Query 002043
Match_columns 976
No_of_seqs 503 out of 1809
Neff 5.9
Searched_HMMs 46136
Date Thu Mar 28 15:13:31 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/002043.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/002043hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG2130 Phosphatidylserine-spe 100.0 1.2E-73 2.6E-78 602.8 14.5 395 47-490 1-407 (407)
2 PF13621 Cupin_8: Cupin-like d 100.0 1.7E-36 3.6E-41 323.6 12.3 216 140-370 1-249 (251)
3 KOG2131 Uncharacterized conser 100.0 6.1E-34 1.3E-38 307.7 9.4 311 129-463 27-391 (427)
4 KOG2132 Uncharacterized conser 99.9 6.4E-27 1.4E-31 251.7 4.0 220 130-362 127-355 (355)
5 cd05155 APH_ChoK_like_1 Unchar 99.9 3.1E-21 6.6E-26 206.2 19.0 221 540-910 3-225 (235)
6 KOG2508 Predicted phospholipas 99.8 3.5E-20 7.7E-25 200.8 11.5 230 132-369 24-310 (437)
7 cd05150 APH Aminoglycoside 3'- 99.8 2.1E-19 4.6E-24 192.4 17.3 218 540-908 4-227 (244)
8 cd05152 MPH2' Macrolide 2'-Pho 99.8 3.1E-19 6.6E-24 196.2 17.5 231 526-909 2-246 (276)
9 PF01636 APH: Phosphotransfera 99.8 3E-18 6.5E-23 178.7 12.3 217 543-906 4-228 (239)
10 TIGR02172 Fb_sc_TIGR02172 Fibr 99.7 7.6E-17 1.7E-21 172.4 17.9 203 542-908 7-213 (226)
11 COG3173 Predicted aminoglycosi 99.7 9.4E-17 2E-21 178.7 13.9 204 540-888 28-241 (321)
12 cd05154 ACAD10_11_like Acyl-Co 99.7 8.1E-16 1.8E-20 160.1 17.5 205 543-887 5-217 (223)
13 PLN02876 acyl-CoA dehydrogenas 99.7 1.4E-15 3E-20 190.2 17.9 213 543-886 45-267 (822)
14 PRK10593 hypothetical protein; 99.6 1.3E-14 2.8E-19 161.3 20.7 249 543-945 21-280 (297)
15 TIGR02721 ycfN_thiK thiamine k 99.6 6.1E-15 1.3E-19 159.6 17.7 114 810-970 143-256 (256)
16 cd05153 HomoserineK_II Homoser 99.6 1.5E-14 3.3E-19 159.2 19.6 230 522-907 2-241 (296)
17 PRK05231 homoserine kinase; Pr 99.6 5.4E-14 1.2E-18 156.7 19.7 64 811-907 185-253 (319)
18 TIGR00938 thrB_alt homoserine 99.5 5.1E-13 1.1E-17 148.6 21.0 234 522-907 10-253 (307)
19 COG2850 Uncharacterized conser 99.5 3.1E-14 6.6E-19 157.1 9.5 196 136-371 13-217 (383)
20 PRK11768 serine/threonine prot 99.4 6E-12 1.3E-16 141.7 19.1 235 524-907 16-255 (325)
21 cd05151 ChoK Choline Kinase (C 99.4 2.3E-12 4.9E-17 129.3 14.0 63 812-909 106-168 (170)
22 COG3001 Uncharacterized protei 99.4 1.5E-11 3.3E-16 129.7 18.6 265 520-945 2-271 (286)
23 COG2334 Putative homoserine ki 99.4 1.9E-11 4E-16 137.7 20.1 237 524-907 16-262 (331)
24 PF03881 Fructosamin_kin: Fruc 99.4 7.7E-12 1.7E-16 138.5 15.5 233 520-907 2-243 (288)
25 cd05157 ETNK_euk Ethanolamine 99.3 1.2E-11 2.6E-16 131.6 15.0 46 811-888 168-213 (235)
26 PF02373 JmjC: JmjC domain, hy 99.3 3.5E-13 7.7E-18 127.8 -0.2 110 253-366 1-114 (114)
27 cd05156 ChoK_euk Choline Kinas 99.3 6E-11 1.3E-15 131.4 17.2 48 810-886 176-223 (302)
28 PF08007 Cupin_4: Cupin superf 99.2 1.5E-11 3.2E-16 138.3 9.4 104 250-376 114-218 (319)
29 PLN02236 choline kinase 99.2 3.9E-10 8.5E-15 128.1 18.0 90 810-937 197-302 (344)
30 PRK06148 hypothetical protein; 99.1 7.1E-10 1.5E-14 141.6 18.7 67 811-907 201-270 (1013)
31 PRK06149 hypothetical protein; 99.1 1.2E-09 2.7E-14 139.2 19.8 69 811-907 206-277 (972)
32 KOG2997 F-box protein FBX9 [Ge 99.1 2.4E-11 5.2E-16 131.8 2.4 86 16-113 102-203 (366)
33 PLN02421 phosphotransferase, a 99.1 1.3E-09 2.7E-14 123.3 16.1 67 810-908 179-253 (330)
34 PLN02756 S-methyl-5-thioribose 99.1 1.5E-09 3.2E-14 125.0 15.8 62 542-603 38-107 (418)
35 PRK09550 mtnK methylthioribose 99.1 8.7E-10 1.9E-14 127.1 14.0 112 529-713 18-145 (401)
36 TIGR02906 spore_CotS spore coa 99.0 7.1E-09 1.5E-13 114.9 18.7 64 811-908 185-252 (313)
37 cd05120 APH_ChoK_like Aminogly 99.0 2.8E-09 6.2E-14 102.5 13.3 93 546-714 9-105 (155)
38 PRK10271 thiK thiamine kinase; 99.0 2.8E-09 6.2E-14 110.9 13.5 109 810-967 74-182 (188)
39 KOG1633 F-box protein JEMMA an 99.0 2.9E-09 6.4E-14 130.0 12.0 219 141-376 8-239 (776)
40 TIGR02904 spore_ysxE spore coa 98.9 3.4E-08 7.5E-13 110.3 16.7 65 811-908 194-261 (309)
41 COG3231 Aph Aminoglycoside pho 98.9 4.4E-08 9.6E-13 103.4 16.2 163 671-911 87-252 (266)
42 PF12937 F-box-like: F-box-lik 98.8 1.8E-09 3.8E-14 87.4 3.4 47 21-67 1-47 (47)
43 PF07914 DUF1679: Protein of u 98.8 1.7E-08 3.6E-13 117.4 10.1 169 672-895 149-323 (414)
44 KOG1356 Putative transcription 98.8 7.8E-10 1.7E-14 132.1 -1.3 241 139-383 529-848 (889)
45 PTZ00384 choline kinase; Provi 98.8 3.2E-07 7E-12 105.9 19.8 42 811-886 225-266 (383)
46 KOG3706 Uncharacterized conser 98.8 5.7E-09 1.2E-13 117.9 4.8 112 252-383 319-433 (629)
47 PTZ00296 choline kinase; Provi 98.7 2.2E-07 4.7E-12 109.1 17.6 43 810-886 281-323 (442)
48 PRK14879 serine/threonine prot 98.5 8.1E-07 1.8E-11 92.7 12.0 60 815-908 116-183 (211)
49 TIGR01767 MTRK 5-methylthiorib 98.5 5.8E-07 1.3E-11 102.3 11.2 43 810-886 189-231 (370)
50 PRK12396 5-methylribose kinase 98.5 5.9E-07 1.3E-11 103.3 10.9 42 811-886 225-266 (409)
51 PF04655 APH_6_hur: Aminoglyco 98.4 3.8E-06 8.3E-11 91.8 14.7 132 674-889 70-202 (253)
52 PF01633 Choline_kinase: Choli 98.4 5E-07 1.1E-11 95.2 6.4 45 811-887 141-185 (211)
53 TIGR03724 arch_bud32 Kae1-asso 98.3 4E-06 8.6E-11 86.8 11.6 60 815-908 111-178 (199)
54 PRK01723 3-deoxy-D-manno-octul 98.2 1.5E-05 3.3E-10 86.3 13.0 33 814-879 162-194 (239)
55 PF06293 Kdo: Lipopolysacchari 98.1 1.9E-05 4.1E-10 83.5 12.3 40 673-712 92-135 (206)
56 smart00256 FBOX A Receptor for 98.1 3.8E-06 8.2E-11 65.1 4.9 40 24-63 1-40 (41)
57 PF02958 EcKinase: Ecdysteroid 98.0 2.6E-05 5.7E-10 86.2 10.9 49 810-886 212-260 (294)
58 PRK10359 lipopolysaccharide co 98.0 2.4E-05 5.2E-10 84.5 10.1 41 520-565 21-65 (232)
59 PF00646 F-box: F-box domain; 98.0 4.6E-06 1E-10 67.4 2.8 45 21-65 3-47 (48)
60 smart00587 CHK ZnF_C4 abd HLH 97.9 6.1E-05 1.3E-09 79.1 10.0 70 811-908 118-189 (196)
61 KOG3021 Predicted kinase [Gene 97.9 0.00024 5.3E-09 75.1 14.0 58 811-907 208-265 (313)
62 PRK09605 bifunctional UGMP fam 97.8 7.5E-05 1.6E-09 90.0 11.5 60 815-908 449-515 (535)
63 TIGR02457 TreS_Cterm trehalose 97.7 0.00043 9.3E-09 83.0 14.5 47 545-601 175-224 (528)
64 cd05145 RIO1_like RIO kinase f 97.6 0.00054 1.2E-08 71.3 11.9 15 814-828 138-152 (190)
65 COG3178 Predicted phosphotrans 97.6 0.00013 2.9E-09 80.2 6.7 67 811-906 198-265 (351)
66 PRK15123 lipopolysaccharide co 97.5 0.001 2.2E-08 73.6 13.5 66 816-907 160-233 (268)
67 cd00180 PKc Catalytic domain o 97.5 0.00069 1.5E-08 67.9 10.1 51 545-601 2-59 (215)
68 PRK12274 serine/threonine prot 97.4 0.0013 2.8E-08 70.4 11.8 61 815-911 112-173 (218)
69 KOG3087 Serine/threonine prote 97.4 0.001 2.2E-08 69.3 10.2 63 815-907 134-203 (229)
70 COG3642 Mn2+-dependent serine/ 97.4 0.00076 1.7E-08 70.4 9.2 62 816-911 114-182 (204)
71 COG0510 ycfN Thiamine kinase a 97.3 0.00059 1.3E-08 75.5 8.8 63 813-908 153-218 (269)
72 smart00090 RIO RIO-like kinase 97.3 0.0025 5.3E-08 69.2 12.2 14 815-828 170-183 (237)
73 KOG1164 Casein kinase (serine/ 97.1 0.0036 7.7E-08 70.6 12.1 56 544-603 26-90 (322)
74 cd05144 RIO2_C RIO kinase fami 97.1 0.0039 8.5E-08 65.0 11.6 17 813-829 144-160 (198)
75 TIGR02905 spore_yutH spore coa 97.0 0.026 5.7E-07 63.7 18.0 167 672-908 80-252 (313)
76 cd05119 RIO RIO kinase family, 97.0 0.0056 1.2E-07 62.6 11.2 16 813-828 134-149 (187)
77 cd05147 RIO1_euk RIO kinase fa 96.9 0.0021 4.5E-08 67.3 7.1 15 815-829 139-153 (190)
78 cd05598 STKc_LATS Catalytic do 96.8 0.0064 1.4E-07 69.4 10.3 16 814-829 121-136 (376)
79 cd05626 STKc_LATS2 Catalytic d 96.7 0.0059 1.3E-07 70.1 9.6 16 814-829 121-136 (381)
80 cd05600 STKc_Sid2p_Dbf2p Catal 96.7 0.0069 1.5E-07 67.9 9.6 17 672-688 75-91 (333)
81 cd05628 STKc_NDR1 Catalytic do 96.7 0.0068 1.5E-07 69.0 9.6 16 814-829 121-136 (363)
82 cd05629 STKc_NDR_like_fungal C 96.7 0.0078 1.7E-07 68.8 10.1 17 813-829 120-136 (377)
83 cd05594 STKc_PKB_alpha Catalyt 96.6 0.013 2.8E-07 65.5 11.5 16 814-829 116-131 (325)
84 COG2140 Thermophilic glucose-6 96.6 0.0085 1.8E-07 63.3 9.1 65 256-359 86-152 (209)
85 KOG2120 SCF ubiquitin ligase, 96.6 0.0021 4.5E-08 70.9 4.5 47 20-66 97-143 (419)
86 KOG1989 ARK protein kinase fam 96.6 0.0078 1.7E-07 74.2 9.8 46 669-714 112-163 (738)
87 cd05582 STKc_RSK_N N-terminal 96.6 0.0097 2.1E-07 66.2 9.8 16 814-829 118-133 (318)
88 cd05599 STKc_NDR_like Catalyti 96.5 0.0079 1.7E-07 68.2 9.0 16 814-829 121-136 (364)
89 cd05627 STKc_NDR2 Catalytic do 96.5 0.0098 2.1E-07 67.6 9.6 17 813-829 120-136 (360)
90 cd06649 PKc_MEK2 Catalytic dom 96.5 0.017 3.7E-07 64.8 11.4 16 814-829 124-139 (331)
91 cd05084 PTKc_Fes Catalytic dom 96.5 0.021 4.5E-07 60.7 11.3 16 814-829 114-129 (252)
92 cd05115 PTKc_Zap-70 Catalytic 96.5 0.021 4.5E-07 61.4 11.4 16 814-829 115-130 (257)
93 cd05571 STKc_PKB Catalytic dom 96.4 0.015 3.3E-07 64.9 10.5 16 814-829 115-130 (323)
94 cd05625 STKc_LATS1 Catalytic d 96.4 0.012 2.5E-07 67.5 9.7 16 814-829 121-136 (382)
95 cd05601 STKc_CRIK Catalytic do 96.4 0.015 3.3E-07 64.9 10.4 16 814-829 122-137 (330)
96 cd05597 STKc_DMPK_like Catalyt 96.4 0.013 2.8E-07 65.8 9.8 16 814-829 122-137 (331)
97 PLN00034 mitogen-activated pro 96.4 0.015 3.2E-07 65.9 10.3 16 814-829 188-203 (353)
98 cd06622 PKc_MAPKK_PBS2_like Ca 96.4 0.016 3.4E-07 62.9 10.1 17 813-829 122-138 (286)
99 cd05097 PTKc_DDR_like Catalyti 96.4 0.02 4.3E-07 62.7 11.0 16 814-829 149-164 (295)
100 cd05588 STKc_aPKC Catalytic do 96.4 0.012 2.7E-07 66.0 9.3 16 814-829 116-131 (329)
101 cd07875 STKc_JNK1 Catalytic do 96.4 0.021 4.5E-07 65.0 11.1 16 814-829 146-161 (364)
102 cd05079 PTKc_Jak1_rpt2 Catalyt 96.3 0.024 5.2E-07 61.6 11.1 17 672-688 82-98 (284)
103 cd05573 STKc_ROCK_NDR_like Cat 96.3 0.017 3.6E-07 64.9 10.0 17 813-829 120-136 (350)
104 cd05579 STKc_MAST_like Catalyt 96.3 0.015 3.3E-07 61.5 9.2 17 813-829 112-128 (265)
105 cd05593 STKc_PKB_gamma Catalyt 96.3 0.022 4.9E-07 63.9 10.9 16 814-829 115-130 (328)
106 cd05574 STKc_phototropin_like 96.3 0.023 4.9E-07 62.8 10.7 16 814-829 123-138 (316)
107 cd05595 STKc_PKB_beta Catalyti 96.3 0.014 3.1E-07 65.3 9.0 16 814-829 115-130 (323)
108 PTZ00426 cAMP-dependent protei 96.3 0.019 4E-07 65.2 9.9 16 814-829 151-166 (340)
109 cd05585 STKc_YPK1_like Catalyt 96.3 0.025 5.4E-07 62.8 10.8 16 814-829 113-128 (312)
110 cd05590 STKc_nPKC_eta Catalyti 96.3 0.015 3.1E-07 65.1 8.9 16 814-829 116-131 (320)
111 cd05621 STKc_ROCK2 Catalytic d 96.2 0.019 4.1E-07 65.9 10.0 16 814-829 162-177 (370)
112 cd05102 PTKc_VEGFR3 Catalytic 96.2 0.023 5E-07 63.6 10.5 17 813-829 193-209 (338)
113 cd05596 STKc_ROCK Catalytic do 96.2 0.02 4.4E-07 65.6 10.1 16 814-829 162-177 (370)
114 cd07876 STKc_JNK2 Catalytic do 96.2 0.022 4.7E-07 64.7 10.3 16 814-829 143-158 (359)
115 PTZ00267 NIMA-related protein 96.2 0.027 5.9E-07 67.0 11.5 17 813-829 188-204 (478)
116 cd05587 STKc_cPKC Catalytic do 96.2 0.02 4.3E-07 64.0 9.7 16 814-829 121-136 (324)
117 cd05608 STKc_GRK1 Catalytic do 96.2 0.023 5E-07 61.9 10.1 16 814-829 117-132 (280)
118 cd06623 PKc_MAPKK_plant_like C 96.2 0.025 5.4E-07 60.1 10.0 18 672-689 73-90 (264)
119 PF00069 Pkinase: Protein kina 96.2 0.016 3.5E-07 61.4 8.4 41 672-712 72-115 (260)
120 cd05612 STKc_PRKX_like Catalyt 96.2 0.019 4E-07 63.1 9.2 16 814-829 121-136 (291)
121 cd05602 STKc_SGK1 Catalytic do 96.2 0.024 5.2E-07 63.4 10.1 16 814-829 116-131 (325)
122 cd05614 STKc_MSK2_N N-terminal 96.2 0.029 6.3E-07 62.7 10.8 16 814-829 125-140 (332)
123 cd05615 STKc_cPKC_alpha Cataly 96.2 0.021 4.6E-07 63.9 9.7 16 814-829 121-136 (323)
124 cd05592 STKc_nPKC_theta_delta 96.2 0.019 4.1E-07 64.1 9.3 17 813-829 115-131 (316)
125 KOG4720 Ethanolamine kinase [L 96.2 0.018 3.9E-07 63.9 8.6 36 675-717 152-189 (391)
126 cd06605 PKc_MAPKK Catalytic do 96.2 0.033 7.2E-07 59.4 10.7 17 813-829 120-136 (265)
127 cd05096 PTKc_DDR1 Catalytic do 96.2 0.025 5.4E-07 62.3 10.1 16 814-829 158-173 (304)
128 PTZ00266 NIMA-related protein 96.2 0.039 8.4E-07 70.9 12.9 42 672-713 88-136 (1021)
129 cd05618 STKc_aPKC_iota Catalyt 96.2 0.022 4.7E-07 64.1 9.7 16 814-829 116-131 (329)
130 cd05604 STKc_SGK3 Catalytic do 96.1 0.028 6E-07 62.9 10.5 16 814-829 116-131 (325)
131 cd05122 PKc_STE Catalytic doma 96.1 0.04 8.7E-07 57.5 10.9 17 813-829 117-133 (253)
132 cd05038 PTKc_Jak_rpt2 Catalyti 96.1 0.038 8.3E-07 59.5 11.0 16 814-829 129-144 (284)
133 cd05609 STKc_MAST Catalytic do 96.1 0.029 6.4E-07 61.8 10.4 16 814-829 121-136 (305)
134 cd05603 STKc_SGK2 Catalytic do 96.1 0.029 6.2E-07 62.6 10.3 16 814-829 116-131 (321)
135 smart00558 JmjC A domain famil 96.1 0.005 1.1E-07 51.8 3.2 49 230-282 7-56 (57)
136 KOG0595 Serine/threonine-prote 96.1 0.048 1E-06 62.7 11.9 46 813-885 128-173 (429)
137 cd05591 STKc_nPKC_epsilon Cata 96.1 0.023 5E-07 63.4 9.5 16 814-829 116-131 (321)
138 cd05071 PTKc_Src Catalytic dom 96.1 0.046 9.9E-07 58.8 11.4 17 813-829 121-137 (262)
139 PRK09188 serine/threonine prot 96.1 0.03 6.6E-07 64.7 10.5 17 813-829 130-147 (365)
140 cd05083 PTKc_Chk Catalytic dom 96.1 0.048 1E-06 58.1 11.4 17 813-829 119-135 (254)
141 cd07874 STKc_JNK3 Catalytic do 96.1 0.025 5.5E-07 63.9 9.8 16 814-829 139-154 (355)
142 cd05584 STKc_p70S6K Catalytic 96.1 0.027 5.9E-07 63.0 9.9 16 814-829 120-135 (323)
143 PTZ00263 protein kinase A cata 96.1 0.026 5.6E-07 63.4 9.7 16 814-829 138-153 (329)
144 cd05622 STKc_ROCK1 Catalytic d 96.1 0.031 6.7E-07 64.2 10.5 16 814-829 162-177 (371)
145 cd05589 STKc_PKN Catalytic dom 96.0 0.027 5.8E-07 63.0 9.7 16 814-829 121-136 (324)
146 cd05088 PTKc_Tie2 Catalytic do 96.0 0.036 7.9E-07 61.2 10.6 17 813-829 143-159 (303)
147 cd06650 PKc_MEK1 Catalytic dom 96.0 0.046 1E-06 61.5 11.6 16 814-829 124-139 (333)
148 cd05617 STKc_aPKC_zeta Catalyt 96.0 0.022 4.7E-07 63.9 8.9 16 814-829 116-131 (327)
149 cd08219 STKc_Nek3 Catalytic do 96.0 0.049 1.1E-06 58.0 11.1 16 814-829 120-135 (255)
150 cd05098 PTKc_FGFR1 Catalytic d 96.0 0.029 6.3E-07 61.9 9.4 17 813-829 159-175 (307)
151 COG2187 Uncharacterized protei 96.0 0.031 6.8E-07 61.7 9.2 68 811-909 207-276 (337)
152 cd07848 STKc_CDKL5 Catalytic d 95.9 0.051 1.1E-06 59.0 11.1 16 814-829 120-135 (287)
153 cd07850 STKc_JNK Catalytic dom 95.9 0.037 8E-07 62.6 10.4 16 814-829 138-153 (353)
154 cd05575 STKc_SGK Catalytic dom 95.9 0.041 8.8E-07 61.5 10.5 16 814-829 116-131 (323)
155 cd07871 STKc_PCTAIRE3 Catalyti 95.9 0.036 7.8E-07 60.7 9.9 16 814-829 123-138 (288)
156 cd05610 STKc_MASTL Catalytic d 95.9 0.037 8.1E-07 68.8 11.1 16 814-829 124-139 (669)
157 cd07872 STKc_PCTAIRE2 Catalyti 95.9 0.044 9.5E-07 60.6 10.6 17 813-829 123-139 (309)
158 cd05068 PTKc_Frk_like Catalyti 95.9 0.057 1.2E-06 57.8 11.1 17 813-829 122-138 (261)
159 cd05036 PTKc_ALK_LTK Catalytic 95.9 0.063 1.4E-06 58.1 11.5 16 814-829 136-151 (277)
160 smart00219 TyrKc Tyrosine kina 95.9 0.069 1.5E-06 56.4 11.6 18 672-689 75-92 (258)
161 cd07869 STKc_PFTAIRE1 Catalyti 95.9 0.04 8.6E-07 60.7 10.0 16 814-829 123-138 (303)
162 cd05080 PTKc_Tyk2_rpt2 Catalyt 95.9 0.067 1.5E-06 58.0 11.7 16 814-829 127-142 (283)
163 cd06640 STKc_MST4 Catalytic do 95.9 0.052 1.1E-06 58.8 10.8 16 814-829 121-136 (277)
164 cd05059 PTKc_Tec_like Catalyti 95.9 0.05 1.1E-06 58.1 10.5 15 815-829 121-135 (256)
165 cd08529 STKc_FA2-like Catalyti 95.9 0.055 1.2E-06 57.3 10.6 17 813-829 120-136 (256)
166 cd05624 STKc_MRCK_beta Catalyt 95.8 0.034 7.5E-07 62.4 9.5 17 813-829 121-137 (331)
167 cd05085 PTKc_Fer Catalytic dom 95.8 0.065 1.4E-06 56.7 11.0 17 813-829 112-128 (250)
168 cd05105 PTKc_PDGFR_alpha Catal 95.8 0.045 9.8E-07 63.8 10.6 17 813-829 256-272 (400)
169 cd07862 STKc_CDK6 Catalytic do 95.8 0.06 1.3E-06 58.6 11.0 16 814-829 130-145 (290)
170 cd05094 PTKc_TrkC Catalytic do 95.8 0.058 1.3E-06 59.0 10.9 17 813-829 142-158 (291)
171 cd05611 STKc_Rim15_like Cataly 95.8 0.06 1.3E-06 57.5 10.8 17 672-688 71-87 (260)
172 cd06644 STKc_STK10_LOK Catalyt 95.8 0.066 1.4E-06 58.5 11.2 17 672-688 83-99 (292)
173 cd06621 PKc_MAPKK_Pek1_like Ca 95.8 0.059 1.3E-06 58.8 10.8 17 813-829 124-140 (287)
174 cd08225 STKc_Nek5 Catalytic do 95.8 0.049 1.1E-06 57.7 9.8 16 814-829 121-136 (257)
175 cd05620 STKc_nPKC_delta Cataly 95.7 0.037 8.1E-07 61.7 9.2 16 814-829 116-131 (316)
176 cd05066 PTKc_EphR_A Catalytic 95.7 0.074 1.6E-06 57.2 11.2 16 814-829 126-141 (267)
177 cd08221 STKc_Nek9 Catalytic do 95.7 0.061 1.3E-06 57.2 10.3 16 814-829 121-136 (256)
178 cd05095 PTKc_DDR2 Catalytic do 95.7 0.07 1.5E-06 58.5 11.1 17 813-829 149-165 (296)
179 cd05048 PTKc_Ror Catalytic Dom 95.7 0.073 1.6E-06 57.6 11.0 16 814-829 144-159 (283)
180 cd06613 STKc_MAP4K3_like Catal 95.7 0.092 2E-06 55.8 11.6 17 672-688 74-90 (262)
181 cd05586 STKc_Sck1_like Catalyt 95.7 0.054 1.2E-06 60.6 10.2 16 814-829 116-131 (330)
182 cd05055 PTKc_PDGFR Catalytic d 95.7 0.054 1.2E-06 59.9 10.0 16 814-829 161-176 (302)
183 cd06620 PKc_MAPKK_Byr1_like Ca 95.7 0.066 1.4E-06 58.2 10.5 18 671-688 76-93 (284)
184 cd08228 STKc_Nek6 Catalytic do 95.7 0.064 1.4E-06 57.4 10.3 18 672-689 76-93 (267)
185 cd08220 STKc_Nek8 Catalytic do 95.6 0.08 1.7E-06 56.1 10.8 16 814-829 121-136 (256)
186 cd05101 PTKc_FGFR2 Catalytic d 95.6 0.063 1.4E-06 59.1 10.2 16 814-829 157-172 (304)
187 cd05052 PTKc_Abl Catalytic dom 95.6 0.091 2E-06 56.4 11.1 16 814-829 124-139 (263)
188 cd05093 PTKc_TrkB Catalytic do 95.5 0.087 1.9E-06 57.5 11.0 17 813-829 139-155 (288)
189 cd00192 PTKc Catalytic domain 95.5 0.11 2.3E-06 54.9 11.3 18 672-689 70-87 (262)
190 cd05613 STKc_MSK1_N N-terminal 95.5 0.097 2.1E-06 57.0 11.3 16 814-829 125-140 (290)
191 cd05104 PTKc_Kit Catalytic dom 95.5 0.065 1.4E-06 61.6 10.3 17 813-829 233-249 (375)
192 cd05114 PTKc_Tec_Rlk Catalytic 95.5 0.1 2.2E-06 55.6 11.2 16 814-829 120-135 (256)
193 cd08223 STKc_Nek4 Catalytic do 95.5 0.09 2E-06 55.8 10.8 17 813-829 121-137 (257)
194 cd05570 STKc_PKC Catalytic dom 95.5 0.048 1E-06 60.8 9.0 16 814-829 116-131 (318)
195 cd05116 PTKc_Syk Catalytic dom 95.5 0.12 2.5E-06 55.3 11.6 16 814-829 115-130 (257)
196 PRK13184 pknD serine/threonine 95.5 0.07 1.5E-06 68.1 11.3 17 672-688 76-92 (932)
197 cd05577 STKc_GRK Catalytic dom 95.5 0.072 1.6E-06 57.7 10.1 16 814-829 115-130 (277)
198 cd05616 STKc_cPKC_beta Catalyt 95.5 0.052 1.1E-06 60.7 9.1 16 814-829 121-136 (323)
199 cd05057 PTKc_EGFR_like Catalyt 95.5 0.12 2.5E-06 56.0 11.6 17 813-829 128-144 (279)
200 cd05082 PTKc_Csk Catalytic dom 95.5 0.12 2.6E-06 55.1 11.6 16 814-829 122-137 (256)
201 cd05033 PTKc_EphR Catalytic do 95.5 0.088 1.9E-06 56.5 10.6 17 813-829 125-141 (266)
202 cd05619 STKc_nPKC_theta Cataly 95.5 0.056 1.2E-06 60.4 9.3 16 814-829 116-131 (316)
203 cd08217 STKc_Nek2 Catalytic do 95.4 0.11 2.3E-06 55.0 11.0 18 812-829 128-145 (265)
204 cd05041 PTKc_Fes_like Catalyti 95.4 0.11 2.5E-06 54.9 11.1 16 814-829 113-128 (251)
205 cd05631 STKc_GRK4 Catalytic do 95.4 0.081 1.8E-06 57.8 10.2 17 813-829 121-137 (285)
206 cd05623 STKc_MRCK_alpha Cataly 95.4 0.052 1.1E-06 60.9 8.9 16 814-829 122-137 (332)
207 cd05099 PTKc_FGFR4 Catalytic d 95.4 0.084 1.8E-06 58.6 10.5 17 813-829 153-169 (314)
208 cd08215 STKc_Nek Catalytic dom 95.4 0.099 2.2E-06 55.0 10.5 16 814-829 123-138 (258)
209 cd05607 STKc_GRK7 Catalytic do 95.4 0.1 2.2E-06 56.8 10.7 17 813-829 114-130 (277)
210 cd07878 STKc_p38beta_MAPK11 Ca 95.4 0.082 1.8E-06 59.4 10.3 16 814-829 138-153 (343)
211 cd05034 PTKc_Src_like Catalyti 95.4 0.11 2.4E-06 55.3 10.8 16 814-829 123-138 (261)
212 cd05580 STKc_PKA Catalytic dom 95.4 0.11 2.4E-06 56.8 11.0 17 813-829 120-136 (290)
213 cd06615 PKc_MEK Catalytic doma 95.4 0.11 2.5E-06 57.4 11.2 16 814-829 120-135 (308)
214 KOG0032 Ca2+/calmodulin-depend 95.3 0.12 2.7E-06 60.1 11.8 41 673-713 111-153 (382)
215 cd07832 STKc_CCRK Catalytic do 95.3 0.12 2.5E-06 55.9 10.9 16 814-829 119-134 (286)
216 cd05106 PTKc_CSF-1R Catalytic 95.3 0.067 1.5E-06 61.5 9.5 17 813-829 231-247 (374)
217 cd07837 STKc_CdkB_plant Cataly 95.3 0.11 2.3E-06 56.7 10.7 16 814-829 130-145 (295)
218 cd07847 STKc_CDKL1_4 Catalytic 95.3 0.13 2.9E-06 55.4 11.3 15 815-829 121-135 (286)
219 cd05572 STKc_cGK_PKG Catalytic 95.3 0.11 2.5E-06 55.4 10.6 17 813-829 112-128 (262)
220 cd06610 STKc_OSR1_SPAK Catalyt 95.3 0.11 2.3E-06 55.3 10.3 16 814-829 122-137 (267)
221 cd05075 PTKc_Axl Catalytic dom 95.3 0.14 3E-06 54.9 11.2 17 813-829 131-147 (272)
222 cd05065 PTKc_EphR_B Catalytic 95.3 0.14 3E-06 55.1 11.2 16 814-829 126-141 (269)
223 cd05049 PTKc_Trk Catalytic dom 95.3 0.14 3E-06 55.3 11.2 16 814-829 142-157 (280)
224 cd05067 PTKc_Lck_Blk Catalytic 95.2 0.13 2.9E-06 54.9 11.0 16 814-829 122-137 (260)
225 cd06917 STKc_NAK1_like Catalyt 95.2 0.11 2.3E-06 56.1 10.4 16 814-829 121-136 (277)
226 cd07863 STKc_CDK4 Catalytic do 95.2 0.13 2.9E-06 55.7 11.1 16 814-829 128-143 (288)
227 cd05039 PTKc_Csk_like Catalyti 95.2 0.12 2.5E-06 55.1 10.5 17 813-829 121-137 (256)
228 cd05047 PTKc_Tie Catalytic dom 95.2 0.13 2.9E-06 55.4 11.0 17 813-829 131-147 (270)
229 cd06619 PKc_MKK5 Catalytic dom 95.2 0.13 2.7E-06 56.0 10.7 16 814-829 115-130 (279)
230 cd06642 STKc_STK25-YSK1 Cataly 95.2 0.13 2.9E-06 55.5 10.8 17 813-829 120-136 (277)
231 cd05061 PTKc_InsR Catalytic do 95.2 0.13 2.8E-06 56.1 10.9 17 813-829 138-154 (288)
232 PF06176 WaaY: Lipopolysacchar 95.2 0.031 6.6E-07 60.3 5.7 42 518-564 19-64 (229)
233 cd05073 PTKc_Hck Catalytic dom 95.2 0.12 2.6E-06 55.3 10.4 16 814-829 122-137 (260)
234 cd06641 STKc_MST3 Catalytic do 95.1 0.14 3.1E-06 55.4 10.9 17 813-829 120-136 (277)
235 cd05606 STKc_beta_ARK Catalyti 95.1 0.16 3.5E-06 55.3 11.3 17 813-829 116-132 (278)
236 cd05605 STKc_GRK4_like Catalyt 95.1 0.11 2.5E-06 56.7 10.1 16 814-829 122-137 (285)
237 cd05069 PTKc_Yes Catalytic dom 95.1 0.18 3.9E-06 54.0 11.5 16 814-829 122-137 (260)
238 cd07873 STKc_PCTAIRE1 Catalyti 95.1 0.12 2.6E-06 56.8 10.3 17 813-829 123-139 (301)
239 cd06626 STKc_MEKK4 Catalytic d 95.1 0.12 2.5E-06 55.1 9.9 17 672-688 73-89 (264)
240 cd07870 STKc_PFTAIRE2 Catalyti 95.1 0.13 2.8E-06 56.0 10.5 16 814-829 123-138 (291)
241 PHA03390 pk1 serine/threonine- 95.0 0.22 4.8E-06 54.0 12.0 16 814-829 129-144 (267)
242 cd05090 PTKc_Ror1 Catalytic do 95.0 0.14 3.1E-06 55.5 10.5 17 813-829 143-159 (283)
243 PHA03209 serine/threonine kina 95.0 0.13 2.9E-06 58.5 10.7 16 814-829 177-192 (357)
244 cd05113 PTKc_Btk_Bmx Catalytic 95.0 0.19 4E-06 53.9 11.2 16 814-829 120-135 (256)
245 cd05070 PTKc_Fyn_Yrk Catalytic 95.0 0.15 3.1E-06 54.6 10.4 16 814-829 122-137 (260)
246 cd06609 STKc_MST3_like Catalyt 95.0 0.15 3.2E-06 55.0 10.4 17 813-829 117-133 (274)
247 cd05035 PTKc_Axl_like Catalyti 95.0 0.21 4.5E-06 53.5 11.4 17 813-829 132-148 (273)
248 cd05148 PTKc_Srm_Brk Catalytic 95.0 0.17 3.6E-06 54.0 10.7 16 814-829 124-139 (261)
249 cd05072 PTKc_Lyn Catalytic dom 94.9 0.16 3.4E-06 54.3 10.4 16 814-829 123-138 (261)
250 cd06628 STKc_MAPKKK_Byr2_like 94.9 0.14 3.1E-06 54.8 10.1 16 814-829 126-141 (267)
251 cd07853 STKc_NLK Catalytic dom 94.9 0.12 2.6E-06 59.0 10.1 16 814-829 123-138 (372)
252 cd07846 STKc_CDKL2_3 Catalytic 94.9 0.1 2.2E-06 56.5 9.0 16 814-829 120-135 (286)
253 cd06656 STKc_PAK3 Catalytic do 94.9 0.13 2.8E-06 56.7 9.9 16 814-829 135-150 (297)
254 cd06625 STKc_MEKK3_like Cataly 94.9 0.24 5.1E-06 52.8 11.7 17 672-688 78-94 (263)
255 cd08218 STKc_Nek1 Catalytic do 94.9 0.16 3.5E-06 53.9 10.4 16 814-829 121-136 (256)
256 cd05062 PTKc_IGF-1R Catalytic 94.9 0.17 3.6E-06 54.8 10.5 16 814-829 139-154 (277)
257 cd05100 PTKc_FGFR3 Catalytic d 94.9 0.15 3.3E-06 57.1 10.5 17 813-829 153-169 (334)
258 cd05633 STKc_GRK3 Catalytic do 94.9 0.16 3.4E-06 55.5 10.3 16 814-829 117-132 (279)
259 cd06646 STKc_MAP4K5 Catalytic 94.8 0.18 3.9E-06 54.0 10.6 16 814-829 126-141 (267)
260 cd07835 STKc_CDK1_like Catalyt 94.8 0.18 3.9E-06 54.5 10.7 17 813-829 118-134 (283)
261 cd08224 STKc_Nek6_Nek7 Catalyt 94.8 0.2 4.3E-06 53.4 10.9 16 814-829 126-141 (267)
262 PHA03211 serine/threonine kina 94.8 0.14 3.1E-06 61.0 10.7 16 814-829 280-295 (461)
263 cd05050 PTKc_Musk Catalytic do 94.8 0.16 3.5E-06 55.3 10.2 17 813-829 149-165 (288)
264 cd05060 PTKc_Syk_like Catalyti 94.8 0.21 4.5E-06 53.3 10.9 16 814-829 115-130 (257)
265 PTZ00284 protein kinase; Provi 94.8 0.16 3.4E-06 60.2 10.9 17 813-829 251-267 (467)
266 cd05632 STKc_GRK5 Catalytic do 94.8 0.17 3.7E-06 55.3 10.4 16 814-829 122-137 (285)
267 cd06638 STKc_myosinIIIA Cataly 94.7 0.22 4.7E-06 54.0 11.0 17 672-688 94-110 (286)
268 cd07859 STKc_TDY_MAPK_plant Ca 94.7 0.17 3.6E-06 56.4 10.4 16 814-829 123-138 (338)
269 cd05042 PTKc_Aatyk Catalytic d 94.7 0.21 4.5E-06 53.7 10.7 16 814-829 120-135 (269)
270 cd05081 PTKc_Jak2_Jak3_rpt2 Ca 94.7 0.25 5.5E-06 53.5 11.4 16 814-829 128-143 (284)
271 cd05108 PTKc_EGFR Catalytic do 94.7 0.2 4.3E-06 55.7 10.7 16 814-829 129-144 (316)
272 cd07867 STKc_CDC2L6 Catalytic 94.7 0.24 5.3E-06 54.5 11.4 17 813-829 127-143 (317)
273 cd05109 PTKc_HER2 Catalytic do 94.6 0.26 5.6E-06 53.3 11.3 16 814-829 129-144 (279)
274 cd05630 STKc_GRK6 Catalytic do 94.6 0.22 4.7E-06 54.5 10.7 17 813-829 121-137 (285)
275 cd05045 PTKc_RET Catalytic dom 94.6 0.2 4.3E-06 54.7 10.4 17 813-829 146-162 (290)
276 KOG0583 Serine/threonine prote 94.6 0.24 5.2E-06 57.5 11.4 35 812-878 138-172 (370)
277 cd06654 STKc_PAK1 Catalytic do 94.6 0.29 6.3E-06 53.8 11.7 17 672-688 91-107 (296)
278 cd05054 PTKc_VEGFR Catalytic d 94.6 0.2 4.3E-06 56.6 10.6 16 814-829 193-208 (337)
279 PTZ00036 glycogen synthase kin 94.5 0.23 4.9E-06 58.7 11.2 17 813-829 189-205 (440)
280 cd05123 STKc_AGC Catalytic dom 94.5 0.24 5.1E-06 52.3 10.3 17 813-829 112-128 (250)
281 cd05089 PTKc_Tie1 Catalytic do 94.5 0.23 5E-06 54.5 10.6 17 813-829 138-154 (297)
282 cd07845 STKc_CDK10 Catalytic d 94.5 0.25 5.5E-06 54.4 10.9 16 814-829 128-143 (309)
283 cd05112 PTKc_Itk Catalytic dom 94.5 0.28 6E-06 52.2 10.8 16 814-829 120-135 (256)
284 cd05063 PTKc_EphR_A2 Catalytic 94.5 0.25 5.3E-06 53.0 10.5 16 814-829 127-142 (268)
285 cd06636 STKc_MAP4K4_6 Catalyti 94.5 0.2 4.4E-06 54.2 9.9 17 813-829 140-156 (282)
286 cd07868 STKc_CDK8 Catalytic do 94.4 0.4 8.6E-06 53.0 12.4 17 813-829 127-143 (317)
287 cd05581 STKc_PDK1 Catalytic do 94.4 0.15 3.3E-06 54.6 8.8 16 814-829 122-137 (280)
288 cd05040 PTKc_Ack_like Catalyti 94.4 0.3 6.5E-06 51.9 10.9 16 814-829 117-132 (257)
289 cd05056 PTKc_FAK Catalytic dom 94.4 0.27 6E-06 52.8 10.7 17 813-829 126-142 (270)
290 PF00190 Cupin_1: Cupin; Inte 94.4 0.089 1.9E-06 52.6 6.4 77 258-369 42-122 (144)
291 cd05051 PTKc_DDR Catalytic dom 94.3 0.26 5.6E-06 53.7 10.5 16 814-829 150-165 (296)
292 PHA03212 serine/threonine kina 94.3 0.27 5.9E-06 57.1 11.2 16 814-829 202-217 (391)
293 PF06881 Elongin_A: RNA polyme 94.3 0.035 7.6E-07 53.3 3.1 67 18-86 1-72 (109)
294 cd07836 STKc_Pho85 Catalytic d 94.2 0.3 6.5E-06 52.8 10.6 16 814-829 120-135 (284)
295 cd06629 STKc_MAPKKK_Bck1_like 94.2 0.46 9.9E-06 51.1 12.0 16 814-829 128-143 (272)
296 cd06657 STKc_PAK4 Catalytic do 94.2 0.25 5.5E-06 54.4 10.2 16 814-829 136-151 (292)
297 TIGR03404 bicupin_oxalic bicup 94.2 0.15 3.3E-06 59.1 8.6 62 258-358 253-314 (367)
298 cd07861 STKc_CDK1_euk Catalyti 94.1 0.29 6.4E-06 52.8 10.3 17 813-829 120-136 (285)
299 cd05118 STKc_CMGC Catalytic do 94.1 0.28 6.1E-06 52.7 10.0 16 814-829 118-133 (283)
300 cd07839 STKc_CDK5 Catalytic do 94.1 0.27 5.8E-06 53.2 9.9 16 814-829 119-134 (284)
301 KOG3653 Transforming growth fa 94.0 0.13 2.9E-06 60.1 7.7 42 672-713 282-325 (534)
302 cd06652 STKc_MEKK2 Catalytic d 94.0 0.38 8.2E-06 51.5 10.9 15 815-829 127-141 (265)
303 cd07880 STKc_p38gamma_MAPK12 C 94.0 0.33 7.2E-06 54.8 10.8 16 814-829 138-153 (343)
304 cd06658 STKc_PAK5 Catalytic do 94.0 0.22 4.7E-06 54.8 9.0 16 814-829 138-153 (292)
305 cd06624 STKc_ASK Catalytic dom 93.9 0.36 7.7E-06 51.9 10.4 17 672-688 79-95 (268)
306 cd05092 PTKc_TrkA Catalytic do 93.9 0.37 8.1E-06 52.3 10.7 17 813-829 141-157 (280)
307 cd06637 STKc_TNIK Catalytic do 93.9 0.35 7.6E-06 51.8 10.3 16 814-829 131-146 (272)
308 cd05053 PTKc_FGFR Catalytic do 93.9 0.41 8.8E-06 52.1 10.9 17 813-829 151-167 (293)
309 cd06659 STKc_PAK6 Catalytic do 93.8 0.31 6.7E-06 53.7 10.0 16 814-829 137-152 (297)
310 KOG2132 Uncharacterized conser 93.8 0.019 4.1E-07 64.0 0.3 96 256-359 180-279 (355)
311 cd06633 STKc_TAO3 Catalytic do 93.8 0.52 1.1E-05 52.4 11.7 16 814-829 141-156 (313)
312 cd05064 PTKc_EphR_A10 Catalyti 93.8 0.45 9.6E-06 51.3 10.8 16 814-829 127-142 (266)
313 cd06655 STKc_PAK2 Catalytic do 93.7 0.42 9.2E-06 52.6 10.7 16 673-688 91-106 (296)
314 cd06643 STKc_SLK Catalytic dom 93.7 0.54 1.2E-05 50.9 11.3 16 814-829 123-138 (282)
315 KOG0596 Dual specificity; seri 93.6 0.093 2E-06 62.4 5.5 42 545-589 371-418 (677)
316 PHA02988 hypothetical protein; 93.6 0.38 8.1E-06 52.8 10.0 17 672-688 96-112 (283)
317 cd07840 STKc_CDK9_like Catalyt 93.5 0.4 8.6E-06 51.6 10.0 16 814-829 120-135 (287)
318 PTZ00024 cyclin-dependent prot 93.5 0.39 8.5E-06 53.7 10.2 17 813-829 138-154 (335)
319 cd06612 STKc_MST1_2 Catalytic 93.5 0.45 9.8E-06 50.3 10.2 17 672-688 72-88 (256)
320 cd05087 PTKc_Aatyk1_Aatyk3 Cat 93.5 0.58 1.3E-05 50.3 11.1 17 813-829 119-135 (269)
321 cd07844 STKc_PCTAIRE_like Cata 93.3 0.46 9.9E-06 51.7 10.1 16 814-829 123-138 (291)
322 cd06607 STKc_TAO Catalytic dom 93.2 0.48 1.1E-05 52.3 10.3 16 814-829 135-150 (307)
323 cd06635 STKc_TAO1 Catalytic do 93.2 0.65 1.4E-05 51.7 11.3 17 813-829 144-160 (317)
324 cd06618 PKc_MKK7 Catalytic dom 93.1 0.35 7.5E-06 53.0 8.9 16 814-829 135-150 (296)
325 cd07841 STKc_CDK7 Catalytic do 93.1 0.56 1.2E-05 51.2 10.5 15 815-829 123-137 (298)
326 cd05032 PTKc_InsR_like Catalyt 93.1 0.48 1E-05 50.9 9.8 17 813-829 138-154 (277)
327 TIGR03037 anthran_nbaC 3-hydro 93.1 0.43 9.4E-06 48.9 8.7 78 251-369 29-106 (159)
328 cd05111 PTK_HER3 Pseudokinase 93.1 0.7 1.5E-05 50.2 11.2 16 814-829 129-144 (279)
329 KOG0615 Serine/threonine prote 93.1 0.67 1.4E-05 53.8 11.0 33 814-876 296-328 (475)
330 cd05086 PTKc_Aatyk2 Catalytic 93.1 0.81 1.8E-05 49.4 11.5 16 814-829 119-134 (268)
331 KOG0192 Tyrosine kinase specif 93.1 0.65 1.4E-05 53.8 11.2 15 815-829 164-178 (362)
332 cd07843 STKc_CDC2L1 Catalytic 93.1 0.61 1.3E-05 50.8 10.6 16 814-829 126-141 (293)
333 cd07842 STKc_CDK8_like Catalyt 93.1 0.63 1.4E-05 51.1 10.8 16 814-829 128-143 (316)
334 PLN00113 leucine-rich repeat r 93.0 0.54 1.2E-05 60.8 11.7 41 672-712 757-797 (968)
335 cd07838 STKc_CDK4_6_like Catal 93.0 0.84 1.8E-05 49.2 11.5 16 814-829 127-142 (287)
336 KOG1165 Casein kinase (serine/ 93.0 0.72 1.6E-05 52.3 10.8 51 544-602 36-93 (449)
337 KOG1187 Serine/threonine prote 93.0 0.68 1.5E-05 53.6 11.2 20 811-830 194-213 (361)
338 cd05107 PTKc_PDGFR_beta Cataly 92.9 0.62 1.3E-05 54.5 11.0 17 813-829 258-274 (401)
339 cd05103 PTKc_VEGFR2 Catalytic 92.9 0.68 1.5E-05 52.3 11.0 18 812-829 197-214 (343)
340 cd05576 STKc_RPK118_like Catal 92.9 0.22 4.7E-06 52.9 6.5 17 813-829 104-120 (237)
341 cd07855 STKc_ERK5 Catalytic do 92.7 0.56 1.2E-05 52.6 9.9 16 814-829 127-142 (334)
342 cd08216 PK_STRAD Pseudokinase 92.7 0.88 1.9E-05 50.1 11.3 16 814-829 121-136 (314)
343 PRK13264 3-hydroxyanthranilate 92.6 0.51 1.1E-05 49.1 8.5 76 251-367 35-110 (177)
344 cd07834 STKc_MAPK Catalytic do 92.5 0.53 1.2E-05 52.4 9.4 16 814-829 123-138 (330)
345 cd07860 STKc_CDK2_3 Catalytic 92.5 0.82 1.8E-05 49.4 10.6 17 813-829 119-135 (284)
346 cd05091 PTKc_Ror2 Catalytic do 92.5 0.78 1.7E-05 49.7 10.4 17 813-829 143-159 (283)
347 PHA03207 serine/threonine kina 92.5 0.61 1.3E-05 53.9 10.1 16 814-829 205-220 (392)
348 cd07866 STKc_BUR1 Catalytic do 92.4 0.95 2.1E-05 49.5 11.0 16 814-829 135-150 (311)
349 KOG0281 Beta-TrCP (transducin 92.3 0.13 2.8E-06 57.8 4.0 50 21-70 75-128 (499)
350 cd05110 PTKc_HER4 Catalytic do 92.3 0.88 1.9E-05 50.2 10.6 16 814-829 129-144 (303)
351 PF06560 GPI: Glucose-6-phosph 92.2 0.25 5.4E-06 51.8 5.8 39 331-369 108-146 (182)
352 PRK04190 glucose-6-phosphate i 92.2 0.63 1.4E-05 49.2 8.8 27 333-359 120-146 (191)
353 cd05037 PTK_Jak_rpt1 Pseudokin 92.1 0.45 9.9E-06 50.4 7.9 16 814-829 121-136 (259)
354 cd07865 STKc_CDK9 Catalytic do 92.1 1.1 2.4E-05 48.9 11.1 16 814-829 139-154 (310)
355 cd07858 STKc_TEY_MAPK_plant Ca 92.0 0.93 2E-05 50.9 10.5 16 814-829 128-143 (337)
356 cd07849 STKc_ERK1_2_like Catal 91.9 0.78 1.7E-05 51.5 9.8 16 814-829 126-141 (336)
357 TIGR01982 UbiB 2-polyprenylphe 91.8 0.16 3.5E-06 60.1 4.4 61 814-907 277-339 (437)
358 cd07857 STKc_MPK1 Catalytic do 91.7 0.91 2E-05 50.9 10.1 16 814-829 125-140 (332)
359 cd07830 STKc_MAK_like Catalyti 91.6 0.92 2E-05 48.9 9.7 16 814-829 119-134 (283)
360 KOG0605 NDR and related serine 91.5 0.34 7.3E-06 57.6 6.4 47 540-589 144-200 (550)
361 PF07883 Cupin_2: Cupin domain 91.4 0.55 1.2E-05 40.3 6.2 58 258-359 6-63 (71)
362 cd05074 PTKc_Tyro3 Catalytic d 91.4 1.7 3.6E-05 46.6 11.4 16 814-829 133-148 (273)
363 cd07877 STKc_p38alpha_MAPK14 C 91.3 1.2 2.5E-05 50.4 10.5 16 814-829 140-155 (345)
364 cd07864 STKc_CDK12 Catalytic d 91.3 1.3 2.9E-05 48.2 10.6 16 814-829 136-151 (302)
365 KOG0581 Mitogen-activated prot 91.2 0.31 6.8E-06 55.6 5.6 18 812-829 197-214 (364)
366 KOG4250 TANK binding protein k 91.2 0.67 1.5E-05 56.8 8.6 47 812-887 138-184 (732)
367 PRK14705 glycogen branching en 91.0 1.7 3.7E-05 57.4 12.6 47 545-601 154-206 (1224)
368 COG3570 StrB Streptomycin 6-ki 90.9 0.8 1.7E-05 49.0 7.8 82 811-936 159-243 (274)
369 cd07856 STKc_Sty1_Hog1 Catalyt 90.8 1.2 2.6E-05 50.0 10.0 16 814-829 128-143 (328)
370 KOG2686 Choline kinase [Cell w 90.8 1.5 3.2E-05 50.5 10.5 44 810-885 209-252 (366)
371 PLN00009 cyclin-dependent kina 90.8 1.8 3.8E-05 47.2 11.0 16 814-829 122-137 (294)
372 cd06616 PKc_MKK4 Catalytic dom 90.8 1.3 2.9E-05 48.0 10.0 17 813-829 127-143 (288)
373 PTZ00283 serine/threonine prot 90.8 0.47 1E-05 57.1 7.0 17 813-829 162-178 (496)
374 PRK10345 hypothetical protein; 90.8 2.8 6E-05 44.9 12.0 56 541-599 7-67 (210)
375 cd06639 STKc_myosinIIIB Cataly 90.6 0.58 1.3E-05 50.9 7.0 17 813-829 147-163 (291)
376 cd07852 STKc_MAPK15 Catalytic 90.5 2 4.3E-05 48.1 11.3 16 814-829 127-142 (337)
377 cd06617 PKc_MKK3_6 Catalytic d 90.2 1.7 3.7E-05 46.8 10.1 17 813-829 123-139 (283)
378 cd08528 STKc_Nek10 Catalytic d 90.2 0.78 1.7E-05 49.2 7.4 17 672-688 83-99 (269)
379 cd07851 STKc_p38 Catalytic dom 89.9 1.1 2.5E-05 50.4 8.8 16 814-829 138-153 (343)
380 KOG3926 F-box proteins [Amino 89.8 0.29 6.2E-06 53.6 3.5 66 20-85 201-276 (332)
381 PRK04750 ubiB putative ubiquin 89.6 0.27 5.9E-06 59.7 3.6 64 814-906 280-345 (537)
382 cd06634 STKc_TAO2 Catalytic do 89.5 2.2 4.7E-05 47.3 10.5 17 813-829 134-150 (308)
383 cd06630 STKc_MEKK1 Catalytic d 89.4 0.89 1.9E-05 48.5 7.0 18 671-688 76-93 (268)
384 cd07879 STKc_p38delta_MAPK13 C 89.2 2.6 5.6E-05 47.6 10.9 16 814-829 137-152 (342)
385 cd07854 STKc_MAPK4_6 Catalytic 89.2 1.9 4.1E-05 48.6 9.9 16 814-829 134-149 (342)
386 KOG0616 cAMP-dependent protein 89.1 0.8 1.7E-05 51.3 6.3 19 812-830 162-180 (355)
387 KOG0667 Dual-specificity tyros 88.7 0.46 1E-05 57.6 4.6 36 811-877 306-341 (586)
388 KOG0198 MEKK and related serin 88.7 1.2 2.6E-05 50.6 7.7 17 813-829 136-152 (313)
389 cd05583 STKc_MSK_N N-terminal 88.7 1 2.2E-05 48.9 7.0 16 814-829 125-140 (288)
390 cd06648 STKc_PAK_II Catalytic 88.6 1.1 2.3E-05 49.0 7.1 16 814-829 135-150 (285)
391 KOG0593 Predicted protein kina 88.4 0.67 1.4E-05 52.0 5.2 78 764-888 85-166 (396)
392 cd05146 RIO3_euk RIO kinase fa 87.7 0.98 2.1E-05 48.0 5.8 31 750-780 63-93 (197)
393 KOG4236 Serine/threonine prote 87.2 3.3 7.1E-05 49.6 10.0 17 672-688 637-653 (888)
394 cd05058 PTKc_Met_Ron Catalytic 87.1 1.5 3.2E-05 46.7 6.9 17 813-829 117-133 (262)
395 KOG0612 Rho-associated, coiled 86.3 1.2 2.6E-05 57.3 6.4 20 812-831 193-212 (1317)
396 PF01163 RIO1: RIO1 family; I 86.3 0.47 1E-05 50.0 2.5 56 813-908 126-182 (188)
397 COG0662 {ManC} Mannose-6-phosp 86.0 3 6.6E-05 41.0 7.8 26 333-358 75-100 (127)
398 COG1917 Uncharacterized conser 86.0 3.6 7.7E-05 40.3 8.4 67 254-364 47-115 (131)
399 cd06627 STKc_Cdc7_like Catalyt 85.9 3.1 6.7E-05 43.7 8.5 43 672-714 73-118 (254)
400 PF06052 3-HAO: 3-hydroxyanthr 85.7 2.6 5.7E-05 42.7 7.2 75 250-365 33-107 (151)
401 KOG0670 U4/U6-associated splic 85.6 0.69 1.5E-05 55.0 3.5 20 811-830 553-572 (752)
402 TIGR03404 bicupin_oxalic bicup 85.3 4.2 9E-05 47.4 9.8 65 254-359 72-136 (367)
403 smart00835 Cupin_1 Cupin. This 85.2 4.3 9.4E-05 40.6 8.7 63 258-358 38-100 (146)
404 KOG0274 Cdc4 and related F-box 85.1 0.47 1E-05 57.7 2.0 50 21-70 108-157 (537)
405 cd08530 STKc_CNK2-like Catalyt 85.1 2.7 5.8E-05 44.3 7.6 43 672-714 73-122 (256)
406 cd06611 STKc_SLK_like Catalyti 84.7 3.3 7.1E-05 44.7 8.2 43 672-714 76-122 (280)
407 PHA02882 putative serine/threo 84.7 0.59 1.3E-05 51.4 2.4 17 813-829 145-161 (294)
408 smart00221 STYKc Protein kinas 84.5 3.8 8.3E-05 41.9 8.3 43 672-714 71-117 (225)
409 KOG1166 Mitotic checkpoint ser 84.0 0.97 2.1E-05 58.1 4.2 43 920-970 913-955 (974)
410 KOG0594 Protein kinase PCTAIRE 84.0 0.64 1.4E-05 52.7 2.3 20 811-830 137-156 (323)
411 PRK09902 hypothetical protein; 83.4 11 0.00023 40.9 11.1 42 673-714 100-147 (216)
412 KOG0578 p21-activated serine/t 83.3 2.8 6E-05 50.5 7.3 44 920-965 496-539 (550)
413 TIGR02466 conserved hypothetic 83.2 4.8 0.0001 43.0 8.4 95 252-367 98-199 (201)
414 KOG1163 Casein kinase (serine/ 83.1 0.81 1.8E-05 49.9 2.6 18 811-828 128-145 (341)
415 COG0661 AarF Predicted unusual 83.1 0.77 1.7E-05 55.6 2.7 55 813-900 284-340 (517)
416 cd06608 STKc_myosinIII_like Ca 83.1 5.1 0.00011 42.6 8.8 43 672-714 83-132 (275)
417 KOG0577 Serine/threonine prote 83.0 0.57 1.2E-05 56.4 1.5 39 815-886 147-185 (948)
418 cd08229 STKc_Nek7 Catalytic do 82.9 4.1 8.8E-05 43.5 7.9 43 672-714 76-125 (267)
419 KOG1235 Predicted unusual prot 82.8 1.3 2.8E-05 53.8 4.3 65 814-907 321-387 (538)
420 KOG0983 Mitogen-activated prot 82.8 2.9 6.3E-05 46.5 6.6 51 764-830 178-228 (391)
421 cd06614 STKc_PAK Catalytic dom 82.7 5.3 0.00012 43.3 8.8 43 672-714 89-135 (286)
422 cd05044 PTKc_c-ros Catalytic d 81.7 2.9 6.3E-05 44.7 6.2 43 672-714 73-125 (269)
423 cd05578 STKc_Yank1 Catalytic d 81.5 4.8 0.0001 42.8 7.8 43 672-714 74-119 (258)
424 cd05043 PTK_Ryk Pseudokinase d 80.9 4.1 9E-05 43.9 7.2 17 813-829 136-152 (280)
425 PLN03224 probable serine/threo 80.8 4.1 8.8E-05 49.4 7.7 18 672-689 259-276 (507)
426 cd05046 PTK_CCK4 Pseudokinase 80.7 5.4 0.00012 42.8 8.0 43 672-714 82-136 (275)
427 COG4101 Predicted mannose-6-ph 80.4 1.7 3.7E-05 42.2 3.4 26 333-358 88-113 (142)
428 KOG0984 Mitogen-activated prot 80.1 2.5 5.4E-05 45.4 4.8 108 687-830 78-185 (282)
429 KOG0658 Glycogen synthase kina 80.1 1.1 2.3E-05 51.3 2.3 20 812-831 143-162 (364)
430 PF13013 F-box-like_2: F-box-l 79.9 2.9 6.2E-05 40.5 4.8 46 16-64 18-63 (109)
431 PF13759 2OG-FeII_Oxy_5: Putat 79.8 6.2 0.00013 37.0 7.0 35 331-365 64-101 (101)
432 KOG0592 3-phosphoinositide-dep 79.6 1.3 2.9E-05 53.0 2.9 18 812-829 192-209 (604)
433 KOG0588 Serine/threonine prote 79.2 7.7 0.00017 47.9 9.0 42 543-584 19-69 (786)
434 KOG2052 Activin A type IB rece 79.0 13 0.00028 44.0 10.4 40 673-712 284-325 (513)
435 KOG0604 MAP kinase-activated p 78.7 4.6 9.9E-05 45.6 6.5 43 672-714 133-180 (400)
436 KOG0664 Nemo-like MAPK-related 78.7 1.3 2.8E-05 49.0 2.3 40 811-883 173-212 (449)
437 PLN03225 Serine/threonine-prot 78.6 1.4 3E-05 54.1 2.8 17 813-829 274-290 (566)
438 TIGR02272 gentisate_1_2 gentis 78.6 5.6 0.00012 45.7 7.4 35 333-367 120-154 (335)
439 cd06631 STKc_YSK4 Catalytic do 77.6 8.5 0.00018 41.0 8.2 43 672-714 76-121 (265)
440 KOG0608 Warts/lats-like serine 77.6 1.6 3.4E-05 53.2 2.7 19 812-830 747-765 (1034)
441 COG0478 RIO-like serine/threon 75.9 3.7 8E-05 45.9 4.8 117 750-908 146-279 (304)
442 cd08227 PK_STRAD_alpha Pseudok 75.7 8.6 0.00019 42.9 7.9 44 672-715 73-121 (327)
443 PLN00212 glutelin; Provisional 75.5 10 0.00023 45.7 8.8 73 259-369 357-429 (493)
444 PF05523 FdtA: WxcM-like, C-te 75.1 9 0.00019 38.1 6.9 71 257-368 40-111 (131)
445 COG4857 Predicted kinase [Gene 74.7 4.2 9.2E-05 45.5 4.8 42 811-886 226-267 (408)
446 cd07833 STKc_CDKL Catalytic do 74.6 7.6 0.00016 41.9 6.9 42 673-714 75-119 (288)
447 COG2112 Predicted Ser/Thr prot 74.6 9.7 0.00021 40.3 7.2 49 547-603 34-86 (201)
448 KOG1152 Signal transduction se 74.1 2.2 4.9E-05 51.5 2.8 34 810-876 686-719 (772)
449 KOG0958 DNA damage-responsive 73.9 1.4 3.1E-05 53.7 1.2 114 250-373 173-299 (690)
450 TIGR01221 rmlC dTDP-4-dehydror 73.9 18 0.00039 37.9 9.1 75 253-359 47-124 (176)
451 PF02041 Auxin_BP: Auxin bindi 73.4 13 0.00028 37.9 7.4 70 253-358 47-116 (167)
452 smart00220 S_TKc Serine/Threon 73.2 11 0.00024 38.7 7.4 43 672-714 61-106 (244)
453 KOG0661 MAPK related serine/th 72.6 3 6.6E-05 49.4 3.3 46 811-889 127-175 (538)
454 PRK13290 ectC L-ectoine syntha 71.5 6 0.00013 39.1 4.7 32 333-364 75-106 (125)
455 COG3281 Ble Uncharacterized pr 70.8 13 0.00029 42.7 7.6 14 816-829 287-300 (438)
456 cd06632 STKc_MEKK1_plant Catal 69.5 29 0.00063 36.5 9.8 42 673-714 77-121 (258)
457 cd05077 PTK_Jak1_rpt1 Pseudoki 69.3 20 0.00043 38.6 8.6 42 672-713 78-123 (262)
458 KOG1151 Tousled-like protein k 69.3 5.2 0.00011 47.0 4.2 19 811-829 587-605 (775)
459 KOG0660 Mitogen-activated prot 68.9 2.7 5.8E-05 48.2 1.8 36 811-879 142-177 (359)
460 cd06645 STKc_MAP4K3 Catalytic 68.3 28 0.00061 37.1 9.5 43 672-714 80-125 (267)
461 KOG0586 Serine/threonine prote 67.9 20 0.00044 43.8 8.8 19 811-829 172-190 (596)
462 KOG0663 Protein kinase PITSLRE 67.5 4.4 9.5E-05 46.3 3.1 52 813-897 196-248 (419)
463 COG1718 RIO1 Serine/threonine 67.4 3.9 8.4E-05 45.2 2.6 59 812-909 185-243 (268)
464 KOG0671 LAMMER dual specificit 66.9 4.5 9.7E-05 46.8 3.0 18 812-829 210-227 (415)
465 PHA03210 serine/threonine kina 66.6 3.3 7.2E-05 49.8 2.1 16 814-829 287-302 (501)
466 KOG0668 Casein kinase II, alph 66.6 7.1 0.00015 42.6 4.2 42 810-883 148-189 (338)
467 cd06606 STKc_MAPKKK Catalytic 66.6 25 0.00054 36.6 8.5 42 672-713 75-119 (260)
468 KOG1236 Predicted unusual prot 65.7 7.1 0.00015 46.0 4.3 18 813-830 364-381 (565)
469 KOG2345 Serine/threonine prote 65.1 5.1 0.00011 44.2 2.9 19 811-829 146-164 (302)
470 cd06651 STKc_MEKK3 Catalytic d 65.0 36 0.00078 36.4 9.5 43 672-714 80-125 (266)
471 cd07829 STKc_CDK_like Catalyti 63.4 22 0.00049 38.0 7.6 42 672-714 72-117 (282)
472 TIGR01479 GMP_PMI mannose-1-ph 63.0 21 0.00046 42.9 7.9 26 333-358 415-440 (468)
473 KOG0600 Cdc2-related protein k 62.9 8.4 0.00018 46.1 4.3 95 811-963 235-331 (560)
474 cd08226 PK_STRAD_beta Pseudoki 62.7 27 0.00059 38.9 8.3 43 672-714 73-120 (328)
475 KOG4341 F-box protein containi 62.0 5.5 0.00012 46.7 2.6 47 23-69 74-120 (483)
476 KOG0603 Ribosomal protein S6 k 61.9 5.3 0.00012 48.8 2.6 15 814-828 435-449 (612)
477 cd06653 STKc_MEKK3_like_1 Cata 61.7 43 0.00092 35.8 9.3 43 672-714 80-125 (264)
478 PRK09943 DNA-binding transcrip 59.7 12 0.00026 38.9 4.5 29 333-361 146-174 (185)
479 KOG0584 Serine/threonine prote 58.7 12 0.00027 45.7 4.9 20 811-830 162-181 (632)
480 cd07831 STKc_MOK Catalytic dom 58.7 40 0.00087 36.1 8.5 43 672-714 74-119 (282)
481 KOG0575 Polo-like serine/threo 58.5 45 0.00097 40.9 9.4 39 546-584 29-75 (592)
482 PF10009 DUF2252: Uncharacteri 57.3 6 0.00013 46.4 1.9 73 810-911 40-122 (385)
483 PRK15457 ethanolamine utilizat 57.1 62 0.0014 35.4 9.3 26 333-358 193-218 (233)
484 KOG4408 Putative Mg2+ and Co2+ 57.0 2.3 4.9E-05 48.2 -1.5 49 21-69 8-56 (386)
485 PF01050 MannoseP_isomer: Mann 57.0 12 0.00026 38.2 3.8 26 333-358 102-127 (151)
486 KOG0666 Cyclin C-dependent kin 56.4 8.1 0.00018 43.9 2.6 19 812-830 150-168 (438)
487 cd05076 PTK_Tyk2_rpt1 Pseudoki 56.3 17 0.00037 39.4 5.2 43 672-714 90-136 (274)
488 KOG1035 eIF-2alpha kinase GCN2 55.4 7.1 0.00015 51.1 2.2 19 812-830 715-733 (1351)
489 COG1898 RfbC dTDP-4-dehydrorha 55.4 73 0.0016 33.4 9.2 79 252-362 47-127 (173)
490 KOG1006 Mitogen-activated prot 54.3 14 0.0003 41.3 3.9 43 775-830 162-204 (361)
491 KOG0659 Cdk activating kinase 53.3 8.9 0.00019 42.7 2.3 19 811-829 118-136 (318)
492 PF00908 dTDP_sugar_isom: dTDP 52.8 32 0.00069 36.1 6.2 80 253-364 46-129 (176)
493 TIGR03214 ura-cupin putative a 52.8 14 0.00031 40.9 3.9 26 333-358 218-243 (260)
494 KOG0194 Protein tyrosine kinas 51.3 25 0.00054 42.4 5.7 36 814-883 282-317 (474)
495 PF07714 Pkinase_Tyr: Protein 51.0 37 0.00079 36.5 6.7 41 673-713 76-121 (259)
496 KOG0598 Ribosomal protein S6 k 50.1 9.2 0.0002 44.0 1.8 19 812-830 143-161 (357)
497 KOG0579 Ste20-like serine/thre 50.0 15 0.00033 45.2 3.6 19 812-830 148-166 (1187)
498 KOG2268 Serine/threonine prote 49.9 64 0.0014 37.5 8.3 113 750-908 147-279 (465)
499 KOG0599 Phosphorylase kinase g 48.3 8.7 0.00019 42.9 1.3 18 812-829 141-158 (411)
500 PF05899 Cupin_3: Protein of u 47.7 11 0.00024 33.5 1.7 17 333-349 44-60 (74)
No 1
>KOG2130 consensus Phosphatidylserine-specific receptor PtdSerR, contains JmjC domain [Chromatin structure and dynamics; Signal transduction mechanisms]
Probab=100.00 E-value=1.2e-73 Score=602.80 Aligned_cols=395 Identities=44% Similarity=0.778 Sum_probs=354.4
Q ss_pred HhHHHHHHccCchhHHHHHHhhcCCceeecCccceeecccCCCCCccccccccccccCCCCcccccccccccccccCCCc
Q 002043 47 VSSVMYIFCNEEPLWMSLCLKKASGVLQYKGSWKKTALHLEDPPIEYDESCTRLLHFDGFYSPFLYRRYYRCHTVLDGFS 126 (976)
Q Consensus 47 vsr~fy~~~~~d~LWr~~~~~~~~~~~~~~gSWr~tyl~~~~~~~~~~~~~~~~~~~~gfySd~LYrp~~~~~~~l~~~~ 126 (976)
||..+|.+|+++.+||.+|++...+++.+. +||.+|.+|++|...+.+++
T Consensus 1 vs~~~y~~~n~~~~kr~~~~kr~arpel~~------------------------------~~~w~~~~y~e~f~~~~~~~ 50 (407)
T KOG2130|consen 1 VSSSMYILCNHEPLKRSLELKRKARPELYK------------------------------MSDWLYKRYYESFTLLDPFF 50 (407)
T ss_pred CccceeeecCcchHHHHHHHHHhcChhhhh------------------------------hhhHHHHHHHHhccccCccc
Confidence 467899999999999999999877665322 58999999999999999999
Q ss_pred cCCCCccccCCCCHHHHHHHh--ccCCccccccccCCcCCCCCCHHHHHHHhCCeeEEEEecC-CceEEeeHHHHHHHHh
Q 002043 127 FDSQLVKRKKIVTREEFDREC--AEEPILLSGLADTWPARNTWTIDQLLTRYGDTAFRISQRS-VRSISMKFKDYVAYMN 203 (976)
Q Consensus 127 ~~~~~IeRv~~lS~eeF~~~Y--~~kPVII~g~~~~WpA~~~Wt~eyL~e~~Gd~~V~V~~~s-~~~~~m~l~dfl~~~~ 203 (976)
++..+++|..+||.+||.++| +++||||+|+..+|||..+||+++|.++|++++|.+.+.+ +..++|+|+.|++||+
T Consensus 51 ~dn~~r~~~~~isveeF~~~ferp~kPVll~g~~DgW~A~ekWT~drLskkyrnq~Fkcged~~gnsv~MKmkyY~~Ym~ 130 (407)
T KOG2130|consen 51 FDNGNRERRRNISVEEFIERFERPYKPVLLSGLTDGWPASEKWTLDRLSKKYRNQKFKCGEDNNGNSVKMKMKYYIEYMK 130 (407)
T ss_pred cccchhhhhcCCCHHHHHHHhcccCCceEeeccccCCchhhhhhHHHHHHHhcCccccccccCCCcceeeeHHHHHHHHh
Confidence 999999999999999999999 8899999999999999999999999999999999998865 7889999999999999
Q ss_pred hcCCCCCeeEeccccccchh--hhhhccCCCCccccchhcccCCCCCCCcceEEeecCCCCCcccccCCCCcccEEEEEE
Q 002043 204 VQHDEDPLYIFDYKFGENAQ--GLLEDYRVPDLFQEDLFNVLDGDMRPSYRWVIIGPQRSGASWHVDPALTSAWNTLLCG 281 (976)
Q Consensus 204 ~~~d~~plYL~d~~f~e~~P--~L~~Dy~vP~~f~eDlf~~l~~~~rp~~rwL~iGp~gSgT~lH~Dp~~t~awn~qI~G 281 (976)
.+.|+.|+|+||..|+++.| .|.+||.||.||.+|+|++++++.||+|||++|||++|||.+|+||.+|+|||++|+|
T Consensus 131 ~~RddsPLYiFDssFgE~~~~rkLl~dY~VPk~F~dDlF~y~g~e~RPpyRWfvmGParSGtsiHIDPlgTSAWNtll~G 210 (407)
T KOG2130|consen 131 STRDDSPLYIFDSSFGEHAPRRKLLEDYSVPKYFRDDLFQYLGEERRPPYRWFVMGPARSGTSIHIDPLGTSAWNTLLQG 210 (407)
T ss_pred ccccCCCeEEecchhhcccchhhhhhhcCcchhhhHHHHHhcCcccCCCceeEEecCCCCCceeEECCcchHHHHHHhhc
Confidence 99999999999999999999 8999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEEEEeCCCCCCCcceeeecCCCCCccccCCcch-hhhhhh-----CCCCCCCCCCEEEEEcCCCEEEeCCCCceeeEe
Q 002043 282 RKRWALYPPGRVPLGVTVHVNEDDGDVNIETPSSL-EWWLDF-----YPLLADDDKPIECTQLPGETIVVPSGWWHCILN 355 (976)
Q Consensus 282 rKrW~LfPP~~~p~~v~~~~~~~~s~vd~~~Pdsl-~W~l~~-----yP~l~~~~~~~e~vL~PGDvLfVP~GWWH~V~N 355 (976)
+|||.||||+..|.++.++.+.. + ..|+++ .||... +|.+....+|+||+|.|||+||||.||||.|+|
T Consensus 211 hKrW~LfPp~~p~~lvkv~~~e~-g----~~~de~itwf~~~y~rt~~Pswp~E~kPIEc~q~pGEt~fVP~GWWHvVlN 285 (407)
T KOG2130|consen 211 HKRWVLFPPGTPPELVKVTVDEG-G----KQPDEIITWFSTIYPRTQLPSWPDEYKPIECLQKPGETMFVPSGWWHVVLN 285 (407)
T ss_pred cceeEEcCCCCCCCceeeccccc-C----CCCcceechhhhccccccCCCCccccCCceeeecCCceEEecCCeEEEEec
Confidence 99999999999999987665432 2 345543 676554 455555578999999999999999999999999
Q ss_pred cCCcEEEeecccCCCCHHHHHHHhhccCCccchhhhcchhchhhhhccccccccC-CCCCCCcchhhHHHHHhhhccccc
Q 002043 356 LETTIAVTQNFVDSKNFEFVCLDFAPGYRHKGVCRAGLLALEEESLEGGGKNTSA-GDHDMSYPDLTRKEKRVRVNRCGE 434 (976)
Q Consensus 356 Ld~SISVt~NFv~~~nl~~vl~dl~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~r~~~~~~~~ 434 (976)
+++||||||||++..|+..||.++++|+.+..++++.+++++..+..++...... ...++++.+.++++++-+.+....
T Consensus 286 le~TIAiTqNf~s~eNf~~Vw~ktv~Grpkls~~w~~~L~~~~pel~~l~~s~~~~e~~~~~~~sss~ssssssss~~~s 365 (407)
T KOG2130|consen 286 LEPTIAITQNFASKENFPFVWHKTVRGRPKLSRKWARLLALQRPELADLADSTHLEESTGLASDSSSDSSSSSSSSSSSS 365 (407)
T ss_pred cCceeeeeeccccccCCceeeecccCCCcchhhHHHHHHhhcChhHHHHhhhhccccccCcccccccccccccccCCCCC
Confidence 9999999999999999999999999999999999999999999999998877655 556799999999999988776666
Q ss_pred cccccccccccccccccCCCccccchHHHHhhhhccCCCCcccCCCCCccchhhHH
Q 002043 435 IQNHEEDTNGVSKNYNSSKQDFSYDINFLAKFLDEDRDHYNFPWSSGNCTGKREMR 490 (976)
Q Consensus 435 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 490 (976)
+.+ |...++. +.+|.|+++++ ++.++ +++|+++|++|||+|+
T Consensus 366 ~e~-e~d~~G~-------~gg~~~~~d~r---m~~~~---s~p~~m~~s~gq~~~~ 407 (407)
T KOG2130|consen 366 DEE-ESDDNGD-------NGGFKRKKDRR---MDGNG---SFPSSMGNSVGQRSMR 407 (407)
T ss_pred ccc-cccccCc-------ccccccchhhh---hhcCC---CCccccccccccccCC
Confidence 655 5555555 34999999998 66776 7899999999999875
No 2
>PF13621 Cupin_8: Cupin-like domain; PDB: 3AL6_C 3AL5_C 2XUM_A 2Y0I_A 1MZE_A 3KCY_A 1MZF_A 1YCI_A 2ILM_A 1H2L_A ....
Probab=100.00 E-value=1.7e-36 Score=323.60 Aligned_cols=216 Identities=30% Similarity=0.579 Sum_probs=162.6
Q ss_pred HHHHHHHh--ccCCccccccccCCcCCCCCC-----HHHHHHHhCCeeEEEEecC-----------------CceEEeeH
Q 002043 140 REEFDREC--AEEPILLSGLADTWPARNTWT-----IDQLLTRYGDTAFRISQRS-----------------VRSISMKF 195 (976)
Q Consensus 140 ~eeF~~~Y--~~kPVII~g~~~~WpA~~~Wt-----~eyL~e~~Gd~~V~V~~~s-----------------~~~~~m~l 195 (976)
|++|.++| +++||||+|++.+|+|+++|+ ++||.+++|+..|.+.... .....|+|
T Consensus 1 p~eF~~~~~~~~~PvVi~g~~~~w~a~~~W~~~~~~~~~l~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (251)
T PF13621_consen 1 PEEFFERYVKPNKPVVIRGAAADWPAFQKWTDDEYLLDYLKEKYGDVPVPVRDSPNGISDSFGYNDDRKFVNFERERMPF 80 (251)
T ss_dssp -HHHHHHTCCTT--EEEESSSTTCCHHHH-S-----HHHHHHHHTSSEEEEEEEST--SSBTS-B-GCCCTCEEEEEEEH
T ss_pred CHHHHHHHhCCCCCEEEeCCccCCchhhhccchhHHHHHHHHHcCCeEEEEEecCCcccccccccccccccCCeeEECcH
Confidence 68999999 999999999999999999999 5999999999999986421 13679999
Q ss_pred HHHHHHHhhcC---CCCCeeEeccccccchhhhhhccCCCCccccchhcccCCCCCCCcceEEeecCCCCCcccccCCCC
Q 002043 196 KDYVAYMNVQH---DEDPLYIFDYKFGENAQGLLEDYRVPDLFQEDLFNVLDGDMRPSYRWVIIGPQRSGASWHVDPALT 272 (976)
Q Consensus 196 ~dfl~~~~~~~---d~~plYL~d~~f~e~~P~L~~Dy~vP~~f~eDlf~~l~~~~rp~~rwL~iGp~gSgT~lH~Dp~~t 272 (976)
++|++++.... ....+|+.+..+.+.+|.|.++..+| +..+++. . .+...+||||++|++|++|+|+.
T Consensus 81 ~~f~~~~~~~~~~~~~~~~y~~~~~~~~~~~~l~~~~~~~--~~~~~~~---~--~~~~~~l~ig~~gs~t~lH~D~~-- 151 (251)
T PF13621_consen 81 RDFLDRLRANRDQRDKPYYYLQNWNLFEDFPELREDNDLP--FPPELFG---K--EPQSSNLWIGPPGSFTPLHYDPS-- 151 (251)
T ss_dssp HHHHHHHHHSCHSTSSSEEEEEEETHHHHSHHHHCCS-CH--HHHCHSC---C--HCCEEEEEEE-TTEEEEEEE-SS--
T ss_pred HHHHHHHHhcccccCCceEEEecCchHHHhhhhhhccccc--cchhhcc---c--CccccEEEEeCCCceeeeeECch--
Confidence 99999988764 23568998888888899998885544 3333332 1 13346899999999999999994
Q ss_pred cccEEEEEEEEEEEEeCCCCCCCcceeeec---CCCCCccccCCcchhhhhhhCCCCCCCCCCEEEEEcCCCEEEeCCCC
Q 002043 273 SAWNTLLCGRKRWALYPPGRVPLGVTVHVN---EDDGDVNIETPSSLEWWLDFYPLLADDDKPIECTQLPGETIVVPSGW 349 (976)
Q Consensus 273 ~awn~qI~GrKrW~LfPP~~~p~~v~~~~~---~~~s~vd~~~Pdsl~W~l~~yP~l~~~~~~~e~vL~PGDvLfVP~GW 349 (976)
++|++||+|+|+|+||||.+.+.++..... ...+.+|+.+|+ .++||.++++ ++++|+|+|||+||||+||
T Consensus 152 ~n~~~~i~G~K~~~L~pP~~~~~l~~~~~~~~~~~~~~~d~~~~d-----~~~~p~~~~~-~~~~~~l~pGD~LfiP~gW 225 (251)
T PF13621_consen 152 HNLLAQIRGRKRWILFPPDDSPNLYPRPDSHGGTVFSWVDPDNPD-----LERFPKFRKA-PPYEVVLEPGDVLFIPPGW 225 (251)
T ss_dssp EEEEEEEESEEEEEEE-GGGGGGCTBETTTST-TCBBSS-TTS-------TTT-CGGGG---EEEEEEETT-EEEE-TT-
T ss_pred hhhhhccCCCEEEEEECCccccccccceecccccceeeeeccChh-----hhhhhhhccC-ceeEEEECCCeEEEECCCC
Confidence 789999999999999999988766544211 123456777777 6899999886 8999999999999999999
Q ss_pred ceeeEec--CC-cEEEeecccCCC
Q 002043 350 WHCILNL--ET-TIAVTQNFVDSK 370 (976)
Q Consensus 350 WH~V~NL--d~-SISVt~NFv~~~ 370 (976)
||+|+|+ ++ |||||+||..+.
T Consensus 226 wH~V~~~~~~~~sisvn~w~~~~~ 249 (251)
T PF13621_consen 226 WHQVENLSDDDLSISVNYWFRTPF 249 (251)
T ss_dssp EEEEEESTTSSCEEEEEEEEESS-
T ss_pred eEEEEEcCCCCeEEEEEEEecccc
Confidence 9999999 76 999999998753
No 3
>KOG2131 consensus Uncharacterized conserved protein, contains JmjC domain [Chromatin structure and dynamics; Signal transduction mechanisms]
Probab=100.00 E-value=6.1e-34 Score=307.67 Aligned_cols=311 Identities=22% Similarity=0.327 Sum_probs=227.6
Q ss_pred CCCccccCC--CCHHHHHHHh--ccCCccccccccCCcCC----CCCC-------H------------------------
Q 002043 129 SQLVKRKKI--VTREEFDREC--AEEPILLSGLADTWPAR----NTWT-------I------------------------ 169 (976)
Q Consensus 129 ~~~IeRv~~--lS~eeF~~~Y--~~kPVII~g~~~~WpA~----~~Wt-------~------------------------ 169 (976)
...|+|+.. ++++.|.+.| .+.||+|.++..+|++. ..|. +
T Consensus 27 r~~v~r~~g~~~d~~~~a~~~~~k~~~v~is~v~~d~~~~~~~~~s~~dl~~~~~l~n~~~~f~k~~v~~~~~~v~~~~~ 106 (427)
T KOG2131|consen 27 RPCVLRLIGPTADYGDFAERDTHKRPGVLISYVLEDWPCVSRDNESGADLNNNPDLKNFARSFAKRIVQNGDKNVFLCDL 106 (427)
T ss_pred hhhhhhhcccccCcccchhhhcccCCCccccccccCcccccCCCcchhhhccCcchhHHHHHHhHHHHhcCCcccccccc
Confidence 355777765 8889999999 78999999999999987 3332 1
Q ss_pred ------HHHHHHhCCeeEEEEecC-CceEEeeHHHHHHH-----HhhcCCCCCeeEeccccccchhhhhhccCCCCcccc
Q 002043 170 ------DQLLTRYGDTAFRISQRS-VRSISMKFKDYVAY-----MNVQHDEDPLYIFDYKFGENAQGLLEDYRVPDLFQE 237 (976)
Q Consensus 170 ------eyL~e~~Gd~~V~V~~~s-~~~~~m~l~dfl~~-----~~~~~d~~plYL~d~~f~e~~P~L~~Dy~vP~~f~e 237 (976)
++|.+.||+..+++..+. .+...|+++++.-+ +... ...++|+.|+|+...+|. ..-|..|++|+.
T Consensus 107 s~f~~~~~Le~ny~d~~v~~a~~~e~e~~~l~lad~~~~e~~~~~~~~-q~p~ly~kDwHL~~~~d~-~~~~~~pd~F~~ 184 (427)
T KOG2131|consen 107 SLFPDYEYLERNYGDFVVPVANCNEKERYSLKLADWEFREEQVQLACP-QAPSLYGKDWHLYRFLDN-DFPYWTPDLFAK 184 (427)
T ss_pred ccCccHHHHHhhhhhcchhhccccchhhhhhhhccchhHHHhHhhhcC-CCccccccchheeeecCc-ccccccchhhhh
Confidence 234444444444443321 11222333332222 1111 234789999987777763 455788999999
Q ss_pred chhccc-CCCCCCCcceEEeecCCCCCcccccCCCCcccEEEEEEEEEEEEeCCCCCCCcceeeecCCCCCcc--ccCCc
Q 002043 238 DLFNVL-DGDMRPSYRWVIIGPQRSGASWHVDPALTSAWNTLLCGRKRWALYPPGRVPLGVTVHVNEDDGDVN--IETPS 314 (976)
Q Consensus 238 Dlf~~l-~~~~rp~~rwL~iGp~gSgT~lH~Dp~~t~awn~qI~GrKrW~LfPP~~~p~~v~~~~~~~~s~vd--~~~Pd 314 (976)
|+++.. -....++||++++||+||+||+|.|.+.+++|.+.|+|+|+|.|+||++..... +..++.. +..+.
T Consensus 185 dwlne~~i~~~~ddyrFvy~Gp~gSwtp~HaDVf~s~swS~nicG~KrWl~~pP~qe~~l~-----dr~gnlp~~~~~~~ 259 (427)
T KOG2131|consen 185 DWLNEFVIDGESDDYRFVYAGPAGSWTPFHADVFHSPSWSVNICGRKRWLLYPPEQEQTLA-----DRYGNLPLPSWITK 259 (427)
T ss_pred cccchhhccCCCCceeEEEeccCCCCCccchhhhcCCcceeeeecceeEEEeChHHhhhhh-----hhccCcCCcccccc
Confidence 988632 223467899999999999999999999999999999999999999999864432 1222221 11111
Q ss_pred chhhhhhhCCCCCCCCCCEEEEEcCCCEEEeCCCCceeeEecCCcEEEeecccCCCCHHHHHHHhhccCCccchhhhcch
Q 002043 315 SLEWWLDFYPLLADDDKPIECTQLPGETIVVPSGWWHCILNLETTIAVTQNFVDSKNFEFVCLDFAPGYRHKGVCRAGLL 394 (976)
Q Consensus 315 sl~W~l~~yP~l~~~~~~~e~vL~PGDvLfVP~GWWH~V~NLd~SISVt~NFv~~~nl~~vl~dl~~~~~~~~~~r~~~~ 394 (976)
++ .++ .+.++++|+|||++|||+||.|||.||++|||||+||++.+|+..++..|...| ++++.+...
T Consensus 260 -----ld---~~~--~~~lei~Qepge~VFvPsGW~hQV~NL~dTISINHNW~N~~nl~~~w~~Lk~~y--~a~~esisd 327 (427)
T KOG2131|consen 260 -----LD---LFR--GPLLEIFQEPGETVFVPSGWHHQVLNLGDTISINHNWCNATNLAWMWDALKEDY--PALAESISD 327 (427)
T ss_pred -----cc---ccc--cchhhhhccCCceeeccCccccccccccceeeecccccccccHHHHHHHHHhhh--hhhhhhhhh
Confidence 11 111 367999999999999999999999999999999999999999999998887766 456666666
Q ss_pred hchhhhhccccccccCCCCCCCcchhhHHHHHhhhccccccccccccccccccccccCCCccccchHHH
Q 002043 395 ALEEESLEGGGKNTSAGDHDMSYPDLTRKEKRVRVNRCGEIQNHEEDTNGVSKNYNSSKQDFSYDINFL 463 (976)
Q Consensus 395 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 463 (976)
..+++++.+||-++.+.+++|+.++..=.++...- .-.+.+.+.++|.++-|++.+.++++.+.
