSDLQH-----------------PNIVCLLGVCTKEQPTCMLFEYLAHGDLHEFLVRNSPHSDVGAESGDETV 117 (283)
T ss_pred HHHHHHHHHhcCC-----------------cccceEEEEEcCCCceEEEEecCCCCcHHHHHHhcCCCcccccccccccc
Confidence 3345554444322 00111112222 355689999999999877643221
Q ss_pred -cCCCHHHHHHHHHHHH--HHHHHhcCccccCCCCCCeEEccCCCCceEEEecccccccC
Q 002039 263 -FGVNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 319 (977)
Q Consensus 263 -~~~~~~~l~~~l~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~ 319 (977)
..++...+...+.++. +..+|..|++|+|+||.||+++++ +.++|+|||++..+.
T Consensus 118 ~~~l~~~~~~~~~~~l~~al~~lH~~~i~H~dlkp~Nil~~~~--~~~~L~dfg~~~~~~ 175 (283)
T cd05048 118 KSSLDCSDFLHIAIQIAAGMEYLSSHHFVHRDLAARNCLVGEG--LTVKISDFGLSRDIY 175 (283)
T ss_pred cCCCCHHHHHHHHHHHHHHHHHHHhCCeeccccccceEEEcCC--CcEEECCCcceeecc
Confidence 1233444444444433 788999999999999999999865 889999999987653
No 264
>cd07839 STKc_CDK5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also
Probab=99.08 E-value=2.8e-10 Score=125.23 Aligned_cols=141 Identities=16% Similarity=0.137 Sum_probs=89.9
Q ss_pred cccccccccEEEEEEec-CCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCcHHHH
Q 002039 124 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (977)
Q Consensus 124 ~piasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea 202 (977)
+.||.|++|.||+|+.+ +|+.||+|+.+...... ..+.++.+|.
T Consensus 6 ~~l~~g~~~~vy~~~~~~~g~~~~~k~~~~~~~~~-----------------------------------~~~~~~~~ei 50 (284)
T cd07839 6 EKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDE-----------------------------------GVPSSALREI 50 (284)
T ss_pred EEecccCCeEEEEEEECCCCcEEEEEEeecccccc-----------------------------------cCccchhHHH
Confidence 56899999999999974 79999999865321100 0011233444
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeee-cCCceEEeeccCCCCCCChHHHHhcCCCHHHHHHHHHHHH--H
Q 002039 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--A 279 (977)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~--l 279 (977)
..+.++.+. .-+.+-..+. ....++||||++| +|.+.........+...+...+.+++ +
T Consensus 51 ~~l~~l~h~-----------------~i~~~~~~~~~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~qi~~al 112 (284)
T cd07839 51 CLLKELKHK-----------------NIVRLYDVLHSDKKLTLVFEYCDQ-DLKKYFDSCNGDIDPEIVKSFMFQLLKGL 112 (284)
T ss_pred HHHHhcCCC-----------------CeeeHHHHhccCCceEEEEecCCC-CHHHHHHhcCCCCCHHHHHHHHHHHHHHH
Confidence 444443210 0111111111 4556899999986 44443221123345555555555544 7
Q ss_pred HHHHhcCccccCCCCCCeEEccCCCCceEEEecccccccC
Q 002039 280 HQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 319 (977)
Q Consensus 280 ~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~ 319 (977)
..+|..|++|+|+||+||+++.+ +.++|+|||++..+.
T Consensus 113 ~~LH~~~i~H~dl~~~nil~~~~--~~~~l~dfg~~~~~~ 150 (284)
T cd07839 113 AFCHSHNVLHRDLKPQNLLINKN--GELKLADFGLARAFG 150 (284)
T ss_pred HHHHHCCEecCCCCHHHEEEcCC--CcEEECccchhhccC
Confidence 88999999999999999999865 899999999987653
No 265
>cd07867 STKc_CDC2L6 Catalytic domain of Serine/Threonine Kinase, Cell Division Cycle 2-like 6. Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 6 (CDC2L6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L6 is also called CDK8-like and was previously referred to as CDK11. However, this is a confusing nomenclature as CDC2L6 is distinct from CDC2L1, which is represented by the two protein products from its gene, called CDK11(p110) and CDK11(p58), as well as
Probab=99.08 E-value=4.6e-10 Score=125.72 Aligned_cols=142 Identities=13% Similarity=0.186 Sum_probs=86.9
Q ss_pred cCccccccccccEEEEEEec---CCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccC
Q 002039 121 FVETPLATASIAQVHRATLV---DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELD 197 (977)
Q Consensus 121 ~d~~piasaSigqV~~A~l~---~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld 197 (977)
++...||.|++|.||+|+.+ +++.||||..+..-. ...
T Consensus 4 ~~g~~lG~G~~g~Vy~~~~~~~~~~~~~a~k~~~~~~~---------------------------------------~~~ 44 (317)
T cd07867 4 YEGCKVGRGTYGHVYKAKRKDGKDEKEYALKQIEGTGI---------------------------------------SMS 44 (317)
T ss_pred eeceEeccCCCeeEEEEEecCCCccceEEEEEecCCCC---------------------------------------cHH
Confidence 34467999999999999975 457899997653210 001
Q ss_pred cHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeee---cCCceEEeeccCCCCCCChHHHHh--------cCCC
Q 002039 198 FNSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ---SSETVLILEFMDGIRLNDCESLEA--------FGVN 266 (977)
Q Consensus 198 ~~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~---~~~~vLVmE~i~G~~L~~~~~~~~--------~~~~ 266 (977)
+.+|++.+.++.+ ...+.+-.++. ....++||||+++ .+.+...... ..+.
T Consensus 45 ~~~E~~~l~~l~h-----------------~niv~~~~~~~~~~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~l~ 106 (317)
T cd07867 45 ACREIALLRELKH-----------------PNVIALQKVFLSHSDRKVWLLFDYAEH-DLWHIIKFHRASKANKKPMQLP 106 (317)
T ss_pred HHHHHHHHHhCCC-----------------CCeeeEEEEEeccCCCeEEEEEeeeCC-cHHHHHHhhhccccCCCCccCC
Confidence 2344444444322 11223333332 2345799999986 3433321110 1133
Q ss_pred HHHHHHHHHHHH--HHHHHhcCccccCCCCCCeEEccC--CCCceEEEecccccccC
Q 002039 267 KQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKD--PPHRPILLDFGLTKKLS 319 (977)
Q Consensus 267 ~~~l~~~l~~~~--l~~i~~~G~~H~D~hPgNIlv~~~--~~g~i~LiDFG~~~~l~ 319 (977)
...+...+.+++ +..+|..|++|+|+||.|||+..+ .+++++|+|||+++.+.
T Consensus 107 ~~~~~~i~~qi~~aL~~lH~~~ivH~Dlkp~Nil~~~~~~~~~~~kl~DfG~a~~~~ 163 (317)
T cd07867 107 RSMVKSLLYQILDGIHYLHANWVLHRDLKPANILVMGEGPERGRVKIADMGFARLFN 163 (317)
T ss_pred HHHHHHHHHHHHHHHHHHHhCCEEcCCCCHHHEEEccCCCCCCcEEEeeccceeccC
Confidence 333333333433 778999999999999999999532 24789999999998664
No 266
>cd07870 STKc_PFTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase. Serine/Threonine Kinases (STKs), PFTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-2 is also referred to as ALS2CR7 (amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 7). It may be associated with amyotrophic lateral sclerosis 2 (ALS2), an autosomal recess
Probab=99.08 E-value=4.8e-10 Score=124.03 Aligned_cols=140 Identities=21% Similarity=0.191 Sum_probs=87.6
Q ss_pred ccccccccccEEEEEEec-CCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCcHHH
Q 002039 123 ETPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSE 201 (977)
Q Consensus 123 ~~piasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~E 201 (977)
.+.||+|++|.||+|+.+ +|+.||||+.+...... .+..+.+|
T Consensus 10 ~~~ig~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~------------------------------------~~~~~~~e 53 (291)
T cd07870 10 LEKLGEGSYATVYKGISRINGQLVALKVISMKTEEG------------------------------------VPFTAIRE 53 (291)
T ss_pred EEEEEecCCEEEEEEEEcCCCcEEEEEEecccCcCC------------------------------------CcHHHHHH
Confidence 367999999999999874 79999999865322110 01123345
Q ss_pred HHHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeee-cCCceEEeeccCCCCCCChHHHHhcCCCHHHHHHHHHHHH--
Q 002039 202 AENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY-- 278 (977)
Q Consensus 202 a~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~-- 278 (977)
+..+..+.+ ..-+.+-..+. ....++||||++| ++.+.............+...+.++.
T Consensus 54 ~~~l~~l~h-----------------~ni~~~~~~~~~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~qi~~~ 115 (291)
T cd07870 54 ASLLKGLKH-----------------ANIVLLHDIIHTKETLTFVFEYMHT-DLAQYMIQHPGGLHPYNVRLFMFQLLRG 115 (291)
T ss_pred HHHHHhcCC-----------------CCEeEEEEEEecCCeEEEEEecccC-CHHHHHHhCCCCCCHHHHHHHHHHHHHH
Confidence 544444422 01122222222 3456899999975 44332211112233344444334433
Q ss_pred HHHHHhcCccccCCCCCCeEEccCCCCceEEEeccccccc
Q 002039 279 AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKL 318 (977)
Q Consensus 279 l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l 318 (977)
+..+|..|++|+|+||.||+++.+ ++++|+|||++...
T Consensus 116 L~~lH~~~i~H~dlkp~Nil~~~~--~~~~l~Dfg~~~~~ 153 (291)
T cd07870 116 LAYIHGQHILHRDLKPQNLLISYL--GELKLADFGLARAK 153 (291)
T ss_pred HHHHHhCCcccCCCChHHEEEcCC--CcEEEecccccccc
Confidence 678899999999999999999865 89999999988654
No 267
>cd06628 STKc_MAPKKK_Byr2_like Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate
Probab=99.08 E-value=7.3e-10 Score=120.66 Aligned_cols=148 Identities=16% Similarity=0.119 Sum_probs=93.1
Q ss_pred cccccccccEEEEEEec-CCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCcHHHH
Q 002039 124 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (977)
Q Consensus 124 ~piasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea 202 (977)
..||.|++|+||+|+.. +++.||||+........-..+ ...++.+ .+.+|+
T Consensus 6 ~~ig~g~~~~v~~a~~~~~~~~~~~k~~~~~~~~~~~~~----------------------~~~~~~~------~~~~e~ 57 (267)
T cd06628 6 ALIGSGSFGSVYLGMNASSGELMAVKQVELPSVSASSKD----------------------RKRSMLD------ALAREI 57 (267)
T ss_pred ceeecCCCeEEEEEEecCCCcEEEEEEecCCCcccchhH----------------------HHHHHHH------HHHHHH
Confidence 57899999999999874 789999998754321100000 0000000 233454
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeee-cCCceEEeeccCCCCCCChHHHHhcCCCHHHHHHHHHHHH--H
Q 002039 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--A 279 (977)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~--l 279 (977)
..+.++.+ ..-+.+..... ....+++|||++|.+|.++... ...++...+...+.+++ +
T Consensus 58 ~~l~~l~h-----------------~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~-~~~l~~~~~~~~~~~l~~~l 119 (267)
T cd06628 58 ALLKELQH-----------------ENIVQYLGSSLDADHLNIFLEYVPGGSVAALLNN-YGAFEETLVRNFVRQILKGL 119 (267)
T ss_pred HHHHhcCC-----------------CCeeeEEEEEEeCCccEEEEEecCCCCHHHHHHh-ccCccHHHHHHHHHHHHHHH
Confidence 44444422 01122222222 4667899999999998776432 12234333333333333 6
Q ss_pred HHHHhcCccccCCCCCCeEEccCCCCceEEEecccccccC
Q 002039 280 HQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 319 (977)
Q Consensus 280 ~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~ 319 (977)
..+|..|++|+|++|.||+++++ +.++|+|||++..+.
T Consensus 120 ~~lH~~~ivH~di~p~nil~~~~--~~~~l~dfg~~~~~~ 157 (267)
T cd06628 120 NYLHNRGIIHRDIKGANILVDNK--GGIKISDFGISKKLE 157 (267)
T ss_pred HHHHhcCcccccCCHHHEEEcCC--CCEEecccCCCcccc
Confidence 78899999999999999999855 899999999988775
No 268
>cd07845 STKc_CDK10 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10. Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing
Probab=99.07 E-value=4e-10 Score=125.95 Aligned_cols=142 Identities=15% Similarity=0.110 Sum_probs=92.6
Q ss_pred cccccccccEEEEEEec-CCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCcHHHH
Q 002039 124 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (977)
Q Consensus 124 ~piasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea 202 (977)
+.||.|++|.||+|+.+ +|+.||+|+.+...... .....+.+|+
T Consensus 13 ~~ig~g~~~~v~~~~~~~~~~~vaiK~~~~~~~~~-----------------------------------~~~~~~~~E~ 57 (309)
T cd07845 13 NRIGEGTYGIVYRARDTTSGEIVALKKVRMDNERD-----------------------------------GIPISSLREI 57 (309)
T ss_pred eeeeecCCEEEEEEEECCCCcEEEEEEEEeccCCC-----------------------------------CCcchhhHHH
Confidence 56999999999999974 79999999875321100 0111234455
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeee-c--CCceEEeeccCCCCCCChHHHHhcCCCHHHHHHHHHHHH-
Q 002039 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-S--SETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY- 278 (977)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~--~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~- 278 (977)
..+.++.+ ...+.+..++. . ...++||||+++ +|.++.......+....+...+.+++
T Consensus 58 ~~l~~l~h-----------------~~i~~~~~~~~~~~~~~~~lv~e~~~~-~l~~~l~~~~~~l~~~~~~~~~~qi~~ 119 (309)
T cd07845 58 TLLLNLRH-----------------PNIVELKEVVVGKHLDSIFLVMEYCEQ-DLASLLDNMPTPFSESQVKCLMLQLLR 119 (309)
T ss_pred HHHHhCCC-----------------CCCcceEEEEecCCCCeEEEEEecCCC-CHHHHHHhcccCCCHHHHHHHHHHHHH
Confidence 55544432 11223333332 1 346899999986 55544322222344555544444444
Q ss_pred -HHHHHhcCccccCCCCCCeEEccCCCCceEEEecccccccCH
Q 002039 279 -AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 320 (977)
Q Consensus 279 -l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 320 (977)
+..+|..|++|+|++|+||+++.+ +.++|+|||++..+..
T Consensus 120 ~l~~lH~~~i~H~dl~p~nil~~~~--~~~kL~dfg~~~~~~~ 160 (309)
T cd07845 120 GLQYLHENFIIHRDLKVSNLLLTDK--GCLKIADFGLARTYGL 160 (309)
T ss_pred HHHHHHhCCeecCCCCHHHEEECCC--CCEEECccceeeecCC
Confidence 778999999999999999999865 8999999999887643
No 269
>cd08228 STKc_Nek6 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 6. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 is required for the transition from metaphase to anaphase. It also plays important roles in mitotic spindle formation and cytokinesis. Activated by Nek9 during mitosis, Nek6 phosphorylates Eg5, a kinesin that is important for spindle bipolarity. Nek6 localizes to spindle microtubules during metaphase
Probab=99.07 E-value=3.9e-10 Score=122.80 Aligned_cols=144 Identities=18% Similarity=0.169 Sum_probs=92.5
Q ss_pred cccccccccEEEEEEec-CCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCcHHHH
Q 002039 124 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (977)
Q Consensus 124 ~piasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea 202 (977)
+.|+.|++|.||+|+.+ +|+.||||..++-... +.. .+.++.+|.
T Consensus 8 ~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~----~~~------------------------------~~~~~~~e~ 53 (267)
T cd08228 8 KKIGRGQFSEVYRATCLLDRKPVALKKVQIFEMM----DAK------------------------------ARQDCVKEI 53 (267)
T ss_pred eeeccCCCeeEEEEEEeCCCCEEEEEEeeccccC----CHH------------------------------HHHHHHHHH
Confidence 56999999999999974 8999999976431100 000 011234454
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeee-cCCceEEeeccCCCCCCChHHHH---hcCCCHHHHHHHHHHHH
Q 002039 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLE---AFGVNKQKVVEEITRAY 278 (977)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLVmE~i~G~~L~~~~~~~---~~~~~~~~l~~~l~~~~ 278 (977)
+.+.++.+ ..-+.+...+. ....++||||++|.+|.++.... ....+...+...+.++.
T Consensus 54 ~~l~~l~h-----------------~~i~~~~~~~~~~~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~ 116 (267)
T cd08228 54 DLLKQLNH-----------------PNVIKYLDSFIEDNELNIVLELADAGDLSQMIKYFKKQKRLIPERTVWKYFVQLC 116 (267)
T ss_pred HHHHhCCC-----------------cceeeeeeeEEECCeEEEEEEecCCCcHHHHHHHhhhccCCCCHHHHHHHHHHHH
Confidence 44444321 00112222222 45568999999999987764321 11234444444443333
Q ss_pred --HHHHHhcCccccCCCCCCeEEccCCCCceEEEecccccccCH
Q 002039 279 --AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 320 (977)
Q Consensus 279 --l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 320 (977)
+..+|..|++|+|+||.||+++.+ +.++|+|||++..+..
T Consensus 117 ~~l~~LH~~~i~H~dl~~~nil~~~~--~~~~l~d~g~~~~~~~ 158 (267)
T cd08228 117 SAVEHMHSRRVMHRDIKPANVFITAT--GVVKLGDLGLGRFFSS 158 (267)
T ss_pred HHHHHHhhCCeeCCCCCHHHEEEcCC--CCEEECccccceeccc
Confidence 678899999999999999999865 8899999999887754
No 270
>cd06655 STKc_PAK2 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=99.07 E-value=4.6e-10 Score=124.89 Aligned_cols=140 Identities=14% Similarity=0.188 Sum_probs=92.8
Q ss_pred cccccccccEEEEEEe-cCCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCcHHHH
Q 002039 124 TPLATASIAQVHRATL-VDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (977)
Q Consensus 124 ~piasaSigqV~~A~l-~~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea 202 (977)
+.||.|++|.||+|+. .+|+.|+||...-..... .+ .+.+|.
T Consensus 25 ~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~~~~~---------------------------~~----------~~~~e~ 67 (296)
T cd06655 25 EKIGQGASGTVFTAIDVATGQEVAIKQINLQKQPK---------------------------KE----------LIINEI 67 (296)
T ss_pred EEEecCCCeEEEEEEEcCCCcEEEEEEEecccCch---------------------------HH----------HHHHHH
Confidence 5699999999999986 589999999763211000 00 122344
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeee-cCCceEEeeccCCCCCCChHHHHhcCCCHHHHHHHHHHHH--H
Q 002039 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--A 279 (977)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~--l 279 (977)
..+..+.+ ...+.+-..+. ....++||||++|.+|.+.. .....+...+...+.+++ +
T Consensus 68 ~~l~~l~h-----------------~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~--~~~~l~~~~~~~i~~~l~~al 128 (296)
T cd06655 68 LVMKELKN-----------------PNIVNFLDSFLVGDELFVVMEYLAGGSLTDVV--TETCMDEAQIAAVCRECLQAL 128 (296)
T ss_pred HHHHhcCC-----------------CceeeeeeeEecCceEEEEEEecCCCcHHHHH--HhcCCCHHHHHHHHHHHHHHH
Confidence 43333321 00111111222 45678999999999988764 333455555555544443 6
Q ss_pred HHHHhcCccccCCCCCCeEEccCCCCceEEEecccccccCHH
Q 002039 280 HQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSSS 321 (977)
Q Consensus 280 ~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~~ 321 (977)
..+|..|++|+|+||.||+++.+ +.++|+|||++..+...
T Consensus 129 ~~LH~~~i~H~dL~p~Nili~~~--~~~kl~dfg~~~~~~~~ 168 (296)
T cd06655 129 EFLHANQVIHRDIKSDNVLLGMD--GSVKLTDFGFCAQITPE 168 (296)
T ss_pred HHHHHCCcccCCCCHHHEEECCC--CCEEEccCccchhcccc
Confidence 78899999999999999999865 89999999998876543
No 271
>cd08223 STKc_Nek4 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 4. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 4 (Nek4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek4 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Nek4 is highly abundant in the testis. Its specific function is unknown.
Probab=99.07 E-value=5.8e-10 Score=120.62 Aligned_cols=142 Identities=15% Similarity=0.134 Sum_probs=91.0
Q ss_pred cccccccccEEEEEEec-CCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCcHHHH
Q 002039 124 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (977)
Q Consensus 124 ~piasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea 202 (977)
+.++.|++|.||+|+.+ +|+.||||......... .+. + .+.+|.
T Consensus 6 ~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~--~~~-----------------------~----------~~~~e~ 50 (257)
T cd08223 6 RVVGKGSYGEVSLVRHRTDGKQYVIKKLNLRNASR--RER-----------------------K----------AAEQEA 50 (257)
T ss_pred EEecCCCCeEEEEEEEcCCCcEEEEEEEehhhcCH--HHH-----------------------H----------HHHHHH
Confidence 57899999999999974 68999999764211100 000 0 123344
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeee--cCCceEEeeccCCCCCCChHHHHh-cCCCHHHHHHHHHHHH-
Q 002039 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ--SSETVLILEFMDGIRLNDCESLEA-FGVNKQKVVEEITRAY- 278 (977)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~--~~~~vLVmE~i~G~~L~~~~~~~~-~~~~~~~l~~~l~~~~- 278 (977)
..+.++++ ...+.+...+. ....+++|||++|.+|.+...... ...+...+...+.++.
T Consensus 51 ~~l~~l~~-----------------~~i~~~~~~~~~~~~~~~lv~e~~~~~~l~~~l~~~~~~~l~~~~~~~~~~~l~~ 113 (257)
T cd08223 51 QLLSQLKH-----------------PNIVAYRESWEGEDGLLYIVMGFCEGGDLYHKLKEQKGKLLPENQVVEWFVQIAM 113 (257)
T ss_pred HHHHhCCC-----------------CCeeeeeeeecCCCCEEEEEecccCCCcHHHHHHHhcCCCCCHHHHHHHHHHHHH
Confidence 43333321 11122222222 223579999999998876643221 2245555555555544
Q ss_pred -HHHHHhcCccccCCCCCCeEEccCCCCceEEEecccccccC
Q 002039 279 -AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 319 (977)
Q Consensus 279 -l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~ 319 (977)
+..+|..|++|+|++|.||+++.+ +.++|+|||++..+.
T Consensus 114 ~l~~lH~~~i~H~di~p~nil~~~~--~~~~l~df~~~~~~~ 153 (257)
T cd08223 114 ALQYLHEKHILHRDLKTQNVFLTRT--NIIKVGDLGIARVLE 153 (257)
T ss_pred HHHHHHhCCeeccCCCchhEEEecC--CcEEEecccceEEec
Confidence 788999999999999999999865 899999999987664
No 272
>cd06615 PKc_MEK Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase. Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the down
Probab=99.07 E-value=6.8e-10 Score=124.20 Aligned_cols=140 Identities=19% Similarity=0.148 Sum_probs=92.3
Q ss_pred cccccccccEEEEEEec-CCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCcHHHH
Q 002039 124 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (977)
Q Consensus 124 ~piasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea 202 (977)
+.||+|++|.||+|+.. +|+.||+|+.+........ .++.+|+
T Consensus 7 ~~lg~G~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~------------------------------------~~~~~E~ 50 (308)
T cd06615 7 GELGAGNGGVVTKVLHRPSGLIMARKLIHLEIKPAIR------------------------------------NQIIREL 50 (308)
T ss_pred eeccCCCCeEEEEEEEcCCCeEEEEEEeccccCHHHH------------------------------------HHHHHHH
Confidence 56999999999999974 7889999987643321110 0233455
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeee-cCCceEEeeccCCCCCCChHHHHhcCCCHHHHHHHHHHHH--H
Q 002039 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--A 279 (977)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~--l 279 (977)
+.+.++.+ ..-+.+...+. ....+|||||++|.+|.++.... ..++...+...+.+++ +
T Consensus 51 ~~l~~l~h-----------------~~iv~~~~~~~~~~~~~lv~ey~~~~~L~~~l~~~-~~~~~~~~~~~~~~i~~~l 112 (308)
T cd06615 51 KVLHECNS-----------------PYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKA-GRIPENILGKISIAVLRGL 112 (308)
T ss_pred HHHHhCCC-----------------CCCCeEEEEEeeCCEEEEEeeccCCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHH
Confidence 55544422 11122223332 45678999999999998774322 2334444333333333 6
Q ss_pred HHHHh-cCccccCCCCCCeEEccCCCCceEEEecccccccC
Q 002039 280 HQIYV-DGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 319 (977)
Q Consensus 280 ~~i~~-~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~ 319 (977)
..+|. .|++|+|+||.||+++.+ +.++|+|||++..+.
T Consensus 113 ~~lH~~~~i~H~dl~p~nil~~~~--~~~~l~dfg~~~~~~ 151 (308)
T cd06615 113 TYLREKHKIMHRDVKPSNILVNSR--GEIKLCDFGVSGQLI 151 (308)
T ss_pred HHHHhhCCEEECCCChHHEEEecC--CcEEEccCCCccccc
Confidence 67886 699999999999999865 889999999986553
No 273
>cd07861 STKc_CDK1_euk Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2
Probab=99.07 E-value=3.8e-10 Score=124.18 Aligned_cols=141 Identities=16% Similarity=0.128 Sum_probs=89.8
Q ss_pred cccccccccEEEEEEec-CCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCcHHHH
Q 002039 124 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (977)
Q Consensus 124 ~piasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea 202 (977)
+.||+|++|.||+|+.+ +|+.||||+.+......- ..-.+.+|+
T Consensus 6 ~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~-----------------------------------~~~~~~~e~ 50 (285)
T cd07861 6 EKIGEGTYGVVYKGRNKKTGQIVAMKKIRLESEEEG-----------------------------------VPSTAIREI 50 (285)
T ss_pred eEecccCceEEEEEEECCCCcEEEEEEeccccccCC-----------------------------------chHHHHHHH
Confidence 57899999999999974 799999998753211000 000123344
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeee-cCCceEEeeccCCCCCCChHHHHh--cCCCHHHHHHHHHHHH-
Q 002039 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLEA--FGVNKQKVVEEITRAY- 278 (977)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLVmE~i~G~~L~~~~~~~~--~~~~~~~l~~~l~~~~- 278 (977)
..+.++.+ ..-+.+-..+. ....++||||++| .|.+...... ..++...+...+.+++
T Consensus 51 ~~l~~l~h-----------------~~i~~~~~~~~~~~~~~~v~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~qi~~ 112 (285)
T cd07861 51 SLLKELQH-----------------PNIVCLQDVLMQESRLYLIFEFLSM-DLKKYLDSLPKGQYMDAELVKSYLYQILQ 112 (285)
T ss_pred HHHHhcCC-----------------CCEeeeEEEEeeCCeEEEEEecCCC-CHHHHHhcCCCCCcCCHHHHHHHHHHHHH
Confidence 44444321 01122222222 4567899999986 4544322111 2345555544444444
Q ss_pred -HHHHHhcCccccCCCCCCeEEccCCCCceEEEecccccccC
Q 002039 279 -AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 319 (977)
Q Consensus 279 -l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~ 319 (977)
+..+|..|++|+|+||.||+++.+ +.++|+|||++..+.
T Consensus 113 ~L~~lH~~~i~H~dl~p~nil~~~~--~~~~l~dfg~~~~~~ 152 (285)
T cd07861 113 GILFCHSRRVLHRDLKPQNLLIDNK--GVIKLADFGLARAFG 152 (285)
T ss_pred HHHHHHhCCeeecCCCHHHEEEcCC--CcEEECcccceeecC
Confidence 778899999999999999999865 899999999987553
No 274
>cd05036 PTKc_ALK_LTK Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase. Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well
Probab=99.07 E-value=5.1e-10 Score=122.97 Aligned_cols=143 Identities=17% Similarity=0.141 Sum_probs=92.9
Q ss_pred cccccccccEEEEEEec------CCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccC
Q 002039 124 TPLATASIAQVHRATLV------DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELD 197 (977)
Q Consensus 124 ~piasaSigqV~~A~l~------~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld 197 (977)
+.||.|++|.||+|... .+..|++|......... .+.+
T Consensus 12 ~~lg~g~~g~vy~~~~~~~~~~~~~~~v~ik~~~~~~~~~------------------------------------~~~~ 55 (277)
T cd05036 12 RALGHGAFGEVYEGLYRGRDGDAVELQVAVKTLPESCSEQ------------------------------------DESD 55 (277)
T ss_pred eECCCCCCCcEEEEEEecCCCCCCceeEEEEEcCCCCCHH------------------------------------HHHH
Confidence 57999999999999975 35678899764322111 1123
Q ss_pred cHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeee-cCCceEEeeccCCCCCCChHHHHhc------CCCHHHH
Q 002039 198 FNSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAF------GVNKQKV 270 (977)
Q Consensus 198 ~~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLVmE~i~G~~L~~~~~~~~~------~~~~~~l 270 (977)
|.+|...+.++.+ ..-+.+-.... ....++||||++|.+|.++...... .++...+
T Consensus 56 ~~~e~~~l~~l~~-----------------~~i~~~~~~~~~~~~~~lv~e~~~g~~L~~~i~~~~~~~~~~~~~~~~~~ 118 (277)
T cd05036 56 FLMEALIMSKFNH-----------------QNIVRLIGVSFERLPRFILLELMAGGDLKSFLRENRPRPERPSSLTMKDL 118 (277)
T ss_pred HHHHHHHHHhCCC-----------------CCEeeEEEEEccCCCcEEEEecCCCCCHHHHHHHhCCCCCCCCCCCHHHH
Confidence 4555554444422 00111222111 4567899999999999877432211 2344555
Q ss_pred HHHHHHHH--HHHHHhcCccccCCCCCCeEEccCC-CCceEEEecccccccC
Q 002039 271 VEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDP-PHRPILLDFGLTKKLS 319 (977)
Q Consensus 271 ~~~l~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~-~g~i~LiDFG~~~~l~ 319 (977)
...+.++. +..+|..|++|+|+||.||+++.++ +..++|+|||++..+.
T Consensus 119 ~~~~~qi~~~l~~LH~~~ivH~dlkp~nil~~~~~~~~~~kl~dfg~~~~~~ 170 (277)
T cd05036 119 LFCARDVAKGCKYLEENHFIHRDIAARNCLLTCKGPGRVAKIADFGMARDIY 170 (277)
T ss_pred HHHHHHHHHHHHHHHHCCEeecccchheEEEeccCCCcceEeccCccccccC
Confidence 55555544 7788999999999999999998542 2358999999988763
No 275
>KOG0196 consensus Tyrosine kinase, EPH (ephrin) receptor family [Signal transduction mechanisms]
Probab=99.07 E-value=7e-11 Score=137.58 Aligned_cols=176 Identities=17% Similarity=0.193 Sum_probs=122.7
Q ss_pred HHhCCCCCCHHHHHHHHHHHhCCChhhcccccCccccccccccEEEEEEec----CCCEEEEEEecCChhhhhHhhHHHH
Q 002039 90 LQDSLPPRPVQEVSQTIEREFGESMGGMFMDFVETPLATASIAQVHRATLV----DGRQVVVKVQHQGIKTIILEDLKNA 165 (977)
Q Consensus 90 Lqd~~p~~~~~~v~~~l~~elg~~~~~~f~~~d~~piasaSigqV~~A~l~----~G~~VAVKv~~p~i~~~~~~Dl~~l 165 (977)
.+.-+.|+.+|+--+.+. ||-+.++--+-.|+ +.||+|.||.|++|+|+ ....||||.++-|..+.-
T Consensus 603 ~k~YiDP~TYEDPnqAvr-eFakEId~s~i~Ie-~VIGaGEFGEVc~GrLk~pgkre~~VAIKTLK~Gytekq------- 673 (996)
T KOG0196|consen 603 TKTYIDPHTYEDPNQAVR-EFAKEIDPSCVKIE-KVIGAGEFGEVCSGRLKLPGKREITVAIKTLKAGYTEKQ------- 673 (996)
T ss_pred ceeecCCccccCccHHHH-HhhhhcChhheEEE-EEEecccccceecccccCCCCcceeEEEeeeccCccHHH-------
Confidence 444566777765444433 34444444444454 68999999999999995 235699999988765432
Q ss_pred HHHHHHHHhhCCCCCCchhHHHHhhhcccccCcHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeee-cCCceE
Q 002039 166 KSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVL 244 (977)
Q Consensus 166 ~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vL 244 (977)
..||+.||.-+-+|.| +..++.--|.. +..-.+
T Consensus 674 -----------------------------rrdFL~EAsIMGQFdH-----------------PNIIrLEGVVTks~PvMI 707 (996)
T KOG0196|consen 674 -----------------------------RRDFLSEASIMGQFDH-----------------PNIIRLEGVVTKSKPVMI 707 (996)
T ss_pred -----------------------------HhhhhhhhhhcccCCC-----------------CcEEEEEEEEecCceeEE
Confidence 2378888887766533 22355555655 444568
Q ss_pred EeeccCCCCCCChHHHHhcCCCHHHHHHH--HHHHHHHHHHhcCccccCCCCCCeEEccCCCCceEEEecccccccCHHH
Q 002039 245 ILEFMDGIRLNDCESLEAFGVNKQKVVEE--ITRAYAHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSSSM 322 (977)
Q Consensus 245 VmE~i~G~~L~~~~~~~~~~~~~~~l~~~--l~~~~l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~~~ 322 (977)
++|||+.++|+.+......++..-+++.. .+..-++.+-..|+|||||-..||||+.+ -..++.|||+.+.+.++.
T Consensus 708 iTEyMENGsLDsFLR~~DGqftviQLVgMLrGIAsGMkYLsdm~YVHRDLAARNILVNsn--LvCKVsDFGLSRvledd~ 785 (996)
T KOG0196|consen 708 ITEYMENGSLDSFLRQNDGQFTVIQLVGMLRGIASGMKYLSDMNYVHRDLAARNILVNSN--LVCKVSDFGLSRVLEDDP 785 (996)
T ss_pred EhhhhhCCcHHHHHhhcCCceEeehHHHHHHHHHHHhHHHhhcCchhhhhhhhheeeccc--eEEEeccccceeecccCC
Confidence 99999999999986655444544444443 33444888889999999999999999854 667899999999886543
No 276
>cd07837 STKc_CdkB_plant Catalytic domain of the Serine/Threonine Kinase, Plant B-type Cyclin-Dependent protein Kinase. Serine/Threonine Kinases (STKs), Plant B-type Cyclin-Dependent protein Kinase (CdkB) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CdkB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The plant-specific B-type CDKs are expressed from the late S to the M phase of the cell cycle. They are characterized by the cyclin binding motif PPT[A/T]LRE. They play a role in controlling mitosis and integrating developm
Probab=99.07 E-value=6.4e-10 Score=123.09 Aligned_cols=143 Identities=17% Similarity=0.192 Sum_probs=90.7
Q ss_pred cccccccccEEEEEEec-CCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCcHHHH
Q 002039 124 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (977)
Q Consensus 124 ~piasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea 202 (977)
+-||.|++|.||+|+.+ +|+.||||+.+...... .....+.+|.
T Consensus 7 ~~lg~g~~g~vy~~~~~~~~~~v~lK~~~~~~~~~-----------------------------------~~~~~~~~E~ 51 (295)
T cd07837 7 EKIGEGTYGKVYKARDKNTGKLVALKKTRLEMDEE-----------------------------------GIPPTALREI 51 (295)
T ss_pred eEecccCCeEEEEEEECCCCcEEEEEeehhhcccc-----------------------------------CCchHHHHHH
Confidence 46899999999999974 79999999764321100 0001234455
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeeecC------CceEEeeccCCCCCCChHHHHh----cCCCHHHHHH
Q 002039 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQSS------ETVLILEFMDGIRLNDCESLEA----FGVNKQKVVE 272 (977)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~~~------~~vLVmE~i~G~~L~~~~~~~~----~~~~~~~l~~ 272 (977)
..+..+.+. ...+.+..+.... ..++||||++| ++.+...... ..++...+..
T Consensus 52 ~~l~~l~~~----------------~~i~~~~~~~~~~~~~~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~ 114 (295)
T cd07837 52 SLLQMLSES----------------IYIVRLLDVEHVEEKNGKPSLYLVFEYLDS-DLKKFMDSNGRGPGRPLPAKTIKS 114 (295)
T ss_pred HHHHHccCC----------------CCccceeeeEeecCCCCCceEEEEeeccCc-CHHHHHHHhcccCCCCCCHHHHHH
Confidence 544444320 0112222222211 14899999997 5655432221 1234555555
Q ss_pred HHHHHH--HHHHHhcCccccCCCCCCeEEccCCCCceEEEecccccccC
Q 002039 273 EITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 319 (977)
Q Consensus 273 ~l~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~ 319 (977)
.+.+++ +..+|..|++|+|+||+||+++.+ ++.++|+|||++..+.
T Consensus 115 ~~~qi~~~L~~LH~~~i~H~dl~~~nil~~~~-~~~~kl~dfg~~~~~~ 162 (295)
T cd07837 115 FMYQLLKGVAHCHKHGVMHRDLKPQNLLVDKQ-KGLLKIADLGLGRAFS 162 (295)
T ss_pred HHHHHHHHHHHHHHCCeeecCCChHHEEEecC-CCeEEEeecccceecC
Confidence 555544 788999999999999999999862 4789999999987653
No 277
>KOG1164 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=99.07 E-value=5.1e-10 Score=126.22 Aligned_cols=140 Identities=15% Similarity=0.283 Sum_probs=95.4
Q ss_pred ccccccccccEEEEEEecC--CCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCcHH
Q 002039 123 ETPLATASIAQVHRATLVD--GRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNS 200 (977)
Q Consensus 123 ~~piasaSigqV~~A~l~~--G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~ 200 (977)
.+.||+|+||+||.+...+ .+.+|+|+........- . .+..
T Consensus 23 ~~~iG~G~fG~V~~v~~~~~~~~~~a~K~e~~~~~~~~------------------------------------~-~l~~ 65 (322)
T KOG1164|consen 23 GKKIGEGGFGAVYLVSDKSEKNKEYAKKLEKKELGSKP------------------------------------S-VLKI 65 (322)
T ss_pred eeeccccCCceEEEEEecCCCCeeEEEEEEEecccCCC------------------------------------c-cchh
Confidence 4689999999999999754 35899998754321100 0 1222
Q ss_pred HHHHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeeec-----CCceEEeeccCCCCCCChHHHHh-cCCCHHHHHHHH
Q 002039 201 EAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQS-----SETVLILEFMDGIRLNDCESLEA-FGVNKQKVVEEI 274 (977)
Q Consensus 201 Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~~-----~~~vLVmE~i~G~~L~~~~~~~~-~~~~~~~l~~~l 274 (977)
|...+..+... .....+|.++.. .-+++||+.+ |.+|.++..... ..++...++...
T Consensus 66 E~~vl~~l~~~----------------~~~~~~~~~~~~G~~~~~~~~iVM~l~-G~sL~dl~~~~~~~~fs~~T~l~ia 128 (322)
T KOG1164|consen 66 EIQVLKKLEKK----------------NGPSHFPKLLDHGRSTEDFNFIVMSLL-GPSLEDLRKRNPPGRFSRKTVLRIA 128 (322)
T ss_pred HHHHHHHHhhh----------------cCCCCCCEEEEeccCCCceeEEEEecc-CccHHHHHHhCCCCCcCHhHHHHHH
Confidence 33333333220 112456666642 2469999988 888888753332 346677777777
Q ss_pred HHHH--HHHHHhcCccccCCCCCCeEEccCC-C--CceEEEeccccc
Q 002039 275 TRAY--AHQIYVDGFFNGDPHPGNFLVSKDP-P--HRPILLDFGLTK 316 (977)
Q Consensus 275 ~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~-~--g~i~LiDFG~~~ 316 (977)
++++ ++.+|..|++|||+||+|+++.... . ..+.|+|||+++
T Consensus 129 ~q~l~~l~~lH~~G~iHRDiKp~N~~~g~~~~~~~~~~~llDfGlar 175 (322)
T KOG1164|consen 129 IQNLNALEDLHSKGFIHRDIKPENFVVGQSSRSEVRTLYLLDFGLAR 175 (322)
T ss_pred HHHHHHHHHHHhcCcccCCcCHHHeeecCCCCcccceEEEEecCCCc
Confidence 7766 9999999999999999999998542 1 469999999999
No 278
>cd07879 STKc_p38delta_MAPK13 Catalytic domain of the Serine/Threonine Kinase, p38delta Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38delta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38delta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38delta, also called MAPK13
Probab=99.07 E-value=6.8e-10 Score=126.20 Aligned_cols=153 Identities=18% Similarity=0.250 Sum_probs=94.7
Q ss_pred HHhCCChhhcccccC-ccccccccccEEEEEEe-cCCCEEEEEEecCChh-hhhHhhHHHHHHHHHHHHhhCCCCCCchh
Q 002039 108 REFGESMGGMFMDFV-ETPLATASIAQVHRATL-VDGRQVVVKVQHQGIK-TIILEDLKNAKSIVDWIAWAEPQYDFNPI 184 (977)
Q Consensus 108 ~elg~~~~~~f~~~d-~~piasaSigqV~~A~l-~~G~~VAVKv~~p~i~-~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~ 184 (977)
++.++.+.++...|. .++||+|++|.||+|+. .+|+.||||+.+.... ....
T Consensus 4 ~~~~~~~~~~~~~y~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~------------------------- 58 (342)
T cd07879 4 EEVNKTVWELPERYTSLKQVGSGAYGSVCSAIDKRTGEKVAIKKLSRPFQSEIFA------------------------- 58 (342)
T ss_pred hhhhhhhhccccceEEEEEeeecCCeEEEEEEeCCCCcEEEEEEecCccccccch-------------------------
Confidence 345555555555554 47999999999999997 4799999998653211 1000
Q ss_pred HHHHhhhcccccCcHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeee-------cCCceEEeeccCCCCCCCh
Q 002039 185 IDEWCKEAPKELDFNSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-------SSETVLILEFMDGIRLNDC 257 (977)
Q Consensus 185 ~~e~~~~l~~Eld~~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-------~~~~vLVmE~i~G~~L~~~ 257 (977)
.++.+|.+.+.++.+. .-+.+..++. ....++||||+.+ .+.
T Consensus 59 -----------~~~~~e~~~l~~l~h~-----------------niv~~~~~~~~~~~~~~~~~~~lv~e~~~~-~l~-- 107 (342)
T cd07879 59 -----------KRAYRELTLLKHMQHE-----------------NVIGLLDVFTSAVSGDEFQDFYLVMPYMQT-DLQ-- 107 (342)
T ss_pred -----------hHHHHHHHHHHhcCCC-----------------CccchhheecccccCCCCceEEEEeccccc-CHH--
Confidence 0122333333333210 0111111111 1334899999964 332
Q ss_pred HHHHhcCCCHHHHHHHHHHHH--HHHHHhcCccccCCCCCCeEEccCCCCceEEEecccccccC
Q 002039 258 ESLEAFGVNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 319 (977)
Q Consensus 258 ~~~~~~~~~~~~l~~~l~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~ 319 (977)
......+....+...+.+++ +..+|..|++|+|+||+||+++.+ +.++|+|||++....
T Consensus 108 -~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~i~H~dlkp~NIll~~~--~~~kL~dfg~~~~~~ 168 (342)
T cd07879 108 -KIMGHPLSEDKVQYLVYQMLCGLKYIHSAGIIHRDLKPGNLAVNED--CELKILDFGLARHAD 168 (342)
T ss_pred -HHHcCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCC--CCEEEeeCCCCcCCC
Confidence 22223455555555554444 778999999999999999999865 899999999987654
No 279
>PTZ00284 protein kinase; Provisional
Probab=99.07 E-value=2.2e-10 Score=136.03 Aligned_cols=143 Identities=16% Similarity=0.082 Sum_probs=84.6
Q ss_pred cccccccccEEEEEEec-CCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCcHHHH
Q 002039 124 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (977)
Q Consensus 124 ~piasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea 202 (977)
+.||.|++|.||+|+.. +++.||||+.+.... ... ++..|.
T Consensus 135 ~~lG~G~fg~V~~a~~~~~~~~vAvK~i~~~~~--~~~------------------------------------~~~~e~ 176 (467)
T PTZ00284 135 SLLGEGTFGKVVEAWDRKRKEYCAVKIVRNVPK--YTR------------------------------------DAKIEI 176 (467)
T ss_pred EEEEeccCEEEEEEEEcCCCeEEEEEEEecchh--hHH------------------------------------HHHHHH
Confidence 57999999999999974 688999998753110 000 011222
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeee--cCCceEEeeccCCCCCCChHHHHhcCCCHHHHHHHHHHHH--
Q 002039 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ--SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY-- 278 (977)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~--~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~-- 278 (977)
..++++++.-. ......+.+...+. ....+||||++ |..|.++.. ....+....+...+.+++
T Consensus 177 ~~l~~l~~~~~-----------~~~~~i~~i~~~~~~~~~~~~iv~~~~-g~~l~~~l~-~~~~l~~~~~~~i~~qi~~a 243 (467)
T PTZ00284 177 QFMEKVRQADP-----------ADRFPLMKIQRYFQNETGHMCIVMPKY-GPCLLDWIM-KHGPFSHRHLAQIIFQTGVA 243 (467)
T ss_pred HHHHHHhhcCc-----------ccCcceeeeEEEEEcCCceEEEEEecc-CCCHHHHHH-HcCCCCHHHHHHHHHHHHHH
Confidence 22333322100 00011122333333 24468999988 555554422 222345555555555544
Q ss_pred HHHHHh-cCccccCCCCCCeEEccCC--------------CCceEEEecccccc
Q 002039 279 AHQIYV-DGFFNGDPHPGNFLVSKDP--------------PHRPILLDFGLTKK 317 (977)
Q Consensus 279 l~~i~~-~G~~H~D~hPgNIlv~~~~--------------~g~i~LiDFG~~~~ 317 (977)
+..+|. .||+||||||+|||++.++ .+.++|+|||.+..
T Consensus 244 L~yLH~~~gIiHrDlKP~NILl~~~~~~~~~~~~~~~~~~~~~vkl~DfG~~~~ 297 (467)
T PTZ00284 244 LDYFHTELHLMHTDLKPENILMETSDTVVDPVTNRALPPDPCRVRICDLGGCCD 297 (467)
T ss_pred HHHHHhcCCeecCCCCHHHEEEecCCcccccccccccCCCCceEEECCCCcccc
Confidence 788897 5999999999999998542 12599999997654
No 280
>cd05583 STKc_MSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines
Probab=99.07 E-value=4.6e-10 Score=123.99 Aligned_cols=78 Identities=22% Similarity=0.273 Sum_probs=57.6
Q ss_pred CCceEEeeccCCCCCCChHHHHhcCCCHHHHHHHHHHHH--HHHHHhcCccccCCCCCCeEEccCCCCceEEEecccccc
Q 002039 240 SETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKK 317 (977)
Q Consensus 240 ~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~ 317 (977)
...+|||||++|.+|.+.... ...+....+...+.++. +..+|..|++|+|+||.||+++.+ +.++|+|||++..
T Consensus 78 ~~~~lv~e~~~~~~L~~~~~~-~~~~~~~~~~~~~~ql~~~l~~lH~~~~~H~dl~p~nil~~~~--~~~~l~dfg~~~~ 154 (288)
T cd05583 78 TKLHLILDYVNGGELFTHLYQ-REHFTESEVRVYIAEIVLALDHLHQLGIIYRDIKLENILLDSE--GHVVLTDFGLSKE 154 (288)
T ss_pred CEEEEEEecCCCCcHHHHHhh-cCCcCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHeEECCC--CCEEEEECccccc
Confidence 445799999999888765321 22344444444443433 678899999999999999999865 8899999999876
Q ss_pred cCH
Q 002039 318 LSS 320 (977)
Q Consensus 318 l~~ 320 (977)
+..
T Consensus 155 ~~~ 157 (288)
T cd05583 155 FLA 157 (288)
T ss_pred ccc
Confidence 543
No 281
>cd05098 PTKc_FGFR1 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 1 (FGFR1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR1 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=99.07 E-value=7.4e-10 Score=123.72 Aligned_cols=143 Identities=19% Similarity=0.221 Sum_probs=93.1
Q ss_pred ccccccccccEEEEEEec--------CCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhccc
Q 002039 123 ETPLATASIAQVHRATLV--------DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPK 194 (977)
Q Consensus 123 ~~piasaSigqV~~A~l~--------~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ 194 (977)
.+.||+|++|.||+|+.. ++..||+|+.++..... +.
T Consensus 23 ~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~~aiK~~~~~~~~~---~~-------------------------------- 67 (307)
T cd05098 23 GKPLGEGCFGQVVMAEAIGLDKEKPNRVTKVAVKMLKSDATEK---DL-------------------------------- 67 (307)
T ss_pred eeeeccCCCeeEEEeEEeccCCcccCccceEEEEeccCCCChH---HH--------------------------------
Confidence 368999999999999852 23579999887643211 00
Q ss_pred ccCcHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeee-cCCceEEeeccCCCCCCChHHHHh-----------
Q 002039 195 ELDFNSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLEA----------- 262 (977)
Q Consensus 195 Eld~~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLVmE~i~G~~L~~~~~~~~----------- 262 (977)
-++..|...+.++.+. ..-+.+...+. ....++||||++|.+|.++.....
T Consensus 68 -~~~~~e~~~l~~l~~h----------------~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~ 130 (307)
T cd05098 68 -SDLISEMEMMKMIGKH----------------KNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYCYNPT 130 (307)
T ss_pred -HHHHHHHHHHHHhcCC----------------CCEeeEEEEEecCCceEEEEecCCCCcHHHHHHhcCCcccccccccc
Confidence 0123344444443210 01122222222 456789999999999987753221
Q ss_pred ----cCCCHHHHHHHHHHHH--HHHHHhcCccccCCCCCCeEEccCCCCceEEEecccccccC
Q 002039 263 ----FGVNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 319 (977)
Q Consensus 263 ----~~~~~~~l~~~l~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~ 319 (977)
..++...+...+.++. +..+|..|++|+|+||.||+++.+ +.++|+|||.+..+.
T Consensus 131 ~~~~~~l~~~~~~~~~~qi~~aL~~lH~~gi~H~dlkp~Nill~~~--~~~kL~dfg~a~~~~ 191 (307)
T cd05098 131 QVPEEQLSFKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTED--NVMKIADFGLARDIH 191 (307)
T ss_pred cCccccCCHHHHHHHHHHHHHHHHHHHHCCcccccccHHheEEcCC--CcEEECCCccccccc
Confidence 1234444555555544 788999999999999999999865 899999999987664
No 282
>cd05120 APH_ChoK_like Aminoglycoside 3'-phosphotransferase (APH) and Choline Kinase (ChoK) family. The APH/ChoK family is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). The family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides and macrolides, leads to their inactivation and to bacterial antibiotic resistance. Phosphorylation of choline, ethanolamine, and homoserine serves
Probab=99.07 E-value=1.1e-09 Score=107.48 Aligned_cols=131 Identities=18% Similarity=0.284 Sum_probs=91.3
Q ss_pred cccccccccEEEEEEecCCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCcHHHHH
Q 002039 124 TPLATASIAQVHRATLVDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEAE 203 (977)
Q Consensus 124 ~piasaSigqV~~A~l~~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea~ 203 (977)
++++.|+++.||+++.. +..++||+.++... +.++..|..
T Consensus 4 ~~i~~g~~~~v~~~~~~-~~~~~iK~~~~~~~---------------------------------------~~~~~~e~~ 43 (155)
T cd05120 4 KLLKGGLTNRVYLLGTK-DEDYVLKINPSREK---------------------------------------GADREREVA 43 (155)
T ss_pred eecccccccceEEEEec-CCeEEEEecCCCCc---------------------------------------hhHHHHHHH
Confidence 57899999999999974 48899998765421 113556666
Q ss_pred HHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeee----cCCceEEeeccCCCCCCChHHHHhcCCCHHHHHHHHHHHHH
Q 002039 204 NTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ----SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAYA 279 (977)
Q Consensus 204 n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~----~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~l 279 (977)
.+..+++. ...+|+++. .+..+++|||++|..+..... .....+...+.+. +
T Consensus 44 ~~~~l~~~------------------~~~~p~~~~~~~~~~~~~~v~e~~~g~~~~~~~~-----~~~~~~~~~~~~~-l 99 (155)
T cd05120 44 ILQLLARK------------------GLPVPKVLASGESDGWSYLLMEWIEGETLDEVSE-----EEKEDIAEQLAEL-L 99 (155)
T ss_pred HHHHHHHc------------------CCCCCeEEEEcCCCCccEEEEEecCCeecccCCH-----HHHHHHHHHHHHH-H
Confidence 67766652 234666664 245899999999988875400 0112233333333 5
Q ss_pred HHHHh---cCccccCCCCCCeEEccCCCCceEEEecccccccCH
Q 002039 280 HQIYV---DGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 320 (977)
Q Consensus 280 ~~i~~---~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 320 (977)
..+|. .|++|+|+||+||++++. +.++++|||.+...++
T Consensus 100 ~~lh~~~~~~i~H~Dl~~~Nil~~~~--~~~~l~Df~~~~~~~~ 141 (155)
T cd05120 100 AKLHQLPLLVLCHGDLHPGNILVDDG--KILGIIDWEYAGYGPP 141 (155)
T ss_pred HHHhCCCceEEEecCCCcceEEEECC--cEEEEEecccccCCCh
Confidence 56665 589999999999999854 7899999999886554
No 283
>cd05042 PTKc_Aatyk Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase (Aatyk) subfamily; catalytic (c) domain. The Aatyk subfamily is also referred to as the lemur tyrosine kinase (Lmtk) subfamily. It consists of Aatyk1 (Lmtk1), Aatyk2 (Lmtk2, Brek), Aatyk3 (Lmtk3), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk proteins are mostly receptor tyr kinases (RTKs) containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 does not contain a transmembrane segment and is a cytoplasmic (or nonreceptor) kinase. Aatyk proteins are classified as tyr kina
Probab=99.07 E-value=4.5e-10 Score=122.67 Aligned_cols=78 Identities=18% Similarity=0.103 Sum_probs=56.3
Q ss_pred cCCceEEeeccCCCCCCChHHHHhcC----CCHHHHHHHHHHHH--HHHHHhcCccccCCCCCCeEEccCCCCceEEEec
Q 002039 239 SSETVLILEFMDGIRLNDCESLEAFG----VNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDF 312 (977)
Q Consensus 239 ~~~~vLVmE~i~G~~L~~~~~~~~~~----~~~~~l~~~l~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDF 312 (977)
....+|||||++|.+|.++....... .+...+...+.++. +..+|..|++|+|+||.||+++.+ ++++|+||
T Consensus 67 ~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nill~~~--~~~kl~df 144 (269)
T cd05042 67 SIPYLLVLEFCPLGDLKNYLRSNRGMVAQMAQKDVLQRMACEVASGLLWLHQADFIHSDLALRNCQLTAD--LSVKIGDY 144 (269)
T ss_pred CCceEEEEEeCCCCcHHHHHHhccccccccccHHHHHHHHHHHHHHHHHHHhcCEecccccHhheEecCC--CcEEEecc
Confidence 45678999999999998764321111 12222333333333 678999999999999999999865 89999999
Q ss_pred cccccc
Q 002039 313 GLTKKL 318 (977)
Q Consensus 313 G~~~~l 318 (977)
|++...
T Consensus 145 g~~~~~ 150 (269)
T cd05042 145 GLALEQ 150 (269)
T ss_pred cccccc
Confidence 998654
No 284
>cd05060 PTKc_Syk_like Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, mi
Probab=99.07 E-value=8.9e-10 Score=119.45 Aligned_cols=139 Identities=17% Similarity=0.166 Sum_probs=92.7
Q ss_pred ccccccccEEEEEEec--C--CCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCcHH
Q 002039 125 PLATASIAQVHRATLV--D--GRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNS 200 (977)
Q Consensus 125 piasaSigqV~~A~l~--~--G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~ 200 (977)
-||.|++|+||+|+.. + +..||+|+.+....... +-++.+
T Consensus 2 ~ig~G~~g~v~~~~~~~~~~~~~~~~iK~~~~~~~~~~------------------------------------~~~~~~ 45 (257)
T cd05060 2 ELGHGNFGSVVKGVYLMKSGKEVEVAVKTLKQEHIAAG------------------------------------KKEFLR 45 (257)
T ss_pred ccCccCceeEEEeEeeccCCCcceEEEEecccccchHH------------------------------------HHHHHH
Confidence 4899999999999863 2 37899998765422100 012333
Q ss_pred HHHHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeeecCCceEEeeccCCCCCCChHHHHhcCCCHHHHHHHHHHHH--
Q 002039 201 EAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQSSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY-- 278 (977)
Q Consensus 201 Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~-- 278 (977)
|...+.++.+ ..-+.+...+.....++||||++|.+|.++.... ...+...+...+.+++
T Consensus 46 e~~~l~~l~h-----------------~~iv~~~~~~~~~~~~~v~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~qi~~~ 107 (257)
T cd05060 46 EASVMAQLDH-----------------PCIVRLIGVCKGEPLMLVMELAPLGPLLKYLKKR-REIPVSDLKELAHQVAMG 107 (257)
T ss_pred HHHHHHhcCC-----------------CCeeeEEEEEcCCceEEEEEeCCCCcHHHHHHhC-CCCCHHHHHHHHHHHHHH
Confidence 4444443321 1112232333355678999999999988764322 2355555555555544
Q ss_pred HHHHHhcCccccCCCCCCeEEccCCCCceEEEecccccccC
Q 002039 279 AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 319 (977)
Q Consensus 279 l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~ 319 (977)
+..+|..|++|+|+||.||+++.+ +.++|+|||++..+.
T Consensus 108 l~~lh~~~i~H~di~p~nili~~~--~~~kl~df~~~~~~~ 146 (257)
T cd05060 108 MAYLESKHFVHRDLAARNVLLVNR--HQAKISDFGMSRALG 146 (257)
T ss_pred HHHHhhcCeeccCcccceEEEcCC--CcEEeccccccceee
Confidence 778899999999999999999865 899999999988664
No 285
>cd07841 STKc_CDK7 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is
Probab=99.07 E-value=3.7e-10 Score=125.31 Aligned_cols=145 Identities=19% Similarity=0.220 Sum_probs=93.0
Q ss_pred cccccccccEEEEEEec-CCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCcHHHH
Q 002039 124 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (977)
Q Consensus 124 ~piasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea 202 (977)
+.||.|++|+||+|..+ +|+.||||..+......-... .+-.+..|.
T Consensus 6 ~~lg~g~~~~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~--------------------------------~~~~~~~e~ 53 (298)
T cd07841 6 KKLGEGTYAVVYKARDKETGRIVAIKKIKLGERKEAKDG--------------------------------INFTALREI 53 (298)
T ss_pred eeeeeccccEEEEEEECCCCcEEEEEEEeccccccccch--------------------------------hhHHHHHHH
Confidence 46899999999999974 799999998765432100000 001123344
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeee-cCCceEEeeccCCCCCCChHHHHhcCCCHHHHHHHHHHHH--H
Q 002039 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--A 279 (977)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~--l 279 (977)
..+.++.+ ..-+.+...+. ....++||||+ +.+|.++.......++...+...+.+++ +
T Consensus 54 ~~l~~~~h-----------------~~i~~~~~~~~~~~~~~lv~e~~-~~~L~~~i~~~~~~~~~~~~~~~~~qi~~al 115 (298)
T cd07841 54 KLLQELKH-----------------PNIIGLLDVFGHKSNINLVFEFM-ETDLEKVIKDKSIVLTPADIKSYMLMTLRGL 115 (298)
T ss_pred HHHhhcCC-----------------CCChhhhheeecCCEEEEEEccc-CCCHHHHHhccCCCCCHHHHHHHHHHHHHHH
Confidence 44444321 00112222222 34568999999 7777666332111355555555555544 7
Q ss_pred HHHHhcCccccCCCCCCeEEccCCCCceEEEecccccccCH
Q 002039 280 HQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 320 (977)
Q Consensus 280 ~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 320 (977)
..+|..|++|+|++|.||+++.+ +.++|+|||++..+..
T Consensus 116 ~~lH~~~i~H~dl~p~nill~~~--~~~~l~dfg~~~~~~~ 154 (298)
T cd07841 116 EYLHSNWILHRDLKPNNLLIASD--GVLKLADFGLARSFGS 154 (298)
T ss_pred HHHHhCCeeecCCChhhEEEcCC--CCEEEccceeeeeccC
Confidence 78999999999999999999965 8999999999887643
No 286
>cd05111 PTK_HER3 Pseudokinase domain of the Protein Tyrosine Kinase, HER3. Protein Tyrosine Kinase (PTK) family; HER3 (ErbB3); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER3 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr r
Probab=99.07 E-value=7.4e-10 Score=121.95 Aligned_cols=80 Identities=14% Similarity=0.109 Sum_probs=61.5
Q ss_pred cCCceEEeeccCCCCCCChHHHHhcCCCHHHHHHHHHHHH--HHHHHhcCccccCCCCCCeEEccCCCCceEEEeccccc
Q 002039 239 SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTK 316 (977)
Q Consensus 239 ~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~ 316 (977)
....+++|||+++.+|.++.......++...+...+.++. +..+|..|++|+|+||.||+++.+ +.++|+|||+++
T Consensus 80 ~~~~~~i~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~dlkp~nili~~~--~~~kl~Dfg~~~ 157 (279)
T cd05111 80 GASLQLVTQLSPLGSLLDHVRQHRDSLDPQRLLNWCVQIAKGMYYLEEHRMVHRNLAARNILLKSD--SIVQIADFGVAD 157 (279)
T ss_pred CCccEEEEEeCCCCcHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCCEeccccCcceEEEcCC--CcEEEcCCccce
Confidence 4456799999999999887543333455555555555544 778999999999999999999855 899999999998
Q ss_pred ccCH
Q 002039 317 KLSS 320 (977)
Q Consensus 317 ~l~~ 320 (977)
.+.+
T Consensus 158 ~~~~ 161 (279)
T cd05111 158 LLYP 161 (279)
T ss_pred eccC
Confidence 6643
No 287
>cd05578 STKc_Yank1 Catalytic domain of the Protein Serine/Threonine Kinase, Yank1. Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A.
Probab=99.06 E-value=4.6e-10 Score=121.70 Aligned_cols=141 Identities=13% Similarity=0.150 Sum_probs=93.9
Q ss_pred cccccccccEEEEEEec-CCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCcHHHH
Q 002039 124 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (977)
Q Consensus 124 ~piasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea 202 (977)
++||.|++|.||+|+.. +|+.||+|+........ .+.. -++.+|.
T Consensus 6 ~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~----~~~~------------------------------~~~~~e~ 51 (258)
T cd05578 6 RVIGKGAFGKVCIVQKRDTKKMFAMKYMNKQKCVE----KGSV------------------------------RNVLNER 51 (258)
T ss_pred EEeccCCCceEEEEEEccCCcEEEEEEEehhhhcc----hhHH------------------------------HHHHHHH
Confidence 57999999999999985 69999999875321100 0000 0122333
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceee---e-cCCceEEeeccCCCCCCChHHHHhcCCCHHHHHHHHHHHH
Q 002039 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVI---Q-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY 278 (977)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~---~-~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~ 278 (977)
+.+.++.+ + .++.++ . ....++||||++|.+|.+..... ...+...+...+.+++
T Consensus 52 ~~l~~l~h------------------~--~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~-~~l~~~~~~~~~~~i~ 110 (258)
T cd05578 52 RILQELNH------------------P--FLVNLWYSFQDEENMYLVVDLLLGGDLRYHLSQK-VKFSEEQVKFWICEIV 110 (258)
T ss_pred HHHHhCCC------------------C--ChHHHHHhhcCCCeEEEEEeCCCCCCHHHHHHhc-CCcCHHHHHHHHHHHH
Confidence 33333211 0 112211 1 34568999999999998764322 2455666665555544
Q ss_pred --HHHHHhcCccccCCCCCCeEEccCCCCceEEEecccccccCHH
Q 002039 279 --AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSSS 321 (977)
Q Consensus 279 --l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~~ 321 (977)
+..+|..|++|+|++|.||+++.+ +.++|+|||.+..+...
T Consensus 111 ~~l~~lh~~~i~h~dl~~~nil~~~~--~~~~l~d~~~~~~~~~~ 153 (258)
T cd05578 111 LALEYLHSKGIIHRDIKPDNILLDEQ--GHVHITDFNIATKVTPD 153 (258)
T ss_pred HHHHHHHhCCeeccCCCHHHeEEcCC--CCEEEeecccccccCCC
Confidence 778999999999999999999865 89999999998776543
No 288
>cd06639 STKc_myosinIIIB Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIB myosin. Serine/threonine kinases (STKs), class IIIB myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. Class IIIB myosin is expressed highly in retina. It is also pre
Probab=99.06 E-value=9.2e-10 Score=121.76 Aligned_cols=141 Identities=16% Similarity=0.196 Sum_probs=91.4
Q ss_pred cccccccccEEEEEEe-cCCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCcHHHH
Q 002039 124 TPLATASIAQVHRATL-VDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (977)
Q Consensus 124 ~piasaSigqV~~A~l-~~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea 202 (977)
+.+++|++|.||+|+. .+|+.||||+..+.-.. . . .+.+|.
T Consensus 28 ~~l~~g~~~~vy~~~~~~~~~~~aik~~~~~~~~--~--------------------------~----------~~~~e~ 69 (291)
T cd06639 28 ETIGKGTYGKVYKVTNKKDGSLAAVKILDPISDV--D--------------------------E----------EIEAEY 69 (291)
T ss_pred EEeecCCCeEEEEEEECCCCCEEEEEEecccccH--H--------------------------H----------HHHHHH
Confidence 5799999999999997 47999999987542100 0 0 112333
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeee------cCCceEEeeccCCCCCCChHHH---HhcCCCHHHHHHH
Q 002039 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ------SSETVLILEFMDGIRLNDCESL---EAFGVNKQKVVEE 273 (977)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~------~~~~vLVmE~i~G~~L~~~~~~---~~~~~~~~~l~~~ 273 (977)
..+.++.+. ..-+.+-..+. ....++||||++|.+|.++... .........+...
T Consensus 70 ~~l~~l~~h----------------~ni~~~~~~~~~~~~~~~~~~~lv~ey~~~~sL~~~~~~~~~~~~~~~~~~~~~~ 133 (291)
T cd06639 70 NILQSLPNH----------------PNVVKFYGMFYKADKLVGGQLWLVLELCNGGSVTELVKGLLICGQRLDEAMISYI 133 (291)
T ss_pred HHHHHhcCC----------------CCeEEEEEEEEeccccCCCeeEEEEEECCCCcHHHHHHHhhhcCCCCCHHHHHHH
Confidence 333333110 01122222221 2346899999999999876431 1122344444444
Q ss_pred HHHHH--HHHHHhcCccccCCCCCCeEEccCCCCceEEEecccccccCH
Q 002039 274 ITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 320 (977)
Q Consensus 274 l~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 320 (977)
+.+++ +..+|..|++|+|+||+||+++.+ ++++|+|||++..+..
