Your job contains 1 sequence.
>002045
MYSKRSGQGDGSVPGPVRTSDRLRRRPKILGRTYLYYNPIRPRKSKTKARTAASQIARMF
GPGKRTVRTSNKNSVPLNLRRSTRKRRISVNLEDYTDSSGSEDEDLMRPSYRPLRNRMRN
NMSQDELSPSKRKKVVEAKPTPRREGLRPRRSMVATRKQLNLDSGDEQGSSEEKVGQDET
ENGNESDNDADDGQNEIEGDGEAEAEDEGEGEDEEDGDDEEGEEEQEGRRRYDLRNRAEV
RRLSVEEGKQRPRSPRRVLHQGIGTKVGRDVRKGGSRVLKRHRLARAEDSDDSLLVDELD
QGPAIPWGRGGSRSGPPWLFGGLEMHGTTAWGLNVAASGWGHQGDTLAALTSGIQTAGPS
SKGGADIQPLQVDESVSFDDIGGLSEYIDALKEMVFFPLLYPDFFASYHITPPRGVLLCG
PPGTGKTLIARALACAASKAGQKVSFYMRKGADVLSKWVGEAERQLKLLFEEAQRNQPSI
IFFDEIDGLAPVRSSKQEQIHNSIVSTLLALMDGLDSRGQVVLIGATNRVDAIDGALRRP
GRFDREFNFPLPGCEARAEILDIHTRKWKQPPSRELKSELAASCVGYCGADLKALCTEAA
IRAFREKYPQVYTSDDKFLIDVDSVTVEKYHFIEAMSTITPAAHRGATVHSRPLSLVVAP
CLQRHLQKAMNYISDIFPPLGMSSELTKLCMLSHGSAIPLVYRPRLLLCGSEGTGVDHLG
PAILHELEKFPVHSLGLPALLSDPSAKTPEEALVHIFGEARRTTPSILYIPQFNLWWENA
HEQLRAVLLTLLEELPSHLPILLLGSSSVPLAEVEGDPSTVFPLRSVYQVEKPSTEDRSL
FLGRLIEAAVSVVLEGRSKKPQESVSLPELPKVPTVESGPKASELKAKVEAEQHALRRLR
MCLRDVCNRMLYDKRFSAFHYPVTDEDAPNYRSIIQNPMDLATLLQRVDSGHYVTCSAFL
QDVDLIVTNAKVSTCA
The BLAST search returned 2 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 002045
(976 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2198748 - symbol:AT1G05910 species:3702 "Arabi... 3467 0. 1
UNIPROTKB|E2RRW1 - symbol:ATAD2 "Uncharacterized protein"... 996 1.6e-154 4
ZFIN|ZDB-GENE-030131-5754 - symbol:wu:fi16e04 "wu:fi16e04... 994 1.8e-154 3
UNIPROTKB|F1RR16 - symbol:ATAD2 "Uncharacterized protein"... 999 1.3e-151 3
UNIPROTKB|E1BC78 - symbol:ATAD2 "Uncharacterized protein"... 982 2.9e-151 4
UNIPROTKB|F1MEU3 - symbol:ATAD2B "Uncharacterized protein... 985 1.1e-150 3
UNIPROTKB|J9NU31 - symbol:ATAD2B "Uncharacterized protein... 985 4.9e-150 3
UNIPROTKB|E9PSU0 - symbol:LOC500625 "Protein LOC500625" s... 986 6.0e-150 3
UNIPROTKB|Q9ULI0 - symbol:ATAD2B "ATPase family AAA domai... 985 1.6e-149 3
UNIPROTKB|Q6PL18 - symbol:ATAD2 "ATPase family AAA domain... 998 2.2e-149 3
ZFIN|ZDB-GENE-110411-210 - symbol:atad2b "ATPase family, ... 966 4.0e-149 5
UNIPROTKB|F1P871 - symbol:ATAD2B "Uncharacterized protein... 985 1.0e-148 3
UNIPROTKB|F1MEY1 - symbol:ATAD2B "Uncharacterized protein... 985 1.0e-148 3
UNIPROTKB|F1NN52 - symbol:F1NN52 "Uncharacterized protein... 988 5.3e-147 2
DICTYBASE|DDB_G0281521 - symbol:DDB_G0281521 "BRAT group ... 987 8.4e-140 4
SGD|S000003502 - symbol:YTA7 "Protein that localizes to c... 967 5.6e-128 4
POMBASE|SPAC31G5.19 - symbol:abo1 "ATPase with bromodomai... 1177 1.5e-126 3
RGD|1304849 - symbol:Atad2 "ATPase family, AAA domain con... 794 2.1e-125 3
CGD|CAL0002985 - symbol:orf19.3949 species:5476 "Candida ... 942 1.1e-123 4
ASPGD|ASPL0000044770 - symbol:AN10191 species:162425 "Eme... 1144 1.4e-120 2
UNIPROTKB|G4N7L8 - symbol:MGG_06380 "ATPase family AAA do... 1110 2.5e-120 3
WB|WBGene00008682 - symbol:lex-1 species:6239 "Caenorhabd... 1098 1.8e-116 2
UNIPROTKB|P54816 - symbol:lex-1 "Tat-binding homolog 7" s... 1098 1.8e-116 2
POMBASE|SPBP22H7.05c - symbol:abo2 "ATPase with bromodoma... 1001 1.9e-108 3
MGI|MGI:1917722 - symbol:Atad2 "ATPase family, AAA domain... 991 1.1e-103 2
TAIR|locus:2083681 - symbol:AT3G15120 species:3702 "Arabi... 730 2.3e-78 3
UNIPROTKB|F1NUE7 - symbol:F1NUE7 "Uncharacterized protein... 703 2.4e-75 3
UNIPROTKB|D4A9R0 - symbol:LOC500625 "Protein LOC500625" s... 708 1.2e-73 2
WB|WBGene00007352 - symbol:cdc-48.1 species:6239 "Caenorh... 599 6.8e-58 1
UNIPROTKB|P54811 - symbol:cdc-48.1 "Transitional endoplas... 599 6.8e-58 1
TAIR|locus:2831844 - symbol:AtCDC48C "cell division cycle... 598 8.8e-58 1
DICTYBASE|DDB_G0288065 - symbol:cdcD "CDC48 family AAA AT... 595 1.9e-57 1
TAIR|locus:2085064 - symbol:CDC48 "cell division cycle 48... 595 3.8e-57 1
WB|WBGene00008053 - symbol:cdc-48.2 species:6239 "Caenorh... 593 1.9e-56 1
UNIPROTKB|P54812 - symbol:cdc-48.2 "Transitional endoplas... 593 1.9e-56 1
ZFIN|ZDB-GENE-060312-22 - symbol:zgc:136908 "zgc:136908" ... 586 2.7e-56 2
TAIR|locus:2101933 - symbol:AtCDC48B "AT3G53230" species:... 593 3.5e-56 1
GENEDB_PFALCIPARUM|PFF0940c - symbol:PFF0940c "cell divis... 595 4.0e-56 1
UNIPROTKB|C6KT34 - symbol:PFF0940c "Cell division cycle p... 595 4.0e-56 1
SGD|S000002284 - symbol:CDC48 "AAA ATPase involved in mul... 587 5.8e-55 1
UNIPROTKB|G4N517 - symbol:MGG_05193 "Cell division contro... 580 3.0e-54 1
ZFIN|ZDB-GENE-030131-5408 - symbol:vcp "valosin containin... 575 8.4e-54 1
FB|FBgn0261014 - symbol:TER94 "TER94" species:7227 "Droso... 573 1.3e-53 1
UNIPROTKB|G3X757 - symbol:VCP "Transitional endoplasmic r... 573 1.6e-53 1
UNIPROTKB|Q3ZBT1 - symbol:VCP "Transitional endoplasmic r... 573 1.6e-53 1
UNIPROTKB|P55072 - symbol:VCP "Transitional endoplasmic r... 573 1.6e-53 1
MGI|MGI:99919 - symbol:Vcp "valosin containing protein" s... 573 1.6e-53 1
RGD|621595 - symbol:Vcp "valosin-containing protein" spec... 573 1.6e-53 1
UNIPROTKB|F1SIH8 - symbol:VCP "Transitional endoplasmic r... 573 1.7e-53 1
UNIPROTKB|Q6GL04 - symbol:vcp "Transitional endoplasmic r... 572 2.0e-53 1
UNIPROTKB|P23787 - symbol:vcp "Transitional endoplasmic r... 572 2.0e-53 1
UNIPROTKB|E2RLQ9 - symbol:VCP "Uncharacterized protein" s... 573 2.4e-53 1
UNIPROTKB|P03974 - symbol:VCP "Transitional endoplasmic r... 571 2.7e-53 1
ASPGD|ASPL0000069340 - symbol:AN7254 species:162425 "Emer... 569 9.9e-53 2
POMBASE|SPAC1565.08 - symbol:cdc48 "AAA family ATPase Cdc... 564 2.6e-52 1
CGD|CAL0000732 - symbol:CDC48 species:5476 "Candida albic... 562 5.6e-52 1
UNIPROTKB|Q59WG3 - symbol:CDC48 "Putative uncharacterized... 562 5.6e-52 1
UNIPROTKB|F1NLN4 - symbol:SPATA5 "Uncharacterized protein... 535 8.0e-51 1
UNIPROTKB|F1MFP1 - symbol:SPATA5 "Uncharacterized protein... 544 2.7e-50 1
UNIPROTKB|F1P4V8 - symbol:LOC426240 "Uncharacterized prot... 544 6.0e-50 1
UNIPROTKB|F1RQN5 - symbol:SPATA5 "Uncharacterized protein... 539 2.1e-49 2
UNIPROTKB|F1SCW5 - symbol:F1SCW5 "Uncharacterized protein... 499 6.4e-49 2
UNIPROTKB|E2RC37 - symbol:SPATA5 "Uncharacterized protein... 534 1.7e-48 1
MGI|MGI:1927170 - symbol:Spata5 "spermatogenesis associat... 521 5.0e-47 1
UNIPROTKB|H7C475 - symbol:ATAD2B "ATPase family AAA domai... 500 5.2e-47 1
UNIPROTKB|Q8NB90 - symbol:SPATA5 "Spermatogenesis-associa... 527 6.3e-47 2
RGD|1310478 - symbol:Spata5 "spermatogenesis associated 5... 519 2.8e-46 2
UNIPROTKB|Q58576 - symbol:pan "Proteasome-activating nucl... 486 1.7e-45 1
CGD|CAL0002187 - symbol:orf19.6432 species:5476 "Candida ... 498 2.3e-45 2
GENEDB_PFALCIPARUM|PF07_0047 - symbol:PF07_0047 "cell div... 497 1.5e-44 3
UNIPROTKB|P46468 - symbol:PF07_0047 "Putative cell divisi... 497 1.5e-44 3
GENEDB_PFALCIPARUM|PF10_0081 - symbol:PF10_0081 "26S prot... 450 5.7e-44 2
UNIPROTKB|Q8IJW0 - symbol:PF10_0081 "26S proteasome regul... 450 5.7e-44 2
FB|FBgn0015282 - symbol:Rpt2 "Regulatory particle triple-... 451 7.2e-44 2
DICTYBASE|DDB_G0276917 - symbol:psmC2 "26S proteasome ATP... 468 1.5e-43 1
UNIPROTKB|Q5R8D7 - symbol:PSMC2 "26S protease regulatory ... 461 8.7e-43 1
SGD|S000004389 - symbol:AFG2 "ATPase of the CDC48/PAS1/SE... 478 1.0e-42 2
UNIPROTKB|F1NSP7 - symbol:PSMC1 "26S protease regulatory ... 446 1.4e-42 2
UNIPROTKB|F1NTZ4 - symbol:PSMC1 "26S protease regulatory ... 446 1.4e-42 2
UNIPROTKB|Q90732 - symbol:PSMC1 "26S protease regulatory ... 446 1.7e-42 2
UNIPROTKB|P46472 - symbol:psmc2 "26S protease regulatory ... 458 1.8e-42 1
ASPGD|ASPL0000034636 - symbol:AN2917 species:162425 "Emer... 440 1.8e-42 2
POMBASE|SPBC56F2.07c - symbol:SPBC56F2.07c "ribosome biog... 468 2.1e-42 3
UNIPROTKB|E1C4V5 - symbol:PSMC2 "Uncharacterized protein"... 457 2.3e-42 1
UNIPROTKB|F1NFL8 - symbol:PSMC2 "Uncharacterized protein"... 457 2.3e-42 1
UNIPROTKB|Q5E9F9 - symbol:PSMC2 "26S protease regulatory ... 457 2.3e-42 1
UNIPROTKB|F1PPH7 - symbol:PSMC2 "Uncharacterized protein"... 457 2.3e-42 1
UNIPROTKB|B7Z5E2 - symbol:PSMC2 "cDNA FLJ52353, highly si... 457 2.3e-42 1
UNIPROTKB|P35998 - symbol:PSMC2 "26S protease regulatory ... 457 2.3e-42 1
UNIPROTKB|F1SB53 - symbol:PSMC2 "Uncharacterized protein"... 457 2.3e-42 1
UNIPROTKB|I3LJ30 - symbol:I3LJ30 "Uncharacterized protein... 457 2.3e-42 1
UNIPROTKB|Q4R4R0 - symbol:PSMC2 "26S protease regulatory ... 457 2.3e-42 1
MGI|MGI:109555 - symbol:Psmc2 "proteasome (prosome, macro... 457 2.3e-42 1
ZFIN|ZDB-GENE-040426-1327 - symbol:psmc2 "proteasome (pro... 457 2.3e-42 1
SGD|S000001628 - symbol:RPT1 "ATPase of the 19S regulator... 443 2.9e-42 2
UNIPROTKB|A4FUZ3 - symbol:PSMC1 "Proteasome (Prosome, mac... 443 2.9e-42 2
UNIPROTKB|F1PQ40 - symbol:PSMC1 "Uncharacterized protein"... 443 2.9e-42 2
UNIPROTKB|B4DR63 - symbol:PSMC1 "cDNA FLJ58247, highly si... 443 2.9e-42 2
UNIPROTKB|P62191 - symbol:PSMC1 "26S protease regulatory ... 443 2.9e-42 2
UNIPROTKB|F2Z5J1 - symbol:PSMC1 "Uncharacterized protein"... 443 2.9e-42 2
WARNING: Descriptions of 610 database sequences were not reported due to the
limiting value of parameter V = 100.
>TAIR|locus:2198748 [details] [associations]
symbol:AT1G05910 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR001487 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 Pfam:PF00439 PRINTS:PR00503
PROSITE:PS00674 PROSITE:PS50014 SMART:SM00297 SMART:SM00382
EMBL:CP002684 GO:GO:0005524 eggNOG:COG0464 GO:GO:0017111
Gene3D:1.20.920.10 SUPFAM:SSF47370 PROSITE:PS00633 EMBL:AC009999
OMA:QDETENG EMBL:AY056785 EMBL:BT002728 IPI:IPI00523133
IPI:IPI00542285 PIR:B86194 RefSeq:NP_563753.1 UniGene:At.26297
ProteinModelPortal:F4IAE9 SMR:F4IAE9 PRIDE:F4IAE9
EnsemblPlants:AT1G05910.1 GeneID:837101 KEGG:ath:AT1G05910
GeneFarm:1906 TAIR:At1g05910 HOGENOM:HOG000030246 Uniprot:F4IAE9
Length = 1210
Score = 3467 (1225.5 bits), Expect = 0., P = 0.
Identities = 699/979 (71%), Positives = 770/979 (78%)
Query: 1 MYSKRSGQGDGSVPGPVRTSDRLRRRPKILGRTYLYY---NPIRPRKSKTKARTAASQIA 57
M+ KRS QGDGSV PVRTSDRLRRRPK+ GR+YLYY N + RK TK RTAASQIA
Sbjct: 1 MHPKRSSQGDGSVTKPVRTSDRLRRRPKLHGRSYLYYSSPNMLHNRKRNTKTRTAASQIA 60
Query: 58 RMFGPGKRTVRTSNKNSVPLNLRRSTRKRRISVNLEDYTDSSGSEDEDLMRPSYRPLRNR 117
+M G R R SN + +LRRSTRKRRISVNLEDYTDSSG+EDED+M P+YR LR R
Sbjct: 61 KMLHKGNRPARASNAAPIASDLRRSTRKRRISVNLEDYTDSSGAEDEDMMSPAYRTLRRR 120
Query: 118 MRNNMSQDELSPSKRKKVVEAKPTPRREGLRPRRSMVATRKQLNLDSGDEQGSSEEKVGQ 177
+ N S SK +K ++A+ PRREGLRPRRS K+L +SG +Q +SEEK GQ
Sbjct: 121 VHKNFST-----SKSRKDMDAELAPRREGLRPRRSTTIANKRLKTESGADQDTSEEKDGQ 175
Query: 178 DETENGNESDNDADDGQNEIXXXXXXXXXXXXXXXXXXXXXXXXXXXX---QEGRRRYDL 234
DETENGNE D DADDG+NE+ QEGR+RYDL
Sbjct: 176 DETENGNELD-DADDGENEVEAEDEGNGEDEGDGEDEGEEDGDDDEEGDEEQEGRKRYDL 234
Query: 235 RNRAEVRRLSVEE--GKQRPRSPRRVLHQGIGTKVGRDVRKGGSRVLKRHRLARAXXXXX 292
RNRAEVRR+ E +Q+PRSPRRVLHQG+GT+VGRD R+GGSR KRHR R
Sbjct: 235 RNRAEVRRMPTGEINKQQQPRSPRRVLHQGMGTRVGRDGRRGGSRPHKRHRFTRTDDSDD 294
Query: 293 XXXXXXXXQGPAIXXXXXXXXXXXXXLFGGLEMHGTTAWGLNVAASGWGHQGDTLAALTS 352
QGPAI LFGGL+ +G+++ GLNV ASGWGHQ D LAALTS
Sbjct: 295 SLLVDELDQGPAIPWARGGNRSGAPWLFGGLDTYGSSSLGLNVGASGWGHQSDGLAALTS 354
Query: 353 GIQTAGPSSKGGADIQPLQVDESVSFDDIGGLSEYIDALKEMVFFPLLYPDFFASYHITP 412
G+QTAGPSSKGGADIQPLQ++E ++FDDIGGLSEYI+ LKEMVFFPLLYP+FFASY ITP
Sbjct: 355 GVQTAGPSSKGGADIQPLQINEDINFDDIGGLSEYINDLKEMVFFPLLYPEFFASYSITP 414
Query: 413 PRGVLLCGPPGTGKTLIARALACAASKAGQKVSFYMRKGADVLSKWVGEAERQLKLLFEE 472
PRGVLLCGPPGTGKTLIARALACAASKAGQKVSFYMRKGADVLSKWVGEAERQLKLLFEE
Sbjct: 415 PRGVLLCGPPGTGKTLIARALACAASKAGQKVSFYMRKGADVLSKWVGEAERQLKLLFEE 474
Query: 473 AQRNQPSIIFFDEIDGLAPVRSSKQEQIHNSIVSTLLALMDGLDSRGQVVLIGATNRVDA 532
AQRNQPSIIFFDEIDGLAPVRSSKQEQIHNSIVSTLLALMDGLDSRGQVVLIGATNRVDA
Sbjct: 475 AQRNQPSIIFFDEIDGLAPVRSSKQEQIHNSIVSTLLALMDGLDSRGQVVLIGATNRVDA 534
Query: 533 IDGALRRPGRFDREFNFPLPGCEARAEILDIHTRKWKQPPSRELKSELAASCVGYCGADL 592
IDGALRRPGRFDREFNF LPGCEARAEILDIHTRKWK PP+RELK ELAA+CVGYCGADL
Sbjct: 535 IDGALRRPGRFDREFNFSLPGCEARAEILDIHTRKWKHPPTRELKEELAATCVGYCGADL 594
Query: 593 KALCTEAAIRAFREKYPQVYTSDDKFLIDVDSVTVEKYHFIEAMSTITPAAHRGATVHSR 652
KALCTEAAIRAFREKYPQVYTSDDK+ IDV V VEK HF+EAMS ITPAAHRG+ V SR
Sbjct: 595 KALCTEAAIRAFREKYPQVYTSDDKYAIDVGLVNVEKSHFVEAMSAITPAAHRGSVVQSR 654
Query: 653 PLSLVVAPCLQRHLQKAMNYISDIFPPLGMSSELTKLCMLSHGSAIPLVYRPRLLLCGSE 712
PLS VV PCL RHL ++M+ ISDIFP SSELTKL +L+ GSAIPLVYRPRLLL G E
Sbjct: 655 PLSPVVLPCLHRHLLESMSLISDIFPSSATSSELTKLSILTFGSAIPLVYRPRLLLLGGE 714
Query: 713 GTGVDHLGPAILHELEKFPVHSLGLPALLSDPSAKTPEEALVHIFGEARRTTPSILYIPQ 772
G G+DHLGPAILHELEKFP+HSLGLP+LLSDP AKTPEEALVHIF EARRTTPSILYIP
Sbjct: 715 GVGLDHLGPAILHELEKFPIHSLGLPSLLSDPGAKTPEEALVHIFSEARRTTPSILYIPM 774
Query: 773 FNLWWENAHXXXXXXXXXXXXXXXXXXPILLLGSSSVPLAEVEGDPSTVFPLRSVYQVEK 832
FN WWENAH PILLL +S L+++E +VF RSVY V+K
Sbjct: 775 FNNWWENAHEQLRAVFLTLLEELPSNLPILLLATSYGELSDME--EQSVFDNRSVYTVDK 832
Query: 833 PSTEDRSLFLGRLIEAAVSVVLEGRSKKPQESVSLPELPKVPTVESGPKASELKAKVEAE 892
PS+EDRSLF RLIEAA+SV+ G + KP LPELPKVP +GPK +E+KAKVEAE
Sbjct: 833 PSSEDRSLFFDRLIEAALSVI-SGLNGKPDGPQPLPELPKVPKEPTGPKPAEVKAKVEAE 891
Query: 893 QHALRRLRMCLRDVCNRMLYDKRFSAFHYPVTDEDAPNYRSIIQNPMDLATLLQRVDSGH 952
QHALRRLRMCLRDVCNR+LYDKRFSAFH+PVTDEDAPNYRSIIQ PMD ATLLQRVD+G
Sbjct: 892 QHALRRLRMCLRDVCNRILYDKRFSAFHFPVTDEDAPNYRSIIQIPMDTATLLQRVDTGQ 951
Query: 953 YVTCSAFLQDVDLIVTNAK 971
Y+TC+ FLQDVDLIV NAK
Sbjct: 952 YLTCTPFLQDVDLIVRNAK 970
>UNIPROTKB|E2RRW1 [details] [associations]
symbol:ATAD2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR001487 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 Pfam:PF00439 PRINTS:PR00503
PROSITE:PS00674 PROSITE:PS50014 SMART:SM00297 SMART:SM00382
GO:GO:0005524 GO:GO:0017111 Gene3D:1.20.920.10 SUPFAM:SSF47370
CTD:29028 OMA:PSVYENG GeneTree:ENSGT00550000074694
EMBL:AAEX03008783 RefSeq:XP_850520.1 ProteinModelPortal:E2RRW1
Ensembl:ENSCAFT00000001534 GeneID:475090 KEGG:cfa:475090
Uniprot:E2RRW1
Length = 1373
Score = 996 (355.7 bits), Expect = 1.6e-154, Sum P(4) = 1.6e-154
Identities = 190/314 (60%), Positives = 238/314 (75%)
Query: 365 ADIQPLQVDESVSFDDIGGLSEYIDALKEMVFFPLLYPDFFASYHITPPRGVLLCGPPGT 424
AD+ P+Q+D SV FD +GGLS +I ALKEMV FPLLYP+ F + I PPRG L GPPGT
Sbjct: 392 ADVDPMQLDSSVRFDSVGGLSNHIAALKEMVVFPLLYPEVFEKFKIQPPRGCLFYGPPGT 451
Query: 425 GKTLIARALACAASKAGQKVSFYMRKGADVLSKWVGEAERQLKLLFEEAQRNQPSIIFFD 484
GKTL+ARALA S+ ++V+F+MRKGAD LSKWVGE+ERQL+LLF++A + +PSIIFFD
Sbjct: 452 GKTLVARALANECSQGDKRVAFFMRKGADCLSKWVGESERQLRLLFDQAYQMRPSIIFFD 511
Query: 485 EIDGLAPVRSSKQEQIHNSIVSTLLALMDGLDSRGQVVLIGATNRVDAIDGALRRPGRFD 544
EIDGLAPVRSS+Q+QIH+SIVSTLLALMDGLDSRG++V+IGATNR+D+ID ALRRPGRFD
Sbjct: 512 EIDGLAPVRSSRQDQIHSSIVSTLLALMDGLDSRGEIVVIGATNRLDSIDPALRRPGRFD 571
Query: 545 REFNFPLPGCEARAEILDIHTRKWKQPPSRELKSELAASCVGYCGADLKALCTEAAIRAF 604
REF F LP +AR EIL IHTR W P ELA +CVGYCGAD+K++C+EAA+ A
Sbjct: 572 REFLFSLPDKDARKEILKIHTRDWNPKPLDIFLEELAENCVGYCGADIKSICSEAALCAL 631
Query: 605 REKYPQVYTSDDKFLIDVDSVTVEKYHFIEAMSTITPAAHRGATVHSRPLSLVVAPCLQR 664
R +YPQ+YT+ +K +D+ S+ + F AM + PAA R T + LS VV P LQ
Sbjct: 632 RRRYPQIYTTSEKLQLDLSSINISAKDFEVAMQKMIPAAQRAVTSPGQALSTVVKPLLQS 691
Query: 665 HLQKAMNYISDIFP 678
+ K + + +FP
Sbjct: 692 TVHKILEALQRVFP 705
Score = 440 (159.9 bits), Expect = 1.6e-154, Sum P(4) = 1.6e-154
Identities = 101/279 (36%), Positives = 152/279 (54%)
Query: 699 PLVYRPRLLLCGSEGTGV-DHLGPAILHELEKFPVHSLGLPALLSDPSAKTPEEALVHIF 757
P+ +RPR+L+ G G G HL PA++H LEKF V++L +P L SA +PEE +
Sbjct: 768 PMSFRPRILIVGEPGFGQGSHLAPAVIHALEKFAVYTLDIPVLFG-VSATSPEETCAQMI 826
Query: 758 GEARRTTPSILYIPQFNLWWENAHXXXXXXXXXXXXXXXXXXPILLLGSSSVPLAEVEGD 817
EA+RT PSI+Y+P +LWWE P+LLL +S P + + +
Sbjct: 827 REAKRTAPSIVYVPHIHLWWEIVGPTLKATFTTLLQNIPSFAPVLLLATSDKPHSALPEE 886
Query: 818 PSTVFPLRS---VYQVEKPSTEDRSLFLGRLI--EAAVSVVLEGRSKKPQESVSLPELPK 872
+F +R ++ V+ P E+R+ F LI +AA V SKK +L LP
Sbjct: 887 VQELF-IRDYGEIFNVQLPGKEERTKFFEDLILKQAAKPPV----SKKKAVLQALEVLPV 941
Query: 873 VPTVESGPKA-SELKAKVEAEQHALRRLRMCLRDVCNRMLYDKRFSAFHYPVTDEDAPNY 931
P E P E+K E E+ R LR+ LR+V +R+ DKRF F PV ++ P+Y
Sbjct: 942 APPPEPRPLTPEEVKRLEEQEEDTFRELRIFLRNVTHRLAIDKRFRVFTKPVDPDEVPDY 1001
Query: 932 RSIIQNPMDLATLLQRVDSGHYVTCSAFLQDVDLIVTNA 970
++I+ PMDL++++ ++D Y+T +L D+DLI +NA
Sbjct: 1002 VTVIKQPMDLSSVISKIDLHKYLTVKDYLSDIDLICSNA 1040
Score = 66 (28.3 bits), Expect = 3.8e-150, Sum P(3) = 3.8e-150
Identities = 28/100 (28%), Positives = 40/100 (40%)
Query: 33 TYLYYNPIRPRKSKTKARTAASQIARMFGPGKRTVRTSNKNSVPLNLRRSTRKRRISVNL 92
T Y P+ + + K S A P + R S+ +R R+R +++
Sbjct: 282 TVYYQAPLEKPRHQRKPNIFYSGPA---SPARPRYRLSSAGPRSPYCKRMNRRRH-AIHS 337
Query: 93 EDYTDSSGSEDEDLMRPSYRPLRNRMRN-----NMSQDEL 127
D T SS SEDE + RNR N N +DEL
Sbjct: 338 SDSTSSSSSEDEQHFERRRKRSRNRAINRCLPLNFRKDEL 377
Score = 62 (26.9 bits), Expect = 1.6e-154, Sum P(4) = 1.6e-154
Identities = 19/86 (22%), Positives = 43/86 (50%)
Query: 81 RSTRKRRISVNLEDYTDSSGSEDEDLMRPSYRPLRNRMRNNMSQDELSPSKRKKVVEAKP 140
R+ R + N ++ +DSS ++ ++ R +++ + + K+++ E K
Sbjct: 69 RTRASRSLRKNAQNSSDSSFDKNMEITEKHSN--RRHFTRQLARQQ-ADKKKEECKEDKV 125
Query: 141 TPRREGLRPRRSMVATRKQLNLDSGD 166
P LR R ++V T++ L+ ++GD
Sbjct: 126 IPVTRSLRTR-NIVQTKEHLHEENGD 150
Score = 58 (25.5 bits), Expect = 2.7e-149, Sum P(3) = 2.7e-149
Identities = 17/73 (23%), Positives = 34/73 (46%)
Query: 125 DELSPSKRKKVVEAKPTPRREGLRPRRSMVATR-KQLNLDSGDEQGSSEEKVGQDETENG 183
D++ +R+++ E + V TR KQ + DE+ + ++ + +E G
Sbjct: 188 DDMKKMRRQRMRELEDLGVFNETEEENLNVYTRGKQKGIQRTDEETTDNQEGSVESSEEG 247
Query: 184 NESDNDADDGQNE 196
D + DDG++E
Sbjct: 248 E--DQEDDDGEDE 258
Score = 57 (25.1 bits), Expect = 1.6e-154, Sum P(4) = 1.6e-154
Identities = 10/27 (37%), Positives = 18/27 (66%)
Query: 170 SSEEKVGQDETENGNESDNDADDGQNE 196
SSEE Q++ + +E D+D +DG+ +
Sbjct: 243 SSEEGEDQEDDDGEDEDDDDEEDGEED 269
Score = 47 (21.6 bits), Expect = 3.8e-148, Sum P(3) = 3.8e-148
Identities = 23/120 (19%), Positives = 49/120 (40%)
Query: 77 LNLRRSTR--KRRISVNLEDYTDSSGSEDEDLMRPSYRPLRNRMRNNMSQ-DELSP--SK 131
+ +RRS R R SVN D + + + ++ R M + ++L
Sbjct: 151 IEVRRSCRIRSRYSSVNQSVLFDKLITNTAEAVLQKMDDMKKMRRQRMRELEDLGVFNET 210
Query: 132 RKKVVEAKPTPRREGLRPRRSMVATRKQLNLDSGDEQGSSEEKVGQDET---ENGNESDN 188
++ + +++G++ ++ +++S +E E+ G+DE E E DN
Sbjct: 211 EEENLNVYTRGKQKGIQRTDEETTDNQEGSVESSEEGEDQEDDDGEDEDDDDEEDGEEDN 270
>ZFIN|ZDB-GENE-030131-5754 [details] [associations]
symbol:wu:fi16e04 "wu:fi16e04" species:7955 "Danio
rerio" [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] InterPro:IPR001487
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 Pfam:PF00439 PRINTS:PR00503 PROSITE:PS00674
PROSITE:PS50014 SMART:SM00297 SMART:SM00382
ZFIN:ZDB-GENE-030131-5754 GO:GO:0005524 GO:GO:0017111
Gene3D:1.20.920.10 SUPFAM:SSF47370 PROSITE:PS00633
InterPro:IPR018359 GeneTree:ENSGT00550000074694 EMBL:CABZ01038330
IPI:IPI00901018 Ensembl:ENSDART00000111963 Uniprot:E7EXJ5
Length = 1358
Score = 994 (355.0 bits), Expect = 1.8e-154, Sum P(3) = 1.8e-154
Identities = 191/314 (60%), Positives = 236/314 (75%)
Query: 365 ADIQPLQVDESVSFDDIGGLSEYIDALKEMVFFPLLYPDFFASYHITPPRGVLLCGPPGT 424
AD+ P+Q+D++V FD IGGL ++I ALKEMV FPLLYP+ F + I PPRG L GPPGT
Sbjct: 376 ADVDPMQIDQTVRFDSIGGLGKHISALKEMVVFPLLYPEVFEKFKIQPPRGCLFYGPPGT 435