T Consensus 328 -d~md~~~~~cq~~lra~~gin~~ef~~f~~~~a~l----~h~~~~~~a~l~~s~~~~~~~~q~evl~~ 391 (427)
T KOG2131|consen 328 -DLMDDFPLECQFSLRATEGINANEFIYFPDFWAML----KHATLNRDASLFISTFLSDWPIQPEVLPP 391 (427)
T ss_pred -hccccchhhhhhhhhhhccccccceEeehHHHHHH----HHHHhccchhhhHHhhhcccccchhhhcc
Confidence 88999999999999999999999987744444210 11355677889999999999999997664
No 4
>KOG2132 consensus Uncharacterized conserved protein, contains JmjC domain [Chromatin structure and dynamics; Signal transduction mechanisms]
Probab=99.93 E-value=6.4e-27 Score=251.70 Aligned_cols=220 Identities=23% Similarity=0.392 Sum_probs=184.9
Q ss_pred CCccccCCCCHHHHHHHh--ccCCccccccccCCcCCCCCCHHHHHHHhCCeeEEEEecCC------ceEEeeHHHHHHH
Q 002043 130 QLVKRKKIVTREEFDREC--AEEPILLSGLADTWPARNTWTIDQLLTRYGDTAFRISQRSV------RSISMKFKDYVAY 201 (976)
Q Consensus 130 ~~IeRv~~lS~eeF~~~Y--~~kPVII~g~~~~WpA~~~Wt~eyL~e~~Gd~~V~V~~~s~------~~~~m~l~dfl~~ 201 (976)
..++..+.++.++|+..+ +++|+|++|...+|||.++|.++||.+..|.+.|+|+..+. ...-|++.+|+.+
T Consensus 127 ~~~~~~~~~~l~~~l~d~~~~~~p~~~l~~~~hwpa~~kw~l~~l~~va~~rTvpvEvg~~y~~~~w~q~l~t~~~g~~R 206 (355)
T KOG2132|consen 127 IDVPGEDRLSLQEFLNDTVGRGTPVILLGFNWHWPAIQKWSLGYLQQVAGNRTVPVEVGSTYADEDWSQNLMTQIKGIKR 206 (355)
T ss_pred hhhccccchHHHHHHHHhhcCCCceEEecccccchHhhhcchhHHHhcccceeeeeecccccchhHHHhhhHHHhhhhhh
Confidence 345556779999999998 99999999999999999999999999999999999976532 3557788888887
Q ss_pred HhhcCCCCCeeEeccccccchhhhhhccCCCCccccchhcccCCCCCCCcceEEeecCCCCCcccccCCCCcccEEEEEE
Q 002043 202 MNVQHDEDPLYIFDYKFGENAQGLLEDYRVPDLFQEDLFNVLDGDMRPSYRWVIIGPQRSGASWHVDPALTSAWNTLLCG 281 (976)
Q Consensus 202 ~~~~~d~~plYL~d~~f~e~~P~L~~Dy~vP~~f~eDlf~~l~~~~rp~~rwL~iGp~gSgT~lH~Dp~~t~awn~qI~G 281 (976)
+......+++|+.+.++..+.|++..|+..|++.....|+ .+..-+..|+||+|+++++|.|+. ||+.+||.|
T Consensus 207 ~~~~~p~~~~YlAqh~lfdqi~elk~Di~iPDyc~~~~f~-----~~~v~~~~w~GpaGtV~pih~dp~--hNi~~qv~G 279 (355)
T KOG2132|consen 207 CILFEPRECLYLAQHHLFDQIPELKFDISIPDYCSFPNFE-----NEVVDINAWIGPAGTVLPIHMDPW--HNILSQVFG 279 (355)
T ss_pred hhcCCccccchhhhhhhhccchhhhhccCCCceeecCCCC-----ccccceeEEeccCCceeccccccc--cceeeeeec
Confidence 6554445788999999999999999999999986532221 112235788999999999999999 679999999
Q ss_pred EEEEEEeCCCCCCCcceeee-cCCCCCccccCCcchhhhhhhCCCCCCCCCCEEEEEcCCCEEEeCCCCceeeEecCCcE
Q 002043 282 RKRWALYPPGRVPLGVTVHV-NEDDGDVNIETPSSLEWWLDFYPLLADDDKPIECTQLPGETIVVPSGWWHCILNLETTI 360 (976)
Q Consensus 282 rKrW~LfPP~~~p~~v~~~~-~~~~s~vd~~~Pdsl~W~l~~yP~l~~~~~~~e~vL~PGDvLfVP~GWWH~V~NLd~SI 360 (976)
+|+|+|+||..++..++... -.+.|.||+++|| ++.||+++++ +.++|+++|||+||||.-|||.|+++++++
T Consensus 280 ~k~i~l~~p~~s~~lyP~d~~~~~tsqvdvenPd-----lk~fp~~~k~-~~l~~lL~pGe~L~iP~kwwhyvrs~d~s~ 353 (355)
T KOG2132|consen 280 RKRIRLYPPEDSGALYPTDTYLLETSQVDVENPD-----LKAFPKFAKA-RFLDCLLEPGEALFIPPKWWHYVRSLDKSF 353 (355)
T ss_pred ceEEEEecCcccCCCCCccchhhcccccccCCCC-----hhhhhHHHHH-HHHHHhcCCchhccccHHHhhhhhhccccc
Confidence 99999999999877776431 1247899999999 8999999886 889999999999999999999999999987
Q ss_pred EE
Q 002043 361 AV 362 (976)
Q Consensus 361 SV 362 (976)
|+
T Consensus 354 s~ 355 (355)
T KOG2132|consen 354 SV 355 (355)
T ss_pred cC
Confidence 64
No 5
>cd05155 APH_ChoK_like_1 Uncharacterized bacterial proteins with similarity to Aminoglycoside 3'-phosphotransferase (APH) and Choline kinase (ChoK) family members. The APH/ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates, such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides, and macrolides leads to their inactivation and to bacterial antibiotic resista
Probab=99.87 E-value=3.1e-21 Score=206.16 Aligned_cols=221 Identities=19% Similarity=0.240 Sum_probs=145.9
Q ss_pred cccccCCCCcceEEec-ceEEEEeecCCcccccccchhHHHHHHHHHhhCCCCCcccccceeccceeecCCcceeccCCC
Q 002043 540 EKLPVGNGSNPVYLMA-DCVVKIFVEGGFESSIYGLGTELEFYSLLAKVNSPLKNYIPDVLASGILYVENGSYTIVPWDG 618 (976)
Q Consensus 540 ~~~~~~~gs~pv~~v~-~~v~K~~~~~~~~~s~~~~~~e~~~y~~l~~~~~~l~~~~P~~~~~g~~~~~~~~~~~~~~~~ 618 (976)
+++..|+.+|.||.++ ++|||++..... ...+..|.++...|.+. +.+++|++++.|...
T Consensus 3 ~~~~~gG~~n~vy~~~~~~VlR~~~~~~~---~~~~~~E~~~l~~L~~~---~~v~vP~~~~~~~~~------------- 63 (235)
T cd05155 3 EPVDSGGTDNATFRLGDDMSVRLPSAAGY---AGQVRKEQRWLPRLAPH---LPLPVPEPLGKGEPG------------- 63 (235)
T ss_pred eeccCCCcccceEEcCCceEEEcCCccch---HHHHHHHHHHHHHHhcc---CCCCCCceeecCCCc-------------
Confidence 5677677799999999 699999886432 23477899988777532 568999999876432
Q ss_pred CCcccccccccccccccccCCCccccccccccccccccccccccCCCCCCCCCccEEEEecccCccchhhhhcCCHHHHH
Q 002043 619 KGVLDVIGKCNLTLLNCKQEEFPFGIWSKKQFEYRSAWMSVSKLSTSDGCNRIWPYIITKRCKGKMFAQLRDALSGEDVL 698 (976)
Q Consensus 619 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~WpYiVm~rl~G~~l~~v~~~Ls~ed~~ 698 (976)
+..+++|+||+|++|+++.+. ...+..
T Consensus 64 -------------------------------------------------~~~~~~~~l~~~i~G~~l~~~----~~~~~~ 90 (235)
T cd05155 64 -------------------------------------------------EGYPWPWSVYRWLEGETATAA----ALSDPS 90 (235)
T ss_pred -------------------------------------------------cCCCcceEEEEeecCCCCCcc----ccCCHH
Confidence 234578999999999999764 223466
Q ss_pred HHHHHHHHHHHHhhCCCCCCCCCCccccccCCCCCCCCCcccccccCCCCchhHHHHHHHHHHHHHHHHHHhhhcCCCCC
Q 002043 699 NLASFLGEQLRNLHLLPCPPFNESSLSDKLKTEPPFNNGFVEDVVDTSSVPAEWEIFIRTLARKKKNLVNRLTAWGHPIP 778 (976)
Q Consensus 699 ~La~~LG~~L~~LHsip~p~~~~~~~~d~~~~g~~~~~~~~~~~~~~~~~~~~W~~~~~~l~~r~~~~~~~~~~wg~~lp 778 (976)
+++.+||+++++||+++.+..... +.. .++ .......|....+... .... ..++
T Consensus 91 ~l~~~la~~l~~LH~i~~~~~~~~--------~~~---~~~-----~~~~~~~~~~~~~~~~-------~~~~---~~l~ 144 (235)
T cd05155 91 EFAEDLADFLAALRQIDPSGGPPA--------GRH---NFL-----RGGDLAVRDAETREAI-------EALE---GVID 144 (235)
T ss_pred HHHHHHHHHHHHHhCCCcccCCcc--------CCc---ccc-----CCCChhHhhHHHHHHH-------HHcc---cccC
Confidence 899999999999999988754322 000 000 0001233443332111 1110 0122
Q ss_pred HHHHHHH-hhhCChhHHHHhhhhhhccCCccCCCCCeEEecCCCCCCeEEccCCcccCCCCCCCCCCCccCCCCCCCCcc
Q 002043 779 KALIDKV-DEYIPDDFVKLLDIYQDENGLNKVCKPCSWIHSDIMDDNVYMEPCCASSRSNGNAADTGPMVNGSINGYDEF 857 (976)
Q Consensus 779 ~~l~e~l-~~ylp~d~~~ll~~~~~e~~~~~~~~~pv~iHgDl~~~NILv~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~ 857 (976)
...+..+ +..+ . .+...+++++|||||++||||++.
T Consensus 145 ~~~~~~~~~~~~--------~--------~~~~~~~~l~HGD~~~~Nvlv~~~--------------------------- 181 (235)
T cd05155 145 VDAARALWEAAL--------R--------APWWGPPVWFHGDLAPGNLLVQDG--------------------------- 181 (235)
T ss_pred hHHHHHHHHHHh--------c--------ccccCCceEEeCCCCCCcEEEECC---------------------------
Confidence 2111111 1111 1 111368999999999999999641
Q ss_pred CcCccceeeEEEeCCCCCCCCcccchhhhcccccCCChHHHHHHHHhcCCccc
Q 002043 858 GEAKSWHCSHIIDFSNLSIGDPIYDVIPIHLDIFRGDSSLFKQFLESYKLPLV 910 (976)
Q Consensus 858 ~~~~~w~~sGIIDFgd~~iGDP~~Dlv~l~l~~f~gd~~l~~~fl~~Y~~~~~ 910 (976)
+++|||||+++.+|||++||+.++.. + +....+.|++.|+.+-.
T Consensus 182 ------~i~giIDw~~a~~gDp~~Dla~~~~~-~--~~~~~~~~~~~y~~~~~ 225 (235)
T cd05155 182 ------RLSAVIDFGCLGVGDPACDLAIAWTL-L--DEDSRAAFRAALGVDDA 225 (235)
T ss_pred ------CEEEEEeCcccCcCChHHHHHHHHhc-C--CHHHHHHHHHHcCCCHH
Confidence 69999999999999999999988764 2 23445789999997643
No 6
>KOG2508 consensus Predicted phospholipase [Lipid transport and metabolism]
Probab=99.82 E-value=3.5e-20 Score=200.84 Aligned_cols=230 Identities=22% Similarity=0.404 Sum_probs=161.0
Q ss_pred ccccC-CCCHHHHHHHh--ccCCccccccccCCcCCCCCCH-HHHHHHhCCeeEEEEec-----CC------------ce
Q 002043 132 VKRKK-IVTREEFDREC--AEEPILLSGLADTWPARNTWTI-DQLLTRYGDTAFRISQR-----SV------------RS 190 (976)
Q Consensus 132 IeRv~-~lS~eeF~~~Y--~~kPVII~g~~~~WpA~~~Wt~-eyL~e~~Gd~~V~V~~~-----s~------------~~ 190 (976)
|.+.+ ..|+-+|+++| +++||||+.+..+|||.++|+. +||.+..||..|.|... .+ ..
T Consensus 24 v~~lD~~Ptpl~Fyr~fvs~n~PvIIrkAL~hWpal~lWs~p~Yl~~algd~vvsvaitPngyadgav~~g~e~f~~pae 103 (437)
T KOG2508|consen 24 VNLLDLTPTPLDFYRKFVSTNTPVIIRKALPHWPALKLWSQPDYLLSALGDIVVSVAITPNGYADGAVMSGNEMFIKPAE 103 (437)
T ss_pred cccccCCCchHHHHHhhhcCCCcEEEecccccCchhhccCchHHHHHhccCeEEEEEeCCCCccccccccCcceeechhh
Confidence 44555 47899999999 9999999999999999999995 59999999998888642 10 12
Q ss_pred EEeeHHHHHHHHhhcCC-CCCeeEecc--ccccchhhhhhccCCCCc-cccchhcccCCCCCCCcceEEeecCCCCCccc
Q 002043 191 ISMKFKDYVAYMNVQHD-EDPLYIFDY--KFGENAQGLLEDYRVPDL-FQEDLFNVLDGDMRPSYRWVIIGPQRSGASWH 266 (976)
Q Consensus 191 ~~m~l~dfl~~~~~~~d-~~plYL~d~--~f~e~~P~L~~Dy~vP~~-f~eDlf~~l~~~~rp~~rwL~iGp~gSgT~lH 266 (976)
++|++++-+..+.+... ...+|+.+. ++....|.+..|..+-++ |+...| + ..|+.-+||||...++|++|
T Consensus 104 ~KlklsevL~vl~~~~~~~~Vly~qkQ~snl~~elp~la~Dl~~~d~~wa~eaf---g--k~PdavNlWiG~~~avTSlH 178 (437)
T KOG2508|consen 104 QKLKLSEVLYVLTQYDESNEVLYGQKQNSNLVKELPPLATDLLLTDFSWAPEAF---G--KVPDAVNLWIGKSEAVTSLH 178 (437)
T ss_pred hhccchhhheehhcccCCCceeehhhhcccccccccccccccccccccccHHHh---C--CChhheeeeecccccccccc
Confidence 35566665555543321 256788653 355556666655554222 222222 2 45777899999999999999
Q ss_pred ccCCCCcccEEEEEEEEEEEEeCCCCCCC--------cceeeecCCCCCcccc----CCcch--hhh-------------
Q 002043 267 VDPALTSAWNTLLCGRKRWALYPPGRVPL--------GVTVHVNEDDGDVNIE----TPSSL--EWW------------- 319 (976)
Q Consensus 267 ~Dp~~t~awn~qI~GrKrW~LfPP~~~p~--------~v~~~~~~~~s~vd~~----~Pdsl--~W~------------- 319 (976)
+|+++| .+|+|.|.|+|+|.||++.+. +.+.. ..+.+...++ .+..+ .|+
T Consensus 179 kDhyEN--lYaViSGeKhFvlipP~d~~~lp~eiyp~g~ysy-~~e~g~fk~e~~dEe~~~~a~~~~svd~~~s~~~~a~ 255 (437)
T KOG2508|consen 179 KDHYEN--LYAVISGEKHFVLIPPDDANQLPLEIYPNGLYSY-EGEDGPFKSEGLDEEDAAIAKTWFSVDPIGSPKELAV 255 (437)
T ss_pred cccccc--eEEEEeccceEEEeCcccccccceeecCCcceee-ecCCCceeecccchhhhhhcceeeeecccCCHHHhcc
Confidence 999975 999999999999999998743 22211 1111111111 00001 122
Q ss_pred -hhhCCCCCCCCCCEEEEEcCCCEEEeCCCCceeeEec----CCcEEEeecccCC
Q 002043 320 -LDFYPLLADDDKPIECTQLPGETIVVPSGWWHCILNL----ETTIAVTQNFVDS 369 (976)
Q Consensus 320 -l~~yP~l~~~~~~~e~vL~PGDvLfVP~GWWH~V~NL----d~SISVt~NFv~~ 369 (976)
..++|.+....++..+.+.+|+++|.|..|.|+|-.. +.+|+||.++--.
T Consensus 256 ~~~k~~l~~~~~k~~~~rv~a~~i~~lp~~w~h~~sq~~gd~~~~Iavn~~~d~~ 310 (437)
T KOG2508|consen 256 PQEKIPLLEAEYKPEMDRVLAGQILYLPEDWFHHVSQVGGDPESDIAVNEWYDIE 310 (437)
T ss_pred chhhCccccccccceeeeeeccccccChhhhhhhccccCCCccceeEEeeecccc
Confidence 3577777665688999999999999999999999887 5689999876443
No 7
>cd05150 APH Aminoglycoside 3'-phosphotransferase (APH). The APH subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). APH catalyzes the transfer of the gamma-phosphoryl group from ATP to aminoglycoside antibiotics such as kanamycin, streptomycin, neomycin, and gentamicin, among others. The aminoglycoside antibiotics target the 30S ribosome and promote miscoding, leading to the production of defective proteins which insert into the bacterial membrane, resulting in membrane damage and the ultimate demise of the bacterium. Phosphorylation of the aminoglycoside antibiotics results in their inactivation, leading to bacterial antibiotic resistance. The APH gene is found on transposons and plasmids and is thought to have originated as a self-defense mechanism used by microorganisms that produce the antibio
Probab=99.82 E-value=2.1e-19 Score=192.44 Aligned_cols=218 Identities=21% Similarity=0.223 Sum_probs=138.2
Q ss_pred cccccCCCCcceEEec----ceEEEEeecCCcccccccchhHHHHHHHHHhhCCCCCcccccceeccceeecCCcceecc
Q 002043 540 EKLPVGNGSNPVYLMA----DCVVKIFVEGGFESSIYGLGTELEFYSLLAKVNSPLKNYIPDVLASGILYVENGSYTIVP 615 (976)
Q Consensus 540 ~~~~~~~gs~pv~~v~----~~v~K~~~~~~~~~s~~~~~~e~~~y~~l~~~~~~l~~~~P~~~~~g~~~~~~~~~~~~~ 615 (976)
+++-.|.-+|.||.++ ..|||+.+... ...+..|++....|+.. .++|+|+..+...
T Consensus 4 ~~~~~g~~~~~v~~~~~~~~~~~vk~~~~~~----~~~~~~E~~~l~~l~~~-----~~vP~v~~~~~~~---------- 64 (244)
T cd05150 4 ERVTEGQSGATVYRLDGKNPGLYLKIAPSGP----TYELEREAERLRWLAGK-----LPVPEVIDYGSDD---------- 64 (244)
T ss_pred eecCCCCCcCeEEEEcCCCCcEEEEecCCCc----ccchHHHHHHHHHHHhc-----CCCCeEEEEEecC----------
Confidence 3444344469999998 59999998433 22366899988777532 6799999774221
Q ss_pred CCCCCcccccccccccccccccCCCccccccccccccccccccccccCCCCCCCCCccEEEEecccCccchhhhhcCCHH
Q 002043 616 WDGKGVLDVIGKCNLTLLNCKQEEFPFGIWSKKQFEYRSAWMSVSKLSTSDGCNRIWPYIITKRCKGKMFAQLRDALSGE 695 (976)
Q Consensus 616 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~WpYiVm~rl~G~~l~~v~~~Ls~e 695 (976)
+.+|+||++++|.++.+.+. ..
T Consensus 65 -------------------------------------------------------~~~~lv~e~i~G~~l~~~~~---~~ 86 (244)
T cd05150 65 -------------------------------------------------------GRAWLLTSAVPGVPAAALWE---EL 86 (244)
T ss_pred -------------------------------------------------------CccEEEEEeeCCccHhHhhc---cc
Confidence 25899999999999988764 34
Q ss_pred HHHHHHHHHHHHHHHhhCCCCCCCCCCccccccCCCCCCCCCcccccccCCCCchhHHHHHHHHHHHHHHHHHHhhhcCC
Q 002043 696 DVLNLASFLGEQLRNLHLLPCPPFNESSLSDKLKTEPPFNNGFVEDVVDTSSVPAEWEIFIRTLARKKKNLVNRLTAWGH 775 (976)
Q Consensus 696 d~~~La~~LG~~L~~LHsip~p~~~~~~~~d~~~~g~~~~~~~~~~~~~~~~~~~~W~~~~~~l~~r~~~~~~~~~~wg~ 775 (976)
++..++.++|+++++||++|.+..+.. ..+...+.... ..+......+ .
T Consensus 87 ~~~~~~~~l~~~l~~lH~i~~~~~~~~---------------------------~~~~~~~~~~~---~~~~~~~~~~-~ 135 (244)
T cd05150 87 EPERLVDALAEALRRLHALPVADCPFD---------------------------RRLDRRLAEAR---ARVENGLVDE-D 135 (244)
T ss_pred CHHHHHHHHHHHHHHHhcCCcccCCcc---------------------------hhHHHHHHHHH---HHHhcCCcCh-h
Confidence 567889999999999999986543221 00111111111 1000000000 0
Q ss_pred CCCHHHHHHHhhhCChhHHHHhhhhhhccCCccCCCCCeEEecCCCCCCeEEccCCcccCCCCCCCCCCCccCCCCCCCC
Q 002043 776 PIPKALIDKVDEYIPDDFVKLLDIYQDENGLNKVCKPCSWIHSDIMDDNVYMEPCCASSRSNGNAADTGPMVNGSINGYD 855 (976)
Q Consensus 776 ~lp~~l~e~l~~ylp~d~~~ll~~~~~e~~~~~~~~~pv~iHgDl~~~NILv~~~~~~~~~~~~~~~~~~~~~~~~~~~d 855 (976)
.++... .......+...+.. ..+...+||++|||++++|||+++.
T Consensus 136 ~~~~~~-------~~~~~~~~~~~l~~---~~~~~~~~~l~HgD~~~~Nil~~~~------------------------- 180 (244)
T cd05150 136 DFDDER-------RGWSAEELYAELEA---TRPAEEDLVVTHGDACLPNIIVDPG------------------------- 180 (244)
T ss_pred hCcHhh-------cCCCHHHHHHHHHh---hCCCcCceEEECCCCCCccEEEeCC-------------------------
Confidence 111110 00001111111110 0112367999999999999999752
Q ss_pred ccCcCccceeeEEEeCCCCCCCCcccchhhhcccc--cCCChHHHHHHHHhcCCc
Q 002043 856 EFGEAKSWHCSHIIDFSNLSIGDPIYDVIPIHLDI--FRGDSSLFKQFLESYKLP 908 (976)
Q Consensus 856 g~~~~~~w~~sGIIDFgd~~iGDP~~Dlv~l~l~~--f~gd~~l~~~fl~~Y~~~ 908 (976)
+++|||||+.+.+|||++||+.++... +.+++...++|+++|+.+
T Consensus 181 --------~~~~iIDwe~a~~gdp~~Dla~~~~~~~~~~~~~~~~~~f~~~Y~~~ 227 (244)
T cd05150 181 --------KFSGFIDLGRLGVADRYQDLALAVRSLRENLGGEEYAARFLDRYGID 227 (244)
T ss_pred --------cEEEEEEccccccccHHHHHHHHHHHhhhhcCChHHHHHHHHHcCCC
Confidence 589999999999999999999876543 223577889999999876
No 8
>cd05152 MPH2' Macrolide 2'-Phosphotransferase (MPH2'). MPH2' is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). MPH2' catalyzes the transfer of the gamma-phosphoryl group from ATP to the 2'-hydroxyl of macrolide antibiotics such as erythromycin, clarithromycin, and azithromycin, among others. Macrolides penetrate the bacterial cell and bind to ribosomes, where it interrupts protein elongation, leading ultimately to the demise of the bacterium. Phosphorylation of macrolides leads to their inactivation. Based on substrate specificity and amino acid sequence, MPH2' is divided into types I and II, encoded by mphA and mphB genes, respectively. MPH2'I inactivates 14-membered ring macrolides while MPH2'II inactivates both 14- and 16-membered ring macrolides. Enzymatic inactivation of macrolides has been reported
Probab=99.81 E-value=3.1e-19 Score=196.20 Aligned_cols=231 Identities=16% Similarity=0.197 Sum_probs=151.0
Q ss_pred HHHhhCCCCCCccccccccCCC-CcceEEe----c-ceEEEEeecCCcccccccchhHHHHHHHHHhhCCCCCcccccce
Q 002043 526 EICNFHKLPTLTAEEKLPVGNG-SNPVYLM----A-DCVVKIFVEGGFESSIYGLGTELEFYSLLAKVNSPLKNYIPDVL 599 (976)
Q Consensus 526 ~~~~~~~l~~~~~~~~~~~~~g-s~pv~~v----~-~~v~K~~~~~~~~~s~~~~~~e~~~y~~l~~~~~~l~~~~P~~~ 599 (976)
++++.+||....+.-+.- ++| +|-||+| | .+|||+.+.+.... .+..|.+..+.|+ ..++.++|+++
T Consensus 2 ~~~~~~~~~~~~~~~~~~-~~g~~~~v~~i~~~~g~~~VlR~p~~~~~~~---~l~rE~~vL~~L~---~~l~vpvP~~~ 74 (276)
T cd05152 2 ELARKHGLTLKPETLSLN-ESGLDFQVVFAKDTDGVPWVLRIPRRPDVSE---RAAAEKRVLALVR---KHLPVQVPDWR 74 (276)
T ss_pred chhhhcCCccCCCcceec-CCcceeEEEEEEcCCCCeEEEEecCCHHHHH---HHHHHHHHHHHHH---hcCCCCCCcee
Confidence 467889999854322222 444 6778887 3 69999998543322 3678998777775 34778899876
Q ss_pred eccceeecCCcceeccCCCCCcccccccccccccccccCCCccccccccccccccccccccccCCCCCCCCCccEEEEec
Q 002043 600 ASGILYVENGSYTIVPWDGKGVLDVIGKCNLTLLNCKQEEFPFGIWSKKQFEYRSAWMSVSKLSTSDGCNRIWPYIITKR 679 (976)
Q Consensus 600 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~WpYiVm~r 679 (976)
..+ ..+++|++
T Consensus 75 ~~~---------------------------------------------------------------------~~~~~y~~ 85 (276)
T cd05152 75 VHT---------------------------------------------------------------------PELIAYPK 85 (276)
T ss_pred eec---------------------------------------------------------------------CceEEEec
Confidence 331 24778889
Q ss_pred ccCccchh--------hhhcCCHHHHHHHHHHHHHHHHHhhCCCCCCCCCCccccccCCCCCCCCCcccccccCCCCchh
Q 002043 680 CKGKMFAQ--------LRDALSGEDVLNLASFLGEQLRNLHLLPCPPFNESSLSDKLKTEPPFNNGFVEDVVDTSSVPAE 751 (976)
Q Consensus 680 l~G~~l~~--------v~~~Ls~ed~~~La~~LG~~L~~LHsip~p~~~~~~~~d~~~~g~~~~~~~~~~~~~~~~~~~~ 751 (976)
++|+++.. +|...+..++..++.++|++|++||+++.+..... |.+. .....
T Consensus 86 i~G~p~~~~~~~~~~~~~~~~~~~~~~~la~~la~~La~LH~i~~~~~~~~--------g~~~------------~~~~~ 145 (276)
T cd05152 86 LPGVPAATIDPEIGEYVWNFDHKNPPEVFIESLAKALAELHSIPQDEAEAA--------GIPV------------ETPEE 145 (276)
T ss_pred cCCCcccccCcccccceecccCCCcCHHHHHHHHHHHHHHhCCChhhcccc--------CCCC------------CCHHH
Confidence 99988753 22222235667899999999999999987654432 1110 01112
Q ss_pred HHHHHHHHHHHHHHHHHHhhhcCCCCCHHHHHHHhhhCChhHHHHhhhhhhccCCccCCCCCeEEecCCCCCCeEEccCC
Q 002043 752 WEIFIRTLARKKKNLVNRLTAWGHPIPKALIDKVDEYIPDDFVKLLDIYQDENGLNKVCKPCSWIHSDIMDDNVYMEPCC 831 (976)
Q Consensus 752 W~~~~~~l~~r~~~~~~~~~~wg~~lp~~l~e~l~~ylp~d~~~ll~~~~~e~~~~~~~~~pv~iHgDl~~~NILv~~~~ 831 (976)
....+.... . +...- ..++..+++.+.++++++. . ...+++++|||++++|||+++.
T Consensus 146 ~~~~~~~~l---~----~~~~~-~~~~~~l~~~~~~~L~~~~-----~---------~~~~~~lvHGD~~~~Nilv~~~- 202 (276)
T cd05152 146 VRQTMADRM---D----RVKEE-FGVSEALWNRWQAWLDDDS-----Y---------WPRHTVLVHGDLHPGHILIDED- 202 (276)
T ss_pred HHHHHHHHH---H----HHHHh-cCCCHHHHHHHHHHHhhcC-----C---------CCCCCeeEeCCCCCCcEEEeCC-
Confidence 111111111 1 11110 2456677777766664211 1 1357899999999999999752
Q ss_pred cccCCCCCCCCCCCccCCCCCCCCccCcCccceeeEEEeCCCCCCCCcccchhhhcccccCCChHHHHHHHHhcCCcc
Q 002043 832 ASSRSNGNAADTGPMVNGSINGYDEFGEAKSWHCSHIIDFSNLSIGDPIYDVIPIHLDIFRGDSSLFKQFLESYKLPL 909 (976)
Q Consensus 832 ~~~~~~~~~~~~~~~~~~~~~~~dg~~~~~~w~~sGIIDFgd~~iGDP~~Dlv~l~l~~f~gd~~l~~~fl~~Y~~~~ 909 (976)
| +++||||||++.+|||++||+.++.. .+....++|+++|+...
T Consensus 203 ------------------------~-------~~~gviDWe~a~iGDPa~Dla~~~~~---~~~~~~~~~~~~Y~~~~ 246 (276)
T cd05152 203 ------------------------A-------RVTGLIDWTEAKVGDPARDFVLHYRI---FGEAGLERLIDAYEAAG 246 (276)
T ss_pred ------------------------C-------CEEEEECcHhcccCCHHHHHHHHHHh---cChHHHHHHHHHHHHcC
Confidence 1 79999999999999999999977543 45667899999999643
No 9
>PF01636 APH: Phosphotransferase enzyme family This family is part of the larger protein kinase superfamily.; InterPro: IPR002575 This entry consists of bacterial antibiotic resistance proteins, which confer resistance to various aminoglycosides they include:- aminoglycoside 3'-phosphotransferase or kanamycin kinase / neomycin-kanamycin phosphotransferase and streptomycin 3''-kinase or streptomycin 3''-phosphotransferase. The aminoglycoside phosphotransferases inactivate aminoglycoside antibiotics via phosphorylation []. The proteins are found in a range of taxonomic groups.; PDB: 2PPQ_A 2Q83_B 3TDV_B 3TDW_A 3I0O_A 3I0Q_A 3I1A_B 3Q2M_A 3HAV_C 2PUI_B ....
Probab=99.76 E-value=3e-18 Score=178.75 Aligned_cols=217 Identities=27% Similarity=0.384 Sum_probs=137.6
Q ss_pred ccCCC-CcceEEec----ceEEEEeecCCcccccccchhHHHHHHHHHhhCCCCCcccccceeccceeecCCcceeccCC
Q 002043 543 PVGNG-SNPVYLMA----DCVVKIFVEGGFESSIYGLGTELEFYSLLAKVNSPLKNYIPDVLASGILYVENGSYTIVPWD 617 (976)
Q Consensus 543 ~~~~g-s~pv~~v~----~~v~K~~~~~~~~~s~~~~~~e~~~y~~l~~~~~~l~~~~P~~~~~g~~~~~~~~~~~~~~~ 617 (976)
|+++| +|.||.|. .+|||+++.. .....+..|.++++.|++.+. ++|++++.+...
T Consensus 4 ~l~~G~~n~~~~v~~~~~~~vlK~~~~~---~~~~~~~~e~~~~~~l~~~~~----pvP~~~~~~~~~------------ 64 (239)
T PF01636_consen 4 PLSGGFSNRVYRVTTDDGRYVLKFYRPP---DAAERLRREAAVLRQLAEHGI----PVPRVLAFDTSD------------ 64 (239)
T ss_dssp EEEESSSSEEEEEEETTSEEEEEEESSH---HHHHHHHHHHHHHHHHHHTTS----BS--EEEEEEET------------
T ss_pred cCCCCCeeeEEEEEECCcEEEEEEeCCC---CCHHHHHHHHHHHHHHHhcCC----CCceEEeecccc------------
Confidence 44555 89999999 6999999855 233346699999999975444 799999854221
Q ss_pred CCCcccccccccccccccccCCCccccccccccccccccccccccCCCCCCCCCccEEEEecccCccchhhhhcCCHHHH
Q 002043 618 GKGVLDVIGKCNLTLLNCKQEEFPFGIWSKKQFEYRSAWMSVSKLSTSDGCNRIWPYIITKRCKGKMFAQLRDALSGEDV 697 (976)
Q Consensus 618 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~WpYiVm~rl~G~~l~~v~~~Ls~ed~ 697 (976)
...+++|++|++++|.++.. .++.++.
T Consensus 65 --------------------------------------------------~~~~~~~~~~~~i~g~~~~~---~~~~~~~ 91 (239)
T PF01636_consen 65 --------------------------------------------------EFNGFPYLLMEYIPGRPLDD---ELSPEQR 91 (239)
T ss_dssp --------------------------------------------------EETSEEEEEEEEESSEEHHH---TSTHHHH
T ss_pred --------------------------------------------------cccccceEEEEEeccccccc---ccccccc
Confidence 11235899999999999988 7889999
Q ss_pred HHHHHHHHHHHHHhhCCCCCCCCCCccccccCCCCCCCCCcccccccCCCCchhHH-HHHHHHHHHHHHHHHHhhhcCCC
Q 002043 698 LNLASFLGEQLRNLHLLPCPPFNESSLSDKLKTEPPFNNGFVEDVVDTSSVPAEWE-IFIRTLARKKKNLVNRLTAWGHP 776 (976)
Q Consensus 698 ~~La~~LG~~L~~LHsip~p~~~~~~~~d~~~~g~~~~~~~~~~~~~~~~~~~~W~-~~~~~l~~r~~~~~~~~~~wg~~ 776 (976)
..++.++|+++++||+++.+..+.. ....|. .....+. .... ..... .
T Consensus 92 ~~~~~~~~~~l~~lh~~~~~~~~~~-------------------------~~~~~~~~~~~~~~---~~~~-~~~~~--~ 140 (239)
T PF01636_consen 92 PELLRQLGRALAQLHQVPPPFSPFA-------------------------DWPEWRLEFLRQLE---SWTA-RLRAS--E 140 (239)
T ss_dssp HHHHHHHHHHHHHHHHSHTTCCCHT-------------------------HHHHHHHHHHHHHH---HHHH-HHHHH--C
T ss_pred ccccccchhhhhhcccccccccccc-------------------------cccccccccccccc---cccc-cccch--h
Confidence 9999999999999999973321110 011221 1222111 1100 11111 1
Q ss_pred CCHHHHHHHhh-hCChhHHHHhhhhhhccCCccCCCCCeEEecCCCCCCeEEccCCcccCCCCCCCCCCCccCCCCCCCC
Q 002043 777 IPKALIDKVDE-YIPDDFVKLLDIYQDENGLNKVCKPCSWIHSDIMDDNVYMEPCCASSRSNGNAADTGPMVNGSINGYD 855 (976)
Q Consensus 777 lp~~l~e~l~~-ylp~d~~~ll~~~~~e~~~~~~~~~pv~iHgDl~~~NILv~~~~~~~~~~~~~~~~~~~~~~~~~~~d 855 (976)
++. .+..+.. .+ ..+...+.. ..+++++|||++++|||+++.
T Consensus 141 ~~~-~~~~~~~~~~----~~~~~~~~~-------~~~~~~~HgD~~~~Nil~~~~------------------------- 183 (239)
T PF01636_consen 141 LFD-DLEELEERLL----QELEALLPK-------PLPPVLIHGDLHPGNILVDPS------------------------- 183 (239)
T ss_dssp CHH-HHHHHHHHHH----HHHHHHHHC-------CSCEEEE-SS-SGGGEEEESS-------------------------
T ss_pred hhh-hhHHHHHHHH----HHHHhhhcc-------CCCcEEEEeccccccceeeec-------------------------
Confidence 221 1222222 12 111121110 368999999999999999842
Q ss_pred ccCcCccceeeEEEeCCCCCCCCcccchhhhccc-ccCCChHHHHHHHHhcC
Q 002043 856 EFGEAKSWHCSHIIDFSNLSIGDPIYDVIPIHLD-IFRGDSSLFKQFLESYK 906 (976)
Q Consensus 856 g~~~~~~w~~sGIIDFgd~~iGDP~~Dlv~l~l~-~f~gd~~l~~~fl~~Y~ 906 (976)
.+++ |||||+++.+|||++|++.+... .........++|+++|+
T Consensus 184 ------~~~i-~iID~e~a~~~~~~~Dla~~~~~~~~~~~~~~~~~~~~~~~ 228 (239)
T PF01636_consen 184 ------DGRI-GIIDFEDAGWGDPAYDLARLLRHFGEDQDPEFRRAYLEAYG 228 (239)
T ss_dssp ------TTEE-EE--GTT-EEEETHHHHHHHHHHHTTHCHHHHHHHHHHHHT
T ss_pred ------ccee-EEEecccceECCHHHHHHHHHHHhcccCCHHHHHHHHHHhc
Confidence 1388 99999999999999999988643 23456688999999999
No 10
>TIGR02172 Fb_sc_TIGR02172 Fibrobacter succinogenes paralogous family TIGR02172. This model describes a paralogous family of five proteins, likely to be enzymes, in the rumen bacterium Fibrobacter succinogenes S85. Members show homology to proteins described by PFAM model pfam01636, a phosphotransferase enzyme family associated with resistance to aminoglycoside antibiotics. However, members of this family score below the current trusted and noise cutoffs for pfam01636.
Probab=99.73 E-value=7.6e-17 Score=172.35 Aligned_cols=203 Identities=16% Similarity=0.143 Sum_probs=135.7
Q ss_pred cccCCC-CcceEEec--ceEEEEeecCCcccccccchhHHHHHHHHHhhCCCCCcccccceeccceeecCCcceeccCCC
Q 002043 542 LPVGNG-SNPVYLMA--DCVVKIFVEGGFESSIYGLGTELEFYSLLAKVNSPLKNYIPDVLASGILYVENGSYTIVPWDG 618 (976)
Q Consensus 542 ~~~~~g-s~pv~~v~--~~v~K~~~~~~~~~s~~~~~~e~~~y~~l~~~~~~l~~~~P~~~~~g~~~~~~~~~~~~~~~~ 618 (976)
.||+.| ||.||... ++|+|++++.... ..+..|.+....|.+ +..++|++++.+...
T Consensus 7 ~~i~~G~t~~~y~~~~~~~VlR~~~~~~~~---~~i~~E~~~l~~l~~----~glpvP~~~~~~~~~------------- 66 (226)
T TIGR02172 7 TQTGEGGNGESYTHKTGKWMLKLYNPGFDK---ETIKREFDASRKVFS----LGIPTPHPFDLVEDG------------- 66 (226)
T ss_pred eeecCCCCcceeEecCCCEEEEeCCCCCCH---HHHHHHHHHHHHHHH----cCCCCCceEEEEecC-------------
Confidence 466777 99999964 7899999965422 235678776666643 337799999875322
Q ss_pred CCcccccccccccccccccCCCccccccccccccccccccccccCCCCCCCCCccEEEEecccCcc-chhhhhcCCHHHH
Q 002043 619 KGVLDVIGKCNLTLLNCKQEEFPFGIWSKKQFEYRSAWMSVSKLSTSDGCNRIWPYIITKRCKGKM-FAQLRDALSGEDV 697 (976)
Q Consensus 619 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~WpYiVm~rl~G~~-l~~v~~~Ls~ed~ 697 (976)
+ .-++||+||+|++ +.++ ...+..++
T Consensus 67 --------------------------------~--------------------~~glv~e~i~G~~~~~~~-~~~~~~~~ 93 (226)
T TIGR02172 67 --------------------------------G--------------------RLGLIYELIVGKRSFSRI-ISDNPSRL 93 (226)
T ss_pred --------------------------------C--------------------eeeeeeeecCCccchhhh-hcCCHHHH
Confidence 1 1367999999985 4333 34567788
Q ss_pred HHHHHHHHHHHHHhhCCCCCCCCCCccccccCCCCCCCCCcccccccCCCCchhHHHHHHHHHHHHHHHHHHhhhcCCCC
Q 002043 698 LNLASFLGEQLRNLHLLPCPPFNESSLSDKLKTEPPFNNGFVEDVVDTSSVPAEWEIFIRTLARKKKNLVNRLTAWGHPI 777 (976)
Q Consensus 698 ~~La~~LG~~L~~LHsip~p~~~~~~~~d~~~~g~~~~~~~~~~~~~~~~~~~~W~~~~~~l~~r~~~~~~~~~~wg~~l 777 (976)
..++..+|+++++||+++.+..+. +.-+..+.. .+.+- ...
T Consensus 94 ~~l~~~la~~l~~lH~~~~~~~~l---------------------------~~~~~~~~~-----------~l~~~-~~~ 134 (226)
T TIGR02172 94 EEIAKIFAEMAKKLHSTKCDTSTF---------------------------QSYKEKIRK-----------FIEEK-DFV 134 (226)
T ss_pred HHHHHHHHHHHHHHhCCCCCCCcH---------------------------HHHHHHHHH-----------HHHhc-cCC
Confidence 899999999999999997764321 111111111 11110 123
Q ss_pred CHHHHHHHhhhCChhHHHHhhhhhhccCCccCCCCCeEEecCCCCCCeEEccCCcccCCCCCCCCCCCccCCCCCCCCcc
Q 002043 778 PKALIDKVDEYIPDDFVKLLDIYQDENGLNKVCKPCSWIHSDIMDDNVYMEPCCASSRSNGNAADTGPMVNGSINGYDEF 857 (976)
Q Consensus 778 p~~l~e~l~~ylp~d~~~ll~~~~~e~~~~~~~~~pv~iHgDl~~~NILv~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~ 857 (976)
+..+.+.+.+++. . ...+++++|||+|++||++++.
T Consensus 135 ~~~~~~~l~~~l~--------~---------~~~~~~~~HgD~~~~Nii~~~~--------------------------- 170 (226)
T TIGR02172 135 PKDYKEKARAFIK--------E---------VPDTSTCLHGDFQIGNLITSGK--------------------------- 170 (226)
T ss_pred CHHHHHHHHHHHH--------h---------CCCCCceEecCCCCCcEEEcCC---------------------------
Confidence 4344454444441 1 0246788999999999999651
Q ss_pred CcCccceeeEEEeCCCCCCCCcccchhhhcccccCCChHHHHHHHHhcCCc
Q 002043 858 GEAKSWHCSHIIDFSNLSIGDPIYDVIPIHLDIFRGDSSLFKQFLESYKLP 908 (976)
Q Consensus 858 ~~~~~w~~sGIIDFgd~~iGDP~~Dlv~l~l~~f~gd~~l~~~fl~~Y~~~ 908 (976)
. .|||||+++.+|||++|++..++. ..-+...-++|+.-|-..
T Consensus 171 ------~-~~iIDwe~a~~Gdp~~Dla~~~~~-~~~~~~~~~~~~~~y~~~ 213 (226)
T TIGR02172 171 ------G-TYWIDLGDFGYGNPLFDLGLLFMF-CHYLDDDKLQAIFHMNAE 213 (226)
T ss_pred ------C-cEEEechhcCcCCHHHHHHHHHHh-ccCChhHHHHHHHhcCHH
Confidence 4 799999999999999999987654 344456667788887754
No 11
>COG3173 Predicted aminoglycoside phosphotransferase [General function prediction only]
Probab=99.70 E-value=9.4e-17 Score=178.71 Aligned_cols=204 Identities=20% Similarity=0.282 Sum_probs=126.4
Q ss_pred cccccC-CC-CcceEEecc----eEEEEeecCCcccccccchhHHHHHHHHHhhCCCCCcccccceeccceeecCCccee
Q 002043 540 EKLPVG-NG-SNPVYLMAD----CVVKIFVEGGFESSIYGLGTELEFYSLLAKVNSPLKNYIPDVLASGILYVENGSYTI 613 (976)
Q Consensus 540 ~~~~~~-~g-s~pv~~v~~----~v~K~~~~~~~~~s~~~~~~e~~~y~~l~~~~~~l~~~~P~~~~~g~~~~~~~~~~~ 613 (976)
+.+++. +| ||++|.+.+ +||-..+.+....+.+-...|.+ +|+.++. ..+|+|..++.-
T Consensus 28 ~~v~~~~~G~sn~t~~~~~~~~~~vlR~P~~~~~~~~~~~~~re~~---~i~~l~~-~~vP~p~~~~~~----------- 92 (321)
T COG3173 28 LIVEEISGGWSNDTFRLGDTGQKYVLRKPPRGDPVESAHDEKREYR---VIAALLD-VDVPVPRAFGLC----------- 92 (321)
T ss_pred ceeeeccCCcccceEEEecCCceEEEecCCccccchhhhHHHhHHH---HHHHhcC-CCCCCccccccc-----------
Confidence 444444 34 999999996 99994446667777676777776 5544333 357777777541
Q ss_pred ccCCCCCcccccccccccccccccCCCccccccccccccccccccccccCCCCCCC-CCccEEEEecccCccchhhhhcC
Q 002043 614 VPWDGKGVLDVIGKCNLTLLNCKQEEFPFGIWSKKQFEYRSAWMSVSKLSTSDGCN-RIWPYIITKRCKGKMFAQLRDAL 692 (976)
Q Consensus 614 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~-~~WpYiVm~rl~G~~l~~v~~~L 692 (976)
+ .. -++||.||+|++|+.+.+ .+
T Consensus 93 -------------------------------------~----------------~~~~g~pf~v~~~veGe~~~~---~~ 116 (321)
T COG3173 93 -------------------------------------G----------------EGYLGTPFYVMEWVEGEVVWS---AL 116 (321)
T ss_pred -------------------------------------c----------------cCCCCCceEEEEEecceeccC---cC
Confidence 0 22 369999999999985544 33
Q ss_pred CHHHHH-HHH-HHHHHHHHHhhCCCCCCCCCCccccccCCCCCCCCCcccccccCCCCchhHHHHHHHHHHHHHHHHHHh
Q 002043 693 SGEDVL-NLA-SFLGEQLRNLHLLPCPPFNESSLSDKLKTEPPFNNGFVEDVVDTSSVPAEWEIFIRTLARKKKNLVNRL 770 (976)
Q Consensus 693 s~ed~~-~La-~~LG~~L~~LHsip~p~~~~~~~~d~~~~g~~~~~~~~~~~~~~~~~~~~W~~~~~~l~~r~~~~~~~~ 770 (976)
+..... +.+ ..||++|++||+||..+.... |.+. ++. ...-..|..-.+. +.+..
T Consensus 117 ~~~~~~~~~~~~~l~~~La~LH~ida~~~~~~--------g~~~--~~~------~rql~~~~~~~~~-------~~~~~ 173 (321)
T COG3173 117 PPESLGRQFALDALADFLAELHSIDAAGLPDP--------GKPN--AYR------GRQLARWDDEYRR-------AKKEL 173 (321)
T ss_pred CcccchHHHHHHHHHHHHHHHhCCCCcCCCCC--------CccC--ccc------cchhhHHHHHHHH-------HHHhc
Confidence 333222 444 499999999999995444332 1110 000 0112333322221 11111
Q ss_pred hhcCCCCCHHHHHHHhhhCChhHHHHhhhhhhccCCccCCCCCeEEecCCCCCCeEEccCCcccCCCCCCCCCCCccCCC
Q 002043 771 TAWGHPIPKALIDKVDEYIPDDFVKLLDIYQDENGLNKVCKPCSWIHSDIMDDNVYMEPCCASSRSNGNAADTGPMVNGS 850 (976)
Q Consensus 771 ~~wg~~lp~~l~e~l~~ylp~d~~~ll~~~~~e~~~~~~~~~pv~iHgDl~~~NILv~~~~~~~~~~~~~~~~~~~~~~~ 850 (976)
+..+ ...+.+..++..+. .+...++||+||||+++|||+++.
T Consensus 174 ---~~~~--p~~~~~~~Wl~~~~-------------p~~~~~~~lvHGD~~~gNlii~~~-------------------- 215 (321)
T COG3173 174 ---GGRI--PLADRLIKWLEANR-------------PPWAGPPVLVHGDYRPGNLIIDPG-------------------- 215 (321)
T ss_pred ---cCCC--chHHHHHHHHHhcC-------------CCcCCCceeeeCCcccCCEEEeCC--------------------
Confidence 1122 23344444552211 012579999999999999999873
Q ss_pred CCCCCccCcCccceeeEEEeCCCCCCCCcccchhhh-cc
Q 002043 851 INGYDEFGEAKSWHCSHIIDFSNLSIGDPIYDVIPI-HL 888 (976)
Q Consensus 851 ~~~~dg~~~~~~w~~sGIIDFgd~~iGDP~~Dlv~l-~l 888 (976)
+++||||||.+.+|||+.||+.+ |.
T Consensus 216 -------------~~~gVlDwe~~~lGDP~~Dl~~~~W~ 241 (321)
T COG3173 216 -------------RPTGVLDWELATLGDPLEDLAIICWT 241 (321)
T ss_pred -------------CeeEEEeccccccCCcHHHHHHHHhc
Confidence 46999999999999999999988 53
No 12
>cd05154 ACAD10_11_like Acyl-CoA dehydrogenase (ACAD) 10 and 11, N-terminal domain, and similar proteins. This subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This subfamily is composed of bacterial and eukaryotic proteins with similarity to the N-terminal domains of vertebrate ACAD10 and ACAD11. ACADs are a family of flavoproteins that are involved in the beta-oxidation of fatty acyl-CoA derivatives. ACAD deficiency can cause metabolic disorders including muscle fatigue, hypoglycemia, and hepatic lipidosis, among them. There are at least 11 distinct ACADs, some of which show distinct substrate specificities to either straight-chain or branched-chain fatty acids. ACAD10 is widely expressed in human tissues and is highly expressed in liver, kidney, pancreas, and spleen. ACAD10 and ACAD11 contain
Probab=99.68 E-value=8.1e-16 Score=160.09 Aligned_cols=205 Identities=20% Similarity=0.197 Sum_probs=129.1
Q ss_pred ccCCC-CcceEEec-----ceEEEEeecCCcccccccchhHHHHHHHHHhhCCCCCcccccceeccceeecCCcceeccC
Q 002043 543 PVGNG-SNPVYLMA-----DCVVKIFVEGGFESSIYGLGTELEFYSLLAKVNSPLKNYIPDVLASGILYVENGSYTIVPW 616 (976)
Q Consensus 543 ~~~~g-s~pv~~v~-----~~v~K~~~~~~~~~s~~~~~~e~~~y~~l~~~~~~l~~~~P~~~~~g~~~~~~~~~~~~~~ 616 (976)
|+++| +|-||.|. .+|||+............+..|.+++..|+.. ..++|++++.....
T Consensus 5 ~l~~G~~n~~~~v~~~~g~~~ilK~~~~~~~~~~~~~~~~E~~~~~~l~~~----~~~vp~~~~~~~~~----------- 69 (223)
T cd05154 5 QLSGGQSNLTYLLTAGGGRRLVLRRPPPGALLPSAHDVAREYRVLRALAGT----GVPVPKVLALCEDP----------- 69 (223)
T ss_pred ecCCCccceEEEEEecCCcceEEEeCCCcccCcccccHHHHHHHHHHhhCC----CCCCCCEEEECCCC-----------
Confidence 45666 99999985 68999987432223344577999988888643 35789988763211
Q ss_pred CCCCcccccccccccccccccCCCccccccccccccccccccccccCCCCCCCCCccEEEEecccCccchhhh--hcCCH
Q 002043 617 DGKGVLDVIGKCNLTLLNCKQEEFPFGIWSKKQFEYRSAWMSVSKLSTSDGCNRIWPYIITKRCKGKMFAQLR--DALSG 694 (976)
Q Consensus 617 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~WpYiVm~rl~G~~l~~v~--~~Ls~ 694 (976)
...+.+|+||++++|.++.+.+ ..++.
T Consensus 70 ---------------------------------------------------~~~~~~~~v~e~i~G~~l~~~~~~~~~~~ 98 (223)
T cd05154 70 ---------------------------------------------------SVLGTPFYVMERVDGRVLRDRLLRPELSP 98 (223)
T ss_pred ---------------------------------------------------CccCCceEEEEEeCCEecCCCCCCCCCCH
Confidence 0112579999999999998866 46888
Q ss_pred HHHHHHHHHHHHHHHHhhCCCCCCCCCCccccccCCCCCCCCCcccccccCCCCchhHHHHHHHHHHHHHHHHHHhhhcC
Q 002043 695 EDVLNLASFLGEQLRNLHLLPCPPFNESSLSDKLKTEPPFNNGFVEDVVDTSSVPAEWEIFIRTLARKKKNLVNRLTAWG 774 (976)
Q Consensus 695 ed~~~La~~LG~~L~~LHsip~p~~~~~~~~d~~~~g~~~~~~~~~~~~~~~~~~~~W~~~~~~l~~r~~~~~~~~~~wg 774 (976)
+++..++.++|+.|+.||+++.+..+.. ... .....-...+.... +.+..-+
T Consensus 99 ~~~~~i~~~i~~~l~~lH~~~~~~~~~~--------~~~-------------~~~~~~~~~~~~~~-------~~~~~~~ 150 (223)
T cd05154 99 EERRALARALADTLAALHSVDPAAVGLG--------DLG-------------RPGGYLERQVARWR-------RQYDASR 150 (223)
T ss_pred HHHHHHHHHHHHHHHHHhCCChhhcCCc--------ccC-------------CCCchHHHHHHHHH-------HHHHhhc
Confidence 9999999999999999999986543321 000 00000011111111 1111100
Q ss_pred CCCCHHHHHHHhhhCChhHHHHhhhhhhccCCccCCCCCeEEecCCCCCCeEEccCCcccCCCCCCCCCCCccCCCCCCC
Q 002043 775 HPIPKALIDKVDEYIPDDFVKLLDIYQDENGLNKVCKPCSWIHSDIMDDNVYMEPCCASSRSNGNAADTGPMVNGSINGY 854 (976)
Q Consensus 775 ~~lp~~l~e~l~~ylp~d~~~ll~~~~~e~~~~~~~~~pv~iHgDl~~~NILv~~~~~~~~~~~~~~~~~~~~~~~~~~~ 854 (976)
...+ ..++.+.+.+ ... .....++|++|||++++|||++++.
T Consensus 151 ~~~~-~~~~~~~~~~-------~~~-------~~~~~~~~l~HgD~~~~Nil~~~~~----------------------- 192 (223)
T cd05154 151 TDEP-PAMERLLRWL-------EAH-------LPADSRPGLVHGDYRLGNVLFHPDE----------------------- 192 (223)
T ss_pred cccc-HHHHHHHHHH-------Hhh-------CCCCCCcEEEECCCCcccEEEcCCC-----------------------
Confidence 1111 1112221111 111 0112589999999999999997621
Q ss_pred CccCcCccceeeEEEeCCCCCCCCcccchhhhc
Q 002043 855 DEFGEAKSWHCSHIIDFSNLSIGDPIYDVIPIH 887 (976)
Q Consensus 855 dg~~~~~~w~~sGIIDFgd~~iGDP~~Dlv~l~ 887 (976)
.++++||||+.+.+|||++|++...
T Consensus 193 --------~~~~~iID~e~~~~g~~~~Dla~~~ 217 (223)
T cd05154 193 --------PRVVAVLDWELATLGDPLADLGWLL 217 (223)
T ss_pred --------CcEEEEEeccccccCChHHHHHHHH
Confidence 1588999999999999999998653
No 13
>PLN02876 acyl-CoA dehydrogenase
Probab=99.65 E-value=1.4e-15 Score=190.17 Aligned_cols=213 Identities=15% Similarity=0.202 Sum_probs=132.5
Q ss_pred ccCCC-CcceEEec--------ceEEEEeecCCcccccccchhHHHHHHHHHhhCCCCCcccccceeccceeecCCccee
Q 002043 543 PVGNG-SNPVYLMA--------DCVVKIFVEGGFESSIYGLGTELEFYSLLAKVNSPLKNYIPDVLASGILYVENGSYTI 613 (976)
Q Consensus 543 ~~~~g-s~pv~~v~--------~~v~K~~~~~~~~~s~~~~~~e~~~y~~l~~~~~~l~~~~P~~~~~g~~~~~~~~~~~ 613 (976)
++++| ||++|+|. .+|||..|.+....+.+.+..|.+.+..|.... .+++|++++.+...
T Consensus 45 ~l~gG~sn~ty~l~~~~~~~~~~~VLR~~p~~~~~~~~~~~~rE~~~l~~L~~~~---~vpVP~v~~~~~d~-------- 113 (822)
T PLN02876 45 QFGHGQSNPTFLLEVGNGGSVKRYVLRKKPPGKLLQSAHAVEREYQVLRALGEHT---DVPVPKVYCLCTDA-------- 113 (822)
T ss_pred EeCCCCcCceEEEEECCCCcceeEEEEeCCCCccCccHHHHHHHHHHHHHHhhcC---CCCCCcEEEEecCC--------
Confidence 55666 99999984 479999996654445566778998888775322 37899999663211
Q ss_pred ccCCCCCcccccccccccccccccCCCccccccccccccccccccccccCCCCCCCCCccEEEEecccCccchh-hhhcC
Q 002043 614 VPWDGKGVLDVIGKCNLTLLNCKQEEFPFGIWSKKQFEYRSAWMSVSKLSTSDGCNRIWPYIITKRCKGKMFAQ-LRDAL 692 (976)
Q Consensus 614 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~WpYiVm~rl~G~~l~~-v~~~L 692 (976)
...+.||+||+||+|..+.+ .++.+
T Consensus 114 ------------------------------------------------------~v~G~~flVME~v~G~~~~~~~~~~~ 139 (822)
T PLN02876 114 ------------------------------------------------------SVIGTAFYIMEYLEGRIFVDPKLPGV 139 (822)
T ss_pred ------------------------------------------------------CcCCCceEEEEecCCcccCCccCCCC
Confidence 12236899999999988654 45678
Q ss_pred CHHHHHHHHHHHHHHHHHhhCCCCCCCCCCccccccCCCCCCCCCcccccccCCCCchhHHHHHHHHHHHHHHHHHHhhh
Q 002043 693 SGEDVLNLASFLGEQLRNLHLLPCPPFNESSLSDKLKTEPPFNNGFVEDVVDTSSVPAEWEIFIRTLARKKKNLVNRLTA 772 (976)
Q Consensus 693 s~ed~~~La~~LG~~L~~LHsip~p~~~~~~~~d~~~~g~~~~~~~~~~~~~~~~~~~~W~~~~~~l~~r~~~~~~~~~~ 772 (976)
+.+++.+++.++++.|++||+++.+..+.. .. |.+. ++. ...-..|...+.. .. .
T Consensus 140 ~~~~r~~l~~~l~~~La~LH~vd~~~~gl~-~~-----g~~~--~~~------~~~l~~w~~~~~~----------~~-~ 194 (822)
T PLN02876 140 APERRRAIYRATAKVLAALHSADVDAIGLG-KY-----GRRD--NYC------KRQVERWAKQYLA----------ST-G 194 (822)
T ss_pred CHHHHHHHHHHHHHHHHHHhCCCchhcChh-hc-----CCCC--chH------HHHHHHHHHHHHH----------hh-c
Confidence 889999999999999999999987543321 00 1000 000 0001122221110 00 0
Q ss_pred cCCCCCHHHHHHHhhhCChhHHHHhhhhhhccCCccCCCCCeEEecCCCCCCeEEccCCcccCCCCCCCCCCCccCCCCC
Q 002043 773 WGHPIPKALIDKVDEYIPDDFVKLLDIYQDENGLNKVCKPCSWIHSDIMDDNVYMEPCCASSRSNGNAADTGPMVNGSIN 852 (976)
Q Consensus 773 wg~~lp~~l~e~l~~ylp~d~~~ll~~~~~e~~~~~~~~~pv~iHgDl~~~NILv~~~~~~~~~~~~~~~~~~~~~~~~~ 852 (976)
.+...+...++.+.+++..+. +.. .....++++|||||+++|||+++..
T Consensus 195 ~~~~~~~~~~~~l~~wL~~~~----P~~------~~~~~~~~LvHGD~~~~Nvl~~~~~--------------------- 243 (822)
T PLN02876 195 EGKPPRNPKMLELIDWLRENI----PAE------DSTGAGTGIVHGDFRIDNLVFHPTE--------------------- 243 (822)
T ss_pred ccCCCCChhHHHHHHHHHhcC----CCc------cccCCCcceEecCcccccEEEcCCC---------------------
Confidence 000111122333333331110 000 0001368999999999999998621
Q ss_pred CCCccCcCccceeeEEEeCCCCCCCCcccchhhh
Q 002043 853 GYDEFGEAKSWHCSHIIDFSNLSIGDPIYDVIPI 886 (976)
Q Consensus 853 ~~dg~~~~~~w~~sGIIDFgd~~iGDP~~Dlv~l 886 (976)
+ +++|||||+.+.+|||.+||..+
T Consensus 244 ---~-------~v~aVLDWE~a~~GdPl~DLa~~ 267 (822)
T PLN02876 244 ---D-------RVIGILDWELSTLGNQMCDVAYS 267 (822)
T ss_pred ---C-------eEEEEEeeeccccCChHHHHHHH
Confidence 1 79999999999999999998654
No 14
>PRK10593 hypothetical protein; Provisional
Probab=99.63 E-value=1.3e-14 Score=161.33 Aligned_cols=249 Identities=13% Similarity=0.101 Sum_probs=149.8
Q ss_pred ccCCC-CcceEEec----ceEEEEeecCCcccccccchhHHHHHHHHHhhCCCCCcccccceeccceeecCCcceeccCC
Q 002043 543 PVGNG-SNPVYLMA----DCVVKIFVEGGFESSIYGLGTELEFYSLLAKVNSPLKNYIPDVLASGILYVENGSYTIVPWD 617 (976)
Q Consensus 543 ~~~~g-s~pv~~v~----~~v~K~~~~~~~~~s~~~~~~e~~~y~~l~~~~~~l~~~~P~~~~~g~~~~~~~~~~~~~~~ 617 (976)
++++| ++-||.++ .+|||++...... .-+.+|.+--..|++.+ .+++|+|++.|...
T Consensus 21 ~i~~G~~~~vy~~~~~~~~~~~k~~~~~~~~---~~~~~Ea~~L~~L~~~~---~vpVP~V~~~~~~~------------ 82 (297)
T PRK10593 21 CISEQPYAALWALYDSQGNPMPLMARSFSTP---GVAQQEAWKLSMLARSG---TVRMPTVYGVMTHE------------ 82 (297)
T ss_pred ecCCccceeEEEEEcCCCCEEEEEecccccc---hHHHHHHHHHHHHccCC---CCCcCcEEEEeccC------------
Confidence 56666 99999986 3689997653111 23568887555665433 38999999875331
Q ss_pred CCCcccccccccccccccccCCCccccccccccccccccccccccCCCCCCCCCccEEEEecccCccchhhhhcCCHHHH
Q 002043 618 GKGVLDVIGKCNLTLLNCKQEEFPFGIWSKKQFEYRSAWMSVSKLSTSDGCNRIWPYIITKRCKGKMFAQLRDALSGEDV 697 (976)
Q Consensus 618 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~WpYiVm~rl~G~~l~~v~~~Ls~ed~ 697 (976)
...+-+|+||++|+|.++.+. .++.++.
T Consensus 83 --------------------------------------------------~~~g~~~LVmE~i~G~~~~~~--~~~~~~~ 110 (297)
T PRK10593 83 --------------------------------------------------QSPGPDVLLLERLRGVSVEAP--ARTPERW 110 (297)
T ss_pred --------------------------------------------------CcCCCeEEEEeccCCEecCCC--CCCHHHH
Confidence 112248999999999988773 4567778
Q ss_pred HHHHHHHHHHHHHhhCCCCCCCCCCccccccCCCCCCCCCcccccccCCCCchhHHHHHHHHHHHHHHH---HHHhhhcC
Q 002043 698 LNLASFLGEQLRNLHLLPCPPFNESSLSDKLKTEPPFNNGFVEDVVDTSSVPAEWEIFIRTLARKKKNL---VNRLTAWG 774 (976)
Q Consensus 698 ~~La~~LG~~L~~LHsip~p~~~~~~~~d~~~~g~~~~~~~~~~~~~~~~~~~~W~~~~~~l~~r~~~~---~~~~~~wg 774 (976)
..++..+|+.|++||+++..++.. .. . ......|..|+. +|..-. ++.....
T Consensus 111 ~~l~~~l~~~La~LH~~~~~g~~g----------~~--~---------~~~~~~w~~f~~---~rl~~~~~~~~~~~~~- 165 (297)
T PRK10593 111 EQLKDQIVEGLLAWHRIDSRGCVG----------AV--D---------STQENLWPSWYQ---QRVEVLWTTLNQFNNT- 165 (297)
T ss_pred HHHHHHHHHHHHHHhCCChhhccc----------CC--C---------CcccccHHHHHH---HHHHHHHhhhhhcccc-
Confidence 899999999999999986543321 10 0 013356777764 222211 1222221
Q ss_pred CCCCHHH---HHHHhhhCChhHHHHhhhhhhccCCccCCCCCeEEecCCCCCCeEEccCCcccCCCCCCCCCCCccCCCC
Q 002043 775 HPIPKAL---IDKVDEYIPDDFVKLLDIYQDENGLNKVCKPCSWIHSDIMDDNVYMEPCCASSRSNGNAADTGPMVNGSI 851 (976)
Q Consensus 775 ~~lp~~l---~e~l~~ylp~d~~~ll~~~~~e~~~~~~~~~pv~iHgDl~~~NILv~~~~~~~~~~~~~~~~~~~~~~~~ 851 (976)
+++... +..+.+.+|. +++. ...+|+++|||||++||++++..
T Consensus 166 -~l~~~~~~~~~~l~~~l~~----~L~~---------~~~~psLlHGDlw~gNvl~~~~~-------------------- 211 (297)
T PRK10593 166 -GLTMQDRRILFRTRECLPA----LFEG---------FNDNCVLVHGNFTLRSMLKDPRS-------------------- 211 (297)
T ss_pred -CCChhHHHHHHHHHHhchh----hhcc---------CCCCCeeEeCCCCcccEEECCCC--------------------
Confidence 222221 1112222221 1111 12469999999999999997521
Q ss_pred CCCCccCcCccceeeEEEeCCCCCCCCcccchhhhcccccCCChHHHHHHHHhcCCccccccccCCCCCCchhhHHHHHH
Q 002043 852 NGYDEFGEAKSWHCSHIIDFSNLSIGDPIYDVIPIHLDIFRGDSSLFKQFLESYKLPLVRRMQQHGSGGGKFSRLSYHAM 931 (976)
Q Consensus 852 ~~~dg~~~~~~w~~sGIIDFgd~~iGDP~~Dlv~l~l~~f~gd~~l~~~fl~~Y~~~~~~~~~~~~~~~~~~~~~~~r~m 931 (976)
| ++..|||...+.+||+.+|++.+ +|.|=+ .+|+++|.--.... .+-.-++-.|.+
T Consensus 212 ----~-------~i~~liDPa~~~~g~rE~DLa~~---~~~~f~---~~f~~~Y~~~~pl~------~g~~~R~~ly~L- 267 (297)
T PRK10593 212 ----D-------QLLAMLNPGLMLWAPREYELFRL---MDNGLA---EQLLWRYLQKAPVA------ESFIWRRWLYVL- 267 (297)
T ss_pred ----C-------ceEEEECchHhCCCCHHHhHHHh---hcCCcc---HHHHHHHHHhCCCC------ccHHHHHHHHHH-
Confidence 1 56789999999999999999765 343422 35666664221110 011113444444
Q ss_pred HHhhhcccChhhHH
Q 002043 932 CYCILHDDNVLGTI 945 (976)
Q Consensus 932 ~y~ilh~~~~l~~~ 945 (976)
|-+|.|.|.++.+
T Consensus 268 -y~~l~h~~~fG~~ 280 (297)
T PRK10593 268 -WDEVAQLVNTGRF 280 (297)
T ss_pred -HHHHHHHHHhCcc
Confidence 6777777777765
No 15
>TIGR02721 ycfN_thiK thiamine kinase. Members of this family are the ycfN gene product of Escherichia coli, now identified as the salvage enzyme thiamine kinase (thiK), and additional proteobacterial homologs taken to be orthologs with equivalent function.
Probab=99.63 E-value=6.1e-15 Score=159.60 Aligned_cols=114 Identities=18% Similarity=0.142 Sum_probs=75.4
Q ss_pred CCCCeEEecCCCCCCeEEccCCcccCCCCCCCCCCCccCCCCCCCCccCcCccceeeEEEeCCCCCCCCcccchhhhccc
Q 002043 810 CKPCSWIHSDIMDDNVYMEPCCASSRSNGNAADTGPMVNGSINGYDEFGEAKSWHCSHIIDFSNLSIGDPIYDVIPIHLD 889 (976)
Q Consensus 810 ~~~pv~iHgDl~~~NILv~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~~~~~~w~~sGIIDFgd~~iGDP~~Dlv~l~l~ 889 (976)
..++|++|||++++|||++++ . .+||||+.+++|||++||+.++..
T Consensus 143 ~~~~~l~H~Dl~~~Nil~~~~---------------------------------~-~~lIDwE~a~~gdp~~DLa~~~~~ 188 (256)
T TIGR02721 143 PLPLAPLHMDVHAYNLVVTPQ---------------------------------G-LKLIDWEYASDGDIALELAAIIRA 188 (256)
T ss_pred CCCCeeecCCCCcCcEEEeCC---------------------------------C-CEEEeccccCcCCHHHHHHHHHHh
Confidence 358999999999999999751 2 489999999999999999987554
Q ss_pred ccCCChHHHHHHHHhcCCccccccccCCCCCCchhhHHHHHHHHhhhcccChhhHHhhhcccccCCCCHHHHHHHHhccc
Q 002043 890 IFRGDSSLFKQFLESYKLPLVRRMQQHGSGGGKFSRLSYHAMCYCILHDDNVLGTIFSTWKELRTAKSWEEVEMTVWGEL 969 (976)
Q Consensus 890 ~f~gd~~l~~~fl~~Y~~~~~~~~~~~~~~~~~~~~~~~r~m~y~ilh~~~~l~~~~~~~~~~~~~~s~~el~~~~~g~~ 969 (976)
. +.+..+.|++.|....... ....+..++..|......-.+-++.-.|.. +..+...+.++.++..|
T Consensus 189 ~---~~~~~~~~l~~Y~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~-~~~~~~~~~a~~~~~~~ 255 (256)
T TIGR02721 189 N---DEEQQQDFVQRYCQRRRIY---------SISVLWRQVKAWQPWVDYMAALWFELRWQQ-TGDPQFLELAQELRHRL 255 (256)
T ss_pred C---CHHHHHHHHHHHHHhhCCc---------cHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-cCcHHHHHHHHHHHHhh
Confidence 3 6677788999998331110 012344444444433332233333333333 45677788888877665
Q ss_pred c
Q 002043 970 N 970 (976)
Q Consensus 970 ~ 970 (976)
+
T Consensus 256 ~ 256 (256)
T TIGR02721 256 C 256 (256)
T ss_pred C
Confidence 3
No 16
>cd05153 HomoserineK_II Homoserine Kinase, type II. Homoserine kinase is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This subfamily is composed of unusual homoserine kinases, from a subset of bacteria, which have a PK fold. These proteins do not bear any similarity to the GHMP family homoserine kinases present in most bacteria and eukaryotes. Homoserine kinase catalyzes the transfer of the gamma-phosphoryl group from ATP to L-homoserine producing L-homoserine phosphate, an intermediate in the production of the amino acids threonine, methionine, and isoleucine.
Probab=99.62 E-value=1.5e-14 Score=159.22 Aligned_cols=230 Identities=21% Similarity=0.215 Sum_probs=143.4
Q ss_pred HHHHHHHhhCCCCCCccccccccCCC-CcceEEec----ceEEEEeecCCcccccccchhHHHHHHHHHhhCCCCCcccc
Q 002043 522 ELLEEICNFHKLPTLTAEEKLPVGNG-SNPVYLMA----DCVVKIFVEGGFESSIYGLGTELEFYSLLAKVNSPLKNYIP 596 (976)
Q Consensus 522 ~~~~~~~~~~~l~~~~~~~~~~~~~g-s~pv~~v~----~~v~K~~~~~~~~~s~~~~~~e~~~y~~l~~~~~~l~~~~P 596 (976)
..+++|++..++..++..+++ .+| +|.||.|. .+|||+++. . +...+..|.++...|++. + .++|
T Consensus 2 ~~l~~~l~~y~~~~~~~i~~i--~~G~~n~~y~v~~~~~~~vLr~~~~-~---~~~~~~~e~~~l~~L~~~-g---~~vp 71 (296)
T cd05153 2 EELASFLADYDLGELLSFEGI--SAGIENTNYFVTTDSGRYVLTLFEK-V---SAEELPFFLALLDHLAER-G---LPVP 71 (296)
T ss_pred HHHHHHHHHcCCCchhheecc--cCccccceEEEEeCCCcEEEEEcCC-C---ChHhccHHHHHHHHHHHC-C---CCCC
Confidence 457889999997555554544 455 79999995 899999985 1 223366788888888653 3 4578
Q ss_pred cceeccceeecCCcceeccCCCCCcccccccccccccccccCCCccccccccccccccccccccccCCCCCCCCCccEEE
Q 002043 597 DVLASGILYVENGSYTIVPWDGKGVLDVIGKCNLTLLNCKQEEFPFGIWSKKQFEYRSAWMSVSKLSTSDGCNRIWPYII 676 (976)
Q Consensus 597 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~WpYiV 676 (976)
+++.+.. |.+-+ ..-+++|+|
T Consensus 72 ~~i~~~~-----g~~~~------------------------------------------------------~~~~~~~~l 92 (296)
T cd05153 72 RPIADRD-----GEYLS------------------------------------------------------ELAGKPAAL 92 (296)
T ss_pred ccccCCC-----CcEee------------------------------------------------------eeCCceEEE
Confidence 8876521 11000 011368999
Q ss_pred EecccCccchhhhhcCCHHHHHHHHHHHHHHHHHhhCCCCCCCCCCccccccCCCCCCCCCcccccccCCCCchhHHHHH
Q 002043 677 TKRCKGKMFAQLRDALSGEDVLNLASFLGEQLRNLHLLPCPPFNESSLSDKLKTEPPFNNGFVEDVVDTSSVPAEWEIFI 756 (976)
Q Consensus 677 m~rl~G~~l~~v~~~Ls~ed~~~La~~LG~~L~~LHsip~p~~~~~~~~d~~~~g~~~~~~~~~~~~~~~~~~~~W~~~~ 756 (976)
|+|++|.++.. ++. ....++|+.|++||.++.. +... . + ......|....
T Consensus 93 ~~~i~G~~~~~----~~~----~~~~~lg~~La~lH~~~~~-~~~~--~-------~------------~~~~~~~~~~~ 142 (296)
T cd05153 93 VEFLAGEHLTR----PTA----AHCRQIGEALARLHLAAQS-FPGE--R-------N------------NLRGLAWIREL 142 (296)
T ss_pred EEeCCCCCCCC----CCH----HHHHHHHHHHHHHHHHhcc-CCcc--C-------C------------CcCCcHHHHHH
Confidence 99999998865 232 4567889999999987532 1110 0 0 01123454432
Q ss_pred HHHHHHHHHHHHHhhhcCCCCCHHHHHHHhhhCChhHHHHhhhhhhccCCccCCCCCeEEecCCCCCCeEEccCCcccCC
Q 002043 757 RTLARKKKNLVNRLTAWGHPIPKALIDKVDEYIPDDFVKLLDIYQDENGLNKVCKPCSWIHSDIMDDNVYMEPCCASSRS 836 (976)
Q Consensus 757 ~~l~~r~~~~~~~~~~wg~~lp~~l~e~l~~ylp~d~~~ll~~~~~e~~~~~~~~~pv~iHgDl~~~NILv~~~~~~~~~ 836 (976)
.... . ..+.....+.+.+.+ ..+.. . .....+.+++|||++++|||+++.
T Consensus 143 ~~~~------~-------~~l~~~~~~~~~~~~--------~~l~~-~--~~~~~~~~l~HgD~~~~Nil~~~~------ 192 (296)
T cd05153 143 GKDL------L-------PLLSAEDRALLADEL--------ARQDA-F--DPSDLPRGVIHADLFRDNVLFDGD------ 192 (296)
T ss_pred HHHh------c-------cccCHHHHHHHHHHH--------HHHHh-h--hhhcCCCcCCccCcCcccEEEeCC------
Confidence 2111 0 112223333332222 11110 0 111357899999999999999752
Q ss_pred CCCCCCCCCccCCCCCCCCccCcCccceeeEEEeCCCCCCCCcccchhhhcccc-c--CC--ChHHHHHHHHhcCC
Q 002043 837 NGNAADTGPMVNGSINGYDEFGEAKSWHCSHIIDFSNLSIGDPIYDVIPIHLDI-F--RG--DSSLFKQFLESYKL 907 (976)
Q Consensus 837 ~~~~~~~~~~~~~~~~~~dg~~~~~~w~~sGIIDFgd~~iGDP~~Dlv~l~l~~-f--~g--d~~l~~~fl~~Y~~ 907 (976)
+++|||||+++.+|+|++|++.+...+ + .+ +....++|+++|..
T Consensus 193 ---------------------------~~~~iIDfe~a~~g~~~~Dla~~~~~~~~~~~~~~~~~~~~~~l~gY~~ 241 (296)
T cd05153 193 ---------------------------ELSGVIDFYFACTDAFLYDLAITLNDWCFDEDGALDPERAQALLAGYQA 241 (296)
T ss_pred ---------------------------ceEEEeehhhhcCchHHHHHHHHHHHHHhCccCCCCHHHHHHHHHHHHh
Confidence 588999999999999999998764332 1 11 56788999999984
No 17
>PRK05231 homoserine kinase; Provisional
Probab=99.58 E-value=5.4e-14 Score=156.72 Aligned_cols=64 Identities=31% Similarity=0.403 Sum_probs=52.6
Q ss_pred CCCeEEecCCCCCCeEEccCCcccCCCCCCCCCCCccCCCCCCCCccCcCccceeeEEEeCCCCCCCCcccchhhhcccc
Q 002043 811 KPCSWIHSDIMDDNVYMEPCCASSRSNGNAADTGPMVNGSINGYDEFGEAKSWHCSHIIDFSNLSIGDPIYDVIPIHLDI 890 (976)
Q Consensus 811 ~~pv~iHgDl~~~NILv~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~~~~~~w~~sGIIDFgd~~iGDP~~Dlv~l~l~~ 890 (976)
.|..+||||++++|||++++ +++|||||+++.+|+|+||++.+...+
T Consensus 185 lp~~liHgD~~~~Nil~~~~---------------------------------~~~~iIDf~~~~~~~~~~DlA~~~~~~ 231 (319)
T PRK05231 185 LPRGVIHADLFRDNVLFEGD---------------------------------RLSGFIDFYFACNDKLLYDVAITLNDW 231 (319)
T ss_pred CCcccCCCCCCCCcEEEECC---------------------------------ceEEEEecccccCCchHHHHHHHHHHH
Confidence 57789999999999999742 689999999999999999998774332
Q ss_pred c---CC--ChHHHHHHHHhcCC
Q 002043 891 F---RG--DSSLFKQFLESYKL 907 (976)
Q Consensus 891 f---~g--d~~l~~~fl~~Y~~ 907 (976)
. .+ +.++.++|++||..
T Consensus 232 ~~~~~~~~~~~~~~~~l~gY~~ 253 (319)
T PRK05231 232 CFEADGSLDATKARALLAAYQS 253 (319)
T ss_pred HccCCCCcCHHHHHHHHHHHhh
Confidence 1 12 45789999999974
No 18
>TIGR00938 thrB_alt homoserine kinase, Neisseria type. Homoserine kinase is required in the biosynthesis of threonine from aspartate.The member of this family from Pseudomonas aeruginosa was shown by direct assay and complementation to act specifically as a homoserine kinase.
Probab=99.53 E-value=5.1e-13 Score=148.58 Aligned_cols=234 Identities=18% Similarity=0.172 Sum_probs=140.8
Q ss_pred HHHHHHHhhCCCCCCccccccccCCC-CcceEEec----ceEEEEeecCCcccccccchhHHHHHHHHHhhCCCCCcccc
Q 002043 522 ELLEEICNFHKLPTLTAEEKLPVGNG-SNPVYLMA----DCVVKIFVEGGFESSIYGLGTELEFYSLLAKVNSPLKNYIP 596 (976)
Q Consensus 522 ~~~~~~~~~~~l~~~~~~~~~~~~~g-s~pv~~v~----~~v~K~~~~~~~~~s~~~~~~e~~~y~~l~~~~~~l~~~~P 596 (976)
+.|.+++..+++..++... |+++| +|-||.|. .+|+|++-... +...+..|+++..-|++ ++ .++|
T Consensus 10 ~~l~~~l~~y~~~~~~~i~--~~~~G~~n~~y~v~t~~~~~vLK~~~~~~---~~~~i~~e~~~l~~L~~-~g---~pvp 80 (307)
T TIGR00938 10 EEMSSFLDGYDLGELLSLK--GIAEGVENSNYLLTTDVGRYILTLYEKRV---KAEELPFFLALTTHLAA-RG---LPVP 80 (307)
T ss_pred HHHHHHHHhcCCCCceecc--ccCCccccceEEEEeCCCcEEEEEecCCC---CHHHHHHHHHHHHHHHH-CC---CCCC
Confidence 4567778888886553322 56777 69999986 89999986432 11224567787777754 33 4588
Q ss_pred cceeccceeecCCcceeccCCCCCcccccccccccccccccCCCccccccccccccccccccccccCCCCCCCCCccEEE
Q 002043 597 DVLASGILYVENGSYTIVPWDGKGVLDVIGKCNLTLLNCKQEEFPFGIWSKKQFEYRSAWMSVSKLSTSDGCNRIWPYII 676 (976)
Q Consensus 597 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~WpYiV 676 (976)
+++.+..- .+ +....+.+|+|
T Consensus 81 ~~i~t~~g-----~~------------------------------------------------------~~~~~g~~~~l 101 (307)
T TIGR00938 81 KPVKSRDG-----RQ------------------------------------------------------LSTLAGKPACL 101 (307)
T ss_pred ccccCCCC-----Ce------------------------------------------------------ehhcCCeEEEE
Confidence 88875210 00 00012367999
Q ss_pred EecccCccchhhhhcCCHHHHHHHHHHHHHHHHHhhCCCCCCCCCCccccccCCCCCCCCCcccccccCCCCchhHHHHH
Q 002043 677 TKRCKGKMFAQLRDALSGEDVLNLASFLGEQLRNLHLLPCPPFNESSLSDKLKTEPPFNNGFVEDVVDTSSVPAEWEIFI 756 (976)
Q Consensus 677 m~rl~G~~l~~v~~~Ls~ed~~~La~~LG~~L~~LHsip~p~~~~~~~~d~~~~g~~~~~~~~~~~~~~~~~~~~W~~~~ 756 (976)
|+|++|..+.. .+. ..+.++|+.+++||.... ++... .. .......|..+.
T Consensus 102 ~e~i~G~~~~~----~~~----~~~~~~G~~LA~lH~~~~-~~~~~---------~~-----------~~~~~~~w~~~~ 152 (307)
T TIGR00938 102 VEFLQGLSVGR----PTA----MHCRPVGEVLAWMHLAGA-HFPEN---------RK-----------NSLRLEAWHILA 152 (307)
T ss_pred EEeCCCCCCCC----CCH----HHHHHHHHHHHHHHhhhc-cCCCC---------CC-----------CCCChHHHHHHH
Confidence 99999988753 122 246789999999998742 22211 00 001235676654
Q ss_pred HHHHHHHHHHHHHhhhcCCCCCHHHHHHHhhhCChhHHHHhhhhhhccCCccCCCCCeEEecCCCCCCeEEccCCcccCC
Q 002043 757 RTLARKKKNLVNRLTAWGHPIPKALIDKVDEYIPDDFVKLLDIYQDENGLNKVCKPCSWIHSDIMDDNVYMEPCCASSRS 836 (976)
Q Consensus 757 ~~l~~r~~~~~~~~~~wg~~lp~~l~e~l~~ylp~d~~~ll~~~~~e~~~~~~~~~pv~iHgDl~~~NILv~~~~~~~~~ 836 (976)
.... . .+ ..+.......+...+ ..+... .+...+++++|||++++||+++++
T Consensus 153 ~~~~---~-~~-------~~l~~~~~~~l~~~~----~~l~~~-------~~~~~~~~l~HgD~~~~Nvl~~~~------ 204 (307)
T TIGR00938 153 EKCF---E-AA-------PQLEAHMGAELDKEL----DYLDKF-------WPRDLPRGVIHADLFPDNVLFDGD------ 204 (307)
T ss_pred Hhhh---h-cc-------cccCHHHHHHHHHHH----HHHHhh-------hhhcCCCccCCCCCCcCcEEEECC------
Confidence 4211 1 00 012222222222222 011010 011357899999999999999752
Q ss_pred CCCCCCCCCccCCCCCCCCccCcCccceeeEEEeCCCCCCCCcccchhhhccccc---CC--ChHHHHHHHHhcCC
Q 002043 837 NGNAADTGPMVNGSINGYDEFGEAKSWHCSHIIDFSNLSIGDPIYDVIPIHLDIF---RG--DSSLFKQFLESYKL 907 (976)
Q Consensus 837 ~~~~~~~~~~~~~~~~~~dg~~~~~~w~~sGIIDFgd~~iGDP~~Dlv~l~l~~f---~g--d~~l~~~fl~~Y~~ 907 (976)
.++|||||+++.+|+|++||+.+..... .+ +....++|+++|..
T Consensus 205 ---------------------------~~~~vIDfd~~~~~~~~~DLA~~~~~~~~~~~~~~~~~~~~~~l~gY~~ 253 (307)
T TIGR00938 205 ---------------------------SVKGVIDFYFACTDARAYDLAITVNAWCFDADDHFDADHAKALIKGYHQ 253 (307)
T ss_pred ---------------------------ceEEEeecccccCcchHHHHHHHHHHHHcCCCCCCCHHHHHHHHHHHHh
Confidence 4789999999999999999987643221 12 35688999999973
No 19
>COG2850 Uncharacterized conserved protein [Function unknown]
Probab=99.51 E-value=3.1e-14 Score=157.07 Aligned_cols=196 Identities=17% Similarity=0.247 Sum_probs=125.8
Q ss_pred CCCCHHHHHHHh-ccCCccccccccCCcCCCCCCHHHHHHHhCCeeEEEE---ecCC---ceEEeeHHHHHHHHhhcCCC
Q 002043 136 KIVTREEFDREC-AEEPILLSGLADTWPARNTWTIDQLLTRYGDTAFRIS---QRSV---RSISMKFKDYVAYMNVQHDE 208 (976)
Q Consensus 136 ~~lS~eeF~~~Y-~~kPVII~g~~~~WpA~~~Wt~eyL~e~~Gd~~V~V~---~~s~---~~~~m~l~dfl~~~~~~~d~ 208 (976)
..+|+++|++.| .+||+||+|+..+. ...-+++.|.+.+-...|... ..+. +...-+|.++=-+ ... ..
T Consensus 13 ~glt~~~FL~~YWqkKPlliR~a~p~~--~~p~~pdeLa~La~~edV~srLV~~~~~~~w~~~~gPfe~~d~~-~~p-~~ 88 (383)
T COG2850 13 LGLTPEDFLRDYWQKKPLLIRNAFPEF--HSPLSPDELAGLAQEEDVTSRLVSHESDGTWQVSHGPFEEEDFL-GLP-RN 88 (383)
T ss_pred CCCCHHHHHHHHhhhcchHHhhccccc--ccCCCHHHHHHHhccccccchhhhhccCCceeEeeCccchhccc-cCC-cC
Confidence 479999999999 99999999998763 345667778888776554421 1111 1122223222111 110 11
Q ss_pred CCeeEec-cccccchhhhhhccC-CCCccccchhcccCCCCCCCcceEEeecCCCCCcccccCCCCcccEEEEEEEEEEE
Q 002043 209 DPLYIFD-YKFGENAQGLLEDYR-VPDLFQEDLFNVLDGDMRPSYRWVIIGPQRSGASWHVDPALTSAWNTLLCGRKRWA 286 (976)
Q Consensus 209 ~plYL~d-~~f~e~~P~L~~Dy~-vP~~f~eDlf~~l~~~~rp~~rwL~iGp~gSgT~lH~Dp~~t~awn~qI~GrKrW~ 286 (976)
..+-+.. .++......|.+.|+ +|..-.+ ...+...++|++...|+|.+++ +.+|.+|+|||.
T Consensus 89 wsllvq~vd~w~p~v~~l~~~FrflP~wr~d-------------diMIS~a~~GGgvg~H~D~YDV--fliQg~G~RRW~ 153 (383)
T COG2850 89 WSLLVQAVDHWHPEVAALMEPFRFLPDWRID-------------DIMISFAAPGGGVGPHFDQYDV--FLIQGQGRRRWR 153 (383)
T ss_pred ceEEEehhhhcCHHHHHHHHHhccCcccccc-------------ceEEEEecCCCccCccccchhe--eEEeecccceee
Confidence 1222211 122233445666565 4443222 2356678889999999999965 999999999999
Q ss_pred EeCCCCCCCcceeeecCCCCCccccCCcchhhhhhhCCCCCCCCCCEEEEEcCCCEEEeCCCCceeeEecCCcEEEeecc
Q 002043 287 LYPPGRVPLGVTVHVNEDDGDVNIETPSSLEWWLDFYPLLADDDKPIECTQLPGETIVVPSGWWHCILNLETTIAVTQNF 366 (976)
Q Consensus 287 LfPP~~~p~~v~~~~~~~~s~vd~~~Pdsl~W~l~~yP~l~~~~~~~e~vL~PGDvLfVP~GWWH~V~NLd~SISVt~NF 366 (976)
+-.+......++ ++ +..+..|- ....+.+++|||+||||+||||.-+..++|...++-|
T Consensus 154 v~~~~~~~~~~~-~~-----d~~~~~~f---------------~~~~d~vlepGDiLYiPp~~~H~gvae~dc~tySvG~ 212 (383)
T COG2850 154 VGKKCNMSTLCP-HP-----DLLILAPF---------------EPDIDEVLEPGDILYIPPGFPHYGVAEDDCMTYSVGF 212 (383)
T ss_pred cCCcccccCcCC-Cc-----chhhcCCC---------------CchhhhhcCCCceeecCCCCCcCCcccccccceeeec
Confidence 988865433222 11 11111111 2346788999999999999999999999999999999
Q ss_pred cCCCC
Q 002043 367 VDSKN 371 (976)
Q Consensus 367 v~~~n 371 (976)
..++-
T Consensus 213 r~Pn~ 217 (383)
T COG2850 213 RAPNT 217 (383)
T ss_pred cCCcH
Confidence 98754
No 20
>PRK11768 serine/threonine protein kinase; Provisional
Probab=99.41 E-value=6e-12 Score=141.69 Aligned_cols=235 Identities=14% Similarity=0.109 Sum_probs=135.9
Q ss_pred HHHHHhhCCCCCCccccccccCCCCcceEEec-----ceEEEEeecCCcccccccchhHHHHHHHHHhhCCCCCcccccc
Q 002043 524 LEEICNFHKLPTLTAEEKLPVGNGSNPVYLMA-----DCVVKIFVEGGFESSIYGLGTELEFYSLLAKVNSPLKNYIPDV 598 (976)
Q Consensus 524 ~~~~~~~~~l~~~~~~~~~~~~~gs~pv~~v~-----~~v~K~~~~~~~~~s~~~~~~e~~~y~~l~~~~~~l~~~~P~~ 598 (976)
+.++|...|+... ..-++++++-|-||.|. .+|||++-.+. .+...+..|++|-.-|++.+ ++++.| +
T Consensus 16 ~~~a~~~~g~~~~--~~~~~l~s~eN~vy~v~~~~~~~~vlKv~r~~~--~~~~~i~~E~~~l~~L~~~g--ipv~~p-~ 88 (325)
T PRK11768 16 ILDALESLGLRVD--GRLLALNSYENRVYQFGDEDGRRVVAKFYRPER--WSDAQILEEHAFALELAEAE--IPVVAP-L 88 (325)
T ss_pred HHHHHHHcCCCCc--cceEeeccccceEEEEecCCCCEEEEEEcCccc--CCHHHHHHHHHHHHHHHHCC--CCCCCC-c
Confidence 4566777788642 23457899999999996 49999996332 23344668999888886533 334444 3
Q ss_pred eeccceeecCCcceeccCCCCCcccccccccccccccccCCCccccccccccccccccccccccCCCCCCCCCccEEEEe
Q 002043 599 LASGILYVENGSYTIVPWDGKGVLDVIGKCNLTLLNCKQEEFPFGIWSKKQFEYRSAWMSVSKLSTSDGCNRIWPYIITK 678 (976)
Q Consensus 599 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~WpYiVm~ 678 (976)
-..|... . ...+++|.|++
T Consensus 89 ~~~G~~~------~-------------------------------------------------------~~~g~~~~l~~ 107 (325)
T PRK11768 89 AFNGQTL------H-------------------------------------------------------EHQGFRFALFP 107 (325)
T ss_pred cCCCCEE------E-------------------------------------------------------EECCEEEEEEe
Confidence 2233211 0 00126899999
Q ss_pred cccCccchhhhhcCCHHHHHHHHHHHHHHHHHhhCCCCCCCCCCccccccCCCCCCCCCcccccccCCCCchhHHHHHHH
Q 002043 679 RCKGKMFAQLRDALSGEDVLNLASFLGEQLRNLHLLPCPPFNESSLSDKLKTEPPFNNGFVEDVVDTSSVPAEWEIFIRT 758 (976)
Q Consensus 679 rl~G~~l~~v~~~Ls~ed~~~La~~LG~~L~~LHsip~p~~~~~~~~d~~~~g~~~~~~~~~~~~~~~~~~~~W~~~~~~ 758 (976)
|++|...... +. ....+||++|++||.+.... +.. .+ ...+++.+...