T Consensus 134 ~~qi~~al~~lH~~~ivH~dlkp~nili~~~--~~~kl~dfg~~~~~~~ 180 (291)
T cd06639 134 LYGALLGLQHLHNNRIIHRDVKGNNILLTTE--GGVKLVDFGVSAQLTS 180 (291)
T ss_pred HHHHHHHHHHHHhCCeeccCCCHHHEEEcCC--CCEEEeecccchhccc
Confidence 44433 788999999999999999999865 8899999999877643
No 289
>cd05110 PTKc_HER4 Catalytic domain of the Protein Tyrosine Kinase, HER4. Protein Tyrosine Kinase (PTK) family; HER4 (ErbB4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER4 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as bindin
Probab=99.06 E-value=6.9e-10 Score=123.77 Aligned_cols=80 Identities=19% Similarity=0.161 Sum_probs=59.1
Q ss_pred cCCceEEeeccCCCCCCChHHHHhcCCCHHHHHHHHHHHH--HHHHHhcCccccCCCCCCeEEccCCCCceEEEeccccc
Q 002039 239 SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTK 316 (977)
Q Consensus 239 ~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~ 316 (977)
.....++|||+++++|.+........+....+...+.++. +..+|..|++|+|+||.||+++.+ +.++|+|||++.
T Consensus 80 ~~~~~~v~e~~~~g~l~~~~~~~~~~~~~~~~~~~~~qi~~~L~~LH~~~ivH~dikp~Nill~~~--~~~kL~Dfg~~~ 157 (303)
T cd05110 80 SPTIQLVTQLMPHGCLLDYVHEHKDNIGSQLLLNWCVQIAKGMMYLEERRLVHRDLAARNVLVKSP--NHVKITDFGLAR 157 (303)
T ss_pred CCCceeeehhcCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHhhcCeeccccccceeeecCC--CceEEccccccc
Confidence 4456799999999888776432222344444444444433 778999999999999999999855 789999999998
Q ss_pred ccCH
Q 002039 317 KLSS 320 (977)
Q Consensus 317 ~l~~ 320 (977)
.+..
T Consensus 158 ~~~~ 161 (303)
T cd05110 158 LLEG 161 (303)
T ss_pred cccC
Confidence 7653
No 290
>cd08229 STKc_Nek7 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 7. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 7 (Nek7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek7 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase.
Probab=99.06 E-value=4.4e-10 Score=122.41 Aligned_cols=143 Identities=18% Similarity=0.145 Sum_probs=91.1
Q ss_pred cccccccccEEEEEEe-cCCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCcHHHH
Q 002039 124 TPLATASIAQVHRATL-VDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (977)
Q Consensus 124 ~piasaSigqV~~A~l-~~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea 202 (977)
+.||+|++|+||+|+. .+|+.|+||.....-. .+.. ...++.+|.
T Consensus 8 ~~ig~g~~g~v~~~~~~~~~~~~~vK~~~~~~~----~~~~------------------------------~~~~~~~e~ 53 (267)
T cd08229 8 KKIGRGQFSEVYRATCLLDGVPVALKKVQIFDL----MDAK------------------------------ARADCIKEI 53 (267)
T ss_pred hhhcccCCeEEEEEeecCCCceEEEEeeeehhh----hhHH------------------------------HHHHHHHHH
Confidence 6799999999999996 5899999996542100 0000 001233444
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeee-cCCceEEeeccCCCCCCChHHHH---hcCCCHHHHHHHHHHHH
Q 002039 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLE---AFGVNKQKVVEEITRAY 278 (977)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLVmE~i~G~~L~~~~~~~---~~~~~~~~l~~~l~~~~ 278 (977)
+.+..+.+ ..-+.+-..+. ....+++|||++|.+|.++.... ....+...+...+.+++
T Consensus 54 ~~l~~~~h-----------------~~i~~~~~~~~~~~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~ 116 (267)
T cd08229 54 DLLKQLNH-----------------PNVIKYYASFIEDNELNIVLELADAGDLSRMIKHFKKQKRLIPEKTVWKYFVQLC 116 (267)
T ss_pred HHHHHccC-----------------CchhhhhheeEeCCeEEEEEEecCCCCHHHHHHHhhccCCCCCHHHHHHHHHHHH
Confidence 44443321 00011111111 34568999999999998764321 11234444444444443
Q ss_pred --HHHHHhcCccccCCCCCCeEEccCCCCceEEEecccccccC
Q 002039 279 --AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 319 (977)
Q Consensus 279 --l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~ 319 (977)
+..+|..|++|+|++|.||+++.+ +.++|+|||++..+.
T Consensus 117 ~~l~~LH~~~i~H~dl~p~nili~~~--~~~~l~dfg~~~~~~ 157 (267)
T cd08229 117 SALEHMHSRRVMHRDIKPANVFITAT--GVVKLGDLGLGRFFS 157 (267)
T ss_pred HHHHHHHHCCeecCCCCHHHEEEcCC--CCEEECcchhhhccc
Confidence 778999999999999999999855 889999999987654
No 291
>cd06617 PKc_MKK3_6 Catalytic domain of the dual-specificity Protein Kinases, MAP kinase kinases 3 and 6. Protein kinases (PKs), MAP kinase kinase 3 (MKK3) and MKK6 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK3 and MKK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK3 and MKK6 are dual-specificity PKs
Probab=99.05 E-value=5.9e-10 Score=122.53 Aligned_cols=142 Identities=14% Similarity=0.189 Sum_probs=89.1
Q ss_pred cccccccccEEEEEEec-CCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCcHHHH
Q 002039 124 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (977)
Q Consensus 124 ~piasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea 202 (977)
+.||.|++|+||+|+.+ +|+.||||+.+....... +.++..|.
T Consensus 7 ~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~------------------------------------~~~~~~e~ 50 (283)
T cd06617 7 EELGRGAYGVVDKMRHVPTGTIMAVKRIRATVNSQE------------------------------------QKRLLMDL 50 (283)
T ss_pred EEecccCCeEEEEEEEcCCCcEEEEEEEecCCCcHH------------------------------------HHHHHHHH
Confidence 56999999999999975 799999998765432110 01111222
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeee-cCCceEEeeccCCCCCCChHHH---HhcCCCHHHHHHHHHHHH
Q 002039 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESL---EAFGVNKQKVVEEITRAY 278 (977)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLVmE~i~G~~L~~~~~~---~~~~~~~~~l~~~l~~~~ 278 (977)
....+. .. ....+.+...+. ....++||||++| +|.++... ....++...+...+.++.
T Consensus 51 ~~~~~~---~~-------------~~~iv~~~~~~~~~~~~~lv~e~~~~-~l~~~l~~~~~~~~~~~~~~~~~~~~qi~ 113 (283)
T cd06617 51 DISMRS---VD-------------CPYTVTFYGALFREGDVWICMEVMDT-SLDKFYKKVYDKGLTIPEDILGKIAVSIV 113 (283)
T ss_pred HHHHHH---cC-------------CCCeeeeeEEEecCCcEEEEhhhhcc-cHHHHHHHhccCCCCCCHHHHHHHHHHHH
Confidence 221111 11 011122222222 5667899999986 44443221 112344555555555544
Q ss_pred --HHHHHhc-CccccCCCCCCeEEccCCCCceEEEecccccccCH
Q 002039 279 --AHQIYVD-GFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 320 (977)
Q Consensus 279 --l~~i~~~-G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 320 (977)
+..+|.. |++|+|+||+||+++.+ +.++|+|||++..+..
T Consensus 114 ~~l~~lH~~~~i~h~dlkp~nil~~~~--~~~kl~dfg~~~~~~~ 156 (283)
T cd06617 114 KALEYLHSKLSVIHRDVKPSNVLINRN--GQVKLCDFGISGYLVD 156 (283)
T ss_pred HHHHHHhhcCCeecCCCCHHHEEECCC--CCEEEeeccccccccc
Confidence 7788887 99999999999999865 8999999999877643
No 292
>cd06622 PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS2-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal PBS2-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=99.05 E-value=5.7e-10 Score=123.05 Aligned_cols=78 Identities=19% Similarity=0.258 Sum_probs=56.9
Q ss_pred CCceEEeeccCCCCCCChHHHH--hcCCCHHHHHHHHHHHH--HHHHHh-cCccccCCCCCCeEEccCCCCceEEEeccc
Q 002039 240 SETVLILEFMDGIRLNDCESLE--AFGVNKQKVVEEITRAY--AHQIYV-DGFFNGDPHPGNFLVSKDPPHRPILLDFGL 314 (977)
Q Consensus 240 ~~~vLVmE~i~G~~L~~~~~~~--~~~~~~~~l~~~l~~~~--l~~i~~-~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~ 314 (977)
...++||||++|.+|..+.... ...++...+...+.+++ +..+|. .|++|+|++|.||+++.+ +.++|+|||+
T Consensus 72 ~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~~i~H~dl~p~nil~~~~--~~~~l~dfg~ 149 (286)
T cd06622 72 GAVYMCMEYMDAGSLDKLYAGGVATEGIPEDVLRRITYAVVKGLKFLKEEHNIIHRDVKPTNVLVNGN--GQVKLCDFGV 149 (286)
T ss_pred CeEEEEEeecCCCCHHHHHHhccccCCCCHHHHHHHHHHHHHHHHHHHhcCCEeeCCCCHHHEEECCC--CCEEEeecCC
Confidence 4457999999999987663321 11345544444444433 667785 699999999999999865 8999999999
Q ss_pred ccccC
Q 002039 315 TKKLS 319 (977)
Q Consensus 315 ~~~l~ 319 (977)
+..+.
T Consensus 150 ~~~~~ 154 (286)
T cd06622 150 SGNLV 154 (286)
T ss_pred ccccc
Confidence 87653
No 293
>cd06630 STKc_MEKK1 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their
Probab=99.05 E-value=6.9e-10 Score=120.87 Aligned_cols=147 Identities=15% Similarity=0.108 Sum_probs=94.9
Q ss_pred cccccccccEEEEEEe-cCCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCcHHHH
Q 002039 124 TPLATASIAQVHRATL-VDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (977)
Q Consensus 124 ~piasaSigqV~~A~l-~~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea 202 (977)
+.||.|++|+||+|+. .+|+.||||+.+........ +.+. .-++.+|+
T Consensus 6 ~~lg~g~~~~v~~~~~~~~~~~~alk~~~~~~~~~~~-~~~~------------------------------~~~~~~e~ 54 (268)
T cd06630 6 QQLGTGAFSSCYQARDVKTGTLMAVKQVTYVRNTSSE-QEEV------------------------------VEALRKEI 54 (268)
T ss_pred ceecCcCceEEEEEEEcCCCcEEEEEEeecccCCchh-HHHH------------------------------HHHHHHHH
Confidence 5689999999999986 58999999987643211100 0000 01234455
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeee-cCCceEEeeccCCCCCCChHHHHhcCCCHHHHHHHHHHHH--H
Q 002039 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--A 279 (977)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~--l 279 (977)
+.+.++++. .-+.+..++. ....++||||++|.+|.++... ...++...+...+.+++ +
T Consensus 55 ~~l~~l~h~-----------------~iv~~~~~~~~~~~~~~v~e~~~~~~L~~~l~~-~~~~~~~~~~~~~~ql~~al 116 (268)
T cd06630 55 RLMARLNHP-----------------HIIRMLGATCEDSHFNLFVEWMAGGSVSHLLSK-YGAFKEAVIINYTEQLLRGL 116 (268)
T ss_pred HHHHHcCCC-----------------ceehhhceeccCCeEEEEEeccCCCcHHHHHHH-hCCCCHHHHHHHHHHHHHHH
Confidence 555554320 0111222222 3456899999999999877432 22344444444444433 6
Q ss_pred HHHHhcCccccCCCCCCeEEccCCCCceEEEecccccccCH
Q 002039 280 HQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 320 (977)
Q Consensus 280 ~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 320 (977)
..+|..|++|+|++|.||+++.+ +..++|+|||.+..+..
T Consensus 117 ~~LH~~~i~H~~i~~~nil~~~~-~~~~~l~dfg~~~~~~~ 156 (268)
T cd06630 117 SYLHENQIIHRDVKGANLLIDST-GQRLRIADFGAAARLAA 156 (268)
T ss_pred HHHHhCCeecCCCCHHHEEEcCC-CCEEEEccccccccccc
Confidence 78999999999999999999754 23699999999887754
No 294
>cd07836 STKc_Pho85 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85. Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment.
Probab=99.05 E-value=8.5e-10 Score=121.32 Aligned_cols=137 Identities=18% Similarity=0.193 Sum_probs=91.7
Q ss_pred cccccccccEEEEEEec-CCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCcHHHH
Q 002039 124 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (977)
Q Consensus 124 ~piasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea 202 (977)
+.||.|++|+||+|+.. +|+.||||+.+....... .-.+.+|+
T Consensus 6 ~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~------------------------------------~~~~~~E~ 49 (284)
T cd07836 6 EKLGEGTYATVYKGRNRTTGEIVALKEIHLDAEEGT------------------------------------PSTAIREI 49 (284)
T ss_pred eeeccCCceEEEEEEECCCCeEEEEEEecccccccc------------------------------------hHHHHHHH
Confidence 57899999999999985 799999998754321100 00123455
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeee----cCCceEEeeccCCCCCCChHHHHh--cCCCHHHHHHHHHH
Q 002039 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ----SSETVLILEFMDGIRLNDCESLEA--FGVNKQKVVEEITR 276 (977)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~----~~~~vLVmE~i~G~~L~~~~~~~~--~~~~~~~l~~~l~~ 276 (977)
..+.++.+ -.+++++. ....+|||||++| +|.++..... ..++...+...+.+
T Consensus 50 ~~l~~l~h--------------------~~i~~~~~~~~~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~q 108 (284)
T cd07836 50 SLMKELKH--------------------ENIVRLHDVIHTENKLMLVFEYMDK-DLKKYMDTHGVRGALDPNTVKSFTYQ 108 (284)
T ss_pred HHHHhhcC--------------------CCEeeeeeeEeeCCcEEEEEecCCc-cHHHHHHhcCCCCCcCHHHHHHHHHH
Confidence 55555432 12333332 4567999999997 5554432111 22455555555555
Q ss_pred HH--HHHHHhcCccccCCCCCCeEEccCCCCceEEEecccccccC
Q 002039 277 AY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 319 (977)
Q Consensus 277 ~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~ 319 (977)
++ +..+|..|++|+|++|.||+++.+ +.++|+|||++..+.
T Consensus 109 i~~~l~~lH~~~i~h~dl~p~ni~~~~~--~~~~l~d~g~~~~~~ 151 (284)
T cd07836 109 LLKGIAFCHENRVLHRDLKPQNLLINKR--GELKLADFGLARAFG 151 (284)
T ss_pred HHHHHHHHHHCCeeeCCCCHHHEEECCC--CcEEEeecchhhhhc
Confidence 44 778899999999999999999855 899999999987553
No 295
>cd06610 STKc_OSR1_SPAK Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase. Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1
Probab=99.05 E-value=8.6e-10 Score=119.81 Aligned_cols=142 Identities=16% Similarity=0.216 Sum_probs=93.8
Q ss_pred cccccccccEEEEEEec-CCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCcHHHH
Q 002039 124 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (977)
Q Consensus 124 ~piasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea 202 (977)
+.||.|++|+||+|... +|+.|+||+........ +.. ++.+|+
T Consensus 7 ~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~---~~~---------------------------------~~~~e~ 50 (267)
T cd06610 7 EVIGVGATAVVYAAICLPNNEKVAIKRIDLEKCQT---SVD---------------------------------ELRKEV 50 (267)
T ss_pred eeecCCCCeEEEEEEEcCCCcEEEEEEeccCCcch---HHH---------------------------------HHHHHH
Confidence 57999999999999964 78999999875321111 100 223444
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeee-cCCceEEeeccCCCCCCChHHHHh--cCCCHHHHHHHHHHHH-
Q 002039 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLEA--FGVNKQKVVEEITRAY- 278 (977)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLVmE~i~G~~L~~~~~~~~--~~~~~~~l~~~l~~~~- 278 (977)
..+..+.+ ...+.+...+. ....++|||+++|.+|.+...... ..++...+...+.+++
T Consensus 51 ~~l~~l~~-----------------~~i~~~~~~~~~~~~~~iv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ql~~ 113 (267)
T cd06610 51 QAMSQCNH-----------------PNVVKYYTSFVVGDELWLVMPYLSGGSLLDIMKSSYPRGGLDEAIIATVLKEVLK 113 (267)
T ss_pred HHHHhcCC-----------------CCEEEEEEEEeeCCEEEEEEeccCCCcHHHHHHHhcccCCCCHHHHHHHHHHHHH
Confidence 43333321 11122222222 456789999999999987754321 2345555444444443
Q ss_pred -HHHHHhcCccccCCCCCCeEEccCCCCceEEEecccccccCH
Q 002039 279 -AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 320 (977)
Q Consensus 279 -l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 320 (977)
+..+|..|++|+|++|.||+++++ +.++|+|||++..+..
T Consensus 114 al~~lh~~~i~h~~l~p~ni~~~~~--~~~~l~df~~~~~~~~ 154 (267)
T cd06610 114 GLEYLHSNGQIHRDIKAGNILLGED--GSVKIADFGVSASLAD 154 (267)
T ss_pred HHHHHHhCCeecCCCCHHhEEEcCC--CCEEEcccchHHHhcc
Confidence 678899999999999999999865 7899999999877654
No 296
>cd05095 PTKc_DDR2 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 2. Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 2 (DDR2) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR2 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR2 binds mostly to fibrillar collagens. More recently, it has been reported to also bind collagen X. DDR2 is widely expressed in many tissues wit
Probab=99.05 E-value=8.9e-10 Score=122.35 Aligned_cols=79 Identities=23% Similarity=0.259 Sum_probs=57.9
Q ss_pred cCCceEEeeccCCCCCCChHHHHhc----------CCCHHHHHHHHHHHH--HHHHHhcCccccCCCCCCeEEccCCCCc
Q 002039 239 SSETVLILEFMDGIRLNDCESLEAF----------GVNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHR 306 (977)
Q Consensus 239 ~~~~vLVmE~i~G~~L~~~~~~~~~----------~~~~~~l~~~l~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~ 306 (977)
....++||||++|.+|.++...... .++...+...+.++. +..+|..|++|+|+||.||+++.+ +.
T Consensus 91 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~i~H~dlkp~Nili~~~--~~ 168 (296)
T cd05095 91 SDPLCMITEYMENGDLNQFLSRHEPQEAAEKADVVTISYSTLIFMATQIASGMKYLSSLNFVHRDLATRNCLVGKN--YT 168 (296)
T ss_pred CCccEEEEEeCCCCcHHHHHHhcCcccccccccccccCHHHHHHHHHHHHHHHHHHHHCCeecccCChheEEEcCC--CC
Confidence 4567899999999999876432111 122233444444433 788999999999999999999855 88
Q ss_pred eEEEecccccccC
Q 002039 307 PILLDFGLTKKLS 319 (977)
Q Consensus 307 i~LiDFG~~~~l~ 319 (977)
++|+|||++..+.
T Consensus 169 ~~l~dfg~~~~~~ 181 (296)
T cd05095 169 IKIADFGMSRNLY 181 (296)
T ss_pred EEeccCccccccc
Confidence 9999999987653
No 297
>cd06623 PKc_MAPKK_plant_like Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of
Probab=99.04 E-value=1.1e-09 Score=118.71 Aligned_cols=141 Identities=18% Similarity=0.183 Sum_probs=97.1
Q ss_pred cccccccccEEEEEEec-CCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCcHHHH
Q 002039 124 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (977)
Q Consensus 124 ~piasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea 202 (977)
+.||.|++|.||+|+.+ +|+.|+||+.++....... -++.+|.
T Consensus 7 ~~i~~g~~~~v~~~~~~~~~~~~~vk~~~~~~~~~~~------------------------------------~~~~~e~ 50 (264)
T cd06623 7 KVLGQGSSGVVYKVRHKPTGKIYALKKIHVDGDEEFR------------------------------------KQLLREL 50 (264)
T ss_pred eeeeecCCeEEEEEEEcCCCcEEEEEEeccCcchHHH------------------------------------HHHHHHH
Confidence 67999999999999985 6999999987654321000 0233444
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeee-cCCceEEeeccCCCCCCChHHHHhcCCCHHHHHHHHHHHH--H
Q 002039 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--A 279 (977)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~--l 279 (977)
+.+.++++ ..-+.+...+. ....++||||++|.+|.++.... ..++...+...+.+++ +
T Consensus 51 ~~l~~l~~-----------------~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~-~~l~~~~~~~~~~~l~~~l 112 (264)
T cd06623 51 KTLRSCES-----------------PYVVKCYGAFYKEGEISIVLEYMDGGSLADLLKKV-GKIPEPVLAYIARQILKGL 112 (264)
T ss_pred HHHHhcCC-----------------CCeeeEEEEEccCCeEEEEEEecCCCcHHHHHHHc-CCCCHHHHHHHHHHHHHHH
Confidence 44444431 11122222222 45678999999999998874322 3455555555544444 7
Q ss_pred HHHHh-cCccccCCCCCCeEEccCCCCceEEEecccccccCH
Q 002039 280 HQIYV-DGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 320 (977)
Q Consensus 280 ~~i~~-~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 320 (977)
..+|. .|++|+|+||.||+++.+ +.++|+|||.+..+..
T Consensus 113 ~~lh~~~~~~H~~l~~~ni~~~~~--~~~~l~df~~~~~~~~ 152 (264)
T cd06623 113 DYLHTKRHIIHRDIKPSNLLINSK--GEVKIADFGISKVLEN 152 (264)
T ss_pred HHHhccCCCccCCCCHHHEEECCC--CCEEEccCccceeccc
Confidence 78999 999999999999999865 8999999999887643
No 298
>cd05091 PTKc_Ror2 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 2. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 2 (Ror2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly
Probab=99.04 E-value=8.5e-10 Score=121.43 Aligned_cols=80 Identities=14% Similarity=0.172 Sum_probs=58.3
Q ss_pred cCCceEEeeccCCCCCCChHHHHh---------------cCCCHHHHHHHHHHHH--HHHHHhcCccccCCCCCCeEEcc
Q 002039 239 SSETVLILEFMDGIRLNDCESLEA---------------FGVNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSK 301 (977)
Q Consensus 239 ~~~~vLVmE~i~G~~L~~~~~~~~---------------~~~~~~~l~~~l~~~~--l~~i~~~G~~H~D~hPgNIlv~~ 301 (977)
....++++||+++.+|.++..... ..++...+...+.++. +..+|..|++|+|+||.||++++
T Consensus 80 ~~~~~~~~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ql~~aL~~lH~~gi~H~dlkp~Nil~~~ 159 (283)
T cd05091 80 EQPLSMIFSYCSHSDLHEFLVMRSPHSDVGSTDDDKTVKSTLEPADFVHIVTQIAAGMEFLSSHHVVHKDLATRNVLVFD 159 (283)
T ss_pred CCceEEEEEcCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHHcCccccccchhheEecC
Confidence 355689999999988877643221 1123333444444433 78899999999999999999986
Q ss_pred CCCCceEEEecccccccCH
Q 002039 302 DPPHRPILLDFGLTKKLSS 320 (977)
Q Consensus 302 ~~~g~i~LiDFG~~~~l~~ 320 (977)
+ +.++|+|||+++.+..
T Consensus 160 ~--~~~kl~Dfg~~~~~~~ 176 (283)
T cd05091 160 K--LNVKISDLGLFREVYA 176 (283)
T ss_pred C--CceEeccccccccccc
Confidence 5 8899999999887643
No 299
>cd06614 STKc_PAK Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two grou
Probab=99.04 E-value=1e-09 Score=121.15 Aligned_cols=148 Identities=18% Similarity=0.212 Sum_probs=99.8
Q ss_pred hhhcccccCccccccccccEEEEEEec-CCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhc
Q 002039 114 MGGMFMDFVETPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEA 192 (977)
Q Consensus 114 ~~~~f~~~d~~piasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l 192 (977)
..+.|+.. +.++.|++|+||+|... +++.|++|+.+.... +
T Consensus 17 ~~~~~~~~--~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~-----~------------------------------- 58 (286)
T cd06614 17 PRELYKNL--EKIGEGASGEVYKATDRATGKEVAIKKMRLRKQ-----N------------------------------- 58 (286)
T ss_pred ccccchHh--HhccCCCCeEEEEEEEccCCcEEEEEEEecCch-----h-------------------------------
Confidence 34444433 67999999999999985 789999998765432 0
Q ss_pred ccccCcHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeee-cCCceEEeeccCCCCCCChHHHHhcCCCHHHHH
Q 002039 193 PKELDFNSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVV 271 (977)
Q Consensus 193 ~~Eld~~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~ 271 (977)
+-.+.+|...+.++.+ ..-+.+...+. ....+++|||++|.+|.++.......++...+.
T Consensus 59 --~~~~~~e~~~l~~l~~-----------------~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~l~~~~~~ 119 (286)
T cd06614 59 --KELIINEILIMKDCKH-----------------PNIVDYYDSYLVGDELWVVMEYMDGGSLTDIITQNFVRMNEPQIA 119 (286)
T ss_pred --HHHHHHHHHHHHHCCC-----------------CCeeEEEEEEEECCEEEEEEeccCCCcHHHHHHHhccCCCHHHHH
Confidence 0012234333333321 11122333332 566789999999999998754332245555555
Q ss_pred HHHHHHH--HHHHHhcCccccCCCCCCeEEccCCCCceEEEecccccccCH
Q 002039 272 EEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 320 (977)
Q Consensus 272 ~~l~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 320 (977)
..+.+++ +..+|..|++|+|++|.||+++.+ +.++|+|||.+..+..
T Consensus 120 ~i~~~i~~~L~~lH~~gi~H~dl~p~ni~i~~~--~~~~l~d~~~~~~~~~ 168 (286)
T cd06614 120 YVCREVLQGLEYLHSQNVIHRDIKSDNILLSKD--GSVKLADFGFAAQLTK 168 (286)
T ss_pred HHHHHHHHHHHHHHhCCeeeCCCChhhEEEcCC--CCEEECccchhhhhcc
Confidence 5555544 778899999999999999999855 8999999998876544
No 300
>cd05574 STKc_phototropin_like Catalytic domain of Phototropin-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Phototropin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The phototropin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Included in this subfamily are plant phototropins and predominantly uncharacterized fungal STKs whose catalytic domains resemble the phototropin kinase domain. One protein from Neurospora crassa is called nrc-2. Phototropins are blue-light receptors that control responses such as phototropism, stromatal opening, and chloroplast movement in order to optimize the photosynthetic efficiency of plants. They are light-activated STKs that contain an N-termin
Probab=99.04 E-value=7.4e-10 Score=124.15 Aligned_cols=141 Identities=16% Similarity=0.188 Sum_probs=93.3
Q ss_pred cccccccccEEEEEEec-CCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCcHHHH
Q 002039 124 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (977)
Q Consensus 124 ~piasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea 202 (977)
+.||.|++|.||+|+.. +|+.||||...+...... ... -.+..|.
T Consensus 7 ~~ig~g~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~-~~~---------------------------------~~~~~e~ 52 (316)
T cd05574 7 KLLGKGDVGRVFLVRLKGTGKLFALKVLDKKEMIKR-NKV---------------------------------KRVLTEQ 52 (316)
T ss_pred eeecCCccEEEEEEEEcCCCcEEEEEEEeccccchH-HHH---------------------------------HHHHHHH
Confidence 56999999999999975 599999998764321100 000 0123344
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeee----cCCceEEeeccCCCCCCChHHHHh-cCCCHHHHHHHHHHH
Q 002039 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ----SSETVLILEFMDGIRLNDCESLEA-FGVNKQKVVEEITRA 277 (977)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~----~~~~vLVmE~i~G~~L~~~~~~~~-~~~~~~~l~~~l~~~ 277 (977)
+.+.++.+ ..|++++. ....++||||++|.+|.++..... ..++...+...+.++
T Consensus 53 ~~l~~l~~--------------------~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~l~~~~~~~~~~qi 112 (316)
T cd05574 53 EILATLDH--------------------PFLPTLYASFQTETYLCLVMDYCPGGELFRLLQRQPGKCLSEEVARFYAAEV 112 (316)
T ss_pred HHHHhCCC--------------------CCchhheeeeecCCEEEEEEEecCCCCHHHHHHhCCCCccCHHHHHHHHHHH
Confidence 44443321 12333332 455689999999999987643211 234444444444443
Q ss_pred H--HHHHHhcCccccCCCCCCeEEccCCCCceEEEecccccccCH
Q 002039 278 Y--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 320 (977)
Q Consensus 278 ~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 320 (977)
+ +..+|..|++|+|+||.||+++.+ +.++|+|||++.....
T Consensus 113 ~~~l~~lH~~~i~H~dlkp~Nili~~~--~~~~l~dfg~~~~~~~ 155 (316)
T cd05574 113 LLALEYLHLLGIVYRDLKPENILLHES--GHIMLSDFDLSKQSDV 155 (316)
T ss_pred HHHHHHHHHCCeeccCCChHHeEEcCC--CCEEEeecchhhcccc
Confidence 3 678899999999999999999865 8999999999876643
No 301
>cd06633 STKc_TAO3 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3. Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a co
Probab=99.04 E-value=8.8e-10 Score=123.64 Aligned_cols=153 Identities=17% Similarity=0.164 Sum_probs=96.9
Q ss_pred hCCChhhcccccCccccccccccEEEEEEec-CCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHH
Q 002039 110 FGESMGGMFMDFVETPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEW 188 (977)
Q Consensus 110 lg~~~~~~f~~~d~~piasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~ 188 (977)
++.+++++|..+. .+|.|++|.||+|+.. +|+.|+||+........- ..
T Consensus 15 ~~~~~~~~~~~~~--~lg~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~~~-~~--------------------------- 64 (313)
T cd06633 15 YKDDPEEIFVGLH--EIGHGSFGAVYFATNSHTNEVVAVKKMSYSGKQTN-EK--------------------------- 64 (313)
T ss_pred ccCCHHHHhhcce--eeccCCCeEEEEEEECCCCcEEEEEEEeccccCch-HH---------------------------
Confidence 3467777776654 4999999999999974 789999998753211000 00
Q ss_pred hhhcccccCcHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeee-cCCceEEeeccCCCCCCChHHHHhcCCCH
Q 002039 189 CKEAPKELDFNSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAFGVNK 267 (977)
Q Consensus 189 ~~~l~~Eld~~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLVmE~i~G~~L~~~~~~~~~~~~~ 267 (977)
..++.+|...+.++++ ..-+.+..++. ....++||||+.| ++.+........++.
T Consensus 65 ------~~~~~~E~~~l~~l~h-----------------~~iv~~~~~~~~~~~~~lv~e~~~~-~l~~~l~~~~~~l~~ 120 (313)
T cd06633 65 ------WQDIIKEVKFLQQLKH-----------------PNTIEYKGCYLKEHTAWLVMEYCLG-SASDLLEVHKKPLQE 120 (313)
T ss_pred ------HHHHHHHHHHHHhCCC-----------------CCCccEEEEEEeCCEEEEEEecCCC-CHHHHHHhcCCCCCH
Confidence 0023344444444422 11122233332 4557899999976 444433222233455
Q ss_pred HHHHHHHHHHH--HHHHHhcCccccCCCCCCeEEccCCCCceEEEeccccccc
Q 002039 268 QKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKL 318 (977)
Q Consensus 268 ~~l~~~l~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l 318 (977)
..+...+.+++ +..+|..|++|+|++|.||+++.+ +.++|+|||++...
T Consensus 121 ~~~~~~~~qi~~al~~LH~~gi~H~dl~p~nili~~~--~~~kL~dfg~~~~~ 171 (313)
T cd06633 121 VEIAAITHGALQGLAYLHSHNMIHRDIKAGNILLTEP--GQVKLADFGSASKS 171 (313)
T ss_pred HHHHHHHHHHHHHHHHHHHCCeecCCCChhhEEECCC--CCEEEeecCCCccc
Confidence 55544444433 678899999999999999999865 88999999987643
No 302
>KOG1166 consensus Mitotic checkpoint serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=99.04 E-value=5.6e-10 Score=137.23 Aligned_cols=141 Identities=20% Similarity=0.208 Sum_probs=91.7
Q ss_pred cccccccccEEEEEEecCCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCcHHHHH
Q 002039 124 TPLATASIAQVHRATLVDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEAE 203 (977)
Q Consensus 124 ~piasaSigqV~~A~l~~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea~ 203 (977)
+-+|.||+|+||+|+..+|+.|||||++|-..-.+-.=.+++.+|. ..+..
T Consensus 704 ~e~G~g~y~~vy~a~~~~~~~~alK~e~P~~~WEfYI~~q~~~RLk-----------------------------~~~~~ 754 (974)
T KOG1166|consen 704 KEIGEGSYGSVYVATHSNGKLVALKVEKPPNPWEFYICLQVMERLK-----------------------------PQMLP 754 (974)
T ss_pred eeeccccceEEEEeecCCCcEEEEEeecCCCceeeeehHHHHHhhc-----------------------------hhhhc
Confidence 6799999999999998889999999999865432221112111111 00001
Q ss_pred HHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeeecCCceEEeeccCCCCCCChHHHHhcCCCHHHHHHHHHHHH--HHH
Q 002039 204 NTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQSSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--AHQ 281 (977)
Q Consensus 204 n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~--l~~ 281 (977)
-+..+...+ + ..+.-+||+||.+=++|-|+.. .....+..-++-..++++ +++
T Consensus 755 ~~~~~~~a~-----------------------~-~~~~S~lv~ey~~~Gtlld~~N-~~~~m~e~lv~~~~~qml~ive~ 809 (974)
T KOG1166|consen 755 SIMHISSAH-----------------------V-FQNASVLVSEYSPYGTLLDLIN-TNKVMDEYLVMFFSCQMLRIVEH 809 (974)
T ss_pred chHHHHHHH-----------------------c-cCCcceeeeeccccccHHHhhc-cCCCCCchhhhHHHHHHHHHHHH
Confidence 111111111 0 1455689999999889888743 223344444444445544 899
Q ss_pred HHhcCccccCCCCCCeEEccC-----CCCceEEEeccccccc
Q 002039 282 IYVDGFFNGDPHPGNFLVSKD-----PPHRPILLDFGLTKKL 318 (977)
Q Consensus 282 i~~~G~~H~D~hPgNIlv~~~-----~~g~i~LiDFG~~~~l 318 (977)
||..||||+||||.|+|++.. +..-|.|||||.+-.+
T Consensus 810 lH~~~IIHgDiKPDNfll~~~~~~~~~~~~l~lIDfG~siDm 851 (974)
T KOG1166|consen 810 LHAMGIIHGDIKPDNFLLRREICADSDSKGLYLIDFGRSIDM 851 (974)
T ss_pred HHhcceecccCCcceeEeecccCCCCcccceEEEecccceee
Confidence 999999999999999999742 1235899999986544
No 303
>cd07850 STKc_JNK Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase (JNK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. They are also essential regulators of physiological and pathological processes and are involved in the pathogenesis of several diseases such as diabetes, atherosclerosis, stroke, Parkinson's and Alzheimer's. Vetebrates harbor three different JNK
Probab=99.04 E-value=7.1e-10 Score=126.61 Aligned_cols=74 Identities=22% Similarity=0.446 Sum_probs=54.8
Q ss_pred CceEEeeccCCCCCCChHHHHhcCCCHHHHHHHHHHHH--HHHHHhcCccccCCCCCCeEEccCCCCceEEEeccccccc
Q 002039 241 ETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKL 318 (977)
Q Consensus 241 ~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l 318 (977)
..++||||++| +|.+.. . ..++...+...+.+++ +..+|..|++|+|+||+||+++.+ +.++|+|||++..+
T Consensus 95 ~~~lv~e~~~~-~l~~~~--~-~~l~~~~~~~~~~ql~~aL~~LH~~gi~H~dlkp~Nil~~~~--~~~kL~Dfg~~~~~ 168 (353)
T cd07850 95 DVYLVMELMDA-NLCQVI--Q-MDLDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSD--CTLKILDFGLARTA 168 (353)
T ss_pred cEEEEEeccCC-CHHHHH--h-hcCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHEEECCC--CCEEEccCccceeC
Confidence 35899999986 444332 1 1245555544444443 788999999999999999999865 89999999999876
Q ss_pred CH
Q 002039 319 SS 320 (977)
Q Consensus 319 ~~ 320 (977)
..
T Consensus 169 ~~ 170 (353)
T cd07850 169 GT 170 (353)
T ss_pred CC
Confidence 43
No 304
>cd06607 STKc_TAO Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins. Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily
Probab=99.04 E-value=8.5e-10 Score=123.25 Aligned_cols=151 Identities=17% Similarity=0.141 Sum_probs=94.1
Q ss_pred ChhhcccccCccccccccccEEEEEEec-CCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhh
Q 002039 113 SMGGMFMDFVETPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKE 191 (977)
Q Consensus 113 ~~~~~f~~~d~~piasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~ 191 (977)
.+.+.|... +.+|.|++|.||+|+.. +|+.||||+......... +
T Consensus 12 ~~~~~y~~~--~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~~~~~~---------------------------~----- 57 (307)
T cd06607 12 DPEKLFTDL--REIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSN---------------------------E----- 57 (307)
T ss_pred Ccchhhhhh--eeecCCCCeEEEEEEEcCCCcEEEEEEEeccccCcH---------------------------H-----
Confidence 344455543 46999999999999974 799999997642211000 0
Q ss_pred cccccCcHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeee-cCCceEEeeccCCCCCCChHHHHhcCCCHHHH
Q 002039 192 APKELDFNSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAFGVNKQKV 270 (977)
Q Consensus 192 l~~Eld~~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l 270 (977)
..-++.+|...+..+.+ ...+.+...+. ....+|||||++|. +.+.........+...+
T Consensus 58 --~~~~~~~Ei~~l~~l~h-----------------~niv~~~~~~~~~~~~~lv~e~~~g~-l~~~~~~~~~~l~~~~~ 117 (307)
T cd06607 58 --KWQDIIKEVRFLQQLRH-----------------PNTIEYKGCYLREHTAWLVMEYCLGS-ASDILEVHKKPLQEVEI 117 (307)
T ss_pred --HHHHHHHHHHHHHhCCC-----------------CCEEEEEEEEEeCCeEEEEHHhhCCC-HHHHHHHcccCCCHHHH
Confidence 00023344444444321 11233333333 45678999999873 33332222223455554
Q ss_pred HHHHHHHH--HHHHHhcCccccCCCCCCeEEccCCCCceEEEecccccccC
Q 002039 271 VEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 319 (977)
Q Consensus 271 ~~~l~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~ 319 (977)
...+.++. +..+|..|++|+|++|.||+++.+ +.++|+|||++...+
T Consensus 118 ~~~~~ql~~~L~~LH~~~i~H~dl~p~nIl~~~~--~~~kL~dfg~~~~~~ 166 (307)
T cd06607 118 AAICHGALQGLAYLHSHERIHRDIKAGNILLTEP--GTVKLADFGSASLVS 166 (307)
T ss_pred HHHHHHHHHHHHHHHHCCceecCCCcccEEECCC--CCEEEeecCcceecC
Confidence 44444433 778899999999999999999865 899999999987654
No 305
>PHA03207 serine/threonine kinase US3; Provisional
Probab=99.04 E-value=5.4e-10 Score=129.55 Aligned_cols=134 Identities=16% Similarity=0.189 Sum_probs=87.6
Q ss_pred cccccccccEEEEEEec---CCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCcHH
Q 002039 124 TPLATASIAQVHRATLV---DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNS 200 (977)
Q Consensus 124 ~piasaSigqV~~A~l~---~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~ 200 (977)
+.||.|++|.||+|+.+ +++.||||+...+. .+.+
T Consensus 98 ~~Lg~G~~g~Vy~~~~~~~~~~~~v~vK~~~~~~------------------------------------------~~~~ 135 (392)
T PHA03207 98 SSLTPGSEGEVFVCTKHGDEQRKKVIVKAVTGGK------------------------------------------TPGR 135 (392)
T ss_pred EeecCCCCeEEEEEEEcCCccceeEEEEeccccc------------------------------------------cHHH
Confidence 67999999999999863 46889999764321 1123
Q ss_pred HHHHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeee-cCCceEEeeccCCCCCCChHHHHhcCCCHHHHHHHHHHHH-
Q 002039 201 EAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY- 278 (977)
Q Consensus 201 Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~- 278 (977)
|.+.+.++.+ ...+.+-..+. ....++|||++.| .|.+... ....+....+...+.+++
T Consensus 136 E~~il~~l~h-----------------~~iv~~~~~~~~~~~~~lv~e~~~~-~l~~~l~-~~~~l~~~~~~~i~~ql~~ 196 (392)
T PHA03207 136 EIDILKTISH-----------------RAIINLIHAYRWKSTVCMVMPKYKC-DLFTYVD-RSGPLPLEQAITIQRRLLE 196 (392)
T ss_pred HHHHHHhcCC-----------------CCccceeeeEeeCCEEEEEehhcCC-CHHHHHH-hcCCCCHHHHHHHHHHHHH
Confidence 4444444322 00111112222 4456899999975 3433321 223345555555555544
Q ss_pred -HHHHHhcCccccCCCCCCeEEccCCCCceEEEecccccccCH
Q 002039 279 -AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 320 (977)
Q Consensus 279 -l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 320 (977)
+..+|..|++|||+||.|||++.+ +.++|+|||++..+..
T Consensus 197 aL~~LH~~givHrDlkp~Nill~~~--~~~~l~DfG~a~~~~~ 237 (392)
T PHA03207 197 ALAYLHGRGIIHRDVKTENIFLDEP--ENAVLGDFGAACKLDA 237 (392)
T ss_pred HHHHHHHCCccccCCCHHHEEEcCC--CCEEEccCccccccCc
Confidence 788999999999999999999865 8999999999876643
No 306
>PLN03224 probable serine/threonine protein kinase; Provisional
Probab=99.04 E-value=1.2e-09 Score=128.89 Aligned_cols=77 Identities=18% Similarity=0.255 Sum_probs=54.3
Q ss_pred CCceEEeeccCCCCCCChHHHHhc-----------------------CCCHHHHHHHHHHHH--HHHHHhcCccccCCCC
Q 002039 240 SETVLILEFMDGIRLNDCESLEAF-----------------------GVNKQKVVEEITRAY--AHQIYVDGFFNGDPHP 294 (977)
Q Consensus 240 ~~~vLVmE~i~G~~L~~~~~~~~~-----------------------~~~~~~l~~~l~~~~--l~~i~~~G~~H~D~hP 294 (977)
...+|||||+++.+|.++...... ..+...+...+.++. +..+|..|++|+|+||
T Consensus 258 ~~~~LV~Ey~~~gsL~~~L~~~~~~~~~~L~e~l~~g~~l~~~~~~~~~~~~~~~~i~~ql~~aL~~lH~~~ivHrDLKp 337 (507)
T PLN03224 258 GSQWLVWKFESDATLGDALDGKLGPFPGCLEEFMMAGKKIPDNMPQDKRDINVIKGVMRQVLTGLRKLHRIGIVHRDIKP 337 (507)
T ss_pred CceEEEEEcCCCCcHHHHHhhccCCCcchHHHHHhcCCchhhhcccccCCHHHHHHHHHHHHHHHHHHHHCCeecCCCch
Confidence 456899999999998776431100 011122222222322 6788999999999999
Q ss_pred CCeEEccCCCCceEEEeccccccc
Q 002039 295 GNFLVSKDPPHRPILLDFGLTKKL 318 (977)
Q Consensus 295 gNIlv~~~~~g~i~LiDFG~~~~l 318 (977)
.|||++.+ +.++|+|||++..+
T Consensus 338 ~NILl~~~--~~~kL~DFGla~~~ 359 (507)
T PLN03224 338 ENLLVTVD--GQVKIIDFGAAVDM 359 (507)
T ss_pred HhEEECCC--CcEEEEeCcCcccc
Confidence 99999865 88999999998654
No 307
>cd06626 STKc_MEKK4 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4
Probab=99.04 E-value=7.9e-10 Score=119.98 Aligned_cols=139 Identities=14% Similarity=0.178 Sum_probs=92.5
Q ss_pred cccccccccEEEEEEec-CCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCcHHHH
Q 002039 124 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (977)
Q Consensus 124 ~piasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea 202 (977)
+.||+|++|.||+|+.. +++.|+||+.+..... ..+.+ .+..|.
T Consensus 6 ~~lg~G~~~~v~~~~~~~~~~~~~ik~~~~~~~~--~~~~~---------------------------------~~~~e~ 50 (264)
T cd06626 6 NKIGGGTFGKVYTAVNLDTGELMAVKEIRIQDND--PKTIK---------------------------------EIADEM 50 (264)
T ss_pred eEeecCCCcEEEEEEECCCCcEEEEEEEECcccc--hHHHH---------------------------------HHHHHH
Confidence 67999999999999974 7899999997654321 00000 123333
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceee---e-cCCceEEeeccCCCCCCChHHHHhcCCCHHHHHHHHHHHH
Q 002039 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVI---Q-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY 278 (977)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~---~-~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~ 278 (977)
..+.++++ ..|.+++ . ....++||||++|.+|.++.... ...+...+...+.+++
T Consensus 51 ~~~~~l~~--------------------~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~-~~~~~~~~~~i~~~i~ 109 (264)
T cd06626 51 KVLELLKH--------------------PNLVKYYGVEVHREKVYIFMEYCSGGTLEELLEHG-RILDEHVIRVYTLQLL 109 (264)
T ss_pred HHHHhCCC--------------------CChhheeeeEecCCEEEEEEecCCCCcHHHHHhhc-CCCChHHHHHHHHHHH
Confidence 33333321 1122222 1 45568999999999998874321 1234444444333333
Q ss_pred --HHHHHhcCccccCCCCCCeEEccCCCCceEEEecccccccCH
Q 002039 279 --AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 320 (977)
Q Consensus 279 --l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 320 (977)
+..+|..|++|+|++|+||+++.+ +.++|+|||.+..+..
T Consensus 110 ~~l~~lh~~~i~H~dl~~~nil~~~~--~~~kl~d~g~~~~~~~ 151 (264)
T cd06626 110 EGLAYLHSHGIVHRDIKPANIFLDHN--GVIKLGDFGCAVKLKN 151 (264)
T ss_pred HHHHHHHHCCcccCCCCHHHEEECCC--CCEEEcccccccccCC
Confidence 678899999999999999999865 8999999999887754
No 308
>cd06636 STKc_MAP4K4_6 Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Ea
Probab=99.03 E-value=1e-09 Score=120.64 Aligned_cols=77 Identities=16% Similarity=0.227 Sum_probs=56.8
Q ss_pred CceEEeeccCCCCCCChHHHHh-cCCCHHHHHHHHHHHH--HHHHHhcCccccCCCCCCeEEccCCCCceEEEecccccc
Q 002039 241 ETVLILEFMDGIRLNDCESLEA-FGVNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKK 317 (977)
Q Consensus 241 ~~vLVmE~i~G~~L~~~~~~~~-~~~~~~~l~~~l~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~ 317 (977)
..+++|||++|.+|.++..... ...+...+...+.++. +..+|..|++|+|+||.||+++.+ +.++|+|||++..
T Consensus 93 ~~~iv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~~ivH~dl~~~nili~~~--~~~~l~dfg~~~~ 170 (282)
T cd06636 93 QLWLVMEFCGAGSVTDLVKNTKGNALKEDWIAYICREILRGLAHLHAHKVIHRDIKGQNVLLTEN--AEVKLVDFGVSAQ 170 (282)
T ss_pred EEEEEEEeCCCCcHHHHHHHccCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCC--CCEEEeeCcchhh
Confidence 3479999999999987654322 1234433433333333 678899999999999999999865 8899999999876
Q ss_pred cC
Q 002039 318 LS 319 (977)
Q Consensus 318 l~ 319 (977)
+.
T Consensus 171 ~~ 172 (282)
T cd06636 171 LD 172 (282)
T ss_pred hh
Confidence 54
No 309
>cd05572 STKc_cGK_PKG Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase. Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowi
Probab=99.03 E-value=1.4e-09 Score=118.12 Aligned_cols=142 Identities=18% Similarity=0.139 Sum_probs=93.2
Q ss_pred cccccccEEEEEEec-CCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCcHHHHHH
Q 002039 126 LATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEAEN 204 (977)
Q Consensus 126 iasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea~n 204 (977)
||.|++|.||+|+.. +++.||||+..+.....- + .+-.+.+|...
T Consensus 1 lg~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~----------------------------~------~~~~~~~e~~~ 46 (262)
T cd05572 1 LGVGGFGRVELVKVKSKNRTFALKCVKKRHIVET----------------------------G------QQEHIFSEKEI 46 (262)
T ss_pred CCCCCceEEEEEEECCCCcEEEEEEEehhcchhh----------------------------h------HHHHHHHHHHH
Confidence 689999999999984 689999998754211000 0 00123445444
Q ss_pred HHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeee-cCCceEEeeccCCCCCCChHHHHhcCCCHHHHHHHHHHHH--HHH
Q 002039 205 TRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--AHQ 281 (977)
Q Consensus 205 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~--l~~ 281 (977)
+.++.+ ..-+.+...+. ....+++|||++|.+|.+...- ........+...+.+++ +..
T Consensus 47 l~~l~h-----------------~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~-~~~l~~~~~~~~~~~i~~~l~~ 108 (262)
T cd05572 47 LEECNH-----------------PFIVKLYRTFKDKKYIYMLMEYCLGGELWTILRD-RGLFDEYTARFYIACVVLAFEY 108 (262)
T ss_pred HHhCCC-----------------CCEeeeeeeEEcCCccEEEEecCCCCcHHHHHhh-cCCCCHHHHHHHHHHHHHHHHH
Confidence 443321 01112222222 4567899999999999876432 12244444444444433 788
Q ss_pred HHhcCccccCCCCCCeEEccCCCCceEEEecccccccCHH
Q 002039 282 IYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSSS 321 (977)
Q Consensus 282 i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~~ 321 (977)
+|..|++|+|+||.||+++.+ +.++|+|||.+..+...
T Consensus 109 lH~~~~~h~dl~~~nilv~~~--~~~~l~df~~~~~~~~~ 146 (262)
T cd05572 109 LHNRGIIYRDLKPENLLLDSN--GYVKLVDFGFAKKLKSG 146 (262)
T ss_pred HhhCCcccCCCCHHHEEEcCC--CCEEEeeCCcccccCcc
Confidence 999999999999999999865 89999999999887654
No 310
>cd06608 STKc_myosinIII_like Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin I
Probab=99.03 E-value=1.2e-09 Score=119.13 Aligned_cols=141 Identities=16% Similarity=0.154 Sum_probs=92.5
Q ss_pred cccccccccEEEEEEec-CCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCcHHHH
Q 002039 124 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (977)
Q Consensus 124 ~piasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea 202 (977)
+++++|++|.||+|+.+ +++.|++|+........ -++.+|.
T Consensus 12 ~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~--------------------------------------~~~~~e~ 53 (275)
T cd06608 12 EVIGEGTYGKVYKARHKKTGQLVAIKIMDIIEDEE--------------------------------------EEIKEEY 53 (275)
T ss_pred eeecCCCCeEEEEEEECCCCcEEEEEEEecCchhH--------------------------------------HHHHHHH
Confidence 68999999999999984 78999999876532210 0233344
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeee-------cCCceEEeeccCCCCCCChHHHHh---cCCCHHHHHH
Q 002039 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-------SSETVLILEFMDGIRLNDCESLEA---FGVNKQKVVE 272 (977)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-------~~~~vLVmE~i~G~~L~~~~~~~~---~~~~~~~l~~ 272 (977)
..+.++.+. ...+.+...+. ....++||||++|.+|.++..... ..++...+..
T Consensus 54 ~~l~~~~~h----------------~~i~~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~ 117 (275)
T cd06608 54 NILRKYSNH----------------PNIATFYGAFIKKNPPGNDDQLWLVMELCGGGSVTDLVKGLRKKGKRLKEEWIAY 117 (275)
T ss_pred HHHHHhcCC----------------CChheEEEEEEecCCCCcceEEEEEEEcCCCCcHHHHHHHHhhcCCCCCHHHHHH
Confidence 444443210 00111212221 122579999999999987754222 2344444444
Q ss_pred HHHHHH--HHHHHhcCccccCCCCCCeEEccCCCCceEEEecccccccCH
Q 002039 273 EITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 320 (977)
Q Consensus 273 ~l~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 320 (977)
.+.+++ +..+|..|++|+|++|.||+++.+ +.++|+|||++..+..
T Consensus 118 ~~~ql~~al~~lH~~~i~H~~l~p~ni~~~~~--~~~~l~d~~~~~~~~~ 165 (275)
T cd06608 118 ILRETLRGLAYLHENKVIHRDIKGQNILLTKN--AEVKLVDFGVSAQLDS 165 (275)
T ss_pred HHHHHHHHHHHHhcCCcccCCCCHHHEEEccC--CeEEECCCccceeccc
Confidence 433333 678899999999999999999865 8899999999877644
No 311
>cd06652 STKc_MEKK2 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 2. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 2 (MEKK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK2 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their re
Probab=99.03 E-value=1e-09 Score=119.53 Aligned_cols=144 Identities=15% Similarity=0.108 Sum_probs=91.4
Q ss_pred cccccccccEEEEEEec-CCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCcHHHH
Q 002039 124 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (977)
Q Consensus 124 ~piasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea 202 (977)
+.|++|++|.||+|+.+ +|+.||||+.+......-. ... + -.+.+|+
T Consensus 8 ~~l~~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~~~~--~~~--------------------~----------~~~~~E~ 55 (265)
T cd06652 8 KLLGQGAFGRVYLCYDADTGRELAVKQVQFDPESPET--SKE--------------------V----------NALECEI 55 (265)
T ss_pred eEEecCCceEEEEEEEcCCCcEEEEEEeecCcCCccc--HHH--------------------H----------HHHHHHH
Confidence 56899999999999974 6999999976532110000 000 0 0234455
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeeec---CCceEEeeccCCCCCCChHHHHhcCCCHHHHHHHHHHHH-
Q 002039 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQS---SETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY- 278 (977)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~~---~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~- 278 (977)
..+.++.+. .-+.+...+.. ...+++|||++|.+|.+.... ....+...+...+.++.
T Consensus 56 ~~l~~l~h~-----------------~i~~~~~~~~~~~~~~~~~v~e~~~~~~L~~~l~~-~~~~~~~~~~~~~~~l~~ 117 (265)
T cd06652 56 QLLKNLLHE-----------------RIVQYYGCLRDPMERTLSIFMEHMPGGSIKDQLKS-YGALTENVTRKYTRQILE 117 (265)
T ss_pred HHHHhcCCC-----------------CeeeEEeEeccCCCceEEEEEEecCCCcHHHHHHH-cCCCCHHHHHHHHHHHHH
Confidence 555555320 01111111111 234689999999999876432 12234444444444333
Q ss_pred -HHHHHhcCccccCCCCCCeEEccCCCCceEEEecccccccC
Q 002039 279 -AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 319 (977)
Q Consensus 279 -l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~ 319 (977)
+..+|..|++|+|++|.||+++.+ +.++|+|||++..+.
T Consensus 118 ~l~~lH~~~i~H~dl~p~nil~~~~--~~~~l~Dfg~~~~~~ 157 (265)
T cd06652 118 GVSYLHSNMIVHRDIKGANILRDSV--GNVKLGDFGASKRLQ 157 (265)
T ss_pred HHHHHHhCCEecCCCCHHHEEecCC--CCEEECcCccccccc
Confidence 778899999999999999999855 899999999987653
No 312
>cd05107 PTKc_PDGFR_beta Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor beta. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) beta; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR beta is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR beta forms homodimers or heterodimers with PDGFR alpha, depending on the nature of the PDGF ligand. PDGF-BB and PDGF-D
Probab=99.03 E-value=1.3e-09 Score=126.44 Aligned_cols=38 Identities=18% Similarity=0.309 Sum_probs=34.3
Q ss_pred HHHHHhcCccccCCCCCCeEEccCCCCceEEEeccccccc
Q 002039 279 AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKL 318 (977)
Q Consensus 279 l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l 318 (977)
+..+|..|++|+|+||.|||++.+ +.++|+|||++..+
T Consensus 252 L~~LH~~~ivHrdlkp~NiLl~~~--~~~kL~DfGla~~~ 289 (401)
T cd05107 252 MEFLASKNCVHRDLAARNVLICEG--KLVKICDFGLARDI 289 (401)
T ss_pred HHHHhcCCcCcccCCcceEEEeCC--CEEEEEecCcceec
Confidence 678999999999999999999865 78999999998765
No 313
>cd05055 PTKc_PDGFR Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to recept
Probab=99.03 E-value=1.2e-09 Score=121.97 Aligned_cols=143 Identities=15% Similarity=0.075 Sum_probs=93.9
Q ss_pred ccccccccccEEEEEEec------CCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhccccc
Q 002039 123 ETPLATASIAQVHRATLV------DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKEL 196 (977)
Q Consensus 123 ~~piasaSigqV~~A~l~------~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~El 196 (977)
.+.||.|++|+||+|+.. ++..||||+.+........ -
T Consensus 40 ~~~ig~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~------------------------------------~ 83 (302)
T cd05055 40 GKTLGAGAFGKVVEATAYGLSKSDAVMKVAVKMLKPTAHSSER------------------------------------E 83 (302)
T ss_pred cceeeccCCeeEEEEEEecCCCCCceeEEEEEecCccCChHHH------------------------------------H
Confidence 368999999999999741 4568999987644321100 0
Q ss_pred CcHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeee-cCCceEEeeccCCCCCCChHHHHhc-CCCHHHHHHHH
Q 002039 197 DFNSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAF-GVNKQKVVEEI 274 (977)
Q Consensus 197 d~~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLVmE~i~G~~L~~~~~~~~~-~~~~~~l~~~l 274 (977)
.+.+|...+.++.+. ..-+.+...+. ....+|||||+.|.+|.++...... .++...+....
T Consensus 84 ~~~~E~~~l~~l~~h----------------~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~i~~~~~~~l~~~~~~~i~ 147 (302)
T cd05055 84 ALMSELKIMSHLGNH----------------ENIVNLLGACTIGGPILVITEYCCYGDLLNFLRRKRESFLTLEDLLSFS 147 (302)
T ss_pred HHHHHHHHHHhccCC----------------CCcceEEEEEecCCceEEEEEcCCCCcHHHHHHhCCCCCCCHHHHHHHH
Confidence 234455555554210 01122222222 4567899999999999876432111 14555555544
Q ss_pred HHHH--HHHHHhcCccccCCCCCCeEEccCCCCceEEEecccccccC
Q 002039 275 TRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 319 (977)
Q Consensus 275 ~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~ 319 (977)
.++. +..+|..|++|+|+||.||+++.+ +.++|+|||++..+.
T Consensus 148 ~~i~~~l~~lH~~~ivH~dlkp~Nil~~~~--~~~~l~dfg~~~~~~ 192 (302)
T cd05055 148 YQVAKGMAFLASKNCIHRDLAARNVLLTHG--KIVKICDFGLARDIM 192 (302)
T ss_pred HHHHHHHHHHHHCCeehhhhccceEEEcCC--CeEEECCCccccccc
Confidence 4443 778899999999999999999855 789999999987664
No 314
>cd06648 STKc_PAK_II Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs foun
Probab=99.03 E-value=1.3e-09 Score=120.57 Aligned_cols=138 Identities=22% Similarity=0.212 Sum_probs=91.7
Q ss_pred cccccccccEEEEEEe-cCCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCcHHHH
Q 002039 124 TPLATASIAQVHRATL-VDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (977)
Q Consensus 124 ~piasaSigqV~~A~l-~~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea 202 (977)
+.||.|++|.||+|+. .+++.|+||+.+-..... +-.+.+|.
T Consensus 25 ~~lg~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~-------------------------------------~~~~~~e~ 67 (285)
T cd06648 25 VKIGEGSTGIVCIATDKSTGRQVAVKKMDLRKQQR-------------------------------------RELLFNEV 67 (285)
T ss_pred eEeccCCCeEEEEEEECCCCCEEEEEEEeccchhH-------------------------------------HHHHHHHH
Confidence 6899999999999996 478999999753111000 00122333
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeee-cCCceEEeeccCCCCCCChHHHHhcCCCHHHHHHHHHHHH--H
Q 002039 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--A 279 (977)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~--l 279 (977)
..+.++.+ ..-+.+...+. ....+++|||++|.+|.+... ....+...+...+.+++ +
T Consensus 68 ~~l~~~~h-----------------~~vv~~~~~~~~~~~~~~v~e~~~~~~L~~~~~--~~~~~~~~~~~~~~ql~~~l 128 (285)
T cd06648 68 VIMRDYQH-----------------PNIVEMYSSYLVGDELWVVMEFLEGGALTDIVT--HTRMNEEQIATVCLAVLKAL 128 (285)
T ss_pred HHHHHcCC-----------------CChheEEEEEEcCCeEEEEEeccCCCCHHHHHH--hCCCCHHHHHHHHHHHHHHH
Confidence 33333211 11122222222 456789999999999987643 33455555555555544 7
Q ss_pred HHHHhcCccccCCCCCCeEEccCCCCceEEEecccccccC
Q 002039 280 HQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 319 (977)
Q Consensus 280 ~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~ 319 (977)
..+|..|++|+|++|.||+++.+ +.++|+|||++..+.
T Consensus 129 ~~lH~~~i~H~dl~p~Nil~~~~--~~~~l~d~g~~~~~~ 166 (285)
T cd06648 129 SFLHAQGVIHRDIKSDSILLTSD--GRVKLSDFGFCAQVS 166 (285)
T ss_pred HHHHhCCeecCCCChhhEEEcCC--CcEEEcccccchhhc
Confidence 88999999999999999999865 899999999876554
No 315
>cd05051 PTKc_DDR Catalytic domain of the Protein Tyrosine Kinases, Discoidin Domain Receptors. Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR) subfamily; catalytic (c) domain. The DDR subfamily consists of homologs of mammalian DDR1, DDR2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR subfamily members are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linke
Probab=99.03 E-value=1.7e-09 Score=119.78 Aligned_cols=79 Identities=20% Similarity=0.256 Sum_probs=60.0
Q ss_pred cCCceEEeeccCCCCCCChHHHHh----------cCCCHHHHHHHHHHHH--HHHHHhcCccccCCCCCCeEEccCCCCc
Q 002039 239 SSETVLILEFMDGIRLNDCESLEA----------FGVNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHR 306 (977)
Q Consensus 239 ~~~~vLVmE~i~G~~L~~~~~~~~----------~~~~~~~l~~~l~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~ 306 (977)
....+++|||++|.+|.++..... ..++...+...+.++. +..+|..|++|+|+||.||+++.+ +.
T Consensus 91 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~LH~~~i~H~dlkp~Nili~~~--~~ 168 (296)
T cd05051 91 DPPLCMIMEYMENGDLNQFLQKHVAETSGLACNSKSLSFSTLLYMATQIASGMRYLESLNFVHRDLATRNCLVGKN--YT 168 (296)
T ss_pred CCCcEEEEecCCCCCHHHHHHhcccccccccccCCCCCHHHHHHHHHHHHHHHHHHHHcCccccccchhceeecCC--Cc
Confidence 456789999999998887643211 1245555555555544 778899999999999999999865 89
Q ss_pred eEEEecccccccC
Q 002039 307 PILLDFGLTKKLS 319 (977)
Q Consensus 307 i~LiDFG~~~~l~ 319 (977)
++|+|||++..+.
T Consensus 169 ~~l~dfg~~~~~~ 181 (296)
T cd05051 169 IKIADFGMSRNLY 181 (296)
T ss_pred eEEccccceeecc
Confidence 9999999987653
No 316
>cd05089 PTKc_Tie1 Catalytic domain of the Protein Tyrosine Kinase, Tie1. Protein Tyrosine Kinase (PTK) family; Tie1; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie1 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. No specific ligand has been identified for Tie1, although the angiopoietin, Ang-1, binds to Tie1 through integrins at high concentrations.
Probab=99.03 E-value=1.2e-09 Score=121.44 Aligned_cols=140 Identities=17% Similarity=0.167 Sum_probs=88.8
Q ss_pred cccccccccEEEEEEec-CCC--EEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCcHH
Q 002039 124 TPLATASIAQVHRATLV-DGR--QVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNS 200 (977)
Q Consensus 124 ~piasaSigqV~~A~l~-~G~--~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~ 200 (977)
+.||.|++|+||+|+++ +|. .|++|+.+........ -+|.+
T Consensus 8 ~~lg~g~~g~v~~~~~~~~~~~~~~~ik~~~~~~~~~~~------------------------------------~~~~~ 51 (297)
T cd05089 8 DVIGEGNFGQVIRAMIKKDGLKMNAAIKMLKEFASENDH------------------------------------RDFAG 51 (297)
T ss_pred eeecCCCcceEEEEEecCCCCcceeEEEEccccCCHHHH------------------------------------HHHHH
Confidence 57999999999999975 444 4788865532111100 02445
Q ss_pred HHHHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeee-cCCceEEeeccCCCCCCChHHHHh---------------cC
Q 002039 201 EAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLEA---------------FG 264 (977)
Q Consensus 201 Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLVmE~i~G~~L~~~~~~~~---------------~~ 264 (977)
|...+.++.+. ..-+.+..... ....++||||+++.+|.++..... ..
T Consensus 52 E~~~l~~l~~h----------------p~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~ 115 (297)
T cd05089 52 ELEVLCKLGHH----------------PNIINLLGACENRGYLYIAIEYAPYGNLLDFLRKSRVLETDPAFAKEHGTAST 115 (297)
T ss_pred HHHHHHhhcCC----------------CchhheEEEEccCCcceEEEEecCCCcHHHHHHhccccccccccccccCccCC
Confidence 55555554210 00111212222 355689999999999877643211 01
Q ss_pred CCHHHHHHHHHHHH--HHHHHhcCccccCCCCCCeEEccCCCCceEEEecccccc
Q 002039 265 VNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKK 317 (977)
Q Consensus 265 ~~~~~l~~~l~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~ 317 (977)
+....+...+.++. +..+|..|++|+|+||.|||++.+ +.++|+|||++..