Query: 425 GKTLIARALACAASKAGQKVSFYMRKGADVLSKWVGEAERQLKLLFEEAQRNQPSIIFFD 484
GKTL+ARALA S+ +KV+F+MRKGAD LSKWVGE+ERQL+LLF++A + +PSIIFFD
Sbjct: 436 GKTLVARALANECSQGERKVAFFMRKGADCLSKWVGESERQLRLLFDQAYQMRPSIIFFD 495
Query: 485 EIDGLAPVRSSKQEQIHNSIVSTLLALMDGLDSRGQVVLIGATNRVDAIDGALRRPGRFD 544
EIDG+APVRSS+Q+QIH+SIVSTLLALMDGLDSRG+VV+IGATNR+D+ID ALRRPGRFD
Sbjct: 496 EIDGIAPVRSSRQDQIHSSIVSTLLALMDGLDSRGEVVVIGATNRLDSIDPALRRPGRFD 555
Query: 545 REFNFPLPGCEARAEILDIHTRKWKQPPSRELKSELAASCVGYCGADLKALCTEAAIRAF 604
REF F LP EAR +IL IHTR W S ELA CVGYCG D+KA+C EAA+ A
Sbjct: 556 REFLFNLPDREARKDILKIHTRHWDPQLSDAFLEELADKCVGYCGTDIKAVCAEAALCAL 615
Query: 605 REKYPQVYTSDDKFLIDVDSVTVEKYHFIEAMSTITPAAHRGATVHSRPLSLVVAPCLQR 664
R +YPQ+Y S K L+DV+S+ V F+ AM I PA+ R ++ L+ V+ P L
Sbjct: 616 RRRYPQIYASSQKLLLDVESICVSGRDFLSAMRKIVPASQRAVVSPAKALTPVIEPLLSA 675
Query: 665 HLQKAMNYISDIFP 678
L AM + +FP
Sbjct: 676 ALNNAMKMLQRLFP 689
Score = 462 (167.7 bits), Expect = 1.8e-154, Sum P(3) = 1.8e-154
Identities = 112/276 (40%), Positives = 147/276 (53%)
Query: 699 PLVYRPRLLLCGSEGTG-VDHLGPAILHELEKFPVHSLGLPALLSDPSAKTPEEALVHIF 757
P +RPRLLLCG+ G+ HL PAILH LEKF V++L + A+L S+ TPEEA +F
Sbjct: 748 PTSFRPRLLLCGTSGSAQTSHLAPAILHTLEKFTVYTLDV-AVLYGVSSATPEEACAQVF 806
Query: 758 GEARRTTPSILYIPQFNLWWENAHXXXXXXXXXXXXXXXXXXPILLLGSSSVPLAEVEGD 817
EARRT PSI+YIP WW+ P LLL + S P + +
Sbjct: 807 CEARRTAPSIVYIPHIQRWWDTVSPTLRATFISLLQDIPSFCPCLLLATCSFPHDALYTE 866
Query: 818 PSTVFPLR--SVYQVEKPSTEDRSLFLGRLI-EAAVSVVLEGRSKKPQESVSLPELPKVP 874
+F + V+ V PS ++R F LI A R Q LP P P
Sbjct: 867 VQDLFHVEYGEVFDVPLPSRDERLRFFEDLILNQAAKAPASKREAVLQALEVLPVAPPPP 926
Query: 875 TVESGPKASELKAKVEAEQHALRRLRMCLRDVCNRMLYDKRFSAFHYPVTDEDAPNYRSI 934
K EL+ E E+ LR LR+ LRDV NR+ DKRF AF PV E+ P+Y ++
Sbjct: 927 P-RLLTK-QELQKLEEQEEDTLRELRLFLRDVTNRLAQDKRFKAFTKPVDTEEVPDYTTV 984
Query: 935 IQNPMDLATLLQRVDSGHYVTCSAFLQDVDLIVTNA 970
I+ PMDL+T+L ++D Y T +A+L+DVDLI NA
Sbjct: 985 IKQPMDLSTVLSKIDLHKYETVAAYLEDVDLIWQNA 1020
Score = 87 (35.7 bits), Expect = 1.8e-154, Sum P(3) = 1.8e-154
Identities = 45/200 (22%), Positives = 87/200 (43%)
Query: 2 YSKRSGQGDGSVPGPVRTSDRLRRRPKILGRTYLYYNPIRPRKSKTK-ARTAASQIARMF 60
++ +GQ S P ++ LR+ P++ + T +R ++I R
Sbjct: 63 FADMNGQTSKSPPKEEKSGKHLRKSPRLQADGERSADEHTDEVDSTPTSRNLRARIQRR- 121
Query: 61 GPGKRTVRTSNKNSVPLNLRRSTRKRRISVNLEDYTDSSGSEDEDLMRPSYRPLRNRMRN 120
G VR S++ + + TRK+ + L D ++ +E + +R R+R+
Sbjct: 122 GEDDSAVRRSSRIT---RYKLDTRKQSV---LYDRLITNTAEAVLQKMDDMQKMRRRLRS 175
Query: 121 NMSQDE----LSPSKRKKVVEAKPTPRREGLRPRRSMVATRKQLNLDSGDEQGSSEEKVG 176
S++E S +KR ++ KP+ R + ++ Q N S ++ EE+ G
Sbjct: 176 RDSEEEKLRIYSGTKRTRIT--KPSVRGQE-------ESSDNQENEYSDQDEEEEEEEDG 226
Query: 177 QDETENGNESDNDADDGQNE 196
+ E E +E D D D+ ++E
Sbjct: 227 EGEEEENDEGDADEDEDEDE 246
Score = 60 (26.2 bits), Expect = 1.3e-151, Sum P(3) = 1.3e-151
Identities = 38/171 (22%), Positives = 73/171 (42%)
Query: 89 SVNLEDYTDSSGSEDEDLMRPSYRPLRNRM---RNNMSQDELSPSKRKKVVEAKPTPRRE 145
S NL G ED+ +R S R R ++ + ++ D L + + V++ K ++
Sbjct: 111 SRNLRARIQRRG-EDDSAVRRSSRITRYKLDTRKQSVLYDRLITNTAEAVLQ-KMDDMQK 168
Query: 146 GLRPRRSMVATRKQLNLDSGDEQGS-SEEKV-GQDETENGNESD-NDADDGQNEIXXXXX 202
R RS + ++L + SG ++ ++ V GQ+E+ + E++ +D D+ + E
Sbjct: 169 MRRRLRSRDSEEEKLRIYSGTKRTRITKPSVRGQEESSDNQENEYSDQDEEEEE-----E 223
Query: 203 XXXXXXXXXXXXXXXXXXXXXXXQEGRRRYDLRNRAEVRRLS--VEEGKQR 251
++ +RYD R R V R +EE K++
Sbjct: 224 EDGEGEEEENDEGDADEDEDEDEEDNGKRYDFRQRKAVVRYQAPLEEPKKQ 274
Score = 41 (19.5 bits), Expect = 1.3e-149, Sum P(3) = 1.3e-149
Identities = 10/26 (38%), Positives = 13/26 (50%)
Query: 163 DSGDEQGSSEEKVGQDETENGNESDN 188
DS S EEK + T++ N S N
Sbjct: 324 DSTSSSSSDEEKFERRRTKSRNRSIN 349
>UNIPROTKB|F1RR16 [details] [associations]
symbol:ATAD2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] InterPro:IPR001487 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004 Pfam:PF00439
PRINTS:PR00503 PROSITE:PS00674 PROSITE:PS50014 SMART:SM00297
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0017111
Gene3D:1.20.920.10 SUPFAM:SSF47370 CTD:29028 OMA:PSVYENG
GeneTree:ENSGT00550000074694 EMBL:CU582936 EMBL:CU469009
RefSeq:XP_001926065.4 UniGene:Ssc.23683 Ensembl:ENSSSCT00000006566
GeneID:100155780 KEGG:ssc:100155780 Uniprot:F1RR16
Length = 1388
Score = 999 (356.7 bits), Expect = 1.3e-151, Sum P(3) = 1.3e-151
Identities = 194/337 (57%), Positives = 248/337 (73%)
Query: 365 ADIQPLQVDESVSFDDIGGLSEYIDALKEMVFFPLLYPDFFASYHITPPRGVLLCGPPGT 424
AD+ P+Q+D SV FD +GGLS +I ALKEMV FPLLYP+ F + I PPRG L GPPGT
Sbjct: 408 ADVDPMQLDSSVRFDSVGGLSNHIAALKEMVVFPLLYPEVFEKFKIQPPRGCLFYGPPGT 467
Query: 425 GKTLIARALACAASKAGQKVSFYMRKGADVLSKWVGEAERQLKLLFEEAQRNQPSIIFFD 484
GKTL+ARALA S+ ++V+F+MRKGAD LSKWVGE+ERQL+LLF++A + +PSIIFFD
Sbjct: 468 GKTLVARALANECSQGDKRVAFFMRKGADCLSKWVGESERQLRLLFDQAYQMRPSIIFFD 527
Query: 485 EIDGLAPVRSSKQEQIHNSIVSTLLALMDGLDSRGQVVLIGATNRVDAIDGALRRPGRFD 544
EIDGLAPVRSS+Q+QIH+SIVSTLLALMDGLDSRG++V+IGATNR+D+ID ALRRPGRFD
Sbjct: 528 EIDGLAPVRSSRQDQIHSSIVSTLLALMDGLDSRGEIVVIGATNRLDSIDPALRRPGRFD 587
Query: 545 REFNFPLPGCEARAEILDIHTRKWKQPPSRELKSELAASCVGYCGADLKALCTEAAIRAF 604
REF F LP +AR EIL IHTR W P ELA +CVGYCGAD+K++C+EAA+ A
Sbjct: 588 REFLFSLPDKDARKEILKIHTRDWNPKPLDMFLEELAENCVGYCGADIKSICSEAALCAL 647
Query: 605 REKYPQVYTSDDKFLIDVDSVTVEKYHFIEAMSTITPAAHRGATVHSRPLSLVVAPCLQR 664
R +YPQ+YT+ +K +D+ S+T+ F AM + PA+ R T + LS +V P LQ
Sbjct: 648 RRRYPQIYTTSEKLQLDLSSITISAKDFEVAMQKMIPASQRAVTSPGQALSTIVKPLLQS 707
Query: 665 HLQKAMNYISDIFPPLGMSSELTKLCMLSHGSAIPLV 701
+ K + + +FP +E+ K L + PL+
Sbjct: 708 TVHKILEALQRVFP----HAEIRKNKALDSDISCPLL 740
Score = 447 (162.4 bits), Expect = 1.3e-151, Sum P(3) = 1.3e-151
Identities = 102/279 (36%), Positives = 154/279 (55%)
Query: 699 PLVYRPRLLLCGSEGTGV-DHLGPAILHELEKFPVHSLGLPALLSDPSAKTPEEALVHIF 757
P+ +RPR+L+ G G G HL PA++H LEKF V++L +P L SA +PEE +
Sbjct: 784 PMSFRPRMLIVGEPGFGQGSHLAPAVIHALEKFAVYTLDIPVLFG-VSATSPEETCAQMI 842
Query: 758 GEARRTTPSILYIPQFNLWWENAHXXXXXXXXXXXXXXXXXXPILLLGSSSVPLAEVEGD 817
EA+RT PSI+Y+P +LWWE P+LLL +S P + + +
Sbjct: 843 REAKRTAPSIVYVPHIHLWWEIVGPTLKATFTTLLQNIPSFAPVLLLATSDKPHSSLPEE 902
Query: 818 PSTVFPLRS---VYQVEKPSTEDRSLFLGRLI--EAAVSVVLEGRSKKPQESVSLPELPK 872
+F +R ++ V+ P+ E+R+ F LI +AA + SKK +L LP
Sbjct: 903 VQELF-IRDYGEIFNVQLPNKEERTQFFEDLILKQAAKPPI----SKKKAVLQALEVLPV 957
Query: 873 VPTVESGP-KASELKAKVEAEQHALRRLRMCLRDVCNRMLYDKRFSAFHYPVTDEDAPNY 931
P E P A E+K E E+ R LR+ LR+V +R+ DKRF F PV ++ P+Y
Sbjct: 958 APPPEPRPLTAEEVKRLEEQEEDTFRELRIFLRNVTHRLASDKRFRIFTKPVDPDEVPDY 1017
Query: 932 RSIIQNPMDLATLLQRVDSGHYVTCSAFLQDVDLIVTNA 970
S+I+ PMDL++++ ++D Y+T +L D+DLI +NA
Sbjct: 1018 VSVIKQPMDLSSVISKIDLHKYLTVKDYLSDIDLICSNA 1056
Score = 70 (29.7 bits), Expect = 1.3e-151, Sum P(3) = 1.3e-151
Identities = 33/157 (21%), Positives = 65/157 (41%)
Query: 55 QIARMFGPGKRTVRTSNKNSVPLNLRRSTRKRRISVNLEDYTDSSGSED---EDLMRPSY 111
Q+AR K+ +P+ RS R R I N E + +G + +R Y
Sbjct: 107 QLARQQADKKKKEECKEDKVIPVT--RSLRTRNIVQNAEHLHEENGDVEVRRSCRIRSRY 164
Query: 112 RPLR-----NRMRNNMSQ------DELSPSKRKKVVEAKPTPR-REGLRPRRSMVATRKQ 159
+ +++ N ++ D++ +R+++ E + E +M KQ
Sbjct: 165 GSVNQSVLFDKLITNTAEAVLQKMDDMKKMRRQRMRELEDLAVFNETEEGNLNMYTRGKQ 224
Query: 160 LNLDSGDEQGSSEEKVGQDETENGNESDNDADDGQNE 196
++ DE+ + ++ + +E G E D DDG++E
Sbjct: 225 KSIQRTDEETTDNQEGSVESSEEG-EDQEDEDDGEDE 260
Score = 67 (28.6 bits), Expect = 2.6e-151, Sum P(3) = 2.6e-151
Identities = 28/100 (28%), Positives = 40/100 (40%)
Query: 33 TYLYYNPIRPRKSKTKARTAASQIARMFGPGKRTVRTSNKNSVPLNLRRSTRKRRISVNL 92
T Y P+ + + K S A P + R S+ +R R+R +++
Sbjct: 298 TVYYQAPLEKPRHQRKRNIFYSGPA---SPARPRYRLSSAGPRSPYCKRMNRRRH-AIHS 353
Query: 93 EDYTDSSGSEDEDLMRPSYRPLRNRMRN-----NMSQDEL 127
D T SS SEDE + RNR N N +DEL
Sbjct: 354 SDSTSSSSSEDEQHFERRRKTSRNRAINRCLPLNFRKDEL 393
Score = 55 (24.4 bits), Expect = 4.9e-150, Sum P(3) = 4.9e-150
Identities = 9/27 (33%), Positives = 19/27 (70%)
Query: 170 SSEEKVGQDETENGNESDNDADDGQNE 196
SSEE Q++ ++G + D++ DD +++
Sbjct: 244 SSEEGEDQEDEDDGEDEDDEEDDEEDD 270
Score = 53 (23.7 bits), Expect = 7.9e-150, Sum P(3) = 7.9e-150
Identities = 11/36 (30%), Positives = 19/36 (52%)
Query: 163 DSGDEQGSSEEKVGQDETENGNESD--NDADDGQNE 196
D DE +E +D+ E+ E D +D +DG+ +
Sbjct: 250 DQEDEDDGEDEDDEEDDEEDDEEDDEEDDEEDGEED 285
Score = 45 (20.9 bits), Expect = 5.5e-149, Sum P(3) = 5.5e-149
Identities = 10/26 (38%), Positives = 15/26 (57%)
Query: 163 DSGDEQGSSEEKVGQDETENGNESDN 188
D D++ EE +D+ E+G E DN
Sbjct: 262 DEEDDEEDDEEDDEEDDEEDGEE-DN 286
Score = 38 (18.4 bits), Expect = 1.5e-108, Sum P(3) = 1.5e-108
Identities = 7/19 (36%), Positives = 14/19 (73%)
Query: 671 NYISDIFPPLGMSSELTKL 689
+Y+S I P+ +SS ++K+
Sbjct: 1016 DYVSVIKQPMDLSSVISKI 1034
>UNIPROTKB|E1BC78 [details] [associations]
symbol:ATAD2 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005634 "nucleus" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] InterPro:IPR001487 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004 Pfam:PF00439
PRINTS:PR00503 PROSITE:PS00674 PROSITE:PS50014 SMART:SM00297
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0017111
Gene3D:1.20.920.10 SUPFAM:SSF47370 OMA:PSVYENG
GeneTree:ENSGT00550000074694 EMBL:DAAA02038173 EMBL:DAAA02038174
IPI:IPI00923885 Ensembl:ENSBTAT00000061524 Uniprot:E1BC78
Length = 1372
Score = 982 (350.7 bits), Expect = 2.9e-151, Sum P(4) = 2.9e-151
Identities = 187/314 (59%), Positives = 237/314 (75%)
Query: 365 ADIQPLQVDESVSFDDIGGLSEYIDALKEMVFFPLLYPDFFASYHITPPRGVLLCGPPGT 424
AD+ P+Q+D SV FD +GGLS +I ALKEMV FPLLYP+ F + I PPRG L GPPGT
Sbjct: 398 ADVDPMQLDSSVRFDSVGGLSNHIAALKEMVVFPLLYPEVFEKFKIQPPRGCLFYGPPGT 457
Query: 425 GKTLIARALACAASKAGQKVSFYMRKGADVLSKWVGEAERQLKLLFEEAQRNQPSIIFFD 484
GKTL+ARALA S+ ++V+F+MRKGAD LSKWVGE+ERQL+LLF++A + +PSIIFFD
Sbjct: 458 GKTLVARALANECSQGDKRVAFFMRKGADCLSKWVGESERQLRLLFDQAYQMRPSIIFFD 517
Query: 485 EIDGLAPVRSSKQEQIHNSIVSTLLALMDGLDSRGQVVLIGATNRVDAIDGALRRPGRFD 544
EIDGLAPVRSS+Q+QIH+SIVSTLLALMDGLDSRG++V+IGATNR+D+ID ALRRPGRFD
Sbjct: 518 EIDGLAPVRSSRQDQIHSSIVSTLLALMDGLDSRGEIVVIGATNRLDSIDPALRRPGRFD 577
Query: 545 REFNFPLPGCEARAEILDIHTRKWKQPPSRELKSELAASCVGYCGADLKALCTEAAIRAF 604
REF F LP +AR EIL IHTR W P ELA + VGYCGAD+K++C+EAA+ A
Sbjct: 578 REFLFSLPDKDARKEILKIHTRDWNPKPLDMFLEELAENSVGYCGADIKSVCSEAALCAL 637
Query: 605 REKYPQVYTSDDKFLIDVDSVTVEKYHFIEAMSTITPAAHRGATVHSRPLSLVVAPCLQR 664
R +YPQ+YT+ +K +D+ S+ + F AM + PA+ R T + LS +V P LQ
Sbjct: 638 RRRYPQIYTTSEKLQLDLSSINISAKDFEVAMQKMIPASQRAVTSPGQALSTIVKPLLQS 697
Query: 665 HLQKAMNYISDIFP 678
+ K + + +FP
Sbjct: 698 TVHKILEALQRVFP 711
Score = 452 (164.2 bits), Expect = 2.9e-151, Sum P(4) = 2.9e-151
Identities = 102/278 (36%), Positives = 152/278 (54%)
Query: 699 PLVYRPRLLLCGSEGTGV-DHLGPAILHELEKFPVHSLGLPALLSDPSAKTPEEALVHIF 757
P+ +RPR+L+ G G G HL PA++H LEKF V++L +P L SA +PEE +
Sbjct: 774 PMSFRPRMLIVGEPGFGQGSHLAPAVIHALEKFTVYTLDIPVLFG-VSATSPEETCAQVI 832
Query: 758 GEARRTTPSILYIPQFNLWWENAHXXXXXXXXXXXXXXXXXXPILLLGSSSVPLAEVEGD 817
EA+RT PSI+Y+P +LWWE P+LLL +S P + + +
Sbjct: 833 REAKRTAPSIVYVPHIHLWWEIVGPTLKATFTTLLQNIPSFAPVLLLATSDKPHSTLPEE 892
Query: 818 PSTVF--PLRSVYQVEKPSTEDRSLFLGRLI--EAAVSVVLEGRSKKPQESVSLPELPKV 873
+F ++ V+ PS E+R+ F LI +AA + SKK +L LP
Sbjct: 893 VQELFIHDYGEIFNVQLPSKEERTQFFEDLILKQAAKPPI----SKKKAVLQALEVLPVA 948
Query: 874 PTVESGP-KASELKAKVEAEQHALRRLRMCLRDVCNRMLYDKRFSAFHYPVTDEDAPNYR 932
P E P A ELK E E+ R LR+ LR+V +R+ DKRF F PV ++ P+Y
Sbjct: 949 PPPEPRPLTAEELKRLEEQEEDTFRELRIFLRNVTHRLAIDKRFRIFTKPVDPDEVPDYV 1008
Query: 933 SIIQNPMDLATLLQRVDSGHYVTCSAFLQDVDLIVTNA 970
++I+ PMDL++++ ++D Y+T +L D+DLI +NA
Sbjct: 1009 TVIKQPMDLSSVISKIDLHKYLTVKDYLSDIDLICSNA 1046
Score = 66 (28.3 bits), Expect = 1.1e-149, Sum P(3) = 1.1e-149
Identities = 27/100 (27%), Positives = 41/100 (41%)
Query: 33 TYLYYNPIRPRKSKTKARTAASQIARMFGPGKRTVRTSNKNSVPLNLRRSTRKRRISVNL 92
T Y P+ + + K + + A P + R S+ +R R+R +++
Sbjct: 288 TVYYQAPLEKPRHQRKPKIFYTGPA---SPARPRYRLSSAGPRSPYCKRMNRRRH-AIHS 343
Query: 93 EDYTDSSGSEDEDLMRPSYRPLRNRMRN-----NMSQDEL 127
D T SS SEDE + RNR N N +DEL
Sbjct: 344 SDSTSSSSSEDEQQFERRRKRSRNRAINRCLPLNFRKDEL 383
Score = 56 (24.8 bits), Expect = 2.9e-151, Sum P(4) = 2.9e-151
Identities = 12/46 (26%), Positives = 24/46 (52%)
Query: 152 SMVATRKQLNLDSGDEQGSSEEKVGQDETENG-NESDNDADDGQNE 196
+M KQ ++ DE+ + ++ + +E G ++ D D DD + E
Sbjct: 216 NMYTRGKQKDIQRTDEETTDNQEGSVESSEEGEDQEDEDEDDEEEE 261
Score = 53 (23.7 bits), Expect = 5.9e-151, Sum P(4) = 5.9e-151
Identities = 10/27 (37%), Positives = 17/27 (62%)
Query: 170 SSEEKVGQDETENGNESDNDADDGQNE 196
SSEE Q++ + +E + D DD ++E
Sbjct: 243 SSEEGEDQEDEDEDDEEEEDDDDDEDE 269
Score = 47 (21.6 bits), Expect = 2.5e-150, Sum P(4) = 2.5e-150
Identities = 16/69 (23%), Positives = 26/69 (37%)
Query: 120 NNMSQDELSPSKRKKVVEAKPTPRREGLRPRRSMVATRKQLNLDSGDEQGSSEEKVGQDE 179
N + L+ R K + + T S+ ++ + + + DE EE DE
Sbjct: 208 NETEEGNLNMYTRGKQKDIQRTDEETTDNQEGSVESSEEGEDQEDEDEDDEEEEDDDDDE 267
Query: 180 TENGNESDN 188
E E DN
Sbjct: 268 DEEDVEEDN 276
Score = 45 (20.9 bits), Expect = 4.1e-150, Sum P(4) = 4.1e-150
Identities = 9/29 (31%), Positives = 17/29 (58%)
Query: 167 EQGSSEEKVGQDETENGNESDNDADDGQN 195
E+G +E +DE + E D+D +D ++
Sbjct: 245 EEGEDQED--EDEDDEEEEDDDDDEDEED 271
Score = 40 (19.1 bits), Expect = 1.4e-149, Sum P(4) = 1.4e-149
Identities = 8/27 (29%), Positives = 13/27 (48%)
Query: 163 DSGDEQGSSEEKVGQDETENGNESDND 189
D DE EE+ D+ E+ + + D
Sbjct: 249 DQEDEDEDDEEEEDDDDDEDEEDVEED 275
Score = 37 (18.1 bits), Expect = 2.9e-151, Sum P(4) = 2.9e-151
Identities = 13/50 (26%), Positives = 23/50 (46%)
Query: 229 RRRYDLRNRAEVRRLSVEEGKQ----RPRSPRRVLHQGIGTKVGRDVRKG 274
RRR+ + + S E+ +Q R RS R +++ + +D KG
Sbjct: 336 RRRHAIHSSDSTSSSSSEDEQQFERRRKRSRNRAINRCLPLNFRKDELKG 385
>UNIPROTKB|F1MEU3 [details] [associations]
symbol:ATAD2B "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005524 "ATP binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR001487 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 Pfam:PF00439 PRINTS:PR00503
PROSITE:PS00674 PROSITE:PS50014 SMART:SM00297 SMART:SM00382
GO:GO:0005524 GO:GO:0017111 Gene3D:1.20.920.10 SUPFAM:SSF47370
PROSITE:PS00633 InterPro:IPR018359 GeneTree:ENSGT00550000074694
EMBL:DAAA02031678 EMBL:DAAA02031679 EMBL:DAAA02031680
EMBL:DAAA02031681 IPI:IPI00687055 Ensembl:ENSBTAT00000012179
Uniprot:F1MEU3
Length = 1248
Score = 985 (351.8 bits), Expect = 1.1e-150, Sum P(3) = 1.1e-150
Identities = 189/314 (60%), Positives = 230/314 (73%)
Query: 365 ADIQPLQVDESVSFDDIGGLSEYIDALKEMVFFPLLYPDFFASYHITPPRGVLLCGPPGT 424
AD+ P+ +D+SV FD IGGLS +I ALKEMV FPLLYP+ F + I PPRG L GPPGT
Sbjct: 276 ADVDPMNIDKSVRFDSIGGLSHHIHALKEMVVFPLLYPEIFEKFKIQPPRGCLFYGPPGT 335
Query: 425 GKTLIARALACAASKAGQKVSFYMRKGADVLSKWVGEAERQLKLLFEEAQRNQPSIIFFD 484
GKTL+ARALA S+ +KV+F+MRKGAD LSKWVGE+ERQL+LLF++A +PSIIFFD
Sbjct: 336 GKTLVARALANECSQGDKKVAFFMRKGADCLSKWVGESERQLRLLFDQAYLMRPSIIFFD 395
Query: 485 EIDGLAPVRSSKQEQIHNSIVSTLLALMDGLDSRGQVVLIGATNRVDAIDGALRRPGRFD 544
EIDGLAPVRSS+Q+QIH+SIVSTLLALMDGLD+RG++V+IGATNR+D+ID ALRRPGRFD
Sbjct: 396 EIDGLAPVRSSRQDQIHSSIVSTLLALMDGLDNRGEIVVIGATNRLDSIDPALRRPGRFD 455
Query: 545 REFNFPLPGCEARAEILDIHTRKWKQPPSRELKSELAASCVGYCGADLKALCTEAAIRAF 604
REF F LP +AR IL IHTR W S ELA CVGYCGAD+KALCTEAA+ A
Sbjct: 456 REFLFNLPDQKARKHILQIHTRDWNPKLSDAFLGELAEKCVGYCGADIKALCTEAALIAL 515
Query: 605 REKYPQVYTSDDKFLIDVDSVTVEKYHFIEAMSTITPAAHRGATVHSRPLSLVVAPCLQR 664
R +YPQ+Y S K +DV S+ + F AM I PA+ R LS ++ P L+R
Sbjct: 516 RRRYPQIYASSHKLQLDVSSIVLNAQDFYHAMQNIVPASQRAVMSSGHALSPIIKPLLER 575
Query: 665 HLQKAMNYISDIFP 678
+ + +FP
Sbjct: 576 SFNNILAVLQKVFP 589
Score = 476 (172.6 bits), Expect = 1.1e-150, Sum P(3) = 1.1e-150
Identities = 112/277 (40%), Positives = 153/277 (55%)
Query: 699 PLVYRPRLLLCGSEGTG-VDHLGPAILHELEKFPVHSLGLPALLSDPSAKTPEEALVHIF 757
P YRPRLLL G G+G HL PA+LH LEKF VH L LPAL S SAKTPEE+ IF
Sbjct: 653 PTSYRPRLLLSGERGSGQTSHLAPALLHTLEKFSVHRLDLPALYS-VSAKTPEESCAQIF 711
Query: 758 GEARRTTPSILYIPQFNLWWENAHXXXXXXXXXXXXXXXXXXPILLLGSSSVPLAEVEGD 817
EARRT PSI+Y+P WWE PI LL +S +E+ +
Sbjct: 712 REARRTVPSIVYMPHIGDWWEAVSETVRATFLTLLQDIPSFSPIFLLSTSETMYSELPEE 771
Query: 818 PSTVFPLR--SVYQVEKPSTEDRSLFLGRLIEAAVSVVLEGRSKKPQESVSLPELP-KVP 874
+F ++ V +++P EDR F LI S+ R K ++ LP +P
Sbjct: 772 VKCIFRIQYEEVLYIQRPIEEDRRKFFQELILNQASMAPPRR--KHTGLCAMEVLPLALP 829
Query: 875 TVESGPKASELKAKVE-AEQHALRRLRMCLRDVCNRMLYDKRFSAFHYPVTDEDAPNYRS 933
+ SE K ++E E++ LR LR+ LRDV R+ DKRF+ F PV E+ +Y
Sbjct: 830 SPPRQLSESE-KIRMEDQEENTLRELRLFLRDVTKRLATDKRFNIFSKPVDIEEVSDYLE 888
Query: 934 IIQNPMDLATLLQRVDSGHYVTCSAFLQDVDLIVTNA 970
+I+ PMDL+T++ ++D +Y+T FL+D+DLI +NA
Sbjct: 889 VIKEPMDLSTVITKIDKHNYLTAKDFLKDIDLICSNA 925
Score = 46 (21.3 bits), Expect = 1.1e-150, Sum P(3) = 1.1e-150
Identities = 26/115 (22%), Positives = 48/115 (41%)
Query: 77 LNLRRSTRKRRISVNLEDYTDSSGSEDEDLMRPSYRPLRNRMRNNMSQDELSPSKRKKVV 136
+N+RR+ R + L +TD+ E+ D+ Y ++ R R ++ ++ +V
Sbjct: 54 INIRRNRRSGEVE-RLRMWTDTE-FENMDM----YSRVKRR-RKSLRRNSYGIQNHHEV- 105
Query: 137 EAKPTPRREGLRPRRSMVATRKQLNLDSGDEQGS--SEEKVGQDETENGNESDND 189
EG R + + + D G+ G S+E+ G E E +ND
Sbjct: 106 --STEGEEEGGRKEKHIQTIYIYMTQD-GEVCGKLESQEEDGDIEVEEAEGEEND 157
Score = 40 (19.1 bits), Expect = 1.5e-40, Sum P(3) = 1.5e-40
Identities = 11/63 (17%), Positives = 26/63 (41%)
Query: 601 IRAFREKYPQVYTSD-DKFLIDVDSVTVEKYHFIEAMSTITPAAHRGATVHSRPLSLVVA 659
+ ++ +P S D + D++++ ++ A+S + H G+ + V
Sbjct: 581 LAVLQKVFPHAEISQSDNIITDIETLILDDSEDENALSIFETSCHSGSPKKQSSAAAVHK 640
Query: 660 PCL 662
P L
Sbjct: 641 PYL 643
Score = 38 (18.4 bits), Expect = 1.5e-104, Sum P(3) = 1.5e-104
Identities = 6/24 (25%), Positives = 16/24 (66%)
Query: 666 LQKAMNYISDIFPPLGMSSELTKL 689
+++ +Y+ I P+ +S+ +TK+
Sbjct: 880 IEEVSDYLEVIKEPMDLSTVITKI 903
Score = 37 (18.1 bits), Expect = 1.0e-149, Sum P(3) = 1.0e-149
Identities = 8/25 (32%), Positives = 13/25 (52%)
Query: 229 RRRYDLRNRAEVRRLSVEEGKQRPR 253
R Y ++N EV EEG ++ +
Sbjct: 94 RNSYGIQNHHEVSTEGEEEGGRKEK 118
>UNIPROTKB|J9NU31 [details] [associations]
symbol:ATAD2B "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR001487 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 Pfam:PF00439 PRINTS:PR00503
PROSITE:PS00674 PROSITE:PS50014 SMART:SM00297 SMART:SM00382
GO:GO:0005524 GO:GO:0017111 Gene3D:1.20.920.10 SUPFAM:SSF47370
PROSITE:PS00633 InterPro:IPR018359 GeneTree:ENSGT00550000074694
EMBL:AAEX03010776 EMBL:AAEX03010777 EMBL:AAEX03010778
Ensembl:ENSCAFT00000043993 Uniprot:J9NU31
Length = 1291
Score = 985 (351.8 bits), Expect = 4.9e-150, Sum P(3) = 4.9e-150
Identities = 189/314 (60%), Positives = 230/314 (73%)
Query: 365 ADIQPLQVDESVSFDDIGGLSEYIDALKEMVFFPLLYPDFFASYHITPPRGVLLCGPPGT 424
AD+ P+ +D+SV FD IGGLS +I ALKEMV FPLLYP+ F + I PPRG L GPPGT
Sbjct: 224 ADVDPMNIDKSVRFDSIGGLSHHIHALKEMVVFPLLYPEIFEKFKIQPPRGCLFYGPPGT 283
Query: 425 GKTLIARALACAASKAGQKVSFYMRKGADVLSKWVGEAERQLKLLFEEAQRNQPSIIFFD 484
GKTL+ARALA S+ +KV+F+MRKGAD LSKWVGE+ERQL+LLF++A +PSIIFFD
Sbjct: 284 GKTLVARALANECSQGDKKVAFFMRKGADCLSKWVGESERQLRLLFDQAYLMRPSIIFFD 343
Query: 485 EIDGLAPVRSSKQEQIHNSIVSTLLALMDGLDSRGQVVLIGATNRVDAIDGALRRPGRFD 544
EIDGLAPVRSS+Q+QIH+SIVSTLLALMDGLD+RG++V+IGATNR+D+ID ALRRPGRFD