T Consensus 108 ~~~G~~~~~~----~~----~~~~~lG~~LarlH~~~~~~-~~~-~r----------------------~~~~~~~~~~~ 155 (325)
T PRK11768 108 RRGGRAPELD----NL----DQLEWVGRFLGRIHQVGAKR-PFE-HR----------------------PTLDLQEYGIE 155 (325)
T ss_pred eeCCCCCCCC----CH----HHHHHHHHHHHHHHhhccCC-CCC-CC----------------------CcCCHHHHHHH
Confidence 9999876531 22 23578999999999986531 110 00 00111122111
Q ss_pred HHHHHHHHHHHhhhcCCCCCHHHHHHHhhhCChhHHHHhhhhhhccCCccCCCCCeEEecCCCCCCeEEccCCcccCCCC
Q 002043 759 LARKKKNLVNRLTAWGHPIPKALIDKVDEYIPDDFVKLLDIYQDENGLNKVCKPCSWIHSDIMDDNVYMEPCCASSRSNG 838 (976)
Q Consensus 759 l~~r~~~~~~~~~~wg~~lp~~l~e~l~~ylp~d~~~ll~~~~~e~~~~~~~~~pv~iHgDl~~~NILv~~~~~~~~~~~ 838 (976)
.. .. +.. ...+|..+...+.+.+..-...+-..+. ....+..+||||+|++|||+++
T Consensus 156 ~~---~~----l~~-~~~~~~~~~~~~~~~~~~l~~~~~~~~~------~~~~~~~liHgD~h~~NvL~~d--------- 212 (325)
T PRK11768 156 PR---DW----LLA-SDLIPSDLRPAYLAAADQLLAAVEACWA------RGDVRLLRLHGDCHPGNILWRD--------- 212 (325)
T ss_pred HH---HH----HHh-CCCCCHHHHHHHHHHHHHHHHHHHHHHh------cCCCCccceecCCCchhccccC---------
Confidence 11 11 110 1234544333322222110111111110 0124778999999999999942
Q ss_pred CCCCCCCccCCCCCCCCccCcCccceeeEEEeCCCCCCCCcccchhhhcccccCCChHHHHHHHHhcCC
Q 002043 839 NAADTGPMVNGSINGYDEFGEAKSWHCSHIIDFSNLSIGDPIYDVIPIHLDIFRGDSSLFKQFLESYKL 907 (976)
Q Consensus 839 ~~~~~~~~~~~~~~~~dg~~~~~~w~~sGIIDFgd~~iGDP~~Dlv~l~l~~f~gd~~l~~~fl~~Y~~ 907 (976)
-.+||||+++..|.+++||..+....-......+++|++||..
T Consensus 213 --------------------------~~~iIDFDd~~~g~~i~DLa~~l~~~~~~~~~~~~~~l~GY~~ 255 (325)
T PRK11768 213 --------------------------GPHFVDLDDARMGPAVQDLWMLLSGDRAEQLMQLETLLEGYEE 255 (325)
T ss_pred --------------------------CcEEEeCCCCCCCCHHHHHHHHhccCcchhHHHHHHHHHHhhc
Confidence 1489999999999999999765322222223678899999985
No 21
>cd05151 ChoK Choline Kinase (ChoK). The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC), and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. Bacterial ChoK is also referred to as licA protein. ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major ph
Probab=99.41 E-value=2.3e-12 Score=129.32 Aligned_cols=63 Identities=17% Similarity=0.300 Sum_probs=50.9
Q ss_pred CCeEEecCCCCCCeEEccCCcccCCCCCCCCCCCccCCCCCCCCccCcCccceeeEEEeCCCCCCCCcccchhhhccccc
Q 002043 812 PCSWIHSDIMDDNVYMEPCCASSRSNGNAADTGPMVNGSINGYDEFGEAKSWHCSHIIDFSNLSIGDPIYDVIPIHLDIF 891 (976)
Q Consensus 812 ~pv~iHgDl~~~NILv~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~~~~~~w~~sGIIDFgd~~iGDP~~Dlv~l~l~~f 891 (976)
+++++|||++++||++++. ++ .|||||.+.+|||++|++.++.. +
T Consensus 106 ~~~~~HgD~~~~Nil~~~~---------------------------------~~-~liDf~~a~~~~~~~Dla~~~~~-~ 150 (170)
T cd05151 106 DLVPCHNDLLPGNFLLDDG---------------------------------RL-WLIDWEYAGMNDPLFDLANFFSE-A 150 (170)
T ss_pred CceeecCCCCcCcEEEECC---------------------------------eE-EEEecccccCCChHHHHHHHHHh-c
Confidence 3688999999999999731 34 69999999999999999876433 4
Q ss_pred CCChHHHHHHHHhcCCcc
Q 002043 892 RGDSSLFKQFLESYKLPL 909 (976)
Q Consensus 892 ~gd~~l~~~fl~~Y~~~~ 909 (976)
.-++...+.|++.|+..+
T Consensus 151 ~~~~~~~~~~~~~y~~~~ 168 (170)
T cd05151 151 KLSEDQEEELLEAYFGRE 168 (170)
T ss_pred CCCHHHHHHHHHHHhCCC
Confidence 556677889999998654
No 22
>COG3001 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=99.39 E-value=1.5e-11 Score=129.67 Aligned_cols=265 Identities=20% Similarity=0.280 Sum_probs=163.4
Q ss_pred hHHHHHHHHhhCCCCCCccccccccCCCCcceEEecceEEEEeecCCcccccccchhHHHHHHHHHhhCCCCCcccccce
Q 002043 520 WLELLEEICNFHKLPTLTAEEKLPVGNGSNPVYLMADCVVKIFVEGGFESSIYGLGTELEFYSLLAKVNSPLKNYIPDVL 599 (976)
Q Consensus 520 w~~~~~~~~~~~~l~~~~~~~~~~~~~gs~pv~~v~~~v~K~~~~~~~~~s~~~~~~e~~~y~~l~~~~~~l~~~~P~~~ 599 (976)
|....+.++...|.+...+.++++ |+--|--|.|.+-.-++|+.-...--......|+.=..+|++++. +.+|+|+
T Consensus 2 w~~i~~qlse~~g~~~i~er~~v~-gG~inea~~v~dg~~~~FvK~n~~~~~~~f~AEa~gL~~la~s~t---i~VP~vi 77 (286)
T COG3001 2 WQAISQQLSEQLGEGEIKEREEVS-GGDINEAWRLRDGTDPFFVKCNQREQLSMFTAEADGLELLARSNT---ITVPKVI 77 (286)
T ss_pred hHHHHHHHHHHhCchhhhcccccC-CccccceeEeecCCcceEEEecchhhHHHHHHHHHHHHHHHhcCC---ccccceE
Confidence 677778889999998766666666 555999999996666666633222212234466666677888887 8999999
Q ss_pred eccceeecCCcceeccCCCCCcccccccccccccccccCCCccccccccccccccccccccccCCCCCCCCCccEEEEec
Q 002043 600 ASGILYVENGSYTIVPWDGKGVLDVIGKCNLTLLNCKQEEFPFGIWSKKQFEYRSAWMSVSKLSTSDGCNRIWPYIITKR 679 (976)
Q Consensus 600 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~WpYiVm~r 679 (976)
+.|... + -.|+||+|
T Consensus 78 ~~G~~~---------------------------------------------~--------------------~sylVle~ 92 (286)
T COG3001 78 AVGASR---------------------------------------------D--------------------HSYLVLEY 92 (286)
T ss_pred EecCCC---------------------------------------------C--------------------eeEEEEee
Confidence 998654 2 46999999
Q ss_pred ccCccchhhhhcCCHHHHHHHHHHHHHHHHHhhCCCCCCCCCCccccccCCCCCCCCCcccccccC---CCCchhHHHHH
Q 002043 680 CKGKMFAQLRDALSGEDVLNLASFLGEQLRNLHLLPCPPFNESSLSDKLKTEPPFNNGFVEDVVDT---SSVPAEWEIFI 756 (976)
Q Consensus 680 l~G~~l~~v~~~Ls~ed~~~La~~LG~~L~~LHsip~p~~~~~~~~d~~~~g~~~~~~~~~~~~~~---~~~~~~W~~~~ 756 (976)
++=.++.. .-+.++|+.|++||+...+.-.+. .+.+ .++.. -.-...|..|+
T Consensus 93 L~~~~~d~-----------~~~~~~GqqLA~LH~~~~~~~fG~----------d~dn----~iG~t~QpN~W~~~Wa~Ff 147 (286)
T COG3001 93 LPTGPLDA-----------HSAFILGQQLARLHQWGGQAQFGL----------DFDN----YIGTTPQPNTWQRRWATFF 147 (286)
T ss_pred ccCCCCCc-----------hhHHHHHHHHHHHHhhcCccccCc----------cccc----ccCCCCCCCCCcchHHHHH
Confidence 99876652 225779999999999866542211 1110 11111 11346799998
Q ss_pred HHHHHHHHHHHHHhhhcCCCCC--HHHHHHHhhhCChhHHHHhhhhhhccCCccCCCCCeEEecCCCCCCeEEccCCccc
Q 002043 757 RTLARKKKNLVNRLTAWGHPIP--KALIDKVDEYIPDDFVKLLDIYQDENGLNKVCKPCSWIHSDIMDDNVYMEPCCASS 834 (976)
Q Consensus 757 ~~l~~r~~~~~~~~~~wg~~lp--~~l~e~l~~ylp~d~~~ll~~~~~e~~~~~~~~~pv~iHgDl~~~NILv~~~~~~~ 834 (976)
...+ ..-.++..++-|...+ .++.++|.+.+ .. ....|+++|||||.+|...-.
T Consensus 148 aeqR--ig~qlqlar~rg~~f~did~~~~~v~elL--------~~---------hqpqPsLlHGDLW~gN~a~~~----- 203 (286)
T COG3001 148 AEQR--IGWQLQLARERGLTFGDIDAIVEKIQELL--------AD---------HQPQPSLLHGDLWSGNCAFGK----- 203 (286)
T ss_pred HHhh--hhHHHHHHHHhCCCccCHHHHHHHHHHHH--------hc---------CCCCcceeecccccccccccC-----
Confidence 7422 2222233333232222 12222222222 21 135799999999999998853
Q ss_pred CCCCCCCCCCCccCCCCCCCCccCcCccceeeEEEeCCCCCCCCcccchhhhcccccCCChHHHHHHHHhcCCccccccc
Q 002043 835 RSNGNAADTGPMVNGSINGYDEFGEAKSWHCSHIIDFSNLSIGDPIYDVIPIHLDIFRGDSSLFKQFLESYKLPLVRRMQ 914 (976)
Q Consensus 835 ~~~~~~~~~~~~~~~~~~~~dg~~~~~~w~~sGIIDFgd~~iGDP~~Dlv~l~l~~f~gd~~l~~~fl~~Y~~~~~~~~~ 914 (976)
|| + -||| =-+.+|||.||++.+ .+|.|=+ .+|.+||..-+.-.
T Consensus 204 --------------------~G--------P-v~fD-PA~y~GDrE~Dlam~--elFggfp---~efy~gY~sv~PL~-- 246 (286)
T COG3001 204 --------------------DG--------P-VIFD-PACYWGDRECDLAML--ELFGGFP---PEFYDGYQSVSPLP-- 246 (286)
T ss_pred --------------------CC--------C-eeec-cccccCCcccceehh--hhhcCCc---HHHHHhhhccCCCC--
Confidence 21 1 4666 456789999999876 5676644 48888888532111
Q ss_pred cCCCCCCchhhHHHHHHHHhhhcccChhhHH
Q 002043 915 QHGSGGGKFSRLSYHAMCYCILHDDNVLGTI 945 (976)
Q Consensus 915 ~~~~~~~~~~~~~~r~m~y~ilh~~~~l~~~ 945 (976)
-+-.-|...|++ |.||.+.+-++-.
T Consensus 247 ----~G~~eRk~iYqL--Y~llnh~~~FGg~ 271 (286)
T COG3001 247 ----AGYLERKPIYQL--YHLLNHANLFGGH 271 (286)
T ss_pred ----CchHHHhHHHHH--HHHHHHHHHhCcH
Confidence 011124456665 6777777766644
No 23
>COG2334 Putative homoserine kinase type II (protein kinase fold) [General function prediction only]
Probab=99.38 E-value=1.9e-11 Score=137.72 Aligned_cols=237 Identities=22% Similarity=0.252 Sum_probs=138.7
Q ss_pred HHHHHhhCCCCCCccccccccCCCCcceEEec----ceEEEEeecCCcccccccchhHHHHHHHHHhhCCCCCcccccce
Q 002043 524 LEEICNFHKLPTLTAEEKLPVGNGSNPVYLMA----DCVVKIFVEGGFESSIYGLGTELEFYSLLAKVNSPLKNYIPDVL 599 (976)
Q Consensus 524 ~~~~~~~~~l~~~~~~~~~~~~~gs~pv~~v~----~~v~K~~~~~~~~~s~~~~~~e~~~y~~l~~~~~~l~~~~P~~~ 599 (976)
+..+....++.....-..+ .+..|-||.|. .+||||+..+ +.+ --+.-|++|-.-|++.+-+++.|+|.+
T Consensus 16 ~~~~l~~~~~g~~~~~~~l--~s~eN~~f~~~~~~g~~iLki~~~~--~~~-~~i~~el~~l~~La~~~i~v~~Pl~~~- 89 (331)
T COG2334 16 AAAALEAYHYGLDGSLRGL--NSEENSNFRVQTEDGRYILKIYRPG--WTR-AEIPFELALLQHLAERGIPVPAPLPSL- 89 (331)
T ss_pred HHHHHHhcCcCcccccccc--ccccCceEEEEecCCCeEEEEecCC--CCH-HHHHHHHHHHHHHHHcCCCCCCCccCC-
Confidence 3455556666654444444 45999999998 8999999966 211 235578888888877666655554432
Q ss_pred eccceeecCCcceeccCCCCCcccccccccccccccccCCCccccccccccccccccccccccCCCCCCCCCccEEEEec
Q 002043 600 ASGILYVENGSYTIVPWDGKGVLDVIGKCNLTLLNCKQEEFPFGIWSKKQFEYRSAWMSVSKLSTSDGCNRIWPYIITKR 679 (976)
Q Consensus 600 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~WpYiVm~r 679 (976)
+|..- + .++.+ ++++.|.+|
T Consensus 90 -dG~~l---------------------------------------------~-------------~~~~~-~r~a~lf~~ 109 (331)
T COG2334 90 -DGELL---------------------------------------------E-------------ALSGG-PRPAALFEY 109 (331)
T ss_pred -Ccchh---------------------------------------------h-------------hccCC-ceeEEEEEe
Confidence 22110 0 11122 799999999
Q ss_pred ccCccchhhhhcCCHHHHHHHHHHHHHHHHHhhCCCCCCCCCCccccccCCCCCCCCCcccccccCCCCchhHHHHHHHH
Q 002043 680 CKGKMFAQLRDALSGEDVLNLASFLGEQLRNLHLLPCPPFNESSLSDKLKTEPPFNNGFVEDVVDTSSVPAEWEIFIRTL 759 (976)
Q Consensus 680 l~G~~l~~v~~~Ls~ed~~~La~~LG~~L~~LHsip~p~~~~~~~~d~~~~g~~~~~~~~~~~~~~~~~~~~W~~~~~~l 759 (976)
++|..+.+ ..+.++-.. +|++|.+||+.-- ++.-. .++ ......|.. ....
T Consensus 110 l~G~~~~~---~~~~~~~~~----lG~~LgrlH~a~~-~f~~~--------~p~------------~~~~~~w~~-~~~~ 160 (331)
T COG2334 110 LPGRPLER---DDNAEQLEE----LGRMLGRLHLALR-GFPFE--------RPN------------ALRRLEWDI-LEPR 160 (331)
T ss_pred cCCcCcCC---CCcHHHHHH----HHHHHHHHHHHhC-cCCcc--------CCC------------cccccchhh-hcch
Confidence 99999985 345555444 6666666665421 11100 000 001345653 1111
Q ss_pred HHHHHHHHHHhhhcCCCCCHHHHHHHhhhCChhHHHHhhhhhhccCCccCCCC---CeEEecCCCCCCeEEccCCcccCC
Q 002043 760 ARKKKNLVNRLTAWGHPIPKALIDKVDEYIPDDFVKLLDIYQDENGLNKVCKP---CSWIHSDIMDDNVYMEPCCASSRS 836 (976)
Q Consensus 760 ~~r~~~~~~~~~~wg~~lp~~l~e~l~~ylp~d~~~ll~~~~~e~~~~~~~~~---pv~iHgDl~~~NILv~~~~~~~~~ 836 (976)
...+.. ...+..+...+...+ ..+...+.. ..| .-.||+|++++||++++++
T Consensus 161 ~~~~~~---------~~~~~~l~a~~~~~~----~~~~~~~~~-------~lp~~~~~iIH~D~~~~NVl~d~~~----- 215 (331)
T COG2334 161 ALLRLD---------LVEPEDLRAALLAAL----DRLLARLPA-------HLPALGDQIIHGDLHPDNVLFDDDT----- 215 (331)
T ss_pred hhhhhc---------ccCchhhHHHHHHHH----HHHHhhchh-------hCCcccceeeecCCCccceeEcCCC-----
Confidence 110010 122333333333333 111111110 122 3389999999999998632
Q ss_pred CCCCCCCCCccCCCCCCCCccCcCccceeeEEEeCCCCCCCCcccchhhhc---ccccCCChHHHHHHHHhcCC
Q 002043 837 NGNAADTGPMVNGSINGYDEFGEAKSWHCSHIIDFSNLSIGDPIYDVIPIH---LDIFRGDSSLFKQFLESYKL 907 (976)
Q Consensus 837 ~~~~~~~~~~~~~~~~~~dg~~~~~~w~~sGIIDFgd~~iGDP~~Dlv~l~---l~~f~gd~~l~~~fl~~Y~~ 907 (976)
.++|+|||+|+..|--+||++.+. ..-+..++...++|++||.-
T Consensus 216 ---------------------------~~~g~iDFdDa~~~~~i~DlAi~l~~~~~d~~~~~~~~~a~l~GY~~ 262 (331)
T COG2334 216 ---------------------------DVSGFIDFDDAGYGWFIYDLAIALNAWNGDEADPRAAIAAFLEGYEE 262 (331)
T ss_pred ---------------------------CeeeEEEccccccchHHHHHHHHHHHhhcCCCCcHHHHHHHHHHHHh
Confidence 289999999999999999998764 22244455889999999984
No 24
>PF03881 Fructosamin_kin: Fructosamine kinase; InterPro: IPR016477 Ketosamines derive from a non-enzymatic reaction between a sugar and a protein []. Ketosamine-3-kinases (KT3K), of which fructosamine-3-kinase (FN3K) is the best-known example, catalyse the phosphorylation of the ketosamine moiety of glycated proteins. The instability of a phosphorylated ketosamine leads to its degradation, and KT3K is thus thought to be involved in protein repair []. The function of the prokaryotic members of this group has not been established. However, several lines of evidence indicate that they may function as fructosamine-3-kinases (FN3K). First, they are similar to characterised FN3K from mouse and human. Second, the Escherichia coli members are found in close proximity on the genome to fructose-6-phosphate kinase (PfkB). Last, FN3K activity has been found in a Anacystis montana (Gloeocapsa montana Kutzing 1843) [], indicating such activity-directly demonstrated in eukaryotes-is nonetheless not confined to eukaryotes. This family includes eukaryotic fructosamine-3-kinase enzymes [] which may initiate a process leading to the deglycation of fructoselysine and of glycated proteins and in the phosphorylation of 1-deoxy-1-morpholinofructose, fructoselysine, fructoseglycine, fructose and glycated lysozyme. The family also includes bacterial members that have not been characterised but probably have a similar or identical function. For additional information please see [].; PDB: 3JR1_B 3F7W_A.
Probab=99.36 E-value=7.7e-12 Score=138.53 Aligned_cols=233 Identities=21% Similarity=0.280 Sum_probs=121.8
Q ss_pred hHHHHHHHHhhCCCCC-CccccccccCCC-CcceEEec----ceEEEEeecCCcccccccchhHHHHHHHHHhhCCCCCc
Q 002043 520 WLELLEEICNFHKLPT-LTAEEKLPVGNG-SNPVYLMA----DCVVKIFVEGGFESSIYGLGTELEFYSLLAKVNSPLKN 593 (976)
Q Consensus 520 w~~~~~~~~~~~~l~~-~~~~~~~~~~~g-s~pv~~v~----~~v~K~~~~~~~~~s~~~~~~e~~~y~~l~~~~~~l~~ 593 (976)
|....+.|++..|.+. ++..+ ||++| -|-+|.+. .+.||+-.+.+. ..+..|.+=.+.|++++. .
T Consensus 2 w~~i~~~~~~~~~~~~~i~~~~--~v~GG~i~~a~~~~~~~~~~FvK~~~~~~~----~~f~~Ea~gL~~L~~~~~---~ 72 (288)
T PF03881_consen 2 WQAIEQQISEQLGADFKITSIE--PVSGGDINEAYRLDTDGGSYFVKVNSESGR----DMFEGEAEGLKALAEANP---I 72 (288)
T ss_dssp HHHHHHHHHHHHTS-----EEE--EE--SSSSEEEEEETTS-EEEEEEEEGGGC----CHHHHHHHHHHHHCHTTT---S
T ss_pred hHHHHHHHHHHhCCCCceeeeE--ecCCCChhheEEEECCCccEEEEecChhhH----HHHHHHHHHHHHHHhcCC---C
Confidence 6677788888888873 33333 55666 89999998 899999883322 224467765556655444 8
Q ss_pred ccccceeccceeecCCcceeccCCCCCcccccccccccccccccCCCccccccccccccccccccccccCCCCCCCCCcc
Q 002043 594 YIPDVLASGILYVENGSYTIVPWDGKGVLDVIGKCNLTLLNCKQEEFPFGIWSKKQFEYRSAWMSVSKLSTSDGCNRIWP 673 (976)
Q Consensus 594 ~~P~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~Wp 673 (976)
.+|+|++.|... + -+
T Consensus 73 ~vP~vi~~G~~~---------------------------------------------~--------------------~~ 87 (288)
T PF03881_consen 73 RVPKVIAWGEYD---------------------------------------------D--------------------DA 87 (288)
T ss_dssp BS--EEEEEE-S---------------------------------------------S--------------------CC
T ss_pred CCCeEEEEEeec---------------------------------------------C--------------------Cc
Confidence 899999997543 1 14
Q ss_pred EEEEecccCccchhhhhcCCHHHHHHHHHHHHHHHHHhhC-CCCCCCCCCccccccCCCCCCCCCcccccccCCCCchhH
Q 002043 674 YIITKRCKGKMFAQLRDALSGEDVLNLASFLGEQLRNLHL-LPCPPFNESSLSDKLKTEPPFNNGFVEDVVDTSSVPAEW 752 (976)
Q Consensus 674 YiVm~rl~G~~l~~v~~~Ls~ed~~~La~~LG~~L~~LHs-ip~p~~~~~~~~d~~~~g~~~~~~~~~~~~~~~~~~~~W 752 (976)
|+||+|++..... . .-...||+.|++||+ -+.+.++-. .| .+.....-......+|
T Consensus 88 fLlle~l~~~~~~-------~----~~~~~lg~~LA~LH~~~~~~~FGf~--~~----------~~~G~~~q~N~w~~~W 144 (288)
T PF03881_consen 88 FLLLEFLEMGSPS-------P----PDWEELGRQLAALHQWSPAGKFGFP--VD----------TYIGSLPQPNTWTDSW 144 (288)
T ss_dssp EEEEE---------------C----CHHHHHHHHHHHHHH-T--SSBB-S--S-----------EEETTEEE----BS-H
T ss_pred eEEEEeecCCCCC-------c----hhHHHHHHHHHHHhhhcCCCCcCCC--cC----------CcccCcCCCCCCCCCH
Confidence 9999999887221 1 113568999999999 555555532 00 0000000001134789
Q ss_pred HHHHHHHHHHHHHHHHHhhhcCCCCC--HHHHHHHhhhCChhHHHHhhhhhhccCCccCCCCCeEEecCCCCCCeEEccC
Q 002043 753 EIFIRTLARKKKNLVNRLTAWGHPIP--KALIDKVDEYIPDDFVKLLDIYQDENGLNKVCKPCSWIHSDIMDDNVYMEPC 830 (976)
Q Consensus 753 ~~~~~~l~~r~~~~~~~~~~wg~~lp--~~l~e~l~~ylp~d~~~ll~~~~~e~~~~~~~~~pv~iHgDl~~~NILv~~~ 830 (976)
.+|+.. +|-.-.++...+.|...+ ..+++++.+.++. ...+||+||||||.||++++..
T Consensus 145 ~~Ff~~--~RL~~~l~~~~~~~~~~~~~~~l~~~~~~~l~~-----------------~~~~PsLlHGDLW~GN~~~~~~ 205 (288)
T PF03881_consen 145 EEFFAE--QRLRPQLELAREKGGLDAELERLVERLPSLLPG-----------------REPKPSLLHGDLWSGNVGFDAD 205 (288)
T ss_dssp HHHHHH--HCCHHHHHHHHHCTSS-CHHHHHHHHHHHCCTT-----------------S----EEE-SS-SGGGEEEETT
T ss_pred HHHHHH--HHHHHHHHHHHhhCCchhHHHHHHHHHHHHhcC-----------------CCCCceeeEcCccccceeecCC
Confidence 999974 222445555555442211 0222222222211 1357999999999999999752
Q ss_pred CcccCCCCCCCCCCCccCCCCCCCCccCcCccceeeEEEeCCCCCCCCcccchhhhcccccCCChHHHHHHHHhcCC
Q 002043 831 CASSRSNGNAADTGPMVNGSINGYDEFGEAKSWHCSHIIDFSNLSIGDPIYDVIPIHLDIFRGDSSLFKQFLESYKL 907 (976)
Q Consensus 831 ~~~~~~~~~~~~~~~~~~~~~~~~dg~~~~~~w~~sGIIDFgd~~iGDP~~Dlv~l~l~~f~gd~~l~~~fl~~Y~~ 907 (976)
| .--|||=. +.+||+.+||+.+ .+|.|=+ .+|+++|.-
T Consensus 206 -------------------------g--------~p~l~DPa-~yygh~E~DLam~--~lfggf~---~~f~~~Y~~ 243 (288)
T PF03881_consen 206 -------------------------G--------EPVLFDPA-CYYGHREVDLAMT--RLFGGFP---DEFYDAYQE 243 (288)
T ss_dssp -------------------------E---------EEE-S----EEE-CHHHHHHH--CCCSTTH---HHHHHHHHH
T ss_pred -------------------------C--------Cceeeccc-cccCchHhhhhhh--hhhCCCC---HHHHHHHHh
Confidence 2 24799954 8899999999865 3566544 367777763
No 25
>cd05157 ETNK_euk Ethanolamine kinase (ETNK) in eukaryotes. ETNK is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major phospholipid, phosphatidylethanolamine (PtdEtn). Unlike ChoK, ETNK shows specific activity for its substrate, and displays negligible activity towards N-methylated derivatives of Etn. The Drosophila ETNK is implicated in development and neuronal function. Mammals contain two ETNK proteins, ETNK1 and ETNK2. ETNK1 selectively increases Etn uptake and phosphorylation, as well as PtdEtn synthesis. ETNK2 is found primarily in the liver and reproductive tissues. It plays a critical role in regulating placental hemostasis to support late embryo
Probab=99.34 E-value=1.2e-11 Score=131.65 Aligned_cols=46 Identities=15% Similarity=0.325 Sum_probs=39.1
Q ss_pred CCCeEEecCCCCCCeEEccCCcccCCCCCCCCCCCccCCCCCCCCccCcCccceeeEEEeCCCCCCCCcccchhhhcc
Q 002043 811 KPCSWIHSDIMDDNVYMEPCCASSRSNGNAADTGPMVNGSINGYDEFGEAKSWHCSHIIDFSNLSIGDPIYDVIPIHL 888 (976)
Q Consensus 811 ~~pv~iHgDl~~~NILv~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~~~~~~w~~sGIIDFgd~~iGDP~~Dlv~l~l 888 (976)
.+++++|||++++|||+++. + ...+||||+.+++|||++|++.+..
T Consensus 168 ~~~~l~H~Dl~~~Nil~~~~------------------------~--------~~~~lIDwe~a~~~~~~~Dla~~~~ 213 (235)
T cd05157 168 SPIVFCHNDLLSGNIIYNEE------------------------K--------NSVKFIDYEYAGYNYRAFDIANHFN 213 (235)
T ss_pred CCEEEEcCCCCcCcEEEeCC------------------------C--------CCEEEEEcccCCcCchheeHHHHHH
Confidence 57899999999999999751 1 2469999999999999999987643
No 26
>PF02373 JmjC: JmjC domain, hydroxylase; InterPro: IPR013129 Jumonji protein is required for neural tube formation in mice [].There is evidence of domain swapping within the jumonji family of transcription factors []. This domain is often associated with jmjN (see IPR003349 from INTERPRO) and belongs to the Cupin superfamily [].; PDB: 2YU2_A 2YU1_A 3AVR_A 3AVS_A 2OX0_B 2OQ6_B 2WWJ_A 2Q8D_A 3PDQ_A 2YBK_A ....
Probab=99.29 E-value=3.5e-13 Score=127.80 Aligned_cols=110 Identities=23% Similarity=0.371 Sum_probs=66.7
Q ss_pred eEEeecCCCCCcccccCCCCcc-cEEEEEEEEEEEEeCCCCCCCccee-eec--CCCCCccccCCcchhhhhhhCCCCCC
Q 002043 253 WVIIGPQRSGASWHVDPALTSA-WNTLLCGRKRWALYPPGRVPLGVTV-HVN--EDDGDVNIETPSSLEWWLDFYPLLAD 328 (976)
Q Consensus 253 wL~iGp~gSgT~lH~Dp~~t~a-wn~qI~GrKrW~LfPP~~~p~~v~~-~~~--~~~s~vd~~~Pdsl~W~l~~yP~l~~ 328 (976)
|++||+++|.|++|.|...+.+ ++....|.|.|.++||.+....... ... ...... ...-. ..+..+. ....
T Consensus 1 ~~~ig~~~s~t~~H~e~~~~~sv~~~~~g~~k~W~~v~~~~~~~~~~~~~~~~~~~~~~~-~~~~~-~~~~p~~--l~~~ 76 (114)
T PF02373_consen 1 WLYIGMKGSYTPWHIEDNGLSSVNYHHFGGSKVWYIVPPEDADKFEKFLRSKESQNCPQF-LDHKN-IFVSPEQ--LKKA 76 (114)
T ss_dssp EEEEE-TTEEEEEEE-GGG-EEEEEEEEESEEEEEEE-GGGHHHHHHHHHHHHHHHSTTG-GCTGG-EEEGHHH--HHHT
T ss_pred CEEEeCCCcCCCcEecCCCCceeeeeccCcceEeEEechhhhhhHHHHHhhccccccccc-ccccc-cccceee--eecc
Confidence 6899999999999999998874 6666778999999999875331100 000 000000 00000 0000111 0111
Q ss_pred CCCCEEEEEcCCCEEEeCCCCceeeEecCCcEEEeecc
Q 002043 329 DDKPIECTQLPGETIVVPSGWWHCILNLETTIAVTQNF 366 (976)
Q Consensus 329 ~~~~~e~vL~PGDvLfVP~GWWH~V~NLd~SISVt~NF 366 (976)
..+.++++|+|||+||||+||+|+|.|++.||++++||
T Consensus 77 gi~~~~~~Q~~Ge~V~i~pg~~H~v~n~g~~i~~a~Nf 114 (114)
T PF02373_consen 77 GIPVYRFVQKPGEFVFIPPGAYHQVFNLGDNISEAVNF 114 (114)
T ss_dssp TS--EEEEEETT-EEEE-TT-EEEEEESSSEEEEEEEE
T ss_pred CcccccceECCCCEEEECCCceEEEEeCCceEEEEecC
Confidence 13789999999999999999999999999999999998
No 27
>cd05156 ChoK_euk Choline Kinase (ChoK) in eukaryotes. The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC) and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. ChoK plays an important role in cell signaling pathways and the regulation of cell growth. Along with PCho, it is involved in malignant transformation through Ras oncogenes in various human cancer
Probab=99.29 E-value=6e-11 Score=131.36 Aligned_cols=48 Identities=19% Similarity=0.288 Sum_probs=38.3
Q ss_pred CCCCeEEecCCCCCCeEEccCCcccCCCCCCCCCCCccCCCCCCCCccCcCccceeeEEEeCCCCCCCCcccchhhh
Q 002043 810 CKPCSWIHSDIMDDNVYMEPCCASSRSNGNAADTGPMVNGSINGYDEFGEAKSWHCSHIIDFSNLSIGDPIYDVIPI 886 (976)
Q Consensus 810 ~~~pv~iHgDl~~~NILv~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~~~~~~w~~sGIIDFgd~~iGDP~~Dlv~l 886 (976)
..+.|++|+||+++|||++++. .+++ .+ .+|||+.+++|||++|++..
T Consensus 176 ~~~~~lcH~Dl~~~Nil~~~~~---------------------~~~~-------~i-~lIDwEya~~~~p~~DlA~~ 223 (302)
T cd05156 176 GSPVVFCHNDLQEGNILLLNPS---------------------SETK-------KL-VLIDFEYASYNYRGFDIANH 223 (302)
T ss_pred CCCceEEecCCCcCeEEecCCC---------------------CCCC-------cE-EEEeeCCCCCCCcHHHHHHH
Confidence 3688999999999999997520 0011 34 79999999999999999874
No 28
>PF08007 Cupin_4: Cupin superfamily protein; InterPro: IPR022777 This signature represents primarily the cupin fold found in JmjC transcription factors. The fold is also found in lysine-specific demethylase NO66.; PDB: 2XDV_A 1VRB_B 4DIQ_B.
Probab=99.24 E-value=1.5e-11 Score=138.25 Aligned_cols=104 Identities=26% Similarity=0.469 Sum_probs=68.4
Q ss_pred CcceEEeecCC-CCCcccccCCCCcccEEEEEEEEEEEEeCCCCCCCcceeeecCCCCCccccCCcchhhhhhhCCCCCC
Q 002043 250 SYRWVIIGPQR-SGASWHVDPALTSAWNTLLCGRKRWALYPPGRVPLGVTVHVNEDDGDVNIETPSSLEWWLDFYPLLAD 328 (976)
Q Consensus 250 ~~rwL~iGp~g-SgT~lH~Dp~~t~awn~qI~GrKrW~LfPP~~~p~~v~~~~~~~~s~vd~~~Pdsl~W~l~~yP~l~~ 328 (976)
...++|++|+| .+.+.|+|..+ ++.+|+.|+|+|.|++|...+.... +..++. .+..
T Consensus 114 ~~~n~Y~tp~g~~g~~~H~D~~d--vfvlQ~~G~K~W~l~~~~~~~~~~~-------~~~~~~-------------~~~~ 171 (319)
T PF08007_consen 114 VGANAYLTPPGSQGFGPHYDDHD--VFVLQLEGRKRWRLYPPPDEPAPLY-------SDQPFK-------------QLEE 171 (319)
T ss_dssp EEEEEEEETSSBEESECEE-SSE--EEEEEEES-EEEEEE-SCCCTTTSS-------CE--TT-------------TCG-
T ss_pred cceEEEecCCCCCCccCEECCcc--cEEEECCceeEEEECCCCccccccc-------CCCCcc-------------cccc
Confidence 44689999999 48899999985 5999999999999999543322111 111111 1111
Q ss_pred CCCCEEEEEcCCCEEEeCCCCceeeEecCCcEEEeecccCCCCHHHHH
Q 002043 329 DDKPIECTQLPGETIVVPSGWWHCILNLETTIAVTQNFVDSKNFEFVC 376 (976)
Q Consensus 329 ~~~~~e~vL~PGDvLfVP~GWWH~V~NLd~SISVt~NFv~~~nl~~vl 376 (976)
.....+++|+|||+||||+||||++.+.+.|+++|+.|..+ +...++
T Consensus 172 ~~~~~~~~L~pGD~LYlPrG~~H~~~~~~~S~hltv~~~~~-t~~dl~ 218 (319)
T PF08007_consen 172 FEPVEEVVLEPGDVLYLPRGWWHQAVTTDPSLHLTVGFRAP-TWADLL 218 (319)
T ss_dssp -STSEEEEE-TT-EEEE-TT-EEEEEESS-EEEEEEEECCE-BHHHHH
T ss_pred CceeEEEEECCCCEEEECCCccCCCCCCCCceEEEEeeeCC-chhhHH
Confidence 12568999999999999999999999999999999997765 444443
No 29
>PLN02236 choline kinase
Probab=99.20 E-value=3.9e-10 Score=128.11 Aligned_cols=90 Identities=14% Similarity=0.234 Sum_probs=58.7
Q ss_pred CCCCeEEecCCCCCCeEEccCCcccCCCCCCCCCCCccCCCCCCCCccCcCccceeeEEEeCCCCCCCCcccchhhhccc
Q 002043 810 CKPCSWIHSDIMDDNVYMEPCCASSRSNGNAADTGPMVNGSINGYDEFGEAKSWHCSHIIDFSNLSIGDPIYDVIPIHLD 889 (976)
Q Consensus 810 ~~~pv~iHgDl~~~NILv~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~~~~~~w~~sGIIDFgd~~iGDP~~Dlv~l~l~ 889 (976)
..+.|++|+|++++|||+++.. +...||||+.+++|||.+|++.....
T Consensus 197 ~~~~~~cH~Dl~~~Nil~~~~~--------------------------------~~~~lID~Eya~~~~~~~Dia~~~~e 244 (344)
T PLN02236 197 DQEIGFCHNDLQYGNIMIDEET--------------------------------RAITIIDYEYASYNPVAYDIANHFCE 244 (344)
T ss_pred CCCceEEeCCCCcCcEEEeCCC--------------------------------CcEEEEeehhccccchHHHHHHHHHH
Confidence 3578999999999999997521 35799999999999999999874321
Q ss_pred ccCC----------------ChHHHHHHHHhcCCccccccccCCCCCCchhhHHHHHHHHhhhc
Q 002043 890 IFRG----------------DSSLFKQFLESYKLPLVRRMQQHGSGGGKFSRLSYHAMCYCILH 937 (976)
Q Consensus 890 ~f~g----------------d~~l~~~fl~~Y~~~~~~~~~~~~~~~~~~~~~~~r~m~y~ilh 937 (976)
. .+ +.+..+.|++.|--..+.. ...+....+..++..|.++.
T Consensus 245 ~-~~~y~~~~~~~~~~~~~~~~~~~~~fi~~Yl~~~g~~-----~~~~~~~~l~~~v~~~~~~~ 302 (344)
T PLN02236 245 M-AADYHSETPHILDYSKYPGEEERRRFIRTYLSSSGEE-----PSDEEVEQLLDDVEKYTLAS 302 (344)
T ss_pred H-HHhhcCCCcccCchhhCcCHHHHHHHHHHHHhhcCCC-----chHHHHHHHHHHHHHHhhHh
Confidence 1 11 3455567777776321110 00111234666676776654
No 30
>PRK06148 hypothetical protein; Provisional
Probab=99.14 E-value=7.1e-10 Score=141.61 Aligned_cols=67 Identities=21% Similarity=0.217 Sum_probs=52.1
Q ss_pred CCCeEEecCCCCCCeEEccCCcccCCCCCCCCCCCccCCCCCCCCccCcCccceeeEEEeCCCCCCCCcccchhhh--cc
Q 002043 811 KPCSWIHSDIMDDNVYMEPCCASSRSNGNAADTGPMVNGSINGYDEFGEAKSWHCSHIIDFSNLSIGDPIYDVIPI--HL 888 (976)
Q Consensus 811 ~~pv~iHgDl~~~NILv~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~~~~~~w~~sGIIDFgd~~iGDP~~Dlv~l--~l 888 (976)
.|..+||+|++++||||+++. + -+++|||||||+..|..++|++.. |.
T Consensus 201 Lp~~vIHgDln~~NiLv~~~~-----------------------~-------~~isGiIDFgDa~~~~~v~DLAialay~ 250 (1013)
T PRK06148 201 LPAQVIHNDANDYNILVDADD-----------------------G-------ERISGLIDFGDAVHAPRICEVAIAAAYA 250 (1013)
T ss_pred CCcceECCCCCcccEEEcCCC-----------------------C-------cceEEEEECcccccccHHHHHHHHHHHH
Confidence 577899999999999998632 1 179999999999999999999655 33
Q ss_pred cccCCCh-HHHHHHHHhcCC
Q 002043 889 DIFRGDS-SLFKQFLESYKL 907 (976)
Q Consensus 889 ~~f~gd~-~l~~~fl~~Y~~ 907 (976)
.....++ ....+|++||..
T Consensus 251 ~~~~~~p~~~~~a~laGY~s 270 (1013)
T PRK06148 251 ILDHPDPIGAAAALVAGYHA 270 (1013)
T ss_pred hcCCCChHHHHHHHHHHHhh
Confidence 3323344 477889999974
No 31
>PRK06149 hypothetical protein; Provisional
Probab=99.13 E-value=1.2e-09 Score=139.17 Aligned_cols=69 Identities=25% Similarity=0.312 Sum_probs=53.2
Q ss_pred CCCeEEecCCCCCCeEEccCCcccCCCCCCCCCCCccCCCCCCCCccCcCccceeeEEEeCCCCCCCCcccchhhhcccc
Q 002043 811 KPCSWIHSDIMDDNVYMEPCCASSRSNGNAADTGPMVNGSINGYDEFGEAKSWHCSHIIDFSNLSIGDPIYDVIPIHLDI 890 (976)
Q Consensus 811 ~~pv~iHgDl~~~NILv~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~~~~~~w~~sGIIDFgd~~iGDP~~Dlv~l~l~~ 890 (976)
.+.-+||+|++++||||+++. .+.++++|||||||+..+-.+||++..-..+
T Consensus 206 L~~g~IH~Dl~~~Nilv~~~~----------------------------~~~~~v~giIDFgD~~~~~~i~DLAial~~~ 257 (972)
T PRK06149 206 LPLQAVHLDITDDNVVGSRDA----------------------------DGRWQPDGVIDFGDLVRTWRVADLAVTCASL 257 (972)
T ss_pred CcccccCCCCCcccEEEcCCC----------------------------CCCcceeEEEEcccchhhhHHHHHHHHHHHH
Confidence 467799999999999997531 1246899999999999999999997542222
Q ss_pred ---cCCChHHHHHHHHhcCC
Q 002043 891 ---FRGDSSLFKQFLESYKL 907 (976)
Q Consensus 891 ---f~gd~~l~~~fl~~Y~~ 907 (976)
..+++....+|++||..
T Consensus 258 ~~~~~~dp~~~~~~l~GY~s 277 (972)
T PRK06149 258 LHHAGGDPFSILPAVRAYHA 277 (972)
T ss_pred hcccCCCHHHHHHHHHHHHh
Confidence 22566667889999963
No 32
>KOG2997 consensus F-box protein FBX9 [General function prediction only]
Probab=99.11 E-value=2.4e-11 Score=131.83 Aligned_cols=86 Identities=29% Similarity=0.522 Sum_probs=72.1
Q ss_pred ccCCCCCCCCHHHHHHHH-----hcCCHHHHHHHHHHhHHHHHHccCchhHHHHHHhhcCCc----------eeecCccc
Q 002043 16 DALGDLKIIPDEIICSIL-----EHLTPRDVGRLACVSSVMYIFCNEEPLWMSLCLKKASGV----------LQYKGSWK 80 (976)
Q Consensus 16 ~~lG~l~~LPdEll~~Il-----s~L~~~dL~~L~~vsr~fy~~~~~d~LWr~~~~~~~~~~----------~~~~gSWr 80 (976)
..+-+++.||||+|+.|| +.||.++|.++|+|||.||.+|++|+|||..|++.|+.. -.+.+|||
T Consensus 102 p~~~~~~~LPdEvLm~I~~~vv~~~~d~rsL~~~s~vCr~F~~~~R~~~lwR~aC~KvW~~s~~~ln~~~~~sky~~SWR 181 (366)
T KOG2997|consen 102 PELISISVLPDEVLMRIFRWVVSSLLDLRSLEQLSLVCRGFYKCARDPELWRLACLKVWQRSCIKLNPKILQSKYYTSWR 181 (366)
T ss_pred hhhhhhhhCCHHHHHHHHHHHHhhhcchhhHHHhHhhHHHHHHHHcChHHHHHHHHHHHHHhhhccchhhhhhHHHhHHH
Confidence 344568899999999999 477899999999999999999999999999999999532 24689999
Q ss_pred eeecccCCCCCccccccccccccCCCC-cccccc
Q 002043 81 KTALHLEDPPIEYDESCTRLLHFDGFY-SPFLYR 113 (976)
Q Consensus 81 ~tyl~~~~~~~~~~~~~~~~~~~~gfy-Sd~LYr 113 (976)
+|++. ++.++|+|+| |=.-|-
T Consensus 182 ~Mfl~------------RpRvrFdG~YIS~~tYi 203 (366)
T KOG2997|consen 182 EMFLE------------RPRVRFDGVYISKTTYI 203 (366)
T ss_pred HHHhh------------CcceeecceEEEEEeEe
Confidence 99998 5678999987 544443
No 33
>PLN02421 phosphotransferase, alcohol group as acceptor/kinase
Probab=99.10 E-value=1.3e-09 Score=123.27 Aligned_cols=67 Identities=21% Similarity=0.246 Sum_probs=50.2
Q ss_pred CCCCeEEecCCCCCCeEEccCCcccCCCCCCCCCCCccCCCCCCCCccCcCccceeeEEEeCCCCCCCCcccchhhhccc
Q 002043 810 CKPCSWIHSDIMDDNVYMEPCCASSRSNGNAADTGPMVNGSINGYDEFGEAKSWHCSHIIDFSNLSIGDPIYDVIPIHLD 889 (976)
Q Consensus 810 ~~~pv~iHgDl~~~NILv~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~~~~~~w~~sGIIDFgd~~iGDP~~Dlv~l~l~ 889 (976)
..+.|+.|+|+.++|||+.+.. .-..+|||+.++.+||++|++....-
T Consensus 179 ~~~~v~CHnDl~~~NiL~~~~~--------------------------------~~l~lID~EYag~nd~~fDIa~~f~E 226 (330)
T PLN02421 179 KAPVVFAHNDLLSGNLMLNEDE--------------------------------GKLYFIDFEYGSYSYRGYDIGNHFNE 226 (330)
T ss_pred CCCeEEEECCCCcccEEEeCCC--------------------------------CcEEEEcccccCCCccHHHHHHHHHH
Confidence 3678999999999999996521 23589999999999999999876421
Q ss_pred c--cCC------ChHHHHHHHHhcCCc
Q 002043 890 I--FRG------DSSLFKQFLESYKLP 908 (976)
Q Consensus 890 ~--f~g------d~~l~~~fl~~Y~~~ 908 (976)
. |.. +.+.-..|++.|.-.
T Consensus 227 ~~~~~~~~~~~p~~~~~~~fl~~Y~~~ 253 (330)
T PLN02421 227 YAGFDCDYSLYPSKEEQYHFFRHYLRP 253 (330)
T ss_pred HcccccCcccCcCHHHHHHHHHHhCCc
Confidence 1 212 345567899999643
No 34
>PLN02756 S-methyl-5-thioribose kinase
Probab=99.08 E-value=1.5e-09 Score=125.02 Aligned_cols=62 Identities=18% Similarity=0.070 Sum_probs=43.5
Q ss_pred cccCCC-CcceEEec----ceEEEEeecCCccccc---ccchhHHHHHHHHHhhCCCCCcccccceeccc
Q 002043 542 LPVGNG-SNPVYLMA----DCVVKIFVEGGFESSI---YGLGTELEFYSLLAKVNSPLKNYIPDVLASGI 603 (976)
Q Consensus 542 ~~~~~g-s~pv~~v~----~~v~K~~~~~~~~~s~---~~~~~e~~~y~~l~~~~~~l~~~~P~~~~~g~ 603 (976)
-++|+| +|+||.|. .+|||--+++..-.+. +....|..-++.|...+.-.+.++|+|++.+.
T Consensus 38 ~eiggGn~N~VyrV~~~~~svVVKqa~p~~r~vga~wpl~~~R~~~Ea~aL~~~~~~~p~~VPkVy~~de 107 (418)
T PLN02756 38 KEVGDGNLNFVYIVVSSSGSFVIKQALPYIRCIGESWPMTKERAYFEATALREHGRLCPDHVPEVYHFDR 107 (418)
T ss_pred EEcCCCceeeEEEEEcCCccEEEEeCCccccCCCccccCCccHHHHHHHHHHHhhhcCCCCCCeEEEECC
Confidence 377888 99999996 6999999966332222 33445554466776666555689999998853
No 35
>PRK09550 mtnK methylthioribose kinase; Reviewed
Probab=99.08 E-value=8.7e-10 Score=127.15 Aligned_cols=112 Identities=20% Similarity=0.178 Sum_probs=71.1
Q ss_pred hhCCCCCCcccccc-ccCCC-CcceEEec------ceEEEEeecC----Cc--ccccccchhHHHHHHHHHhhCCCCCcc
Q 002043 529 NFHKLPTLTAEEKL-PVGNG-SNPVYLMA------DCVVKIFVEG----GF--ESSIYGLGTELEFYSLLAKVNSPLKNY 594 (976)
Q Consensus 529 ~~~~l~~~~~~~~~-~~~~g-s~pv~~v~------~~v~K~~~~~----~~--~~s~~~~~~e~~~y~~l~~~~~~l~~~ 594 (976)
..+|+-.+.++... ++|+| .|-||.|. .+|||.-++. |. ..+..-...|.+....+.+ ..+.+
T Consensus 18 ~~~~~~~~~~~~~~~elggGn~N~VyrV~~~~g~~svIVKqa~p~~r~~g~~wpl~~eR~~~Eae~L~~l~~---~~p~~ 94 (401)
T PRK09550 18 LKLGLFDPKALLTAREIGDGNLNLVFRVSDTEGGKSVIVKQALPYVRVVGESWPLTLDRARIEAEALKIQAK---YVPDL 94 (401)
T ss_pred HhcCCCCCcccceeeEcCCCceEEEEEEEeCCCCeEEEEEecCcccccccccccccHHHHHHHHHHHHHHHh---hCCCC
Confidence 44566555444333 77777 99999995 3799986633 11 1122223456665554443 34468
Q ss_pred cccceeccceeecCCcceeccCCCCCcccccccccccccccccCCCccccccccccccccccccccccCCCCCCCCCccE
Q 002043 595 IPDVLASGILYVENGSYTIVPWDGKGVLDVIGKCNLTLLNCKQEEFPFGIWSKKQFEYRSAWMSVSKLSTSDGCNRIWPY 674 (976)
Q Consensus 595 ~P~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~WpY 674 (976)
+|+|++.+.. -.+
T Consensus 95 VPkV~~~D~~-------------------------------------------------------------------~~~ 107 (401)
T PRK09550 95 VPKVYHYDEE-------------------------------------------------------------------LAV 107 (401)
T ss_pred CCeEEEECCC-------------------------------------------------------------------CCE
Confidence 9999988421 158
Q ss_pred EEEecccCcc-chhhhhcCC-HHHHHHHHHHHHHHHHHhhC
Q 002043 675 IITKRCKGKM-FAQLRDALS-GEDVLNLASFLGEQLRNLHL 713 (976)
Q Consensus 675 iVm~rl~G~~-l~~v~~~Ls-~ed~~~La~~LG~~L~~LHs 713 (976)
+||+++++.. +.+ .|. .+....++.++|++|+++|-
T Consensus 108 lVME~L~~~~~lr~---~Ll~g~~~p~~a~~iG~~LA~~~f 145 (401)
T PRK09550 108 TVMEDLSDHKILRK---GLIDGKKYPKLAEHIGEFLARTLF 145 (401)
T ss_pred EEEecCCCccHHHH---HHhcCCccHHHHHHHHHHHHHHHh
Confidence 9999999843 332 232 33456889999999999994
No 36
>TIGR02906 spore_CotS spore coat protein, CotS family. Members of this family include the spore coat proteins CotS and YtaA from Bacillus subtilis and, from other endospore-forming bacteria, homologs that are more closely related to these two than to the spore coat proteins YutH and YsxE. The CotS family is more broadly distributed than YutH or YsxE, but still is not universal among spore-formers.
Probab=99.04 E-value=7.1e-09 Score=114.89 Aligned_cols=64 Identities=22% Similarity=0.328 Sum_probs=50.6
Q ss_pred CCCeEEecCCCCCCeEEccCCcccCCCCCCCCCCCccCCCCCCCCccCcCccceeeEEEeCCCCCCCCcccchhhhcccc
Q 002043 811 KPCSWIHSDIMDDNVYMEPCCASSRSNGNAADTGPMVNGSINGYDEFGEAKSWHCSHIIDFSNLSIGDPIYDVIPIHLDI 890 (976)
Q Consensus 811 ~~pv~iHgDl~~~NILv~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~~~~~~w~~sGIIDFgd~~iGDP~~Dlv~l~l~~ 890 (976)
.++.++|||++++||+++++ .+ +||||+++.+|.|++|++.....+
T Consensus 185 ~~~~liHgD~~~~Nil~~~~---------------------------------~i-~lIDfd~~~~~~~~~Dla~~l~~~ 230 (313)
T TIGR02906 185 KIRGFCHQDYAYHNILLKDN---------------------------------EV-YVIDFDYCTIDLPVRDLRKLIIKL 230 (313)
T ss_pred CcCceEcCCCCcccEEEeCC---------------------------------cE-EEEECcccccCCcHHHHHHHHHHH
Confidence 47899999999999999641 34 899999999999999998654333
Q ss_pred c----CCChHHHHHHHHhcCCc
Q 002043 891 F----RGDSSLFKQFLESYKLP 908 (976)
Q Consensus 891 f----~gd~~l~~~fl~~Y~~~ 908 (976)
. .-+.+.+++|+++|...
T Consensus 231 ~~~~~~~d~~~~~~~l~gY~~~ 252 (313)
T TIGR02906 231 MKKNGVWDLEKAKEIIEAYSSI 252 (313)
T ss_pred HHhccCCCHHHHHHHHHHhhcc
Confidence 3 12446788999999853
No 37
>cd05120 APH_ChoK_like Aminoglycoside 3'-phosphotransferase (APH) and Choline Kinase (ChoK) family. The APH/ChoK family is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). The family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides and macrolides, leads to their inactivation and to bacterial antibiotic resistance. Phosphorylation of choline, ethanolamine, and homoserine serves
Probab=99.04 E-value=2.8e-09 Score=102.50 Aligned_cols=93 Identities=32% Similarity=0.423 Sum_probs=66.0
Q ss_pred CCCcceEEec----ceEEEEeecCCcccccccchhHHHHHHHHHhhCCCCCcccccceeccceeecCCcceeccCCCCCc
Q 002043 546 NGSNPVYLMA----DCVVKIFVEGGFESSIYGLGTELEFYSLLAKVNSPLKNYIPDVLASGILYVENGSYTIVPWDGKGV 621 (976)
Q Consensus 546 ~gs~pv~~v~----~~v~K~~~~~~~~~s~~~~~~e~~~y~~l~~~~~~l~~~~P~~~~~g~~~~~~~~~~~~~~~~~~~ 621 (976)
++++.||.+. .+|||.+..... ...+..|.+++..|+.. ..++|+++.....
T Consensus 9 g~~~~v~~~~~~~~~~~iK~~~~~~~---~~~~~~e~~~~~~l~~~----~~~~p~~~~~~~~----------------- 64 (155)
T cd05120 9 GLTNRVYLLGTKDEDYVLKINPSREK---GADREREVAILQLLARK----GLPVPKVLASGES----------------- 64 (155)
T ss_pred ccccceEEEEecCCeEEEEecCCCCc---hhHHHHHHHHHHHHHHc----CCCCCeEEEEcCC-----------------
Confidence 3488999888 799999874322 23467899999988654 4678888765311
Q ss_pred ccccccccccccccccCCCccccccccccccccccccccccCCCCCCCCCccEEEEecccCccchhhhhcCCHHHHHHHH
Q 002043 622 LDVIGKCNLTLLNCKQEEFPFGIWSKKQFEYRSAWMSVSKLSTSDGCNRIWPYIITKRCKGKMFAQLRDALSGEDVLNLA 701 (976)
Q Consensus 622 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~WpYiVm~rl~G~~l~~v~~~Ls~ed~~~La 701 (976)
....|++|++++|..+... +......++
T Consensus 65 ------------------------------------------------~~~~~~v~e~~~g~~~~~~----~~~~~~~~~ 92 (155)
T cd05120 65 ------------------------------------------------DGWSYLLMEWIEGETLDEV----SEEEKEDIA 92 (155)
T ss_pred ------------------------------------------------CCccEEEEEecCCeecccC----CHHHHHHHH
Confidence 1247999999999988764 555566667
Q ss_pred HHHHHHHHHhhCC
Q 002043 702 SFLGEQLRNLHLL 714 (976)
Q Consensus 702 ~~LG~~L~~LHsi 714 (976)
.++++.++.||.+
T Consensus 93 ~~~~~~l~~lh~~ 105 (155)
T cd05120 93 EQLAELLAKLHQL 105 (155)
T ss_pred HHHHHHHHHHhCC
Confidence 7777777777743
No 38
>PRK10271 thiK thiamine kinase; Provisional
Probab=99.02 E-value=2.8e-09 Score=110.87 Aligned_cols=109 Identities=12% Similarity=0.173 Sum_probs=69.7
Q ss_pred CCCCeEEecCCCCCCeEEccCCcccCCCCCCCCCCCccCCCCCCCCccCcCccceeeEEEeCCCCCCCCcccchhhhccc
Q 002043 810 CKPCSWIHSDIMDDNVYMEPCCASSRSNGNAADTGPMVNGSINGYDEFGEAKSWHCSHIIDFSNLSIGDPIYDVIPIHLD 889 (976)
Q Consensus 810 ~~~pv~iHgDl~~~NILv~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~~~~~~w~~sGIIDFgd~~iGDP~~Dlv~l~l~ 889 (976)
..+.+.+|+|++|+||++.++ .+. |||||.++.|||++|++.++..
T Consensus 74 ~l~~~p~H~D~~~~N~~~~~~---------------------------------~~~-lIDwe~a~~gDp~~DLa~~~~~ 119 (188)
T PRK10271 74 PLRLAPLHMDVHAGNLVHSAS---------------------------------GLR-LIDWEYAGDGDIALELAAVWVE 119 (188)
T ss_pred CCCeeeecCCCCCccEEEECC---------------------------------CEE-EEeCCcccCCCHHHHHHHHHcC
Confidence 457899999999999999652 354 9999999999999999987653
Q ss_pred ccCCChHHHHHHHHhcCCccccccccCCCCCCchhhHHHHHHHHhhhcccChhhHHhhhcccccCCCCHHHHHHHHhc
Q 002043 890 IFRGDSSLFKQFLESYKLPLVRRMQQHGSGGGKFSRLSYHAMCYCILHDDNVLGTIFSTWKELRTAKSWEEVEMTVWG 967 (976)
Q Consensus 890 ~f~gd~~l~~~fl~~Y~~~~~~~~~~~~~~~~~~~~~~~r~m~y~ilh~~~~l~~~~~~~~~~~~~~s~~el~~~~~g 967 (976)
+..-.+.|++.|.-.... ....+++|+..+..--..=.|.++.-.|.. ...+...++++..|-
T Consensus 120 ----~~~~~~~~l~~Y~~~~~~----------d~~~~~~~~~~W~p~~~~m~llWyev~~qq-~~d~~fl~~a~~~~~ 182 (188)
T PRK10271 120 ----NTEQHRQLVNDYATRAKI----------DAAQLWRQVRRWFPWVLMLKAGWFEYRWRQ-TGDQQFIRLADDTWR 182 (188)
T ss_pred ----CHHHHHHHHHHHhCccCC----------CHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-cCcHHHHHHHHHHHH
Confidence 566677899999822100 112355555544443333334444433333 223445555555554
No 39
>KOG1633 consensus F-box protein JEMMA and related proteins with JmjC, PHD, F-box and LRR domains [Chromatin structure and dynamics]
Probab=98.95 E-value=2.9e-09 Score=130.03 Aligned_cols=219 Identities=24% Similarity=0.442 Sum_probs=143.6
Q ss_pred HHHHHHh-ccCCccccc---cccCCcCCCCCCHHHHHHHhC-CeeEEEEecC-CceEEeeHHHHHHHHhhcCCCCCee-E
Q 002043 141 EEFDREC-AEEPILLSG---LADTWPARNTWTIDQLLTRYG-DTAFRISQRS-VRSISMKFKDYVAYMNVQHDEDPLY-I 213 (976)
Q Consensus 141 eeF~~~Y-~~kPVII~g---~~~~WpA~~~Wt~eyL~e~~G-d~~V~V~~~s-~~~~~m~l~dfl~~~~~~~d~~plY-L 213 (976)
-+|.++- ...|.++++ +...-|. ...|...-....| ++.+.|.+.. ....+|+|.+|++|+.....+. +| +
T Consensus 8 ~ef~~~~~~~~p~~~~~~~~lg~~~p~-p~f~v~dv~~~vg~~r~~~v~dv~~q~~~km~~~~~~~yy~~~~~~R-~yNV 85 (776)
T KOG1633|consen 8 VEFLQDNGLRVPILFRNKDGLGMTLPS-PDFTVNDVKELVGSDRMIDVVDVNTQKDCKMTLKEFVKYYSSPQRKR-LYNV 85 (776)
T ss_pred chhhhhcccccchhhccCCCccccCCC-CCcchhhhHHhhCCCccceeeeeeccccccccHHHHhhhhcCcchhh-hhhe
Confidence 3667666 888888875 2223333 2566665555666 4555555432 2567999999999988654333 44 2
Q ss_pred eccccccchhhhhhccCCCCcccc-chhc-ccCC---CCCCC-cceEEeecCCCCCcccccCCCCcccEEEEEEEEEEEE
Q 002043 214 FDYKFGENAQGLLEDYRVPDLFQE-DLFN-VLDG---DMRPS-YRWVIIGPQRSGASWHVDPALTSAWNTLLCGRKRWAL 287 (976)
Q Consensus 214 ~d~~f~e~~P~L~~Dy~vP~~f~e-Dlf~-~l~~---~~rp~-~rwL~iGp~gSgT~lH~Dp~~t~awn~qI~GrKrW~L 287 (976)
-.-.|.. ..|..-...|+.... ||.. +.+. ...|. .....|+.+++.|.+|+|+.++++|+-.+.|.|.+.|
T Consensus 86 isLEfS~--Trl~~~V~~P~ivr~ldwV~n~wP~~~~~~~P~vqkyclmsv~~~Ytdfhidfggtsvwyhil~G~K~f~l 163 (776)
T KOG1633|consen 86 ISLEFSD--TRLSNLVESPEIVRKLDWVDNQWPDDLKMEYPKVQKYCLMSVKDSYTDFHIDFGGTSVWYHILAGEKTFYL 163 (776)
T ss_pred eccccCc--chHHhcCCCchhhhhhhchhccCCchhcccccccccceeeeccccccccccCCCCcchhhhhhccccceee
Confidence 2222221 123333344543321 2221 1111 12333 3568899999999999999999999999999999999
Q ss_pred eCCCCCCCcceeeecCCCCCccccCCcchhhhhhhCCCCCCCCCCEEEEEcCCCEEEeCCCCceeeEecCCcEEEeeccc
Q 002043 288 YPPGRVPLGVTVHVNEDDGDVNIETPSSLEWWLDFYPLLADDDKPIECTQLPGETIVVPSGWWHCILNLETTIAVTQNFV 367 (976)
Q Consensus 288 fPP~~~p~~v~~~~~~~~s~vd~~~Pdsl~W~l~~yP~l~~~~~~~e~vL~PGDvLfVP~GWWH~V~NLd~SISVt~NFv 367 (976)
+||...-..++.... +.. +-+ ..+|...- ..++.|++++|++||||.||.|.|+...+|+++..||.
T Consensus 164 I~pt~~nl~~ye~w~---~s~----~q~----~~ffGd~V--dkC~~~~l~~g~T~~iPsGwIhAV~Tp~d~l~fgGnfl 230 (776)
T KOG1633|consen 164 IPPTCENLELYECWE---SST----PQD----EIFFGDCV--DKCYKCILKQGQTLFIPSGWIHAVLTPTDCLVFGGNFL 230 (776)
T ss_pred eCCcccchhhhhhhh---hcc----ccc----ccccCCcc--ceeEEEEeccCceEecccceeEeeecCcchheeccchh
Confidence 999976554433221 110 100 12333322 47899999999999999999999999999999999999
Q ss_pred CCCCHHHHH
Q 002043 368 DSKNFEFVC 376 (976)
Q Consensus 368 ~~~nl~~vl 376 (976)
..-++...+
T Consensus 231 hsl~i~~QL 239 (776)
T KOG1633|consen 231 HSLTIEMQL 239 (776)
T ss_pred hhhhhHHHH
Confidence 888876655
No 40
>TIGR02904 spore_ysxE spore coat protein YsxE. Members of this family are homologs of the Bacillus subtilis spore coat protein CotS. Members of this family, designated YsxE, are found only in the family Bacillaceae, from among the endospore-forming members of the Firmicutes branch of the Bacteria. As a rule, the ysxE gene is found immediately downstream of spoVID, a gene necessary for spore coat assembly. The protein has been shown to be part of the spore coat.
Probab=98.89 E-value=3.4e-08 Score=110.30 Aligned_cols=65 Identities=11% Similarity=0.207 Sum_probs=52.2
Q ss_pred CCCeEEecCCCCCCeEEccCCcccCCCCCCCCCCCccCCCCCCCCccCcCccceeeEEEeCCCCCCCCcccchhhhcccc
Q 002043 811 KPCSWIHSDIMDDNVYMEPCCASSRSNGNAADTGPMVNGSINGYDEFGEAKSWHCSHIIDFSNLSIGDPIYDVIPIHLDI 890 (976)
Q Consensus 811 ~~pv~iHgDl~~~NILv~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~~~~~~w~~sGIIDFgd~~iGDP~~Dlv~l~l~~ 890 (976)
.+.+++|||+.++|||++++ ..++||||+.+.+|.|++||+.....+
T Consensus 194 ~~~~lcHgD~~~~Nvl~~~~---------------------------------~~~~iIDfd~~~~d~~~~DLa~~~~~~ 240 (309)
T TIGR02904 194 WRTVLVHGKLSLSHFLYDET---------------------------------RGGYFINFEKASFASPLTDLAAFFRRS 240 (309)
T ss_pred cceeeeCCCCcHHhEEEcCC---------------------------------CCEEEEEhhhcccCCcHHHHHHHHHHH
Confidence 57799999999999999752 367999999999999999998553333
Q ss_pred ---cCCChHHHHHHHHhcCCc
Q 002043 891 ---FRGDSSLFKQFLESYKLP 908 (976)
Q Consensus 891 ---f~gd~~l~~~fl~~Y~~~ 908 (976)
...+....+++|++|.-.
T Consensus 241 ~~~~~~~~~~~~~~l~~Y~~~ 261 (309)
T TIGR02904 241 FGTYPQPIDEMFEWFYTYEKT 261 (309)
T ss_pred HhhCCCChHHHHHHHHHHHhc
Confidence 233446688999999854
No 41
>COG3231 Aph Aminoglycoside phosphotransferase [Translation, ribosomal structure and biogenesis]
Probab=98.88 E-value=4.4e-08 Score=103.44 Aligned_cols=163 Identities=22% Similarity=0.265 Sum_probs=102.3
Q ss_pred CccEEEEecccCccchhhhhcCCHHHHHHHHHHHHHHHHHhhCCCCCCCCCCccccccCCCCCCCCCcccccccCCCCch
Q 002043 671 IWPYIITKRCKGKMFAQLRDALSGEDVLNLASFLGEQLRNLHLLPCPPFNESSLSDKLKTEPPFNNGFVEDVVDTSSVPA 750 (976)
Q Consensus 671 ~WpYiVm~rl~G~~l~~v~~~Ls~ed~~~La~~LG~~L~~LHsip~p~~~~~~~~d~~~~g~~~~~~~~~~~~~~~~~~~ 750 (976)
.|-|++|+.++|.++....-.++ .+++..-|++.|+.||.+|...-+ -
T Consensus 87 ~~~wLl~salpG~~~s~~~~~~~---p~r~v~~la~aLR~LH~l~~~aCP-----------------------------F 134 (266)
T COG3231 87 DQAWLLMSALPGEDASHPRYALD---PKRAVPLLAEALRRLHELPVEACP-----------------------------F 134 (266)
T ss_pred chhHHhhhhcCCCcccchhhcCC---HHHHHHHHHHHHHHHhcCChhhCC-----------------------------c
Confidence 38899999999999987554444 556677899999999998754322 1
Q ss_pred hHHHHHHHHHHHHHHHHHHhhhcCCCCCHHHHHHHhhhCChhHHHHhhhhhhccCCccCCCCCeEEecCCCCCCeEEccC
Q 002043 751 EWEIFIRTLARKKKNLVNRLTAWGHPIPKALIDKVDEYIPDDFVKLLDIYQDENGLNKVCKPCSWIHSDIMDDNVYMEPC 830 (976)
Q Consensus 751 ~W~~~~~~l~~r~~~~~~~~~~wg~~lp~~l~e~l~~ylp~d~~~ll~~~~~e~~~~~~~~~pv~iHgDl~~~NILv~~~ 830 (976)
.|+ +.++-+++.++.+. |..-+.. ..+++--....++.+.... .-+....-|.+|||.=-=|||+++
T Consensus 135 d~r-----l~~rl~~a~~r~~a-~~vdesd---fd~e~qgr~~~El~d~L~~---~rp~~edLVv~HGDACLPN~i~d~- 201 (266)
T COG3231 135 DRR-----LARRLAKARARVRA-GLVDESD---FDEERQGRTAEELFDELEA---RRPAVEDLVVTHGDACLPNFILDG- 201 (266)
T ss_pred chH-----HHHHHHHHHHHHhc-cCCChhh---cChhhcCCCHHHHHHHHHh---cCCchhhceeecCcccCcceEecC-
Confidence 221 12222233333322 1111010 0011111112223332211 112235679999999999999964
Q ss_pred CcccCCCCCCCCCCCccCCCCCCCCccCcCccceeeEEEeCCCCCCCCcccchhhhcccc---cCCChHHHHHHHHhcCC
Q 002043 831 CASSRSNGNAADTGPMVNGSINGYDEFGEAKSWHCSHIIDFSNLSIGDPIYDVIPIHLDI---FRGDSSLFKQFLESYKL 907 (976)
Q Consensus 831 ~~~~~~~~~~~~~~~~~~~~~~~~dg~~~~~~w~~sGIIDFgd~~iGDP~~Dlv~l~l~~---f~gd~~l~~~fl~~Y~~ 907 (976)
|+.+|.||+|++++||+..||.-..+++ +.|+ .....|+..||.
T Consensus 202 --------------------------------~rf~GfIDlGrlGVaDRh~DLala~~s~~~nl~g~-~~~~~fl~~Yg~ 248 (266)
T COG3231 202 --------------------------------WRFSGFIDLGRLGVADRHQDLALATWSLRFNLGGD-VWDDPFLDAYGR 248 (266)
T ss_pred --------------------------------CceEEeeecCcccchHHHHhHHHHHHHHHhccCcc-hhhHHHHHHhCc
Confidence 5899999999999999999998887764 2233 455679999997
Q ss_pred cccc
Q 002043 908 PLVR 911 (976)
Q Consensus 908 ~~~~ 911 (976)
...+
T Consensus 249 ~~~d 252 (266)
T COG3231 249 GAID 252 (266)
T ss_pred CCCC
Confidence 6544
No 42
>PF12937 F-box-like: F-box-like; PDB: 1P22_A 2OVP_B 2OVR_B 2OVQ_B 1FS1_A 1FS2_C 1FQV_I 1LDK_E 2AST_B 2ASS_B.
Probab=98.85 E-value=1.8e-09 Score=87.41 Aligned_cols=47 Identities=38% Similarity=0.709 Sum_probs=41.2
Q ss_pred CCCCCHHHHHHHHhcCCHHHHHHHHHHhHHHHHHccCchhHHHHHHh
Q 002043 21 LKIIPDEIICSILEHLTPRDVGRLACVSSVMYIFCNEEPLWMSLCLK 67 (976)
Q Consensus 21 l~~LPdEll~~Ils~L~~~dL~~L~~vsr~fy~~~~~d~LWr~~~~~ 67 (976)
+..||+|++..||++|++.||.++++|||.||..+.++.||+.+|++
T Consensus 1 i~~LP~Eil~~If~~L~~~dl~~~~~vcr~w~~~~~~~~lW~~~~~r 47 (47)
T PF12937_consen 1 ISSLPDEILLEIFSYLDPRDLLRLSLVCRRWRRIANDNSLWRRLCLR 47 (47)
T ss_dssp CCCS-HHHHHHHHTTS-HHHHHHHTTSSHHHHHHHTCCCHHHHHC--
T ss_pred ChHhHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHCChhhhhhhccC
Confidence 36799999999999999999999999999999999999999999875
No 43
>PF07914 DUF1679: Protein of unknown function (DUF1679); InterPro: IPR012877 This region is found in a number of Caenorhabditis elegans and Caenorhabditis briggsae proteins, in one case (Q19034 from SWISSPROT) as a repeat. In many of the family members, this region is associated with the CHK region described by SMART as being found in zinc finger-C4 and HLH domain-containing kinases. In fact, one member of this family (Q9GUC1 from SWISSPROT) is annotated as being a member of the nuclear hormone receptor family, and contains regions typical of such proteins (IPR000536 from INTERPRO, IPR008946 from INTERPRO, and IPR001628 from INTERPRO).
Probab=98.79 E-value=1.7e-08 Score=117.37 Aligned_cols=169 Identities=20% Similarity=0.254 Sum_probs=97.0
Q ss_pred ccEEEEecccCccchhhhhcCCHHHHHHHHHHHHHHHHHhhCCCCCCCCCCccccccCCCCCCCCCcccccccCCCCchh
Q 002043 672 WPYIITKRCKGKMFAQLRDALSGEDVLNLASFLGEQLRNLHLLPCPPFNESSLSDKLKTEPPFNNGFVEDVVDTSSVPAE 751 (976)
Q Consensus 672 WpYiVm~rl~G~~l~~v~~~Ls~ed~~~La~~LG~~L~~LHsip~p~~~~~~~~d~~~~g~~~~~~~~~~~~~~~~~~~~ 751 (976)
-.||+|+++++..--+..+.++.+|...|++.||.+-+.--+++....... .|..+. ...
T Consensus 149 kG~IimE~ven~~~~~~~e~~~~eql~~iv~aLA~~~A~sl~ls~ee~~~~-------~~~~~~-------------~~~ 208 (414)
T PF07914_consen 149 KGFIIMEYVENVHSMDMYENLSVEQLLQIVRALAKFHALSLKLSEEEKKSI-------SGPDFL-------------EEM 208 (414)
T ss_pred CCEEEEeccCCceeecccCCCCHHHHHHHHHHHHHHHHhHccCCHHHhhhc-------cCchHH-------------HHH
Confidence 359999999998777788899999999988887776555444432221110 011110 011
Q ss_pred HHHHHHHHHHHHHHHHHHhhhc-CCCCCH---HHHHHHhhhCChhHHHHhhhhhhccCCccC-CCCCeEEecCCCCCCeE
Q 002043 752 WEIFIRTLARKKKNLVNRLTAW-GHPIPK---ALIDKVDEYIPDDFVKLLDIYQDENGLNKV-CKPCSWIHSDIMDDNVY 826 (976)
Q Consensus 752 W~~~~~~l~~r~~~~~~~~~~w-g~~lp~---~l~e~l~~ylp~d~~~ll~~~~~e~~~~~~-~~~pv~iHgDl~~~NIL 826 (976)
...++..- .-++.......- |.--|. ..++.++.|+++.. ...... ..+.. -.+||++|||||..|||
T Consensus 209 ~~~~~~~~--~~~~~~~~~~~~~~~~~~e~~~~~i~~~~~~~~~~~--~~~~~~---~i~~~lG~~~VL~HGDLw~~NiL 281 (414)
T PF07914_consen 209 FGEFFSEE--GMKKIFENLRKIFGFFSPEKLEELIEKFEHYLPDIK--NFEKAS---NINKQLGIKPVLVHGDLWSSNIL 281 (414)
T ss_pred HHHHhchH--HHHHHHHHHHhhccccChHHHHHHHHHHHHhcccHH--hHHHHh---hhHHhcCCCcceecCCccHHhee
Confidence 12222210 012222222221 011122 34566666653211 111110 00111 24999999999999999
Q ss_pred EccCCcccCCCCCCCCCCCccCCCCCCCCccCcCccceeeEEEeCCCCCCCCcccchhhhccc-ccCCCh
Q 002043 827 MEPCCASSRSNGNAADTGPMVNGSINGYDEFGEAKSWHCSHIIDFSNLSIGDPIYDVIPIHLD-IFRGDS 895 (976)
Q Consensus 827 v~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~~~~~~w~~sGIIDFgd~~iGDP~~Dlv~l~l~-~f~gd~ 895 (976)
.+.+. + ++.++.+||||-.+.+|-|+.|++.+... +...|+
T Consensus 282 w~k~~-----------------------~-----g~~~l~AIIDwQ~vh~G~~~eDl~Rll~~~lS~edR 323 (414)
T PF07914_consen 282 WDKDS-----------------------D-----GKLKLKAIIDWQCVHRGSPAEDLARLLVSCLSGEDR 323 (414)
T ss_pred eecCC-----------------------c-----hhHHHHHHHHHHHhhcCchHHHHHHHHHhcCCHHHH
Confidence 98732 2 24579999999999999999999988653 333343
No 44
>KOG1356 consensus Putative transcription factor 5qNCA, contains JmjC domain [Transcription]
Probab=98.78 E-value=7.8e-10 Score=132.08 Aligned_cols=241 Identities=22% Similarity=0.414 Sum_probs=145.7
Q ss_pred CHHHHHHHh-ccCCccccccccCCcCCCCCCHHHHHHHhCCeeEEEEecCCc----eEEee-HHHHHHHHhhcC---CCC
Q 002043 139 TREEFDREC-AEEPILLSGLADTWPARNTWTIDQLLTRYGDTAFRISQRSVR----SISMK-FKDYVAYMNVQH---DED 209 (976)
Q Consensus 139 S~eeF~~~Y-~~kPVII~g~~~~WpA~~~Wt~eyL~e~~Gd~~V~V~~~s~~----~~~m~-l~dfl~~~~~~~---d~~ 209 (976)
....|.+.+ .++|||++|+.+.... ..|.++.|-..+|+....+..+... ...|. |.+|++-+.... ...
T Consensus 529 n~~~FQEhWkqGqPViVs~V~~~l~g-~lW~P~a~~~~~g~q~~~l~n~~~~~i~s~d~~~~fwegFe~~~kr~~~~~g~ 607 (889)
T KOG1356|consen 529 NLKHFQEHWKQGQPVIVSGVHKKLNG-LLWKPEALSRAFGDQVVDLSNCNNSQIISNDCVDNFWEGFEGYSKRLKSENGW 607 (889)
T ss_pred HHHHHHHHHhcCCcEEehHhhhhccc-cccchHHHHHHhccchhhhhcCCCCCccccchhhhHHHhhcccccCcccccCC
Confidence 456888888 9999999999987665 5899999999999987766544221 12233 556665443221 223
Q ss_pred C--eeEeccc----cccchh----hhhhccCCCCccc-cchhc---ccCC-CCCCCc---ceEE------eecCCCCCcc
Q 002043 210 P--LYIFDYK----FGENAQ----GLLEDYRVPDLFQ-EDLFN---VLDG-DMRPSY---RWVI------IGPQRSGASW 265 (976)
Q Consensus 210 p--lYL~d~~----f~e~~P----~L~~Dy~vP~~f~-eDlf~---~l~~-~~rp~~---rwL~------iGp~gSgT~l 265 (976)
| |-|.||. |.+.+| +|....++|+|-. +..++ .|++ -.+|+. .|.- .|-..+.|.+
T Consensus 608 p~vLKLKDWpp~~~Fkd~lP~r~eell~sLPlpEYt~r~G~LNlAs~LP~~fv~PDLGPk~y~AYG~~~e~gr~~gtTnL 687 (889)
T KOG1356|consen 608 PEVLKLKDWPPGEDFKDMLPRRFEELLASLPLPEYTDRDGKLNLASKLPEGFVRPDLGPKLYNAYGVSTELGRGDGTTNL 687 (889)
T ss_pred eeEEeecCCCchHhHhhhhhHHHHHHHHcCCchhhhcCCCccchHhhCcccccCCCCCchhhhhccccccccCCCCceee
Confidence 4 5677884 333334 4677778888753 22333 3332 134442 1111 1223567899
Q ss_pred cccCCCCcccEEEEE-EE------------------------------------EEEEEeCCCCCCCccee--eecCCCC
Q 002043 266 HVDPALTSAWNTLLC-GR------------------------------------KRWALYPPGRVPLGVTV--HVNEDDG 306 (976)
Q Consensus 266 H~Dp~~t~awn~qI~-Gr------------------------------------KrW~LfPP~~~p~~v~~--~~~~~~s 306 (976)
|.|.. ++.|++++ |. -.|-+|.-.++|....+ .+..+.+
T Consensus 688 H~dvS--DaVNILvyv~e~~~~~~~~~~~~k~~~~~~~de~~~~~~~~~~e~~GALWhIF~~~Dv~KireyL~k~~~E~~ 765 (889)
T KOG1356|consen 688 HLDVS--DAVNILVYVGEPPGQIEQIAKVLKKIQEGDLDEITRSRISSVSETPGALWHIFRAQDVPKIREYLRKVCKEQG 765 (889)
T ss_pred ceehh--hhhhheeeeccCCchHHhHHHHHHhhhhcchhhhhhhhccccccCCcchhhhhhhcchHHHHHHHHHhhHHhc
Confidence 99986 46787776 11 23444444443322110 0000111
Q ss_pred -Cc-cccCCc-chhhhhhhCCC--CCC--CCCCEEEEEcCCCEEEeCCCCceeeEecCCcEEEeecccCCCCHHHHHHHh
Q 002043 307 -DV-NIETPS-SLEWWLDFYPL--LAD--DDKPIECTQLPGETIVVPSGWWHCILNLETTIAVTQNFVDSKNFEFVCLDF 379 (976)
Q Consensus 307 -~v-d~~~Pd-sl~W~l~~yP~--l~~--~~~~~e~vL~PGDvLfVP~GWWH~V~NLd~SISVt~NFv~~~nl~~vl~dl 379 (976)
.+ ...+|. +..||+++|=+ |.+ ...++.++|..||++|||+|..|||+||-.||.|+..||+|.|+... ..+
T Consensus 766 ~~~~~v~hPIhDQS~YLd~~lr~RLkeEyGVe~WtfvQ~LGdAVfIPAGaPHQVrNLkSCikVa~DFVSPE~v~ec-~rL 844 (889)
T KOG1356|consen 766 HEVPKVHHPIHDQSWYLDRYLRRRLKEEYGVEPWTFVQFLGDAVFIPAGAPHQVRNLKSCIKVAEDFVSPEHVSEC-FRL 844 (889)
T ss_pred CCCCcccCCCcccceeccHHHHHHHHHHhCCCccchhhcccceEEecCCCcHHhhhhhhHHHHHHhhCChhhHHHH-HHH
Confidence 01 112231 12466655421 211 14789999999999999999999999999999999999999999774 444
Q ss_pred hccC
Q 002043 380 APGY 383 (976)
Q Consensus 380 ~~~~ 383 (976)
...|
T Consensus 845 T~Ef 848 (889)
T KOG1356|consen 845 TQEF 848 (889)
T ss_pred HHHH
Confidence 4444
No 45
>PTZ00384 choline kinase; Provisional
Probab=98.77 E-value=3.2e-07 Score=105.86 Aligned_cols=42 Identities=14% Similarity=0.154 Sum_probs=36.2
Q ss_pred CCCeEEecCCCCCCeEEccCCcccCCCCCCCCCCCccCCCCCCCCccCcCccceeeEEEeCCCCCCCCcccchhhh
Q 002043 811 KPCSWIHSDIMDDNVYMEPCCASSRSNGNAADTGPMVNGSINGYDEFGEAKSWHCSHIIDFSNLSIGDPIYDVIPI 886 (976)
Q Consensus 811 ~~pv~iHgDl~~~NILv~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~~~~~~w~~sGIIDFgd~~iGDP~~Dlv~l 886 (976)
.+.||.|.|+.++|||.+.+ + .-+|||+-++++||++|++..
T Consensus 225 ~~~VfCHNDL~~gNIL~~~~---------------------------------~-l~lID~EYA~~n~~~fDLAn~ 266 (383)
T PTZ00384 225 NSVLFCHNDLFFTNILDFNQ---------------------------------G-IYFIDFDFAGFNYVGWEIANF 266 (383)
T ss_pred cceeeeeccCCcccEEecCC---------------------------------C-EEEEEeccccCCchHhHHHHH
Confidence 46899999999999998531 2 479999999999999999876
No 46
>KOG3706 consensus Uncharacterized conserved protein [Function unknown]
Probab=98.76 E-value=5.7e-09 Score=117.86 Aligned_cols=112 Identities=24% Similarity=0.302 Sum_probs=75.2
Q ss_pred ceEEeecCCC-CCcccccCCCCcccEEEEEEEEEEEEeCCCCCCCcceeeecCCCCCccccCCcchhhhhhhCCCCCCCC
Q 002043 252 RWVIIGPQRS-GASWHVDPALTSAWNTLLCGRKRWALYPPGRVPLGVTVHVNEDDGDVNIETPSSLEWWLDFYPLLADDD 330 (976)
Q Consensus 252 rwL~iGp~gS-gT~lH~Dp~~t~awn~qI~GrKrW~LfPP~~~p~~v~~~~~~~~s~vd~~~Pdsl~W~l~~yP~l~~~~ 330 (976)
.++++.|+|| |-+.|||-- .+|.+||.|||+|+||.|...-.-.+. .+.-||+..+ +. .
T Consensus 319 aNvYLTPagSqGfaPHyDdI--eaFvlQvEGrK~Wrly~P~~~~eel~l-----~sS~Nf~eed-----------lg--e 378 (629)
T KOG3706|consen 319 ANVYLTPAGSQGFAPHYDDI--EAFVLQVEGRKHWRLYHPTVPLEELAL-----VSSDNFTEED-----------LG--E 378 (629)
T ss_pred cceeecCCCCCCCCCchhhh--hhhhheeccceeeEeecCCCcHhhhhh-----ccCCCCChhH-----------hC--C
Confidence 4689999998 789999965 679999999999999998743111111 0111233222 11 2
Q ss_pred CCEEEEEcCCCEEEeCCCCceeeEecC--CcEEEeecccCCCCHHHHHHHhhccC
Q 002043 331 KPIECTQLPGETIVVPSGWWHCILNLE--TTIAVTQNFVDSKNFEFVCLDFAPGY 383 (976)
Q Consensus 331 ~~~e~vL~PGDvLfVP~GWWH~V~NLd--~SISVt~NFv~~~nl~~vl~dl~~~~ 383 (976)
+.++.+|+|||+||+|.|..||...-+ .|+-||..---...+.+++.+.+++.
T Consensus 379 PV~e~vle~GDllYfPRG~IHQA~t~~~vHSlHvTlStyqq~s~anlle~~ip~a 433 (629)
T KOG3706|consen 379 PVHEFVLEPGDLLYFPRGTIHQADTPALVHSLHVTLSTYQQNSWANLLEDTIPGA 433 (629)
T ss_pred chHHhhcCCCcEEEecCcceeeccccchhceeEEEeehhhhhhHHHHHHHHHHHH
Confidence 568999999999999999999977654 23333332222344667777776654
No 47
>PTZ00296 choline kinase; Provisional
Probab=98.74 E-value=2.2e-07 Score=109.13 Aligned_cols=43 Identities=16% Similarity=0.231 Sum_probs=36.9
Q ss_pred CCCCeEEecCCCCCCeEEccCCcccCCCCCCCCCCCccCCCCCCCCccCcCccceeeEEEeCCCCCCCCcccchhhh
Q 002043 810 CKPCSWIHSDIMDDNVYMEPCCASSRSNGNAADTGPMVNGSINGYDEFGEAKSWHCSHIIDFSNLSIGDPIYDVIPI 886 (976)
Q Consensus 810 ~~~pv~iHgDl~~~NILv~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~~~~~~w~~sGIIDFgd~~iGDP~~Dlv~l 886 (976)
..+.||.|.|+.++|||..+. . .-+|||+-++..||++|++..
T Consensus 281 ~~~~VfCHNDl~~~NiL~~~~---------------------------------~-l~LIDfEYAg~ndpafDIAn~ 323 (442)
T PTZ00296 281 ANDIVFCHNDLQENNIINTNK---------------------------------C-LRLIDFEYSGYNFLATDIANF 323 (442)
T ss_pred cCCeeEEeCCCCccceeecCC---------------------------------C-EEEEeecccccccHHHHHHHH
Confidence 358999999999999997531 2 589999999999999999865
No 48
>PRK14879 serine/threonine protein kinase; Provisional
Probab=98.50 E-value=8.1e-07 Score=92.69 Aligned_cols=60 Identities=25% Similarity=0.320 Sum_probs=42.5
Q ss_pred EEecCCCCCCeEEccCCcccCCCCCCCCCCCccCCCCCCCCccCcCccceeeEEEeCCCCCCCCcccchhhhcccc----
Q 002043 815 WIHSDIMDDNVYMEPCCASSRSNGNAADTGPMVNGSINGYDEFGEAKSWHCSHIIDFSNLSIGDPIYDVIPIHLDI---- 890 (976)
Q Consensus 815 ~iHgDl~~~NILv~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~~~~~~w~~sGIIDFgd~~iGDP~~Dlv~l~l~~---- 890 (976)
++|+|++|+|||++. .-..|||||.+.++++..|++.....+
T Consensus 116 i~H~Dl~p~Nil~~~----------------------------------~~~~liDf~~a~~~~~~~~~~~~~~~~~~~~ 161 (211)
T PRK14879 116 IIHGDLTTSNMILSG----------------------------------GKIYLIDFGLAEFSKDLEDRAVDLHVLLRSL 161 (211)
T ss_pred cccCCCCcccEEEEC----------------------------------CCEEEEECCcccCCCcHHhhhccHHHHHHHh
Confidence 489999999999963 134699999999999998885422111
Q ss_pred --cCCC--hHHHHHHHHhcCCc
Q 002043 891 --FRGD--SSLFKQFLESYKLP 908 (976)
Q Consensus 891 --f~gd--~~l~~~fl~~Y~~~ 908 (976)
...+ ..++..|+++|...
T Consensus 162 ~~~~~~~~~~~~~~f~~gY~~~ 183 (211)
T PRK14879 162 ESTHPDWAEELFEAFLEGYREV 183 (211)
T ss_pred hccCcchHHHHHHHHHHHHHHh
Confidence 0111 26777888888743
No 49
>TIGR01767 MTRK 5-methylthioribose kinase. This enzyme is involved in the methionine salvage pathway in certain bacteria.