T Consensus 116 l~~~~~~~i~~qi~~al~~lH~~~ivH~dlkp~Nill~~~--~~~kl~dfg~~~~ 168 (297)
T cd05089 116 LTSQQLLQFASDVATGMQYLSEKQFIHRDLAARNVLVGEN--LASKIADFGLSRG 168 (297)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHCCcccCcCCcceEEECCC--CeEEECCcCCCcc
Confidence 33344444444443 788999999999999999999865 8899999998764
No 317
>cd08221 STKc_Nek9 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associa
Probab=99.03 E-value=1.1e-09 Score=118.55 Aligned_cols=142 Identities=17% Similarity=0.114 Sum_probs=94.0
Q ss_pred cccccccccEEEEEEe-cCCCEEEEEEecCC-hhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCcHHH
Q 002039 124 TPLATASIAQVHRATL-VDGRQVVVKVQHQG-IKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSE 201 (977)
Q Consensus 124 ~piasaSigqV~~A~l-~~G~~VAVKv~~p~-i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~E 201 (977)
+.||.|++|+|+.++. .+|+.|++|..... .... ..-++.+|
T Consensus 6 ~~ig~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~------------------------------------~~~~~~~e 49 (256)
T cd08221 6 RVLGKGAFGEATLYRRTEDDSLVVWKEVNLTRLSEK------------------------------------ERRDALNE 49 (256)
T ss_pred eEecccCCceEEEEEEcCCCcEEEEEEEeecccchh------------------------------------HHHHHHHH
Confidence 5799999999999986 47999999975321 1100 00023455
Q ss_pred HHHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeee-cCCceEEeeccCCCCCCChHHHH-hcCCCHHHHHHHHHHHH-
Q 002039 202 AENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLE-AFGVNKQKVVEEITRAY- 278 (977)
Q Consensus 202 a~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLVmE~i~G~~L~~~~~~~-~~~~~~~~l~~~l~~~~- 278 (977)
...+.++.+ ...+.+...+. ....+++|||++|.+|.+..... ....+...+...+.+++
T Consensus 50 ~~~l~~~~h-----------------~~i~~~~~~~~~~~~~~~~~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~ 112 (256)
T cd08221 50 IVILSLLQH-----------------PNIIAYYNHFMDDNTLLIEMEYANGGTLYDKIVRQKGQLFEEEMVLWYLFQIVS 112 (256)
T ss_pred HHHHHhCCC-----------------CCeeEEEeEEecCCeEEEEEEecCCCcHHHHHHhccccCCCHHHHHHHHHHHHH
Confidence 555544421 11122323332 45568999999999998764422 12344555555444433
Q ss_pred -HHHHHhcCccccCCCCCCeEEccCCCCceEEEecccccccCH
Q 002039 279 -AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 320 (977)
Q Consensus 279 -l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 320 (977)
+..+|..|++|+|++|.||+++.+ +.++|+|||.+..+..
T Consensus 113 ~l~~lh~~~i~h~dl~p~ni~~~~~--~~~kl~d~~~~~~~~~ 153 (256)
T cd08221 113 AVSYIHKAGILHRDIKTLNIFLTKA--GLIKLGDFGISKILGS 153 (256)
T ss_pred HHHHHHhCCccccCCChHhEEEeCC--CCEEECcCcceEEccc
Confidence 678899999999999999999865 8899999999876644
No 318
>cd07833 STKc_CDKL Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning
Probab=99.02 E-value=7.4e-10 Score=121.96 Aligned_cols=143 Identities=19% Similarity=0.189 Sum_probs=93.6
Q ss_pred cccccccccEEEEEEec-CCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCcHHHH
Q 002039 124 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (977)
Q Consensus 124 ~piasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea 202 (977)
+.||.|++|.||+|+.+ +++.||||+.+...... + ..-.+.+|.
T Consensus 7 ~~i~~g~~~~v~~~~~~~~~~~v~vK~~~~~~~~~-----------------------------~------~~~~~~~e~ 51 (288)
T cd07833 7 GVVGEGAYGVVLKCRNKATGEIVAIKKFKESEDDE-----------------------------D------VKKTALREV 51 (288)
T ss_pred EEecccCCeeEEEEEeCCCCcEEEEehhhhhcccc-----------------------------c------chhHHHHHH
Confidence 56899999999999985 68999999765422100 0 001233444
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeee-cCCceEEeeccCCCCCCChHHHHhcCCCHHHHHHHHHHHH--H
Q 002039 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--A 279 (977)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~--l 279 (977)
+.+.++.+ ...+.+..++. ....++||||++|..+..+.. .....+...+...+.+++ +
T Consensus 52 ~~l~~l~~-----------------~~i~~~~~~~~~~~~~~iv~e~~~~~~l~~~~~-~~~~~~~~~~~~~~~~i~~~l 113 (288)
T cd07833 52 KVLRQLRH-----------------ENIVNLKEAFRRKGRLYLVFEYVERTLLELLEA-SPGGLPPDAVRSYIWQLLQAI 113 (288)
T ss_pred HHHHhcCC-----------------CCeeehhheEEECCEEEEEEecCCCCHHHHHHh-cCCCCCHHHHHHHHHHHHHHH
Confidence 44444431 01122222222 355789999999866654321 223355555555544444 7
Q ss_pred HHHHhcCccccCCCCCCeEEccCCCCceEEEecccccccCHH
Q 002039 280 HQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSSS 321 (977)
Q Consensus 280 ~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~~ 321 (977)
..+|..|++|+|++|.||+++.+ +.++|+|||++..+...
T Consensus 114 ~~LH~~~i~H~dl~~~ni~~~~~--~~~kl~d~g~~~~~~~~ 153 (288)
T cd07833 114 AYCHSHNIIHRDIKPENILVSES--GVLKLCDFGFARALRAR 153 (288)
T ss_pred HHHHHCCeecCCCCHHHeEECCC--CCEEEEeeecccccCCC
Confidence 78899999999999999999865 89999999998877553
No 319
>cd07843 STKc_CDC2L1 Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1. Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the
Probab=99.02 E-value=9.9e-10 Score=121.63 Aligned_cols=142 Identities=15% Similarity=0.141 Sum_probs=94.9
Q ss_pred cccccccccEEEEEEec-CCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCcHHHH
Q 002039 124 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (977)
Q Consensus 124 ~piasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea 202 (977)
+.||.|++|.||+|+.+ +|+.|+||..+...... . .+..+.+|.
T Consensus 11 ~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~---~--------------------------------~~~~~~~e~ 55 (293)
T cd07843 11 NRIEEGTYGVVYRARDKKTGEIVALKKLKMEKEKE---G--------------------------------FPITSLREI 55 (293)
T ss_pred hhhcCCCCeEEEEEEECCCCcEEEEEEEeeccccc---c--------------------------------chhhHHHHH
Confidence 67999999999999985 68999999765322110 0 011233455
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeee-c--CCceEEeeccCCCCCCChHHHHhcCCCHHHHHHHHHHHH-
Q 002039 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-S--SETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY- 278 (977)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~--~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~- 278 (977)
..+.++++ ..-+.+..... . ...+|||||+++ +|.++.......++...+...+.+++
T Consensus 56 ~~l~~l~h-----------------~ni~~~~~~~~~~~~~~~~lv~e~~~~-~L~~~~~~~~~~l~~~~~~~i~~qi~~ 117 (293)
T cd07843 56 NILLKLQH-----------------PNIVTVKEVVVGSNLDKIYMVMEYVEH-DLKSLMETMKQPFLQSEVKCLMLQLLS 117 (293)
T ss_pred HHHHhcCC-----------------CCEEEEEEEEEecCCCcEEEEehhcCc-CHHHHHHhccCCCCHHHHHHHHHHHHH
Confidence 55544432 01122222222 3 567999999986 66655332223356666666555554
Q ss_pred -HHHHHhcCccccCCCCCCeEEccCCCCceEEEecccccccCH
Q 002039 279 -AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 320 (977)
Q Consensus 279 -l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 320 (977)
+..+|..|++|+|++|.||+++.+ +.++|+|||++..+..
T Consensus 118 aL~~LH~~~i~H~dl~p~nili~~~--~~~~l~d~g~~~~~~~ 158 (293)
T cd07843 118 GVAHLHDNWILHRDLKTSNLLLNNR--GILKICDFGLAREYGS 158 (293)
T ss_pred HHHHHHHCCeeeccCCHHHEEECCC--CcEEEeecCceeeccC
Confidence 788999999999999999999865 8999999999887654
No 320
>cd05047 PTKc_Tie Catalytic domain of Tie Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Tie subfamily; catalytic (c) domain. The Tie subfamily consists of Tie1 and Tie2. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie proteins are receptor tyr kinases (RTKs) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2, while no specific l
Probab=99.02 E-value=2.3e-09 Score=117.35 Aligned_cols=138 Identities=17% Similarity=0.177 Sum_probs=88.5
Q ss_pred ccccccccEEEEEEec-CCC--EEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCcHHH
Q 002039 125 PLATASIAQVHRATLV-DGR--QVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSE 201 (977)
Q Consensus 125 piasaSigqV~~A~l~-~G~--~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~E 201 (977)
.||.|++|.||+|+++ +|+ .|++|..+........ -++.+|
T Consensus 2 ~lg~g~~g~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~------------------------------------~~~~~E 45 (270)
T cd05047 2 VIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDH------------------------------------RDFAGE 45 (270)
T ss_pred cCCCCCCceEEEEEEcCCCCeeEEEEEEccccCCHHHH------------------------------------HHHHHH
Confidence 5899999999999985 455 4677866532211100 023445
Q ss_pred HHHHHHHHHHhCCCCCCCCCCCCCCCCCC-eEeceeee-cCCceEEeeccCCCCCCChHHHHh---------------cC
Q 002039 202 AENTRIVSANLGCKNKHEDSNKKPAYEVD-VLIPEVIQ-SSETVLILEFMDGIRLNDCESLEA---------------FG 264 (977)
Q Consensus 202 a~n~~~~~~~~~~~~~~~~~~~~~~~~~~-v~vP~v~~-~~~~vLVmE~i~G~~L~~~~~~~~---------------~~ 264 (977)
...+.++.+ ++. +.+-..+. ....++||||++|.+|.++..... ..
T Consensus 46 ~~~l~~l~~-----------------h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~ 108 (270)
T cd05047 46 LEVLCKLGH-----------------HPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTAST 108 (270)
T ss_pred HHHHHhhcc-----------------CCCeeeEEEEEecCCCceEEEEeCCCCcHHHHHHhccccccccccccccCCcCC
Confidence 555555432 111 12222222 455789999999999877643211 11
Q ss_pred CCHHHHHHHHHHHH--HHHHHhcCccccCCCCCCeEEccCCCCceEEEecccccc
Q 002039 265 VNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKK 317 (977)
Q Consensus 265 ~~~~~l~~~l~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~ 317 (977)
+....+...+.++. +..+|..|++|+|++|.||+++.+ +.++|+|||++..
T Consensus 109 l~~~~~~~~~~~i~~al~~lH~~~i~H~dikp~nili~~~--~~~kl~dfgl~~~ 161 (270)
T cd05047 109 LSSQQLLHFAADVARGMDYLSQKQFIHRDLAARNILVGEN--YVAKIADFGLSRG 161 (270)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHCCEeecccccceEEEcCC--CeEEECCCCCccc
Confidence 33444444444443 788999999999999999999865 8899999998753
No 321
>cd05093 PTKc_TrkB Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly
Probab=99.02 E-value=1.4e-09 Score=120.30 Aligned_cols=79 Identities=15% Similarity=0.237 Sum_probs=59.6
Q ss_pred cCCceEEeeccCCCCCCChHHHHh------------cCCCHHHHHHHHHHHH--HHHHHhcCccccCCCCCCeEEccCCC
Q 002039 239 SSETVLILEFMDGIRLNDCESLEA------------FGVNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPP 304 (977)
Q Consensus 239 ~~~~vLVmE~i~G~~L~~~~~~~~------------~~~~~~~l~~~l~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~ 304 (977)
....++||||++|.+|.++..... ..++...+...+.++. +..+|..|++|+|++|.||+++.+
T Consensus 79 ~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ql~~aL~~lH~~~i~H~dlkp~Nili~~~-- 156 (288)
T cd05093 79 GDPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNRPAELTQSQMLHIAQQIAAGMVYLASQHFVHRDLATRNCLVGEN-- 156 (288)
T ss_pred CCccEEEEEcCCCCCHHHHHHHcCCccccccccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeecccCcceEEEccC--
Confidence 466789999999999877643111 1244455555555444 778999999999999999999865
Q ss_pred CceEEEecccccccC
Q 002039 305 HRPILLDFGLTKKLS 319 (977)
Q Consensus 305 g~i~LiDFG~~~~l~ 319 (977)
+.++|+|||++..+.
T Consensus 157 ~~~kl~dfg~~~~~~ 171 (288)
T cd05093 157 LLVKIGDFGMSRDVY 171 (288)
T ss_pred CcEEeccCCcccccc
Confidence 899999999987653
No 322
>cd06609 STKc_MST3_like Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN)
Probab=99.02 E-value=1.2e-09 Score=119.57 Aligned_cols=141 Identities=17% Similarity=0.177 Sum_probs=94.5
Q ss_pred cccccccccEEEEEEec-CCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCcHHHH
Q 002039 124 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (977)
Q Consensus 124 ~piasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea 202 (977)
+.||+|++|.||+|+.. +|+.||||+....... .+. -++.+|.
T Consensus 7 ~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~---~~~---------------------------------~~~~~e~ 50 (274)
T cd06609 7 ECIGKGSFGEVYKAIDKRTNQVVAIKVIDLEEAE---DEI---------------------------------EDIQQEI 50 (274)
T ss_pred hhhcCCCCeEEEEEEECCCCeEEEEEEeeccccc---hHH---------------------------------HHHHHHH
Confidence 56899999999999975 7899999986422100 000 0123444
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeee-cCCceEEeeccCCCCCCChHHHHhcCCCHHHHHHHHHHHH--H
Q 002039 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--A 279 (977)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~--l 279 (977)
+.+..+.+ ..-+.+-..+. ....++||||++|.+|.+... ....+...+...+.+++ +
T Consensus 51 ~~l~~l~h-----------------~~i~~~~~~~~~~~~~~~v~e~~~~~~L~~~~~--~~~~~~~~~~~~~~ql~~~l 111 (274)
T cd06609 51 QFLSQCRS-----------------PYITKYYGSFLKGSKLWIIMEYCGGGSCLDLLK--PGKLDETYIAFILREVLLGL 111 (274)
T ss_pred HHHHHcCC-----------------CCeeeeeEEEEECCeEEEEEEeeCCCcHHHHHh--hcCCCHHHHHHHHHHHHHHH
Confidence 44443321 00111112222 456789999999999987643 33455555555555544 6
Q ss_pred HHHHhcCccccCCCCCCeEEccCCCCceEEEecccccccCHH
Q 002039 280 HQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSSS 321 (977)
Q Consensus 280 ~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~~ 321 (977)
..+|..|++|+|++|.||+++.+ +.++|+|||++..+...
T Consensus 112 ~~lh~~~i~h~dl~p~ni~i~~~--~~~~l~d~g~~~~~~~~ 151 (274)
T cd06609 112 EYLHEEGKIHRDIKAANILLSEE--GDVKLADFGVSGQLTST 151 (274)
T ss_pred HHHHhCCcccCCCCHHHEEECCC--CCEEEcccccceeeccc
Confidence 67899999999999999999965 89999999999887653
No 323
>cd06653 STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain, functionally uncharacterized subgroup 1. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MEKK3-like subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phospho
Probab=99.02 E-value=1.2e-09 Score=119.17 Aligned_cols=144 Identities=14% Similarity=0.103 Sum_probs=91.7
Q ss_pred cccccccccEEEEEEe-cCCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCcHHHH
Q 002039 124 TPLATASIAQVHRATL-VDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (977)
Q Consensus 124 ~piasaSigqV~~A~l-~~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea 202 (977)
+.||.|++|.||+|+. .+|+.||+|+.......... - . ..-.+.+|+
T Consensus 8 ~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~--~-----------------------~-------~~~~~~~ei 55 (264)
T cd06653 8 KLLGRGAFGEVYLCYDADTGRELAVKQVPFDPDSQET--S-----------------------K-------EVNALECEI 55 (264)
T ss_pred eeEccCCCeEEEEEEEcCCCCEEEEEEEecCcccchh--h-----------------------H-------HHHHHHHHH
Confidence 6799999999999997 47999999986432211000 0 0 001244555
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeee---cCCceEEeeccCCCCCCChHHHHhcCCCHHHHHHHHHHHH-
Q 002039 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ---SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY- 278 (977)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~---~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~- 278 (977)
..+.++++ ..-+.+...+. ....+++|||++|.+|.+.... ....+...+...+.++.
T Consensus 56 ~~l~~l~h-----------------~~i~~~~~~~~~~~~~~~~~v~e~~~~~~L~~~~~~-~~~l~~~~~~~~~~~i~~ 117 (264)
T cd06653 56 QLLKNLRH-----------------DRIVQYYGCLRDPEEKKLSIFVEYMPGGSIKDQLKA-YGALTENVTRRYTRQILQ 117 (264)
T ss_pred HHHHHcCC-----------------CCcceEEEEEEcCCCCEEEEEEEeCCCCcHHHHHHH-cCCCCHHHHHHHHHHHHH
Confidence 55555432 01112222222 2335789999999998776432 12234444433333333
Q ss_pred -HHHHHhcCccccCCCCCCeEEccCCCCceEEEecccccccC
Q 002039 279 -AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 319 (977)
Q Consensus 279 -l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~ 319 (977)
+..+|..|++|+|++|+||+++.+ +.++|+|||.+..+.
T Consensus 118 al~~LH~~~i~H~dl~p~ni~i~~~--~~~~l~dfg~~~~~~ 157 (264)
T cd06653 118 GVSYLHSNMIVHRDIKGANILRDSA--GNVKLGDFGASKRIQ 157 (264)
T ss_pred HHHHHHhCCEecCCCCHHHEEEcCC--CCEEECccccccccc
Confidence 678899999999999999999855 889999999988763
No 324
>cd07877 STKc_p38alpha_MAPK14 Catalytic domain of the Serine/Threonine Kinase, p38alpha Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38alpha subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38alpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38alpha, also called MAPK14
Probab=99.02 E-value=9.5e-10 Score=125.20 Aligned_cols=139 Identities=21% Similarity=0.258 Sum_probs=88.7
Q ss_pred cccccccccEEEEEEe-cCCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCcHHHH
Q 002039 124 TPLATASIAQVHRATL-VDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (977)
Q Consensus 124 ~piasaSigqV~~A~l-~~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea 202 (977)
++||+|++|.||+|.. ++|+.||||+.......... +-.+.+|.
T Consensus 23 ~~lg~G~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~-----------------------------------~~~~~~Ei 67 (345)
T cd07877 23 SPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIH-----------------------------------AKRTYREL 67 (345)
T ss_pred EEeeecCCeEEEEEEEcCCCeEEEEEEecCcchhhHH-----------------------------------HHHHHHHH
Confidence 6899999999999986 58999999987643211100 00123344
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeee-------cCCceEEeeccCCCCCCChHHHHhcCCCHHHHHHHHH
Q 002039 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-------SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEIT 275 (977)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-------~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~ 275 (977)
..+.++++. .-+.+..++. ....+++++++ |.+|.++. ....++...+...+.
T Consensus 68 ~~l~~l~h~-----------------~iv~~~~~~~~~~~~~~~~~~~lv~~~~-~~~L~~~~--~~~~l~~~~~~~i~~ 127 (345)
T cd07877 68 RLLKHMKHE-----------------NVIGLLDVFTPARSLEEFNDVYLVTHLM-GADLNNIV--KCQKLTDDHVQFLIY 127 (345)
T ss_pred HHHHHcCCC-----------------cccceeeeeeecccccccccEEEEehhc-ccCHHHHH--hcCCCCHHHHHHHHH
Confidence 444444321 0111222221 12357888887 66665542 223345444444444
Q ss_pred HHH--HHHHHhcCccccCCCCCCeEEccCCCCceEEEecccccccC
Q 002039 276 RAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 319 (977)
Q Consensus 276 ~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~ 319 (977)
+++ +..+|..|++|+|+||.||+++.+ +.++|+|||++....
T Consensus 128 qi~~aL~~LH~~~ivH~dlkp~NIll~~~--~~~kl~dfg~~~~~~ 171 (345)
T cd07877 128 QILRGLKYIHSADIIHRDLKPSNLAVNED--CELKILDFGLARHTD 171 (345)
T ss_pred HHHHHHHHHHHCCeeecCCChHHEEEcCC--CCEEEeccccccccc
Confidence 433 778999999999999999999865 899999999987653
No 325
>cd07840 STKc_CDK9_like Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA po
Probab=99.01 E-value=8.5e-10 Score=121.20 Aligned_cols=143 Identities=16% Similarity=0.196 Sum_probs=93.2
Q ss_pred cccccccccEEEEEEec-CCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCcHHHH
Q 002039 124 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (977)
Q Consensus 124 ~piasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea 202 (977)
+.||+|++|.||+|+.. +|+.||||+.+......- ...++.+|.
T Consensus 5 ~~l~~g~~~~vy~~~~~~~~~~~~~K~~~~~~~~~~-----------------------------------~~~~~~~e~ 49 (287)
T cd07840 5 AQIGEGTYGQVYKARNKKTGELVALKKIRMENEKEG-----------------------------------FPITAIREI 49 (287)
T ss_pred EEeccCCCeEEEEEEECCCCeEEEEEEEeccccccc-----------------------------------chHHHHHHH
Confidence 46899999999999975 689999998875431000 001234455
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeee-c--CCceEEeeccCCCCCCChHHHHhcCCCHHHHHHHHHHHH-
Q 002039 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-S--SETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY- 278 (977)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~--~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~- 278 (977)
..+.++.+ ..-+.+-.++. . ...++||||+++ +|.++.......++...+...+.++.
T Consensus 50 ~~l~~l~~-----------------~~i~~~~~~~~~~~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~i~~~i~~ 111 (287)
T cd07840 50 KLLQKLRH-----------------PNIVRLKEIVTSKGKGSIYMVFEYMDH-DLTGLLDSPEVKFTESQIKCYMKQLLE 111 (287)
T ss_pred HHHHhccC-----------------CCeeeheeeEecCCCCcEEEEeccccc-cHHHHHhccCCCCCHHHHHHHHHHHHH
Confidence 55544432 00122222222 2 567899999986 55544321112455555544444443
Q ss_pred -HHHHHhcCccccCCCCCCeEEccCCCCceEEEecccccccCHH
Q 002039 279 -AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSSS 321 (977)
Q Consensus 279 -l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~~ 321 (977)
+..+|..|++|+|++|.||+++++ +.++|+|||++..+...
T Consensus 112 al~~LH~~~~~h~dl~p~nil~~~~--~~~~l~d~g~~~~~~~~ 153 (287)
T cd07840 112 GLQYLHSNGILHRDIKGSNILINND--GVLKLADFGLARPYTKR 153 (287)
T ss_pred HHHHHHHCCceeccCcHHHeEEcCC--CCEEEccccceeeccCC
Confidence 778999999999999999999965 89999999998877543
No 326
>PF07714 Pkinase_Tyr: Protein tyrosine kinase Protein kinase; unclassified specificity. Tyrosine kinase, catalytic domain; InterPro: IPR001245 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Tyrosine-protein kinases can transfer a phosphate group from ATP to a tyrosine residue in a protein. These enzymes can be divided into two main groups []: Receptor tyrosine kinases (RTK), which are transmembrane proteins involved in signal transduction; they play key roles in growth, differentiation, metabolism, adhesion, motility, death and oncogenesis []. RTKs are composed of 3 domains: an extracellular domain (binds ligand), a transmembrane (TM) domain, and an intracellular catalytic domain (phosphorylates substrate). The TM domain plays an important role in the dimerisation process necessary for signal transduction []. Cytoplasmic / non-receptor tyrosine kinases, which act as regulatory proteins, playing key roles in cell differentiation, motility, proliferation, and survival. For example, the Src-family of protein-tyrosine kinases []. ; GO: 0004672 protein kinase activity, 0006468 protein phosphorylation; PDB: 2HYY_C 1OPL_A 2V7A_A 2G2H_B 2G1T_A 3PYY_A 3CS9_D 2HZI_A 2E2B_A 2HIW_A ....
Probab=99.01 E-value=7.2e-10 Score=120.75 Aligned_cols=140 Identities=19% Similarity=0.248 Sum_probs=95.7
Q ss_pred cccccccccEEEEEEec-----CCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCc
Q 002039 124 TPLATASIAQVHRATLV-----DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDF 198 (977)
Q Consensus 124 ~piasaSigqV~~A~l~-----~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~ 198 (977)
+-||.|++|.||+|+++ .+..|+||+..+...... ..+|
T Consensus 5 ~~ig~G~fg~v~~~~~~~~~~~~~~~V~vk~~~~~~~~~~------------------------------------~~~~ 48 (259)
T PF07714_consen 5 KQIGEGSFGKVYRAEWKQKDNDKNQPVAVKILKPSSSEEE------------------------------------EEEF 48 (259)
T ss_dssp EEEEEESSEEEEEEEEESTTTSSEEEEEEEEESTTSSHHH------------------------------------HHHH
T ss_pred eEEccCCCcEEEEEEEEcccCCCCEEEEEEEecccccccc------------------------------------ceee
Confidence 45899999999999986 367899999865332110 1134
Q ss_pred HHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeee-cCCceEEeeccCCCCCCChHHHH-hcCCCHHHHHHHHHH
Q 002039 199 NSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLE-AFGVNKQKVVEEITR 276 (977)
Q Consensus 199 ~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLVmE~i~G~~L~~~~~~~-~~~~~~~~l~~~l~~ 276 (977)
.+|++.+.++++ ..-+.+-.+.. .....+||||+++.+|.+..... ...++...+...+.+
T Consensus 49 ~~e~~~l~~l~h-----------------~ni~~~~g~~~~~~~~~lv~e~~~~g~L~~~L~~~~~~~~~~~~~~~i~~~ 111 (259)
T PF07714_consen 49 LNEIQILRKLRH-----------------PNIVKLYGFCIENEPLFLVMEYCPGGSLDDYLKSKNKEPLSEQQRLSIAIQ 111 (259)
T ss_dssp HHHHHHHHTHSB-----------------TTBE-EEEEEESSSSEEEEEE--TTEBHHHHHHHTCTTTSBHHHHHHHHHH
T ss_pred eecccccccccc-----------------ccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 456665555522 11122222222 45568999999999998875433 235666666666666
Q ss_pred HH--HHHHHhcCccccCCCCCCeEEccCCCCceEEEeccccccc
Q 002039 277 AY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKL 318 (977)
Q Consensus 277 ~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l 318 (977)
+. +..+|..+++|+|++|.||+++.+ +.++|.|||+....
T Consensus 112 i~~~l~~Lh~~~iiH~~l~~~nill~~~--~~~Kl~~f~~~~~~ 153 (259)
T PF07714_consen 112 IAEALSYLHSNNIIHGNLSPSNILLDSN--GQVKLSDFGLSRPI 153 (259)
T ss_dssp HHHHHHHHHHTTEEEST-SGGGEEEETT--TEEEEESTTTGEET
T ss_pred cccccccccccccccccccccccccccc--cccccccccccccc
Confidence 55 788999999999999999999965 89999999998877
No 327
>cd07864 STKc_CDK12 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 12 (CDK12) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 is widely
Probab=99.01 E-value=7.7e-10 Score=122.90 Aligned_cols=142 Identities=18% Similarity=0.173 Sum_probs=90.1
Q ss_pred cccccccccEEEEEEec-CCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCcHHHH
Q 002039 124 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (977)
Q Consensus 124 ~piasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea 202 (977)
+.+|.|++|+||+|+.+ +|+.||||+.+......- .+.++.+|.
T Consensus 13 ~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~-----------------------------------~~~~~~~e~ 57 (302)
T cd07864 13 GQIGEGTYGQVYKARDKDTGELVALKKVRLDNEKEG-----------------------------------FPITAIREI 57 (302)
T ss_pred eeecccCCEEEEEEEECCCCcEEEEEEEeecccccC-----------------------------------chHHHHHHH
Confidence 57999999999999985 689999998764321100 011233344
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeee-----------cCCceEEeeccCCCCCCChHHHHhcCCCHHHHH
Q 002039 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-----------SSETVLILEFMDGIRLNDCESLEAFGVNKQKVV 271 (977)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-----------~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~ 271 (977)
+.+.++++- ..+.+..++. ....+|||||++| .+.+........++...+.
T Consensus 58 ~~~~~l~h~-----------------~i~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~-~l~~~l~~~~~~~~~~~~~ 119 (302)
T cd07864 58 KILRQLNHR-----------------NIVNLKEIVTDKQDALDFKKDKGAFYLVFEYMDH-DLMGLLESGLVHFSEDHIK 119 (302)
T ss_pred HHHHhCCCC-----------------CeeeeeheecCcchhhhccccCCcEEEEEcccCc-cHHHHHhcCCCCCCHHHHH
Confidence 444433210 0111111111 1246799999987 3333221111235555555
Q ss_pred HHHHHHH--HHHHHhcCccccCCCCCCeEEccCCCCceEEEecccccccCH
Q 002039 272 EEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 320 (977)
Q Consensus 272 ~~l~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 320 (977)
..+.+++ +..+|..|++|+|+||+||+++.+ +.++|+|||.+..+..
T Consensus 120 ~i~~qi~~aL~~LH~~~i~H~dl~p~nili~~~--~~~kl~dfg~~~~~~~ 168 (302)
T cd07864 120 SFMKQLLEGLNYCHKKNFLHRDIKCSNILLNNK--GQIKLADFGLARLYNS 168 (302)
T ss_pred HHHHHHHHHHHHHHhCCeecCCCCHHHEEECCC--CcEEeCcccccccccC
Confidence 5555544 778999999999999999999865 8999999999887654
No 328
>cd05086 PTKc_Aatyk2 Catalytic domain of the Protein Tyrosine Kinase, Apoptosis-associated tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 2 (Aatyk2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk2 is a member of the Aatyk subfamily of proteins, which are receptor kinases containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk2 is also called lemur tyrosine kinase 2 (Lmtk2) or brain-enriched kinase (Brek). It is expressed at high levels in early postnatal brain, and has been shown to play a role in nerve growth factor (NGF) signaling. Studies with knockout mice reveal that Aatyk2 is essential for late stage
Probab=99.01 E-value=9.3e-10 Score=120.34 Aligned_cols=76 Identities=14% Similarity=0.169 Sum_probs=54.3
Q ss_pred CCceEEeeccCCCCCCChHHHHhc---CCCHHHHHHHHHHHH--HHHHHhcCccccCCCCCCeEEccCCCCceEEEeccc
Q 002039 240 SETVLILEFMDGIRLNDCESLEAF---GVNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGL 314 (977)
Q Consensus 240 ~~~vLVmE~i~G~~L~~~~~~~~~---~~~~~~l~~~l~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~ 314 (977)
...++||||++|.+|.++...... ......+...+.++. +..+|..|++|+|+||.|||++.+ +.++|+|||+
T Consensus 68 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~i~H~dikp~nil~~~~--~~~~l~Dfg~ 145 (268)
T cd05086 68 IPYLLVFEYCELGDLKSYLSQEQWHRRNSQLLLLQRMACEIAAGVTHMHKHNFLHSDLALRNCFLTSD--LTVKVGDYGI 145 (268)
T ss_pred CccEEEEecCCCCcHHHHHHhhhcccccccHHHHHHHHHHHHHHHHHHHHCCeeccCCccceEEEcCC--ccEEeccccc
Confidence 456899999999999876432211 112222223333332 678899999999999999999865 8899999998
Q ss_pred ccc
Q 002039 315 TKK 317 (977)
Q Consensus 315 ~~~ 317 (977)
+..
T Consensus 146 ~~~ 148 (268)
T cd05086 146 GPS 148 (268)
T ss_pred ccc
Confidence 754
No 329
>cd07846 STKc_CDKL2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKI
Probab=99.01 E-value=8e-10 Score=121.66 Aligned_cols=78 Identities=26% Similarity=0.387 Sum_probs=59.6
Q ss_pred CCceEEeeccCCCCCCChHHHHhcCCCHHHHHHHHHHHH--HHHHHhcCccccCCCCCCeEEccCCCCceEEEecccccc
Q 002039 240 SETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKK 317 (977)
Q Consensus 240 ~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~ 317 (977)
...++||||++|..+.++.. ....++...+...+.++. +..+|..|++|+|++|.||+++++ +.++|+|||++..
T Consensus 73 ~~~~lv~e~~~~~~l~~~~~-~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~h~~l~p~ni~~~~~--~~~~l~dfg~~~~ 149 (286)
T cd07846 73 KRLYLVFEFVDHTVLDDLEK-YPNGLDESRVRKYLFQILRGIEFCHSHNIIHRDIKPENILVSQS--GVVKLCDFGFART 149 (286)
T ss_pred CeEEEEEecCCccHHHHHHh-ccCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEECCC--CcEEEEeeeeeee
Confidence 44689999999988776532 122355666555555544 778899999999999999999865 8999999999877
Q ss_pred cCH
Q 002039 318 LSS 320 (977)
Q Consensus 318 l~~ 320 (977)
+..
T Consensus 150 ~~~ 152 (286)
T cd07846 150 LAA 152 (286)
T ss_pred ccC
Confidence 643
No 330
>cd05050 PTKc_Musk Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase. Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates M
Probab=99.01 E-value=1.5e-09 Score=119.96 Aligned_cols=140 Identities=18% Similarity=0.179 Sum_probs=90.3
Q ss_pred cccccccccEEEEEEec------CCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccC
Q 002039 124 TPLATASIAQVHRATLV------DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELD 197 (977)
Q Consensus 124 ~piasaSigqV~~A~l~------~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld 197 (977)
+.||.|++|+||+|+.+ ++..||||+.+.+....... +
T Consensus 11 ~~lg~g~~g~v~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~------------------------------------~ 54 (288)
T cd05050 11 RDIGQGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQA------------------------------------D 54 (288)
T ss_pred ccccccccccEEEEEEcccCCCCcceeEEEEecCCCcCHHHHH------------------------------------H
Confidence 57899999999999863 57889999876543211110 2
Q ss_pred cHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeee-cCCceEEeeccCCCCCCChHHHHh--------------
Q 002039 198 FNSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLEA-------------- 262 (977)
Q Consensus 198 ~~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLVmE~i~G~~L~~~~~~~~-------------- 262 (977)
+.+|+..+.++.+ ..-+.+-..+. ....+++|||++|.+|.+......
T Consensus 55 ~~~ei~~l~~l~h-----------------~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~ 117 (288)
T cd05050 55 FQREAALMAEFDH-----------------PNIVKLLGVCAVGKPMCLLFEYMAYGDLNEFLRHRSPRAQCSLSHSTSSA 117 (288)
T ss_pred HHHHHHHHHhcCC-----------------CchheEEEEEcCCCccEEEEecCCCCCHHHHHHHcCcccccccccccccc
Confidence 3344444443321 00122222222 345689999999998877643211
Q ss_pred -------cCCCHHHHHHHHHHHH--HHHHHhcCccccCCCCCCeEEccCCCCceEEEeccccccc
Q 002039 263 -------FGVNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKL 318 (977)
Q Consensus 263 -------~~~~~~~l~~~l~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l 318 (977)
..++...+...+.+++ +..+|..|++|+|+||.||+++.+ +.++|+|||++..+
T Consensus 118 ~~~~~~~~~l~~~~~~~~~~~i~~aL~~lH~~~i~H~dl~p~nil~~~~--~~~~l~dfg~~~~~ 180 (288)
T cd05050 118 RKCGLNPLPLSCTEQLCIAKQVAAGMAYLSERKFVHRDLATRNCLVGEN--MVVKIADFGLSRNI 180 (288)
T ss_pred ccccccccccCHHHHHHHHHHHHHHHHHHHhCCeecccccHhheEecCC--CceEECccccceec
Confidence 1123333344444433 678999999999999999999865 89999999998754
No 331
>cd06606 STKc_MAPKKK Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKK
Probab=99.01 E-value=1.4e-09 Score=116.91 Aligned_cols=143 Identities=19% Similarity=0.144 Sum_probs=95.5
Q ss_pred cccccccccEEEEEEec-CCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCcHHHH
Q 002039 124 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (977)
Q Consensus 124 ~piasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea 202 (977)
+.|+.|++|.||+|+.. +|+.|+||+.+...... ... + .+.+|.
T Consensus 6 ~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~--~~~-----------------------~----------~~~~e~ 50 (260)
T cd06606 6 ELLGRGSFGSVYLALDKDTGELMAVKSVELSGDSE--EEL-----------------------E----------ALEREI 50 (260)
T ss_pred eEeeecCceEEEEEEECCCCcEEEEEEeeccccch--HHH-----------------------H----------HHHHHH
Confidence 67999999999999985 79999999876432210 000 0 123344
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeee-c--CCceEEeeccCCCCCCChHHHHhcCCCHHHHHHHHHHHH-
Q 002039 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-S--SETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY- 278 (977)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~--~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~- 278 (977)
..+.++.+ ..-+.+..... . ...+++|||++|.+|.++.... ..++...+...+.+++
T Consensus 51 ~~l~~l~~-----------------~~i~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~-~~~~~~~~~~~~~~l~~ 112 (260)
T cd06606 51 RILSSLQH-----------------PNIVRYYGSERDEEKNTLNIFLEYVSGGSLSSLLKKF-GKLPEPVIRKYTRQILE 112 (260)
T ss_pred HHHHHcCC-----------------CCEeeEEEEEecCCCCeEEEEEEecCCCcHHHHHHHc-CCCCHHHHHHHHHHHHH
Confidence 44443321 00111212222 2 4568999999999998874422 2455555555444444
Q ss_pred -HHHHHhcCccccCCCCCCeEEccCCCCceEEEecccccccCHH
Q 002039 279 -AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSSS 321 (977)
Q Consensus 279 -l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~~ 321 (977)
+..+|..|++|+|++|.||+++.+ +.++|+|||.+..+...
T Consensus 113 ~l~~lh~~~~~h~dl~p~ni~i~~~--~~~~l~d~~~~~~~~~~ 154 (260)
T cd06606 113 GLAYLHSNGIVHRDIKGANILVDSD--GVVKLADFGCAKRLGDI 154 (260)
T ss_pred HHHHHHHCCccccCCCHHHEEEcCC--CCEEEcccccEEecccc
Confidence 678899999999999999999965 89999999998877654
No 332
>cd05094 PTKc_TrkC Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some n
Probab=99.01 E-value=1.5e-09 Score=120.24 Aligned_cols=79 Identities=15% Similarity=0.209 Sum_probs=58.9
Q ss_pred cCCceEEeeccCCCCCCChHHHHh---------------cCCCHHHHHHHHHHHH--HHHHHhcCccccCCCCCCeEEcc
Q 002039 239 SSETVLILEFMDGIRLNDCESLEA---------------FGVNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSK 301 (977)
Q Consensus 239 ~~~~vLVmE~i~G~~L~~~~~~~~---------------~~~~~~~l~~~l~~~~--l~~i~~~G~~H~D~hPgNIlv~~ 301 (977)
....+|||||++|.+|.++..... ..++...+...+.++. +..+|..|++|+|+||.||+++.
T Consensus 79 ~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~i~H~dlkp~Nil~~~ 158 (291)
T cd05094 79 GDPLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIASQIASGMVYLASQHFVHRDLATRNCLVGA 158 (291)
T ss_pred CCceEEEEecCCCCcHHHHHHhcCcccccccccccccCcCCCCHHHHHHHHHHHHHHHHHHHhCCeeecccCcceEEEcc
Confidence 456799999999999988743211 0133344444444443 67889999999999999999986
Q ss_pred CCCCceEEEecccccccC
Q 002039 302 DPPHRPILLDFGLTKKLS 319 (977)
Q Consensus 302 ~~~g~i~LiDFG~~~~l~ 319 (977)
+ +.++|+|||++....
T Consensus 159 ~--~~~~l~dfg~a~~~~ 174 (291)
T cd05094 159 N--LLVKIGDFGMSRDVY 174 (291)
T ss_pred C--CcEEECCCCcccccC
Confidence 5 899999999987653
No 333
>cd08217 STKc_Nek2 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exi
Probab=99.01 E-value=1.4e-09 Score=117.89 Aligned_cols=77 Identities=18% Similarity=0.244 Sum_probs=58.2
Q ss_pred ceEEeeccCCCCCCChHHHH---hcCCCHHHHHHHHHHHH--HHHHH-----hcCccccCCCCCCeEEccCCCCceEEEe
Q 002039 242 TVLILEFMDGIRLNDCESLE---AFGVNKQKVVEEITRAY--AHQIY-----VDGFFNGDPHPGNFLVSKDPPHRPILLD 311 (977)
Q Consensus 242 ~vLVmE~i~G~~L~~~~~~~---~~~~~~~~l~~~l~~~~--l~~i~-----~~G~~H~D~hPgNIlv~~~~~g~i~LiD 311 (977)
.+++|||++|.+|.++.... ...++...+...+.++. +..+| ..|++|+|+||+||+++.+ +.++|+|
T Consensus 76 ~~~~~e~~~~~~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~~~~~~i~h~dl~p~nili~~~--~~~kl~d 153 (265)
T cd08217 76 LYIVMEYCEGGDLAQLIQKCKKERKYIEEEFIWRILTQLLLALYECHNRSDPGNTVLHRDLKPANIFLDAN--NNVKLGD 153 (265)
T ss_pred EEEEehhccCCCHHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHhcCccccCcceecCCCHHHEEEecC--CCEEEec
Confidence 47999999999998774322 12344444444444443 67788 8899999999999999865 8999999
Q ss_pred cccccccCH
Q 002039 312 FGLTKKLSS 320 (977)
Q Consensus 312 FG~~~~l~~ 320 (977)
||++..+..
T Consensus 154 ~g~~~~~~~ 162 (265)
T cd08217 154 FGLAKILGH 162 (265)
T ss_pred ccccccccC
Confidence 999987754
No 334
>cd05058 PTKc_Met_Ron Catalytic domain of the Protein Tyrosine Kinases, Met and Ron. Protein Tyrosine Kinase (PTK) family; Met and Ron; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Met and Ron are receptor tyr kinases (RTKs) composed of an alpha-beta heterodimer. The extracellular alpha chain is disulfide linked to the beta chain, which contains an extracellular ligand-binding region with a sema domain, a PSI domain and four IPT repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Met binds to the ligand, hepatocyte growth factor/scatter factor (HGF/SF), and is also ca
Probab=99.00 E-value=1.7e-09 Score=117.45 Aligned_cols=79 Identities=14% Similarity=0.219 Sum_probs=58.0
Q ss_pred CCceEEeeccCCCCCCChHHHHhcCCCHHHHHHHHHHHH--HHHHHhcCccccCCCCCCeEEccCCCCceEEEecccccc
Q 002039 240 SETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKK 317 (977)
Q Consensus 240 ~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~ 317 (977)
+..+++|||+.|.+|.++............+...+.++. +..+|..|++|+|+||.||+++.+ +.++|+|||++..
T Consensus 70 ~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlk~~nili~~~--~~~kl~dfg~~~~ 147 (262)
T cd05058 70 GSPLVVLPYMKHGDLRNFIRSETHNPTVKDLIGFGLQVAKGMEYLASKKFVHRDLAARNCMLDES--FTVKVADFGLARD 147 (262)
T ss_pred CCcEEEEecCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCccccccCcceEEEcCC--CcEEECCcccccc
Confidence 446899999999998876432222233444444333433 678899999999999999999865 8899999999876
Q ss_pred cCH
Q 002039 318 LSS 320 (977)
Q Consensus 318 l~~ 320 (977)
+..
T Consensus 148 ~~~ 150 (262)
T cd05058 148 IYD 150 (262)
T ss_pred ccC
Confidence 543
No 335
>smart00221 STYKc Protein kinase; unclassified specificity. Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase.
Probab=99.00 E-value=1.4e-09 Score=114.62 Aligned_cols=140 Identities=19% Similarity=0.205 Sum_probs=94.8
Q ss_pred cccccccccEEEEEEec-CCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCcHHHH
Q 002039 124 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (977)
Q Consensus 124 ~piasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea 202 (977)
++|++|++|+||+++.. +++.|+||+.+...... .. -++.+|+
T Consensus 5 ~~i~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~---~~---------------------------------~~~~~e~ 48 (225)
T smart00221 5 KKLGEGAFGKVYLARDKGTGELVAVKVLKKEKTEK---QR---------------------------------EEFLREI 48 (225)
T ss_pred eEeecCCCeEEEEEEEcCCCcEEEEEeeccccchH---HH---------------------------------HHHHHHH
Confidence 67999999999999986 48999999987543220 00 0233444
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceee---e-cCCceEEeeccCCCCCCChHHHHhcCCCHHHHHHHHHHHH
Q 002039 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVI---Q-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY 278 (977)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~---~-~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~ 278 (977)
+.+.++++ ..+++++ . ....+++|||++|.+|.++........+...+...+.++.
T Consensus 49 ~~~~~~~~--------------------~~i~~~~~~~~~~~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~ 108 (225)
T smart00221 49 RILKKLKH--------------------PNIVKLYGVFEDPEPLYLVMEYCEGGDLFDYLRKKGGKLSEEEARFYLRQIL 108 (225)
T ss_pred HHHHhCCC--------------------CChhhheeeeecCCceEEEEeccCCCCHHHHHHhcccCCCHHHHHHHHHHHH
Confidence 44444311 1122222 1 4667899999999988876442221145444444444433
Q ss_pred --HHHHHhcCccccCCCCCCeEEccCCCCceEEEecccccccCHH
Q 002039 279 --AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSSS 321 (977)
Q Consensus 279 --l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~~ 321 (977)
+..+|..|++|+|++|.||+++.+ +.++|+|||.+..+...
T Consensus 109 ~~l~~lh~~~i~h~di~~~ni~v~~~--~~~~l~d~g~~~~~~~~ 151 (225)
T smart00221 109 EALEYLHSLGIVHRDLKPENILLGMD--GLVKLADFGLARFIHRD 151 (225)
T ss_pred HHHHHHHhCCeecCCCCHHHEEEcCC--CCEEEeeCceeeEecCc
Confidence 678899999999999999999865 89999999998877544
No 336
>cd05099 PTKc_FGFR4 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 4. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 4 (FGFR4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR4 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=99.00 E-value=2.3e-09 Score=120.24 Aligned_cols=80 Identities=16% Similarity=0.184 Sum_probs=59.4
Q ss_pred cCCceEEeeccCCCCCCChHHHHh---------------cCCCHHHHHHHHHHHH--HHHHHhcCccccCCCCCCeEEcc
Q 002039 239 SSETVLILEFMDGIRLNDCESLEA---------------FGVNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSK 301 (977)
Q Consensus 239 ~~~~vLVmE~i~G~~L~~~~~~~~---------------~~~~~~~l~~~l~~~~--l~~i~~~G~~H~D~hPgNIlv~~ 301 (977)
....+++|||++|.+|.++..... ..+....+...+.++. +..+|..|++|+|+||+||+++.
T Consensus 90 ~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~gi~H~dlkp~Nill~~ 169 (314)
T cd05099 90 EGPLYVIVEYAAKGNLREFLRARRPPGPDYTFDITKVPEEQLSFKDLVSCAYQVARGMEYLESRRCIHRDLAARNVLVTE 169 (314)
T ss_pred CCceEEEEecCCCCcHHHHHHhcCCCcccccccccCCcccccCHHHHHHHHHHHHHHHHHHHHCCeeeccccceeEEEcC
Confidence 355689999999999987753211 1233444444444433 77899999999999999999986
Q ss_pred CCCCceEEEecccccccCH
Q 002039 302 DPPHRPILLDFGLTKKLSS 320 (977)
Q Consensus 302 ~~~g~i~LiDFG~~~~l~~ 320 (977)
+ ++++|+|||.++.+..
T Consensus 170 ~--~~~kL~Dfg~~~~~~~ 186 (314)
T cd05099 170 D--NVMKIADFGLARGVHD 186 (314)
T ss_pred C--CcEEEccccccccccc
Confidence 5 8999999999987643
No 337
>cd05053 PTKc_FGFR Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation,
Probab=99.00 E-value=2e-09 Score=119.14 Aligned_cols=143 Identities=20% Similarity=0.253 Sum_probs=92.5
Q ss_pred cccccccccEEEEEEec------CCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccC
Q 002039 124 TPLATASIAQVHRATLV------DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELD 197 (977)
Q Consensus 124 ~piasaSigqV~~A~l~------~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld 197 (977)
+.||.|++|.||+|..+ +...||+|+.+....... . .+
T Consensus 18 ~~ig~g~~g~v~~~~~~~~~~~~~~~~~a~k~~~~~~~~~~---~---------------------------------~~ 61 (293)
T cd05053 18 KPLGEGAFGQVVKAEAVGLDNPNETSTVAVKMLKDDATEKD---L---------------------------------SD 61 (293)
T ss_pred eEecccccccEEEEEEecCCCCCCceeEEEEEccCCCCHHH---H---------------------------------HH
Confidence 68999999999999864 236799998765322110 0 02
Q ss_pred cHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeee-cCCceEEeeccCCCCCCChHHHH---------------
Q 002039 198 FNSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLE--------------- 261 (977)
Q Consensus 198 ~~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLVmE~i~G~~L~~~~~~~--------------- 261 (977)
+.+|...+.++.+. ..-+.+-.++. ....+++|||++|.+|.++....
T Consensus 62 ~~~E~~~l~~l~~h----------------~~i~~~~~~~~~~~~~~li~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~ 125 (293)
T cd05053 62 LVSEMEMMKMIGKH----------------KNIINLLGVCTQEGPLYVVVEYAAHGNLRDFLRARRPPGEYASPDDPRPP 125 (293)
T ss_pred HHHHHHHHHhhcCC----------------CCeeeEEEEEcCCCCeEEEEEeCCCCcHHHHHHhcCCCcccccccccccc
Confidence 33444444443110 11122323332 45578999999999988764321
Q ss_pred hcCCCHHHHHHHHHHHH--HHHHHhcCccccCCCCCCeEEccCCCCceEEEecccccccCH
Q 002039 262 AFGVNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 320 (977)
Q Consensus 262 ~~~~~~~~l~~~l~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 320 (977)
...++...+...+.++. +..+|..|++|+|++|.||+++.+ +.++|+|||.+..+..
T Consensus 126 ~~~l~~~~~~~i~~qi~~al~~LH~~~ivH~dlkp~Nil~~~~--~~~kL~Dfg~~~~~~~ 184 (293)
T cd05053 126 EETLTQKDLVSFAYQVARGMEFLASKKCIHRDLAARNVLVTED--HVMKIADFGLARDIHH 184 (293)
T ss_pred ccccCHHHHHHHHHHHHHHHHHHHHCCccccccceeeEEEcCC--CeEEeCcccccccccc
Confidence 11233444444444433 778899999999999999999865 8999999999886643
No 338
>cd08215 STKc_Nek Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They
Probab=99.00 E-value=1.5e-09 Score=116.85 Aligned_cols=143 Identities=17% Similarity=0.206 Sum_probs=94.9
Q ss_pred cccccccccEEEEEEec-CCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCcHHHH
Q 002039 124 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (977)
Q Consensus 124 ~piasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea 202 (977)
+.|+.|++|.||+|... +++.|+||+........ .+ .. .+..|.
T Consensus 6 ~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~--~~---------------------------~~------~~~~e~ 50 (258)
T cd08215 6 KQIGKGSFGKVYLVRRKSDGKLYVLKEIDLSNMSE--KE---------------------------RE------DALNEV 50 (258)
T ss_pred eeeccCCCeEEEEEEEcCCCcEEEEEEeecccCCh--HH---------------------------HH------HHHHHH
Confidence 57899999999999974 78999999865322110 00 00 122333
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeee-cCCceEEeeccCCCCCCChHHHHh---cCCCHHHHHHHHHHHH
Q 002039 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLEA---FGVNKQKVVEEITRAY 278 (977)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLVmE~i~G~~L~~~~~~~~---~~~~~~~l~~~l~~~~ 278 (977)
+.+..+++ ..-+.+...+. ....+|||||++|.+|.+...... ..++...+...+.+++
T Consensus 51 ~~l~~l~~-----------------~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~ 113 (258)
T cd08215 51 KILKKLNH-----------------PNIIKYYESFEEKGKLCIVMEYADGGDLSQKIKKQKKEGKPFPEEQILDWFVQLC 113 (258)
T ss_pred HHHHhcCC-----------------CChhheEEEEecCCEEEEEEEecCCCcHHHHHHHhhccCCCcCHHHHHHHHHHHH
Confidence 33333321 00111111222 456689999999999987643321 3455666666665554
Q ss_pred --HHHHHhcCccccCCCCCCeEEccCCCCceEEEecccccccCH
Q 002039 279 --AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 320 (977)
Q Consensus 279 --l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 320 (977)
+..+|..|++|+|++|.||+++.+ +.++|+|||.+.....
T Consensus 114 ~~l~~lh~~~~~H~dl~~~nil~~~~--~~~~l~d~~~~~~~~~ 155 (258)
T cd08215 114 LALKYLHSRKILHRDIKPQNIFLTSN--GLVKLGDFGISKVLSS 155 (258)
T ss_pred HHHHHHHhCCEecccCChHHeEEcCC--CcEEECCccceeeccc
Confidence 788999999999999999999865 8899999999887654
No 339
>cd05032 PTKc_InsR_like Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological
Probab=99.00 E-value=1.3e-09 Score=119.35 Aligned_cols=141 Identities=18% Similarity=0.206 Sum_probs=91.4
Q ss_pred cccccccccEEEEEEec------CCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccC
Q 002039 124 TPLATASIAQVHRATLV------DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELD 197 (977)
Q Consensus 124 ~piasaSigqV~~A~l~------~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld 197 (977)
+.||.|++|.||+|..+ ++..||||+...+.... ....
T Consensus 12 ~~lg~g~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~~~~------------------------------------~~~~ 55 (277)
T cd05032 12 RELGQGSFGMVYEGLAKGVVKGEPETRVAIKTVNENASMR------------------------------------ERIE 55 (277)
T ss_pred eEecCCCCceEEEEEEeccCCCCcceeEEEEecCCccCHH------------------------------------HHHH
Confidence 57999999999999874 24789999865432100 0012
Q ss_pred cHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeee-cCCceEEeeccCCCCCCChHHHHhc---------CCCH
Q 002039 198 FNSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAF---------GVNK 267 (977)
Q Consensus 198 ~~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLVmE~i~G~~L~~~~~~~~~---------~~~~ 267 (977)
+.+|+..+..+.+ ...+.+-..+. ....++||||++|.+|.++...... ....
T Consensus 56 ~~~e~~~l~~~~~-----------------~~i~~~~~~~~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~ 118 (277)
T cd05032 56 FLNEASVMKEFNC-----------------HHVVRLLGVVSTGQPTLVVMELMAKGDLKSYLRSRRPEAENNPGLGPPTL 118 (277)
T ss_pred HHHHHHHHHhCCC-----------------CceeEEEEEEcCCCCcEEEEecCCCCCHHHHHHhcccchhhccCCCCCCH
Confidence 3445554444321 11122222222 4667999999999999876432110 1233
Q ss_pred HHHHHHHHHHH--HHHHHhcCccccCCCCCCeEEccCCCCceEEEecccccccC
Q 002039 268 QKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 319 (977)
Q Consensus 268 ~~l~~~l~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~ 319 (977)
..+...+.++. +..+|..|++|+|++|.||+++.+ +.++|+|||+++.+.
T Consensus 119 ~~~~~~~~~i~~~l~~lH~~~i~H~di~p~nill~~~--~~~kl~dfg~~~~~~ 170 (277)
T cd05032 119 QKFIQMAAEIADGMAYLAAKKFVHRDLAARNCMVAED--LTVKIGDFGMTRDIY 170 (277)
T ss_pred HHHHHHHHHHHHHHHHHHhCCccccccChheEEEcCC--CCEEECCcccchhhc
Confidence 34444444443 778999999999999999999965 899999999987653
No 340
>KOG1095 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=99.00 E-value=6.6e-10 Score=136.66 Aligned_cols=140 Identities=20% Similarity=0.201 Sum_probs=105.5
Q ss_pred cccccccccEEEEEEec--CCC----EEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccC
Q 002039 124 TPLATASIAQVHRATLV--DGR----QVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELD 197 (977)
Q Consensus 124 ~piasaSigqV~~A~l~--~G~----~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld 197 (977)
+.||.|.||.||+|+.. +|. .||||..++.... .++.+
T Consensus 698 ~~lG~G~FG~VY~g~~~~~~~~~~~~~vaiK~l~~~~~~------------------------------------~~~~~ 741 (1025)
T KOG1095|consen 698 RVLGKGAFGEVYEGTYSDVPGSVSPIQVAVKSLKRLSSE------------------------------------QEVSD 741 (1025)
T ss_pred eeeccccccceEEEEEecCCCCccceEEEEEeccccCCH------------------------------------HHHHH
Confidence 68999999999999975 454 4888876654321 13457
Q ss_pred cHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeee-cCCceEEeeccCCCCCCChHHHH------hcCCCHHHH
Q 002039 198 FNSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLE------AFGVNKQKV 270 (977)
Q Consensus 198 ~~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLVmE~i~G~~L~~~~~~~------~~~~~~~~l 270 (977)
|.+||..+..|.| ...|..--|-. ....++++|||+|+.|..+.... ...+...++
T Consensus 742 Fl~Ea~~m~~f~H-----------------pNiv~liGv~l~~~~~~i~leyM~gGDL~sflr~~r~~~~~~~~L~~~dL 804 (1025)
T KOG1095|consen 742 FLKEALLMSKFDH-----------------PNIVSLIGVCLDSGPPLILLEYMEGGDLLSFLRESRPAPFQPSNLSMRDL 804 (1025)
T ss_pred HHHHHHHHhcCCC-----------------cceeeEEEeecCCCCcEEEehhcccCcHHHHHHhcccccCCCCCCCHHHH
Confidence 8999999888754 11122222222 57789999999999998875543 344566777
Q ss_pred HHHHHHHH--HHHHHhcCccccCCCCCCeEEccCCCCceEEEeccccccc
Q 002039 271 VEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKL 318 (977)
Q Consensus 271 ~~~l~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l 318 (977)
+...+++. ++.+.+..||||||-..|+|++.. ..+++.||||++.+
T Consensus 805 l~~a~dvA~G~~YLe~~~fvHRDLAaRNCLL~~~--r~VKIaDFGlArDi 852 (1025)
T KOG1095|consen 805 LAFALDVAKGMNYLESKHFVHRDLAARNCLLDER--RVVKIADFGLARDI 852 (1025)
T ss_pred HHHHHHHhhhhHHHHhCCCcCcchhhhheeeccc--CcEEEcccchhHhh
Confidence 77777776 888999999999999999999965 78999999999844
No 341
>cd05078 PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3. Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity
Probab=99.00 E-value=5.6e-10 Score=121.26 Aligned_cols=81 Identities=16% Similarity=0.149 Sum_probs=58.4
Q ss_pred cCCceEEeeccCCCCCCChHHHHhcCCCHHHHHHHHHHHH--HHHHHhcCccccCCCCCCeEEccCCC------CceEEE
Q 002039 239 SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPP------HRPILL 310 (977)
Q Consensus 239 ~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~------g~i~Li 310 (977)
....++||||++|.+|.++.......++...+...+.++. +..+|..|++|+|+||.||+++.++. +.++++
T Consensus 71 ~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~iiH~dlkp~nili~~~~~~~~~~~~~~~l~ 150 (258)
T cd05078 71 GDESIMVQEYVKFGSLDTYLKKNKNLINISWKLEVAKQLAWALHFLEDKGLTHGNVCAKNVLLIREEDRKTGNPPFIKLS 150 (258)
T ss_pred CCCcEEEEecCCCCcHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCccceEEEecccccccCCCceEEec
Confidence 4667899999999999876432222345555444444443 77889999999999999999986521 137899
Q ss_pred ecccccccC
Q 002039 311 DFGLTKKLS 319 (977)
Q Consensus 311 DFG~~~~l~ 319 (977)
|||.+....
T Consensus 151 d~g~~~~~~ 159 (258)
T cd05078 151 DPGISITVL 159 (258)
T ss_pred ccccccccC
Confidence 999876553
No 342
>cd06620 PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=98.99 E-value=1.9e-09 Score=118.96 Aligned_cols=137 Identities=19% Similarity=0.227 Sum_probs=89.0
Q ss_pred cccccccccEEEEEEec-CCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCcHHHH
Q 002039 124 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (977)
Q Consensus 124 ~piasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea 202 (977)
+.||.|++|+||+|... +|+.||+|+........... ++.+|.
T Consensus 11 ~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~------------------------------------~~~~E~ 54 (284)
T cd06620 11 SDLGAGNGGSVSKVKHIPTGTVMAKKVVHIGAKSSVRK------------------------------------QILREL 54 (284)
T ss_pred HHcCCCCCeEEEEEEEcCCCcEEEEEEEEecCcchHHH------------------------------------HHHHHH
Confidence 56899999999999974 78999999876432211110 123344
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceee---e-cCCceEEeeccCCCCCCChHHHHhcCCCHHHHHHHHHHHH
Q 002039 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVI---Q-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY 278 (977)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~---~-~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~ 278 (977)
+.+..+.+ -.+++++ . ....+|||||++|.+|.++... ...+....+.....++.
T Consensus 55 ~~l~~l~h--------------------~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~-~~~~~~~~~~~~~~~i~ 113 (284)
T cd06620 55 QIMHECRS--------------------PYIVSFYGAFLNENNICMCMEFMDCGSLDRIYKK-GGPIPVEILGKIAVAVV 113 (284)
T ss_pred HHHHHcCC--------------------CCcceEeeeEecCCEEEEEEecCCCCCHHHHHHh-ccCCCHHHHHHHHHHHH
Confidence 44433321 1122222 1 4567899999999999776332 12233333333333332
Q ss_pred --HHHHHh-cCccccCCCCCCeEEccCCCCceEEEecccccccC
Q 002039 279 --AHQIYV-DGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 319 (977)
Q Consensus 279 --l~~i~~-~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~ 319 (977)
+..+|. +|++|+|++|.||+++.+ ++++|+|||++..+.
T Consensus 114 ~~l~~LH~~~~i~H~dl~p~nil~~~~--~~~~l~d~gl~~~~~ 155 (284)
T cd06620 114 EGLTYLYNVHRIMHRDIKPSNILVNSR--GQIKLCDFGVSGELI 155 (284)
T ss_pred HHHHHHHHhcCeeccCCCHHHEEECCC--CcEEEccCCcccchh
Confidence 566775 699999999999999865 899999999987653
No 343
>KOG0983 consensus Mitogen-activated protein kinase (MAPK) kinase MKK7/JNKK2 [Signal transduction mechanisms]
Probab=98.99 E-value=4.6e-10 Score=116.67 Aligned_cols=79 Identities=22% Similarity=0.394 Sum_probs=49.3
Q ss_pred cCCceEEeeccCCCCCCChHHHHhcCCCHHHHHHHHHHHHHHHHH----hcCccccCCCCCCeEEccCCCCceEEEeccc
Q 002039 239 SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAYAHQIY----VDGFFNGDPHPGNFLVSKDPPHRPILLDFGL 314 (977)
Q Consensus 239 ~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~l~~i~----~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~ 314 (977)
.+.-.+.||.+. .-++.+.. +-.+.-+++++-.+.-+.++.++ +||++|||+||.|||++.. |.|+|+|||+
T Consensus 163 n~dV~IcMelMs-~C~ekLlk-rik~piPE~ilGk~tva~v~AL~YLKeKH~viHRDvKPSNILlDe~--GniKlCDFGI 238 (391)
T KOG0983|consen 163 NTDVFICMELMS-TCAEKLLK-RIKGPIPERILGKMTVAIVKALYYLKEKHGVIHRDVKPSNILLDER--GNIKLCDFGI 238 (391)
T ss_pred CchHHHHHHHHH-HHHHHHHH-HhcCCchHHhhhhhHHHHHHHHHHHHHhcceeecccCccceEEccC--CCEEeecccc
Confidence 344556777763 11122211 11122234444444333333332 5999999999999999966 9999999999
Q ss_pred ccccCHH
Q 002039 315 TKKLSSS 321 (977)
Q Consensus 315 ~~~l~~~ 321 (977)
++++.+.
T Consensus 239 sGrlvdS 245 (391)
T KOG0983|consen 239 SGRLVDS 245 (391)
T ss_pred cceeecc
Confidence 9998654
No 344
>cd06647 STKc_PAK_I Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their bi
Probab=98.99 E-value=1.4e-09 Score=120.77 Aligned_cols=78 Identities=17% Similarity=0.300 Sum_probs=59.8
Q ss_pred cCCceEEeeccCCCCCCChHHHHhcCCCHHHHHHHHHHHH--HHHHHhcCccccCCCCCCeEEccCCCCceEEEeccccc
Q 002039 239 SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTK 316 (977)
Q Consensus 239 ~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~ 316 (977)
....++||||++|.+|.++. .........+...+.+++ +..+|..|++|+|++|.||+++.+ +.++|+|||++.
T Consensus 88 ~~~~~lv~e~~~~~~L~~~~--~~~~l~~~~~~~i~~~l~~al~~LH~~gi~H~dL~p~Nili~~~--~~~kL~dfg~~~ 163 (293)
T cd06647 88 GDELWVVMEYLAGGSLTDVV--TETCMDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDNILLGMD--GSVKLTDFGFCA 163 (293)
T ss_pred CCcEEEEEecCCCCcHHHHH--hhcCCCHHHHHHHHHHHHHHHHHHHhCCEeeccCCHHHEEEcCC--CCEEEccCccee
Confidence 45678999999999998763 233444445444444443 678899999999999999999865 889999999887
Q ss_pred ccCH
Q 002039 317 KLSS 320 (977)
Q Consensus 317 ~l~~ 320 (977)
.+..
T Consensus 164 ~~~~ 167 (293)
T cd06647 164 QITP 167 (293)
T ss_pred cccc
Confidence 6654
No 345
>cd06634 STKc_TAO2 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 2. Serine/threonine kinases (STKs), thousand-and-one amino acids 2 (TAO2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activatin
Probab=98.99 E-value=2.1e-09 Score=120.16 Aligned_cols=154 Identities=16% Similarity=0.139 Sum_probs=97.3
Q ss_pred CCChhhcccccCccccccccccEEEEEEec-CCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHh
Q 002039 111 GESMGGMFMDFVETPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWC 189 (977)
Q Consensus 111 g~~~~~~f~~~d~~piasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~ 189 (977)
.....+.|... +.+|.|++|+||+|+.+ +|+.||||..+..-... . ..
T Consensus 10 ~~~~~~~~~~~--~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~-~-----------------------~~----- 58 (308)
T cd06634 10 KDDPEKLFSDL--REIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQS-N-----------------------EK----- 58 (308)
T ss_pred cCCcHHHHHHH--HheeeCCCEEEEEEEEcCCCcEEEEEEEecccccC-h-----------------------HH-----
Confidence 34455555543 56999999999999974 78999999765321100 0 00
Q ss_pred hhcccccCcHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeee-cCCceEEeeccCCCCCCChHHHHhcCCCHH
Q 002039 190 KEAPKELDFNSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAFGVNKQ 268 (977)
Q Consensus 190 ~~l~~Eld~~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~ 268 (977)
.-++.+|.+.+..+.+ ...+.+...+. ....++||||+.| ++.+........++..