Sbjct: 344 EIDGLAPVRSSRQDQIHSSIVSTLLALMDGLDNRGEIVVIGATNRLDSIDPALRRPGRFD 403
Query: 545 REFNFPLPGCEARAEILDIHTRKWKQPPSRELKSELAASCVGYCGADLKALCTEAAIRAF 604
REF F LP +AR IL IHTR W S ELA CVGYCGAD+KALCTEAA+ A
Sbjct: 404 REFLFNLPDQKARKHILQIHTRDWNPKLSDAFLGELAEKCVGYCGADIKALCTEAALIAL 463
Query: 605 REKYPQVYTSDDKFLIDVDSVTVEKYHFIEAMSTITPAAHRGATVHSRPLSLVVAPCLQR 664
R +YPQ+Y S K +DV S+ + F AM I PA+ R LS ++ P L+R
Sbjct: 464 RRRYPQIYASSHKLQLDVSSIVLNAQDFYHAMQNIVPASQRAVMSSGHALSPIIKPLLER 523
Query: 665 HLQKAMNYISDIFP 678
+ + +FP
Sbjct: 524 SFNNILAVLQKVFP 537
Score = 465 (168.7 bits), Expect = 4.9e-150, Sum P(3) = 4.9e-150
Identities = 110/276 (39%), Positives = 149/276 (53%)
Query: 699 PLVYRPRLLLCGSEGTG-VDHLGPAILHELEKFPVHSLGLPALLSDPSAKTPEEALVHIF 757
P YRPRLLL G G+G HL PA+LH LEKF VH L LPAL S SAKTPEE+ IF
Sbjct: 600 PTSYRPRLLLSGERGSGQTSHLAPALLHTLEKFSVHRLDLPALYS-VSAKTPEESCAQIF 658
Query: 758 GEARRTTPSILYIPQFNLWWENAHXXXXXXXXXXXXXXXXXXPILLLGSSSVPLAEVEGD 817
EARRT PSI+Y+P WWE PI LL +S +E+ +
Sbjct: 659 REARRTVPSIVYMPHIGDWWEAVSETVRATFLTLLQDIPSFSPIFLLSTSETMYSELPEE 718
Query: 818 PSTVFPLR--SVYQVEKPSTEDRSLFLGRLIEAAVSVVLEGRSKKPQESVSLPELP-KVP 874
+F ++ V +++P EDR F LI S+ R K ++ LP +P
Sbjct: 719 VKCIFRIQYEEVLYIQRPIEEDRRKFFQELILNQASMAPPRR--KHTGLCAMEVLPLALP 776
Query: 875 TVESGPKASELKAKVEAEQHALRRLRMCLRDVCNRMLYDKRFSAFHYPVTDEDAPNYRSI 934
+ SE + E++ LR LR+ LRDV R+ DKRF+ F PV+D Y +
Sbjct: 777 SPPRQLSESEKNRMEDQEENTLRELRLFLRDVTKRLATDKRFNIFSKPVSD-----YLEV 831
Query: 935 IQNPMDLATLLQRVDSGHYVTCSAFLQDVDLIVTNA 970
I+ PMDL+T++ ++D +Y+T FL+D+DLI +NA
Sbjct: 832 IKEPMDLSTVITKIDKHNYLTAKDFLKDIDLICSNA 867
Score = 51 (23.0 bits), Expect = 4.9e-150, Sum P(3) = 4.9e-150
Identities = 14/47 (29%), Positives = 23/47 (48%)
Query: 143 RREGLRPRRSMVATRKQLNLDSGDEQGSSEEKVGQDETENGNESDND 189
RR+ LR + +++ + G+E+ S EE G E E +ND
Sbjct: 75 RRKSLRRNSYGIQNHHEVSTE-GEEEESQEED-GDIEVEEAEGEEND 119
Score = 41 (19.5 bits), Expect = 5.5e-149, Sum P(3) = 5.5e-149
Identities = 26/101 (25%), Positives = 41/101 (40%)
Query: 39 PIRPRKSKTKARTAASQIARMFGPGKRTVRTSNKNSVPLN-LRRS-TRKRRISVNLEDYT 96
P R+ KT R A I P + R + + + RRS R+++ +++ D T
Sbjct: 121 PYNLRQRKTVDRYQAPPIV----PAHQKKRENTLFDIHRSPARRSHIRRKKHAIHSSDTT 176
Query: 97 DSSGSEDEDLMRPSYRPLRNRM--RNNMSQDELSPSKRKKV 135
S E S RNR N ++D S R++V
Sbjct: 177 SSDEERFERRKSKSMARARNRCLPMNFRAEDLASGILRERV 217
Score = 41 (19.5 bits), Expect = 5.5e-149, Sum P(3) = 5.5e-149
Identities = 25/105 (23%), Positives = 40/105 (38%)
Query: 78 NLRRSTR--KRRISVNLEDYTDSSGSEDEDLMRPSYRPLRNRMRNNMSQDE-LSPSKRKK 134
+LRR++ + V+ E + S ED D+ N N+ Q + + +
Sbjct: 78 SLRRNSYGIQNHHEVSTEGEEEESQEEDGDIEVEEAEGEENDRPYNLRQRKTVDRYQAPP 137
Query: 135 VVEAKPTPRREGL-----RPRRSMVATRKQLNLDSGDEQGSSEEK 174
+V A R L P R RK+ + S D S EE+
Sbjct: 138 IVPAHQKKRENTLFDIHRSPARRSHIRRKKHAIHSSDTTSSDEER 182
>UNIPROTKB|E9PSU0 [details] [associations]
symbol:LOC500625 "Protein LOC500625" species:10116 "Rattus
norvegicus" [GO:0005524 "ATP binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR001487 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 Pfam:PF00439 PRINTS:PR00503
PROSITE:PS00674 PROSITE:PS50014 SMART:SM00297 SMART:SM00382
GO:GO:0005524 GO:GO:0017111 Gene3D:1.20.920.10 SUPFAM:SSF47370
PROSITE:PS00633 InterPro:IPR018359 RGD:1566199 IPI:IPI00476926
Ensembl:ENSRNOT00000006877 ArrayExpress:E9PSU0 Uniprot:E9PSU0
Length = 1458
Score = 986 (352.1 bits), Expect = 6.0e-150, Sum P(3) = 6.0e-150
Identities = 190/314 (60%), Positives = 230/314 (73%)
Query: 365 ADIQPLQVDESVSFDDIGGLSEYIDALKEMVFFPLLYPDFFASYHITPPRGVLLCGPPGT 424
AD+ P+ +D+SV FD IGGLS +I ALKEMV FPLLYP+ F + I PPRG L GPPGT
Sbjct: 383 ADVDPMNIDKSVRFDSIGGLSHHIHALKEMVVFPLLYPEIFEKFKIQPPRGCLFYGPPGT 442
Query: 425 GKTLIARALACAASKAGQKVSFYMRKGADVLSKWVGEAERQLKLLFEEAQRNQPSIIFFD 484
GKTL+ARALA S+ +KV+F+MRKGAD LSKWVGE+ERQL+LLF++A +PSIIFFD
Sbjct: 443 GKTLVARALANECSQGDKKVAFFMRKGADCLSKWVGESERQLRLLFDQAYLMRPSIIFFD 502
Query: 485 EIDGLAPVRSSKQEQIHNSIVSTLLALMDGLDSRGQVVLIGATNRVDAIDGALRRPGRFD 544
EIDGLAPVRSS+Q+QIH+SIVSTLLALMDGLD+RG++V+IGATNR+D+ID ALRRPGRFD
Sbjct: 503 EIDGLAPVRSSRQDQIHSSIVSTLLALMDGLDNRGEIVVIGATNRLDSIDPALRRPGRFD 562
Query: 545 REFNFPLPGCEARAEILDIHTRKWKQPPSRELKSELAASCVGYCGADLKALCTEAAIRAF 604
REF F LP AR IL IHTR W S ELA CVGYCGAD+KALCTEAA+ A
Sbjct: 563 REFLFNLPDQRARKHILQIHTRDWNPKLSDAFLGELAEKCVGYCGADIKALCTEAALIAL 622
Query: 605 REKYPQVYTSDDKFLIDVDSVTVEKYHFIEAMSTITPAAHRGATVHSRPLSLVVAPCLQR 664
R +YPQ+Y S K +DV S+ + F AM I PA+ R + LS ++ P L+R
Sbjct: 623 RRRYPQIYASSHKLQLDVSSIVLSAQDFYRAMQNIVPASQRAVMSSGQALSPIIRPLLER 682
Query: 665 HLQKAMNYISDIFP 678
+ + IFP
Sbjct: 683 SFNNILAVLQKIFP 696
Score = 479 (173.7 bits), Expect = 6.0e-150, Sum P(3) = 6.0e-150
Identities = 111/277 (40%), Positives = 152/277 (54%)
Query: 699 PLVYRPRLLLCGSEGTG-VDHLGPAILHELEKFPVHSLGLPALLSDPSAKTPEEALVHIF 757
P YRPRLLL G G+G HL PA+LH LE+F VH L LPAL S SAKTPEE+ IF
Sbjct: 763 PTSYRPRLLLSGERGSGQTSHLAPALLHTLERFSVHRLDLPALYS-VSAKTPEESCAQIF 821
Query: 758 GEARRTTPSILYIPQFNLWWENAHXXXXXXXXXXXXXXXXXXPILLLGSSSVPLAEVEGD 817
EARRT PSI+Y+P WW+ PI LL +S +E+ +
Sbjct: 822 REARRTVPSIVYMPHIGDWWDAVSETVRATFLTLLQDIPSFSPIFLLSTSETMYSELPEE 881
Query: 818 PSTVFPLR--SVYQVEKPSTEDRSLFLGRLIEAAVSVVLEGRSKKPQESVS-LP-ELPKV 873
+F ++ V V++P EDR F LI S+ R ++ LP LP
Sbjct: 882 VKCIFRIQYEEVLYVQRPIEEDRRKFFQELILHQASMAPPRRKHTALRAMEVLPLALPCP 941
Query: 874 PTVESGPKASELKAKVEAEQHALRRLRMCLRDVCNRMLYDKRFSAFHYPVTDEDAPNYRS 933
P S + S ++ + E++ LR LR+ LRDV R+ DKRF+ F PV E+ +Y
Sbjct: 942 PRQLSESEKSRME---DQEENTLRELRLFLRDVTKRLATDKRFNIFSKPVDIEEVSDYLE 998
Query: 934 IIQNPMDLATLLQRVDSGHYVTCSAFLQDVDLIVTNA 970
+I+ PMDL+T++ ++D +Y+T FLQD+DLI +NA
Sbjct: 999 VIKEPMDLSTVITKIDKHNYLTAKDFLQDIDLICSNA 1035
Score = 51 (23.0 bits), Expect = 6.0e-150, Sum P(3) = 6.0e-150
Identities = 14/47 (29%), Positives = 23/47 (48%)
Query: 143 RREGLRPRRSMVATRKQLNLDSGDEQGSSEEKVGQDETENGNESDND 189
RR+ LR + +++ + G+E+ S EE G E E +ND
Sbjct: 234 RRKSLRRNSYGIQNHHEVSTE-GEEEESQEED-GDIEVEEAEGEEND 278
Score = 41 (19.5 bits), Expect = 6.8e-149, Sum P(3) = 6.8e-149
Identities = 26/101 (25%), Positives = 41/101 (40%)
Query: 39 PIRPRKSKTKARTAASQIARMFGPGKRTVRTSNKNSVPLN-LRRS-TRKRRISVNLEDYT 96
P R+ KT R A I P + R + + + RRS R+++ +++ D T
Sbjct: 280 PYNLRQRKTVDRYQAPPIV----PAHQKKRENTLFDIHRSPARRSHIRRKKHAIHSSDTT 335
Query: 97 DSSGSEDEDLMRPSYRPLRNRM--RNNMSQDELSPSKRKKV 135
S E S RNR N ++D S R++V
Sbjct: 336 SSDEERFERRKSKSMARARNRCLPMNFRAEDLASGILRERV 376
Score = 41 (19.5 bits), Expect = 6.8e-149, Sum P(3) = 6.8e-149
Identities = 25/105 (23%), Positives = 40/105 (38%)
Query: 78 NLRRSTR--KRRISVNLEDYTDSSGSEDEDLMRPSYRPLRNRMRNNMSQDE-LSPSKRKK 134
+LRR++ + V+ E + S ED D+ N N+ Q + + +
Sbjct: 237 SLRRNSYGIQNHHEVSTEGEEEESQEEDGDIEVEEAEGEENDRPYNLRQRKTVDRYQAPP 296
Query: 135 VVEAKPTPRREGL-----RPRRSMVATRKQLNLDSGDEQGSSEEK 174
+V A R L P R RK+ + S D S EE+
Sbjct: 297 IVPAHQKKRENTLFDIHRSPARRSHIRRKKHAIHSSDTTSSDEER 341
Score = 38 (18.4 bits), Expect = 1.6e-103, Sum P(3) = 1.6e-103
Identities = 6/24 (25%), Positives = 16/24 (66%)
Query: 666 LQKAMNYISDIFPPLGMSSELTKL 689
+++ +Y+ I P+ +S+ +TK+
Sbjct: 990 IEEVSDYLEVIKEPMDLSTVITKI 1013
Score = 37 (18.1 bits), Expect = 3.2e-40, Sum P(2) = 3.2e-40
Identities = 7/11 (63%), Positives = 9/11 (81%)
Query: 431 RALACAASKAG 441
RA +C A+KAG
Sbjct: 49 RAASCPAAKAG 59
>UNIPROTKB|Q9ULI0 [details] [associations]
symbol:ATAD2B "ATPase family AAA domain-containing protein
2B" species:9606 "Homo sapiens" [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0070577 "histone acetyl-lysine binding"
evidence=IDA] InterPro:IPR001487 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004 Pfam:PF00439
PRINTS:PR00503 PROSITE:PS00674 PROSITE:PS50014 SMART:SM00297
SMART:SM00382 GO:GO:0005524 eggNOG:COG0464 GO:GO:0017111
Gene3D:1.20.920.10 SUPFAM:SSF47370 PROSITE:PS00633
HOVERGEN:HBG080873 HOGENOM:HOG000034119 EMBL:AC009242 EMBL:AC066692
EMBL:AC079924 EMBL:AK094821 EMBL:AK131301 EMBL:AB033066
IPI:IPI00456004 IPI:IPI00739581 RefSeq:NP_001229267.1
RefSeq:NP_060022.1 UniGene:Hs.467862 PDB:2DKW PDB:3LXJ PDBsum:2DKW
PDBsum:3LXJ ProteinModelPortal:Q9ULI0 SMR:Q9ULI0 PhosphoSite:Q9ULI0
DMDM:296439432 PaxDb:Q9ULI0 PRIDE:Q9ULI0 Ensembl:ENST00000238789
GeneID:54454 KEGG:hsa:54454 UCSC:uc002rei.4 UCSC:uc002rek.4
CTD:54454 GeneCards:GC02M023971 HGNC:HGNC:29230 HPA:HPA034555
neXtProt:NX_Q9ULI0 PharmGKB:PA162377039 InParanoid:Q9ULI0
OMA:NAQDFYH OrthoDB:EOG49KFQ1 EvolutionaryTrace:Q9ULI0
GenomeRNAi:54454 NextBio:56685 ArrayExpress:Q9ULI0 Bgee:Q9ULI0
CleanEx:HS_ATAD2B Genevestigator:Q9ULI0 GermOnline:ENSG00000119778
GO:GO:0070577 InterPro:IPR018359 Uniprot:Q9ULI0
Length = 1458
Score = 985 (351.8 bits), Expect = 1.6e-149, Sum P(3) = 1.6e-149
Identities = 189/314 (60%), Positives = 230/314 (73%)
Query: 365 ADIQPLQVDESVSFDDIGGLSEYIDALKEMVFFPLLYPDFFASYHITPPRGVLLCGPPGT 424
AD+ P+ +D+SV FD IGGLS +I ALKEMV FPLLYP+ F + I PPRG L GPPGT
Sbjct: 386 ADVDPMNIDKSVRFDSIGGLSHHIHALKEMVVFPLLYPEIFEKFKIQPPRGCLFYGPPGT 445
Query: 425 GKTLIARALACAASKAGQKVSFYMRKGADVLSKWVGEAERQLKLLFEEAQRNQPSIIFFD 484
GKTL+ARALA S+ +KV+F+MRKGAD LSKWVGE+ERQL+LLF++A +PSIIFFD
Sbjct: 446 GKTLVARALANECSQGDKKVAFFMRKGADCLSKWVGESERQLRLLFDQAYLMRPSIIFFD 505
Query: 485 EIDGLAPVRSSKQEQIHNSIVSTLLALMDGLDSRGQVVLIGATNRVDAIDGALRRPGRFD 544
EIDGLAPVRSS+Q+QIH+SIVSTLLALMDGLD+RG++V+IGATNR+D+ID ALRRPGRFD
Sbjct: 506 EIDGLAPVRSSRQDQIHSSIVSTLLALMDGLDNRGEIVVIGATNRLDSIDPALRRPGRFD 565
Query: 545 REFNFPLPGCEARAEILDIHTRKWKQPPSRELKSELAASCVGYCGADLKALCTEAAIRAF 604
REF F LP +AR IL IHTR W S ELA CVGYCGAD+KALCTEAA+ A
Sbjct: 566 REFLFNLPDQKARKHILQIHTRDWNPKLSDAFLGELAEKCVGYCGADIKALCTEAALIAL 625
Query: 605 REKYPQVYTSDDKFLIDVDSVTVEKYHFIEAMSTITPAAHRGATVHSRPLSLVVAPCLQR 664
R +YPQ+Y S K +DV S+ + F AM I PA+ R LS ++ P L+R
Sbjct: 626 RRRYPQIYASSHKLQLDVSSIVLSAQDFYHAMQNIVPASQRAVMSSGHALSPIIRPLLER 685
Query: 665 HLQKAMNYISDIFP 678
+ + +FP
Sbjct: 686 SFNNILAVLQKVFP 699
Score = 476 (172.6 bits), Expect = 1.6e-149, Sum P(3) = 1.6e-149
Identities = 110/277 (39%), Positives = 152/277 (54%)
Query: 699 PLVYRPRLLLCGSEGTG-VDHLGPAILHELEKFPVHSLGLPALLSDPSAKTPEEALVHIF 757
P YRPRLLL G G+G HL PA+LH LE+F VH L LPAL S SAKTPEE+ IF
Sbjct: 762 PTSYRPRLLLSGERGSGQTSHLAPALLHTLERFSVHRLDLPALYS-VSAKTPEESCAQIF 820
Query: 758 GEARRTTPSILYIPQFNLWWENAHXXXXXXXXXXXXXXXXXXPILLLGSSSVPLAEVEGD 817
EARRT PSI+Y+P WWE PI LL +S +E+ +
Sbjct: 821 REARRTVPSIVYMPHIGDWWEAVSETVRATFLTLLQDIPSFSPIFLLSTSETMYSELPEE 880
Query: 818 PSTVFPLR--SVYQVEKPSTEDRSLFLGRLIEAAVSVVLEGRSKKPQESVS-LP-ELPKV 873
+F ++ V +++P EDR F LI S+ R ++ LP LP
Sbjct: 881 VKCIFRIQYEEVLYIQRPIEEDRRKFFQELILNQASMAPPRRKHAALCAMEVLPLALPSP 940
Query: 874 PTVESGPKASELKAKVEAEQHALRRLRMCLRDVCNRMLYDKRFSAFHYPVTDEDAPNYRS 933
P S + S ++ + E++ LR LR+ LRDV R+ DKRF+ F PV E+ +Y
Sbjct: 941 PRQLSESEKSRME---DQEENTLRELRLFLRDVTKRLATDKRFNIFSKPVDIEEVSDYLE 997
Query: 934 IIQNPMDLATLLQRVDSGHYVTCSAFLQDVDLIVTNA 970
+I+ PMDL+T++ ++D +Y+T FL+D+DLI +NA
Sbjct: 998 VIKEPMDLSTVITKIDKHNYLTAKDFLKDIDLICSNA 1034
Score = 51 (23.0 bits), Expect = 1.6e-149, Sum P(3) = 1.6e-149
Identities = 14/47 (29%), Positives = 23/47 (48%)
Query: 143 RREGLRPRRSMVATRKQLNLDSGDEQGSSEEKVGQDETENGNESDND 189
RR+ LR + +++ + G+E+ S EE G E E +ND
Sbjct: 237 RRKSLRRNSYGIQNHHEVSTE-GEEEESQEED-GDIEVEEAEGEEND 281
Score = 41 (19.5 bits), Expect = 1.8e-148, Sum P(3) = 1.8e-148
Identities = 26/101 (25%), Positives = 41/101 (40%)
Query: 39 PIRPRKSKTKARTAASQIARMFGPGKRTVRTSNKNSVPLN-LRRS-TRKRRISVNLEDYT 96
P R+ KT R A I P + R + + + RRS R+++ +++ D T
Sbjct: 283 PYNLRQRKTVDRYQAPPIV----PAHQKKRENTLFDIHRSPARRSHIRRKKHAIHSSDTT 338
Query: 97 DSSGSEDEDLMRPSYRPLRNRM--RNNMSQDELSPSKRKKV 135
S E S RNR N ++D S R++V
Sbjct: 339 SSDEERFERRKSKSMARARNRCLPMNFRAEDLASGILRERV 379
Score = 41 (19.5 bits), Expect = 1.8e-148, Sum P(3) = 1.8e-148
Identities = 25/105 (23%), Positives = 40/105 (38%)
Query: 78 NLRRSTR--KRRISVNLEDYTDSSGSEDEDLMRPSYRPLRNRMRNNMSQDE-LSPSKRKK 134
+LRR++ + V+ E + S ED D+ N N+ Q + + +
Sbjct: 240 SLRRNSYGIQNHHEVSTEGEEEESQEEDGDIEVEEAEGEENDRPYNLRQRKTVDRYQAPP 299
Query: 135 VVEAKPTPRREGL-----RPRRSMVATRKQLNLDSGDEQGSSEEK 174
+V A R L P R RK+ + S D S EE+
Sbjct: 300 IVPAHQKKRENTLFDIHRSPARRSHIRRKKHAIHSSDTTSSDEER 344
Score = 38 (18.4 bits), Expect = 2.1e-103, Sum P(3) = 2.1e-103
Identities = 6/24 (25%), Positives = 16/24 (66%)
Query: 666 LQKAMNYISDIFPPLGMSSELTKL 689
+++ +Y+ I P+ +S+ +TK+
Sbjct: 989 IEEVSDYLEVIKEPMDLSTVITKI 1012
Score = 37 (18.1 bits), Expect = 6.9e-40, Sum P(2) = 6.9e-40
Identities = 7/11 (63%), Positives = 9/11 (81%)
Query: 431 RALACAASKAG 441
RA +C A+KAG
Sbjct: 49 RAASCPAAKAG 59
>UNIPROTKB|Q6PL18 [details] [associations]
symbol:ATAD2 "ATPase family AAA domain-containing protein
2" species:9606 "Homo sapiens" [GO:0005524 "ATP binding"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0016887 "ATPase activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IDA] [GO:0005730
"nucleolus" evidence=IDA] InterPro:IPR001487 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004 Pfam:PF00439
PRINTS:PR00503 PROSITE:PS00674 PROSITE:PS50014 SMART:SM00297
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 Gene3D:1.25.10.10
InterPro:IPR011989 GO:GO:0006355 GO:GO:0006200 GO:GO:0006351
GO:GO:0016887 eggNOG:COG0464 Gene3D:1.20.920.10 SUPFAM:SSF47370
PROSITE:PS00633 EMBL:AY598335 EMBL:CR749832 EMBL:AL833653
EMBL:BC010686 EMBL:BC019909 EMBL:BC113656 EMBL:AK097133
EMBL:AF118088 IPI:IPI00170548 IPI:IPI00470801 RefSeq:NP_054828.2
UniGene:Hs.370834 PDB:3DAI PDBsum:3DAI ProteinModelPortal:Q6PL18
SMR:Q6PL18 DIP:DIP-46197N STRING:Q6PL18 PhosphoSite:Q6PL18
DMDM:74762365 PaxDb:Q6PL18 PRIDE:Q6PL18 DNASU:29028
Ensembl:ENST00000287394 GeneID:29028 KEGG:hsa:29028 UCSC:uc003yqh.4
CTD:29028 GeneCards:GC08M124401 H-InvDB:HIX0007764 HGNC:HGNC:30123
HPA:CAB056158 HPA:HPA019860 HPA:HPA029424 MIM:611941
neXtProt:NX_Q6PL18 PharmGKB:PA134895566 HOVERGEN:HBG080873
InParanoid:Q6PL18 OMA:PSVYENG OrthoDB:EOG441Q9S PhylomeDB:Q6PL18
ChiTaRS:ATAD2 EvolutionaryTrace:Q6PL18 GenomeRNAi:29028
NextBio:51959 ArrayExpress:Q6PL18 Bgee:Q6PL18 CleanEx:HS_ATAD2
Genevestigator:Q6PL18 GermOnline:ENSG00000156802 Uniprot:Q6PL18
Length = 1390
Score = 998 (356.4 bits), Expect = 2.2e-149, Sum P(3) = 2.2e-149
Identities = 190/314 (60%), Positives = 237/314 (75%)
Query: 365 ADIQPLQVDESVSFDDIGGLSEYIDALKEMVFFPLLYPDFFASYHITPPRGVLLCGPPGT 424
AD+ P+Q+D SV FD +GGLS +I ALKEMV FPLLYP+ F + I PPRG L GPPGT
Sbjct: 412 ADVDPMQLDSSVRFDSVGGLSNHIAALKEMVVFPLLYPEVFEKFKIQPPRGCLFYGPPGT 471
Query: 425 GKTLIARALACAASKAGQKVSFYMRKGADVLSKWVGEAERQLKLLFEEAQRNQPSIIFFD 484
GKTL+ARALA S+ ++V+F+MRKGAD LSKWVGE+ERQL+LLF++A + +PSIIFFD
Sbjct: 472 GKTLVARALANECSQGDKRVAFFMRKGADCLSKWVGESERQLRLLFDQAYQMRPSIIFFD 531
Query: 485 EIDGLAPVRSSKQEQIHNSIVSTLLALMDGLDSRGQVVLIGATNRVDAIDGALRRPGRFD 544
EIDGLAPVRSS+Q+QIH+SIVSTLLALMDGLDSRG++V+IGATNR+D+ID ALRRPGRFD
Sbjct: 532 EIDGLAPVRSSRQDQIHSSIVSTLLALMDGLDSRGEIVVIGATNRLDSIDPALRRPGRFD 591
Query: 545 REFNFPLPGCEARAEILDIHTRKWKQPPSRELKSELAASCVGYCGADLKALCTEAAIRAF 604
REF F LP EAR EIL IHTR W P ELA +CVGYCGAD+K++C EAA+ A
Sbjct: 592 REFLFSLPDKEARKEILKIHTRDWNPKPLDTFLEELAENCVGYCGADIKSICAEAALCAL 651
Query: 605 REKYPQVYTSDDKFLIDVDSVTVEKYHFIEAMSTITPAAHRGATVHSRPLSLVVAPCLQR 664
R +YPQ+YT+ +K +D+ S+ + F AM + PA+ R T + LS VV P LQ
Sbjct: 652 RRRYPQIYTTSEKLQLDLSSINISAKDFEVAMQKMIPASQRAVTSPGQALSTVVKPLLQN 711
Query: 665 HLQKAMNYISDIFP 678
+ K + + +FP
Sbjct: 712 TVDKILEALQRVFP 725
Score = 432 (157.1 bits), Expect = 2.2e-149, Sum P(3) = 2.2e-149
Identities = 98/279 (35%), Positives = 152/279 (54%)
Query: 699 PLVYRPRLLLCGSEGTGV-DHLGPAILHELEKFPVHSLGLPALLSDPSAKTPEEALVHIF 757
P+ +RPR+L+ G G G HL PA++H LEKF V++L +P L S +PEE +
Sbjct: 788 PMSFRPRILIVGEPGFGQGSHLAPAVIHALEKFTVYTLDIPVLFG-VSTTSPEETCAQVI 846
Query: 758 GEARRTTPSILYIPQFNLWWENAHXXXXXXXXXXXXXXXXXXPILLLGSSSVPLAEVEGD 817
EA+RT PSI+Y+P ++WWE P+LLL +S P + + +
Sbjct: 847 REAKRTAPSIVYVPHIHVWWEIVGPTLKATFTTLLQNIPSFAPVLLLATSDKPHSALPEE 906
Query: 818 PSTVFPLRS---VYQVEKPSTEDRSLFLGRLI--EAAVSVVLEGRSKKPQESVSLPELPK 872
+F +R ++ V+ P E+R+ F LI +AA + SKK +L LP
Sbjct: 907 VQELF-IRDYGEIFNVQLPDKEERTKFFEDLILKQAAKPPI----SKKKAVLQALEVLPV 961
Query: 873 VPTVESGP-KASELKAKVEAEQHALRRLRMCLRDVCNRMLYDKRFSAFHYPVTDEDAPNY 931
P E A E+K E E+ R LR+ LR+V +R+ DKRF F PV ++ P+Y
Sbjct: 962 APPPEPRSLTAEEVKRLEEQEEDTFRELRIFLRNVTHRLAIDKRFRVFTKPVDPDEVPDY 1021
Query: 932 RSIIQNPMDLATLLQRVDSGHYVTCSAFLQDVDLIVTNA 970
++I+ PMDL++++ ++D Y+T +L+D+DLI +NA
Sbjct: 1022 VTVIKQPMDLSSVISKIDLHKYLTVKDYLRDIDLICSNA 1060
Score = 66 (28.3 bits), Expect = 2.2e-149, Sum P(3) = 2.2e-149
Identities = 28/100 (28%), Positives = 40/100 (40%)
Query: 33 TYLYYNPIRPRKSKTKARTAASQIARMFGPGKRTVRTSNKNSVPLNLRRSTRKRRISVNL 92
T Y P+ + + K S A P + R S+ +R R+R +++
Sbjct: 302 TVYYQAPLEKPRHQRKPNIFYSGPA---SPARPRYRLSSAGPRSPYCKRMNRRRH-AIHS 357
Query: 93 EDYTDSSGSEDEDLMRPSYRPLRNRMRN-----NMSQDEL 127
D T SS SEDE + RNR N N +DEL
Sbjct: 358 SDSTSSSSSEDEQHFERRRKRSRNRAINRCLPLNFRKDEL 397
Score = 64 (27.6 bits), Expect = 3.6e-149, Sum P(3) = 3.6e-149
Identities = 59/279 (21%), Positives = 107/279 (38%)
Query: 9 GDGSVPGPVRTSDRLR-----RRPKILGRTYLYYNPIRPRKSKTKARTAASQIARMFGPG 63
GDGS V T R R R+ + + + R Q+AR
Sbjct: 57 GDGSSVKEVETYHRTRALRSLRKDAQNSSDSSFEKNVEITEQLANGRHFTRQLARQQADK 116
Query: 64 KRTVRTSNKNSVPLNLRRSTRKRRISVNLEDYTDSSGSEDEDLMRPSYRPLRNR---MRN 120
K+ +K +P+ RS R R I + E + +G + +R S R +R+R +
Sbjct: 117 KKEEHREDK-VIPVT--RSLRARNIVQSTEHLHEDNGDVE---VRRSCR-IRSRYSGVNQ 169
Query: 121 NMSQDELSPSKRKKVVEAKPTP---RREGLRPRRSM------------VATR-KQLNLDS 164
+M D+L + + V++ RR+ +R + + TR KQ ++
Sbjct: 170 SMLFDKLITNTAEAVLQKMDDMKKMRRQRMRELEDLGVFNETEESNLNMYTRGKQKDIQR 229
Query: 165 GDEQGSSEEKVGQDETENGNESDNDADDGQNEIXXXXXXXXXXXXXXXXXXXXXXXXXXX 224
DE+ + ++ + +E G + +++ DDG++E
Sbjct: 230 TDEETTDNQEGSVESSEEGEDQEHE-DDGEDE--DDEDDDDDDDDDDDDDDEDDEDEEDG 286
Query: 225 XQEGRRRYDLRNR-AEVRRLSVEEGKQRPRSPRRVLHQG 262
+E ++RY LR R A V + E + R P + + G
Sbjct: 287 EEENQKRYYLRQRKATVYYQAPLEKPRHQRKPN-IFYSG 324
>ZFIN|ZDB-GENE-110411-210 [details] [associations]
symbol:atad2b "ATPase family, AAA domain containing
2B" species:7955 "Danio rerio" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR001487 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 Pfam:PF00439 PRINTS:PR00503
PROSITE:PS00674 PROSITE:PS50014 SMART:SM00297 SMART:SM00382
ZFIN:ZDB-GENE-110411-210 GO:GO:0005524 GO:GO:0017111
Gene3D:1.20.920.10 SUPFAM:SSF47370 PROSITE:PS00633
InterPro:IPR018359 GeneTree:ENSGT00550000074694 EMBL:CABZ01035125
EMBL:CABZ01035126 EMBL:CABZ01035127 EMBL:CABZ01035128
EMBL:CABZ01035129 EMBL:CABZ01035130 EMBL:CABZ01035131
EMBL:CABZ01035132 EMBL:CABZ01035133 EMBL:CABZ01035134
EMBL:CABZ01035135 EMBL:CABZ01035136 EMBL:CABZ01035137
EMBL:CABZ01035138 EMBL:FP103080 IPI:IPI00504895
Ensembl:ENSDART00000085416 ArrayExpress:E7FE14 Bgee:E7FE14
Uniprot:E7FE14
Length = 1402
Score = 966 (345.1 bits), Expect = 4.0e-149, Sum P(5) = 4.0e-149
Identities = 186/314 (59%), Positives = 233/314 (74%)
Query: 365 ADIQPLQVDESVSFDDIGGLSEYIDALKEMVFFPLLYPDFFASYHITPPRGVLLCGPPGT 424
AD+ P+ +D SV FD +GGL+ +I +LKEMV FPLLYP F + I PPRG L GPPGT