Probab=98.49 E-value=5.8e-07 Score=102.31 Aligned_cols=43 Identities=14% Similarity=0.271 Sum_probs=36.5
Q ss_pred CCCCeEEecCCCCCCeEEccCCcccCCCCCCCCCCCccCCCCCCCCccCcCccceeeEEEeCCCCCCCCcccchhhh
Q 002043 810 CKPCSWIHSDIMDDNVYMEPCCASSRSNGNAADTGPMVNGSINGYDEFGEAKSWHCSHIIDFSNLSIGDPIYDVIPI 886 (976)
Q Consensus 810 ~~~pv~iHgDl~~~NILv~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~~~~~~w~~sGIIDFgd~~iGDP~~Dlv~l 886 (976)
+..-+++|||||++||++.+. . ..||||+.+.+|+|.+|++.+
T Consensus 189 ~~~~~llHGDl~~gNi~~~~~---------------------------------~-~~~iD~e~~~~G~~~~Dlg~~ 231 (370)
T TIGR01767 189 ASAETLLHGDLHSGSIFVSEH---------------------------------E-TKVIDPEFAFYGPIGFDIGQF 231 (370)
T ss_pred cCcceeeeccCCcccEEEcCC---------------------------------C-CEEEcCcccccCchHhhHHHH
Confidence 367899999999999999652 1 249999999999999999655
No 50
>PRK12396 5-methylribose kinase; Reviewed
Probab=98.48 E-value=5.9e-07 Score=103.33 Aligned_cols=42 Identities=21% Similarity=0.309 Sum_probs=36.9
Q ss_pred CCCeEEecCCCCCCeEEccCCcccCCCCCCCCCCCccCCCCCCCCccCcCccceeeEEEeCCCCCCCCcccchhhh
Q 002043 811 KPCSWIHSDIMDDNVYMEPCCASSRSNGNAADTGPMVNGSINGYDEFGEAKSWHCSHIIDFSNLSIGDPIYDVIPI 886 (976)
Q Consensus 811 ~~pv~iHgDl~~~NILv~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~~~~~~w~~sGIIDFgd~~iGDP~~Dlv~l 886 (976)
..-++||||||+|||+|.++ =+-|||-+.+.+|+|.+|+..+
T Consensus 225 ~~~aLlHGDlHtGSI~v~~~----------------------------------~~kvIDpEFAfyGP~gFDiG~~ 266 (409)
T PRK12396 225 NAQALIHGDLHTGSVFVKND----------------------------------STKVIDPEFAFYGPMGYDIGNV 266 (409)
T ss_pred cchhhccCcCCCCCEEecCC----------------------------------ceEEEcccccccCCcHHHHHHH
Confidence 68899999999999999762 2579999999999999999654
No 51
>PF04655 APH_6_hur: Aminoglycoside/hydroxyurea antibiotic resistance kinase; InterPro: IPR006748 The aminoglycosides are a large group of biologically active bacterial secondary metabolites, best known for their antibiotic properties []. Aminoglycoside phosphotransferases achieve inactivation of these enzymes by phosphorylation, utilising ATP. Likewise, hydroxyurea is inactivated by phosphorylation of the hydroxy group in the hydroxylamine moiety.; GO: 0016773 phosphotransferase activity, alcohol group as acceptor, 0006468 protein phosphorylation, 0019748 secondary metabolic process
Probab=98.41 E-value=3.8e-06 Score=91.79 Aligned_cols=132 Identities=24% Similarity=0.359 Sum_probs=77.3
Q ss_pred EEEEecc-cCccchhhhhcCCHHHHHHHHHHHHHHHHHhhCCCCCCCCCCccccccCCCCCCCCCcccccccCCCCchhH
Q 002043 674 YIITKRC-KGKMFAQLRDALSGEDVLNLASFLGEQLRNLHLLPCPPFNESSLSDKLKTEPPFNNGFVEDVVDTSSVPAEW 752 (976)
Q Consensus 674 YiVm~rl-~G~~l~~v~~~Ls~ed~~~La~~LG~~L~~LHsip~p~~~~~~~~d~~~~g~~~~~~~~~~~~~~~~~~~~W 752 (976)
-|+|||+ +|.+|.++-. ..+...-...+++.+++||..+..+.+.. . ....+|
T Consensus 70 AlLLErl~~g~~L~~~~~---~g~d~~a~~i~a~l~~~L~~~~~~~~p~~---------l--------------~~l~~~ 123 (253)
T PF04655_consen 70 ALLLERLDPGRSLASLPR---EGDDDEATRIAAGLLRRLHRPAPEPLPSG---------L--------------PPLADW 123 (253)
T ss_pred hhhhhhccCCCchhhccc---ccCchHHHHHHHHHHHHHhCCCCCCCCcc---------c--------------hhHHHH
Confidence 6899999 7789987421 11234456778899999998765333210 0 012344
Q ss_pred HHHHHHHHHHHHHHHHHhhhcCCCCCHHHHHHHhhhCChhHHHHhhhhhhccCCccCCCCCeEEecCCCCCCeEEccCCc
Q 002043 753 EIFIRTLARKKKNLVNRLTAWGHPIPKALIDKVDEYIPDDFVKLLDIYQDENGLNKVCKPCSWIHSDIMDDNVYMEPCCA 832 (976)
Q Consensus 753 ~~~~~~l~~r~~~~~~~~~~wg~~lp~~l~e~l~~ylp~d~~~ll~~~~~e~~~~~~~~~pv~iHgDl~~~NILv~~~~~ 832 (976)
-..+..... +.++ ..+..+++...... .+|+.. ..+++++|||||.+|||-...
T Consensus 124 ~~~l~~~~~---------~~~~-~~~~~l~~~a~~~~----~~Ll~~----------~~~~~lLHGDLH~~NIL~~~~-- 177 (253)
T PF04655_consen 124 FARLFARAR---------ERAG-APPRRLVDAAAALA----RELLAS----------PGEEVLLHGDLHHGNILAAGR-- 177 (253)
T ss_pred HHHHHHHhH---------hhhc-cccHHHHHHHHHHH----HHHhcC----------CCcceeeccccchHhhhccCC--
Confidence 433332221 1122 23334444333322 222221 357799999999999998541
Q ss_pred ccCCCCCCCCCCCccCCCCCCCCccCcCccceeeEEEeCCCCCCCCcccchhhhccc
Q 002043 833 SSRSNGNAADTGPMVNGSINGYDEFGEAKSWHCSHIIDFSNLSIGDPIYDVIPIHLD 889 (976)
Q Consensus 833 ~~~~~~~~~~~~~~~~~~~~~~dg~~~~~~w~~sGIIDFgd~~iGDP~~Dlv~l~l~ 889 (976)
+.|. +|| =.-.+|||.||++.+...
T Consensus 178 ----------------------------~~Wl---aID-Pkgl~Gdp~yd~a~~l~n 202 (253)
T PF04655_consen 178 ----------------------------RGWL---AID-PKGLVGDPAYDLAPLLRN 202 (253)
T ss_pred ----------------------------CCce---EeC-CcccccccccCHHHHHhC
Confidence 2464 477 445689999999988554
No 52
>PF01633 Choline_kinase: Choline/ethanolamine kinase; InterPro: IPR002573 Choline kinase, (ATP:choline phosphotransferase, 2.7.1.32 from EC) belongs to the choline/ethanolamine kinase family. Ethanolamine and choline are major membrane phospholipids, in the form of glycerophosphoethanolamine and glycerophosphocholine. Ethanolamine is also a component of the glycosylphosphatidylinositol (GPI) anchor, which is necessary for cell-surface protein attachment []. The de novo synthesis of these phospholipids begins with the creation of phosphoethanolamine and phosphocholine by ethanolamine and choline kinases in the first step of the CDP-ethanolamine pathway [, ]. There are two putative choline/ethanolamine kinases (C/EKs) in the Trypanosoma brucei genome. Ethanolamine kinase has no choline kinase activity [] and its activity is inhibited by ADP []. Inositol supplementation represses ethanolamine kinase, decreasing the incorporation of ethanolamine into the CDP-ethanolamine pathway and into phosphatidylethanolamine and phosphatidylcholine []. ; GO: 0016773 phosphotransferase activity, alcohol group as acceptor; PDB: 3C5I_A 2IG7_A 3LQ3_A 3FEG_A 2QG7_E 3FI8_A 1NW1_A 3MES_A 3G15_A 2CKP_B ....
Probab=98.37 E-value=5e-07 Score=95.24 Aligned_cols=45 Identities=22% Similarity=0.424 Sum_probs=31.0
Q ss_pred CCCeEEecCCCCCCeEEccCCcccCCCCCCCCCCCccCCCCCCCCccCcCccceeeEEEeCCCCCCCCcccchhhhc
Q 002043 811 KPCSWIHSDIMDDNVYMEPCCASSRSNGNAADTGPMVNGSINGYDEFGEAKSWHCSHIIDFSNLSIGDPIYDVIPIH 887 (976)
Q Consensus 811 ~~pv~iHgDl~~~NILv~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~~~~~~w~~sGIIDFgd~~iGDP~~Dlv~l~ 887 (976)
.+-||.|+|++++|||++.. + .-.-+|||+-++++||++|++...
T Consensus 141 ~~~v~cHnDl~~~Nil~~~~------------------------~--------~~~~lIDfEya~~n~~~fDia~~f 185 (211)
T PF01633_consen 141 SPLVFCHNDLNPGNILINNK------------------------D--------GEVKLIDFEYAGYNDRAFDIANFF 185 (211)
T ss_dssp GGEEEE-S--SGGGEEETSS------------------------S--------SCEEE--GTT-EEEEHHHHHHHHH
T ss_pred CCceEeeccCccccEEeccC------------------------C--------CeEEEecHHHHhhccchhhHHHHH
Confidence 56899999999999999321 1 134799999999999999998763
No 53
>TIGR03724 arch_bud32 Kae1-associated kinase Bud32. Members of this protein family are the Bud32 protein associated with Kae1 (kinase-associated endopeptidase 1) in the Archaea. In many Archaeal genomes, Kae1 and Bud32 are fused. The complex is homologous to the Kae1 and Bud32 subunits of the eukaryotic KEOPS complex, an apparently ancient protein kinase-containing molecular machine.
Probab=98.32 E-value=4e-06 Score=86.84 Aligned_cols=60 Identities=25% Similarity=0.345 Sum_probs=41.8
Q ss_pred EEecCCCCCCeEEccCCcccCCCCCCCCCCCccCCCCCCCCccCcCccceeeEEEeCCCCCCCCcccchhhhc-c---cc
Q 002043 815 WIHSDIMDDNVYMEPCCASSRSNGNAADTGPMVNGSINGYDEFGEAKSWHCSHIIDFSNLSIGDPIYDVIPIH-L---DI 890 (976)
Q Consensus 815 ~iHgDl~~~NILv~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~~~~~~w~~sGIIDFgd~~iGDP~~Dlv~l~-l---~~ 890 (976)
++|||++|+||+++. .-..|||||.+..+++..|+..-. . .+
T Consensus 111 i~H~Dl~~~Nil~~~----------------------------------~~~~liDfg~a~~~~~~~~~~~~~~~~~~~~ 156 (199)
T TIGR03724 111 IVHGDLTTSNIIVRD----------------------------------DKLYLIDFGLGKYSDEIEDKAVDLHVLKRSL 156 (199)
T ss_pred eecCCCCcceEEEEC----------------------------------CcEEEEECCCCcCCCcHHhhhchHHHHHHHH
Confidence 489999999999962 134799999999999998875321 0 11
Q ss_pred c--CC--ChHHHHHHHHhcCCc
Q 002043 891 F--RG--DSSLFKQFLESYKLP 908 (976)
Q Consensus 891 f--~g--d~~l~~~fl~~Y~~~ 908 (976)
. .. ..+++..|+++|.-.
T Consensus 157 ~~~~~~~~~~~~~~fl~~Y~~~ 178 (199)
T TIGR03724 157 ESTHPDKAEELFEAFLEGYREE 178 (199)
T ss_pred hhhCchhHHHHHHHHHHHHHhh
Confidence 0 11 125677888888843
No 54
>PRK01723 3-deoxy-D-manno-octulosonic-acid kinase; Reviewed
Probab=98.19 E-value=1.5e-05 Score=86.29 Aligned_cols=33 Identities=24% Similarity=0.430 Sum_probs=27.4
Q ss_pred eEEecCCCCCCeEEccCCcccCCCCCCCCCCCccCCCCCCCCccCcCccceeeEEEeCCCCCCCCc
Q 002043 814 SWIHSDIMDDNVYMEPCCASSRSNGNAADTGPMVNGSINGYDEFGEAKSWHCSHIIDFSNLSIGDP 879 (976)
Q Consensus 814 v~iHgDl~~~NILv~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~~~~~~w~~sGIIDFgd~~iGDP 879 (976)
-++|+||+|+|||+++.. -..|||||.+.++-|
T Consensus 162 GI~HrDlkp~NILv~~~~---------------------------------~v~LIDfg~~~~~~~ 194 (239)
T PRK01723 162 GVYHADLNAHNILLDPDG---------------------------------KFWLIDFDRGELRTP 194 (239)
T ss_pred CCCCCCCCchhEEEcCCC---------------------------------CEEEEECCCcccCCC
Confidence 359999999999997521 358999999999876
No 55
>PF06293 Kdo: Lipopolysaccharide kinase (Kdo/WaaP) family; InterPro: IPR010440 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents lipopolysaccharide kinases which are related to protein kinases IPR000719 from INTERPRO. This family includes waaP (rfaP) gene product is required for the addition of phosphate to O-4 of the first heptose residue of the lipopolysaccharide (LPS) inner core region. It has previously been shown that WaaP is necessary for resistance to hydrophobic and polycationic antimicrobials in E. coli and that it is required for virulence in invasive strains of Salmonella enterica [].; GO: 0005524 ATP binding, 0016773 phosphotransferase activity, alcohol group as acceptor, 0009103 lipopolysaccharide biosynthetic process, 0016020 membrane
Probab=98.15 E-value=1.9e-05 Score=83.53 Aligned_cols=40 Identities=25% Similarity=0.361 Sum_probs=32.4
Q ss_pred cEEEEecccC-ccchhhhhc---CCHHHHHHHHHHHHHHHHHhh
Q 002043 673 PYIITKRCKG-KMFAQLRDA---LSGEDVLNLASFLGEQLRNLH 712 (976)
Q Consensus 673 pYiVm~rl~G-~~l~~v~~~---Ls~ed~~~La~~LG~~L~~LH 712 (976)
.|+||++++| .+|.++... ++.+.+..+..++|+++++||
T Consensus 92 s~lite~l~~~~~L~~~~~~~~~~~~~~~~~ll~~l~~~i~~lH 135 (206)
T PF06293_consen 92 SYLITEALPGAQDLRDLLQQWEQLDPSQRRELLRALARLIAKLH 135 (206)
T ss_pred EEEEEEeCCCcccHHHHHHhhcccchhhHHHHHHHHHHHHHHHH
Confidence 4999999999 578876654 667778888888888888888
No 56
>smart00256 FBOX A Receptor for Ubiquitination Targets.
Probab=98.12 E-value=3.8e-06 Score=65.07 Aligned_cols=40 Identities=35% Similarity=0.609 Sum_probs=38.8
Q ss_pred CCHHHHHHHHhcCCHHHHHHHHHHhHHHHHHccCchhHHH
Q 002043 24 IPDEIICSILEHLTPRDVGRLACVSSVMYIFCNEEPLWMS 63 (976)
Q Consensus 24 LPdEll~~Ils~L~~~dL~~L~~vsr~fy~~~~~d~LWr~ 63 (976)
||+|++..|+++|++.|+.++++|||.|+..+.++.+|+.
T Consensus 1 lP~~ll~~I~~~l~~~d~~~~~~vc~~~~~~~~~~~~~~~ 40 (41)
T smart00256 1 LPDEILEEILSKLPPKDLLRLRKVSRRWRSLIDSHDFWFK 40 (41)
T ss_pred CCHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhcChhhhhc
Confidence 7999999999999999999999999999999999999985
No 57
>PF02958 EcKinase: Ecdysteroid kinase; InterPro: IPR004119 This family includes proteins of unknown function. All known members of this group are proteins from drosophila and Caenorhabditis elegans.
Probab=98.02 E-value=2.6e-05 Score=86.21 Aligned_cols=49 Identities=20% Similarity=0.155 Sum_probs=39.2
Q ss_pred CCCCeEEecCCCCCCeEEccCCcccCCCCCCCCCCCccCCCCCCCCccCcCccceeeEEEeCCCCCCCCcccchhhh
Q 002043 810 CKPCSWIHSDIMDDNVYMEPCCASSRSNGNAADTGPMVNGSINGYDEFGEAKSWHCSHIIDFSNLSIGDPIYDVIPI 886 (976)
Q Consensus 810 ~~~pv~iHgDl~~~NILv~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~~~~~~w~~sGIIDFgd~~iGDP~~Dlv~l 886 (976)
....|++|||+|.+|||...+. +| .-.-+.+|||.-+.+|.|+.||+..
T Consensus 212 ~~~~vl~HGD~w~nNilf~~~~-----------------------~g-----~~~~~~liDfQ~~~~g~p~~Dl~~f 260 (294)
T PF02958_consen 212 EPFNVLCHGDFWTNNILFKYDD-----------------------DG-----KPIDVVLIDFQLARYGSPAIDLAYF 260 (294)
T ss_pred CCceEEEcCccCHHhEeEcccc-----------------------cc-----ccccceeeccccccCCCcHhHHHHH
Confidence 4789999999999999997532 11 1123589999999999999999764
No 58
>PRK10359 lipopolysaccharide core biosynthesis protein; Provisional
Probab=98.01 E-value=2.4e-05 Score=84.46 Aligned_cols=41 Identities=15% Similarity=0.388 Sum_probs=26.3
Q ss_pred hHHHHHHHHhhCCCCCCccccccccCCCCcceEEec----ceEEEEeecC
Q 002043 520 WLELLEEICNFHKLPTLTAEEKLPVGNGSNPVYLMA----DCVVKIFVEG 565 (976)
Q Consensus 520 w~~~~~~~~~~~~l~~~~~~~~~~~~~gs~pv~~v~----~~v~K~~~~~ 565 (976)
+.+.+.++++.. .-. ...+- ++|.+-||++. ++|||+|-+.
T Consensus 21 ~~~~~~~~l~~~-y~~---~~~l~-~~~f~~v~l~~~~~~~~iiKvf~~~ 65 (232)
T PRK10359 21 YKEIFDDFLSYN-IKT---IKVFR-NIDDTKVSLIDTDYGKYILKVFAPK 65 (232)
T ss_pred HHHHHHHHhhCc-eEE---EEEec-CCCceEEEEEecCCCcEEEEEechh
Confidence 445666666433 111 12334 67899999987 7999999743
No 59
>PF00646 F-box: F-box domain; InterPro: IPR001810 The F-box domain was first described as a sequence motif found in cyclin-F that interacts with the protein SKP1 [, ]. This relatively conserved structural motif is present in numerous proteins and serves as a link between a target protein and a ubiquitin-conjugating enzyme. The SCF complex (e.g., Skp1-Cullin-F-box) plays a similar role as an E3 ligase in the ubiquitin protein degradation pathway [, ]. Different F-box proteins as a part of SCF complex recruit particular substrates for ubiquitination through specific protein-protein interaction domains. Many mammalian F-box domains contain leucine-rich or WD-40 repeats (IPR001680 from INTERPRO). However, several F-box proteins either have other previously described domains such as Sec7 domain found in FBS protein or do not contain defined protein-protein interaction domains or motifs.; GO: 0005515 protein binding; PDB: 2E32_A 2E31_A 3V7D_B 1NEX_B 3MKS_D 3L2O_B.
Probab=97.97 E-value=4.6e-06 Score=67.36 Aligned_cols=45 Identities=36% Similarity=0.556 Sum_probs=39.8
Q ss_pred CCCCCHHHHHHHHhcCCHHHHHHHHHHhHHHHHHccCchhHHHHH
Q 002043 21 LKIIPDEIICSILEHLTPRDVGRLACVSSVMYIFCNEEPLWMSLC 65 (976)
Q Consensus 21 l~~LPdEll~~Ils~L~~~dL~~L~~vsr~fy~~~~~d~LWr~~~ 65 (976)
+..||+|++.+|+++|++.|+.++++|||.|+.++.+..+|+..+
T Consensus 3 ~~~LP~~il~~Il~~l~~~~~~~l~~vsk~~~~~~~~~~~~~~~~ 47 (48)
T PF00646_consen 3 LSDLPDEILQEILSYLDPKDLLRLSLVSKRWRSLVDSPRLWKKII 47 (48)
T ss_dssp HHHS-HHHHHHHHHTS-HHHHHHHCTT-HHHHHHHTTHHHHHHHH
T ss_pred HHHCCHHHHHHHHHHCcHHHHHHHHHHhhHHHHHHcCCCccHHHh
Confidence 567999999999999999999999999999999999999999875
No 60
>smart00587 CHK ZnF_C4 abd HLH domain containing kinases domain. subfamily of choline kinases
Probab=97.88 E-value=6.1e-05 Score=79.07 Aligned_cols=70 Identities=19% Similarity=0.195 Sum_probs=49.4
Q ss_pred CCCeEEecCCCCCCeEEccCCcccCCCCCCCCCCCccCCCCCCCCccCcCccceeeEEEeCCCCCCCCcccchhhhcccc
Q 002043 811 KPCSWIHSDIMDDNVYMEPCCASSRSNGNAADTGPMVNGSINGYDEFGEAKSWHCSHIIDFSNLSIGDPIYDVIPIHLDI 890 (976)
Q Consensus 811 ~~pv~iHgDl~~~NILv~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~~~~~~w~~sGIIDFgd~~iGDP~~Dlv~l~l~~ 890 (976)
...|++|||+|++||++..+. +| .-...+||||+.+.+|+|++|++.+....
T Consensus 118 ~~~vl~HgD~~~~N~~~~~~~-----------------------~~-----~~~~~~liDfq~~~~g~p~~Dl~~~l~~~ 169 (196)
T smart00587 118 EFNVLNHGDLWANNIMFKYDD-----------------------EG-----KPEDVALIDFQLSHYGSPAEDLHYFLLTS 169 (196)
T ss_pred CceEEeeCCCCccceeeccCC-----------------------CC-----CccceEEEecccCCcCChHHHHHHHHHhC
Confidence 578999999999999997521 11 11356999999999999999998664332
Q ss_pred cCCC--hHHHHHHHHhcCCc
Q 002043 891 FRGD--SSLFKQFLESYKLP 908 (976)
Q Consensus 891 f~gd--~~l~~~fl~~Y~~~ 908 (976)
...+ ...+..+++.|--.
T Consensus 170 ~~~~~r~~~~~~ll~~Y~~~ 189 (196)
T smart00587 170 LSVEIRREHFDELLKFYYET 189 (196)
T ss_pred CCHHHHHHHHHHHHHHHHHH
Confidence 2111 24566778877543
No 61
>KOG3021 consensus Predicted kinase [General function prediction only]
Probab=97.87 E-value=0.00024 Score=75.12 Aligned_cols=58 Identities=19% Similarity=0.263 Sum_probs=40.2
Q ss_pred CCCeEEecCCCCCCeEEccCCcccCCCCCCCCCCCccCCCCCCCCccCcCccceeeEEEeCCCCCCCCcccchhhhcccc
Q 002043 811 KPCSWIHSDIMDDNVYMEPCCASSRSNGNAADTGPMVNGSINGYDEFGEAKSWHCSHIIDFSNLSIGDPIYDVIPIHLDI 890 (976)
Q Consensus 811 ~~pv~iHgDl~~~NILv~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~~~~~~w~~sGIIDFgd~~iGDP~~Dlv~l~l~~ 890 (976)
-.|+++|||||.+||--+..+ .+ =|+| --+.+|++.+||...+ +
T Consensus 208 I~PaLlHGDLW~GNva~D~~~--------------------------------eP-iIfD-PasfYgh~Efefgia~--m 251 (313)
T KOG3021|consen 208 ILPALLHGDLWSGNVAEDGAG--------------------------------EP-IIFD-PASFYGHSEFEFGIAK--M 251 (313)
T ss_pred eehhhhccccccCcccccCCC--------------------------------Cc-eEeC-chhhcCCcHHHHHHHH--H
Confidence 579999999999996543211 22 2555 4457899999998876 4
Q ss_pred cCCChHHHHHHHHhcCC
Q 002043 891 FRGDSSLFKQFLESYKL 907 (976)
Q Consensus 891 f~gd~~l~~~fl~~Y~~ 907 (976)
|.|=. +.|..+|--
T Consensus 252 fGgf~---~sF~naY~k 265 (313)
T KOG3021|consen 252 FGGFT---QSFYNAYHK 265 (313)
T ss_pred hCCCc---HHHHHHHhh
Confidence 45544 367888863
No 62
>PRK09605 bifunctional UGMP family protein/serine/threonine protein kinase; Validated
Probab=97.85 E-value=7.5e-05 Score=90.00 Aligned_cols=60 Identities=23% Similarity=0.312 Sum_probs=43.7
Q ss_pred EEecCCCCCCeEEccCCcccCCCCCCCCCCCccCCCCCCCCccCcCccceeeEEEeCCCCCCCCcccchhhhcc---ccc
Q 002043 815 WIHSDIMDDNVYMEPCCASSRSNGNAADTGPMVNGSINGYDEFGEAKSWHCSHIIDFSNLSIGDPIYDVIPIHL---DIF 891 (976)
Q Consensus 815 ~iHgDl~~~NILv~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~~~~~~w~~sGIIDFgd~~iGDP~~Dlv~l~l---~~f 891 (976)
++|+|++|+|||++. + ++ -|||||.+..+|+..|.+.... ..+
T Consensus 449 iiHrDlkp~NILl~~--------------------------~-------~~-~liDFGla~~~~~~~d~a~~l~~~~~~~ 494 (535)
T PRK09605 449 IVHGDLTTSNFIVRD--------------------------D-------RL-YLIDFGLGKYSDLIEDKAVDLHVLKQSL 494 (535)
T ss_pred CccCCCChHHEEEEC--------------------------C-------cE-EEEeCcccccCCchHhhhhhHHHHHHHh
Confidence 589999999999943 1 34 4999999999999998755221 111
Q ss_pred C----CChHHHHHHHHhcCCc
Q 002043 892 R----GDSSLFKQFLESYKLP 908 (976)
Q Consensus 892 ~----gd~~l~~~fl~~Y~~~ 908 (976)
. ...+.++.|+++|+..
T Consensus 495 ~~~~~~~~~~~~~fl~gY~~~ 515 (535)
T PRK09605 495 ESTHYDFEELWEAFLEGYRET 515 (535)
T ss_pred cCCCCCHHHHHHHHHHhhccC
Confidence 1 1236888999999864
No 63
>TIGR02457 TreS_Cterm trehalose synthase-fused probable maltokinase. Three pathways for the biosynthesis of trehalose, an osmoprotectant that in some species is also a precursor of certain cell wall glycolipids. Trehalose synthase, TreS, can interconvert maltose and trehalose, but while the equilibrium may favor trehalose, physiological concentrations of trehalose may be much greater than that of maltose and TreS may act largely in its degradation. This model describes a domain found only as a C-terminal fusion to TreS proteins. The most closely related proteins outside this family, Pep2 of Streptomyces coelicolor and Mak1 of Actinoplanes missouriensis, have known maltokinase activity. We suggest this domain acts as a maltokinase and helps drive conversion of trehalose to maltose.
Probab=97.70 E-value=0.00043 Score=83.01 Aligned_cols=47 Identities=28% Similarity=0.442 Sum_probs=35.9
Q ss_pred CCCCcceEEec-ceEEEEee--cCCcccccccchhHHHHHHHHHhhCCCCCcccccceec
Q 002043 545 GNGSNPVYLMA-DCVVKIFV--EGGFESSIYGLGTELEFYSLLAKVNSPLKNYIPDVLAS 601 (976)
Q Consensus 545 ~~gs~pv~~v~-~~v~K~~~--~~~~~~s~~~~~~e~~~y~~l~~~~~~l~~~~P~~~~~ 601 (976)
+.=||...++| .+|||+|= +.|.- -|+|.-+.|.+++. .+||.++.+
T Consensus 175 ~EQSNtSi~~g~~~ilKlyRrl~~G~n-------Pe~E~~r~Lte~gf---~~vP~llG~ 224 (528)
T TIGR02457 175 AEQSNSSLVVGDRVVLKLYRKVEPGIN-------PEIEMGRYLTAAGY---ANIPPLLGS 224 (528)
T ss_pred CCcCceEEEECCEEEEEEecccCCCCC-------cchHHHHHHHhCCC---ccCCcccEE
Confidence 44599999999 79999998 33433 56776777877554 899999976
No 64
>cd05145 RIO1_like RIO kinase family; RIO1, RIO3 and similar proteins, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. In addition, RIO3 is present in multicellular eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle pro
Probab=97.60 E-value=0.00054 Score=71.27 Aligned_cols=15 Identities=20% Similarity=0.497 Sum_probs=13.6
Q ss_pred eEEecCCCCCCeEEc
Q 002043 814 SWIHSDIMDDNVYME 828 (976)
Q Consensus 814 v~iHgDl~~~NILv~ 828 (976)
-++|+|++|+||+++
T Consensus 138 givHrDlkP~NIll~ 152 (190)
T cd05145 138 GLVHGDLSEYNILYH 152 (190)
T ss_pred CEecCCCChhhEEEE
Confidence 469999999999996
No 65
>COG3178 Predicted phosphotransferase related to Ser/Thr protein kinases [General function prediction only]
Probab=97.55 E-value=0.00013 Score=80.25 Aligned_cols=67 Identities=21% Similarity=0.259 Sum_probs=51.5
Q ss_pred CCCeEEecCCCCCCeEEccCCcccCCCCCCCCCCCccCCCCCCCCccCcCccceeeEEEeCCCCCCCCcccchhhhcccc
Q 002043 811 KPCSWIHSDIMDDNVYMEPCCASSRSNGNAADTGPMVNGSINGYDEFGEAKSWHCSHIIDFSNLSIGDPIYDVIPIHLDI 890 (976)
Q Consensus 811 ~~pv~iHgDl~~~NILv~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~~~~~~w~~sGIIDFgd~~iGDP~~Dlv~l~l~~ 890 (976)
.+-|++|.|+|+.|||..... +| .-++ |||||-|+.||.++||++++..+-
T Consensus 198 ~~~vlvhRDfh~~NLmw~~~~-----------------------~g-----~~rv-GvlDFQDA~iGP~aYDvasL~~DA 248 (351)
T COG3178 198 QPKVLVHRDFHSRNLMWTADR-----------------------AG-----ADRV-GVLDFQDALIGPIAYDVASLLRDA 248 (351)
T ss_pred CCceeeeccccCccceecCCc-----------------------cC-----CCCC-ceeehhhhhcCcchhhHHHHHhhc
Confidence 689999999999999997632 11 1144 999999999999999999998875
Q ss_pred cCC-ChHHHHHHHHhcC
Q 002043 891 FRG-DSSLFKQFLESYK 906 (976)
Q Consensus 891 f~g-d~~l~~~fl~~Y~ 906 (976)
+-. .+++-++.+..|-
T Consensus 249 rvt~~pe~~~~~l~rY~ 265 (351)
T COG3178 249 RVTWSPERELALLDRYW 265 (351)
T ss_pred cccCCHHHHHHHHHHHH
Confidence 433 3366666666664
No 66
>PRK15123 lipopolysaccharide core heptose(I) kinase RfaP; Provisional
Probab=97.53 E-value=0.001 Score=73.56 Aligned_cols=66 Identities=15% Similarity=0.076 Sum_probs=41.4
Q ss_pred EecCCCCCCeEEccCCcccCCCCCCCCCCCccCCCCCCCCccCcCccceeeEEEeCCCCCC--C----Ccccchhhhccc
Q 002043 816 IHSDIMDDNVYMEPCCASSRSNGNAADTGPMVNGSINGYDEFGEAKSWHCSHIIDFSNLSI--G----DPIYDVIPIHLD 889 (976)
Q Consensus 816 iHgDl~~~NILv~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~~~~~~w~~sGIIDFgd~~i--G----DP~~Dlv~l~l~ 889 (976)
+||||+++|||++... . ..+ +.++ ..+|||+.+.+ + ....|+..++..
T Consensus 160 ~HgDL~~~NiLl~~~~-------------------~-~~~-----~~~~-~~LIDl~r~~~~~~~~~~~r~~dL~~L~~s 213 (268)
T PRK15123 160 NHRDCYICHFLLHLPF-------------------P-GRE-----EDLK-LSVIDLHRAQIRARVPRRWRDKDLAGLYFS 213 (268)
T ss_pred ccCCCChhhEEEeccc-------------------c-CCC-----CCce-EEEEECCcccccCCCChHHHHHHHHHHHHH
Confidence 8999999999997420 0 000 1234 49999999854 2 334788888654
Q ss_pred c--cCCChHHHHHHHHhcCC
Q 002043 890 I--FRGDSSLFKQFLESYKL 907 (976)
Q Consensus 890 ~--f~gd~~l~~~fl~~Y~~ 907 (976)
. +.=...-...|+.+|.-
T Consensus 214 ~~~~~ls~~d~~~fl~~Y~~ 233 (268)
T PRK15123 214 AMDIGLTQRDILRFLRVYFG 233 (268)
T ss_pred hcccCCCHHHHHHHHHHHhC
Confidence 2 11122344568888875
No 67
>cd00180 PKc Catalytic domain of Protein Kinases. Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which
Probab=97.45 E-value=0.00069 Score=67.89 Aligned_cols=51 Identities=25% Similarity=0.307 Sum_probs=31.2
Q ss_pred CCC-CcceEEec------ceEEEEeecCCcccccccchhHHHHHHHHHhhCCCCCcccccceec
Q 002043 545 GNG-SNPVYLMA------DCVVKIFVEGGFESSIYGLGTELEFYSLLAKVNSPLKNYIPDVLAS 601 (976)
Q Consensus 545 ~~g-s~pv~~v~------~~v~K~~~~~~~~~s~~~~~~e~~~y~~l~~~~~~l~~~~P~~~~~ 601 (976)
|+| ++.||.+- .++||++...........+..|++.+..+. . .++|.++..
T Consensus 2 ~~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~e~~~~~~l~---~---~~i~~~~~~ 59 (215)
T cd00180 2 GEGGFGTVYLARDKKTGKKVAIKIIKKEDSSSLLEELLREIEILKKLN---H---PNIVKLYGV 59 (215)
T ss_pred CcCCceEEEEEEecCCCcEEEEEEeccccchhHHHHHHHHHHHHHhcC---C---CCeeeEeee
Confidence 444 77888885 499999995544312233557777555442 2 466666655
No 68
>PRK12274 serine/threonine protein kinase; Provisional
Probab=97.41 E-value=0.0013 Score=70.37 Aligned_cols=61 Identities=18% Similarity=0.234 Sum_probs=41.1
Q ss_pred EEecCC-CCCCeEEccCCcccCCCCCCCCCCCccCCCCCCCCccCcCccceeeEEEeCCCCCCCCcccchhhhcccccCC
Q 002043 815 WIHSDI-MDDNVYMEPCCASSRSNGNAADTGPMVNGSINGYDEFGEAKSWHCSHIIDFSNLSIGDPIYDVIPIHLDIFRG 893 (976)
Q Consensus 815 ~iHgDl-~~~NILv~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~~~~~~w~~sGIIDFgd~~iGDP~~Dlv~l~l~~f~g 893 (976)
++|+|| +|+|||++++ | + .-|||||.+...+|-..+.-+ +...
T Consensus 112 IvHrDL~kp~NILv~~~-------------------------g-------~-i~LIDFG~A~~~~~~~~~~r~---L~~r 155 (218)
T PRK12274 112 VAHNDLAKEANWLVQED-------------------------G-------S-PAVIDFQLAVRGNPRARWMRL---LARE 155 (218)
T ss_pred CccCCCCCcceEEEcCC-------------------------C-------C-EEEEECCCceecCCcchHHHH---HHHH
Confidence 599999 6999999652 2 3 369999999998876553222 2235
Q ss_pred ChHHHHHHHHhcCCcccc
Q 002043 894 DSSLFKQFLESYKLPLVR 911 (976)
Q Consensus 894 d~~l~~~fl~~Y~~~~~~ 911 (976)
|..-+-.+++.|.-...+
T Consensus 156 Dl~~llk~~~~y~~~~l~ 173 (218)
T PRK12274 156 DLRHLLKHKRMYCPAALT 173 (218)
T ss_pred HHHHHHHHHHhcCCCCCC
Confidence 565444555667765443
No 69
>KOG3087 consensus Serine/threonine protein kinase [General function prediction only]
Probab=97.37 E-value=0.001 Score=69.28 Aligned_cols=63 Identities=25% Similarity=0.397 Sum_probs=43.5
Q ss_pred EEecCCCCCCeEEccCCcccCCCCCCCCCCCccCCCCCCCCccCcCccceeeEEEeCCCCCCC----Ccccchhhhcc--
Q 002043 815 WIHSDIMDDNVYMEPCCASSRSNGNAADTGPMVNGSINGYDEFGEAKSWHCSHIIDFSNLSIG----DPIYDVIPIHL-- 888 (976)
Q Consensus 815 ~iHgDl~~~NILv~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~~~~~~w~~sGIIDFgd~~iG----DP~~Dlv~l~l-- 888 (976)
+|||||+-.||++.+++ .+|. ..+||||-+++- |-.-||..+--
T Consensus 134 iiHGDLTTSNill~~~~-----------------------------~~~~-~~lIdfgls~~s~~~EDKgVDLYVlErA~ 183 (229)
T KOG3087|consen 134 IIHGDLTTSNILLRSDG-----------------------------NQIT-PILIDFGLSSVSRLPEDKGVDLYVLERAV 183 (229)
T ss_pred eecccccccceEEecCC-----------------------------CcCc-eEEEeecchhcccCcccccceeeeehHhH
Confidence 39999999999998742 2343 389999999885 44555543321
Q ss_pred -cccCCChHHHHHHHHhcCC
Q 002043 889 -DIFRGDSSLFKQFLESYKL 907 (976)
Q Consensus 889 -~~f~gd~~l~~~fl~~Y~~ 907 (976)
+--..-..++..|+++|..
T Consensus 184 lsTh~~~~~~fe~~~~~Y~~ 203 (229)
T KOG3087|consen 184 LSTHDKKALLFEGFLEGYRA 203 (229)
T ss_pred hccCcccHHHHHHHHHHHHh
Confidence 1222334788999999993
No 70
>COG3642 Mn2+-dependent serine/threonine protein kinase [Signal transduction mechanisms]
Probab=97.37 E-value=0.00076 Score=70.36 Aligned_cols=62 Identities=24% Similarity=0.390 Sum_probs=44.0
Q ss_pred EecCCCCCCeEEccCCcccCCCCCCCCCCCccCCCCCCCCccCcCccceeeEEEeCCCCCCCCcccchhh-hccc-----
Q 002043 816 IHSDIMDDNVYMEPCCASSRSNGNAADTGPMVNGSINGYDEFGEAKSWHCSHIIDFSNLSIGDPIYDVIP-IHLD----- 889 (976)
Q Consensus 816 iHgDl~~~NILv~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~~~~~~w~~sGIIDFgd~~iGDP~~Dlv~-l~l~----- 889 (976)
+||||+..||++..+ + ..+||||-+.+-+-..|.+. +|+.
T Consensus 114 vHGDLTtsNiIl~~~---------------------------------~-i~~IDfGLg~~s~~~Ed~aVDl~Vleral~ 159 (204)
T COG3642 114 VHGDLTTSNIILSGG---------------------------------R-IYFIDFGLGEFSDEVEDKAVDLHVLERALE 159 (204)
T ss_pred ecCCCccceEEEeCC---------------------------------c-EEEEECCcccccccHHhhhchHHHHHHHHH
Confidence 899999999999641 2 59999999999877777632 2221
Q ss_pred -ccCCChHHHHHHHHhcCCcccc
Q 002043 890 -IFRGDSSLFKQFLESYKLPLVR 911 (976)
Q Consensus 890 -~f~gd~~l~~~fl~~Y~~~~~~ 911 (976)
......+++.+|++||.-.+..
T Consensus 160 sth~~~e~l~~~f~~gY~~~~~~ 182 (204)
T COG3642 160 STHEKAEELFAAFLEGYREEFGE 182 (204)
T ss_pred hccccHHHHHHHHHHHHHHHhcc
Confidence 1222237888899999766543
No 71
>COG0510 ycfN Thiamine kinase and related kinases [Coenzyme transport and metabolism]
Probab=97.35 E-value=0.00059 Score=75.46 Aligned_cols=63 Identities=21% Similarity=0.431 Sum_probs=48.3
Q ss_pred CeEEecCCCCCCeEEccCCcccCCCCCCCCCCCccCCCCCCCCccCcCccceeeEEEeCCCCCCCCcccchhhhcccc-c
Q 002043 813 CSWIHSDIMDDNVYMEPCCASSRSNGNAADTGPMVNGSINGYDEFGEAKSWHCSHIIDFSNLSIGDPIYDVIPIHLDI-F 891 (976)
Q Consensus 813 pv~iHgDl~~~NILv~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~~~~~~w~~sGIIDFgd~~iGDP~~Dlv~l~l~~-f 891 (976)
-+++|+|++++|+|.++.+ ++ -+|||+-++.|||++|++.+.... +
T Consensus 153 ~v~cH~Dl~~~N~l~t~~~--------------------------------~l-~LIDWEyAg~~D~~~DLA~~~~e~~~ 199 (269)
T COG0510 153 LVPCHNDLNPGNLLLTDKG--------------------------------GL-FLIDWEYAGLNDPAFDLAALLSEYIF 199 (269)
T ss_pred eeeecCCCCccceEEcCCC--------------------------------cE-EEEecccCCCccHHHHHHHHHHHhcc
Confidence 7999999999999997622 34 899999999999999999875432 2
Q ss_pred CCC--hHHHHHHHHhcCCc
Q 002043 892 RGD--SSLFKQFLESYKLP 908 (976)
Q Consensus 892 ~gd--~~l~~~fl~~Y~~~ 908 (976)
.-. .+.....++.|+.+
T Consensus 200 ~~~~~~~~~~~~~~~~~~~ 218 (269)
T COG0510 200 NHNELEDLYSAYLEKYGFE 218 (269)
T ss_pred chhHHHHHHHHHHHhCCch
Confidence 221 13667777777766
No 72
>smart00090 RIO RIO-like kinase.
Probab=97.26 E-value=0.0025 Score=69.17 Aligned_cols=14 Identities=21% Similarity=0.565 Sum_probs=13.3
Q ss_pred EEecCCCCCCeEEc
Q 002043 815 WIHSDIMDDNVYME 828 (976)
Q Consensus 815 ~iHgDl~~~NILv~ 828 (976)
++|+|++|+||+++
T Consensus 170 iiH~Dikp~NIli~ 183 (237)
T smart00090 170 LVHGDLSEYNILVH 183 (237)
T ss_pred EEeCCCChhhEEEE
Confidence 79999999999996
No 73
>KOG1164 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=97.12 E-value=0.0036 Score=70.63 Aligned_cols=56 Identities=29% Similarity=0.386 Sum_probs=38.7
Q ss_pred cCC-CCcceEEec-------ceEEEEee-cCCcccccccchhHHHHHHHHHhhCCCCCcccccceeccc
Q 002043 544 VGN-GSNPVYLMA-------DCVVKIFV-EGGFESSIYGLGTELEFYSLLAKVNSPLKNYIPDVLASGI 603 (976)
Q Consensus 544 ~~~-gs~pv~~v~-------~~v~K~~~-~~~~~~s~~~~~~e~~~y~~l~~~~~~l~~~~P~~~~~g~ 603 (976)
+|. |+.-||.|. .+|+|+-. +.+...+ .+..|...+..|.. .+-..|+|.++..|.
T Consensus 26 iG~G~fG~V~~v~~~~~~~~~~a~K~e~~~~~~~~~--~l~~E~~vl~~l~~--~~~~~~~~~~~~~G~ 90 (322)
T KOG1164|consen 26 IGEGGFGAVYLVSDKSEKNKEYAKKLEKKELGSKPS--VLKIEIQVLKKLEK--KNGPSHFPKLLDHGR 90 (322)
T ss_pred ccccCCceEEEEEecCCCCeeEEEEEEEecccCCCc--cchhHHHHHHHHhh--hcCCCCCCEEEEecc
Confidence 344 599999998 27888888 3222221 37789997777764 233479999999874
No 74
>cd05144 RIO2_C RIO kinase family; RIO2, C-terminal catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO2 is present in archaea and eukaryotes. It contains an N-terminal winged helix (wHTH) domain and a C-terminal RIO kinase catalytic domain. The wHTH domain is primarily seen in DNA-binding proteins, although some wHTH dom
Probab=97.12 E-value=0.0039 Score=64.98 Aligned_cols=17 Identities=24% Similarity=0.442 Sum_probs=14.7
Q ss_pred CeEEecCCCCCCeEEcc
Q 002043 813 CSWIHSDIMDDNVYMEP 829 (976)
Q Consensus 813 pv~iHgDl~~~NILv~~ 829 (976)
.-++|+||+|+||++++
T Consensus 144 ~gi~H~Dl~p~Nill~~ 160 (198)
T cd05144 144 HGIIHGDLSEFNILVDD 160 (198)
T ss_pred CCCCcCCCCcccEEEcC
Confidence 34799999999999975
No 75
>TIGR02905 spore_yutH spore coat protein YutH. Members of this family are homologs of the Bacillus subtilis spore coat protein CotS. Members of this family, designated YutH, are found only in the family Bacillaceae from among the endospore-forming members of the Firmicutes branch of the Bacteria.
Probab=97.03 E-value=0.026 Score=63.66 Aligned_cols=167 Identities=11% Similarity=0.082 Sum_probs=92.4
Q ss_pred ccEEEEecccCccchhhhhcCCHHHHHHHHHHHHHHHHHhhCCCCCCCCCCccccccCCCCCCCCCcccccccCCCCchh
Q 002043 672 WPYIITKRCKGKMFAQLRDALSGEDVLNLASFLGEQLRNLHLLPCPPFNESSLSDKLKTEPPFNNGFVEDVVDTSSVPAE 751 (976)
Q Consensus 672 WpYiVm~rl~G~~l~~v~~~Ls~ed~~~La~~LG~~L~~LHsip~p~~~~~~~~d~~~~g~~~~~~~~~~~~~~~~~~~~ 751 (976)
-||+||+|++|..-.+ ..+|+.|++||.... ++... + ..+ ......+..
T Consensus 80 ~~y~L~~w~~~~~~~~--------------~~~~~~LA~lH~as~-~f~~~--~--------~~~------~~~~~~~~~ 128 (313)
T TIGR02905 80 VSYYLFKAPEFNERRG--------------VDLGRELATFHKRGR-QYPRP--I--------WKK------SRIGQWKEL 128 (313)
T ss_pred EEEEEEeCCCcccchh--------------HHHHHHHHHHHHhcC-CCCCC--c--------ccc------ccccccHHH
Confidence 6899999998876322 178888899998743 11110 0 000 000123345
Q ss_pred HHHHHHHHHHHHHHHHHHhhhcCCCCCHHHHHHHhhhCChhHHHHhhhhhhccCCc--cCCCCCeEEecCCCCCCeEEcc
Q 002043 752 WEIFIRTLARKKKNLVNRLTAWGHPIPKALIDKVDEYIPDDFVKLLDIYQDENGLN--KVCKPCSWIHSDIMDDNVYMEP 829 (976)
Q Consensus 752 W~~~~~~l~~r~~~~~~~~~~wg~~lp~~l~e~l~~ylp~d~~~ll~~~~~e~~~~--~~~~~pv~iHgDl~~~NILv~~ 829 (976)
|...++.|.+.+.-+..... -.+...-.++.++.|+.. +...+...+...-.. ......+++|||+...|++ .+
T Consensus 129 ~~k~~~el~~~~~~~~~~~~--~s~Fd~~fl~~~d~~~~~-a~~ai~~l~~s~y~~~~~~~~~~~lCH~d~~~hn~l-~~ 204 (313)
T TIGR02905 129 WAKRLDQLEDWWQSLLAQGP--QTLFDEQFLETFPYYLGL-TENAIQYAADTELDDEPGLADSGTICHERFGETTWL-ER 204 (313)
T ss_pred HHHHHHHHHHHHHHHHhcCC--CChHHHHHHHHhHHHHHH-HHHHHHHHHHccchhhhhccccCccccCccCccccc-cC
Confidence 55555555533322221111 123333456666667632 222233222100111 1134779999999999977 32
Q ss_pred CCcccCCCCCCCCCCCccCCCCCCCCccCcCccceeeEEEeCCCCCCCCcccchhhhccccc-C---CChHHHHHHHHhc
Q 002043 830 CCASSRSNGNAADTGPMVNGSINGYDEFGEAKSWHCSHIIDFSNLSIGDPIYDVIPIHLDIF-R---GDSSLFKQFLESY 905 (976)
Q Consensus 830 ~~~~~~~~~~~~~~~~~~~~~~~~~dg~~~~~~w~~sGIIDFgd~~iGDP~~Dlv~l~l~~f-~---gd~~l~~~fl~~Y 905 (976)
+ -..+|+|. ..++-|+.||.....-+. . -+-+....+|++|
T Consensus 205 ~----------------------------------~~~~i~~d-~~~D~~~~DL~~firk~~~k~~~~~~~~~~~~l~~Y 249 (313)
T TIGR02905 205 G----------------------------------GLIKPPTE-WVYDHPARDLAEWIRERYMGEIRQNQRAIASFLQEY 249 (313)
T ss_pred C----------------------------------CeEecccc-cccccchhHHHHHHHHHHHHhccccHHHHHHHHHHh
Confidence 1 23677777 569999999987644423 2 2346788899999
Q ss_pred CCc
Q 002043 906 KLP 908 (976)
Q Consensus 906 ~~~ 908 (976)
..-
T Consensus 250 ~~~ 252 (313)
T TIGR02905 250 EQA 252 (313)
T ss_pred hhc
Confidence 854
No 76
>cd05119 RIO RIO kinase family, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases present in archaea, bacteria and eukaryotes. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. RIO kinases contain a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. Most organisms contain at least two RIO kinases, RIO1 and RIO2. A third protein, RIO3, is present in multicellular eukaryotes. In yeast, RIO1 and RIO2 are essential for survival. They funct
Probab=97.00 E-value=0.0056 Score=62.62 Aligned_cols=16 Identities=19% Similarity=0.561 Sum_probs=14.5
Q ss_pred CeEEecCCCCCCeEEc
Q 002043 813 CSWIHSDIMDDNVYME 828 (976)
Q Consensus 813 pv~iHgDl~~~NILv~ 828 (976)
+-++|+||+|+||+++
T Consensus 134 ~~ivH~Dl~p~Nili~ 149 (187)
T cd05119 134 AGLVHGDLSEYNILVD 149 (187)
T ss_pred cCcCcCCCChhhEEEE
Confidence 5679999999999996
No 77
>cd05147 RIO1_euk RIO kinase family; eukaryotic RIO1, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. This subfamily is composed of RIO1 proteins from eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle progression and c
Probab=96.89 E-value=0.0021 Score=67.27 Aligned_cols=15 Identities=20% Similarity=0.459 Sum_probs=13.6
Q ss_pred EEecCCCCCCeEEcc
Q 002043 815 WIHSDIMDDNVYMEP 829 (976)
Q Consensus 815 ~iHgDl~~~NILv~~ 829 (976)
++|+|++|+|||+++
T Consensus 139 iiHrDlkP~NIli~~ 153 (190)
T cd05147 139 LVHADLSEYNLLYHD 153 (190)
T ss_pred cccCCCCHHHEEEEC
Confidence 699999999999963
No 78
>cd05598 STKc_LATS Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS was originally identified in Drosophila using a screen for genes whose inactivation led to overproliferation of cells. In tetrapods, there are two LATS isoforms, LATS1 and LATS2. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. LATS functions as a tumor suppressor and is implicated in cell cycle regulation.
Probab=96.75 E-value=0.0064 Score=69.42 Aligned_cols=16 Identities=38% Similarity=0.756 Sum_probs=14.3
Q ss_pred eEEecCCCCCCeEEcc
Q 002043 814 SWIHSDIMDDNVYMEP 829 (976)
Q Consensus 814 v~iHgDl~~~NILv~~ 829 (976)
-++|+||+|+|||++.
T Consensus 121 ~ivHrDlkp~Nill~~ 136 (376)
T cd05598 121 GFIHRDIKPDNILIDR 136 (376)
T ss_pred CeEeCCCCHHHEEECC
Confidence 4799999999999975
No 79
>cd05626 STKc_LATS2 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 2. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. LATS2 is an essential mitotic regulator responsible for coordinating accurate cytokinesis completion and governing the stabilization of other mitotic regulators. It is also critical in the maintenance of proper chromosome number, genomic stability, mitotic fidelity, and the integrity of centrosome duplication. Downregulation of LATS2 is associated with po
Probab=96.71 E-value=0.0059 Score=70.05 Aligned_cols=16 Identities=38% Similarity=0.727 Sum_probs=14.3
Q ss_pred eEEecCCCCCCeEEcc
Q 002043 814 SWIHSDIMDDNVYMEP 829 (976)
Q Consensus 814 v~iHgDl~~~NILv~~ 829 (976)
-++|+||+|+|||++.
T Consensus 121 givHrDlKp~Nili~~ 136 (381)
T cd05626 121 GFIHRDIKPDNILIDL 136 (381)
T ss_pred CeeecCCcHHHEEECC
Confidence 4799999999999965
No 80
>cd05600 STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis.
Probab=96.67 E-value=0.0069 Score=67.88 Aligned_cols=17 Identities=24% Similarity=0.446 Sum_probs=14.5
Q ss_pred ccEEEEecccCccchhh
Q 002043 672 WPYIITKRCKGKMFAQL 688 (976)
Q Consensus 672 WpYiVm~rl~G~~l~~v 688 (976)
..|+||++++|.+|.+.
T Consensus 75 ~~~lv~e~~~g~~L~~~ 91 (333)
T cd05600 75 YLYLAMEYVPGGDFRTL 91 (333)
T ss_pred EEEEEEeCCCCCCHHHH
Confidence 46999999999988764
No 81
>cd05628 STKc_NDR1 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 1. Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. NDR1 is highly expressed in thymus, mus
Probab=96.67 E-value=0.0068 Score=69.02 Aligned_cols=16 Identities=38% Similarity=0.762 Sum_probs=14.3
Q ss_pred eEEecCCCCCCeEEcc
Q 002043 814 SWIHSDIMDDNVYMEP 829 (976)
Q Consensus 814 v~iHgDl~~~NILv~~ 829 (976)
-++|+||+|+|||++.
T Consensus 121 givHrDlKp~NILi~~ 136 (363)
T cd05628 121 GFIHRDIKPDNLLLDS 136 (363)
T ss_pred CeEecCCCHHHeEECC
Confidence 4699999999999965
No 82
>cd05629 STKc_NDR_like_fungal Catalytic domain of Fungal Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), NDR kinase subfamily, fungal NDR-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group is composed of fungal NDR-like proteins including Saccharomyces cerevisiae CBK1 (or CBK1p), Schizosaccharomyces pombe Orb6 (or Orb6p), Ustilago maydis Ukc1 (or Ukc1p), and Neurospora crassa Cot1. Like NDR kinase, group members contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. CBK1 is an essential component in the RAM (regulation of
Probab=96.66 E-value=0.0078 Score=68.80 Aligned_cols=17 Identities=35% Similarity=0.683 Sum_probs=14.7
Q ss_pred CeEEecCCCCCCeEEcc
Q 002043 813 CSWIHSDIMDDNVYMEP 829 (976)
Q Consensus 813 pv~iHgDl~~~NILv~~ 829 (976)
.-++|+||+|+|||++.
T Consensus 120 ~givHrDlkp~NIll~~ 136 (377)
T cd05629 120 LGFIHRDIKPDNILIDR 136 (377)
T ss_pred CCeeccCCCHHHEEECC
Confidence 34799999999999965
No 83
>cd05594 STKc_PKB_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B alpha. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, alpha (or Akt1) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-alpha is predominantly expressed in endothelial cells. It is critical for the regulation of angiogenesis and the maintenance of vascular integrity. It also plays a role in adipocyte differentiation. Mice deficien
Probab=96.64 E-value=0.013 Score=65.51 Aligned_cols=16 Identities=13% Similarity=0.295 Sum_probs=14.4
Q ss_pred eEEecCCCCCCeEEcc
Q 002043 814 SWIHSDIMDDNVYMEP 829 (976)
Q Consensus 814 v~iHgDl~~~NILv~~ 829 (976)
-++|+||+|+|||++.
T Consensus 116 ~ivHrDikp~NIll~~ 131 (325)
T cd05594 116 NVVYRDLKLENLMLDK 131 (325)
T ss_pred CEEecCCCCCeEEECC
Confidence 4799999999999975
No 84
>COG2140 Thermophilic glucose-6-phosphate isomerase and related metalloenzymes [Carbohydrate transport and metabolism / General function prediction only]
Probab=96.62 E-value=0.0085 Score=63.33 Aligned_cols=65 Identities=20% Similarity=0.267 Sum_probs=53.3
Q ss_pred eecCCCCCcccccCCCCcc--cEEEEEEEEEEEEeCCCCCCCcceeeecCCCCCccccCCcchhhhhhhCCCCCCCCCCE
Q 002043 256 IGPQRSGASWHVDPALTSA--WNTLLCGRKRWALYPPGRVPLGVTVHVNEDDGDVNIETPSSLEWWLDFYPLLADDDKPI 333 (976)
Q Consensus 256 iGp~gSgT~lH~Dp~~t~a--wn~qI~GrKrW~LfPP~~~p~~v~~~~~~~~s~vd~~~Pdsl~W~l~~yP~l~~~~~~~ 333 (976)
.=++|+...+|++|+. +- |...|.|+=+.+|+.|.- ++.
T Consensus 86 ~~t~G~~~~~H~Hp~a-de~E~y~vi~G~g~m~v~~~~G--------------------------------------~~~ 126 (209)
T COG2140 86 FKTPGAMRELHYHPNA-DEPEIYYVLKGEGRMLVQKPEG--------------------------------------EAR 126 (209)
T ss_pred EecCCcccccccCCCC-CcccEEEEEeccEEEEEEcCCC--------------------------------------cEE
Confidence 3346777888999984 56 999999999999877651 235
Q ss_pred EEEEcCCCEEEeCCCCceeeEecCCc
Q 002043 334 ECTQLPGETIVVPSGWWHCILNLETT 359 (976)
Q Consensus 334 e~vL~PGDvLfVP~GWWH~V~NLd~S 359 (976)
.+.++|||++|||++|-|.++|.++.
T Consensus 127 v~~~~~Gd~iyVPp~~gH~t~N~Gd~ 152 (209)
T COG2140 127 VIAVRAGDVIYVPPGYGHYTINTGDE 152 (209)
T ss_pred EEEecCCcEEEeCCCcceEeecCCCC
Confidence 67789999999999999999999865
No 85
>KOG2120 consensus SCF ubiquitin ligase, Skp2 component [Posttranslational modification, protein turnover, chaperones]
Probab=96.60 E-value=0.0021 Score=70.92 Aligned_cols=47 Identities=28% Similarity=0.563 Sum_probs=43.3
Q ss_pred CCCCCCHHHHHHHHhcCCHHHHHHHHHHhHHHHHHccCchhHHHHHH
Q 002043 20 DLKIIPDEIICSILEHLTPRDVGRLACVSSVMYIFCNEEPLWMSLCL 66 (976)
Q Consensus 20 ~l~~LPdEll~~Ils~L~~~dL~~L~~vsr~fy~~~~~d~LWr~~~~ 66 (976)
.+..|||||++.||+-|...+|.+++.|||+||-+++++.+|..+=+
T Consensus 97 ~~~slpDEill~IFs~L~kk~LL~~~~VC~Rfyr~~~de~lW~~lDl 143 (419)
T KOG2120|consen 97 SWDSLPDEILLGIFSCLCKKELLKVSGVCKRFYRLASDESLWQTLDL 143 (419)
T ss_pred CcccCCHHHHHHHHHhccHHHHHHHHHHHHHHhhccccccceeeecc
Confidence 37899999999999999999999999999999999999999975433
No 86
>KOG1989 consensus ARK protein kinase family [Signal transduction mechanisms]
Probab=96.57 E-value=0.0078 Score=74.21 Aligned_cols=46 Identities=24% Similarity=0.559 Sum_probs=34.3
Q ss_pred CCCcc-EEEEecccCccchhhhh-----cCCHHHHHHHHHHHHHHHHHhhCC
Q 002043 669 NRIWP-YIITKRCKGKMFAQLRD-----ALSGEDVLNLASFLGEQLRNLHLL 714 (976)
Q Consensus 669 ~~~Wp-YiVm~rl~G~~l~~v~~-----~Ls~ed~~~La~~LG~~L~~LHsi 714 (976)
+..|. +++||||+|..|-+.+. .|++.+..+|..++.+-++.||.+
T Consensus 112 ~~~~EvllLmEyC~gg~Lvd~mn~Rlq~~lte~eVLkIf~dv~~AVa~mH~~ 163 (738)
T KOG1989|consen 112 NGVWEVLLLMEYCKGGSLVDFMNTRLQTRLTEDEVLKIFYDVCEAVAAMHYL 163 (738)
T ss_pred CceeEEEeehhhccCCcHHHHHHHHHhccCChHHHHHHHHHHHHHHHHHhcC
Confidence 33344 57899999877766443 677888888888888888888855
No 87
>cd05582 STKc_RSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase. Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylate
Probab=96.56 E-value=0.0097 Score=66.22 Aligned_cols=16 Identities=19% Similarity=0.422 Sum_probs=14.3
Q ss_pred eEEecCCCCCCeEEcc
Q 002043 814 SWIHSDIMDDNVYMEP 829 (976)
Q Consensus 814 v~iHgDl~~~NILv~~ 829 (976)
-++|+||+|+||+++.
T Consensus 118 ~i~H~dlkp~Nil~~~ 133 (318)
T cd05582 118 GIIYRDLKPENILLDE 133 (318)
T ss_pred CEecCCCCHHHeEECC
Confidence 4799999999999975
No 88
>cd05599 STKc_NDR_like Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplica
Probab=96.54 E-value=0.0079 Score=68.18 Aligned_cols=16 Identities=38% Similarity=0.771 Sum_probs=14.3
Q ss_pred eEEecCCCCCCeEEcc
Q 002043 814 SWIHSDIMDDNVYMEP 829 (976)
Q Consensus 814 v~iHgDl~~~NILv~~ 829 (976)
-++|+||+|+|||++.
T Consensus 121 ~ivH~Dlkp~NIl~~~ 136 (364)
T cd05599 121 GYIHRDIKPDNLLLDA 136 (364)
T ss_pred CeEeccCCHHHeEECC
Confidence 3699999999999975
No 89
>cd05627 STKc_NDR2 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 2. Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. In addition, NDR2 plays a role in regul
Probab=96.52 E-value=0.0098 Score=67.57 Aligned_cols=17 Identities=35% Similarity=0.686 Sum_probs=14.6
Q ss_pred CeEEecCCCCCCeEEcc
Q 002043 813 CSWIHSDIMDDNVYMEP 829 (976)
Q Consensus 813 pv~iHgDl~~~NILv~~ 829 (976)
.-++|+||+|+|||++.
T Consensus 120 ~givHrDLkp~NIli~~ 136 (360)
T cd05627 120 LGFIHRDIKPDNLLLDA 136 (360)
T ss_pred CCeEccCCCHHHEEECC
Confidence 34699999999999965
No 90
>cd06649 PKc_MEK2 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2. Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downst
Probab=96.51 E-value=0.017 Score=64.78 Aligned_cols=16 Identities=19% Similarity=0.474 Sum_probs=14.4
Q ss_pred eEEecCCCCCCeEEcc
Q 002043 814 SWIHSDIMDDNVYMEP 829 (976)
Q Consensus 814 v~iHgDl~~~NILv~~ 829 (976)
.++|+||+|+|||++.
T Consensus 124 ~ivH~dlkp~Nil~~~ 139 (331)
T cd06649 124 QIMHRDVKPSNILVNS 139 (331)
T ss_pred CEEcCCCChhhEEEcC
Confidence 4799999999999975
No 91
>cd05084 PTKc_Fes Catalytic domain of the Protein Tyrosine Kinase, Fes. Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular
Probab=96.48 E-value=0.021 Score=60.74 Aligned_cols=16 Identities=25% Similarity=0.409 Sum_probs=14.2
Q ss_pred eEEecCCCCCCeEEcc
Q 002043 814 SWIHSDIMDDNVYMEP 829 (976)
Q Consensus 814 v~iHgDl~~~NILv~~ 829 (976)
-++|+||+|+||++++
T Consensus 114 ~i~H~dl~p~nil~~~ 129 (252)
T cd05084 114 HCIHRDLAARNCLVTE 129 (252)
T ss_pred CccccccchheEEEcC
Confidence 3699999999999975
No 92
>cd05115 PTKc_Zap-70 Catalytic domain of the Protein Tyrosine Kinase, Zeta-chain-associated protein of 70kDa. Protein Tyrosine Kinase (PTK) family; Zeta-chain-associated protein of 70kDa (Zap-70); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Zap-70 is a member of the Syk subfamily of kinases, which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Zap-70 binds the phosphorylated ITAM (immunoreceptor tyr activation motif) sequences of the activated TCR zeta-chain through its SH2 domains, leading to its pho
Probab=96.48 E-value=0.021 Score=61.43 Aligned_cols=16 Identities=25% Similarity=0.559 Sum_probs=14.2
Q ss_pred eEEecCCCCCCeEEcc
Q 002043 814 SWIHSDIMDDNVYMEP 829 (976)
Q Consensus 814 v~iHgDl~~~NILv~~ 829 (976)
-++|+||+|+||+++.
T Consensus 115 ~i~H~dlkp~nil~~~ 130 (257)
T cd05115 115 NFVHRDLAARNVLLVN 130 (257)
T ss_pred CeeecccchheEEEcC
Confidence 3699999999999965
No 93
>cd05571 STKc_PKB Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having be
Probab=96.44 E-value=0.015 Score=64.95 Aligned_cols=16 Identities=13% Similarity=0.287 Sum_probs=14.3
Q ss_pred eEEecCCCCCCeEEcc
Q 002043 814 SWIHSDIMDDNVYMEP 829 (976)
Q Consensus 814 v~iHgDl~~~NILv~~ 829 (976)
-++|+||+|+|||++.
T Consensus 115 ~ivHrDlkp~NIll~~ 130 (323)
T cd05571 115 DVVYRDLKLENLMLDK 130 (323)
T ss_pred CeEeCCCCHHHEEECC
Confidence 4699999999999975
No 94
>cd05625 STKc_LATS1 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 1. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. Promoter methylation, loss of heterozygosity, and missense mutations targeting the LATS1 gene have also been found in human sarcomas and ovarian cancers. In addition, decreased expression of LATS1 is associated with an aggressive phenotype an
Probab=96.44 E-value=0.012 Score=67.51 Aligned_cols=16 Identities=38% Similarity=0.756 Sum_probs=14.4
Q ss_pred eEEecCCCCCCeEEcc
Q 002043 814 SWIHSDIMDDNVYMEP 829 (976)
Q Consensus 814 v~iHgDl~~~NILv~~ 829 (976)
-++|+||+|+|||++.
T Consensus 121 ~ivHrDlKp~NILl~~ 136 (382)
T cd05625 121 GFIHRDIKPDNILIDR 136 (382)
T ss_pred CeecCCCCHHHEEECC
Confidence 4799999999999975
No 95
>cd05601 STKc_CRIK Catalytic domain of the Protein Serine/Threonine Kinase, Citron Rho-interacting kinase. Serine/Threonine Kinases (STKs), Citron Rho-interacting kinase (CRIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CRIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CRIK is also called citron kinase. It contains a catalytic domain, a central coiled-coil domain, and a C-terminal region containing a Rho-binding domain (RBD), a zinc finger, and a pleckstrin homology (PH) domain, in addition to other motifs. CRIK, an effector of the small GTPase Rho, plays an important function during cytokinesis and affects its contractile process. CRIK-deficient mice show severe ataxia and epilepsy as a result of abnor
Probab=96.43 E-value=0.015 Score=64.91 Aligned_cols=16 Identities=31% Similarity=0.713 Sum_probs=14.3
Q ss_pred eEEecCCCCCCeEEcc
Q 002043 814 SWIHSDIMDDNVYMEP 829 (976)
Q Consensus 814 v~iHgDl~~~NILv~~ 829 (976)
-++|+||+|+|||++.
T Consensus 122 ~i~H~Dlkp~NIll~~ 137 (330)
T cd05601 122 GYVHRDIKPENVLIDR 137 (330)
T ss_pred CeEcccCchHheEECC
Confidence 4799999999999975
No 96
>cd05597 STKc_DMPK_like Catalytic domain of Myotonic Dystrophy protein kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Myotonic Dystrophy protein kinase (DMPK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The DMPK-like subfamily is composed of DMPK and DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK). Three isoforms of MRCK are known, named alpha, beta and gamma. The DMPK gene is implicated in myotonic dystrophy 1 (DM1), an inherited multisystemic disorder with symptoms that include muscle hyperexcitability, progressive muscle weakness and wasting, cataract development, testicular atrophy,
Probab=96.43 E-value=0.013 Score=65.82 Aligned_cols=16 Identities=38% Similarity=0.767 Sum_probs=14.2
Q ss_pred eEEecCCCCCCeEEcc
Q 002043 814 SWIHSDIMDDNVYMEP 829 (976)
Q Consensus 814 v~iHgDl~~~NILv~~ 829 (976)
-++|+||+|+|||++.
T Consensus 122 ~ivH~dlkp~Nill~~ 137 (331)
T cd05597 122 GYVHRDIKPDNVLLDK 137 (331)
T ss_pred CeEECCCCHHHEEECC
Confidence 4799999999999965
No 97
>PLN00034 mitogen-activated protein kinase kinase; Provisional
Probab=96.42 E-value=0.015 Score=65.88 Aligned_cols=16 Identities=25% Similarity=0.488 Sum_probs=14.4
Q ss_pred eEEecCCCCCCeEEcc
Q 002043 814 SWIHSDIMDDNVYMEP 829 (976)
Q Consensus 814 v~iHgDl~~~NILv~~ 829 (976)
-++|+||++.|||++.
T Consensus 188 ~ivHrDlkp~NIll~~ 203 (353)
T PLN00034 188 HIVHRDIKPSNLLINS 203 (353)
T ss_pred CEeecCCCHHHEEEcC
Confidence 4799999999999975
No 98
>cd06622 PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS2-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal PBS2-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=96.41 E-value=0.016 Score=62.95 Aligned_cols=17 Identities=29% Similarity=0.421 Sum_probs=14.9
Q ss_pred CeEEecCCCCCCeEEcc
Q 002043 813 CSWIHSDIMDDNVYMEP 829 (976)
Q Consensus 813 pv~iHgDl~~~NILv~~ 829 (976)
.-++|+||+|+||+++.
T Consensus 122 ~~i~H~dl~p~nil~~~ 138 (286)
T cd06622 122 HNIIHRDVKPTNVLVNG 138 (286)
T ss_pred CCEeeCCCCHHHEEECC
Confidence 35799999999999975
No 99
>cd05097 PTKc_DDR_like Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR)-like proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR-like proteins are members of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including
Probab=96.41 E-value=0.02 Score=62.75 Aligned_cols=16 Identities=19% Similarity=0.493 Sum_probs=14.3
Q ss_pred eEEecCCCCCCeEEcc
Q 002043 814 SWIHSDIMDDNVYMEP 829 (976)
Q Consensus 814 v~iHgDl~~~NILv~~ 829 (976)
-++|+||+|.||+++.
T Consensus 149 ~i~H~dlkp~Nill~~ 164 (295)
T cd05097 149 NFVHRDLATRNCLVGN 164 (295)
T ss_pred CeeccccChhhEEEcC
Confidence 4799999999999975
No 100
>cd05588 STKc_aPKC Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. They contain a C2-like region, instead of a calcium-binding (C2) region found in classical PKCs, in their regulatory domain. There are two aPKC isoforms, zeta and iota. aPKCs are involved in many cellular functions incl
Probab=96.38 E-value=0.012 Score=65.98 Aligned_cols=16 Identities=31% Similarity=0.418 Sum_probs=14.3
Q ss_pred eEEecCCCCCCeEEcc
Q 002043 814 SWIHSDIMDDNVYMEP 829 (976)
Q Consensus 814 v~iHgDl~~~NILv~~ 829 (976)
-++|+||+|+|||++.
T Consensus 116 ~ivH~dlkp~Nili~~ 131 (329)
T cd05588 116 GIIYRDLKLDNVLLDA 131 (329)
T ss_pred CeEecCCCHHHeEECC
Confidence 4699999999999975
No 101
>cd07875 STKc_JNK1 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 1. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 1 (JNK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn
Probab=96.38 E-value=0.021 Score=64.97 Aligned_cols=16 Identities=25% Similarity=0.486 Sum_probs=14.3
Q ss_pred eEEecCCCCCCeEEcc
Q 002043 814 SWIHSDIMDDNVYMEP 829 (976)
Q Consensus 814 v~iHgDl~~~NILv~~ 829 (976)
-++|+||+|+|||++.
T Consensus 146 ~ivH~Dlkp~NIll~~ 161 (364)
T cd07875 146 GIIHRDLKPSNIVVKS 161 (364)
T ss_pred CeecCCCCHHHEEECC
Confidence 4699999999999975
No 102
>cd05079 PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1. Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers a
Probab=96.35 E-value=0.024 Score=61.65 Aligned_cols=17 Identities=6% Similarity=-0.103 Sum_probs=14.8
Q ss_pred ccEEEEecccCccchhh
Q 002043 672 WPYIITKRCKGKMFAQL 688 (976)
Q Consensus 672 WpYiVm~rl~G~~l~~v 688 (976)
.+|+||++++|.+|.+.
T Consensus 82 ~~~lv~e~~~g~~L~~~ 98 (284)
T cd05079 82 GIKLIMEFLPSGSLKEY 98 (284)
T ss_pred ceEEEEEccCCCCHHHH
Confidence 58999999999988764
No 103
>cd05573 STKc_ROCK_NDR_like Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the
Probab=96.34 E-value=0.017 Score=64.93 Aligned_cols=17 Identities=35% Similarity=0.706 Sum_probs=14.8
Q ss_pred CeEEecCCCCCCeEEcc
Q 002043 813 CSWIHSDIMDDNVYMEP 829 (976)
Q Consensus 813 pv~iHgDl~~~NILv~~ 829 (976)
.-++|+||+|+|||++.
T Consensus 120 ~giiH~Dlkp~NIll~~ 136 (350)
T cd05573 120 LGFIHRDIKPDNILIDA 136 (350)
T ss_pred CCeeccCCCHHHeEECC
Confidence 34799999999999975
No 104
>cd05579 STKc_MAST_like Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert re
Probab=96.33 E-value=0.015 Score=61.54 Aligned_cols=17 Identities=29% Similarity=0.573 Sum_probs=14.8
Q ss_pred CeEEecCCCCCCeEEcc
Q 002043 813 CSWIHSDIMDDNVYMEP 829 (976)
Q Consensus 813 pv~iHgDl~~~NILv~~ 829 (976)
..++|+||+|.||++++
T Consensus 112 ~~i~H~di~~~nil~~~ 128 (265)
T cd05579 112 NGIIHRDLKPDNILIDS 128 (265)
T ss_pred cCeecCCCCHHHeEEcC
Confidence 34799999999999976
No 105
>cd05593 STKc_PKB_gamma Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulate
Probab=96.31 E-value=0.022 Score=63.91 Aligned_cols=16 Identities=13% Similarity=0.295 Sum_probs=14.2
Q ss_pred eEEecCCCCCCeEEcc
Q 002043 814 SWIHSDIMDDNVYMEP 829 (976)
Q Consensus 814 v~iHgDl~~~NILv~~ 829 (976)
-++|+||+|+|||++.
T Consensus 115 ~ivHrDikp~NIll~~ 130 (328)
T cd05593 115 KIVYRDLKLENLMLDK 130 (328)
T ss_pred CeEecccCHHHeEECC
Confidence 3699999999999975
No 106
>cd05574 STKc_phototropin_like Catalytic domain of Phototropin-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Phototropin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The phototropin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Included in this subfamily are plant phototropins and predominantly uncharacterized fungal STKs whose catalytic domains resemble the phototropin kinase domain. One protein from Neurospora crassa is called nrc-2. Phototropins are blue-light receptors that control responses such as phototropism, stromatal opening, and chloroplast movement in order to optimize the photosynthetic efficiency of plants. They are light-activated STKs that contain an N-termin
Probab=96.30 E-value=0.023 Score=62.85 Aligned_cols=16 Identities=13% Similarity=0.355 Sum_probs=14.3
Q ss_pred eEEecCCCCCCeEEcc
Q 002043 814 SWIHSDIMDDNVYMEP 829 (976)
Q Consensus 814 v~iHgDl~~~NILv~~ 829 (976)
-++|+||+|+||+++.
T Consensus 123 ~i~H~dlkp~Nili~~ 138 (316)
T cd05574 123 GIVYRDLKPENILLHE 138 (316)
T ss_pred CeeccCCChHHeEEcC
Confidence 3799999999999975
No 107
>cd05595 STKc_PKB_beta Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B beta. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, beta (or Akt2) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-beta is the predominant PKB isoform expressed in insulin-responsive tissues. It plays a critical role in the regulation of glucose homeostasis. It is also implicated in muscle cell differentiation. Mice deficient in
Probab=96.27 E-value=0.014 Score=65.32 Aligned_cols=16 Identities=19% Similarity=0.312 Sum_probs=14.3
Q ss_pred eEEecCCCCCCeEEcc
Q 002043 814 SWIHSDIMDDNVYMEP 829 (976)
Q Consensus 814 v~iHgDl~~~NILv~~ 829 (976)
-++|+||+|.|||++.
T Consensus 115 ~ivH~Dlkp~NIll~~ 130 (323)
T cd05595 115 DVVYRDIKLENLMLDK 130 (323)
T ss_pred CeEecCCCHHHEEEcC
Confidence 3799999999999975
No 108
>PTZ00426 cAMP-dependent protein kinase catalytic subunit; Provisional
Probab=96.26 E-value=0.019 Score=65.17 Aligned_cols=16 Identities=13% Similarity=0.384 Sum_probs=14.3
Q ss_pred eEEecCCCCCCeEEcc
Q 002043 814 SWIHSDIMDDNVYMEP 829 (976)
Q Consensus 814 v~iHgDl~~~NILv~~ 829 (976)
-++|+||+|+|||++.
T Consensus 151 ~ivHrDLkp~NILl~~ 166 (340)
T PTZ00426 151 NIVYRDLKPENLLLDK 166 (340)
T ss_pred CeEccCCCHHHEEECC
Confidence 4799999999999965
No 109
>cd05585 STKc_YPK1_like Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It pl
Probab=96.26 E-value=0.025 Score=62.84 Aligned_cols=16 Identities=19% Similarity=0.362 Sum_probs=14.3
Q ss_pred eEEecCCCCCCeEEcc
Q 002043 814 SWIHSDIMDDNVYMEP 829 (976)
Q Consensus 814 v~iHgDl~~~NILv~~ 829 (976)
-++|+||+|+|||++.
T Consensus 113 ~i~HrDlkp~Nili~~ 128 (312)
T cd05585 113 NVIYRDLKPENILLDY 128 (312)
T ss_pred CeEeCCCCHHHeEECC
Confidence 4699999999999975
No 110
>cd05590 STKc_nPKC_eta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signal
Probab=96.25 E-value=0.015 Score=65.13 Aligned_cols=16 Identities=31% Similarity=0.389 Sum_probs=14.3
Q ss_pred eEEecCCCCCCeEEcc
Q 002043 814 SWIHSDIMDDNVYMEP 829 (976)
Q Consensus 814 v~iHgDl~~~NILv~~ 829 (976)
-++|+||+|+|||++.
T Consensus 116 ~ivH~dlkp~NIli~~ 131 (320)
T cd05590 116 GIIYRDLKLDNVLLDH 131 (320)
T ss_pred CeEeCCCCHHHeEECC
Confidence 4799999999999975
No 111
>cd05621 STKc_ROCK2 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 2. Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK2 was the first identified target of activated RhoA, and was found
Probab=96.24 E-value=0.019 Score=65.92 Aligned_cols=16 Identities=31% Similarity=0.630 Sum_probs=14.3
Q ss_pred eEEecCCCCCCeEEcc
Q 002043 814 SWIHSDIMDDNVYMEP 829 (976)
Q Consensus 814 v~iHgDl~~~NILv~~ 829 (976)
-++|+||+|+|||++.
T Consensus 162 ~IvHrDLKp~NILl~~ 177 (370)
T cd05621 162 GLIHRDVKPDNMLLDK 177 (370)
T ss_pred CeEecCCCHHHEEECC
Confidence 4799999999999975
No 112
>cd05102 PTKc_VEGFR3 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 3. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 3 (VEGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR3 (or Flt4) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. V
Probab=96.24 E-value=0.023 Score=63.59 Aligned_cols=17 Identities=24% Similarity=0.438 Sum_probs=15.0
Q ss_pred CeEEecCCCCCCeEEcc
Q 002043 813 CSWIHSDIMDDNVYMEP 829 (976)
Q Consensus 813 pv~iHgDl~~~NILv~~ 829 (976)
.-++|+||+|+|||++.
T Consensus 193 ~~ivHrDiKp~Nil~~~ 209 (338)
T cd05102 193 RKCIHRDLAARNILLSE 209 (338)
T ss_pred CCEECCCCccceEEEcC
Confidence 45899999999999975
No 113
>cd05596 STKc_ROCK Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase. Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK is also referred to as Rho-associated kinase or simply as Rho kinase. It contains an N-terminal extension, a catalytic kinase domain, and a long C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain. It is activated via in
Probab=96.23 E-value=0.02 Score=65.62 Aligned_cols=16 Identities=31% Similarity=0.719 Sum_probs=14.3
Q ss_pred eEEecCCCCCCeEEcc
Q 002043 814 SWIHSDIMDDNVYMEP 829 (976)
Q Consensus 814 v~iHgDl~~~NILv~~ 829 (976)
-++|+||+|.|||++.
T Consensus 162 ~ivHrDLkp~NILl~~ 177 (370)
T cd05596 162 GFIHRDVKPDNMLLDK 177 (370)
T ss_pred CeeccCCCHHHEEEcC
Confidence 4799999999999975
No 114
>cd07876 STKc_JNK2 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 2 (JNK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn
Probab=96.23 E-value=0.022 Score=64.65 Aligned_cols=16 Identities=25% Similarity=0.486 Sum_probs=14.1
Q ss_pred eEEecCCCCCCeEEcc
Q 002043 814 SWIHSDIMDDNVYMEP 829 (976)
Q Consensus 814 v~iHgDl~~~NILv~~ 829 (976)
-++|+||+|+||+++.
T Consensus 143 ~ivHrDlkp~NIl~~~ 158 (359)
T cd07876 143 GIIHRDLKPSNIVVKS 158 (359)
T ss_pred CcccCCCCHHHEEECC
Confidence 3699999999999975
No 115
>PTZ00267 NIMA-related protein kinase; Provisional
Probab=96.22 E-value=0.027 Score=67.01 Aligned_cols=17 Identities=24% Similarity=0.626 Sum_probs=15.0
Q ss_pred CeEEecCCCCCCeEEcc
Q 002043 813 CSWIHSDIMDDNVYMEP 829 (976)
Q Consensus 813 pv~iHgDl~~~NILv~~ 829 (976)
.-++|+||+|.|||+++
T Consensus 188 ~~ivHrDlkp~NIll~~ 204 (478)
T PTZ00267 188 RKMMHRDLKSANIFLMP 204 (478)
T ss_pred CCEEECCcCHHhEEECC
Confidence 45799999999999975
No 116
>cd05587 STKc_cPKC Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C. Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory
Probab=96.22 E-value=0.02 Score=64.04 Aligned_cols=16 Identities=31% Similarity=0.414 Sum_probs=14.4
Q ss_pred eEEecCCCCCCeEEcc
Q 002043 814 SWIHSDIMDDNVYMEP 829 (976)
Q Consensus 814 v~iHgDl~~~NILv~~ 829 (976)
-++|+||+|+|||++.
T Consensus 121 ~ivH~dlkp~Nill~~ 136 (324)
T cd05587 121 GIIYRDLKLDNVMLDA 136 (324)
T ss_pred CeEecCCCHHHeEEcC
Confidence 4799999999999975
No 117
>cd05608 STKc_GRK1 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual g
Probab=96.21 E-value=0.023 Score=61.92 Aligned_cols=16 Identities=25% Similarity=0.407 Sum_probs=14.2
Q ss_pred eEEecCCCCCCeEEcc
Q 002043 814 SWIHSDIMDDNVYMEP 829 (976)
Q Consensus 814 v~iHgDl~~~NILv~~ 829 (976)
-++|+||+|+||+++.
T Consensus 117 ~i~H~dlkp~Nili~~ 132 (280)
T cd05608 117 RIIYRDLKPENVLLDN 132 (280)
T ss_pred CcccCCCCHHHEEECC
Confidence 4699999999999975
No 118
>cd06623 PKc_MAPKK_plant_like Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of
Probab=96.20 E-value=0.025 Score=60.12 Aligned_cols=18 Identities=22% Similarity=0.136 Sum_probs=15.2
Q ss_pred ccEEEEecccCccchhhh
Q 002043 672 WPYIITKRCKGKMFAQLR 689 (976)
Q Consensus 672 WpYiVm~rl~G~~l~~v~ 689 (976)
-+|+||++++|.+|.+..
T Consensus 73 ~~~lv~e~~~~~~L~~~l 90 (264)
T cd06623 73 EISIVLEYMDGGSLADLL 90 (264)
T ss_pred eEEEEEEecCCCcHHHHH
Confidence 579999999999887653
No 119
>PF00069 Pkinase: Protein kinase domain Protein kinase; unclassified specificity. Serine/Threonine protein kinases, catalytic domain Tyrosine kinase, catalytic domain; InterPro: IPR017442 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Eukaryotic protein kinases [, , , , ] are enzymes that belong to a very extensive family of proteins which share a conserved catalytic core common with both serine/threonine and tyrosine protein kinases. There are a number of conserved regions in the catalytic domain of protein kinases. In the N-terminal extremity of the catalytic domain there is a glycine-rich stretch of residues in the vicinity of a lysine residue, which has been shown to be involved in ATP binding. In the central part of the catalytic domain there is a conserved aspartic acid residue which is important for the catalytic activity of the enzyme []. This entry includes protein kinases from eukaryotes and viruses and may include some bacterial hits too.; GO: 0004672 protein kinase activity, 0005524 ATP binding, 0006468 protein phosphorylation; PDB: 3GC7_A 3ZYA_A 3MPT_A 3NEW_A 3MVM_A 1R3C_A 2FST_X 3E93_A 3HV5_B 3OCG_A ....
Probab=96.19 E-value=0.016 Score=61.41 Aligned_cols=41 Identities=32% Similarity=0.536 Sum_probs=24.2
Q ss_pred ccEEEEecccCccchhhh---hcCCHHHHHHHHHHHHHHHHHhh
Q 002043 672 WPYIITKRCKGKMFAQLR---DALSGEDVLNLASFLGEQLRNLH 712 (976)
Q Consensus 672 WpYiVm~rl~G~~l~~v~---~~Ls~ed~~~La~~LG~~L~~LH 712 (976)
..|+||++++|.++.+.. ..++..+...++.++.+.|..||
T Consensus 72 ~~~~v~~~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~L~~Lh 115 (260)
T PF00069_consen 72 YLYIVMEYCPGGSLQDYLQKNKPLSEEEILKIAYQILEALAYLH 115 (260)
T ss_dssp EEEEEEEEETTEBHHHHHHHHSSBBHHHHHHHHHHHHHHHHHHH
T ss_pred cccccccccccccccccccccccccccccccccccccccccccc
Confidence 468999999998877643 23334444444444444444444
No 120
>cd05612 STKc_PRKX_like Catalytic domain of PRKX-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyt
Probab=96.18 E-value=0.019 Score=63.12 Aligned_cols=16 Identities=13% Similarity=0.397 Sum_probs=14.2
Q ss_pred eEEecCCCCCCeEEcc
Q 002043 814 SWIHSDIMDDNVYMEP 829 (976)
Q Consensus 814 v~iHgDl~~~NILv~~ 829 (976)
-++|+||+|+|||++.
T Consensus 121 ~i~H~dlkp~NIli~~ 136 (291)
T cd05612 121 EIVYRDLKPENILLDK 136 (291)
T ss_pred CeeecCCCHHHeEECC
Confidence 4699999999999965
No 121
>cd05602 STKc_SGK1 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 1. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK1 is ubiquitously expressed and is under transcriptional control of numerous stimuli including cell stress (cell shrinkage), serum, hormones (gluco- and mineralocorticoids), gonadotropins, growth factors, interleukin-6, and other cytokines. It plays roles in sodium retention and potassium elimination in the kidney, nutrient transport, salt
Probab=96.18 E-value=0.024 Score=63.38 Aligned_cols=16 Identities=13% Similarity=0.432 Sum_probs=14.3
Q ss_pred eEEecCCCCCCeEEcc
Q 002043 814 SWIHSDIMDDNVYMEP 829 (976)
Q Consensus 814 v~iHgDl~~~NILv~~ 829 (976)
-++|+||+|+|||++.
T Consensus 116 giiHrDlkp~Nili~~ 131 (325)
T cd05602 116 NIVYRDLKPENILLDS 131 (325)
T ss_pred CeEecCCCHHHeEECC
Confidence 4799999999999975
No 122
>cd05614 STKc_MSK2_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 2. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK2, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph
Probab=96.17 E-value=0.029 Score=62.74 Aligned_cols=16 Identities=19% Similarity=0.378 Sum_probs=14.2
Q ss_pred eEEecCCCCCCeEEcc
Q 002043 814 SWIHSDIMDDNVYMEP 829 (976)
Q Consensus 814 v~iHgDl~~~NILv~~ 829 (976)
-++|+||+|+|||++.
T Consensus 125 ~ivHrDlkp~Nili~~ 140 (332)
T cd05614 125 GIVYRDIKLENILLDS 140 (332)
T ss_pred CcEecCCCHHHeEECC
Confidence 3699999999999975
No 123
>cd05615 STKc_cPKC_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C alpha. Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, a
Probab=96.17 E-value=0.021 Score=63.93 Aligned_cols=16 Identities=31% Similarity=0.416 Sum_probs=14.3
Q ss_pred eEEecCCCCCCeEEcc
Q 002043 814 SWIHSDIMDDNVYMEP 829 (976)
Q Consensus 814 v~iHgDl~~~NILv~~ 829 (976)
-++|+||+|+|||++.
T Consensus 121 ~ivHrDikp~Nill~~ 136 (323)
T cd05615 121 GIIYRDLKLDNVMLDS 136 (323)
T ss_pred CeeccCCCHHHeEECC
Confidence 4799999999999975
No 124
>cd05592 STKc_nPKC_theta_delta Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an imp
Probab=96.17 E-value=0.019 Score=64.08 Aligned_cols=17 Identities=29% Similarity=0.321 Sum_probs=14.7
Q ss_pred CeEEecCCCCCCeEEcc
Q 002043 813 CSWIHSDIMDDNVYMEP 829 (976)
Q Consensus 813 pv~iHgDl~~~NILv~~ 829 (976)
.-++|+||+|+|||++.
T Consensus 115 ~~ivH~dlkp~Nill~~ 131 (316)
T cd05592 115 KGIIYRDLKLDNVLLDK 131 (316)
T ss_pred CCEEeCCCCHHHeEECC
Confidence 34799999999999975
No 125
>KOG4720 consensus Ethanolamine kinase [Lipid transport and metabolism]
Probab=96.16 E-value=0.018 Score=63.90 Aligned_cols=36 Identities=11% Similarity=0.337 Sum_probs=29.2
Q ss_pred EEEecccCccchh--hhhcCCHHHHHHHHHHHHHHHHHhhCCCCC
Q 002043 675 IITKRCKGKMFAQ--LRDALSGEDVLNLASFLGEQLRNLHLLPCP 717 (976)
Q Consensus 675 iVm~rl~G~~l~~--v~~~Ls~ed~~~La~~LG~~L~~LHsip~p 717 (976)
+|+++++|+.|+- ++ --+|...+++.+++||++..+
T Consensus 152 Lvyefi~g~tL~p~~mr-------~pki~~lIAr~mak~H~~~~~ 189 (391)
T KOG4720|consen 152 LVYEFIQGKTLEPEHMR-------EPKIFRLIARRMAKIHSIVAT 189 (391)
T ss_pred eEEeeecCcccChhhcc-------ChHHHHHHHHHHHHhheeccC
Confidence 8999999999863 22 246888899999999999776
No 126
>cd06605 PKc_MAPKK Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity
Probab=96.16 E-value=0.033 Score=59.42 Aligned_cols=17 Identities=24% Similarity=0.448 Sum_probs=15.2
Q ss_pred CeEEecCCCCCCeEEcc
Q 002043 813 CSWIHSDIMDDNVYMEP 829 (976)
Q Consensus 813 pv~iHgDl~~~NILv~~ 829 (976)
.-++|+||+|+||+++.
T Consensus 120 ~~i~H~dl~~~ni~~~~ 136 (265)
T cd06605 120 HKIIHRDVKPSNILVNS 136 (265)
T ss_pred CCeecCCCCHHHEEECC
Confidence 56899999999999975
No 127
>cd05096 PTKc_DDR1 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 1. Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 1 (DDR1) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR1 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR1 binds to all collagens tested to date (types I-IV). It is widely expressed in many tissues. It is abundant in the brain and is also found in k
Probab=96.16 E-value=0.025 Score=62.26 Aligned_cols=16 Identities=19% Similarity=0.501 Sum_probs=14.4
Q ss_pred eEEecCCCCCCeEEcc
Q 002043 814 SWIHSDIMDDNVYMEP 829 (976)
Q Consensus 814 v~iHgDl~~~NILv~~ 829 (976)
-++|+||+|+|||++.
T Consensus 158 ~ivH~dlkp~Nill~~ 173 (304)
T cd05096 158 NFVHRDLATRNCLVGE 173 (304)
T ss_pred CccccCcchhheEEcC
Confidence 4799999999999975
No 128
>PTZ00266 NIMA-related protein kinase; Provisional
Probab=96.16 E-value=0.039 Score=70.86 Aligned_cols=42 Identities=14% Similarity=0.221 Sum_probs=28.0
Q ss_pred ccEEEEecccCccchhhhh-------cCCHHHHHHHHHHHHHHHHHhhC
Q 002043 672 WPYIITKRCKGKMFAQLRD-------ALSGEDVLNLASFLGEQLRNLHL 713 (976)
Q Consensus 672 WpYiVm~rl~G~~l~~v~~-------~Ls~ed~~~La~~LG~~L~~LHs 713 (976)
..||||++++|.+|.+... .|++.....++.||..-|.-||+
T Consensus 88 ~lyIVMEY~~gGSL~~lL~k~~~~~g~L~E~~Il~Ia~QIL~ALaYLHs 136 (1021)
T PTZ00266 88 KLYILMEFCDAGDLSRNIQKCYKMFGKIEEHAIVDITRQLLHALAYCHN 136 (1021)
T ss_pred EEEEEEeCCCCCcHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHh
Confidence 5799999999998876432 34555555555565555555554
No 129
>cd05618 STKc_aPKC_iota Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C iota. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, iota isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-iota is directly implicated in carcinogenesis. It is critical to oncogenic signaling mediated by Ras and Bcr-Abl. The PKC-iota gene is the target o
Probab=96.15 E-value=0.022 Score=64.09 Aligned_cols=16 Identities=31% Similarity=0.420 Sum_probs=14.4
Q ss_pred eEEecCCCCCCeEEcc
Q 002043 814 SWIHSDIMDDNVYMEP 829 (976)
Q Consensus 814 v~iHgDl~~~NILv~~ 829 (976)
-++|+||+|+||+++.