T Consensus 59 -----~~~~~~e~~~l~~l~h-----------------~~i~~~~~~~~~~~~~~lv~e~~~~-~l~~~~~~~~~~l~~~ 115 (308)
T cd06634 59 -----WQDIIKEVRFLQKLRH-----------------PNTIQYRGCYLREHTAWLVMEYCLG-SASDLLEVHKKPLQEV 115 (308)
T ss_pred -----HHHHHHHHHHHHhCCC-----------------CCcccEEEEEEcCCeeEEEEEccCC-CHHHHHHHcCCCCCHH
Confidence 0023344444444422 01122222222 4567899999986 5555433333345555
Q ss_pred HHHHHHHHHH--HHHHHhcCccccCCCCCCeEEccCCCCceEEEecccccccCH
Q 002039 269 KVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 320 (977)
Q Consensus 269 ~l~~~l~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 320 (977)
.+...+.+++ +..+|..|++|+|++|.||+++.+ +.++|+|||++..+..
T Consensus 116 ~~~~~~~~l~~~l~~LH~~~i~H~dl~p~nil~~~~--~~~kl~dfg~~~~~~~ 167 (308)
T cd06634 116 EIAAVTHGALQGLAYLHSHNMIHRDVKAGNILLSEP--GLVKLGDFGSASIMAP 167 (308)
T ss_pred HHHHHHHHHHHHHHHHHhCCcccCCCCHHhEEECCC--CcEEECCcccceeecC
Confidence 5555554443 778899999999999999999865 8999999999876543
No 346
>cd07865 STKc_CDK9 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK9 together with a cyclin partner (cyclin T1, T2a, T2b, or K) is the main component of distinct positive transcription elongation factors (P-TEFb), which function as Ser2 C-terminal domain kinases of RNA polymerase II. P-TEFb participates in multipl
Probab=98.99 E-value=1.4e-09 Score=121.13 Aligned_cols=77 Identities=22% Similarity=0.268 Sum_probs=56.3
Q ss_pred CceEEeeccCCCCCCChHHHHhcCCCHHHHHHHHHHHH--HHHHHhcCccccCCCCCCeEEccCCCCceEEEeccccccc
Q 002039 241 ETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKL 318 (977)
Q Consensus 241 ~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l 318 (977)
..++||||+.+ ++.+........++...+...+.+++ +..+|..|++|+|++|.||+++.+ +.++|+|||++..+
T Consensus 93 ~~~lv~e~~~~-~l~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~~i~H~dl~p~nil~~~~--~~~kl~dfg~~~~~ 169 (310)
T cd07865 93 SFYLVFEFCEH-DLAGLLSNKNVKFTLSEIKKVMKMLLNGLYYIHRNKILHRDMKAANILITKD--GILKLADFGLARAF 169 (310)
T ss_pred eEEEEEcCCCc-CHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHEEECCC--CcEEECcCCCcccc
Confidence 34899999976 44443221112355555555555544 788999999999999999999865 89999999998866
Q ss_pred CH
Q 002039 319 SS 320 (977)
Q Consensus 319 ~~ 320 (977)
..
T Consensus 170 ~~ 171 (310)
T cd07865 170 SL 171 (310)
T ss_pred cC
Confidence 43
No 347
>PTZ00024 cyclin-dependent protein kinase; Provisional
Probab=98.99 E-value=1.4e-09 Score=122.96 Aligned_cols=152 Identities=14% Similarity=0.128 Sum_probs=94.5
Q ss_pred cccccccccEEEEEEec-CCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCcHHHH
Q 002039 124 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (977)
Q Consensus 124 ~piasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea 202 (977)
+.||+|++|.||+|+.+ +|+.||||+.+.........+ ..........+.++.+|.
T Consensus 15 ~~ig~G~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~-----------------------~~~~~~~~~~~~~~~~E~ 71 (335)
T PTZ00024 15 AHLGEGTYGKVEKAYDTLTGKIVAIKKVKIIEISNDVTK-----------------------DRQLVGMCGIHFTTLREL 71 (335)
T ss_pred hcccCCCceeEEEEEECCCCCeEEEEEeecccccccccc-----------------------chhhhcccccchhHHHHH
Confidence 57999999999999974 799999998754221110000 000000111122345566
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeee-cCCceEEeeccCCCCCCChHHHHhcCCCHHHHHHHHHHHH--H
Q 002039 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--A 279 (977)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~--l 279 (977)
+.+..+.+ ..-+.+...+. ....++||||++| +|.+... ....++...+...+.+++ +
T Consensus 72 ~~l~~l~h-----------------~~iv~~~~~~~~~~~~~lv~e~~~~-~l~~~l~-~~~~~~~~~~~~~~~ql~~aL 132 (335)
T PTZ00024 72 KIMNEIKH-----------------ENIMGLVDVYVEGDFINLVMDIMAS-DLKKVVD-RKIRLTESQVKCILLQILNGL 132 (335)
T ss_pred HHHHhCCC-----------------cceeeeeEEEecCCcEEEEEecccc-CHHHHHH-hcCCCCHHHHHHHHHHHHHHH
Confidence 65555432 01122223332 4556899999986 5554432 122345555555555544 7
Q ss_pred HHHHhcCccccCCCCCCeEEccCCCCceEEEecccccccC
Q 002039 280 HQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 319 (977)
Q Consensus 280 ~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~ 319 (977)
..+|..|++|+|++|+||+++.+ +.++|+|||++..+.
T Consensus 133 ~~LH~~~i~H~dl~~~nill~~~--~~~kl~dfg~~~~~~ 170 (335)
T PTZ00024 133 NVLHKWYFMHRDLSPANIFINSK--GICKIADFGLARRYG 170 (335)
T ss_pred HHHHhCCeecccccHHHeEECCC--CCEEECCccceeecc
Confidence 88999999999999999999865 889999999987664
No 348
>cd07860 STKc_CDK2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex
Probab=98.99 E-value=8.9e-10 Score=121.24 Aligned_cols=141 Identities=17% Similarity=0.182 Sum_probs=90.1
Q ss_pred cccccccccEEEEEEec-CCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCcHHHH
Q 002039 124 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (977)
Q Consensus 124 ~piasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea 202 (977)
++|++|++|+||+|+.+ +|+.||||+.+...... ..+-.+.+|+
T Consensus 6 ~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~-----------------------------------~~~~~~~~E~ 50 (284)
T cd07860 6 EKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETE-----------------------------------GVPSTAIREI 50 (284)
T ss_pred eeecCCCceEEEEEEECCCCCEEEEEEcccccccc-----------------------------------ccchHHHHHH
Confidence 57999999999999974 79999999765321100 0001234455
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeee-cCCceEEeeccCCCCCCChHHHH-hcCCCHHHHHHHHHHHH--
Q 002039 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLE-AFGVNKQKVVEEITRAY-- 278 (977)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLVmE~i~G~~L~~~~~~~-~~~~~~~~l~~~l~~~~-- 278 (977)
+.+.++.+- .-+.+-..+. ....++||||+.+ +|.+..... ...++...+...+.+++
T Consensus 51 ~~l~~l~h~-----------------~i~~~~~~~~~~~~~~~v~e~~~~-~l~~~~~~~~~~~l~~~~~~~~~~~i~~~ 112 (284)
T cd07860 51 SLLKELNHP-----------------NIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASPLSGIPLPLIKSYLFQLLQG 112 (284)
T ss_pred HHHHhcCCC-----------------CCcchhhhcccCCcEEEEeecccc-CHHHHHHhCCCCCCCHHHHHHHHHHHHHH
Confidence 555444320 0111111222 3556899999975 555442211 12345555555554444
Q ss_pred HHHHHhcCccccCCCCCCeEEccCCCCceEEEecccccccC
Q 002039 279 AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 319 (977)
Q Consensus 279 l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~ 319 (977)
+..+|..|++|+|++|+||+++.+ +.++|+|||++..+.
T Consensus 113 l~~lh~~~i~H~~l~p~nill~~~--~~~~l~dfg~~~~~~ 151 (284)
T cd07860 113 LAFCHSHRVLHRDLKPQNLLINTE--GAIKLADFGLARAFG 151 (284)
T ss_pred HHHHHHCCeecCCCCHHHEEECCC--CCEEEeeccchhhcc
Confidence 778999999999999999999865 899999999876553
No 349
>cd05045 PTKc_RET Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein. Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leadi
Probab=98.98 E-value=2.3e-09 Score=118.65 Aligned_cols=79 Identities=15% Similarity=0.164 Sum_probs=58.5
Q ss_pred cCCceEEeeccCCCCCCChHHHHh-----------------------cCCCHHHHHHHHHHHH--HHHHHhcCccccCCC
Q 002039 239 SSETVLILEFMDGIRLNDCESLEA-----------------------FGVNKQKVVEEITRAY--AHQIYVDGFFNGDPH 293 (977)
Q Consensus 239 ~~~~vLVmE~i~G~~L~~~~~~~~-----------------------~~~~~~~l~~~l~~~~--l~~i~~~G~~H~D~h 293 (977)
....+++|||+.|.+|.++..... ..++...+...+.++. +..+|..|++|+|+|
T Consensus 75 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~ivH~dik 154 (290)
T cd05045 75 DGPLLLIVEYAKYGSLRSFLRESRKVGPSYLGSDGNRNSSYLDNPDERALTMGDLISFAWQISRGMQYLAEMKLVHRDLA 154 (290)
T ss_pred CCCcEEEEEecCCCCHHHHHHhcCCccccccccccccccccccCccccccCHHHHHHHHHHHHHHHHHHHHCCeehhhhh
Confidence 466789999999999987643110 1123344444444444 788999999999999
Q ss_pred CCCeEEccCCCCceEEEecccccccC
Q 002039 294 PGNFLVSKDPPHRPILLDFGLTKKLS 319 (977)
Q Consensus 294 PgNIlv~~~~~g~i~LiDFG~~~~l~ 319 (977)
|.||+++.+ +.++|+|||++..+.
T Consensus 155 p~nill~~~--~~~kl~dfg~~~~~~ 178 (290)
T cd05045 155 ARNVLVAEG--RKMKISDFGLSRDVY 178 (290)
T ss_pred hheEEEcCC--CcEEecccccccccc
Confidence 999999865 889999999987653
No 350
>cd06651 STKc_MEKK3 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development
Probab=98.98 E-value=2.2e-09 Score=117.08 Aligned_cols=145 Identities=16% Similarity=0.130 Sum_probs=92.7
Q ss_pred ccccccccccEEEEEEec-CCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCcHHH
Q 002039 123 ETPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSE 201 (977)
Q Consensus 123 ~~piasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~E 201 (977)
.+.+|.|++|.||+|... +|+.|++|+.+......... + .-..+.+|
T Consensus 7 ~~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~~~~~~~~--~------------------------------~~~~~~~e 54 (266)
T cd06651 7 GKLLGQGAFGRVYLCYDVDTGRELAAKQVQFDPESPETS--K------------------------------EVSALECE 54 (266)
T ss_pred cceecCCCCEEEEEEEEcCCCcEEEEEEeecCcCCchhH--H------------------------------HHHHHHHH
Confidence 367999999999999974 69999999865432110000 0 00023445
Q ss_pred HHHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeee---cCCceEEeeccCCCCCCChHHHHhcCCCHHHHHHHHHHHH
Q 002039 202 AENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ---SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY 278 (977)
Q Consensus 202 a~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~---~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~ 278 (977)
...+.++++ ..-+.+...+. ....+++|||++|.+|.+.... ....+.......+.++.
T Consensus 55 ~~~l~~l~h-----------------~~i~~~~~~~~~~~~~~~~l~~e~~~~~~L~~~l~~-~~~l~~~~~~~~~~qi~ 116 (266)
T cd06651 55 IQLLKNLQH-----------------ERIVQYYGCLRDRAEKTLTIFMEYMPGGSVKDQLKA-YGALTESVTRKYTRQIL 116 (266)
T ss_pred HHHHHHcCC-----------------CCeeeEEEEEEcCCCCEEEEEEeCCCCCcHHHHHHH-cCCCCHHHHHHHHHHHH
Confidence 555554432 01122222222 1335789999999999876432 12244444444444433
Q ss_pred --HHHHHhcCccccCCCCCCeEEccCCCCceEEEecccccccC
Q 002039 279 --AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 319 (977)
Q Consensus 279 --l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~ 319 (977)
+..+|..|++|+|++|.||+++.+ ++++|+|||++..+.
T Consensus 117 ~~l~~LH~~~i~H~~l~p~nil~~~~--~~~~l~dfg~~~~~~ 157 (266)
T cd06651 117 EGMSYLHSNMIVHRDIKGANILRDSA--GNVKLGDFGASKRLQ 157 (266)
T ss_pred HHHHHHHhCCeeeCCCCHHHEEECCC--CCEEEccCCCccccc
Confidence 678899999999999999999855 889999999987653
No 351
>KOG1094 consensus Discoidin domain receptor DDR1 [Signal transduction mechanisms]
Probab=98.98 E-value=7.1e-10 Score=125.53 Aligned_cols=141 Identities=19% Similarity=0.185 Sum_probs=100.3
Q ss_pred ccccccccccEEEEEEecCCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCcHHHH
Q 002039 123 ETPLATASIAQVHRATLVDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (977)
Q Consensus 123 ~~piasaSigqV~~A~l~~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea 202 (977)
.+.||+|-||.||.+....+..||||+.||+..+... -||+.|+
T Consensus 543 ~ekiGeGqFGEVhLCeveg~lkVAVK~Lr~~a~~~~r------------------------------------~~F~kEI 586 (807)
T KOG1094|consen 543 KEKIGEGQFGEVHLCEVEGPLKVAVKILRPDATKNAR------------------------------------NDFLKEI 586 (807)
T ss_pred hhhhcCcccceeEEEEecCceEEEEeecCcccchhHH------------------------------------HHHHHHH
Confidence 3689999999999999877799999999998654321 1567788
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeee-cCCceEEeeccCCCCCCChHHHHhcC-CCHHHHHHHHHHHH--
Q 002039 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAFG-VNKQKVVEEITRAY-- 278 (977)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLVmE~i~G~~L~~~~~~~~~~-~~~~~l~~~l~~~~-- 278 (977)
+-+.++++ ...+.+--|.. ...-.++|||++.+.|..+....... .+....+....+++
T Consensus 587 kiLsqLkh-----------------PNIveLvGVC~~DePicmI~EYmEnGDLnqFl~aheapt~~t~~~vsi~tqiasg 649 (807)
T KOG1094|consen 587 KILSRLKH-----------------PNIVELLGVCVQDDPLCMITEYMENGDLNQFLSAHELPTAETAPGVSICTQIASG 649 (807)
T ss_pred HHHhccCC-----------------CCeeEEEeeeecCCchHHHHHHHhcCcHHHHHHhccCcccccchhHHHHHHHHHH
Confidence 87777632 11222222211 23457899999999998875432112 23344455555544
Q ss_pred HHHHHhcCccccCCCCCCeEEccCCCCceEEEeccccccc
Q 002039 279 AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKL 318 (977)
Q Consensus 279 l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l 318 (977)
+..+-..+|+|||+-+.|+||+.+ +.+++.||||++.+
T Consensus 650 maYLes~nfVHrd~a~rNcLv~~e--~~iKiadfgmsR~l 687 (807)
T KOG1094|consen 650 MAYLESLNFVHRDLATRNCLVDGE--FTIKIADFGMSRNL 687 (807)
T ss_pred HHHHHhhchhhccccccceeecCc--ccEEecCccccccc
Confidence 666667899999999999999955 99999999999865
No 352
>KOG0589 consensus Serine/threonine protein kinase [General function prediction only]
Probab=98.98 E-value=4.4e-10 Score=127.07 Aligned_cols=145 Identities=13% Similarity=0.154 Sum_probs=104.7
Q ss_pred cccccccccEEEEEEec-CCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCcHHHH
Q 002039 124 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (977)
Q Consensus 124 ~piasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea 202 (977)
+-+|.|+||.++..+.+ ++..+|+|..+-.- .-+.-++ +-.+|.
T Consensus 10 ~~iG~GafG~a~lvrhk~~~~~~vlK~I~l~~-----------------------------~t~~~r~------~A~~E~ 54 (426)
T KOG0589|consen 10 RQVGRGAFGSALLVRHKSDDKLYVLKKINLEK-----------------------------LTEPERR------SAIQEM 54 (426)
T ss_pred hhcCccccchhhhhhhccCCceEEEEEEeccc-----------------------------cCchhhH------HHHHHH
Confidence 46899999999998874 78899999754110 0000000 234455
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeee-cCC-ceEEeeccCCCCCCChHHHHh-cCCCHHHHHHHHHHHH-
Q 002039 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSE-TVLILEFMDGIRLNDCESLEA-FGVNKQKVVEEITRAY- 278 (977)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~-~vLVmE~i~G~~L~~~~~~~~-~~~~~~~l~~~l~~~~- 278 (977)
.-+.++.+ +..|..++.+. .+. .++||+|++|+++.+...-.. .-+..+++...++++.
T Consensus 55 ~lis~~~h-----------------P~iv~y~ds~~~~~~~l~Ivm~Y~eGg~l~~~i~~~k~~~f~E~~i~~~~~Q~~~ 117 (426)
T KOG0589|consen 55 DLLSKLLH-----------------PNIVEYKDSFEEDGQLLCIVMEYCEGGDLAQLIKEQKGVLFPEERILKWFVQILL 117 (426)
T ss_pred HHHHhccC-----------------CCeeeeccchhcCCceEEEEEeecCCCCHHHHHHHHhhccccHHHHHHHHHHHHH
Confidence 44444432 22344555443 444 689999999999998754333 3466788888888877
Q ss_pred -HHHHHhcCccccCCCCCCeEEccCCCCceEEEecccccccCHHH
Q 002039 279 -AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSSSM 322 (977)
Q Consensus 279 -l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~~~ 322 (977)
+..+|+..|+|||+|+.||+++++ +.|+|-|||+++.+..+.
T Consensus 118 av~ylH~~~iLHRDlK~~Nifltk~--~~VkLgDfGlaK~l~~~~ 160 (426)
T KOG0589|consen 118 AVNYLHENRVLHRDLKCANIFLTKD--KKVKLGDFGLAKILNPED 160 (426)
T ss_pred HHHHHHhhhhhcccchhhhhhcccc--CceeecchhhhhhcCCch
Confidence 888999999999999999999977 789999999999998765
No 353
>cd06621 PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=98.98 E-value=2.9e-09 Score=117.67 Aligned_cols=141 Identities=16% Similarity=0.170 Sum_probs=92.2
Q ss_pred cccccccccEEEEEEec-CCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCcHHHH
Q 002039 124 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (977)
Q Consensus 124 ~piasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea 202 (977)
+.||.|++|.||++.++ +++.||+|+......... +-++.+|.
T Consensus 7 ~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~------------------------------------~~~~~~e~ 50 (287)
T cd06621 7 SRLGEGAGGSVTKCRLKNTGMIFALKTITTDPNPDL------------------------------------QKQILREL 50 (287)
T ss_pred EEeccCCceEEEEEEECCCCeEEEEEEEecCCchHH------------------------------------HHHHHHHH
Confidence 67999999999999984 689999998764321100 01234455
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeee---cCCceEEeeccCCCCCCChHHH-H--hcCCCHHHHHHHHHH
Q 002039 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ---SSETVLILEFMDGIRLNDCESL-E--AFGVNKQKVVEEITR 276 (977)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~---~~~~vLVmE~i~G~~L~~~~~~-~--~~~~~~~~l~~~l~~ 276 (977)
+.+.++.+ ..-+.+-..+. ....+|||||++|.+|.++... . ........+...+.+
T Consensus 51 ~~l~~l~h-----------------~~iv~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~l~~~~~~~i~~~ 113 (287)
T cd06621 51 EINKSCKS-----------------PYIVKYYGAFLDESSSSIGIAMEYCEGGSLDSIYKKVKKRGGRIGEKVLGKIAES 113 (287)
T ss_pred HHHHhCCC-----------------CCeeeeeeEEEccCCCeEEEEEEecCCCCHHHHHHHHHhcCCCCCHHHHHHHHHH
Confidence 55444422 01122222222 2346899999999999775331 1 112334444444444
Q ss_pred HH--HHHHHhcCccccCCCCCCeEEccCCCCceEEEecccccccC
Q 002039 277 AY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 319 (977)
Q Consensus 277 ~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~ 319 (977)
++ +..+|..|++|+|++|.||+++.+ +.++|+|||++..+.
T Consensus 114 i~~~L~~lH~~~i~H~dl~~~nil~~~~--~~~~l~dfg~~~~~~ 156 (287)
T cd06621 114 VLKGLSYLHSRKIIHRDIKPSNILLTRK--GQVKLCDFGVSGELV 156 (287)
T ss_pred HHHHHHHHHHCCcccCCCCHHHEEEecC--CeEEEeecccccccc
Confidence 33 678899999999999999999865 789999999987654
No 354
>KOG0664 consensus Nemo-like MAPK-related serine/threonine protein kinase [Signal transduction mechanisms]
Probab=98.98 E-value=4.7e-09 Score=108.91 Aligned_cols=47 Identities=21% Similarity=0.390 Sum_probs=40.6
Q ss_pred HHHHHhcCccccCCCCCCeEEccCCCCceEEEecccccccCHHHHHHHH
Q 002039 279 AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSSSMKQALA 327 (977)
Q Consensus 279 l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~~~r~~~~ 327 (977)
++.+|..||.|||+||||+||+.+ .-++++|||+++.-+.+++....
T Consensus 169 LKYLHsA~ILHRDIKPGNLLVNSN--CvLKICDFGLARvee~d~~~hMT 215 (449)
T KOG0664|consen 169 LKYLHTANILHRDIKPGNLLVNSN--CILKICDFGLARTWDQRDRLNMT 215 (449)
T ss_pred hHHHhhcchhhccCCCccEEeccC--ceEEecccccccccchhhhhhhH
Confidence 778899999999999999999865 78999999999988777666543
No 355
>KOG4721 consensus Serine/threonine protein kinase, contains leucine zipper domain [Signal transduction mechanisms]
Probab=98.98 E-value=2.3e-10 Score=128.73 Aligned_cols=160 Identities=22% Similarity=0.231 Sum_probs=107.8
Q ss_pred CCHHHHHHHHHHHhCCCCCCHHHHHHHHHHHhCCChhhcccccCccccccccccEEEEEEecCCCEEEEEEecCChhhhh
Q 002039 79 LPEPYISLLKQLQDSLPPRPVQEVSQTIEREFGESMGGMFMDFVETPLATASIAQVHRATLVDGRQVVVKVQHQGIKTII 158 (977)
Q Consensus 79 lp~~~~~~L~~Lqd~~p~~~~~~v~~~l~~elg~~~~~~f~~~d~~piasaSigqV~~A~l~~G~~VAVKv~~p~i~~~~ 158 (977)
+...|..+.++-|+..-.+||++|-.+ +=+|+|+-|.||+|+++ ++.||||-. .+.-
T Consensus 103 iGk~~s~e~k~qq~e~WeiPFe~IsEL------------------eWlGSGaQGAVF~Grl~-netVAVKKV----~elk 159 (904)
T KOG4721|consen 103 IGKAYSTEHKQQQEELWEIPFEEISEL------------------EWLGSGAQGAVFLGRLH-NETVAVKKV----RELK 159 (904)
T ss_pred hccceeeehhhhhhhhccCCHHHhhhh------------------hhhccCcccceeeeecc-CceehhHHH----hhhh
Confidence 444555556666666666666654321 34899999999999995 689999932 2233
Q ss_pred HhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCcHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeee
Q 002039 159 LEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ 238 (977)
Q Consensus 159 ~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~ 238 (977)
..|++ +++++++ ...+.+--|..
T Consensus 160 ETdIK----------------------------------------HLRkLkH-----------------~NII~FkGVCt 182 (904)
T KOG4721|consen 160 ETDIK----------------------------------------HLRKLKH-----------------PNIITFKGVCT 182 (904)
T ss_pred hhhHH----------------------------------------HHHhccC-----------------cceeeEeeeec
Confidence 33443 3333322 01111212211
Q ss_pred -cCCceEEeeccCCCCCCChHHHHhcCCCHHHHHHHHHHHH--HHHHHhcCccccCCCCCCeEEccCCCCceEEEecccc
Q 002039 239 -SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLT 315 (977)
Q Consensus 239 -~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~ 315 (977)
+.-.+++||||.-+.|..+.. ....+.+..++.....+. +.++|.+.|||||+|.-||||..+ ..|+|.|||..
T Consensus 183 qsPcyCIiMEfCa~GqL~~VLk-a~~~itp~llv~Wsk~IA~GM~YLH~hKIIHRDLKSPNiLIs~~--d~VKIsDFGTS 259 (904)
T KOG4721|consen 183 QSPCYCIIMEFCAQGQLYEVLK-AGRPITPSLLVDWSKGIAGGMNYLHLHKIIHRDLKSPNILISYD--DVVKISDFGTS 259 (904)
T ss_pred CCceeEEeeeccccccHHHHHh-ccCccCHHHHHHHHHHhhhhhHHHHHhhHhhhccCCCceEeecc--ceEEeccccch
Confidence 122479999999888887743 223456777777666655 888999999999999999999966 67999999999
Q ss_pred cccCHH
Q 002039 316 KKLSSS 321 (977)
Q Consensus 316 ~~l~~~ 321 (977)
+.+++.
T Consensus 260 ~e~~~~ 265 (904)
T KOG4721|consen 260 KELSDK 265 (904)
T ss_pred Hhhhhh
Confidence 888765
No 356
>cd08227 PK_STRAD_alpha Pseudokinase domain of STE20-related kinase adapter protein alpha. Protein Kinase family, STE20-related kinase adapter protein (STRAD) alpha subfamily, pseudokinase domain. The STRAD alpha subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hype
Probab=98.97 E-value=2.9e-09 Score=120.16 Aligned_cols=78 Identities=14% Similarity=0.135 Sum_probs=59.6
Q ss_pred cCCceEEeeccCCCCCCChHHHH-hcCCCHHHHHHHHHHHH--HHHHHhcCccccCCCCCCeEEccCCCCceEEEecccc
Q 002039 239 SSETVLILEFMDGIRLNDCESLE-AFGVNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLT 315 (977)
Q Consensus 239 ~~~~vLVmE~i~G~~L~~~~~~~-~~~~~~~~l~~~l~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~ 315 (977)
....++||||++|.+|.++.... ..+++...+...+.++. +..+|..|++|+|+||.||+++.+ +++++.|||..
T Consensus 71 ~~~~~lv~e~~~~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~iiH~dlkp~Nil~~~~--~~~~l~~~~~~ 148 (327)
T cd08227 71 DNELWVVTSFMAYGSAKDLICTHFMDGMSELAIAYILQGVLKALDYIHHMGYVHRSVKASHILISVD--GKVYLSGLRSN 148 (327)
T ss_pred CCEEEEEEeccCCCcHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCChhhEEEecC--CcEEEcccchh
Confidence 45678999999999998875322 12355555555555544 788999999999999999999865 88999999875
Q ss_pred ccc
Q 002039 316 KKL 318 (977)
Q Consensus 316 ~~l 318 (977)
..+
T Consensus 149 ~~~ 151 (327)
T cd08227 149 LSM 151 (327)
T ss_pred hcc
Confidence 443
No 357
>cd05100 PTKc_FGFR3 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 3. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 3 (FGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR3 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=98.97 E-value=3e-09 Score=120.46 Aligned_cols=79 Identities=15% Similarity=0.197 Sum_probs=57.6
Q ss_pred cCCceEEeeccCCCCCCChHHHHh---------------cCCCHHHHHHHHHHHH--HHHHHhcCccccCCCCCCeEEcc
Q 002039 239 SSETVLILEFMDGIRLNDCESLEA---------------FGVNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSK 301 (977)
Q Consensus 239 ~~~~vLVmE~i~G~~L~~~~~~~~---------------~~~~~~~l~~~l~~~~--l~~i~~~G~~H~D~hPgNIlv~~ 301 (977)
....+++|||++|.+|.++..... ..+....+...+.++. +..+|..|++|+|++|.||+++.
T Consensus 90 ~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~givH~dlkp~Nill~~ 169 (334)
T cd05100 90 DGPLYVLVEYASKGNLREYLRARRPPGMDYSFDTCKLPEEQLTFKDLVSCAYQVARGMEYLASQKCIHRDLAARNVLVTE 169 (334)
T ss_pred CCceEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHHHCCeeccccccceEEEcC
Confidence 345689999999999887643211 1123333333333333 67889999999999999999986
Q ss_pred CCCCceEEEecccccccC
Q 002039 302 DPPHRPILLDFGLTKKLS 319 (977)
Q Consensus 302 ~~~g~i~LiDFG~~~~l~ 319 (977)
+ +.++|+|||+++.+.
T Consensus 170 ~--~~~kL~Dfg~~~~~~ 185 (334)
T cd05100 170 D--NVMKIADFGLARDVH 185 (334)
T ss_pred C--CcEEECCcccceecc
Confidence 5 899999999987664
No 358
>cd05123 STKc_AGC Catalytic domain of AGC family Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the
Probab=98.97 E-value=3.5e-09 Score=113.95 Aligned_cols=78 Identities=28% Similarity=0.294 Sum_probs=59.2
Q ss_pred CCceEEeeccCCCCCCChHHHHhcCCCHHHHHHHHHHHH--HHHHHhcCccccCCCCCCeEEccCCCCceEEEecccccc
Q 002039 240 SETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKK 317 (977)
Q Consensus 240 ~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~ 317 (977)
...++||||++|.+|.+..... ...+...+...+.+++ +..+|..|++|+|++|.||+++.+ +.++|+|||++..
T Consensus 66 ~~~~~v~e~~~~~~L~~~l~~~-~~l~~~~~~~~~~qi~~~l~~lh~~~~~H~~l~p~ni~~~~~--~~~~l~d~~~~~~ 142 (250)
T cd05123 66 EKLYLVLEYAPGGELFSHLSKE-GRFSEERARFYAAEIVLALEYLHSLGIIYRDLKPENILLDAD--GHIKLTDFGLAKE 142 (250)
T ss_pred CeeEEEEecCCCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCcceEEEcCC--CcEEEeecCccee
Confidence 4458999999999887764321 2345555555444443 778899999999999999999865 8899999999877
Q ss_pred cCH
Q 002039 318 LSS 320 (977)
Q Consensus 318 l~~ 320 (977)
...
T Consensus 143 ~~~ 145 (250)
T cd05123 143 LSS 145 (250)
T ss_pred ccc
Confidence 644
No 359
>cd07851 STKc_p38 Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK
Probab=98.97 E-value=1.9e-09 Score=122.61 Aligned_cols=75 Identities=23% Similarity=0.380 Sum_probs=56.2
Q ss_pred CceEEeeccCCCCCCChHHHHhcCCCHHHHHHHHHHHH--HHHHHhcCccccCCCCCCeEEccCCCCceEEEeccccccc
Q 002039 241 ETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKL 318 (977)
Q Consensus 241 ~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l 318 (977)
..++||||+ |.+|.++. ....++...+...+.+++ +..+|..|++|+|++|.||+++.+ ++++|+|||++..+
T Consensus 94 ~~~lv~e~~-~~~L~~~~--~~~~l~~~~~~~~~~ql~~aL~~LH~~gi~H~dlkp~Nill~~~--~~~kL~dfg~~~~~ 168 (343)
T cd07851 94 DVYLVTHLM-GADLNNIV--KCQKLSDDHIQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNED--CELKILDFGLARHT 168 (343)
T ss_pred cEEEEEecC-CCCHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEECCC--CCEEEccccccccc
Confidence 357999999 55666553 233455555555444443 678999999999999999999865 89999999998876
Q ss_pred CH
Q 002039 319 SS 320 (977)
Q Consensus 319 ~~ 320 (977)
..
T Consensus 169 ~~ 170 (343)
T cd07851 169 DD 170 (343)
T ss_pred cc
Confidence 43
No 360
>cd07835 STKc_CDK1_like Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyc
Probab=98.97 E-value=1.9e-09 Score=118.63 Aligned_cols=141 Identities=16% Similarity=0.185 Sum_probs=90.5
Q ss_pred cccccccccEEEEEEec-CCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCcHHHH
Q 002039 124 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (977)
Q Consensus 124 ~piasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea 202 (977)
+.||.|++|+||+|+.+ +|+.||||+.+.+....- ..-++.+|.
T Consensus 5 ~~l~~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~-----------------------------------~~~~~~~E~ 49 (283)
T cd07835 5 EKIGEGTYGVVYKARDKLTGEIVALKKIRLETEDEG-----------------------------------VPSTAIREI 49 (283)
T ss_pred eEecCCCCeEEEEEEEcCCCCEEEEEEeeccccccc-----------------------------------chhHHHHHH
Confidence 46899999999999974 899999998754321100 000133344
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeee-cCCceEEeeccCCCCCCChHHHHh-cCCCHHHHHHHHHHHH--
Q 002039 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLEA-FGVNKQKVVEEITRAY-- 278 (977)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLVmE~i~G~~L~~~~~~~~-~~~~~~~l~~~l~~~~-- 278 (977)
..+.++.+ ..-+.+...+. ....+++|||+++ +|.++..... ..++...+...+.+++
T Consensus 50 ~~l~~l~~-----------------~~iv~~~~~~~~~~~~~iv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~i~~~ 111 (283)
T cd07835 50 SLLKELNH-----------------PNIVRLLDVVHSENKLYLVFEFLDL-DLKKYMDSSPLTGLDPPLIKSYLYQLLQG 111 (283)
T ss_pred HHHHhcCC-----------------CCccCHhheeccCCeEEEEEeccCc-CHHHHHhhCCCCCCCHHHHHHHHHHHHHH
Confidence 44444321 00111222222 4556899999964 6665532111 1345555555555444
Q ss_pred HHHHHhcCccccCCCCCCeEEccCCCCceEEEecccccccC
Q 002039 279 AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 319 (977)
Q Consensus 279 l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~ 319 (977)
+..+|..|++|+|++|.||+++.+ +.++|+|||++..+.
T Consensus 112 L~~lH~~~~~H~dl~p~nil~~~~--~~~~l~df~~~~~~~ 150 (283)
T cd07835 112 IAYCHSHRVLHRDLKPQNLLIDRE--GALKLADFGLARAFG 150 (283)
T ss_pred HHHHHHCCeeCCCCCHHHEEEcCC--CcEEEeecccccccC
Confidence 788999999999999999999865 899999999987654
No 361
>KOG1006 consensus Mitogen-activated protein kinase (MAPK) kinase MKK4 [Signal transduction mechanisms]
Probab=98.96 E-value=1.6e-10 Score=119.77 Aligned_cols=140 Identities=18% Similarity=0.201 Sum_probs=83.1
Q ss_pred cccccccccEEEEEEec-CCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCcHHHH
Q 002039 124 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (977)
Q Consensus 124 ~piasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea 202 (977)
.-||.|+||.|++-+.+ +|+..|||-.+-...+ .+. .++..|+|-...+
T Consensus 70 g~iG~G~fG~V~KM~hk~sg~~mAVKrIr~~n~~---keq---------------------------~rll~e~d~~mks 119 (361)
T KOG1006|consen 70 GEIGNGAFGTVNKMLHKPSGKLMAVKRIRSNNIE---KEQ---------------------------KRLLMEHDTVMKS 119 (361)
T ss_pred HHhcCCcchhhhhhhcCccCcEEEEEEeeeccch---HHH---------------------------HHHHHHHHHHHhh
Confidence 56899999999999874 8999999976643321 111 1111222222222
Q ss_pred H---HHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeeecCCceEEeeccCCCCCCChHH----HHhcCCCHHHHHHH--
Q 002039 203 E---NTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQSSETVLILEFMDGIRLNDCES----LEAFGVNKQKVVEE-- 273 (977)
Q Consensus 203 ~---n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~~~~~vLVmE~i~G~~L~~~~~----~~~~~~~~~~l~~~-- 273 (977)
. |+.+|...+- ..+.-++.||.++ .+++.+-. .....+..+-+...
T Consensus 120 ~~cp~IVkfyGa~F------------------------~EGdcWiCMELMd-~SlDklYk~vy~vq~~~ipE~Ilg~Itv 174 (361)
T KOG1006|consen 120 SNCPNIVKFYGALF------------------------SEGDCWICMELMD-ISLDKLYKRVYSVQKSRIPENILGHITV 174 (361)
T ss_pred cCCcHHHHHhhhhh------------------------cCCceeeeHHHHh-hhHHHHHHHHHHHHhccCcHhhhhheee
Confidence 2 3444433221 1566789999996 45443311 11112222211111
Q ss_pred -HHHHHHHHHH-hcCccccCCCCCCeEEccCCCCceEEEecccccccCHH
Q 002039 274 -ITRAYAHQIY-VDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSSS 321 (977)
Q Consensus 274 -l~~~~l~~i~-~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~~ 321 (977)
.+++ +..+- +..++|||+||.|||++.. |.|+|+|||+++++-+.
T Consensus 175 atV~A-L~yLK~~lkiIHRDvKPSNILldr~--G~vKLCDFGIcGqLv~S 221 (361)
T KOG1006|consen 175 ATVDA-LDYLKEELKIIHRDVKPSNILLDRH--GDVKLCDFGICGQLVDS 221 (361)
T ss_pred eehhH-HHHHHHHhhhhhccCChhheEEecC--CCEeeecccchHhHHHH
Confidence 1222 33332 4689999999999999966 89999999999987553
No 362
>cd05046 PTK_CCK4 Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4. Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is s
Probab=98.96 E-value=3.3e-09 Score=116.19 Aligned_cols=137 Identities=19% Similarity=0.185 Sum_probs=91.3
Q ss_pred cccccccccEEEEEEec------CCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccC
Q 002039 124 TPLATASIAQVHRATLV------DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELD 197 (977)
Q Consensus 124 ~piasaSigqV~~A~l~------~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld 197 (977)
+-+|.|++|.||+|+.+ +.+.|++|+....-... ..+ +
T Consensus 11 ~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~~~~~--------------------------~~~----------~ 54 (275)
T cd05046 11 TTLGRGEFGEVFLAKAKGIEEEGGETLVLVKALQKTKDEN--------------------------LQS----------E 54 (275)
T ss_pred eeecccceeEEEEEEeccCCcCCCcceEEEEccCCccchH--------------------------HHH----------H
Confidence 45899999999999964 34679999754321110 001 2
Q ss_pred cHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeee----cCCceEEeeccCCCCCCChHHHHhc--------CC
Q 002039 198 FNSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ----SSETVLILEFMDGIRLNDCESLEAF--------GV 265 (977)
Q Consensus 198 ~~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~----~~~~vLVmE~i~G~~L~~~~~~~~~--------~~ 265 (977)
+.+|++.+.++.+ ..+++++. ....++||||++|.+|.++...... .+
T Consensus 55 ~~~E~~~l~~l~h--------------------~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~l 114 (275)
T cd05046 55 FRRELDMFRKLSH--------------------KNVVRLLGLCREAEPHYMILEYTDLGDLKQFLRATKSKDEKLKPPPL 114 (275)
T ss_pred HHHHHHHHHhcCC--------------------cceeeeEEEECCCCcceEEEEecCCCcHHHHHHhcccccccccccCC
Confidence 4455555555432 11223332 3557999999999999877542221 24
Q ss_pred CHHHHHHHHHHHH--HHHHHhcCccccCCCCCCeEEccCCCCceEEEeccccccc
Q 002039 266 NKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKL 318 (977)
Q Consensus 266 ~~~~l~~~l~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l 318 (977)
....+...+.++. +..+|..|++|+|+||.||+++.+ +.+++.|||++...
T Consensus 115 ~~~~~~~~~~~l~~~l~~LH~~~i~H~dlkp~Nili~~~--~~~~l~~~~~~~~~ 167 (275)
T cd05046 115 STKQKVALCTQIALGMDHLSNARFVHRDLAARNCLVSSQ--REVKVSLLSLSKDV 167 (275)
T ss_pred CHHHHHHHHHHHHHHHHHhhhcCcccCcCccceEEEeCC--CcEEEccccccccc
Confidence 4555554444443 788999999999999999999865 88999999987644
No 363
>cd08220 STKc_Nek8 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with
Probab=98.96 E-value=2.4e-09 Score=115.67 Aligned_cols=143 Identities=17% Similarity=0.196 Sum_probs=93.2
Q ss_pred cccccccccEEEEEEe-cCCCEEEEEEecCCh-hhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCcHHH
Q 002039 124 TPLATASIAQVHRATL-VDGRQVVVKVQHQGI-KTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSE 201 (977)
Q Consensus 124 ~piasaSigqV~~A~l-~~G~~VAVKv~~p~i-~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~E 201 (977)
+.||.|++|.||+|.. .+++.||||+..... .... .-.+.+|
T Consensus 6 ~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~------------------------------------~~~~~~e 49 (256)
T cd08220 6 RVVGRGAFGIVHLCRRKADQKLVIIKQIPVEQMTKDE------------------------------------RLAAQNE 49 (256)
T ss_pred EEecccCceEEEEEEEcCCCcEEEEEEEeccccccHH------------------------------------HHHHHHH
Confidence 5799999999999987 478999999865321 1000 0023344
Q ss_pred HHHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeee-cCCceEEeeccCCCCCCChHHHHh-cCCCHHHHHHHHHHHH-
Q 002039 202 AENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLEA-FGVNKQKVVEEITRAY- 278 (977)
Q Consensus 202 a~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLVmE~i~G~~L~~~~~~~~-~~~~~~~l~~~l~~~~- 278 (977)
++.+.++.+ ..-+.+...+. ....++||||++|.+|.++..... ...+...+...+.+++
T Consensus 50 ~~~l~~~~~-----------------~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~ 112 (256)
T cd08220 50 CQVLKLLSH-----------------PNIIEYYENFLEDKALMIVMEYAPGGTLAEYIQKRCNSLLDEDTILHFFVQILL 112 (256)
T ss_pred HHHHhhCCC-----------------CchhheeeeEecCCEEEEEEecCCCCCHHHHHHHhcccCCCHHHHHHHHHHHHH
Confidence 444444321 00111112222 455689999999999988754321 2245555555444443
Q ss_pred -HHHHHhcCccccCCCCCCeEEccCCCCceEEEecccccccCH
Q 002039 279 -AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 320 (977)
Q Consensus 279 -l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 320 (977)
+..+|..|++|+|++|+||+++.+ ++.++|+|||++..+..
T Consensus 113 ~l~~lh~~~i~h~dl~~~nil~~~~-~~~~~l~d~~~~~~~~~ 154 (256)
T cd08220 113 ALHHVHTKLILHRDLKTQNILLDKH-KMVVKIGDFGISKILSS 154 (256)
T ss_pred HHHHHHhCCeecCCCCHHHEEEcCC-CCEEEEccCCCceecCC
Confidence 678899999999999999999854 35689999999987754
No 364
>PHA03390 pk1 serine/threonine-protein kinase 1; Provisional
Probab=98.96 E-value=4e-09 Score=115.39 Aligned_cols=79 Identities=22% Similarity=0.278 Sum_probs=61.9
Q ss_pred cCCceEEeeccCCCCCCChHHHHhcCCCHHHHHHHHHHHH--HHHHHhcCccccCCCCCCeEEccCCCC-ceEEEecccc
Q 002039 239 SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPH-RPILLDFGLT 315 (977)
Q Consensus 239 ~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g-~i~LiDFG~~ 315 (977)
....++||||++|.+|.++.... ..++...+...+.+++ +..+|..|++|+|++|.||+++.+ + +++|+|||++
T Consensus 81 ~~~~~iv~e~~~~~~L~~~l~~~-~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~nil~~~~--~~~~~l~dfg~~ 157 (267)
T PHA03390 81 LKGHVLIMDYIKDGDLFDLLKKE-GKLSEAEVKKIIRQLVEALNDLHKHNIIHNDIKLENVLYDRA--KDRIYLCDYGLC 157 (267)
T ss_pred CCeeEEEEEcCCCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHEEEeCC--CCeEEEecCccc
Confidence 45678999999999998764322 2456666666555554 788999999999999999999865 5 8999999998
Q ss_pred cccCH
Q 002039 316 KKLSS 320 (977)
Q Consensus 316 ~~l~~ 320 (977)
..+..
T Consensus 158 ~~~~~ 162 (267)
T PHA03390 158 KIIGT 162 (267)
T ss_pred eecCC
Confidence 77653
No 365
>KOG0194 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=98.95 E-value=1.4e-09 Score=125.27 Aligned_cols=140 Identities=19% Similarity=0.201 Sum_probs=98.3
Q ss_pred cccccccccEEEEEEec--CC---CEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCc
Q 002039 124 TPLATASIAQVHRATLV--DG---RQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDF 198 (977)
Q Consensus 124 ~piasaSigqV~~A~l~--~G---~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~ 198 (977)
+-||+|.||.||+|+++ ++ ..||||..+-.- ... + .+-.+|
T Consensus 163 kkLGeGaFGeV~~G~l~~~~~~~~~~VAvK~~k~~~--~~~--------------------------~------~~~~e~ 208 (474)
T KOG0194|consen 163 KKLGEGAFGEVFKGKLKLKNGFKVVPVAVKTTKGSS--ELT--------------------------K------EQIKEF 208 (474)
T ss_pred ceeecccccEEEEEEEEecCCceeeeeEEEeecccc--ccc--------------------------H------HHHHHH
Confidence 78999999999999985 33 238999654210 000 0 011257
Q ss_pred HHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeee----cCCceEEeeccCCCCCCChHHHHhcCCCHHHHHHHH
Q 002039 199 NSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ----SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEI 274 (977)
Q Consensus 199 ~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~----~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l 274 (977)
.+||+-+..+.| ..|-+.|. ....+||||+|.|++|.+...-....++..+-..-+
T Consensus 209 m~EArvMr~l~H--------------------~NVVr~yGVa~~~~Pl~ivmEl~~gGsL~~~L~k~~~~v~~~ek~~~~ 268 (474)
T KOG0194|consen 209 MKEARVMRQLNH--------------------PNVVRFYGVAVLEEPLMLVMELCNGGSLDDYLKKNKKSLPTLEKLRFC 268 (474)
T ss_pred HHHHHHHHhCCC--------------------CCEEEEEEEEcCCCccEEEEEecCCCcHHHHHHhCCCCCCHHHHHHHH
Confidence 789888776543 23334443 566799999999999998854332235555555555
Q ss_pred HHHH--HHHHHhcCccccCCCCCCeEEccCCCCceEEEecccccccC
Q 002039 275 TRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 319 (977)
Q Consensus 275 ~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~ 319 (977)
.++. ++.||..+++||||=..|+|++.+ +.+++.|||+++.-+
T Consensus 269 ~~AA~Gl~YLh~k~~IHRDIAARNcL~~~~--~~vKISDFGLs~~~~ 313 (474)
T KOG0194|consen 269 YDAARGLEYLHSKNCIHRDIAARNCLYSKK--GVVKISDFGLSRAGS 313 (474)
T ss_pred HHHHhHHHHHHHCCCcchhHhHHHheecCC--CeEEeCccccccCCc
Confidence 5554 888999999999999999999865 667999999977654
No 366
>KOG0670 consensus U4/U6-associated splicing factor PRP4 [RNA processing and modification]
Probab=98.95 E-value=1.1e-09 Score=122.36 Aligned_cols=146 Identities=20% Similarity=0.263 Sum_probs=89.3
Q ss_pred ccccccccEEEEEEe-cCCCEEEEEEecCCh--hhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCcHHH
Q 002039 125 PLATASIAQVHRATL-VDGRQVVVKVQHQGI--KTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSE 201 (977)
Q Consensus 125 piasaSigqV~~A~l-~~G~~VAVKv~~p~i--~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~E 201 (977)
-.|.|-|+.|.+|.. .-|+.|||||++-+- -+.=..++.+|+++... .| ..
T Consensus 439 ~~GkGvFs~Vvra~D~~r~~~vAiKIIRnNE~M~KtGl~EleiLkKL~~A----D~---------------------Ed- 492 (752)
T KOG0670|consen 439 YTGKGVFSTVVRARDQARGQEVAIKIIRNNEVMHKTGLKELEILKKLNDA----DP---------------------ED- 492 (752)
T ss_pred ccccceeeeeeeccccCCCCeeEEEEeecchHHhhhhhHHHHHHHHhhcc----Cc---------------------hh-
Confidence 469999999999997 468899999998652 22223455666555320 01 00
Q ss_pred HHHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeeecCCceEEeeccCCCCCCChHHHHhcCCC----HHHHHHHHHHH
Q 002039 202 AENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQSSETVLILEFMDGIRLNDCESLEAFGVN----KQKVVEEITRA 277 (977)
Q Consensus 202 a~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~~~~~vLVmE~i~G~~L~~~~~~~~~~~~----~~~l~~~l~~~ 277 (977)
-.++.++...|.+ -...+||+|-+. ..|.++ +...|.+ ...+-...-++
T Consensus 493 k~Hclrl~r~F~h------------------------knHLClVFE~Ls-lNLRev--LKKyG~nvGL~ikaVRsYaqQL 545 (752)
T KOG0670|consen 493 KFHCLRLFRHFKH------------------------KNHLCLVFEPLS-LNLREV--LKKYGRNVGLHIKAVRSYAQQL 545 (752)
T ss_pred hhHHHHHHHHhhh------------------------cceeEEEehhhh-chHHHH--HHHhCcccceeehHHHHHHHHH
Confidence 1234444333321 223467877652 344444 3343322 23222222222
Q ss_pred H--HHHHHhcCccccCCCCCCeEEccCCCCceEEEecccccccCHHHHH
Q 002039 278 Y--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSSSMKQ 324 (977)
Q Consensus 278 ~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~~~r~ 324 (977)
| ++.+-..||+|+||||.||||++. ...++|||||.+...++.+..
T Consensus 546 flALklLK~c~vlHaDIKPDNiLVNE~-k~iLKLCDfGSA~~~~eneit 593 (752)
T KOG0670|consen 546 FLALKLLKKCGVLHADIKPDNILVNES-KNILKLCDFGSASFASENEIT 593 (752)
T ss_pred HHHHHHHHhcCeeecccCccceEeccC-cceeeeccCcccccccccccc
Confidence 2 455557999999999999999865 467899999999998776544
No 367
>cd07831 STKc_MOK Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase. Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation.
Probab=98.95 E-value=3.2e-09 Score=116.54 Aligned_cols=140 Identities=19% Similarity=0.254 Sum_probs=88.9
Q ss_pred cccccccccEEEEEEec-CCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCcHHHH
Q 002039 124 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (977)
Q Consensus 124 ~piasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea 202 (977)
+.+|.|++|+||+|+.+ +++.||||+.+....... +....+|.
T Consensus 5 ~~lg~g~~~~v~~~~~~~~~~~~aik~~~~~~~~~~------------------------------------~~~~~~e~ 48 (282)
T cd07831 5 GKIGEGTFSEVLKAQSRKTGKYYAIKCMKKHFKSLE------------------------------------QVNNLREI 48 (282)
T ss_pred eeccccccceEEEEEEcCCCcEEEEEEehhccCCch------------------------------------hhhHHHHH
Confidence 46899999999999974 789999998654221100 00112233
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeee-c--CCceEEeeccCCCCCCChHHHHhcCCCHHHHHHHHHHHH-
Q 002039 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-S--SETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY- 278 (977)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~--~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~- 278 (977)
..+.++.+ ...-+.+...+. . ...++||||++| ++.+........++...+...+.+++
T Consensus 49 ~~l~~l~~----------------h~~i~~~~~~~~~~~~~~~~lv~e~~~~-~l~~~l~~~~~~~~~~~~~~~~~qi~~ 111 (282)
T cd07831 49 QALRRLSP----------------HPNILRLIEVLFDRKTGRLALVFELMDM-NLYELIKGRKRPLPEKRVKSYMYQLLK 111 (282)
T ss_pred HHHhhcCC----------------CCCccceEEEEecCCCCcEEEEEecCCc-cHHHHHHhccCCCCHHHHHHHHHHHHH
Confidence 33333321 001122222222 2 567899999987 44433221122345556555555544
Q ss_pred -HHHHHhcCccccCCCCCCeEEccCCCCceEEEecccccccC
Q 002039 279 -AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 319 (977)
Q Consensus 279 -l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~ 319 (977)
+..+|..|++|+|++|.||+++. +.++|+|||.+..+.
T Consensus 112 ~L~~LH~~~i~H~dl~p~ni~l~~---~~~kl~dfg~~~~~~ 150 (282)
T cd07831 112 SLDHMHRNGIFHRDIKPENILIKD---DILKLADFGSCRGIY 150 (282)
T ss_pred HHHHHHHCCceecccCHHHEEEcC---CCeEEEecccccccc
Confidence 78899999999999999999984 789999999987663
No 368
>PLN00009 cyclin-dependent kinase A; Provisional
Probab=98.95 E-value=2.9e-09 Score=117.94 Aligned_cols=138 Identities=14% Similarity=0.155 Sum_probs=86.6
Q ss_pred cccccccccEEEEEEec-CCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCcHHHH
Q 002039 124 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (977)
Q Consensus 124 ~piasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea 202 (977)
+.||.|++|.||+|+.+ +|+.||||+.+...... ...-.+.+|+
T Consensus 8 ~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~-----------------------------------~~~~~~~~e~ 52 (294)
T PLN00009 8 EKIGEGTYGVVYKARDRVTNETIALKKIRLEQEDE-----------------------------------GVPSTAIREI 52 (294)
T ss_pred EEecCCCCEEEEEEEecCCCcEEEEEehhhccccc-----------------------------------cchHHHHHHH
Confidence 57899999999999975 79999999754211100 0001234455
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceee---e-cCCceEEeeccCCCCCCChHHHHh-cCCCHHHHHHHHHHH
Q 002039 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVI---Q-SSETVLILEFMDGIRLNDCESLEA-FGVNKQKVVEEITRA 277 (977)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~---~-~~~~vLVmE~i~G~~L~~~~~~~~-~~~~~~~l~~~l~~~ 277 (977)
+.+.++.+ -.+++++ . ....++||||+++ ++.+...... ...+...+...+.++
T Consensus 53 ~~l~~l~h--------------------~~i~~~~~~~~~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~qi 111 (294)
T PLN00009 53 SLLKEMQH--------------------GNIVRLQDVVHSEKRLYLVFEYLDL-DLKKHMDSSPDFAKNPRLIKTYLYQI 111 (294)
T ss_pred HHHHhccC--------------------CCEeeEEEEEecCCeEEEEEecccc-cHHHHHHhCCCCCcCHHHHHHHHHHH
Confidence 55554432 1133333 2 4567899999975 4544321111 112333333333333
Q ss_pred H--HHHHHhcCccccCCCCCCeEEccCCCCceEEEeccccccc
Q 002039 278 Y--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKL 318 (977)
Q Consensus 278 ~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l 318 (977)
+ +..+|..|++|+|++|.||+++.+ ++.++|+|||++..+
T Consensus 112 ~~aL~~LH~~~i~H~dl~p~nill~~~-~~~~kl~dfg~~~~~ 153 (294)
T PLN00009 112 LRGIAYCHSHRVLHRDLKPQNLLIDRR-TNALKLADFGLARAF 153 (294)
T ss_pred HHHHHHHHhCCeeCCCCCcceEEEECC-CCEEEEccccccccc
Confidence 2 788999999999999999999854 367999999998755
No 369
>KOG0668 consensus Casein kinase II, alpha subunit [Signal transduction mechanisms; Cell cycle control, cell division, chromosome partitioning; Transcription]
Probab=98.94 E-value=6e-10 Score=113.07 Aligned_cols=142 Identities=15% Similarity=0.222 Sum_probs=94.9
Q ss_pred cccccccccEEEEEEe-cCCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCcHHHH
Q 002039 124 TPLATASIAQVHRATL-VDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (977)
Q Consensus 124 ~piasaSigqV~~A~l-~~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea 202 (977)
+.+|.|.++.|+.|+. .+.++++||+++|--.+.|.+++++|+.+.. +-
T Consensus 44 rk~GRGKYSEVFeg~~~~~~eK~ViKiLKPVkkkKIkREikIL~nL~g-------g~----------------------- 93 (338)
T KOG0668|consen 44 RKVGRGKYSEVFEGINITNNEKCVIKILKPVKKKKIKREIKILQNLRG-------GP----------------------- 93 (338)
T ss_pred HHHcCccHhhHhcccccCCCceEEEeeechHHHHHHHHHHHHHHhccC-------CC-----------------------
Confidence 5789999999999985 5789999999999888888888887776531 11
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeeecCCceEEeeccCCCCCCChHHHHhcCCCHHHHHHHHHHHHHHHH
Q 002039 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQSSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAYAHQI 282 (977)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~l~~i 282 (977)
|+..+-.... .+. |...-|+.||++......+-. .-...+.......++.+ +...
T Consensus 94 -NIi~L~DiV~--------------Dp~--------SktpaLiFE~v~n~Dfk~ly~-tl~d~dIryY~~elLkA-LdyC 148 (338)
T KOG0668|consen 94 -NIIKLLDIVK--------------DPE--------SKTPSLIFEYVNNTDFKQLYP-TLTDYDIRYYIYELLKA-LDYC 148 (338)
T ss_pred -Ceeehhhhhc--------------Ccc--------ccCchhHhhhhccccHHHHhh-hhchhhHHHHHHHHHHH-HhHH
Confidence 1111111100 000 333458999998865544311 00112222222233332 6677
Q ss_pred HhcCccccCCCCCCeEEccCCCCceEEEecccccccCHH
Q 002039 283 YVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSSS 321 (977)
Q Consensus 283 ~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~~ 321 (977)
|..||+|||+||.|+||+.. ..++.|||||++..+-+.
T Consensus 149 HS~GImHRDVKPhNvmIdh~-~rkLrlIDWGLAEFYHp~ 186 (338)
T KOG0668|consen 149 HSMGIMHRDVKPHNVMIDHE-LRKLRLIDWGLAEFYHPG 186 (338)
T ss_pred HhcCcccccCCcceeeechh-hceeeeeecchHhhcCCC
Confidence 89999999999999999975 467999999998776553
No 370
>cd07830 STKc_MAK_like Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertili
Probab=98.94 E-value=3.6e-09 Score=116.28 Aligned_cols=79 Identities=25% Similarity=0.350 Sum_probs=57.8
Q ss_pred cCCceEEeeccCCCCCCChHHHHh-cCCCHHHHHHHHHHHH--HHHHHhcCccccCCCCCCeEEccCCCCceEEEecccc
Q 002039 239 SSETVLILEFMDGIRLNDCESLEA-FGVNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLT 315 (977)
Q Consensus 239 ~~~~vLVmE~i~G~~L~~~~~~~~-~~~~~~~l~~~l~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~ 315 (977)
....++||||+ +.++.+...... ..++...+...+.+++ +..+|..|++|+|++|.||+++++ +.++|+|||.+
T Consensus 70 ~~~~~lv~e~~-~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~Lh~~~i~H~dl~~~ni~i~~~--~~~~l~d~~~~ 146 (283)
T cd07830 70 NDELYFVFEYM-EGNLYQLMKDRKGKPFSESVIRSIIYQILQGLAHIHKHGFFHRDLKPENLLVSGP--EVVKIADFGLA 146 (283)
T ss_pred CCcEEEEEecC-CCCHHHHHHhcccccCCHHHHHHHHHHHHHHHHHHHHCCcccCCCChhhEEEcCC--CCEEEeecccc
Confidence 35568999999 556655432211 2345555555555544 778899999999999999999865 89999999998
Q ss_pred cccCH
Q 002039 316 KKLSS 320 (977)
Q Consensus 316 ~~l~~ 320 (977)
..+..
T Consensus 147 ~~~~~ 151 (283)
T cd07830 147 REIRS 151 (283)
T ss_pred eeccC
Confidence 76643
No 371
>cd05092 PTKc_TrkA Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory
Probab=98.94 E-value=3e-09 Score=117.09 Aligned_cols=79 Identities=15% Similarity=0.166 Sum_probs=58.3
Q ss_pred cCCceEEeeccCCCCCCChHHHHh--------------cCCCHHHHHHHHHHHH--HHHHHhcCccccCCCCCCeEEccC
Q 002039 239 SSETVLILEFMDGIRLNDCESLEA--------------FGVNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKD 302 (977)
Q Consensus 239 ~~~~vLVmE~i~G~~L~~~~~~~~--------------~~~~~~~l~~~l~~~~--l~~i~~~G~~H~D~hPgNIlv~~~ 302 (977)
....+++|||++|.+|.++..... ..++...+...+.++. +..+|..|++|+|+||.||+++++
T Consensus 79 ~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~~i~H~dlkp~nil~~~~ 158 (280)
T cd05092 79 GRPLLMVFEYMRHGDLNRFLRSHGPDAKILAGGEDVAPGQLTLGQMLAIASQIASGMVYLASLHFVHRDLATRNCLVGQG 158 (280)
T ss_pred CCceEEEEecCCCCCHHHHHHhcCcchhhhcccccCCccccCHHHHHHHHHHHHHHHHHHHHCCeecccccHhhEEEcCC
Confidence 455789999999999987643211 1133444444444433 678899999999999999999865
Q ss_pred CCCceEEEecccccccC
Q 002039 303 PPHRPILLDFGLTKKLS 319 (977)
Q Consensus 303 ~~g~i~LiDFG~~~~l~ 319 (977)
+.++|+|||++..+.
T Consensus 159 --~~~kL~dfg~~~~~~ 173 (280)
T cd05092 159 --LVVKIGDFGMSRDIY 173 (280)
T ss_pred --CCEEECCCCceeEcC
Confidence 889999999987653
No 372
>cd07866 STKc_BUR1 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins. Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic
Probab=98.94 E-value=1.9e-09 Score=120.04 Aligned_cols=75 Identities=13% Similarity=0.223 Sum_probs=53.5
Q ss_pred ceEEeeccCCCCCCChHHHHhcCCCHHHHHHHHHHHH--HHHHHhcCccccCCCCCCeEEccCCCCceEEEecccccccC
Q 002039 242 TVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 319 (977)
Q Consensus 242 ~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~ 319 (977)
.++||||+++. +..........++...+...+.+++ +..+|..|++|+|++|+||+++++ +.++|+|||++..+.
T Consensus 90 ~~lv~~~~~~~-l~~~~~~~~~~~~~~~~~~i~~~l~~al~~lH~~~i~H~dl~p~nil~~~~--~~~~l~dfg~~~~~~ 166 (311)
T cd07866 90 VYMVTPYMDHD-LSGLLENPSVKLTESQIKCYMLQLLEGINYLHENHILHRDIKAANILIDNQ--GILKIADFGLARPYD 166 (311)
T ss_pred EEEEEecCCcC-HHHHHhccccCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECCC--CCEEECcCccchhcc
Confidence 47999999863 3222111112345555555544444 778999999999999999999865 899999999987654
No 373
>cd08528 STKc_Nek10 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 10. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 10 (Nek10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek10 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. No function has yet been ascribed to Nek10. The gene encoding Nek10 is a putative causative gene for breast cancer; it is located within a breast cancer susceptibility loci on chromosome 3p24.
Probab=98.94 E-value=3.5e-09 Score=115.50 Aligned_cols=81 Identities=14% Similarity=0.323 Sum_probs=60.1
Q ss_pred cCCceEEeeccCCCCCCChHHH-H--hcCCCHHHHHHHHHHHH--HHHHHh-cCccccCCCCCCeEEccCCCCceEEEec
Q 002039 239 SSETVLILEFMDGIRLNDCESL-E--AFGVNKQKVVEEITRAY--AHQIYV-DGFFNGDPHPGNFLVSKDPPHRPILLDF 312 (977)
Q Consensus 239 ~~~~vLVmE~i~G~~L~~~~~~-~--~~~~~~~~l~~~l~~~~--l~~i~~-~G~~H~D~hPgNIlv~~~~~g~i~LiDF 312 (977)
....+|+|||++|.+|.++... . ...++...+...+.+++ +..+|. .|++|+|++|.||+++.+ +.++|+||
T Consensus 81 ~~~~~lv~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~i~H~dl~~~nil~~~~--~~~~l~df 158 (269)
T cd08528 81 NDRLYIVMDLIEGAPLGEHFNSLKEKKQRFTEERIWNIFVQMVLALRYLHKEKRIVHRDLTPNNIMLGED--DKVTITDF 158 (269)
T ss_pred CCeEEEEEecCCCCcHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHhccCCceeecCCCHHHEEECCC--CcEEEecc
Confidence 4667899999999999876431 1 12344455555544444 677884 789999999999999865 89999999
Q ss_pred ccccccCHH
Q 002039 313 GLTKKLSSS 321 (977)
Q Consensus 313 G~~~~l~~~ 321 (977)
|++......
T Consensus 159 g~~~~~~~~ 167 (269)
T cd08528 159 GLAKQKQPE 167 (269)
T ss_pred cceeecccc
Confidence 999876543
No 374
>PTZ00266 NIMA-related protein kinase; Provisional
Probab=98.93 E-value=3.7e-09 Score=131.48 Aligned_cols=143 Identities=14% Similarity=0.082 Sum_probs=91.0
Q ss_pred cccccccccEEEEEEec-CCCEEEEEEecCCh-hhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCcHHH
Q 002039 124 TPLATASIAQVHRATLV-DGRQVVVKVQHQGI-KTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSE 201 (977)
Q Consensus 124 ~piasaSigqV~~A~l~-~G~~VAVKv~~p~i-~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~E 201 (977)
+.||.|+||.||+|+.+ +++.||+|+..... .... .-.|..|
T Consensus 19 ~kLG~GgFGtVYLAkdk~tg~~vAlKvIk~~~l~e~~------------------------------------~~~~~~E 62 (1021)
T PTZ00266 19 KKIGNGRFGEVFLVKHKRTQEFFCWKAISYRGLKERE------------------------------------KSQLVIE 62 (1021)
T ss_pred EEEecCCCeEEEEEEECCCCeEEEEEEEeccccCHHH------------------------------------HHHHHHH
Confidence 67999999999999974 68889999875321 1100 0013345
Q ss_pred HHHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeee---cCCceEEeeccCCCCCCChHHHH---hcCCCHHHHHHHHH
Q 002039 202 AENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ---SSETVLILEFMDGIRLNDCESLE---AFGVNKQKVVEEIT 275 (977)
Q Consensus 202 a~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~---~~~~vLVmE~i~G~~L~~~~~~~---~~~~~~~~l~~~l~ 275 (977)
+..+..+.+ ...+.+-..+. ....+|||||++|.+|.++.... ...++...+...+.
T Consensus 63 I~IL~~L~H-----------------PNIVrl~d~f~de~~~~lyIVMEY~~gGSL~~lL~k~~~~~g~L~E~~Il~Ia~ 125 (1021)
T PTZ00266 63 VNVMRELKH-----------------KNIVRYIDRFLNKANQKLYILMEFCDAGDLSRNIQKCYKMFGKIEEHAIVDITR 125 (1021)
T ss_pred HHHHHHcCC-----------------CCcCeEEEEEEecCCCEEEEEEeCCCCCcHHHHHHHHhhccCCCCHHHHHHHHH
Confidence 555544432 11122223222 12357999999999998764321 12355555555555
Q ss_pred HHH--HHHHHhc-------CccccCCCCCCeEEccC---------------CCCceEEEecccccccC
Q 002039 276 RAY--AHQIYVD-------GFFNGDPHPGNFLVSKD---------------PPHRPILLDFGLTKKLS 319 (977)
Q Consensus 276 ~~~--l~~i~~~-------G~~H~D~hPgNIlv~~~---------------~~g~i~LiDFG~~~~l~ 319 (977)
+++ +..+|.. +|+|+||||.||||+.+ ..+.++|+|||++..+.