Sbjct: 381 ADVDPMNLDTSVKFDSVGGLTHHIQSLKEMVVFPLLYPQVFEKFKIQPPRGCLFYGPPGT 440
Query: 425 GKTLIARALACAASKAGQKVSFYMRKGADVLSKWVGEAERQLKLLFEEAQRNQPSIIFFD 484
GKTL+ARALA S+ +KVSF+MRKGAD LSKWVGE+ERQL+LLF++A +PSIIFFD
Sbjct: 441 GKTLVARALANECSQGDRKVSFFMRKGADCLSKWVGESERQLRLLFDQAYLMRPSIIFFD 500
Query: 485 EIDGLAPVRSSKQEQIHNSIVSTLLALMDGLDSRGQVVLIGATNRVDAIDGALRRPGRFD 544
EIDGLAPVRSS+Q+QIH+SIVSTLLALMDGLDSRG++V+IGATNR+D+ID ALRRPGRFD
Sbjct: 501 EIDGLAPVRSSRQDQIHSSIVSTLLALMDGLDSRGEIVVIGATNRLDSIDPALRRPGRFD 560
Query: 545 REFNFPLPGCEARAEILDIHTRKWKQPPSRELKSELAASCVGYCGADLKALCTEAAIRAF 604
REF F LP +AR IL+IHTR W + ELA CVGYCGAD+KALCTEAA+ A
Sbjct: 561 REFLFNLPDKKARKHILEIHTRDWSPKLAEPFIDELAERCVGYCGADIKALCTEAALAAL 620
Query: 605 REKYPQVYTSDDKFLIDVDSVTVEKYHFIEAMSTITPAAHRGATVHSRPLSLVVAPCLQR 664
R +YPQ+Y S ++ +DV S+ + F A+ +I PA R + LS V+ P L+
Sbjct: 621 RRRYPQIYGSSQRYQLDVASIVLGPQDFGRALRSIVPAGQRALAPPGQALSCVLKPLLEP 680
Query: 665 HLQKAMNYISDIFP 678
L + + ++ +FP
Sbjct: 681 TLNQTLACLTRVFP 694
Score = 435 (158.2 bits), Expect = 4.0e-149, Sum P(5) = 4.0e-149
Identities = 107/278 (38%), Positives = 145/278 (52%)
Query: 699 PLVYRPRLLLCGSEGTGVD-HLGPAILHELEKFPVHSLGLPALLSDPSAKTPEEALVHIF 757
P YRPRLLL G +G G HL PA+LH LEKF VH L LP L S SAKTPEE+ +F
Sbjct: 760 PTSYRPRLLLTGPQGAGQSTHLAPALLHHLEKFTVHRLDLPTLYS-VSAKTPEESCAQVF 818
Query: 758 GEARRTTPSILYIPQFNLWWENAHXXXXXXXXXXXXXXXXXXPILLLGSSSVPLAEVEGD 817
EARR PSI+Y+P + WWE P+L+L ++ ++ +
Sbjct: 819 REARRCVPSIIYMPHISAWWEAISETVKSSFLMLLQDVPSFTPLLILATAESVYQQLPDE 878
Query: 818 PSTVFPLRS---VYQVEKPSTEDRSLFLGRLI--EAAVSVVLEGRSKKPQESVSLPELPK 872
+F RS V+ + P E R F LI +AA + +S E ++L E P
Sbjct: 879 LKCIFS-RSYGEVFCLSMPGEEARRKFFSDLILVQAAKAPPRRRKSACALEVLTLSEDPG 937
Query: 873 VPTVESGPKASELKAKVEAEQHALRRLRMCLRDVCNRMLYDKRFSAFHYPVTDEDAPNYR 932
P S A E + E E++ LR LR+ LRDV R+ DKRF F PV E+ +Y
Sbjct: 938 -PRQLS---AEEQRRLEEQEENTLRELRLFLRDVTKRLATDKRFQIFSKPVDIEEVSDYL 993
Query: 933 SIIQNPMDLATLLQRVDSGHYVTCSAFLQDVDLIVTNA 970
+I PMDL+ ++ ++D Y+ FL D+DLI +NA
Sbjct: 994 EVITQPMDLSAIMMKIDKHKYMVAKDFLADIDLICSNA 1031
Score = 60 (26.2 bits), Expect = 8.7e-147, Sum P(4) = 8.7e-147
Identities = 22/97 (22%), Positives = 41/97 (42%)
Query: 93 EDYTDSSGSEDEDLMRPSYRPLRNRMRNNMSQDELSPSKRKKVVEAKPTPRREGLRP-RR 151
+D D G E E+ + RP R R + + E P + ++K + P RR
Sbjct: 257 DDDEDDEGDEAEEAGEENDRPYNLRQRKTVQRYEAPPIEPVNRKQSKGSLFDTHRSPARR 316
Query: 152 SMVATRKQLNLDSGDEQGSSEEKVGQDETENGNESDN 188
S + +K S S EE+ + ++++ + + N
Sbjct: 317 SHIRIKKHAIHSSESTSSSDEERFERRKSKSMSRARN 353
Score = 57 (25.1 bits), Expect = 4.0e-149, Sum P(5) = 4.0e-149
Identities = 24/90 (26%), Positives = 39/90 (43%)
Query: 110 SYRPLRNRMRNNMSQD-ELSPSKRKKVVEAKPTPRRE--GLRPRRSMVATRKQLNLDSGD 166
S R R R M D EL V+ + + RR G++ +++ K D +
Sbjct: 181 SIRQSREVERLRMWTDTELENMDMYSRVKRRKSLRRNTYGMQSHHKVMSKSK----DPEE 236
Query: 167 EQGSSEEKVGQDETENGNESDNDADDGQNE 196
E+G+ E +E E+ D+D DD +E
Sbjct: 237 EEGTEESNEEGEEDEDVEADDDDEDDEGDE 266
Score = 54 (24.1 bits), Expect = 2.9e-146, Sum P(4) = 2.9e-146
Identities = 22/73 (30%), Positives = 33/73 (45%)
Query: 65 RTVRTSNKNSVPLNLRRS-TRKRRI--SVNLEDYTDSSGSEDEDLMRPSYRPLRNRMRNN 121
RT R+S +N+ L+ S RKR + +L + S + R S P R R +
Sbjct: 20 RT-RSSQRNNPNLDEHNSRVRKRETPAAYSLRQPKEPSSDANSSSPRLSPPPKRTRRQTP 78
Query: 122 MSQDELSPSKRKK 134
S + SPS + K
Sbjct: 79 PSSTDTSPSPQSK 91
Score = 44 (20.5 bits), Expect = 3.3e-145, Sum P(4) = 3.3e-145
Identities = 29/128 (22%), Positives = 49/128 (38%)
Query: 69 TSNKNSVPLNLRRSTRKRRISVNLEDYTDSSGSEDEDLMRPSYRPLRNRMRNNMSQDELS 128
+ +K S P R+ +R + NL+++ + +P N S LS
Sbjct: 8 SEHKPSSPFISGRTRSSQRNNPNLDEHNSRVRKRETPAAYSLRQPKEPSSDANSSSPRLS 67
Query: 129 PS-KRKK------VVEAKPTPRREGLRPRRSMV--ATRKQLN-LDSGDEQGSSEEKVGQD 178
P KR + + P+P+ +G R +M TR L +G G + G D
Sbjct: 68 PPPKRTRRQTPPSSTDTSPSPQSKGQRGSWTMSKHCTRLSTGALQNGHTIGRMSLR-G-D 125
Query: 179 ETENGNES 186
T G+ +
Sbjct: 126 STSGGDHA 133
Score = 40 (19.1 bits), Expect = 1.7e-36, Sum P(3) = 1.7e-36
Identities = 11/46 (23%), Positives = 22/46 (47%)
Query: 468 LLFEEAQRNQPSIIFFDEIDGLAPVRSSKQEQIHNSIVSTLLALMD 513
LLF++ + + E+D ++ +R S++ + T L MD
Sbjct: 159 LLFDQLVNSTAEAVL-QEMDNISSIRQSREVERLRMWTDTELENMD 203
Score = 38 (18.4 bits), Expect = 4.0e-149, Sum P(5) = 4.0e-149
Identities = 8/17 (47%), Positives = 11/17 (64%)
Query: 226 QEGRRRYDLRNRAEVRR 242
+E R Y+LR R V+R
Sbjct: 272 EENDRPYNLRQRKTVQR 288
Score = 37 (18.1 bits), Expect = 4.0e-149, Sum P(5) = 4.0e-149
Identities = 11/32 (34%), Positives = 16/32 (50%)
Query: 43 RKSKTKARTAASQIARMFGPGKRTVRTSNKNS 74
R+ K + A S R+ P KRT R + +S
Sbjct: 50 RQPKEPSSDANSSSPRLSPPPKRTRRQTPPSS 81
Score = 37 (18.1 bits), Expect = 1.7e-107, Sum P(5) = 1.7e-107
Identities = 14/54 (25%), Positives = 24/54 (44%)
Query: 862 QESVSLPELPKVPTVESGPKASELKAKVEAEQHALRRLRMCLRDVCNRMLYDKR 915
QE+V LP P + KA +A V++E ++ L ++ +Y R
Sbjct: 1327 QEAVQLPPPPDLVVDHQRLKALLEQAVVKSEGFSVDHLERVF-SALSQCIYQHR 1379
>UNIPROTKB|F1P871 [details] [associations]
symbol:ATAD2B "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR001487 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 Pfam:PF00439 PRINTS:PR00503
PROSITE:PS00674 PROSITE:PS50014 SMART:SM00297 SMART:SM00382
GO:GO:0005524 GO:GO:0017111 Gene3D:1.20.920.10 SUPFAM:SSF47370
PROSITE:PS00633 OMA:NAQDFYH InterPro:IPR018359
GeneTree:ENSGT00550000074694 EMBL:AAEX03010776 EMBL:AAEX03010777
EMBL:AAEX03010778 Ensembl:ENSCAFT00000006311 Uniprot:F1P871
Length = 1464
Score = 985 (351.8 bits), Expect = 1.0e-148, Sum P(3) = 1.0e-148
Identities = 189/314 (60%), Positives = 230/314 (73%)
Query: 365 ADIQPLQVDESVSFDDIGGLSEYIDALKEMVFFPLLYPDFFASYHITPPRGVLLCGPPGT 424
AD+ P+ +D+SV FD IGGLS +I ALKEMV FPLLYP+ F + I PPRG L GPPGT
Sbjct: 389 ADVDPMNIDKSVRFDSIGGLSHHIHALKEMVVFPLLYPEIFEKFKIQPPRGCLFYGPPGT 448
Query: 425 GKTLIARALACAASKAGQKVSFYMRKGADVLSKWVGEAERQLKLLFEEAQRNQPSIIFFD 484
GKTL+ARALA S+ +KV+F+MRKGAD LSKWVGE+ERQL+LLF++A +PSIIFFD
Sbjct: 449 GKTLVARALANECSQGDKKVAFFMRKGADCLSKWVGESERQLRLLFDQAYLMRPSIIFFD 508
Query: 485 EIDGLAPVRSSKQEQIHNSIVSTLLALMDGLDSRGQVVLIGATNRVDAIDGALRRPGRFD 544
EIDGLAPVRSS+Q+QIH+SIVSTLLALMDGLD+RG++V+IGATNR+D+ID ALRRPGRFD
Sbjct: 509 EIDGLAPVRSSRQDQIHSSIVSTLLALMDGLDNRGEIVVIGATNRLDSIDPALRRPGRFD 568
Query: 545 REFNFPLPGCEARAEILDIHTRKWKQPPSRELKSELAASCVGYCGADLKALCTEAAIRAF 604
REF F LP +AR IL IHTR W S ELA CVGYCGAD+KALCTEAA+ A
Sbjct: 569 REFLFNLPDQKARKHILQIHTRDWNPKLSDAFLGELAEKCVGYCGADIKALCTEAALIAL 628
Query: 605 REKYPQVYTSDDKFLIDVDSVTVEKYHFIEAMSTITPAAHRGATVHSRPLSLVVAPCLQR 664
R +YPQ+Y S K +DV S+ + F AM I PA+ R LS ++ P L+R
Sbjct: 629 RRRYPQIYASSHKLQLDVSSIVLNAQDFYHAMQNIVPASQRAVMSSGHALSPIIKPLLER 688
Query: 665 HLQKAMNYISDIFP 678
+ + +FP
Sbjct: 689 SFNNILAVLQKVFP 702
Score = 478 (173.3 bits), Expect = 1.0e-148, Sum P(3) = 1.0e-148
Identities = 110/276 (39%), Positives = 150/276 (54%)
Query: 699 PLVYRPRLLLCGSEGTG-VDHLGPAILHELEKFPVHSLGLPALLSDPSAKTPEEALVHIF 757
P YRPRLLL G G+G HL PA+LH LEKF VH L LPAL S SAKTPEE+ IF
Sbjct: 766 PTSYRPRLLLSGERGSGQTSHLAPALLHTLEKFSVHRLDLPALYS-VSAKTPEESCAQIF 824
Query: 758 GEARRTTPSILYIPQFNLWWENAHXXXXXXXXXXXXXXXXXXPILLLGSSSVPLAEVEGD 817
EARRT PSI+Y+P WWE PI LL +S +E+ +
Sbjct: 825 REARRTVPSIVYMPHIGDWWEAVSETVRATFLTLLQDIPSFSPIFLLSTSETMYSELPEE 884
Query: 818 PSTVFPLR--SVYQVEKPSTEDRSLFLGRLIEAAVSVVLEGRSKKPQESVSLPELP-KVP 874
+F ++ V +++P EDR F LI S+ R K ++ LP +P
Sbjct: 885 VKCIFRIQYEEVLYIQRPIEEDRRKFFQELILNQASMAPPRR--KHTGLCAMEVLPLALP 942
Query: 875 TVESGPKASELKAKVEAEQHALRRLRMCLRDVCNRMLYDKRFSAFHYPVTDEDAPNYRSI 934
+ SE + E++ LR LR+ LRDV R+ DKRF+ F PV E+ +Y +
Sbjct: 943 SPPRQLSESEKNRMEDQEENTLRELRLFLRDVTKRLATDKRFNIFSKPVDIEEVSDYLEV 1002
Query: 935 IQNPMDLATLLQRVDSGHYVTCSAFLQDVDLIVTNA 970
I+ PMDL+T++ ++D +Y+T FL+D+DLI +NA
Sbjct: 1003 IKEPMDLSTVITKIDKHNYLTAKDFLKDIDLICSNA 1038
Score = 42 (19.8 bits), Expect = 1.0e-148, Sum P(3) = 1.0e-148
Identities = 14/51 (27%), Positives = 25/51 (49%)
Query: 143 RREGLRPRRSMVATRKQLNLDSGDEQ--GS--SEEKVGQDETENGNESDND 189
RR+ LR + +++ + G+E+ G S+E+ G E E +ND
Sbjct: 234 RRKSLRRNSYGIQNHHEVSTE-GEEEVWGKLESQEEDGDIEVEEAEGEEND 283
Score = 42 (19.8 bits), Expect = 1.0e-148, Sum P(3) = 1.0e-148
Identities = 25/99 (25%), Positives = 38/99 (38%)
Query: 39 PIRPRKSKTKARTAASQIARMFGPGKRTVRTSNKNSVPLNLRRSTRKRRISVNLEDYTDS 98
P R+ KT R A I KR + + P R R+++ +++ D T S
Sbjct: 285 PYNLRQRKTVDRYQAPPIEVPAHQKKRENTLFDIHRSPAR-RSHIRRKKHAIHSSDTTSS 343
Query: 99 SGSEDEDLMRPSYRPLRNRM--RNNMSQDELSPSKRKKV 135
E S RNR N ++D S R++V
Sbjct: 344 DEERFERRKSKSMARARNRCLPMNFRAEDLASGILRERV 382
Score = 40 (19.1 bits), Expect = 1.7e-148, Sum P(3) = 1.7e-148
Identities = 29/125 (23%), Positives = 46/125 (36%)
Query: 59 MFGPGKRTVRTSNKNSVPLNLRR--STR-KRRISVNLEDYTDSSGSEDEDLM-RPSYRPL 114
M+ KR ++ +NS + ST + + LE + E E+ + RP
Sbjct: 227 MYSRVKRRRKSLRRNSYGIQNHHEVSTEGEEEVWGKLESQEEDGDIEVEEAEGEENDRPY 286
Query: 115 RNRMRNNMSQDELSPSKRKKVVEAKPTPRREGL-----RPRRSMVATRKQLNLDSGDEQG 169
R R + + + P + V A R L P R RK+ + S D
Sbjct: 287 NLRQRKTVDRYQAPPIE----VPAHQKKRENTLFDIHRSPARRSHIRRKKHAIHSSDTTS 342
Query: 170 SSEEK 174
S EE+
Sbjct: 343 SDEER 347
Score = 38 (18.4 bits), Expect = 2.1e-102, Sum P(3) = 2.1e-102
Identities = 6/24 (25%), Positives = 16/24 (66%)
Query: 666 LQKAMNYISDIFPPLGMSSELTKL 689
+++ +Y+ I P+ +S+ +TK+
Sbjct: 993 IEEVSDYLEVIKEPMDLSTVITKI 1016
Score = 37 (18.1 bits), Expect = 1.2e-39, Sum P(3) = 1.2e-39
Identities = 12/63 (19%), Positives = 26/63 (41%)
Query: 601 IRAFREKYPQVYTSD-DKFLIDVDSVTVEKYHFIEAMSTITPAAHRGATVHSRPLSLVVA 659
+ ++ +P S DK D++++ ++ A+S + H G+ + V
Sbjct: 694 LAVLQKVFPHAEISQSDKKEADIETLILDDSEDENALSIFETSCHSGSPKKQSSAAAVHK 753
Query: 660 PCL 662
P L
Sbjct: 754 PYL 756
>UNIPROTKB|F1MEY1 [details] [associations]
symbol:ATAD2B "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0070577 "histone acetyl-lysine binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR001487 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 Pfam:PF00439 PRINTS:PR00503
PROSITE:PS00674 PROSITE:PS50014 SMART:SM00297 SMART:SM00382
GO:GO:0005524 GO:GO:0017111 Gene3D:1.20.920.10 SUPFAM:SSF47370
PROSITE:PS00633 OMA:NAQDFYH InterPro:IPR018359
GeneTree:ENSGT00550000074694 EMBL:DAAA02031678 EMBL:DAAA02031679
EMBL:DAAA02031680 EMBL:DAAA02031681 IPI:IPI01003034
Ensembl:ENSBTAT00000022935 Uniprot:F1MEY1
Length = 1465
Score = 985 (351.8 bits), Expect = 1.0e-148, Sum P(3) = 1.0e-148
Identities = 189/314 (60%), Positives = 230/314 (73%)
Query: 365 ADIQPLQVDESVSFDDIGGLSEYIDALKEMVFFPLLYPDFFASYHITPPRGVLLCGPPGT 424
AD+ P+ +D+SV FD IGGLS +I ALKEMV FPLLYP+ F + I PPRG L GPPGT
Sbjct: 391 ADVDPMNIDKSVRFDSIGGLSHHIHALKEMVVFPLLYPEIFEKFKIQPPRGCLFYGPPGT 450
Query: 425 GKTLIARALACAASKAGQKVSFYMRKGADVLSKWVGEAERQLKLLFEEAQRNQPSIIFFD 484
GKTL+ARALA S+ +KV+F+MRKGAD LSKWVGE+ERQL+LLF++A +PSIIFFD
Sbjct: 451 GKTLVARALANECSQGDKKVAFFMRKGADCLSKWVGESERQLRLLFDQAYLMRPSIIFFD 510
Query: 485 EIDGLAPVRSSKQEQIHNSIVSTLLALMDGLDSRGQVVLIGATNRVDAIDGALRRPGRFD 544
EIDGLAPVRSS+Q+QIH+SIVSTLLALMDGLD+RG++V+IGATNR+D+ID ALRRPGRFD
Sbjct: 511 EIDGLAPVRSSRQDQIHSSIVSTLLALMDGLDNRGEIVVIGATNRLDSIDPALRRPGRFD 570
Query: 545 REFNFPLPGCEARAEILDIHTRKWKQPPSRELKSELAASCVGYCGADLKALCTEAAIRAF 604
REF F LP +AR IL IHTR W S ELA CVGYCGAD+KALCTEAA+ A
Sbjct: 571 REFLFNLPDQKARKHILQIHTRDWNPKLSDAFLGELAEKCVGYCGADIKALCTEAALIAL 630
Query: 605 REKYPQVYTSDDKFLIDVDSVTVEKYHFIEAMSTITPAAHRGATVHSRPLSLVVAPCLQR 664
R +YPQ+Y S K +DV S+ + F AM I PA+ R LS ++ P L+R
Sbjct: 631 RRRYPQIYASSHKLQLDVSSIVLNAQDFYHAMQNIVPASQRAVMSSGHALSPIIKPLLER 690
Query: 665 HLQKAMNYISDIFP 678
+ + +FP
Sbjct: 691 SFNNILAVLQKVFP 704
Score = 476 (172.6 bits), Expect = 1.0e-148, Sum P(3) = 1.0e-148
Identities = 112/277 (40%), Positives = 153/277 (55%)
Query: 699 PLVYRPRLLLCGSEGTG-VDHLGPAILHELEKFPVHSLGLPALLSDPSAKTPEEALVHIF 757
P YRPRLLL G G+G HL PA+LH LEKF VH L LPAL S SAKTPEE+ IF
Sbjct: 767 PTSYRPRLLLSGERGSGQTSHLAPALLHTLEKFSVHRLDLPALYS-VSAKTPEESCAQIF 825
Query: 758 GEARRTTPSILYIPQFNLWWENAHXXXXXXXXXXXXXXXXXXPILLLGSSSVPLAEVEGD 817
EARRT PSI+Y+P WWE PI LL +S +E+ +
Sbjct: 826 REARRTVPSIVYMPHIGDWWEAVSETVRATFLTLLQDIPSFSPIFLLSTSETMYSELPEE 885
Query: 818 PSTVFPLR--SVYQVEKPSTEDRSLFLGRLIEAAVSVVLEGRSKKPQESVSLPELP-KVP 874
+F ++ V +++P EDR F LI S+ R K ++ LP +P
Sbjct: 886 VKCIFRIQYEEVLYIQRPIEEDRRKFFQELILNQASMAPPRR--KHTGLCAMEVLPLALP 943
Query: 875 TVESGPKASELKAKVE-AEQHALRRLRMCLRDVCNRMLYDKRFSAFHYPVTDEDAPNYRS 933
+ SE K ++E E++ LR LR+ LRDV R+ DKRF+ F PV E+ +Y
Sbjct: 944 SPPRQLSESE-KIRMEDQEENTLRELRLFLRDVTKRLATDKRFNIFSKPVDIEEVSDYLE 1002
Query: 934 IIQNPMDLATLLQRVDSGHYVTCSAFLQDVDLIVTNA 970
+I+ PMDL+T++ ++D +Y+T FL+D+DLI +NA
Sbjct: 1003 VIKEPMDLSTVITKIDKHNYLTAKDFLKDIDLICSNA 1039
Score = 44 (20.5 bits), Expect = 1.0e-148, Sum P(3) = 1.0e-148
Identities = 29/125 (23%), Positives = 46/125 (36%)
Query: 59 MFGPGKRTVRTSNKNSVPLNLRR--STR-KRRISVNLEDYTDSSGSEDEDLM-RPSYRPL 114
M+ KR ++ +NS + ST + + LE + E E+ + RP
Sbjct: 230 MYSRVKRRRKSLRRNSYGIQNHHEVSTEGEEEVCGKLESQEEDGDIEVEEAEGEENDRPY 289
Query: 115 RNRMRNNMSQDELSPSKRKKVVEAKPTPRREGL-----RPRRSMVATRKQLNLDSGDEQG 169
R R + + + P +V A R L P R RK+ + S D
Sbjct: 290 NLRQRKTVDRYQAPP-----IVPAHQKKRENTLFDIHRSPARRSHIRRKKHAIHSSDTTS 344
Query: 170 SSEEK 174
S EE+
Sbjct: 345 SDEER 349
Score = 42 (19.8 bits), Expect = 1.7e-148, Sum P(3) = 1.7e-148
Identities = 14/51 (27%), Positives = 25/51 (49%)
Query: 143 RREGLRPRRSMVATRKQLNLDSGDEQ--GS--SEEKVGQDETENGNESDND 189
RR+ LR + +++ + G+E+ G S+E+ G E E +ND
Sbjct: 237 RRKSLRRNSYGIQNHHEVSTE-GEEEVCGKLESQEEDGDIEVEEAEGEEND 286
Score = 41 (19.5 bits), Expect = 2.2e-148, Sum P(3) = 2.2e-148
Identities = 23/93 (24%), Positives = 39/93 (41%)
Query: 39 PIRPRKSKTKARTAASQIARMFGPGKRTVRTSNKNSVPLN-LRRS-TRKRRISVNLEDYT 96
P R+ KT R A I P + R + + + RRS R+++ +++ D T
Sbjct: 288 PYNLRQRKTVDRYQAPPIV----PAHQKKRENTLFDIHRSPARRSHIRRKKHAIHSSDTT 343
Query: 97 DSSGSEDEDLMRPSYRPLRNR-MRNNMSQDELS 128
S E S RNR + N+ ++L+
Sbjct: 344 SSDEERFERRKSKSMARARNRCLPMNLRAEDLA 376
Score = 38 (18.4 bits), Expect = 1.4e-102, Sum P(3) = 1.4e-102
Identities = 6/24 (25%), Positives = 16/24 (66%)
Query: 666 LQKAMNYISDIFPPLGMSSELTKL 689
+++ +Y+ I P+ +S+ +TK+
Sbjct: 994 IEEVSDYLEVIKEPMDLSTVITKI 1017
Score = 37 (18.1 bits), Expect = 7.0e-40, Sum P(2) = 7.0e-40
Identities = 7/11 (63%), Positives = 9/11 (81%)
Query: 431 RALACAASKAG 441
RA +C A+KAG
Sbjct: 49 RAASCPAAKAG 59
>UNIPROTKB|F1NN52 [details] [associations]
symbol:F1NN52 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] InterPro:IPR001487 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004 Pfam:PF00439
PRINTS:PR00503 PROSITE:PS00674 PROSITE:PS50014 SMART:SM00297
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0017111
Gene3D:1.20.920.10 SUPFAM:SSF47370 OMA:PSVYENG
GeneTree:ENSGT00550000074694 EMBL:AADN02022496 EMBL:AADN02022497
EMBL:AADN02022498 EMBL:AADN02022499 IPI:IPI00588479
Ensembl:ENSGALT00000026409 Uniprot:F1NN52
Length = 1337
Score = 988 (352.9 bits), Expect = 5.3e-147, Sum P(2) = 5.3e-147
Identities = 237/557 (42%), Positives = 315/557 (56%)
Query: 226 QEGRRRYDLRNRAEVRRLSVEEGKQRPRSPRRVLHQGIGTKVGR---DV--RKGGSRV-- 278
++ ++RYDLR R V + + +RPR R++L + R D+ +G ++
Sbjct: 217 EDNQKRYDLRQRKTV--VPYQAPLERPRR-RKILFPSPRKRPSRLVHDILHSQGEKKLFC 273
Query: 279 LKRHRLARAXXXXXXXXXXXXXQGPAIXXXXXXXXXXXXXLFGGLEMHGTTAWGLNVAAS 338
L RL RA P+ MH + +
Sbjct: 274 LNVCRLRRAAHNANSTSSSS--PSPSSSSSSDEEESVERR-----RMHSRNRTIIEIRCL 326
Query: 339 GWGHQGDTLAALTSGIQTAGPSSKGGADIQPLQVDESVSFDDIGGLSEYIDALKEMVFFP 398
Q D L + G S AD+ P+Q+D SV FD +GGLS++I ALKEMV FP
Sbjct: 327 PVNFQEDELKGVRKDRMKIGKSL---ADVDPMQIDSSVRFDAVGGLSDHISALKEMVVFP 383
Query: 399 LLYPDFFASYHITPPRGVLLCGPPGTGKTLIARALACAASKAGQKVSFYMRKGADVLSKW 458
LLYP+ F + I PPRG L GPPGTGKTL+ARALA S+ ++V+F+MRKGAD LSKW
Sbjct: 384 LLYPEVFERFKIQPPRGCLFYGPPGTGKTLVARALANECSQGNRRVAFFMRKGADCLSKW 443
Query: 459 VGEAERQLKLLFEEAQRNQPSIIFFDEIDGLAPVRSSKQEQIHNSIVSTLLALMDGLDSR 518
VGE+ERQL+LLF++A + +PSIIFFDEIDGLAPVRSSKQ+QIH+SIVSTLLALMDGLD R
Sbjct: 444 VGESERQLRLLFDQAYQMRPSIIFFDEIDGLAPVRSSKQDQIHSSIVSTLLALMDGLDGR 503
Query: 519 GQVVLIGATNRVDAIDGALRRPGRFDREFNFPLPGCEARAEILDIHTRKWKQPPSRELKS 578
G+VV+IGATNR+D+ID ALRRPGRFDREF F LP EAR EI IHTR W
Sbjct: 504 GEVVVIGATNRLDSIDPALRRPGRFDREFLFGLPNKEARKEIFKIHTRDWTPKLLDTFID 563
Query: 579 ELAASCVGYCGADLKALCTEAAIRAFREKYPQVYTSDDKFLIDVDSVTVEKYHFIEAMST 638
ELA CVGYCGAD+K+LC EAA+ A R +YPQ+Y S +K +DV+S+ ++ F+ AM
Sbjct: 564 ELATECVGYCGADIKSLCAEAALCALRRRYPQIYLSSEKLQLDVNSIKIKAKDFVMAMQK 623
Query: 639 ITPAAHRGATVHSRPLSLVVAPCLQRHLQKAMNYISDIFPPLGMSSELTKLCMLSHGSAI 698
PA+ R R LS V+ P L L + + + +FP +EL GS+
Sbjct: 624 TVPASQRAVPSPGRALSPVMKPLLGNTLLRILQALQRVFP----HAELAMKKDQQQGSSN 679
Query: 699 PLVYRPRLLLCGSEGTGV---DHLGPAILHELEKF-PVHSLGLPALLSDPSAKTPEEALV 754
P++ + + E + + I EKF +S A P++ P LV
Sbjct: 680 PIL-KDDTIDRSDESPSIFEENVTDKVICRPQEKFLNFNSFSRKAYWQ-PTSCRPHLLLV 737
Query: 755 HI--FGEARRTTPSILY 769
+G+A P++L+
Sbjct: 738 GKTGYGQASHLAPAVLH 754
Score = 469 (170.2 bits), Expect = 5.3e-147, Sum P(2) = 5.3e-147
Identities = 105/276 (38%), Positives = 146/276 (52%)
Query: 699 PLVYRPRLLLCGSEGTG-VDHLGPAILHELEKFPVHSLGLPALLSDPSAKTPEEALVHIF 757
P RP LLL G G G HL PA+LH LE FPVH+L + L S +PEE +
Sbjct: 727 PTSCRPHLLLVGKTGYGQASHLAPAVLHALEMFPVHTLDMSVLFV--SMSSPEETCAQLI 784
Query: 758 GEARRTTPSILYIPQFNLWWENAHXXXXXXXXXXXXXXXXXXPILLLGSSSVPLAEVEGD 817
EA+RT PSI+YIP +LWW++ P+LLL +S V A++ +
Sbjct: 785 REAQRTAPSIIYIPHIHLWWDSVGATLKATFTSLIQNIPTFAPVLLLATSDVRHADLPDE 844
Query: 818 PSTVF--PLRSVYQVEKPSTEDRSLFLGRLIEAAVSVVLEGRSKKPQESVSLPELPKVPT 875
+F V+ ++ P+ ++R F LI SKK +L LP P
Sbjct: 845 VQALFNNDFGEVFNIQSPNKDERRSFFEDLI--LNQAAKPPTSKKKAAGQTLEALPVAPP 902
Query: 876 VESGPKASE-LKAKVEAEQHALRRLRMCLRDVCNRMLYDKRFSAFHYPVTDEDAPNYRSI 934
E P E +K E E+ LR LR+ LRDV +R+ DKRF AF PV E+ P+Y ++
Sbjct: 903 PEPRPLTEEEMKCLEEQEEDTLRELRIFLRDVTHRLAIDKRFRAFTKPVDPEEVPDYDTV 962
Query: 935 IQNPMDLATLLQRVDSGHYVTCSAFLQDVDLIVTNA 970
I+ PMDL+T+L ++D Y+T FL+D+DLI +NA
Sbjct: 963 IKQPMDLSTVLSKIDLHQYLTAGDFLKDIDLICSNA 998
>DICTYBASE|DDB_G0281521 [details] [associations]
symbol:DDB_G0281521 "BRAT group protein"
species:44689 "Dictyostelium discoideum" [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] InterPro:IPR001487 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004 Pfam:PF00439
PRINTS:PR00503 PROSITE:PS00674 PROSITE:PS50014 SMART:SM00297
SMART:SM00382 dictyBase:DDB_G0281521 GO:GO:0005524
EMBL:AAFI02000041 eggNOG:COG0464 GO:GO:0017111 Gene3D:1.20.920.10
SUPFAM:SSF47370 RefSeq:XP_640671.1 ProteinModelPortal:Q54TZ0
EnsemblProtists:DDB0220704 GeneID:8623056 KEGG:ddi:DDB_G0281521
InParanoid:Q54TZ0 OMA:FPEYYEL ProtClustDB:CLSZ2846786
Uniprot:Q54TZ0
Length = 1800
Score = 987 (352.5 bits), Expect = 8.4e-140, Sum P(4) = 8.4e-140
Identities = 189/326 (57%), Positives = 237/326 (72%)
Query: 356 TAGP---SSKGGADIQPLQVDESVSFDDIGGLSEYIDALKEMVFFPLLYPDFFASYHITP 412
++GP + G D +PL +D + F IGGL ++I LKEM+ PLLYP+ F + I P
Sbjct: 713 SSGPLPINLSGNKDSEPLSIDNKIGFSSIGGLDKHIQLLKEMLMLPLLYPEVFNKFKIQP 772
Query: 413 PRGVLLCGPPGTGKTLIARALACAASKAGQKVSFYMRKGADVLSKWVGEAERQLKLLFEE 472
P+GVL GPPGTGKTL+ARAL + GQKVSF+MRKGAD LSKWVGEAERQL+LLFE+
Sbjct: 773 PKGVLFYGPPGTGKTLLARALVNECNVGGQKVSFFMRKGADCLSKWVGEAERQLRLLFEQ 832