T Consensus 116 ~ivH~Dikp~Nili~~ 131 (329)
T cd05618 116 GIIYRDLKLDNVLLDS 131 (329)
T ss_pred CeeeCCCCHHHEEECC
Confidence 4799999999999975
No 130
>cd05604 STKc_SGK3 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 3. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGK3 is expressed in most tissues and is most abundant in the embryo and adult heart and spleen. It was originally discovered in a screen for antiapoptotic genes. It phosphorylates and inhibits the proapoptotic proteins, Bad and FKHRL1. SGK3 also regulates many transporters, ion channels,
Probab=96.14 E-value=0.028 Score=62.87 Aligned_cols=16 Identities=13% Similarity=0.432 Sum_probs=14.3
Q ss_pred eEEecCCCCCCeEEcc
Q 002043 814 SWIHSDIMDDNVYMEP 829 (976)
Q Consensus 814 v~iHgDl~~~NILv~~ 829 (976)
-++|+||+|+|||++.
T Consensus 116 givH~Dlkp~NIll~~ 131 (325)
T cd05604 116 NIVYRDLKPENILLDS 131 (325)
T ss_pred CeeecCCCHHHeEECC
Confidence 4799999999999975
No 131
>cd05122 PKc_STE Catalytic domain of STE family Protein Kinases. Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core
Probab=96.12 E-value=0.04 Score=57.52 Aligned_cols=17 Identities=29% Similarity=0.458 Sum_probs=14.7
Q ss_pred CeEEecCCCCCCeEEcc
Q 002043 813 CSWIHSDIMDDNVYMEP 829 (976)
Q Consensus 813 pv~iHgDl~~~NILv~~ 829 (976)
.-++||||+|.||++++
T Consensus 117 ~~i~h~dl~p~ni~i~~ 133 (253)
T cd05122 117 NGIIHRDIKAANILLTS 133 (253)
T ss_pred CCEecCCCCHHHEEEcc
Confidence 34799999999999975
No 132
>cd05038 PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases. Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by aut
Probab=96.12 E-value=0.038 Score=59.48 Aligned_cols=16 Identities=31% Similarity=0.675 Sum_probs=14.4
Q ss_pred eEEecCCCCCCeEEcc
Q 002043 814 SWIHSDIMDDNVYMEP 829 (976)
Q Consensus 814 v~iHgDl~~~NILv~~ 829 (976)
-++|+||+|+||+++.
T Consensus 129 ~i~H~dl~p~nil~~~ 144 (284)
T cd05038 129 RYIHRDLAARNILVES 144 (284)
T ss_pred CeecCCCCHHhEEEcC
Confidence 4799999999999975
No 133
>cd05609 STKc_MAST Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine kinase. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. There are four mammalian MAST kinases, named MAST1-MAST4. MAST1 is also referred to as syntrophin-associated STK (SAST), while MAST2 is also called MAST205. MAST kinases are cytoskeletal associated kinases of unknown function that a
Probab=96.12 E-value=0.029 Score=61.84 Aligned_cols=16 Identities=25% Similarity=0.542 Sum_probs=14.3
Q ss_pred eEEecCCCCCCeEEcc
Q 002043 814 SWIHSDIMDDNVYMEP 829 (976)
Q Consensus 814 v~iHgDl~~~NILv~~ 829 (976)
-++|+||+|+||+++.
T Consensus 121 ~i~H~dl~p~NIll~~ 136 (305)
T cd05609 121 GIVHRDLKPDNLLITS 136 (305)
T ss_pred CccccCCchHHEEECC
Confidence 4799999999999975
No 134
>cd05603 STKc_SGK2 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 2. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK2 shows a more restricted distribution that SGK1 and is most abundantly expressed in epithelial tissues including kidney, liver, pancreas, and the choroid plexus of the brain. In vitro cellular assays show that SGK2 can stimulate the activity of ion channels, the glutamate transporter EEAT4, and the glutamate receptors, GluR6 and GLUR1.
Probab=96.11 E-value=0.029 Score=62.58 Aligned_cols=16 Identities=19% Similarity=0.451 Sum_probs=14.3
Q ss_pred eEEecCCCCCCeEEcc
Q 002043 814 SWIHSDIMDDNVYMEP 829 (976)
Q Consensus 814 v~iHgDl~~~NILv~~ 829 (976)
-++|+||+|+||+++.
T Consensus 116 ~ivH~Dlkp~NIll~~ 131 (321)
T cd05603 116 NIIYRDLKPENILLDS 131 (321)
T ss_pred CeEeccCCHHHeEECC
Confidence 4799999999999975
No 135
>smart00558 JmjC A domain family that is part of the cupin metalloenzyme superfamily. Probable enzymes, but of unknown functions, that regulate chromatin reorganisation processes (Clissold and Ponting, in press).
Probab=96.11 E-value=0.005 Score=51.81 Aligned_cols=49 Identities=27% Similarity=0.428 Sum_probs=34.9
Q ss_pred CCCCccccchhcccCCCC-CCCcceEEeecCCCCCcccccCCCCcccEEEEEEE
Q 002043 230 RVPDLFQEDLFNVLDGDM-RPSYRWVIIGPQRSGASWHVDPALTSAWNTLLCGR 282 (976)
Q Consensus 230 ~vP~~f~eDlf~~l~~~~-rp~~rwL~iGp~gSgT~lH~Dp~~t~awn~qI~Gr 282 (976)
.+|. ..++++.++... .+..+|+++|+.+|.|++|+|++++ +|..+.|.
T Consensus 7 ~lP~--~~~ll~~~~~~~~~~~~~~~~~G~~~s~t~~H~d~~~~--~n~~~~~~ 56 (57)
T smart00558 7 KLPF--KLNLLSDLPEDILGPDVPYLYMGMAGSVTPWHIDDYDL--VNYLHQGA 56 (57)
T ss_pred hCCC--cchHHHHCCcccCCCCcceEEEeCCCCccceeEcCCCe--EEEEEecC
Confidence 3454 456666665333 3445899999999999999999986 66666553
No 136
>KOG0595 consensus Serine/threonine-protein kinase involved in autophagy [Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]
Probab=96.10 E-value=0.048 Score=62.69 Aligned_cols=46 Identities=20% Similarity=0.185 Sum_probs=31.9
Q ss_pred CeEEecCCCCCCeEEccCCcccCCCCCCCCCCCccCCCCCCCCccCcCccceeeEEEeCCCCCCCCcccchhh
Q 002043 813 CSWIHSDIMDDNVYMEPCCASSRSNGNAADTGPMVNGSINGYDEFGEAKSWHCSHIIDFSNLSIGDPIYDVIP 885 (976)
Q Consensus 813 pv~iHgDl~~~NILv~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~~~~~~w~~sGIIDFgd~~iGDP~~Dlv~ 885 (976)
--+||.||+|+|||+.... +.+ .--..-|=|||-+..=+|-+-+..
T Consensus 128 ~~IiHRDLKPQNiLLs~~~---------------------~~~------~~~~LKIADFGfAR~L~~~~~a~t 173 (429)
T KOG0595|consen 128 NNIIHRDLKPQNILLSTTA---------------------RND------TSPVLKIADFGFARFLQPGSMAET 173 (429)
T ss_pred CCeeeccCCcceEEeccCC---------------------CCC------CCceEEecccchhhhCCchhHHHH
Confidence 4679999999999997531 000 002457889999998777666543
No 137
>cd05591 STKc_nPKC_epsilon Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C epsilon. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), epsilon isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to
Probab=96.10 E-value=0.023 Score=63.37 Aligned_cols=16 Identities=25% Similarity=0.395 Sum_probs=14.4
Q ss_pred eEEecCCCCCCeEEcc
Q 002043 814 SWIHSDIMDDNVYMEP 829 (976)
Q Consensus 814 v~iHgDl~~~NILv~~ 829 (976)
-++|+||+|+|||++.
T Consensus 116 ~ivHrDikp~Nill~~ 131 (321)
T cd05591 116 GVIYRDLKLDNILLDA 131 (321)
T ss_pred CeeccCCCHHHeEECC
Confidence 4799999999999975
No 138
>cd05071 PTKc_Src Catalytic domain of the Protein Tyrosine Kinase, Src. Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is invo
Probab=96.08 E-value=0.046 Score=58.84 Aligned_cols=17 Identities=18% Similarity=0.499 Sum_probs=14.6
Q ss_pred CeEEecCCCCCCeEEcc
Q 002043 813 CSWIHSDIMDDNVYMEP 829 (976)
Q Consensus 813 pv~iHgDl~~~NILv~~ 829 (976)
.-++|+||+|+||++++
T Consensus 121 ~~i~H~dl~p~Nill~~ 137 (262)
T cd05071 121 MNYVHRDLRAANILVGE 137 (262)
T ss_pred CCccccccCcccEEEcC
Confidence 34699999999999975
No 139
>PRK09188 serine/threonine protein kinase; Provisional
Probab=96.08 E-value=0.03 Score=64.69 Aligned_cols=17 Identities=29% Similarity=0.472 Sum_probs=14.3
Q ss_pred CeEEecCC-CCCCeEEcc
Q 002043 813 CSWIHSDI-MDDNVYMEP 829 (976)
Q Consensus 813 pv~iHgDl-~~~NILv~~ 829 (976)
.-++|+|| +|+|||++.
T Consensus 130 ~gIiHrDL~KP~NILv~~ 147 (365)
T PRK09188 130 AGITHNDLAKPQNWLMGP 147 (365)
T ss_pred CCCeeCCCCCcceEEEcC
Confidence 35599999 899999964
No 140
>cd05083 PTKc_Chk Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase. Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src ki
Probab=96.07 E-value=0.048 Score=58.13 Aligned_cols=17 Identities=18% Similarity=0.391 Sum_probs=14.7
Q ss_pred CeEEecCCCCCCeEEcc
Q 002043 813 CSWIHSDIMDDNVYMEP 829 (976)
Q Consensus 813 pv~iHgDl~~~NILv~~ 829 (976)
.-++|+|++|+||+++.
T Consensus 119 ~~~~H~dl~p~nili~~ 135 (254)
T cd05083 119 KKLVHRDLAARNILVSE 135 (254)
T ss_pred CCeeccccCcceEEEcC
Confidence 35699999999999965
No 141
>cd07874 STKc_JNK3 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 3. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 3 (JNK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK3 is expressed primarily in the brain, and to a lesser extent in the heart and testis. Mice deficient in Jnk3 are protected against kainic acid-induced seizures, strok
Probab=96.07 E-value=0.025 Score=63.91 Aligned_cols=16 Identities=25% Similarity=0.486 Sum_probs=14.1
Q ss_pred eEEecCCCCCCeEEcc
Q 002043 814 SWIHSDIMDDNVYMEP 829 (976)
Q Consensus 814 v~iHgDl~~~NILv~~ 829 (976)
-++|+||+|+|||++.
T Consensus 139 givHrDikp~Nill~~ 154 (355)
T cd07874 139 GIIHRDLKPSNIVVKS 154 (355)
T ss_pred CcccCCCChHHEEECC
Confidence 3699999999999975
No 142
>cd05584 STKc_p70S6K Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase. Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the in
Probab=96.06 E-value=0.027 Score=62.98 Aligned_cols=16 Identities=19% Similarity=0.439 Sum_probs=14.3
Q ss_pred eEEecCCCCCCeEEcc
Q 002043 814 SWIHSDIMDDNVYMEP 829 (976)
Q Consensus 814 v~iHgDl~~~NILv~~ 829 (976)
-++|+||+|+|||++.
T Consensus 120 ~ivH~dlkp~Nil~~~ 135 (323)
T cd05584 120 GIIYRDLKPENILLDA 135 (323)
T ss_pred CeecCCCCHHHeEECC
Confidence 4799999999999975
No 143
>PTZ00263 protein kinase A catalytic subunit; Provisional
Probab=96.06 E-value=0.026 Score=63.38 Aligned_cols=16 Identities=19% Similarity=0.389 Sum_probs=14.3
Q ss_pred eEEecCCCCCCeEEcc
Q 002043 814 SWIHSDIMDDNVYMEP 829 (976)
Q Consensus 814 v~iHgDl~~~NILv~~ 829 (976)
-++|+||+|.|||++.
T Consensus 138 ~ivH~dlkp~NIll~~ 153 (329)
T PTZ00263 138 DIIYRDLKPENLLLDN 153 (329)
T ss_pred CeeecCCCHHHEEECC
Confidence 4799999999999975
No 144
>cd05622 STKc_ROCK1 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 1. Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK1 (or ROK-beta) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK1 is preferentially expressed in the liver, lung, spleen, testes, an
Probab=96.06 E-value=0.031 Score=64.18 Aligned_cols=16 Identities=31% Similarity=0.719 Sum_probs=14.4
Q ss_pred eEEecCCCCCCeEEcc
Q 002043 814 SWIHSDIMDDNVYMEP 829 (976)
Q Consensus 814 v~iHgDl~~~NILv~~ 829 (976)
-++|+||+|+|||++.
T Consensus 162 ~ivHrDLkp~NIll~~ 177 (371)
T cd05622 162 GFIHRDVKPDNMLLDK 177 (371)
T ss_pred CEEeCCCCHHHEEECC
Confidence 4799999999999975
No 145
>cd05589 STKc_PKN Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase N. Serine/Threonine Kinases (STKs), Protein Kinase N (PKN) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved
Probab=96.05 E-value=0.027 Score=63.00 Aligned_cols=16 Identities=19% Similarity=0.355 Sum_probs=14.3
Q ss_pred eEEecCCCCCCeEEcc
Q 002043 814 SWIHSDIMDDNVYMEP 829 (976)
Q Consensus 814 v~iHgDl~~~NILv~~ 829 (976)
-++|+||+|+||++++
T Consensus 121 ~ivHrdlkp~Nill~~ 136 (324)
T cd05589 121 KIVYRDLKLDNLLLDT 136 (324)
T ss_pred CeEecCCCHHHeEECC
Confidence 4699999999999975
No 146
>cd05088 PTKc_Tie2 Catalytic domain of the Protein Tyrosine Kinase, Tie2. Protein Tyrosine Kinase (PTK) family; Tie2; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie2 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie2 is expressed mainly in endothelial cells and hematopoietic stem cells. It is also found in a subset of tumor-associated monocytes and eosinophils. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2. The binding of A
Probab=96.04 E-value=0.036 Score=61.20 Aligned_cols=17 Identities=24% Similarity=0.475 Sum_probs=14.8
Q ss_pred CeEEecCCCCCCeEEcc
Q 002043 813 CSWIHSDIMDDNVYMEP 829 (976)
Q Consensus 813 pv~iHgDl~~~NILv~~ 829 (976)
.-++|+||+|+|||++.
T Consensus 143 ~gi~H~dlkp~Nili~~ 159 (303)
T cd05088 143 KQFIHRDLAARNILVGE 159 (303)
T ss_pred CCccccccchheEEecC
Confidence 35699999999999975
No 147
>cd06650 PKc_MEK1 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1. Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downst
Probab=96.03 E-value=0.046 Score=61.52 Aligned_cols=16 Identities=19% Similarity=0.472 Sum_probs=14.3
Q ss_pred eEEecCCCCCCeEEcc
Q 002043 814 SWIHSDIMDDNVYMEP 829 (976)
Q Consensus 814 v~iHgDl~~~NILv~~ 829 (976)
-++|+||+|+|||++.
T Consensus 124 ~ivH~dlkp~Nili~~ 139 (333)
T cd06650 124 KIMHRDVKPSNILVNS 139 (333)
T ss_pred CEEecCCChhhEEEcC
Confidence 4799999999999975
No 148
>cd05617 STKc_aPKC_zeta Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C zeta. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, zeta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-zeta plays a critical role in activating the glucose transport response. It is activated by glucose, insulin, and exercise through diverse pathways
Probab=96.02 E-value=0.022 Score=63.91 Aligned_cols=16 Identities=31% Similarity=0.418 Sum_probs=14.3
Q ss_pred eEEecCCCCCCeEEcc
Q 002043 814 SWIHSDIMDDNVYMEP 829 (976)
Q Consensus 814 v~iHgDl~~~NILv~~ 829 (976)
-++|+||+|+|||++.
T Consensus 116 ~ivHrDlkp~Nili~~ 131 (327)
T cd05617 116 GIIYRDLKLDNVLLDA 131 (327)
T ss_pred CeeccCCCHHHEEEeC
Confidence 4799999999999975
No 149
>cd08219 STKc_Nek3 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 3. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 3 (Nek3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek3 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek3 is primarily localized in the cytoplasm and shows no cell cycle-dependent changes in its activity. It is present in the axons of neurons and affects morphogenesis and polarity through its regulation of microtubule acetylation. Nek3 modulates the signaling of the prolactin receptor through its activati
Probab=96.00 E-value=0.049 Score=57.97 Aligned_cols=16 Identities=25% Similarity=0.596 Sum_probs=14.2
Q ss_pred eEEecCCCCCCeEEcc
Q 002043 814 SWIHSDIMDDNVYMEP 829 (976)
Q Consensus 814 v~iHgDl~~~NILv~~ 829 (976)
-++|+||+|.||++++
T Consensus 120 ~i~H~dl~p~nili~~ 135 (255)
T cd08219 120 RVLHRDIKSKNIFLTQ 135 (255)
T ss_pred CcccCCCCcceEEECC
Confidence 4699999999999975
No 150
>cd05098 PTKc_FGFR1 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 1 (FGFR1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR1 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=95.97 E-value=0.029 Score=61.94 Aligned_cols=17 Identities=29% Similarity=0.403 Sum_probs=14.8
Q ss_pred CeEEecCCCCCCeEEcc
Q 002043 813 CSWIHSDIMDDNVYMEP 829 (976)
Q Consensus 813 pv~iHgDl~~~NILv~~ 829 (976)
.-++|+||+|+||++++
T Consensus 159 ~gi~H~dlkp~Nill~~ 175 (307)
T cd05098 159 KKCIHRDLAARNVLVTE 175 (307)
T ss_pred CCcccccccHHheEEcC
Confidence 35799999999999975
No 151
>COG2187 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=95.95 E-value=0.031 Score=61.73 Aligned_cols=68 Identities=24% Similarity=0.345 Sum_probs=52.7
Q ss_pred CCCeEEecCCCCCCeEEccCCcccCCCCCCCCCCCccCCCCCCCCccCcCccceeeEEEeCCC-CCCCCcccchhhhccc
Q 002043 811 KPCSWIHSDIMDDNVYMEPCCASSRSNGNAADTGPMVNGSINGYDEFGEAKSWHCSHIIDFSN-LSIGDPIYDVIPIHLD 889 (976)
Q Consensus 811 ~~pv~iHgDl~~~NILv~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~~~~~~w~~sGIIDFgd-~~iGDP~~Dlv~l~l~ 889 (976)
....=.|||||-+||..-.. .-.+--=|-|.+ ..++|-.||++-+.++
T Consensus 207 g~IRecHGDLhl~ni~l~dg-------------------------------~~~LFDCIEFNd~fr~iDv~~D~AFl~MD 255 (337)
T COG2187 207 GFIRECHGDLHLRNICLWDG-------------------------------EPALFDCIEFNDPFRFIDVLYDLAFLAMD 255 (337)
T ss_pred CCceecccchhhcceeeecC-------------------------------cceEEEEeecCCcchHHHHHHHHHHHHhh
Confidence 34555799999999998642 224555566765 5678999999999888
Q ss_pred c-cCCChHHHHHHHHhcCCcc
Q 002043 890 I-FRGDSSLFKQFLESYKLPL 909 (976)
Q Consensus 890 ~-f~gd~~l~~~fl~~Y~~~~ 909 (976)
+ ++|-+++.+.||..|.-.-
T Consensus 256 Le~~gr~dla~~~ln~Yl~~t 276 (337)
T COG2187 256 LEFRGRKDLARRFLNTYLEET 276 (337)
T ss_pred HhhcCChHHHHHHHHHHHHHh
Confidence 6 8888899999999997544
No 152
>cd07848 STKc_CDKL5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase Like 5. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 5 (CDKL5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Mutations in the gene encoding CDKL5, previously called STK9, are associated with early onset epilepsy and severe mental retardation [X-linked infantile spasm syndrome (ISSX) or West syndrome]. In addition, CDKL5 mutations also sometimes
Probab=95.95 E-value=0.051 Score=59.03 Aligned_cols=16 Identities=25% Similarity=0.503 Sum_probs=14.3
Q ss_pred eEEecCCCCCCeEEcc
Q 002043 814 SWIHSDIMDDNVYMEP 829 (976)
Q Consensus 814 v~iHgDl~~~NILv~~ 829 (976)
-++|+||+|+||+++.
T Consensus 120 ~i~H~dlkp~Nill~~ 135 (287)
T cd07848 120 DIVHRDIKPENLLISH 135 (287)
T ss_pred CeecCCCCHHHEEEcC
Confidence 4799999999999965
No 153
>cd07850 STKc_JNK Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase (JNK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. They are also essential regulators of physiological and pathological processes and are involved in the pathogenesis of several diseases such as diabetes, atherosclerosis, stroke, Parkinson's and Alzheimer's. Vetebrates harbor three different JNK
Probab=95.95 E-value=0.037 Score=62.61 Aligned_cols=16 Identities=25% Similarity=0.486 Sum_probs=14.2
Q ss_pred eEEecCCCCCCeEEcc
Q 002043 814 SWIHSDIMDDNVYMEP 829 (976)
Q Consensus 814 v~iHgDl~~~NILv~~ 829 (976)
-++|+||+|+||+++.
T Consensus 138 gi~H~dlkp~Nil~~~ 153 (353)
T cd07850 138 GIIHRDLKPSNIVVKS 153 (353)
T ss_pred CeeeCCCCHHHEEECC
Confidence 4699999999999975
No 154
>cd05575 STKc_SGK Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell pr
Probab=95.93 E-value=0.041 Score=61.49 Aligned_cols=16 Identities=19% Similarity=0.451 Sum_probs=14.3
Q ss_pred eEEecCCCCCCeEEcc
Q 002043 814 SWIHSDIMDDNVYMEP 829 (976)
Q Consensus 814 v~iHgDl~~~NILv~~ 829 (976)
-++|+||+|+|||++.
T Consensus 116 givH~dikp~NIll~~ 131 (323)
T cd05575 116 NIIYRDLKPENILLDS 131 (323)
T ss_pred CeEeCCCCHHHeEECC
Confidence 4799999999999975
No 155
>cd07871 STKc_PCTAIRE3 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filament
Probab=95.93 E-value=0.036 Score=60.69 Aligned_cols=16 Identities=19% Similarity=0.453 Sum_probs=14.3
Q ss_pred eEEecCCCCCCeEEcc
Q 002043 814 SWIHSDIMDDNVYMEP 829 (976)
Q Consensus 814 v~iHgDl~~~NILv~~ 829 (976)
-++|+||+|+|||++.
T Consensus 123 ~ivH~dlkp~Nil~~~ 138 (288)
T cd07871 123 KILHRDLKPQNLLINE 138 (288)
T ss_pred CcccCCCCHHHEEECC
Confidence 4699999999999975
No 156
>cd05610 STKc_MASTL Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ1481
Probab=95.93 E-value=0.037 Score=68.84 Aligned_cols=16 Identities=31% Similarity=0.536 Sum_probs=14.4
Q ss_pred eEEecCCCCCCeEEcc
Q 002043 814 SWIHSDIMDDNVYMEP 829 (976)
Q Consensus 814 v~iHgDl~~~NILv~~ 829 (976)
-++|+||+|+|||++.
T Consensus 124 gIiHrDLKP~NILl~~ 139 (669)
T cd05610 124 GIIHRDLKPDNMLISN 139 (669)
T ss_pred CEEeCCccHHHEEEcC
Confidence 5799999999999965
No 157
>cd07872 STKc_PCTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play
Probab=95.92 E-value=0.044 Score=60.57 Aligned_cols=17 Identities=18% Similarity=0.368 Sum_probs=14.8
Q ss_pred CeEEecCCCCCCeEEcc
Q 002043 813 CSWIHSDIMDDNVYMEP 829 (976)
Q Consensus 813 pv~iHgDl~~~NILv~~ 829 (976)
.-++|+||+|+||+++.
T Consensus 123 ~~ivH~dlkp~Nill~~ 139 (309)
T cd07872 123 RKVLHRDLKPQNLLINE 139 (309)
T ss_pred CCeecCCCCHHHEEECC
Confidence 34799999999999975
No 158
>cd05068 PTKc_Frk_like Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins a
Probab=95.91 E-value=0.057 Score=57.79 Aligned_cols=17 Identities=29% Similarity=0.513 Sum_probs=14.9
Q ss_pred CeEEecCCCCCCeEEcc
Q 002043 813 CSWIHSDIMDDNVYMEP 829 (976)
Q Consensus 813 pv~iHgDl~~~NILv~~ 829 (976)
.-++|+||+|+||+++.
T Consensus 122 ~~i~H~dl~p~Nil~~~ 138 (261)
T cd05068 122 QNYIHRDLAARNVLVGE 138 (261)
T ss_pred CCeeeccCCcceEEEcC
Confidence 35799999999999975
No 159
>cd05036 PTKc_ALK_LTK Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase. Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well
Probab=95.90 E-value=0.063 Score=58.14 Aligned_cols=16 Identities=31% Similarity=0.501 Sum_probs=14.5
Q ss_pred eEEecCCCCCCeEEcc
Q 002043 814 SWIHSDIMDDNVYMEP 829 (976)
Q Consensus 814 v~iHgDl~~~NILv~~ 829 (976)
-++|+||+|+||+++.
T Consensus 136 ~ivH~dlkp~nil~~~ 151 (277)
T cd05036 136 HFIHRDIAARNCLLTC 151 (277)
T ss_pred CEeecccchheEEEec
Confidence 4899999999999975
No 160
>smart00219 TyrKc Tyrosine kinase, catalytic domain. Phosphotransferases. Tyrosine-specific kinase subfamily.
Probab=95.89 E-value=0.069 Score=56.40 Aligned_cols=18 Identities=11% Similarity=0.015 Sum_probs=15.0
Q ss_pred ccEEEEecccCccchhhh
Q 002043 672 WPYIITKRCKGKMFAQLR 689 (976)
Q Consensus 672 WpYiVm~rl~G~~l~~v~ 689 (976)
..|+||++++|.++.+..
T Consensus 75 ~~~~i~e~~~~~~l~~~~ 92 (258)
T smart00219 75 PLMIVMEYMEGGDLLDYL 92 (258)
T ss_pred eeEEEEeccCCCCHHHHH
Confidence 589999999998887643
No 161
>cd07869 STKc_PFTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase. Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 an
Probab=95.88 E-value=0.04 Score=60.75 Aligned_cols=16 Identities=19% Similarity=0.393 Sum_probs=14.3
Q ss_pred eEEecCCCCCCeEEcc
Q 002043 814 SWIHSDIMDDNVYMEP 829 (976)
Q Consensus 814 v~iHgDl~~~NILv~~ 829 (976)
-++|+||+|+|||++.
T Consensus 123 ~ivH~dlkp~Nill~~ 138 (303)
T cd07869 123 YILHRDLKPQNLLISD 138 (303)
T ss_pred CeecCCCCHHHEEECC
Confidence 4799999999999975
No 162
>cd05080 PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of sign
Probab=95.88 E-value=0.067 Score=58.05 Aligned_cols=16 Identities=31% Similarity=0.661 Sum_probs=14.3
Q ss_pred eEEecCCCCCCeEEcc
Q 002043 814 SWIHSDIMDDNVYMEP 829 (976)
Q Consensus 814 v~iHgDl~~~NILv~~ 829 (976)
-++|+||+|+||++++
T Consensus 127 ~i~H~dlkp~Nili~~ 142 (283)
T cd05080 127 HYIHRDLAARNVLLDN 142 (283)
T ss_pred CeeccccChheEEEcC
Confidence 4799999999999975
No 163
>cd06640 STKc_MST4 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by inter
Probab=95.88 E-value=0.052 Score=58.82 Aligned_cols=16 Identities=38% Similarity=0.476 Sum_probs=14.0
Q ss_pred eEEecCCCCCCeEEcc
Q 002043 814 SWIHSDIMDDNVYMEP 829 (976)
Q Consensus 814 v~iHgDl~~~NILv~~ 829 (976)
-++|+||+|+||+++.
T Consensus 121 ~ivH~dl~p~Nil~~~ 136 (277)
T cd06640 121 KKIHRDIKAANVLLSE 136 (277)
T ss_pred CccCcCCChhhEEEcC
Confidence 4689999999999975
No 164
>cd05059 PTKc_Tec_like Catalytic domain of Tec-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows
Probab=95.87 E-value=0.05 Score=58.15 Aligned_cols=15 Identities=27% Similarity=0.527 Sum_probs=13.6
Q ss_pred EEecCCCCCCeEEcc
Q 002043 815 WIHSDIMDDNVYMEP 829 (976)
Q Consensus 815 ~iHgDl~~~NILv~~ 829 (976)
++|+||+|+||+++.
T Consensus 121 i~H~dl~p~ni~i~~ 135 (256)
T cd05059 121 FIHRDLAARNCLVGE 135 (256)
T ss_pred cccccccHhhEEECC
Confidence 689999999999975
No 165
>cd08529 STKc_FA2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains. Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cyc
Probab=95.85 E-value=0.055 Score=57.33 Aligned_cols=17 Identities=24% Similarity=0.479 Sum_probs=14.9
Q ss_pred CeEEecCCCCCCeEEcc
Q 002043 813 CSWIHSDIMDDNVYMEP 829 (976)
Q Consensus 813 pv~iHgDl~~~NILv~~ 829 (976)
.-++|+||+|+||++++
T Consensus 120 ~~i~h~dl~~~nili~~ 136 (256)
T cd08529 120 KKILHRDIKSLNLFLDA 136 (256)
T ss_pred CCcccCCCCcceEEEeC
Confidence 45799999999999975
No 166
>cd05624 STKc_MRCK_beta Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase beta. Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) beta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKbeta is expressed ubiquitously in many tissues.
Probab=95.84 E-value=0.034 Score=62.44 Aligned_cols=17 Identities=35% Similarity=0.645 Sum_probs=14.6
Q ss_pred CeEEecCCCCCCeEEcc
Q 002043 813 CSWIHSDIMDDNVYMEP 829 (976)
Q Consensus 813 pv~iHgDl~~~NILv~~ 829 (976)
.-++|+||+|+|||++.
T Consensus 121 ~~iiHrDlkp~Nill~~ 137 (331)
T cd05624 121 LHYVHRDIKPDNVLLDM 137 (331)
T ss_pred CCeeeccCchHHEEEcC
Confidence 34699999999999975
No 167
>cd05085 PTKc_Fer Catalytic domain of the Protein Tyrosine Kinase, Fer. Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-c
Probab=95.82 E-value=0.065 Score=56.73 Aligned_cols=17 Identities=24% Similarity=0.339 Sum_probs=14.8
Q ss_pred CeEEecCCCCCCeEEcc
Q 002043 813 CSWIHSDIMDDNVYMEP 829 (976)
Q Consensus 813 pv~iHgDl~~~NILv~~ 829 (976)
.-++|+||+|+||+++.
T Consensus 112 ~~~~H~dl~p~nili~~ 128 (250)
T cd05085 112 KNCIHRDLAARNCLVGE 128 (250)
T ss_pred CCeeecccChheEEEcC
Confidence 35799999999999975
No 168
>cd05105 PTKc_PDGFR_alpha Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor alpha. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) alpha; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR alpha is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR alpha forms homodimers or heterodimers with PDGFR beta, depending on the nature of the PDGF ligand. PDGF-AA, PDGF-
Probab=95.81 E-value=0.045 Score=63.80 Aligned_cols=17 Identities=24% Similarity=0.432 Sum_probs=15.0
Q ss_pred CeEEecCCCCCCeEEcc
Q 002043 813 CSWIHSDIMDDNVYMEP 829 (976)
Q Consensus 813 pv~iHgDl~~~NILv~~ 829 (976)
.-++|+||+|.|||++.
T Consensus 256 ~~ivH~dikp~Nill~~ 272 (400)
T cd05105 256 KNCVHRDLAARNVLLAQ 272 (400)
T ss_pred CCeeCCCCChHhEEEeC
Confidence 45799999999999975
No 169
>cd07862 STKc_CDK6 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytopla
Probab=95.81 E-value=0.06 Score=58.56 Aligned_cols=16 Identities=19% Similarity=0.443 Sum_probs=14.3
Q ss_pred eEEecCCCCCCeEEcc
Q 002043 814 SWIHSDIMDDNVYMEP 829 (976)
Q Consensus 814 v~iHgDl~~~NILv~~ 829 (976)
-++|+||+|+|||++.
T Consensus 130 ~iiH~dlkp~Nil~~~ 145 (290)
T cd07862 130 RVVHRDLKPQNILVTS 145 (290)
T ss_pred CeeeCCCCHHHEEEcC
Confidence 4799999999999975
No 170
>cd05094 PTKc_TrkC Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some n
Probab=95.81 E-value=0.058 Score=58.97 Aligned_cols=17 Identities=18% Similarity=0.419 Sum_probs=15.0
Q ss_pred CeEEecCCCCCCeEEcc
Q 002043 813 CSWIHSDIMDDNVYMEP 829 (976)
Q Consensus 813 pv~iHgDl~~~NILv~~ 829 (976)
.-++|+||+|.||+++.
T Consensus 142 ~~i~H~dlkp~Nil~~~ 158 (291)
T cd05094 142 QHFVHRDLATRNCLVGA 158 (291)
T ss_pred CCeeecccCcceEEEcc
Confidence 45799999999999975
No 171
>cd05611 STKc_Rim15_like Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a do
Probab=95.81 E-value=0.06 Score=57.45 Aligned_cols=17 Identities=24% Similarity=0.430 Sum_probs=14.9
Q ss_pred ccEEEEecccCccchhh
Q 002043 672 WPYIITKRCKGKMFAQL 688 (976)
Q Consensus 672 WpYiVm~rl~G~~l~~v 688 (976)
.+|+||++++|.+|.+.
T Consensus 71 ~~~lv~e~~~~~~L~~~ 87 (260)
T cd05611 71 YLYLVMEYLNGGDCASL 87 (260)
T ss_pred eEEEEEeccCCCCHHHH
Confidence 57999999999998764
No 172
>cd06644 STKc_STK10_LOK Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase. Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types.
Probab=95.80 E-value=0.066 Score=58.50 Aligned_cols=17 Identities=18% Similarity=0.399 Sum_probs=14.6
Q ss_pred ccEEEEecccCccchhh
Q 002043 672 WPYIITKRCKGKMFAQL 688 (976)
Q Consensus 672 WpYiVm~rl~G~~l~~v 688 (976)
.+|+||++++|..+...
T Consensus 83 ~~~lv~e~~~~~~l~~~ 99 (292)
T cd06644 83 KLWIMIEFCPGGAVDAI 99 (292)
T ss_pred eEEEEEecCCCCcHHHH
Confidence 68999999999987654
No 173
>cd06621 PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=95.78 E-value=0.059 Score=58.82 Aligned_cols=17 Identities=29% Similarity=0.427 Sum_probs=14.6
Q ss_pred CeEEecCCCCCCeEEcc
Q 002043 813 CSWIHSDIMDDNVYMEP 829 (976)
Q Consensus 813 pv~iHgDl~~~NILv~~ 829 (976)
.-++|+||+++||+++.
T Consensus 124 ~~i~H~dl~~~nil~~~ 140 (287)
T cd06621 124 RKIIHRDIKPSNILLTR 140 (287)
T ss_pred CCcccCCCCHHHEEEec
Confidence 35699999999999975
No 174
>cd08225 STKc_Nek5 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown.
Probab=95.75 E-value=0.049 Score=57.69 Aligned_cols=16 Identities=25% Similarity=0.625 Sum_probs=14.3
Q ss_pred eEEecCCCCCCeEEcc
Q 002043 814 SWIHSDIMDDNVYMEP 829 (976)
Q Consensus 814 v~iHgDl~~~NILv~~ 829 (976)
-++|+||+|.||++++
T Consensus 121 ~i~H~dl~~~nil~~~ 136 (257)
T cd08225 121 KILHRDIKSQNIFLSK 136 (257)
T ss_pred CcccccCCHHHEEEcC
Confidence 4799999999999975
No 175
>cd05620 STKc_nPKC_delta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. I
Probab=95.75 E-value=0.037 Score=61.74 Aligned_cols=16 Identities=31% Similarity=0.389 Sum_probs=14.3
Q ss_pred eEEecCCCCCCeEEcc
Q 002043 814 SWIHSDIMDDNVYMEP 829 (976)
Q Consensus 814 v~iHgDl~~~NILv~~ 829 (976)
-++|+||+|+|||++.
T Consensus 116 ~ivHrDlkp~Nil~~~ 131 (316)
T cd05620 116 GIIYRDLKLDNVMLDR 131 (316)
T ss_pred CeEecCCCHHHeEECC
Confidence 4799999999999975
No 176
>cd05066 PTKc_EphR_A Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellul
Probab=95.73 E-value=0.074 Score=57.19 Aligned_cols=16 Identities=19% Similarity=0.613 Sum_probs=14.2
Q ss_pred eEEecCCCCCCeEEcc
Q 002043 814 SWIHSDIMDDNVYMEP 829 (976)
Q Consensus 814 v~iHgDl~~~NILv~~ 829 (976)
-++|+|++|+||+++.
T Consensus 126 ~i~h~dlkp~nili~~ 141 (267)
T cd05066 126 GYVHRDLAARNILVNS 141 (267)
T ss_pred CEeehhhchhcEEECC
Confidence 4799999999999965
No 177
>cd08221 STKc_Nek9 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associa
Probab=95.72 E-value=0.061 Score=57.19 Aligned_cols=16 Identities=25% Similarity=0.513 Sum_probs=14.1
Q ss_pred eEEecCCCCCCeEEcc
Q 002043 814 SWIHSDIMDDNVYMEP 829 (976)
Q Consensus 814 v~iHgDl~~~NILv~~ 829 (976)
-++|+||+|+||+++.
T Consensus 121 ~i~h~dl~p~ni~~~~ 136 (256)
T cd08221 121 GILHRDIKTLNIFLTK 136 (256)
T ss_pred CccccCCChHhEEEeC
Confidence 4689999999999975
No 178
>cd05095 PTKc_DDR2 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 2. Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 2 (DDR2) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR2 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR2 binds mostly to fibrillar collagens. More recently, it has been reported to also bind collagen X. DDR2 is widely expressed in many tissues wit
Probab=95.71 E-value=0.07 Score=58.48 Aligned_cols=17 Identities=18% Similarity=0.440 Sum_probs=14.8
Q ss_pred CeEEecCCCCCCeEEcc
Q 002043 813 CSWIHSDIMDDNVYMEP 829 (976)
Q Consensus 813 pv~iHgDl~~~NILv~~ 829 (976)
.-++|+||+|.||+++.
T Consensus 149 ~~i~H~dlkp~Nili~~ 165 (296)
T cd05095 149 LNFVHRDLATRNCLVGK 165 (296)
T ss_pred CCeecccCChheEEEcC
Confidence 35899999999999965
No 179
>cd05048 PTKc_Ror Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimer
Probab=95.69 E-value=0.073 Score=57.56 Aligned_cols=16 Identities=19% Similarity=0.472 Sum_probs=14.4
Q ss_pred eEEecCCCCCCeEEcc
Q 002043 814 SWIHSDIMDDNVYMEP 829 (976)
Q Consensus 814 v~iHgDl~~~NILv~~ 829 (976)
-++|+||+|+||++++
T Consensus 144 ~i~H~dlkp~Nil~~~ 159 (283)
T cd05048 144 HFVHRDLAARNCLVGE 159 (283)
T ss_pred CeeccccccceEEEcC
Confidence 4799999999999975
No 180
>cd06613 STKc_MAP4K3_like Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activ
Probab=95.69 E-value=0.092 Score=55.81 Aligned_cols=17 Identities=18% Similarity=0.476 Sum_probs=14.6
Q ss_pred ccEEEEecccCccchhh
Q 002043 672 WPYIITKRCKGKMFAQL 688 (976)
Q Consensus 672 WpYiVm~rl~G~~l~~v 688 (976)
-.|++|++++|.++.+.
T Consensus 74 ~~~l~~e~~~~~~l~~~ 90 (262)
T cd06613 74 KLWIVMEYCGGGSLQDI 90 (262)
T ss_pred EEEEEEeCCCCCcHHHH
Confidence 37999999999998764
No 181
>cd05586 STKc_Sck1_like Catalytic domain of Suppressor of loss of cAMP-dependent protein kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Fission yeast Suppressor of loss of cAMP-dependent protein kinase (Sck1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sck1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the Schizosaccharomyces pombe STK Sck1. Sck1 plays a role in trehalase activation triggered by glucose and a nitrogen source. Trehalase catalyzes the cleavage of the disaccharide trehalose to glucose. Trehalose, as a carbohydrate reserve and stress metabolite, plays an important role in the response of
Probab=95.68 E-value=0.054 Score=60.61 Aligned_cols=16 Identities=13% Similarity=0.422 Sum_probs=14.3
Q ss_pred eEEecCCCCCCeEEcc
Q 002043 814 SWIHSDIMDDNVYMEP 829 (976)
Q Consensus 814 v~iHgDl~~~NILv~~ 829 (976)
-++|+||+|+|||++.
T Consensus 116 ~ivHrDlkp~Nili~~ 131 (330)
T cd05586 116 DIVYRDLKPENILLDA 131 (330)
T ss_pred CeEeccCCHHHeEECC
Confidence 4799999999999975
No 182
>cd05055 PTKc_PDGFR Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to recept
Probab=95.66 E-value=0.054 Score=59.92 Aligned_cols=16 Identities=31% Similarity=0.515 Sum_probs=14.2
Q ss_pred eEEecCCCCCCeEEcc
Q 002043 814 SWIHSDIMDDNVYMEP 829 (976)
Q Consensus 814 v~iHgDl~~~NILv~~ 829 (976)
.++|+|++|+||+++.
T Consensus 161 ~ivH~dlkp~Nil~~~ 176 (302)
T cd05055 161 NCIHRDLAARNVLLTH 176 (302)
T ss_pred CeehhhhccceEEEcC
Confidence 4699999999999965
No 183
>cd06620 PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=95.66 E-value=0.066 Score=58.24 Aligned_cols=18 Identities=0% Similarity=-0.175 Sum_probs=15.1
Q ss_pred CccEEEEecccCccchhh
Q 002043 671 IWPYIITKRCKGKMFAQL 688 (976)
Q Consensus 671 ~WpYiVm~rl~G~~l~~v 688 (976)
..+|+||++++|..|.+.
T Consensus 76 ~~~~lv~e~~~~~~L~~~ 93 (284)
T cd06620 76 NNICMCMEFMDCGSLDRI 93 (284)
T ss_pred CEEEEEEecCCCCCHHHH
Confidence 368999999999988764
No 184
>cd08228 STKc_Nek6 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 6. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 is required for the transition from metaphase to anaphase. It also plays important roles in mitotic spindle formation and cytokinesis. Activated by Nek9 during mitosis, Nek6 phosphorylates Eg5, a kinesin that is important for spindle bipolarity. Nek6 localizes to spindle microtubules during metaphase
Probab=95.66 E-value=0.064 Score=57.38 Aligned_cols=18 Identities=11% Similarity=0.010 Sum_probs=15.0
Q ss_pred ccEEEEecccCccchhhh
Q 002043 672 WPYIITKRCKGKMFAQLR 689 (976)
Q Consensus 672 WpYiVm~rl~G~~l~~v~ 689 (976)
..|+||++++|.++.++.
T Consensus 76 ~~~~v~e~~~~~~L~~~~ 93 (267)
T cd08228 76 ELNIVLELADAGDLSQMI 93 (267)
T ss_pred eEEEEEEecCCCcHHHHH
Confidence 579999999998887653
No 185
>cd08220 STKc_Nek8 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with
Probab=95.64 E-value=0.08 Score=56.07 Aligned_cols=16 Identities=19% Similarity=0.490 Sum_probs=14.3
Q ss_pred eEEecCCCCCCeEEcc
Q 002043 814 SWIHSDIMDDNVYMEP 829 (976)
Q Consensus 814 v~iHgDl~~~NILv~~ 829 (976)
-++|+||.|+||++++
T Consensus 121 ~i~h~dl~~~nil~~~ 136 (256)
T cd08220 121 LILHRDLKTQNILLDK 136 (256)
T ss_pred CeecCCCCHHHEEEcC
Confidence 5799999999999975
No 186
>cd05101 PTKc_FGFR2 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 2 (FGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR2 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=95.60 E-value=0.063 Score=59.07 Aligned_cols=16 Identities=31% Similarity=0.486 Sum_probs=14.4
Q ss_pred eEEecCCCCCCeEEcc
Q 002043 814 SWIHSDIMDDNVYMEP 829 (976)
Q Consensus 814 v~iHgDl~~~NILv~~ 829 (976)
-++|+||+|+||+++.
T Consensus 157 givH~dlkp~Nili~~ 172 (304)
T cd05101 157 KCIHRDLAARNVLVTE 172 (304)
T ss_pred CeeecccccceEEEcC
Confidence 4799999999999975
No 187
>cd05052 PTKc_Abl Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase. Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays
Probab=95.57 E-value=0.091 Score=56.38 Aligned_cols=16 Identities=25% Similarity=0.513 Sum_probs=14.3
Q ss_pred eEEecCCCCCCeEEcc
Q 002043 814 SWIHSDIMDDNVYMEP 829 (976)
Q Consensus 814 v~iHgDl~~~NILv~~ 829 (976)
-++|+||+|.||++++
T Consensus 124 ~i~H~dlkp~nil~~~ 139 (263)
T cd05052 124 NFIHRDLAARNCLVGE 139 (263)
T ss_pred CEeecccCcceEEEcC
Confidence 4799999999999975
No 188
>cd05093 PTKc_TrkB Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly
Probab=95.55 E-value=0.087 Score=57.51 Aligned_cols=17 Identities=18% Similarity=0.403 Sum_probs=14.9
Q ss_pred CeEEecCCCCCCeEEcc
Q 002043 813 CSWIHSDIMDDNVYMEP 829 (976)
Q Consensus 813 pv~iHgDl~~~NILv~~ 829 (976)
.-++|+||+|.||+++.
T Consensus 139 ~~i~H~dlkp~Nili~~ 155 (288)
T cd05093 139 QHFVHRDLATRNCLVGE 155 (288)
T ss_pred CCeeecccCcceEEEcc
Confidence 45799999999999975
No 189
>cd00192 PTKc Catalytic domain of Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligan
Probab=95.54 E-value=0.11 Score=54.91 Aligned_cols=18 Identities=11% Similarity=0.128 Sum_probs=15.2
Q ss_pred ccEEEEecccCccchhhh
Q 002043 672 WPYIITKRCKGKMFAQLR 689 (976)
Q Consensus 672 WpYiVm~rl~G~~l~~v~ 689 (976)
..|+||++++|.+|.+..
T Consensus 70 ~~~lv~e~~~~~~L~~~l 87 (262)
T cd00192 70 PLYLVLEYMEGGDLLDYL 87 (262)
T ss_pred ceEEEEEeccCCcHHHHH
Confidence 579999999999987743
No 190
>cd05613 STKc_MSK1_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 1. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK1, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph
Probab=95.54 E-value=0.097 Score=57.03 Aligned_cols=16 Identities=25% Similarity=0.397 Sum_probs=14.3
Q ss_pred eEEecCCCCCCeEEcc
Q 002043 814 SWIHSDIMDDNVYMEP 829 (976)
Q Consensus 814 v~iHgDl~~~NILv~~ 829 (976)
-++|+||+|.|||++.
T Consensus 125 ~i~H~dl~p~nil~~~ 140 (290)
T cd05613 125 GIIYRDIKLENILLDS 140 (290)
T ss_pred CeeccCCCHHHeEECC
Confidence 4799999999999975
No 191
>cd05104 PTKc_Kit Catalytic domain of the Protein Tyrosine Kinase, Kit. Protein Tyrosine Kinase (PTK) family; Kit (or c-Kit); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Kit is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of Kit to its ligand, the stem-cell factor (SCF), leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem ce
Probab=95.53 E-value=0.065 Score=61.59 Aligned_cols=17 Identities=24% Similarity=0.425 Sum_probs=14.7
Q ss_pred CeEEecCCCCCCeEEcc
Q 002043 813 CSWIHSDIMDDNVYMEP 829 (976)
Q Consensus 813 pv~iHgDl~~~NILv~~ 829 (976)
.-++|+||+|.|||++.
T Consensus 233 ~~ivH~Dlkp~Nill~~ 249 (375)
T cd05104 233 KNCIHRDLAARNILLTH 249 (375)
T ss_pred CCeeccCCchhhEEEEC
Confidence 34799999999999975
No 192
>cd05114 PTKc_Tec_Rlk Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin h
Probab=95.53 E-value=0.1 Score=55.64 Aligned_cols=16 Identities=31% Similarity=0.580 Sum_probs=14.3
Q ss_pred eEEecCCCCCCeEEcc
Q 002043 814 SWIHSDIMDDNVYMEP 829 (976)
Q Consensus 814 v~iHgDl~~~NILv~~ 829 (976)
-++|+||+|+||+++.
T Consensus 120 ~i~H~dl~p~ni~i~~ 135 (256)
T cd05114 120 SFIHRDLAARNCLVSS 135 (256)
T ss_pred CccccccCcceEEEcC
Confidence 4799999999999975
No 193
>cd08223 STKc_Nek4 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 4. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 4 (Nek4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek4 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Nek4 is highly abundant in the testis. Its specific function is unknown.
Probab=95.53 E-value=0.09 Score=55.81 Aligned_cols=17 Identities=24% Similarity=0.489 Sum_probs=14.7
Q ss_pred CeEEecCCCCCCeEEcc
Q 002043 813 CSWIHSDIMDDNVYMEP 829 (976)
Q Consensus 813 pv~iHgDl~~~NILv~~ 829 (976)
.-++|+||+|.||+++.
T Consensus 121 ~~i~H~di~p~nil~~~ 137 (257)
T cd08223 121 KHILHRDLKTQNVFLTR 137 (257)
T ss_pred CCeeccCCCchhEEEec
Confidence 35799999999999965
No 194
>cd05570 STKc_PKC Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C. Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only re
Probab=95.51 E-value=0.048 Score=60.83 Aligned_cols=16 Identities=31% Similarity=0.420 Sum_probs=14.3
Q ss_pred eEEecCCCCCCeEEcc
Q 002043 814 SWIHSDIMDDNVYMEP 829 (976)
Q Consensus 814 v~iHgDl~~~NILv~~ 829 (976)
-++|+||+|+||+++.
T Consensus 116 ~ivH~dlkp~Nill~~ 131 (318)
T cd05570 116 GIIYRDLKLDNVLLDS 131 (318)
T ss_pred CeEccCCCHHHeEECC
Confidence 4699999999999975
No 195
>cd05116 PTKc_Syk Catalytic domain of the Protein Tyrosine Kinase, Spleen tyrosine kinase. Protein Tyrosine Kinase (PTK) family; Spleen tyrosine kinase (Syk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk, together with Zap-70, form the Syk subfamily of kinases which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Syk was first cloned from the spleen, and its function in hematopoietic cells is well-established. Syk is involved in the signaling downstream of activated receptors (including B-cell and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferatio
Probab=95.50 E-value=0.12 Score=55.34 Aligned_cols=16 Identities=25% Similarity=0.580 Sum_probs=14.3
Q ss_pred eEEecCCCCCCeEEcc
Q 002043 814 SWIHSDIMDDNVYMEP 829 (976)
Q Consensus 814 v~iHgDl~~~NILv~~ 829 (976)
-++|+||+|.||++++
T Consensus 115 ~i~H~dlkp~nill~~ 130 (257)
T cd05116 115 NFVHRDLAARNVLLVT 130 (257)
T ss_pred CEeecccchhhEEEcC
Confidence 4799999999999975
No 196
>PRK13184 pknD serine/threonine-protein kinase; Reviewed
Probab=95.50 E-value=0.07 Score=68.15 Aligned_cols=17 Identities=18% Similarity=0.129 Sum_probs=14.9
Q ss_pred ccEEEEecccCccchhh
Q 002043 672 WPYIITKRCKGKMFAQL 688 (976)
Q Consensus 672 WpYiVm~rl~G~~l~~v 688 (976)
..|+||++++|.+|.++
T Consensus 76 ~lyLVMEY~eGGSL~~l 92 (932)
T PRK13184 76 PVYYTMPYIEGYTLKSL 92 (932)
T ss_pred EEEEEEEcCCCCCHHHH
Confidence 57999999999988764
No 197
>cd05577 STKc_GRK Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of
Probab=95.49 E-value=0.072 Score=57.69 Aligned_cols=16 Identities=19% Similarity=0.393 Sum_probs=14.1
Q ss_pred eEEecCCCCCCeEEcc
Q 002043 814 SWIHSDIMDDNVYMEP 829 (976)
Q Consensus 814 v~iHgDl~~~NILv~~ 829 (976)
-++|+||+|+||++++
T Consensus 115 ~i~H~di~p~Nil~~~ 130 (277)
T cd05577 115 RIVYRDLKPENVLLDD 130 (277)
T ss_pred CcccCCCCHHHEEECC
Confidence 3699999999999975
No 198
>cd05616 STKc_cPKC_beta Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C beta. Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, beta isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and
Probab=95.49 E-value=0.052 Score=60.67 Aligned_cols=16 Identities=31% Similarity=0.416 Sum_probs=14.4
Q ss_pred eEEecCCCCCCeEEcc
Q 002043 814 SWIHSDIMDDNVYMEP 829 (976)
Q Consensus 814 v~iHgDl~~~NILv~~ 829 (976)
-++|+||+|+|||++.
T Consensus 121 ~ivHrDlkp~Nill~~ 136 (323)
T cd05616 121 GIIYRDLKLDNVMLDS 136 (323)
T ss_pred CEEecCCCHHHeEECC
Confidence 4799999999999975
No 199
>cd05057 PTKc_EGFR_like Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instea
Probab=95.48 E-value=0.12 Score=56.05 Aligned_cols=17 Identities=24% Similarity=0.423 Sum_probs=14.9
Q ss_pred CeEEecCCCCCCeEEcc
Q 002043 813 CSWIHSDIMDDNVYMEP 829 (976)
Q Consensus 813 pv~iHgDl~~~NILv~~ 829 (976)
.-++|+|++|+||+++.
T Consensus 128 ~~i~H~di~p~nil~~~ 144 (279)
T cd05057 128 KRLVHRDLAARNVLVKT 144 (279)
T ss_pred CCEEecccCcceEEEcC
Confidence 46799999999999964
No 200
>cd05082 PTKc_Csk Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase. Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, re
Probab=95.48 E-value=0.12 Score=55.09 Aligned_cols=16 Identities=25% Similarity=0.586 Sum_probs=14.4
Q ss_pred eEEecCCCCCCeEEcc
Q 002043 814 SWIHSDIMDDNVYMEP 829 (976)
Q Consensus 814 v~iHgDl~~~NILv~~ 829 (976)
-++|+||+|.||+++.
T Consensus 122 ~i~H~dlkp~nil~~~ 137 (256)
T cd05082 122 NFVHRDLAARNVLVSE 137 (256)
T ss_pred CEeccccchheEEEcC
Confidence 4799999999999975
No 201
>cd05033 PTKc_EphR Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment
Probab=95.47 E-value=0.088 Score=56.49 Aligned_cols=17 Identities=18% Similarity=0.569 Sum_probs=14.7
Q ss_pred CeEEecCCCCCCeEEcc
Q 002043 813 CSWIHSDIMDDNVYMEP 829 (976)
Q Consensus 813 pv~iHgDl~~~NILv~~ 829 (976)
.-++|+|++|.||++++
T Consensus 125 ~~i~H~di~p~nili~~ 141 (266)
T cd05033 125 MNYVHRDLAARNILVNS 141 (266)
T ss_pred CCcccCCCCcceEEEcC
Confidence 34799999999999975
No 202
>cd05619 STKc_nPKC_theta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in
Probab=95.45 E-value=0.056 Score=60.38 Aligned_cols=16 Identities=19% Similarity=0.389 Sum_probs=14.3
Q ss_pred eEEecCCCCCCeEEcc
Q 002043 814 SWIHSDIMDDNVYMEP 829 (976)
Q Consensus 814 v~iHgDl~~~NILv~~ 829 (976)
-++|+||+|+|||++.
T Consensus 116 ~ivHrdikp~Nil~~~ 131 (316)
T cd05619 116 GIVYRDLKLDNILLDT 131 (316)
T ss_pred CeEeCCCCHHHEEECC
Confidence 4799999999999975
No 203
>cd08217 STKc_Nek2 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exi
Probab=95.44 E-value=0.11 Score=55.05 Aligned_cols=18 Identities=17% Similarity=0.501 Sum_probs=15.7
Q ss_pred CCeEEecCCCCCCeEEcc
Q 002043 812 PCSWIHSDIMDDNVYMEP 829 (976)
Q Consensus 812 ~pv~iHgDl~~~NILv~~ 829 (976)
...++|+||+|+||+++.
T Consensus 128 ~~~i~h~dl~p~nili~~ 145 (265)
T cd08217 128 GNTVLHRDLKPANIFLDA 145 (265)
T ss_pred cCcceecCCCHHHEEEec
Confidence 456799999999999975
No 204
>cd05041 PTKc_Fes_like Catalytic domain of Fes-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr k
Probab=95.43 E-value=0.11 Score=54.89 Aligned_cols=16 Identities=25% Similarity=0.418 Sum_probs=14.4
Q ss_pred eEEecCCCCCCeEEcc
Q 002043 814 SWIHSDIMDDNVYMEP 829 (976)
Q Consensus 814 v~iHgDl~~~NILv~~ 829 (976)
.++|+|++|.||+++.
T Consensus 113 ~i~h~di~p~nili~~ 128 (251)
T cd05041 113 NCIHRDLAARNCLVGE 128 (251)
T ss_pred CEehhhcCcceEEEcC
Confidence 5799999999999975
No 205
>cd05631 STKc_GRK4 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 4. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK4 has a limited tissue distribution. It is mainly found i
Probab=95.42 E-value=0.081 Score=57.84 Aligned_cols=17 Identities=12% Similarity=0.305 Sum_probs=14.7
Q ss_pred CeEEecCCCCCCeEEcc
Q 002043 813 CSWIHSDIMDDNVYMEP 829 (976)
Q Consensus 813 pv~iHgDl~~~NILv~~ 829 (976)
.-++|+||+|.|||++.
T Consensus 121 ~~iiH~dikp~Nill~~ 137 (285)
T cd05631 121 ERIVYRDLKPENILLDD 137 (285)
T ss_pred CCEEeCCCCHHHEEECC
Confidence 35799999999999965
No 206
>cd05623 STKc_MRCK_alpha Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase alpha. Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKalpha is expressed ubiquitously in many tissues. It plays a role in the regulation of peripheral actin reorganization and neurite outgrowth. It may also play a role in the transferrin iron uptake pathw
Probab=95.42 E-value=0.052 Score=60.93 Aligned_cols=16 Identities=38% Similarity=0.742 Sum_probs=14.2
Q ss_pred eEEecCCCCCCeEEcc
Q 002043 814 SWIHSDIMDDNVYMEP 829 (976)
Q Consensus 814 v~iHgDl~~~NILv~~ 829 (976)
-++|+||+|+|||++.
T Consensus 122 ~iiHrDlkp~Nili~~ 137 (332)
T cd05623 122 HYVHRDIKPDNILMDM 137 (332)
T ss_pred CeEecCCCHHHEEECC
Confidence 4699999999999975
No 207
>cd05099 PTKc_FGFR4 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 4. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 4 (FGFR4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR4 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=95.42 E-value=0.084 Score=58.56 Aligned_cols=17 Identities=29% Similarity=0.409 Sum_probs=14.7
Q ss_pred CeEEecCCCCCCeEEcc
Q 002043 813 CSWIHSDIMDDNVYMEP 829 (976)
Q Consensus 813 pv~iHgDl~~~NILv~~ 829 (976)
.-++|+||+|+||+++.
T Consensus 153 ~gi~H~dlkp~Nill~~ 169 (314)
T cd05099 153 RRCIHRDLAARNVLVTE 169 (314)
T ss_pred CCeeeccccceeEEEcC
Confidence 35699999999999965
No 208
>cd08215 STKc_Nek Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They
Probab=95.41 E-value=0.099 Score=54.97 Aligned_cols=16 Identities=25% Similarity=0.615 Sum_probs=14.5
Q ss_pred eEEecCCCCCCeEEcc
Q 002043 814 SWIHSDIMDDNVYMEP 829 (976)
Q Consensus 814 v~iHgDl~~~NILv~~ 829 (976)
-++|+||+++||++++
T Consensus 123 ~~~H~dl~~~nil~~~ 138 (258)
T cd08215 123 KILHRDIKPQNIFLTS 138 (258)
T ss_pred CEecccCChHHeEEcC
Confidence 5699999999999975
No 209
>cd05607 STKc_GRK7 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 7. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK7 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK7, also called iodopsin kinase, belongs to the visual gr
Probab=95.36 E-value=0.1 Score=56.84 Aligned_cols=17 Identities=18% Similarity=0.360 Sum_probs=14.8
Q ss_pred CeEEecCCCCCCeEEcc
Q 002043 813 CSWIHSDIMDDNVYMEP 829 (976)
Q Consensus 813 pv~iHgDl~~~NILv~~ 829 (976)
.-++|+||+|.||+++.
T Consensus 114 ~~ivH~dikp~Nili~~ 130 (277)
T cd05607 114 MDIVYRDMKPENVLLDD 130 (277)
T ss_pred CCEEEccCChHhEEEcC
Confidence 34799999999999975
No 210
>cd07878 STKc_p38beta_MAPK11 Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38beta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38beta, also called MAPK11, is
Probab=95.36 E-value=0.082 Score=59.42 Aligned_cols=16 Identities=31% Similarity=0.445 Sum_probs=14.3
Q ss_pred eEEecCCCCCCeEEcc
Q 002043 814 SWIHSDIMDDNVYMEP 829 (976)
Q Consensus 814 v~iHgDl~~~NILv~~ 829 (976)
-++|+||+|+||+++.
T Consensus 138 ~ivHrdikp~Nil~~~ 153 (343)
T cd07878 138 GIIHRDLKPSNVAVNE 153 (343)
T ss_pred CeecccCChhhEEECC
Confidence 4699999999999975
No 211
>cd05034 PTKc_Src_like Catalytic domain of Src kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-t
Probab=95.36 E-value=0.11 Score=55.31 Aligned_cols=16 Identities=25% Similarity=0.588 Sum_probs=14.2
Q ss_pred eEEecCCCCCCeEEcc
Q 002043 814 SWIHSDIMDDNVYMEP 829 (976)
Q Consensus 814 v~iHgDl~~~NILv~~ 829 (976)
-++|+|++|+||++++
T Consensus 123 ~i~h~di~p~nili~~ 138 (261)
T cd05034 123 NYIHRDLAARNILVGE 138 (261)
T ss_pred CcccCCcchheEEEcC
Confidence 3799999999999975
No 212
>cd05580 STKc_PKA Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase. Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubi
Probab=95.35 E-value=0.11 Score=56.80 Aligned_cols=17 Identities=12% Similarity=0.344 Sum_probs=14.7
Q ss_pred CeEEecCCCCCCeEEcc
Q 002043 813 CSWIHSDIMDDNVYMEP 829 (976)
Q Consensus 813 pv~iHgDl~~~NILv~~ 829 (976)
.-++|+||+|.||+++.
T Consensus 120 ~~i~H~dl~p~nili~~ 136 (290)
T cd05580 120 LDIVYRDLKPENLLLDS 136 (290)
T ss_pred CCEecCCCCHHHEEECC
Confidence 34799999999999975
No 213
>cd06615 PKc_MEK Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase. Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the down
Probab=95.35 E-value=0.11 Score=57.44 Aligned_cols=16 Identities=19% Similarity=0.472 Sum_probs=14.4
Q ss_pred eEEecCCCCCCeEEcc
Q 002043 814 SWIHSDIMDDNVYMEP 829 (976)
Q Consensus 814 v~iHgDl~~~NILv~~ 829 (976)
-++|+||+|+|||+++
T Consensus 120 ~i~H~dl~p~nil~~~ 135 (308)
T cd06615 120 KIMHRDVKPSNILVNS 135 (308)
T ss_pred CEEECCCChHHEEEec
Confidence 4799999999999975
No 214
>KOG0032 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]
Probab=95.33 E-value=0.12 Score=60.07 Aligned_cols=41 Identities=20% Similarity=0.395 Sum_probs=25.3
Q ss_pred cEEEEecccCccc-hhhhhc-CCHHHHHHHHHHHHHHHHHhhC
Q 002043 673 PYIITKRCKGKMF-AQLRDA-LSGEDVLNLASFLGEQLRNLHL 713 (976)
Q Consensus 673 pYiVm~rl~G~~l-~~v~~~-Ls~ed~~~La~~LG~~L~~LHs 713 (976)
-|+|||.|.|-.| ..+... +++.+...++.++.+-++.||+
T Consensus 111 ~~lvmEL~~GGeLfd~i~~~~~sE~da~~~~~~il~av~~lH~ 153 (382)
T KOG0032|consen 111 VYLVMELCEGGELFDRIVKKHYSERDAAGIIRQILEAVKYLHS 153 (382)
T ss_pred EEEEEEecCCchHHHHHHHccCCHHHHHHHHHHHHHHHHHHHh
Confidence 4999999998554 444444 5555555555555555555553
No 215
>cd07832 STKc_CCRK Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase. Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of hea
Probab=95.33 E-value=0.12 Score=55.91 Aligned_cols=16 Identities=19% Similarity=0.430 Sum_probs=14.1
Q ss_pred eEEecCCCCCCeEEcc
Q 002043 814 SWIHSDIMDDNVYMEP 829 (976)
Q Consensus 814 v~iHgDl~~~NILv~~ 829 (976)
-++|+||+|+||++++
T Consensus 119 ~i~H~dl~p~ni~~~~ 134 (286)
T cd07832 119 GIMHRDLKPANLLISA 134 (286)
T ss_pred CeecCCcCHHHEEEcC
Confidence 3699999999999975
No 216
>cd05106 PTKc_CSF-1R Catalytic domain of the Protein Tyrosine Kinase, Colony-Stimulating Factor-1 Receptor. Protein Tyrosine Kinase (PTK) family; Colony-Stimulating Factor-1 Receptor (CSF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CSF-1R, also called c-Fms, is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of CSF-1R to its ligand, CSF-1, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. CSF-1R signaling is criti
Probab=95.32 E-value=0.067 Score=61.49 Aligned_cols=17 Identities=29% Similarity=0.444 Sum_probs=14.7
Q ss_pred CeEEecCCCCCCeEEcc
Q 002043 813 CSWIHSDIMDDNVYMEP 829 (976)
Q Consensus 813 pv~iHgDl~~~NILv~~ 829 (976)
.-++|+||+|.|||+++
T Consensus 231 ~giiHrDLkp~Nil~~~ 247 (374)
T cd05106 231 KNCIHRDVAARNVLLTD 247 (374)
T ss_pred CCEEeccCchheEEEeC
Confidence 34799999999999975
No 217
>cd07837 STKc_CdkB_plant Catalytic domain of the Serine/Threonine Kinase, Plant B-type Cyclin-Dependent protein Kinase. Serine/Threonine Kinases (STKs), Plant B-type Cyclin-Dependent protein Kinase (CdkB) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CdkB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The plant-specific B-type CDKs are expressed from the late S to the M phase of the cell cycle. They are characterized by the cyclin binding motif PPT[A/T]LRE. They play a role in controlling mitosis and integrating developm
Probab=95.31 E-value=0.11 Score=56.65 Aligned_cols=16 Identities=19% Similarity=0.453 Sum_probs=14.4
Q ss_pred eEEecCCCCCCeEEcc
Q 002043 814 SWIHSDIMDDNVYMEP 829 (976)
Q Consensus 814 v~iHgDl~~~NILv~~ 829 (976)
-++|+||+|+||+++.
T Consensus 130 ~i~H~dl~~~nil~~~ 145 (295)
T cd07837 130 GVMHRDLKPQNLLVDK 145 (295)
T ss_pred CeeecCCChHHEEEec
Confidence 4799999999999975
No 218
>cd07847 STKc_CDKL1_4 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The functio
Probab=95.30 E-value=0.13 Score=55.42 Aligned_cols=15 Identities=27% Similarity=0.576 Sum_probs=13.5
Q ss_pred EEecCCCCCCeEEcc
Q 002043 815 WIHSDIMDDNVYMEP 829 (976)
Q Consensus 815 ~iHgDl~~~NILv~~ 829 (976)
++|+||+|.||+++.
T Consensus 121 i~H~dl~p~nil~~~ 135 (286)
T cd07847 121 CIHRDVKPENILITK 135 (286)
T ss_pred ceecCCChhhEEEcC
Confidence 589999999999975
No 219
>cd05572 STKc_cGK_PKG Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase. Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowi
Probab=95.28 E-value=0.11 Score=55.40 Aligned_cols=17 Identities=18% Similarity=0.346 Sum_probs=14.5
Q ss_pred CeEEecCCCCCCeEEcc
Q 002043 813 CSWIHSDIMDDNVYMEP 829 (976)
Q Consensus 813 pv~iHgDl~~~NILv~~ 829 (976)
.-++|+||++.||+++.
T Consensus 112 ~~~~h~dl~~~nilv~~ 128 (262)
T cd05572 112 RGIIYRDLKPENLLLDS 128 (262)
T ss_pred CCcccCCCCHHHEEEcC
Confidence 45699999999999965
No 220
>cd06610 STKc_OSR1_SPAK Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase. Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1
Probab=95.26 E-value=0.11 Score=55.32 Aligned_cols=16 Identities=31% Similarity=0.480 Sum_probs=14.3
Q ss_pred eEEecCCCCCCeEEcc
Q 002043 814 SWIHSDIMDDNVYMEP 829 (976)
Q Consensus 814 v~iHgDl~~~NILv~~ 829 (976)
-++|+||.|.||++++
T Consensus 122 ~i~h~~l~p~ni~~~~ 137 (267)
T cd06610 122 GQIHRDIKAGNILLGE 137 (267)
T ss_pred CeecCCCCHHhEEEcC
Confidence 4699999999999975
No 221
>cd05075 PTKc_Axl Catalytic domain of the Protein Tyrosine Kinase, Axl. Protein Tyrosine Kinase (PTK) family; Axl; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl is widely expressed in a variety of organs and cells including epithelial, mesenchymal, hematopoietic, as well as non-transfor
Probab=95.26 E-value=0.14 Score=54.93 Aligned_cols=17 Identities=29% Similarity=0.507 Sum_probs=14.7
Q ss_pred CeEEecCCCCCCeEEcc
Q 002043 813 CSWIHSDIMDDNVYMEP 829 (976)
Q Consensus 813 pv~iHgDl~~~NILv~~ 829 (976)
.-++|+||+|+||++++
T Consensus 131 ~~i~H~dlkp~Nil~~~ 147 (272)
T cd05075 131 KSFIHRDLAARNCMLNE 147 (272)
T ss_pred CCeeccccchhheEEcC
Confidence 34799999999999965
No 222
>cd05065 PTKc_EphR_B Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; class EphB receptors; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephr
Probab=95.26 E-value=0.14 Score=55.11 Aligned_cols=16 Identities=19% Similarity=0.623 Sum_probs=14.2
Q ss_pred eEEecCCCCCCeEEcc
Q 002043 814 SWIHSDIMDDNVYMEP 829 (976)
Q Consensus 814 v~iHgDl~~~NILv~~ 829 (976)
-++|+|++|.||++++
T Consensus 126 g~~H~dl~p~nili~~ 141 (269)
T cd05065 126 NYVHRDLAARNILVNS 141 (269)
T ss_pred CEeecccChheEEEcC
Confidence 4699999999999975
No 223
>cd05049 PTKc_Trk Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalyt
Probab=95.25 E-value=0.14 Score=55.26 Aligned_cols=16 Identities=19% Similarity=0.424 Sum_probs=14.4
Q ss_pred eEEecCCCCCCeEEcc
Q 002043 814 SWIHSDIMDDNVYMEP 829 (976)
Q Consensus 814 v~iHgDl~~~NILv~~ 829 (976)
-++|+||+|+||+++.
T Consensus 142 ~i~h~dlkp~nili~~ 157 (280)
T cd05049 142 HFVHRDLATRNCLVGY 157 (280)
T ss_pred CeeccccccceEEEcC
Confidence 4799999999999975
No 224
>cd05067 PTKc_Lck_Blk Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk. Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Sr
Probab=95.25 E-value=0.13 Score=54.87 Aligned_cols=16 Identities=25% Similarity=0.588 Sum_probs=14.2
Q ss_pred eEEecCCCCCCeEEcc
Q 002043 814 SWIHSDIMDDNVYMEP 829 (976)
Q Consensus 814 v~iHgDl~~~NILv~~ 829 (976)
-++|+||+|.||+++.
T Consensus 122 ~i~H~dl~p~ni~i~~ 137 (260)
T cd05067 122 NYIHRDLRAANILVSE 137 (260)
T ss_pred CeecccccHHhEEEcC
Confidence 4699999999999975
No 225
>cd06917 STKc_NAK1_like Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of cent
Probab=95.25 E-value=0.11 Score=56.06 Aligned_cols=16 Identities=31% Similarity=0.455 Sum_probs=14.2
Q ss_pred eEEecCCCCCCeEEcc
Q 002043 814 SWIHSDIMDDNVYMEP 829 (976)
Q Consensus 814 v~iHgDl~~~NILv~~ 829 (976)
-++|+||.|+||+++.
T Consensus 121 ~i~H~dl~p~ni~i~~ 136 (277)
T cd06917 121 GVIHRDIKAANILVTN 136 (277)
T ss_pred CcccCCcCHHHEEEcC
Confidence 4699999999999975
No 226
>cd07863 STKc_CDK4 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitou
Probab=95.23 E-value=0.13 Score=55.69 Aligned_cols=16 Identities=19% Similarity=0.503 Sum_probs=14.4
Q ss_pred eEEecCCCCCCeEEcc
Q 002043 814 SWIHSDIMDDNVYMEP 829 (976)
Q Consensus 814 v~iHgDl~~~NILv~~ 829 (976)
-++|+||+|+||+++.
T Consensus 128 ~ivH~dikp~Nili~~ 143 (288)
T cd07863 128 CIVHRDLKPENILVTS 143 (288)
T ss_pred CeecCCCCHHHEEECC
Confidence 4799999999999975
No 227
>cd05039 PTKc_Csk_like Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk
Probab=95.23 E-value=0.12 Score=55.10 Aligned_cols=17 Identities=24% Similarity=0.497 Sum_probs=14.7
Q ss_pred CeEEecCCCCCCeEEcc
Q 002043 813 CSWIHSDIMDDNVYMEP 829 (976)
Q Consensus 813 pv~iHgDl~~~NILv~~ 829 (976)
.-++|+||+|+||+++.
T Consensus 121 ~~i~H~di~p~Nili~~ 137 (256)
T cd05039 121 KNFVHRDLAARNVLVSE 137 (256)
T ss_pred CCccchhcccceEEEeC
Confidence 34799999999999975
No 228
>cd05047 PTKc_Tie Catalytic domain of Tie Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Tie subfamily; catalytic (c) domain. The Tie subfamily consists of Tie1 and Tie2. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie proteins are receptor tyr kinases (RTKs) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2, while no specific l
Probab=95.21 E-value=0.13 Score=55.39 Aligned_cols=17 Identities=24% Similarity=0.475 Sum_probs=15.1
Q ss_pred CeEEecCCCCCCeEEcc
Q 002043 813 CSWIHSDIMDDNVYMEP 829 (976)
Q Consensus 813 pv~iHgDl~~~NILv~~ 829 (976)
.-++|+||+|.||+++.
T Consensus 131 ~~i~H~dikp~nili~~ 147 (270)
T cd05047 131 KQFIHRDLAARNILVGE 147 (270)
T ss_pred CCEeecccccceEEEcC
Confidence 46799999999999975
No 229
>cd06619 PKc_MKK5 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5. Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that p
Probab=95.19 E-value=0.13 Score=55.97 Aligned_cols=16 Identities=19% Similarity=0.441 Sum_probs=14.2
Q ss_pred eEEecCCCCCCeEEcc
Q 002043 814 SWIHSDIMDDNVYMEP 829 (976)
Q Consensus 814 v~iHgDl~~~NILv~~ 829 (976)
-++|+||+|+||+++.
T Consensus 115 ~i~H~dlkp~Nill~~ 130 (279)
T cd06619 115 KILHRDVKPSNMLVNT 130 (279)
T ss_pred CEeeCCCCHHHEEECC
Confidence 4699999999999975
No 230
>cd06642 STKc_STK25-YSK1 Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1. Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25
Probab=95.17 E-value=0.13 Score=55.53 Aligned_cols=17 Identities=35% Similarity=0.384 Sum_probs=14.7
Q ss_pred CeEEecCCCCCCeEEcc
Q 002043 813 CSWIHSDIMDDNVYMEP 829 (976)
Q Consensus 813 pv~iHgDl~~~NILv~~ 829 (976)
.-++|+||+|+||++..
T Consensus 120 ~~ivH~dl~p~ni~i~~ 136 (277)
T cd06642 120 ERKIHRDIKAANVLLSE 136 (277)
T ss_pred CCeeccCCChheEEEeC
Confidence 35799999999999975
No 231
>cd05061 PTKc_InsR Catalytic domain of the Protein Tyrosine Kinase, Insulin Receptor. Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR is a receptor tyr kinase (RTK) that is composed of two alphabeta heterodimers. Binding of the insulin ligand to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR signaling plays an important role in many cellular processes including glucose homeostasis, glycogen synthesis, lipid and protein meta
Probab=95.17 E-value=0.13 Score=56.11 Aligned_cols=17 Identities=18% Similarity=0.395 Sum_probs=14.9
Q ss_pred CeEEecCCCCCCeEEcc
Q 002043 813 CSWIHSDIMDDNVYMEP 829 (976)
Q Consensus 813 pv~iHgDl~~~NILv~~ 829 (976)
.-++|+|++|.||+++.
T Consensus 138 ~~i~H~dikp~nili~~ 154 (288)
T cd05061 138 KKFVHRDLAARNCMVAH 154 (288)
T ss_pred CCCcCCCCChheEEEcC
Confidence 45799999999999975
No 232
>PF06176 WaaY: Lipopolysaccharide core biosynthesis protein (WaaY); InterPro: IPR009330 This family consists of several bacterial lipopolysaccharide core biosynthesis proteins (WaaY or RfaY). The waaY, waaQ, and waaP genes are located in the central operon of the waa (formerly rfa) locus on the chromosome of Escherichia coli. This locus contains genes whose products are involved in the assembly of the core region of the lipopolysaccharide molecule. WaaY is the enzyme that phosphorylates HepII in this system [].; GO: 0009244 lipopolysaccharide core region biosynthetic process
Probab=95.17 E-value=0.031 Score=60.29 Aligned_cols=42 Identities=26% Similarity=0.236 Sum_probs=26.7
Q ss_pred hhhHHHHHHHHhhCCCCCCccccccccCCCCcceEEec----ceEEEEeec
Q 002043 518 GKWLELLEEICNFHKLPTLTAEEKLPVGNGSNPVYLMA----DCVVKIFVE 564 (976)
Q Consensus 518 ~~w~~~~~~~~~~~~l~~~~~~~~~~~~~gs~pv~~v~----~~v~K~~~~ 564 (976)
+++++.+++|+..- ... -+-+- .+.-|-|.++. .+|+|.+-+
T Consensus 19 ~~y~~l~~~i~~~~-~~~---~kv~k-~~~r~~ValIei~~~kyIlK~pr~ 64 (229)
T PF06176_consen 19 EKYLELGEKILDNN-YKI---IKVFK-NTKRNYVALIEIDGKKYILKEPRE 64 (229)
T ss_pred hHHHHHHHHHHhCC-ceE---EEeec-CCCccEEEEEEECCcEEEEeccch
Confidence 46667777777532 111 01223 56678888887 899999884
No 233
>cd05073 PTKc_Hck Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase. Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pa
Probab=95.16 E-value=0.12 Score=55.33 Aligned_cols=16 Identities=25% Similarity=0.605 Sum_probs=14.2
Q ss_pred eEEecCCCCCCeEEcc
Q 002043 814 SWIHSDIMDDNVYMEP 829 (976)
Q Consensus 814 v~iHgDl~~~NILv~~ 829 (976)
-++|+||+|.||++++
T Consensus 122 ~i~H~dl~p~ni~i~~ 137 (260)
T cd05073 122 NYIHRDLRAANILVSA 137 (260)
T ss_pred CccccccCcceEEEcC
Confidence 3699999999999975
No 234
>cd06641 STKc_MST3 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and int
Probab=95.13 E-value=0.14 Score=55.45 Aligned_cols=17 Identities=35% Similarity=0.390 Sum_probs=14.6
Q ss_pred CeEEecCCCCCCeEEcc
Q 002043 813 CSWIHSDIMDDNVYMEP 829 (976)
Q Consensus 813 pv~iHgDl~~~NILv~~ 829 (976)
.-++|+||+|+||+++.
T Consensus 120 ~~i~h~dl~p~Ni~i~~ 136 (277)
T cd06641 120 EKKIHRDIKAANVLLSE 136 (277)
T ss_pred CCeecCCCCHHhEEECC
Confidence 45699999999999965
No 235
>cd05606 STKc_beta_ARK Catalytic domain of the Protein Serine/Threonine Kinase, beta-adrenergic receptor kinase. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, beta-adrenergic receptor kinase (beta-ARK) group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. The beta-ARK group is co
Probab=95.11 E-value=0.16 Score=55.31 Aligned_cols=17 Identities=12% Similarity=0.200 Sum_probs=14.7
Q ss_pred CeEEecCCCCCCeEEcc
Q 002043 813 CSWIHSDIMDDNVYMEP 829 (976)
Q Consensus 813 pv~iHgDl~~~NILv~~ 829 (976)
.-++|+|++|+||+++.
T Consensus 116 ~~i~H~di~p~nili~~ 132 (278)
T cd05606 116 RFVVYRDLKPANILLDE 132 (278)
T ss_pred CCEEcCCCCHHHEEECC
Confidence 34799999999999965
No 236
>cd05605 STKc_GRK4_like Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5,
Probab=95.11 E-value=0.11 Score=56.69 Aligned_cols=16 Identities=13% Similarity=0.387 Sum_probs=14.2
Q ss_pred eEEecCCCCCCeEEcc
Q 002043 814 SWIHSDIMDDNVYMEP 829 (976)
Q Consensus 814 v~iHgDl~~~NILv~~ 829 (976)
-++|+||+|.||++++
T Consensus 122 ~ivH~dlkp~Nil~~~ 137 (285)
T cd05605 122 RIVYRDLKPENILLDD 137 (285)
T ss_pred CcEecCCCHHHEEECC
Confidence 4699999999999975
No 237
>cd05069 PTKc_Yes Catalytic domain of the Protein Tyrosine Kinase, Yes. Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine an
Probab=95.10 E-value=0.18 Score=54.02 Aligned_cols=16 Identities=25% Similarity=0.563 Sum_probs=14.4
Q ss_pred eEEecCCCCCCeEEcc
Q 002043 814 SWIHSDIMDDNVYMEP 829 (976)
Q Consensus 814 v~iHgDl~~~NILv~~ 829 (976)
-++|+||+|+||+++.
T Consensus 122 ~i~H~dl~~~Nill~~ 137 (260)
T cd05069 122 NYIHRDLRAANILVGD 137 (260)
T ss_pred CEeecccCcceEEEcC
Confidence 4799999999999975
No 238
>cd07873 STKc_PCTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may pl
Probab=95.09 E-value=0.12 Score=56.78 Aligned_cols=17 Identities=18% Similarity=0.368 Sum_probs=14.8
Q ss_pred CeEEecCCCCCCeEEcc
Q 002043 813 CSWIHSDIMDDNVYMEP 829 (976)
Q Consensus 813 pv~iHgDl~~~NILv~~ 829 (976)
.-++|+||+|+||+++.
T Consensus 123 ~~i~H~dlkp~Nil~~~ 139 (301)
T cd07873 123 RKVLHRDLKPQNLLINE 139 (301)
T ss_pred CCeeCCCCCHHHEEECC
Confidence 35799999999999975
No 239
>cd06626 STKc_MEKK4 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4
Probab=95.09 E-value=0.12 Score=55.09 Aligned_cols=17 Identities=29% Similarity=0.599 Sum_probs=14.7
Q ss_pred ccEEEEecccCccchhh
Q 002043 672 WPYIITKRCKGKMFAQL 688 (976)
Q Consensus 672 WpYiVm~rl~G~~l~~v 688 (976)
-.|+||++++|.++.++
T Consensus 73 ~~~lv~e~~~~~~L~~~ 89 (264)
T cd06626 73 KVYIFMEYCSGGTLEEL 89 (264)
T ss_pred EEEEEEecCCCCcHHHH
Confidence 47999999999988764
No 240
>cd07870 STKc_PFTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase. Serine/Threonine Kinases (STKs), PFTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-2 is also referred to as ALS2CR7 (amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 7). It may be associated with amyotrophic lateral sclerosis 2 (ALS2), an autosomal recess
Probab=95.07 E-value=0.13 Score=56.02 Aligned_cols=16 Identities=19% Similarity=0.378 Sum_probs=14.3
Q ss_pred eEEecCCCCCCeEEcc
Q 002043 814 SWIHSDIMDDNVYMEP 829 (976)
Q Consensus 814 v~iHgDl~~~NILv~~ 829 (976)
-++|+||+|.||+++.
T Consensus 123 ~i~H~dlkp~Nil~~~ 138 (291)
T cd07870 123 HILHRDLKPQNLLISY 138 (291)
T ss_pred CcccCCCChHHEEEcC
Confidence 4799999999999965
No 241
>PHA03390 pk1 serine/threonine-protein kinase 1; Provisional
Probab=95.03 E-value=0.22 Score=53.96 Aligned_cols=16 Identities=38% Similarity=0.517 Sum_probs=14.3
Q ss_pred eEEecCCCCCCeEEcc
Q 002043 814 SWIHSDIMDDNVYMEP 829 (976)
Q Consensus 814 v~iHgDl~~~NILv~~ 829 (976)
-++|+||+|.||++++
T Consensus 129 ~i~H~dl~p~nil~~~ 144 (267)
T PHA03390 129 NIIHNDIKLENVLYDR 144 (267)
T ss_pred CeeeCCCCHHHEEEeC
Confidence 3799999999999975
No 242
>cd05090 PTKc_Ror1 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly
Probab=95.01 E-value=0.14 Score=55.51 Aligned_cols=17 Identities=18% Similarity=0.452 Sum_probs=14.9
Q ss_pred CeEEecCCCCCCeEEcc
Q 002043 813 CSWIHSDIMDDNVYMEP 829 (976)
Q Consensus 813 pv~iHgDl~~~NILv~~ 829 (976)
.-++|+||+|.||+++.
T Consensus 143 ~~i~H~dlkp~nili~~ 159 (283)
T cd05090 143 HFFVHKDLAARNILIGE 159 (283)
T ss_pred cCeehhccccceEEEcC
Confidence 34899999999999975
No 243
>PHA03209 serine/threonine kinase US3; Provisional
Probab=95.01 E-value=0.13 Score=58.52 Aligned_cols=16 Identities=25% Similarity=0.659 Sum_probs=14.4
Q ss_pred eEEecCCCCCCeEEcc
Q 002043 814 SWIHSDIMDDNVYMEP 829 (976)
Q Consensus 814 v~iHgDl~~~NILv~~ 829 (976)
-++|+||+|+|||++.
T Consensus 177 ~ivHrDlkp~Nill~~ 192 (357)
T PHA03209 177 RIIHRDVKTENIFIND 192 (357)
T ss_pred CeecCCCCHHHEEECC
Confidence 4799999999999975
No 244
>cd05113 PTKc_Btk_Bmx Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome. Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds
Probab=94.99 E-value=0.19 Score=53.91 Aligned_cols=16 Identities=25% Similarity=0.567 Sum_probs=14.3
Q ss_pred eEEecCCCCCCeEEcc
Q 002043 814 SWIHSDIMDDNVYMEP 829 (976)
Q Consensus 814 v~iHgDl~~~NILv~~ 829 (976)
-++|+||+|+||+++.
T Consensus 120 ~i~H~dl~p~nili~~ 135 (256)
T cd05113 120 QFIHRDLAARNCLVDD 135 (256)
T ss_pred CeeccccCcceEEEcC
Confidence 4799999999999965
No 245
>cd05070 PTKc_Fyn_Yrk Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk. Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that r
Probab=94.99 E-value=0.15 Score=54.61 Aligned_cols=16 Identities=25% Similarity=0.580 Sum_probs=14.3
Q ss_pred eEEecCCCCCCeEEcc
Q 002043 814 SWIHSDIMDDNVYMEP 829 (976)
Q Consensus 814 v~iHgDl~~~NILv~~ 829 (976)
-++|+|++|+||+++.
T Consensus 122 ~i~H~di~p~Nili~~ 137 (260)
T cd05070 122 NYIHRDLRSANILVGD 137 (260)
T ss_pred CcccCCCccceEEEeC
Confidence 4799999999999975
No 246
>cd06609 STKc_MST3_like Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN)
Probab=94.97 E-value=0.15 Score=55.00 Aligned_cols=17 Identities=29% Similarity=0.390 Sum_probs=14.6
Q ss_pred CeEEecCCCCCCeEEcc
Q 002043 813 CSWIHSDIMDDNVYMEP 829 (976)
Q Consensus 813 pv~iHgDl~~~NILv~~ 829 (976)
..++|+||+|.||+++.
T Consensus 117 ~~i~h~dl~p~ni~i~~ 133 (274)
T cd06609 117 EGKIHRDIKAANILLSE 133 (274)
T ss_pred CCcccCCCCHHHEEECC
Confidence 34799999999999975
No 247
>cd05035 PTKc_Axl_like Catalytic Domain of Axl-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Axl subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The Axl subfamily consists of Axl, Tyro3 (or Sky), Mer (or Mertk), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl subfamily members are implicated in a variety of cellu
Probab=94.96 E-value=0.21 Score=53.48 Aligned_cols=17 Identities=24% Similarity=0.483 Sum_probs=14.7
Q ss_pred CeEEecCCCCCCeEEcc
Q 002043 813 CSWIHSDIMDDNVYMEP 829 (976)
Q Consensus 813 pv~iHgDl~~~NILv~~ 829 (976)
.-++|+||+|+||+++.
T Consensus 132 ~~i~H~dlkp~Nil~~~ 148 (273)
T cd05035 132 RNFIHRDLAARNCMLRE 148 (273)
T ss_pred CCeeccccchheEEECC
Confidence 35799999999999965
No 248
>cd05148 PTKc_Srm_Brk Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk. Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase dom
Probab=94.96 E-value=0.17 Score=53.99 Aligned_cols=16 Identities=25% Similarity=0.434 Sum_probs=14.3
Q ss_pred eEEecCCCCCCeEEcc
Q 002043 814 SWIHSDIMDDNVYMEP 829 (976)
Q Consensus 814 v~iHgDl~~~NILv~~ 829 (976)
-++|+||+|.||+++.
T Consensus 124 ~i~h~dl~~~nilv~~ 139 (261)
T cd05148 124 NSIHRDLAARNILVGE 139 (261)
T ss_pred CeeccccCcceEEEcC
Confidence 3799999999999975
No 249
>cd05072 PTKc_Lyn Catalytic domain of the Protein Tyrosine Kinase, Lyn. Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth fa
Probab=94.94 E-value=0.16 Score=54.29 Aligned_cols=16 Identities=31% Similarity=0.594 Sum_probs=14.3
Q ss_pred eEEecCCCCCCeEEcc
Q 002043 814 SWIHSDIMDDNVYMEP 829 (976)
Q Consensus 814 v~iHgDl~~~NILv~~ 829 (976)
-++|+||+|.||++++
T Consensus 123 ~i~H~dl~p~nili~~ 138 (261)
T cd05072 123 NYIHRDLRAANVLVSE 138 (261)
T ss_pred CeeccccchhhEEecC
Confidence 4699999999999975
No 250
>cd06628 STKc_MAPKKK_Byr2_like Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate
Probab=94.94 E-value=0.14 Score=54.75 Aligned_cols=16 Identities=31% Similarity=0.538 Sum_probs=14.1
Q ss_pred eEEecCCCCCCeEEcc
Q 002043 814 SWIHSDIMDDNVYMEP 829 (976)
Q Consensus 814 v~iHgDl~~~NILv~~ 829 (976)
-++|+||+|.||++++
T Consensus 126 ~ivH~di~p~nil~~~ 141 (267)
T cd06628 126 GIIHRDIKGANILVDN 141 (267)
T ss_pred CcccccCCHHHEEEcC
Confidence 3699999999999965
No 251
>cd07853 STKc_NLK Catalytic domain of the Serine/Threonine Kinase, Nemo-Like Kinase. Serine/Threonine Kinases (STKs), Nemo-Like Kinase (NLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mitogen-activated protein kinases (MAPKs) are important mediators of cellular responses to extracellular signals. NLK is an atypical MAPK that is not regulated by a MAPK kinase. It functions downstream of the MAPK kinase kinase Tak1, which also plays a role in activating the JNK and p38 MAPKs. The Tak1/NLK pathways are regulated by Wnts, a family of secreted proteins that is critical in the control of asymmetric division and cell polarity. NLK can phosphorylate transcription
Probab=94.93 E-value=0.12 Score=59.00 Aligned_cols=16 Identities=25% Similarity=0.468 Sum_probs=14.3
Q ss_pred eEEecCCCCCCeEEcc
Q 002043 814 SWIHSDIMDDNVYMEP 829 (976)
Q Consensus 814 v~iHgDl~~~NILv~~ 829 (976)
-++|+||+|+|||++.