T Consensus 126 QIL~ALaYLHs~g~~~~~k~IVHRDLKPeNILL~s~~~~lg~i~~~~~n~ng~~iVKLsDFGlAr~l~ 193 (1021)
T PTZ00266 126 QLLHALAYCHNLKDGPNGERVLHRDLKPQNIFLSTGIRHIGKITAQANNLNGRPIAKIGDFGLSKNIG 193 (1021)
T ss_pred HHHHHHHHHHhcccccccCCceeccCcHHHeEeecCccccccccccccccCCCCceEEccCCcccccc
Confidence 544 6778874 59999999999999642 12458999999987653
No 375
>cd05118 STKc_CMGC Catalytic domain of CMGC family Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They
Probab=98.93 E-value=2.8e-09 Score=116.90 Aligned_cols=144 Identities=17% Similarity=0.210 Sum_probs=90.5
Q ss_pred cccccccccEEEEEEec-CCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCcHHHH
Q 002039 124 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (977)
Q Consensus 124 ~piasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea 202 (977)
+.|++|++|.||+|+.. +|+.|++|..+......-. .-++.+|.
T Consensus 5 ~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~-----------------------------------~~~~~~e~ 49 (283)
T cd05118 5 GKIGEGTYGVVYKARDKLTGEIVAIKKIKLRFESEGI-----------------------------------PKTALREI 49 (283)
T ss_pred eeeecCCCceEEEEEcCCCCcEEEEEEeccccccchh-----------------------------------HHHHHHHH
Confidence 46899999999999974 7999999987654321100 00122233
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeee-cCCceEEeeccCCCCCCChHHHHhcCCCHHHHHHHHHHHH--H
Q 002039 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--A 279 (977)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~--l 279 (977)
..+.++.+ ..-+.+...+. ....++||||+++ ++.+........++...+...+.+++ +
T Consensus 50 ~~l~~l~~-----------------~~i~~~~~~~~~~~~~~~v~e~~~~-~l~~~l~~~~~~~~~~~~~~~~~~i~~~l 111 (283)
T cd05118 50 KLLKELNH-----------------PNIIKLLDVFRHKGDLYLVFEFMDT-DLYKLIKDRQRGLPESLIKSYLYQLLQGL 111 (283)
T ss_pred HHHHHhcC-----------------CCcchHHHhhccCCCEEEEEeccCC-CHHHHHHhhcccCCHHHHHHHHHHHHHHH
Confidence 33333321 00111111121 3556899999987 55554322222445444444444433 6
Q ss_pred HHHHhcCccccCCCCCCeEEccCCCCceEEEecccccccCHHH
Q 002039 280 HQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSSSM 322 (977)
Q Consensus 280 ~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~~~ 322 (977)
..+|..|++|+|+||.||+++.+ +.++|+|||.+..+....
T Consensus 112 ~~LH~~~i~H~dl~p~nili~~~--~~~~l~df~~~~~~~~~~ 152 (283)
T cd05118 112 AFCHSHGILHRDLKPENLLINTE--GVLKLADFGLARSFGSPV 152 (283)
T ss_pred HHHHHCCeeecCcCHHHEEECCC--CcEEEeeeeeeEecCCCc
Confidence 78999999999999999999865 889999999988776543
No 376
>cd05576 STKc_RPK118_like Catalytic domain of the Protein Serine/Threonine Kinases, RPK118 and similar proteins. Serine/Threonine Kinases (STKs), RPK118-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RPK118-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily show similarity to human RPK118, which contains an N-terminal Phox homology (PX) domain, a Microtubule Interacting and Trafficking (MIT) domain, and a kinase domain containing a long insert. Also included in the family is human RPK60 (or ribosomal protein S6 kinase-like 1), which also contains MIT and kinase domains but lacks a PX domain. RPK118 binds sphingosine kinase, a key enzyme in the synthesis of sphingosine 1-phospha
Probab=98.93 E-value=3.4e-09 Score=113.80 Aligned_cols=77 Identities=17% Similarity=0.205 Sum_probs=58.9
Q ss_pred CCceEEeeccCCCCCCChHHHHhcCCCHHHHHHHHHHHH--HHHHHhcCccccCCCCCCeEEccCCCCceEEEecccccc
Q 002039 240 SETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKK 317 (977)
Q Consensus 240 ~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~ 317 (977)
...+|+|||++|.+|.+... ....++...+...+.+++ +..+|..|++|+|+||.||+++.+ +.++++|||....
T Consensus 58 ~~~~lv~e~~~~~~L~~~l~-~~~~l~~~~~~~~~~ql~~~l~~lH~~~i~H~dlkp~Nil~~~~--~~~~l~df~~~~~ 134 (237)
T cd05576 58 DSVFLVLQHAEGGKLWSHIS-KFLNIPEECVKRWAAEMVVALDALHREGIVCRDLNPNNILLDDR--GHIQLTYFSRWSE 134 (237)
T ss_pred CeEEEEEecCCCCCHHHHHH-HhcCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHEEEcCC--CCEEEecccchhc
Confidence 45689999999999977643 223455555555554444 778899999999999999999865 8899999998765
Q ss_pred cC
Q 002039 318 LS 319 (977)
Q Consensus 318 l~ 319 (977)
+.
T Consensus 135 ~~ 136 (237)
T cd05576 135 VE 136 (237)
T ss_pred cc
Confidence 53
No 377
>cd07849 STKc_ERK1_2_like Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Extracellular signal-regulated kinases 1 and 2 (ERK1/2) and Fus3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase
Probab=98.92 E-value=2.6e-09 Score=121.03 Aligned_cols=74 Identities=16% Similarity=0.297 Sum_probs=54.4
Q ss_pred CceEEeeccCCCCCCChHHHHhcCCCHHHHHHHHHHHH--HHHHHhcCccccCCCCCCeEEccCCCCceEEEeccccccc
Q 002039 241 ETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKL 318 (977)
Q Consensus 241 ~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l 318 (977)
..++||||+++ ++.+. +....++...+...+.+++ +..+|..|++|+|+||.||+++.+ +.++|+|||++...
T Consensus 82 ~~~lv~e~~~~-~l~~~--~~~~~l~~~~~~~i~~ql~~aL~~LH~~~ivH~dlkp~Nill~~~--~~~kl~dfg~~~~~ 156 (336)
T cd07849 82 DVYIVQELMET-DLYKL--IKTQHLSNDHIQYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTN--CDLKICDFGLARIA 156 (336)
T ss_pred eEEEEehhccc-CHHHH--HhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHEEECCC--CCEEECcccceeec
Confidence 45899999986 33332 2233445555544444443 788999999999999999999865 89999999998765
Q ss_pred C
Q 002039 319 S 319 (977)
Q Consensus 319 ~ 319 (977)
.
T Consensus 157 ~ 157 (336)
T cd07849 157 D 157 (336)
T ss_pred c
Confidence 4
No 378
>cd05074 PTKc_Tyro3 Catalytic domain of the Protein Tyrosine Kinase, Tyro3. Protein Tyrosine Kinase (PTK) family; Tyro3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyro3 (or Sky) is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Tyro3 is predominantly expressed in the central nervous system and the brain, and functions as a neurotrophic fac
Probab=98.92 E-value=4.6e-09 Score=114.79 Aligned_cols=75 Identities=21% Similarity=0.301 Sum_probs=54.8
Q ss_pred eEEeeccCCCCCCChHHHHhc-----CCCHHHHHHHHHHHH--HHHHHhcCccccCCCCCCeEEccCCCCceEEEecccc
Q 002039 243 VLILEFMDGIRLNDCESLEAF-----GVNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLT 315 (977)
Q Consensus 243 vLVmE~i~G~~L~~~~~~~~~-----~~~~~~l~~~l~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~ 315 (977)
++++||.++.+|.+....... ..+...+...+.++. +..+|..|++|+|+||.||+++.+ +.++|+|||.+
T Consensus 83 ~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~i~H~dikp~nili~~~--~~~kl~dfg~~ 160 (273)
T cd05074 83 MVILPFMKHGDLHTFLLMSRIGEEPFTLPLQTLVRFMIDIASGMEYLSSKNFIHRDLAARNCMLNEN--MTVCVADFGLS 160 (273)
T ss_pred EEEEecCCCCcHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCEeecccchhhEEEcCC--CCEEECccccc
Confidence 688999999888765432211 133444444444433 678899999999999999999855 88999999998
Q ss_pred cccC
Q 002039 316 KKLS 319 (977)
Q Consensus 316 ~~l~ 319 (977)
..+.
T Consensus 161 ~~~~ 164 (273)
T cd05074 161 KKIY 164 (273)
T ss_pred cccc
Confidence 8663
No 379
>cd05044 PTKc_c-ros Catalytic domain of the Protein Tyrosine Kinase, C-ros. Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male
Probab=98.92 E-value=2.9e-09 Score=116.11 Aligned_cols=81 Identities=19% Similarity=0.177 Sum_probs=58.2
Q ss_pred cCCceEEeeccCCCCCCChHHHHh------cCCCHHHHHHHHHHHH--HHHHHhcCccccCCCCCCeEEccCC---CCce
Q 002039 239 SSETVLILEFMDGIRLNDCESLEA------FGVNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDP---PHRP 307 (977)
Q Consensus 239 ~~~~vLVmE~i~G~~L~~~~~~~~------~~~~~~~l~~~l~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~---~g~i 307 (977)
....++||||++|.+|.+...... ...+...+...+.++. +..+|..|++|+|+||.||+++.+. ...+
T Consensus 71 ~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~H~dl~p~nil~~~~~~~~~~~~ 150 (269)
T cd05044 71 NEPQYIIMELMEGGDLLSYLRDARVERFGPPLLTLKELLDICLDVAKGCVYLEQMHFIHRDLAARNCLVSEKGYDADRVV 150 (269)
T ss_pred CCCeEEEEeccCCCcHHHHHHHhhhcccCCccccHHHHHHHHHHHHHHHHHHHhCCcccCCCChheEEEecCCCCCCcce
Confidence 455789999999999987643211 1133344444444443 6788999999999999999998651 1279
Q ss_pred EEEecccccccC
Q 002039 308 ILLDFGLTKKLS 319 (977)
Q Consensus 308 ~LiDFG~~~~l~ 319 (977)
+|+|||++..+.
T Consensus 151 ~l~dfg~~~~~~ 162 (269)
T cd05044 151 KIGDFGLARDIY 162 (269)
T ss_pred EECCcccccccc
Confidence 999999987664
No 380
>cd08530 STKc_CNK2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains. Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, an
Probab=98.91 E-value=4.1e-09 Score=113.74 Aligned_cols=80 Identities=14% Similarity=0.175 Sum_probs=60.0
Q ss_pred cCCceEEeeccCCCCCCChHHHH---hcCCCHHHHHHHHHHHH--HHHHHhcCccccCCCCCCeEEccCCCCceEEEecc
Q 002039 239 SSETVLILEFMDGIRLNDCESLE---AFGVNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFG 313 (977)
Q Consensus 239 ~~~~vLVmE~i~G~~L~~~~~~~---~~~~~~~~l~~~l~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG 313 (977)
....++||||++|.+|.+..... ....+...+...+.+++ +..+|..|++|+|++|.||+++.+ ++++|+|||
T Consensus 71 ~~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lh~~~i~h~~l~~~ni~~~~~--~~~kl~d~g 148 (256)
T cd08530 71 GNKLCIVMEYAPFGDLSKAISKRKKKRKLIPEQEIWRIFIQLLRGLQALHEQKILHRDLKSANILLVAN--DLVKIGDLG 148 (256)
T ss_pred CCEEEEEehhcCCCCHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCcceEEEecC--CcEEEeecc
Confidence 35568999999999988764321 12345555555444433 678899999999999999999965 889999999
Q ss_pred cccccCH
Q 002039 314 LTKKLSS 320 (977)
Q Consensus 314 ~~~~l~~ 320 (977)
++..+..
T Consensus 149 ~~~~~~~ 155 (256)
T cd08530 149 ISKVLKK 155 (256)
T ss_pred chhhhcc
Confidence 9876644
No 381
>cd08218 STKc_Nek1 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 1. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 1 (Nek1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek1 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek1 is associated with centrosomes throughout the cell cycle. It is involved in the formation of primary cilium and in the maintenance of centrosomes. It cycles through the nucleus and may be capable of relaying signals between the cilium and the nucleus. Nek1 is implicated in the development of polycysti
Probab=98.91 E-value=6.1e-09 Score=112.66 Aligned_cols=142 Identities=15% Similarity=0.184 Sum_probs=92.1
Q ss_pred cccccccccEEEEEEe-cCCCEEEEEEecCC-hhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCcHHH
Q 002039 124 TPLATASIAQVHRATL-VDGRQVVVKVQHQG-IKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSE 201 (977)
Q Consensus 124 ~piasaSigqV~~A~l-~~G~~VAVKv~~p~-i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~E 201 (977)
+.+|+|++|.||+++. .+|+.||||..... ...... -++.+|
T Consensus 6 ~~lg~g~~g~~~~~~~~~~~~~~~ik~~~~~~~~~~~~------------------------------------~~~~~e 49 (256)
T cd08218 6 KKIGEGSFGKAILVKSKEDGKQYVIKEINISKMSPKER------------------------------------EESRKE 49 (256)
T ss_pred EEeccCCceEEEEEEEcCCCCEEEEEEEEhHhCChHHH------------------------------------HHHHHH
Confidence 5799999999999997 47899999975421 100000 012334
Q ss_pred HHHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeee-cCCceEEeeccCCCCCCChHHHHh-cCCCHHHHHHHHHHHH-
Q 002039 202 AENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLEA-FGVNKQKVVEEITRAY- 278 (977)
Q Consensus 202 a~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLVmE~i~G~~L~~~~~~~~-~~~~~~~l~~~l~~~~- 278 (977)
...+.++.+ ..-+.+...+. ....+|||||++|.+|.+...... ...+...+...+.++.
T Consensus 50 ~~~l~~l~~-----------------~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~ 112 (256)
T cd08218 50 VAVLSNMKH-----------------PNIVQYQESFEENGNLYIVMDYCEGGDLYKKINAQRGVLFPEDQILDWFVQICL 112 (256)
T ss_pred HHHHHhCCC-----------------CCeeeeEeeecCCCeEEEEEecCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHH
Confidence 333333321 00112222222 456789999999999876643221 1344455555444444
Q ss_pred -HHHHHhcCccccCCCCCCeEEccCCCCceEEEecccccccCH
Q 002039 279 -AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 320 (977)
Q Consensus 279 -l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 320 (977)
+..+|..|++|+|++|.||+++.+ +.++|+|||++..+..
T Consensus 113 ~l~~lh~~~i~h~~l~~~nil~~~~--~~~~l~d~~~~~~~~~ 153 (256)
T cd08218 113 ALKHVHDRKILHRDIKSQNIFLTKD--GTIKLGDFGIARVLNS 153 (256)
T ss_pred HHHHHHhCCEecCCCCHHHEEEcCC--CCEEEeeccceeecCc
Confidence 678899999999999999999865 7899999999987754
No 382
>cd07842 STKc_CDK8_like Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the
Probab=98.91 E-value=3.6e-09 Score=118.25 Aligned_cols=145 Identities=17% Similarity=0.183 Sum_probs=88.1
Q ss_pred cccccccccEEEEEEec---CCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCcHH
Q 002039 124 TPLATASIAQVHRATLV---DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNS 200 (977)
Q Consensus 124 ~piasaSigqV~~A~l~---~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~ 200 (977)
+.||+|++|.||+|+.+ +|+.||||+.++..... ..+.. .+.+
T Consensus 6 ~~ig~g~~g~v~~~~~~~~~~~~~~alK~~~~~~~~~------------------------~~~~~----------~~~~ 51 (316)
T cd07842 6 GCIGRGTYGRVYKAKRKNGKDGKEYAIKKFKGDKEQY------------------------TGISQ----------SACR 51 (316)
T ss_pred EEeccCCcEEEEEEEecCCCCCCeEEEEEeccccccc------------------------cCccH----------HHHH
Confidence 45999999999999974 58999999887643100 00000 1223
Q ss_pred HHHHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeee-c--CCceEEeeccCCCCCCChHHH-Hh---cCCCHHHHHHH
Q 002039 201 EAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-S--SETVLILEFMDGIRLNDCESL-EA---FGVNKQKVVEE 273 (977)
Q Consensus 201 Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~--~~~vLVmE~i~G~~L~~~~~~-~~---~~~~~~~l~~~ 273 (977)
|+.-+.++.+ ...+.+...+. . ...+|||||+++. +.+.... .. ..+....+...
T Consensus 52 e~~~l~~l~h-----------------~~i~~~~~~~~~~~~~~~~lv~e~~~~~-l~~~~~~~~~~~~~~~~~~~~~~i 113 (316)
T cd07842 52 EIALLRELKH-----------------ENVVSLVEVFLEHADKSVYLLFDYAEHD-LWQIIKFHRQAKRVSIPPSMVKSL 113 (316)
T ss_pred HHHHHHhcCC-----------------CCccceEEEEeCCCCceEEEEEeCCCcC-HHHHHHhhccCCCcCcCHHHHHHH
Confidence 4443333321 11122333332 2 4468999999863 3332211 11 12334444444
Q ss_pred HHHHH--HHHHHhcCccccCCCCCCeEEccC--CCCceEEEecccccccCH
Q 002039 274 ITRAY--AHQIYVDGFFNGDPHPGNFLVSKD--PPHRPILLDFGLTKKLSS 320 (977)
Q Consensus 274 l~~~~--l~~i~~~G~~H~D~hPgNIlv~~~--~~g~i~LiDFG~~~~l~~ 320 (977)
+.+++ +..+|..|++|+|++|.||+++.+ .++.++|+|||++..+..
T Consensus 114 ~~qi~~~l~~lH~~~i~h~dlkp~Nil~~~~~~~~~~~kl~Dfg~~~~~~~ 164 (316)
T cd07842 114 LWQILNGVHYLHSNWVLHRDLKPANILVMGEGPERGVVKIGDLGLARLFNA 164 (316)
T ss_pred HHHHHHHHHHHHhCCEeeCCCCHHHEEEcCCCCccceEEECCCccccccCC
Confidence 44433 778899999999999999999861 138899999999886643
No 383
>cd07829 STKc_CDK_like Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the
Probab=98.90 E-value=6.4e-09 Score=114.02 Aligned_cols=78 Identities=18% Similarity=0.243 Sum_probs=58.1
Q ss_pred CCceEEeeccCCCCCCChHHHHhcCCCHHHHHHHHHHHH--HHHHHhcCccccCCCCCCeEEccCCCCceEEEecccccc
Q 002039 240 SETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKK 317 (977)
Q Consensus 240 ~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~ 317 (977)
...++||||+++ +|.++........+...+...+.+++ +..+|..|++|+|++|.||+++.+ +.++|+|||.+..
T Consensus 71 ~~~~~v~e~~~~-~l~~~i~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~~l~~~ni~~~~~--~~~~l~d~g~~~~ 147 (282)
T cd07829 71 RKLYLVFEYCDM-DLKKYLDKRPGPLSPNLIKSIMYQLLRGLAYCHSHRILHRDLKPQNILINRD--GVLKLADFGLARA 147 (282)
T ss_pred CceEEEecCcCc-CHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCChheEEEcCC--CCEEEecCCcccc
Confidence 456899999986 67665432212455555555444443 788999999999999999999865 8999999999877
Q ss_pred cCH
Q 002039 318 LSS 320 (977)
Q Consensus 318 l~~ 320 (977)
+..
T Consensus 148 ~~~ 150 (282)
T cd07829 148 FGI 150 (282)
T ss_pred cCC
Confidence 643
No 384
>cd07856 STKc_Sty1_Hog1 Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1. Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and U
Probab=98.90 E-value=5.4e-09 Score=118.14 Aligned_cols=140 Identities=16% Similarity=0.195 Sum_probs=88.6
Q ss_pred ccccccccccEEEEEEec-CCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCcHHH
Q 002039 123 ETPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSE 201 (977)
Q Consensus 123 ~~piasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~E 201 (977)
.+.||.|++|.||+|+.+ +|+.||||+......... ..-++..|
T Consensus 15 ~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~-----------------------------------~~~~~~~E 59 (328)
T cd07856 15 LQPVGMGAFGLVCSARDQLTGQNVAIKKIMKPFSTPV-----------------------------------LAKRTYRE 59 (328)
T ss_pred EEeecccCCeEEEEEEECCCCCEEEEEEecccccccc-----------------------------------hhHHHHHH
Confidence 378999999999999864 899999997643211000 00123334
Q ss_pred HHHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeee--cCCceEEeeccCCCCCCChHHHHhcCCCHHHHHHHHHHHH-
Q 002039 202 AENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ--SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY- 278 (977)
Q Consensus 202 a~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~--~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~- 278 (977)
...+.++.+ ...+.+...+. ....+++|||+.+ +|.++. .........+...+.+++
T Consensus 60 ~~~l~~l~h-----------------pniv~~~~~~~~~~~~~~lv~e~~~~-~L~~~~--~~~~~~~~~~~~~~~ql~~ 119 (328)
T cd07856 60 LKLLKHLRH-----------------ENIISLSDIFISPLEDIYFVTELLGT-DLHRLL--TSRPLEKQFIQYFLYQILR 119 (328)
T ss_pred HHHHHhcCC-----------------CCeeeEeeeEecCCCcEEEEeehhcc-CHHHHH--hcCCCCHHHHHHHHHHHHH
Confidence 444444322 11233344433 3456899999954 555442 222334333333333332
Q ss_pred -HHHHHhcCccccCCCCCCeEEccCCCCceEEEecccccccC
Q 002039 279 -AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 319 (977)
Q Consensus 279 -l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~ 319 (977)
+..+|..|++|+|++|.||+++.+ +.++|+|||++....
T Consensus 120 aL~~LH~~~iiH~dl~p~Nili~~~--~~~~l~dfg~~~~~~ 159 (328)
T cd07856 120 GLKYVHSAGVVHRDLKPSNILINEN--CDLKICDFGLARIQD 159 (328)
T ss_pred HHHHHHhCCcccCCCCHHHEeECCC--CCEEeCccccccccC
Confidence 678999999999999999999855 889999999987654
No 385
>PHA02882 putative serine/threonine kinase; Provisional
Probab=98.90 E-value=7e-09 Score=115.27 Aligned_cols=74 Identities=19% Similarity=0.301 Sum_probs=49.2
Q ss_pred ceEEeeccCCCCCCChHHHHhcCCCHHHHHHHHHHHH--HHHHHhcCccccCCCCCCeEEccCCCCceEEEecccccccC
Q 002039 242 TVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 319 (977)
Q Consensus 242 ~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~ 319 (977)
.+++||++.. ++.+.... ........+...+.++. +..+|..|++|||+||.|||++.+ +.++|+|||+++.+.
T Consensus 102 ~~~~~~~~~~-~~~~~~~~-~~~~~~~~~~~i~~qi~~~l~~lH~~~iiHrDiKp~Nill~~~--~~~~l~DFGla~~~~ 177 (294)
T PHA02882 102 RFILLEKLVE-NTKEIFKR-IKCKNKKLIKNIMKDMLTTLEYIHEHGISHGDIKPENIMVDGN--NRGYIIDYGIASHFI 177 (294)
T ss_pred EEEEEehhcc-CHHHHHHh-hccCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCC--CcEEEEEcCCceeec
Confidence 3678887643 33222111 11123333333333333 778999999999999999999855 889999999998764
No 386
>cd07854 STKc_MAPK4_6 Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 and 6. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 4 (MAPK4) and MAPK6 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK4/6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. MAPK4 is also called ERK4 or p63MAPK, while MAPK6 is also called ERK3 or p97MAPK. MAPK4 and MAPK6 are atypical MAPKs that are not regulated by MAP2Ks. MAPK6 is expressed ubiquitously with highest amounts in brain and skeletal muscle. It may be involved in the control of cell differentiation by negatively regulating cell cycle progressi
Probab=98.89 E-value=3.6e-09 Score=120.23 Aligned_cols=74 Identities=18% Similarity=0.283 Sum_probs=53.0
Q ss_pred ceEEeeccCCCCCCChHHHHhcCCCHHHHHHHHHHHH--HHHHHhcCccccCCCCCCeEEccCCCCceEEEecccccccC
Q 002039 242 TVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 319 (977)
Q Consensus 242 ~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~ 319 (977)
.++||||+++ +|.+. +....+....+...+.+++ +..+|..|++|+|+||+||+++.+ ++.++|+|||++..+.
T Consensus 91 ~~lv~e~~~~-~L~~~--~~~~~l~~~~~~~~~~qi~~aL~~LH~~givH~dikp~Nili~~~-~~~~kl~dfg~~~~~~ 166 (342)
T cd07854 91 VYIVQEYMET-DLANV--LEQGPLSEEHARLFMYQLLRGLKYIHSANVLHRDLKPANVFINTE-DLVLKIGDFGLARIVD 166 (342)
T ss_pred EEEEeecccc-cHHHH--HHcCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEEcCC-CceEEECCcccceecC
Confidence 4799999985 55443 2222344444444444433 778899999999999999999754 3678999999987664
No 387
>KOG3653 consensus Transforming growth factor beta/activin receptor subfamily of serine/threonine kinases [Signal transduction mechanisms]
Probab=98.89 E-value=4e-09 Score=117.47 Aligned_cols=141 Identities=22% Similarity=0.200 Sum_probs=94.0
Q ss_pred cccccccccEEEEEEecCCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCcHHHHH
Q 002039 124 TPLATASIAQVHRATLVDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEAE 203 (977)
Q Consensus 124 ~piasaSigqV~~A~l~~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea~ 203 (977)
+-+|+|.||.||+|.+ +++.|||||..+.-.+.+.++-++.+. | ..+-.
T Consensus 216 eli~~Grfg~V~KaqL-~~~~VAVKifp~~~kqs~~~Ek~Iy~l---------p---------------------~m~h~ 264 (534)
T KOG3653|consen 216 ELIGRGRFGCVWKAQL-DNRLVAVKIFPEQEKQSFQNEKNIYSL---------P---------------------GMKHE 264 (534)
T ss_pred HHhhcCccceeehhhc-cCceeEEEecCHHHHHHHHhHHHHHhc---------c---------------------Cccch
Confidence 4589999999999998 569999999876655555444332211 1 11223
Q ss_pred HHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeeecCCceEEeeccCCCCCCChHHHHhcCCCHH---HHHHHHHHHHHH
Q 002039 204 NTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQSSETVLILEFMDGIRLNDCESLEAFGVNKQ---KVVEEITRAYAH 280 (977)
Q Consensus 204 n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~---~l~~~l~~~~l~ 280 (977)
|+.+|-..=+. .+.. ..+.+||+||-+-++|.++. ...-++-. ++++.+++- +.
T Consensus 265 nIl~Fi~~ekr------------------~t~~--~~eywLVt~fh~kGsL~dyL--~~ntisw~~~cria~SmarG-La 321 (534)
T KOG3653|consen 265 NILQFIGAEKR------------------GTAD--RMEYWLVTEFHPKGSLCDYL--KANTISWNSLCRIAESMARG-LA 321 (534)
T ss_pred hHHHhhchhcc------------------CCcc--ccceeEEeeeccCCcHHHHH--HhccccHHHHHHHHHHHHHH-HH
Confidence 55555321110 0000 12457999999999999884 44445543 344444443 44
Q ss_pred HHHh---------cCccccCCCCCCeEEccCCCCceEEEecccccccCH
Q 002039 281 QIYV---------DGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 320 (977)
Q Consensus 281 ~i~~---------~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 320 (977)
.+|+ -+|.|||+|..||||..| ++-+|.|||++.++++
T Consensus 322 ~LHee~p~~d~~Kp~IaHRDlkSkNVLvK~D--lTccIaDFGLAl~~~p 368 (534)
T KOG3653|consen 322 HLHEELPRGDHHKPPIAHRDLKSKNVLVKND--LTCCIADFGLALRLEP 368 (534)
T ss_pred HhcccCCcCCCCCCccccccccccceEEccC--CcEEeeccceeEEecC
Confidence 5664 579999999999999866 9999999999998874
No 388
>KOG0669 consensus Cyclin T-dependent kinase CDK9 [Cell cycle control, cell division, chromosome partitioning]
Probab=98.89 E-value=3.1e-10 Score=116.59 Aligned_cols=74 Identities=22% Similarity=0.324 Sum_probs=51.7
Q ss_pred CceEEeeccCCCCCCChHHHH---hcCCCHHHHHHHHHHHH--HHHHHhcCccccCCCCCCeEEccCCCCceEEEecccc
Q 002039 241 ETVLILEFMDGIRLNDCESLE---AFGVNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLT 315 (977)
Q Consensus 241 ~~vLVmE~i~G~~L~~~~~~~---~~~~~~~~l~~~l~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~ 315 (977)
.-+|||.+|+ .|+..+- ...+....|-..+-.+. +..||+..++|||+||.|+||+.+ |.++|.|||++
T Consensus 98 t~ylVf~~ce----hDLaGlLsn~~vr~sls~Ikk~Mk~Lm~GL~~iHr~kilHRDmKaaNvLIt~d--gilklADFGla 171 (376)
T KOG0669|consen 98 TFYLVFDFCE----HDLAGLLSNRKVRFSLSEIKKVMKGLMNGLYYIHRNKILHRDMKAANVLITKD--GILKLADFGLA 171 (376)
T ss_pred eeeeeHHHhh----hhHHHHhcCccccccHHHHHHHHHHHHHHHHHHHHhhHHhhcccHhhEEEcCC--ceEEeeccccc
Confidence 3579999997 3332221 11233333333222222 778999999999999999999966 89999999999
Q ss_pred cccCH
Q 002039 316 KKLSS 320 (977)
Q Consensus 316 ~~l~~ 320 (977)
+.++.
T Consensus 172 r~fs~ 176 (376)
T KOG0669|consen 172 RAFST 176 (376)
T ss_pred cceec
Confidence 87764
No 389
>PHA03210 serine/threonine kinase US3; Provisional
Probab=98.88 E-value=2.4e-09 Score=128.04 Aligned_cols=79 Identities=19% Similarity=0.147 Sum_probs=51.9
Q ss_pred cCCceEEeeccCCCCCCChHHHHhc----CCCHHHHHHHHHHHH--HHHHHhcCccccCCCCCCeEEccCCCCceEEEec
Q 002039 239 SSETVLILEFMDGIRLNDCESLEAF----GVNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDF 312 (977)
Q Consensus 239 ~~~~vLVmE~i~G~~L~~~~~~~~~----~~~~~~l~~~l~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDF 312 (977)
....++|||++.+. +.+....... ......+...+.+++ +..+|..||+|||+||.|||++.+ +.++|+||
T Consensus 235 ~~~~~lv~e~~~~~-l~~~l~~~~~~~~~~~~~~~~~~i~~ql~~aL~yLH~~gIiHrDLKP~NILl~~~--~~vkL~DF 311 (501)
T PHA03210 235 EANTYMITQKYDFD-LYSFMYDEAFDWKDRPLLKQTRAIMKQLLCAVEYIHDKKLIHRDIKLENIFLNCD--GKIVLGDF 311 (501)
T ss_pred CCeeEEEEeccccC-HHHHHhhccccccccccHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECCC--CCEEEEeC
Confidence 45568999998653 3222110000 011222222333332 788999999999999999999865 89999999
Q ss_pred ccccccCH
Q 002039 313 GLTKKLSS 320 (977)
Q Consensus 313 G~~~~l~~ 320 (977)
|++..+..
T Consensus 312 Gla~~~~~ 319 (501)
T PHA03210 312 GTAMPFEK 319 (501)
T ss_pred CCceecCc
Confidence 99987754
No 390
>cd05043 PTK_Ryk Pseudokinase domain of Ryk (Receptor related to tyrosine kinase). Protein Tyrosine Kinase (PTK) family; Receptor related to tyrosine kinase (Ryk); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ryk is a receptor tyr kinase (RTK) containing an extracellular region with two leucine-rich motifs, a transmembrane segment, and an intracellular inactive pseudokinase domain. The extracellular region of Ryk shows homology to the N-terminal domain of Wnt inhibitory factor-1 (WIF) and serves as the ligand (Wnt) binding domain of Ryk. Ryk is expressed in many different tissues both during development and in adults, suggesting a widespread function. It
Probab=98.88 E-value=9.9e-09 Score=112.75 Aligned_cols=138 Identities=14% Similarity=0.128 Sum_probs=92.7
Q ss_pred cccccccccEEEEEEecC-----CCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCc
Q 002039 124 TPLATASIAQVHRATLVD-----GRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDF 198 (977)
Q Consensus 124 ~piasaSigqV~~A~l~~-----G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~ 198 (977)
+-||.|++|.||+|...+ ++.|++|+......... .-.+
T Consensus 12 ~~i~~g~~g~V~~~~~~~~~~~~~~~v~~k~~~~~~~~~~------------------------------------~~~~ 55 (280)
T cd05043 12 DLLQEGTFGRIFYGILIDEKPGKEEEVFVKTVKDHASEIQ------------------------------------VTLL 55 (280)
T ss_pred eeecccCCceEEEEEEecCCCCceeEEEEEEccCCCCHHH------------------------------------HHHH
Confidence 568999999999999865 78899998654322110 0023
Q ss_pred HHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeee-----cCCceEEeeccCCCCCCChHHHHh-------cCCC
Q 002039 199 NSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-----SSETVLILEFMDGIRLNDCESLEA-------FGVN 266 (977)
Q Consensus 199 ~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-----~~~~vLVmE~i~G~~L~~~~~~~~-------~~~~ 266 (977)
.+|+..+.++.+ ..+.+++. ....++++||+++.+|.+...... ..+.
T Consensus 56 ~~e~~~l~~l~h--------------------~ni~~~~~~~~~~~~~~~~~~~~~~~~~L~~~l~~~~~~~~~~~~~l~ 115 (280)
T cd05043 56 LQESCLLYGLSH--------------------QNILPILHVCIEDGEPPFVLYPYMNWGNLKLFLQQCRLGEANNPQALS 115 (280)
T ss_pred HHHHHHHHhCCC--------------------CCCCeEEEEEecCCCCCEEEEEcCCCCcHHHHHHhccccccccccCCC
Confidence 345444444321 11222221 245689999999999887643221 1244
Q ss_pred HHHHHHHHHHHH--HHHHHhcCccccCCCCCCeEEccCCCCceEEEecccccccC
Q 002039 267 KQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 319 (977)
Q Consensus 267 ~~~l~~~l~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~ 319 (977)
...+...+.++. +..+|..|++|+|++|.||+++.+ +.++|+|||+++.+.
T Consensus 116 ~~~~~~i~~~i~~~l~~LH~~~i~H~di~p~nil~~~~--~~~kl~d~g~~~~~~ 168 (280)
T cd05043 116 TQQLVHMAIQIACGMSYLHKRGVIHKDIAARNCVIDEE--LQVKITDNALSRDLF 168 (280)
T ss_pred HHHHHHHHHHHHHHHHHHHHCCEeecccCHhhEEEcCC--CcEEECCCCCccccc
Confidence 555555554444 788999999999999999999865 899999999988664
No 391
>cd07838 STKc_CDK4_6_like Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both
Probab=98.87 E-value=1.3e-08 Score=111.94 Aligned_cols=145 Identities=19% Similarity=0.184 Sum_probs=90.3
Q ss_pred cccccccccEEEEEEec-CCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCcHHHH
Q 002039 124 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (977)
Q Consensus 124 ~piasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea 202 (977)
+.||.|++|.||+|+.+ +|+.||||+.+......- ...++.+|.
T Consensus 5 ~~l~~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~-----------------------------------~~~~~~~e~ 49 (287)
T cd07838 5 AEIGEGAYGTVYKARDLNTGRFVALKKVRVPLSEEG-----------------------------------IPLSTLREI 49 (287)
T ss_pred EEecccCceEEEEEEECCCCCEEEEEEeccccccch-----------------------------------hhhhHHHHH
Confidence 46899999999999986 599999998764322100 000122333
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeee-c-----CCceEEeeccCCCCCCChHHHHh-cCCCHHHHHHHHH
Q 002039 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-S-----SETVLILEFMDGIRLNDCESLEA-FGVNKQKVVEEIT 275 (977)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~-----~~~vLVmE~i~G~~L~~~~~~~~-~~~~~~~l~~~l~ 275 (977)
..+.+++.. . ...-+.+-..+. . ...+++|||+++ ++.+...... ..++...+...+.
T Consensus 50 ~~l~~l~~~-~-------------h~~i~~~~~~~~~~~~~~~~~~~l~~e~~~~-~l~~~l~~~~~~~l~~~~~~~~~~ 114 (287)
T cd07838 50 ALLKQLESF-E-------------HPNIVRLLDVCHGPRTDRELKLTLVFEHVDQ-DLATYLSKCPKPGLPPETIKDLMR 114 (287)
T ss_pred HHHHHhhcc-C-------------CCCcceEEEEEeeccCCCCceeEEEehhccc-CHHHHHHHccCCCCCHHHHHHHHH
Confidence 333333210 0 000112222222 1 226899999986 5655432211 2345555555555
Q ss_pred HHH--HHHHHhcCccccCCCCCCeEEccCCCCceEEEecccccccCH
Q 002039 276 RAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 320 (977)
Q Consensus 276 ~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 320 (977)
+++ +..+|..|++|+|++|.||+++.+ +.++|+|||.+..++.
T Consensus 115 ~i~~al~~LH~~~i~h~~l~~~nili~~~--~~~~l~dfg~~~~~~~ 159 (287)
T cd07838 115 QLLRGVDFLHSHRIVHRDLKPQNILVTSD--GQVKIADFGLARIYSF 159 (287)
T ss_pred HHHHHHHHHHHCCeeeccCChhhEEEccC--CCEEEeccCcceeccC
Confidence 544 788999999999999999999965 8999999999877643
No 392
>cd07855 STKc_ERK5 Catalytic domain of the Serine/Threonine Kinase, Extracellular signal-Regulated Kinase 5. Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the
Probab=98.87 E-value=3e-09 Score=120.48 Aligned_cols=75 Identities=19% Similarity=0.326 Sum_probs=54.3
Q ss_pred CceEEeeccCCCCCCChHHHHhcCCCHHHHHHHHHHHH--HHHHHhcCccccCCCCCCeEEccCCCCceEEEeccccccc
Q 002039 241 ETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKL 318 (977)
Q Consensus 241 ~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l 318 (977)
..++||||+.| +|.+... ....++...+...+.++. +..+|..|++|+|+||.||+++.+ +.++|+|||++..+
T Consensus 82 ~~~lv~e~~~~-~l~~~~~-~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~Nil~~~~--~~~kl~dfg~~~~~ 157 (334)
T cd07855 82 DVYVVMDLMES-DLHHIIH-SDQPLTEEHIRYFLYQLLRGLKYIHSANVIHRDLKPSNLLVNED--CELRIGDFGMARGL 157 (334)
T ss_pred eEEEEEehhhh-hHHHHhc-cCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEcCC--CcEEecccccceee
Confidence 45799999976 5544422 122344444444444433 778899999999999999999865 89999999998765
Q ss_pred C
Q 002039 319 S 319 (977)
Q Consensus 319 ~ 319 (977)
.
T Consensus 158 ~ 158 (334)
T cd07855 158 S 158 (334)
T ss_pred c
Confidence 4
No 393
>cd07857 STKc_MPK1 Catalytic domain of the Serine/Threonine Kinase, Fungal Mitogen-Activated Protein Kinase MPK1. Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) MPK1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MPK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs MPK1 from Saccharomyces cerevisiae, Pmk1 from Schizosaccharomyces pombe, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. MPK1 (also called Slt2) and Pmk1 (also called Spm1) are stress-activated MAPKs that regulate the cell wall integrity (CWI) pathway, and are therefore important in the maintainance of cell shape, cell wall co
Probab=98.87 E-value=6.5e-09 Score=117.60 Aligned_cols=76 Identities=25% Similarity=0.332 Sum_probs=56.2
Q ss_pred CceEEeeccCCCCCCChHHHHhcCCCHHHHHHHHHHHH--HHHHHhcCccccCCCCCCeEEccCCCCceEEEeccccccc
Q 002039 241 ETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKL 318 (977)
Q Consensus 241 ~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l 318 (977)
..+++|||+++ +|.+... ....++...+...+.+++ +..+|..|++|+|+||+|||++.+ +.++|+|||++..+
T Consensus 80 ~~~~~~e~~~~-~L~~~l~-~~~~~~~~~~~~~~~qi~~aL~~LH~~givH~dlkp~Nili~~~--~~~kl~Dfg~a~~~ 155 (332)
T cd07857 80 ELYLYEELMEA-DLHQIIR-SGQPLTDAHFQSFIYQILCGLKYIHSANVLHRDLKPGNLLVNAD--CELKICDFGLARGF 155 (332)
T ss_pred cEEEEEecccC-CHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHeEEcCC--CCEEeCcCCCceec
Confidence 35789999875 5544421 223455555555555544 788999999999999999999865 88999999999876
Q ss_pred CH
Q 002039 319 SS 320 (977)
Q Consensus 319 ~~ 320 (977)
..
T Consensus 156 ~~ 157 (332)
T cd07857 156 SE 157 (332)
T ss_pred cc
Confidence 53
No 394
>cd06616 PKc_MKK4 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 4. Protein kinases (PKs), MAP kinase kinase 4 (MKK4) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK4 is a dual-specificity PK that phosphorylates and activates
Probab=98.87 E-value=1e-08 Score=113.07 Aligned_cols=137 Identities=14% Similarity=0.151 Sum_probs=86.0
Q ss_pred cccccccccEEEEEEec-CCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCcHHHH
Q 002039 124 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (977)
Q Consensus 124 ~piasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea 202 (977)
+.||.|++|.||+++.. +|+.||||..+...... .+.++.+|.
T Consensus 10 ~~lg~G~~g~vy~~~~~~~~~~~aiK~~~~~~~~~------------------------------------~~~~~~~e~ 53 (288)
T cd06616 10 GEIGRGAFGTVNKMLHKPSGTIMAVKRIRSTVDEK------------------------------------EQKRLLMDL 53 (288)
T ss_pred HHhCCCCceEEEEEEECCCCCEEEEEEehhccChH------------------------------------HHHHHHHHH
Confidence 56899999999999974 78999999765322110 011233444
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceee---e-cCCceEEeeccCCCCCCChHHH----HhcCCCHHHHHHHH
Q 002039 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVI---Q-SSETVLILEFMDGIRLNDCESL----EAFGVNKQKVVEEI 274 (977)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~---~-~~~~vLVmE~i~G~~L~~~~~~----~~~~~~~~~l~~~l 274 (977)
..+.++.. + -.|++++ . ....+++|||+++ ++.++... ....+....+...+
T Consensus 54 ~~l~~~~~-----------------~--~~iv~~~~~~~~~~~~~~~~e~~~~-~l~~l~~~~~~~~~~~l~~~~~~~i~ 113 (288)
T cd06616 54 DVVMRSSD-----------------C--PYIVKFYGALFREGDCWICMELMDI-SLDKFYKYVYEVLKSVIPEEILGKIA 113 (288)
T ss_pred HHHHHhcC-----------------C--CCEeeeeeEEecCCcEEEEEecccC-CHHHHHHHHHHhhcCCCCHHHHHHHH
Confidence 44443321 1 1233332 2 4567899999874 44333211 11224444444444
Q ss_pred HHHH--HHHHHh-cCccccCCCCCCeEEccCCCCceEEEeccccccc
Q 002039 275 TRAY--AHQIYV-DGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKL 318 (977)
Q Consensus 275 ~~~~--l~~i~~-~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l 318 (977)
.++. ++.+|. .|++|+|+||.||+++.+ +.++|+|||++..+
T Consensus 114 ~~i~~~l~~lh~~~~i~H~dlkp~Nil~~~~--~~~kl~dfg~~~~~ 158 (288)
T cd06616 114 VATVKALNYLKEELKIIHRDVKPSNILLDRN--GNIKLCDFGISGQL 158 (288)
T ss_pred HHHHHHHHHHhhcCCeeccCCCHHHEEEccC--CcEEEeecchhHHh
Confidence 4433 677776 599999999999999865 88999999998655
No 395
>KOG0586 consensus Serine/threonine protein kinase [General function prediction only]
Probab=98.86 E-value=7.6e-09 Score=119.01 Aligned_cols=141 Identities=18% Similarity=0.253 Sum_probs=96.4
Q ss_pred cccccccccEEEEEEe-cCCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCcHHHH
Q 002039 124 TPLATASIAQVHRATL-VDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (977)
Q Consensus 124 ~piasaSigqV~~A~l-~~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea 202 (977)
.-||+|.||.|..|+. .+|.+||||+.....- |...++. +.+|.
T Consensus 62 ~tig~g~f~~V~La~~~~t~~~VaiK~idkt~l-----n~~~~~k------------------------------~~rev 106 (596)
T KOG0586|consen 62 KTIGKGNFAKVKLARHILTGTEVAIKIIDKTQL-----NPSKRQK------------------------------LGREV 106 (596)
T ss_pred eeeccceeEEEEeeEecCCCceEEEEEehhccc-----ChHHHHH------------------------------HHHHH
Confidence 5799999999999997 4899999998653211 1111111 12233
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeee-cCCceEEeeccCCCCCCChHHHHhcCCCHHHHHHHHHHHH---
Q 002039 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--- 278 (977)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~--- 278 (977)
+-+..+.| ...|.+-.++. ....||||||..|+.+.++ +...+.+.+..++..+.-.
T Consensus 107 ~imk~l~H-----------------PnIvkl~~v~~t~~~lylV~eya~~ge~~~y--l~~~gr~~e~~ar~~F~q~vsa 167 (596)
T KOG0586|consen 107 DIMKSLNH-----------------PNIVKLFSVIETEATLYLVMEYASGGELFDY--LVKHGRMKEKEARAKFRQIVSA 167 (596)
T ss_pred HHHHhcCC-----------------cceeeeeeeeeecceeEEEEEeccCchhHHH--HHhcccchhhhhhhhhHHHHHH
Confidence 33333321 11234444554 5667999999999888776 4455655554444443322
Q ss_pred HHHHHhcCccccCCCCCCeEEccCCCCceEEEecccccccCH
Q 002039 279 AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 320 (977)
Q Consensus 279 l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 320 (977)
++.+|.++|+|||||..|||++.+ ..|+|.|||+...++.
T Consensus 168 veYcH~k~ivHrdLk~eNilL~~~--mnikIaDfgfS~~~~~ 207 (596)
T KOG0586|consen 168 VEYCHSKNIVHRDLKAENILLDEN--MNIKIADFGFSTFFDY 207 (596)
T ss_pred HHHHhhcceeccccchhhcccccc--cceeeeccccceeecc
Confidence 788899999999999999999965 7799999999988864
No 396
>cd06618 PKc_MKK7 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 7. Protein kinases (PKs), MAP kinase kinase 7 (MKK7) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK7 is a dual-specificity PK that phosphorylates and activates it
Probab=98.86 E-value=9.6e-09 Score=114.05 Aligned_cols=79 Identities=19% Similarity=0.266 Sum_probs=54.3
Q ss_pred cCCceEEeeccCCCCCCChHHHHhcCCCHHHHHHHHHHHH--HHHHHh-cCccccCCCCCCeEEccCCCCceEEEecccc
Q 002039 239 SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--AHQIYV-DGFFNGDPHPGNFLVSKDPPHRPILLDFGLT 315 (977)
Q Consensus 239 ~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~--l~~i~~-~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~ 315 (977)
....+++|||+.+ .+.++.......++...+...+.+++ +..+|. .|++|+|++|.||+++.+ +.++|+|||++
T Consensus 86 ~~~~~~v~e~~~~-~l~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~i~H~dl~p~nill~~~--~~~kL~dfg~~ 162 (296)
T cd06618 86 DSDVFICMELMST-CLDKLLKRIQGPIPEDILGKMTVAIVKALHYLKEKHGVIHRDVKPSNILLDAS--GNVKLCDFGIS 162 (296)
T ss_pred CCeEEEEeeccCc-CHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhhCCEecCCCcHHHEEEcCC--CCEEECccccc
Confidence 3456899999965 44444322222344444444444433 667886 699999999999999855 89999999998
Q ss_pred cccCH
Q 002039 316 KKLSS 320 (977)
Q Consensus 316 ~~l~~ 320 (977)
..+..
T Consensus 163 ~~~~~ 167 (296)
T cd06618 163 GRLVD 167 (296)
T ss_pred hhccC
Confidence 76643
No 397
>KOG0599 consensus Phosphorylase kinase gamma subunit [Carbohydrate transport and metabolism]
Probab=98.85 E-value=4.3e-09 Score=109.38 Aligned_cols=158 Identities=16% Similarity=0.251 Sum_probs=100.2
Q ss_pred cccccCc-cccccccccEEEEEEe-cCCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhccc
Q 002039 117 MFMDFVE-TPLATASIAQVHRATL-VDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPK 194 (977)
Q Consensus 117 ~f~~~d~-~piasaSigqV~~A~l-~~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ 194 (977)
.|...++ +-+|.|..+.|.|+.. ++|.+.|+|+.--...... .+-..++.+...+
T Consensus 15 fy~~y~pkeilgrgvss~vrRci~k~t~~e~a~kii~~~at~~~-----------------------~e~~~~~~EaT~~ 71 (411)
T KOG0599|consen 15 FYAKYEPKEILGRGVSSVVRRCIHKETGKEFAVKIIDVTATTES-----------------------GETPYEMREATRQ 71 (411)
T ss_pred HHhhcChHHHhcccchhhhhhhhhcccccceeEEEEEecccccC-----------------------CccHHHHHHHHHH
Confidence 3444443 5688888889988886 4789999998642221110 0113333333333
Q ss_pred ccCcHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeee-cCCceEEeeccCCCCCCChHHHHhcCCCH---HHH
Q 002039 195 ELDFNSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAFGVNK---QKV 270 (977)
Q Consensus 195 Eld~~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLVmE~i~G~~L~~~~~~~~~~~~~---~~l 270 (977)
|++ .+++... ....+.+-.+|. ++--+||.|.++-+.|-|+.... --++. ..+
T Consensus 72 Ev~---------ILRqv~G-------------HP~II~l~D~yes~sF~FlVFdl~prGELFDyLts~-VtlSEK~tR~i 128 (411)
T KOG0599|consen 72 EIS---------ILRQVMG-------------HPYIIDLQDVYESDAFVFLVFDLMPRGELFDYLTSK-VTLSEKETRRI 128 (411)
T ss_pred HHH---------HHHHhcC-------------CCcEEEeeeeccCcchhhhhhhhcccchHHHHhhhh-eeecHHHHHHH
Confidence 332 2333222 122345556665 45567999999988887774321 11222 334
Q ss_pred HHHHHHHHHHHHHhcCccccCCCCCCeEEccCCCCceEEEecccccccCHHHH
Q 002039 271 VEEITRAYAHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSSSMK 323 (977)
Q Consensus 271 ~~~l~~~~l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~~~r 323 (977)
.+.+++. ...+|..+|+|||+||.|||++++ .+|+|.|||.++++.+..+
T Consensus 129 Mrqlfeg-VeylHa~~IVHRDLKpENILlddn--~~i~isDFGFa~~l~~Gek 178 (411)
T KOG0599|consen 129 MRQLFEG-VEYLHARNIVHRDLKPENILLDDN--MNIKISDFGFACQLEPGEK 178 (411)
T ss_pred HHHHHHH-HHHHHHhhhhhcccChhheeeccc--cceEEeccceeeccCCchh
Confidence 4444443 667899999999999999999965 8999999999999987543
No 398
>cd08226 PK_STRAD_beta Pseudokinase domain of STE20-related kinase adapter protein beta. Protein Kinase family, STE20-related kinase adapter protein (STRAD) beta subfamily, pseudokinase domain. The STRAD-beta subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpig
Probab=98.85 E-value=1e-08 Score=115.68 Aligned_cols=76 Identities=16% Similarity=0.088 Sum_probs=56.1
Q ss_pred cCCceEEeeccCCCCCCChHHHH-hcCCCHHHHHHHHHHHH--HHHHHhcCccccCCCCCCeEEccCCCCceEEEecccc
Q 002039 239 SSETVLILEFMDGIRLNDCESLE-AFGVNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLT 315 (977)
Q Consensus 239 ~~~~vLVmE~i~G~~L~~~~~~~-~~~~~~~~l~~~l~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~ 315 (977)
....++||||+.|.++.++.... ..+.+...+...+.+++ +..+|..|++|+|+||.||+++.+ +.+++.|||.+
T Consensus 71 ~~~~~~v~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~qi~~aL~~lH~~~ivHrDlkp~Nill~~~--~~~~~~~~~~~ 148 (328)
T cd08226 71 GSWLWVISPFMAYGSANSLLKTYFPEGMSEALIGNILFGALRGLNYLHQNGYIHRNIKASHILISGD--GLVSLSGLSHL 148 (328)
T ss_pred CCceEEEEecccCCCHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEeCC--CcEEEechHHH
Confidence 45568999999999987764321 12345554444444443 778899999999999999999865 88999999765
Q ss_pred c
Q 002039 316 K 316 (977)
Q Consensus 316 ~ 316 (977)
.
T Consensus 149 ~ 149 (328)
T cd08226 149 Y 149 (328)
T ss_pred h
Confidence 3
No 399
>cd07852 STKc_MAPK15 Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimul
Probab=98.85 E-value=1.1e-08 Score=115.85 Aligned_cols=140 Identities=20% Similarity=0.205 Sum_probs=87.7
Q ss_pred cccccccccEEEEEEec-CCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCcHHHH
Q 002039 124 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (977)
Q Consensus 124 ~piasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea 202 (977)
+.||.|++|.||+|+.. +|+.||||.........- ....+.+|.
T Consensus 13 ~~lg~g~~~~v~~~~~~~~~~~~~vK~~~~~~~~~~-----------------------------------~~~~~~~E~ 57 (337)
T cd07852 13 QKLGKGAYGIVWKAIDRRTKEVVALKKIFDAFRNAT-----------------------------------DAQRTFREI 57 (337)
T ss_pred HhhcCCCCeeEEEEEEcCCCeEEEEEeeccccCcch-----------------------------------hhhhhhHHH
Confidence 57999999999999975 689999997643211000 000233455
Q ss_pred HHHHHH-HHHhCCCCCCCCCCCCCCCCCCeEeceeeec---CCceEEeeccCCCCCCChHHHHhcCCCHHHHHHHHHHHH
Q 002039 203 ENTRIV-SANLGCKNKHEDSNKKPAYEVDVLIPEVIQS---SETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY 278 (977)
Q Consensus 203 ~n~~~~-~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~~---~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~ 278 (977)
..+.++ .+ ...+.+..++.. ...++||||++| +|.+.. ....++.......+.+++
T Consensus 58 ~~l~~l~~h-----------------~ni~~~~~~~~~~~~~~~~lv~e~~~~-~L~~~~--~~~~~~~~~~~~i~~qi~ 117 (337)
T cd07852 58 MFLQELGDH-----------------PNIVKLLNVIKAENDKDIYLVFEYMET-DLHAVI--RANILEDVHKRYIMYQLL 117 (337)
T ss_pred HHHHHhcCC-----------------CCccceeeeeccCCCceEEEEeccccc-CHHHHH--hcCCCCHHHHHHHHHHHH
Confidence 555554 21 111222222221 235899999986 554432 222334333333333332
Q ss_pred --HHHHHhcCccccCCCCCCeEEccCCCCceEEEecccccccCH
Q 002039 279 --AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 320 (977)
Q Consensus 279 --l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 320 (977)
+..+|..|++|+|++|.||+++.+ +.++|+|||++..+..
T Consensus 118 ~~L~~LH~~~i~H~dl~p~nill~~~--~~~kl~d~g~~~~~~~ 159 (337)
T cd07852 118 KALKYIHSGNVIHRDLKPSNILLNSD--CRVKLADFGLARSLSE 159 (337)
T ss_pred HHHHHHHHCCeecCCCCHHHEEEcCC--CcEEEeeccchhcccc
Confidence 678899999999999999999865 8999999999886643
No 400
>cd07834 STKc_MAPK Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and
Probab=98.85 E-value=4.5e-09 Score=118.59 Aligned_cols=77 Identities=16% Similarity=0.286 Sum_probs=55.6
Q ss_pred CceEEeeccCCCCCCChHHHHhcCCCHHHHHHHHHHHH--HHHHHhcCccccCCCCCCeEEccCCCCceEEEeccccccc
Q 002039 241 ETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKL 318 (977)
Q Consensus 241 ~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l 318 (977)
..+++|||+++ +|.+... ....++...+...+.+++ +..+|..|++|+|+||.||+++.+ +.++|+|||++...
T Consensus 78 ~~~lv~e~~~~-~l~~~l~-~~~~l~~~~~~~i~~~l~~~l~~LH~~gi~H~dlkp~nili~~~--~~~~L~dfg~~~~~ 153 (330)
T cd07834 78 DVYIVTELMET-DLHKVIK-SPQPLTDDHIQYFLYQILRGLKYLHSANVIHRDLKPSNILVNSN--CDLKICDFGLARGV 153 (330)
T ss_pred ceEEEecchhh-hHHHHHh-CCCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCC--CCEEEcccCceEee
Confidence 45899999985 4544321 111344444444444433 678999999999999999999865 89999999999887
Q ss_pred CHH
Q 002039 319 SSS 321 (977)
Q Consensus 319 ~~~ 321 (977)
...
T Consensus 154 ~~~ 156 (330)
T cd07834 154 DPD 156 (330)
T ss_pred ccc
Confidence 654
No 401
>smart00220 S_TKc Serine/Threonine protein kinases, catalytic domain. Phosphotransferases. Serine or threonine-specific kinase subfamily.
Probab=98.84 E-value=6.4e-09 Score=110.43 Aligned_cols=79 Identities=23% Similarity=0.337 Sum_probs=60.9
Q ss_pred CCceEEeeccCCCCCCChHHHHhcCCCHHHHHHHHHHHH--HHHHHhcCccccCCCCCCeEEccCCCCceEEEecccccc
Q 002039 240 SETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKK 317 (977)
Q Consensus 240 ~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~ 317 (977)
...+++|||+++.+|.++.... ...+...+...+.++. +..+|..|++|+|++|.||+++.+ +.++|+|||.+..
T Consensus 60 ~~~~l~~e~~~~~~L~~~~~~~-~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~~i~~~ni~~~~~--~~~~l~d~~~~~~ 136 (244)
T smart00220 60 DKLYLVMEYCDGGDLFDLLKKR-GRLSEDEARFYARQILSALEYLHSNGIIHRDLKPENILLDED--GHVKLADFGLARQ 136 (244)
T ss_pred CEEEEEEeCCCCCCHHHHHHhc-cCCCHHHHHHHHHHHHHHHHHHHHcCeecCCcCHHHeEECCC--CcEEEccccceee
Confidence 5568999999998888764322 1245555555554443 778899999999999999999865 8999999999988
Q ss_pred cCHH
Q 002039 318 LSSS 321 (977)
Q Consensus 318 l~~~ 321 (977)
+...
T Consensus 137 ~~~~ 140 (244)
T smart00220 137 LDPG 140 (244)
T ss_pred eccc
Confidence 7654
No 402
>cd08225 STKc_Nek5 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown.
Probab=98.84 E-value=6.8e-09 Score=112.14 Aligned_cols=144 Identities=15% Similarity=0.167 Sum_probs=89.7
Q ss_pred cccccccccEEEEEEec-CCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCcHHHH
Q 002039 124 TPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (977)
Q Consensus 124 ~piasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea 202 (977)
++++.|++|.||+++.+ +|..||+|.....-... . .+-.+.+|.
T Consensus 6 ~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~--~---------------------------------~~~~~~~E~ 50 (257)
T cd08225 6 KKIGEGSFGKIYLAKAKSDSEHCVIKEIDLTKMPV--K---------------------------------EKEASKKEV 50 (257)
T ss_pred EEecCCCcceEEEEEEcCCCceEEEEEeeHhhccc--h---------------------------------hhHHHHHHH
Confidence 67999999999999985 68999999764310000 0 000123344
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeee-cCCceEEeeccCCCCCCChHHHHh-cCCCHHHHHHHHHHHH--
Q 002039 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLEA-FGVNKQKVVEEITRAY-- 278 (977)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLVmE~i~G~~L~~~~~~~~-~~~~~~~l~~~l~~~~-- 278 (977)
..+..+++ ...+.+...+. ....+++|||++|.+|.+...... ...+...+...+.++.
T Consensus 51 ~~l~~~~h-----------------~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~~ 113 (257)
T cd08225 51 ILLAKMKH-----------------PNIVTFFASFQENGRLFIVMEYCDGGDLMKRINRQRGVLFSEDQILSWFVQISLG 113 (257)
T ss_pred HHHHhCCC-----------------CChhhhhheeccCCeEEEEEecCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHH
Confidence 44333321 00111111111 455689999999999977643211 1234444444444433
Q ss_pred HHHHHhcCccccCCCCCCeEEccCCCCceEEEecccccccCH
Q 002039 279 AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 320 (977)
Q Consensus 279 l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 320 (977)
+..+|..|++|+|++|.||+++.+ +..++|+|||.+..+..
T Consensus 114 l~~lh~~~i~H~dl~~~nil~~~~-~~~~~l~d~~~~~~~~~ 154 (257)
T cd08225 114 LKHIHDRKILHRDIKSQNIFLSKN-GMVAKLGDFGIARQLND 154 (257)
T ss_pred HHHHHHCCcccccCCHHHEEEcCC-CCeEEecccccchhccC
Confidence 678899999999999999999865 23569999998876643
No 403
>KOG1035 consensus eIF-2alpha kinase GCN2 [Translation, ribosomal structure and biogenesis]
Probab=98.83 E-value=2.1e-09 Score=131.22 Aligned_cols=74 Identities=19% Similarity=0.298 Sum_probs=53.2
Q ss_pred eEEeeccCCCCCCChHHHHhcCCCHHHHHHHHHHHH--HHHHHhcCccccCCCCCCeEEccCCCCceEEEeccccccc
Q 002039 243 VLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKL 318 (977)
Q Consensus 243 vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l 318 (977)
++-||||+-..+.++..-....-.+...-+...+++ +.+||..|+||||+||.||+++.+ +.|+|.|||++..+
T Consensus 672 YIQMEyCE~~ll~~iI~~N~~~~~~d~~wrLFreIlEGLaYIH~~giIHRDLKP~NIFLd~~--~~VKIGDFGLAt~~ 747 (1351)
T KOG1035|consen 672 YIQMEYCEKTLLRDIIRRNHFNSQRDEAWRLFREILEGLAYIHDQGIIHRDLKPRNIFLDSR--NSVKIGDFGLATDL 747 (1351)
T ss_pred EEEHhhhhhhHHHHHHHhcccchhhHHHHHHHHHHHHHHHHHHhCceeeccCCcceeEEcCC--CCeeecccccchhh
Confidence 689999998777776432222112333322222232 778999999999999999999955 89999999999764
No 404
>KOG0579 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]
Probab=98.82 E-value=1.5e-09 Score=123.26 Aligned_cols=80 Identities=18% Similarity=0.219 Sum_probs=60.3
Q ss_pred cCCceEEeeccCCCCCCChHHHHhcCCCHHHHHHHHHHHH--HHHHHhcCccccCCCCCCeEEccCCCCceEEEeccccc
Q 002039 239 SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTK 316 (977)
Q Consensus 239 ~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~ 316 (977)
.++.++..|||.|+-++.+.---..++....|-..+.+.+ +..+|..+|+|||+|.||||++-| |.|.|.|||...
T Consensus 101 enkLwiliEFC~GGAVDaimlEL~r~LtE~QIqvvc~q~ldALn~LHs~~iIHRDLKAGNiL~Tld--GdirLADFGVSA 178 (1187)
T KOG0579|consen 101 ENKLWILIEFCGGGAVDAIMLELGRVLTEDQIQVVCYQVLDALNWLHSQNIIHRDLKAGNILLTLD--GDIRLADFGVSA 178 (1187)
T ss_pred cCceEEEEeecCCchHhHHHHHhccccchHHHHHHHHHHHHHHHHHhhcchhhhhccccceEEEec--CcEeeecccccc
Confidence 5677899999999998876433334444444333333333 778999999999999999999977 999999999987
Q ss_pred ccCH
Q 002039 317 KLSS 320 (977)
Q Consensus 317 ~l~~ 320 (977)
....
T Consensus 179 Kn~~ 182 (1187)
T KOG0579|consen 179 KNKS 182 (1187)
T ss_pred cchh
Confidence 6644
No 405
>cd07858 STKc_TEY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TEY Mitogen-Activated Protein Kinases from Plants. Serine/Threonine Kinases (STKs), Plant TEY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TEY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activati
Probab=98.81 E-value=9.2e-09 Score=116.64 Aligned_cols=76 Identities=18% Similarity=0.293 Sum_probs=54.6
Q ss_pred CceEEeeccCCCCCCChHHHHhcCCCHHHHHHHHHHHH--HHHHHhcCccccCCCCCCeEEccCCCCceEEEeccccccc
Q 002039 241 ETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKL 318 (977)
Q Consensus 241 ~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l 318 (977)
..+|||||++| .|.+... ....+....+...+.+++ +..+|..|++|+|+||.||+++.+ +.++|+|||++...
T Consensus 83 ~~~lv~e~~~~-~L~~~~~-~~~~l~~~~~~~i~~qi~~aL~~LH~~~i~H~dlkp~Nil~~~~--~~~kL~Dfg~~~~~ 158 (337)
T cd07858 83 DVYIVYELMDT-DLHQIIR-SSQTLSDDHCQYFLYQLLRGLKYIHSANVLHRDLKPSNLLLNAN--CDLKICDFGLARTT 158 (337)
T ss_pred cEEEEEeCCCC-CHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEEcCC--CCEEECcCcccccc
Confidence 45899999975 4544321 112344445444444443 778999999999999999999865 88999999998766
Q ss_pred CH
Q 002039 319 SS 320 (977)
Q Consensus 319 ~~ 320 (977)
..
T Consensus 159 ~~ 160 (337)
T cd07858 159 SE 160 (337)
T ss_pred CC
Confidence 43
No 406
>KOG0596 consensus Dual specificity; serine/threonine and tyrosine kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=98.81 E-value=7.1e-09 Score=117.27 Aligned_cols=140 Identities=17% Similarity=0.260 Sum_probs=89.8
Q ss_pred cccccccccEEEEEEecCCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCcHHHHH
Q 002039 124 TPLATASIAQVHRATLVDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEAE 203 (977)
Q Consensus 124 ~piasaSigqV~~A~l~~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea~ 203 (977)
+-||+|+-+.||++...+.+-+|+|-.. ....|-+ .++ -|++|..