Query: 473 AQRNQPSIIFFDEIDGLAPVRSSKQEQIHNSIVSTLLALMDGLDSRGQVVLIGATNRVDA 532
A+ QPSIIFFDEIDGLAPVRSS+Q+QIHNSIVSTLLALMDGLD+RGQV++IGATNR+D+
Sbjct: 833 AKAMQPSIIFFDEIDGLAPVRSSRQDQIHNSIVSTLLALMDGLDNRGQVIVIGATNRIDS 892
Query: 533 IDGALRRPGRFDREFNFPLPGCEARAEILDIHTRKWKQPPSRELKSELAASCVGYCGADL 592
ID ALRRPGRFDRE F LP EAR IL IHT W PS +L E++ GYCGAD+
Sbjct: 893 IDPALRRPGRFDRELLFTLPSKEARHRILTIHTENWLPKPSSQLLLEISDQLAGYCGADI 952
Query: 593 KALCTEAAIRAFREKYPQVYTSDDKFLIDVDSVTVEKYHFIEAMSTITPAAHRGATVHSR 652
K+LC+E+ + + R YPQ+Y + +K + VD++ VEK HF +AM ITP++ R S
Sbjct: 953 KSLCSESVLCSLRTTYPQIYKTSNKLQLSVDNILVEKSHFQDAMKLITPSSKRNLISFSN 1012
Query: 653 PLSLVVAPCLQRHLQKAMNYISDIFP 678
PLS ++ P L+ HL + + IFP
Sbjct: 1013 PLSSILKPLLEPHLNLLLKKVDSIFP 1038
Score = 374 (136.7 bits), Expect = 8.4e-140, Sum P(4) = 8.4e-140
Identities = 83/274 (30%), Positives = 147/274 (53%)
Query: 701 VYRPRLLLCGSEGTGVDHLGPAILHELEKFPVHSLGLPALLSDPSAKTPEEALVHIFGEA 760
VYRPRLL+ G +G G L ++L+ LE+FP+ S+ + AL+SDP++KT EE+ + I EA
Sbjct: 1099 VYRPRLLIHGEQGMGQIQLANSLLYHLEEFPIFSIDISALISDPTSKTVEESCIRILSEA 1158
Query: 761 RRTTPSILYIPQFNLWWENAHXXXXXXXXXXXXXXXXXXPILLLGSSSVPLAEVEGDPST 820
++ +PSI+YIP + W N I L+ + A + S
Sbjct: 1159 KKASPSIIYIPNIDCWVSNQFGNLSEILIYFLKTIDSNQSIYLISTMEDSSASTINNSSP 1218
Query: 821 VFP--LRSVYQVEKPSTEDRSLFLGRLIEAAVSVVLEGRSKKPQESVSLPELPKVPTVES 878
+ S +++ K + F ++ V G + K +V + E ++P V
Sbjct: 1219 IIDELFSSKFEISKLTKRSIKDFYENIVNDIKEV---GITIKKALTVKIQESQQLPIV-- 1273
Query: 879 GPKASELKAKVEAEQHALRRLRMCLRDVCNRMLYDKRFSAFHYPVTDEDAPNYRSIIQNP 938
P S+ +++ ++ +R+LR+ LR++ +++++DK++ +F V E P Y +I+NP
Sbjct: 1274 -PFQSDSVRELKKDRQLVRQLRILLREMVSKIIFDKKYLSFFRDVNAEQFPEYYELIKNP 1332
Query: 939 MDLATLLQRVDSGHYVTCSAFLQDVDLIVTNAKV 972
M L + Q +DS Y++ +FL+D+DLIVTN ++
Sbjct: 1333 MSLQRISQNLDSYEYISLESFLKDIDLIVTNTEL 1366
Score = 62 (26.9 bits), Expect = 2.0e-138, Sum P(3) = 2.0e-138
Identities = 21/121 (17%), Positives = 50/121 (41%)
Query: 81 RSTRKRRISVNLEDYTDSSGSEDEDLMRPSYRPLRNRMRNNMSQDELSPSKRKKVVEAKP 140
R +K+ + N + + ED+++ + + + + Q + S+R+K + +
Sbjct: 280 RQRKKQNTNNNRNNNNNDDEGEDDNISYKIQQQQQQQQQQQQQQQQQQTSQRQKQYQQQE 339
Query: 141 TPRREGLRPRRSMVATRKQLNLDSG-DEQGSS---EEKVGQDETENGNESDNDADD-GQN 195
E + + +Q ++ E G EE V ++E E E + + ++ G+
Sbjct: 340 DEEEEEVETEQDDDDEEEQQEEENAYSEYGEEDVDEEMVEEEEEEEQEEGEEEEEEEGEE 399
Query: 196 E 196
E
Sbjct: 400 E 400
Score = 59 (25.8 bits), Expect = 8.4e-140, Sum P(4) = 8.4e-140
Identities = 16/74 (21%), Positives = 39/74 (52%)
Query: 124 QDELSPSKRKKVVEAKPTPRREGLRPRR-SMVATRKQLNLDSGDEQGSSEEKVGQDETEN 182
Q ++ + +K + + P+R+ + P+ S AT + D + ++ ++ Q+ N
Sbjct: 232 QQQMKLEEEQKKFQPQ-RPQRQRVPPKSFSFEATLNGYDDDIDEIHSNNRQRKKQNTNNN 290
Query: 183 GNESDNDADDGQNE 196
N ++ND D+G+++
Sbjct: 291 RNNNNND-DEGEDD 303
Score = 53 (23.7 bits), Expect = 1.8e-137, Sum P(3) = 1.8e-137
Identities = 21/125 (16%), Positives = 44/125 (35%)
Query: 76 PLNLRRSTRKRRISVNLEDYTDSSGS-EDEDLMRPSYRPLRNRMRNNMSQDELSPSKRKK 134
P R + L Y D + R NR NN + + K
Sbjct: 249 PQRQRVPPKSFSFEATLNGYDDDIDEIHSNNRQRKKQNTNNNRNNNNNDDEGEDDNISYK 308
Query: 135 VVEAKPTPRREGLRPRRSMVATR-KQLNLDSGDEQGSSEEKVGQDETENGNESDNDADD- 192
+ + + +++ + ++ + R KQ +E+ E + D+ E E +N +
Sbjct: 309 IQQQQQQQQQQQQQQQQQQTSQRQKQYQQQEDEEEEEVETEQDDDDEEEQQEEENAYSEY 368
Query: 193 GQNEI 197
G+ ++
Sbjct: 369 GEEDV 373
Score = 47 (21.6 bits), Expect = 1.5e-138, Sum P(4) = 1.5e-138
Identities = 16/51 (31%), Positives = 26/51 (50%)
Query: 152 SMVATRKQLNLDSGDE------QGSSEEKVGQDETENG-NESDNDADDGQN 195
S V R++ N+DSG +G+S + VG N NE++N +D +
Sbjct: 86 SFVNRRRKHNVDSGGSTDNSGTEGNSGDIVGSGGNNNLINENNNKNNDNNS 136
Score = 46 (21.3 bits), Expect = 7.5e-29, Sum P(3) = 7.5e-29
Identities = 8/42 (19%), Positives = 19/42 (45%)
Query: 154 VATRKQLNLDSGDEQGSSEEKVGQDETENGNESDNDADDGQN 195
++ K N+ + + + Q+ EN N ++N ++ N
Sbjct: 1039 ISQLKNQNIQNNQNNNNENNQNNQNNNENNNNNNNSNENINN 1080
Score = 44 (20.5 bits), Expect = 1.6e-136, Sum P(3) = 1.6e-136
Identities = 23/98 (23%), Positives = 35/98 (35%)
Query: 38 NPIRPRKSKTKARTAASQIARMFGPGKRTVRTSNKNSVPLNL-RRSTRKRRISVNLEDYT 96
NP + + + + A S + P + VR P + RS R IS L+ T
Sbjct: 614 NPHQQHQQHQQQQPAQSSSSSSSHPPSKRVRIPTNRYDPSKVYERSNSNRSISRPLQPTT 673
Query: 97 DSSGSEDEDLMRPSYRPLRNRMRNN--MSQDELSPSKR 132
S + + + NN +S DE KR
Sbjct: 674 SSFSNRSGWRYNNNNNGGQQFENNNDDLSDDEFGVGKR 711
Score = 41 (19.5 bits), Expect = 6.5e-138, Sum P(4) = 6.5e-138
Identities = 9/33 (27%), Positives = 19/33 (57%)
Query: 153 MVATRKQLNLDSGDEQGSSEEKVGQDETENGNE 185
MV ++ + G+E+ EE+ G++E +N +
Sbjct: 377 MVEEEEEEEQEEGEEE---EEEEGEEEQQNNRK 406
Score = 38 (18.4 bits), Expect = 8.4e-140, Sum P(4) = 8.4e-140
Identities = 8/19 (42%), Positives = 14/19 (73%)
Query: 84 RKRRISVNLEDYTDSSGSE 102
R+R+ +V+ TD+SG+E
Sbjct: 90 RRRKHNVDSGGSTDNSGTE 108
Score = 38 (18.4 bits), Expect = 1.5e-138, Sum P(4) = 1.5e-138
Identities = 8/32 (25%), Positives = 18/32 (56%)
Query: 226 QEGRRRYDLRNRAEVRRLSVEEGKQRPRSPRR 257
Q + + +R + + +L E+ K +P+ P+R
Sbjct: 220 QNKQHQKHIRYQQQQMKLEEEQKKFQPQRPQR 251
Score = 37 (18.1 bits), Expect = 1.7e-137, Sum P(4) = 1.7e-137
Identities = 6/29 (20%), Positives = 14/29 (48%)
Query: 161 NLDSGDEQGSSEEKVGQDETENGNESDND 189
+LDS + ++ + N N ++N+
Sbjct: 23 DLDSNNNNNNNNNNNNNNNNNNNNNNNNN 51
>SGD|S000003502 [details] [associations]
symbol:YTA7 "Protein that localizes to chromatin and
regulates histone expression" species:4932 "Saccharomyces
cerevisiae" [GO:0042393 "histone binding" evidence=IDA;IMP]
[GO:0005634 "nucleus" evidence=IDA] [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0031936 "negative regulation of chromatin silencing"
evidence=IMP] [GO:0003682 "chromatin binding" evidence=IMP;IDA]
[GO:0042406 "extrinsic to endoplasmic reticulum membrane"
evidence=IDA] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IMP] [GO:0000122
"negative regulation of transcription from RNA polymerase II
promoter" evidence=IMP] InterPro:IPR001487 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004 Pfam:PF00439
PROSITE:PS00674 PROSITE:PS50014 SMART:SM00382 SGD:S000003502
GO:GO:0005524 GO:GO:0005634 EMBL:BK006941 GO:GO:0045944
GO:GO:0003682 GO:GO:0000122 GO:GO:0031936 eggNOG:COG0464
GO:GO:0017111 GO:GO:0042393 GO:GO:0042406 Gene3D:1.20.920.10
SUPFAM:SSF47370 PROSITE:PS00633 EMBL:Y07893 EMBL:X81072
GeneTree:ENSGT00550000074694 EMBL:Z73055 PIR:S64603
RefSeq:NP_011786.1 ProteinModelPortal:P40340 SMR:P40340
DIP:DIP-6557N IntAct:P40340 MINT:MINT-629064 STRING:P40340
PaxDb:P40340 EnsemblFungi:YGR270W GeneID:853186 KEGG:sce:YGR270W
CYGD:YGR270w HOGENOM:HOG000157282 OMA:YPELYQN OrthoDB:EOG473T0K
NextBio:973329 Genevestigator:P40340 GermOnline:YGR270W
Uniprot:P40340
Length = 1379
Score = 967 (345.5 bits), Expect = 5.6e-128, Sum P(4) = 5.6e-128
Identities = 188/307 (61%), Positives = 233/307 (75%)
Query: 365 ADIQPLQVDESVSFDDIGGLSEYIDALKEMVFFPLLYPDFFASYHITPPRGVLLCGPPGT 424
AD+ PL VD +V+FDDIGGL YID LKEMV PLLYP+ + +++ITPPRGVL GPPGT
Sbjct: 399 ADLDPLGVDMNVNFDDIGGLDNYIDQLKEMVALPLLYPELYQNFNITPPRGVLFHGPPGT 458
Query: 425 GKTLIARALACAASKAGQKVSFYMRKGADVLSKWVGEAERQLKLLFEEAQRNQPSIIFFD 484
GKTL+ARALA + S +K++F+MRKGAD+LSKWVGEAERQL+LLFEEA+++QPSIIFFD
Sbjct: 459 GKTLMARALAASCSSDERKITFFMRKGADILSKWVGEAERQLRLLFEEAKKHQPSIIFFD 518
Query: 485 EIDGLAPVRSSKQEQIHNSIVSTLLALMDGLDSRGQVVLIGATNRVDAIDGALRRPGRFD 544
EIDGLAPVRSSKQEQIH SIVSTLLALMDG+D+RGQV++IGATNR DA+D ALRRPGRFD
Sbjct: 519 EIDGLAPVRSSKQEQIHASIVSTLLALMDGMDNRGQVIVIGATNRPDAVDPALRRPGRFD 578
Query: 545 REFNFPLPGCEARAEILDIHTRKWKQPPSRELKSELAASCVGYCGADLKALCTEAAIRAF 604
REF FPLP +AR +IL I TRKW P S +LA GY GADL++LCTEAA+ +
Sbjct: 579 REFYFPLPDVKARFKILQIQTRKWSSPLSTNFIDKLAFLTKGYGGADLRSLCTEAALISI 638
Query: 605 REKYPQVYTSDDKFLIDVDSVTVEKYHFIEAMSTITPAAHRGATVHSRPLSLVVAPCLQR 664
+ +PQ+Y S+DK L+D + V+ F+ A+ I P++ R +PL ++ P L
Sbjct: 639 QRSFPQIYRSNDKLLVDPSKIKVKVSDFMLALKKIVPSSARSTGSSPQPLPELIKPLLAD 698
Query: 665 HLQKAMN 671
L N
Sbjct: 699 QLNNLKN 705
Score = 236 (88.1 bits), Expect = 5.6e-128, Sum P(4) = 5.6e-128
Identities = 73/240 (30%), Positives = 125/240 (52%)
Query: 701 VYRPRLLLCGSEGTGVDHLGPAILHELEKFPVHSLGLPALLSDPSAKTPEEALVHIFGEA 760
+ +PRLL+ G +G G ++G AIL+ LE+F V +L L +L+S+ S++T E A+V F EA
Sbjct: 767 ICKPRLLINGPKGNGQQYVGAAILNYLEEFNVQNLDLASLVSE-SSRTIEAAVVQSFMEA 825
Query: 761 RRTTPSILYIPQFNLWWENAHXXXXXXXXXXXXXXXXXXPILLLG-SSSVPLAEVEGDPS 819
++ PS+++IP ++W ILLL + ++ ++EV+
Sbjct: 826 KKRQPSVVFIPNLDIWINTIPENVILVLSGLFRSLQSNEKILLLCLAENLDISEVKNGIL 885
Query: 820 TVFPL-RSVYQVEKPSTEDRSLFLGRLIEAAVSVVLEGRSKKPQESVSLPELPKV----- 873
+ F ++++Q+ KPS E+ + + LIE + + KK + LPEL KV
Sbjct: 886 SDFAFDKNIFQLHKPSKENITRYFSNLIELLKTKPSDIPMKKRRVK-PLPELQKVTSNAA 944
Query: 874 PTV--ESGPKASE---LKAKVEAEQHALRRLRMCLRDVCNRM--LYDKRFSAFHYPVTDE 926
PT E+G SE L+ K+++ QH RL+ L+ + + L+ R+ F P D+
Sbjct: 945 PTNFDENGEPLSEKVVLRRKLKSFQHQDMRLKNVLKIKLSGLMDLFKNRYKRFRKPPIDD 1004
Score = 56 (24.8 bits), Expect = 5.6e-128, Sum P(4) = 5.6e-128
Identities = 12/32 (37%), Positives = 21/32 (65%)
Query: 939 MDLATLLQRVDSGHYVTCSAFLQDVDLIVTNA 970
MDL + +R+ +G+Y FL+D++LI +A
Sbjct: 1044 MDLDIVEERLWNGYYSEPKQFLKDIELIYRDA 1075
Score = 56 (24.8 bits), Expect = 1.1e-16, Sum P(3) = 1.1e-16
Identities = 14/36 (38%), Positives = 21/36 (58%)
Query: 71 NKNSVPLNLRRSTRKRRISV--NLEDYTDSSGSEDE 104
NK LN++ +T +R S+ N DY + SG E+E
Sbjct: 705 NKLDYMLNIKDTTFQRNTSLLQNFIDYEEYSGEEEE 740
Score = 55 (24.4 bits), Expect = 5.6e-128, Sum P(4) = 5.6e-128
Identities = 25/96 (26%), Positives = 39/96 (40%)
Query: 71 NKNSVPLNLRRSTRKRRISVNLEDYTDSSGSEDEDLMRPSYRPLRNRMRNNMSQDELSPS 130
+++S N RR R+ V D + +DE+ R S+ R++ S+ S S
Sbjct: 149 DEDSKDNNRRRRAADRKFVVPDPDDDEEYDEDDEEGDRISHSASSKRLKRANSRRTRS-S 207
Query: 131 KRKKVVEAKPTPRREGLRPRRSMVATRKQLNLDSGD 166
+ + P P R LR R T + N D D
Sbjct: 208 RHPET----PPPVRRALRSRTRHSRTSNEENDDEND 239
Score = 52 (23.4 bits), Expect = 1.2e-127, Sum P(4) = 1.2e-127
Identities = 25/102 (24%), Positives = 44/102 (43%)
Query: 49 ARTAASQIARMFGPGKRTVRTSNKNSVPLNLRRSTRKRRISVNLEDYTDSSGSEDE-DLM 107
+ +A+S+ R+ R R+S P +RR+ R R T + ++DE D
Sbjct: 188 SHSASSK--RLKRANSRRTRSSRHPETPPPVRRALRSR----TRHSRTSNEENDDENDNS 241
Query: 108 RPSYRPLRNRMRNNMSQDELSPSKRKKVVEAKPTPRREGLRP 149
R L + +R + +D SP + K+ + + P L P
Sbjct: 242 RNEALTLADEIRE-LQED--SPIREKRFLRERTKPVNYKLPP 280
Score = 42 (19.8 bits), Expect = 1.3e-126, Sum P(4) = 1.3e-126
Identities = 8/18 (44%), Positives = 10/18 (55%)
Query: 175 VGQDETENGNESDNDADD 192
V DE N N+ +D DD
Sbjct: 71 VTSDEHHNNNQKGDDEDD 88
Score = 39 (18.8 bits), Expect = 4.9e-16, Sum P(4) = 4.9e-16
Identities = 9/32 (28%), Positives = 16/32 (50%)
Query: 606 EKYPQVYTSDDKFLIDVDSVTVEKYHFIEAMS 637
E+Y DK+ + D+ + Y F E+M+
Sbjct: 732 EEYSGEEEEHDKYGGNEDTSSFRSYEFFESMA 763
>POMBASE|SPAC31G5.19 [details] [associations]
symbol:abo1 "ATPase with bromodomain protein
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0000790
"nuclear chromatin" evidence=ISM] [GO:0005524 "ATP binding"
evidence=ISM] [GO:0005634 "nucleus" evidence=IDA] [GO:0006338
"chromatin remodeling" evidence=ISM] [GO:0006357 "regulation of
transcription from RNA polymerase II promoter" evidence=ISO]
[GO:0016887 "ATPase activity" evidence=ISM] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 PomBase:SPAC31G5.19 GO:GO:0005524 EMBL:CU329670
GO:GO:0006357 GO:GO:0016887 GO:GO:0006338 GO:GO:0000790 HSSP:Q01853
eggNOG:COG0464 HOGENOM:HOG000157282 OrthoDB:EOG473T0K PIR:T38636
RefSeq:NP_594020.1 ProteinModelPortal:O14114 STRING:O14114
EnsemblFungi:SPAC31G5.19.1 GeneID:2543084 KEGG:spo:SPAC31G5.19
OMA:ITRIMAN NextBio:20804112 Uniprot:O14114
Length = 1190
Score = 1177 (419.4 bits), Expect = 1.5e-126, Sum P(3) = 1.5e-126
Identities = 271/603 (44%), Positives = 355/603 (58%)
Query: 346 TLAALTSGIQTAGPSSKGG-------ADIQPLQVDESVSFDDIGGLSEYIDALKEMVFFP 398
T+ ALT + GP G AD PL VD S+SF+ +GGL YI+ LKEMV P
Sbjct: 226 TIKALTDPANSGGPPDFGRIREKSDLADSDPLGVDSSLSFESVGGLDNYINQLKEMVMLP 285
Query: 399 LLYPDFFASYHITPPRGVLLCGPPGTGKTLIARALACAASKAGQKVSFYMRKGADVLSKW 458
LLYP+ F +++ PPRGVL GPPGTGKTL+ARALA A S +KVSFYMRKGAD LSKW
Sbjct: 286 LLYPEIFQRFNMQPPRGVLFHGPPGTGKTLMARALAAACSSENKKVSFYMRKGADCLSKW 345
Query: 459 VGEAERQLKLLFEEAQRNQPSIIFFDEIDGLAPVRSSKQEQIHNSIVSTLLALMDGLDSR 518
VGEAERQL+LLFEEA+ QPSIIFFDEIDGLAPVRSSKQEQIH SIVSTLLALMDG++SR
Sbjct: 346 VGEAERQLRLLFEEAKSTQPSIIFFDEIDGLAPVRSSKQEQIHASIVSTLLALMDGMESR 405
Query: 519 GQVVLIGATNRVDAIDGALRRPGRFDREFNFPLPGCEARAEILDIHTRKWKQPPSRELKS 578
GQV++IGATNR DA+D ALRRPGRFDREF FPLP +AR +I++IHTR W P L S
Sbjct: 406 GQVIIIGATNRPDAVDPALRRPGRFDREFYFPLPDRDARKKIIEIHTRNWDPPVPEWLCS 465
Query: 579 ELAASCVGYCGADLKALCTEAAIRAFREKYPQVYTSDDKFLIDVDSVTVEKYHFIEAMST 638
LA GY GADL+ALCTEAA+ + + YPQ+Y S + ID ++ V+ F+ +M
Sbjct: 466 MLAEKSKGYGGADLRALCTEAALNSIKRTYPQLYRSTKRLQIDPKTIKVKVKDFVMSMKR 525
Query: 639 ITPAAHRGATVHSRPLSLVVAPCL-------QRHLQKAMNYISDIFPPLGMSSELTKLCM 691
+ P++ R + S+PLS + P L ++ LQK M S + P + + K
Sbjct: 526 MIPSSERSSISPSKPLSPELKPLLNEAFQDIEKTLQKLMPVASKLNPLEEVMYDDPKEND 585
Query: 692 LSHGSAIPL-----VYRPRLLLCGSEGTGVDHLGPAILHELEKFPVHSLGLPALLSDPSA 746
+ + +Y+PR L+CG +G G LGPAIL + E V S + LL D S
Sbjct: 586 FEYQQRLETFETLRIYKPRFLICGRKGLGQTALGPAILQQYEGVHVQSFDMSTLLQD-ST 644
Query: 747 KTPEEALVHIFGEARRTTPSILYIPQFNLWWENAHXXXXXXXXXXXXXXXXXXPILLLGS 806
++ E +++H+F E RR TPSI+YIP + W IL L
Sbjct: 645 QSIETSIIHLFLEVRRHTPSIIYIPDIDNWLNVLPLTAITTFSSMLERLDFSDQILFLAL 704
Query: 807 SSVPLAEVEGDPSTVFPLR-SVYQVEKPSTEDRSLFLGRLIEAAVSVVLEGRSKKPQESV 865
SS PL+E+ F + SVY ++ P+ + F ++E + E P++
Sbjct: 705 SSSPLSELHPQLREWFSSKQSVYSLQYPTRDSIIAFFQPILELIKASPTELPGGIPRKRR 764
Query: 866 SLPELPKVPTVESGPKASE---LKAKVEAEQHALRRLRMCLRDVCNRMLYDKRFSAFHYP 922
LPELP P + P S+ LK +A+ L +L++ L + + R+ F P
Sbjct: 765 VLPELPLAP--DPPPFTSQKITLKQTKQADMRLLNKLKIKLNALLGSLR--ARYRKFKKP 820
Query: 923 VTD 925
+ D
Sbjct: 821 LID 823
Score = 58 (25.5 bits), Expect = 1.5e-126, Sum P(3) = 1.5e-126
Identities = 33/133 (24%), Positives = 42/133 (31%)
Query: 126 ELSPSKRKKVVEAKPTPRREGLRPRRSMVATRK---QLNLDSGDEQGSSEE---KVGQDE 179
ELSP RR R +SM+A ++ D GDE EE K +
Sbjct: 17 ELSPVSDSSDEMPNNAKRR---RRSQSMIANKRIHQAFQEDEGDEDWEEEEHKPKAKRRY 73
Query: 180 TENGNESDNDADDGQNEIXXXXXXXXXXXXXXXXXXXXXXXXXXXXQEGRRRYDLRNRAE 239
NES ++ DD E+ RR LRNR
Sbjct: 74 NTRSNESFSEGDDEPFEVSESSALEDELSDSEDSFIRSVRSKPKYKPGTRRSTRLRNRRS 133
Query: 240 VRRLSVEEGKQRP 252
EE + RP
Sbjct: 134 QDEEESEE-EHRP 145
Score = 55 (24.4 bits), Expect = 3.1e-126, Sum P(3) = 3.1e-126
Identities = 29/95 (30%), Positives = 37/95 (38%)
Query: 14 PGPVRTSDRLR-RRPKILGRTYLYYNPI-RPRKSKTKART--AASQIARMFGPGKRTVRT 69
PG R S RLR RR + + + PI R R S+ A + M G V
Sbjct: 120 PG-TRRSTRLRNRRSQDEEESEEEHRPILRERTSRINYSVPLAFPPVDEMDGDPSSQVNQ 178
Query: 70 SNKNSVPLNLRRSTRKRRISVNLEDYTDSSGSEDE 104
S L + R+ + Y DSSGSE E
Sbjct: 179 SRSRKTHSELAITKLLRQQVSSFMPYIDSSGSESE 213
Score = 54 (24.1 bits), Expect = 4.0e-126, Sum P(3) = 4.0e-126
Identities = 20/59 (33%), Positives = 29/59 (49%)
Query: 92 LEDYTDSSGSEDEDLM----RPSYRP-LRN--RMRNNMSQDELSPSKRKKVVEAKPTPR 143
LED + S SED + +P Y+P R R+RN SQDE + + + + T R
Sbjct: 97 LED--ELSDSEDSFIRSVRSKPKYKPGTRRSTRLRNRRSQDEEESEEEHRPILRERTSR 153
Score = 52 (23.4 bits), Expect = 6.5e-126, Sum P(3) = 6.5e-126
Identities = 23/121 (19%), Positives = 46/121 (38%)
Query: 69 TSNKNSVPLNLRRSTRKRRISVNLEDYTDSSGSE-DEDLMRPSYRPLRNRMRNNMSQDEL 127
+ + + +P N +R R + + N + E DED ++P R N S +
Sbjct: 22 SDSSDEMPNNAKRRRRSQSMIANKRIHQAFQEDEGDEDWEEEEHKPKAKRRYNTRSNESF 81
Query: 128 SPSKRKKVVEAKPTPRREGLRPRR-SMV-ATRKQLNLDSGDEQGSS-EEKVGQDETENGN 184
S + ++ + + L S + + R + G + + + QDE E+
Sbjct: 82 SEGDDEPFEVSESSALEDELSDSEDSFIRSVRSKPKYKPGTRRSTRLRNRRSQDEEESEE 141
Query: 185 E 185
E
Sbjct: 142 E 142
Score = 43 (20.2 bits), Expect = 1.5e-126, Sum P(3) = 1.5e-126
Identities = 14/52 (26%), Positives = 23/52 (44%)
Query: 920 HYPVTDEDAPNYRSIIQ-NPMDLATLLQRVDSGHYVTCSAFLQDVDLIVTNA 970
HY D+ S + + M L + +R Y T F+ D+ LI+ +A
Sbjct: 845 HYEFVDDVVKQIGSDQKFSMMSLEEIEKRTWDNCYCTPKQFVHDIKLILRDA 896
>RGD|1304849 [details] [associations]
symbol:Atad2 "ATPase family, AAA domain containing 2"
species:10116 "Rattus norvegicus" [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=ISO] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005730
"nucleolus" evidence=ISO] InterPro:IPR001487 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004 Pfam:PF00439
PRINTS:PR00503 PROSITE:PS00674 PROSITE:PS50014 SMART:SM00297
SMART:SM00382 RGD:1304849 GO:GO:0005524 GO:GO:0005634 GO:GO:0017111
Gene3D:1.20.920.10 SUPFAM:SSF47370 OrthoDB:EOG441Q9S
GeneTree:ENSGT00550000074694 IPI:IPI00557599
Ensembl:ENSRNOT00000008508 UCSC:RGD:1304849 ArrayExpress:D3ZJD2
Uniprot:D3ZJD2
Length = 1373
Score = 794 (284.6 bits), Expect = 2.1e-125, Sum P(3) = 2.1e-125
Identities = 159/315 (50%), Positives = 214/315 (67%)
Query: 365 ADIQPLQVDESVSFDDIGGLSEYIDALKE-MVFFPLLYPDFFASYHITPPRGVLLCGPPG 423
AD+ P+Q+D SVS + LS I AL+E + P+++ + + I PPRG L GPPG
Sbjct: 397 ADVDPMQLDSSVSVFSVT-LSYSICALREDLSLIPIIHMMTYIKFKIQPPRGCLFYGPPG 455
Query: 424 TGKTLIARALACAASKAGQKVSFYMRKGADVLSKWVGEAERQLKLLFEEAQRNQPSIIFF 483
TGKTL+ARALA S+ ++V+F+MRKGAD LSKWVGE+E QL+LLF++ + + S +F
Sbjct: 456 TGKTLVARALANECSRGDKRVAFFMRKGADCLSKWVGESESQLRLLFDQIYQKRASDLFT 515
Query: 484 DEIDGLAPVRSSKQEQIHNSIVSTLLALMDGLDSRGQVVLIGATNRVDAIDGALRRPGRF 543
D L V SS++++ +SIVSTLLALMDGLDSRG++V+IGATNR+D+ID ALRRPGRF
Sbjct: 516 DGRKALGSVPSSRKKKKFSSIVSTLLALMDGLDSRGEIVVIGATNRLDSIDPALRRPGRF 575
Query: 544 DREFNFPLPGCEARAEILDIHTRKWKQPPSRELKSELAASCVGYCGADLKALCTEAAIRA 603
DREF F LP +AR EIL IHTR W P ELA +CVGYCGAD+K++C EAA+ A
Sbjct: 576 DREFLFSLPDKDARKEILKIHTRDWNPKPVDMFLEELAENCVGYCGADIKSICAEAALCA 635
Query: 604 FREKYPQVYTSDDKFLIDVDSVTVEKYHFIEAMSTITPAAHRGATVHSRPLSLVVAPCLQ 663
R +YPQ+YT+ +K +D+ S+ + F AM I PA+ R T + LS +V P LQ
Sbjct: 636 LRRRYPQIYTTSEKLQLDLSSINISAKDFETAMQKIIPASQRAVTSPGQALSAIVKPLLQ 695
Query: 664 RHLQKAMNYISDIFP 678
+ + + +FP
Sbjct: 696 NTVHMILEALQKVFP 710
Score = 444 (161.4 bits), Expect = 2.1e-125, Sum P(3) = 2.1e-125
Identities = 102/278 (36%), Positives = 153/278 (55%)
Query: 699 PLVYRPRLLLCGSEGTGVD-HLGPAILHELEKFPVHSLGLPALLSDPSAKTPEEALVHIF 757
P+ +RPRLL+ G G G HL PA++H LEKF V++L +P LL S +PEEA +
Sbjct: 773 PMSFRPRLLIVGEPGFGQSSHLAPAVIHALEKFTVYTLDIPVLLGI-STTSPEEACSKMI 831
Query: 758 GEARRTTPSILYIPQFNLWWENAHXXXXXXXXXXXXXXXXXXPILLLGSSSVPLAEVEGD 817
EA+RT PSI+Y+P +LWWE P+LLL +S P + + +
Sbjct: 832 REAKRTAPSIVYVPHVHLWWEIVGPTLRATFTTLLQNIPSFAPVLLLATSERPYSALPEE 891
Query: 818 PSTVFP--LRSVYQVEKPSTEDRSLFLGRLI--EAAVSVVLEGRSKKPQESVSLPELPKV 873
+F ++ V+ P E+R+ F LI +AA V S+K +L LP
Sbjct: 892 VQELFTHDYGEIFNVQLPDKEERTKFFEDLILKQAAKPPV----SQKKAVLQALEVLPVA 947
Query: 874 PTVESGP-KASELKAKVEAEQHALRRLRMCLRDVCNRMLYDKRFSAFHYPVTDEDAPNYR 932
P E P A E+K E E+ R LR+ LR+V +R+ DKRF F PV ++ P+Y
Sbjct: 948 PPPEPRPLTAEEVKRLEEQEEDTFRELRIFLRNVTHRLAIDKRFRVFTKPVDPDEVPDYV 1007
Query: 933 SIIQNPMDLATLLQRVDSGHYVTCSAFLQDVDLIVTNA 970
++I+ PMDL++++ ++D Y+T +L+D+DLI +NA
Sbjct: 1008 TVIKQPMDLSSVISKIDLHKYLTVKDYLKDIDLICSNA 1045
Score = 56 (24.8 bits), Expect = 2.1e-125, Sum P(3) = 2.1e-125
Identities = 24/100 (24%), Positives = 40/100 (40%)
Query: 33 TYLYYNPIRPRKSKTKARTAASQIARMFGPGKRTVRTSNKNSVPLNLRRSTRKRRISVNL 92