T Consensus 123 ~ivH~dlkp~Nili~~ 138 (372)
T cd07853 123 GILHRDIKPGNLLVNS 138 (372)
T ss_pred CeeCCCCChHHEEECC
Confidence 4699999999999975
No 252
>cd07846 STKc_CDKL2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKI
Probab=94.92 E-value=0.1 Score=56.45 Aligned_cols=16 Identities=31% Similarity=0.557 Sum_probs=14.1
Q ss_pred eEEecCCCCCCeEEcc
Q 002043 814 SWIHSDIMDDNVYMEP 829 (976)
Q Consensus 814 v~iHgDl~~~NILv~~ 829 (976)
.++|+||+|.||++++
T Consensus 120 ~i~h~~l~p~ni~~~~ 135 (286)
T cd07846 120 NIIHRDIKPENILVSQ 135 (286)
T ss_pred CccccCCCHHHEEECC
Confidence 4689999999999975
No 253
>cd06656 STKc_PAK3 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=94.92 E-value=0.13 Score=56.72 Aligned_cols=16 Identities=38% Similarity=0.551 Sum_probs=14.0
Q ss_pred eEEecCCCCCCeEEcc
Q 002043 814 SWIHSDIMDDNVYMEP 829 (976)
Q Consensus 814 v~iHgDl~~~NILv~~ 829 (976)
-++|+||+|+||+++.
T Consensus 135 ~i~H~dL~p~Nili~~ 150 (297)
T cd06656 135 QVIHRDIKSDNILLGM 150 (297)
T ss_pred CcccCCCCHHHEEECC
Confidence 3689999999999965
No 254
>cd06625 STKc_MEKK3_like Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades t
Probab=94.91 E-value=0.24 Score=52.78 Aligned_cols=17 Identities=12% Similarity=-0.042 Sum_probs=14.6
Q ss_pred ccEEEEecccCccchhh
Q 002043 672 WPYIITKRCKGKMFAQL 688 (976)
Q Consensus 672 WpYiVm~rl~G~~l~~v 688 (976)
.+|+||++++|.++.+.
T Consensus 78 ~~~~v~e~~~~~~l~~~ 94 (263)
T cd06625 78 TLSIFMEYMPGGSVKDQ 94 (263)
T ss_pred eEEEEEEECCCCcHHHH
Confidence 68999999999987664
No 255
>cd08218 STKc_Nek1 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 1. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 1 (Nek1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek1 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek1 is associated with centrosomes throughout the cell cycle. It is involved in the formation of primary cilium and in the maintenance of centrosomes. It cycles through the nucleus and may be capable of relaying signals between the cilium and the nucleus. Nek1 is implicated in the development of polycysti
Probab=94.91 E-value=0.16 Score=53.92 Aligned_cols=16 Identities=25% Similarity=0.619 Sum_probs=14.4
Q ss_pred eEEecCCCCCCeEEcc
Q 002043 814 SWIHSDIMDDNVYMEP 829 (976)
Q Consensus 814 v~iHgDl~~~NILv~~ 829 (976)
-++|+||.|.||+++.
T Consensus 121 ~i~h~~l~~~nil~~~ 136 (256)
T cd08218 121 KILHRDIKSQNIFLTK 136 (256)
T ss_pred CEecCCCCHHHEEEcC
Confidence 4799999999999975
No 256
>cd05062 PTKc_IGF-1R Catalytic domain of the Protein Tyrosine Kinase, Insulin-like Growth Factor-1 Receptor. Protein Tyrosine Kinase (PTK) family; Insulin-like Growth Factor-1 Receptor (IGF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. IGF-1R is a receptor tyr kinases (RTK) that is composed of two alphabeta heterodimers. Binding of the ligand (IGF-1 or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, which stimulates downstream kinase activities and biological function. IGF-1R signaling is important in the differentiation, growth, and survival of normal cells. In cancer cells, wh
Probab=94.87 E-value=0.17 Score=54.80 Aligned_cols=16 Identities=19% Similarity=0.490 Sum_probs=14.4
Q ss_pred eEEecCCCCCCeEEcc
Q 002043 814 SWIHSDIMDDNVYMEP 829 (976)
Q Consensus 814 v~iHgDl~~~NILv~~ 829 (976)
-++|+||+|.||++++
T Consensus 139 ~~vH~dlkp~Nil~~~ 154 (277)
T cd05062 139 KFVHRDLAARNCMVAE 154 (277)
T ss_pred CcccCCcchheEEEcC
Confidence 4799999999999975
No 257
>cd05100 PTKc_FGFR3 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 3. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 3 (FGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR3 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=94.87 E-value=0.15 Score=57.11 Aligned_cols=17 Identities=29% Similarity=0.411 Sum_probs=14.7
Q ss_pred CeEEecCCCCCCeEEcc
Q 002043 813 CSWIHSDIMDDNVYMEP 829 (976)
Q Consensus 813 pv~iHgDl~~~NILv~~ 829 (976)
.-++|+||+|.||++++
T Consensus 153 ~givH~dlkp~Nill~~ 169 (334)
T cd05100 153 QKCIHRDLAARNVLVTE 169 (334)
T ss_pred CCeeccccccceEEEcC
Confidence 34799999999999975
No 258
>cd05633 STKc_GRK3 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 3. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK3 (also known as beta-adrenergic receptor kinase 2) is wi
Probab=94.85 E-value=0.16 Score=55.50 Aligned_cols=16 Identities=13% Similarity=0.258 Sum_probs=14.0
Q ss_pred eEEecCCCCCCeEEcc
Q 002043 814 SWIHSDIMDDNVYMEP 829 (976)
Q Consensus 814 v~iHgDl~~~NILv~~ 829 (976)
-++|+||+|+||+++.
T Consensus 117 ~ivH~dikp~Nil~~~ 132 (279)
T cd05633 117 FVVYRDLKPANILLDE 132 (279)
T ss_pred CcCCCCCCHHHEEECC
Confidence 3689999999999975
No 259
>cd06646 STKc_MAP4K5 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 5 (MAPKKKK5 or MAP4K5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated
Probab=94.85 E-value=0.18 Score=54.04 Aligned_cols=16 Identities=25% Similarity=0.443 Sum_probs=14.0
Q ss_pred eEEecCCCCCCeEEcc
Q 002043 814 SWIHSDIMDDNVYMEP 829 (976)
Q Consensus 814 v~iHgDl~~~NILv~~ 829 (976)
-++|+|+.|+||+++.
T Consensus 126 ~i~H~dl~p~nill~~ 141 (267)
T cd06646 126 GKMHRDIKGANILLTD 141 (267)
T ss_pred CccccCCCHHHEEECC
Confidence 4699999999999965
No 260
>cd07835 STKc_CDK1_like Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyc
Probab=94.85 E-value=0.18 Score=54.53 Aligned_cols=17 Identities=18% Similarity=0.407 Sum_probs=14.8
Q ss_pred CeEEecCCCCCCeEEcc
Q 002043 813 CSWIHSDIMDDNVYMEP 829 (976)
Q Consensus 813 pv~iHgDl~~~NILv~~ 829 (976)
..++|+|++|.||+++.
T Consensus 118 ~~~~H~dl~p~nil~~~ 134 (283)
T cd07835 118 HRVLHRDLKPQNLLIDR 134 (283)
T ss_pred CCeeCCCCCHHHEEEcC
Confidence 35799999999999975
No 261
>cd08224 STKc_Nek6_Nek7 Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may a
Probab=94.84 E-value=0.2 Score=53.39 Aligned_cols=16 Identities=31% Similarity=0.576 Sum_probs=14.3
Q ss_pred eEEecCCCCCCeEEcc
Q 002043 814 SWIHSDIMDDNVYMEP 829 (976)
Q Consensus 814 v~iHgDl~~~NILv~~ 829 (976)
-++|+||+|+||+++.
T Consensus 126 ~i~h~dl~p~nil~~~ 141 (267)
T cd08224 126 RIMHRDIKPANVFITA 141 (267)
T ss_pred CEecCCcChhhEEECC
Confidence 4799999999999975
No 262
>PHA03211 serine/threonine kinase US3; Provisional
Probab=94.83 E-value=0.14 Score=60.95 Aligned_cols=16 Identities=38% Similarity=0.553 Sum_probs=14.3
Q ss_pred eEEecCCCCCCeEEcc
Q 002043 814 SWIHSDIMDDNVYMEP 829 (976)
Q Consensus 814 v~iHgDl~~~NILv~~ 829 (976)
-++|+||+|+|||++.
T Consensus 280 gIvHrDLKP~NILl~~ 295 (461)
T PHA03211 280 GIIHRDIKTENVLVNG 295 (461)
T ss_pred CEEECcCCHHHEEECC
Confidence 4799999999999975
No 263
>cd05050 PTKc_Musk Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase. Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates M
Probab=94.81 E-value=0.16 Score=55.27 Aligned_cols=17 Identities=18% Similarity=0.413 Sum_probs=15.1
Q ss_pred CeEEecCCCCCCeEEcc
Q 002043 813 CSWIHSDIMDDNVYMEP 829 (976)
Q Consensus 813 pv~iHgDl~~~NILv~~ 829 (976)
..++|+||+|.||+++.
T Consensus 149 ~~i~H~dl~p~nil~~~ 165 (288)
T cd05050 149 RKFVHRDLATRNCLVGE 165 (288)
T ss_pred CCeecccccHhheEecC
Confidence 46899999999999965
No 264
>cd05060 PTKc_Syk_like Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, mi
Probab=94.80 E-value=0.21 Score=53.30 Aligned_cols=16 Identities=25% Similarity=0.536 Sum_probs=14.2
Q ss_pred eEEecCCCCCCeEEcc
Q 002043 814 SWIHSDIMDDNVYMEP 829 (976)
Q Consensus 814 v~iHgDl~~~NILv~~ 829 (976)
-++|+||+|.||+++.
T Consensus 115 ~i~H~di~p~nili~~ 130 (257)
T cd05060 115 HFVHRDLAARNVLLVN 130 (257)
T ss_pred CeeccCcccceEEEcC
Confidence 3799999999999975
No 265
>PTZ00284 protein kinase; Provisional
Probab=94.78 E-value=0.16 Score=60.22 Aligned_cols=17 Identities=29% Similarity=0.600 Sum_probs=14.8
Q ss_pred CeEEecCCCCCCeEEcc
Q 002043 813 CSWIHSDIMDDNVYMEP 829 (976)
Q Consensus 813 pv~iHgDl~~~NILv~~ 829 (976)
.-+||+||+|+|||++.
T Consensus 251 ~gIiHrDlKP~NILl~~ 267 (467)
T PTZ00284 251 LHLMHTDLKPENILMET 267 (467)
T ss_pred CCeecCCCCHHHEEEec
Confidence 34799999999999975
No 266
>cd05632 STKc_GRK5 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK5 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK5 is widely expressed in many tissues. It associates with
Probab=94.76 E-value=0.17 Score=55.28 Aligned_cols=16 Identities=13% Similarity=0.374 Sum_probs=14.2
Q ss_pred eEEecCCCCCCeEEcc
Q 002043 814 SWIHSDIMDDNVYMEP 829 (976)
Q Consensus 814 v~iHgDl~~~NILv~~ 829 (976)
-++|+|++|+||+++.
T Consensus 122 ~iiH~dikp~Nili~~ 137 (285)
T cd05632 122 NTVYRDLKPENILLDD 137 (285)
T ss_pred CeeecCCCHHHEEECC
Confidence 4799999999999975
No 267
>cd06638 STKc_myosinIIIA Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIA myosin. Serine/threonine kinases (STKs), class IIIA myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. In photoreceptor cells, they may also function as cargo carriers during light-dependent translocation of proteins such as transducin and arrestin. Class IIIA myosin is highly expressed in retina and in inner ear
Probab=94.74 E-value=0.22 Score=53.96 Aligned_cols=17 Identities=18% Similarity=0.485 Sum_probs=14.7
Q ss_pred ccEEEEecccCccchhh
Q 002043 672 WPYIITKRCKGKMFAQL 688 (976)
Q Consensus 672 WpYiVm~rl~G~~l~~v 688 (976)
-+|+||++++|.+|.+.
T Consensus 94 ~~~lv~e~~~~~~L~~~ 110 (286)
T cd06638 94 QLWLVLELCNGGSVTDL 110 (286)
T ss_pred eEEEEEeecCCCCHHHH
Confidence 58999999999988763
No 268
>cd07859 STKc_TDY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TDY Mitogen-Activated Protein Kinases from Plants. Serine/Threonine Kinases (STKs), Plant TDY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TDY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. Oryza sativa contains at least 17 MAPKs. There are two subtypes of plant MAPKs based on the conserved phos
Probab=94.73 E-value=0.17 Score=56.37 Aligned_cols=16 Identities=19% Similarity=0.385 Sum_probs=14.2
Q ss_pred eEEecCCCCCCeEEcc
Q 002043 814 SWIHSDIMDDNVYMEP 829 (976)
Q Consensus 814 v~iHgDl~~~NILv~~ 829 (976)
-++|+||+|+|||++.
T Consensus 123 ~ivH~dlkp~NIll~~ 138 (338)
T cd07859 123 NVFHRDLKPKNILANA 138 (338)
T ss_pred CeecCCCCHHHeEECC
Confidence 4799999999999975
No 269
>cd05042 PTKc_Aatyk Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase (Aatyk) subfamily; catalytic (c) domain. The Aatyk subfamily is also referred to as the lemur tyrosine kinase (Lmtk) subfamily. It consists of Aatyk1 (Lmtk1), Aatyk2 (Lmtk2, Brek), Aatyk3 (Lmtk3), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk proteins are mostly receptor tyr kinases (RTKs) containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 does not contain a transmembrane segment and is a cytoplasmic (or nonreceptor) kinase. Aatyk proteins are classified as tyr kina
Probab=94.72 E-value=0.21 Score=53.72 Aligned_cols=16 Identities=31% Similarity=0.499 Sum_probs=14.3
Q ss_pred eEEecCCCCCCeEEcc
Q 002043 814 SWIHSDIMDDNVYMEP 829 (976)
Q Consensus 814 v~iHgDl~~~NILv~~ 829 (976)
-++|+||+|.||+++.
T Consensus 120 ~ivH~dlkp~Nill~~ 135 (269)
T cd05042 120 DFIHSDLALRNCQLTA 135 (269)
T ss_pred CEecccccHhheEecC
Confidence 4799999999999975
No 270
>cd05081 PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3. Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as th
Probab=94.70 E-value=0.25 Score=53.48 Aligned_cols=16 Identities=25% Similarity=0.663 Sum_probs=14.2
Q ss_pred eEEecCCCCCCeEEcc
Q 002043 814 SWIHSDIMDDNVYMEP 829 (976)
Q Consensus 814 v~iHgDl~~~NILv~~ 829 (976)
-++|+||+|+||++++
T Consensus 128 ~i~H~dlkp~nili~~ 143 (284)
T cd05081 128 RYVHRDLATRNILVES 143 (284)
T ss_pred CceeccCCHhhEEECC
Confidence 3699999999999975
No 271
>cd05108 PTKc_EGFR Catalytic domain of the Protein Tyrosine Kinase, Epidermal Growth Factor Receptor. Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EGFR (HER1, ErbB1) is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphor
Probab=94.69 E-value=0.2 Score=55.68 Aligned_cols=16 Identities=25% Similarity=0.507 Sum_probs=14.2
Q ss_pred eEEecCCCCCCeEEcc
Q 002043 814 SWIHSDIMDDNVYMEP 829 (976)
Q Consensus 814 v~iHgDl~~~NILv~~ 829 (976)
-++|+||+|+||+++.
T Consensus 129 ~iiH~dlkp~Nill~~ 144 (316)
T cd05108 129 RLVHRDLAARNVLVKT 144 (316)
T ss_pred CeeccccchhheEecC
Confidence 3799999999999965
No 272
>cd07867 STKc_CDC2L6 Catalytic domain of Serine/Threonine Kinase, Cell Division Cycle 2-like 6. Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 6 (CDC2L6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L6 is also called CDK8-like and was previously referred to as CDK11. However, this is a confusing nomenclature as CDC2L6 is distinct from CDC2L1, which is represented by the two protein products from its gene, called CDK11(p110) and CDK11(p58), as well as
Probab=94.66 E-value=0.24 Score=54.54 Aligned_cols=17 Identities=18% Similarity=0.215 Sum_probs=14.6
Q ss_pred CeEEecCCCCCCeEEcc
Q 002043 813 CSWIHSDIMDDNVYMEP 829 (976)
Q Consensus 813 pv~iHgDl~~~NILv~~ 829 (976)
.-++|+||+|+||++..
T Consensus 127 ~~ivH~Dlkp~Nil~~~ 143 (317)
T cd07867 127 NWVLHRDLKPANILVMG 143 (317)
T ss_pred CCEEcCCCCHHHEEEcc
Confidence 34899999999999964
No 273
>cd05109 PTKc_HER2 Catalytic domain of the Protein Tyrosine Kinase, HER2. Protein Tyrosine Kinase (PTK) family; HER2 (ErbB2, HER2/neu); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER2 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve
Probab=94.64 E-value=0.26 Score=53.35 Aligned_cols=16 Identities=25% Similarity=0.513 Sum_probs=14.2
Q ss_pred eEEecCCCCCCeEEcc
Q 002043 814 SWIHSDIMDDNVYMEP 829 (976)
Q Consensus 814 v~iHgDl~~~NILv~~ 829 (976)
-++|+||+|+||+++.
T Consensus 129 ~iiH~dlkp~Nil~~~ 144 (279)
T cd05109 129 RLVHRDLAARNVLVKS 144 (279)
T ss_pred CeeccccccceEEEcC
Confidence 4799999999999965
No 274
>cd05630 STKc_GRK6 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as
Probab=94.62 E-value=0.22 Score=54.55 Aligned_cols=17 Identities=12% Similarity=0.305 Sum_probs=14.9
Q ss_pred CeEEecCCCCCCeEEcc
Q 002043 813 CSWIHSDIMDDNVYMEP 829 (976)
Q Consensus 813 pv~iHgDl~~~NILv~~ 829 (976)
.-++|+||+|+||+++.
T Consensus 121 ~~iiH~dikp~Nil~~~ 137 (285)
T cd05630 121 ERIVYRDLKPENILLDD 137 (285)
T ss_pred CCEEeCCCCHHHEEECC
Confidence 45799999999999975
No 275
>cd05045 PTKc_RET Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein. Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leadi
Probab=94.60 E-value=0.2 Score=54.68 Aligned_cols=17 Identities=24% Similarity=0.430 Sum_probs=14.9
Q ss_pred CeEEecCCCCCCeEEcc
Q 002043 813 CSWIHSDIMDDNVYMEP 829 (976)
Q Consensus 813 pv~iHgDl~~~NILv~~ 829 (976)
.-++|+||+|.||+++.
T Consensus 146 ~~ivH~dikp~nill~~ 162 (290)
T cd05045 146 MKLVHRDLAARNVLVAE 162 (290)
T ss_pred CCeehhhhhhheEEEcC
Confidence 45799999999999965
No 276
>KOG0583 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=94.59 E-value=0.24 Score=57.48 Aligned_cols=35 Identities=17% Similarity=0.307 Sum_probs=27.6
Q ss_pred CCeEEecCCCCCCeEEccCCcccCCCCCCCCCCCccCCCCCCCCccCcCccceeeEEEeCCCCCCCC
Q 002043 812 PCSWIHSDIMDDNVYMEPCCASSRSNGNAADTGPMVNGSINGYDEFGEAKSWHCSHIIDFSNLSIGD 878 (976)
Q Consensus 812 ~pv~iHgDl~~~NILv~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~~~~~~w~~sGIIDFgd~~iGD 878 (976)
..-.+|+||+++|||++... + ++ =|+|||.+.+.+
T Consensus 138 ~~gi~HRDLK~ENilld~~~------------------------~-------~~-Kl~DFG~s~~~~ 172 (370)
T KOG0583|consen 138 SRGIVHRDLKPENILLDGNE------------------------G-------NL-KLSDFGLSAISP 172 (370)
T ss_pred hCCEeeCCCCHHHEEecCCC------------------------C-------CE-EEeccccccccC
Confidence 45679999999999997631 1 33 799999999885
No 277
>cd06654 STKc_PAK1 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=94.59 E-value=0.29 Score=53.85 Aligned_cols=17 Identities=6% Similarity=0.198 Sum_probs=14.3
Q ss_pred ccEEEEecccCccchhh
Q 002043 672 WPYIITKRCKGKMFAQL 688 (976)
Q Consensus 672 WpYiVm~rl~G~~l~~v 688 (976)
-.|+||++++|.+|.+.
T Consensus 91 ~~~lv~e~~~~~~L~~~ 107 (296)
T cd06654 91 ELWVVMEYLAGGSLTDV 107 (296)
T ss_pred EEEEeecccCCCCHHHH
Confidence 47999999999888764
No 278
>cd05054 PTKc_VEGFR Catalytic domain of the Protein Tyrosine Kinases, Vascular Endothelial Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor (VEGFR) subfamily; catalytic (c) domain. The VEGFR subfamily consists of VEGFR1 (Flt1), VEGFR2 (Flk1), VEGFR3 (Flt4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to recepto
Probab=94.56 E-value=0.2 Score=56.64 Aligned_cols=16 Identities=25% Similarity=0.511 Sum_probs=14.4
Q ss_pred eEEecCCCCCCeEEcc
Q 002043 814 SWIHSDIMDDNVYMEP 829 (976)
Q Consensus 814 v~iHgDl~~~NILv~~ 829 (976)
-++|+||+|.|||++.
T Consensus 193 ~ivHrDikp~Nill~~ 208 (337)
T cd05054 193 KCIHRDLAARNILLSE 208 (337)
T ss_pred CeecCCCCcceEEEeC
Confidence 4799999999999975
No 279
>PTZ00036 glycogen synthase kinase; Provisional
Probab=94.51 E-value=0.23 Score=58.67 Aligned_cols=17 Identities=24% Similarity=0.432 Sum_probs=14.9
Q ss_pred CeEEecCCCCCCeEEcc
Q 002043 813 CSWIHSDIMDDNVYMEP 829 (976)
Q Consensus 813 pv~iHgDl~~~NILv~~ 829 (976)
.-++|+||+|+|||++.
T Consensus 189 ~~IiHrDLKp~NILl~~ 205 (440)
T PTZ00036 189 KFICHRDLKPQNLLIDP 205 (440)
T ss_pred CCEecCCcCHHHEEEcC
Confidence 35899999999999975
No 280
>cd05123 STKc_AGC Catalytic domain of AGC family Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the
Probab=94.49 E-value=0.24 Score=52.28 Aligned_cols=17 Identities=18% Similarity=0.384 Sum_probs=14.7
Q ss_pred CeEEecCCCCCCeEEcc
Q 002043 813 CSWIHSDIMDDNVYMEP 829 (976)
Q Consensus 813 pv~iHgDl~~~NILv~~ 829 (976)
.-++|+|++|.||+++.
T Consensus 112 ~~~~H~~l~p~ni~~~~ 128 (250)
T cd05123 112 LGIIYRDLKPENILLDA 128 (250)
T ss_pred CCceecCCCcceEEEcC
Confidence 44699999999999975
No 281
>cd05089 PTKc_Tie1 Catalytic domain of the Protein Tyrosine Kinase, Tie1. Protein Tyrosine Kinase (PTK) family; Tie1; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie1 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. No specific ligand has been identified for Tie1, although the angiopoietin, Ang-1, binds to Tie1 through integrins at high concentrations.
Probab=94.47 E-value=0.23 Score=54.52 Aligned_cols=17 Identities=29% Similarity=0.481 Sum_probs=14.8
Q ss_pred CeEEecCCCCCCeEEcc
Q 002043 813 CSWIHSDIMDDNVYMEP 829 (976)
Q Consensus 813 pv~iHgDl~~~NILv~~ 829 (976)
.-++|+||+|.||+++.
T Consensus 138 ~~ivH~dlkp~Nill~~ 154 (297)
T cd05089 138 KQFIHRDLAARNVLVGE 154 (297)
T ss_pred CCcccCcCCcceEEECC
Confidence 35799999999999965
No 282
>cd07845 STKc_CDK10 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10. Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing
Probab=94.47 E-value=0.25 Score=54.44 Aligned_cols=16 Identities=25% Similarity=0.345 Sum_probs=14.2
Q ss_pred eEEecCCCCCCeEEcc
Q 002043 814 SWIHSDIMDDNVYMEP 829 (976)
Q Consensus 814 v~iHgDl~~~NILv~~ 829 (976)
-++|+||+|+||+++.
T Consensus 128 ~i~H~dl~p~nil~~~ 143 (309)
T cd07845 128 FIIHRDLKVSNLLLTD 143 (309)
T ss_pred CeecCCCCHHHEEECC
Confidence 3799999999999975
No 283
>cd05112 PTKc_Itk Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase. Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activ
Probab=94.46 E-value=0.28 Score=52.15 Aligned_cols=16 Identities=25% Similarity=0.385 Sum_probs=14.3
Q ss_pred eEEecCCCCCCeEEcc
Q 002043 814 SWIHSDIMDDNVYMEP 829 (976)
Q Consensus 814 v~iHgDl~~~NILv~~ 829 (976)
-++|+||+|.||+++.
T Consensus 120 ~i~h~dl~p~ni~i~~ 135 (256)
T cd05112 120 NVIHRDLAARNCLVGE 135 (256)
T ss_pred CccccccccceEEEcC
Confidence 4799999999999965
No 284
>cd05063 PTKc_EphR_A2 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored
Probab=94.46 E-value=0.25 Score=53.00 Aligned_cols=16 Identities=19% Similarity=0.623 Sum_probs=14.3
Q ss_pred eEEecCCCCCCeEEcc
Q 002043 814 SWIHSDIMDDNVYMEP 829 (976)
Q Consensus 814 v~iHgDl~~~NILv~~ 829 (976)
-++|+|++|.||+++.
T Consensus 127 ~i~H~dlkp~Nili~~ 142 (268)
T cd05063 127 NYVHRDLAARNILVNS 142 (268)
T ss_pred CeeccccchhhEEEcC
Confidence 4799999999999975
No 285
>cd06636 STKc_MAP4K4_6 Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Ea
Probab=94.45 E-value=0.2 Score=54.21 Aligned_cols=17 Identities=35% Similarity=0.466 Sum_probs=14.8
Q ss_pred CeEEecCCCCCCeEEcc
Q 002043 813 CSWIHSDIMDDNVYMEP 829 (976)
Q Consensus 813 pv~iHgDl~~~NILv~~ 829 (976)
.-++|+|+++.||+++.
T Consensus 140 ~~ivH~dl~~~nili~~ 156 (282)
T cd06636 140 HKVIHRDIKGQNVLLTE 156 (282)
T ss_pred CCcccCCCCHHHEEECC
Confidence 35799999999999975
No 286
>cd07868 STKc_CDK8 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 8. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK8 can act as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA p
Probab=94.42 E-value=0.4 Score=53.02 Aligned_cols=17 Identities=18% Similarity=0.215 Sum_probs=14.6
Q ss_pred CeEEecCCCCCCeEEcc
Q 002043 813 CSWIHSDIMDDNVYMEP 829 (976)
Q Consensus 813 pv~iHgDl~~~NILv~~ 829 (976)
.-++|+||+|+|||+..
T Consensus 127 ~~ivHrDlkp~Nil~~~ 143 (317)
T cd07868 127 NWVLHRDLKPANILVMG 143 (317)
T ss_pred CCEEcCCCCHHHEEEec
Confidence 34899999999999964
No 287
>cd05581 STKc_PDK1 Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1. Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to auto
Probab=94.40 E-value=0.15 Score=54.57 Aligned_cols=16 Identities=25% Similarity=0.590 Sum_probs=14.2
Q ss_pred eEEecCCCCCCeEEcc
Q 002043 814 SWIHSDIMDDNVYMEP 829 (976)
Q Consensus 814 v~iHgDl~~~NILv~~ 829 (976)
-++|+|++|+||++..
T Consensus 122 ~~~H~dl~~~ni~i~~ 137 (280)
T cd05581 122 GIIHRDLKPENILLDK 137 (280)
T ss_pred CeeecCCCHHHeEECC
Confidence 4799999999999965
No 288
>cd05040 PTKc_Ack_like Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase. Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with and
Probab=94.39 E-value=0.3 Score=51.92 Aligned_cols=16 Identities=25% Similarity=0.615 Sum_probs=14.3
Q ss_pred eEEecCCCCCCeEEcc
Q 002043 814 SWIHSDIMDDNVYMEP 829 (976)
Q Consensus 814 v~iHgDl~~~NILv~~ 829 (976)
-++|+||+|.||++++
T Consensus 117 ~i~H~di~p~nil~~~ 132 (257)
T cd05040 117 RFIHRDLAARNILLAS 132 (257)
T ss_pred CccccccCcccEEEec
Confidence 4699999999999976
No 289
>cd05056 PTKc_FAK Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase. Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions
Probab=94.38 E-value=0.27 Score=52.80 Aligned_cols=17 Identities=29% Similarity=0.517 Sum_probs=14.8
Q ss_pred CeEEecCCCCCCeEEcc
Q 002043 813 CSWIHSDIMDDNVYMEP 829 (976)
Q Consensus 813 pv~iHgDl~~~NILv~~ 829 (976)
.-++|+||+|.||+++.
T Consensus 126 ~~~~H~dl~p~nili~~ 142 (270)
T cd05056 126 KRFVHRDIAARNVLVSS 142 (270)
T ss_pred CCeeccccChheEEEec
Confidence 45799999999999965
No 290
>PF00190 Cupin_1: Cupin; InterPro: IPR006045 This family represents the conserved barrel domain of the 'cupin' superfamily ('cupa' is the Latin term for a small barrel). This family contains 11S and 7S plant seed storage proteins, and germins. Plant seed storage proteins provide the major nitrogen source for the developing plant. ; GO: 0045735 nutrient reservoir activity; PDB: 2E9Q_A 2EVX_A 1OD5_A 1UCX_A 1UD1_C 1FXZ_C 3KGL_C 3KSC_D 1UIJ_F 1IPK_B ....
Probab=94.37 E-value=0.089 Score=52.60 Aligned_cols=77 Identities=18% Similarity=0.211 Sum_probs=52.2
Q ss_pred cCCCCCcccccCCCCcccEEEEEEEEEEEEeCCCCCCCcceeeecCCCCCccccCCcchhhhhhhCCCCCCCCCCEEE--
Q 002043 258 PQRSGASWHVDPALTSAWNTLLCGRKRWALYPPGRVPLGVTVHVNEDDGDVNIETPSSLEWWLDFYPLLADDDKPIEC-- 335 (976)
Q Consensus 258 p~gSgT~lH~Dp~~t~awn~qI~GrKrW~LfPP~~~p~~v~~~~~~~~s~vd~~~Pdsl~W~l~~yP~l~~~~~~~e~-- 335 (976)
.+|+...+|+. . .+.+..+++|+=+..++.|+..- +. .+...-
T Consensus 42 ~pg~~~~Ph~h-~-a~~i~~V~~G~~~~~~v~~~~~~-----------~~----------------------~~~~~~~v 86 (144)
T PF00190_consen 42 EPGGLRAPHYH-N-ADEIVYVIEGRGRVGVVGPGGPQ-----------EE----------------------FRDFSQKV 86 (144)
T ss_dssp ETTEEEEEEEE-S-SEEEEEEEESEEEEEEEETTCSS-----------SE----------------------EEEEEEEE
T ss_pred hcCCccceeEe-e-eeEEeeeeccceEEEEEecCCcc-----------cc----------------------ceeeecee
Confidence 35777888888 3 46799999999998777665310 00 011222
Q ss_pred EEcCCCEEEeCCCCceeeEec--CCcEEEeecccCC
Q 002043 336 TQLPGETIVVPSGWWHCILNL--ETTIAVTQNFVDS 369 (976)
Q Consensus 336 vL~PGDvLfVP~GWWH~V~NL--d~SISVt~NFv~~ 369 (976)
.+++||+++||+|+.|.+.|. ++.+.+.....+.
T Consensus 87 ~l~~Gdv~~vP~G~~h~~~n~~~~~~~~~~~f~~~~ 122 (144)
T PF00190_consen 87 RLKAGDVFVVPAGHPHWIINDGDDEALVLIIFDTNN 122 (144)
T ss_dssp EEETTEEEEE-TT-EEEEEECSSSSEEEEEEEEESS
T ss_pred eeecccceeeccceeEEEEcCCCCCCEEEEEEECCC
Confidence 599999999999999999999 4666666544443
No 291
>cd05051 PTKc_DDR Catalytic domain of the Protein Tyrosine Kinases, Discoidin Domain Receptors. Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR) subfamily; catalytic (c) domain. The DDR subfamily consists of homologs of mammalian DDR1, DDR2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR subfamily members are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linke
Probab=94.33 E-value=0.26 Score=53.65 Aligned_cols=16 Identities=19% Similarity=0.499 Sum_probs=14.3
Q ss_pred eEEecCCCCCCeEEcc
Q 002043 814 SWIHSDIMDDNVYMEP 829 (976)
Q Consensus 814 v~iHgDl~~~NILv~~ 829 (976)
.++|+||+|+||+++.
T Consensus 150 ~i~H~dlkp~Nili~~ 165 (296)
T cd05051 150 NFVHRDLATRNCLVGK 165 (296)
T ss_pred CccccccchhceeecC
Confidence 4799999999999975
No 292
>PHA03212 serine/threonine kinase US3; Provisional
Probab=94.32 E-value=0.27 Score=57.09 Aligned_cols=16 Identities=31% Similarity=0.663 Sum_probs=14.3
Q ss_pred eEEecCCCCCCeEEcc
Q 002043 814 SWIHSDIMDDNVYMEP 829 (976)
Q Consensus 814 v~iHgDl~~~NILv~~ 829 (976)
-++|+||+|+|||++.
T Consensus 202 ~IvHrDiKP~NIll~~ 217 (391)
T PHA03212 202 RIIHRDIKAENIFINH 217 (391)
T ss_pred CcccCCCChHhEEEcC
Confidence 4699999999999975
No 293
>PF06881 Elongin_A: RNA polymerase II transcription factor SIII (Elongin) subunit A; InterPro: IPR010684 This family represents a conserved region within RNA polymerase II transcription factor SIII (Elongin) subunit A. In mammals, the Elongin complex activates elongation by RNA polymerase II by suppressing transient pausing of the polymerase at many sites within transcription units. Elongin is a heterotrimer composed of A, B, and C subunits of 110, 18, and 15 kilodaltons, respectively. Subunit A has been shown to function as the transcriptionally active component of Elongin [].; GO: 0006355 regulation of transcription, DNA-dependent, 0005634 nucleus, 0016021 integral to membrane
Probab=94.27 E-value=0.035 Score=53.28 Aligned_cols=67 Identities=19% Similarity=0.333 Sum_probs=54.2
Q ss_pred CCCCCCCCHHHHHHHHhcCCHHHHHHHHHHhHHHHHHccCchhHHHHHHhhcCCc---e--eecCccceeeccc
Q 002043 18 LGDLKIIPDEIICSILEHLTPRDVGRLACVSSVMYIFCNEEPLWMSLCLKKASGV---L--QYKGSWKKTALHL 86 (976)
Q Consensus 18 lG~l~~LPdEll~~Ils~L~~~dL~~L~~vsr~fy~~~~~d~LWr~~~~~~~~~~---~--~~~gSWr~tyl~~ 86 (976)
+.++-.+|-++|.-||..++|..|.++-..|..+... .++||+.+|.+.++.. . +-..|||.+|...
T Consensus 1 i~dvG~~py~ll~piL~~~~~~QL~~iE~~np~l~~~--tdeLW~~~i~rdFp~~~~~~~~~~~~~Wr~~Y~~~ 72 (109)
T PF06881_consen 1 IEDVGDVPYHLLRPILEKCSPEQLRRIEDNNPHLIED--TDELWKKLIKRDFPEESKRQKPKEPESWRELYEKL 72 (109)
T ss_pred CCccCCCCHHHHHHHHccCCHHHHHHHHHhCCCcchh--hHHHHHHHHHhHCcChhhcccccccchHHHHHHHH
Confidence 3456779999999999999999999999999655543 7899999999999631 1 1224999999974
No 294
>cd07836 STKc_Pho85 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85. Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment.
Probab=94.22 E-value=0.3 Score=52.75 Aligned_cols=16 Identities=19% Similarity=0.428 Sum_probs=14.4
Q ss_pred eEEecCCCCCCeEEcc
Q 002043 814 SWIHSDIMDDNVYMEP 829 (976)
Q Consensus 814 v~iHgDl~~~NILv~~ 829 (976)
-++|+|++|+||+++.
T Consensus 120 ~i~h~dl~p~ni~~~~ 135 (284)
T cd07836 120 RVLHRDLKPQNLLINK 135 (284)
T ss_pred CeeeCCCCHHHEEECC
Confidence 4799999999999975
No 295
>cd06629 STKc_MAPKKK_Bck1_like Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell inte
Probab=94.21 E-value=0.46 Score=51.06 Aligned_cols=16 Identities=25% Similarity=0.582 Sum_probs=14.4
Q ss_pred eEEecCCCCCCeEEcc
Q 002043 814 SWIHSDIMDDNVYMEP 829 (976)
Q Consensus 814 v~iHgDl~~~NILv~~ 829 (976)
-++|+||+|+||++++
T Consensus 128 ~i~H~dl~~~nil~~~ 143 (272)
T cd06629 128 GILHRDLKADNLLVDA 143 (272)
T ss_pred CeeecCCChhhEEEcC
Confidence 4799999999999975
No 296
>cd06657 STKc_PAK4 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell mo
Probab=94.20 E-value=0.25 Score=54.37 Aligned_cols=16 Identities=31% Similarity=0.536 Sum_probs=14.1
Q ss_pred eEEecCCCCCCeEEcc
Q 002043 814 SWIHSDIMDDNVYMEP 829 (976)
Q Consensus 814 v~iHgDl~~~NILv~~ 829 (976)
-++|+||+|.||+++.
T Consensus 136 givH~dl~p~Nilv~~ 151 (292)
T cd06657 136 GVIHRDIKSDSILLTH 151 (292)
T ss_pred CeecCCCCHHHEEECC
Confidence 3699999999999975
No 297
>TIGR03404 bicupin_oxalic bicupin, oxalate decarboxylase family. Members of this protein family are defined as bicupins as they have two copies of the cupin domain (pfam00190). Two different known activities for members of this family are oxalate decarboxylase (EC 4.1.1.2) and oxalate oxidase (EC 1.2.3.4), although the latter activity has more often been found in distantly related monocupin (germin) proteins.
Probab=94.18 E-value=0.15 Score=59.06 Aligned_cols=62 Identities=18% Similarity=0.313 Sum_probs=48.3
Q ss_pred cCCCCCcccccCCCCcccEEEEEEEEEEEEeCCCCCCCcceeeecCCCCCccccCCcchhhhhhhCCCCCCCCCCEEEEE
Q 002043 258 PQRSGASWHVDPALTSAWNTLLCGRKRWALYPPGRVPLGVTVHVNEDDGDVNIETPSSLEWWLDFYPLLADDDKPIECTQ 337 (976)
Q Consensus 258 p~gSgT~lH~Dp~~t~awn~qI~GrKrW~LfPP~~~p~~v~~~~~~~~s~vd~~~Pdsl~W~l~~yP~l~~~~~~~e~vL 337 (976)
.+|..+++|++++. +=|..++.|+=+..++.++. ...+..+
T Consensus 253 ~PG~~~~~H~H~~~-~E~~yvl~G~~~~~v~d~~g--------------------------------------~~~~~~l 293 (367)
T TIGR03404 253 EPGAMRELHWHPNA-DEWQYFIQGQARMTVFAAGG--------------------------------------NARTFDY 293 (367)
T ss_pred CCCCccCCeeCcCC-CeEEEEEEEEEEEEEEecCC--------------------------------------cEEEEEE
Confidence 35777889999874 35899999998877765431 1134569
Q ss_pred cCCCEEEeCCCCceeeEecCC
Q 002043 338 LPGETIVVPSGWWHCILNLET 358 (976)
Q Consensus 338 ~PGDvLfVP~GWWH~V~NLd~ 358 (976)
+|||++|||.|..|.+.|.++
T Consensus 294 ~~GD~~~iP~g~~H~i~N~G~ 314 (367)
T TIGR03404 294 QAGDVGYVPRNMGHYVENTGD 314 (367)
T ss_pred CCCCEEEECCCCeEEEEECCC
Confidence 999999999999999999974
No 298
>cd07861 STKc_CDK1_euk Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2
Probab=94.12 E-value=0.29 Score=52.84 Aligned_cols=17 Identities=18% Similarity=0.389 Sum_probs=14.7
Q ss_pred CeEEecCCCCCCeEEcc
Q 002043 813 CSWIHSDIMDDNVYMEP 829 (976)
Q Consensus 813 pv~iHgDl~~~NILv~~ 829 (976)
.-++|+||+|+||+++.
T Consensus 120 ~~i~H~dl~p~nil~~~ 136 (285)
T cd07861 120 RRVLHRDLKPQNLLIDN 136 (285)
T ss_pred CCeeecCCCHHHEEEcC
Confidence 34799999999999975
No 299
>cd05118 STKc_CMGC Catalytic domain of CMGC family Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They
Probab=94.07 E-value=0.28 Score=52.71 Aligned_cols=16 Identities=19% Similarity=0.509 Sum_probs=14.3
Q ss_pred eEEecCCCCCCeEEcc
Q 002043 814 SWIHSDIMDDNVYMEP 829 (976)
Q Consensus 814 v~iHgDl~~~NILv~~ 829 (976)
-++|+||+|.||+++.
T Consensus 118 ~i~H~dl~p~nili~~ 133 (283)
T cd05118 118 GILHRDLKPENLLINT 133 (283)
T ss_pred CeeecCcCHHHEEECC
Confidence 4799999999999975
No 300
>cd07839 STKc_CDK5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also
Probab=94.05 E-value=0.27 Score=53.20 Aligned_cols=16 Identities=19% Similarity=0.451 Sum_probs=14.2
Q ss_pred eEEecCCCCCCeEEcc
Q 002043 814 SWIHSDIMDDNVYMEP 829 (976)
Q Consensus 814 v~iHgDl~~~NILv~~ 829 (976)
-++|+||+|+||+++.
T Consensus 119 ~i~H~dl~~~nil~~~ 134 (284)
T cd07839 119 NVLHRDLKPQNLLINK 134 (284)
T ss_pred CEecCCCCHHHEEEcC
Confidence 4699999999999975
No 301
>KOG3653 consensus Transforming growth factor beta/activin receptor subfamily of serine/threonine kinases [Signal transduction mechanisms]
Probab=94.05 E-value=0.13 Score=60.13 Aligned_cols=42 Identities=14% Similarity=0.174 Sum_probs=35.0
Q ss_pred ccEEEEecccCccchhhh--hcCCHHHHHHHHHHHHHHHHHhhC
Q 002043 672 WPYIITKRCKGKMFAQLR--DALSGEDVLNLASFLGEQLRNLHL 713 (976)
Q Consensus 672 WpYiVm~rl~G~~l~~v~--~~Ls~ed~~~La~~LG~~L~~LHs 713 (976)
=+|+||++=+--.|.+-. ..+|..+-.+||..+++=|+.||.
T Consensus 282 eywLVt~fh~kGsL~dyL~~ntisw~~~cria~SmarGLa~LHe 325 (534)
T KOG3653|consen 282 EYWLVTEFHPKGSLCDYLKANTISWNSLCRIAESMARGLAHLHE 325 (534)
T ss_pred ceeEEeeeccCCcHHHHHHhccccHHHHHHHHHHHHHHHHHhcc
Confidence 479999999888888743 467888999999999999998884
No 302
>cd06652 STKc_MEKK2 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 2. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 2 (MEKK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK2 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their re
Probab=94.03 E-value=0.38 Score=51.55 Aligned_cols=15 Identities=27% Similarity=0.501 Sum_probs=13.6
Q ss_pred EEecCCCCCCeEEcc
Q 002043 815 WIHSDIMDDNVYMEP 829 (976)
Q Consensus 815 ~iHgDl~~~NILv~~ 829 (976)
++|+||+|.||++++
T Consensus 127 i~H~dl~p~nil~~~ 141 (265)
T cd06652 127 IVHRDIKGANILRDS 141 (265)
T ss_pred EecCCCCHHHEEecC
Confidence 699999999999975
No 303
>cd07880 STKc_p38gamma_MAPK12 Catalytic domain of the Serine/Threonine Kinase, p38gamma Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38gamma subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38gamma subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38gamma, also called MAPK12
Probab=93.98 E-value=0.33 Score=54.82 Aligned_cols=16 Identities=25% Similarity=0.403 Sum_probs=14.1
Q ss_pred eEEecCCCCCCeEEcc
Q 002043 814 SWIHSDIMDDNVYMEP 829 (976)
Q Consensus 814 v~iHgDl~~~NILv~~ 829 (976)
-++|+||+|.||+++.
T Consensus 138 gi~H~dlkp~Nill~~ 153 (343)
T cd07880 138 GIIHRDLKPGNLAVNE 153 (343)
T ss_pred CeecCCCCHHHEEEcC
Confidence 3699999999999975
No 304
>cd06658 STKc_PAK5 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly express
Probab=93.97 E-value=0.22 Score=54.83 Aligned_cols=16 Identities=31% Similarity=0.567 Sum_probs=14.1
Q ss_pred eEEecCCCCCCeEEcc
Q 002043 814 SWIHSDIMDDNVYMEP 829 (976)
Q Consensus 814 v~iHgDl~~~NILv~~ 829 (976)
-++|+||+|.||++++
T Consensus 138 ~ivH~dlkp~Nill~~ 153 (292)
T cd06658 138 GVIHRDIKSDSILLTS 153 (292)
T ss_pred CEeecCCCHHHEEEcC
Confidence 3699999999999975
No 305
>cd06624 STKc_ASK Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase. Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kina
Probab=93.93 E-value=0.36 Score=51.86 Aligned_cols=17 Identities=18% Similarity=0.300 Sum_probs=14.6
Q ss_pred ccEEEEecccCccchhh
Q 002043 672 WPYIITKRCKGKMFAQL 688 (976)
Q Consensus 672 WpYiVm~rl~G~~l~~v 688 (976)
.+|+||++++|.+|.+.
T Consensus 79 ~~~lv~e~~~~~~L~~~ 95 (268)
T cd06624 79 FFKIFMEQVPGGSLSAL 95 (268)
T ss_pred EEEEEEecCCCCCHHHH
Confidence 58999999999988763
No 306
>cd05092 PTKc_TrkA Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory
Probab=93.91 E-value=0.37 Score=52.31 Aligned_cols=17 Identities=18% Similarity=0.427 Sum_probs=14.8
Q ss_pred CeEEecCCCCCCeEEcc
Q 002043 813 CSWIHSDIMDDNVYMEP 829 (976)
Q Consensus 813 pv~iHgDl~~~NILv~~ 829 (976)
.-++|+||+|+||+++.
T Consensus 141 ~~i~H~dlkp~nil~~~ 157 (280)
T cd05092 141 LHFVHRDLATRNCLVGQ 157 (280)
T ss_pred CCeecccccHhhEEEcC
Confidence 34899999999999965
No 307
>cd06637 STKc_TNIK Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase. Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activ
Probab=93.88 E-value=0.35 Score=51.83 Aligned_cols=16 Identities=38% Similarity=0.522 Sum_probs=14.4
Q ss_pred eEEecCCCCCCeEEcc
Q 002043 814 SWIHSDIMDDNVYMEP 829 (976)
Q Consensus 814 v~iHgDl~~~NILv~~ 829 (976)
-++|+|++++||++++
T Consensus 131 ~ivh~dl~~~nili~~ 146 (272)
T cd06637 131 KVIHRDIKGQNVLLTE 146 (272)
T ss_pred CCccCCCCHHHEEECC
Confidence 4799999999999975
No 308
>cd05053 PTKc_FGFR Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation,
Probab=93.86 E-value=0.41 Score=52.14 Aligned_cols=17 Identities=29% Similarity=0.403 Sum_probs=14.8
Q ss_pred CeEEecCCCCCCeEEcc
Q 002043 813 CSWIHSDIMDDNVYMEP 829 (976)
Q Consensus 813 pv~iHgDl~~~NILv~~ 829 (976)
.-++|+||+|.||+++.
T Consensus 151 ~~ivH~dlkp~Nil~~~ 167 (293)
T cd05053 151 KKCIHRDLAARNVLVTE 167 (293)
T ss_pred CCccccccceeeEEEcC
Confidence 35799999999999965
No 309
>cd06659 STKc_PAK6 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role i
Probab=93.82 E-value=0.31 Score=53.74 Aligned_cols=16 Identities=31% Similarity=0.511 Sum_probs=14.2
Q ss_pred eEEecCCCCCCeEEcc
Q 002043 814 SWIHSDIMDDNVYMEP 829 (976)
Q Consensus 814 v~iHgDl~~~NILv~~ 829 (976)
-++|+||+|.||+++.
T Consensus 137 ~ivH~dl~p~Nill~~ 152 (297)
T cd06659 137 GVIHRDIKSDSILLTL 152 (297)
T ss_pred CeecCCCCHHHeEEcc
Confidence 3699999999999975
No 310
>KOG2132 consensus Uncharacterized conserved protein, contains JmjC domain [Chromatin structure and dynamics; Signal transduction mechanisms]
Probab=93.81 E-value=0.019 Score=64.03 Aligned_cols=96 Identities=17% Similarity=0.169 Sum_probs=67.9
Q ss_pred eecCCCCCcccccCCCCcccEEEEEEEEEEEEeCCCCCCCcceeee-cC--CCCCccccCCcchhhhhhhCCCCCC-CCC
Q 002043 256 IGPQRSGASWHVDPALTSAWNTLLCGRKRWALYPPGRVPLGVTVHV-NE--DDGDVNIETPSSLEWWLDFYPLLAD-DDK 331 (976)
Q Consensus 256 iGp~gSgT~lH~Dp~~t~awn~qI~GrKrW~LfPP~~~p~~v~~~~-~~--~~s~vd~~~Pdsl~W~l~~yP~l~~-~~~ 331 (976)
++.....+..|.|-..+ +.+++.|-||-++++|.+.-. +..|. -+ ..-..|+..|| +.++|.+.. ...
T Consensus 180 vpvEvg~~y~~~~w~q~--l~t~~~g~~R~~~~~p~~~~Y-lAqh~lfdqi~elk~Di~iPD-----yc~~~~f~~~~v~ 251 (355)
T KOG2132|consen 180 VPVEVGSTYADEDWSQN--LMTQIKGIKRCILFEPRECLY-LAQHHLFDQIPELKFDISIPD-----YCSFPNFENEVVD 251 (355)
T ss_pred eeeecccccchhHHHhh--hHHHhhhhhhhhcCCccccch-hhhhhhhccchhhhhccCCCc-----eeecCCCCccccc
Confidence 45555678899998754 999999999999999993211 11110 00 11234677898 788888876 234
Q ss_pred CEEEEEcCCCEEEeCCCCceeeEecCCc
Q 002043 332 PIECTQLPGETIVVPSGWWHCILNLETT 359 (976)
Q Consensus 332 ~~e~vL~PGDvLfVP~GWWH~V~NLd~S 359 (976)
...++..+|++++||..|||.+....-.
T Consensus 252 ~~~w~GpaGtV~pih~dp~hNi~~qv~G 279 (355)
T KOG2132|consen 252 INAWIGPAGTVLPIHMDPWHNILSQVFG 279 (355)
T ss_pred eeEEeccCCceeccccccccceeeeeec
Confidence 5666777799999999999999987643
No 311
>cd06633 STKc_TAO3 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3. Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a co
Probab=93.77 E-value=0.52 Score=52.39 Aligned_cols=16 Identities=31% Similarity=0.540 Sum_probs=14.1
Q ss_pred eEEecCCCCCCeEEcc
Q 002043 814 SWIHSDIMDDNVYMEP 829 (976)
Q Consensus 814 v~iHgDl~~~NILv~~ 829 (976)
-++|+||+|+||+++.
T Consensus 141 gi~H~dl~p~nili~~ 156 (313)
T cd06633 141 NMIHRDIKAGNILLTE 156 (313)
T ss_pred CeecCCCChhhEEECC
Confidence 4699999999999965
No 312
>cd05064 PTKc_EphR_A10 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A10. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA10 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchor
Probab=93.76 E-value=0.45 Score=51.31 Aligned_cols=16 Identities=13% Similarity=0.482 Sum_probs=14.3
Q ss_pred eEEecCCCCCCeEEcc
Q 002043 814 SWIHSDIMDDNVYMEP 829 (976)
Q Consensus 814 v~iHgDl~~~NILv~~ 829 (976)
-++|+|++|.||+++.
T Consensus 127 ~iiH~dikp~nili~~ 142 (266)
T cd05064 127 GYVHKGLAAHKVLVNS 142 (266)
T ss_pred CEeeccccHhhEEEcC
Confidence 4799999999999975
No 313
>cd06655 STKc_PAK2 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=93.68 E-value=0.42 Score=52.64 Aligned_cols=16 Identities=6% Similarity=0.320 Sum_probs=13.8
Q ss_pred cEEEEecccCccchhh
Q 002043 673 PYIITKRCKGKMFAQL 688 (976)
Q Consensus 673 pYiVm~rl~G~~l~~v 688 (976)
.|+||++++|..+.+.
T Consensus 91 ~~lv~e~~~~~~L~~~ 106 (296)
T cd06655 91 LFVVMEYLAGGSLTDV 106 (296)
T ss_pred EEEEEEecCCCcHHHH
Confidence 6999999999988763
No 314
>cd06643 STKc_SLK Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase. Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration.
Probab=93.66 E-value=0.54 Score=50.94 Aligned_cols=16 Identities=25% Similarity=0.420 Sum_probs=14.0
Q ss_pred eEEecCCCCCCeEEcc
Q 002043 814 SWIHSDIMDDNVYMEP 829 (976)
Q Consensus 814 v~iHgDl~~~NILv~~ 829 (976)
-++|+||+|.||+++.
T Consensus 123 ~i~H~dlkp~nili~~ 138 (282)
T cd06643 123 KIIHRDLKAGNILFTL 138 (282)
T ss_pred CeeecCCCcccEEEcc
Confidence 3699999999999965
No 315
>KOG0596 consensus Dual specificity; serine/threonine and tyrosine kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=93.63 E-value=0.093 Score=62.42 Aligned_cols=42 Identities=24% Similarity=0.321 Sum_probs=32.7
Q ss_pred CCCCcceEEec-----ceEEEEee-cCCcccccccchhHHHHHHHHHhhCC
Q 002043 545 GNGSNPVYLMA-----DCVVKIFV-EGGFESSIYGLGTELEFYSLLAKVNS 589 (976)
Q Consensus 545 ~~gs~pv~~v~-----~~v~K~~~-~~~~~~s~~~~~~e~~~y~~l~~~~~ 589 (976)
-+||+-||.|- .|.+|-.+ ..+-....+|+..|.+ +|.|+.+
T Consensus 371 ~GGSSkV~kV~~s~~~iyalkkv~~~~~D~qtl~gy~nEI~---lL~KLkg 418 (677)
T KOG0596|consen 371 SGGSSKVFKVLNSDKQIYALKKVVLLEADNQTLDGYRNEIA---LLNKLKG 418 (677)
T ss_pred CCCcceeeeeecCCCcchhhhHHHHhhcCHHHHHHHHHHHH---HHHHhcC
Confidence 35799999996 45666555 7799999999999999 5666566
No 316
>PHA02988 hypothetical protein; Provisional
Probab=93.57 E-value=0.38 Score=52.84 Aligned_cols=17 Identities=12% Similarity=0.262 Sum_probs=14.4
Q ss_pred ccEEEEecccCccchhh
Q 002043 672 WPYIITKRCKGKMFAQL 688 (976)
Q Consensus 672 WpYiVm~rl~G~~l~~v 688 (976)
..|+||++++|.+|.+.
T Consensus 96 ~~~lv~Ey~~~g~L~~~ 112 (283)
T PHA02988 96 RLSLILEYCTRGYLREV 112 (283)
T ss_pred ceEEEEEeCCCCcHHHH
Confidence 45899999999988764
No 317
>cd07840 STKc_CDK9_like Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA po
Probab=93.53 E-value=0.4 Score=51.58 Aligned_cols=16 Identities=25% Similarity=0.511 Sum_probs=14.2
Q ss_pred eEEecCCCCCCeEEcc
Q 002043 814 SWIHSDIMDDNVYMEP 829 (976)
Q Consensus 814 v~iHgDl~~~NILv~~ 829 (976)
-++|+|++|.||++++
T Consensus 120 ~~~h~dl~p~nil~~~ 135 (287)
T cd07840 120 GILHRDIKGSNILINN 135 (287)
T ss_pred CceeccCcHHHeEEcC
Confidence 4699999999999975
No 318
>PTZ00024 cyclin-dependent protein kinase; Provisional
Probab=93.50 E-value=0.39 Score=53.70 Aligned_cols=17 Identities=18% Similarity=0.587 Sum_probs=14.7
Q ss_pred CeEEecCCCCCCeEEcc
Q 002043 813 CSWIHSDIMDDNVYMEP 829 (976)
Q Consensus 813 pv~iHgDl~~~NILv~~ 829 (976)
.-++|+||+++||+++.
T Consensus 138 ~~i~H~dl~~~nill~~ 154 (335)
T PTZ00024 138 WYFMHRDLSPANIFINS 154 (335)
T ss_pred CCeecccccHHHeEECC
Confidence 35799999999999975
No 319
>cd06612 STKc_MST1_2 Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a
Probab=93.49 E-value=0.45 Score=50.32 Aligned_cols=17 Identities=12% Similarity=0.311 Sum_probs=14.6
Q ss_pred ccEEEEecccCccchhh
Q 002043 672 WPYIITKRCKGKMFAQL 688 (976)
Q Consensus 672 WpYiVm~rl~G~~l~~v 688 (976)
..|+||++++|..+.+.
T Consensus 72 ~~~l~~e~~~~~~L~~~ 88 (256)
T cd06612 72 DLWIVMEYCGAGSVSDI 88 (256)
T ss_pred cEEEEEecCCCCcHHHH
Confidence 47999999999988764
No 320
>cd05087 PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases 1 and 3. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 1 (Aatyk1) and Aatyk3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk1 and Aatyk3 are members of the Aatyk subfamily of proteins. Aatyk3 is a receptor kinase containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 has a similar domain arrangement but without the transmembrane segment and is thus, a cytoplasmic (or nonreceptor) kinase. The expression of Aatyk1 (also referred simply as Aatyk) is upregulated during growth arrest and apoptosis in myeloid cells
Probab=93.47 E-value=0.58 Score=50.33 Aligned_cols=17 Identities=29% Similarity=0.475 Sum_probs=15.0
Q ss_pred CeEEecCCCCCCeEEcc
Q 002043 813 CSWIHSDIMDDNVYMEP 829 (976)
Q Consensus 813 pv~iHgDl~~~NILv~~ 829 (976)
.-++|+|++|+||++++
T Consensus 119 ~~i~H~dlkp~nil~~~ 135 (269)
T cd05087 119 NNFIHSDLALRNCLLTA 135 (269)
T ss_pred CCEeccccCcceEEEcC
Confidence 35899999999999975
No 321
>cd07844 STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), PCTAIRE-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily share sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The association of PCTAIRE-like proteins with cyclins has not been widely studied, although PFTAIRE-1 has been shown to function as a CDK which is regulated by cyclin D3 as well as the
Probab=93.31 E-value=0.46 Score=51.69 Aligned_cols=16 Identities=19% Similarity=0.416 Sum_probs=14.3
Q ss_pred eEEecCCCCCCeEEcc
Q 002043 814 SWIHSDIMDDNVYMEP 829 (976)
Q Consensus 814 v~iHgDl~~~NILv~~ 829 (976)
-++|+||+|.||+++.
T Consensus 123 ~i~H~dl~p~nil~~~ 138 (291)
T cd07844 123 RVLHRDLKPQNLLISE 138 (291)
T ss_pred CeecccCCHHHEEEcC
Confidence 4699999999999975
No 322
>cd06607 STKc_TAO Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins. Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily
Probab=93.25 E-value=0.48 Score=52.25 Aligned_cols=16 Identities=31% Similarity=0.513 Sum_probs=14.1
Q ss_pred eEEecCCCCCCeEEcc
Q 002043 814 SWIHSDIMDDNVYMEP 829 (976)
Q Consensus 814 v~iHgDl~~~NILv~~ 829 (976)
-++|+||+|.||+++.
T Consensus 135 ~i~H~dl~p~nIl~~~ 150 (307)
T cd06607 135 ERIHRDIKAGNILLTE 150 (307)
T ss_pred CceecCCCcccEEECC
Confidence 4699999999999975
No 323
>cd06635 STKc_TAO1 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1. Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuron
Probab=93.23 E-value=0.65 Score=51.65 Aligned_cols=17 Identities=29% Similarity=0.483 Sum_probs=14.5
Q ss_pred CeEEecCCCCCCeEEcc
Q 002043 813 CSWIHSDIMDDNVYMEP 829 (976)
Q Consensus 813 pv~iHgDl~~~NILv~~ 829 (976)
.-++|+||+|+||+++.
T Consensus 144 ~~i~H~dL~p~Nil~~~ 160 (317)
T cd06635 144 HNMIHRDIKAGNILLTE 160 (317)
T ss_pred CCcccCCCCcccEEECC
Confidence 34699999999999965
No 324
>cd06618 PKc_MKK7 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 7. Protein kinases (PKs), MAP kinase kinase 7 (MKK7) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK7 is a dual-specificity PK that phosphorylates and activates it
Probab=93.14 E-value=0.35 Score=53.01 Aligned_cols=16 Identities=25% Similarity=0.553 Sum_probs=14.2
Q ss_pred eEEecCCCCCCeEEcc
Q 002043 814 SWIHSDIMDDNVYMEP 829 (976)
Q Consensus 814 v~iHgDl~~~NILv~~ 829 (976)
-++|+||+|.||+++.
T Consensus 135 ~i~H~dl~p~nill~~ 150 (296)
T cd06618 135 GVIHRDVKPSNILLDA 150 (296)
T ss_pred CEecCCCcHHHEEEcC
Confidence 4799999999999965
No 325
>cd07841 STKc_CDK7 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is
Probab=93.14 E-value=0.56 Score=51.21 Aligned_cols=15 Identities=20% Similarity=0.510 Sum_probs=13.8
Q ss_pred EEecCCCCCCeEEcc
Q 002043 815 WIHSDIMDDNVYMEP 829 (976)
Q Consensus 815 ~iHgDl~~~NILv~~ 829 (976)
++|+||.|.||+++.
T Consensus 123 i~H~dl~p~nill~~ 137 (298)
T cd07841 123 ILHRDLKPNNLLIAS 137 (298)
T ss_pred eeecCCChhhEEEcC
Confidence 699999999999975
No 326
>cd05032 PTKc_InsR_like Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological
Probab=93.14 E-value=0.48 Score=50.92 Aligned_cols=17 Identities=18% Similarity=0.407 Sum_probs=14.9
Q ss_pred CeEEecCCCCCCeEEcc
Q 002043 813 CSWIHSDIMDDNVYMEP 829 (976)
Q Consensus 813 pv~iHgDl~~~NILv~~ 829 (976)
.-++|+||.|+||+++.
T Consensus 138 ~~i~H~di~p~nill~~ 154 (277)
T cd05032 138 KKFVHRDLAARNCMVAE 154 (277)
T ss_pred CCccccccChheEEEcC
Confidence 45799999999999975
No 327
>TIGR03037 anthran_nbaC 3-hydroxyanthranilate 3,4-dioxygenase. Members of this protein family, from both bacteria and eukaryotes, are the enzyme 3-hydroxyanthranilate 3,4-dioxygenase. This enzyme acts on the tryptophan metabolite 3-hydroxyanthranilate and produces 2-amino-3-carboxymuconate semialdehyde, which can rearrange spontaneously to quinolinic acid and feed into nicotinamide biosynthesis, or undergo further enzymatic degradation.
Probab=93.14 E-value=0.43 Score=48.89 Aligned_cols=78 Identities=15% Similarity=0.217 Sum_probs=58.6
Q ss_pred cceEEeecCCCCCcccccCCCCcccEEEEEEEEEEEEeCCCCCCCcceeeecCCCCCccccCCcchhhhhhhCCCCCCCC
Q 002043 251 YRWVIIGPQRSGASWHVDPALTSAWNTLLCGRKRWALYPPGRVPLGVTVHVNEDDGDVNIETPSSLEWWLDFYPLLADDD 330 (976)
Q Consensus 251 ~rwL~iGp~gSgT~lH~Dp~~t~awn~qI~GrKrW~LfPP~~~p~~v~~~~~~~~s~vd~~~Pdsl~W~l~~yP~l~~~~ 330 (976)
+.-+.+|.++..+.+|.++. .-|+.|+.|.=...+...+
T Consensus 29 ~~v~~vgGpn~R~d~H~~~t--dE~FyqleG~~~l~v~d~g--------------------------------------- 67 (159)
T TIGR03037 29 FMVTVVGGPNARTDFHDDPG--EEFFYQLKGEMYLKVTEEG--------------------------------------- 67 (159)
T ss_pred EEEEEeCCCCCCcccccCCC--ceEEEEEcceEEEEEEcCC---------------------------------------
Confidence 44567888888999999874 4599999997444331110
Q ss_pred CCEEEEEcCCCEEEeCCCCceeeEecCCcEEEeecccCC
Q 002043 331 KPIECTQLPGETIVVPSGWWHCILNLETTIAVTQNFVDS 369 (976)
Q Consensus 331 ~~~e~vL~PGDvLfVP~GWWH~V~NLd~SISVt~NFv~~ 369 (976)
+..++.+++||+++||+|-.|.....++|+.+-.--..+
T Consensus 68 ~~~~v~L~eGd~flvP~gvpHsP~r~~~t~~LvIE~~r~ 106 (159)
T TIGR03037 68 KREDVPIREGDIFLLPPHVPHSPQRPAGSIGLVIERKRP 106 (159)
T ss_pred cEEEEEECCCCEEEeCCCCCcccccCCCcEEEEEEeCCC
Confidence 224688999999999999999999999998887654433
No 328
>cd05111 PTK_HER3 Pseudokinase domain of the Protein Tyrosine Kinase, HER3. Protein Tyrosine Kinase (PTK) family; HER3 (ErbB3); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER3 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr r
Probab=93.13 E-value=0.7 Score=50.24 Aligned_cols=16 Identities=13% Similarity=0.474 Sum_probs=14.4
Q ss_pred eEEecCCCCCCeEEcc
Q 002043 814 SWIHSDIMDDNVYMEP 829 (976)
Q Consensus 814 v~iHgDl~~~NILv~~ 829 (976)
-++|+||+|+||++++
T Consensus 129 ~iiH~dlkp~nili~~ 144 (279)
T cd05111 129 RMVHRNLAARNILLKS 144 (279)
T ss_pred CEeccccCcceEEEcC
Confidence 4799999999999975
No 329
>KOG0615 consensus Serine/threonine protein kinase Chk2 and related proteins [Cell cycle control, cell division, chromosome partitioning]
Probab=93.09 E-value=0.67 Score=53.81 Aligned_cols=33 Identities=27% Similarity=0.367 Sum_probs=25.9
Q ss_pred eEEecCCCCCCeEEccCCcccCCCCCCCCCCCccCCCCCCCCccCcCccceeeEEEeCCCCCC
Q 002043 814 SWIHSDIMDDNVYMEPCCASSRSNGNAADTGPMVNGSINGYDEFGEAKSWHCSHIIDFSNLSI 876 (976)
Q Consensus 814 v~iHgDl~~~NILv~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~~~~~~w~~sGIIDFgd~~i 876 (976)
=.+|.||+|+|||++.+. ++ .+.-|=|||-+.+
T Consensus 296 GI~HRDiKPeNILl~~~~----------------------e~--------~llKItDFGlAK~ 328 (475)
T KOG0615|consen 296 GIIHRDIKPENILLSNDA----------------------ED--------CLLKITDFGLAKV 328 (475)
T ss_pred CcccccCCcceEEeccCC----------------------cc--------eEEEecccchhhc
Confidence 459999999999997531 12 6788999998876
No 330
>cd05086 PTKc_Aatyk2 Catalytic domain of the Protein Tyrosine Kinase, Apoptosis-associated tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 2 (Aatyk2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk2 is a member of the Aatyk subfamily of proteins, which are receptor kinases containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk2 is also called lemur tyrosine kinase 2 (Lmtk2) or brain-enriched kinase (Brek). It is expressed at high levels in early postnatal brain, and has been shown to play a role in nerve growth factor (NGF) signaling. Studies with knockout mice reveal that Aatyk2 is essential for late stage
Probab=93.07 E-value=0.81 Score=49.35 Aligned_cols=16 Identities=25% Similarity=0.625 Sum_probs=14.2
Q ss_pred eEEecCCCCCCeEEcc
Q 002043 814 SWIHSDIMDDNVYMEP 829 (976)
Q Consensus 814 v~iHgDl~~~NILv~~ 829 (976)
-++|+|++|+|||++.
T Consensus 119 ~i~H~dikp~nil~~~ 134 (268)
T cd05086 119 NFLHSDLALRNCFLTS 134 (268)
T ss_pred CeeccCCccceEEEcC
Confidence 3799999999999965
No 331
>KOG0192 consensus Tyrosine kinase specific for activated (GTP-bound) p21cdc42Hs [Signal transduction mechanisms]
Probab=93.07 E-value=0.65 Score=53.80 Aligned_cols=15 Identities=33% Similarity=0.627 Sum_probs=14.4
Q ss_pred EEecCCCCCCeEEcc
Q 002043 815 WIHSDIMDDNVYMEP 829 (976)
Q Consensus 815 ~iHgDl~~~NILv~~ 829 (976)
+||+||++.||||+.
T Consensus 164 iIHrDLK~~NiLv~~ 178 (362)
T KOG0192|consen 164 IIHRDLKSDNILVDL 178 (362)
T ss_pred eeecccChhhEEEcC
Confidence 999999999999986
No 332
>cd07843 STKc_CDC2L1 Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1. Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the
Probab=93.06 E-value=0.61 Score=50.84 Aligned_cols=16 Identities=19% Similarity=0.386 Sum_probs=14.2
Q ss_pred eEEecCCCCCCeEEcc
Q 002043 814 SWIHSDIMDDNVYMEP 829 (976)
Q Consensus 814 v~iHgDl~~~NILv~~ 829 (976)
-++|+||+|+||+++.
T Consensus 126 ~i~H~dl~p~nili~~ 141 (293)
T cd07843 126 WILHRDLKTSNLLLNN 141 (293)
T ss_pred CeeeccCCHHHEEECC
Confidence 3799999999999975
No 333
>cd07842 STKc_CDK8_like Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the
Probab=93.05 E-value=0.63 Score=51.07 Aligned_cols=16 Identities=19% Similarity=0.266 Sum_probs=14.5
Q ss_pred eEEecCCCCCCeEEcc
Q 002043 814 SWIHSDIMDDNVYMEP 829 (976)
Q Consensus 814 v~iHgDl~~~NILv~~ 829 (976)
-++|+||+|.||+++.
T Consensus 128 ~i~h~dlkp~Nil~~~ 143 (316)
T cd07842 128 WVLHRDLKPANILVMG 143 (316)
T ss_pred CEeeCCCCHHHEEEcC
Confidence 4799999999999975
No 334
>PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional
Probab=93.04 E-value=0.54 Score=60.81 Aligned_cols=41 Identities=29% Similarity=0.340 Sum_probs=28.8
Q ss_pred ccEEEEecccCccchhhhhcCCHHHHHHHHHHHHHHHHHhh
Q 002043 672 WPYIITKRCKGKMFAQLRDALSGEDVLNLASFLGEQLRNLH 712 (976)
Q Consensus 672 WpYiVm~rl~G~~l~~v~~~Ls~ed~~~La~~LG~~L~~LH 712 (976)
-.|+|||+++|.+|.+....++.+++..++.++++-++-||
T Consensus 757 ~~~lv~Ey~~~g~L~~~l~~l~~~~~~~i~~~ia~~L~yLH 797 (968)
T PLN00113 757 GAYLIHEYIEGKNLSEVLRNLSWERRRKIAIGIAKALRFLH 797 (968)
T ss_pred CCEEEEeCCCCCcHHHHHhcCCHHHHHHHHHHHHHHHHHhc
Confidence 36999999999999887655565555555555555555555
No 335
>cd07838 STKc_CDK4_6_like Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both
Probab=93.02 E-value=0.84 Score=49.17 Aligned_cols=16 Identities=19% Similarity=0.459 Sum_probs=14.4
Q ss_pred eEEecCCCCCCeEEcc
Q 002043 814 SWIHSDIMDDNVYMEP 829 (976)
Q Consensus 814 v~iHgDl~~~NILv~~ 829 (976)
-++|+|++++||++++
T Consensus 127 ~i~h~~l~~~nili~~ 142 (287)
T cd07838 127 RIVHRDLKPQNILVTS 142 (287)
T ss_pred CeeeccCChhhEEEcc
Confidence 4799999999999975
No 336
>KOG1165 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=92.99 E-value=0.72 Score=52.34 Aligned_cols=51 Identities=27% Similarity=0.391 Sum_probs=33.7
Q ss_pred cCCCCcceEEec-------ceEEEEeecCCcccccccchhHHHHHHHHHhhCCCCCcccccceecc
Q 002043 544 VGNGSNPVYLMA-------DCVVKIFVEGGFESSIYGLGTELEFYSLLAKVNSPLKNYIPDVLASG 602 (976)
Q Consensus 544 ~~~gs~pv~~v~-------~~v~K~~~~~~~~~s~~~~~~e~~~y~~l~~~~~~l~~~~P~~~~~g 602 (976)
+|.||==|...| -..||+-|-....-- |.-|-.||.+|....+ ||.|-+-|
T Consensus 36 IGeGsFG~lf~G~Nl~nne~VAIKfEPrkS~APQ---LrdEYr~YKlL~g~~G-----IP~vYYFG 93 (449)
T KOG1165|consen 36 IGEGSFGVLFLGKNLYNNEPVAIKFEPRKSEAPQ---LRDEYRTYKLLGGTEG-----IPQVYYFG 93 (449)
T ss_pred cccCcceeeecccccccCceEEEEeccccCCcch---HHHHHHHHHHHcCCCC-----CCceeeec
Confidence 466766666666 356888883222212 6688899999975555 88887665
No 337
>KOG1187 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=92.97 E-value=0.68 Score=53.58 Aligned_cols=20 Identities=30% Similarity=0.453 Sum_probs=17.5
Q ss_pred CCCeEEecCCCCCCeEEccC
Q 002043 811 KPCSWIHSDIMDDNVYMEPC 830 (976)
Q Consensus 811 ~~pv~iHgDl~~~NILv~~~ 830 (976)
.+|.+||+||++.|||.+.+
T Consensus 194 ~~~~iiHrDiKssNILLD~~ 213 (361)
T KOG1187|consen 194 CPPPIIHRDIKSSNILLDED 213 (361)
T ss_pred CCCCEecCCCCHHHeeECCC
Confidence 46789999999999999863
No 338
>cd05107 PTKc_PDGFR_beta Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor beta. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) beta; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR beta is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR beta forms homodimers or heterodimers with PDGFR alpha, depending on the nature of the PDGF ligand. PDGF-BB and PDGF-D
Probab=92.95 E-value=0.62 Score=54.45 Aligned_cols=17 Identities=24% Similarity=0.362 Sum_probs=14.8
Q ss_pred CeEEecCCCCCCeEEcc
Q 002043 813 CSWIHSDIMDDNVYMEP 829 (976)
Q Consensus 813 pv~iHgDl~~~NILv~~ 829 (976)
.-++|+||+|.|||++.
T Consensus 258 ~~ivHrdlkp~NiLl~~ 274 (401)
T cd05107 258 KNCVHRDLAARNVLICE 274 (401)
T ss_pred CCcCcccCCcceEEEeC
Confidence 45799999999999975
No 339
>cd05103 PTKc_VEGFR2 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 2. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 2 (VEGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR2 (or Flk1) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. The carboxyl terminus of VEGFR2 plays an important role in its autophosp
Probab=92.89 E-value=0.68 Score=52.32 Aligned_cols=18 Identities=22% Similarity=0.421 Sum_probs=15.5
Q ss_pred CCeEEecCCCCCCeEEcc
Q 002043 812 PCSWIHSDIMDDNVYMEP 829 (976)
Q Consensus 812 ~pv~iHgDl~~~NILv~~ 829 (976)
..-++|+||+|.||+++.
T Consensus 197 ~~~i~H~dikp~Nil~~~ 214 (343)
T cd05103 197 SRKCIHRDLAARNILLSE 214 (343)
T ss_pred hCCeecCCCccCeEEEcC
Confidence 346899999999999975
No 340
>cd05576 STKc_RPK118_like Catalytic domain of the Protein Serine/Threonine Kinases, RPK118 and similar proteins. Serine/Threonine Kinases (STKs), RPK118-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RPK118-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily show similarity to human RPK118, which contains an N-terminal Phox homology (PX) domain, a Microtubule Interacting and Trafficking (MIT) domain, and a kinase domain containing a long insert. Also included in the family is human RPK60 (or ribosomal protein S6 kinase-like 1), which also contains MIT and kinase domains but lacks a PX domain. RPK118 binds sphingosine kinase, a key enzyme in the synthesis of sphingosine 1-phospha
Probab=92.85 E-value=0.22 Score=52.93 Aligned_cols=17 Identities=12% Similarity=0.309 Sum_probs=14.9
Q ss_pred CeEEecCCCCCCeEEcc
Q 002043 813 CSWIHSDIMDDNVYMEP 829 (976)
Q Consensus 813 pv~iHgDl~~~NILv~~ 829 (976)
.-++|+|++|.||+++.
T Consensus 104 ~~i~H~dlkp~Nil~~~ 120 (237)
T cd05576 104 EGIVCRDLNPNNILLDD 120 (237)
T ss_pred CCeeccCCCHHHEEEcC
Confidence 35799999999999975
No 341
>cd07855 STKc_ERK5 Catalytic domain of the Serine/Threonine Kinase, Extracellular signal-Regulated Kinase 5. Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the
Probab=92.71 E-value=0.56 Score=52.59 Aligned_cols=16 Identities=25% Similarity=0.451 Sum_probs=14.1
Q ss_pred eEEecCCCCCCeEEcc
Q 002043 814 SWIHSDIMDDNVYMEP 829 (976)
Q Consensus 814 v~iHgDl~~~NILv~~ 829 (976)
-++|+||+|.||+++.
T Consensus 127 ~ivH~dlkp~Nil~~~ 142 (334)
T cd07855 127 NVIHRDLKPSNLLVNE 142 (334)
T ss_pred CeecCCCCHHHEEEcC
Confidence 3799999999999975
No 342
>cd08216 PK_STRAD Pseudokinase domain of STE20-related kinase adapter protein. Protein Kinase family, STE20-related kinase adapter protein (STRAD) subfamily, pseudokinase domain. The STRAD subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpigmentation of the buc
Probab=92.68 E-value=0.88 Score=50.15 Aligned_cols=16 Identities=13% Similarity=0.457 Sum_probs=14.3
Q ss_pred eEEecCCCCCCeEEcc
Q 002043 814 SWIHSDIMDDNVYMEP 829 (976)
Q Consensus 814 v~iHgDl~~~NILv~~ 829 (976)
-++|+||+++||+++.
T Consensus 121 ~ivH~dlk~~Nili~~ 136 (314)
T cd08216 121 GFIHRSVKASHILLSG 136 (314)
T ss_pred CeecCCCCcceEEEec
Confidence 3799999999999975
No 343
>PRK13264 3-hydroxyanthranilate 3,4-dioxygenase; Provisional
Probab=92.60 E-value=0.51 Score=49.13 Aligned_cols=76 Identities=17% Similarity=0.219 Sum_probs=57.8
Q ss_pred cceEEeecCCCCCcccccCCCCcccEEEEEEEEEEEEeCCCCCCCcceeeecCCCCCccccCCcchhhhhhhCCCCCCCC
Q 002043 251 YRWVIIGPQRSGASWHVDPALTSAWNTLLCGRKRWALYPPGRVPLGVTVHVNEDDGDVNIETPSSLEWWLDFYPLLADDD 330 (976)
Q Consensus 251 ~rwL~iGp~gSgT~lH~Dp~~t~awn~qI~GrKrW~LfPP~~~p~~v~~~~~~~~s~vd~~~Pdsl~W~l~~yP~l~~~~ 330 (976)
+.-.++|.++..+.+|+++.+. |+.|+.|.=+..+...+
T Consensus 35 ~~VmvvgGpn~r~d~H~~~tdE--~FyqleG~~~l~v~d~g--------------------------------------- 73 (177)
T PRK13264 35 FIVMVVGGPNARTDFHYDPGEE--FFYQLEGDMYLKVQEDG--------------------------------------- 73 (177)
T ss_pred EEEEEEccCCcccccccCCCce--EEEEECCeEEEEEEcCC---------------------------------------
Confidence 4456788888889999988654 99999997444432211
Q ss_pred CCEEEEEcCCCEEEeCCCCceeeEecCCcEEEeeccc
Q 002043 331 KPIECTQLPGETIVVPSGWWHCILNLETTIAVTQNFV 367 (976)
Q Consensus 331 ~~~e~vL~PGDvLfVP~GWWH~V~NLd~SISVt~NFv 367 (976)
+...+++++||+++||+|-.|.....++|+.+-.--.
T Consensus 74 ~~~~v~L~eGd~fllP~gvpHsP~r~~~tv~LviE~~ 110 (177)
T PRK13264 74 KRRDVPIREGEMFLLPPHVPHSPQREAGSIGLVIERK 110 (177)
T ss_pred ceeeEEECCCCEEEeCCCCCcCCccCCCeEEEEEEeC
Confidence 2246789999999999999999999889988876433
No 344
>cd07834 STKc_MAPK Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and
Probab=92.54 E-value=0.53 Score=52.35 Aligned_cols=16 Identities=25% Similarity=0.497 Sum_probs=14.3
Q ss_pred eEEecCCCCCCeEEcc
Q 002043 814 SWIHSDIMDDNVYMEP 829 (976)
Q Consensus 814 v~iHgDl~~~NILv~~ 829 (976)
-++|+||+|+||+++.
T Consensus 123 gi~H~dlkp~nili~~ 138 (330)
T cd07834 123 NVIHRDLKPSNILVNS 138 (330)
T ss_pred CeecCCCCHHHEEEcC
Confidence 4799999999999975
No 345
>cd07860 STKc_CDK2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex
Probab=92.51 E-value=0.82 Score=49.42 Aligned_cols=17 Identities=18% Similarity=0.391 Sum_probs=14.9
Q ss_pred CeEEecCCCCCCeEEcc
Q 002043 813 CSWIHSDIMDDNVYMEP 829 (976)
Q Consensus 813 pv~iHgDl~~~NILv~~ 829 (976)
.-++|+||+|+||+++.
T Consensus 119 ~~i~H~~l~p~nill~~ 135 (284)
T cd07860 119 HRVLHRDLKPQNLLINT 135 (284)
T ss_pred CCeecCCCCHHHEEECC
Confidence 35799999999999975
No 346
>cd05091 PTKc_Ror2 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 2. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 2 (Ror2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly
Probab=92.49 E-value=0.78 Score=49.67 Aligned_cols=17 Identities=24% Similarity=0.311 Sum_probs=14.7
Q ss_pred CeEEecCCCCCCeEEcc
Q 002043 813 CSWIHSDIMDDNVYMEP 829 (976)
Q Consensus 813 pv~iHgDl~~~NILv~~ 829 (976)
.-++|+||+|.||++.+
T Consensus 143 ~gi~H~dlkp~Nil~~~ 159 (283)
T cd05091 143 HHVVHKDLATRNVLVFD 159 (283)
T ss_pred cCccccccchhheEecC
Confidence 34799999999999975
No 347
>PHA03207 serine/threonine kinase US3; Provisional
Probab=92.47 E-value=0.61 Score=53.88 Aligned_cols=16 Identities=25% Similarity=0.719 Sum_probs=14.3
Q ss_pred eEEecCCCCCCeEEcc
Q 002043 814 SWIHSDIMDDNVYMEP 829 (976)
Q Consensus 814 v~iHgDl~~~NILv~~ 829 (976)
-++|+||+|+|||++.
T Consensus 205 givHrDlkp~Nill~~ 220 (392)
T PHA03207 205 GIIHRDVKTENIFLDE 220 (392)
T ss_pred CccccCCCHHHEEEcC
Confidence 4699999999999975
No 348
>cd07866 STKc_BUR1 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins. Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic
Probab=92.39 E-value=0.95 Score=49.46 Aligned_cols=16 Identities=25% Similarity=0.511 Sum_probs=14.2
Q ss_pred eEEecCCCCCCeEEcc
Q 002043 814 SWIHSDIMDDNVYMEP 829 (976)
Q Consensus 814 v~iHgDl~~~NILv~~ 829 (976)
-++|+||+|+||+++.
T Consensus 135 ~i~H~dl~p~nil~~~ 150 (311)
T cd07866 135 HILHRDIKAANILIDN 150 (311)
T ss_pred CeecCCCCHHHEEECC
Confidence 4699999999999975
No 349
>KOG0281 consensus Beta-TrCP (transducin repeats containing)/Slimb proteins [Function unknown]
Probab=92.33 E-value=0.13 Score=57.77 Aligned_cols=50 Identities=20% Similarity=0.248 Sum_probs=46.5
Q ss_pred CCCCC----HHHHHHHHhcCCHHHHHHHHHHhHHHHHHccCchhHHHHHHhhcC
Q 002043 21 LKIIP----DEIICSILEHLTPRDVGRLACVSSVMYIFCNEEPLWMSLCLKKAS 70 (976)
Q Consensus 21 l~~LP----dEll~~Ils~L~~~dL~~L~~vsr~fy~~~~~d~LWr~~~~~~~~ 70 (976)
+..|| |++...||+||+..+|.+.-.||+.++....+..+||.+..+..-
T Consensus 75 i~~lP~~gl~hi~e~ilsyld~~sLc~celv~k~W~r~l~dg~~WKkLie~~vr 128 (499)
T KOG0281|consen 75 ITALPEQGLDHIAENILSYLDALSLCACELVCKEWKRVLSDGMLWKKLIERMVR 128 (499)
T ss_pred HHhcccccHHHHHHHHHHhcchhhhhHHHHHHHHHHHHhccchHHHHHHHHhcc
Confidence 34799 999999999999999999999999999999999999999999653
No 350
>cd05110 PTKc_HER4 Catalytic domain of the Protein Tyrosine Kinase, HER4. Protein Tyrosine Kinase (PTK) family; HER4 (ErbB4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER4 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as bindin
Probab=92.28 E-value=0.88 Score=50.19 Aligned_cols=16 Identities=25% Similarity=0.513 Sum_probs=14.2
Q ss_pred eEEecCCCCCCeEEcc
Q 002043 814 SWIHSDIMDDNVYMEP 829 (976)
Q Consensus 814 v~iHgDl~~~NILv~~ 829 (976)
-++|+||+|+||+++.
T Consensus 129 ~ivH~dikp~Nill~~ 144 (303)
T cd05110 129 RLVHRDLAARNVLVKS 144 (303)
T ss_pred CeeccccccceeeecC
Confidence 4699999999999965
No 351
>PF06560 GPI: Glucose-6-phosphate isomerase (GPI); InterPro: IPR010551 This entry consists of several bacterial and archaeal glucose-6-phosphate isomerase (GPI) proteins (5.3.1.9 from EC), which are involved in glycolysis and in gluconeogenesis and catalyse the conversion of D-glucose 6-phosphate to D-fructose 6-phosphate. The deduced amino acid sequence of the first archaeal PGI isolated from Pyrococcus furiosus revealed that it is not related to its eukaryotic and many of its bacterial counterparts. In contrast, this archaeal PGI shares similarity with the cupin superfamily that consists of a variety of proteins that are generally involved in sugar metabolism in both prokaryotes and eukaryotes [].; GO: 0004347 glucose-6-phosphate isomerase activity, 0006094 gluconeogenesis, 0006096 glycolysis, 0005737 cytoplasm; PDB: 1J3Q_B 1J3R_B 1J3P_A 2GC0_A 1X8E_A 1X82_A 1QY4_B 2GC2_B 1QXJ_A 1QXR_B ....
Probab=92.25 E-value=0.25 Score=51.78 Aligned_cols=39 Identities=23% Similarity=0.411 Sum_probs=27.1
Q ss_pred CCEEEEEcCCCEEEeCCCCceeeEecCCcEEEeecccCC
Q 002043 331 KPIECTQLPGETIVVPSGWWHCILNLETTIAVTQNFVDS 369 (976)
Q Consensus 331 ~~~e~vL~PGDvLfVP~GWWH~V~NLd~SISVt~NFv~~ 369 (976)
.++-+..+|||+++||++|-|.++|.++..=+..|+++.
T Consensus 108 ~~~~v~~~~G~~v~IPp~yaH~tIN~g~~~L~~~~~~~~ 146 (182)
T PF06560_consen 108 DVIAVEAKPGDVVYIPPGYAHRTINTGDEPLVFAAWVPR 146 (182)
T ss_dssp -EEEEEE-TTEEEEE-TT-EEEEEE-SSS-EEEEEEEET
T ss_pred eEEEEEeCCCCEEEECCCceEEEEECCCCcEEEEEEEec
Confidence 346778999999999999999999999876566666654
No 352
>PRK04190 glucose-6-phosphate isomerase; Provisional
Probab=92.22 E-value=0.63 Score=49.22 Aligned_cols=27 Identities=26% Similarity=0.345 Sum_probs=24.1
Q ss_pred EEEEEcCCCEEEeCCCCceeeEecCCc
Q 002043 333 IECTQLPGETIVVPSGWWHCILNLETT 359 (976)
Q Consensus 333 ~e~vL~PGDvLfVP~GWWH~V~NLd~S 359 (976)
.+..++|||++|||+||-|.+.|.++.
T Consensus 120 ~~~~v~pGd~v~IPpg~~H~~iN~G~e 146 (191)
T PRK04190 120 RWIEMEPGTVVYVPPYWAHRSVNTGDE 146 (191)
T ss_pred EEEEECCCCEEEECCCCcEEeEECCCC
Confidence 567799999999999999999998754
No 353
>cd05037 PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases. Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; pseudokinase domain (repeat1). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the ki
Probab=92.15 E-value=0.45 Score=50.39 Aligned_cols=16 Identities=13% Similarity=0.449 Sum_probs=14.3
Q ss_pred eEEecCCCCCCeEEcc
Q 002043 814 SWIHSDIMDDNVYMEP 829 (976)
Q Consensus 814 v~iHgDl~~~NILv~~ 829 (976)
-++|+||+|+||+++.
T Consensus 121 ~i~H~dlkp~Nill~~ 136 (259)
T cd05037 121 KLVHGNVCGKNILVAR 136 (259)
T ss_pred CeecccCccceEEEec
Confidence 3699999999999976
No 354
>cd07865 STKc_CDK9 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK9 together with a cyclin partner (cyclin T1, T2a, T2b, or K) is the main component of distinct positive transcription elongation factors (P-TEFb), which function as Ser2 C-terminal domain kinases of RNA polymerase II. P-TEFb participates in multipl
Probab=92.07 E-value=1.1 Score=48.90 Aligned_cols=16 Identities=19% Similarity=0.434 Sum_probs=14.0
Q ss_pred eEEecCCCCCCeEEcc
Q 002043 814 SWIHSDIMDDNVYMEP 829 (976)
Q Consensus 814 v~iHgDl~~~NILv~~ 829 (976)
-++|+||+|.||+++.
T Consensus 139 ~i~H~dl~p~nil~~~ 154 (310)
T cd07865 139 KILHRDMKAANILITK 154 (310)
T ss_pred CeeccCCCHHHEEECC
Confidence 3699999999999975
No 355
>cd07858 STKc_TEY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TEY Mitogen-Activated Protein Kinases from Plants. Serine/Threonine Kinases (STKs), Plant TEY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TEY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activati
Probab=91.97 E-value=0.93 Score=50.94 Aligned_cols=16 Identities=19% Similarity=0.468 Sum_probs=14.2
Q ss_pred eEEecCCCCCCeEEcc
Q 002043 814 SWIHSDIMDDNVYMEP 829 (976)
Q Consensus 814 v~iHgDl~~~NILv~~ 829 (976)
-++|+||+|.||+++.
T Consensus 128 ~i~H~dlkp~Nil~~~ 143 (337)
T cd07858 128 NVLHRDLKPSNLLLNA 143 (337)
T ss_pred CEecCCCCHHHEEEcC
Confidence 4799999999999975
No 356
>cd07849 STKc_ERK1_2_like Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Extracellular signal-regulated kinases 1 and 2 (ERK1/2) and Fus3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase
Probab=91.88 E-value=0.78 Score=51.45 Aligned_cols=16 Identities=19% Similarity=0.463 Sum_probs=14.1
Q ss_pred eEEecCCCCCCeEEcc
Q 002043 814 SWIHSDIMDDNVYMEP 829 (976)
Q Consensus 814 v~iHgDl~~~NILv~~ 829 (976)
-++|+||+|.||+++.