T Consensus 367 k~iG~GGSSkV~kV~~s~~~iyalkkv~-----~~~~D~q--------------------tl~----------gy~nEI~ 411 (677)
T KOG0596|consen 367 KQIGSGGSSKVFKVLNSDKQIYALKKVV-----LLEADNQ--------------------TLD----------GYRNEIA 411 (677)
T ss_pred HhhcCCCcceeeeeecCCCcchhhhHHH-----HhhcCHH--------------------HHH----------HHHHHHH
Confidence 5799999999999987666777776211 0001111 112 3677888
Q ss_pred HHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeee----cCCceEEeeccCCCCCCChHHHHhcCCCH----HHHHHHHH
Q 002039 204 NTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ----SSETVLILEFMDGIRLNDCESLEAFGVNK----QKVVEEIT 275 (977)
Q Consensus 204 n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~----~~~~vLVmE~i~G~~L~~~~~~~~~~~~~----~~l~~~l~ 275 (977)
-+.+|... ..|-++|. .+..|+|||+=+ ..|..+.... ..... ..+.+.++
T Consensus 412 lL~KLkg~-------------------~~IIqL~DYEv~d~~lYmvmE~Gd-~DL~kiL~k~-~~~~~~~~lk~ywkqML 470 (677)
T KOG0596|consen 412 LLNKLKGH-------------------DKIIQLYDYEVTDGYLYMVMECGD-IDLNKILKKK-KSIDPDWFLKFYWKQML 470 (677)
T ss_pred HHHHhcCC-------------------ceEEEEeeeeccCceEEEEeeccc-ccHHHHHHhc-cCCCchHHHHHHHHHHH
Confidence 88877642 34445553 456689999754 4455443211 12222 12222232
Q ss_pred HHHHHHHHhcCccccCCCCCCeEEccCCCCceEEEecccccccCHHHH
Q 002039 276 RAYAHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSSSMK 323 (977)
Q Consensus 276 ~~~l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~~~r 323 (977)
. .++.||.+||||+||||.|+|+- .|+++|||||++..+..+..
T Consensus 471 ~-aV~~IH~~gIVHSDLKPANFLlV---kG~LKLIDFGIA~aI~~DTT 514 (677)
T KOG0596|consen 471 L-AVKTIHQHGIVHSDLKPANFLLV---KGRLKLIDFGIANAIQPDTT 514 (677)
T ss_pred H-HHHHHHHhceeecCCCcccEEEE---eeeEEeeeechhcccCcccc
Confidence 2 26778999999999999999885 38999999999998876543
No 407
>KOG4645 consensus MAPKKK (MAP kinase kinase kinase) SSK2 and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=98.79 E-value=3.8e-09 Score=129.56 Aligned_cols=78 Identities=18% Similarity=0.226 Sum_probs=56.4
Q ss_pred CCceEEeeccCCCCCCChHHHHhcCCCHHHHHHHHH---HHHHHHHHhcCccccCCCCCCeEEccCCCCceEEEeccccc
Q 002039 240 SETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEIT---RAYAHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTK 316 (977)
Q Consensus 240 ~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~---~~~l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~ 316 (977)
.+-+|-||||+|++|.++.+.. +...+.+.+... -.-+..||++|||||||||.||+++.. |-|++.|||++.
T Consensus 1307 ekv~IFMEyC~~GsLa~ll~~g--ri~dE~vt~vyt~qll~gla~LH~~gIVHRDIK~aNI~Ld~~--g~iK~~DFGsa~ 1382 (1509)
T KOG4645|consen 1307 EKVYIFMEYCEGGSLASLLEHG--RIEDEMVTRVYTKQLLEGLAYLHEHGIVHRDIKPANILLDFN--GLIKYGDFGSAV 1382 (1509)
T ss_pred HHHHHHHHHhccCcHHHHHHhc--chhhhhHHHHHHHHHHHHHHHHHhcCceecCCCccceeeecC--CcEEeeccccee
Confidence 3446889999999999975422 222221111111 111667899999999999999999966 899999999999
Q ss_pred ccCHH
Q 002039 317 KLSSS 321 (977)
Q Consensus 317 ~l~~~ 321 (977)
.+...
T Consensus 1383 ki~~~ 1387 (1509)
T KOG4645|consen 1383 KIKNN 1387 (1509)
T ss_pred EecCc
Confidence 88654
No 408
>cd08216 PK_STRAD Pseudokinase domain of STE20-related kinase adapter protein. Protein Kinase family, STE20-related kinase adapter protein (STRAD) subfamily, pseudokinase domain. The STRAD subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpigmentation of the buc
Probab=98.79 E-value=2.1e-08 Score=112.17 Aligned_cols=79 Identities=15% Similarity=0.166 Sum_probs=59.3
Q ss_pred cCCceEEeeccCCCCCCChHHHH-hcCCCHHHHHHHHHHHH--HHHHHhcCccccCCCCCCeEEccCCCCceEEEecccc
Q 002039 239 SSETVLILEFMDGIRLNDCESLE-AFGVNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLT 315 (977)
Q Consensus 239 ~~~~vLVmE~i~G~~L~~~~~~~-~~~~~~~~l~~~l~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~ 315 (977)
....+++|||+++.++.++.... ..+.+...+...+.+++ +..+|..|++|+|+||+||+++.+ +.++|.|||.+
T Consensus 71 ~~~~~~~~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~LH~~~ivH~dlk~~Nili~~~--~~~kl~d~~~~ 148 (314)
T cd08216 71 DSELYVVSPLMAYGSCEDLLKTHFPEGLPELAIAFILKDVLNALDYIHSKGFIHRSVKASHILLSGD--GKVVLSGLRYS 148 (314)
T ss_pred CCeEEEEEeccCCCCHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCcceEEEecC--CceEEecCccc
Confidence 45568999999999988764422 12344444444444433 778899999999999999999865 89999999988
Q ss_pred cccC
Q 002039 316 KKLS 319 (977)
Q Consensus 316 ~~l~ 319 (977)
..+.
T Consensus 149 ~~~~ 152 (314)
T cd08216 149 VSMI 152 (314)
T ss_pred eeec
Confidence 7664
No 409
>KOG0199 consensus ACK and related non-receptor tyrosine kinases [Signal transduction mechanisms]
Probab=98.79 E-value=5.4e-09 Score=120.59 Aligned_cols=140 Identities=19% Similarity=0.213 Sum_probs=96.7
Q ss_pred cccccccccEEEEEEec--CCC--EEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCcH
Q 002039 124 TPLATASIAQVHRATLV--DGR--QVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFN 199 (977)
Q Consensus 124 ~piasaSigqV~~A~l~--~G~--~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~ 199 (977)
+-||+||||.||+|.+. +|+ .||||+++++....+ ++ ||+
T Consensus 116 e~LG~GsFgvV~rg~Wt~psgk~V~VAVKclr~d~l~~~--------------------------md----------dfl 159 (1039)
T KOG0199|consen 116 ELLGEGSFGVVKRGTWTQPSGKHVNVAVKCLRDDSLNAI--------------------------MD----------DFL 159 (1039)
T ss_pred HHhcCcceeeEeeccccCCCCcEEeEEEEeccCCccchh--------------------------HH----------HHH
Confidence 35899999999999874 565 589999988765321 11 788
Q ss_pred HHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeee---cCCceEEeeccCCCCCCChHHHH-hcCCCHHHHHHHHH
Q 002039 200 SEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ---SSETVLILEFMDGIRLNDCESLE-AFGVNKQKVVEEIT 275 (977)
Q Consensus 200 ~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~---~~~~vLVmE~i~G~~L~~~~~~~-~~~~~~~~l~~~l~ 275 (977)
+|+..+.+++|. ++-++|. .....+|||.+++++|-+..... ...+-...+...+.
T Consensus 160 rEas~M~~L~H~--------------------hliRLyGvVl~qp~mMV~ELaplGSLldrLrka~~~~llv~~Lcdya~ 219 (1039)
T KOG0199|consen 160 REASHMLKLQHP--------------------HLIRLYGVVLDQPAMMVFELAPLGSLLDRLRKAKKAILLVSRLCDYAM 219 (1039)
T ss_pred HHHHHHHhccCc--------------------ceeEEeeeeccchhhHHhhhcccchHHHHHhhccccceeHHHHHHHHH
Confidence 999999887651 2223332 44557899999999997653321 11122233333333
Q ss_pred HHH--HHHHHhcCccccCCCCCCeEEccCCCCceEEEecccccccCHH
Q 002039 276 RAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSSS 321 (977)
Q Consensus 276 ~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~~ 321 (977)
++. +..+-..++||||+-..|+|+-.. ..|+|+|||+++.|...
T Consensus 220 QiA~aM~YLeskrlvHRDLAARNlllasp--rtVKI~DFGLmRaLg~n 265 (1039)
T KOG0199|consen 220 QIAKAMQYLESKRLVHRDLAARNLLLASP--RTVKICDFGLMRALGEN 265 (1039)
T ss_pred HHHHHHHHHhhhhhhhhhhhhhhheeccc--ceeeeecccceeccCCC
Confidence 333 444456899999999999999754 68999999999998653
No 410
>KOG0984 consensus Mitogen-activated protein kinase (MAPK) kinase MKK3/MKK6 [Signal transduction mechanisms]
Probab=98.78 E-value=2.3e-08 Score=100.44 Aligned_cols=80 Identities=21% Similarity=0.337 Sum_probs=53.7
Q ss_pred cCCceEEeeccCCCCCCChHH--HHhcCCCHHH----HHHHHHHHHHHHHHh-cCccccCCCCCCeEEccCCCCceEEEe
Q 002039 239 SSETVLILEFMDGIRLNDCES--LEAFGVNKQK----VVEEITRAYAHQIYV-DGFFNGDPHPGNFLVSKDPPHRPILLD 311 (977)
Q Consensus 239 ~~~~vLVmE~i~G~~L~~~~~--~~~~~~~~~~----l~~~l~~~~l~~i~~-~G~~H~D~hPgNIlv~~~~~g~i~LiD 311 (977)
+.+-++.||.++ .+|+.+-. +...+.-++. ++-.++++ +..+|. ..++|||+||+|||++.+ |+++++|
T Consensus 117 egdvwIcME~M~-tSldkfy~~v~~~g~~ipE~vlGkIa~Svv~a-l~~L~~kL~vIHRDvKPsNiLIn~~--GqVKiCD 192 (282)
T KOG0984|consen 117 EGDVWICMELMD-TSLDKFYRKVLKKGGTIPEDVLGKIAVSVVHA-LEFLHSKLSVIHRDVKPSNILINYD--GQVKICD 192 (282)
T ss_pred cccEEEeHHHhh-hhHHHHHHHHHhcCCcCchHHhhHhHHHHHHH-HHHHHHHhhhhhccCCcceEEEccC--CcEEEcc
Confidence 788899999996 34433211 1222222222 33333333 445553 689999999999999977 9999999
Q ss_pred cccccccCHHH
Q 002039 312 FGLTKKLSSSM 322 (977)
Q Consensus 312 FG~~~~l~~~~ 322 (977)
||+++.+.+..
T Consensus 193 FGIsG~L~dSi 203 (282)
T KOG0984|consen 193 FGISGYLVDSI 203 (282)
T ss_pred cccceeehhhh
Confidence 99999987643
No 411
>KOG3087 consensus Serine/threonine protein kinase [General function prediction only]
Probab=98.76 E-value=7.3e-08 Score=95.92 Aligned_cols=145 Identities=21% Similarity=0.293 Sum_probs=93.4
Q ss_pred CccccccccccEEEEEEecCCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCcHHH
Q 002039 122 VETPLATASIAQVHRATLVDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSE 201 (977)
Q Consensus 122 d~~piasaSigqV~~A~l~~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~E 201 (977)
+..++-.|.-|.|+++.. +|+..+||-..|.--+.=..|.++-+ . ...+|
T Consensus 11 ~l~likQGAEArv~~~~~-~Ge~~iIK~Rf~K~YRHP~LD~kLtr------------------------~-----Rt~~E 60 (229)
T KOG3087|consen 11 SLELIKQGAEARVPRGSF-SGEAAIIKERFSKRYRHPALDQKLTR------------------------K-----RTKQE 60 (229)
T ss_pred cceeeeccceeeEeeecc-CCceeEEeecccccccchHHHHHHHH------------------------H-----HHHHH
Confidence 356788899999999986 79999999653321111111211111 0 23568
Q ss_pred HHHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeee--cCCceEEeeccCC-CCCCChHHHHh-cC-CCHH--HHHHHH
Q 002039 202 AENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ--SSETVLILEFMDG-IRLNDCESLEA-FG-VNKQ--KVVEEI 274 (977)
Q Consensus 202 a~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~--~~~~vLVmE~i~G-~~L~~~~~~~~-~~-~~~~--~l~~~l 274 (977)
|+.+.+++. .++.+|.++. .....|.|||++| .++.+.....- .. .+.. .++..+
T Consensus 61 ar~l~k~~~------------------~GI~~P~l~~~D~~~~~i~ME~~~g~~~vk~~i~~~~~~~~~d~~~~~~~~~i 122 (229)
T KOG3087|consen 61 ARLLAKCRA------------------LGIPAPRLIFIDTYGGQIYMEFIDGASTVKDFILSTMEDESEDEGLAELARRI 122 (229)
T ss_pred HHHHHHHHH------------------hCCCCceEEEEecCCCeEEEEeccchhHHHHHHHHHccCcccchhHHHHHHHH
Confidence 888887765 2688999987 5678999999999 34444322111 11 1111 233333
Q ss_pred HHHHHHHHHhcCccccCCCCCCeEEccCCCCc--eEEEeccccc
Q 002039 275 TRAYAHQIYVDGFFNGDPHPGNFLVSKDPPHR--PILLDFGLTK 316 (977)
Q Consensus 275 ~~~~l~~i~~~G~~H~D~hPgNIlv~~~~~g~--i~LiDFG~~~ 316 (977)
-+. +.-+|..+++|+|+--.||++.++ +++ +.|||||+..
T Consensus 123 G~~-igklH~ndiiHGDLTTSNill~~~-~~~~~~~lIdfgls~ 164 (229)
T KOG3087|consen 123 GEL-IGKLHDNDIIHGDLTTSNILLRSD-GNQITPILIDFGLSS 164 (229)
T ss_pred HHH-HHHhhhCCeecccccccceEEecC-CCcCceEEEeecchh
Confidence 332 556799999999999999999876 344 4999999854
No 412
>KOG0607 consensus MAP kinase-interacting kinase and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=98.72 E-value=3.1e-08 Score=105.28 Aligned_cols=141 Identities=16% Similarity=0.188 Sum_probs=90.2
Q ss_pred cCccccccccccEEEEEE-ecCCCEEEEEEec--CCh-hhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhccccc
Q 002039 121 FVETPLATASIAQVHRAT-LVDGRQVVVKVQH--QGI-KTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKEL 196 (977)
Q Consensus 121 ~d~~piasaSigqV~~A~-l~~G~~VAVKv~~--p~i-~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~El 196 (977)
+..+-+|+|.+|.|--++ +.+|.++||||.. |+. +.++.++..++....
T Consensus 81 Lt~e~LGeGAyasVqtcv~i~t~~EYAVKiidKq~gHsR~RvfREVe~f~~Cq--------------------------- 133 (463)
T KOG0607|consen 81 LTSELLGEGAYASVQTCVSIQTGKEYAVKIIDKQPGHSRSRVFREVETFYQCQ--------------------------- 133 (463)
T ss_pred hHHHHhcCccceeeeeeeeeccchhhhhhhhhcCCchHHHHHHHHHHHHHHhc---------------------------
Confidence 345789999999999988 4799999999864 332 233333333222110
Q ss_pred CcHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeeecCCceEEeeccCCCCCCChHHHHhcCCCHHHHHHHH--
Q 002039 197 DFNSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQSSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEI-- 274 (977)
Q Consensus 197 d~~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l-- 274 (977)
--.|+..+-+.|++ .++-|||||-+.|++|-.... +...++..+..+.+
T Consensus 134 ----gh~nilqLiefFEd------------------------d~~FYLVfEKm~GGplLshI~-~~~~F~E~EAs~vvkd 184 (463)
T KOG0607|consen 134 ----GHKNILQLIEFFED------------------------DTRFYLVFEKMRGGPLLSHIQ-KRKHFNEREASRVVKD 184 (463)
T ss_pred ----CCccHHHHHHHhcc------------------------cceEEEEEecccCchHHHHHH-HhhhccHHHHHHHHHH
Confidence 01244445554442 456689999999999865432 22234433333322
Q ss_pred HHHHHHHHHhcCccccCCCCCCeEEccCC-CCceEEEecccccc
Q 002039 275 TRAYAHQIYVDGFFNGDPHPGNFLVSKDP-PHRPILLDFGLTKK 317 (977)
Q Consensus 275 ~~~~l~~i~~~G~~H~D~hPgNIlv~~~~-~g~i~LiDFG~~~~ 317 (977)
+...+..+|..||-|||+||.|||..+.+ -.-|+|+||-+...
T Consensus 185 ia~aLdFlH~kgIAHRDlKPENiLC~~pn~vsPvKiCDfDLgSg 228 (463)
T KOG0607|consen 185 IASALDFLHTKGIAHRDLKPENILCESPNKVSPVKICDFDLGSG 228 (463)
T ss_pred HHHHHHHHhhcCcccccCCccceeecCCCCcCceeeeccccccc
Confidence 22348899999999999999999987431 12478999977544
No 413
>cd05154 ACAD10_11_like Acyl-CoA dehydrogenase (ACAD) 10 and 11, N-terminal domain, and similar proteins. This subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This subfamily is composed of bacterial and eukaryotic proteins with similarity to the N-terminal domains of vertebrate ACAD10 and ACAD11. ACADs are a family of flavoproteins that are involved in the beta-oxidation of fatty acyl-CoA derivatives. ACAD deficiency can cause metabolic disorders including muscle fatigue, hypoglycemia, and hepatic lipidosis, among them. There are at least 11 distinct ACADs, some of which show distinct substrate specificities to either straight-chain or branched-chain fatty acids. ACAD10 is widely expressed in human tissues and is highly expressed in liver, kidney, pancreas, and spleen. ACAD10 and ACAD11 contain
Probab=98.72 E-value=7.9e-08 Score=101.62 Aligned_cols=145 Identities=22% Similarity=0.280 Sum_probs=89.9
Q ss_pred CccccccccccEEEEEEecCCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCcHHH
Q 002039 122 VETPLATASIAQVHRATLVDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSE 201 (977)
Q Consensus 122 d~~piasaSigqV~~A~l~~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~E 201 (977)
+-+|++.|..++||+++..+|+.++||+.+++... ....++.+|
T Consensus 2 ~~~~l~~G~~n~~~~v~~~~g~~~ilK~~~~~~~~------------------------------------~~~~~~~~E 45 (223)
T cd05154 2 EVRQLSGGQSNLTYLLTAGGGRRLVLRRPPPGALL------------------------------------PSAHDVARE 45 (223)
T ss_pred cceecCCCccceEEEEEecCCcceEEEeCCCcccC------------------------------------cccccHHHH
Confidence 34789999999999999877799999986543210 011245677
Q ss_pred HHHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeee-c-C-----CceEEeeccCCCCCCChHH--------H----Hh
Q 002039 202 AENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-S-S-----ETVLILEFMDGIRLNDCES--------L----EA 262 (977)
Q Consensus 202 a~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~-~-----~~vLVmE~i~G~~L~~~~~--------~----~~ 262 (977)
++.+..+++ ..+.+|+++. + . ..+++|||++|.++.+... . ..
T Consensus 46 ~~~~~~l~~------------------~~~~vp~~~~~~~~~~~~~~~~~v~e~i~G~~l~~~~~~~~~~~~~~~~i~~~ 107 (223)
T cd05154 46 YRVLRALAG------------------TGVPVPKVLALCEDPSVLGTPFYVMERVDGRVLRDRLLRPELSPEERRALARA 107 (223)
T ss_pred HHHHHHhhC------------------CCCCCCCEEEECCCCCccCCceEEEEEeCCEecCCCCCCCCCCHHHHHHHHHH
Confidence 777777654 1356777765 1 1 3589999999998876421 0 00
Q ss_pred --------cCCCH----------------HHHHH---HH----------HHHHHHHH-------HhcCccccCCCCCCeE
Q 002039 263 --------FGVNK----------------QKVVE---EI----------TRAYAHQI-------YVDGFFNGDPHPGNFL 298 (977)
Q Consensus 263 --------~~~~~----------------~~l~~---~l----------~~~~l~~i-------~~~G~~H~D~hPgNIl 298 (977)
+..+. ..+.. .+ +....+.+ ...+++|+|+||+||+
T Consensus 108 i~~~l~~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~HgD~~~~Nil 187 (223)
T cd05154 108 LADTLAALHSVDPAAVGLGDLGRPGGYLERQVARWRRQYDASRTDEPPAMERLLRWLEAHLPADSRPGLVHGDYRLGNVL 187 (223)
T ss_pred HHHHHHHHhCCChhhcCCcccCCCCchHHHHHHHHHHHHHhhcccccHHHHHHHHHHHhhCCCCCCcEEEECCCCcccEE
Confidence 00000 00000 00 00011111 1368999999999999
Q ss_pred EccCCCCceEEEecccccccCH
Q 002039 299 VSKDPPHRPILLDFGLTKKLSS 320 (977)
Q Consensus 299 v~~~~~g~i~LiDFG~~~~l~~ 320 (977)
++.+.++.+.||||+.++.-++
T Consensus 188 ~~~~~~~~~~iID~e~~~~g~~ 209 (223)
T cd05154 188 FHPDEPRVVAVLDWELATLGDP 209 (223)
T ss_pred EcCCCCcEEEEEeccccccCCh
Confidence 9863135688999999886554
No 414
>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]
Probab=98.71 E-value=2.4e-08 Score=115.61 Aligned_cols=80 Identities=21% Similarity=0.231 Sum_probs=57.5
Q ss_pred cCCceEEeeccCCCCCCChHHHHhcCCCHHHHHHHHHHHH--HHHHHhcCccccCCCCCCeEEccCCCCceEEEeccccc
Q 002039 239 SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTK 316 (977)
Q Consensus 239 ~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~ 316 (977)
...-++|||.+.|.-+-+... ............+.++. ++.+|.+|+||||+||+|||++. ..+.|.|+|||..+
T Consensus 388 ~~~~~~v~e~l~g~ell~ri~--~~~~~~~e~~~w~~~lv~Av~~LH~~gvvhRDLkp~NIL~~~-~~g~lrltyFG~a~ 464 (612)
T KOG0603|consen 388 GKEIYLVMELLDGGELLRRIR--SKPEFCSEASQWAAELVSAVDYLHEQGVVHRDLKPGNILLDG-SAGHLRLTYFGFWS 464 (612)
T ss_pred CceeeeeehhccccHHHHHHH--hcchhHHHHHHHHHHHHHHHHHHHhcCeeecCCChhheeecC-CCCcEEEEEechhh
Confidence 345689999999876654322 22222233333444433 88899999999999999999952 24889999999999
Q ss_pred ccCHH
Q 002039 317 KLSSS 321 (977)
Q Consensus 317 ~l~~~ 321 (977)
.+..+
T Consensus 465 ~~~~~ 469 (612)
T KOG0603|consen 465 ELERS 469 (612)
T ss_pred hCchh
Confidence 98776
No 415
>KOG4717 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=98.70 E-value=3.2e-08 Score=110.55 Aligned_cols=149 Identities=24% Similarity=0.227 Sum_probs=95.7
Q ss_pred ccccccccccEEEEEEe-cCCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCcHHH
Q 002039 123 ETPLATASIAQVHRATL-VDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSE 201 (977)
Q Consensus 123 ~~piasaSigqV~~A~l-~~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~E 201 (977)
++-||.|-|+.|-.|++ -+|+.|||||...--- .|+. .. .+.+|
T Consensus 23 ekTlG~GHFAVVKLArHVFTGekVAVKviDKTKl----D~~s-------------------------t~------hlfqE 67 (864)
T KOG4717|consen 23 EKTLGRGHFAVVKLARHVFTGEKVAVKVIDKTKL----DTLS-------------------------TG------HLFQE 67 (864)
T ss_pred hhhhcCCceehhhhhhhhcccceeEEEEeccccc----chhh-------------------------hh------HHHHH
Confidence 36799999999999986 4899999999742100 0000 00 12234
Q ss_pred HHHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeee-cCCceEEeeccCCCCCCChHHHHhcCCCHHHHHHHHHHHH--
Q 002039 202 AENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY-- 278 (977)
Q Consensus 202 a~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~-- 278 (977)
.+-++..++ ...|..-+|+. .++.||++|.=+|+.|.|+.-....|+.....-....+++
T Consensus 68 VRCMKLVQH-----------------pNiVRLYEViDTQTKlyLiLELGD~GDl~DyImKHe~Gl~E~La~kYF~QI~~A 130 (864)
T KOG4717|consen 68 VRCMKLVQH-----------------PNIVRLYEVIDTQTKLYLILELGDGGDLFDYIMKHEEGLNEDLAKKYFAQIVHA 130 (864)
T ss_pred HHHHHHhcC-----------------cCeeeeeehhcccceEEEEEEecCCchHHHHHHhhhccccHHHHHHHHHHHHHH
Confidence 444444332 12244444444 6888999999999999998655555554322111111211
Q ss_pred HHHHHhcCccccCCCCCCeEEccCCCCceEEEecccccccCHHHHH
Q 002039 279 AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSSSMKQ 324 (977)
Q Consensus 279 l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~~~r~ 324 (977)
+...|..-+||||+||+|+.+-+. -|-++|.|||+.-.+.+..+.
T Consensus 131 I~YCHqLHVVHRDLKPENVVFFEK-lGlVKLTDFGFSNkf~PG~kL 175 (864)
T KOG4717|consen 131 ISYCHQLHVVHRDLKPENVVFFEK-LGLVKLTDFGFSNKFQPGKKL 175 (864)
T ss_pred HHHHhhhhhhcccCCcceeEEeee-cCceEeeeccccccCCCcchh
Confidence 333455679999999999987654 488999999998887665544
No 416
>cd08222 STKc_Nek11 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 11. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 11 (Nek11) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek11 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek11 is involved, through direct phosphorylation, in regulating the degradation of Cdc25A (Cell Division Cycle 25 homolog A), which plays a role in cell cycle progression and in activating cyclin dependent kinases. Nek11 is activated by CHK1 (CHeckpoint Kinase 1) and may be involved in the G2/M check
Probab=98.69 E-value=6.6e-08 Score=104.91 Aligned_cols=77 Identities=17% Similarity=0.237 Sum_probs=56.4
Q ss_pred cCCceEEeeccCCCCCCChHHH---HhcCCCHHHHHHHHHHHH--HHHHHhcCccccCCCCCCeEEccCCCCceEEEecc
Q 002039 239 SSETVLILEFMDGIRLNDCESL---EAFGVNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFG 313 (977)
Q Consensus 239 ~~~~vLVmE~i~G~~L~~~~~~---~~~~~~~~~l~~~l~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG 313 (977)
....++||||++|.+|.+.... ....++...+...+.++. +..+|..|++|+|++|.||+++. +.++|+|||
T Consensus 74 ~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~h~~l~~~nili~~---~~~~l~d~g 150 (260)
T cd08222 74 RDAFCIITEYCEGRDLDCKLEELKHTGKTLSENQVCEWFIQLLLGVHYMHQRRILHRDLKAKNIFLKN---NLLKIGDFG 150 (260)
T ss_pred CCceEEEEEeCCCCCHHHHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHcCccccCCChhheEeec---CCEeecccC
Confidence 3456799999999998776432 112344444444444443 67899999999999999999963 579999999
Q ss_pred ccccc
Q 002039 314 LTKKL 318 (977)
Q Consensus 314 ~~~~l 318 (977)
.+..+
T Consensus 151 ~~~~~ 155 (260)
T cd08222 151 VSRLL 155 (260)
T ss_pred ceeec
Confidence 87665
No 417
>PRK15123 lipopolysaccharide core heptose(I) kinase RfaP; Provisional
Probab=98.69 E-value=1.5e-07 Score=102.69 Aligned_cols=101 Identities=12% Similarity=0.090 Sum_probs=68.9
Q ss_pred cHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceee--e-------cCCceEEeeccCCC-CCCChHHHH-hcCCC
Q 002039 198 FNSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVI--Q-------SSETVLILEFMDGI-RLNDCESLE-AFGVN 266 (977)
Q Consensus 198 ~~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~--~-------~~~~vLVmE~i~G~-~L~~~~~~~-~~~~~ 266 (977)
+.+|.+++.++.+. ++.+|.+. . ..+.+||||+++|. +|.++.... ....+
T Consensus 75 a~rE~~~l~~L~~~------------------GIptP~pVa~~e~~~~~~~~~s~LVte~l~~~~sL~~~~~~~~~~~~~ 136 (268)
T PRK15123 75 ADREWRAIHRLHEV------------------GVDTMTGVAFGERGSNPATRTSFIITEDLAPTISLEDYCADWATNPPD 136 (268)
T ss_pred HHHHHHHHHHHHHc------------------CCCCCCeeEEEEecCCCccceeEEEEeeCCCCccHHHHHHhhcccCCC
Confidence 56788999988762 46677663 2 12468999999986 676663210 11111
Q ss_pred ---HHHHHHHHHHHHHHHHHhcCccccCCCCCCeEEcc-----CCCCceEEEecccccc
Q 002039 267 ---KQKVVEEITRAYAHQIYVDGFFNGDPHPGNFLVSK-----DPPHRPILLDFGLTKK 317 (977)
Q Consensus 267 ---~~~l~~~l~~~~l~~i~~~G~~H~D~hPgNIlv~~-----~~~g~i~LiDFG~~~~ 317 (977)
...+...+.+ ++..+|..|++|+|++|+|||++. +++.++.||||+.+..
T Consensus 137 ~~~~~~ll~~la~-~i~~LH~~Gi~HgDL~~~NiLl~~~~~~~~~~~~~~LIDl~r~~~ 194 (268)
T PRK15123 137 PRLKRMLIKRVAT-MVRDMHAAGINHRDCYICHFLLHLPFPGREEDLKLSVIDLHRAQI 194 (268)
T ss_pred HHHHHHHHHHHHH-HHHHHHHCcCccCCCChhhEEEeccccCCCCCceEEEEECCcccc
Confidence 1233333333 477899999999999999999985 2246899999998853
No 418
>KOG0696 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=98.67 E-value=1.5e-08 Score=110.46 Aligned_cols=74 Identities=16% Similarity=0.253 Sum_probs=51.2
Q ss_pred CCceEEeeccCCCCCCChHHHHhcC-CCHHHHHHHH--HHHHHHHHHhcCccccCCCCCCeEEccCCCCceEEEeccccc
Q 002039 240 SETVLILEFMDGIRLNDCESLEAFG-VNKQKVVEEI--TRAYAHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTK 316 (977)
Q Consensus 240 ~~~vLVmE~i~G~~L~~~~~~~~~~-~~~~~l~~~l--~~~~l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~ 316 (977)
.+.+.||||+.|+.|--. +...| +.....+-.. +.+-+..+|..||+-||+|-.|||++.+ |.|+|.||||++
T Consensus 423 DRLyFVMEyvnGGDLMyh--iQQ~GkFKEp~AvFYAaEiaigLFFLh~kgIiYRDLKLDNvmLd~e--GHiKi~DFGmcK 498 (683)
T KOG0696|consen 423 DRLYFVMEYVNGGDLMYH--IQQVGKFKEPVAVFYAAEIAIGLFFLHSKGIIYRDLKLDNVMLDSE--GHIKIADFGMCK 498 (683)
T ss_pred hheeeEEEEecCchhhhH--HHHhcccCCchhhhhhHHHHHHhhhhhcCCeeeeeccccceEeccC--CceEeeeccccc
Confidence 345789999999988632 22222 1111111111 2222556899999999999999999966 999999999997
Q ss_pred c
Q 002039 317 K 317 (977)
Q Consensus 317 ~ 317 (977)
+
T Consensus 499 E 499 (683)
T KOG0696|consen 499 E 499 (683)
T ss_pred c
Confidence 5
No 419
>KOG0986 consensus G protein-coupled receptor kinase [Signal transduction mechanisms]
Probab=98.65 E-value=3.4e-08 Score=109.44 Aligned_cols=144 Identities=17% Similarity=0.170 Sum_probs=102.2
Q ss_pred cccccccccEEEEEEec-CCCEEEEEEec-CChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCcHHH
Q 002039 124 TPLATASIAQVHRATLV-DGRQVVVKVQH-QGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSE 201 (977)
Q Consensus 124 ~piasaSigqV~~A~l~-~G~~VAVKv~~-p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~E 201 (977)
+.||.|+||.||-++.+ +|+-+|.|-+. .-++++ ..|-=-.+|
T Consensus 191 RvlGkGGFGEV~acqvraTGKMYAcKkL~KKRiKkr-----------------------------------~ge~maLnE 235 (591)
T KOG0986|consen 191 RVLGKGGFGEVCACQVRATGKMYACKKLDKKRIKKR-----------------------------------KGETMALNE 235 (591)
T ss_pred EEEecccccceeEEEEecchhhHHHHHHHHHHHHHh-----------------------------------hhhHHhhHH
Confidence 67999999999999875 78888888431 111100 011112345
Q ss_pred HHHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeee---cCCceEEeeccCCCCCCCh-HHHHhcCCCHHHHHHHHHHH
Q 002039 202 AENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ---SSETVLILEFMDGIRLNDC-ESLEAFGVNKQKVVEEITRA 277 (977)
Q Consensus 202 a~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~---~~~~vLVmE~i~G~~L~~~-~~~~~~~~~~~~l~~~l~~~ 277 (977)
...++++.. .+.|--.|. ....+|||..|.|+.|.-. ..+...|++.+++.-..+++
T Consensus 236 k~iL~kV~s-------------------~FiVslaYAfeTkd~LClVLtlMNGGDLkfHiyn~g~~gF~e~ra~FYAAEi 296 (591)
T KOG0986|consen 236 KQILEKVSS-------------------PFIVSLAYAFETKDALCLVLTLMNGGDLKFHIYNHGNPGFDEQRARFYAAEI 296 (591)
T ss_pred HHHHHHhcc-------------------CcEEEEeeeecCCCceEEEEEeecCCceeEEeeccCCCCCchHHHHHHHHHH
Confidence 555555432 344444443 3556899999999998743 22334578888877777776
Q ss_pred H--HHHHHhcCccccCCCCCCeEEccCCCCceEEEecccccccCHHHH
Q 002039 278 Y--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSSSMK 323 (977)
Q Consensus 278 ~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~~~r 323 (977)
+ ++.+|+.+||-||+||.|||+|+. |.+.|.|.|++..+++..+
T Consensus 297 ~cGLehlH~~~iVYRDLKPeNILLDd~--GhvRISDLGLAvei~~g~~ 342 (591)
T KOG0986|consen 297 ICGLEHLHRRRIVYRDLKPENILLDDH--GHVRISDLGLAVEIPEGKP 342 (591)
T ss_pred HhhHHHHHhcceeeccCChhheeeccC--CCeEeeccceEEecCCCCc
Confidence 6 899999999999999999999966 9999999999999987543
No 420
>KOG2052 consensus Activin A type IB receptor, serine/threonine protein kinase [Signal transduction mechanisms]
Probab=98.65 E-value=1e-07 Score=105.67 Aligned_cols=142 Identities=16% Similarity=0.165 Sum_probs=97.0
Q ss_pred cccccccccEEEEEEecCCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCcHHHHH
Q 002039 124 TPLATASIAQVHRATLVDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEAE 203 (977)
Q Consensus 124 ~piasaSigqV~~A~l~~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea~ 203 (977)
+-||.|-||.|+||+. -|+.|||||...--+....++-++.+.++- +. +
T Consensus 217 e~IGkGRyGEVwrG~w-rGe~VAVKiF~srdE~SWfrEtEIYqTvmL----------------------------RH--E 265 (513)
T KOG2052|consen 217 EIIGKGRFGEVWRGRW-RGEDVAVKIFSSRDERSWFRETEIYQTVML----------------------------RH--E 265 (513)
T ss_pred EEecCccccceeeccc-cCCceEEEEecccchhhhhhHHHHHHHHHh----------------------------cc--c
Confidence 5699999999999998 489999999765444444444443332210 00 1
Q ss_pred HHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeeecCCceEEeeccCCCCCCChHHHHhcCCCHHHHHHHHHHHH--HHH
Q 002039 204 NTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQSSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--AHQ 281 (977)
Q Consensus 204 n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~--l~~ 281 (977)
|+-.|-.. .+... ...|+.+||++|-+-++|.|+ +...-++.+...+....+. +.+
T Consensus 266 NILgFIaa-----------D~~~~---------gs~TQLwLvTdYHe~GSL~Dy--L~r~tv~~~~ml~LalS~AsGLaH 323 (513)
T KOG2052|consen 266 NILGFIAA-----------DNKDN---------GSWTQLWLVTDYHEHGSLYDY--LNRNTVTTEGMLKLALSIASGLAH 323 (513)
T ss_pred hhhhhhhc-----------cccCC---------CceEEEEEeeecccCCcHHHH--HhhccCCHHHHHHHHHHHhhhHHH
Confidence 33333210 00000 015788999999999999998 4455677776666555544 555
Q ss_pred HHh--------cCccccCCCCCCeEEccCCCCceEEEecccccccCH
Q 002039 282 IYV--------DGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 320 (977)
Q Consensus 282 i~~--------~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 320 (977)
+|- -.|-|||+|.-||||.++ |.-.|.|+|++...+.
T Consensus 324 LH~eI~GTqgKPaIAHRDlKSKNILVKkn--~~C~IADLGLAv~h~~ 368 (513)
T KOG2052|consen 324 LHMEIVGTQGKPAIAHRDLKSKNILVKKN--GTCCIADLGLAVRHDS 368 (513)
T ss_pred HHHHHhcCCCCchhhccccccccEEEccC--CcEEEeeceeeEEecc
Confidence 553 469999999999999866 8999999999887654
No 421
>KOG0576 consensus Mitogen-activated protein kinase kinase kinase kinase (MAP4K), germinal center kinase family [Signal transduction mechanisms]
Probab=98.64 E-value=1.7e-08 Score=116.47 Aligned_cols=80 Identities=15% Similarity=0.255 Sum_probs=63.1
Q ss_pred cCCceEEeeccCCCCCCChHHHHhcCCCHHHHHHHHHHHH--HHHHHhcCccccCCCCCCeEEccCCCCceEEEeccccc
Q 002039 239 SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTK 316 (977)
Q Consensus 239 ~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~ 316 (977)
..+.+++||||.|.+|.|+.... ..+...+++...-+.. ++.+|..|=+|||+|-+||++++. |.++|.|||..+
T Consensus 84 ~dklwicMEycgggslQdiy~~T-gplselqiayvcRetl~gl~ylhs~gk~hRdiKGanilltd~--gDvklaDfgvsa 160 (829)
T KOG0576|consen 84 RDKLWICMEYCGGGSLQDIYHVT-GPLSELQIAYVCRETLQGLKYLHSQGKIHRDIKGANILLTDE--GDVKLADFGVSA 160 (829)
T ss_pred hcCcEEEEEecCCCcccceeeec-ccchhHHHHHHHhhhhccchhhhcCCcccccccccceeeccc--CceeecccCchh
Confidence 34568999999999999975432 2234455555555554 888999999999999999999966 899999999999
Q ss_pred ccCHH
Q 002039 317 KLSSS 321 (977)
Q Consensus 317 ~l~~~ 321 (977)
+++..
T Consensus 161 qitat 165 (829)
T KOG0576|consen 161 QITAT 165 (829)
T ss_pred hhhhh
Confidence 88754
No 422
>KOG0604 consensus MAP kinase-activated protein kinase 2 [Signal transduction mechanisms]
Probab=98.64 E-value=1.9e-08 Score=106.13 Aligned_cols=141 Identities=18% Similarity=0.188 Sum_probs=91.6
Q ss_pred cCccccccccccEEEEEEec-CCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCcH
Q 002039 121 FVETPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFN 199 (977)
Q Consensus 121 ~d~~piasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~ 199 (977)
++.+.||.|--|.|-.+..+ +|+..|+||++-.-+.+-+-|+ +|....
T Consensus 65 is~qvLG~GinGkV~~C~~k~T~ekfALKvL~Ds~KARrEVeL-------Hw~~s~------------------------ 113 (400)
T KOG0604|consen 65 ISWQVLGAGINGKVVQCVHKRTQEKFALKVLLDSPKARREVEL-------HWMASG------------------------ 113 (400)
T ss_pred ehhhhhccccCCceEEEEeccchhhhHHHHHhcCHHHHhHhhh-------hhhhcC------------------------
Confidence 45688999999999999874 8999999987532221111111 111000
Q ss_pred HHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeee---cCC--ceEEeeccCCCCCCChHHHHhc-CCCHHHHHHH
Q 002039 200 SEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ---SSE--TVLILEFMDGIRLNDCESLEAF-GVNKQKVVEE 273 (977)
Q Consensus 200 ~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~---~~~--~vLVmE~i~G~~L~~~~~~~~~-~~~~~~l~~~ 273 (977)
....|.|-.||. ..+ ..+|||.++|+.|-....-+.. .+..++.++.
T Consensus 114 ---------------------------h~~iV~IidVyeNs~~~rkcLLiVmE~meGGeLfsriq~~g~~afTErea~eI 166 (400)
T KOG0604|consen 114 ---------------------------HPHIVSIIDVYENSYQGRKCLLIVMECMEGGELFSRIQDRGDQAFTEREASEI 166 (400)
T ss_pred ---------------------------CCceEEeehhhhhhccCceeeEeeeecccchHHHHHHHHcccccchHHHHHHH
Confidence 112345555554 122 3579999999988654332222 2445555555
Q ss_pred HHHHH--HHHHHhcCccccCCCCCCeEEccC-CCCceEEEecccccccC
Q 002039 274 ITRAY--AHQIYVDGFFNGDPHPGNFLVSKD-PPHRPILLDFGLTKKLS 319 (977)
Q Consensus 274 l~~~~--l~~i~~~G~~H~D~hPgNIlv~~~-~~g~i~LiDFG~~~~l~ 319 (977)
+-++. +..+|..+|-|||+||+|+|+... ++.-++|.|||+++.-.
T Consensus 167 ~~qI~~Av~~lH~~nIAHRDlKpENLLyt~t~~na~lKLtDfGFAK~t~ 215 (400)
T KOG0604|consen 167 MKQIGLAVRYLHSMNIAHRDLKPENLLYTTTSPNAPLKLTDFGFAKETQ 215 (400)
T ss_pred HHHHHHHHHHHHhcchhhccCChhheeeecCCCCcceEecccccccccC
Confidence 54433 788999999999999999999754 23568999999998654
No 423
>KOG2270 consensus Serine/threonine protein kinase involved in cell cycle control [Signal transduction mechanisms; Cell cycle control, cell division, chromosome partitioning]
Probab=98.63 E-value=1.6e-07 Score=102.58 Aligned_cols=194 Identities=15% Similarity=0.182 Sum_probs=124.6
Q ss_pred cccccCccccccccccEEEEEEecCCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhccccc
Q 002039 117 MFMDFVETPLATASIAQVHRATLVDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKEL 196 (977)
Q Consensus 117 ~f~~~d~~piasaSigqV~~A~l~~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~El 196 (977)
++.+++ -.|..|--+-||.|+-.+|..+||||-+..|--.-.+|=.+ ..-.++... .-..+...++.-|.
T Consensus 144 ~i~~in-GCiSTGKEANVYHat~~dG~~~AIKIYKTSILvFKDRdRYV-~GEfRFRhg-yck~NPRKMVk~WA------- 213 (520)
T KOG2270|consen 144 VIVEIN-GCISTGKEANVYHATEEDGSEFAIKIYKTSILVFKDRDRYV-SGEFRFRHG-YCKHNPRKMVKTWA------- 213 (520)
T ss_pred eeeecc-cccccCccceeEeeecCCCceEEEEEEeeeEEEEechhhhc-cceeeeecc-cccCCcHHHHHHHH-------
Confidence 344554 57899999999999999999999999887663221111100 000000000 00123445666665
Q ss_pred CcHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeeecCCceEEeeccCCCCCCChHHHHhcCCCHHH---HHHH
Q 002039 197 DFNSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQSSETVLILEFMDGIRLNDCESLEAFGVNKQK---VVEE 273 (977)
Q Consensus 197 d~~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~---l~~~ 273 (977)
..|.+|+.|+.. .++.+|+++.-..+||||+|+.+... ....+....+...+ +...
T Consensus 214 --EKE~RNLkRl~~------------------aGIP~PePIlLk~hVLVM~FlGrdgw-~aPkLKd~~ls~~ka~~~Y~~ 272 (520)
T KOG2270|consen 214 --EKEMRNLKRLNN------------------AGIPCPEPILLKNHVLVMEFLGRDGW-AAPKLKDASLSTSKARELYQQ 272 (520)
T ss_pred --HHHHHHHHHHHh------------------cCCCCCCceeeecceEeeeeccCCCC-cCcccccccCChHHHHHHHHH
Confidence 358899999865 25788998888889999999953211 11112222333333 2333
Q ss_pred HHHHHHHHHHhcCccccCCCCCCeEEccCCCCceEEEecccccccCHHHHHHHHHHHHHHHcCCHHHHHHHHHHcCcc
Q 002039 274 ITRAYAHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSSSMKQALAKMFFAAAEGDHVALLSAFAEMGLR 351 (977)
Q Consensus 274 l~~~~l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~~~r~~~~~l~~a~~~~d~~~~~~~~~~~g~~ 351 (977)
++...-......++||+||.--|+|+- +|.+.+||-+.....+...-..|. ..|...+-..|.++|+.
T Consensus 273 ~v~~MR~lY~~c~LVHADLSEfN~Lyh---dG~lyiIDVSQSVE~DHP~aldFL-------RmDc~NVn~FF~r~gv~ 340 (520)
T KOG2270|consen 273 CVRIMRRLYQKCRLVHADLSEFNLLYH---DGKLYIIDVSQSVEHDHPHALDFL-------RMDCNNVNDFFRRLGVA 340 (520)
T ss_pred HHHHHHHHHHHhceeccchhhhhheEE---CCEEEEEEccccccCCChhHHHHH-------HHHHHHHHHHHHHcCCe
Confidence 333322233458999999999999996 389999999999888776655543 44677888899999985
No 424
>KOG1027 consensus Serine/threonine protein kinase and endoribonuclease ERN1/IRE1, sensor of the unfolded protein response pathway [Signal transduction mechanisms]
Probab=98.62 E-value=2.5e-08 Score=117.92 Aligned_cols=77 Identities=26% Similarity=0.347 Sum_probs=54.4
Q ss_pred ceEEeeccCCCCCCChHHHH-----hcC-CCHHHHHHHHHHHHHHHHHhcCccccCCCCCCeEEcc---CCCCceEEEec
Q 002039 242 TVLILEFMDGIRLNDCESLE-----AFG-VNKQKVVEEITRAYAHQIYVDGFFNGDPHPGNFLVSK---DPPHRPILLDF 312 (977)
Q Consensus 242 ~vLVmE~i~G~~L~~~~~~~-----~~~-~~~~~l~~~l~~~~l~~i~~~G~~H~D~hPgNIlv~~---~~~g~i~LiDF 312 (977)
.|++.|.|. .+|.|+.... ..+ ++...+...++.. +.++|..+++|||+||.||||.. ++..+++|.||
T Consensus 578 ~YIalELC~-~sL~dlie~~~~d~~~~~~i~~~~~l~q~~~G-laHLHsl~iVHRDLkPQNILI~~~~~~~~~ra~iSDf 655 (903)
T KOG1027|consen 578 LYIALELCA-CSLQDLIESSGLDVEMQSDIDPISVLSQIASG-LAHLHSLKIVHRDLKPQNILISVPSADGTLRAKISDF 655 (903)
T ss_pred EEEEehHhh-hhHHHHHhccccchhhcccccHHHHHHHHHHH-HHHHHhcccccccCCCceEEEEccCCCcceeEEeccc
Confidence 588999985 5777764431 001 2333333333332 77899999999999999999986 33457899999
Q ss_pred ccccccCH
Q 002039 313 GLTKKLSS 320 (977)
Q Consensus 313 G~~~~l~~ 320 (977)
|++++++.
T Consensus 656 glsKkl~~ 663 (903)
T KOG1027|consen 656 GLSKKLAG 663 (903)
T ss_pred ccccccCC
Confidence 99999965
No 425
>KOG0690 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=98.61 E-value=3.6e-08 Score=104.80 Aligned_cols=144 Identities=17% Similarity=0.172 Sum_probs=89.7
Q ss_pred cccC-ccccccccccEEEEEEec-CCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhccccc
Q 002039 119 MDFV-ETPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKEL 196 (977)
Q Consensus 119 ~~~d-~~piasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~El 196 (977)
++|| -+.+|.|.||.|-.++-+ +|+.+||||++.++- +..| .+++.
T Consensus 168 ~dFdfLKvLGkGTFGKVIL~rEKat~k~YAiKIlkKevi--iakd-----EVAHT------------------------- 215 (516)
T KOG0690|consen 168 EDFDFLKVLGKGTFGKVILCREKATGKLYAIKILKKEVI--IAKD-----EVAHT------------------------- 215 (516)
T ss_pred chhhHHHHhcCCccceEEEEeecccCceeehhhhhhhhe--eehH-----Hhhhh-------------------------
Confidence 3454 378999999999999864 899999999876542 1111 01111
Q ss_pred CcHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCeEecee-ee-cCCceEEeeccCCCCCCChHHHHhcCCC--HHHHHH
Q 002039 197 DFNSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEV-IQ-SSETVLILEFMDGIRLNDCESLEAFGVN--KQKVVE 272 (977)
Q Consensus 197 d~~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v-~~-~~~~vLVmE~i~G~~L~~~~~~~~~~~~--~~~l~~ 272 (977)
..|-+.+...++-| +.--+. +. ..+.+.||||..|+.|--... +...++ +.+..-
T Consensus 216 --lTE~RVL~~~~HPF------------------Lt~LKYsFQt~drlCFVMeyanGGeLf~HLs-rer~FsE~RtRFYG 274 (516)
T KOG0690|consen 216 --LTENRVLQNCRHPF------------------LTSLKYSFQTQDRLCFVMEYANGGELFFHLS-RERVFSEDRTRFYG 274 (516)
T ss_pred --hhHHHHHHhccCcH------------------HHHhhhhhccCceEEEEEEEccCceEeeehh-hhhcccchhhhhhh
Confidence 11223333222211 000000 01 244578999999998863322 122233 333322
Q ss_pred HHHHHHHHHHHhcCccccCCCCCCeEEccCCCCceEEEecccccc
Q 002039 273 EITRAYAHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKK 317 (977)
Q Consensus 273 ~l~~~~l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~ 317 (977)
.-+-..+..+|..+|+-||+|-.|+|+++| |.|++.|||+|+.
T Consensus 275 aEIvsAL~YLHs~~ivYRDlKLENLlLDkD--GHIKitDFGLCKE 317 (516)
T KOG0690|consen 275 AEIVSALGYLHSRNIVYRDLKLENLLLDKD--GHIKITDFGLCKE 317 (516)
T ss_pred HHHHHHhhhhhhCCeeeeechhhhheeccC--CceEeeecccchh
Confidence 223334888999999999999999999977 9999999999974
No 426
>KOG1152 consensus Signal transduction serine/threonine kinase with PAS/PAC sensor domain [Signal transduction mechanisms]
Probab=98.60 E-value=1.2e-07 Score=107.95 Aligned_cols=150 Identities=20% Similarity=0.258 Sum_probs=85.5
Q ss_pred ccccccccccEEEEEEec-CCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCcHHH
Q 002039 123 ETPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSE 201 (977)
Q Consensus 123 ~~piasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~E 201 (977)
-+|+|+|.+|||..|+++ +...|+||.... +++..|. |.. .-++..+ .. |
T Consensus 566 lq~lG~GAyGkV~lai~K~n~~eVViK~I~K---eRIL~Dt-----------Wvr-DrkLGtV--------p~------E 616 (772)
T KOG1152|consen 566 LQPLGEGAYGKVNLAIHKENNYEVVIKMIFK---ERILVDT-----------WVR-DRKLGTV--------PS------E 616 (772)
T ss_pred eeeccccccceEEEeeecccceEEEeeehhh---hhhhhhh-----------hhc-ccccCcc--------ch------h
Confidence 379999999999999985 567899997643 2333222 211 0111111 11 2
Q ss_pred HHHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeee-cCCceEEeecc-CCCCCCChHHHHhcCCCHH--HHHHHHHHH
Q 002039 202 AENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFM-DGIRLNDCESLEAFGVNKQ--KVVEEITRA 277 (977)
Q Consensus 202 a~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLVmE~i-~G~~L~~~~~~~~~~~~~~--~l~~~l~~~ 277 (977)
.+-+..+..+-. ...+++-..++ ....+|+||-- +|+.|-++...+ ..++.. ++.-.-+.+
T Consensus 617 IqIla~l~~~sH--------------~NIlKlLdfFEddd~yyl~te~hg~gIDLFd~IE~k-p~m~E~eAk~IFkQV~a 681 (772)
T KOG1152|consen 617 IQILATLNKHSH--------------ENILKLLDFFEDDDYYYLETEVHGEGIDLFDFIEFK-PRMDEPEAKLIFKQVVA 681 (772)
T ss_pred HHHHHHhhhcCc--------------cchhhhhheeecCCeeEEEecCCCCCcchhhhhhcc-CccchHHHHHHHHHHHh
Confidence 222222221100 01122222222 33447888864 466665654432 122222 222223333
Q ss_pred HHHHHHhcCccccCCCCCCeEEccCCCCceEEEeccccccc
Q 002039 278 YAHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKL 318 (977)
Q Consensus 278 ~l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l 318 (977)
-.+.+|..||+|||+|-+|++|+.+ |-++|||||.+...
T Consensus 682 gi~hlh~~~ivhrdikdenvivd~~--g~~klidfgsaa~~ 720 (772)
T KOG1152|consen 682 GIKHLHDQGIVHRDIKDENVIVDSN--GFVKLIDFGSAAYT 720 (772)
T ss_pred ccccccccCceecccccccEEEecC--CeEEEeeccchhhh
Confidence 4778899999999999999999854 89999999987543
No 427
>KOG4279 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=98.60 E-value=9.4e-08 Score=110.20 Aligned_cols=76 Identities=17% Similarity=0.137 Sum_probs=56.5
Q ss_pred eEEeeccCCCCCCChHHHHhcCC--CHHHHHHHHHHHH--HHHHHhcCccccCCCCCCeEEccCCCCceEEEeccccccc
Q 002039 243 VLILEFMDGIRLNDCESLEAFGV--NKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKL 318 (977)
Q Consensus 243 vLVmE~i~G~~L~~~~~~~~~~~--~~~~l~~~l~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l 318 (977)
-+-||-++|++|+++....-..+ +...+....-+++ ++.+|+..|||||||-.|+||+.- .|-+++.|||.++++
T Consensus 648 kIFMEqVPGGSLSsLLrskWGPlKDNEstm~fYtkQILeGLkYLHen~IVHRDIKGDNVLvNTy-SGvlKISDFGTsKRL 726 (1226)
T KOG4279|consen 648 KIFMEQVPGGSLSSLLRSKWGPLKDNESTMNFYTKQILEGLKYLHENKIVHRDIKGDNVLVNTY-SGVLKISDFGTSKRL 726 (1226)
T ss_pred EEEeecCCCCcHHHHHHhccCCCccchhHHHHHHHHHHHHhhhhhhcceeeccccCCcEEEeec-cceEEecccccchhh
Confidence 36899999999998865332222 2333333333333 778899999999999999999865 488999999999877
Q ss_pred C
Q 002039 319 S 319 (977)
Q Consensus 319 ~ 319 (977)
.
T Consensus 727 A 727 (1226)
T KOG4279|consen 727 A 727 (1226)
T ss_pred c
Confidence 3
No 428
>KOG2345 consensus Serine/threonine protein kinase/TGF-beta stimulated factor [Transcription; Lipid transport and metabolism; Signal transduction mechanisms]
Probab=98.60 E-value=8e-08 Score=99.32 Aligned_cols=79 Identities=19% Similarity=0.226 Sum_probs=61.3
Q ss_pred cCCceEEeeccCCCCCCChHHHHh---cCCCHHHHHHHHHHHH--HHHHHhcC--ccccCCCCCCeEEccCCCCceEEEe
Q 002039 239 SSETVLILEFMDGIRLNDCESLEA---FGVNKQKVVEEITRAY--AHQIYVDG--FFNGDPHPGNFLVSKDPPHRPILLD 311 (977)
Q Consensus 239 ~~~~vLVmE~i~G~~L~~~~~~~~---~~~~~~~l~~~l~~~~--l~~i~~~G--~~H~D~hPgNIlv~~~~~g~i~LiD 311 (977)
+...+|+..|..-++|.+...... .-++..+++.....++ ++++|... +.|+|+||+||++.++ +.++|.|
T Consensus 95 ~~~~yll~Pyy~~Gsl~d~i~~~k~kg~~~sE~~iL~if~gic~gL~~lH~~~~~yAH~DiKP~NILls~~--~~~vl~D 172 (302)
T KOG2345|consen 95 KHEAYLLLPYYKRGSLLDEIERLKIKGNFVSEAQILWIFLGICRGLEALHEKEPPYAHRDIKPANILLSDS--GLPVLMD 172 (302)
T ss_pred ceeEEEEeehhccccHHHHHHHHhhcCCccCHHHHHHHHHHHHHHHHHHhccCCcccccCCCcceeEecCC--CceEEEe
Confidence 345689999987777766544322 2356677777776666 99999998 9999999999999864 8999999
Q ss_pred cccccccC
Q 002039 312 FGLTKKLS 319 (977)
Q Consensus 312 FG~~~~l~ 319 (977)
||.+...+
T Consensus 173 ~GS~~~a~ 180 (302)
T KOG2345|consen 173 LGSATQAP 180 (302)
T ss_pred ccCccccc
Confidence 99998764
No 429
>KOG0033 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]
Probab=98.59 E-value=4e-09 Score=108.19 Aligned_cols=141 Identities=20% Similarity=0.253 Sum_probs=83.8
Q ss_pred ccccccccEEEEEEe-cCCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCcHHHHH
Q 002039 125 PLATASIAQVHRATL-VDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEAE 203 (977)
Q Consensus 125 piasaSigqV~~A~l-~~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea~ 203 (977)
-||.|.|+.|||... .+|+..|+|+..-.. .-..|. + ++.+|++
T Consensus 18 ~igkG~FSvVrRc~~~~tg~~fa~kiin~~k--~~~~~~-----------------------e----------~l~rEar 62 (355)
T KOG0033|consen 18 ELGKGAFSVVRRCVHKTTGLEFAAKIINTKK--LSARDF-----------------------Q----------KLEREAR 62 (355)
T ss_pred HHccCchHHHHHHHhccchHHHHHHHhhhhh--hccccH-----------------------H----------HHHHHHH
Confidence 489999999999986 489999999653110 000000 0 2345655
Q ss_pred HHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeee-cCCceEEeeccCCCCCCChHHHHhcCCC---HHHHHHHHHHHHH
Q 002039 204 NTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAFGVN---KQKVVEEITRAYA 279 (977)
Q Consensus 204 n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLVmE~i~G~~L~~~~~~~~~~~~---~~~l~~~l~~~~l 279 (977)
-...+++ ...+..-+-+. .+-++||.|+++|..|-.-.. .+.-.+ .....+.++++ +
T Consensus 63 IC~~LqH-----------------P~IvrL~~ti~~~~~~ylvFe~m~G~dl~~eIV-~R~~ySEa~aSH~~rQiLea-l 123 (355)
T KOG0033|consen 63 ICRKLQH-----------------PNIVRLHDSIQEESFHYLVFDLVTGGELFEDIV-AREFYSEADASHCIQQILEA-L 123 (355)
T ss_pred HHHhcCC-----------------CcEeehhhhhcccceeEEEEecccchHHHHHHH-HHHHHHHHHHHHHHHHHHHH-H
Confidence 4444332 11122222222 456799999999987642211 111111 11122222222 4
Q ss_pred HHHHhcCccccCCCCCCeEEccCCC-CceEEEecccccccC
Q 002039 280 HQIYVDGFFNGDPHPGNFLVSKDPP-HRPILLDFGLTKKLS 319 (977)
Q Consensus 280 ~~i~~~G~~H~D~hPgNIlv~~~~~-g~i~LiDFG~~~~l~ 319 (977)
...|..||+|||+||.|+++....+ .-++|.|||++..++
T Consensus 124 ~yCH~n~IvHRDvkP~nllLASK~~~A~vKL~~FGvAi~l~ 164 (355)
T KOG0033|consen 124 AYCHSNGIVHRDLKPENLLLASKAKGAAVKLADFGLAIEVN 164 (355)
T ss_pred HHHHhcCceeccCChhheeeeeccCCCceeecccceEEEeC
Confidence 5567799999999999999975433 358999999999987
No 430
>KOG0666 consensus Cyclin C-dependent kinase CDK8 [Transcription]
Probab=98.56 E-value=8.1e-08 Score=101.88 Aligned_cols=78 Identities=19% Similarity=0.281 Sum_probs=51.0
Q ss_pred ceEEeeccCCCCCCChHHHH----hcCCCHHHHHHHHHHHH--HHHHHhcCccccCCCCCCeEEccC--CCCceEEEecc
Q 002039 242 TVLILEFMDGIRLNDCESLE----AFGVNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKD--PPHRPILLDFG 313 (977)
Q Consensus 242 ~vLVmE~i~G~~L~~~~~~~----~~~~~~~~l~~~l~~~~--l~~i~~~G~~H~D~hPgNIlv~~~--~~g~i~LiDFG 313 (977)
-+|+.||.|- .|..+.... ...+.+.-+-..+.+++ +..+|..=++|||+||.||||..+ +.|+++|.|||
T Consensus 103 v~l~fdYAEh-DL~~II~fHr~~~~~~lp~~mvKsilwQil~Gv~YLH~NWvlHRDLKPaNIlvmgdgperG~VKIaDlG 181 (438)
T KOG0666|consen 103 VWLLFDYAEH-DLWHIIKFHRASKAKQLPRSMVKSILWQILDGVHYLHSNWVLHRDLKPANILVMGDGPERGRVKIADLG 181 (438)
T ss_pred EEEEehhhhh-hHHHHHHHhccchhccCCHHHHHHHHHHHHhhhHHHhhhheeeccCCcceEEEeccCCccCeeEeeccc
Confidence 4689999972 222222211 11233333333444444 666788889999999999999854 24899999999
Q ss_pred cccccCH
Q 002039 314 LTKKLSS 320 (977)
Q Consensus 314 ~~~~l~~ 320 (977)
+++.+..
T Consensus 182 laR~~~~ 188 (438)
T KOG0666|consen 182 LARLFNN 188 (438)
T ss_pred HHHHhhc
Confidence 9887643
No 431
>KOG1025 consensus Epidermal growth factor receptor EGFR and related tyrosine kinases [Signal transduction mechanisms]
Probab=98.54 E-value=7.4e-08 Score=113.25 Aligned_cols=84 Identities=20% Similarity=0.162 Sum_probs=71.1
Q ss_pred cCCceEEeeccCCCCCCChHHHHhcCCCHHHHHHHHHHHH--HHHHHhcCccccCCCCCCeEEccCCCCceEEEeccccc
Q 002039 239 SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTK 316 (977)
Q Consensus 239 ~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~ 316 (977)
.+.--||++|++++.|.|+....+..+..+.++....++. ++.|++++++||||-..||||..- ..+++.|||+++
T Consensus 769 ~s~~qlvtq~mP~G~LlDyvr~hr~~igsq~lLnw~~QIAkgM~YLe~qrlVHrdLaaRNVLVksP--~hvkitdfgla~ 846 (1177)
T KOG1025|consen 769 LSTLQLVTQLMPLGCLLDYVREHRDNIGSQDLLNWCYQIAKGMKYLEEQRLVHRDLAARNVLVKSP--NHVKITDFGLAK 846 (1177)
T ss_pred cchHHHHHHhcccchHHHHHHHhhccccHHHHHHHHHHHHHHHHHHHhcchhhhhhhhhheeecCC--CeEEEEecchhh
Confidence 3446689999999999999887777777888888888776 888999999999999999999853 689999999999
Q ss_pred ccCHHHHH
Q 002039 317 KLSSSMKQ 324 (977)
Q Consensus 317 ~l~~~~r~ 324 (977)
-+..+..+
T Consensus 847 ll~~d~~e 854 (1177)
T KOG1025|consen 847 LLAPDEKE 854 (1177)
T ss_pred ccCccccc
Confidence 88765544
No 432
>KOG1151 consensus Tousled-like protein kinase [Signal transduction mechanisms]
Probab=98.52 E-value=2.1e-07 Score=102.50 Aligned_cols=83 Identities=18% Similarity=0.231 Sum_probs=53.5
Q ss_pred cCCceEEeeccCCCCCCChHHHHhcCCCHHHHHHHHHHHH--HHHHH--hcCccccCCCCCCeEEcc-CCCCceEEEecc
Q 002039 239 SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--AHQIY--VDGFFNGDPHPGNFLVSK-DPPHRPILLDFG 313 (977)
Q Consensus 239 ~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~--l~~i~--~~G~~H~D~hPgNIlv~~-~~~g~i~LiDFG 313 (977)
+..-+-|+|||+|-.|+-+.... .-++.++.-.++.+++ +..+- ..-|+|-|+||||||+-. ...|.|+|.|||
T Consensus 540 tdsFCTVLEYceGNDLDFYLKQh-klmSEKEARSIiMQiVnAL~YLNEikpPIIHYDLKPgNILLv~GtacGeIKITDFG 618 (775)
T KOG1151|consen 540 TDSFCTVLEYCEGNDLDFYLKQH-KLMSEKEARSIIMQIVNALKYLNEIKPPIIHYDLKPGNILLVNGTACGEIKITDFG 618 (775)
T ss_pred cccceeeeeecCCCchhHHHHhh-hhhhHHHHHHHHHHHHHHHHHHhccCCCeeeeccCCccEEEecCcccceeEeeecc
Confidence 34457899999999987664321 1122233222233322 33332 357999999999998753 224789999999
Q ss_pred cccccCHHH
Q 002039 314 LTKKLSSSM 322 (977)
Q Consensus 314 ~~~~l~~~~ 322 (977)
+.+.++++.