T Y P+ + + K S A P + R S+ +R R+R +++
Sbjct: 287 TVYYQAPLEKPRHQRKPNMFYSGPA---SPARPRYRLSSSGPRSPYCKRMNRRRH-AIHS 342
Query: 93 EDYTDSSGSEDEDLMRPSYRPLRNRMRN-----NMSQDEL 127
D T SS S +++ + RNR N N +DE+
Sbjct: 343 SDSTSSSSSSEDECFERRRKRNRNRAINRCLPLNFRKDEI 382
Score = 54 (24.1 bits), Expect = 3.4e-125, Sum P(3) = 3.4e-125
Identities = 10/52 (19%), Positives = 27/52 (51%)
Query: 143 RREGLRPRRSMVATRKQLNLDSGDEQGSSEEKVGQDETENGNESDNDADDGQ 194
+R+ ++ + +++S +E E+ G+DE ++ +E ++ +D Q
Sbjct: 225 KRKAIQQADEETTDNQDGSVESSEEGEEQEDDDGEDEEDDEDEEEDGEEDNQ 276
Score = 51 (23.0 bits), Expect = 7.0e-125, Sum P(3) = 7.0e-125
Identities = 11/45 (24%), Positives = 23/45 (51%)
Query: 152 SMVATRKQLNLDSGDEQGSSEEKVGQDETENGNESDNDADDGQNE 196
+M K+ + DE+ + + + +E G E ++D DG++E
Sbjct: 219 TMYTRGKRKAIQQADEETTDNQDGSVESSEEGEEQEDD--DGEDE 261
Score = 51 (23.0 bits), Expect = 7.0e-125, Sum P(3) = 7.0e-125
Identities = 10/48 (20%), Positives = 24/48 (50%)
Query: 148 RPRRSMVATRKQLNLDSGDEQGSSEEKVGQDETENGNESDNDADDGQN 195
R +R + + D+ D S E+ + E ++G + ++D D+ ++
Sbjct: 223 RGKRKAIQQADEETTDNQDGSVESSEEGEEQEDDDGEDEEDDEDEEED 270
Score = 45 (20.9 bits), Expect = 3.0e-124, Sum P(3) = 3.0e-124
Identities = 9/39 (23%), Positives = 20/39 (51%)
Query: 158 KQLNLDSGDEQGSSEEKVGQDETENGNESDNDADDGQNE 196
+Q + ++ D Q S E + E + ++ +++ DD E
Sbjct: 230 QQADEETTDNQDGSVESSEEGEEQEDDDGEDEEDDEDEE 268
Score = 43 (20.2 bits), Expect = 3.1e-83, Sum P(3) = 3.1e-83
Identities = 30/112 (26%), Positives = 46/112 (41%)
Query: 658 VAPCLQRHLQKAMNYISDIFPPLGMSSE-----LTKLCMLSHGSAIPLVYRPRLLLCGS- 711
+AP + L+K Y DI LG+S+ +K+ + +A +VY P + L
Sbjct: 794 LAPAVIHALEKFTVYTLDIPVLLGISTTSPEEACSKMIREAKRTAPSIVYVPHVHLWWEI 853
Query: 712 EGTGVDHLGPAILHELEKF-PVHSLGLPALLSDPSAKTPEEA---LVHIFGE 759
G + +L + F PV L A P + PEE H +GE
Sbjct: 854 VGPTLRATFTTLLQNIPSFAPVLLL---ATSERPYSALPEEVQELFTHDYGE 902
>CGD|CAL0002985 [details] [associations]
symbol:orf19.3949 species:5476 "Candida albicans" [GO:0042406
"extrinsic to endoplasmic reticulum membrane" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0031936
"negative regulation of chromatin silencing" evidence=IEA]
[GO:0042393 "histone binding" evidence=IEA] [GO:0003682 "chromatin
binding" evidence=IEA] InterPro:IPR001487 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004 Pfam:PF00439
PROSITE:PS00674 PROSITE:PS50014 SMART:SM00382 CGD:CAL0002985
GO:GO:0005524 eggNOG:COG0464 GO:GO:0017111 Gene3D:1.20.920.10
SUPFAM:SSF47370 EMBL:AACQ01000012 EMBL:AACQ01000011
RefSeq:XP_721858.1 RefSeq:XP_722018.1 ProteinModelPortal:Q5AK72
STRING:Q5AK72 GeneID:3636302 GeneID:3636397 KEGG:cal:CaO19.11431
KEGG:cal:CaO19.3949 Uniprot:Q5AK72
Length = 1314
Score = 942 (336.7 bits), Expect = 1.1e-123, Sum P(4) = 1.1e-123
Identities = 192/332 (57%), Positives = 241/332 (72%)
Query: 350 LTSGIQ-TAGPSSKGG-ADIQPLQVDESVSFDDIGGLSEYIDALKEMVFFPLLYPDFFAS 407
+T G T+G K +D PL VD ++ F +GGL YI+ LKEMV PLLYP+ + +
Sbjct: 369 ITGGSDDTSGKKKKSTLSDTDPLGVDMNIDFSVVGGLDNYINQLKEMVALPLLYPELYQN 428
Query: 408 YHITPPRGVLLCGPPGTGKTLIARALACAASKAGQKVSFYMRKGADVLSKWVGEAERQLK 467
+ ITPPRGVL GPPGTGKTL+ARALA + S + +K++F+MRKGAD LSKWVGEAERQL+
Sbjct: 429 FAITPPRGVLFHGPPGTGKTLMARALAASCSTSERKITFFMRKGADCLSKWVGEAERQLR 488
Query: 468 LLFEEAQRNQPSIIFFDEIDGLAPVRSSKQEQIHNSIVSTLLALMDGLDSRGQVVLIGAT 527
LLFEEA+ QPSIIFFDEIDGLAPVRSSKQEQIH SIVSTLLALMDG+D+RGQV++IGAT
Sbjct: 489 LLFEEAKNQQPSIIFFDEIDGLAPVRSSKQEQIHASIVSTLLALMDGMDNRGQVIVIGAT 548
Query: 528 NRVDAIDGALRRPGRFDREFNFPLPGCEARAEILDIHTRKWKQPPSRELKSE-LAASCVG 586
NR DAID ALRRPGRFDREF FPLP +R EIL IHTRKW P +L E LA G
Sbjct: 549 NRPDAIDPALRRPGRFDREFYFPLPDLGSRKEILKIHTRKWN-PELPDLFLERLAQLTKG 607
Query: 587 YCGADLKALCTEAAIRAFREKYPQVYTSDDKFLIDVDSVTVEKYHFIEAMSTITPAAHRG 646
Y GADL+ALCTEAA+ + + KYPQ+Y +++K ++ V V F++A+ I P++ R
Sbjct: 608 YGGADLRALCTEAALNSIQRKYPQIYGTNEKLKVNPSKVKVIAKDFMKAIEKIVPSSARS 667
Query: 647 ATVHSRPLSLVVAPCLQRHLQKAMNYISDIFP 678
+ S PLS + P L+ Q+ + ++ + P
Sbjct: 668 TSSGSAPLSEHLKPLLESEYQEIIEKLNQLLP 699
Score = 217 (81.4 bits), Expect = 1.1e-123, Sum P(4) = 1.1e-123
Identities = 64/235 (27%), Positives = 111/235 (47%)
Query: 701 VYRPRLLLCGSEGTGVDHLGPAILHELEKFPVHSLGLPALLSDPSAKTPEEALVHIFGEA 760
+ RP LL+ G+EG G +L A+L+ LE F V SL L + +P+ +TPE +V F EA
Sbjct: 744 ICRPHLLISGNEGNGQQYLSAAVLNHLEGFQVQSLDLGTMFGEPT-RTPESTIVQAFIEA 802
Query: 761 RRTTPSILYIPQFNLWWENAHXXXXXXXXXXXXXXXXXXPILLLGSSSVPLAEVEGDPST 820
RR P+IL+IP ++W+ +LLLG S P+ ++ +
Sbjct: 803 RRHQPAILFIPNIDIWFHVLPDPARATLTSLLRGLKSNEKVLLLGISETPIEDLSHEIKL 862
Query: 821 VFPLRSVYQ---VEKPSTEDRSLFLGRLIEAAVSVVLEGRSKKPQESVSLPELPKVPTVE 877
VF ++ + P R+ F L + + E E+ +L ++ V+
Sbjct: 863 VFGFQNATNNVILHNPQRSARAEFFETLKKTLLMKPYE--FVNDLENRPKRKLKELKVVQ 920
Query: 878 SGPKAS--EL-KAKVEAEQHALRRLRMCLR-DVCNRM-LYDKRFSAFHYPVTDED 927
+ + S EL K K++ +++ +L+ L+ + M L+ R+ F P+ DE+
Sbjct: 921 NTAEISNDELNKKKLKEQEYKDTKLKNVLKIKLAGLMDLFKVRYKKFRKPIIDEN 975
Score = 56 (24.8 bits), Expect = 1.1e-123, Sum P(4) = 1.1e-123
Identities = 13/35 (37%), Positives = 22/35 (62%)
Query: 939 MDLATLLQRVDSGHYVTCSAFLQDVDLIVTNAKVS 973
MDL + +R+ +G+Y FL+D+ +IV + VS
Sbjct: 1022 MDLDLIEERLWNGYYSEPKQFLKDLKMIVKDCIVS 1056
Score = 48 (22.0 bits), Expect = 1.1e-123, Sum P(4) = 1.1e-123
Identities = 22/97 (22%), Positives = 38/97 (39%)
Query: 10 DGSVPGPVRTSDRLRRRPKILGRTYLYYNPIRPRKSKTKARTAASQIARMFGPGKRTVRT 69
D ++P P+ +L + T + R K + R A FG G +
Sbjct: 246 DYTIPPPITADFQLEHEYRQATPTTVRSRRGRTGAPKNEFRKILYPTAGPFG-GSDVISL 304
Query: 70 SNKNSVP--LNLRRSTRKRRISVNLEDYTDSSGSEDE 104
KN P + + T ++ ++++DS SEDE
Sbjct: 305 FGKNIPPGGIPIPGMTGAPNMTAIGQNFSDSDSSEDE 341
Score = 42 (19.8 bits), Expect = 4.8e-123, Sum P(4) = 4.8e-123
Identities = 9/28 (32%), Positives = 18/28 (64%)
Query: 167 EQGSSEEKVGQDETENGNESDNDADDGQ 194
E+ ++ + +D+ E GN D++ DDG+
Sbjct: 136 EKKRTDNFIVKDDNEWGN--DDEEDDGE 161
Score = 39 (18.8 bits), Expect = 3.3e-100, Sum P(3) = 3.3e-100
Identities = 9/47 (19%), Positives = 23/47 (48%)
Query: 850 VSVVLEGRSKKPQESVSLPELPKVPTVESGPKASELKAKVEAEQHAL 896
V+ ++ G ++ E+ S + P +E+ + + +E EQ+ +
Sbjct: 1145 VAELMNGTTENANETDSKVVVENEPVIENEKTGNNTEDIIEIEQNVI 1191
>ASPGD|ASPL0000044770 [details] [associations]
symbol:AN10191 species:162425 "Emericella nidulans"
[GO:0042406 "extrinsic to endoplasmic reticulum membrane"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0042393
"histone binding" evidence=IEA] [GO:0003682 "chromatin binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0000122
"negative regulation of transcription from RNA polymerase II
promoter" evidence=IEA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0031936 "negative regulation of chromatin silencing"
evidence=IEA] InterPro:IPR001487 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004 Pfam:PF00439
PROSITE:PS00674 PROSITE:PS50014 SMART:SM00382 GO:GO:0005524
EMBL:BN001307 GO:GO:0017111 Gene3D:1.20.920.10 SUPFAM:SSF47370
EnsemblFungi:CADANIAT00008053 OMA:QPIMDQI Uniprot:C8VM55
Length = 1631
Score = 1144 (407.8 bits), Expect = 1.4e-120, Sum P(2) = 1.4e-120
Identities = 261/587 (44%), Positives = 340/587 (57%)
Query: 365 ADIQPLQVDESVSFDDIGGLSEYIDALKEMVFFPLLYPDFFASYHITPPRGVLLCGPPGT 424
AD PL VD V+FD++GGL +ID LKEMV PLLYP+ F +HI PPRGVL GPPGT
Sbjct: 555 ADADPLGVDMIVNFDNVGGLQGHIDQLKEMVSLPLLYPEIFQRFHIVPPRGVLFHGPPGT 614
Query: 425 GKTLIARALACAASKAGQKVSFYMRKGADVLSKWVGEAERQLKLLFEEAQRNQPSIIFFD 484
GKTL+ARALA + S G+KV+FYMRKGAD LSKWVGEAERQL+LLFEEA++ QPSIIFFD
Sbjct: 615 GKTLLARALANSVSSEGRKVTFYMRKGADALSKWVGEAERQLRLLFEEARKTQPSIIFFD 674
Query: 485 EIDGLAPVRSSKQEQIHNSIVSTLLALMDGLDSRGQVVLIGATNRVDAIDGALRRPGRFD 544
EIDGLAPVRSSKQEQIH SIVSTLLALMDG+D RGQV++IGATNR D+ID ALRRPGRFD
Sbjct: 675 EIDGLAPVRSSKQEQIHASIVSTLLALMDGMDGRGQVIVIGATNRPDSIDPALRRPGRFD 734
Query: 545 REFNFPLPGCEARAEILDIHTRKWKQPPSRELKSELAASCVGYCGADLKALCTEAAIRAF 604
REF FPLP E R ILDIHT+ W P +K ELA GY GADL+ALCTEAA+ A
Sbjct: 735 REFYFPLPNTEGRRAILDIHTKGWDPPLPNSIKDELAEITKGYGGADLRALCTEAALNAV 794
Query: 605 REKYPQVYTSDDKFLIDVDSVTVEKYHFIEAMSTITPAAHRGATVHSRPLSLVVAPCLQR 664
+ +YPQ+Y SD K LID ++ V F+ A+ ITP++ R + L V P L++
Sbjct: 795 QRRYPQIYKSDKKLLIDPRTIEVAPKDFMLAIKNITPSSERSTGSGASKLPKTVEPLLRQ 854
Query: 665 HLQKAMNYISDIFPPLGMSSELTKLCMLSHGSAIPL-----------------VYRPRLL 707
L + + + +I P LT L + ++ V+RPRLL
Sbjct: 855 PLAELKSILLEILP---QRKRLTALEEAQYEDSVESSMGFQREQMQQEFERSRVFRPRLL 911
Query: 708 LCGSEGTGVDHLGPAILHELEKFPVHSLGLPALLSDPSAKTPEEALVHIFGEARRTTPSI 767
L G+ G G +L A+LH E V + LP LLSD S +TPE A++ +F E +R PS+
Sbjct: 912 LRGALGMGQQYLAGALLHHFEGLHVQAFDLPTLLSD-STRTPEAAVIQLFAEVKRHKPSV 970
Query: 768 LYIPQFNLWWENAHXXXXXXXXXXXXXXXXXXPILLLG--SSSVPLAEVEGDPSTVFPLR 825
+YIP W + P+LLLG SS + + +
Sbjct: 971 IYIPGLQNWSQTVGQAVISTFMGLLRSIPPTDPVLLLGVLESSEDIDATLVRNLFGYSKK 1030
Query: 826 SVYQVEKPSTEDRSLFLGRLIEAAVSVVLEGRSKKPQESVSLPELPKVPTVESGPKASEL 885
+++++ P E R + ++I+ + ++ L EL P K
Sbjct: 1031 NIFELSPPGQEARYEYFAKVIDLIKASPSHLPDPDNRKKRQLEELEVAPPPPPPEKPPLS 1090
Query: 886 KAKVEAEQHA-LRRLRMCLRDVCNRMLYDKRFSAFHYPVTDEDAPNY 931
K +++A++ + L + + M K++ F V DE Y
Sbjct: 1091 KEELKAQKKKDYQTLNLLKIRIQPIMDQIKKYKRFRTGVIDESQIRY 1137
Score = 70 (29.7 bits), Expect = 1.4e-120, Sum P(2) = 1.4e-120
Identities = 30/100 (30%), Positives = 48/100 (48%)
Query: 87 RISVNLEDYTDSSGSEDEDLMRPSYRPLRNRMRNNMSQDELSPSKRKKVVEAKPTPRREG 146
RI +LE+ + S S+D+D S P+RN R+ S SK +K + +PT +R
Sbjct: 3 RIKRSLEEIANKSDSDDDDY---SDHPVRNSRRS------ASKSKSRK--KNRPTKKRAR 51
Query: 147 LRPRRSMVATRKQLNL--DSGDEQGSSEEK-VGQDETENG 183
+V+ +++ D D +GS EE+ V T G
Sbjct: 52 RDSDDDIVSDEDEISEFDDEFDFEGSPEEEDVDAPRTARG 91
Score = 57 (25.1 bits), Expect = 3.4e-119, Sum P(2) = 3.4e-119
Identities = 32/136 (23%), Positives = 58/136 (42%)
Query: 76 PLNLRRSTRKRRI-SVNLEDYTDSSGSEDEDLMRPSYRPLRNRMRNNMSQDELSPSKRKK 134
P RR+TR+ R S ++ T+S G + + + ++ P R R + + +P +
Sbjct: 146 PTGTRRTTRRNRDPSEDIYALTNS-GRHVQTVQKGTHSPEAERGRRSSRGSKRAPEVEGE 204
Query: 135 VVEAK-----PTPRREGLRP-RRSMVATRKQLNLDSGDEQGS---SEEKVGQDETENGN- 184
EA P E L + S + ++ D+ G +E++ E+ENG
Sbjct: 205 ADEADAKMEDPEVIEETLTEIKTSQLEIQESAPNSFRDDDGQDAPAEDEGFVPESENGEG 264
Query: 185 ----ESDNDADDGQNE 196
+ D+D DD +E
Sbjct: 265 NTKVDEDDDDDDDDDE 280
Score = 53 (23.7 bits), Expect = 8.9e-119, Sum P(2) = 8.9e-119
Identities = 26/92 (28%), Positives = 38/92 (41%)
Query: 64 KRTVRTSNKNSVPLNLRRSTRKRRISVNLEDYTDSSGSEDEDLMRPSYRPLRNRMRNNMS 123
+ T + ++ LRRS+RKR S +D +S +ED ++ S
Sbjct: 294 QNTQEATQQDEEENGLRRSSRKRPKSSQRKDDEESDFEPEEDDTHDE----DELSQSGKS 349
Query: 124 QDELSPSKRKKVVE---AKPTPRREGLRPRRS 152
Q SP K + + T RR GLR R S
Sbjct: 350 QG--SPRKTSQAHDDDYESSTGRRPGLRKRAS 379
Score = 51 (23.0 bits), Expect = 1.4e-118, Sum P(2) = 1.4e-118
Identities = 13/47 (27%), Positives = 25/47 (53%)
Query: 148 RPRRSMVATRKQLNLDSGDEQGSSEEKVGQ--DETE-NGNESDNDAD 191
+ R+ T+K+ DS D+ S E+++ + DE + G+ + D D
Sbjct: 38 KSRKKNRPTKKRARRDSDDDIVSDEDEISEFDDEFDFEGSPEEEDVD 84
Score = 50 (22.7 bits), Expect = 1.8e-118, Sum P(2) = 1.8e-118
Identities = 26/108 (24%), Positives = 41/108 (37%)
Query: 93 EDYTDSSGSEDEDLMRPSYRPLRNRMRNNMSQ-DE----LSPSKRKKVVEAKPTPRREG- 146
ED D ++ R RP RN+ +Q DE L S RK+ ++ E
Sbjct: 270 EDDDDDDDDDEGPTTRRRNRPNRNQNTQEATQQDEEENGLRRSSRKRPKSSQRKDDEESD 329
Query: 147 LRPRRSMVATRKQLNLDSGDEQGSSEEKVGQDETENGNESDNDADDGQ 194
P +L+ SG QGS + T ++ D ++ G+
Sbjct: 330 FEPEEDDTHDEDELS-QSGKSQGSPRK------TSQAHDDDYESSTGR 370
Score = 48 (22.0 bits), Expect = 3.0e-118, Sum P(2) = 3.0e-118
Identities = 20/101 (19%), Positives = 38/101 (37%)
Query: 97 DSSGSEDEDLMRPSYRPLRNRMRNNMSQDELSPSKRKKVVEAKPTPRREGLRPRRSMVAT 156
+ +D+D P+ R RNR N + E + E R RP+ S
Sbjct: 270 EDDDDDDDDDEGPTTRR-RNRPNRNQNTQEATQQDE----EENGLRRSSRKRPKSSQRKD 324
Query: 157 RKQLNLDSGDEQGSSEEKVGQDETENGN-ESDNDADDGQNE 196
++ + + ++ E+++ Q G+ + A D E
Sbjct: 325 DEESDFEPEEDDTHDEDELSQSGKSQGSPRKTSQAHDDDYE 365
Score = 44 (20.5 bits), Expect = 7.9e-118, Sum P(2) = 7.9e-118
Identities = 31/158 (19%), Positives = 63/158 (39%)
Query: 38 NPIRPRKSKTKARTAASQIARMFGPGK--RTVRTSNKNSVPLNLRRSTRKRRISVNLEDY 95
NP R++ + R + I + G+ +TV+ + RRS+R + + +E
Sbjct: 145 NPTGTRRTTRRNRDPSEDIYALTNSGRHVQTVQKGTHSPEAERGRRSSRGSKRAPEVEGE 204
Query: 96 TDSSGSEDEDLMRPSYRPLRNRMRNNMSQDELSPSKRKKVVEAKPTPRREGLRPRRSMVA 155
D + ++ ED P + +++ + S + ++ E+ P R+ A
Sbjct: 205 ADEADAKMED---PEV------IEETLTEIKTS---QLEIQESAPNSFRDD----DGQDA 248
Query: 156 TRKQLNLDSGDEQGSSEEKVGQDETENGNESDNDADDG 193
+ E G KV +D+ + D+D D+G
Sbjct: 249 PAEDEGFVPESENGEGNTKVDEDD-----DDDDDDDEG 281
Score = 43 (20.2 bits), Expect = 1.0e-117, Sum P(2) = 1.0e-117
Identities = 28/138 (20%), Positives = 53/138 (38%)
Query: 3 SKRSGQGDGSVPGPVRTSDRLRRRPKILGRTYLYYNPIRPRKSKTKARTAASQIARMFGP 62
++ + Q D G R+S R+RPK R + P + T SQ + G
Sbjct: 296 TQEATQQDEEENGLRRSS---RKRPKSSQRKDDEESDFEPEEDDTHDEDELSQSGKSQGS 352
Query: 63 GKRTVRTSNKNSVPLNLRRSTRKRRISVNLEDYTDSSGSEDEDLMRPSYRPLRNRMRNNM 122
++T + + + RR ++R S +S + + + + LR
Sbjct: 353 PRKTSQAHDDDYESSTGRRPGLRKRAS---RSRGESEAVDIAEELAEELQDLRGGRPRRR 409
Query: 123 SQDEL---SPSKRKKVVE 137
+Q E+ P + +K V+
Sbjct: 410 AQQEIVYEKPRRSRKNVD 427
>UNIPROTKB|G4N7L8 [details] [associations]
symbol:MGG_06380 "ATPase family AAA domain-containing
protein 2" species:242507 "Magnaporthe oryzae 70-15" [GO:0008150
"biological_process" evidence=ND] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0017111 EMBL:CM001234
RefSeq:XP_003717194.1 EnsemblFungi:MGG_06380T0 GeneID:2684535
KEGG:mgr:MGG_06380 Uniprot:G4N7L8
Length = 1706
Score = 1110 (395.8 bits), Expect = 2.5e-120, Sum P(3) = 2.5e-120
Identities = 257/616 (41%), Positives = 351/616 (56%)
Query: 321 GGLEMHGTTAWGLNVAASGWGHQGDTLAALTSGIQTAGPSSKGGADIQPLQVDESVSFDD 380
G + M TTA + A G A T + + K AD PL VD +V F
Sbjct: 563 GAVGMTPTTANAPALGAPLGALDGAAGVAATPNLGKV-KNQKAFADADPLGVDLTVDFSK 621
Query: 381 IGGLSEYIDALKEMVFFPLLYPDFFASYHITPPRGVLLCGPPGTGKTLIARALACAASKA 440
+GGL +ID LKEM+ PLLYP+ F Y +TPPRGVL GPPGTGKTL+ARAL+ A
Sbjct: 622 VGGLQGHIDQLKEMIMLPLLYPELFQRYKVTPPRGVLFHGPPGTGKTLLARALSNAVGIG 681
Query: 441 GQKVSFYMRKGADVLSKWVGEAERQLKLLFEEAQRNQPSIIFFDEIDGLAPVRSSKQEQI 500
G+K++FYMRKGAD LSKWVGEAE+QL+LLFEEA+R QPSIIFFDEIDGLAPVRSSKQEQI
Sbjct: 682 GRKITFYMRKGADALSKWVGEAEKQLRLLFEEARRTQPSIIFFDEIDGLAPVRSSKQEQI 741
Query: 501 HNSIVSTLLALMDGLDSRGQVVLIGATNRVDAIDGALRRPGRFDREFNFPLPGCEARAEI 560
H SIVSTLLALMDG+D RGQV++IGATNR D++D ALRRPGRFDREF FPLP E R I
Sbjct: 742 HASIVSTLLALMDGMDGRGQVIVIGATNRPDSVDPALRRPGRFDREFYFPLPDVEGRRSI 801
Query: 561 LDIHTRKWKQPPSRELKSELAASCVGYCGADLKALCTEAAIRAFREKYPQVYTSDDKFLI 620
+DIHT+ W + + K LA GY GADL+ALCTEAA+ + + YPQ+Y+S DK ++
Sbjct: 802 IDIHTKDWGL--ADDFKDSLARQTKGYGGADLRALCTEAALNSIQRTYPQIYSSTDKLIV 859
Query: 621 DVDSVTVEKYHFIEAMSTITPAAHRGATVHSRPLSLVVAPCLQRHLQKAMNYISDIFPPL 680
D + V++ F M I P++ R A+ + PL + P L + L + + + P
Sbjct: 860 DPNKVSIHATDFTIVMKKIIPSSQRSASSAAAPLPPSIEPLLSQQLASIVKDLDEALPRK 919
Query: 681 GMSSELTKLCM--------------LSHGSAIPLVYRPRLLLCGSEGTGVDHLGPAILHE 726
++ L + LS V+RPRLL+ G G G +++ A+LH
Sbjct: 920 KKTTALQEAMFEPYEDEDNGFGRENLSQEFDRLRVFRPRLLIAGRPGNGQEYISAALLHH 979
Query: 727 LEKFPVHSLGLPALLSDPSAKTPEEALVHIFGEARRTTPSILYIPQFNLWWENAHXXXXX 786
LE V + L LL+D S E+ +V +F E +R P++++IP W+
Sbjct: 980 LEGVFVQNFDLATLLADGSPL--EQVIVRLFTEVKRHKPAVIFIPDVGAWYATMPPLAYS 1037
Query: 787 XXXXXXXXXXXXXPILLLGSSSVPLAEV-EGDPSTVFPL--RSVYQVEKPSTEDRSLFLG 843
P+LLL +S + V E +F L ++ ++E PS R + G
Sbjct: 1038 TFVTMLRSIPATDPVLLLATSEDEVKTVDEVLLRDLFALSRKNRREIETPSNHHRREYFG 1097
Query: 844 RL---IEAAVSVVLEGRSKKPQESVSLPELPKVPTVESGPKASELKAKVEAEQHALRRLR 900
+L I + S + ++K + LP P P + P E++ ++ + AL L+
Sbjct: 1098 QLLSHIRMSPSEFPDPVNRKKRILEELPVAPPPPPRK--PTKEEIERELHNDHIALNHLK 1155
Query: 901 MCLRDVCN--RMLYDK 914
+ L+ + + +M Y K
Sbjct: 1156 LSLQPIMDQIKMKYRK 1171
Score = 75 (31.5 bits), Expect = 2.5e-120, Sum P(3) = 2.5e-120
Identities = 27/106 (25%), Positives = 44/106 (41%)
Query: 97 DSSGSEDEDLMRPSYRPLRNRMRNNMSQDELSPSKRKKVVEAKPTPRRE---GLRPRRSM 153
D +D+D+ P R R DE + + + EA P+ R+ LRP++++
Sbjct: 302 DVDDDDDDDV--PVTRRTRGLRAAKPQVDETNEDENENESEAAPSNTRKTRRSLRPKKAL 359
Query: 154 VATRKQLNLDSGDEQGSSEEKVGQDET--ENGNESD-NDADDGQNE 196
+ + GD+ G E V E + G S + DDG E
Sbjct: 360 --NEPSSDFEPGDDSGEGEGDVSASEASPKKGRRSRASQDDDGDEE 403
Score = 60 (26.2 bits), Expect = 9.5e-119, Sum P(3) = 9.5e-119
Identities = 17/68 (25%), Positives = 36/68 (52%)
Query: 75 VPLNLRRSTRKRRISVNLEDYTDSSGSEDEDLMRPSYRPLRNRMRNNMSQDELSPSKRKK 134
+P+N R R+ +V ++Y +SS + E++ + + ++ +D +P + KK
Sbjct: 88 MPVNAG-GRRTRKAAVKRQNYHESSDEDSEEIEETT-----DGDEDDEDEDSSAPKRNKK 141
Query: 135 VVE-AKPT 141
V E +KP+
Sbjct: 142 VAEKSKPS 149
Score = 56 (24.8 bits), Expect = 2.5e-120, Sum P(3) = 2.5e-120
Identities = 10/33 (30%), Positives = 21/33 (63%)
Query: 939 MDLATLLQRVDSGHYVTCSAFLQDVDLIVTNAK 971
+D+AT+ +R+ +G Y F +D+ + T+A+
Sbjct: 1231 LDVATIEERLSNGFYARPIDFFKDIASLATDAR 1263
Score = 56 (24.8 bits), Expect = 2.5e-118, Sum P(3) = 2.5e-118
Identities = 33/111 (29%), Positives = 48/111 (43%)
Query: 81 RSTRKRRISVNLEDYTDSSGSEDEDLMRPSYRPLRNRMRNNMSQDELSPSKRKKVVEAKP 140
RST+ R + Y S ED+D + P ++ +DE P V A
Sbjct: 42 RSTKARSSGRRRDRYGGSDIDEDDDDLISDSDP-DEAFDDDEDEDEDMP------VNAG- 93
Query: 141 TPRREGLRPRRSMVATRKQLNLDSGDEQGSSEEKVGQDETENGNESDNDAD 191
G R R++ A ++Q +S DE SEE +ET +G+E D D D
Sbjct: 94 -----GRRTRKA--AVKRQNYHESSDED--SEEI---EETTDGDEDDEDED 132
Score = 51 (23.0 bits), Expect = 8.4e-118, Sum P(3) = 8.4e-118
Identities = 34/152 (22%), Positives = 59/152 (38%)
Query: 46 KTKARTA-ASQIARMFGPGK--RTVRTSNKNSVPLNLRRSTRKRRISVNLEDYTDSSGSE 102
+T+A T A++ + G+ RT R S ++ P L R+TR + G +
Sbjct: 175 RTRAHTEEANEFLELSESGRHARTTRASTRSKSPEALGRATRATK------------GLK 222
Query: 103 DEDLMRPSYRPLRNRMRNNMSQDELSPSKRKKVVEAKPTPRREGLRPRRSMVATRKQLNL 162
+R P+ + N +Q+ P + + G +P S V ++
Sbjct: 223 G---LRKQPEPIEEATQENSAQERDQPDEVMAGADGA-ADELAGEQPEGSGVKGDEEAER 278
Query: 163 DSGDEQGSSEEKVGQ--DETENGNESDNDADD 192
GD + E Q + T G+ D+D DD
Sbjct: 279 MGGDVPQETIEGDEQHVENTAAGDVDDDDDDD 310
Score = 50 (22.7 bits), Expect = 1.1e-117, Sum P(3) = 1.1e-117
Identities = 17/61 (27%), Positives = 27/61 (44%)
Query: 139 KPTPRREGLRPRRSMVATRKQLNLDSG---DEQGSSEEKVGQDETENGNESDNDADDGQN 195
+P RE +PRR +R SG D G S+ D+ + ++ D DD ++
Sbjct: 25 EPGQEREE-KPRRVTKRSRSTKARSSGRRRDRYGGSDIDEDDDDLISDSDPDEAFDDDED 83
Query: 196 E 196
E
Sbjct: 84 E 84
Score = 49 (22.3 bits), Expect = 1.4e-117, Sum P(3) = 1.4e-117
Identities = 16/47 (34%), Positives = 24/47 (51%)
Query: 236 NRAEVRRLSVEEGKQRPRSPRRVLHQGIGTKV---GRDV-RKGGSRV 278
N+++ + E G++R PRRV + TK GR R GGS +
Sbjct: 15 NQSDPDDENFEPGQEREEKPRRVTKRSRSTKARSSGRRRDRYGGSDI 61
Score = 48 (22.0 bits), Expect = 1.7e-117, Sum P(3) = 1.7e-117
Identities = 19/72 (26%), Positives = 27/72 (37%)
Query: 121 NMSQDELSPSK--RKKVVEAKPTPRREGLRPRRSMVATRKQLNLDSGDEQGSSEEKVGQD 178
++S E SP K R + + G R RR R SGDE ++ +
Sbjct: 378 DVSASEASPKKGRRSRASQDDDGDEEFGARGRRGTQGKRGANRRGSGDEDVELDQDELAE 437
Query: 179 ETENGNESDNDA 190
E E +S A
Sbjct: 438 ELEELRQSSRAA 449
Score = 44 (20.5 bits), Expect = 4.6e-117, Sum P(3) = 4.6e-117
Identities = 18/90 (20%), Positives = 33/90 (36%)
Query: 107 MRPSYRPLRNRMRNNMSQDELSPSKRKKVVEAKPTPRREGLRPRRSMVATRKQLNLDSGD 166
+R P+ + N +Q+ P + + G +P S V ++ GD