T Consensus 126 ~ivH~dlkp~Nill~~ 141 (336)
T cd07849 126 NVLHRDLKPSNLLLNT 141 (336)
T ss_pred CeeccCCCHHHEEECC
Confidence 3699999999999975
No 357
>TIGR01982 UbiB 2-polyprenylphenol 6-hydroxylase. This model represents the enzyme (UbiB) which catalyzes the first hydroxylation step in the ubiquinone biosynthetic pathway in bacteria. It is believed that the reaction is 2-polyprenylphenol - 6-hydroxy-2-polyprenylphenol. This model finds hits primarily in the proteobacteria. The gene is also known as AarF in certain species.
Probab=91.79 E-value=0.16 Score=60.11 Aligned_cols=61 Identities=11% Similarity=0.102 Sum_probs=42.1
Q ss_pred eEEecCCCCCCeEEccCCcccCCCCCCCCCCCccCCCCCCCCccCcCccceeeEEEeCCCCCCCCcc--cchhhhccccc
Q 002043 814 SWIHSDIMDDNVYMEPCCASSRSNGNAADTGPMVNGSINGYDEFGEAKSWHCSHIIDFSNLSIGDPI--YDVIPIHLDIF 891 (976)
Q Consensus 814 v~iHgDl~~~NILv~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~~~~~~w~~sGIIDFgd~~iGDP~--~Dlv~l~l~~f 891 (976)
-++|+|+||+||++.++ | + ..+||||-+..=++. ..++.+...+.
T Consensus 277 g~~H~D~hPgNilv~~~-------------------------g-------~-i~liDfG~~~~l~~~~r~~l~~l~~a~~ 323 (437)
T TIGR01982 277 GFFHADLHPGNIFVLKD-------------------------G-------K-IIALDFGIVGRLSEEDRRYLAEILYGFL 323 (437)
T ss_pred CceeCCCCcccEEECCC-------------------------C-------c-EEEEeCCCeeECCHHHHHHHHHHHHHHH
Confidence 46999999999999652 2 3 489999999776653 23344444566
Q ss_pred CCChHHHHHHHHhcCC
Q 002043 892 RGDSSLFKQFLESYKL 907 (976)
Q Consensus 892 ~gd~~l~~~fl~~Y~~ 907 (976)
.+|...+.+.+...+.
T Consensus 324 ~~D~~~l~~~l~~~g~ 339 (437)
T TIGR01982 324 NRDYRRVAEVHFDAGY 339 (437)
T ss_pred hcCHHHHHHHHHHcCC
Confidence 7777666666665553
No 358
>cd07857 STKc_MPK1 Catalytic domain of the Serine/Threonine Kinase, Fungal Mitogen-Activated Protein Kinase MPK1. Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) MPK1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MPK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs MPK1 from Saccharomyces cerevisiae, Pmk1 from Schizosaccharomyces pombe, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. MPK1 (also called Slt2) and Pmk1 (also called Spm1) are stress-activated MAPKs that regulate the cell wall integrity (CWI) pathway, and are therefore important in the maintainance of cell shape, cell wall co
Probab=91.74 E-value=0.91 Score=50.85 Aligned_cols=16 Identities=19% Similarity=0.434 Sum_probs=14.0
Q ss_pred eEEecCCCCCCeEEcc
Q 002043 814 SWIHSDIMDDNVYMEP 829 (976)
Q Consensus 814 v~iHgDl~~~NILv~~ 829 (976)
-++|+||+|+||+++.
T Consensus 125 givH~dlkp~Nili~~ 140 (332)
T cd07857 125 NVLHRDLKPGNLLVNA 140 (332)
T ss_pred CcccCCCCHHHeEEcC
Confidence 3699999999999975
No 359
>cd07830 STKc_MAK_like Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertili
Probab=91.64 E-value=0.92 Score=48.92 Aligned_cols=16 Identities=19% Similarity=0.515 Sum_probs=14.4
Q ss_pred eEEecCCCCCCeEEcc
Q 002043 814 SWIHSDIMDDNVYMEP 829 (976)
Q Consensus 814 v~iHgDl~~~NILv~~ 829 (976)
-++|+||+++||++++
T Consensus 119 ~i~H~dl~~~ni~i~~ 134 (283)
T cd07830 119 GFFHRDLKPENLLVSG 134 (283)
T ss_pred CcccCCCChhhEEEcC
Confidence 4699999999999976
No 360
>KOG0605 consensus NDR and related serine/threonine kinases [General function prediction only]
Probab=91.54 E-value=0.34 Score=57.64 Aligned_cols=47 Identities=30% Similarity=0.317 Sum_probs=28.3
Q ss_pred ccc-ccCCC-CcceEEec------ceEEEEee--cCCcccccccchhHHHHHHHHHhhCC
Q 002043 540 EKL-PVGNG-SNPVYLMA------DCVVKIFV--EGGFESSIYGLGTELEFYSLLAKVNS 589 (976)
Q Consensus 540 ~~~-~~~~g-s~pv~~v~------~~v~K~~~--~~~~~~s~~~~~~e~~~y~~l~~~~~ 589 (976)
+-| ++|-| .--||++- =+.+|+-. +--.........+|.. +|+.++|
T Consensus 144 e~Lk~IgkGAfGeVrLarKk~Tg~iyAmK~LkKS~M~~~~Qv~hV~aERd---iL~~~ds 200 (550)
T KOG0605|consen 144 ELLKVIGKGAFGEVRLARKKDTGEIYAMKILKKSEMLKKNQVEHVRAERD---ILAEVDS 200 (550)
T ss_pred hhheeeccccceeEEEEEEccCCcEEeeecccHHHHHhhhhHHHHHHHHH---HhhhcCC
Confidence 444 77776 88899997 36778877 2211112223556665 6666666
No 361
>PF07883 Cupin_2: Cupin domain; InterPro: IPR013096 This family represents the conserved barrel domain of the cupin superfamily [] (cupa is the Latin term for a small barrel). ; PDB: 2OPK_C 3BU7_B 2PHD_D 3NVC_A 3NKT_A 3NJZ_A 3NW4_A 3NST_A 3NL1_A 2H0V_A ....
Probab=91.45 E-value=0.55 Score=40.33 Aligned_cols=58 Identities=21% Similarity=0.295 Sum_probs=44.1
Q ss_pred cCCCCCcccccCCCCcccEEEEEEEEEEEEeCCCCCCCcceeeecCCCCCccccCCcchhhhhhhCCCCCCCCCCEEEEE
Q 002043 258 PQRSGASWHVDPALTSAWNTLLCGRKRWALYPPGRVPLGVTVHVNEDDGDVNIETPSSLEWWLDFYPLLADDDKPIECTQ 337 (976)
Q Consensus 258 p~gSgT~lH~Dp~~t~awn~qI~GrKrW~LfPP~~~p~~v~~~~~~~~s~vd~~~Pdsl~W~l~~yP~l~~~~~~~e~vL 337 (976)
++|...+.|.++.. .-+..++.|+-...+ . .-...+
T Consensus 6 ~pG~~~~~h~H~~~-~e~~~vl~G~~~~~~-~------------------------------------------~~~~~l 41 (71)
T PF07883_consen 6 PPGGSIPPHRHPGE-DEFFYVLSGEGTLTV-D------------------------------------------GERVEL 41 (71)
T ss_dssp ETTEEEEEEEESSE-EEEEEEEESEEEEEE-T------------------------------------------TEEEEE
T ss_pred CCCCCCCCEECCCC-CEEEEEEECCEEEEE-c------------------------------------------cEEeEc
Confidence 45667889998764 258888988755542 0 025668
Q ss_pred cCCCEEEeCCCCceeeEecCCc
Q 002043 338 LPGETIVVPSGWWHCILNLETT 359 (976)
Q Consensus 338 ~PGDvLfVP~GWWH~V~NLd~S 359 (976)
+|||+++||++-+|.+.|..+.
T Consensus 42 ~~Gd~~~i~~~~~H~~~n~~~~ 63 (71)
T PF07883_consen 42 KPGDAIYIPPGVPHQVRNPGDE 63 (71)
T ss_dssp ETTEEEEEETTSEEEEEEESSS
T ss_pred cCCEEEEECCCCeEEEEECCCC
Confidence 9999999999999999998764
No 362
>cd05074 PTKc_Tyro3 Catalytic domain of the Protein Tyrosine Kinase, Tyro3. Protein Tyrosine Kinase (PTK) family; Tyro3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyro3 (or Sky) is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Tyro3 is predominantly expressed in the central nervous system and the brain, and functions as a neurotrophic fac
Probab=91.42 E-value=1.7 Score=46.64 Aligned_cols=16 Identities=25% Similarity=0.569 Sum_probs=14.4
Q ss_pred eEEecCCCCCCeEEcc
Q 002043 814 SWIHSDIMDDNVYMEP 829 (976)
Q Consensus 814 v~iHgDl~~~NILv~~ 829 (976)
-++|+||+|.||+++.
T Consensus 133 ~i~H~dikp~nili~~ 148 (273)
T cd05074 133 NFIHRDLAARNCMLNE 148 (273)
T ss_pred CEeecccchhhEEEcC
Confidence 4899999999999965
No 363
>cd07877 STKc_p38alpha_MAPK14 Catalytic domain of the Serine/Threonine Kinase, p38alpha Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38alpha subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38alpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38alpha, also called MAPK14
Probab=91.30 E-value=1.2 Score=50.44 Aligned_cols=16 Identities=25% Similarity=0.414 Sum_probs=14.2
Q ss_pred eEEecCCCCCCeEEcc
Q 002043 814 SWIHSDIMDDNVYMEP 829 (976)
Q Consensus 814 v~iHgDl~~~NILv~~ 829 (976)
-++|+||+|.||+++.
T Consensus 140 ~ivH~dlkp~NIll~~ 155 (345)
T cd07877 140 DIIHRDLKPSNLAVNE 155 (345)
T ss_pred CeeecCCChHHEEEcC
Confidence 3699999999999975
No 364
>cd07864 STKc_CDK12 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 12 (CDK12) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 is widely
Probab=91.28 E-value=1.3 Score=48.22 Aligned_cols=16 Identities=25% Similarity=0.571 Sum_probs=14.3
Q ss_pred eEEecCCCCCCeEEcc
Q 002043 814 SWIHSDIMDDNVYMEP 829 (976)
Q Consensus 814 v~iHgDl~~~NILv~~ 829 (976)
-++|+||+|.||+++.
T Consensus 136 ~i~H~dl~p~nili~~ 151 (302)
T cd07864 136 NFLHRDIKCSNILLNN 151 (302)
T ss_pred CeecCCCCHHHEEECC
Confidence 4799999999999975
No 365
>KOG0581 consensus Mitogen-activated protein kinase kinase (MAP2K) [Signal transduction mechanisms]
Probab=91.21 E-value=0.31 Score=55.60 Aligned_cols=18 Identities=28% Similarity=0.390 Sum_probs=15.8
Q ss_pred CCeEEecCCCCCCeEEcc
Q 002043 812 PCSWIHSDIMDDNVYMEP 829 (976)
Q Consensus 812 ~pv~iHgDl~~~NILv~~ 829 (976)
..-+||+|++|.||||+.
T Consensus 197 ~~~IIHRDIKPsNlLvNs 214 (364)
T KOG0581|consen 197 ERKIIHRDIKPSNLLVNS 214 (364)
T ss_pred ccCeeeccCCHHHeeecc
Confidence 367799999999999975
No 366
>KOG4250 consensus TANK binding protein kinase TBK1 [Signal transduction mechanisms]
Probab=91.21 E-value=0.67 Score=56.85 Aligned_cols=47 Identities=15% Similarity=0.100 Sum_probs=34.8
Q ss_pred CCeEEecCCCCCCeEEccCCcccCCCCCCCCCCCccCCCCCCCCccCcCccceeeEEEeCCCCCCCCcccchhhhc
Q 002043 812 PCSWIHSDIMDDNVYMEPCCASSRSNGNAADTGPMVNGSINGYDEFGEAKSWHCSHIIDFSNLSIGDPIYDVIPIH 887 (976)
Q Consensus 812 ~pv~iHgDl~~~NILv~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~~~~~~w~~sGIIDFgd~~iGDP~~Dlv~l~ 887 (976)
+.-++|.||+|+||+.-++ .|| -.+--|+|||.+.==|=--.|++++
T Consensus 138 En~IvHRDlKP~NIvl~~G-----------------------edg------q~IyKLtDfG~Arel~d~s~~~S~v 184 (732)
T KOG4250|consen 138 ENGIVHRDLKPGNIVLQIG-----------------------EDG------QSIYKLTDFGAARELDDNSLFTSLV 184 (732)
T ss_pred HcCceeccCCCCcEEEeec-----------------------CCC------ceEEeeecccccccCCCCCeeeeec
Confidence 4667999999999999763 233 2577899999987655555666654
No 367
>PRK14705 glycogen branching enzyme; Provisional
Probab=90.97 E-value=1.7 Score=57.38 Aligned_cols=47 Identities=26% Similarity=0.415 Sum_probs=35.7
Q ss_pred CCCCcceEEec----ceEEEEee--cCCcccccccchhHHHHHHHHHhhCCCCCcccccceec
Q 002043 545 GNGSNPVYLMA----DCVVKIFV--EGGFESSIYGLGTELEFYSLLAKVNSPLKNYIPDVLAS 601 (976)
Q Consensus 545 ~~gs~pv~~v~----~~v~K~~~--~~~~~~s~~~~~~e~~~y~~l~~~~~~l~~~~P~~~~~ 601 (976)
+.-||.-.+++ .+|||+|= +.|.- -|+|.-+.|.+++. .+||.++++
T Consensus 154 ~EQSNTSvi~gd~~~~~ilKlfRrl~~G~N-------PdvE~~r~Lteag~---~~vP~llG~ 206 (1224)
T PRK14705 154 GEQSNTSVIVDDGDSAAIVKFFRVLSAGKN-------PEVELGAALTAAGT---SEVPATLGW 206 (1224)
T ss_pred cccCceEEEECCCCccEEEEEeeecCCCCC-------ccHHHHHHHhhCCC---ccCCCccEE
Confidence 44599999987 48999998 33433 56777778887666 899999977
No 368
>COG3570 StrB Streptomycin 6-kinase [Defense mechanisms]
Probab=90.94 E-value=0.8 Score=48.99 Aligned_cols=82 Identities=22% Similarity=0.289 Sum_probs=50.0
Q ss_pred CCCeEEecCCCCCCeEEccCCcccCCCCCCCCCCCccCCCCCCCCccCcCccceeeEEEeCCCCCCCCcccchhhhcccc
Q 002043 811 KPCSWIHSDIMDDNVYMEPCCASSRSNGNAADTGPMVNGSINGYDEFGEAKSWHCSHIIDFSNLSIGDPIYDVIPIHLDI 890 (976)
Q Consensus 811 ~~pv~iHgDl~~~NILv~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~~~~~~w~~sGIIDFgd~~iGDP~~Dlv~l~l~~ 890 (976)
..+.=+|||||-+|||=-+ .+.|- ||| =---+|||-||.+-+....
T Consensus 159 ~di~pLHGDlHH~Nild~~------------------------------~rGWl---vID-Pkgl~Gdrg~D~ANlf~Np 204 (274)
T COG3570 159 RDIRPLHGDLHHGNILDGD------------------------------RRGWL---VID-PKGLIGDRGFDYANLFCNP 204 (274)
T ss_pred cccccCcccccccccccCC------------------------------cCceE---EEc-cccccCccccchHhhhcCC
Confidence 5667799999999998632 13574 477 3345799999998764321
Q ss_pred ---cCCChHHHHHHHHhcCCccccccccCCCCCCchhhHHHHHHHHhhh
Q 002043 891 ---FRGDSSLFKQFLESYKLPLVRRMQQHGSGGGKFSRLSYHAMCYCIL 936 (976)
Q Consensus 891 ---f~gd~~l~~~fl~~Y~~~~~~~~~~~~~~~~~~~~~~~r~m~y~il 936 (976)
..-++.++...++-..-.. ...++++...+|+|+-|
T Consensus 205 ~~~~~~~pgRi~rqlai~a~a~----------~l~p~rLlqw~~Ay~gL 243 (274)
T COG3570 205 LDDLALAPGRIARQLAIFAHAL----------GLDPRRLLQWAIAYGGL 243 (274)
T ss_pred chhhhhChHHHHHHHHHHHHHh----------ccCHHHHHHHHHHHhhh
Confidence 1122333333333222221 22347899999999876
No 369
>cd07856 STKc_Sty1_Hog1 Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1. Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and U
Probab=90.84 E-value=1.2 Score=49.99 Aligned_cols=16 Identities=19% Similarity=0.468 Sum_probs=14.0
Q ss_pred eEEecCCCCCCeEEcc
Q 002043 814 SWIHSDIMDDNVYMEP 829 (976)
Q Consensus 814 v~iHgDl~~~NILv~~ 829 (976)
-++|+||+|.||+++.
T Consensus 128 ~iiH~dl~p~Nili~~ 143 (328)
T cd07856 128 GVVHRDLKPSNILINE 143 (328)
T ss_pred CcccCCCCHHHEeECC
Confidence 4789999999999975
No 370
>KOG2686 consensus Choline kinase [Cell wall/membrane/envelope biogenesis]
Probab=90.84 E-value=1.5 Score=50.45 Aligned_cols=44 Identities=20% Similarity=0.289 Sum_probs=36.4
Q ss_pred CCCCeEEecCCCCCCeEEccCCcccCCCCCCCCCCCccCCCCCCCCccCcCccceeeEEEeCCCCCCCCcccchhh
Q 002043 810 CKPCSWIHSDIMDDNVYMEPCCASSRSNGNAADTGPMVNGSINGYDEFGEAKSWHCSHIIDFSNLSIGDPIYDVIP 885 (976)
Q Consensus 810 ~~~pv~iHgDl~~~NILv~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~~~~~~w~~sGIIDFgd~~iGDP~~Dlv~ 885 (976)
..+-||.|.|+..+|||+..++ .-.-||||+-+++--..||++.
T Consensus 209 ~~~vvFcHNDlq~gNiL~~~~t--------------------------------~~Lv~IDfEYasyN~r~fDlan 252 (366)
T KOG2686|consen 209 KSPVVFCHNDLQYGNILLLNST--------------------------------KELVLIDFEYASYNPRGFDLAN 252 (366)
T ss_pred CCCeeeecccccccceeeecCC--------------------------------CceeEEeeccccCCchhhhHHH
Confidence 3578999999999999997532 1337999999999999999953
No 371
>PLN00009 cyclin-dependent kinase A; Provisional
Probab=90.84 E-value=1.8 Score=47.25 Aligned_cols=16 Identities=19% Similarity=0.459 Sum_probs=14.4
Q ss_pred eEEecCCCCCCeEEcc
Q 002043 814 SWIHSDIMDDNVYMEP 829 (976)
Q Consensus 814 v~iHgDl~~~NILv~~ 829 (976)
-++|+||+|.||+++.
T Consensus 122 ~i~H~dl~p~nill~~ 137 (294)
T PLN00009 122 RVLHRDLKPQNLLIDR 137 (294)
T ss_pred CeeCCCCCcceEEEEC
Confidence 4799999999999975
No 372
>cd06616 PKc_MKK4 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 4. Protein kinases (PKs), MAP kinase kinase 4 (MKK4) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK4 is a dual-specificity PK that phosphorylates and activates
Probab=90.81 E-value=1.3 Score=47.98 Aligned_cols=17 Identities=24% Similarity=0.477 Sum_probs=14.8
Q ss_pred CeEEecCCCCCCeEEcc
Q 002043 813 CSWIHSDIMDDNVYMEP 829 (976)
Q Consensus 813 pv~iHgDl~~~NILv~~ 829 (976)
.-++|+||+|.||+++.
T Consensus 127 ~~i~H~dlkp~Nil~~~ 143 (288)
T cd06616 127 LKIIHRDVKPSNILLDR 143 (288)
T ss_pred CCeeccCCCHHHEEEcc
Confidence 35899999999999975
No 373
>PTZ00283 serine/threonine protein kinase; Provisional
Probab=90.81 E-value=0.47 Score=57.06 Aligned_cols=17 Identities=29% Similarity=0.401 Sum_probs=14.8
Q ss_pred CeEEecCCCCCCeEEcc
Q 002043 813 CSWIHSDIMDDNVYMEP 829 (976)
Q Consensus 813 pv~iHgDl~~~NILv~~ 829 (976)
.-++|+||+|+|||++.
T Consensus 162 ~~IiHrDLKP~NILl~~ 178 (496)
T PTZ00283 162 KHMIHRDIKSANILLCS 178 (496)
T ss_pred CCEecCCCCHHHEEEeC
Confidence 34799999999999975
No 374
>PRK10345 hypothetical protein; Provisional
Probab=90.76 E-value=2.8 Score=44.93 Aligned_cols=56 Identities=23% Similarity=0.333 Sum_probs=32.6
Q ss_pred ccccCCC-CcceEEec----ceEEEEeecCCcccccccchhHHHHHHHHHhhCCCCCcccccce
Q 002043 541 KLPVGNG-SNPVYLMA----DCVVKIFVEGGFESSIYGLGTELEFYSLLAKVNSPLKNYIPDVL 599 (976)
Q Consensus 541 ~~~~~~g-s~pv~~v~----~~v~K~~~~~~~~~s~~~~~~e~~~y~~l~~~~~~l~~~~P~~~ 599 (976)
..++|.| +.-||. . ..+||+....... ...-+..|+..|..|.+ .+.-..+||++.
T Consensus 7 ~~~LG~G~~~~Vy~-hp~~~~k~IKv~~~~~~~-~~~~~~rEi~~l~~L~~-~~~~h~nIvr~y 67 (210)
T PRK10345 7 QSPLGTGRHRKCYA-HPEDAQRCIKIVYHRGDG-GDKEIRRELKYYAHLSR-RLIDWSGIPRYY 67 (210)
T ss_pred cceecCCCceEEEE-CCCCcCeEEEEEeccccc-hHHHHHHHHHHHHHhhc-cCCCCcccceee
Confidence 4466887 566775 5 5688887632111 12336799999888854 222233455544
No 375
>cd06639 STKc_myosinIIIB Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIB myosin. Serine/threonine kinases (STKs), class IIIB myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. Class IIIB myosin is expressed highly in retina. It is also pre
Probab=90.65 E-value=0.58 Score=50.94 Aligned_cols=17 Identities=24% Similarity=0.479 Sum_probs=14.9
Q ss_pred CeEEecCCCCCCeEEcc
Q 002043 813 CSWIHSDIMDDNVYMEP 829 (976)
Q Consensus 813 pv~iHgDl~~~NILv~~ 829 (976)
.-++|+||+|+||+++.
T Consensus 147 ~~ivH~dlkp~nili~~ 163 (291)
T cd06639 147 NRIIHRDVKGNNILLTT 163 (291)
T ss_pred CCeeccCCCHHHEEEcC
Confidence 35799999999999975
No 376
>cd07852 STKc_MAPK15 Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimul
Probab=90.54 E-value=2 Score=48.15 Aligned_cols=16 Identities=25% Similarity=0.522 Sum_probs=14.3
Q ss_pred eEEecCCCCCCeEEcc
Q 002043 814 SWIHSDIMDDNVYMEP 829 (976)
Q Consensus 814 v~iHgDl~~~NILv~~ 829 (976)
-++|+||+|.||+++.
T Consensus 127 ~i~H~dl~p~nill~~ 142 (337)
T cd07852 127 NVIHRDLKPSNILLNS 142 (337)
T ss_pred CeecCCCCHHHEEEcC
Confidence 4699999999999975
No 377
>cd06617 PKc_MKK3_6 Catalytic domain of the dual-specificity Protein Kinases, MAP kinase kinases 3 and 6. Protein kinases (PKs), MAP kinase kinase 3 (MKK3) and MKK6 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK3 and MKK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK3 and MKK6 are dual-specificity PKs
Probab=90.21 E-value=1.7 Score=46.82 Aligned_cols=17 Identities=35% Similarity=0.468 Sum_probs=14.8
Q ss_pred CeEEecCCCCCCeEEcc
Q 002043 813 CSWIHSDIMDDNVYMEP 829 (976)
Q Consensus 813 pv~iHgDl~~~NILv~~ 829 (976)
+-++|+||+|+||++++
T Consensus 123 ~~i~h~dlkp~nil~~~ 139 (283)
T cd06617 123 LSVIHRDVKPSNVLINR 139 (283)
T ss_pred CCeecCCCCHHHEEECC
Confidence 35799999999999975
No 378
>cd08528 STKc_Nek10 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 10. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 10 (Nek10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek10 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. No function has yet been ascribed to Nek10. The gene encoding Nek10 is a putative causative gene for breast cancer; it is located within a breast cancer susceptibility loci on chromosome 3p24.
Probab=90.19 E-value=0.78 Score=49.18 Aligned_cols=17 Identities=18% Similarity=0.294 Sum_probs=14.6
Q ss_pred ccEEEEecccCccchhh
Q 002043 672 WPYIITKRCKGKMFAQL 688 (976)
Q Consensus 672 WpYiVm~rl~G~~l~~v 688 (976)
-+|+||++++|.++.+.
T Consensus 83 ~~~lv~e~~~~~~l~~~ 99 (269)
T cd08528 83 RLYIVMDLIEGAPLGEH 99 (269)
T ss_pred eEEEEEecCCCCcHHHH
Confidence 47999999999988764
No 379
>cd07851 STKc_p38 Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK
Probab=89.92 E-value=1.1 Score=50.41 Aligned_cols=16 Identities=25% Similarity=0.439 Sum_probs=14.0
Q ss_pred eEEecCCCCCCeEEcc
Q 002043 814 SWIHSDIMDDNVYMEP 829 (976)
Q Consensus 814 v~iHgDl~~~NILv~~ 829 (976)
-++|+|++|.||++++
T Consensus 138 gi~H~dlkp~Nill~~ 153 (343)
T cd07851 138 GIIHRDLKPSNIAVNE 153 (343)
T ss_pred CeecCCCCHHHeEECC
Confidence 3699999999999975
No 380
>KOG3926 consensus F-box proteins [Amino acid transport and metabolism]
Probab=89.79 E-value=0.29 Score=53.60 Aligned_cols=66 Identities=26% Similarity=0.404 Sum_probs=54.8
Q ss_pred CCCCCCHHHHHHHHhcC-CHHHHHHHHHHhHHHHHHccCchhHHHHHHhhcCCc-------ee--ecCccceeecc
Q 002043 20 DLKIIPDEIICSILEHL-TPRDVGRLACVSSVMYIFCNEEPLWMSLCLKKASGV-------LQ--YKGSWKKTALH 85 (976)
Q Consensus 20 ~l~~LPdEll~~Ils~L-~~~dL~~L~~vsr~fy~~~~~d~LWr~~~~~~~~~~-------~~--~~gSWr~tyl~ 85 (976)
.|..||-|+++.|+-.| |-+||..+|++--.++.+.++..|||.+|.=.++.. +. -+-.||.+|..
T Consensus 201 tl~dLP~e~vl~Il~rlsDh~dL~s~aqa~etl~~l~~e~~iWkkLcqfHF~erQi~~~l~l~k~~q~dWkqmyf~ 276 (332)
T KOG3926|consen 201 TLHDLPLECVLNILLRLSDHRDLESLAQAWETLAKLSEERRIWKKLCQFHFNERQIHTILILSKKGQKDWKQMYFQ 276 (332)
T ss_pred CcccchHHHHHHHHHHccCcchHHHHHHhhHHHHHHHHHHHHHHHHHHHHhhHHHHHHhhhhccccchhHHHHHHH
Confidence 57789999999999877 579999999999999999999999999998766421 11 11359999987
No 381
>PRK04750 ubiB putative ubiquinone biosynthesis protein UbiB; Reviewed
Probab=89.64 E-value=0.27 Score=59.68 Aligned_cols=64 Identities=13% Similarity=0.106 Sum_probs=41.7
Q ss_pred eEEecCCCCCCeEEccCCcccCCCCCCCCCCCccCCCCCCCCccCcCccceeeEEEeCCCCCCCCcc--cchhhhccccc
Q 002043 814 SWIHSDIMDDNVYMEPCCASSRSNGNAADTGPMVNGSINGYDEFGEAKSWHCSHIIDFSNLSIGDPI--YDVIPIHLDIF 891 (976)
Q Consensus 814 v~iHgDl~~~NILv~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~~~~~~w~~sGIIDFgd~~iGDP~--~Dlv~l~l~~f 891 (976)
-|+|+|+|||||+|++++ ..+ .++ .+||||-++.=++. .-|+-+++.++
T Consensus 280 GffHaDpHPGNIlv~~~g---------------------~~~-------~~i-~llDFGivg~l~~~~r~~l~~~~~a~~ 330 (537)
T PRK04750 280 GFFHADMHPGNIFVSYDP---------------------PEN-------PRY-IALDFGIVGSLNKEDKRYLAENFLAFF 330 (537)
T ss_pred CeeeCCCChHHeEEecCC---------------------CCC-------CeE-EEEecceEEECCHHHHHHHHHHHHHHH
Confidence 579999999999997632 001 134 78999998876653 22444555677
Q ss_pred CCChHHHHHHHHhcC
Q 002043 892 RGDSSLFKQFLESYK 906 (976)
Q Consensus 892 ~gd~~l~~~fl~~Y~ 906 (976)
.+|...+-+.+..-|
T Consensus 331 ~~D~~~v~~~~~~~g 345 (537)
T PRK04750 331 NRDYRRVAELHVESG 345 (537)
T ss_pred hcCHHHHHHHHHHhC
Confidence 888765554444333
No 382
>cd06634 STKc_TAO2 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 2. Serine/threonine kinases (STKs), thousand-and-one amino acids 2 (TAO2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activatin
Probab=89.52 E-value=2.2 Score=47.27 Aligned_cols=17 Identities=24% Similarity=0.472 Sum_probs=14.6
Q ss_pred CeEEecCCCCCCeEEcc
Q 002043 813 CSWIHSDIMDDNVYMEP 829 (976)
Q Consensus 813 pv~iHgDl~~~NILv~~ 829 (976)
..++|+||+|.||+++.
T Consensus 134 ~~i~H~dl~p~nil~~~ 150 (308)
T cd06634 134 HNMIHRDVKAGNILLSE 150 (308)
T ss_pred CCcccCCCCHHhEEECC
Confidence 34699999999999965
No 383
>cd06630 STKc_MEKK1 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their
Probab=89.38 E-value=0.89 Score=48.53 Aligned_cols=18 Identities=11% Similarity=0.091 Sum_probs=15.0
Q ss_pred CccEEEEecccCccchhh
Q 002043 671 IWPYIITKRCKGKMFAQL 688 (976)
Q Consensus 671 ~WpYiVm~rl~G~~l~~v 688 (976)
...|+||++++|.+|.+.
T Consensus 76 ~~~~~v~e~~~~~~L~~~ 93 (268)
T cd06630 76 SHFNLFVEWMAGGSVSHL 93 (268)
T ss_pred CeEEEEEeccCCCcHHHH
Confidence 468999999999888763
No 384
>cd07879 STKc_p38delta_MAPK13 Catalytic domain of the Serine/Threonine Kinase, p38delta Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38delta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38delta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38delta, also called MAPK13
Probab=89.20 E-value=2.6 Score=47.57 Aligned_cols=16 Identities=25% Similarity=0.403 Sum_probs=14.0
Q ss_pred eEEecCCCCCCeEEcc
Q 002043 814 SWIHSDIMDDNVYMEP 829 (976)
Q Consensus 814 v~iHgDl~~~NILv~~ 829 (976)
.++|+||+|.||+++.
T Consensus 137 ~i~H~dlkp~NIll~~ 152 (342)
T cd07879 137 GIIHRDLKPGNLAVNE 152 (342)
T ss_pred CcccCCCCHHHEEECC
Confidence 3689999999999975
No 385
>cd07854 STKc_MAPK4_6 Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 and 6. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 4 (MAPK4) and MAPK6 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK4/6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. MAPK4 is also called ERK4 or p63MAPK, while MAPK6 is also called ERK3 or p97MAPK. MAPK4 and MAPK6 are atypical MAPKs that are not regulated by MAP2Ks. MAPK6 is expressed ubiquitously with highest amounts in brain and skeletal muscle. It may be involved in the control of cell differentiation by negatively regulating cell cycle progressi
Probab=89.19 E-value=1.9 Score=48.60 Aligned_cols=16 Identities=25% Similarity=0.580 Sum_probs=13.9
Q ss_pred eEEecCCCCCCeEEcc
Q 002043 814 SWIHSDIMDDNVYMEP 829 (976)
Q Consensus 814 v~iHgDl~~~NILv~~ 829 (976)
-++|+||+++||+++.
T Consensus 134 givH~dikp~Nili~~ 149 (342)
T cd07854 134 NVLHRDLKPANVFINT 149 (342)
T ss_pred CcccCCCCHHHEEEcC
Confidence 3689999999999964
No 386
>KOG0616 consensus cAMP-dependent protein kinase catalytic subunit (PKA) [Signal transduction mechanisms]
Probab=89.08 E-value=0.8 Score=51.28 Aligned_cols=19 Identities=16% Similarity=0.289 Sum_probs=16.0
Q ss_pred CCeEEecCCCCCCeEEccC
Q 002043 812 PCSWIHSDIMDDNVYMEPC 830 (976)
Q Consensus 812 ~pv~iHgDl~~~NILv~~~ 830 (976)
..-+|+.||+|+|||++..
T Consensus 162 ~~~iiYRDLKPENiLlD~~ 180 (355)
T KOG0616|consen 162 SLDIIYRDLKPENLLLDQN 180 (355)
T ss_pred hcCeeeccCChHHeeeccC
Confidence 3567999999999999863
No 387
>KOG0667 consensus Dual-specificity tyrosine-phosphorylation regulated kinase [General function prediction only]
Probab=88.70 E-value=0.46 Score=57.58 Aligned_cols=36 Identities=19% Similarity=0.305 Sum_probs=27.9
Q ss_pred CCCeEEecCCCCCCeEEccCCcccCCCCCCCCCCCccCCCCCCCCccCcCccceeeEEEeCCCCCCC
Q 002043 811 KPCSWIHSDIMDDNVYMEPCCASSRSNGNAADTGPMVNGSINGYDEFGEAKSWHCSHIIDFSNLSIG 877 (976)
Q Consensus 811 ~~pv~iHgDl~~~NILv~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~~~~~~w~~sGIIDFgd~~iG 877 (976)
..--+||+||+|+|||+.... -.-+-|||||-+.+=
T Consensus 306 ~~l~IIHcDLKPENILL~~~~-------------------------------r~~vKVIDFGSSc~~ 341 (586)
T KOG0667|consen 306 HELGIIHCDLKPENILLKDPK-------------------------------RSRIKVIDFGSSCFE 341 (586)
T ss_pred HhCCeeeccCChhheeeccCC-------------------------------cCceeEEeccccccc
Confidence 356899999999999996532 124589999998874
No 388
>KOG0198 consensus MEKK and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=88.70 E-value=1.2 Score=50.58 Aligned_cols=17 Identities=29% Similarity=0.614 Sum_probs=15.1
Q ss_pred CeEEecCCCCCCeEEcc
Q 002043 813 CSWIHSDIMDDNVYMEP 829 (976)
Q Consensus 813 pv~iHgDl~~~NILv~~ 829 (976)
.-+||+||+++|||+++
T Consensus 136 ~g~vH~DiK~~NiLl~~ 152 (313)
T KOG0198|consen 136 KGIVHCDIKPANILLDP 152 (313)
T ss_pred CCEeccCcccceEEEeC
Confidence 45699999999999987
No 389
>cd05583 STKc_MSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines
Probab=88.68 E-value=1 Score=48.94 Aligned_cols=16 Identities=25% Similarity=0.397 Sum_probs=14.3
Q ss_pred eEEecCCCCCCeEEcc
Q 002043 814 SWIHSDIMDDNVYMEP 829 (976)
Q Consensus 814 v~iHgDl~~~NILv~~ 829 (976)
-++|+||+|.||+++.
T Consensus 125 ~~~H~dl~p~nil~~~ 140 (288)
T cd05583 125 GIIYRDIKLENILLDS 140 (288)
T ss_pred CeeccCCCHHHeEECC
Confidence 4799999999999975
No 390
>cd06648 STKc_PAK_II Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs foun
Probab=88.58 E-value=1.1 Score=49.04 Aligned_cols=16 Identities=31% Similarity=0.567 Sum_probs=14.0
Q ss_pred eEEecCCCCCCeEEcc
Q 002043 814 SWIHSDIMDDNVYMEP 829 (976)
Q Consensus 814 v~iHgDl~~~NILv~~ 829 (976)
-++|+||+|.||+++.
T Consensus 135 ~i~H~dl~p~Nil~~~ 150 (285)
T cd06648 135 GVIHRDIKSDSILLTS 150 (285)
T ss_pred CeecCCCChhhEEEcC
Confidence 4689999999999975
No 391
>KOG0593 consensus Predicted protein kinase KKIAMRE [General function prediction only]
Probab=88.37 E-value=0.67 Score=52.02 Aligned_cols=78 Identities=22% Similarity=0.458 Sum_probs=51.5
Q ss_pred HHHHHHhhhcCCCCCHHHHHHHhhhCChhHHHHhhhhhhccCCccCCCCCeEEecCCCCCCeEEccCCcccCCCCCCCCC
Q 002043 764 KNLVNRLTAWGHPIPKALIDKVDEYIPDDFVKLLDIYQDENGLNKVCKPCSWIHSDIMDDNVYMEPCCASSRSNGNAADT 843 (976)
Q Consensus 764 ~~~~~~~~~wg~~lp~~l~e~l~~ylp~d~~~ll~~~~~e~~~~~~~~~pv~iHgDl~~~NILv~~~~~~~~~~~~~~~~ 843 (976)
..++..++++-.++|.+++. .|+ .+++... ..+..--.||.|++|+|||+...
T Consensus 85 hTvL~eLe~~p~G~~~~~vk---~~l----~Q~l~ai-------~~cHk~n~IHRDIKPENILit~~------------- 137 (396)
T KOG0593|consen 85 HTVLHELERYPNGVPSELVK---KYL----YQLLKAI-------HFCHKNNCIHRDIKPENILITQN------------- 137 (396)
T ss_pred hHHHHHHHhccCCCCHHHHH---HHH----HHHHHHh-------hhhhhcCeecccCChhheEEecC-------------
Confidence 35566666665688877544 344 1222211 01344457999999999999763
Q ss_pred CCccCCCCCCCCccCcCccceeeEEEeCCCCCC----CCcccchhhhcc
Q 002043 844 GPMVNGSINGYDEFGEAKSWHCSHIIDFSNLSI----GDPIYDVIPIHL 888 (976)
Q Consensus 844 ~~~~~~~~~~~dg~~~~~~w~~sGIIDFgd~~i----GDP~~Dlv~l~l 888 (976)
.++-+-|||.+.+ ||-+.|+|+.=|
T Consensus 138 --------------------gvvKLCDFGFAR~L~~pgd~YTDYVATRW 166 (396)
T KOG0593|consen 138 --------------------GVVKLCDFGFARTLSAPGDNYTDYVATRW 166 (396)
T ss_pred --------------------CcEEeccchhhHhhcCCcchhhhhhhhhh
Confidence 2778999998764 888888887633
No 392
>cd05146 RIO3_euk RIO kinase family; eukaryotic RIO3, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO3 is present only in multicellular eukaryotes. Its function is still unknown.
Probab=87.69 E-value=0.98 Score=48.02 Aligned_cols=31 Identities=26% Similarity=0.338 Sum_probs=22.6
Q ss_pred hhHHHHHHHHHHHHHHHHHHhhhcCCCCCHH
Q 002043 750 AEWEIFIRTLARKKKNLVNRLTAWGHPIPKA 780 (976)
Q Consensus 750 ~~W~~~~~~l~~r~~~~~~~~~~wg~~lp~~ 780 (976)
..|+..++.-.++.-..+.++.+-|.+.|..
T Consensus 63 ~~~~~~~~~wa~kE~r~L~rl~~~Gv~vP~p 93 (197)
T cd05146 63 LNPRKIIRMWAEKEMHNLKRMQKAGIPCPEV 93 (197)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHcCCCCCeE
Confidence 4577777665667778888888878777764
No 393
>KOG4236 consensus Serine/threonine protein kinase PKC mu/PKD and related proteins [Signal transduction mechanisms]
Probab=87.22 E-value=3.3 Score=49.59 Aligned_cols=17 Identities=12% Similarity=0.501 Sum_probs=14.6
Q ss_pred ccEEEEecccCccchhh
Q 002043 672 WPYIITKRCKGKMFAQL 688 (976)
Q Consensus 672 WpYiVm~rl~G~~l~~v 688 (976)
--|+|||++.|++|+=+
T Consensus 637 rvFVVMEKl~GDMLEMI 653 (888)
T KOG4236|consen 637 RVFVVMEKLHGDMLEMI 653 (888)
T ss_pred eEEEEehhhcchHHHHH
Confidence 45999999999998754
No 394
>cd05058 PTKc_Met_Ron Catalytic domain of the Protein Tyrosine Kinases, Met and Ron. Protein Tyrosine Kinase (PTK) family; Met and Ron; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Met and Ron are receptor tyr kinases (RTKs) composed of an alpha-beta heterodimer. The extracellular alpha chain is disulfide linked to the beta chain, which contains an extracellular ligand-binding region with a sema domain, a PSI domain and four IPT repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Met binds to the ligand, hepatocyte growth factor/scatter factor (HGF/SF), and is also ca
Probab=87.06 E-value=1.5 Score=46.74 Aligned_cols=17 Identities=18% Similarity=0.483 Sum_probs=14.8
Q ss_pred CeEEecCCCCCCeEEcc
Q 002043 813 CSWIHSDIMDDNVYMEP 829 (976)
Q Consensus 813 pv~iHgDl~~~NILv~~ 829 (976)
.-++|+||+|.||++++
T Consensus 117 ~~i~H~dlk~~nili~~ 133 (262)
T cd05058 117 KKFVHRDLAARNCMLDE 133 (262)
T ss_pred CCccccccCcceEEEcC
Confidence 35799999999999975
No 395
>KOG0612 consensus Rho-associated, coiled-coil containing protein kinase [Signal transduction mechanisms]
Probab=86.34 E-value=1.2 Score=57.32 Aligned_cols=20 Identities=30% Similarity=0.574 Sum_probs=16.7
Q ss_pred CCeEEecCCCCCCeEEccCC
Q 002043 812 PCSWIHSDIMDDNVYMEPCC 831 (976)
Q Consensus 812 ~pv~iHgDl~~~NILv~~~~ 831 (976)
.--|||.|++|+|||++..+
T Consensus 193 ~mgyVHRDiKPDNvLld~~G 212 (1317)
T KOG0612|consen 193 SMGYVHRDIKPDNVLLDKSG 212 (1317)
T ss_pred hccceeccCCcceeEecccC
Confidence 34679999999999998753
No 396
>PF01163 RIO1: RIO1 family; InterPro: IPR018934 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents RIO kinase, they exhibit little sequence similarity with eukaryotic protein kinases, and are classified as atypical protein kinases []. The conformation of ATP when bound to the RIO kinases is unique when compared with ePKs, such as serine/threonine kinases or the insulin receptor tyrosine kinase, suggesting that the detailed mechanism by which the catalytic aspartate of RIO kinases participates in phosphoryl transfer may not be identical to that employed in known serine/threonine ePKs. Representatives of the RIO family are present in organisms varying from Archaea to humans, although the RIO3 proteins have only been identified in multicellular eukaryotes, to date. Yeast Rio1 and Rio2 proteins are required for proper cell cycle progression and chromosome maintenance, and are necessary for survival of the cells. These proteins are involved in the processing of 20 S pre-rRNA via late 18 S rRNA processing. ; GO: 0003824 catalytic activity, 0005524 ATP binding; PDB: 1TQP_A 1ZAR_A 1TQI_A 1ZAO_A 1TQM_A 3RE4_A 1ZTH_B 1ZP9_A 1ZTF_A.
Probab=86.32 E-value=0.47 Score=50.01 Aligned_cols=56 Identities=20% Similarity=0.343 Sum_probs=34.4
Q ss_pred CeEEecCCCCCCeEEccCCcccCCCCCCCCCCCccCCCCCCCCccCcCccceeeEEEeCCCCCCC-Ccccchhhhccccc
Q 002043 813 CSWIHSDIMDDNVYMEPCCASSRSNGNAADTGPMVNGSINGYDEFGEAKSWHCSHIIDFSNLSIG-DPIYDVIPIHLDIF 891 (976)
Q Consensus 813 pv~iHgDl~~~NILv~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~~~~~~w~~sGIIDFgd~~iG-DP~~Dlv~l~l~~f 891 (976)
.=++||||+..|||+.++ ++ .|||||.+.-= .|-. ..++
T Consensus 126 ~givHGDLs~~NIlv~~~---------------------------------~~-~iIDf~qav~~~~p~a------~~~l 165 (188)
T PF01163_consen 126 AGIVHGDLSEYNILVDDG---------------------------------KV-YIIDFGQAVDSSHPNA------EELL 165 (188)
T ss_dssp TTEEESS-STTSEEEETT---------------------------------CE-EE--GTTEEETTSTTH------HHHH
T ss_pred cCceecCCChhhEEeecc---------------------------------eE-EEEecCcceecCCccH------HHHH
Confidence 457999999999999752 24 89999976542 3322 2233
Q ss_pred CCChHHHHHHHHhcCCc
Q 002043 892 RGDSSLFKQFLESYKLP 908 (976)
Q Consensus 892 ~gd~~l~~~fl~~Y~~~ 908 (976)
..|-.-+..|+..++..
T Consensus 166 ~RDi~ni~~fF~~~~~~ 182 (188)
T PF01163_consen 166 RRDIENIIRFFKKKGVQ 182 (188)
T ss_dssp HHHHHHHHHHHHCCC--
T ss_pred HHHHHHHHHHHHHhCCC
Confidence 45666677788877765
No 397
>COG0662 {ManC} Mannose-6-phosphate isomerase [Carbohydrate transport and metabolism]
Probab=85.97 E-value=3 Score=40.95 Aligned_cols=26 Identities=23% Similarity=0.344 Sum_probs=23.6
Q ss_pred EEEEEcCCCEEEeCCCCceeeEecCC
Q 002043 333 IECTQLPGETIVVPSGWWHCILNLET 358 (976)
Q Consensus 333 ~e~vL~PGDvLfVP~GWWH~V~NLd~ 358 (976)
-++.+++||++|||+|-.|.+.|.+.
T Consensus 75 ~~~~v~~gd~~~iP~g~~H~~~N~G~ 100 (127)
T COG0662 75 EEVEVKAGDSVYIPAGTPHRVRNTGK 100 (127)
T ss_pred EEEEecCCCEEEECCCCcEEEEcCCC
Confidence 45679999999999999999999986
No 398
>COG1917 Uncharacterized conserved protein, contains double-stranded beta-helix domain [Function unknown]
Probab=85.96 E-value=3.6 Score=40.27 Aligned_cols=67 Identities=18% Similarity=0.232 Sum_probs=49.3
Q ss_pred EEeecCCCCCcccccCCCCcccEEEEEEEEEEEEeCCCCCCCcceeeecCCCCCccccCCcchhhhhhhCCCCCCCCCCE
Q 002043 254 VIIGPQRSGASWHVDPALTSAWNTLLCGRKRWALYPPGRVPLGVTVHVNEDDGDVNIETPSSLEWWLDFYPLLADDDKPI 333 (976)
Q Consensus 254 L~iGp~gSgT~lH~Dp~~t~awn~qI~GrKrW~LfPP~~~p~~v~~~~~~~~s~vd~~~Pdsl~W~l~~yP~l~~~~~~~ 333 (976)
++-..+|..+++|..|.. .....++.|+=++.+- .-
T Consensus 47 ~v~~~~G~~~~~H~hp~~-~~~~~Vl~G~~~~~~~-------------------------------------------g~ 82 (131)
T COG1917 47 LVTFEPGAVIPWHTHPLG-EQTIYVLEGEGTVQLE-------------------------------------------GE 82 (131)
T ss_pred EEEECCCcccccccCCCc-ceEEEEEecEEEEEec-------------------------------------------CC
Confidence 566678999999999832 3477788886444431 01
Q ss_pred EEEEcCCCEEEeCCCCceeeEecCCc--EEEee
Q 002043 334 ECTQLPGETIVVPSGWWHCILNLETT--IAVTQ 364 (976)
Q Consensus 334 e~vL~PGDvLfVP~GWWH~V~NLd~S--ISVt~ 364 (976)
..++++||+++||+|=.|.+.|.+++ +-|..
T Consensus 83 ~~~l~~Gd~i~ip~g~~H~~~a~~~~~~~~l~v 115 (131)
T COG1917 83 KKELKAGDVIIIPPGVVHGLKAVEDEPMVLLLV 115 (131)
T ss_pred ceEecCCCEEEECCCCeeeeccCCCCceeEEEE
Confidence 23488999999999999999999887 54444
No 399
>cd06627 STKc_Cdc7_like Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast
Probab=85.94 E-value=3.1 Score=43.70 Aligned_cols=43 Identities=19% Similarity=0.097 Sum_probs=37.8
Q ss_pred ccEEEEecccCccchhhhh---cCCHHHHHHHHHHHHHHHHHhhCC
Q 002043 672 WPYIITKRCKGKMFAQLRD---ALSGEDVLNLASFLGEQLRNLHLL 714 (976)
Q Consensus 672 WpYiVm~rl~G~~l~~v~~---~Ls~ed~~~La~~LG~~L~~LHsi 714 (976)
..|+||++++|.+|.+... .++.+....++.++...+..||+.
T Consensus 73 ~~~~v~e~~~~~~L~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~ 118 (254)
T cd06627 73 SLYIILEYAENGSLRQIIKKFGPFPESLVAVYVYQVLQGLAYLHEQ 118 (254)
T ss_pred EEEEEEecCCCCcHHHHHHhccCCCHHHHHHHHHHHHHHHHHHhhC
Confidence 5799999999999987653 588899999999999999999964
No 400
>PF06052 3-HAO: 3-hydroxyanthranilic acid dioxygenase; InterPro: IPR010329 Members of this protein family, from both bacteria and eukaryotes, are the enzyme 3-hydroxyanthranilate 3,4-dioxygenase (1.13.11.6 from EC). It is part of the kynurenine pathway for the degradation of tryptophan and the biosynthesis of nicotinic acid [].The prokaryotic homologue is involved in the 2-nitrobenzoate degradation pathway []. The enzyme acts on the tryptophan metabolite 3-hydroxyanthranilate and produces 2-amino-3-carboxymuconate semialdehyde, which can rearrange spontaneously to quinolinic acid and feed into nicotinamide biosynthesis, or undergo further enzymatic degradation.; GO: 0000334 3-hydroxyanthranilate 3,4-dioxygenase activity, 0005506 iron ion binding, 0008152 metabolic process, 0055114 oxidation-reduction process; PDB: 1ZVF_A 1YFX_A 1YFW_A 1YFY_A 1YFU_A 2QNK_A 3FE5_A.
Probab=85.71 E-value=2.6 Score=42.71 Aligned_cols=75 Identities=15% Similarity=0.196 Sum_probs=48.6
Q ss_pred CcceEEeecCCCCCcccccCCCCcccEEEEEEEEEEEEeCCCCCCCcceeeecCCCCCccccCCcchhhhhhhCCCCCCC
Q 002043 250 SYRWVIIGPQRSGASWHVDPALTSAWNTLLCGRKRWALYPPGRVPLGVTVHVNEDDGDVNIETPSSLEWWLDFYPLLADD 329 (976)
Q Consensus 250 ~~rwL~iGp~gSgT~lH~Dp~~t~awn~qI~GrKrW~LfPP~~~p~~v~~~~~~~~s~vd~~~Pdsl~W~l~~yP~l~~~ 329 (976)
++.-+++|.+...+-+|+++..- |+.|+.|.=...+...
T Consensus 33 ~f~VmvVGGPN~R~DyHine~eE--~FyQ~kG~m~Lkv~e~--------------------------------------- 71 (151)
T PF06052_consen 33 DFIVMVVGGPNQRTDYHINETEE--FFYQLKGDMCLKVVED--------------------------------------- 71 (151)
T ss_dssp SEEEEEEESSB--SSEEE-SS-E--EEEEEES-EEEEEEET---------------------------------------
T ss_pred CeEEEEEcCCCCCCccccCCcce--EEEEEeCcEEEEEEeC---------------------------------------
Confidence 34567899999999999999754 9999998633332211
Q ss_pred CCCEEEEEcCCCEEEeCCCCceeeEecCCcEEEeec
Q 002043 330 DKPIECTQLPGETIVVPSGWWHCILNLETTIAVTQN 365 (976)
Q Consensus 330 ~~~~e~vL~PGDvLfVP~GWWH~V~NLd~SISVt~N 365 (976)
.+.-++.+++||+.++|++-.|.-.-.++||.+-.-
T Consensus 72 g~~kdi~I~EGe~fLLP~~vpHsP~R~~~tiGLViE 107 (151)
T PF06052_consen 72 GKFKDIPIREGEMFLLPANVPHSPQRPADTIGLVIE 107 (151)
T ss_dssp TEEEEEEE-TTEEEEE-TT--EEEEE-TT-EEEEEE
T ss_pred CceEEEEeCCCcEEecCCCCCCCCcCCCCcEEEEEE
Confidence 123578899999999999999999888999887653
No 401
>KOG0670 consensus U4/U6-associated splicing factor PRP4 [RNA processing and modification]
Probab=85.55 E-value=0.69 Score=55.02 Aligned_cols=20 Identities=35% Similarity=0.702 Sum_probs=18.0
Q ss_pred CCCeEEecCCCCCCeEEccC
Q 002043 811 KPCSWIHSDIMDDNVYMEPC 830 (976)
Q Consensus 811 ~~pv~iHgDl~~~NILv~~~ 830 (976)
+.|-++|.||+|+||||+++
T Consensus 553 K~c~vlHaDIKPDNiLVNE~ 572 (752)
T KOG0670|consen 553 KKCGVLHADIKPDNILVNES 572 (752)
T ss_pred HhcCeeecccCccceEeccC
Confidence 56889999999999999874
No 402
>TIGR03404 bicupin_oxalic bicupin, oxalate decarboxylase family. Members of this protein family are defined as bicupins as they have two copies of the cupin domain (pfam00190). Two different known activities for members of this family are oxalate decarboxylase (EC 4.1.1.2) and oxalate oxidase (EC 1.2.3.4), although the latter activity has more often been found in distantly related monocupin (germin) proteins.
Probab=85.29 E-value=4.2 Score=47.37 Aligned_cols=65 Identities=17% Similarity=0.220 Sum_probs=46.4
Q ss_pred EEeecCCCCCcccccCCCCcccEEEEEEEEEEEEeCCCCCCCcceeeecCCCCCccccCCcchhhhhhhCCCCCCCCCCE
Q 002043 254 VIIGPQRSGASWHVDPALTSAWNTLLCGRKRWALYPPGRVPLGVTVHVNEDDGDVNIETPSSLEWWLDFYPLLADDDKPI 333 (976)
Q Consensus 254 L~iGp~gSgT~lH~Dp~~t~awn~qI~GrKrW~LfPP~~~p~~v~~~~~~~~s~vd~~~Pdsl~W~l~~yP~l~~~~~~~ 333 (976)
+-+.| |...++|.+... -|..++.|+=+..+.... .+.+
T Consensus 72 ~~l~p-G~~~~~HwH~~~--E~~yVl~G~~~v~~~d~~--------------------------------------g~~~ 110 (367)
T TIGR03404 72 MRLEP-GAIRELHWHKEA--EWAYVLYGSCRITAVDEN--------------------------------------GRNY 110 (367)
T ss_pred EEEcC-CCCCCcccCCCc--eEEEEEeeEEEEEEEcCC--------------------------------------CcEE
Confidence 44543 555678888643 399999998776654321 0224
Q ss_pred EEEEcCCCEEEeCCCCceeeEecCCc
Q 002043 334 ECTQLPGETIVVPSGWWHCILNLETT 359 (976)
Q Consensus 334 e~vL~PGDvLfVP~GWWH~V~NLd~S 359 (976)
...+++||++|||+|..|...|.++.
T Consensus 111 ~~~L~~GD~~~fP~g~~H~~~n~~~~ 136 (367)
T TIGR03404 111 IDDVGAGDLWYFPPGIPHSLQGLDEG 136 (367)
T ss_pred EeEECCCCEEEECCCCeEEEEECCCC
Confidence 44799999999999999999998653
No 403
>smart00835 Cupin_1 Cupin. This family represents the conserved barrel domain of the 'cupin' superfamily ('cupa' is the Latin term for a small barrel). This family contains 11S and 7S plant seed storage proteins, and germins. Plant seed storage proteins provide the major nitrogen source for the developing plant.
Probab=85.19 E-value=4.3 Score=40.59 Aligned_cols=63 Identities=21% Similarity=0.248 Sum_probs=43.6
Q ss_pred cCCCCCcccccCCCCcccEEEEEEEEEEEEeCCCCCCCcceeeecCCCCCccccCCcchhhhhhhCCCCCCCCCCEEEEE
Q 002043 258 PQRSGASWHVDPALTSAWNTLLCGRKRWALYPPGRVPLGVTVHVNEDDGDVNIETPSSLEWWLDFYPLLADDDKPIECTQ 337 (976)
Q Consensus 258 p~gSgT~lH~Dp~~t~awn~qI~GrKrW~LfPP~~~p~~v~~~~~~~~s~vd~~~Pdsl~W~l~~yP~l~~~~~~~e~vL 337 (976)
++|+..+.|+++.. .-+..++.|+=...+.-++. ....+..+
T Consensus 38 ~pg~~~~~h~H~~~-~e~~~Vl~G~~~~~~~~~~~-------------------------------------~~~~~~~l 79 (146)
T smart00835 38 EPGGMLPPHYHPRA-TELLYVVRGEGRVGVVDPNG-------------------------------------NKVYDARL 79 (146)
T ss_pred cCCcCcCCeeCCCC-CEEEEEEeCeEEEEEEeCCC-------------------------------------CeEEEEEe
Confidence 34666778887642 34777888875554322110 12367789
Q ss_pred cCCCEEEeCCCCceeeEecCC
Q 002043 338 LPGETIVVPSGWWHCILNLET 358 (976)
Q Consensus 338 ~PGDvLfVP~GWWH~V~NLd~ 358 (976)
++||+++||+|.+|...|.++
T Consensus 80 ~~GD~~~ip~g~~H~~~n~~~ 100 (146)
T smart00835 80 REGDVFVVPQGHPHFQVNSGD 100 (146)
T ss_pred cCCCEEEECCCCEEEEEcCCC
Confidence 999999999999999999864
No 404
>KOG0274 consensus Cdc4 and related F-box and WD-40 proteins [General function prediction only]
Probab=85.11 E-value=0.47 Score=57.71 Aligned_cols=50 Identities=22% Similarity=0.440 Sum_probs=46.3
Q ss_pred CCCCCHHHHHHHHhcCCHHHHHHHHHHhHHHHHHccCchhHHHHHHhhcC
Q 002043 21 LKIIPDEIICSILEHLTPRDVGRLACVSSVMYIFCNEEPLWMSLCLKKAS 70 (976)
Q Consensus 21 l~~LPdEll~~Ils~L~~~dL~~L~~vsr~fy~~~~~d~LWr~~~~~~~~ 70 (976)
++.||-|+...||++|++++|.++++|||.|+..+.++..|...|....+
T Consensus 108 i~~lp~el~~~il~~Ld~~~l~~~~~v~~~w~~~~~~~~~~~~~~~~~~~ 157 (537)
T KOG0274|consen 108 LSLLPSELSLHILSFLDGRDLLAVRQVCRNWNKLLDDDKVWWRMCRELIG 157 (537)
T ss_pred hhcccchhcccccccCCHHHhhhhhhhcchhhhhhhccchhhhhhhhhcc
Confidence 56799999999999999999999999999999999999999998888653
No 405
>cd08530 STKc_CNK2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains. Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, an
Probab=85.09 E-value=2.7 Score=44.32 Aligned_cols=43 Identities=12% Similarity=0.048 Sum_probs=36.5
Q ss_pred ccEEEEecccCccchhhhh-------cCCHHHHHHHHHHHHHHHHHhhCC
Q 002043 672 WPYIITKRCKGKMFAQLRD-------ALSGEDVLNLASFLGEQLRNLHLL 714 (976)
Q Consensus 672 WpYiVm~rl~G~~l~~v~~-------~Ls~ed~~~La~~LG~~L~~LHsi 714 (976)
..|+||++++|.++.+... .++.+....++.++.+.|..||+.
T Consensus 73 ~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lh~~ 122 (256)
T cd08530 73 KLCIVMEYAPFGDLSKAISKRKKKRKLIPEQEIWRIFIQLLRGLQALHEQ 122 (256)
T ss_pred EEEEEehhcCCCCHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhC
Confidence 4799999999999987543 477788889999999999999954
No 406
>cd06611 STKc_SLK_like Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated anti
Probab=84.71 E-value=3.3 Score=44.70 Aligned_cols=43 Identities=19% Similarity=0.249 Sum_probs=37.4
Q ss_pred ccEEEEecccCccchhhhh----cCCHHHHHHHHHHHHHHHHHhhCC
Q 002043 672 WPYIITKRCKGKMFAQLRD----ALSGEDVLNLASFLGEQLRNLHLL 714 (976)
Q Consensus 672 WpYiVm~rl~G~~l~~v~~----~Ls~ed~~~La~~LG~~L~~LHsi 714 (976)
..|+||++++|..+.+... .++..+...++.++..-|..||+-
T Consensus 76 ~~~lv~e~~~~~~L~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lh~~ 122 (280)
T cd06611 76 KLWILIEFCDGGALDSIMLELERGLTEPQIRYVCRQMLEALNFLHSH 122 (280)
T ss_pred eEEEEeeccCCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence 5799999999999887643 478899999999999999999954
No 407
>PHA02882 putative serine/threonine kinase; Provisional
Probab=84.67 E-value=0.59 Score=51.45 Aligned_cols=17 Identities=24% Similarity=0.405 Sum_probs=15.0
Q ss_pred CeEEecCCCCCCeEEcc
Q 002043 813 CSWIHSDIMDDNVYMEP 829 (976)
Q Consensus 813 pv~iHgDl~~~NILv~~ 829 (976)
.-++|+||+|+|||+++
T Consensus 145 ~~iiHrDiKp~Nill~~ 161 (294)
T PHA02882 145 HGISHGDIKPENIMVDG 161 (294)
T ss_pred CCeecCCCCHHHEEEcC
Confidence 45899999999999975
No 408
>smart00221 STYKc Protein kinase; unclassified specificity. Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase.
Probab=84.49 E-value=3.8 Score=41.92 Aligned_cols=43 Identities=26% Similarity=0.291 Sum_probs=37.0
Q ss_pred ccEEEEecccCccchhhhhc----CCHHHHHHHHHHHHHHHHHhhCC
Q 002043 672 WPYIITKRCKGKMFAQLRDA----LSGEDVLNLASFLGEQLRNLHLL 714 (976)
Q Consensus 672 WpYiVm~rl~G~~l~~v~~~----Ls~ed~~~La~~LG~~L~~LHsi 714 (976)
-.|+||++++|.+|.+.... ++..+...++.++.+.+..||..
T Consensus 71 ~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~ 117 (225)
T smart00221 71 PLYLVMEYCEGGDLFDYLRKKGGKLSEEEARFYLRQILEALEYLHSL 117 (225)
T ss_pred ceEEEEeccCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhC
Confidence 47999999999888876543 78889999999999999999965
No 409
>KOG1166 consensus Mitotic checkpoint serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=84.04 E-value=0.97 Score=58.11 Aligned_cols=43 Identities=14% Similarity=0.149 Sum_probs=33.5
Q ss_pred CCchhhHHHHHHHHhhhcccChhhHHhhhcccccCCCCHHHHHHHHhcccc
Q 002043 920 GGKFSRLSYHAMCYCILHDDNVLGTIFSTWKELRTAKSWEEVEMTVWGELN 970 (976)
Q Consensus 920 ~~~~~~~~~r~m~y~ilh~~~~l~~~~~~~~~~~~~~s~~el~~~~~g~~~ 970 (976)
..+++|++.+=|++-+.| .++. |+|++-+.|.||...+=+.++
T Consensus 913 ~~~~~Ry~~~~~W~~~F~------~lLN--~~~~~~p~l~~lr~~~~~~~~ 955 (974)
T KOG1166|consen 913 KTNFPRYWKRDMWNKFFD------LLLN--PDCDTLPNLQELRTELEEVLA 955 (974)
T ss_pred cccchhhhhHHHHHHHHH------HHhC--cCcccchhHHHHHHHHHHHHH
Confidence 445999999999997754 4555 999999999999887655544
No 410
>KOG0594 consensus Protein kinase PCTAIRE and related kinases [General function prediction only]
Probab=83.97 E-value=0.64 Score=52.75 Aligned_cols=20 Identities=15% Similarity=0.368 Sum_probs=16.9
Q ss_pred CCCeEEecCCCCCCeEEccC
Q 002043 811 KPCSWIHSDIMDDNVYMEPC 830 (976)
Q Consensus 811 ~~pv~iHgDl~~~NILv~~~ 830 (976)
..-..+|.||+|.||||++.
T Consensus 137 H~~~IlHRDLKPQNlLi~~~ 156 (323)
T KOG0594|consen 137 HSHGILHRDLKPQNLLISSS 156 (323)
T ss_pred HhCCeecccCCcceEEECCC
Confidence 45678999999999999863
No 411
>PRK09902 hypothetical protein; Provisional
Probab=83.39 E-value=11 Score=40.85 Aligned_cols=42 Identities=14% Similarity=0.207 Sum_probs=34.9
Q ss_pred cEEEEecccC-ccchhhh-----hcCCHHHHHHHHHHHHHHHHHhhCC
Q 002043 673 PYIITKRCKG-KMFAQLR-----DALSGEDVLNLASFLGEQLRNLHLL 714 (976)
Q Consensus 673 pYiVm~rl~G-~~l~~v~-----~~Ls~ed~~~La~~LG~~L~~LHsi 714 (976)
.++|++.++| .+|.++. ...+...+..+..++|+.+++||..
T Consensus 100 A~LVTe~L~g~~~L~~~l~~~~~~~~~~~~k~~il~~va~~ia~LH~~ 147 (216)
T PRK09902 100 ALLVTEDMAGFISIADWYAQHAVSPYSDEVRQAMLKAVALAFKKMHSV 147 (216)
T ss_pred EEEEEEeCCCCccHHHHHhcCCcCCcchHHHHHHHHHHHHHHHHHHHC
Confidence 5899999999 6787753 3446788999999999999999954
No 412
>KOG0578 consensus p21-activated serine/threonine protein kinase [Signal transduction mechanisms]
Probab=83.34 E-value=2.8 Score=50.46 Aligned_cols=44 Identities=7% Similarity=0.076 Sum_probs=28.5
Q ss_pred CCchhhHHHHHHHHhhhcccChhhHHhhhcccccCCCCHHHHHHHH
Q 002043 920 GGKFSRLSYHAMCYCILHDDNVLGTIFSTWKELRTAKSWEEVEMTV 965 (976)
Q Consensus 920 ~~~~~~~~~r~m~y~ilh~~~~l~~~~~~~~~~~~~~s~~el~~~~ 965 (976)
..-|+.|+.|||+.-..-..++ ...+.| |=|..|...+.|.-++
T Consensus 496 S~~~kdFL~~cL~~dv~~RasA-~eLL~H-pFl~~a~p~ssL~pLi 539 (550)
T KOG0578|consen 496 SPELKDFLDRCLVVDVEQRASA-KELLEH-PFLKMAKPESSLNPLI 539 (550)
T ss_pred CHHHHHHHHHHhhcchhcCCCH-HHHhcC-hhhhhcCCHHHhHHHH
Confidence 4567788888888777766666 334433 4456777777666554
No 413
>TIGR02466 conserved hypothetical protein. This family consists of uncharacterized proteins in Caulobacter crescentus CB15, Bdellovibrio bacteriovorus HD100, Synechococcus sp. WH 8102 (2), Silicibacter pomeroyi DSS-3 (2), and Hyphomonas neptunium ATCC 15444. The context of nearby genes differs substantially between members and does point to any specific biological role.
Probab=83.19 E-value=4.8 Score=43.00 Aligned_cols=95 Identities=21% Similarity=0.277 Sum_probs=52.1
Q ss_pred ceEEeecCCCCCcccccCCCCcccEEEEEEEEEEEEeCCCCCCCcceeeecCCCCCccccCCcchhhhhh---hCCCCCC
Q 002043 252 RWVIIGPQRSGASWHVDPALTSAWNTLLCGRKRWALYPPGRVPLGVTVHVNEDDGDVNIETPSSLEWWLD---FYPLLAD 328 (976)
Q Consensus 252 rwL~iGp~gSgT~lH~Dp~~t~awn~qI~GrKrW~LfPP~~~p~~v~~~~~~~~s~vd~~~Pdsl~W~l~---~yP~l~~ 328 (976)
.|.-+-.+|.....|.+++ +.|.|.=...+ |++.. .+.|..|..-. +.. ..|....
T Consensus 98 ~W~ni~~~Gg~h~~H~Hp~------~~lSgvyYl~~-p~~~g-------------~~~f~~p~~~~-~~~~~~~~~~~~~ 156 (201)
T TIGR02466 98 AWVNILPQGGTHSPHLHPG------SVISGTYYVQT-PENCG-------------AIKFEDPRLDD-MMAAPMRIPNAKR 156 (201)
T ss_pred EeEEEcCCCCccCceECCC------ceEEEEEEEeC-CCCCC-------------ceeEecCcchh-hhccccccCcccc
Confidence 6888888999999999986 34555433333 33221 11111111000 000 0011100
Q ss_pred C-CCCEEEEEcCCCEEEeCCCCceeeEecC---CcEEEeeccc
Q 002043 329 D-DKPIECTQLPGETIVVPSGWWHCILNLE---TTIAVTQNFV 367 (976)
Q Consensus 329 ~-~~~~e~vL~PGDvLfVP~GWWH~V~NLd---~SISVt~NFv 367 (976)
. ...+.+.-++|++|+.|+.-+|.|.... +=|||++|+.
T Consensus 157 ~~~~~~~v~P~~G~lvlFPS~L~H~v~p~~~~~~RISiSFNl~ 199 (201)
T TIGR02466 157 AVQRFVYVPPQEGRVLLFESWLRHEVPPNESEEERISVSFNYA 199 (201)
T ss_pred ccCccEEECCCCCeEEEECCCCceecCCCCCCCCEEEEEEeeE
Confidence 0 1223344589999999999999998653 3477777653
No 414
>KOG1163 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=83.15 E-value=0.81 Score=49.93 Aligned_cols=18 Identities=39% Similarity=0.540 Sum_probs=15.8
Q ss_pred CCCeEEecCCCCCCeEEc
Q 002043 811 KPCSWIHSDIMDDNVYME 828 (976)
Q Consensus 811 ~~pv~iHgDl~~~NILv~ 828 (976)
..-+|||.|++|+|+||-
T Consensus 128 H~r~fiHRDIKPdNFLMG 145 (341)
T KOG1163|consen 128 HLRNFIHRDIKPDNFLMG 145 (341)
T ss_pred HhhccccccCCccceeec
Confidence 357899999999999994
No 415
>COG0661 AarF Predicted unusual protein kinase [General function prediction only]
Probab=83.11 E-value=0.77 Score=55.59 Aligned_cols=55 Identities=16% Similarity=0.268 Sum_probs=36.9
Q ss_pred CeEEecCCCCCCeEEccCCcccCCCCCCCCCCCccCCCCCCCCccCcCccceeeEEEeCCCCCCCCccc--chhhhcccc
Q 002043 813 CSWIHSDIMDDNVYMEPCCASSRSNGNAADTGPMVNGSINGYDEFGEAKSWHCSHIIDFSNLSIGDPIY--DVIPIHLDI 890 (976)
Q Consensus 813 pv~iHgDl~~~NILv~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~~~~~~w~~sGIIDFgd~~iGDP~~--Dlv~l~l~~ 890 (976)
--|.|+|.|||||+|++. | + ...+|||-++-=+|-. .|+-++..+
T Consensus 284 dgffHaDpHpGNi~v~~~-------------------------g-------~-i~~lDfGi~g~l~~~~r~~l~~~~~a~ 330 (517)
T COG0661 284 DGFFHADPHPGNILVRSD-------------------------G-------R-IVLLDFGIVGRLDPKFRRYLAELLLAF 330 (517)
T ss_pred cCccccCCCccceEEecC-------------------------C-------c-EEEEcCcceecCCHHHHHHHHHHHHHH
Confidence 468999999999999763 2 3 4899999988765543 234444445
Q ss_pred cCCChHHHHH
Q 002043 891 FRGDSSLFKQ 900 (976)
Q Consensus 891 f~gd~~l~~~ 900 (976)
+..|.+.+.+
T Consensus 331 ~~rD~~~v~~ 340 (517)
T COG0661 331 LNRDYDRVAE 340 (517)
T ss_pred HhhCHHHHHH
Confidence 5556544433
No 416
>cd06608 STKc_myosinIII_like Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin I
Probab=83.10 E-value=5.1 Score=42.58 Aligned_cols=43 Identities=19% Similarity=0.165 Sum_probs=36.4
Q ss_pred ccEEEEecccCccchhhh-------hcCCHHHHHHHHHHHHHHHHHhhCC
Q 002043 672 WPYIITKRCKGKMFAQLR-------DALSGEDVLNLASFLGEQLRNLHLL 714 (976)
Q Consensus 672 WpYiVm~rl~G~~l~~v~-------~~Ls~ed~~~La~~LG~~L~~LHsi 714 (976)
-.|+||++++|.+|.+.. ..++.+....++.++.+.|..||+.
T Consensus 83 ~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~ql~~al~~lH~~ 132 (275)
T cd06608 83 QLWLVMELCGGGSVTDLVKGLRKKGKRLKEEWIAYILRETLRGLAYLHEN 132 (275)
T ss_pred EEEEEEEcCCCCcHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhcC
Confidence 479999999998887643 2577888899999999999999965
No 417
>KOG0577 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=82.99 E-value=0.57 Score=56.38 Aligned_cols=39 Identities=26% Similarity=0.360 Sum_probs=34.7
Q ss_pred EEecCCCCCCeEEccCCcccCCCCCCCCCCCccCCCCCCCCccCcCccceeeEEEeCCCCCCCCcccchhhh
Q 002043 815 WIHSDIMDDNVYMEPCCASSRSNGNAADTGPMVNGSINGYDEFGEAKSWHCSHIIDFSNLSIGDPIYDVIPI 886 (976)
Q Consensus 815 ~iHgDl~~~NILv~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~~~~~~w~~sGIIDFgd~~iGDP~~Dlv~l 886 (976)
.||.|++.||||..+. | ++-+-|||.++|-+|+--||+.
T Consensus 147 ~IHRDiKAGNILLse~-------------------------g--------~VKLaDFGSAsi~~PAnsFvGT 185 (948)
T KOG0577|consen 147 RIHRDIKAGNILLSEP-------------------------G--------LVKLADFGSASIMAPANSFVGT 185 (948)
T ss_pred HHhhhccccceEecCC-------------------------C--------eeeeccccchhhcCchhcccCC
Confidence 4999999999999753 2 7789999999999999999876
No 418
>cd08229 STKc_Nek7 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 7. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 7 (Nek7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek7 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase.
Probab=82.85 E-value=4.1 Score=43.49 Aligned_cols=43 Identities=12% Similarity=0.094 Sum_probs=36.5
Q ss_pred ccEEEEecccCccchhhhh-------cCCHHHHHHHHHHHHHHHHHhhCC
Q 002043 672 WPYIITKRCKGKMFAQLRD-------ALSGEDVLNLASFLGEQLRNLHLL 714 (976)
Q Consensus 672 WpYiVm~rl~G~~l~~v~~-------~Ls~ed~~~La~~LG~~L~~LHsi 714 (976)
.+|+||++++|.++.+... .++++....++.++...|+.||+.
T Consensus 76 ~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~ 125 (267)
T cd08229 76 ELNIVLELADAGDLSRMIKHFKKQKRLIPEKTVWKYFVQLCSALEHMHSR 125 (267)
T ss_pred eEEEEEEecCCCCHHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence 6899999999999887543 367788889999999999999954
No 419
>KOG1235 consensus Predicted unusual protein kinase [General function prediction only]
Probab=82.76 E-value=1.3 Score=53.79 Aligned_cols=65 Identities=17% Similarity=0.213 Sum_probs=45.3
Q ss_pred eEEecCCCCCCeEEccCCcccCCCCCCCCCCCccCCCCCCCCccCcCccceeeEEEeCCCCCCCCccc--chhhhccccc
Q 002043 814 SWIHSDIMDDNVYMEPCCASSRSNGNAADTGPMVNGSINGYDEFGEAKSWHCSHIIDFSNLSIGDPIY--DVIPIHLDIF 891 (976)
Q Consensus 814 v~iHgDl~~~NILv~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~~~~~~w~~sGIIDFgd~~iGDP~~--Dlv~l~l~~f 891 (976)
-|+|+|-|||||+|.+.+ .++ .-..+.|||.+..=++-. |++-+|+.+.
T Consensus 321 GffHaDPHPGNilv~~~~---------------------~~~--------~~ivllDhGl~~~is~~~r~~~~~~~~a~~ 371 (538)
T KOG1235|consen 321 GFFHADPHPGNILVRPNP---------------------EGD--------EEIVLLDHGLYAVISHKTRKDYAELWLALV 371 (538)
T ss_pred CCccCCCCCCcEEEecCC---------------------CCC--------ccEEEEcccccccccHHHHHHHHHHHHHHh
Confidence 399999999999998631 011 345999999988776654 5666666654
Q ss_pred CCChHHHHHHHHhcCC
Q 002043 892 RGDSSLFKQFLESYKL 907 (976)
Q Consensus 892 ~gd~~l~~~fl~~Y~~ 907 (976)
..|....+++.+..|+
T Consensus 372 ~~d~~~~~~~~~~~g~ 387 (538)
T KOG1235|consen 372 FEDEKAMQALAEQLGL 387 (538)
T ss_pred cccHHHHHHHHHHhcc
Confidence 4777767776665444
No 420
>KOG0983 consensus Mitogen-activated protein kinase (MAPK) kinase MKK7/JNKK2 [Signal transduction mechanisms]
Probab=82.75 E-value=2.9 Score=46.52 Aligned_cols=51 Identities=27% Similarity=0.502 Sum_probs=34.2
Q ss_pred HHHHHHhhhcCCCCCHHHHHHHhhhCChhHHHHhhhhhhccCCccCCCCCeEEecCCCCCCeEEccC
Q 002043 764 KNLVNRLTAWGHPIPKALIDKVDEYIPDDFVKLLDIYQDENGLNKVCKPCSWIHSDIMDDNVYMEPC 830 (976)
Q Consensus 764 ~~~~~~~~~wg~~lp~~l~e~l~~ylp~d~~~ll~~~~~e~~~~~~~~~pv~iHgDl~~~NILv~~~ 830 (976)
++++.+.. .++|..++-++.--+ ...+.++++ .-..||.|++|.|||+++.
T Consensus 178 ekLlkrik---~piPE~ilGk~tva~----v~AL~YLKe---------KH~viHRDvKPSNILlDe~ 228 (391)
T KOG0983|consen 178 EKLLKRIK---GPIPERILGKMTVAI----VKALYYLKE---------KHGVIHRDVKPSNILLDER 228 (391)
T ss_pred HHHHHHhc---CCchHHhhhhhHHHH----HHHHHHHHH---------hcceeecccCccceEEccC
Confidence 55555554 388877666554322 334455543 5678999999999999874
No 421
>cd06614 STKc_PAK Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two grou
Probab=82.69 E-value=5.3 Score=43.31 Aligned_cols=43 Identities=9% Similarity=0.149 Sum_probs=37.8
Q ss_pred ccEEEEecccCccchhhhh----cCCHHHHHHHHHHHHHHHHHhhCC
Q 002043 672 WPYIITKRCKGKMFAQLRD----ALSGEDVLNLASFLGEQLRNLHLL 714 (976)
Q Consensus 672 WpYiVm~rl~G~~l~~v~~----~Ls~ed~~~La~~LG~~L~~LHsi 714 (976)
-+|+||++++|.+|.++.. .++..+...++.++.+.|..||+.
T Consensus 89 ~~~lv~e~~~~~~L~~~l~~~~~~l~~~~~~~i~~~i~~~L~~lH~~ 135 (286)
T cd06614 89 ELWVVMEYMDGGSLTDIITQNFVRMNEPQIAYVCREVLQGLEYLHSQ 135 (286)
T ss_pred EEEEEEeccCCCcHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhC
Confidence 4799999999999988654 578889999999999999999974
No 422
>cd05044 PTKc_c-ros Catalytic domain of the Protein Tyrosine Kinase, C-ros. Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male
Probab=81.69 E-value=2.9 Score=44.68 Aligned_cols=43 Identities=16% Similarity=0.172 Sum_probs=35.4
Q ss_pred ccEEEEecccCccchhhhh----------cCCHHHHHHHHHHHHHHHHHhhCC
Q 002043 672 WPYIITKRCKGKMFAQLRD----------ALSGEDVLNLASFLGEQLRNLHLL 714 (976)
Q Consensus 672 WpYiVm~rl~G~~l~~v~~----------~Ls~ed~~~La~~LG~~L~~LHsi 714 (976)
.+|+||++++|.+|.+... .++..+...++.++..-++-||+.
T Consensus 73 ~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~ 125 (269)
T cd05044 73 PQYIIMELMEGGDLLSYLRDARVERFGPPLLTLKELLDICLDVAKGCVYLEQM 125 (269)
T ss_pred CeEEEEeccCCCcHHHHHHHhhhcccCCccccHHHHHHHHHHHHHHHHHHHhC
Confidence 4799999999999876432 266788889999999999999953
No 423
>cd05578 STKc_Yank1 Catalytic domain of the Protein Serine/Threonine Kinase, Yank1. Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A.
Probab=81.51 E-value=4.8 Score=42.79 Aligned_cols=43 Identities=19% Similarity=0.054 Sum_probs=37.2
Q ss_pred ccEEEEecccCccchhhhh---cCCHHHHHHHHHHHHHHHHHhhCC
Q 002043 672 WPYIITKRCKGKMFAQLRD---ALSGEDVLNLASFLGEQLRNLHLL 714 (976)
Q Consensus 672 WpYiVm~rl~G~~l~~v~~---~Ls~ed~~~La~~LG~~L~~LHsi 714 (976)
..|+||++++|.+|.+... .+++++...++.++.+.|..||..
T Consensus 74 ~~~lv~e~~~~~~L~~~l~~~~~l~~~~~~~~~~~i~~~l~~lh~~ 119 (258)
T cd05578 74 NMYLVVDLLLGGDLRYHLSQKVKFSEEQVKFWICEIVLALEYLHSK 119 (258)
T ss_pred eEEEEEeCCCCCCHHHHHHhcCCcCHHHHHHHHHHHHHHHHHHHhC
Confidence 5899999999999886543 678889999999999999999964
No 424
>cd05043 PTK_Ryk Pseudokinase domain of Ryk (Receptor related to tyrosine kinase). Protein Tyrosine Kinase (PTK) family; Receptor related to tyrosine kinase (Ryk); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ryk is a receptor tyr kinase (RTK) containing an extracellular region with two leucine-rich motifs, a transmembrane segment, and an intracellular inactive pseudokinase domain. The extracellular region of Ryk shows homology to the N-terminal domain of Wnt inhibitory factor-1 (WIF) and serves as the ligand (Wnt) binding domain of Ryk. Ryk is expressed in many different tissues both during development and in adults, suggesting a widespread function. It
Probab=80.90 E-value=4.1 Score=43.93 Aligned_cols=17 Identities=29% Similarity=0.403 Sum_probs=14.8
Q ss_pred CeEEecCCCCCCeEEcc
Q 002043 813 CSWIHSDIMDDNVYMEP 829 (976)
Q Consensus 813 pv~iHgDl~~~NILv~~ 829 (976)
.-++|+||+|.||+++.
T Consensus 136 ~~i~H~di~p~nil~~~ 152 (280)
T cd05043 136 RGVIHKDIAARNCVIDE 152 (280)
T ss_pred CCEeecccCHhhEEEcC
Confidence 45799999999999965
No 425
>PLN03224 probable serine/threonine protein kinase; Provisional
Probab=80.85 E-value=4.1 Score=49.44 Aligned_cols=18 Identities=6% Similarity=-0.012 Sum_probs=15.7
Q ss_pred ccEEEEecccCccchhhh
Q 002043 672 WPYIITKRCKGKMFAQLR 689 (976)
Q Consensus 672 WpYiVm~rl~G~~l~~v~ 689 (976)
-.|+||++++|.+|.+..
T Consensus 259 ~~~LV~Ey~~~gsL~~~L 276 (507)
T PLN03224 259 SQWLVWKFESDATLGDAL 276 (507)
T ss_pred ceEEEEEcCCCCcHHHHH
Confidence 479999999999998864
No 426
>cd05046 PTK_CCK4 Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4. Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is s
Probab=80.74 E-value=5.4 Score=42.84 Aligned_cols=43 Identities=16% Similarity=0.119 Sum_probs=36.5
Q ss_pred ccEEEEecccCccchhhhh------------cCCHHHHHHHHHHHHHHHHHhhCC
Q 002043 672 WPYIITKRCKGKMFAQLRD------------ALSGEDVLNLASFLGEQLRNLHLL 714 (976)
Q Consensus 672 WpYiVm~rl~G~~l~~v~~------------~Ls~ed~~~La~~LG~~L~~LHsi 714 (976)
..|+||++++|.+|.+... .++..+...++.++.+.|+-||+.
T Consensus 82 ~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~l~~LH~~ 136 (275)
T cd05046 82 PHYMILEYTDLGDLKQFLRATKSKDEKLKPPPLSTKQKVALCTQIALGMDHLSNA 136 (275)
T ss_pred cceEEEEecCCCcHHHHHHhcccccccccccCCCHHHHHHHHHHHHHHHHHhhhc
Confidence 3699999999988876532 478899999999999999999954
No 427
>COG4101 Predicted mannose-6-phosphate isomerase [Carbohydrate transport and metabolism]
Probab=80.37 E-value=1.7 Score=42.23 Aligned_cols=26 Identities=31% Similarity=0.350 Sum_probs=23.0
Q ss_pred EEEEEcCCCEEEeCCCCceeeEecCC
Q 002043 333 IECTQLPGETIVVPSGWWHCILNLET 358 (976)
Q Consensus 333 ~e~vL~PGDvLfVP~GWWH~V~NLd~ 358 (976)
..++..|||.+|||+|-.|+-.|+..
T Consensus 88 ~ha~~~pGDf~YiPpgVPHqp~N~S~ 113 (142)
T COG4101 88 EHAEVGPGDFFYIPPGVPHQPANLST 113 (142)
T ss_pred eeEEecCCCeEEcCCCCCCcccccCC
Confidence 45678999999999999999999863
No 428
>KOG0984 consensus Mitogen-activated protein kinase (MAPK) kinase MKK3/MKK6 [Signal transduction mechanisms]
Probab=80.08 E-value=2.5 Score=45.40 Aligned_cols=108 Identities=18% Similarity=0.278 Sum_probs=55.2
Q ss_pred hhhhcCCHHHHHHHHHHHHHHHHHhhCCCCCCCCCCccccccCCCCCCCCCcccccccCCCCchhHHHHHHHHHHHHHHH
Q 002043 687 QLRDALSGEDVLNLASFLGEQLRNLHLLPCPPFNESSLSDKLKTEPPFNNGFVEDVVDTSSVPAEWEIFIRTLARKKKNL 766 (976)
Q Consensus 687 ~v~~~Ls~ed~~~La~~LG~~L~~LHsip~p~~~~~~~~d~~~~g~~~~~~~~~~~~~~~~~~~~W~~~~~~l~~r~~~~ 766 (976)
++..+++..++.++..+| -..+++.++|-.-. +. |- .+ ...+++---+..-.++.+-+..+
T Consensus 78 ri~~tvn~q~q~r~L~dl---di~~r~~~CPf~V~--Fy-----Ga-----~~----regdvwIcME~M~tSldkfy~~v 138 (282)
T KOG0984|consen 78 RIRATVNSQEQKRLLMDL---DIIMRTVDCPFTVH--FY-----GA-----LF----REGDVWICMELMDTSLDKFYRKV 138 (282)
T ss_pred eehhhcChHHHHHHHHhh---hhhccCCCCCeEEE--ee-----hh-----hh----ccccEEEeHHHhhhhHHHHHHHH
Confidence 355566666665554444 34556777764321 11 10 10 01122222233333444333444
Q ss_pred HHHhhhcCCCCCHHHHHHHhhhCChhHHHHhhhhhhccCCccCCCCCeEEecCCCCCCeEEccC
Q 002043 767 VNRLTAWGHPIPKALIDKVDEYIPDDFVKLLDIYQDENGLNKVCKPCSWIHSDIMDDNVYMEPC 830 (976)
Q Consensus 767 ~~~~~~wg~~lp~~l~e~l~~ylp~d~~~ll~~~~~e~~~~~~~~~pv~iHgDl~~~NILv~~~ 830 (976)
++. |..+|...+-++.--+ ...+...+ ..-..||.|++|+|||++..
T Consensus 139 ~~~----g~~ipE~vlGkIa~Sv----v~al~~L~---------~kL~vIHRDvKPsNiLIn~~ 185 (282)
T KOG0984|consen 139 LKK----GGTIPEDVLGKIAVSV----VHALEFLH---------SKLSVIHRDVKPSNILINYD 185 (282)
T ss_pred Hhc----CCcCchHHhhHhHHHH----HHHHHHHH---------HHhhhhhccCCcceEEEccC
Confidence 433 5678887766654332 12223322 24567999999999999763
No 429
>KOG0658 consensus Glycogen synthase kinase-3 [Carbohydrate transport and metabolism]
Probab=80.05 E-value=1.1 Score=51.33 Aligned_cols=20 Identities=25% Similarity=0.396 Sum_probs=17.0
Q ss_pred CCeEEecCCCCCCeEEccCC
Q 002043 812 PCSWIHSDIMDDNVYMEPCC 831 (976)
Q Consensus 812 ~pv~iHgDl~~~NILv~~~~ 831 (976)
..-.+|+|++|.||||++.+
T Consensus 143 ~~~IcHRDIKPqNlLvD~~t 162 (364)
T KOG0658|consen 143 SHGICHRDIKPQNLLVDPDT 162 (364)
T ss_pred hcCcccCCCChheEEEcCCC
Confidence 36679999999999999853
No 430
>PF13013 F-box-like_2: F-box-like domain
Probab=79.92 E-value=2.9 Score=40.46 Aligned_cols=46 Identities=17% Similarity=0.239 Sum_probs=36.7
Q ss_pred ccCCCCCCCCHHHHHHHHhcCCHHHHHHHHHHhHHHHHHccCchhHHHH
Q 002043 16 DALGDLKIIPDEIICSILEHLTPRDVGRLACVSSVMYIFCNEEPLWMSL 64 (976)
Q Consensus 16 ~~lG~l~~LPdEll~~Ils~L~~~dL~~L~~vsr~fy~~~~~d~LWr~~ 64 (976)
+++ .+..||+||+..|+.+|+..++..+..+|+.++-.... +|..+
T Consensus 18 ~~l-tl~DLP~ELl~~I~~~C~~~~l~~l~~~~~~~r~~r~~--~~~~L 63 (109)
T PF13013_consen 18 QSL-TLLDLPWELLQLIFDYCNDPILLALSRTCRAYRSWRDH--IWYLL 63 (109)
T ss_pred ccc-chhhChHHHHHHHHhhcCcHHHHHHHHHHHHHHHHHHH--HHHHh
Confidence 445 56779999999999999999999999999977654443 45544
No 431
>PF13759 2OG-FeII_Oxy_5: Putative 2OG-Fe(II) oxygenase; PDB: 3BVC_B 2RG4_A.
Probab=79.75 E-value=6.2 Score=37.02 Aligned_cols=35 Identities=20% Similarity=0.325 Sum_probs=22.3
Q ss_pred CCEEEEEcCCCEEEeCCCCceeeEecC---CcEEEeec
Q 002043 331 KPIECTQLPGETIVVPSGWWHCILNLE---TTIAVTQN 365 (976)
Q Consensus 331 ~~~e~vL~PGDvLfVP~GWWH~V~NLd---~SISVt~N 365 (976)
..+.+..++|++|+.|+.-+|.|.... +=|+|++|
T Consensus 64 ~~~~~~p~~G~lvlFPs~l~H~v~p~~~~~~RisisfN 101 (101)
T PF13759_consen 64 PYYIVEPEEGDLVLFPSWLWHGVPPNNSDEERISISFN 101 (101)
T ss_dssp SEEEE---TTEEEEEETTSEEEE----SSS-EEEEEEE
T ss_pred ceEEeCCCCCEEEEeCCCCEEeccCcCCCCCEEEEEcC
Confidence 457788899999999999999997653 23666654
No 432
>KOG0592 consensus 3-phosphoinositide-dependent protein kinase (PDK1) [Signal transduction mechanisms]
Probab=79.56 E-value=1.3 Score=52.98 Aligned_cols=18 Identities=22% Similarity=0.499 Sum_probs=15.7
Q ss_pred CCeEEecCCCCCCeEEcc
Q 002043 812 PCSWIHSDIMDDNVYMEP 829 (976)
Q Consensus 812 ~pv~iHgDl~~~NILv~~ 829 (976)
..=+||.||+|+|||++.