T Consensus 619 LSKIMdddS 627 (775)
T KOG1151|consen 619 LSKIMDDDS 627 (775)
T ss_pred hhhhccCCc
Confidence 998876643
No 433
>PF06293 Kdo: Lipopolysaccharide kinase (Kdo/WaaP) family; InterPro: IPR010440 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents lipopolysaccharide kinases which are related to protein kinases IPR000719 from INTERPRO. This family includes waaP (rfaP) gene product is required for the addition of phosphate to O-4 of the first heptose residue of the lipopolysaccharide (LPS) inner core region. It has previously been shown that WaaP is necessary for resistance to hydrophobic and polycationic antimicrobials in E. coli and that it is required for virulence in invasive strains of Salmonella enterica [].; GO: 0005524 ATP binding, 0016773 phosphotransferase activity, alcohol group as acceptor, 0009103 lipopolysaccharide biosynthetic process, 0016020 membrane
Probab=98.51 E-value=2.4e-07 Score=97.53 Aligned_cols=104 Identities=21% Similarity=0.293 Sum_probs=72.3
Q ss_pred CcHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeee--c------CCceEEeeccCCC-CCCChHHHHh--cCC
Q 002039 197 DFNSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ--S------SETVLILEFMDGI-RLNDCESLEA--FGV 265 (977)
Q Consensus 197 d~~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~--~------~~~vLVmE~i~G~-~L~~~~~~~~--~~~ 265 (977)
...+|.+++.++.+ .++.+|+++. . .+.+|+||+++|. +|.++..... ...
T Consensus 57 ra~~E~~~~~~L~~------------------~Gi~tP~pva~~~~r~~~~~~s~lite~l~~~~~L~~~~~~~~~~~~~ 118 (206)
T PF06293_consen 57 RAKREWRNLQRLRE------------------AGIPTPEPVAYGERRKGGGYRSYLITEALPGAQDLRDLLQQWEQLDPS 118 (206)
T ss_pred HHHHHHHHHHHHHH------------------cCCCCCcEEEEEEEcCCCceeEEEEEEeCCCcccHHHHHHhhcccchh
Confidence 46678889988875 2577888764 1 2348999999984 6766533200 011
Q ss_pred CHHHHHHHHHHHHHHHHHhcCccccCCCCCCeEEccCC-CCceEEEecccccccC
Q 002039 266 NKQKVVEEITRAYAHQIYVDGFFNGDPHPGNFLVSKDP-PHRPILLDFGLTKKLS 319 (977)
Q Consensus 266 ~~~~l~~~l~~~~l~~i~~~G~~H~D~hPgNIlv~~~~-~g~i~LiDFG~~~~l~ 319 (977)
....+...+.+ ++..+|..|++|+|++|+||||+.++ ..++.||||+-+..-.
T Consensus 119 ~~~~ll~~l~~-~i~~lH~~gi~H~Dl~~~NILv~~~~~~~~~~lIDld~~~~~~ 172 (206)
T PF06293_consen 119 QRRELLRALAR-LIAKLHDAGIYHGDLNPSNILVDPDDGQYRFYLIDLDRMRFRP 172 (206)
T ss_pred hHHHHHHHHHH-HHHHHHHCcCCCCCCCcccEEEeCCCCceeEEEEcchhceeCC
Confidence 23344444444 37789999999999999999999662 2379999999887655
No 434
>PRK10593 hypothetical protein; Provisional
Probab=98.50 E-value=1.1e-06 Score=97.76 Aligned_cols=93 Identities=15% Similarity=0.172 Sum_probs=65.7
Q ss_pred HHHHHHHHHHhCCChhhcccccCccccccccccEEEEEEecCCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCC
Q 002039 100 QEVSQTIEREFGESMGGMFMDFVETPLATASIAQVHRATLVDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQY 179 (977)
Q Consensus 100 ~~v~~~l~~elg~~~~~~f~~~d~~piasaSigqV~~A~l~~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~ 179 (977)
+.+++.+.+.+|..+.+ .++|+.|.+++||+....+| .++||+.+......
T Consensus 2 ~~~~~~~~~~~~~~~~~------~~~i~~G~~~~vy~~~~~~~-~~~~k~~~~~~~~~---------------------- 52 (297)
T PRK10593 2 EQLRAELSHLLGEKLSR------VECISEQPYAALWALYDSQG-NPMPLMARSFSTPG---------------------- 52 (297)
T ss_pred hHHHHHHHHHhchhhhe------eeecCCccceeEEEEEcCCC-CEEEEEecccccch----------------------
Confidence 45667777777764443 37999999999999987555 57889864321110
Q ss_pred CCchhHHHHhhhcccccCcHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeee-c------CCceEEeeccCCC
Q 002039 180 DFNPIIDEWCKEAPKELDFNSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-S------SETVLILEFMDGI 252 (977)
Q Consensus 180 ~~~~~~~e~~~~l~~Eld~~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~------~~~vLVmE~i~G~ 252 (977)
.|..|+++++.+++. ..+.||+|+. + +..+||||+++|.
T Consensus 53 -----------------~~~~Ea~~L~~L~~~-----------------~~vpVP~V~~~~~~~~~~g~~~LVmE~i~G~ 98 (297)
T PRK10593 53 -----------------VAQQEAWKLSMLARS-----------------GTVRMPTVYGVMTHEQSPGPDVLLLERLRGV 98 (297)
T ss_pred -----------------HHHHHHHHHHHHccC-----------------CCCCcCcEEEEeccCCcCCCeEEEEeccCCE
Confidence 245788888887541 2478999995 2 4479999999998
Q ss_pred CCC
Q 002039 253 RLN 255 (977)
Q Consensus 253 ~L~ 255 (977)
++.
T Consensus 99 ~~~ 101 (297)
T PRK10593 99 SVE 101 (297)
T ss_pred ecC
Confidence 773
No 435
>KOG0695 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=98.46 E-value=1.8e-07 Score=99.74 Aligned_cols=76 Identities=16% Similarity=0.197 Sum_probs=55.4
Q ss_pred cCCceEEeeccCCCCCCChHHHHhcCCCH--HHHHHHHHHHHHHHHHhcCccccCCCCCCeEEccCCCCceEEEeccccc
Q 002039 239 SSETVLILEFMDGIRLNDCESLEAFGVNK--QKVVEEITRAYAHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTK 316 (977)
Q Consensus 239 ~~~~vLVmE~i~G~~L~~~~~~~~~~~~~--~~l~~~l~~~~l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~ 316 (977)
.++.+.|.||++|+.|--... +...+.. .++...-+-+.+..+|+.||+-||+|-.|+|++.+ |.|+|.|+||++
T Consensus 323 esrlffvieyv~ggdlmfhmq-rqrklpeeharfys~ei~lal~flh~rgiiyrdlkldnvlldae--ghikltdygmck 399 (593)
T KOG0695|consen 323 ESRLFFVIEYVNGGDLMFHMQ-RQRKLPEEHARFYSAEICLALNFLHERGIIYRDLKLDNVLLDAE--GHIKLTDYGMCK 399 (593)
T ss_pred cceEEEEEEEecCcceeeehh-hhhcCcHHHhhhhhHHHHHHHHHHhhcCeeeeeccccceEEccC--Cceeecccchhh
Confidence 466789999999998863321 1112221 22222333345888999999999999999999966 999999999997
Q ss_pred c
Q 002039 317 K 317 (977)
Q Consensus 317 ~ 317 (977)
.
T Consensus 400 e 400 (593)
T KOG0695|consen 400 E 400 (593)
T ss_pred c
Confidence 5
No 436
>KOG1345 consensus Serine/threonine kinase [Signal transduction mechanisms]
Probab=98.40 E-value=1.1e-06 Score=91.98 Aligned_cols=77 Identities=27% Similarity=0.345 Sum_probs=55.8
Q ss_pred CceEEeeccCCCCCCChHHHHhcCCC---HHHHHHHHHHHHHHHHHhcCccccCCCCCCeEEccCCCCceEEEecccccc
Q 002039 241 ETVLILEFMDGIRLNDCESLEAFGVN---KQKVVEEITRAYAHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKK 317 (977)
Q Consensus 241 ~~vLVmE~i~G~~L~~~~~~~~~~~~---~~~l~~~l~~~~l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~ 317 (977)
-.|.||||++-++|..-. ...|+. .+++.+.+..+ +..+|..++||||+|..||||=....-+|+|+|||....
T Consensus 96 ~YvF~qE~aP~gdL~snv--~~~GigE~~~K~v~~ql~SA-i~fMHsknlVHRdlK~eNiLif~~df~rvKlcDFG~t~k 172 (378)
T KOG1345|consen 96 AYVFVQEFAPRGDLRSNV--EAAGIGEANTKKVFAQLLSA-IEFMHSKNLVHRDLKAENILIFDADFYRVKLCDFGLTRK 172 (378)
T ss_pred eEEEeeccCccchhhhhc--CcccccHHHHHHHHHHHHHH-HHHhhccchhhcccccceEEEecCCccEEEeeecccccc
Confidence 347899999987776542 233433 23444444443 778899999999999999998543345899999999887
Q ss_pred cCH
Q 002039 318 LSS 320 (977)
Q Consensus 318 l~~ 320 (977)
...
T Consensus 173 ~g~ 175 (378)
T KOG1345|consen 173 VGT 175 (378)
T ss_pred cCc
Confidence 654
No 437
>KOG1026 consensus Nerve growth factor receptor TRKA and related tyrosine kinases [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport]
Probab=98.40 E-value=2.7e-07 Score=110.25 Aligned_cols=140 Identities=21% Similarity=0.251 Sum_probs=99.5
Q ss_pred cccccccccEEEEEEec------CCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccC
Q 002039 124 TPLATASIAQVHRATLV------DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELD 197 (977)
Q Consensus 124 ~piasaSigqV~~A~l~------~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld 197 (977)
+-+|.|.||.||+|+.. +-+-||||-++.....+ ...|
T Consensus 492 ~eLGegaFGkVf~a~~~~l~p~~~~~lVAVK~LKd~a~~~------------------------------------~~~d 535 (774)
T KOG1026|consen 492 EELGEGAFGKVFLAEAYGLLPGQDEQLVAVKALKDKAENQ------------------------------------ARQD 535 (774)
T ss_pred hhhcCchhhhhhhhhccCCCCCccceehhHhhhcccccHH------------------------------------HHHH
Confidence 56899999999999863 34669999765433322 2247
Q ss_pred cHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeee-cCCceEEeeccCCCCCCChHHHHhc-------C-----
Q 002039 198 FNSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAF-------G----- 264 (977)
Q Consensus 198 ~~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLVmE~i~G~~L~~~~~~~~~-------~----- 264 (977)
|++||+-+..|.| ...|++--|.. ....++|.||+.-++|.++...... +
T Consensus 536 F~REaeLla~l~H-----------------~nIVrLlGVC~~~~P~~MvFEYm~~GDL~eFLra~sP~a~~~~~g~~~~~ 598 (774)
T KOG1026|consen 536 FRREAELLAELQH-----------------PNIVRLLGVCREGDPLCMVFEYMDHGDLHEFLRARSPKADKLASGQDTPP 598 (774)
T ss_pred HHHHHHHHHhccC-----------------CCeEEEEEEEccCCeeEEEEEecccccHHHHHHhhCCccccccCCCCCCC
Confidence 8889988777754 11233322322 3556899999999999887543221 1
Q ss_pred -CCHHHHHHHHHHHH--HHHHHhcCccccCCCCCCeEEccCCCCceEEEeccccccc
Q 002039 265 -VNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKL 318 (977)
Q Consensus 265 -~~~~~l~~~l~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l 318 (977)
++..+++....++. +..|-.+-||||||--.|.||.+. ..|+|.|||+++.+
T Consensus 599 ~L~~~q~L~iA~QIAaGM~YLs~~~FVHRDLATRNCLVge~--l~VKIsDfGLsRdi 653 (774)
T KOG1026|consen 599 PLSTSQFLHIATQIAAGMEYLSSHHFVHRDLATRNCLVGEN--LVVKISDFGLSRDI 653 (774)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHhCcccccchhhhhceeccc--eEEEecccccchhh
Confidence 34556666666655 677778999999999999999855 78999999999865
No 438
>PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional
Probab=98.39 E-value=1e-06 Score=114.25 Aligned_cols=129 Identities=15% Similarity=0.156 Sum_probs=78.7
Q ss_pred ccccccccccEEEEEEe-cCCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCcHHH
Q 002039 123 ETPLATASIAQVHRATL-VDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSE 201 (977)
Q Consensus 123 ~~piasaSigqV~~A~l-~~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~E 201 (977)
.+.||.|++|.||+|+. .+|+.||||..+.... ....|
T Consensus 695 ~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~-----------------------------------------~~~~~ 733 (968)
T PLN00113 695 ENVISRGKKGASYKGKSIKNGMQFVVKEINDVNS-----------------------------------------IPSSE 733 (968)
T ss_pred ccEEccCCCeeEEEEEECCCCcEEEEEEccCCcc-----------------------------------------ccHHH
Confidence 35799999999999997 5899999997542110 00112
Q ss_pred HHHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeee-cCCceEEeeccCCCCCCChHHHHhcCCCHHHHHHHHHHHH--
Q 002039 202 AENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY-- 278 (977)
Q Consensus 202 a~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~-- 278 (977)
.+.+.+++| ..-+.+-.++. ....++||||++|.+|.++.. ..+.......+.++.
T Consensus 734 ~~~l~~l~H-----------------pnIv~~~~~~~~~~~~~lv~Ey~~~g~L~~~l~----~l~~~~~~~i~~~ia~~ 792 (968)
T PLN00113 734 IADMGKLQH-----------------PNIVKLIGLCRSEKGAYLIHEYIEGKNLSEVLR----NLSWERRRKIAIGIAKA 792 (968)
T ss_pred HHHHhhCCC-----------------CCcceEEEEEEcCCCCEEEEeCCCCCcHHHHHh----cCCHHHHHHHHHHHHHH
Confidence 222222211 11122222222 455789999999999987742 233333333333332
Q ss_pred HHHHH---hcCccccCCCCCCeEEccCCCCceEEEeccccc
Q 002039 279 AHQIY---VDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTK 316 (977)
Q Consensus 279 l~~i~---~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~ 316 (977)
+..+| ..+++|||+||.||+++.+ +..++ +||..+
T Consensus 793 L~yLH~~~~~~iiH~dlkp~Nil~~~~--~~~~~-~~~~~~ 830 (968)
T PLN00113 793 LRFLHCRCSPAVVVGNLSPEKIIIDGK--DEPHL-RLSLPG 830 (968)
T ss_pred HHHhccCCCCCeecCCCCHHhEEECCC--CceEE-Eecccc
Confidence 66777 5699999999999999865 44443 355543
No 439
>TIGR02172 Fb_sc_TIGR02172 Fibrobacter succinogenes paralogous family TIGR02172. This model describes a paralogous family of five proteins, likely to be enzymes, in the rumen bacterium Fibrobacter succinogenes S85. Members show homology to proteins described by PFAM model pfam01636, a phosphotransferase enzyme family associated with resistance to aminoglycoside antibiotics. However, members of this family score below the current trusted and noise cutoffs for pfam01636.
Probab=98.38 E-value=2.2e-06 Score=91.54 Aligned_cols=32 Identities=22% Similarity=0.264 Sum_probs=26.7
Q ss_pred cCccccCCCCCCeEEccCCCCceEEEecccccccC
Q 002039 285 DGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 319 (977)
Q Consensus 285 ~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~ 319 (977)
..++|+|+||+||+++++ + +.+|||+.++.=+
T Consensus 153 ~~~~HgD~~~~Nii~~~~--~-~~iIDwe~a~~Gd 184 (226)
T TIGR02172 153 STCLHGDFQIGNLITSGK--G-TYWIDLGDFGYGN 184 (226)
T ss_pred CceEecCCCCCcEEEcCC--C-cEEEechhcCcCC
Confidence 467899999999999854 5 9999999887543
No 440
>KOG2268 consensus Serine/threonine protein kinase [Signal transduction mechanisms; General function prediction only]
Probab=98.32 E-value=1.1e-06 Score=94.65 Aligned_cols=181 Identities=14% Similarity=0.236 Sum_probs=120.8
Q ss_pred cccccccccEEEEEEecCCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCcHHHHH
Q 002039 124 TPLATASIAQVHRATLVDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEAE 203 (977)
Q Consensus 124 ~piasaSigqV~~A~l~~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea~ 203 (977)
+-||-|--+-||.+...+|++.++|+-|-|-.. ++.++. -...+...-...++ -...+.-.+|..
T Consensus 98 nqIGVGKESDIY~v~d~~G~~~~lK~HRLGRtS-----FR~Vk~---kRDY~r~r~~~sWl-------yLSRlaa~kEfa 162 (465)
T KOG2268|consen 98 NQIGVGKESDIYVVADEEGNPLILKLHRLGRTS-----FRNVKN---KRDYLRKRKSGSWL-------YLSRLAATKEFA 162 (465)
T ss_pred cccccccccceEEEecCCCCchhHHHHhhhhhh-----HHHhhh---hhhhHhcCCccchh-------hhHHHHHHHHHH
Confidence 458889999999999999999999987654221 111111 00000000001111 112233455666
Q ss_pred HHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeeecCCceEEeeccCCCCCCChHHHHhcCCCHHHHHHHHHHHHHHHHH
Q 002039 204 NTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQSSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAYAHQIY 283 (977)
Q Consensus 204 n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~l~~i~ 283 (977)
-++.|.+ ..+.||+++.+++++.|||+++|.+|..+.. -.++..+...++.++. -+-
T Consensus 163 fmkaL~e------------------~gfpVPkpiD~~RH~Vvmelv~g~Pl~~v~~----v~d~~~ly~~lm~~Iv-~la 219 (465)
T KOG2268|consen 163 FMKALYE------------------RGFPVPKPIDHNRHCVVMELVDGYPLRQVRH----VEDPPTLYDDLMGLIV-RLA 219 (465)
T ss_pred HHHHHHH------------------cCCCCCCcccccceeeHHHhhcccceeeeee----cCChHHHHHHHHHHHH-HHH
Confidence 6666654 2578999999999999999999999987633 2356667766666543 556
Q ss_pred hcCccccCCCCCCeEEccCCCCceEEEecccccccCHHHHHHHHHHHHHHHcCCHHHHHHHHH-HcCcc
Q 002039 284 VDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSSSMKQALAKMFFAAAEGDHVALLSAFA-EMGLR 351 (977)
Q Consensus 284 ~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~~~r~~~~~l~~a~~~~d~~~~~~~~~-~~g~~ 351 (977)
.+|+||||-.--||||+++ ++|++|||-.+...+.+.-..| ..+|.+=+...|. +.|..
T Consensus 220 ~~GlIHgDFNEFNimv~dd--~~i~vIDFPQmvS~sh~nA~~Y-------FdRDv~Ci~~fFrKkf~YE 279 (465)
T KOG2268|consen 220 NHGLIHGDFNEFNIMVKDD--DKIVVIDFPQMVSTSHPNAEYY-------FDRDVECIRAFFRKKFGYE 279 (465)
T ss_pred HcCceecccchheeEEecC--CCEEEeechHhhccCCCcccee-------ecccHHHHHHHHHHhcCCC
Confidence 8999999999999999965 8899999999888876654443 3566666666654 34554
No 441
>KOG4257 consensus Focal adhesion tyrosine kinase FAK, contains FERM domain [Signal transduction mechanisms]
Probab=98.31 E-value=1.1e-06 Score=100.82 Aligned_cols=141 Identities=18% Similarity=0.157 Sum_probs=93.6
Q ss_pred cccccccccEEEEEEec---CCC--EEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCc
Q 002039 124 TPLATASIAQVHRATLV---DGR--QVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDF 198 (977)
Q Consensus 124 ~piasaSigqV~~A~l~---~G~--~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~ 198 (977)
+.||.|-||-||+|+.. .|+ -||||.=+.+..-. . --.|
T Consensus 395 r~iG~GqFGdVy~gvYt~~~kge~iaVAvKtCK~d~t~d-------------------------~-----------tekf 438 (974)
T KOG4257|consen 395 RLIGEGQFGDVYKGVYTDPEKGERIAVAVKTCKTDCTPD-------------------------D-----------TEKF 438 (974)
T ss_pred HhhcCCcccceeeeEecccccCcceeeeeehhccCCChh-------------------------h-----------HHHH
Confidence 67999999999999963 344 37888644322100 0 0036
Q ss_pred HHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeee---cCCceEEeeccCCCCCCChHHHHhcCCCHHHHHHHHH
Q 002039 199 NSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ---SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEIT 275 (977)
Q Consensus 199 ~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~---~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~ 275 (977)
..||--++.|.+ .+|-+.+. ...-+||||..+=+.|..+...+...++...+.....
T Consensus 439 lqEa~iMrnfdH--------------------phIikLIGv~~e~P~WivmEL~~~GELr~yLq~nk~sL~l~tL~ly~~ 498 (974)
T KOG4257|consen 439 LQEASIMRNFDH--------------------PHIIKLIGVCVEQPMWIVMELAPLGELREYLQQNKDSLPLRTLTLYCY 498 (974)
T ss_pred HHHHHHHHhCCC--------------------cchhheeeeeeccceeEEEecccchhHHHHHHhccccchHHHHHHHHH
Confidence 678766665543 22333332 3445899999987777777554444444443333333
Q ss_pred HHH--HHHHHhcCccccCCCCCCeEEccCCCCceEEEecccccccCHHH
Q 002039 276 RAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSSSM 322 (977)
Q Consensus 276 ~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~~~ 322 (977)
++. +..++...||||||-..||||... .-++|.|||+.+.++++.
T Consensus 499 Qi~talaYLeSkrfVHRDIAaRNiLVsSp--~CVKLaDFGLSR~~ed~~ 545 (974)
T KOG4257|consen 499 QICTALAYLESKRFVHRDIAARNILVSSP--QCVKLADFGLSRYLEDDA 545 (974)
T ss_pred HHHHHHHHHHhhchhhhhhhhhheeecCc--ceeeecccchhhhccccc
Confidence 332 667788999999999999999854 679999999999887654
No 442
>KOG0665 consensus Jun-N-terminal kinase (JNK) [Signal transduction mechanisms]
Probab=98.30 E-value=5.7e-07 Score=96.27 Aligned_cols=76 Identities=22% Similarity=0.413 Sum_probs=58.4
Q ss_pred CCceEEeeccCCCCCCChHHHHhcCCCHHHHHHHHHHHH--HHHHHhcCccccCCCCCCeEEccCCCCceEEEecccccc
Q 002039 240 SETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKK 317 (977)
Q Consensus 240 ~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~ 317 (977)
.+-++|||++++ +|..... ...|-+.+...+.+.+ ++.+|..||+|||+||.||+|..+ ..++++|||.+..
T Consensus 94 ~e~y~v~e~m~~-nl~~vi~---~elDH~tis~i~yq~~~~ik~lhs~~IihRdLkPsnivv~~~--~~lKi~dfg~ar~ 167 (369)
T KOG0665|consen 94 QEVYLVMELMDA-NLCQVIL---MELDHETISYILYQMLCGIKHLHSAGIIHRDLKPSNIVVNSD--CTLKILDFGLART 167 (369)
T ss_pred HhHHHHHHhhhh-HHHHHHH---HhcchHHHHHHHHHHHHHHHHHHhcceeecccCcccceecch--hheeeccchhhcc
Confidence 344799999974 4444433 3345566666666654 888999999999999999999866 8899999999987
Q ss_pred cCHH
Q 002039 318 LSSS 321 (977)
Q Consensus 318 l~~~ 321 (977)
-...
T Consensus 168 e~~~ 171 (369)
T KOG0665|consen 168 EDTD 171 (369)
T ss_pred cCcc
Confidence 6655
No 443
>KOG0671 consensus LAMMER dual specificity kinases [Signal transduction mechanisms]
Probab=98.28 E-value=2.3e-06 Score=93.71 Aligned_cols=103 Identities=11% Similarity=0.093 Sum_probs=64.0
Q ss_pred cCCceEEeeccCCCCCCChHHHH-hcCCCH---HHHHHHHHHHHHHHHHhcCccccCCCCCCeEEccCC-----------
Q 002039 239 SSETVLILEFMDGIRLNDCESLE-AFGVNK---QKVVEEITRAYAHQIYVDGFFNGDPHPGNFLVSKDP----------- 303 (977)
Q Consensus 239 ~~~~vLVmE~i~G~~L~~~~~~~-~~~~~~---~~l~~~l~~~~l~~i~~~G~~H~D~hPgNIlv~~~~----------- 303 (977)
.+.-++|.|.+ |.++.|..... -..+.. +.++..++++ +..+|..+++|-|+||+|||+....
T Consensus 163 rghiCivfell-G~S~~dFlk~N~y~~fpi~~ir~m~~QL~~s-v~fLh~~kl~HTDLKPENILfvss~~~~~~~~k~~~ 240 (415)
T KOG0671|consen 163 RGHICIVFELL-GLSTFDFLKENNYIPFPIDHIRHMGYQLLES-VAFLHDLKLTHTDLKPENILFVSSEYFKTYNPKKKV 240 (415)
T ss_pred cCceEEEEecc-ChhHHHHhccCCccccchHHHHHHHHHHHHH-HHHHHhcceeecCCChheEEEeccceEEEeccCCcc
Confidence 45567899987 76776663311 111223 3344444444 6678999999999999999985321
Q ss_pred -------CCceEEEecccccccCHHHHHHHHHHHHHHH-cCCHHHHHHHHHHcCccc
Q 002039 304 -------PHRPILLDFGLTKKLSSSMKQALAKMFFAAA-EGDHVALLSAFAEMGLRL 352 (977)
Q Consensus 304 -------~g~i~LiDFG~~~~l~~~~r~~~~~l~~a~~-~~d~~~~~~~~~~~g~~~ 352 (977)
.-.|++||||.+..-.+.. ..++ .+.| .+-+.+..+|...
T Consensus 241 ~~~r~~ks~~I~vIDFGsAtf~~e~h--------s~iVsTRHY-RAPEViLgLGwS~ 288 (415)
T KOG0671|consen 241 CFIRPLKSTAIKVIDFGSATFDHEHH--------STIVSTRHY-RAPEVILGLGWSQ 288 (415)
T ss_pred ceeccCCCcceEEEecCCcceeccCc--------ceeeecccc-CCchheeccCcCC
Confidence 1358999999987654433 1222 3333 2556677788753
No 444
>KOG0614 consensus cGMP-dependent protein kinase [Signal transduction mechanisms]
Probab=98.26 E-value=7.4e-07 Score=100.09 Aligned_cols=76 Identities=21% Similarity=0.254 Sum_probs=56.7
Q ss_pred ceEEeeccCCCCCCChHHHHhcC-CC--HHHHHHHHHHHHHHHHHhcCccccCCCCCCeEEccCCCCceEEEeccccccc
Q 002039 242 TVLILEFMDGIRLNDCESLEAFG-VN--KQKVVEEITRAYAHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKL 318 (977)
Q Consensus 242 ~vLVmE~i~G~~L~~~~~~~~~~-~~--~~~l~~~l~~~~l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l 318 (977)
-|+.||-|-|+.|..+.. ..| ++ ..++.-..+--.++.+|++||+.||+||+|+|++.+ |-++|.|||+++.+
T Consensus 495 vYmLmEaClGGElWTiLr--dRg~Fdd~tarF~~acv~EAfeYLH~k~iIYRDLKPENllLd~~--Gy~KLVDFGFAKki 570 (732)
T KOG0614|consen 495 VYMLMEACLGGELWTILR--DRGSFDDYTARFYVACVLEAFEYLHRKGIIYRDLKPENLLLDNR--GYLKLVDFGFAKKI 570 (732)
T ss_pred hhhhHHhhcCchhhhhhh--hcCCcccchhhhhHHHHHHHHHHHHhcCceeccCChhheeeccC--CceEEeehhhHHHh
Confidence 368999999999877633 332 22 222222233333788999999999999999999966 89999999999988
Q ss_pred CHH
Q 002039 319 SSS 321 (977)
Q Consensus 319 ~~~ 321 (977)
...
T Consensus 571 ~~g 573 (732)
T KOG0614|consen 571 GSG 573 (732)
T ss_pred ccC
Confidence 543
No 445
>COG2112 Predicted Ser/Thr protein kinase [Signal transduction mechanisms]
Probab=98.24 E-value=1.2e-05 Score=80.11 Aligned_cols=125 Identities=23% Similarity=0.372 Sum_probs=90.5
Q ss_pred cccccccccEEEEEEecCCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCcHHHHH
Q 002039 124 TPLATASIAQVHRATLVDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEAE 203 (977)
Q Consensus 124 ~piasaSigqV~~A~l~~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea~ 203 (977)
.-+|.|..+.||.+.. .|.+||+|+++++.... ++..||+
T Consensus 28 ~~L~KG~~s~Vyl~~~-~~~~~a~Kvrr~ds~r~---------------------------------------~l~kEak 67 (201)
T COG2112 28 KELAKGTTSVVYLGEW-RGGEVALKVRRRDSPRR---------------------------------------NLEKEAK 67 (201)
T ss_pred hhhhcccccEEEEeec-cCceEEEEEecCCcchh---------------------------------------hHHHHHH
Confidence 5689999999999997 46799999999875422 3455777
Q ss_pred HHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeeecCCceEEeeccCCCCCCChHHHHhcCCCHHHHHHHHHHHHHHHHH
Q 002039 204 NTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQSSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAYAHQIY 283 (977)
Q Consensus 204 n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~l~~i~ 283 (977)
-++.+.. .-..|++|.-++.++.|||++|.+|.++.. +.+++.+...+-++| -+=
T Consensus 68 iLeil~g-------------------~~~~p~vy~yg~~~i~me~i~G~~L~~~~~----~~~rk~l~~vlE~a~--~LD 122 (201)
T COG2112 68 ILEILAG-------------------EGVTPEVYFYGEDFIRMEYIDGRPLGKLEI----GGDRKHLLRVLEKAY--KLD 122 (201)
T ss_pred HHHHhhh-------------------cCCCceEEEechhhhhhhhhcCcchhhhhh----cccHHHHHHHHHHHH--HHH
Confidence 7666643 235789998788888899999999987632 225565555544443 222
Q ss_pred hcCccccCCCCC--CeEEccCCCCceEEEeccccc
Q 002039 284 VDGFFNGDPHPG--NFLVSKDPPHRPILLDFGLTK 316 (977)
Q Consensus 284 ~~G~~H~D~hPg--NIlv~~~~~g~i~LiDFG~~~ 316 (977)
..||-|..++-+ ||++. ++++.||||-.++
T Consensus 123 ~~GI~H~El~~~~k~vlv~---~~~~~iIDFd~At 154 (201)
T COG2112 123 RLGIEHGELSRPWKNVLVN---DRDVYIIDFDSAT 154 (201)
T ss_pred HhccchhhhcCCceeEEec---CCcEEEEEccchh
Confidence 469999999843 66664 3589999998876
No 446
>PRK09550 mtnK methylthioribose kinase; Reviewed
Probab=98.24 E-value=2.8e-05 Score=89.19 Aligned_cols=109 Identities=16% Similarity=0.191 Sum_probs=66.4
Q ss_pred CCCHHHHHHHHHHHhCCChhhcccccCccccccccccEEEEEEecCC-CEEEEEEecCChhhhhHhhHHHHHHHHHHHHh
Q 002039 96 PRPVQEVSQTIEREFGESMGGMFMDFVETPLATASIAQVHRATLVDG-RQVVVKVQHQGIKTIILEDLKNAKSIVDWIAW 174 (977)
Q Consensus 96 ~~~~~~v~~~l~~elg~~~~~~f~~~d~~piasaSigqV~~A~l~~G-~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~ 174 (977)
++.-+.+...+.+..|.- .--...+.++++.|-+..||+.++.+| +.|+||...|.++..-.
T Consensus 6 ~l~~~~v~~yl~~~~~~~--~~~~~~~~~elggGn~N~VyrV~~~~g~~svIVKqa~p~~r~~g~--------------- 68 (401)
T PRK09550 6 TLTEEDAVEYAALKLGLF--DPKALLTAREIGDGNLNLVFRVSDTEGGKSVIVKQALPYVRVVGE--------------- 68 (401)
T ss_pred eCCHhHHHHHHHHhcCCC--CCcccceeeEcCCCceEEEEEEEeCCCCeEEEEEecCcccccccc---------------
Confidence 455566666664443311 111234457899999999999999877 58999987654331000
Q ss_pred hCCCCCCchhHHHHhhhcccccCcHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeee--cCCceEEeeccCCC
Q 002039 175 AEPQYDFNPIIDEWCKEAPKELDFNSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ--SSETVLILEFMDGI 252 (977)
Q Consensus 175 ~~~~~~~~~~~~e~~~~l~~Eld~~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~--~~~~vLVmE~i~G~ 252 (977)
.+. +..| .+..|++.+..+... .+..||+|+. ....+|||||+++.
T Consensus 69 -----~wp---------l~~e-R~~~Eae~L~~l~~~-----------------~p~~VPkV~~~D~~~~~lVME~L~~~ 116 (401)
T PRK09550 69 -----SWP---------LTLD-RARIEAEALKIQAKY-----------------VPDLVPKVYHYDEELAVTVMEDLSDH 116 (401)
T ss_pred -----ccc---------ccHH-HHHHHHHHHHHHHhh-----------------CCCCCCeEEEECCCCCEEEEecCCCc
Confidence 000 0000 134566666666542 2457999997 45579999999975
Q ss_pred C
Q 002039 253 R 253 (977)
Q Consensus 253 ~ 253 (977)
.
T Consensus 117 ~ 117 (401)
T PRK09550 117 K 117 (401)
T ss_pred c
Confidence 4
No 447
>cd05150 APH Aminoglycoside 3'-phosphotransferase (APH). The APH subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). APH catalyzes the transfer of the gamma-phosphoryl group from ATP to aminoglycoside antibiotics such as kanamycin, streptomycin, neomycin, and gentamicin, among others. The aminoglycoside antibiotics target the 30S ribosome and promote miscoding, leading to the production of defective proteins which insert into the bacterial membrane, resulting in membrane damage and the ultimate demise of the bacterium. Phosphorylation of the aminoglycoside antibiotics results in their inactivation, leading to bacterial antibiotic resistance. The APH gene is found on transposons and plasmids and is thought to have originated as a self-defense mechanism used by microorganisms that produce the antibio
Probab=98.20 E-value=2.5e-05 Score=84.33 Aligned_cols=34 Identities=18% Similarity=0.133 Sum_probs=27.6
Q ss_pred cCccccCCCCCCeEEccCCCCceEEEecccccccCH
Q 002039 285 DGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 320 (977)
Q Consensus 285 ~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 320 (977)
..++|+|+||+|||++.+ +.+.||||+.++.-++
T Consensus 163 ~~l~HgD~~~~Nil~~~~--~~~~iIDwe~a~~gdp 196 (244)
T cd05150 163 LVVTHGDACLPNIIVDPG--KFSGFIDLGRLGVADR 196 (244)
T ss_pred eEEECCCCCCccEEEeCC--cEEEEEEccccccccH
Confidence 458999999999999853 5567999999875543
No 448
>cd05155 APH_ChoK_like_1 Uncharacterized bacterial proteins with similarity to Aminoglycoside 3'-phosphotransferase (APH) and Choline kinase (ChoK) family members. The APH/ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates, such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides, and macrolides leads to their inactivation and to bacterial antibiotic resista
Probab=98.19 E-value=2.2e-05 Score=84.33 Aligned_cols=33 Identities=36% Similarity=0.587 Sum_probs=26.6
Q ss_pred cCccccCCCCCCeEEccCCCCce-EEEecccccccCH
Q 002039 285 DGFFNGDPHPGNFLVSKDPPHRP-ILLDFGLTKKLSS 320 (977)
Q Consensus 285 ~G~~H~D~hPgNIlv~~~~~g~i-~LiDFG~~~~l~~ 320 (977)
.+++|+|+||+|||++. +++ .||||+.+..=++
T Consensus 164 ~~l~HGD~~~~Nvlv~~---~~i~giIDw~~a~~gDp 197 (235)
T cd05155 164 PVWFHGDLAPGNLLVQD---GRLSAVIDFGCLGVGDP 197 (235)
T ss_pred ceEEeCCCCCCcEEEEC---CCEEEEEeCcccCcCCh
Confidence 56999999999999973 355 6999999766544
No 449
>PRK05231 homoserine kinase; Provisional
Probab=98.13 E-value=3.5e-05 Score=86.83 Aligned_cols=50 Identities=12% Similarity=0.121 Sum_probs=35.2
Q ss_pred CCCCHHHHHHHHHHHhCCChhhcccccCccccccccccEEEEEEecCCCEEEEEEec
Q 002039 95 PPRPVQEVSQTIEREFGESMGGMFMDFVETPLATASIAQVHRATLVDGRQVVVKVQH 151 (977)
Q Consensus 95 p~~~~~~v~~~l~~elg~~~~~~f~~~d~~piasaSigqV~~A~l~~G~~VAVKv~~ 151 (977)
.+.+.++++.++ +.+|- .++ .+-++++.|...++|+....+| .+++|+.+
T Consensus 5 t~ls~~~l~~~l-~~y~~--~~~---~~~~~l~~G~~n~~y~v~t~~g-~~vLK~~~ 54 (319)
T PRK05231 5 TDVSDDELAAFL-APYDL--GEL---LSLKGIAEGIENSNFFLTTTQG-EYVLTLFE 54 (319)
T ss_pred ccCCHHHHHHHH-HhcCC--chh---hccchhccccccceEEEEeCCC-cEEEEEec
Confidence 456777887777 56664 121 1236789999999999987555 68889764
No 450
>PF01636 APH: Phosphotransferase enzyme family This family is part of the larger protein kinase superfamily.; InterPro: IPR002575 This entry consists of bacterial antibiotic resistance proteins, which confer resistance to various aminoglycosides they include:- aminoglycoside 3'-phosphotransferase or kanamycin kinase / neomycin-kanamycin phosphotransferase and streptomycin 3''-kinase or streptomycin 3''-phosphotransferase. The aminoglycoside phosphotransferases inactivate aminoglycoside antibiotics via phosphorylation []. The proteins are found in a range of taxonomic groups.; PDB: 2PPQ_A 2Q83_B 3TDV_B 3TDW_A 3I0O_A 3I0Q_A 3I1A_B 3Q2M_A 3HAV_C 2PUI_B ....
Probab=98.12 E-value=1.7e-05 Score=84.33 Aligned_cols=36 Identities=31% Similarity=0.378 Sum_probs=24.5
Q ss_pred hcCccccCCCCCCeEEccCCCCceEEEecccccccCH
Q 002039 284 VDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 320 (977)
Q Consensus 284 ~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 320 (977)
..+++|+|+||+|||++++ +++|.||||+.++.-+.
T Consensus 165 ~~~~~HgD~~~~Nil~~~~-~~~i~iID~e~a~~~~~ 200 (239)
T PF01636_consen 165 PPVLIHGDLHPGNILVDPS-DGRIGIIDFEDAGWGDP 200 (239)
T ss_dssp CEEEE-SS-SGGGEEEESS-TTEEEE--GTT-EEEET
T ss_pred CcEEEEeccccccceeeec-cceeEEEecccceECCH
Confidence 3679999999999999832 36778999999876644
No 451
>COG0515 SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair]
Probab=98.09 E-value=1.8e-05 Score=86.89 Aligned_cols=141 Identities=21% Similarity=0.242 Sum_probs=87.8
Q ss_pred cccccccccEEEEEEecCCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCcHHHHH
Q 002039 124 TPLATASIAQVHRATLVDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEAE 203 (977)
Q Consensus 124 ~piasaSigqV~~A~l~~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea~ 203 (977)
+.+|.|++++||++... ..+++|+..+....... ....+.+|..
T Consensus 6 ~~l~~g~~~~v~~~~~~--~~~~~k~~~~~~~~~~~----------------------------------~~~~~~~e~~ 49 (384)
T COG0515 6 RKLGEGSFGEVYLARDR--KLVALKVLAKKLESKSK----------------------------------EVERFLREIQ 49 (384)
T ss_pred EeecCCCCeEEEEEEec--cEEEEEeechhhccchh----------------------------------HHHHHHHHHH
Confidence 46789999999999976 88999988765432210 0112333444
Q ss_pred HHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeeec-CCceEEeeccCCCCCCChHHHHh--cCCCHHHHHHHHHHHH--
Q 002039 204 NTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQS-SETVLILEFMDGIRLNDCESLEA--FGVNKQKVVEEITRAY-- 278 (977)
Q Consensus 204 n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~~-~~~vLVmE~i~G~~L~~~~~~~~--~~~~~~~l~~~l~~~~-- 278 (977)
-+..+.+. ...+.+-..+.. ...+++|+++.|..+.+...... .............+..
T Consensus 50 ~~~~~~~~----------------~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 113 (384)
T COG0515 50 ILASLNHP----------------PNIVKLYDFFQDEGSLYLVMEYVDGGSLEDLLKKIGRKGPLSESEALFILAQILSA 113 (384)
T ss_pred HHHHccCC----------------cceeeEEEEEecCCEEEEEEecCCCCcHHHHHHhcccccCCCHHHHHHHHHHHHHH
Confidence 33322210 001111111222 22589999999999885432211 0344444444444443
Q ss_pred HHHHHhcCccccCCCCCCeEEccCCCC-ceEEEeccccccc
Q 002039 279 AHQIYVDGFFNGDPHPGNFLVSKDPPH-RPILLDFGLTKKL 318 (977)
Q Consensus 279 l~~i~~~G~~H~D~hPgNIlv~~~~~g-~i~LiDFG~~~~l 318 (977)
+..+|..|++|||+||.||+++.. + .++++|||++..+
T Consensus 114 l~~~H~~~~~hrd~kp~nil~~~~--~~~~~l~dfg~~~~~ 152 (384)
T COG0515 114 LEYLHSKGIIHRDIKPENILLDRD--GRVVKLIDFGLAKLL 152 (384)
T ss_pred HHHHHhCCeeccCCCHHHeeecCC--CCeEEEeccCcceec
Confidence 568999999999999999999865 5 6999999998833
No 452
>PF03881 Fructosamin_kin: Fructosamine kinase; InterPro: IPR016477 Ketosamines derive from a non-enzymatic reaction between a sugar and a protein []. Ketosamine-3-kinases (KT3K), of which fructosamine-3-kinase (FN3K) is the best-known example, catalyse the phosphorylation of the ketosamine moiety of glycated proteins. The instability of a phosphorylated ketosamine leads to its degradation, and KT3K is thus thought to be involved in protein repair []. The function of the prokaryotic members of this group has not been established. However, several lines of evidence indicate that they may function as fructosamine-3-kinases (FN3K). First, they are similar to characterised FN3K from mouse and human. Second, the Escherichia coli members are found in close proximity on the genome to fructose-6-phosphate kinase (PfkB). Last, FN3K activity has been found in a Anacystis montana (Gloeocapsa montana Kutzing 1843) [], indicating such activity-directly demonstrated in eukaryotes-is nonetheless not confined to eukaryotes. This family includes eukaryotic fructosamine-3-kinase enzymes [] which may initiate a process leading to the deglycation of fructoselysine and of glycated proteins and in the phosphorylation of 1-deoxy-1-morpholinofructose, fructoselysine, fructoseglycine, fructose and glycated lysozyme. The family also includes bacterial members that have not been characterised but probably have a similar or identical function. For additional information please see [].; PDB: 3JR1_B 3F7W_A.
Probab=98.09 E-value=1.6e-05 Score=87.63 Aligned_cols=92 Identities=25% Similarity=0.415 Sum_probs=58.1
Q ss_pred HHHHHHHHHHHhCCChhhcccccCccccccccccEEEEEEecCCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCC
Q 002039 99 VQEVSQTIEREFGESMGGMFMDFVETPLATASIAQVHRATLVDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQ 178 (977)
Q Consensus 99 ~~~v~~~l~~elg~~~~~~f~~~d~~piasaSigqV~~A~l~~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~ 178 (977)
|..|.+.|.+.+|.+.. --+.+|++.|+|.++|+.. .+++.+-||+........
T Consensus 2 w~~i~~~~~~~~~~~~~----i~~~~~v~GG~i~~a~~~~-~~~~~~FvK~~~~~~~~~--------------------- 55 (288)
T PF03881_consen 2 WQAIEQQISEQLGADFK----ITSIEPVSGGDINEAYRLD-TDGGSYFVKVNSESGRDM--------------------- 55 (288)
T ss_dssp HHHHHHHHHHHHTS---------EEEEE--SSSSEEEEEE-TTS-EEEEEEEEGGGCCH---------------------
T ss_pred hHHHHHHHHHHhCCCCc----eeeeEecCCCChhheEEEE-CCCccEEEEecChhhHHH---------------------
Confidence 56788999999987621 1123789999999999988 578999999886332222
Q ss_pred CCCchhHHHHhhhcccccCcHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeee----cCCceEEeeccCCC
Q 002039 179 YDFNPIIDEWCKEAPKELDFNSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ----SSETVLILEFMDGI 252 (977)
Q Consensus 179 ~~~~~~~~e~~~~l~~Eld~~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~----~~~~vLVmE~i~G~ 252 (977)
|..|++.++.+++. ..+.||+|+. .+..+|+|||++..
T Consensus 56 -------------------f~~Ea~gL~~L~~~-----------------~~~~vP~vi~~G~~~~~~fLlle~l~~~ 97 (288)
T PF03881_consen 56 -------------------FEGEAEGLKALAEA-----------------NPIRVPKVIAWGEYDDDAFLLLEFLEMG 97 (288)
T ss_dssp -------------------HHHHHHHHHHHCHT-----------------TTSBS--EEEEEE-SSCCEEEEE-----
T ss_pred -------------------HHHHHHHHHHHHhc-----------------CCCCCCeEEEEEeecCCceEEEEeecCC
Confidence 45677888777541 3578999985 35679999999876
No 453
>PLN02756 S-methyl-5-thioribose kinase
Probab=98.06 E-value=8.9e-05 Score=84.77 Aligned_cols=59 Identities=14% Similarity=0.174 Sum_probs=39.9
Q ss_pred hCCCCCCHHHHHHHHHHH------hCCChhhcccccCccccccccccEEEEEEecCCCEEEEEEecCChh
Q 002039 92 DSLPPRPVQEVSQTIERE------FGESMGGMFMDFVETPLATASIAQVHRATLVDGRQVVVKVQHQGIK 155 (977)
Q Consensus 92 d~~p~~~~~~v~~~l~~e------lg~~~~~~f~~~d~~piasaSigqV~~A~l~~G~~VAVKv~~p~i~ 155 (977)
...-+++.+.+...+.+. +|.. +.....++||-|.+..||+... ++..|+||...|.++
T Consensus 4 ~~y~~l~~~~l~~yl~~~~~~~~~l~g~----~~~l~~~eiggGn~N~VyrV~~-~~~svVVKqa~p~~r 68 (418)
T PLN02756 4 SEFRPLDEKSLVEYIKATPALSSKIGND----LDDLKIKEVGDGNLNFVYIVVS-SSGSFVIKQALPYIR 68 (418)
T ss_pred cccccCCHHHHHHHHHHccchhhhcCCC----CCCceEEEcCCCceeeEEEEEc-CCccEEEEeCCcccc
Confidence 344566666666666554 3211 2334567899999999999886 456799998777654
No 454
>KOG4278 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=98.03 E-value=3.8e-06 Score=96.11 Aligned_cols=139 Identities=20% Similarity=0.184 Sum_probs=87.9
Q ss_pred ccccccccccEEEEEEec-CCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCcHHH
Q 002039 123 ETPLATASIAQVHRATLV-DGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSE 201 (977)
Q Consensus 123 ~~piasaSigqV~~A~l~-~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~E 201 (977)
...+|-|-+|.||.|.++ -.-.||||.++.+..+ ++ .|..|
T Consensus 272 khKLGGGQYGeVYeGvWKkyslTvAVKtLKEDtMe----------------------------ve----------EFLkE 313 (1157)
T KOG4278|consen 272 KHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME----------------------------VE----------EFLKE 313 (1157)
T ss_pred eeccCCCcccceeeeeeeccceeeehhhhhhcchh----------------------------HH----------HHHHH
Confidence 357999999999999985 4578999976543211 11 24556
Q ss_pred HHHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeeecC---CceEEeeccCCCCCCChHHHHhcC-CCHHHHHHHHHH-
Q 002039 202 AENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQSS---ETVLILEFMDGIRLNDCESLEAFG-VNKQKVVEEITR- 276 (977)
Q Consensus 202 a~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~~~---~~vLVmE~i~G~~L~~~~~~~~~~-~~~~~l~~~l~~- 276 (977)
|..++.+.+- .-|..--| |+ .-|+++|||.-+.|-|+....... +..--++....+
T Consensus 314 AAvMKeikHp-----------------NLVqLLGV--CT~EpPFYIiTEfM~yGNLLdYLRecnr~ev~avvLlyMAtQI 374 (1157)
T KOG4278|consen 314 AAVMKEIKHP-----------------NLVQLLGV--CTHEPPFYIITEFMCYGNLLDYLRECNRSEVPAVVLLYMATQI 374 (1157)
T ss_pred HHHHHhhcCc-----------------cHHHHhhh--hccCCCeEEEEecccCccHHHHHHHhchhhcchhHHHHHHHHH
Confidence 6655554330 00111111 32 247999999988887764322111 111112222222
Q ss_pred -HHHHHHHhcCccccCCCCCCeEEccCCCCceEEEecccccccCH
Q 002039 277 -AYAHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 320 (977)
Q Consensus 277 -~~l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 320 (977)
..++.+-..+|||||+-..|.||.++ .-+++.|||+++.+..
T Consensus 375 sSaMeYLEkknFIHRDLAARNCLVgEn--hiVKvADFGLsRlMtg 417 (1157)
T KOG4278|consen 375 SSAMEYLEKKNFIHRDLAARNCLVGEN--HIVKVADFGLSRLMTG 417 (1157)
T ss_pred HHHHHHHHHhhhhhhhhhhhhcccccc--ceEEeeccchhhhhcC
Confidence 23667778999999999999999865 7789999999887654
No 455
>KOG0584 consensus Serine/threonine protein kinase [General function prediction only]
Probab=98.03 E-value=1.8e-06 Score=99.89 Aligned_cols=77 Identities=16% Similarity=0.126 Sum_probs=55.9
Q ss_pred ceEEeeccCCCCCCChHHHHhcCCCHHHHHHHHHHHH--HHHHHh--cCccccCCCCCCeEEccCCCCceEEEecccccc
Q 002039 242 TVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--AHQIYV--DGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKK 317 (977)
Q Consensus 242 ~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~--l~~i~~--~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~ 317 (977)
-++|+|.+.+++|..+.. +...++.+.+-.+.-+++ +..+|. --|+|||||-.||+|+.. .|.++|-|.|++..
T Consensus 118 in~iTEL~TSGtLr~Y~k-k~~~vn~kaik~W~RQILkGL~yLHs~~PPIIHRDLKCDNIFinG~-~G~VKIGDLGLAtl 195 (632)
T KOG0584|consen 118 INFITELFTSGTLREYRK-KHRRVNIKAIKSWCRQILKGLVYLHSQDPPIIHRDLKCDNIFVNGN-LGEVKIGDLGLATL 195 (632)
T ss_pred eeeeeecccCCcHHHHHH-HhccCCHHHHHHHHHHHHHHhhhhhcCCCCccccccccceEEEcCC-cCceeecchhHHHH
Confidence 378999999999988743 333455554444444433 445554 359999999999999864 68999999999876
Q ss_pred cCH
Q 002039 318 LSS 320 (977)
Q Consensus 318 l~~ 320 (977)
+..
T Consensus 196 ~r~ 198 (632)
T KOG0584|consen 196 LRK 198 (632)
T ss_pred hhc
Confidence 543
No 456
>PRK12396 5-methylribose kinase; Reviewed
Probab=98.02 E-value=5e-05 Score=86.27 Aligned_cols=51 Identities=24% Similarity=0.510 Sum_probs=38.9
Q ss_pred cCccccCCCCCCeEEccCCCCceEEEe--cccccccCHHHHHHHHHHHHHHHcCCH
Q 002039 285 DGFFNGDPHPGNFLVSKDPPHRPILLD--FGLTKKLSSSMKQALAKMFFAAAEGDH 338 (977)
Q Consensus 285 ~G~~H~D~hPgNIlv~~~~~g~i~LiD--FG~~~~l~~~~r~~~~~l~~a~~~~d~ 338 (977)
..++|+|+||||||++++ .+++|| |+..+.+.=+.=.-+.+|+.+.+.++.
T Consensus 227 ~aLlHGDlHtGSI~v~~~---~~kvIDpEFAfyGP~gFDiG~~lanll~ay~~~~~ 279 (409)
T PRK12396 227 QALIHGDLHTGSVFVKND---STKVIDPEFAFYGPMGYDIGNVMANLMFAWVNADA 279 (409)
T ss_pred hhhccCcCCCCCEEecCC---ceEEEcccccccCCcHHHHHHHHHHHHHHHhcCcc
Confidence 578999999999999854 689999 555666555555567788888876654
No 457
>cd05157 ETNK_euk Ethanolamine kinase (ETNK) in eukaryotes. ETNK is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major phospholipid, phosphatidylethanolamine (PtdEtn). Unlike ChoK, ETNK shows specific activity for its substrate, and displays negligible activity towards N-methylated derivatives of Etn. The Drosophila ETNK is implicated in development and neuronal function. Mammals contain two ETNK proteins, ETNK1 and ETNK2. ETNK1 selectively increases Etn uptake and phosphorylation, as well as PtdEtn synthesis. ETNK2 is found primarily in the liver and reproductive tissues. It plays a critical role in regulating placental hemostasis to support late embryo
Probab=97.98 E-value=6.9e-05 Score=80.34 Aligned_cols=77 Identities=17% Similarity=0.246 Sum_probs=53.8
Q ss_pred ccccccccccEEEEEEecC--CCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCcHH
Q 002039 123 ETPLATASIAQVHRATLVD--GRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNS 200 (977)
Q Consensus 123 ~~piasaSigqV~~A~l~~--G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~ 200 (977)
-+++..|-..+||+....+ ++.|++|+..++... -+|..+
T Consensus 3 i~~l~gG~tN~~~~v~~~~~~~~~~vlR~~~~~~~~--------------------------------------~~d~~~ 44 (235)
T cd05157 3 FKRFTGGITNKLVKVSNKEDNQDAVLVRVYGNKTEL--------------------------------------IIDRER 44 (235)
T ss_pred EEEcCCcccceEEEEEcCCCCCCeEEEEEccCCccc--------------------------------------eecHHH
Confidence 4688899999999998764 689999986654221 123345
Q ss_pred HHHHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeeecCCceEEeeccCCCCCCC
Q 002039 201 EAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQSSETVLILEFMDGIRLND 256 (977)
Q Consensus 201 Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~~~~~vLVmE~i~G~~L~~ 256 (977)
|...+..+... .+ +|+++...+..++|||++|.++..
T Consensus 45 E~~~~~~l~~~------------------gl-~P~v~~~~~~~~l~e~i~G~~l~~ 81 (235)
T cd05157 45 ELRIHKLLSKH------------------GL-APKLYATFQNGLIYEFIPGRTLEP 81 (235)
T ss_pred HHHHHHHHHhC------------------CC-CCeEEEEeCCcEEEEeeCCCcCCH
Confidence 77766666531 23 678776555679999999988753
No 458
>TIGR02721 ycfN_thiK thiamine kinase. Members of this family are the ycfN gene product of Escherichia coli, now identified as the salvage enzyme thiamine kinase (thiK), and additional proteobacterial homologs taken to be orthologs with equivalent function.
Probab=97.98 E-value=4.5e-05 Score=83.08 Aligned_cols=137 Identities=18% Similarity=0.147 Sum_probs=84.2
Q ss_pred cccccccccEEEEEEecCCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCcHHHHH
Q 002039 124 TPLATASIAQVHRATLVDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEAE 203 (977)
Q Consensus 124 ~piasaSigqV~~A~l~~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea~ 203 (977)
.++..|-..++|+.. .+|+.++||+..++... -.+|..+|.+
T Consensus 2 ~~~~~G~tn~~y~~~-~~~~~~vlR~~~~~~~~-------------------------------------~~~~r~~E~~ 43 (256)
T TIGR02721 2 QTLSGGLTNRSWRIE-HPGISFVWRPQSPVCKA-------------------------------------LGVDRQREYQ 43 (256)
T ss_pred CcCCCcCcCCeEEEE-eCCccEEEeeCCccccc-------------------------------------ccCcHHHHHH
Confidence 356788888999987 46788999975543210 0135566777
Q ss_pred HHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeeecCCceEEeeccCCCCCCCh--------HH-------HHhc-----
Q 002039 204 NTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQSSETVLILEFMDGIRLNDC--------ES-------LEAF----- 263 (977)
Q Consensus 204 n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~~~~~vLVmE~i~G~~L~~~--------~~-------~~~~----- 263 (977)
.+..+... .+ .|+++......+||||++|.++... .. +...
T Consensus 44 ~l~~l~~~------------------g~-~P~~i~~~~~~~v~e~i~G~~~~~~~~~~~~~~~~la~~l~~lH~~~~~~~ 104 (256)
T TIGR02721 44 ILQALSAL------------------GL-APKPILVNEHWLLVEWLEGEVITLDQFVALDLLLELAALLHQLHSQPRFGY 104 (256)
T ss_pred HHHHHHhc------------------CC-CCceEEEeCCEEEEEeccCcccccccccCchhHHHHHHHHHHHhCCCCCCC
Confidence 77776541 12 5888875567899999999887642 00 1100
Q ss_pred CCCHH-HHHHH---H--------HHHHHHHHH--------hcCccccCCCCCCeEEccCCCCceEEEecccccccCH
Q 002039 264 GVNKQ-KVVEE---I--------TRAYAHQIY--------VDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 320 (977)
Q Consensus 264 ~~~~~-~l~~~---l--------~~~~l~~i~--------~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 320 (977)
..+.. .+... + ....++.+. ...++|+|+||+||+++.+ + +.||||..++.=++
T Consensus 105 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~H~Dl~~~Nil~~~~--~-~~lIDwE~a~~gdp 178 (256)
T TIGR02721 105 PLSLKARIAHYWLQIDPARRTPEWLRLYKQFRSAPEPAPLPLAPLHMDVHAYNLVVTPQ--G-LKLIDWEYASDGDI 178 (256)
T ss_pred CCCHHHHHHHHHHhcccccCChHHHHHHHHHHhccCCCCCCCeeecCCCCcCcEEEeCC--C-CEEEeccccCcCCH
Confidence 01111 11110 0 001111221 2368999999999999854 4 89999999876554
No 459
>KOG0200 consensus Fibroblast/platelet-derived growth factor receptor and related receptor tyrosine kinases [Signal transduction mechanisms]
Probab=97.91 E-value=3.2e-05 Score=94.64 Aligned_cols=139 Identities=16% Similarity=0.148 Sum_probs=92.5
Q ss_pred ccccccccEEEEEEec----C----CCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhccccc
Q 002039 125 PLATASIAQVHRATLV----D----GRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKEL 196 (977)
Q Consensus 125 piasaSigqV~~A~l~----~----G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~El 196 (977)
++|+|.||+|++|.++ . ...||||..+......-..
T Consensus 303 ~lg~g~fG~v~~~~~~~~~~~~~~~~~~VaVK~~k~~~~~~~~~------------------------------------ 346 (609)
T KOG0200|consen 303 YLGEGAFGQVVKALLFGLSKALLSIYVTVAVKMLKENASSSEKK------------------------------------ 346 (609)
T ss_pred eeecccccceEeEEEeecccccccceEEEEEEecccccCcHHHH------------------------------------
Confidence 8999999999999863 1 4579999877655431111
Q ss_pred CcHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeee---cCCceEEeeccCCCCCCChHHHHh-----------
Q 002039 197 DFNSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ---SSETVLILEFMDGIRLNDCESLEA----------- 262 (977)
Q Consensus 197 d~~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~---~~~~vLVmE~i~G~~L~~~~~~~~----------- 262 (977)
++..|.+.+..+.... . .|--+.. .+..++|+||++.+.|.++....+
T Consensus 347 ~~~~El~~m~~~g~H~-----------------n-iv~llG~~t~~~~~~~v~Ey~~~G~L~~~Lr~~r~~~~~~~~~~~ 408 (609)
T KOG0200|consen 347 DLMSELNVLKELGKHP-----------------N-IVNLLGACTQDGPLYVIVEYAEHGDLLEFLRKKRVTESIDGSGVF 408 (609)
T ss_pred HHHHHHHHHHHhcCCc-----------------c-hhhheeeeccCCceEEEEEeccCCcHHHHHHhccccccccccCCC
Confidence 2333444444443211 0 1111111 344689999999988887744333
Q ss_pred ----cCCCHHHHHHHHHHHH--HHHHHhcCccccCCCCCCeEEccCCCCceEEEecccccccC
Q 002039 263 ----FGVNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 319 (977)
Q Consensus 263 ----~~~~~~~l~~~l~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~ 319 (977)
..+....+.....++. ++.+....++|||+=.-|||+..+ ..+++.|||+++...
T Consensus 409 ~~~~~~L~~~dLlsfa~QIa~GMe~L~~~~~vHRDLAaRNVLi~~~--~~~kIaDFGlar~~~ 469 (609)
T KOG0200|consen 409 PNERDALTTKDLLSFAYQIANGMEYLASVPCVHRDLAARNVLITKN--KVIKIADFGLARDHY 469 (609)
T ss_pred ccccCCcCHHHHHHHHHHHHHHHHHHhhCCccchhhhhhhEEecCC--CEEEEccccceeccC
Confidence 1145555665555555 667778999999999999999865 689999999998543
No 460
>KOG1290 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=97.91 E-value=2.1e-05 Score=88.69 Aligned_cols=126 Identities=17% Similarity=0.193 Sum_probs=73.9
Q ss_pred ccccccccccEEEEEEe-cCCCEEEEEEecCC--hhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCcH
Q 002039 123 ETPLATASIAQVHRATL-VDGRQVVVKVQHQG--IKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFN 199 (977)
Q Consensus 123 ~~piasaSigqV~~A~l-~~G~~VAVKv~~p~--i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~ 199 (977)
.+.+|=|-|+.|+.|.+ .+.+.||+||++-. ..+....++++|+.+..- .|
T Consensus 83 ~rKLGWGHFSTVWLawDtq~~r~VAlKVvKSAqhYtEaAlDEIklL~~v~~~----Dp---------------------- 136 (590)
T KOG1290|consen 83 QRKLGWGHFSTVWLAWDTQNKRYVALKVVKSAQHYTEAALDEIKLLQQVREG----DP---------------------- 136 (590)
T ss_pred EEeccccccceeEEEeeccCCeEEEEEEEehhhHHHHHHHHHHHHHHHHHhc----CC----------------------
Confidence 57899999999999987 46789999999742 223333344444433210 00
Q ss_pred HHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeee-------c-CCceEEeeccCCCCCCChHHH-HhcCCCHHHH
Q 002039 200 SEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-------S-SETVLILEFMDGIRLNDCESL-EAFGVNKQKV 270 (977)
Q Consensus 200 ~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-------~-~~~vLVmE~i~G~~L~~~~~~-~~~~~~~~~l 270 (977)
.....-.|-+++. . ..-++|.|++ |..|-.+... .-.|+....+
T Consensus 137 --------------------------~~~~~~~VV~LlD~FkhsGpNG~HVCMVfEvL-GdnLLklI~~s~YrGlpl~~V 189 (590)
T KOG1290|consen 137 --------------------------NDPGKKCVVQLLDHFKHSGPNGQHVCMVFEVL-GDNLLKLIKYSNYRGLPLSCV 189 (590)
T ss_pred --------------------------CCCCCceeeeeeccceecCCCCcEEEEEehhh-hhHHHHHHHHhCCCCCcHHHH
Confidence 0001111222211 1 2236899988 6655444322 2235554444
Q ss_pred HHHHHHHH--HHHHHh-cCccccCCCCCCeEEcc
Q 002039 271 VEEITRAY--AHQIYV-DGFFNGDPHPGNFLVSK 301 (977)
Q Consensus 271 ~~~l~~~~--l~~i~~-~G~~H~D~hPgNIlv~~ 301 (977)
-++..+++ +..+|+ .||+|.||||.|||+..
T Consensus 190 K~I~~qvL~GLdYLH~ecgIIHTDlKPENvLl~~ 223 (590)
T KOG1290|consen 190 KEICRQVLTGLDYLHRECGIIHTDLKPENVLLCS 223 (590)
T ss_pred HHHHHHHHHHHHHHHHhcCccccCCCcceeeeec
Confidence 44433433 777775 89999999999999963
No 461
>PLN00181 protein SPA1-RELATED; Provisional
Probab=97.76 E-value=2.5e-05 Score=99.05 Aligned_cols=74 Identities=14% Similarity=0.135 Sum_probs=50.7
Q ss_pred CceEEeeccCCCCCCChHHHHhcCCCHHHHHHHHHHHH--HHHHHhcCccccCCCCCCeEEccCCCCceEEEecccccc
Q 002039 241 ETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKK 317 (977)
Q Consensus 241 ~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~ 317 (977)
..|++|||.+ .+|.++.......++...+...+.+++ +..+|..||+||||||.||||+.. ++++++|||++..
T Consensus 54 ~~~~~~e~~~-~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~gIvHrDlKP~NiLl~~~--~~~k~~d~~~~~~ 129 (793)
T PLN00181 54 SIVRALECED-VSLRQWLDNPDRSVDAFECFHVFRQIVEIVNAAHSQGIVVHNVRPSCFVMSSF--NHVSFIESASCSD 129 (793)
T ss_pred hhhhhhccCC-ccHHHHHhcccccccHHHHHHHHHHHHHHHHHHHhCCeeeccCCchhEEEccc--CcEEEeeccccCc
Confidence 3577899874 477776432223355555555555544 788999999999999999999743 5566666665543
No 462
>PRK06148 hypothetical protein; Provisional
Probab=97.76 E-value=0.00044 Score=89.27 Aligned_cols=56 Identities=23% Similarity=0.338 Sum_probs=45.1
Q ss_pred HHhCCCCCCHHHHHHHHHHHhCCChhhcccccCccccccccccEEEEEEecCCCEEEEEEecCC
Q 002039 90 LQDSLPPRPVQEVSQTIEREFGESMGGMFMDFVETPLATASIAQVHRATLVDGRQVVVKVQHQG 153 (977)
Q Consensus 90 Lqd~~p~~~~~~v~~~l~~elg~~~~~~f~~~d~~piasaSigqV~~A~l~~G~~VAVKv~~p~ 153 (977)
+....|.++.+++++++++.+|-.- + .++|++ ..-++|+.+..+|+.+++||.+|.
T Consensus 4 ~~~~~p~~s~~~~~~~~~~~ygl~~-~------~~~L~s-~~d~nf~v~~~~g~~yVLKi~~~~ 59 (1013)
T PRK06148 4 LSHPAPEFTTKDAEALLAQHFGISA-T------ATPLDG-ERDLNFRLTTDDGADYILKIVNPS 59 (1013)
T ss_pred CCCCCCCCCHHHHHHHHHHHcCCce-E------EeecCC-cCCceEEEEeCCCCeEEEEEcCCc
Confidence 3456788999999999999998642 1 257854 568999998888999999999886
No 463
>PF14531 Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_A 3Q5Z_A 3Q60_A.