Sbjct: 224 LRKQPEPIEEATQENSAQERDQPDEVMAGADGA-ADELAGEQPEGSGVKGDEEAERMGGD 282
Query: 167 EQGSSEEKVGQDETENGNESDNDADDGQNE 196
+E + DE N + D DD ++
Sbjct: 283 VP---QETIEGDEQHVENTAAGDVDDDDDD 309
Score = 42 (19.8 bits), Expect = 7.5e-117, Sum P(3) = 7.5e-117
Identities = 17/58 (29%), Positives = 27/58 (46%)
Query: 80 RRSTRKRRISVNLEDYTDSSGSEDEDLMRPSYRPLRNRMRNNMSQDELSPSKRKKVVE 137
R + R+ ++E D E E+L R S R R R R+ E +KR++V +
Sbjct: 416 RGANRRGSGDEDVELDQDELAEELEEL-RQSSRAARRRRRSPSIAYEEPRTKRRRVTK 472
>WB|WBGene00008682 [details] [associations]
symbol:lex-1 species:6239 "Caenorhabditis elegans"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0009792 "embryo development ending in
birth or egg hatching" evidence=IMP] [GO:0008406 "gonad
development" evidence=IMP] [GO:0007126 "meiosis" evidence=IMP]
[GO:0045132 "meiotic chromosome segregation" evidence=IMP]
InterPro:IPR001487 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 Pfam:PF00439 PRINTS:PR00503
PROSITE:PS00674 PROSITE:PS50014 SMART:SM00297 SMART:SM00382
GO:GO:0005524 GO:GO:0009792 GO:GO:0008406 GO:GO:0006351
eggNOG:COG0464 GO:GO:0017111 GO:GO:0045132 Gene3D:1.20.920.10
SUPFAM:SSF47370 PROSITE:PS00633 InterPro:IPR018359 EMBL:Z68297
EMBL:Z68316 EMBL:DQ140399 PIR:T20739 RefSeq:NP_001122768.1
RefSeq:NP_001122769.1 RefSeq:NP_502289.2 UniGene:Cel.6917
ProteinModelPortal:P54816 SMR:P54816 STRING:P54816 PaxDb:P54816
EnsemblMetazoa:F11A10.1a.1 EnsemblMetazoa:F11A10.1a.2 GeneID:178146
KEGG:cel:CELE_F11A10.1 UCSC:F11A10.1a CTD:178146 WormBase:F11A10.1a
WormBase:F11A10.1b WormBase:F11A10.1c GeneTree:ENSGT00550000074694
HOGENOM:HOG000154515 InParanoid:P54816 OMA:QDETENG NextBio:899910
GO:GO:0031445 Uniprot:P54816
Length = 1291
Score = 1098 (391.6 bits), Expect = 1.8e-116, Sum P(2) = 1.8e-116
Identities = 256/630 (40%), Positives = 360/630 (57%)
Query: 360 SSKGGADIQPLQVDESVSFDDIGGLSEYIDALKEMVFFPLLYPDFFASYHITPPRGVLLC 419
+ +G +DI P+ VD SV FD +GGL +I +LKE+V FP+LYP+ F + I PP+GV+
Sbjct: 372 AGQGASDIDPMSVDSSVGFDQVGGLGHHIQSLKEVVLFPMLYPEVFEKFRINPPKGVVFY 431
Query: 420 GPPGTGKTLIARALACAASKAGQKVSFYMRKGADVLSKWVGEAERQLKLLFEEAQRNQPS 479
GPPGTGKTL+ARALA + KV+F+MRKGAD LSKWVGE+ERQL+LLF++A +PS
Sbjct: 432 GPPGTGKTLVARALANECRRGANKVAFFMRKGADCLSKWVGESERQLRLLFDQAYAMRPS 491
Query: 480 IIFFDEIDGLAPVRSSKQEQIHNSIVSTLLALMDGLDSRGQVVLIGATNRVDAIDGALRR 539
IIFFDEIDGLAPVRSSKQ+QIH SIVSTLLALMDGLD RG+VV+IGATNR+D +D ALRR
Sbjct: 492 IIFFDEIDGLAPVRSSKQDQIHASIVSTLLALMDGLDGRGEVVVIGATNRLDTLDPALRR 551
Query: 540 PGRFDREFNFPLPGCEARAEILDIHTRKWKQ-PPSRELKSELAASCVGYCGADLKALCTE 598
PGRFDRE F LP AR +ILDIHT KW++ P E +A GYCGADLK LCTE
Sbjct: 552 PGRFDRELRFSLPDLNARRQILDIHTSKWEENKPIPETLDAIAERTSGYCGADLKFLCTE 611
Query: 599 AAIRAFREKYPQVYTSDDKFLIDVDSVTVEKYHFIEAMSTITPAAHRGATVHSRPL---- 654
A + R +YP +Y ++ +DV ++ + HF AM ITPA+ R T+ SRPL
Sbjct: 612 AVLIGLRSRYPHIYMCSERLKLDVATIKITSEHFGHAMRRITPASRRDLTIPSRPLDERT 671
Query: 655 SLVVAPCLQR--HLQKAMNYISDIFPPLGMSSELTKLCM-LSHGSAIPLVYRPRLLLCGS 711
S+++ + L+ Y SSEL ++ L +P + RLLLCGS
Sbjct: 672 SILLGDTVSNLISLRIPQGYRCVENAMATASSELEQVVRALEPNPTVPAI---RLLLCGS 728
Query: 712 E----GTGVDHLGPAILHELEKFPVHSLGLPALLSDPSAKTPEEALVHIFGEARR---TT 764
E G ++ PAIL +L+ PV SL + +LL+D PEEA + A R T
Sbjct: 729 EQLADGGQTSYVLPAILAKLDHLPVFSLSVSSLLTDGR---PEEAFSNAIQSAMRASATG 785
Query: 765 PSILYIPQFNLWWENAHXXXXXXXXXXXXXXXXXXPILLLGSSSVPLAEVEGDPSTVFPL 824
P I+ +P + W + PIL L + + + +F
Sbjct: 786 PCIMLLPSIDEWIKVIPVSVQHMLITCLESMTGFTPILFLSTLDTSFEDAPEYVTEIFRH 845
Query: 825 RSVYQVEKPSTEDRSLFLGRLIEAAVSVVLEGRSKKPQESVSLPELPKVPTVESGP--KA 882
+ + R + +IE + K +V LP + +S P K
Sbjct: 846 ANCITLNPSRRTIRQKYFEHVIEK-----INTPPKVFDPTVYEMPLPDDDSPDSKPSRKL 900
Query: 883 SELKAKVEAEQH-ALRR-LRMCLRDVCNRMLYDKRFSAFHYPVTDEDAPNYRSIIQNPMD 940
++ + + + + AL+R +R+ ++ R++ D+RF F PV ++A +Y II+ P+
Sbjct: 901 NDDETRELLKMYTALQRQMRLFFKERLTRLMRDRRFVEFVEPVDPDEAEDYYEIIETPIC 960
Query: 941 LATLLQRVDSGHYVTCSAFLQDVDLIVTNA 970
+ +++++++ Y F+ D+ LI TNA
Sbjct: 961 MQDIMEKLNNCEYNHADKFVADLILIQTNA 990
Score = 70 (29.7 bits), Expect = 1.8e-116, Sum P(2) = 1.8e-116
Identities = 33/130 (25%), Positives = 54/130 (41%)
Query: 72 KNSVPLNL-RRSTRKRRISVNLEDYTDSSGSEDEDLMRPSYRPLRNRMRNNMSQDELSPS 130
+N+VP RRSTR+R ++ + S E+ + R R R+ + ++ L+
Sbjct: 136 ENTVPERATRRSTRRRS---SMHEELGVSEQEESPVRRT--RKAAKRLGSEQPEENLAAD 190
Query: 131 KRKKVVEAKPTPRREG---LRPRRSMVATRKQLNLDSGDEQGSSEEKVGQDETENGNESD 187
P P G + P + +Q N D ++ G EE+ G +E E E D
Sbjct: 191 D--------PLPMEGGGEIVLPIAEIDGMAEQENEDLIEKIGREEEEEGAEEDEQSGEKD 242
Query: 188 --NDADDGQN 195
+ DD N
Sbjct: 243 PEEEEDDSSN 252
Score = 60 (26.2 bits), Expect = 2.0e-115, Sum P(2) = 2.0e-115
Identities = 42/182 (23%), Positives = 73/182 (40%)
Query: 36 YYNPIRPRKSKTKARTAASQIARMFGPG-KRTVRTSNKNS-VPLNLRRSTRKRRISVNLE 93
Y+ I + + + RT S + + + + S +N VP R+ R E
Sbjct: 70 YHEAISSEEDERRYRTRRSSNSMTYRQQVMQAIDESKRNQKVPPAKRK--RIYLSDEEEE 127
Query: 94 DYTDSSGSEDEDLMRPSYRPLRNR--MRNNM--SQDELSPSKRKKVVEAKPTPRREGLRP 149
D+ +++ E+ R + R R R M + S+ E SP +R + K R +P
Sbjct: 128 DFAEAAHVENTVPERATRRSTRRRSSMHEELGVSEQEESPVRRTR----KAAKRLGSEQP 183
Query: 150 RRSMVATRKQLNLDSGDE--------QGSSE-------EKVGQDETENGNESDNDADDGQ 194
++ A L ++ G E G +E EK+G++E E G E D + +
Sbjct: 184 EENLAAD-DPLPMEGGGEIVLPIAEIDGMAEQENEDLIEKIGREEEEEGAEEDEQSGEKD 242
Query: 195 NE 196
E
Sbjct: 243 PE 244
Score = 48 (22.0 bits), Expect = 3.8e-114, Sum P(2) = 3.8e-114
Identities = 20/54 (37%), Positives = 26/54 (48%)
Query: 68 RTSNKNSVPLNLRRSTRKRRISVNLEDYTDS-SGSEDEDLMRPSYRPLRNRMRN 120
R +N+N N R +R+RR +DS S S+D L RP R R M N
Sbjct: 293 RVANQNRHHRN-RNGSRRRR--------SDSDSDSDDMVLPRPDKRQSRPHMHN 337
Score = 45 (20.9 bits), Expect = 7.8e-114, Sum P(2) = 7.8e-114
Identities = 34/107 (31%), Positives = 47/107 (43%)
Query: 43 RKSKTKARTAASQIAR----MFGPGKRTVRTSNKNSVPLNLRRSTRKRRISVNL---EDY 95
R ++ +R+ A Q M+ P R R S+ RS RK I+ N E+Y
Sbjct: 15 RSARDHSRSYAGQCNEDFDDMYAPSSR--RRSSGGVDGNGYTRSGRK--INHNRYYEEEY 70
Query: 96 TDSSGSEDEDLMRPSYRPLRNRM--RNNMSQDELSPSKR-KKVVEAK 139
++ SE ED R R N M R + Q + SKR +KV AK
Sbjct: 71 HEAISSE-EDERRYRTRRSSNSMTYRQQVMQ-AIDESKRNQKVPPAK 115
Score = 44 (20.5 bits), Expect = 9.9e-114, Sum P(2) = 9.9e-114
Identities = 19/77 (24%), Positives = 33/77 (42%)
Query: 124 QDELSPSKRKKVVEAKPTPRREGLRPRRSMV---ATRKQLNLDSGDEQGSSEEKVGQDET 180
++E S + E PR+ LR R+ +V A+ + N + E +
Sbjct: 244 EEEEDDSSNAESSEESTAPRQYSLRRRQPVVQFNASEARENRRARLEHHRVANQNRHHRN 303
Query: 181 ENGN-----ESDNDADD 192
NG+ +SD+D+DD
Sbjct: 304 RNGSRRRRSDSDSDSDD 320
>UNIPROTKB|P54816 [details] [associations]
symbol:lex-1 "Tat-binding homolog 7" species:6239
"Caenorhabditis elegans" [GO:0005575 "cellular_component"
evidence=ND] [GO:0003674 "molecular_function" evidence=ND]
[GO:0031445 "regulation of heterochromatin assembly" evidence=IMP]
InterPro:IPR001487 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 Pfam:PF00439 PRINTS:PR00503
PROSITE:PS00674 PROSITE:PS50014 SMART:SM00297 SMART:SM00382
GO:GO:0005524 GO:GO:0009792 GO:GO:0008406 GO:GO:0006351
eggNOG:COG0464 GO:GO:0017111 GO:GO:0045132 Gene3D:1.20.920.10
SUPFAM:SSF47370 PROSITE:PS00633 InterPro:IPR018359 EMBL:Z68297
EMBL:Z68316 EMBL:DQ140399 PIR:T20739 RefSeq:NP_001122768.1
RefSeq:NP_001122769.1 RefSeq:NP_502289.2 UniGene:Cel.6917
ProteinModelPortal:P54816 SMR:P54816 STRING:P54816 PaxDb:P54816
EnsemblMetazoa:F11A10.1a.1 EnsemblMetazoa:F11A10.1a.2 GeneID:178146
KEGG:cel:CELE_F11A10.1 UCSC:F11A10.1a CTD:178146 WormBase:F11A10.1a
WormBase:F11A10.1b WormBase:F11A10.1c GeneTree:ENSGT00550000074694
HOGENOM:HOG000154515 InParanoid:P54816 OMA:QDETENG NextBio:899910
GO:GO:0031445 Uniprot:P54816
Length = 1291
Score = 1098 (391.6 bits), Expect = 1.8e-116, Sum P(2) = 1.8e-116
Identities = 256/630 (40%), Positives = 360/630 (57%)
Query: 360 SSKGGADIQPLQVDESVSFDDIGGLSEYIDALKEMVFFPLLYPDFFASYHITPPRGVLLC 419
+ +G +DI P+ VD SV FD +GGL +I +LKE+V FP+LYP+ F + I PP+GV+
Sbjct: 372 AGQGASDIDPMSVDSSVGFDQVGGLGHHIQSLKEVVLFPMLYPEVFEKFRINPPKGVVFY 431
Query: 420 GPPGTGKTLIARALACAASKAGQKVSFYMRKGADVLSKWVGEAERQLKLLFEEAQRNQPS 479
GPPGTGKTL+ARALA + KV+F+MRKGAD LSKWVGE+ERQL+LLF++A +PS
Sbjct: 432 GPPGTGKTLVARALANECRRGANKVAFFMRKGADCLSKWVGESERQLRLLFDQAYAMRPS 491
Query: 480 IIFFDEIDGLAPVRSSKQEQIHNSIVSTLLALMDGLDSRGQVVLIGATNRVDAIDGALRR 539
IIFFDEIDGLAPVRSSKQ+QIH SIVSTLLALMDGLD RG+VV+IGATNR+D +D ALRR
Sbjct: 492 IIFFDEIDGLAPVRSSKQDQIHASIVSTLLALMDGLDGRGEVVVIGATNRLDTLDPALRR 551
Query: 540 PGRFDREFNFPLPGCEARAEILDIHTRKWKQ-PPSRELKSELAASCVGYCGADLKALCTE 598
PGRFDRE F LP AR +ILDIHT KW++ P E +A GYCGADLK LCTE
Sbjct: 552 PGRFDRELRFSLPDLNARRQILDIHTSKWEENKPIPETLDAIAERTSGYCGADLKFLCTE 611
Query: 599 AAIRAFREKYPQVYTSDDKFLIDVDSVTVEKYHFIEAMSTITPAAHRGATVHSRPL---- 654
A + R +YP +Y ++ +DV ++ + HF AM ITPA+ R T+ SRPL
Sbjct: 612 AVLIGLRSRYPHIYMCSERLKLDVATIKITSEHFGHAMRRITPASRRDLTIPSRPLDERT 671
Query: 655 SLVVAPCLQR--HLQKAMNYISDIFPPLGMSSELTKLCM-LSHGSAIPLVYRPRLLLCGS 711
S+++ + L+ Y SSEL ++ L +P + RLLLCGS
Sbjct: 672 SILLGDTVSNLISLRIPQGYRCVENAMATASSELEQVVRALEPNPTVPAI---RLLLCGS 728
Query: 712 E----GTGVDHLGPAILHELEKFPVHSLGLPALLSDPSAKTPEEALVHIFGEARR---TT 764
E G ++ PAIL +L+ PV SL + +LL+D PEEA + A R T
Sbjct: 729 EQLADGGQTSYVLPAILAKLDHLPVFSLSVSSLLTDGR---PEEAFSNAIQSAMRASATG 785
Query: 765 PSILYIPQFNLWWENAHXXXXXXXXXXXXXXXXXXPILLLGSSSVPLAEVEGDPSTVFPL 824
P I+ +P + W + PIL L + + + +F
Sbjct: 786 PCIMLLPSIDEWIKVIPVSVQHMLITCLESMTGFTPILFLSTLDTSFEDAPEYVTEIFRH 845
Query: 825 RSVYQVEKPSTEDRSLFLGRLIEAAVSVVLEGRSKKPQESVSLPELPKVPTVESGP--KA 882
+ + R + +IE + K +V LP + +S P K
Sbjct: 846 ANCITLNPSRRTIRQKYFEHVIEK-----INTPPKVFDPTVYEMPLPDDDSPDSKPSRKL 900
Query: 883 SELKAKVEAEQH-ALRR-LRMCLRDVCNRMLYDKRFSAFHYPVTDEDAPNYRSIIQNPMD 940
++ + + + + AL+R +R+ ++ R++ D+RF F PV ++A +Y II+ P+
Sbjct: 901 NDDETRELLKMYTALQRQMRLFFKERLTRLMRDRRFVEFVEPVDPDEAEDYYEIIETPIC 960
Query: 941 LATLLQRVDSGHYVTCSAFLQDVDLIVTNA 970
+ +++++++ Y F+ D+ LI TNA
Sbjct: 961 MQDIMEKLNNCEYNHADKFVADLILIQTNA 990
Score = 70 (29.7 bits), Expect = 1.8e-116, Sum P(2) = 1.8e-116
Identities = 33/130 (25%), Positives = 54/130 (41%)
Query: 72 KNSVPLNL-RRSTRKRRISVNLEDYTDSSGSEDEDLMRPSYRPLRNRMRNNMSQDELSPS 130
+N+VP RRSTR+R ++ + S E+ + R R R+ + ++ L+
Sbjct: 136 ENTVPERATRRSTRRRS---SMHEELGVSEQEESPVRRT--RKAAKRLGSEQPEENLAAD 190
Query: 131 KRKKVVEAKPTPRREG---LRPRRSMVATRKQLNLDSGDEQGSSEEKVGQDETENGNESD 187
P P G + P + +Q N D ++ G EE+ G +E E E D
Sbjct: 191 D--------PLPMEGGGEIVLPIAEIDGMAEQENEDLIEKIGREEEEEGAEEDEQSGEKD 242
Query: 188 --NDADDGQN 195
+ DD N
Sbjct: 243 PEEEEDDSSN 252
Score = 60 (26.2 bits), Expect = 2.0e-115, Sum P(2) = 2.0e-115
Identities = 42/182 (23%), Positives = 73/182 (40%)
Query: 36 YYNPIRPRKSKTKARTAASQIARMFGPG-KRTVRTSNKNS-VPLNLRRSTRKRRISVNLE 93
Y+ I + + + RT S + + + + S +N VP R+ R E
Sbjct: 70 YHEAISSEEDERRYRTRRSSNSMTYRQQVMQAIDESKRNQKVPPAKRK--RIYLSDEEEE 127
Query: 94 DYTDSSGSEDEDLMRPSYRPLRNR--MRNNM--SQDELSPSKRKKVVEAKPTPRREGLRP 149
D+ +++ E+ R + R R R M + S+ E SP +R + K R +P
Sbjct: 128 DFAEAAHVENTVPERATRRSTRRRSSMHEELGVSEQEESPVRRTR----KAAKRLGSEQP 183
Query: 150 RRSMVATRKQLNLDSGDE--------QGSSE-------EKVGQDETENGNESDNDADDGQ 194
++ A L ++ G E G +E EK+G++E E G E D + +
Sbjct: 184 EENLAAD-DPLPMEGGGEIVLPIAEIDGMAEQENEDLIEKIGREEEEEGAEEDEQSGEKD 242
Query: 195 NE 196
E
Sbjct: 243 PE 244
Score = 48 (22.0 bits), Expect = 3.8e-114, Sum P(2) = 3.8e-114
Identities = 20/54 (37%), Positives = 26/54 (48%)
Query: 68 RTSNKNSVPLNLRRSTRKRRISVNLEDYTDS-SGSEDEDLMRPSYRPLRNRMRN 120
R +N+N N R +R+RR +DS S S+D L RP R R M N
Sbjct: 293 RVANQNRHHRN-RNGSRRRR--------SDSDSDSDDMVLPRPDKRQSRPHMHN 337
Score = 45 (20.9 bits), Expect = 7.8e-114, Sum P(2) = 7.8e-114
Identities = 34/107 (31%), Positives = 47/107 (43%)
Query: 43 RKSKTKARTAASQIAR----MFGPGKRTVRTSNKNSVPLNLRRSTRKRRISVNL---EDY 95
R ++ +R+ A Q M+ P R R S+ RS RK I+ N E+Y
Sbjct: 15 RSARDHSRSYAGQCNEDFDDMYAPSSR--RRSSGGVDGNGYTRSGRK--INHNRYYEEEY 70
Query: 96 TDSSGSEDEDLMRPSYRPLRNRM--RNNMSQDELSPSKR-KKVVEAK 139
++ SE ED R R N M R + Q + SKR +KV AK
Sbjct: 71 HEAISSE-EDERRYRTRRSSNSMTYRQQVMQ-AIDESKRNQKVPPAK 115
Score = 44 (20.5 bits), Expect = 9.9e-114, Sum P(2) = 9.9e-114
Identities = 19/77 (24%), Positives = 33/77 (42%)
Query: 124 QDELSPSKRKKVVEAKPTPRREGLRPRRSMV---ATRKQLNLDSGDEQGSSEEKVGQDET 180
++E S + E PR+ LR R+ +V A+ + N + E +
Sbjct: 244 EEEEDDSSNAESSEESTAPRQYSLRRRQPVVQFNASEARENRRARLEHHRVANQNRHHRN 303
Query: 181 ENGN-----ESDNDADD 192
NG+ +SD+D+DD
Sbjct: 304 RNGSRRRRSDSDSDSDD 320
>POMBASE|SPBP22H7.05c [details] [associations]
symbol:abo2 "ATPase with bromodomain protein
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0000790
"nuclear chromatin" evidence=ISM] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IDA] [GO:0006338
"chromatin remodeling" evidence=ISM] [GO:0016887 "ATPase activity"
evidence=ISM] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=ISO] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 PomBase:SPBP22H7.05c GO:GO:0005524 EMBL:CU329671
GO:GO:0045944 GO:GO:0016887 GO:GO:0006338 GO:GO:0000790 HSSP:Q01853
eggNOG:COG0464 EMBL:AB004535 RefSeq:NP_595602.1
ProteinModelPortal:Q9C0W2 EnsemblFungi:SPBP22H7.05c.1
GeneID:2541287 KEGG:spo:SPBP22H7.05c OrthoDB:EOG4N07QZ
NextBio:20802398 Uniprot:Q9C0W2
Length = 1201
Score = 1001 (357.4 bits), Expect = 1.9e-108, Sum P(3) = 1.9e-108
Identities = 249/609 (40%), Positives = 334/609 (54%)
Query: 332 GLNVAASGWGHQGDTLAALTSGIQTAGPSSKGGADIQPLQVDESVSFDDIGGLSEYIDAL 391
GLN A + G D A +S + K P E++ F+ IGGL + I L
Sbjct: 326 GLN-AYNNLGASSDIENAPSSQLHFGHIDEKTIRSTDPFANRENLDFNSIGGLEDIILQL 384
Query: 392 KEMVFFPLLYPDFFASYHITPPRGVLLCGPPGTGKTLIARALACAASKAGQKVSFYMRKG 451
KEMV PLLYP+ F HITPPRGVL GPPGTGKTL+AR LA S QK+SF++RKG
Sbjct: 385 KEMVMLPLLYPEVFLHLHITPPRGVLFHGPPGTGKTLMARVLAANCSTKNQKISFFLRKG 444
Query: 452 ADVLSKWVGEAERQLKLLFEEAQRNQPSIIFFDEIDGLAPVRSSKQEQIHNSIVSTLLAL 511
+D LSKWVGEAERQL+LLFEEA+R QPSIIFFDEIDGLAP+RSSKQEQ H+SIVSTLLAL
Sbjct: 445 SDCLSKWVGEAERQLRLLFEEARRVQPSIIFFDEIDGLAPIRSSKQEQTHSSIVSTLLAL 504
Query: 512 MDGLDSRGQVVLIGATNRVDAIDGALRRPGRFDREFNFPLPGCEARAEILDIHTRKWKQP 571
MDGLD+RGQVV+IGATNR + +D ALRRPGRFDREF FPLP +AR +IL+I++ +
Sbjct: 505 MDGLDTRGQVVVIGATNRPNDLDPALRRPGRFDREFYFPLPNKQARMKILEINSLHFSPK 564
Query: 572 PSRELKSELAASCVGYCGADLKALCTEAAIRAFREKYPQVYTSDDKFLIDVDSVTVEKYH 631
LA S GY GADLKALCTEAA+ A R +PQ+YTS DKFLID++ ++V
Sbjct: 565 IPESYLLHLAESTSGYGGADLKALCTEAALNAVRRTFPQIYTSSDKFLIDLNEISVSICD 624
Query: 632 FIEAMSTITPAAHRGATVHSRPLS----LVVAPCLQRHLQKAMNYIS-DIFPPLGMSSEL 686
F+ A I + R + P++ ++ ++ K + D++ P S +
Sbjct: 625 FVVASEKIAVSTRRSDVKPNIPITDSHKILFKKSIEVITSKIRRLLKLDVYLPTVESLQK 684
Query: 687 TKLCMLSHGSAI-----PLVYRPRLLLCGSEGTGVDHLGPAILHELEKFPVHSLGLPALL 741
L I + +RPRLL+ G G +L + L+ V SL + LL
Sbjct: 685 LPAEELMRQKEINSLKTTMSFRPRLLITDIYGYGCTYLSKVLFSMLDGIHVQSLDISELL 744
Query: 742 SDPSAKTPEEALVHIFGEARRTTPSILYIPQFNLWWENAHXXXXXXXXXXXXXXXXXXPI 801
D + +P L IF EAR+ PSI++I W P+
Sbjct: 745 MDTTT-SPRSLLTKIFSEARKNAPSIIFINNVEKWPSLFSHSFLSMFLLLLDSISPLEPV 803
Query: 802 LLLGSSSVPLAEVEGDPSTVFPL-RSVYQ-VEKPSTEDRSLFLGRLIEAAVSVVLEGRSK 859
+LLG ++ ++ + FP RS Y + P R F L++ + + +
Sbjct: 804 MLLGFANTNQEKLSSTVRSWFPSHRSEYHDLSFPDYSSRYSFFHYLLKRISFLPIH---Q 860
Query: 860 KPQESVSLPELPKVPTVESGPKASELKAKVEAEQHAL-RRLRMCLRDVCNRML--YDKRF 916
K E+ S+ LPKV V K S+L KV Q ++++ ++ + +L R+
Sbjct: 861 KSAEAASVDILPKVLPVS---KTSDLTDKVNRRQRKNDKKIKNKIQVKLSSILEMLRSRY 917
Query: 917 SAFHYPVTD 925
F P+ D
Sbjct: 918 KKFKKPIID 926
Score = 53 (23.7 bits), Expect = 1.9e-108, Sum P(3) = 1.9e-108
Identities = 24/115 (20%), Positives = 42/115 (36%)
Query: 84 RKRRISVNLEDYTDSSGSEDEDLMRPSYRPLRNRMRNNMSQDELSPSKRK-KVVEAKPTP 142
R+R S+ + ED+D ++ N++ PS K K+V + T
Sbjct: 2 RRRARSIRFSSDDNEDNEEDDDYYSNAHSEKSEDHSNHIKVSHFDPSSYKQKLVSVRETQ 61
Query: 143 RREGLRPRRSMVATRKQLNLD----SGDEQGSSEEKVGQDETENGNESDNDADDG 193
R R + +K LN + S + S+ ++ G +S DG
Sbjct: 62 RN------RKFSSLQKHLNTETPSFSVSIENPSKPSAAFNDASLGKKSTEHQIDG 110
Score = 52 (23.4 bits), Expect = 1.9e-108, Sum P(3) = 1.9e-108
Identities = 12/35 (34%), Positives = 21/35 (60%)
Query: 939 MDLATLLQRVDSGHYVTCSAFLQDVDLIVTNAKVS 973
M+ + +R+ SG Y T FL+D+ +I +A +S
Sbjct: 969 MNFEEIERRLWSGRYCTPKEFLRDIKMIKQDAILS 1003
Score = 49 (22.3 bits), Expect = 5.0e-108, Sum P(3) = 5.0e-108
Identities = 30/147 (20%), Positives = 66/147 (44%)
Query: 66 TVRTSNKNSVPLNLRR--STRKRRISVNLEDYTDSSGS-EDEDLMRPSYRPLRNRMRNNM 122
+VR + +N +L++ +T SV++E+ + S + D L + S + +RN
Sbjct: 56 SVRETQRNRKFSSLQKHLNTETPSFSVSIENPSKPSAAFNDASLGKKSTEHQIDGIRNGS 115
Query: 123 SQDELSPSKRKKVV---EAKPTP---RREGLRPRRSMVATRKQLNLDSGDEQGSS----- 171
S ++ + ++ E + T + L +S + + K + + ++
Sbjct: 116 SNLQMEGNDKELDTDNNEDESTTFKDEEDDLISPKSYLTSSKTFSYPKAPTESTNGDYLD 175
Query: 172 EEKV-GQDETENGNESDNDADDGQNEI 197
E+ V GQ + E+ N SD+D D +++
Sbjct: 176 EDYVDGQSDPESSNASDSDFADSPDDL 202
Score = 43 (20.2 bits), Expect = 2.1e-107, Sum P(3) = 2.1e-107
Identities = 15/70 (21%), Positives = 28/70 (40%)
Query: 93 EDYTDS-SGSEDEDLMRPSYRPLRNRMRNNMSQDELSPSKRKKVVEAKPTPRREGLRPRR 151
EDY D S E + + + + S +RK+ + P ++ LR ++
Sbjct: 176 EDYVDGQSDPESSNASDSDFADSPDDLTKVRSPIPSRRGRRKRKMRGPILPVKKNLRVKK 235
Query: 152 SMVATRKQLN 161
+M R + N
Sbjct: 236 AMSPLRAERN 245
>MGI|MGI:1917722 [details] [associations]
symbol:Atad2 "ATPase family, AAA domain containing 2"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0008150 "biological_process"
evidence=ND] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR001487 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 Pfam:PF00439 PRINTS:PR00503
PROSITE:PS00674 PROSITE:PS50014 SMART:SM00297 SMART:SM00382
MGI:MGI:1917722 GO:GO:0005524 GO:GO:0005634 GO:GO:0006355
GO:GO:0006200 GO:GO:0006351 GO:GO:0016887 eggNOG:COG0464
Gene3D:1.20.920.10 SUPFAM:SSF47370 PROSITE:PS00633 CTD:29028
HOVERGEN:HBG080873 ChiTaRS:ATAD2 EMBL:AK029867 EMBL:AK134319
IPI:IPI00135252 IPI:IPI00228860 RefSeq:NP_081711.2
UniGene:Mm.221758 ProteinModelPortal:Q8CDM1 SMR:Q8CDM1
IntAct:Q8CDM1 STRING:Q8CDM1 PhosphoSite:Q8CDM1 PRIDE:Q8CDM1
GeneID:70472 KEGG:mmu:70472 UCSC:uc007vtf.1 UCSC:uc007vtg.1
HOGENOM:HOG000034119 InParanoid:Q3UYW6 NextBio:331701
CleanEx:MM_ATAD2 Genevestigator:Q8CDM1
GermOnline:ENSMUSG00000022360 Uniprot:Q8CDM1
Length = 1040
Score = 991 (353.9 bits), Expect = 1.1e-103, Sum P(2) = 1.1e-103
Identities = 187/314 (59%), Positives = 237/314 (75%)
Query: 365 ADIQPLQVDESVSFDDIGGLSEYIDALKEMVFFPLLYPDFFASYHITPPRGVLLCGPPGT 424
AD+ P+Q+D SV FD +GGLS +I ALKEMV FPLLYP+ F + I PPRG L GPPGT
Sbjct: 67 ADVDPMQLDTSVRFDSVGGLSSHIAALKEMVVFPLLYPEVFEKFKIQPPRGCLFYGPPGT 126
Query: 425 GKTLIARALACAASKAGQKVSFYMRKGADVLSKWVGEAERQLKLLFEEAQRNQPSIIFFD 484
GKTL+ARALA S+ ++V+F+MRKGAD LSKWVGE+ERQL+LLF++A + +P+IIFFD
Sbjct: 127 GKTLVARALANECSRGDKRVAFFMRKGADCLSKWVGESERQLRLLFDQAYQMRPAIIFFD 186
Query: 485 EIDGLAPVRSSKQEQIHNSIVSTLLALMDGLDSRGQVVLIGATNRVDAIDGALRRPGRFD 544
EIDGLAPVRSS+Q+QIH+SIVSTLLALMDGLDSRG++V+IGATNR+D+ID ALRRPGRFD
Sbjct: 187 EIDGLAPVRSSRQDQIHSSIVSTLLALMDGLDSRGEIVVIGATNRLDSIDPALRRPGRFD 246
Query: 545 REFNFPLPGCEARAEILDIHTRKWKQPPSRELKSELAASCVGYCGADLKALCTEAAIRAF 604
REF F LP AR EIL IHTR W P ELA CVGYCGAD+K++C EAA+ A
Sbjct: 247 REFLFSLPDKNARKEILKIHTRDWNPKPVDMFLEELAEHCVGYCGADIKSICAEAALCAL 306