T Consensus 192 ~~GIIHRDlKPENILLd~ 209 (604)
T KOG0592|consen 192 SNGIIHRDLKPENILLDK 209 (604)
T ss_pred hcCceeccCChhheeEcC
Confidence 356799999999999986
No 433
>KOG0588 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=79.24 E-value=7.7 Score=47.86 Aligned_cols=42 Identities=24% Similarity=0.286 Sum_probs=27.5
Q ss_pred ccCCCCcceEEec-------ceEEEEee-c-CCcccccccchhHHHHHHHH
Q 002043 543 PVGNGSNPVYLMA-------DCVVKIFV-E-GGFESSIYGLGTELEFYSLL 584 (976)
Q Consensus 543 ~~~~gs~pv~~v~-------~~v~K~~~-~-~~~~~s~~~~~~e~~~y~~l 584 (976)
..|.||.=-..++ -.+|||.| + .--+.-.+|++.|+-.-.+|
T Consensus 19 TLG~Gstg~vrlakh~~TGqlaaiKii~k~~~~s~s~~~~IerEIviMkLi 69 (786)
T KOG0588|consen 19 TLGKGSTGCVRLAKHAETGQLAAIKIIPKRSELSSSQPAGIEREIVIMKLI 69 (786)
T ss_pred cccCCCCceehhhhcccccceeEEEeeccccccccccccchhhhhHHHHHh
Confidence 4477755545554 57899999 4 34444467788898755555
No 434
>KOG2052 consensus Activin A type IB receptor, serine/threonine protein kinase [Signal transduction mechanisms]
Probab=79.03 E-value=13 Score=44.04 Aligned_cols=40 Identities=23% Similarity=0.343 Sum_probs=31.8
Q ss_pred cEEEEecccCccchh--hhhcCCHHHHHHHHHHHHHHHHHhh
Q 002043 673 PYIITKRCKGKMFAQ--LRDALSGEDVLNLASFLGEQLRNLH 712 (976)
Q Consensus 673 pYiVm~rl~G~~l~~--v~~~Ls~ed~~~La~~LG~~L~~LH 712 (976)
=|+|++|=+--.|-+ -+.+|+.+.-.+||...+.=|+.||
T Consensus 284 LwLvTdYHe~GSL~DyL~r~tv~~~~ml~LalS~AsGLaHLH 325 (513)
T KOG2052|consen 284 LWLVTDYHEHGSLYDYLNRNTVTTEGMLKLALSIASGLAHLH 325 (513)
T ss_pred EEEeeecccCCcHHHHHhhccCCHHHHHHHHHHHhhhHHHHH
Confidence 489999988777766 3457788888888888888888888
No 435
>KOG0604 consensus MAP kinase-activated protein kinase 2 [Signal transduction mechanisms]
Probab=78.75 E-value=4.6 Score=45.60 Aligned_cols=43 Identities=19% Similarity=0.393 Sum_probs=27.0
Q ss_pred ccEEEEecccCcc-chhhhhc----CCHHHHHHHHHHHHHHHHHhhCC
Q 002043 672 WPYIITKRCKGKM-FAQLRDA----LSGEDVLNLASFLGEQLRNLHLL 714 (976)
Q Consensus 672 WpYiVm~rl~G~~-l~~v~~~----Ls~ed~~~La~~LG~~L~~LHsi 714 (976)
-=-||||.++|-. ++.+.++ .|+.+...|..++|..++-||++
T Consensus 133 cLLiVmE~meGGeLfsriq~~g~~afTErea~eI~~qI~~Av~~lH~~ 180 (400)
T KOG0604|consen 133 CLLIVMECMEGGELFSRIQDRGDQAFTEREASEIMKQIGLAVRYLHSM 180 (400)
T ss_pred eeEeeeecccchHHHHHHHHcccccchHHHHHHHHHHHHHHHHHHHhc
Confidence 4589999999954 4555442 34555556666666666666643
No 436
>KOG0664 consensus Nemo-like MAPK-related serine/threonine protein kinase [Signal transduction mechanisms]
Probab=78.74 E-value=1.3 Score=49.00 Aligned_cols=40 Identities=20% Similarity=0.212 Sum_probs=32.8
Q ss_pred CCCeEEecCCCCCCeEEccCCcccCCCCCCCCCCCccCCCCCCCCccCcCccceeeEEEeCCCCCCCCcccch
Q 002043 811 KPCSWIHSDIMDDNVYMEPCCASSRSNGNAADTGPMVNGSINGYDEFGEAKSWHCSHIIDFSNLSIGDPIYDV 883 (976)
Q Consensus 811 ~~pv~iHgDl~~~NILv~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~~~~~~w~~sGIIDFgd~~iGDP~~Dl 883 (976)
...-++|.|++|||+||+.. ++--|-|||-+..-|+.--.
T Consensus 173 HsA~ILHRDIKPGNLLVNSN---------------------------------CvLKICDFGLARvee~d~~~ 212 (449)
T KOG0664|consen 173 HTANILHRDIKPGNLLVNSN---------------------------------CILKICDFGLARTWDQRDRL 212 (449)
T ss_pred hhcchhhccCCCccEEeccC---------------------------------ceEEecccccccccchhhhh
Confidence 35678999999999999653 68899999999988775433
No 437
>PLN03225 Serine/threonine-protein kinase SNT7; Provisional
Probab=78.64 E-value=1.4 Score=54.10 Aligned_cols=17 Identities=18% Similarity=0.415 Sum_probs=15.1
Q ss_pred CeEEecCCCCCCeEEcc
Q 002043 813 CSWIHSDIMDDNVYMEP 829 (976)
Q Consensus 813 pv~iHgDl~~~NILv~~ 829 (976)
.-++|+||+|+|||++.
T Consensus 274 ~gIiHRDLKP~NILl~~ 290 (566)
T PLN03225 274 TGIVHRDVKPQNIIFSE 290 (566)
T ss_pred CCEEeCcCCHHHEEEeC
Confidence 46899999999999975
No 438
>TIGR02272 gentisate_1_2 gentisate 1,2-dioxygenase. This family consists of gentisate 1,2-dioxygenases. This ring-opening enzyme acts in salicylate degradation that goes via gentisate rather than via catechol. It converts gentisate to maleylpyruvate. Some putative gentisate 1,2-dioxygenases are excluded by a relatively high trusted cutoff score because they are too closely related to known examples of 1-hydroxy-2-naphthoate dioxygenase. Therefore some homologs may be bona fide gentisate 1,2-dioxygenases even if they score below the given cutoffs.
Probab=78.56 E-value=5.6 Score=45.73 Aligned_cols=35 Identities=26% Similarity=0.244 Sum_probs=28.2
Q ss_pred EEEEEcCCCEEEeCCCCceeeEecCCcEEEeeccc
Q 002043 333 IECTQLPGETIVVPSGWWHCILNLETTIAVTQNFV 367 (976)
Q Consensus 333 ~e~vL~PGDvLfVP~GWWH~V~NLd~SISVt~NFv 367 (976)
.++..++||++.+|++.||.=.|.++...|...+.
T Consensus 120 ~~~~~~~gD~~~tP~w~wH~H~n~~d~~~~wld~l 154 (335)
T TIGR02272 120 ERTTMHPGDFIITPSWTWHDHGNPGDEPMIWLDGL 154 (335)
T ss_pred EEEeeeCCCEEEeCCCeeEecccCCCCcEEEEecC
Confidence 57789999999999999999998877665544443
No 439
>cd06631 STKc_YSK4 Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4. Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals.
Probab=77.62 E-value=8.5 Score=41.04 Aligned_cols=43 Identities=12% Similarity=0.040 Sum_probs=36.9
Q ss_pred ccEEEEecccCccchhhhh---cCCHHHHHHHHHHHHHHHHHhhCC
Q 002043 672 WPYIITKRCKGKMFAQLRD---ALSGEDVLNLASFLGEQLRNLHLL 714 (976)
Q Consensus 672 WpYiVm~rl~G~~l~~v~~---~Ls~ed~~~La~~LG~~L~~LHsi 714 (976)
..|+||++++|.+|.+... .++.+....++.++...|+.||+.
T Consensus 76 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~ 121 (265)
T cd06631 76 TISIFMEFVPGGSISSILNRFGPLPEPVFCKYTKQILDGVAYLHNN 121 (265)
T ss_pred eEEEEEecCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhC
Confidence 5899999999999987543 478888889999999999999964
No 440
>KOG0608 consensus Warts/lats-like serine threonine kinases [Cell cycle control, cell division, chromosome partitioning]
Probab=77.60 E-value=1.6 Score=53.22 Aligned_cols=19 Identities=32% Similarity=0.555 Sum_probs=16.4
Q ss_pred CCeEEecCCCCCCeEEccC
Q 002043 812 PCSWIHSDIMDDNVYMEPC 830 (976)
Q Consensus 812 ~pv~iHgDl~~~NILv~~~ 830 (976)
.--|||.||+|+||||+.+
T Consensus 747 kmGFIHRDiKPDNILIDrd 765 (1034)
T KOG0608|consen 747 KMGFIHRDIKPDNILIDRD 765 (1034)
T ss_pred hccceecccCccceEEccC
Confidence 4568999999999999874
No 441
>COG0478 RIO-like serine/threonine protein kinase fused to N-terminal HTH domain [Signal transduction mechanisms]
Probab=75.86 E-value=3.7 Score=45.95 Aligned_cols=117 Identities=19% Similarity=0.307 Sum_probs=73.2
Q ss_pred hhHHHHHHHHHHHHHHHHHHhhhcCCCCCHHH--------HHHHhhhC-------ChhHHHHhhhhhhccCCccCCCCCe
Q 002043 750 AEWEIFIRTLARKKKNLVNRLTAWGHPIPKAL--------IDKVDEYI-------PDDFVKLLDIYQDENGLNKVCKPCS 814 (976)
Q Consensus 750 ~~W~~~~~~l~~r~~~~~~~~~~wg~~lp~~l--------~e~l~~yl-------p~d~~~ll~~~~~e~~~~~~~~~pv 814 (976)
..|-..-+..++|.-.++.++..-|..+|.++ .+.++-.. +.++.++++.+-.+ .......-
T Consensus 146 ~sWl~~sRl~A~rEf~~L~~L~~~G~~VP~P~~~nRHaVvMe~ieG~eL~~~r~~~en~~~il~~il~~---~~~~~~~G 222 (304)
T COG0478 146 GSWLYVSRLAAEREFEALQRLYPEGVKVPKPIAWNRHAVVMEYIEGVELYRLRLDVENPDEILDKILEE---VRKAYRRG 222 (304)
T ss_pred cchhhhHHHHHHHHHHHHHHhhhcCCCCCCccccccceeeeehcccceeecccCcccCHHHHHHHHHHH---HHHHHHcC
Confidence 45877777777778888899988877888753 22222111 22333333322110 00013678
Q ss_pred EEecCCCCCCeEEccCCcccCCCCCCCCCCCccCCCCCCCCccCcCccceeeEEEeCCCC-CCCCcccchhhhcccccCC
Q 002043 815 WIHSDIMDDNVYMEPCCASSRSNGNAADTGPMVNGSINGYDEFGEAKSWHCSHIIDFSNL-SIGDPIYDVIPIHLDIFRG 893 (976)
Q Consensus 815 ~iHgDl~~~NILv~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~~~~~~w~~sGIIDFgd~-~iGDP~~Dlv~l~l~~f~g 893 (976)
+|||||.+-||+|++++ =.-||||=-+ .++.|-++.. +..
T Consensus 223 iVHGDlSefNIlV~~dg---------------------------------~~~vIDwPQ~v~~~hp~a~e~------l~R 263 (304)
T COG0478 223 IVHGDLSEFNILVTEDG---------------------------------DIVVIDWPQAVPISHPDAEEL------LER 263 (304)
T ss_pred ccccCCchheEEEecCC---------------------------------CEEEEeCcccccCCCCCHHHH------HHh
Confidence 89999999999998632 2379999765 5688988873 224
Q ss_pred Ch-HHHHHHHHhcCCc
Q 002043 894 DS-SLFKQFLESYKLP 908 (976)
Q Consensus 894 d~-~l~~~fl~~Y~~~ 908 (976)
|- .+++-|-+.|+..
T Consensus 264 Dv~nii~yFrrky~~~ 279 (304)
T COG0478 264 DVENIIKYFRRKYGYK 279 (304)
T ss_pred HHHHHHHHHHHhcccc
Confidence 44 5566677777763
No 442
>cd08227 PK_STRAD_alpha Pseudokinase domain of STE20-related kinase adapter protein alpha. Protein Kinase family, STE20-related kinase adapter protein (STRAD) alpha subfamily, pseudokinase domain. The STRAD alpha subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hype
Probab=75.72 E-value=8.6 Score=42.92 Aligned_cols=44 Identities=14% Similarity=0.058 Sum_probs=37.6
Q ss_pred ccEEEEecccCccchhhh-----hcCCHHHHHHHHHHHHHHHHHhhCCC
Q 002043 672 WPYIITKRCKGKMFAQLR-----DALSGEDVLNLASFLGEQLRNLHLLP 715 (976)
Q Consensus 672 WpYiVm~rl~G~~l~~v~-----~~Ls~ed~~~La~~LG~~L~~LHsip 715 (976)
..|+||++++|.++.++. ..++......++.++..-|.-||+..
T Consensus 73 ~~~lv~e~~~~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ 121 (327)
T cd08227 73 ELWVVTSFMAYGSAKDLICTHFMDGMSELAIAYILQGVLKALDYIHHMG 121 (327)
T ss_pred EEEEEEeccCCCcHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 469999999999988765 24788899999999999999999853
No 443
>PLN00212 glutelin; Provisional
Probab=75.48 E-value=10 Score=45.70 Aligned_cols=73 Identities=11% Similarity=0.026 Sum_probs=54.0
Q ss_pred CCCCCcccccCCCCcccEEEEEEEEEEEEeCCCCCCCcceeeecCCCCCccccCCcchhhhhhhCCCCCCCCCCEEEEEc
Q 002043 259 QRSGASWHVDPALTSAWNTLLCGRKRWALYPPGRVPLGVTVHVNEDDGDVNIETPSSLEWWLDFYPLLADDDKPIECTQL 338 (976)
Q Consensus 259 ~gSgT~lH~Dp~~t~awn~qI~GrKrW~LfPP~~~p~~v~~~~~~~~s~vd~~~Pdsl~W~l~~yP~l~~~~~~~e~vL~ 338 (976)
+|+..+.|+.++. +.+..++.|+=+.-+..+.. .+.+...|+
T Consensus 357 ~gam~~PHwn~nA-~eI~yV~rG~g~vqvV~~~g-------------------------------------~~vf~~~L~ 398 (493)
T PLN00212 357 QNALLSPFWNVNA-HSVVYITQGRARVQVVSNNG-------------------------------------KTVFNGVLR 398 (493)
T ss_pred CCcccCCeecCCC-CEEEEEeecceEEEEEcCCC-------------------------------------CEEEEEEEc
Confidence 5777889999985 57888888887776654320 133778899
Q ss_pred CCCEEEeCCCCceeeEecCCcEEEeecccCC
Q 002043 339 PGETIVVPSGWWHCILNLETTIAVTQNFVDS 369 (976)
Q Consensus 339 PGDvLfVP~GWWH~V~NLd~SISVt~NFv~~ 369 (976)
+||++.||.|+.|...+-.+.+-+.....+.
T Consensus 399 ~GdvfVVPqg~~v~~~A~~egfe~v~F~tna 429 (493)
T PLN00212 399 PGQLLIIPQHYAVLKKAEREGCQYIAFKTNA 429 (493)
T ss_pred CCCEEEECCCCeEEEeecCCceEEEEeecCC
Confidence 9999999999999988887765555444444
No 444
>PF05523 FdtA: WxcM-like, C-terminal ; InterPro: IPR008894 This entry includes FdtA (Q6T1W8 from SWISSPROT) from Aneurinibacillus thermoaerophilus, which has been characterised as a dTDP-6-deoxy-3,4-keto-hexulose isomerase []. It also includes WxcM (Q93S92 from SWISSPROT) from Xanthomonas campestris pv campestris) []. ; PDB: 2PAK_A 2PAE_A 2PA7_B 2PAM_A.
Probab=75.08 E-value=9 Score=38.07 Aligned_cols=71 Identities=21% Similarity=0.340 Sum_probs=36.4
Q ss_pred ecCCCCCcccccCCCCcccEEEEEEEEEEEEeCCCCCCCcceeeecCCCCCccccCCcchhhhhhhCCCCCCCCCCEEEE
Q 002043 257 GPQRSGASWHVDPALTSAWNTLLCGRKRWALYPPGRVPLGVTVHVNEDDGDVNIETPSSLEWWLDFYPLLADDDKPIECT 336 (976)
Q Consensus 257 Gp~gSgT~lH~Dp~~t~awn~qI~GrKrW~LfPP~~~p~~v~~~~~~~~s~vd~~~Pdsl~W~l~~yP~l~~~~~~~e~v 336 (976)
-+.+..-.+|.+... .-+++++.|+=+..+.... ...+++
T Consensus 40 ~~~~~~RG~H~Hk~~-~~~~~~l~Gs~~v~~~d~~---------------------------------------~~~~~~ 79 (131)
T PF05523_consen 40 VPPGVIRGWHAHKKT-TQWFIVLSGSFKVVLDDGR---------------------------------------EEEEFI 79 (131)
T ss_dssp --SS--EEEEEESS---EEEEEEES-EEEEEE-SS----------------------------------------EEEEE
T ss_pred CCCCCcccccccccc-cEEEEEEeCEEEEEEecCC---------------------------------------CcEEEE
Confidence 344554678888764 4688999998777643211 113444
Q ss_pred EcCC-CEEEeCCCCceeeEecCCcEEEeecccC
Q 002043 337 QLPG-ETIVVPSGWWHCILNLETTIAVTQNFVD 368 (976)
Q Consensus 337 L~PG-DvLfVP~GWWH~V~NLd~SISVt~NFv~ 368 (976)
|... ..|+||+|+||...+.++. ||-..+.+
T Consensus 80 L~~~~~~L~Ippg~w~~~~~~s~~-svlLv~as 111 (131)
T PF05523_consen 80 LDEPNKGLYIPPGVWHGIKNFSED-SVLLVLAS 111 (131)
T ss_dssp E--TTEEEEE-TT-EEEEE---TT--EEEEEES
T ss_pred ECCCCeEEEECCchhhHhhccCCC-cEEEEEcC
Confidence 4443 4899999999999999865 44444444
No 445
>COG4857 Predicted kinase [General function prediction only]
Probab=74.65 E-value=4.2 Score=45.51 Aligned_cols=42 Identities=17% Similarity=0.278 Sum_probs=35.7
Q ss_pred CCCeEEecCCCCCCeEEccCCcccCCCCCCCCCCCccCCCCCCCCccCcCccceeeEEEeCCCCCCCCcccchhhh
Q 002043 811 KPCSWIHSDIMDDNVYMEPCCASSRSNGNAADTGPMVNGSINGYDEFGEAKSWHCSHIIDFSNLSIGDPIYDVIPI 886 (976)
Q Consensus 811 ~~pv~iHgDl~~~NILv~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~~~~~~w~~sGIIDFgd~~iGDP~~Dlv~l 886 (976)
..-++||||||.|-|+|.+ .-+-|||=+.+.+|.-++|...+
T Consensus 226 ~aetLiHGDLHsGSIfvte----------------------------------~etkvIDPEFaFYGPmafDiG~~ 267 (408)
T COG4857 226 YAETLIHGDLHSGSIFVTE----------------------------------KETKVIDPEFAFYGPMAFDIGML 267 (408)
T ss_pred HhHHHhccccccCcEEeec----------------------------------CcceeeCccccccCcchhhHHHH
Confidence 4568999999999999976 24578999999999999998543
No 446
>cd07833 STKc_CDKL Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning
Probab=74.65 E-value=7.6 Score=41.86 Aligned_cols=42 Identities=14% Similarity=0.158 Sum_probs=35.4
Q ss_pred cEEEEecccCccchhhhh---cCCHHHHHHHHHHHHHHHHHhhCC
Q 002043 673 PYIITKRCKGKMFAQLRD---ALSGEDVLNLASFLGEQLRNLHLL 714 (976)
Q Consensus 673 pYiVm~rl~G~~l~~v~~---~Ls~ed~~~La~~LG~~L~~LHsi 714 (976)
.|+||++++|..+..... .++.++...++.++...|..||..
T Consensus 75 ~~iv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~ 119 (288)
T cd07833 75 LYLVFEYVERTLLELLEASPGGLPPDAVRSYIWQLLQAIAYCHSH 119 (288)
T ss_pred EEEEEecCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence 699999999977765432 478889999999999999999954
No 447
>COG2112 Predicted Ser/Thr protein kinase [Signal transduction mechanisms]
Probab=74.60 E-value=9.7 Score=40.29 Aligned_cols=49 Identities=22% Similarity=0.285 Sum_probs=35.6
Q ss_pred CCcceEEec----ceEEEEeecCCcccccccchhHHHHHHHHHhhCCCCCcccccceeccc
Q 002043 547 GSNPVYLMA----DCVVKIFVEGGFESSIYGLGTELEFYSLLAKVNSPLKNYIPDVLASGI 603 (976)
Q Consensus 547 gs~pv~~v~----~~v~K~~~~~~~~~s~~~~~~e~~~y~~l~~~~~~l~~~~P~~~~~g~ 603 (976)
+.+-||++. ..++|+--.+....+ +..|+++...|+-++. +|+|.-.|.
T Consensus 34 ~~s~Vyl~~~~~~~~a~Kvrr~ds~r~~---l~kEakiLeil~g~~~-----~p~vy~yg~ 86 (201)
T COG2112 34 TTSVVYLGEWRGGEVALKVRRRDSPRRN---LEKEAKILEILAGEGV-----TPEVYFYGE 86 (201)
T ss_pred cccEEEEeeccCceEEEEEecCCcchhh---HHHHHHHHHHhhhcCC-----CceEEEech
Confidence 466677765 678888777776666 8899997777765444 899987653
No 448
>KOG1152 consensus Signal transduction serine/threonine kinase with PAS/PAC sensor domain [Signal transduction mechanisms]
Probab=74.08 E-value=2.2 Score=51.50 Aligned_cols=34 Identities=26% Similarity=0.438 Sum_probs=28.3
Q ss_pred CCCCeEEecCCCCCCeEEccCCcccCCCCCCCCCCCccCCCCCCCCccCcCccceeeEEEeCCCCCC
Q 002043 810 CKPCSWIHSDIMDDNVYMEPCCASSRSNGNAADTGPMVNGSINGYDEFGEAKSWHCSHIIDFSNLSI 876 (976)
Q Consensus 810 ~~~pv~iHgDl~~~NILv~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~~~~~~w~~sGIIDFgd~~i 876 (976)
...--+||+|++++||+|+.. | .+-|||||.+.+
T Consensus 686 lh~~~ivhrdikdenvivd~~-------------------------g--------~~klidfgsaa~ 719 (772)
T KOG1152|consen 686 LHDQGIVHRDIKDENVIVDSN-------------------------G--------FVKLIDFGSAAY 719 (772)
T ss_pred ccccCceecccccccEEEecC-------------------------C--------eEEEeeccchhh
Confidence 456678999999999999753 3 678999999876
No 449
>KOG0958 consensus DNA damage-responsive repressor GIS1/RPH1, jumonji superfamily [Replication, recombination and repair]
Probab=73.88 E-value=1.4 Score=53.68 Aligned_cols=114 Identities=19% Similarity=0.266 Sum_probs=82.2
Q ss_pred CcceEEeecCCCCCcccccCCCCcccEEEEEEE-EEEEEeCCCCCCCcceee---ecCCC-C-------CccccCCcchh
Q 002043 250 SYRWVIIGPQRSGASWHVDPALTSAWNTLLCGR-KRWALYPPGRVPLGVTVH---VNEDD-G-------DVNIETPSSLE 317 (976)
Q Consensus 250 ~~rwL~iGp~gSgT~lH~Dp~~t~awn~qI~Gr-KrW~LfPP~~~p~~v~~~---~~~~~-s-------~vd~~~Pdsl~ 317 (976)
....|++|.=.+.-+||.+-.+-+++|..-.|. |.|..+||.+......+. ..+.. + ..-+..|+-
T Consensus 173 Nt~yLyfGmwKttFaWHtEdmDLySINyLHFGaPK~WYaIP~eh~~rfekla~~~fp~~~~~C~aFLRHK~~LiSP~~-- 250 (690)
T KOG0958|consen 173 NTPYLYFGMWKTTFAWHTEDMDLYSINYLHFGAPKQWYAIPPEHGDRFEKLASELFPDSSQGCPAFLRHKMTLISPSV-- 250 (690)
T ss_pred CccceeeeeeecccccccCCccceeeeeeecCCCcceeecCHHHHHHHHHHHHhhCCccccCCHHHHhhcccccCHHH--
Confidence 346799999999999999988888899988886 999999999753321100 00000 0 011222321
Q ss_pred hhhhhCCCCCCC-CCCEEEEEcCCCEEEeCCCCceeeEecCCcEEEeecccCCCCHH
Q 002043 318 WWLDFYPLLADD-DKPIECTQLPGETIVVPSGWWHCILNLETTIAVTQNFVDSKNFE 373 (976)
Q Consensus 318 W~l~~yP~l~~~-~~~~e~vL~PGDvLfVP~GWWH~V~NLd~SISVt~NFv~~~nl~ 373 (976)
|++. -+..++||++||.|.-=++-+|..-|++..+|=+.||.++..+.
T Consensus 251 --------LkqnGIpfn~ivqeagEFmITFPygyHaGFN~GfN~aES~nFat~Rwi~ 299 (690)
T KOG0958|consen 251 --------LKQNGIPFNRIVQEAGEFMITFPYGYHAGFNHGFNCAESTNFATPRWID 299 (690)
T ss_pred --------HHHcCCCcceeeecCCcEEEecCcccccccccchhhhhhhcccchhhhh
Confidence 2221 25678999999999999999999999999999999999986664
No 450
>TIGR01221 rmlC dTDP-4-dehydrorhamnose 3,5-epimerase. This enzyme participates in the biosynthesis of dTDP-L-rhamnose, often as a precursor to LPS O-antigen
Probab=73.86 E-value=18 Score=37.91 Aligned_cols=75 Identities=13% Similarity=0.075 Sum_probs=48.4
Q ss_pred eEEeecCCCCCcccccCC-CCcccEEEEEEEEEEEEeCCCCCCCcceeeecCCCCCccccCCcchhhhhhhCCCCCCCCC
Q 002043 253 WVIIGPQRSGASWHVDPA-LTSAWNTLLCGRKRWALYPPGRVPLGVTVHVNEDDGDVNIETPSSLEWWLDFYPLLADDDK 331 (976)
Q Consensus 253 wL~iGp~gSgT~lH~Dp~-~t~awn~qI~GrKrW~LfPP~~~p~~v~~~~~~~~s~vd~~~Pdsl~W~l~~yP~l~~~~~ 331 (976)
++.++.+|+.-.+|+... ...=+..+++|+=.-+++.... ++|+ +. +
T Consensus 47 n~S~S~~gvlRGlH~q~~~~q~Klv~c~~G~i~dV~VDlR~------------------~SpT-----------fG---~ 94 (176)
T TIGR01221 47 NHSKSYKGVLRGLHYQRPHPQGKLVRVLRGEVFDVAVDLRR------------------NSPT-----------FG---K 94 (176)
T ss_pred EEEEecCCEEEEEEECCCCCCceEEEEccCCEEEEEEECCC------------------CcCC-----------CC---e
Confidence 455667788888998732 1123666777765555544321 2232 21 2
Q ss_pred CEEEEEcC--CCEEEeCCCCceeeEecCCc
Q 002043 332 PIECTQLP--GETIVVPSGWWHCILNLETT 359 (976)
Q Consensus 332 ~~e~vL~P--GDvLfVP~GWWH~V~NLd~S 359 (976)
...+.|.+ +-.||||+|.+|-..+|++.
T Consensus 95 ~~~~~L~~~~~~~l~IP~G~aHGF~~L~d~ 124 (176)
T TIGR01221 95 WVGVLLSAENKRQLWIPEGFAHGFVVLSDE 124 (176)
T ss_pred EEEEEECCCCCCEEEeCCcceeEEEEcCCC
Confidence 34556666 66999999999999999876
No 451
>PF02041 Auxin_BP: Auxin binding protein; InterPro: IPR000526 Auxin binding protein is located in the lumen of the endoplasmic reticulum (ER). The primary structure contains an N-terminal hydrophobic leader sequence of 30-40 amino acids, which could represent a signal for translocation of the protein to the ER [, ]. The mature protein comprises around 165 residues, and contains a number of potential N-glycosylation sites. In vitro transport studies have demonstrated co-translational glycosylation []. Retention within the lumen of the ER correlates with an additional signal located at the C terminus, represented by the sequence Lys-Asp-Glu-Leu, known to be responsible for preventing secretion of proteins from the lumen of the ER in eukaryotic cells [, ].; GO: 0004872 receptor activity, 0005788 endoplasmic reticulum lumen; PDB: 1LR5_D 1LRH_D.
Probab=73.40 E-value=13 Score=37.88 Aligned_cols=70 Identities=23% Similarity=0.285 Sum_probs=39.1
Q ss_pred eEEeecCCCCCcccccCCCCcccEEEEEEEEEEEEeCCCCCCCcceeeecCCCCCccccCCcchhhhhhhCCCCCCCCCC
Q 002043 253 WVIIGPQRSGASWHVDPALTSAWNTLLCGRKRWALYPPGRVPLGVTVHVNEDDGDVNIETPSSLEWWLDFYPLLADDDKP 332 (976)
Q Consensus 253 wL~iGp~gSgT~lH~Dp~~t~awn~qI~GrKrW~LfPP~~~p~~v~~~~~~~~s~vd~~~Pdsl~W~l~~yP~l~~~~~~ 332 (976)
|+--=.+|+.||.|.+.++- .+++++|+=.-.|...+ .+|| .++
T Consensus 47 wlQTfAPG~~TPiHRHsCEE--VFvVLkG~GTl~l~~~~-----------------------------~~~p-----G~p 90 (167)
T PF02041_consen 47 WLQTFAPGSATPIHRHSCEE--VFVVLKGSGTLYLASSH-----------------------------EKYP-----GKP 90 (167)
T ss_dssp EEEEE-TT-B--EEEESS-E--EEEEEE--EEEEE--SS-----------------------------SSS-------S-
T ss_pred EeeeecCCCCCCCccccccE--EEEEEecceEEEEeccc-----------------------------ccCC-----CCc
Confidence 44334579999999999865 88999998766664111 1233 267
Q ss_pred EEEEEcCCCEEEeCCCCceeeEecCC
Q 002043 333 IECTQLPGETIVVPSGWWHCILNLET 358 (976)
Q Consensus 333 ~e~vL~PGDvLfVP~GWWH~V~NLd~ 358 (976)
.++...|+++++||.+--|||.|.++
T Consensus 91 qef~~~pnSTf~IPvn~~HQv~NT~e 116 (167)
T PF02041_consen 91 QEFPIFPNSTFHIPVNDAHQVWNTNE 116 (167)
T ss_dssp EEEEE-TTEEEEE-TT--EEEE---S
T ss_pred eEEEecCCCeEEeCCCCcceeecCCC
Confidence 88889999999999999999999874
No 452
>smart00220 S_TKc Serine/Threonine protein kinases, catalytic domain. Phosphotransferases. Serine or threonine-specific kinase subfamily.
Probab=73.24 E-value=11 Score=38.72 Aligned_cols=43 Identities=23% Similarity=0.274 Sum_probs=37.4
Q ss_pred ccEEEEecccCccchhhhhc---CCHHHHHHHHHHHHHHHHHhhCC
Q 002043 672 WPYIITKRCKGKMFAQLRDA---LSGEDVLNLASFLGEQLRNLHLL 714 (976)
Q Consensus 672 WpYiVm~rl~G~~l~~v~~~---Ls~ed~~~La~~LG~~L~~LHsi 714 (976)
..|+||++++|.+|.+.... ++.+....++.++.+.+..||+.
T Consensus 61 ~~~l~~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~ 106 (244)
T smart00220 61 KLYLVMEYCDGGDLFDLLKKRGRLSEDEARFYARQILSALEYLHSN 106 (244)
T ss_pred EEEEEEeCCCCCCHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHHc
Confidence 57999999999988876543 78889999999999999999976
No 453
>KOG0661 consensus MAPK related serine/threonine protein kinase [Signal transduction mechanisms]
Probab=72.57 E-value=3 Score=49.38 Aligned_cols=46 Identities=15% Similarity=0.263 Sum_probs=37.6
Q ss_pred CCCeEEecCCCCCCeEEccCCcccCCCCCCCCCCCccCCCCCCCCccCcCccceeeEEEeCCCCCC---CCcccchhhhc
Q 002043 811 KPCSWIHSDIMDDNVYMEPCCASSRSNGNAADTGPMVNGSINGYDEFGEAKSWHCSHIIDFSNLSI---GDPIYDVIPIH 887 (976)
Q Consensus 811 ~~pv~iHgDl~~~NILv~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~~~~~~w~~sGIIDFgd~~i---GDP~~Dlv~l~ 887 (976)
..-=|-|.|++|+||||.+. .+.-|=|||-+.= -+|+.|.|+.=
T Consensus 127 Hk~GfFHRDlKPENiLi~~~---------------------------------~~iKiaDFGLARev~SkpPYTeYVSTR 173 (538)
T KOG0661|consen 127 HKHGFFHRDLKPENILISGN---------------------------------DVIKIADFGLAREVRSKPPYTEYVSTR 173 (538)
T ss_pred HhcCcccccCChhheEeccc---------------------------------ceeEecccccccccccCCCcchhhhcc
Confidence 45678999999999999741 4889999999875 49999999984
Q ss_pred cc
Q 002043 888 LD 889 (976)
Q Consensus 888 l~ 889 (976)
|.
T Consensus 174 WY 175 (538)
T KOG0661|consen 174 WY 175 (538)
T ss_pred cc
Confidence 43
No 454
>PRK13290 ectC L-ectoine synthase; Reviewed
Probab=71.51 E-value=6 Score=39.07 Aligned_cols=32 Identities=16% Similarity=-0.016 Sum_probs=26.6
Q ss_pred EEEEEcCCCEEEeCCCCceeeEecCCcEEEee
Q 002043 333 IECTQLPGETIVVPSGWWHCILNLETTIAVTQ 364 (976)
Q Consensus 333 ~e~vL~PGDvLfVP~GWWH~V~NLd~SISVt~ 364 (976)
-+..|+|||++|+|++=.|...|.+++..+..
T Consensus 75 ~~~~L~aGD~i~~~~~~~H~~~N~e~~~~l~v 106 (125)
T PRK13290 75 EVHPIRPGTMYALDKHDRHYLRAGEDMRLVCV 106 (125)
T ss_pred EEEEeCCCeEEEECCCCcEEEEcCCCEEEEEE
Confidence 45679999999999999999999977655443
No 455
>COG3281 Ble Uncharacterized protein, probably involved in trehalose biosynthesis [Carbohydrate transport and metabolism]
Probab=70.77 E-value=13 Score=42.70 Aligned_cols=14 Identities=29% Similarity=0.596 Sum_probs=13.4
Q ss_pred EecCCCCCCeEEcc
Q 002043 816 IHSDIMDDNVYMEP 829 (976)
Q Consensus 816 iHgDl~~~NILv~~ 829 (976)
+|||||-+.|||.+
T Consensus 287 vHGDLHLgQVLvt~ 300 (438)
T COG3281 287 VHGDLHLGQVLVTP 300 (438)
T ss_pred HhccceehheeeeC
Confidence 89999999999987
No 456
>cd06632 STKc_MEKK1_plant Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1. Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidops
Probab=69.54 E-value=29 Score=36.45 Aligned_cols=42 Identities=19% Similarity=0.131 Sum_probs=36.3
Q ss_pred cEEEEecccCccchhhhh---cCCHHHHHHHHHHHHHHHHHhhCC
Q 002043 673 PYIITKRCKGKMFAQLRD---ALSGEDVLNLASFLGEQLRNLHLL 714 (976)
Q Consensus 673 pYiVm~rl~G~~l~~v~~---~Ls~ed~~~La~~LG~~L~~LHsi 714 (976)
.|+||++++|.+|.+... .++......++.++.+-++.||+.
T Consensus 77 ~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~ 121 (258)
T cd06632 77 LYIFLELVPGGSLAKLLKKYGSFPEPVIRLYTRQILLGLEYLHDR 121 (258)
T ss_pred EEEEEEecCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence 699999999999887543 377888889999999999999964
No 457
>cd05077 PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Janus kinase 1. Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic dom
Probab=69.28 E-value=20 Score=38.59 Aligned_cols=42 Identities=12% Similarity=0.001 Sum_probs=36.2
Q ss_pred ccEEEEecccCccchhhhh----cCCHHHHHHHHHHHHHHHHHhhC
Q 002043 672 WPYIITKRCKGKMFAQLRD----ALSGEDVLNLASFLGEQLRNLHL 713 (976)
Q Consensus 672 WpYiVm~rl~G~~l~~v~~----~Ls~ed~~~La~~LG~~L~~LHs 713 (976)
..|+||++++|.++..... .++......++.|+.+-|+.||+
T Consensus 78 ~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~ 123 (262)
T cd05077 78 ENIMVEEFVEFGPLDLFMHRKSDVLTTPWKFKVAKQLASALSYLED 123 (262)
T ss_pred CCEEEEecccCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhhh
Confidence 5699999999998876543 47888999999999999999995
No 458
>KOG1151 consensus Tousled-like protein kinase [Signal transduction mechanisms]
Probab=69.26 E-value=5.2 Score=47.01 Aligned_cols=19 Identities=21% Similarity=0.235 Sum_probs=16.4
Q ss_pred CCCeEEecCCCCCCeEEcc
Q 002043 811 KPCSWIHSDIMDDNVYMEP 829 (976)
Q Consensus 811 ~~pv~iHgDl~~~NILv~~ 829 (976)
..|-+||-||+|+|||...
T Consensus 587 ikpPIIHYDLKPgNILLv~ 605 (775)
T KOG1151|consen 587 IKPPIIHYDLKPGNILLVN 605 (775)
T ss_pred cCCCeeeeccCCccEEEec
Confidence 4667899999999999965
No 459
>KOG0660 consensus Mitogen-activated protein kinase [Signal transduction mechanisms]
Probab=68.94 E-value=2.7 Score=48.16 Aligned_cols=36 Identities=25% Similarity=0.395 Sum_probs=30.3
Q ss_pred CCCeEEecCCCCCCeEEccCCcccCCCCCCCCCCCccCCCCCCCCccCcCccceeeEEEeCCCCCCCCc
Q 002043 811 KPCSWIHSDIMDDNVYMEPCCASSRSNGNAADTGPMVNGSINGYDEFGEAKSWHCSHIIDFSNLSIGDP 879 (976)
Q Consensus 811 ~~pv~iHgDl~~~NILv~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~~~~~~w~~sGIIDFgd~~iGDP 879 (976)
.....+|.||+|.||+++.++ .+ -|-|||-+.+.|+
T Consensus 142 HSAnViHRDLKPsNll~n~~c--------------------------------~l-KI~DFGLAR~~~~ 177 (359)
T KOG0660|consen 142 HSANVIHRDLKPSNLLLNADC--------------------------------DL-KICDFGLARYLDK 177 (359)
T ss_pred hcccccccccchhheeeccCC--------------------------------CE-Eeccccceeeccc
Confidence 567789999999999998754 34 8999999999875
No 460
>cd06645 STKc_MAP4K3 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated
Probab=68.34 E-value=28 Score=37.11 Aligned_cols=43 Identities=19% Similarity=0.193 Sum_probs=37.6
Q ss_pred ccEEEEecccCccchhhh---hcCCHHHHHHHHHHHHHHHHHhhCC
Q 002043 672 WPYIITKRCKGKMFAQLR---DALSGEDVLNLASFLGEQLRNLHLL 714 (976)
Q Consensus 672 WpYiVm~rl~G~~l~~v~---~~Ls~ed~~~La~~LG~~L~~LHsi 714 (976)
-.|+||++++|.+|.+.. ..+++.+...++.++..-+.-||+.
T Consensus 80 ~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~ 125 (267)
T cd06645 80 KLWICMEFCGGGSLQDIYHVTGPLSESQIAYVSRETLQGLYYLHSK 125 (267)
T ss_pred EEEEEEeccCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence 369999999999998754 3678899999999999999999965
No 461
>KOG0586 consensus Serine/threonine protein kinase [General function prediction only]
Probab=67.86 E-value=20 Score=43.80 Aligned_cols=19 Identities=16% Similarity=0.468 Sum_probs=16.9
Q ss_pred CCCeEEecCCCCCCeEEcc
Q 002043 811 KPCSWIHSDIMDDNVYMEP 829 (976)
Q Consensus 811 ~~pv~iHgDl~~~NILv~~ 829 (976)
..-.++|+||+.+|||.+.
T Consensus 172 H~k~ivHrdLk~eNilL~~ 190 (596)
T KOG0586|consen 172 HSKNIVHRDLKAENILLDE 190 (596)
T ss_pred hhcceeccccchhhccccc
Confidence 4578999999999999975
No 462
>KOG0663 consensus Protein kinase PITSLRE and related kinases [General function prediction only]
Probab=67.47 E-value=4.4 Score=46.30 Aligned_cols=52 Identities=19% Similarity=0.328 Sum_probs=36.6
Q ss_pred CeEEecCCCCCCeEEccCCcccCCCCCCCCCCCccCCCCCCCCccCcCccceeeEEEeCCCCC-CCCcccchhhhccccc
Q 002043 813 CSWIHSDIMDDNVYMEPCCASSRSNGNAADTGPMVNGSINGYDEFGEAKSWHCSHIIDFSNLS-IGDPIYDVIPIHLDIF 891 (976)
Q Consensus 813 pv~iHgDl~~~NILv~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~~~~~~w~~sGIIDFgd~~-iGDP~~Dlv~l~l~~f 891 (976)
.=++|.||++.|+|+... | ..-|-|||-|. +|.|.--+.++-+.+.
T Consensus 196 ~wilHRDLK~SNLLm~~~-------------------------G--------~lKiaDFGLAR~ygsp~k~~T~lVVTLW 242 (419)
T KOG0663|consen 196 NWILHRDLKTSNLLLSHK-------------------------G--------ILKIADFGLAREYGSPLKPYTPLVVTLW 242 (419)
T ss_pred ceeEecccchhheeeccC-------------------------C--------cEEecccchhhhhcCCcccCcceEEEee
Confidence 456999999999999763 2 45788999985 7899655544444444
Q ss_pred CCChHH
Q 002043 892 RGDSSL 897 (976)
Q Consensus 892 ~gd~~l 897 (976)
...+++
T Consensus 243 YRaPEL 248 (419)
T KOG0663|consen 243 YRAPEL 248 (419)
T ss_pred ecCHHH
Confidence 455553
No 463
>COG1718 RIO1 Serine/threonine protein kinase involved in cell cycle control [Signal transduction mechanisms / Cell division and chromosome partitioning]
Probab=67.38 E-value=3.9 Score=45.22 Aligned_cols=59 Identities=17% Similarity=0.229 Sum_probs=42.0
Q ss_pred CCeEEecCCCCCCeEEccCCcccCCCCCCCCCCCccCCCCCCCCccCcCccceeeEEEeCCCCCCCCcccchhhhccccc
Q 002043 812 PCSWIHSDIMDDNVYMEPCCASSRSNGNAADTGPMVNGSINGYDEFGEAKSWHCSHIIDFSNLSIGDPIYDVIPIHLDIF 891 (976)
Q Consensus 812 ~pv~iHgDl~~~NILv~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~~~~~~w~~sGIIDFgd~~iGDP~~Dlv~l~l~~f 891 (976)
..-++||||..-|||+.+ ....||||+-+-.=| +..+ ..+.
T Consensus 185 ~a~LVHgDLSEyNiL~~~----------------------------------~~p~iID~~QaV~~~--hp~a---~e~L 225 (268)
T COG1718 185 EAGLVHGDLSEYNILVHD----------------------------------GEPYIIDVSQAVTID--HPNA---FEFL 225 (268)
T ss_pred hcCcccccchhhheEEEC----------------------------------CeEEEEECccccccC--CCch---HHHH
Confidence 367899999999999974 244899999987654 2222 2234
Q ss_pred CCChHHHHHHHHhcCCcc
Q 002043 892 RGDSSLFKQFLESYKLPL 909 (976)
Q Consensus 892 ~gd~~l~~~fl~~Y~~~~ 909 (976)
..|..-+-.|++-||...
T Consensus 226 ~RDv~Ni~~fF~r~gv~~ 243 (268)
T COG1718 226 ERDVRNIARFFRRKGVEA 243 (268)
T ss_pred HHHHHHHHHHHHHcCCCC
Confidence 456666777888888764
No 464
>KOG0671 consensus LAMMER dual specificity kinases [Signal transduction mechanisms]
Probab=66.93 E-value=4.5 Score=46.83 Aligned_cols=18 Identities=17% Similarity=0.357 Sum_probs=15.5
Q ss_pred CCeEEecCCCCCCeEEcc
Q 002043 812 PCSWIHSDIMDDNVYMEP 829 (976)
Q Consensus 812 ~pv~iHgDl~~~NILv~~ 829 (976)
.--++|.||+|+|||...
T Consensus 210 ~~kl~HTDLKPENILfvs 227 (415)
T KOG0671|consen 210 DLKLTHTDLKPENILFVS 227 (415)
T ss_pred hcceeecCCChheEEEec
Confidence 456899999999999965
No 465
>PHA03210 serine/threonine kinase US3; Provisional
Probab=66.64 E-value=3.3 Score=49.84 Aligned_cols=16 Identities=31% Similarity=0.580 Sum_probs=14.5
Q ss_pred eEEecCCCCCCeEEcc
Q 002043 814 SWIHSDIMDDNVYMEP 829 (976)
Q Consensus 814 v~iHgDl~~~NILv~~ 829 (976)
-+||+||+|+|||++.
T Consensus 287 gIiHrDLKP~NILl~~ 302 (501)
T PHA03210 287 KLIHRDIKLENIFLNC 302 (501)
T ss_pred CeecCCCCHHHEEECC
Confidence 5799999999999975
No 466
>KOG0668 consensus Casein kinase II, alpha subunit [Signal transduction mechanisms; Cell cycle control, cell division, chromosome partitioning; Transcription]
Probab=66.58 E-value=7.1 Score=42.63 Aligned_cols=42 Identities=19% Similarity=0.311 Sum_probs=35.0
Q ss_pred CCCCeEEecCCCCCCeEEccCCcccCCCCCCCCCCCccCCCCCCCCccCcCccceeeEEEeCCCCCCCCcccch
Q 002043 810 CKPCSWIHSDIMDDNVYMEPCCASSRSNGNAADTGPMVNGSINGYDEFGEAKSWHCSHIIDFSNLSIGDPIYDV 883 (976)
Q Consensus 810 ~~~pv~iHgDl~~~NILv~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~~~~~~w~~sGIIDFgd~~iGDP~~Dl 883 (976)
|..--+.|.|++|.||+++... +---+||||-+.+-.|-.|.
T Consensus 148 CHS~GImHRDVKPhNvmIdh~~--------------------------------rkLrlIDWGLAEFYHp~~eY 189 (338)
T KOG0668|consen 148 CHSMGIMHRDVKPHNVMIDHEL--------------------------------RKLRLIDWGLAEFYHPGKEY 189 (338)
T ss_pred HHhcCcccccCCcceeeechhh--------------------------------ceeeeeecchHhhcCCCcee
Confidence 4566789999999999998743 44479999999999998887
No 467
>cd06606 STKc_MAPKKK Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKK
Probab=66.58 E-value=25 Score=36.64 Aligned_cols=42 Identities=19% Similarity=0.128 Sum_probs=37.0
Q ss_pred ccEEEEecccCccchhhhh---cCCHHHHHHHHHHHHHHHHHhhC
Q 002043 672 WPYIITKRCKGKMFAQLRD---ALSGEDVLNLASFLGEQLRNLHL 713 (976)
Q Consensus 672 WpYiVm~rl~G~~l~~v~~---~Ls~ed~~~La~~LG~~L~~LHs 713 (976)
..|+||++++|.++.+... .++.++...++.++...|..||+
T Consensus 75 ~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~ 119 (260)
T cd06606 75 TLNIFLEYVSGGSLSSLLKKFGKLPEPVIRKYTRQILEGLAYLHS 119 (260)
T ss_pred eEEEEEEecCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 5799999999999887543 57889999999999999999996
No 468
>KOG1236 consensus Predicted unusual protein kinase [General function prediction only]
Probab=65.68 E-value=7.1 Score=46.04 Aligned_cols=18 Identities=22% Similarity=0.401 Sum_probs=15.7
Q ss_pred CeEEecCCCCCCeEEccC
Q 002043 813 CSWIHSDIMDDNVYMEPC 830 (976)
Q Consensus 813 pv~iHgDl~~~NILv~~~ 830 (976)
-=|+|+|+||+||+|...
T Consensus 364 DNFvHaDlHPGNVlirf~ 381 (565)
T KOG1236|consen 364 DNFVHADLHPGNVLIRFN 381 (565)
T ss_pred hcceecccCCCcEEEEec
Confidence 358999999999999874
No 469
>KOG2345 consensus Serine/threonine protein kinase/TGF-beta stimulated factor [Transcription; Lipid transport and metabolism; Signal transduction mechanisms]
Probab=65.11 E-value=5.1 Score=44.17 Aligned_cols=19 Identities=26% Similarity=0.433 Sum_probs=16.5
Q ss_pred CCCeEEecCCCCCCeEEcc
Q 002043 811 KPCSWIHSDIMDDNVYMEP 829 (976)
Q Consensus 811 ~~pv~iHgDl~~~NILv~~ 829 (976)
..|.+.|+|++|+|||...
T Consensus 146 ~~~~yAH~DiKP~NILls~ 164 (302)
T KOG2345|consen 146 KEPPYAHRDIKPANILLSD 164 (302)
T ss_pred cCCcccccCCCcceeEecC
Confidence 4567999999999999964
No 470
>cd06651 STKc_MEKK3 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development
Probab=64.96 E-value=36 Score=36.39 Aligned_cols=43 Identities=16% Similarity=0.030 Sum_probs=36.8
Q ss_pred ccEEEEecccCccchhhh---hcCCHHHHHHHHHHHHHHHHHhhCC
Q 002043 672 WPYIITKRCKGKMFAQLR---DALSGEDVLNLASFLGEQLRNLHLL 714 (976)
Q Consensus 672 WpYiVm~rl~G~~l~~v~---~~Ls~ed~~~La~~LG~~L~~LHsi 714 (976)
..|++|++++|.+|.+.. ..++......++.++.+-|..||+.
T Consensus 80 ~~~l~~e~~~~~~L~~~l~~~~~l~~~~~~~~~~qi~~~l~~LH~~ 125 (266)
T cd06651 80 TLTIFMEYMPGGSVKDQLKAYGALTESVTRKYTRQILEGMSYLHSN 125 (266)
T ss_pred EEEEEEeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhC
Confidence 579999999999988654 3578888899999999999999964
No 471
>cd07829 STKc_CDK_like Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the
Probab=63.39 E-value=22 Score=37.97 Aligned_cols=42 Identities=17% Similarity=0.116 Sum_probs=34.9
Q ss_pred ccEEEEecccCccchhhh----hcCCHHHHHHHHHHHHHHHHHhhCC
Q 002043 672 WPYIITKRCKGKMFAQLR----DALSGEDVLNLASFLGEQLRNLHLL 714 (976)
Q Consensus 672 WpYiVm~rl~G~~l~~v~----~~Ls~ed~~~La~~LG~~L~~LHsi 714 (976)
-.|+||++++| ++.+.. ..++..+...++.++..-|..||..
T Consensus 72 ~~~~v~e~~~~-~l~~~i~~~~~~~~~~~~~~~~~~i~~~l~~LH~~ 117 (282)
T cd07829 72 KLYLVFEYCDM-DLKKYLDKRPGPLSPNLIKSIMYQLLRGLAYCHSH 117 (282)
T ss_pred ceEEEecCcCc-CHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHHC
Confidence 47999999997 566544 2578899999999999999999964
No 472
>TIGR01479 GMP_PMI mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase. This enzyme is known to be bifunctional, as both mannose-6-phosphate isomerase (EC 5.3.1.8) (PMI) and mannose-1-phosphate guanylyltransferase (EC 2.7.7.22) in Pseudomonas aeruginosa, Xanthomonas campestris, and Gluconacetobacter xylinus. The literature on the enzyme from E. coli attributes mannose-6-phosphate isomerase activity to an adjacent gene, but the present sequence has not been shown to lack the activity. The PMI domain is C-terminal.
Probab=62.98 E-value=21 Score=42.91 Aligned_cols=26 Identities=19% Similarity=0.133 Sum_probs=23.4
Q ss_pred EEEEEcCCCEEEeCCCCceeeEecCC
Q 002043 333 IECTQLPGETIVVPSGWWHCILNLET 358 (976)
Q Consensus 333 ~e~vL~PGDvLfVP~GWWH~V~NLd~ 358 (976)
-+..++|||++|||+|-.|...|.++
T Consensus 415 ~~~~l~~GDsi~ip~~~~H~~~N~g~ 440 (468)
T TIGR01479 415 ETLLLTENESTYIPLGVIHRLENPGK 440 (468)
T ss_pred EEEEecCCCEEEECCCCcEEEEcCCC
Confidence 45679999999999999999999875
No 473
>KOG0600 consensus Cdc2-related protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=62.86 E-value=8.4 Score=46.12 Aligned_cols=95 Identities=19% Similarity=0.243 Sum_probs=58.4
Q ss_pred CCCeEEecCCCCCCeEEccCCcccCCCCCCCCCCCccCCCCCCCCccCcCccceeeEEEeCCCCCCCCcccc--hhhhcc
Q 002043 811 KPCSWIHSDIMDDNVYMEPCCASSRSNGNAADTGPMVNGSINGYDEFGEAKSWHCSHIIDFSNLSIGDPIYD--VIPIHL 888 (976)
Q Consensus 811 ~~pv~iHgDl~~~NILv~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~~~~~~w~~sGIIDFgd~~iGDP~~D--lv~l~l 888 (976)
...-++|.||+..|||++.. | +.-|=|||-+.+-+|--. +..--+
T Consensus 235 H~~gvlHRDIK~SNiLidn~-------------------------G--------~LKiaDFGLAr~y~~~~~~~~T~rVv 281 (560)
T KOG0600|consen 235 HSRGVLHRDIKGSNILIDNN-------------------------G--------VLKIADFGLARFYTPSGSAPYTSRVV 281 (560)
T ss_pred hhcCeeeccccccceEEcCC-------------------------C--------CEEeccccceeeccCCCCcccccceE
Confidence 45668999999999999863 2 558899999997766553 322222
Q ss_pred cccCCChHHHHHHHHhcCCccccccccCCCCCCchhhHHHHHHHHhhhcccChhhHHhhhcccccCCCCHHHHHH
Q 002043 889 DIFRGDSSLFKQFLESYKLPLVRRMQQHGSGGGKFSRLSYHAMCYCILHDDNVLGTIFSTWKELRTAKSWEEVEM 963 (976)
Q Consensus 889 ~~f~gd~~l~~~fl~~Y~~~~~~~~~~~~~~~~~~~~~~~r~m~y~ilh~~~~l~~~~~~~~~~~~~~s~~el~~ 963 (976)
.+....|+|+=. -..|+..-.- |.++ || |+.+|..-|-++..+-.|+|+.
T Consensus 282 TLWYRpPELLLG-~t~Yg~aVDl----WS~G--------------CI------l~El~~gkPI~~G~tEveQl~k 331 (560)
T KOG0600|consen 282 TLWYRPPELLLG-ATSYGTAVDL----WSVG--------------CI------LAELFLGKPILQGRTEVEQLHK 331 (560)
T ss_pred EeeccChHHhcC-Ccccccceee----hhhh--------------HH------HHHHHcCCCCcCCccHHHHHHH
Confidence 333455654311 0234433211 2221 44 5777877777777777777764
No 474
>cd08226 PK_STRAD_beta Pseudokinase domain of STE20-related kinase adapter protein beta. Protein Kinase family, STE20-related kinase adapter protein (STRAD) beta subfamily, pseudokinase domain. The STRAD-beta subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpig
Probab=62.72 E-value=27 Score=38.94 Aligned_cols=43 Identities=19% Similarity=0.094 Sum_probs=36.2
Q ss_pred ccEEEEecccCccchhhhh-----cCCHHHHHHHHHHHHHHHHHhhCC
Q 002043 672 WPYIITKRCKGKMFAQLRD-----ALSGEDVLNLASFLGEQLRNLHLL 714 (976)
Q Consensus 672 WpYiVm~rl~G~~l~~v~~-----~Ls~ed~~~La~~LG~~L~~LHsi 714 (976)
+.|+||++++|.++.++.. .+++.....++.++.+-|.-||+-
T Consensus 73 ~~~~v~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~qi~~aL~~lH~~ 120 (328)
T cd08226 73 WLWVISPFMAYGSANSLLKTYFPEGMSEALIGNILFGALRGLNYLHQN 120 (328)
T ss_pred ceEEEEecccCCCHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHHhC
Confidence 5799999999988877543 367778889999999999999974
No 475
>KOG4341 consensus F-box protein containing LRR [General function prediction only]
Probab=61.99 E-value=5.5 Score=46.67 Aligned_cols=47 Identities=15% Similarity=0.288 Sum_probs=41.1
Q ss_pred CCCHHHHHHHHhcCCHHHHHHHHHHhHHHHHHccCchhHHHHHHhhc
Q 002043 23 IIPDEIICSILEHLTPRDVGRLACVSSVMYIFCNEEPLWMSLCLKKA 69 (976)
Q Consensus 23 ~LPdEll~~Ils~L~~~dL~~L~~vsr~fy~~~~~d~LWr~~~~~~~ 69 (976)
.||+|+++.|+++||..+|.+-+++|+.|-..+-|-.-|..+=+-.+
T Consensus 74 ~LPpEl~lkvFS~LDtksl~r~a~~c~~~n~~AlD~~~~q~idL~t~ 120 (483)
T KOG4341|consen 74 SLPPELLLKVFSMLDTKSLCRAAQCCTMWNKLALDGSCWQHIDLFTF 120 (483)
T ss_pred cCCHHHHHHHHHHHhHHHHHHHHHHHHHhhhhhhccccceeeehhcc
Confidence 59999999999999999999999999999999888877776655443
No 476
>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]
Probab=61.93 E-value=5.3 Score=48.76 Aligned_cols=15 Identities=20% Similarity=0.547 Sum_probs=13.4
Q ss_pred eEEecCCCCCCeEEc
Q 002043 814 SWIHSDIMDDNVYME 828 (976)
Q Consensus 814 v~iHgDl~~~NILv~ 828 (976)
-.+|+||+|+|||.+
T Consensus 435 gvvhRDLkp~NIL~~ 449 (612)
T KOG0603|consen 435 GVVHRDLKPGNILLD 449 (612)
T ss_pred CeeecCCChhheeec
Confidence 349999999999996
No 477
>cd06653 STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain, functionally uncharacterized subgroup 1. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MEKK3-like subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phospho
Probab=61.68 E-value=43 Score=35.77 Aligned_cols=43 Identities=14% Similarity=0.020 Sum_probs=35.8
Q ss_pred ccEEEEecccCccchhhh---hcCCHHHHHHHHHHHHHHHHHhhCC
Q 002043 672 WPYIITKRCKGKMFAQLR---DALSGEDVLNLASFLGEQLRNLHLL 714 (976)
Q Consensus 672 WpYiVm~rl~G~~l~~v~---~~Ls~ed~~~La~~LG~~L~~LHsi 714 (976)
..|+||++++|..|.+.. ..++......++.++..-|..||+-
T Consensus 80 ~~~~v~e~~~~~~L~~~~~~~~~l~~~~~~~~~~~i~~al~~LH~~ 125 (264)
T cd06653 80 KLSIFVEYMPGGSIKDQLKAYGALTENVTRRYTRQILQGVSYLHSN 125 (264)
T ss_pred EEEEEEEeCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhC
Confidence 468999999999987643 2477888889999999999999944
No 478
>PRK09943 DNA-binding transcriptional repressor PuuR; Provisional
Probab=59.73 E-value=12 Score=38.94 Aligned_cols=29 Identities=17% Similarity=0.288 Sum_probs=24.4
Q ss_pred EEEEEcCCCEEEeCCCCceeeEecCCcEE
Q 002043 333 IECTQLPGETIVVPSGWWHCILNLETTIA 361 (976)
Q Consensus 333 ~e~vL~PGDvLfVP~GWWH~V~NLd~SIS 361 (976)
-+..|++||++|+|++-.|...|.++.-+
T Consensus 146 ~~~~l~~Gd~~~~~~~~~H~~~n~~~~~~ 174 (185)
T PRK09943 146 QDYHLVAGQSYAINTGIPHSFSNTSAGIC 174 (185)
T ss_pred EEEEecCCCEEEEcCCCCeeeeCCCCCCe
Confidence 45679999999999999999999876433
No 479
>KOG0584 consensus Serine/threonine protein kinase [General function prediction only]
Probab=58.74 E-value=12 Score=45.70 Aligned_cols=20 Identities=25% Similarity=0.414 Sum_probs=17.1
Q ss_pred CCCeEEecCCCCCCeEEccC
Q 002043 811 KPCSWIHSDIMDDNVYMEPC 830 (976)
Q Consensus 811 ~~pv~iHgDl~~~NILv~~~ 830 (976)
..|-.||.||+.+||+|+..
T Consensus 162 ~~PPIIHRDLKCDNIFinG~ 181 (632)
T KOG0584|consen 162 QDPPIIHRDLKCDNIFVNGN 181 (632)
T ss_pred CCCCccccccccceEEEcCC
Confidence 56778999999999999753
No 480
>cd07831 STKc_MOK Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase. Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation.
Probab=58.71 E-value=40 Score=36.08 Aligned_cols=43 Identities=12% Similarity=0.132 Sum_probs=35.8
Q ss_pred ccEEEEecccCccchhhhh---cCCHHHHHHHHHHHHHHHHHhhCC
Q 002043 672 WPYIITKRCKGKMFAQLRD---ALSGEDVLNLASFLGEQLRNLHLL 714 (976)
Q Consensus 672 WpYiVm~rl~G~~l~~v~~---~Ls~ed~~~La~~LG~~L~~LHsi 714 (976)
..|+||++++|..++.+.. .++..+...++.++..-|+.||+.
T Consensus 74 ~~~lv~e~~~~~l~~~l~~~~~~~~~~~~~~~~~qi~~~L~~LH~~ 119 (282)
T cd07831 74 RLALVFELMDMNLYELIKGRKRPLPEKRVKSYMYQLLKSLDHMHRN 119 (282)
T ss_pred cEEEEEecCCccHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence 4799999999966655543 478899999999999999999954
No 481
>KOG0575 consensus Polo-like serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=58.45 E-value=45 Score=40.93 Aligned_cols=39 Identities=18% Similarity=0.056 Sum_probs=27.3
Q ss_pred CCCcceEEec------ceEEEEeec-C-CcccccccchhHHHHHHHH
Q 002043 546 NGSNPVYLMA------DCVVKIFVE-G-GFESSIYGLGTELEFYSLL 584 (976)
Q Consensus 546 ~gs~pv~~v~------~~v~K~~~~-~-~~~~s~~~~~~e~~~y~~l 584 (976)
+|+.-||.+. .+.+|+.|. . -......-+..|++..+-|
T Consensus 29 GgFA~cYe~~~~~tge~~A~KvVpk~~l~k~~~reKv~~EIeIHr~L 75 (592)
T KOG0575|consen 29 GGFARCYEARDLDTGEVVAVKVVPKKLLKKPKQREKVLNEIEIHRSL 75 (592)
T ss_pred CcceEEEEEEEcCCCcEEEEEEeehHHhcCcchHHHHHHHHHHHHhc
Confidence 4699999887 589999994 2 3333334467888866666
No 482
>PF10009 DUF2252: Uncharacterized protein conserved in bacteria (DUF2252); InterPro: IPR018721 This domain has no known function.
Probab=57.26 E-value=6 Score=46.37 Aligned_cols=73 Identities=25% Similarity=0.306 Sum_probs=51.4
Q ss_pred CCCCeEEecCCCCCCeEEccCCcccCCCCCCCCCCCccCCCCCCCCccCcCccceeeEEEeCCCCCCCCcccchhhhccc
Q 002043 810 CKPCSWIHSDIMDDNVYMEPCCASSRSNGNAADTGPMVNGSINGYDEFGEAKSWHCSHIIDFSNLSIGDPIYDVIPIHLD 889 (976)
Q Consensus 810 ~~~pv~iHgDl~~~NILv~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~~~~~~w~~sGIIDFgd~~iGDP~~Dlv~l~l~ 889 (976)
..++|||+||.|.+|+=.=.+ .+| --+-+|=||..+.+|++.+|+.-+..+
T Consensus 40 ~~~~v~icGD~Hl~NFG~~~~-----------------------~~~------~~vFdiNDFDEa~~gp~~wDl~Rla~S 90 (385)
T PF10009_consen 40 SGPPVWICGDAHLENFGAFAS-----------------------PEG------RVVFDINDFDEALPGPFEWDLKRLATS 90 (385)
T ss_pred CCCceEEeccchhhccCcccC-----------------------CCC------CEEecCCCCCcCCcCChHHHHHHHHHH
Confidence 579999999999999955331 222 146788899999999999999544332
Q ss_pred c--cC---C----C-hHHHHHHHHhcCCcccc
Q 002043 890 I--FR---G----D-SSLFKQFLESYKLPLVR 911 (976)
Q Consensus 890 ~--f~---g----d-~~l~~~fl~~Y~~~~~~ 911 (976)
+ .. | + ....+.|+++|.....+
T Consensus 91 i~laa~~~gl~~~~~~~~~~~~~~~Y~~~l~~ 122 (385)
T PF10009_consen 91 IVLAARENGLSDKDARKAVRAFLEGYREALAD 122 (385)
T ss_pred HHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHH
Confidence 1 11 1 1 26788899999866433
No 483
>PRK15457 ethanolamine utilization protein EutQ; Provisional
Probab=57.13 E-value=62 Score=35.41 Aligned_cols=26 Identities=12% Similarity=0.101 Sum_probs=20.2
Q ss_pred EEEEEcCCCEEEeCCCCceeeEecCC
Q 002043 333 IECTQLPGETIVVPSGWWHCILNLET 358 (976)
Q Consensus 333 ~e~vL~PGDvLfVP~GWWH~V~NLd~ 358 (976)
-+.+++|||++|||+|-.|+-.+.+.
T Consensus 193 ~t~~l~pGDvlfIPkGs~~hf~tp~~ 218 (233)
T PRK15457 193 ETMIAKAGDVMFIPKGSSIEFGTPSS 218 (233)
T ss_pred EEEEeCCCcEEEECCCCeEEecCCCC
Confidence 45668999999999999966655443
No 484
>KOG4408 consensus Putative Mg2+ and Co2+ transporter CorD [Inorganic ion transport and metabolism]
Probab=56.95 E-value=2.3 Score=48.19 Aligned_cols=49 Identities=29% Similarity=0.392 Sum_probs=44.9
Q ss_pred CCCCCHHHHHHHHhcCCHHHHHHHHHHhHHHHHHccCchhHHHHHHhhc
Q 002043 21 LKIIPDEIICSILEHLTPRDVGRLACVSSVMYIFCNEEPLWMSLCLKKA 69 (976)
Q Consensus 21 l~~LPdEll~~Ils~L~~~dL~~L~~vsr~fy~~~~~d~LWr~~~~~~~ 69 (976)
+.-+|+.++..+++++.++++.+.++|+|++-+..+++.+|...|.+.+
T Consensus 8 le~~~~~~l~~vls~~~~~~~~~~a~vs~rLk~~~s~~~lw~r~c~k~l 56 (386)
T KOG4408|consen 8 LEWLPRDPLHLVLSFLLYRDLINCAYVSRRLKELGSHLPLWNRPCKKYL 56 (386)
T ss_pred hhhcccccceeeecccchhhhhcceeechHHhhhhhccccccccccccc
Confidence 4458889999999999999999999999999999999999999996655
No 485
>PF01050 MannoseP_isomer: Mannose-6-phosphate isomerase; InterPro: IPR001538 Mannose-6-phosphate isomerase or phosphomannose isomerase (5.3.1.8 from EC) (PMI) is the enzyme that catalyses the interconversion of mannose-6-phosphate and fructose-6-phosphate. In eukaryotes PMI is involved in the synthesis of GDP-mannose, a constituent of N- and O-linked glycans and GPI anchors and in prokaryotes it participates in a variety of pathways, including capsular polysaccharide biosynthesis and D-mannose metabolism. PMI's belong to the cupin superfamily whose functions range from isomerase and epimerase activities involved in the modification of cell wall carbohydrates in bacteria and plants, to non-enzymatic storage proteins in plant seeds, and transcription factors linked to congenital baldness in mammals []. Three classes of PMI have been defined []. The type II phosphomannose isomerases are bifunctional enzymes 5.3.1.8 from EC. This entry covers the isomerase region of the protein []. The guanosine diphospho-D-mannose pyrophosphorylase region is described in another InterPro entry (see IPR005836 from INTERPRO).; GO: 0016779 nucleotidyltransferase activity, 0005976 polysaccharide metabolic process
Probab=56.95 E-value=12 Score=38.24 Aligned_cols=26 Identities=31% Similarity=0.348 Sum_probs=22.6
Q ss_pred EEEEEcCCCEEEeCCCCceeeEecCC
Q 002043 333 IECTQLPGETIVVPSGWWHCILNLET 358 (976)
Q Consensus 333 ~e~vL~PGDvLfVP~GWWH~V~NLd~ 358 (976)
-...+.+||.+|||.|-.|.+.|.+.
T Consensus 102 ~~~~~~~g~sv~Ip~g~~H~i~n~g~ 127 (151)
T PF01050_consen 102 EEFTLKEGDSVYIPRGAKHRIENPGK 127 (151)
T ss_pred EEEEEcCCCEEEECCCCEEEEECCCC
Confidence 34568899999999999999999864
No 486
>KOG0666 consensus Cyclin C-dependent kinase CDK8 [Transcription]
Probab=56.36 E-value=8.1 Score=43.86 Aligned_cols=19 Identities=16% Similarity=0.144 Sum_probs=15.8
Q ss_pred CCeEEecCCCCCCeEEccC
Q 002043 812 PCSWIHSDIMDDNVYMEPC 830 (976)
Q Consensus 812 ~pv~iHgDl~~~NILv~~~ 830 (976)
..=.+|.||+|.||||..+
T Consensus 150 ~NWvlHRDLKPaNIlvmgd 168 (438)
T KOG0666|consen 150 SNWVLHRDLKPANILVMGD 168 (438)
T ss_pred hhheeeccCCcceEEEecc
Confidence 4566999999999999753
No 487
>cd05076 PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalyt
Probab=56.32 E-value=17 Score=39.38 Aligned_cols=43 Identities=9% Similarity=-0.058 Sum_probs=37.0
Q ss_pred ccEEEEecccCccchhhh----hcCCHHHHHHHHHHHHHHHHHhhCC
Q 002043 672 WPYIITKRCKGKMFAQLR----DALSGEDVLNLASFLGEQLRNLHLL 714 (976)
Q Consensus 672 WpYiVm~rl~G~~l~~v~----~~Ls~ed~~~La~~LG~~L~~LHsi 714 (976)
..|+||++++|.+|.... ..++......++.++.+-|..||+.
T Consensus 90 ~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~ 136 (274)
T cd05076 90 ENIMVEEFVEHGPLDVCLRKEKGRVPVAWKITVAQQLASALSYLEDK 136 (274)
T ss_pred ceEEEEecCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHcC
Confidence 679999999999987654 2478889999999999999999953
No 488
>KOG1035 consensus eIF-2alpha kinase GCN2 [Translation, ribosomal structure and biogenesis]
Probab=55.39 E-value=7.1 Score=51.05 Aligned_cols=19 Identities=21% Similarity=0.459 Sum_probs=16.2
Q ss_pred CCeEEecCCCCCCeEEccC
Q 002043 812 PCSWIHSDIMDDNVYMEPC 830 (976)
Q Consensus 812 ~pv~iHgDl~~~NILv~~~ 830 (976)
.-.+||.||+|.||+.++.
T Consensus 715 ~~giIHRDLKP~NIFLd~~ 733 (1351)
T KOG1035|consen 715 DQGIIHRDLKPRNIFLDSR 733 (1351)
T ss_pred hCceeeccCCcceeEEcCC
Confidence 3459999999999999864
No 489
>COG1898 RfbC dTDP-4-dehydrorhamnose 3,5-epimerase and related enzymes [Cell envelope biogenesis, outer membrane]
Probab=55.36 E-value=73 Score=33.42 Aligned_cols=79 Identities=11% Similarity=0.064 Sum_probs=49.7
Q ss_pred ceEEeecCCCCCcccccCCCCcccEEEEEEEEEEEEeCCCCCCCcceeeecCCCCCccccCCcchhhhhhhCCCCCCCCC
Q 002043 252 RWVIIGPQRSGASWHVDPALTSAWNTLLCGRKRWALYPPGRVPLGVTVHVNEDDGDVNIETPSSLEWWLDFYPLLADDDK 331 (976)
Q Consensus 252 rwL~iGp~gSgT~lH~Dp~~t~awn~qI~GrKrW~LfPP~~~p~~v~~~~~~~~s~vd~~~Pdsl~W~l~~yP~l~~~~~ 331 (976)
.++.++.+|..-.+|++.-.-.=..+++.|+=.-+++... -++|+ +. +
T Consensus 47 ~n~S~S~~GvlRGlHyq~~~q~klv~~v~G~v~dv~vDlR------------------~~SpT-----------yg---~ 94 (173)
T COG1898 47 DNHSFSYPGVLRGLHYQHKPQGKLVRVVSGKVFDVAVDLR------------------KDSPT-----------YG---K 94 (173)
T ss_pred ceEEEecCCeeEEEEcccCCCCeEEEEecCeEEEEEEEcc------------------CCCCC-----------cc---e
Confidence 3566777888889999876411244555665444433221 12232 11 2
Q ss_pred CEEEEEcCC--CEEEeCCCCceeeEecCCcEEE
Q 002043 332 PIECTQLPG--ETIVVPSGWWHCILNLETTIAV 362 (976)
Q Consensus 332 ~~e~vL~PG--DvLfVP~GWWH~V~NLd~SISV 362 (976)
-..+++.+- .+|+||+|+.|-..+|+++..+
T Consensus 95 ~~~~~ls~~N~~~l~IP~G~AHGf~~L~d~~~~ 127 (173)
T COG1898 95 WVGVVLSAENKRQLYIPPGFAHGFQVLSDDAEV 127 (173)
T ss_pred EEEEEecCCCceEEEeCCcccceeEEccCceEE
Confidence 244556554 8999999999999999987733
No 490
>KOG1006 consensus Mitogen-activated protein kinase (MAPK) kinase MKK4 [Signal transduction mechanisms]
Probab=54.32 E-value=14 Score=41.31 Aligned_cols=43 Identities=21% Similarity=0.416 Sum_probs=27.3
Q ss_pred CCCCHHHHHHHhhhCChhHHHHhhhhhhccCCccCCCCCeEEecCCCCCCeEEccC
Q 002043 775 HPIPKALIDKVDEYIPDDFVKLLDIYQDENGLNKVCKPCSWIHSDIMDDNVYMEPC 830 (976)
Q Consensus 775 ~~lp~~l~e~l~~ylp~d~~~ll~~~~~e~~~~~~~~~pv~iHgDl~~~NILv~~~ 830 (976)
..||..++..+.--. ...++.++. .--.||.|++|.|||++..
T Consensus 162 ~~ipE~Ilg~Itvat----V~AL~yLK~---------~lkiIHRDvKPSNILldr~ 204 (361)
T KOG1006|consen 162 SRIPENILGHITVAT----VDALDYLKE---------ELKIIHRDVKPSNILLDRH 204 (361)
T ss_pred ccCcHhhhhheeeee----hhHHHHHHH---------HhhhhhccCChhheEEecC
Confidence 467766655543322 222344332 4567999999999999874
No 491
>KOG0659 consensus Cdk activating kinase (CAK)/RNA polymerase II transcription initiation/nucleotide excision repair factor TFIIH/TFIIK, kinase subunit CDK7 [Cell cycle control, cell division, chromosome partitioning; Transcription; Replication, recombination and repair]
Probab=53.28 E-value=8.9 Score=42.73 Aligned_cols=19 Identities=16% Similarity=0.317 Sum_probs=16.1
Q ss_pred CCCeEEecCCCCCCeEEcc
Q 002043 811 KPCSWIHSDIMDDNVYMEP 829 (976)
Q Consensus 811 ~~pv~iHgDl~~~NILv~~ 829 (976)
..-=++|.|++|.|+|+.+
T Consensus 118 H~~~IlHRDlKPnNLLis~ 136 (318)
T KOG0659|consen 118 HSKWILHRDLKPNNLLISS 136 (318)
T ss_pred HhhhhhcccCCccceEEcC
Confidence 4556799999999999975
No 492
>PF00908 dTDP_sugar_isom: dTDP-4-dehydrorhamnose 3,5-epimerase; InterPro: IPR000888 Deoxythymidine diphosphate (dTDP)-4-keto-6-deoxy-d-hexulose 3, 5-epimerase (RmlC, 5.1.3.13 from EC) is involved in the biosynthesis of dTDP-l-rhamnose, which is an essential component of the bacterial cell wall, converting dTDP-4-keto-6-deoxy-D-glucose to dTDP-4-keto-L-rhamnose. The crystal structure of RmlC from Methanobacterium thermoautotrophicum was determined in the presence and absence of a substrate analogue. RmlC is a homodimer comprising a central jelly roll motif, which extends in two directions into longer beta-sheets. Binding of dTDP is stabilised by ionic interactions to the phosphate group and by a combination of ionic and hydrophobic interactions with the base. The active site, which is located in the centre of the jelly roll, is formed by residues that are conserved in all known RmlC sequence homologues. The active site is lined with a number of charged residues and a number of residues with hydrogen-bonding potentials, which together comprise a potential network for substrate binding and catalysis. The active site is also lined with aromatic residues which provide favorable environments for the base moiety of dTDP and potentially for the sugar moiety of the substrate [].; GO: 0008830 dTDP-4-dehydrorhamnose 3,5-epimerase activity, 0009103 lipopolysaccharide biosynthetic process; PDB: 1EPZ_A 1EP0_A 1NXM_A 1NZC_D 2IXL_C 1NYW_B 2IXC_D 1PM7_B 1UPI_A 3RYK_B ....
Probab=52.79 E-value=32 Score=36.06 Aligned_cols=80 Identities=14% Similarity=0.086 Sum_probs=49.3
Q ss_pred eEEeecCCCCCcccccCCC-C-cccEEEEEEEEEEEEeCCCCCCCcceeeecCCCCCccccCCcchhhhhhhCCCCCCCC
Q 002043 253 WVIIGPQRSGASWHVDPAL-T-SAWNTLLCGRKRWALYPPGRVPLGVTVHVNEDDGDVNIETPSSLEWWLDFYPLLADDD 330 (976)
Q Consensus 253 wL~iGp~gSgT~lH~Dp~~-t-~awn~qI~GrKrW~LfPP~~~p~~v~~~~~~~~s~vd~~~Pdsl~W~l~~yP~l~~~~ 330 (976)
++....+|+.-.+|+.... . .=+..+++|+=.-+++... .++|+ + .
T Consensus 46 n~S~s~~gvlRGlH~q~~~~~q~Klv~~~~G~i~dV~vDlR------------------~~SpT-----------f---g 93 (176)
T PF00908_consen 46 NISVSKKGVLRGLHYQSPPYAQAKLVRCLRGEIFDVAVDLR------------------KGSPT-----------F---G 93 (176)
T ss_dssp EEEEEETTBEEEEEEESTTT-EEEEEEEEESEEEEEEEE-B------------------TTSTT-----------T---T
T ss_pred EEEEccccEEEEEEEecCCCCCCcEEEEecCeEEEEEEECC------------------CCCCC-----------C---C
Confidence 4556667777789997753 0 1255566776444443211 12333 2 1
Q ss_pred CCEEEEEcCCC--EEEeCCCCceeeEecCCcEEEee
Q 002043 331 KPIECTQLPGE--TIVVPSGWWHCILNLETTIAVTQ 364 (976)
Q Consensus 331 ~~~e~vL~PGD--vLfVP~GWWH~V~NLd~SISVt~ 364 (976)
+...++|.+++ .||||+|.+|-..++++.-.|..
T Consensus 94 ~~~~~~Ls~~n~~~l~IP~G~aHGf~~l~d~a~v~Y 129 (176)
T PF00908_consen 94 KWVSVELSAENPRQLYIPPGVAHGFQTLEDDAEVLY 129 (176)
T ss_dssp -EEEEEEETTT--EEEE-TTEEEEEEESSSEEEEEE
T ss_pred EEEEEEeCccccCEEEeCCcceeeEEeccCceEEEE
Confidence 34677887776 79999999999999998644443
No 493
>TIGR03214 ura-cupin putative allantoin catabolism protein. This model represents a protein containing a tandem arrangement of cupin domains (N-terminal part of pfam07883 and C-terminal more distantly related to pfam00190). This protein is found in the vicinity of genes involved in the catabolism of allantoin, a breakdown product of urate and sometimes of urate iteslf. The distribution of pathway components in the genomes in which this family is observed suggests that the function is linked to the allantoate catabolism to glyoxylate pathway (GenProp0686) since it is sometimes found in genomes lacking any elements of the xanthine-to-allantoin pathways (e.g. in Enterococcus faecalis).
Probab=52.76 E-value=14 Score=40.88 Aligned_cols=26 Identities=8% Similarity=-0.204 Sum_probs=23.3
Q ss_pred EEEEEcCCCEEEeCCCCceeeEecCC
Q 002043 333 IECTQLPGETIVVPSGWWHCILNLET 358 (976)
Q Consensus 333 ~e~vL~PGDvLfVP~GWWH~V~NLd~ 358 (976)
-...++|||++|||++..|+..|.++
T Consensus 218 ~~~~V~~GD~i~i~~~~~h~~~~~G~ 243 (260)
T TIGR03214 218 NWVPVEAGDYIWMGAYCPQACYAGGR 243 (260)
T ss_pred EEEEecCCCEEEECCCCCEEEEecCC
Confidence 45678999999999999999999875
No 494
>KOG0194 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=51.31 E-value=25 Score=42.42 Aligned_cols=36 Identities=28% Similarity=0.331 Sum_probs=28.2
Q ss_pred eEEecCCCCCCeEEccCCcccCCCCCCCCCCCccCCCCCCCCccCcCccceeeEEEeCCCCCCCCcccch
Q 002043 814 SWIHSDIMDDNVYMEPCCASSRSNGNAADTGPMVNGSINGYDEFGEAKSWHCSHIIDFSNLSIGDPIYDV 883 (976)
Q Consensus 814 v~iHgDl~~~NILv~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~~~~~~w~~sGIIDFgd~~iGDP~~Dl 883 (976)
-.||.||-..|.|+..+ .+.=|=|||-+..|+ -|+.
T Consensus 282 ~~IHRDIAARNcL~~~~---------------------------------~~vKISDFGLs~~~~-~~~~ 317 (474)
T KOG0194|consen 282 NCIHRDIAARNCLYSKK---------------------------------GVVKISDFGLSRAGS-QYVM 317 (474)
T ss_pred CCcchhHhHHHheecCC---------------------------------CeEEeCccccccCCc-ceee
Confidence 34999999999999652 356888999999998 4443
No 495
>PF07714 Pkinase_Tyr: Protein tyrosine kinase Protein kinase; unclassified specificity. Tyrosine kinase, catalytic domain; InterPro: IPR001245 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Tyrosine-protein kinases can transfer a phosphate group from ATP to a tyrosine residue in a protein. These enzymes can be divided into two main groups []: Receptor tyrosine kinases (RTK), which are transmembrane proteins involved in signal transduction; they play key roles in growth, differentiation, metabolism, adhesion, motility, death and oncogenesis []. RTKs are composed of 3 domains: an extracellular domain (binds ligand), a transmembrane (TM) domain, and an intracellular catalytic domain (phosphorylates substrate). The TM domain plays an important role in the dimerisation process necessary for signal transduction []. Cytoplasmic / non-receptor tyrosine kinases, which act as regulatory proteins, playing key roles in cell differentiation, motility, proliferation, and survival. For example, the Src-family of protein-tyrosine kinases []. ; GO: 0004672 protein kinase activity, 0006468 protein phosphorylation; PDB: 2HYY_C 1OPL_A 2V7A_A 2G2H_B 2G1T_A 3PYY_A 3CS9_D 2HZI_A 2E2B_A 2HIW_A ....
Probab=51.05 E-value=37 Score=36.49 Aligned_cols=41 Identities=24% Similarity=0.427 Sum_probs=33.7
Q ss_pred cEEEEecccCccchhhhh-----cCCHHHHHHHHHHHHHHHHHhhC
Q 002043 673 PYIITKRCKGKMFAQLRD-----ALSGEDVLNLASFLGEQLRNLHL 713 (976)
Q Consensus 673 pYiVm~rl~G~~l~~v~~-----~Ls~ed~~~La~~LG~~L~~LHs 713 (976)
.++||+++++-+|.+... .++...+..++.++++-|.-||+
T Consensus 76 ~~lv~e~~~~g~L~~~L~~~~~~~~~~~~~~~i~~~i~~~l~~Lh~ 121 (259)
T PF07714_consen 76 LFLVMEYCPGGSLDDYLKSKNKEPLSEQQRLSIAIQIAEALSYLHS 121 (259)
T ss_dssp EEEEEE--TTEBHHHHHHHTCTTTSBHHHHHHHHHHHHHHHHHHHH
T ss_pred cccccccccccccccccccccccccccccccccccccccccccccc
Confidence 799999999988886433 47789999999999999999994
No 496
>KOG0598 consensus Ribosomal protein S6 kinase and related proteins [General function prediction only; Signal transduction mechanisms]
Probab=50.12 E-value=9.2 Score=44.04 Aligned_cols=19 Identities=16% Similarity=0.272 Sum_probs=16.0
Q ss_pred CCeEEecCCCCCCeEEccC
Q 002043 812 PCSWIHSDIMDDNVYMEPC 830 (976)
Q Consensus 812 ~pv~iHgDl~~~NILv~~~ 830 (976)
.--+||+||+|+|||++..
T Consensus 143 ~~gIiyRDlKPENILLd~~ 161 (357)
T KOG0598|consen 143 SKGIIYRDLKPENILLDEQ 161 (357)
T ss_pred hCCeeeccCCHHHeeecCC
Confidence 3567999999999999763
No 497
>KOG0579 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]
Probab=49.98 E-value=15 Score=45.17 Aligned_cols=19 Identities=21% Similarity=0.298 Sum_probs=16.0
Q ss_pred CCeEEecCCCCCCeEEccC
Q 002043 812 PCSWIHSDIMDDNVYMEPC 830 (976)
Q Consensus 812 ~pv~iHgDl~~~NILv~~~ 830 (976)
..-+||.||+.||||+.-+
T Consensus 148 s~~iIHRDLKAGNiL~Tld 166 (1187)
T KOG0579|consen 148 SQNIIHRDLKAGNILLTLD 166 (1187)
T ss_pred hcchhhhhccccceEEEec
Confidence 4567999999999999753
No 498
>KOG2268 consensus Serine/threonine protein kinase [Signal transduction mechanisms; General function prediction only]
Probab=49.90 E-value=64 Score=37.51 Aligned_cols=113 Identities=21% Similarity=0.376 Sum_probs=67.9
Q ss_pred hhHHHHHHHHHHHHHHHHHHhhhcCCCCCHHH-------HHHHhhhCC-------hhHHHH----hhhhhhccCCccCCC
Q 002043 750 AEWEIFIRTLARKKKNLVNRLTAWGHPIPKAL-------IDKVDEYIP-------DDFVKL----LDIYQDENGLNKVCK 811 (976)
Q Consensus 750 ~~W~~~~~~l~~r~~~~~~~~~~wg~~lp~~l-------~e~l~~ylp-------~d~~~l----l~~~~~e~~~~~~~~ 811 (976)
..|-..-+.-+.|.-+.++.+..-|-|+|.++ +..+.+++| .|+..+ +..+.. -.
T Consensus 147 ~sWlyLSRlaa~kEfafmkaL~e~gfpVPkpiD~~RH~Vvmelv~g~Pl~~v~~v~d~~~ly~~lm~~Iv~-------la 219 (465)
T KOG2268|consen 147 GSWLYLSRLAATKEFAFMKALYERGFPVPKPIDHNRHCVVMELVDGYPLRQVRHVEDPPTLYDDLMGLIVR-------LA 219 (465)
T ss_pred cchhhhHHHHHHHHHHHHHHHHHcCCCCCCcccccceeeHHHhhcccceeeeeecCChHHHHHHHHHHHHH-------HH
Confidence 44865554444455667777777677887642 333344443 111111 111100 12
Q ss_pred CCeEEecCCCCCCeEEccCCcccCCCCCCCCCCCccCCCCCCCCccCcCccceeeEEEeCCC-CCCCCcccchhhhcccc
Q 002043 812 PCSWIHSDIMDDNVYMEPCCASSRSNGNAADTGPMVNGSINGYDEFGEAKSWHCSHIIDFSN-LSIGDPIYDVIPIHLDI 890 (976)
Q Consensus 812 ~pv~iHgDl~~~NILv~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~~~~~~w~~sGIIDFgd-~~iGDP~~Dlv~l~l~~ 890 (976)
.--+|||||.--||+|+++. ++ -+|||=- .++-+|-.++ .
T Consensus 220 ~~GlIHgDFNEFNimv~dd~--------------------------------~i-~vIDFPQmvS~sh~nA~~------Y 260 (465)
T KOG2268|consen 220 NHGLIHGDFNEFNIMVKDDD--------------------------------KI-VVIDFPQMVSTSHPNAEY------Y 260 (465)
T ss_pred HcCceecccchheeEEecCC--------------------------------CE-EEeechHhhccCCCccce------e
Confidence 45689999999999997521 23 6899964 5677888877 4
Q ss_pred cCCChHHHHHHHH-hcCCc
Q 002043 891 FRGDSSLFKQFLE-SYKLP 908 (976)
Q Consensus 891 f~gd~~l~~~fl~-~Y~~~ 908 (976)
|..|.+-.++|++ .|+..
T Consensus 261 FdRDv~Ci~~fFrKkf~YE 279 (465)
T KOG2268|consen 261 FDRDVECIRAFFRKKFGYE 279 (465)
T ss_pred ecccHHHHHHHHHHhcCCC
Confidence 5678876666554 66663
No 499
>KOG0599 consensus Phosphorylase kinase gamma subunit [Carbohydrate transport and metabolism]
Probab=48.32 E-value=8.7 Score=42.88 Aligned_cols=18 Identities=17% Similarity=0.481 Sum_probs=15.4
Q ss_pred CCeEEecCCCCCCeEEcc
Q 002043 812 PCSWIHSDIMDDNVYMEP 829 (976)
Q Consensus 812 ~pv~iHgDl~~~NILv~~ 829 (976)
.--++|.||+|+|||.++
T Consensus 141 a~~IVHRDLKpENILldd 158 (411)
T KOG0599|consen 141 ARNIVHRDLKPENILLDD 158 (411)
T ss_pred HhhhhhcccChhheeecc
Confidence 345799999999999976
No 500
>PF05899 Cupin_3: Protein of unknown function (DUF861); InterPro: IPR008579 The function of the proteins in this entry are unknown. They contain the conserved barrel domain of the 'cupin' superfamily and members are specific to plants and bacteria.; PDB: 1RC6_A 3MYX_A 1O5U_A 2K9Z_A 1LKN_A 3ES4_A 1SFN_B 3BCW_A.
Probab=47.66 E-value=11 Score=33.55 Aligned_cols=17 Identities=29% Similarity=0.718 Sum_probs=14.1
Q ss_pred EEEEEcCCCEEEeCCCC
Q 002043 333 IECTQLPGETIVVPSGW 349 (976)
Q Consensus 333 ~e~vL~PGDvLfVP~GW 349 (976)
-...+.|||++|+|+||
T Consensus 44 ~~~~~~aGD~~~~p~G~ 60 (74)
T PF05899_consen 44 ETVTFKAGDAFFLPKGW 60 (74)
T ss_dssp EEEEEETTEEEEE-TTE
T ss_pred CEEEEcCCcEEEECCCC
Confidence 45779999999999999
Done!