Probab=97.74 E-value=0.00014 Score=79.55 Aligned_cols=40 Identities=28% Similarity=0.442 Sum_probs=30.4
Q ss_pred HHHHHhcCccccCCCCCCeEEccCCCCceEEEecccccccCH
Q 002039 279 AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 320 (977)
Q Consensus 279 l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 320 (977)
...+|..|++|+|++|.|++++.+ |.+.|-||+.+.....
T Consensus 158 vA~Lh~~GlVHgdi~~~nfll~~~--G~v~Lg~F~~~~r~g~ 197 (288)
T PF14531_consen 158 VANLHSYGLVHGDIKPENFLLDQD--GGVFLGDFSSLVRAGT 197 (288)
T ss_dssp HHHHHHTTEEEST-SGGGEEE-TT--S-EEE--GGGEEETTE
T ss_pred HHHHhhcceEecccceeeEEEcCC--CCEEEcChHHHeecCc
Confidence 557889999999999999999966 9999999998877654
No 464
>COG1686 DacC D-alanyl-D-alanine carboxypeptidase [Cell envelope biogenesis, outer membrane]
Probab=97.72 E-value=0.00018 Score=82.30 Aligned_cols=54 Identities=26% Similarity=0.345 Sum_probs=43.8
Q ss_pred ccceEEEEE--ecCeeEEEeeccccCCCCCCCCCCCCcceeecchHHHHHHHHHHHHHCCCcCcCCchh
Q 002039 495 ILGIQVCAY--KDGEVIIDTSAGMLGRYDPRPVQPDSLFPVFSVTKGITAGMLHWLVDNGKLKLEENIA 561 (977)
Q Consensus 495 ~pG~svaVv--~~g~~v~~~~~G~~~~~~~~~~t~~T~f~i~SiTK~~ta~~v~~lv~~G~l~ld~~v~ 561 (977)
+.+-+..|+ ..|+++|++ ++|+++++||+||.+|+.+++..++.|+|++|++|.
T Consensus 36 ~~a~~aiviD~~sGkVLy~k-------------n~d~~~~pASlTKlMTayv~~ea~~~gki~~~~~v~ 91 (389)
T COG1686 36 IAAKAAIVIDADSGKVLYSK-------------NADARRPPASLTKLMTAYVVLEALKAGKIKLDDKVT 91 (389)
T ss_pred cccceEEEEECCCCcEeecc-------------CCCCCCCccHHHHHHHHHHHHHHhhccCCCccceec
Confidence 333344444 678888742 668899999999999999999999999999999875
No 465
>cd05153 HomoserineK_II Homoserine Kinase, type II. Homoserine kinase is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This subfamily is composed of unusual homoserine kinases, from a subset of bacteria, which have a PK fold. These proteins do not bear any similarity to the GHMP family homoserine kinases present in most bacteria and eukaryotes. Homoserine kinase catalyzes the transfer of the gamma-phosphoryl group from ATP to L-homoserine producing L-homoserine phosphate, an intermediate in the production of the amino acids threonine, methionine, and isoleucine.
Probab=97.71 E-value=0.00031 Score=78.18 Aligned_cols=32 Identities=22% Similarity=0.262 Sum_probs=27.0
Q ss_pred cCccccCCCCCCeEEccCCCCceEEEeccccccc
Q 002039 285 DGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKL 318 (977)
Q Consensus 285 ~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l 318 (977)
.+++|+|+||+||+++.+ +.+.||||+.+..=
T Consensus 175 ~~l~HgD~~~~Nil~~~~--~~~~iIDfe~a~~g 206 (296)
T cd05153 175 RGVIHADLFRDNVLFDGD--ELSGVIDFYFACTD 206 (296)
T ss_pred CcCCccCcCcccEEEeCC--ceEEEeehhhhcCc
Confidence 689999999999999854 45689999988753
No 466
>PRK15442 beta-lactamase TEM; Provisional
Probab=97.67 E-value=0.0028 Score=69.79 Aligned_cols=36 Identities=31% Similarity=0.478 Sum_probs=33.9
Q ss_pred CCCCcceeecchHHHHHHHHHHHHHCCCcCcCCchh
Q 002039 526 QPDSLFPVFSVTKGITAGMLHWLVDNGKLKLEENIA 561 (977)
Q Consensus 526 t~~T~f~i~SiTK~~ta~~v~~lv~~G~l~ld~~v~ 561 (977)
+.|..|+++|+.|.+++.+++..+++|+++||++|.
T Consensus 57 n~d~~fp~aSt~K~~i~~avl~~v~~g~l~L~~~v~ 92 (284)
T PRK15442 57 RPEERFPMMSTFKVLLCGAVLSRVDAGQEQLGRRIH 92 (284)
T ss_pred cCCCcccchHHHHHHHHHHHHHHHHCCCCCCCceEE
Confidence 568899999999999999999999999999999975
No 467
>cd05152 MPH2' Macrolide 2'-Phosphotransferase (MPH2'). MPH2' is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). MPH2' catalyzes the transfer of the gamma-phosphoryl group from ATP to the 2'-hydroxyl of macrolide antibiotics such as erythromycin, clarithromycin, and azithromycin, among others. Macrolides penetrate the bacterial cell and bind to ribosomes, where it interrupts protein elongation, leading ultimately to the demise of the bacterium. Phosphorylation of macrolides leads to their inactivation. Based on substrate specificity and amino acid sequence, MPH2' is divided into types I and II, encoded by mphA and mphB genes, respectively. MPH2'I inactivates 14-membered ring macrolides while MPH2'II inactivates both 14- and 16-membered ring macrolides. Enzymatic inactivation of macrolides has been reported
Probab=97.65 E-value=0.001 Score=73.32 Aligned_cols=36 Identities=31% Similarity=0.480 Sum_probs=28.9
Q ss_pred cCccccCCCCCCeEEccCCCCce-EEEecccccccCHHH
Q 002039 285 DGFFNGDPHPGNFLVSKDPPHRP-ILLDFGLTKKLSSSM 322 (977)
Q Consensus 285 ~G~~H~D~hPgNIlv~~~~~g~i-~LiDFG~~~~l~~~~ 322 (977)
..++|+|+||+|||++++ +++ .||||+++..=++..
T Consensus 185 ~~lvHGD~~~~Nilv~~~--~~~~gviDWe~a~iGDPa~ 221 (276)
T cd05152 185 TVLVHGDLHPGHILIDED--ARVTGLIDWTEAKVGDPAR 221 (276)
T ss_pred CeeEeCCCCCCcEEEeCC--CCEEEEECcHhcccCCHHH
Confidence 468999999999999853 565 699999988766543
No 468
>cd05156 ChoK_euk Choline Kinase (ChoK) in eukaryotes. The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC) and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. ChoK plays an important role in cell signaling pathways and the regulation of cell growth. Along with PCho, it is involved in malignant transformation through Ras oncogenes in various human cancer
Probab=97.63 E-value=0.00029 Score=78.66 Aligned_cols=37 Identities=22% Similarity=0.299 Sum_probs=29.3
Q ss_pred hcCccccCCCCCCeEEccC--CCCceEEEecccccccCH
Q 002039 284 VDGFFNGDPHPGNFLVSKD--PPHRPILLDFGLTKKLSS 320 (977)
Q Consensus 284 ~~G~~H~D~hPgNIlv~~~--~~g~i~LiDFG~~~~l~~ 320 (977)
..++.|+|+||+|||++.+ .++.+.||||..++.-++
T Consensus 178 ~~~lcH~Dl~~~Nil~~~~~~~~~~i~lIDwEya~~~~p 216 (302)
T cd05156 178 PVVFCHNDLQEGNILLLNPSSETKKLVLIDFEYASYNYR 216 (302)
T ss_pred CceEEecCCCcCeEEecCCCCCCCcEEEEeeCCCCCCCc
Confidence 3578999999999999842 026799999999886544
No 469
>PLN02876 acyl-CoA dehydrogenase
Probab=97.61 E-value=0.00039 Score=88.30 Aligned_cols=107 Identities=13% Similarity=0.160 Sum_probs=67.8
Q ss_pred CCCHHHHHHHHHHHhCCChhhcccccCccccccccccEEEEEEecCC---CEEEEEEecCChhhhhHhhHHHHHHHHHHH
Q 002039 96 PRPVQEVSQTIEREFGESMGGMFMDFVETPLATASIAQVHRATLVDG---RQVVVKVQHQGIKTIILEDLKNAKSIVDWI 172 (977)
Q Consensus 96 ~~~~~~v~~~l~~elg~~~~~~f~~~d~~piasaSigqV~~A~l~~G---~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~ 172 (977)
+++.+.+...+.+.++. +..-...+.-++++.|....+|+.+..+| ..+++|...++....
T Consensus 17 ~~d~~~l~~~l~~~~~~-~~~~~~~~~v~~l~gG~sn~ty~l~~~~~~~~~~~VLR~~p~~~~~~--------------- 80 (822)
T PLN02876 17 RFDEDALLRYAAANVAG-FPVPPSTFKVSQFGHGQSNPTFLLEVGNGGSVKRYVLRKKPPGKLLQ--------------- 80 (822)
T ss_pred cCCHHHHHHHHHHhCCC-cCCCccceeEEEeCCCCcCceEEEEECCCCcceeEEEEeCCCCccCc---------------
Confidence 36677777777766532 11111123457899999999999887554 478888765542100
Q ss_pred HhhCCCCCCchhHHHHhhhcccccCcHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeee-c------CCceEE
Q 002039 173 AWAEPQYDFNPIIDEWCKEAPKELDFNSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ-S------SETVLI 245 (977)
Q Consensus 173 ~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~-~------~~~vLV 245 (977)
...++.+|++.+..+.. ...+.||+++. | +..++|
T Consensus 81 ---------------------~~~~~~rE~~~l~~L~~-----------------~~~vpVP~v~~~~~d~~v~G~~flV 122 (822)
T PLN02876 81 ---------------------SAHAVEREYQVLRALGE-----------------HTDVPVPKVYCLCTDASVIGTAFYI 122 (822)
T ss_pred ---------------------cHHHHHHHHHHHHHHhh-----------------cCCCCCCcEEEEecCCCcCCCceEE
Confidence 01135567777777643 12578899885 3 346899
Q ss_pred eeccCCCCCCC
Q 002039 246 LEFMDGIRLND 256 (977)
Q Consensus 246 mE~i~G~~L~~ 256 (977)
|||++|..+.+
T Consensus 123 ME~v~G~~~~~ 133 (822)
T PLN02876 123 MEYLEGRIFVD 133 (822)
T ss_pred EEecCCcccCC
Confidence 99999987643
No 470
>PRK09902 hypothetical protein; Provisional
Probab=97.59 E-value=0.00066 Score=70.80 Aligned_cols=146 Identities=14% Similarity=0.164 Sum_probs=93.0
Q ss_pred ccCccccccccccEEEEEEecCCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCcH
Q 002039 120 DFVETPLATASIAQVHRATLVDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFN 199 (977)
Q Consensus 120 ~~d~~piasaSigqV~~A~l~~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~ 199 (977)
.+|+---+.|+.+.|++-.+ +|+.+=||-|.-.+...+. .| .-+--|.
T Consensus 20 wve~pN~~rgG~SgV~r~~~-~g~~~ylKrq~nhl~~s~r----------------~P---------------~g~ptf~ 67 (216)
T PRK09902 20 WVEEPNYRRNGMSGVQCVER-NGKKLYVKRMTHHLFHSVR----------------YP---------------FGRPTIV 67 (216)
T ss_pred eecCCCcCCCCcceEEEEEe-CCcEEEEEeccCccccccc----------------CC---------------CCchHHH
Confidence 44444446699999999876 6678889966422221110 01 0233567
Q ss_pred HHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeeec--------CCceEEeeccCC-CCCCChHHHHhcCC---CH
Q 002039 200 SEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQS--------SETVLILEFMDG-IRLNDCESLEAFGV---NK 267 (977)
Q Consensus 200 ~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~~--------~~~vLVmE~i~G-~~L~~~~~~~~~~~---~~ 267 (977)
+|..++.++.+. ++.||++..+ -+.+||+|-++| .+|.++. ..... +.
T Consensus 68 rE~~~L~~L~~~------------------GvPVP~pvf~~~~k~~~~~rA~LVTe~L~g~~~L~~~l--~~~~~~~~~~ 127 (216)
T PRK09902 68 REVAVIKELERA------------------GVIVPKIVFGEAVKIEGEWRALLVTEDMAGFISIADWY--AQHAVSPYSD 127 (216)
T ss_pred HHHHHHHHHHHc------------------CCCCCccceeeeeccCCceEEEEEEEeCCCCccHHHHH--hcCCcCCcch
Confidence 788899988762 4557776641 236899999976 4554442 22112 11
Q ss_pred ---HHHHHHHHHHHHHHHHhcCccccCCCCCCeEEccCCCCceEEEeccccccc
Q 002039 268 ---QKVVEEITRAYAHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKL 318 (977)
Q Consensus 268 ---~~l~~~l~~~~l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l 318 (977)
..+...+.+ .+.++|..|+.|+||-+-||+++.++.-++.||||--++..
T Consensus 128 ~~k~~il~~va~-~ia~LH~~Gv~Hgdly~khIll~~~g~~~v~lIDlEk~r~~ 180 (216)
T PRK09902 128 EVRQAMLKAVAL-AFKKMHSVNRQHGCCYVRHIYVKTEGKAEAGFLDLEKSRRR 180 (216)
T ss_pred HHHHHHHHHHHH-HHHHHHHCCCcCCCCCHhheeecCCCCeeEEEEEhhccchh
Confidence 233443333 37889999999999999999998552224999999766543
No 471
>PF00768 Peptidase_S11: D-alanyl-D-alanine carboxypeptidase This is family S11 in the peptidase classification. ; InterPro: IPR001967 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S11 (D-Ala-D-Ala carboxypeptidase A family, clan SE). The protein fold of the peptidase domain for members of this family resembles that of D-Ala-D-Ala-carboxypeptidase B, the type example for clan SE. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endo-peptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S27) of serine protease have been identified, these being grouped into 6 clans (SA, SB, SC, SE, SF and SG) on the basis of structural similarity and other functional evidence. Structures are known for four of the clans (SA, SB, SC and SE): these appear to be totally unrelated, suggesting at least four evolutionary origins of serine peptidases and possibly many more []. Not with standing their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C clans have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (SA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. Bacterial cell walls are complex structures containing amino acids and amino sugars, with alternating chains of N-acetylglucosamine and N-acetyl-muramic acid units linked by short peptides []: the link peptide in Escherichia coli is L-alanyl-D-isoglutamyl-L-meso-diaminopimelyl-D-alanine. The chains are usually cross-linked between the carboxyl of D-alanine and the free amino group of diaminopimelate. During the synthesis of peptidoglycan, the precursor has the described tetramer sequence with an added C-terminal D-alanine []. D-Ala-D-Ala carboxypeptidase A is involved in the metabolism of cell components []; it is synthesised with a leader peptide to target it to the cell membrane []. After cleavage of the leader peptide, the enzyme is retained in the membrane by a C-terminal anchor. There are three families of serine-type D-Ala-D-Ala peptidase, which are also known as low molecular weight penicillin-binding proteins. Family S11 contains only D-Ala-D-Ala peptidases, unlike families S12 and S13, which contain other enzymes, such as class C beta-lactamases and D-amino-peptidases []. Although these enzymes are serine proteases, some members of family S11 are partially inhibited by thiol-blocking agents [].; GO: 0009002 serine-type D-Ala-D-Ala carboxypeptidase activity, 0006508 proteolysis; PDB: 2BCF_A 1TVF_A 3MFD_B 1ES3_A 1ESI_A 1ES4_A 1ES2_A 1SKF_A 1ES5_A 1J9M_A ....
Probab=97.57 E-value=0.00052 Score=73.85 Aligned_cols=55 Identities=25% Similarity=0.357 Sum_probs=43.1
Q ss_pred CccceEEEEE--ecCeeEEEeeccccCCCCCCCCCCCCcceeecchHHHHHHHHHHHHHCCCcCcCCchh
Q 002039 494 KILGIQVCAY--KDGEVIIDTSAGMLGRYDPRPVQPDSLFPVFSVTKGITAGMLHWLVDNGKLKLEENIA 561 (977)
Q Consensus 494 ~~pG~svaVv--~~g~~v~~~~~G~~~~~~~~~~t~~T~f~i~SiTK~~ta~~v~~lv~~G~l~ld~~v~ 561 (977)
.+.+-+..|+ ..|+++|++ +++..+++||+||.+|+.+++..+++|+|+++++|.
T Consensus 8 ~~~a~saiv~d~~tG~iL~~k-------------n~~~~~~~ASlTKlmTa~~~le~~~~~~l~~~~~v~ 64 (240)
T PF00768_consen 8 EISAKSAIVMDADTGKILYSK-------------NADEKRPPASLTKLMTAYVVLEAIKNGKLSLDDKVT 64 (240)
T ss_dssp --SSSEEEEEETTTSEEEEEE-------------STTSEBE-GGGHHHHHHHHHHHHHHTTSSTTTCEEE
T ss_pred CccceEEEEEECCCCcChhhc-------------ccCceechhhHHHHHHHHHHHHHHHcCCCCcccccc
Confidence 4455566666 468998863 457789999999999999999999999999999764
No 472
>TIGR01767 MTRK 5-methylthioribose kinase. This enzyme is involved in the methionine salvage pathway in certain bacteria.
Probab=97.55 E-value=0.00062 Score=76.67 Aligned_cols=50 Identities=24% Similarity=0.390 Sum_probs=35.8
Q ss_pred cCccccCCCCCCeEEccCCCCceEEEecccccccC--HHHHHHHHHHHHHHHcCC
Q 002039 285 DGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS--SSMKQALAKMFFAAAEGD 337 (977)
Q Consensus 285 ~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~--~~~r~~~~~l~~a~~~~d 337 (977)
..++|+|+||||||++++ .+++|||-++..=+ -+.=.-+.+|+.+.+.++
T Consensus 192 ~~llHGDl~~gNi~~~~~---~~~~iD~e~~~~G~~~~Dlg~~ianL~l~~~~~~ 243 (370)
T TIGR01767 192 ETLLHGDLHSGSIFVSEH---ETKVIDPEFAFYGPIGFDIGQFIANLFLNALSRD 243 (370)
T ss_pred ceeeeccCCcccEEEcCC---CCEEEcCcccccCchHhhHHHHHHHHHHHHhCcc
Confidence 578999999999999744 58899997554333 333445667887766554
No 473
>COG2334 Putative homoserine kinase type II (protein kinase fold) [General function prediction only]
Probab=97.46 E-value=0.0012 Score=74.16 Aligned_cols=41 Identities=22% Similarity=0.229 Sum_probs=29.5
Q ss_pred ccccccccccEEEEEEecCCCEEEEEEecCC-hhhhhHhhHHHH
Q 002039 123 ETPLATASIAQVHRATLVDGRQVVVKVQHQG-IKTIILEDLKNA 165 (977)
Q Consensus 123 ~~piasaSigqV~~A~l~~G~~VAVKv~~p~-i~~~~~~Dl~~l 165 (977)
..++++ +-..||+....+|+. ++||-+|+ .+..+..++..+
T Consensus 31 ~~~l~s-~eN~~f~~~~~~g~~-iLki~~~~~~~~~i~~el~~l 72 (331)
T COG2334 31 LRGLNS-EENSNFRVQTEDGRY-ILKIYRPGWTRAEIPFELALL 72 (331)
T ss_pred cccccc-ccCceEEEEecCCCe-EEEEecCCCCHHHHHHHHHHH
Confidence 357777 888999999888877 99999998 333444444433
No 474
>TIGR00938 thrB_alt homoserine kinase, Neisseria type. Homoserine kinase is required in the biosynthesis of threonine from aspartate.The member of this family from Pseudomonas aeruginosa was shown by direct assay and complementation to act specifically as a homoserine kinase.
Probab=97.45 E-value=0.0012 Score=73.99 Aligned_cols=32 Identities=25% Similarity=0.336 Sum_probs=27.2
Q ss_pred cCccccCCCCCCeEEccCCCCceEEEeccccccc
Q 002039 285 DGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKL 318 (977)
Q Consensus 285 ~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l 318 (977)
.+++|+|+|++||+++.+ +...+|||+.+..=
T Consensus 187 ~~l~HgD~~~~Nvl~~~~--~~~~vIDfd~~~~~ 218 (307)
T TIGR00938 187 RGVIHADLFPDNVLFDGD--SVKGVIDFYFACTD 218 (307)
T ss_pred CccCCCCCCcCcEEEECC--ceEEEeecccccCc
Confidence 799999999999999854 55689999998654
No 475
>PRK10001 D-alanyl-D-alanine carboxypeptidase fraction C; Provisional
Probab=97.42 E-value=0.00058 Score=78.45 Aligned_cols=45 Identities=22% Similarity=0.303 Sum_probs=38.7
Q ss_pred ecCeeEEEeeccccCCCCCCCCCCCCcceeecchHHHHHHHHHHHHHCCCcCcCCchh
Q 002039 504 KDGEVIIDTSAGMLGRYDPRPVQPDSLFPVFSVTKGITAGMLHWLVDNGKLKLEENIA 561 (977)
Q Consensus 504 ~~g~~v~~~~~G~~~~~~~~~~t~~T~f~i~SiTK~~ta~~v~~lv~~G~l~ld~~v~ 561 (977)
..|+++|++ +++..+++||+||.+|+.+++..+++|+++||+.|.
T Consensus 48 ~TG~vL~~k-------------nad~~~~pAS~TKlMTa~v~~e~i~~g~l~ldd~v~ 92 (400)
T PRK10001 48 ASGKVLAEG-------------NADEKLDPASLTKIMTSYVVGQALKADKIKLTDMVT 92 (400)
T ss_pred CCCcChhhc-------------CcCCCcCchHHHHHHHHHHHHHHHHcCCCCCCCEEE
Confidence 568888753 456779999999999999999999999999999763
No 476
>COG3001 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=97.40 E-value=0.0022 Score=66.85 Aligned_cols=94 Identities=20% Similarity=0.327 Sum_probs=67.5
Q ss_pred HHHHHHHHHHHhCCChhhcccccCccccccccccEEEEEEecCCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCC
Q 002039 99 VQEVSQTIEREFGESMGGMFMDFVETPLATASIAQVHRATLVDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQ 178 (977)
Q Consensus 99 ~~~v~~~l~~elg~~~~~~f~~~d~~piasaSigqV~~A~l~~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~ 178 (977)
|..|.+++.+.+|.. ++ -+.+++.-|.|-+.|+... +..++-||+......
T Consensus 2 w~~i~~qlse~~g~~--~i---~er~~v~gG~inea~~v~d-g~~~~FvK~n~~~~~----------------------- 52 (286)
T COG3001 2 WQAISQQLSEQLGEG--EI---KEREEVSGGDINEAWRLRD-GTDPFFVKCNQREQL----------------------- 52 (286)
T ss_pred hHHHHHHHHHHhCch--hh---hcccccCCccccceeEeec-CCcceEEEecchhhH-----------------------
Confidence 677888888999876 32 2346788888888887764 457899997542111
Q ss_pred CCCchhHHHHhhhcccccCcHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeee----cCCceEEeeccCCCCC
Q 002039 179 YDFNPIIDEWCKEAPKELDFNSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ----SSETVLILEFMDGIRL 254 (977)
Q Consensus 179 ~~~~~~~~e~~~~l~~Eld~~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~----~~~~vLVmE~i~G~~L 254 (977)
--|..|+..++.+.+. ..+.||+|+. .+..+|||||++-.++
T Consensus 53 -----------------~~f~AEa~gL~~la~s-----------------~ti~VP~vi~~G~~~~~sylVle~L~~~~~ 98 (286)
T COG3001 53 -----------------SMFTAEADGLELLARS-----------------NTITVPKVIAVGASRDHSYLVLEYLPTGPL 98 (286)
T ss_pred -----------------HHHHHHHHHHHHHHhc-----------------CCccccceEEecCCCCeeEEEEeeccCCCC
Confidence 1256788888887752 3589999996 3556999999997777
Q ss_pred C
Q 002039 255 N 255 (977)
Q Consensus 255 ~ 255 (977)
+
T Consensus 99 d 99 (286)
T COG3001 99 D 99 (286)
T ss_pred C
Confidence 6
No 477
>PRK06149 hypothetical protein; Provisional
Probab=97.37 E-value=0.0012 Score=85.18 Aligned_cols=59 Identities=17% Similarity=0.229 Sum_probs=43.5
Q ss_pred HHHHHhCCCCCCHHHHHHHHHHHhCCChhhcccccCccccccccccEEEEEEecCCCEEEEEEecCCh
Q 002039 87 LKQLQDSLPPRPVQEVSQTIEREFGESMGGMFMDFVETPLATASIAQVHRATLVDGRQVVVKVQHQGI 154 (977)
Q Consensus 87 L~~Lqd~~p~~~~~~v~~~l~~elg~~~~~~f~~~d~~piasaSigqV~~A~l~~G~~VAVKv~~p~i 154 (977)
+..+....|.++.+++++++++.+|-. .+ -+++++..- ++|+.+..+ ..+++||-+|..
T Consensus 7 ~~~~~~~~p~ls~~~~~~ll~~~ygl~-~~------~~~L~s~~d-~nf~v~t~~-~~yVLKi~~~~~ 65 (972)
T PRK06149 7 IDRSSLPAPDVSEAQAERILAEHYGLS-GT------LTELGSQQD-RNFRVDSDG-GRFVLKICHAAY 65 (972)
T ss_pred hccCCCCCCCCCHHHHHHHHHHhcCCc-eE------EEecCCcCc-ceEEEEecC-CcEEEEeCCccC
Confidence 455667789999999999999999854 11 246665554 789887655 467889988754
No 478
>PRK11397 dacD D-alanyl-D-alanine carboxypeptidase; Provisional
Probab=97.34 E-value=0.00051 Score=78.58 Aligned_cols=44 Identities=14% Similarity=0.209 Sum_probs=38.0
Q ss_pred ecCeeEEEeeccccCCCCCCCCCCCCcceeecchHHHHHHHHHHHHHCCCcCcCCch
Q 002039 504 KDGEVIIDTSAGMLGRYDPRPVQPDSLFPVFSVTKGITAGMLHWLVDNGKLKLEENI 560 (977)
Q Consensus 504 ~~g~~v~~~~~G~~~~~~~~~~t~~T~f~i~SiTK~~ta~~v~~lv~~G~l~ld~~v 560 (977)
..|+++|++ +++..+++||+||.+|+.+++..+++|+++||+.|
T Consensus 45 ~tG~vL~~k-------------n~d~~~~pASlTKlMTa~lv~eai~~g~l~ld~~v 88 (388)
T PRK11397 45 TTGQILTAG-------------NEHQQRNPASLTKLMTGYVVDRAIDSHRITPDDIV 88 (388)
T ss_pred CCCcChhhc-------------CcCCCcCCHHHHHHHHHHHHHHHHHcCCCCCCCEE
Confidence 568888753 45677899999999999999999999999999975
No 479
>PLN02236 choline kinase
Probab=97.29 E-value=0.0023 Score=72.89 Aligned_cols=161 Identities=16% Similarity=0.250 Sum_probs=94.0
Q ss_pred HHHHHHHHHhCCChhhc--ccccCccccccccccEEEEEEecC-----CCEEEEEEecCChhhhhHhhHHHHHHHHHHHH
Q 002039 101 EVSQTIEREFGESMGGM--FMDFVETPLATASIAQVHRATLVD-----GRQVVVKVQHQGIKTIILEDLKNAKSIVDWIA 173 (977)
Q Consensus 101 ~v~~~l~~elg~~~~~~--f~~~d~~piasaSigqV~~A~l~~-----G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~ 173 (977)
.+.+++.+ ++..|.++ -+.++-+|+..|-.-++|+....+ ++.|++|+-.++...
T Consensus 18 ~~~~~~~~-~~~~w~~~~~~~~~~i~~l~gGlTN~~y~v~~~~~~~~~~~~~v~Ri~g~~t~~----------------- 79 (344)
T PLN02236 18 ELKRILHS-LASKWGDVVDDEALQVIPLKGAMTNEVFQIKWPTKEGNLGRKVLVRIYGEGVEL----------------- 79 (344)
T ss_pred HHHHHHHH-hcchhcCCCCcCcEEEEEcCCcccceeEEEEeCCCCCCCCCeEEEEEccCCCCe-----------------
Confidence 34455554 55556543 235566788888999999987532 478999987665321
Q ss_pred hhCCCCCCchhHHHHhhhcccccCcHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeeecCCceEEeeccCCCC
Q 002039 174 WAEPQYDFNPIIDEWCKEAPKELDFNSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQSSETVLILEFMDGIR 253 (977)
Q Consensus 174 ~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~~~~~vLVmE~i~G~~ 253 (977)
-+|-.+|.+++..+.+. ++ -|+++.....-.|+||++|.+
T Consensus 80 ---------------------~idR~~E~~~~~~l~~~------------------gl-~P~~~~~~~~g~v~efi~g~~ 119 (344)
T PLN02236 80 ---------------------FFDRDDEIRTFECMSRH------------------GQ-GPRLLGRFPNGRVEEFIHART 119 (344)
T ss_pred ---------------------eechHHHHHHHHHHHHc------------------CC-CCceEEEECCceEEEeeCCCC
Confidence 12445677777776541 12 456655333447899999988
Q ss_pred CCChH--------H-------HHhcC------CCH-HHHHHHH-------------------HHHH---HHHHH-----h
Q 002039 254 LNDCE--------S-------LEAFG------VNK-QKVVEEI-------------------TRAY---AHQIY-----V 284 (977)
Q Consensus 254 L~~~~--------~-------~~~~~------~~~-~~l~~~l-------------------~~~~---l~~i~-----~ 284 (977)
+.... . +.... .+. .++...+ ++.. ++..+ .
T Consensus 120 l~~~~l~~~~~~~~ia~~L~~lH~~~~~~~~~~~~~~~i~~~~~~~~~l~~~~~~~~~~~~~l~~~~~~L~~~~~~~~~~ 199 (344)
T PLN02236 120 LSAADLRDPEISALIAAKLREFHSLDMPGPKNVLLWDRLRNWLKEAKNLCSPEEAKEFRLDSLEDEINLLEKELSGDDQE 199 (344)
T ss_pred CCHHHcCChHHHHHHHHHHHHHhCCCCCCCCCchHHHHHHHHHHHHHhhcCcchhhhcCHHHHHHHHHHHHHHhcccCCC
Confidence 76321 0 00000 010 1111000 0000 11111 2
Q ss_pred cCccccCCCCCCeEEccCCCCceEEEecccccccCH
Q 002039 285 DGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 320 (977)
Q Consensus 285 ~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 320 (977)
..+.|+|+|++|||++++ ++.+.||||..++.-++
T Consensus 200 ~~~cH~Dl~~~Nil~~~~-~~~~~lID~Eya~~~~~ 234 (344)
T PLN02236 200 IGFCHNDLQYGNIMIDEE-TRAITIIDYEYASYNPV 234 (344)
T ss_pred ceEEeCCCCcCcEEEeCC-CCcEEEEeehhccccch
Confidence 478999999999999853 36799999999886544
No 480
>PF10707 YrbL-PhoP_reg: PhoP regulatory network protein YrbL; InterPro: IPR019647 This entry represents proteins that are activated by the protein PhoP. PhoP controls the expression of a large number of genes that mediate adaptation to low Mg2+ environments and/or virulence in several bacterial species. YbrL is proposed to be acting in a loop activity with PhoP and PrmA analogous to the multi-component loop in Salmonella sp., where the PhoP-dependent PmrD protein activates the regulatory protein PmrA, and the activated PmrA then represses transcription from the PmrD promoter which harbours binding sites for both the PhoP and PmrA proteins. Expression of YrbL is induced in low Mg2+ in a PhoP-dependent fashion and repressed by Fe3+ in a PmrA-dependent manner [].
Probab=97.21 E-value=0.0056 Score=63.79 Aligned_cols=155 Identities=16% Similarity=0.151 Sum_probs=90.4
Q ss_pred ccccccccccEEEEEEecCCCEEEEEEecCChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCcHHHH
Q 002039 123 ETPLATASIAQVHRATLVDGRQVVVKVQHQGIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEA 202 (977)
Q Consensus 123 ~~piasaSigqV~~A~l~~G~~VAVKv~~p~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea 202 (977)
..+||+|+-=-||. +++....+|||.+|+........-..+++ ..+... . -++++|.
T Consensus 6 ~~~i~~G~~R~cy~--HP~dp~~cIKV~~~~~~~~~~~~~~~~k~-------~~~~~~----~----------~~~~~E~ 62 (199)
T PF10707_consen 6 SDLIAQGGERDCYQ--HPDDPNLCIKVMRPDRGERRRPFKRWLKR-------LRPKSR----Y----------RQNRREL 62 (199)
T ss_pred CcccccCCCceEEE--CCCCCCeEEEEEccccccccccchhHHHh-------hcccch----h----------HHHHHHH
Confidence 46899999866665 35677899999998761111100011111 111100 1 1234455
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeee--c--CCceEEeeccC---CC---CCCChHHHHhcCCCHHHHHH
Q 002039 203 ENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQ--S--SETVLILEFMD---GI---RLNDCESLEAFGVNKQKVVE 272 (977)
Q Consensus 203 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~--~--~~~vLVmE~i~---G~---~L~~~~~~~~~~~~~~~l~~ 272 (977)
.....+.. . .+.....+|++|. . -..-+|+|.+. |. +|.++ +...+++. ...
T Consensus 63 ~~y~~l~~--~------------~~~~~~~i~r~~G~veT~~G~Glv~e~I~d~dG~~s~TL~~~--l~~~~~~~--~~~ 124 (199)
T PF10707_consen 63 RYYKQLSL--R------------RGVDWSHIPRFYGFVETNLGLGLVVELIRDADGNISPTLEDY--LKEGGLTE--ELR 124 (199)
T ss_pred HHHHHHhh--c------------cCCcccccccEeEEEecCCceEEEEEEEECCCCCcCccHHHH--HHcCCccH--HHH
Confidence 54444431 1 1344678999885 2 33468888873 32 22222 23334444 445
Q ss_pred HHHHHHHHHHHhcCccccCCCCCCeEEccCCCC--ceEEEe-ccccccc
Q 002039 273 EITRAYAHQIYVDGFFNGDPHPGNFLVSKDPPH--RPILLD-FGLTKKL 318 (977)
Q Consensus 273 ~l~~~~l~~i~~~G~~H~D~hPgNIlv~~~~~g--~i~LiD-FG~~~~l 318 (977)
.+++-+.+.++.++|+.+|++|+||++....++ +++||| ||....+
T Consensus 125 ~~L~~f~~~l~~~~Iv~~dl~~~NIv~~~~~~~~~~lvlIDG~G~~~~i 173 (199)
T PF10707_consen 125 QALDEFKRYLLDHHIVIRDLNPHNIVVQRRDSGEFRLVLIDGLGEKELI 173 (199)
T ss_pred HHHHHHHHHHHHcCCeecCCCcccEEEEecCCCceEEEEEeCCCCcccc
Confidence 566667888899999999999999999865433 589999 4655443
No 481
>PRK10793 D-alanyl-D-alanine carboxypeptidase fraction A; Provisional
Probab=97.19 E-value=0.0019 Score=74.49 Aligned_cols=50 Identities=20% Similarity=0.218 Sum_probs=41.3
Q ss_pred EEEEE--ecCeeEEEeeccccCCCCCCCCCCCCcceeecchHHHHHHHHHHHHHCCCcCcCCchh
Q 002039 499 QVCAY--KDGEVIIDTSAGMLGRYDPRPVQPDSLFPVFSVTKGITAGMLHWLVDNGKLKLEENIA 561 (977)
Q Consensus 499 svaVv--~~g~~v~~~~~G~~~~~~~~~~t~~T~f~i~SiTK~~ta~~v~~lv~~G~l~ld~~v~ 561 (977)
+..|+ ..|+++|++ +++..+.+||+||.+|+.+++..+++|+++||+.|.
T Consensus 48 sail~D~~tG~vL~~k-------------nad~~~~pASlTKlMTa~lvleai~~g~l~ld~~v~ 99 (403)
T PRK10793 48 SYILIDYNSGKVLAEQ-------------NADVRRDPASLTKMMTSYVIGQAMKAGKFKETDLVT 99 (403)
T ss_pred EEEEEECCCCcEehhc-------------CcCCCcCCHHHHHHHHHHHHHHHHHcCCCCCCCEEE
Confidence 34444 568888753 457788999999999999999999999999999874
No 482
>PRK11768 serine/threonine protein kinase; Provisional
Probab=97.14 E-value=0.0062 Score=68.85 Aligned_cols=54 Identities=20% Similarity=0.170 Sum_probs=35.3
Q ss_pred CCCCCHHHHHHHHHHHhCCChhhcccccCccccccccccEEEEEEecCCCEEEEEEecCCh
Q 002039 94 LPPRPVQEVSQTIEREFGESMGGMFMDFVETPLATASIAQVHRATLVDGRQVVVKVQHQGI 154 (977)
Q Consensus 94 ~p~~~~~~v~~~l~~elg~~~~~~f~~~d~~piasaSigqV~~A~l~~G~~VAVKv~~p~i 154 (977)
.+..+.+.+...++.- |-..... ..++ .+.-.+||+....+|+.+++|+-+|+-
T Consensus 8 ~~~l~p~~~~~a~~~~-g~~~~~~-----~~~l-~s~eN~vy~v~~~~~~~~vlKv~r~~~ 61 (325)
T PRK11768 8 FQTLTPDLILDALESL-GLRVDGR-----LLAL-NSYENRVYQFGDEDGRRVVAKFYRPER 61 (325)
T ss_pred CCCCChHHHHHHHHHc-CCCCccc-----eEee-ccccceEEEEecCCCCEEEEEEcCccc
Confidence 4556667777777654 5432221 1223 345678999988889999999988763
No 483
>KOG4158 consensus BRPK/PTEN-induced protein kinase [Signal transduction mechanisms]
Probab=96.80 E-value=0.0016 Score=72.11 Aligned_cols=73 Identities=14% Similarity=0.131 Sum_probs=46.2
Q ss_pred CceEEeeccCCCCCCChHHHHhcCCCHHHHHHHHHHHH--HHHHHhcCccccCCCCCCeEEccCCCC--ceEEEeccccc
Q 002039 241 ETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPH--RPILLDFGLTK 316 (977)
Q Consensus 241 ~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g--~i~LiDFG~~~ 316 (977)
.-+|||..-+ .+|..+. .....+...-.-.+.+.+ ..+++++|+-|||+|..|||+.-|+++ .+++.||||+-
T Consensus 317 tlylvMkrY~-~tLr~yl--~~~~~s~r~~~~~laQlLEav~hL~~hgvAhRDlKSDNiL~ElddD~~P~LVvaDFGCcL 393 (598)
T KOG4158|consen 317 TLYLVMKRYR-QTLREYL--WTRHRSYRTGRVILAQLLEAVTHLHKHGVAHRDLKSDNILLELDDDEIPQLVVADFGCCL 393 (598)
T ss_pred eEEEehhcch-hhHHHHH--hcCCCchHHHHHHHHHHHHHHHHHHHccchhhcccccceEEEecCCCCcEEEEcccceee
Confidence 3478887664 3444332 222222222222233332 678899999999999999999655443 68999999974
No 484
>PRK11669 pbpG D-alanyl-D-alanine endopeptidase; Provisional
Probab=96.79 E-value=0.0048 Score=68.31 Aligned_cols=46 Identities=30% Similarity=0.475 Sum_probs=35.7
Q ss_pred EEEEE--ecCeeEEEeeccccCCCCCCCCCCCCcceeecchHHHHHHHHHHHHHCCCcCcCCchh
Q 002039 499 QVCAY--KDGEVIIDTSAGMLGRYDPRPVQPDSLFPVFSVTKGITAGMLHWLVDNGKLKLEENIA 561 (977)
Q Consensus 499 svaVv--~~g~~v~~~~~G~~~~~~~~~~t~~T~f~i~SiTK~~ta~~v~~lv~~G~l~ld~~v~ 561 (977)
+..|+ ..|+++|++ +++..+++||+||.+|+.+++ +++++||++|.
T Consensus 43 aaiv~D~~tG~vL~~k-------------N~d~~~~pASlTKlmTalvvl----e~~l~ld~~v~ 90 (306)
T PRK11669 43 SAMVVDLNTNKVIYSS-------------NPDLVVPIASITKLMTAMVVL----DAKLPLDEKLK 90 (306)
T ss_pred EEEEEECCCCcEEEeE-------------CcCCCcCchHHHHHHHHHHHH----HcCCCCCCEEE
Confidence 34444 578888853 457889999999999999987 35889998774
No 485
>COG3173 Predicted aminoglycoside phosphotransferase [General function prediction only]
Probab=96.61 E-value=0.024 Score=63.18 Aligned_cols=36 Identities=22% Similarity=0.349 Sum_probs=30.2
Q ss_pred cCccccCCCCCCeEEccCCCCceEEEecccccccCHHH
Q 002039 285 DGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSSSM 322 (977)
Q Consensus 285 ~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~~~ 322 (977)
..++|+|.|+|||+++++ +.+.+|||+++..=++..
T Consensus 198 ~~lvHGD~~~gNlii~~~--~~~gVlDwe~~~lGDP~~ 233 (321)
T COG3173 198 PVLVHGDYRPGNLIIDPG--RPTGVLDWELATLGDPLE 233 (321)
T ss_pred ceeeeCCcccCCEEEeCC--CeeEEEeccccccCCcHH
Confidence 579999999999999965 559999999988766543
No 486
>PLN02421 phosphotransferase, alcohol group as acceptor/kinase
Probab=96.59 E-value=0.013 Score=66.28 Aligned_cols=33 Identities=21% Similarity=0.377 Sum_probs=27.8
Q ss_pred ccccCCCCCCeEEccCCCCceEEEecccccccCH
Q 002039 287 FFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSS 320 (977)
Q Consensus 287 ~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~ 320 (977)
+.|.|++|+|||++++ ++++.||||..++.-++
T Consensus 184 ~CHnDl~~~NiL~~~~-~~~l~lID~EYag~nd~ 216 (330)
T PLN02421 184 FAHNDLLSGNLMLNED-EGKLYFIDFEYGSYSYR 216 (330)
T ss_pred EEECCCCcccEEEeCC-CCcEEEEcccccCCCcc
Confidence 7999999999999743 36899999999886554
No 487
>KOG1240 consensus Protein kinase containing WD40 repeats [Signal transduction mechanisms]
Probab=96.41 E-value=0.0004 Score=85.41 Aligned_cols=46 Identities=24% Similarity=0.238 Sum_probs=34.7
Q ss_pred HHHHHHHHHHHHHHHHhcCccccCCCCCCeEEccCCCCceEEEeccccc
Q 002039 268 QKVVEEITRAYAHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTK 316 (977)
Q Consensus 268 ~~l~~~l~~~~l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~ 316 (977)
+.++-.++.+ +.|.|+.|+.|+|||-+||||+.= +=+.|.||..-+
T Consensus 123 kWiaFQLL~a-l~qcH~~gVcHGDIKsENILiTSW--NW~~LtDFAsFK 168 (1431)
T KOG1240|consen 123 KWIAFQLLKA-LSQCHKLGVCHGDIKSENILITSW--NWLYLTDFASFK 168 (1431)
T ss_pred HHHHHHHHHH-HHHHHHcCccccccccceEEEeee--chhhhhcccccC
Confidence 3444444443 889999999999999999999853 457788887644
No 488
>KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning]
Probab=96.05 E-value=0.0061 Score=74.22 Aligned_cols=69 Identities=16% Similarity=0.201 Sum_probs=48.0
Q ss_pred eeccCCCCCCChHHHHhcCCCHHH---HHHHHHHHHHHHHHhcCccccCCCCCCeEEccCCCCceEEEecccccccC
Q 002039 246 LEFMDGIRLNDCESLEAFGVNKQK---VVEEITRAYAHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLS 319 (977)
Q Consensus 246 mE~i~G~~L~~~~~~~~~~~~~~~---l~~~l~~~~l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~ 319 (977)
||||++ .|..+.... ..+...+ +...++.- ++.+|..|+-|||+||.|+++... |.++++|||.+..+.
T Consensus 400 mE~~~~-Dlf~~~~~~-~~~~~~e~~c~fKqL~~G-v~y~h~~GiahrdlK~enll~~~~--g~lki~Dfg~~~vf~ 471 (601)
T KOG0590|consen 400 MEYCPY-DLFSLVMSN-GKLTPLEADCFFKQLLRG-VKYLHSMGLAHRDLKLENLLVTEN--GILKIIDFGAASVFR 471 (601)
T ss_pred hhcccH-HHHHHHhcc-cccchhhhhHHHHHHHHH-HHHHHhcCceeccCccccEEEecC--CceEEeecCcceeec
Confidence 999998 776553211 0122222 22222221 577889999999999999999966 899999999987653
No 489
>PF04655 APH_6_hur: Aminoglycoside/hydroxyurea antibiotic resistance kinase; InterPro: IPR006748 The aminoglycosides are a large group of biologically active bacterial secondary metabolites, best known for their antibiotic properties []. Aminoglycoside phosphotransferases achieve inactivation of these enzymes by phosphorylation, utilising ATP. Likewise, hydroxyurea is inactivated by phosphorylation of the hydroxy group in the hydroxylamine moiety.; GO: 0016773 phosphotransferase activity, alcohol group as acceptor, 0006468 protein phosphorylation, 0019748 secondary metabolic process
Probab=95.97 E-value=0.02 Score=61.95 Aligned_cols=31 Identities=26% Similarity=0.244 Sum_probs=27.6
Q ss_pred cccccccccEEEEEEecCCCEEEEEEecCCh
Q 002039 124 TPLATASIAQVHRATLVDGRQVVVKVQHQGI 154 (977)
Q Consensus 124 ~piasaSigqV~~A~l~~G~~VAVKv~~p~i 154 (977)
.++..|+.+.|++++..+|+++++|+..|.-
T Consensus 8 ~~~~~g~~s~V~pv~~~dG~~avLKl~~p~~ 38 (253)
T PF04655_consen 8 GPPAHGSSSLVVPVRRADGTPAVLKLAPPHA 38 (253)
T ss_pred CCCCCCcceEEEEEEcCCCCeEEEEecCCcc
Confidence 4678899999999999999999999988753
No 490
>PF01633 Choline_kinase: Choline/ethanolamine kinase; InterPro: IPR002573 Choline kinase, (ATP:choline phosphotransferase, 2.7.1.32 from EC) belongs to the choline/ethanolamine kinase family. Ethanolamine and choline are major membrane phospholipids, in the form of glycerophosphoethanolamine and glycerophosphocholine. Ethanolamine is also a component of the glycosylphosphatidylinositol (GPI) anchor, which is necessary for cell-surface protein attachment []. The de novo synthesis of these phospholipids begins with the creation of phosphoethanolamine and phosphocholine by ethanolamine and choline kinases in the first step of the CDP-ethanolamine pathway [, ]. There are two putative choline/ethanolamine kinases (C/EKs) in the Trypanosoma brucei genome. Ethanolamine kinase has no choline kinase activity [] and its activity is inhibited by ADP []. Inositol supplementation represses ethanolamine kinase, decreasing the incorporation of ethanolamine into the CDP-ethanolamine pathway and into phosphatidylethanolamine and phosphatidylcholine []. ; GO: 0016773 phosphotransferase activity, alcohol group as acceptor; PDB: 3C5I_A 2IG7_A 3LQ3_A 3FEG_A 2QG7_E 3FI8_A 1NW1_A 3MES_A 3G15_A 2CKP_B ....
Probab=95.85 E-value=0.023 Score=59.82 Aligned_cols=34 Identities=29% Similarity=0.404 Sum_probs=22.4
Q ss_pred cCccccCCCCCCeEE-ccCCCCceEEEecccccccCH
Q 002039 285 DGFFNGDPHPGNFLV-SKDPPHRPILLDFGLTKKLSS 320 (977)
Q Consensus 285 ~G~~H~D~hPgNIlv-~~~~~g~i~LiDFG~~~~l~~ 320 (977)
..+.|.|++|+|||+ +. ++++.||||-.++.-+.
T Consensus 143 ~v~cHnDl~~~Nil~~~~--~~~~~lIDfEya~~n~~ 177 (211)
T PF01633_consen 143 LVFCHNDLNPGNILINNK--DGEVKLIDFEYAGYNDR 177 (211)
T ss_dssp EEEE-S--SGGGEEETSS--SSCEEE--GTT-EEEEH
T ss_pred ceEeeccCccccEEeccC--CCeEEEecHHHHhhccc
Confidence 468999999999999 43 37999999998876543
No 491
>PTZ00384 choline kinase; Provisional
Probab=95.74 E-value=0.12 Score=59.67 Aligned_cols=102 Identities=18% Similarity=0.163 Sum_probs=63.1
Q ss_pred CCHHHHHHHHHHHhCCChhhc-ccccCccccccccccEEEEEEecCC--CE-----EEEEEecCChhhhhHhhHHHHHHH
Q 002039 97 RPVQEVSQTIEREFGESMGGM-FMDFVETPLATASIAQVHRATLVDG--RQ-----VVVKVQHQGIKTIILEDLKNAKSI 168 (977)
Q Consensus 97 ~~~~~v~~~l~~elg~~~~~~-f~~~d~~piasaSigqV~~A~l~~G--~~-----VAVKv~~p~i~~~~~~Dl~~l~~l 168 (977)
.....+++++.+..+ .|.++ -..++-+++..|--.++|++...++ .. |++++-..+..
T Consensus 29 ~~~~~~~~~~~~~~p-~w~~~~~~~i~i~~l~gGLTN~l~~v~~~~~~~~~~~~k~Vl~R~~g~~~~------------- 94 (383)
T PTZ00384 29 HSHSNLKSLCIRHVP-FWNNVNPEFIEIKKMNNGITNQVYQATLVDGDKDRYPIKSVCIKKSSTYNS------------- 94 (383)
T ss_pred ccHHHHHHHHHHHCC-ccccCCcccEEEEEeCCcccceEEEEEecCCCCCccccceEEEEeccCCCc-------------
Confidence 455677777776655 45433 1345567888899999999986433 22 44443111110
Q ss_pred HHHHHhhCCCCCCchhHHHHhhhcccccCcHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeeecCCceEEeec
Q 002039 169 VDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQSSETVLILEF 248 (977)
Q Consensus 169 ~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~~~~~vLVmE~ 248 (977)
.-+|-.+|.+....+.+. -.-|+++......++.||
T Consensus 95 -------------------------l~IdR~~E~~i~~~Ls~~-------------------glgP~l~~~f~~g~l~ef 130 (383)
T PTZ00384 95 -------------------------LVIDNDLQYNIAKLLGDN-------------------NFGPKIIGRFGDFTIQEW 130 (383)
T ss_pred -------------------------eEeccHHHHHHHHHHHhC-------------------CCCCeEEEecCCEEEEEE
Confidence 112445676666666541 235777776677899999
Q ss_pred cCCCCCCC
Q 002039 249 MDGIRLND 256 (977)
Q Consensus 249 i~G~~L~~ 256 (977)
++|.+++.
T Consensus 131 IeGr~l~~ 138 (383)
T PTZ00384 131 VEGNTMGI 138 (383)
T ss_pred eccccCCh
Confidence 99998864
No 492
>PTZ00296 choline kinase; Provisional
Probab=95.35 E-value=0.27 Score=57.86 Aligned_cols=114 Identities=12% Similarity=0.101 Sum_probs=70.5
Q ss_pred HHHHHHHHhC-CCCCCHHHHHHHHHHHhCCChhhc-ccccCccccccccccEEEEEEecC---------CCEEEEEEecC
Q 002039 84 ISLLKQLQDS-LPPRPVQEVSQTIEREFGESMGGM-FMDFVETPLATASIAQVHRATLVD---------GRQVVVKVQHQ 152 (977)
Q Consensus 84 ~~~L~~Lqd~-~p~~~~~~v~~~l~~elg~~~~~~-f~~~d~~piasaSigqV~~A~l~~---------G~~VAVKv~~p 152 (977)
.++|+.+... .+-...+.+..++.+..+ .|..+ -++++-+|+..|=--++|+.+..+ ++.|+|+|..+
T Consensus 70 ~~~l~~~~~~~~~~~~~~~~~~i~~~~vp-~W~~~~~~~I~i~~l~gGlTN~~f~v~~~~~~~~~~~~~~~~~lvRiyG~ 148 (442)
T PTZ00296 70 KNDIPLCAQEFSDLTDPLYIKKICLEKVP-EWRRFTEDDVRVNQILSGLTNQLFEVSLKEETANNYPSIRRRVLFRIYGK 148 (442)
T ss_pred hhhhhHHHHhhcccCChHHHHHHHHHHCC-ccccCCcccEEEEEecCcccCceEEEEecCCCCccccCcCceEEEEecCC
Confidence 3444444444 344455666666664443 24321 124566899889899999998642 46899998776
Q ss_pred ChhhhhHhhHHHHHHHHHHHHhhCCCCCCchhHHHHhhhcccccCcHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCeE
Q 002039 153 GIKTIILEDLKNAKSIVDWIAWAEPQYDFNPIIDEWCKEAPKELDFNSEAENTRIVSANLGCKNKHEDSNKKPAYEVDVL 232 (977)
Q Consensus 153 ~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~Eld~~~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~ 232 (977)
+....+ |-..|..+...+.+. + .
T Consensus 149 ~te~lI--------------------------------------dR~~E~~v~~~ls~~-g------------------i 171 (442)
T PTZ00296 149 DVDELY--------------------------------------NPISEFEVYKTMSKY-R------------------I 171 (442)
T ss_pred Ccccee--------------------------------------CHHHHHHHHHHHHHC-C------------------C
Confidence 654222 344566676666541 1 2
Q ss_pred eceeeecCCceEEeeccCCCCCC
Q 002039 233 IPEVIQSSETVLILEFMDGIRLN 255 (977)
Q Consensus 233 vP~v~~~~~~vLVmE~i~G~~L~ 255 (977)
-|+++.....+.+.||++|.++.
T Consensus 172 ~P~l~~~f~gg~I~efi~g~~l~ 194 (442)
T PTZ00296 172 APQLLNTFSGGRIEEWLYGDPLR 194 (442)
T ss_pred CCceEEEeCCCEEEEeeCCccCC
Confidence 35555555678899999998665
No 493
>KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only]
Probab=95.15 E-value=0.01 Score=73.37 Aligned_cols=37 Identities=32% Similarity=0.479 Sum_probs=33.6
Q ss_pred HHHHHhcCccccCCCCCCeEEccCCCCceEEEecccccc
Q 002039 279 AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKK 317 (977)
Q Consensus 279 l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~ 317 (977)
++.+|..|++|||+||.|++|+.- |.|++.|||+.+.
T Consensus 156 ~Eylh~ygivhrdlkpdnllIT~m--GhiKlTDfgLsk~ 192 (1205)
T KOG0606|consen 156 VEYLHSYGIVHRDLKPDNLLITSM--GHIKLTDFGLSKK 192 (1205)
T ss_pred hHhhccCCeecCCCCCCcceeeec--ccccccchhhhhh
Confidence 778899999999999999999966 8999999998654
No 494
>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]
Probab=94.90 E-value=0.04 Score=65.08 Aligned_cols=96 Identities=20% Similarity=0.136 Sum_probs=65.7
Q ss_pred cCCceEEeeccCCCCCCChHHHHhcCCCHHHHHHHHHHHH--HHHHHhcCccccCCCCCCeEEccCCCCceEEEeccccc
Q 002039 239 SSETVLILEFMDGIRLNDCESLEAFGVNKQKVVEEITRAY--AHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTK 316 (977)
Q Consensus 239 ~~~~vLVmE~i~G~~L~~~~~~~~~~~~~~~l~~~l~~~~--l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~ 316 (977)
.++.+|+++|+.|..+-..... ..-++.......+++.. +.++|..|++|+|+|+.||+++.+ |.|++.|||..+
T Consensus 69 ~~kl~l~ld~~rgg~lft~l~~-~~~f~~~~~~~~~aelaLald~lh~l~iiyrd~k~enilld~~--Ghi~~tdfglsk 145 (612)
T KOG0603|consen 69 DGKLYLILDFLRGGDLFTRLSK-EVMFDELDVAFYLAELALALDHLHKLGIAYRDYKLENVLLLLE--GHIKLTDFGLSK 145 (612)
T ss_pred ccchhHhhhhcccchhhhcccc-CCchHHHHHHHHHHHHHHHHhhcchhHHHHhcccccceeeccc--CccccCCchhhh
Confidence 6778999999998666433211 11122222333333332 788899999999999999999966 899999999988
Q ss_pred ccCHHHHHHHHHHHHHHHcCCHHHHHHHHHH
Q 002039 317 KLSSSMKQALAKMFFAAAEGDHVALLSAFAE 347 (977)
Q Consensus 317 ~l~~~~r~~~~~l~~a~~~~d~~~~~~~~~~ 347 (977)
.+-+.... +++++-++..+..
T Consensus 146 e~v~~~~~----------cgt~eymApEI~~ 166 (612)
T KOG0603|consen 146 EAVKEKIA----------CGTYEYRAPEIIN 166 (612)
T ss_pred HhHhhhhc----------ccchhhhhhHhhh
Confidence 76554443 5666666655555
No 495
>PRK10271 thiK thiamine kinase; Provisional
Probab=94.59 E-value=0.027 Score=57.86 Aligned_cols=34 Identities=21% Similarity=0.195 Sum_probs=28.3
Q ss_pred cCccccCCCCCCeEEccCCCCceEEEecccccccCHH
Q 002039 285 DGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSSS 321 (977)
Q Consensus 285 ~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~~ 321 (977)
.-..|+|+||+||+++++ | ++||||+.++.-++.
T Consensus 77 ~~p~H~D~~~~N~~~~~~--~-~~lIDwe~a~~gDp~ 110 (188)
T PRK10271 77 LAPLHMDVHAGNLVHSAS--G-LRLIDWEYAGDGDIA 110 (188)
T ss_pred eeeecCCCCCccEEEECC--C-EEEEeCCcccCCCHH
Confidence 456999999999999743 4 999999999877663
No 496
>KOG2269 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=94.56 E-value=0.15 Score=55.87 Aligned_cols=123 Identities=14% Similarity=0.205 Sum_probs=77.1
Q ss_pred HHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCeEeceeeecCCceEEeeccCCCCCCChHHHHhcCCC---HHHHHHHHHH
Q 002039 200 SEAENTRIVSANLGCKNKHEDSNKKPAYEVDVLIPEVIQSSETVLILEFMDGIRLNDCESLEAFGVN---KQKVVEEITR 276 (977)
Q Consensus 200 ~Ea~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~vP~v~~~~~~vLVmE~i~G~~L~~~~~~~~~~~~---~~~l~~~l~~ 276 (977)
+|..|+.|.+. .++.+|.|..-.++||||.|+.-.-+.. ..+....+. .......+..
T Consensus 334 kEmhNL~RMq~------------------~GlpcP~vV~lkkhvLVMsFiGd~~~aA-PkLK~v~l~d~E~~~aY~q~~~ 394 (531)
T KOG2269|consen 334 KEMHNLSRMQK------------------HGLPCPQVVKLKKHVLVMSFIGDQGLAA-PKLKNVELTDDERRNAYDQVQS 394 (531)
T ss_pred HHHHHHHHHHh------------------cCCCCCceeeeecceEEEEeecCCCCCC-ccccccccChHHHHHHHHHHHH
Confidence 56667777654 2566787777788999999994221111 011111111 2222333333
Q ss_pred HHHHHHHhcCccccCCCCCCeEEccCCCCceEEEecccccccCHHHHHHHHHHHHHHHcCCHHHHHHHHHHcCcc
Q 002039 277 AYAHQIYVDGFFNGDPHPGNFLVSKDPPHRPILLDFGLTKKLSSSMKQALAKMFFAAAEGDHVALLSAFAEMGLR 351 (977)
Q Consensus 277 ~~l~~i~~~G~~H~D~hPgNIlv~~~~~g~i~LiDFG~~~~l~~~~r~~~~~l~~a~~~~d~~~~~~~~~~~g~~ 351 (977)
+..+..++.-+||+|+.--|+|... |++.+||-..+...+...-.. .+.+|...|...|...|..
T Consensus 395 ~M~~lY~Ec~LVHADlSEyN~Lw~~---gKvw~IDVsQsvep~HP~~Le-------FL~RDc~Ni~~FF~r~G~p 459 (531)
T KOG2269|consen 395 IMCRLYKECLLVHADLSEYNLLWTP---GKVWVIDVSQSVEPSHPRSLE-------FLTRDCQNIITFFTRIGTP 459 (531)
T ss_pred HHHHHHHhhheeecchhhhhheecC---CceEEEechhccCCCCcchhH-------HHHHHHHHHHHHHHhcCCC
Confidence 3344445678999999999999973 699999998776655433222 2346777788888888875
No 497
>PF12260 PIP49_C: Protein-kinase domain of FAM69; InterPro: IPR022049 Family with sequence similarity 69 has three members (A, B and C). Proteins in this uncharacterised family are described as transmembrane proteins.
Probab=93.44 E-value=0.073 Score=55.11 Aligned_cols=85 Identities=18% Similarity=0.226 Sum_probs=55.7
Q ss_pred EeceeeecCCceEEeeccCCCCCCCh----HHHHhcC-CCHHHHHHHHHHHHHHHHHh---cCccccCCCCCCeEEccCC
Q 002039 232 LIPEVIQSSETVLILEFMDGIRLNDC----ESLEAFG-VNKQKVVEEITRAYAHQIYV---DGFFNGDPHPGNFLVSKDP 303 (977)
Q Consensus 232 ~vP~v~~~~~~vLVmE~i~G~~L~~~----~~~~~~~-~~~~~l~~~l~~~~l~~i~~---~G~~H~D~hPgNIlv~~~~ 303 (977)
++|+++.+..++.|+||+...++... ....... ..+.+++..++++. +.+.. ..+.-+|++|+|+-|+++
T Consensus 21 ~~pk~lG~CG~~~v~E~~~~~~~~~~~~~l~~~~~~~w~~R~~iA~~lL~~l-~~l~~~~~~~~~lcDv~~~nfgv~~~- 98 (188)
T PF12260_consen 21 PFPKLLGSCGRFYVVEYVGAGSLYGIYRPLSQFLQSPWEQRAKIALQLLELL-EELDHGPLGFFYLCDVSPDNFGVNDD- 98 (188)
T ss_pred CCCCeeeECCCEEEEEeecCccccccccccccccccCHHHHHHHHHHHHHHH-HHHhcCCCCcEEEeecchHHeEEeCC-
Confidence 89999986677889999987655311 0110000 11334455555543 33332 458889999999999965
Q ss_pred CCceEEEecccccccC
Q 002039 304 PHRPILLDFGLTKKLS 319 (977)
Q Consensus 304 ~g~i~LiDFG~~~~l~ 319 (977)
|+++++|...+...+
T Consensus 99 -~~lk~iDld~v~~~~ 113 (188)
T PF12260_consen 99 -GRLKLIDLDDVFVED 113 (188)
T ss_pred -CcEEEEechhcchhH
Confidence 899999999886553
No 498
>PF07914 DUF1679: Protein of unknown function (DUF1679); InterPro: IPR012877 This region is found in a number of Caenorhabditis elegans and Caenorhabditis briggsae proteins, in one case (Q19034 from SWISSPROT) as a repeat. In many of the family members, this region is associated with the CHK region described by SMART as being found in zinc finger-C4 and HLH domain-containing kinases. In fact, one member of this family (Q9GUC1 from SWISSPROT) is annotated as being a member of the nuclear hormone receptor family, and contains regions typical of such proteins (IPR000536 from INTERPRO, IPR008946 from INTERPRO, and IPR001628 from INTERPRO).
Probab=93.33 E-value=1.6 Score=51.06 Aligned_cols=34 Identities=24% Similarity=0.388 Sum_probs=26.2
Q ss_pred ccccCCCCCCeEEccCCCCc---eEEEecccccccCH
Q 002039 287 FFNGDPHPGNFLVSKDPPHR---PILLDFGLTKKLSS 320 (977)
Q Consensus 287 ~~H~D~hPgNIlv~~~~~g~---i~LiDFG~~~~l~~ 320 (977)
++|+|+...|||++.+++|. -.||||=++..-++
T Consensus 270 L~HGDLw~~NiLw~k~~~g~~~l~AIIDwQ~vh~G~~ 306 (414)
T PF07914_consen 270 LVHGDLWSSNILWDKDSDGKLKLKAIIDWQCVHRGSP 306 (414)
T ss_pred eecCCccHHheeeecCCchhHHHHHHHHHHHhhcCch
Confidence 69999999999999865553 35899977665443
No 499
>COG5072 ALK1 Serine/threonine kinase of the haspin family [Cell division and chromosome partitioning]
Probab=93.02 E-value=0.43 Score=53.49 Aligned_cols=65 Identities=20% Similarity=0.150 Sum_probs=42.9
Q ss_pred HHhCCCh-hhcccccCccccccccccEEEEEEecCCCEEEEEEecCChh-hhhHhhHHHHHHHHHHH
Q 002039 108 REFGESM-GGMFMDFVETPLATASIAQVHRATLVDGRQVVVKVQHQGIK-TIILEDLKNAKSIVDWI 172 (977)
Q Consensus 108 ~elg~~~-~~~f~~~d~~piasaSigqV~~A~l~~G~~VAVKv~~p~i~-~~~~~Dl~~l~~l~~~~ 172 (977)
+.-|++. .--+..++..|++.+..+-++.|++++...++=++..-+.+ .....|-.+++.+..+.
T Consensus 143 rrk~~~sQ~~ns~~kk~~pvpDqvs~dk~Q~k~~~stsl~~l~s~~~l~~n~~d~d~~nl~QI~q~~ 209 (488)
T COG5072 143 RRKGPFSQFVNSQTKKICPVPDQVSSDKIQAKLADSTSLVSLVSPFGLPGNAQDADVLNLVQILQWC 209 (488)
T ss_pred hccCCcchhccccccccccCcccchhhhhhhhhccCcceeeccccccCCCCccccchHHHHHHHHHh
Confidence 4555522 22355666789999999999999998888887776543322 23455666666666554
No 500
>PF13095 FTA2: Kinetochore Sim4 complex subunit FTA2
Probab=92.87 E-value=1.1 Score=46.70 Aligned_cols=25 Identities=28% Similarity=0.379 Sum_probs=22.8
Q ss_pred cccccccc-cEEEEEEecCCCEEEEEE
Q 002039 124 TPLATASI-AQVHRATLVDGRQVVVKV 149 (977)
Q Consensus 124 ~piasaSi-gqV~~A~l~~G~~VAVKv 149 (977)
+-+|.|+- |.|++++. +|+.+|+|+
T Consensus 43 efLg~g~~~~~V~kv~I-~g~~YALKl 68 (207)
T PF13095_consen 43 EFLGHGSHDGYVFKVEI-DGRIYALKL 68 (207)
T ss_pred eecCCCCceeEEEEEEE-CCeEEEEEE
Confidence 56899999 99999997 789999999
Done!