Query: 605 REKYPQVYTSDDKFLIDVDSVTVEKYHFIEAMSTITPAAHRGATVHSRPLSLVVAPCLQR 664
R +YPQ+YT+ +K +D+ S+T+ F A+ I PA+ R T + LS +V P LQ
Sbjct: 307 RRRYPQIYTTSEKLQLDLSSITISAKDFEAALQKIRPASQRAVTSPGQALSAIVKPLLQN 366
Query: 665 HLQKAMNYISDIFP 678
+ + ++ + +FP
Sbjct: 367 TVHRILDALQKVFP 380
Score = 455 (165.2 bits), Expect = 3.8e-40, Sum P(2) = 3.8e-40
Identities = 115/380 (30%), Positives = 187/380 (49%)
Query: 598 EAAIRAFREKYPQVYTSDDKFLIDVDSVTVEK--YHFIEAMSTITPAAHRGATVHSRPLS 655
EAA++ R + TS + L + ++ + ++A+ + P G S
Sbjct: 335 EAALQKIRPASQRAVTSPGQALSAIVKPLLQNTVHRILDALQKVFPHVEVGTNKSLN--S 392
Query: 656 LVVAPCLQRHLQKAMNYISDIFPP-LGMSSELTKLCMLSHGSAIPLVYRPRLLLCGSEGT 714
V P L+ L + + ++ L L L + + P+ +RPRLL+ G G
Sbjct: 393 DVSCPFLESDLAYSDDDTPSVYENGLSQKENLNFLHLNRNACYQPMSFRPRLLIVGEPGF 452
Query: 715 GVD-HLGPAILHELEKFPVHSLGLPALLSDPSAKTPEEALVHIFGEARRTTPSILYIPQF 773
G HL PA++H LEKF V++L +P L S +PEEA + EA+RT PSI+Y+P
Sbjct: 453 GQSSHLAPAVIHALEKFTVYTLDIPVLFGI-STTSPEEACSQMIREAKRTAPSIVYVPHI 511
Query: 774 NLWWENAHXXXXXXXXXXXXXXXXXXPILLLGSSSVPLAEVEGDPSTVFP--LRSVYQVE 831
+LWWE P+LLL +S P + + + +F ++ V+
Sbjct: 512 HLWWEIVGPTLKATFTTLLQTIPSFAPVLLLATSEKPYSALPEEVQELFTHDYGEIFNVQ 571
Query: 832 KPSTEDRSLFLGRLIEAAVSVVLEGRSKKPQESVSLPELPKVPTVESGP-KASELKAKVE 890
P E+R+ F LI S + K +++ + LP P E P A E+K E
Sbjct: 572 LPDKEERTKFFEDLILKQASKPPVSQKKAVLQALEV--LPVAPPPEPRPLTAEEVKRLEE 629
Query: 891 AEQHALRRLRMCLRDVCNRMLYDKRFSAFHYPVTDEDAPNYRSIIQNPMDLATLLQRVDS 950
E+ R LR+ LR+V +R+ DKRF F PV ++ P+Y ++I+ PMDL++++ ++D
Sbjct: 630 QEEDTFRELRIFLRNVTHRLAIDKRFRVFTKPVDPDEVPDYVTVIKQPMDLSSVISKIDL 689
Query: 951 GHYVTCSAFLQDVDLIVTNA 970
Y+T +L+D+DLI +NA
Sbjct: 690 HKYLTVKDYLKDIDLICSNA 709
Score = 56 (24.8 bits), Expect = 1.1e-103, Sum P(2) = 1.1e-103
Identities = 18/49 (36%), Positives = 26/49 (53%)
Query: 84 RKRRISVNLEDYTDSSGSEDEDLMRPSYRPLRNRMRN-----NMSQDEL 127
+ RR +++ D T SS SED+ R + R RNR N N +DE+
Sbjct: 5 KMRRHAIHSSDSTSSSSSEDDCFERRTKRN-RNRAINRCLPLNFRKDEI 52
>TAIR|locus:2083681 [details] [associations]
symbol:AT3G15120 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005886 "plasma membrane" evidence=ISM]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0009506
"plasmodesma" evidence=IDA] [GO:0000226 "microtubule cytoskeleton
organization" evidence=RCA] [GO:0000911 "cytokinesis by cell plate
formation" evidence=RCA] [GO:0009887 "organ morphogenesis"
evidence=RCA] [GO:0009888 "tissue development" evidence=RCA]
[GO:0010638 "positive regulation of organelle organization"
evidence=RCA] [GO:0033044 "regulation of chromosome organization"
evidence=RCA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0009506 GO:GO:0005524 EMBL:CP002686 GO:GO:0017111
IPI:IPI00537350 RefSeq:NP_188130.1 UniGene:At.39103 PRIDE:F4IXH3
EnsemblPlants:AT3G15120.1 GeneID:820743 KEGG:ath:AT3G15120
OMA:LLGPIND Uniprot:F4IXH3
Length = 1954
Score = 730 (262.0 bits), Expect = 2.3e-78, Sum P(3) = 2.3e-78
Identities = 166/364 (45%), Positives = 226/364 (62%)
Query: 323 LEM--HGTTAWGLNVAASG-W----GHQGDTLAA----LTSGIQTAGPSSKGGADIQPLQ 371
LEM H AW +V A W G + L L + P GG+D + +
Sbjct: 654 LEMKKHSNDAWRKDVEAEEKWFEKCGEDEEFLKRESKRLHRDLLRVAPEYIGGSDSESGK 713
Query: 372 VDESVSFDDIGGLSEYIDALKEMVFFPLLYPDFFASYHITPPRGVLLCGPPGTGKTLIAR 431
E +D + GL +KE+V PLLYP+FF + +TPPRG+LL G PGTGKTL+ R
Sbjct: 714 AFEG--WDSVAGLEGVTQCMKEVVLIPLLYPEFFDNLGLTPPRGILLHGHPGTGKTLVVR 771
Query: 432 ALACAASKAGQKVSFYMRKGADVLSKWVGEAERQLKLLFEEAQRNQPSIIFFDEIDGLAP 491
AL + ++ ++++++ RKGAD L K+VG+AERQL+LLF+ A++ QPSIIFFDEIDGLAP
Sbjct: 772 ALIGSLARGNRRIAYFARKGADCLGKYVGDAERQLRLLFQVAEKCQPSIIFFDEIDGLAP 831
Query: 492 VRSSKQEQIHNSIVSTLLALMDGLDSRGQVVLIGATNRVDAIDGALRRPGRFDREFNFPL 551
RS +Q+Q H+S+VSTLLAL+DGL SRG VV+IGATN DAID ALRRPGRFDRE FPL
Sbjct: 832 KRSRQQDQTHSSVVSTLLALLDGLKSRGSVVVIGATNYPDAIDPALRRPGRFDREIYFPL 891
Query: 552 PGCEARAEILDIHTRKWKQPPSRELKSELAASCVGYCGADLKALCTEAAIRAFREKYP-Q 610
P + RA I+ +HTRKW +P S L +A G+ GAD++ALCT+AA+ A +P Q
Sbjct: 892 PSVDDRAAIISLHTRKWPKPVSGYLLKWIAKETAGFAGADIQALCTQAAMIALNRSFPLQ 951
Query: 611 VYTSDDKFLID------VDSVTVEKYHFIEAMS-TITPAAHRGA-----TVHSRPLSLVV 658
+ + + + S +VE+ ++EA+S + P + RGA + S PL +
Sbjct: 952 ESLAAAELGVSSSNRAALPSFSVEERDWLEALSRSPPPCSRRGAGIAASDIFSSPLPTYL 1011
Query: 659 APCL 662
P L
Sbjct: 1012 VPSL 1015
Score = 85 (35.0 bits), Expect = 2.3e-78, Sum P(3) = 2.3e-78
Identities = 52/273 (19%), Positives = 107/273 (39%)
Query: 4 KRSGQGDGSVPGPVRTSDRLRRRPKILGRTYLYYNPIRPRKSKTKARTAASQIARMFGPG 63
KR+ GD P ++ R RR+ + + + K K R A +++
Sbjct: 91 KRNEDGDSDAPDGWKSRLRSRRKKNVGFQASGRQRRVVKGKRKLVFRNRACELSEK---A 147
Query: 64 KRTVRTSNKNSVPLNLRRSTRKRRISVNLEDYTDSSGSEDEDLMRPSYRPLRNRMRNNMS 123
+ + R K ++ + + K+ + V + ++ G E + + ++ + S
Sbjct: 148 EASDREEEKGALKGG-KLNKAKKPVDVKESESSEDGGKESDT---SNSEDVQKESDTSNS 203
Query: 124 QDELSPSKRKKVVEAKPTPRREGLRPRRSMVATRKQLNLDSGDEQGSSEEKVGQDETENG 183
+DE S S+ ++ ++A + RE + ++ AT++ + L+S +E +E + E+E+G
Sbjct: 204 EDE-SASESEESMQAD-SAAREKYQEKK---ATKRSVFLESENE---AEVDRTETESEDG 255
Query: 184 NES-DNDADDGQNEIXXXXXXXXXXXXXXXXXXXXXXXXXXXXQEGRRRYDLRNRAEVRR 242
+S DN+ DD E + + RN+ E
Sbjct: 256 TDSTDNEIDDSDEEGESETQCSAEKTGSETEANVEEMRADTNVTMEAVQNESRNQMEELE 315
Query: 243 LSVEEGKQRPRSPRRVL--HQGIGTKVGRDVRK 273
+E G + + V+ G GT + D K
Sbjct: 316 NEIEMGVEDEKKEMSVIVSESGNGTGIREDENK 348
Score = 55 (24.4 bits), Expect = 3.3e-75, Sum P(3) = 3.3e-75
Identities = 43/193 (22%), Positives = 72/193 (37%)
Query: 7 GQGDGSVPGPVRTSDRLRRRPKILGRTYLYYNPIRPRKSKTKARTAASQIARMFGPGKRT 66
G G +R S R+R+ P IL + P P+K + + ++S I + GKR
Sbjct: 44 GSGLACADSELRRSSRVRKIPSILDAS-----PPPPKK-RQRFNKSSSSIEK----GKRN 93
Query: 67 VRTSNKNSVPLNLR-RSTRKRRISVNLEDYTDSSGSEDEDLM-RPSYRPLRNRMRNNMSQ 124
+ R RS RK+ + L+ R L + + +
Sbjct: 94 EDGDSDAPDGWKSRLRSRRKKNVGFQASGRQRRVVKGKRKLVFRNRACELSEKAEASDRE 153
Query: 125 DELSPSKRKKVVEAK-PTPRREGLRPRRSMVATRKQLNLDSGDEQGSSEEKVGQDETENG 183
+E K K+ +AK P +E S ++ +S D Q S+ +DE+ +
Sbjct: 154 EEKGALKGGKLNKAKKPVDVKES---ESSEDGGKESDTSNSEDVQKESDTSNSEDESASE 210
Query: 184 NESDNDADDGQNE 196
+E AD E
Sbjct: 211 SEESMQADSAARE 223
Score = 53 (23.7 bits), Expect = 5.3e-75, Sum P(3) = 5.3e-75
Identities = 35/161 (21%), Positives = 65/161 (40%)
Query: 43 RKSKTKARTAASQIARMFGPGKRTVRTSNKNSVPLNLRRSTRKRRISVNLEDYTDSSGSE 102
+KSK A + + G + S LRRS+R R+I ++ D + +
Sbjct: 18 KKSKKLAAICEEEYKKNHGESQDRDGGSGLACADSELRRSSRVRKIP-SILDASPPPPKK 76
Query: 103 DEDLMRPSY---RPLRNRMRNNMSQDELSP---SKRKKVVEAKPTPR-REGLRPRRSMVA 155
+ + S + RN ++ + D S+RKK V + + R R ++ +R +V
Sbjct: 77 RQRFNKSSSSIEKGKRNEDGDSDAPDGWKSRLRSRRKKNVGFQASGRQRRVVKGKRKLVF 136
Query: 156 TRKQLNLDSGDEQGSSEEKVGQDETENGNESDNDADDGQNE 196
+ L E EE+ G + N++ D ++E
Sbjct: 137 RNRACELSEKAEASDREEEKGALKGGKLNKAKKPVDVKESE 177
Score = 53 (23.7 bits), Expect = 5.3e-75, Sum P(3) = 5.3e-75
Identities = 42/200 (21%), Positives = 74/200 (37%)
Query: 2 YSKRSGQG---DGSVPGPVRTSDRLRRRPKILG-RTYLYYNPIRPRKSKTKARTAASQIA 57
Y K G+ DG G LRR ++ + L +P P+K + + ++S I
Sbjct: 31 YKKNHGESQDRDGG-SGLACADSELRRSSRVRKIPSILDASPPPPKK-RQRFNKSSSSIE 88
Query: 58 RMFGPGKRTVRTSNKNSVPLNLRRSTRKRRISVNLEDYTDSSGSEDEDLMRPSYRPLRNR 117
+ GKR + P + R RR N+ +SG + + RNR
Sbjct: 89 K----GKRN--EDGDSDAPDGWKSRLRSRR-KKNVG--FQASGRQRRVVKGKRKLVFRNR 139
Query: 118 MRNNMSQDELSPSKRKKVVEAKPTPRREGLRPRRSMVATRKQLNLDSGDEQGSSEEKVGQ 177
+ E S + +K K + +P + + + D G E +S + Q
Sbjct: 140 ACELSEKAEASDREEEKGA-LKGGKLNKAKKP---VDVKESESSEDGGKESDTSNSEDVQ 195
Query: 178 DETENGNESDNDADDGQNEI 197
E++ N D A + + +
Sbjct: 196 KESDTSNSEDESASESEESM 215
Score = 46 (21.3 bits), Expect = 2.3e-78, Sum P(3) = 2.3e-78
Identities = 15/76 (19%), Positives = 31/76 (40%)
Query: 705 RLLLCGSEGTGVDHLGPAILH----ELEKFPVHSLGLPALLSDPSAKTPEEALVHIFGEA 760
+LL+ G +G HL +LH E + + A +S + H+ +
Sbjct: 1142 QLLIAGGPKSGQRHLASCVLHCFIGNAEMLKIDT----ATISQEGNGDLVLGVTHLLIKC 1197
Query: 761 RRTTPSILYIPQFNLW 776
++++P+ +LW
Sbjct: 1198 ASKKSCVVFMPRVDLW 1213
>UNIPROTKB|F1NUE7 [details] [associations]
symbol:F1NUE7 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0017111 GeneTree:ENSGT00550000074694 OMA:WNISAGQ
EMBL:AADN02018482 IPI:IPI00579829 Ensembl:ENSGALT00000026612
Uniprot:F1NUE7
Length = 487
Score = 703 (252.5 bits), Expect = 2.4e-75, Sum P(3) = 2.4e-75
Identities = 136/188 (72%), Positives = 161/188 (85%)
Query: 365 ADIQPLQVDESVSFDDIGGLSEYIDALKEMVFFPLLYPDFFASYHITPPRGVLLCGPPGT 424
AD+ P+ VD+SV FD IGGLS +I ALKEMV FPLLYP+ F + I PPRG L GPPGT
Sbjct: 299 ADVDPMIVDKSVRFDSIGGLSHHILALKEMVVFPLLYPEIFEKFKIQPPRGCLFYGPPGT 358
Query: 425 GKTLIARALACAASKAGQKVSFYMRKGADVLSKWVGEAERQLKLLFEEAQRNQPSIIFFD 484
GKTL+ARALA S+ +KV+F+MRKGAD LSKWVGE+ERQL+LLF++A +PSIIFFD
Sbjct: 359 GKTLVARALANECSQGDKKVAFFMRKGADCLSKWVGESERQLRLLFDQAYLMRPSIIFFD 418
Query: 485 EIDGLAPVRSSKQEQIHNSIVSTLLALMDGLDSRGQVVLIGATNRVDAIDGALRRPGRFD 544
EIDGLAPVRSS+Q+QIH+SIVSTLLALMDGLD+RG++V+IGATNR+D+ID ALRRPGRFD
Sbjct: 419 EIDGLAPVRSSRQDQIHSSIVSTLLALMDGLDNRGEIVVIGATNRLDSIDPALRRPGRFD 478
Query: 545 REFNFPLP 552
REF F LP
Sbjct: 479 REFLFNLP 486
Score = 51 (23.0 bits), Expect = 2.4e-75, Sum P(3) = 2.4e-75
Identities = 14/47 (29%), Positives = 23/47 (48%)
Query: 143 RREGLRPRRSMVATRKQLNLDSGDEQGSSEEKVGQDETENGNESDND 189
RR+ LR + +++ + G+E+ S EE G E E +ND
Sbjct: 150 RRKSLRRNSYGIQNHHEVSTE-GEEEESQEED-GDIEAEEAEGEEND 194
Score = 43 (20.2 bits), Expect = 6.0e-72, Sum P(2) = 6.0e-72
Identities = 25/105 (23%), Positives = 40/105 (38%)
Query: 78 NLRRSTR--KRRISVNLEDYTDSSGSEDEDLMRPSYRPLRNRMRNNMSQDE-LSPSKRKK 134
+LRR++ + V+ E + S ED D+ N N+ Q + + +
Sbjct: 153 SLRRNSYGIQNHHEVSTEGEEEESQEEDGDIEAEEAEGEENDRPYNLRQRKTVERYQAPP 212
Query: 135 VVEAKPTPRREGL-----RPRRSMVATRKQLNLDSGDEQGSSEEK 174
+V A R L P R RK+ + S D S EE+
Sbjct: 213 IVPAHQKKRENTLFDIHRSPARRSHIRRKKHAIHSSDTTSSDEER 257
Score = 41 (19.5 bits), Expect = 9.7e-72, Sum P(2) = 9.7e-72
Identities = 26/101 (25%), Positives = 41/101 (40%)
Query: 39 PIRPRKSKTKARTAASQIARMFGPGKRTVRTSNKNSVPLN-LRRS-TRKRRISVNLEDYT 96
P R+ KT R A I P + R + + + RRS R+++ +++ D T
Sbjct: 196 PYNLRQRKTVERYQAPPIV----PAHQKKRENTLFDIHRSPARRSHIRRKKHAIHSSDTT 251
Query: 97 DSSGSEDEDLMRPSYRPLRNRMR--NNMSQDELSPSKRKKV 135
S E S RNR N ++D S R++V
Sbjct: 252 SSDEERFERRKSKSMARARNRCLPLNFRAEDLASGILRERV 292
Score = 37 (18.1 bits), Expect = 2.4e-75, Sum P(3) = 2.4e-75
Identities = 8/17 (47%), Positives = 10/17 (58%)
Query: 226 QEGRRRYDLRNRAEVRR 242
+E R Y+LR R V R
Sbjct: 191 EENDRPYNLRQRKTVER 207
>UNIPROTKB|D4A9R0 [details] [associations]
symbol:LOC500625 "Protein LOC500625" species:10116 "Rattus
norvegicus" [GO:0005524 "ATP binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0017111 GeneTree:ENSGT00550000074694 IPI:IPI00471839
Ensembl:ENSRNOT00000052041 RGD:1566199 ArrayExpress:D4A9R0
Uniprot:D4A9R0
Length = 419
Score = 708 (254.3 bits), Expect = 1.2e-73, Sum P(2) = 1.2e-73
Identities = 135/188 (71%), Positives = 161/188 (85%)
Query: 365 ADIQPLQVDESVSFDDIGGLSEYIDALKEMVFFPLLYPDFFASYHITPPRGVLLCGPPGT 424
AD+ P+ +D+SV FD IGGLS +I ALKEMV FPLLYP+ F + I PPRG L GPPGT
Sbjct: 225 ADVDPMNIDKSVRFDSIGGLSHHIHALKEMVVFPLLYPEIFEKFKIQPPRGCLFYGPPGT 284
Query: 425 GKTLIARALACAASKAGQKVSFYMRKGADVLSKWVGEAERQLKLLFEEAQRNQPSIIFFD 484
GKTL+ARALA S+ +KV+F+MRKGAD LSKWVGE+ERQL+LLF++A +PSIIFFD
Sbjct: 285 GKTLVARALANECSQGDKKVAFFMRKGADCLSKWVGESERQLRLLFDQAYLMRPSIIFFD 344
Query: 485 EIDGLAPVRSSKQEQIHNSIVSTLLALMDGLDSRGQVVLIGATNRVDAIDGALRRPGRFD 544
EIDGLAPVRSS+Q+QIH+SIVSTLLALMDGLD+RG++V+IGATNR+D+ID ALRRPGRFD
Sbjct: 345 EIDGLAPVRSSRQDQIHSSIVSTLLALMDGLDNRGEIVVIGATNRLDSIDPALRRPGRFD 404
Query: 545 REFNFPLP 552
REF F LP
Sbjct: 405 REFLFNLP 412
Score = 54 (24.1 bits), Expect = 1.2e-73, Sum P(2) = 1.2e-73
Identities = 16/68 (23%), Positives = 34/68 (50%)
Query: 123 SQDELSPSKRKKV-VEAKPTPRREGLRPRRSMVATRKQLNLDSGDEQGSSEEKVGQDETE 181
++ +SP+ + + + ++ RR+ LR + +++ + G+E+ S EE G E E
Sbjct: 55 AKTSISPTPSENMDMYSRVKRRRKSLRRNSYGIQNHHEVSTE-GEEEESQEED-GDIEVE 112
Query: 182 NGNESDND 189
+ND
Sbjct: 113 EAEGEEND 120
Score = 47 (21.6 bits), Expect = 6.7e-73, Sum P(2) = 6.7e-73
Identities = 35/134 (26%), Positives = 53/134 (39%)
Query: 45 SKTKARTAASQIARMFGPGKRTVRTSNKNSVPLNLRR--STRKRRISVNLEDYT-DSSGS 101
+KT S+ M+ KR ++ +NS + ST ED + +
Sbjct: 55 AKTSISPTPSENMDMYSRVKRRRKSLRRNSYGIQNHHEVSTEGEEEESQEEDGDIEVEEA 114
Query: 102 EDEDLMRPSYRPLRNRMRNNMSQ-DELSPSKRKKVVEAKPTPRREGLRPRRSMVATRKQL 160
E E+ RP Y LR R + Q + P+ +KK R R RS + RK+
Sbjct: 115 EGEENDRP-YN-LRQRKTVDRYQAPPIVPAHQKKRENTLFDIHRSPAR--RSHIR-RKKH 169
Query: 161 NLDSGDEQGSSEEK 174
+ S D S EE+
Sbjct: 170 AIHSSDTTSSDEER 183
Score = 41 (19.5 bits), Expect = 2.9e-72, Sum P(2) = 2.9e-72
Identities = 26/101 (25%), Positives = 41/101 (40%)
Query: 39 PIRPRKSKTKARTAASQIARMFGPGKRTVRTSNKNSVPLN-LRRS-TRKRRISVNLEDYT 96
P R+ KT R A I P + R + + + RRS R+++ +++ D T
Sbjct: 122 PYNLRQRKTVDRYQAPPIV----PAHQKKRENTLFDIHRSPARRSHIRRKKHAIHSSDTT 177
Query: 97 DSSGSEDEDLMRPSYRPLRNRM--RNNMSQDELSPSKRKKV 135
S E S RNR N ++D S R++V
Sbjct: 178 SSDEERFERRKSKSMARARNRCLPMNFRAEDLASGILRERV 218
>WB|WBGene00007352 [details] [associations]
symbol:cdc-48.1 species:6239 "Caenorhabditis elegans"
[GO:0016887 "ATPase activity" evidence=IEA;IDA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA] [GO:0006310
"DNA recombination" evidence=IEA] [GO:0009378 "four-way junction
helicase activity" evidence=IEA] [GO:0009792 "embryo development
ending in birth or egg hatching" evidence=IGI;IMP] [GO:0040002
"collagen and cuticulin-based cuticle development" evidence=IMP]
[GO:0002119 "nematode larval development" evidence=IMP] [GO:0040018
"positive regulation of multicellular organism growth"
evidence=IMP] [GO:0040011 "locomotion" evidence=IMP] [GO:0000003
"reproduction" evidence=IMP] [GO:0051301 "cell division"
evidence=IMP] [GO:0000910 "cytokinesis" evidence=IMP] [GO:0007126
"meiosis" evidence=IMP] [GO:0030968 "endoplasmic reticulum unfolded
protein response" evidence=IMP] [GO:0071712 "ER-associated
misfolded protein catabolic process" evidence=IGI] [GO:0034098
"Cdc48p-Npl4p-Ufd1p AAA ATPase complex" evidence=IPI] [GO:0005634
"nucleus" evidence=IDA] [GO:0006200 "ATP catabolic process"
evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 InterPro:IPR003338 Pfam:PF02359 GO:GO:0005524
GO:GO:0005634 GO:GO:0009792 GO:GO:0007126 GO:GO:0002119
GO:GO:0040011 GO:GO:0040018 GO:GO:0016887 GO:GO:0000910
eggNOG:COG0464 Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
InterPro:IPR015415 Pfam:PF09336 GO:GO:0030968 GO:GO:0040002
HOGENOM:HOG000223224 KO:K13525 OMA:QIANECH InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 GO:GO:0034098 GeneTree:ENSGT00700000104534
GO:GO:0071712 EMBL:Z49886 PIR:T18970 RefSeq:NP_496273.1
ProteinModelPortal:P54811 SMR:P54811 DIP:DIP-26650N IntAct:P54811
MINT:MINT-1061999 STRING:P54811 PaxDb:P54811 PRIDE:P54811
EnsemblMetazoa:C06A1.1.1 EnsemblMetazoa:C06A1.1.2 GeneID:174624
KEGG:cel:CELE_C06A1.1 UCSC:C06A1.1.1 CTD:174624 WormBase:C06A1.1
InParanoid:P54811 NextBio:884814 Uniprot:P54811
Length = 809
Score = 599 (215.9 bits), Expect = 6.8e-58, P = 6.8e-58
Identities = 159/421 (37%), Positives = 234/421 (55%)
Query: 364 GADIQPLQVDES---VSFDDIGGLSEYIDALKEMVFFPLLYPDFFASYHITPPRGVLLCG 420
G I+ + +ES + +DD+GG+ + + +KEMV PL +P F + I PPRG+LL G
Sbjct: 192 GDPIKREEEEESMNDIGYDDLGGVRKQLAQIKEMVELPLRHPQLFKAIGIKPPRGILLFG 251
Query: 421 PPGTGKTLIARALACAASKAGQKVSFYMRKGADVLSKWVGEAERQLKLLFEEAQRNQPSI 480
PPGTGKTLIARA+A ++ G F++ G +V+SK GE+E L+ FEE ++NQP+I
Sbjct: 252 PPGTGKTLIARAVA---NETGS--FFFLINGPEVMSKMSGESESNLRKAFEECEKNQPAI 306
Query: 481 IFFDEIDGLAPVRSSKQEQIHNSIVSTLLALMDGLDSRGQVVLIGATNRVDAIDGALRRP 540
+F DEID +AP R ++ IVS LL LMDG+ R +V+I ATNR ++IDGALRR
Sbjct: 307 LFIDEIDAIAPKREKTNGEVERRIVSQLLTLMDGVKGRSNLVVIAATNRPNSIDGALRRF 366
Query: 541 GRFDREFNFPLPGCEARAEILDIHTRKWKQPPSRELKSELAASCVGYCGADLKALCTEAA 600
GRFDRE + +P R EIL IHT+ K +L+ ++A C G+ GADL +LC+EAA
Sbjct: 367 GRFDREIDIGIPDAVGRLEILRIHTKNMKLADDVDLE-QIANECHGFVGADLASLCSEAA 425
Query: 601 IRAFREKYPQVYTSDDKFLIDV-DS--VTVEKYHFIEAMSTITPAAHRGATVHSRPLSLV 657
++ REK + DD+ +V +S VT+E + F + S+ P+A R A V + +
Sbjct: 426 LQQIREKMELIDLEDDQIDAEVLNSLAVTMENFRFAQGKSS--PSALREAVVETPNTTWS 483
Query: 658 VAPCLQ---RHLQKAMNYISDIFPPLGMSSELTKLCML-SHGSAIPLVYRPRLLLCGSEG 713
LQ R LQ+ + Y P+ + K M S G +L G G
Sbjct: 484 DIGGLQNVKRELQELVQY------PVEHPEKYLKFGMQPSRG----------VLFYGPPG 527
Query: 714 TGVDHLGPAILHELEKFPVHSLGLPALLSDPSAKTPEEALVHIFGEARRTTPSILYIPQF 773
G L AI +E + + G P LL+ ++ E + +F +AR P +L+ +
Sbjct: 528 CGKTLLAKAIANECQANFISIKG-PELLTMWFGES-EANVRDVFDKARAAAPCVLFFDEL 585
Query: 774 N 774
+
Sbjct: 586 D 586
Score = 392 (143.0 bits), Expect = 6.6e-33, P = 6.6e-33
Identities = 93/267 (34%), Positives = 149/267 (55%)
Query: 345 DTLAALTSGIQTAGPSSKGGADIQPLQVDESVSFDDIGGLSEYIDALKEMVFFPLLYPDF 404
++LA + A S A + + + ++ DIGGL L+E+V +P+ +P+
Sbjct: 449 NSLAVTMENFRFAQGKSSPSALREAVVETPNTTWSDIGGLQNVKRELQELVQYPVEHPEK 508
Query: 405 FASYHITPPRGVLLCGPPGTGKTLIARALACAASKAGQKVSFYMRKGADVLSKWVGEAER 464
+ + + P RGVL GPPG GKTL+A+A+A + +F KG ++L+ W GE+E
Sbjct: 509 YLKFGMQPSRGVLFYGPPGCGKTLLAKAIANEC-----QANFISIKGPELLTMWFGESEA 563
Query: 465 QLKLLFEEAQRNQPSIIFFDEIDGLAPVRSSKQEQ----IHNSIVSTLLALMDGLDSRGQ 520
++ +F++A+ P ++FFDE+D +A R + +++ +L MDG++++
Sbjct: 564 NVRDVFDKARAAAPCVLFFDELDSIAKARGGGAGGDGGGASDRVINQVLTEMDGMNAKKN 623
Query: 521 VVLIGATNRVDAIDGALRRPGRFDREFNFPLPGCEARAEILDIHTRKWKQPPSRELK-SE 579
V +IGATNR D ID A+ RPGR D+ PLP +R +IL RK P S++L +
Sbjct: 624 VFIIGATNRPDIIDPAVLRPGRLDQLIYIPLPDEASRHQILKASLRK--TPLSKDLDLTF 681
Query: 580 LAASCVGYCGADLKALCTEAAIRAFRE 606
LA + VG+ GADL +C A A RE
Sbjct: 682 LAKNTVGFSGADLTEICQRACKLAIRE 708
>UNIPROTKB|P54811 [details] [associations]
symbol:cdc-48.1 "Transitional endoplasmic reticulum ATPase
homolog 1" species:6239 "Caenorhabditis elegans" [GO:0005515
"protein binding" evidence=IPI] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005938
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 InterPro:IPR003338
Pfam:PF02359 GO:GO:0005524 GO:GO:0005634 GO:GO:0009792
GO:GO:0007126 GO:GO:0002119 GO:GO:0040011 GO:GO:0040018
GO:GO:0016887 GO:GO:0000910 eggNOG:COG0464 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 InterPro:IPR015415 Pfam:PF09336
GO:GO:0030968 GO:GO:0040002 HOGENOM:HOG000223224 KO:K13525
OMA:QIANECH InterPro:IPR004201 PANTHER:PTHR23077:SF18 Pfam:PF02933
SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243 GO:GO:0034098
GeneTree:ENSGT00700000104534 GO:GO:0071712 EMBL:Z49886 PIR:T18970
RefSeq:NP_496273.1 ProteinModelPortal:P54811 SMR:P54811
DIP:DIP-26650N IntAct:P54811 MINT:MINT-1061999 STRING:P54811
PaxDb:P54811 PRIDE:P54811 EnsemblMetazoa:C06A1.1.1
EnsemblMetazoa:C06A1.1.2 GeneID:174624 KEGG:cel:CELE_C06A1.1
UCSC:C06A1.1.1 CTD:174624 WormBase:C06A1.1 InParanoid:P54811
NextBio:884814 Uniprot:P54811
Length = 809
Score = 599 (215.9 bits), Expect = 6.8e-58, P = 6.8e-58
Identities = 159/421 (37%), Positives = 234/421 (55%)
Query: 364 GADIQPLQVDES---VSFDDIGGLSEYIDALKEMVFFPLLYPDFFASYHITPPRGVLLCG 420
G I+ + +ES + +DD+GG+ + + +KEMV PL +P F + I PPRG+LL G
Sbjct: 192 GDPIKREEEEESMNDIGYDDLGGVRKQLAQIKEMVELPLRHPQLFKAIGIKPPRGILLFG 251
Query: 421 PPGTGKTLIARALACAASKAGQKVSFYMRKGADVLSKWVGEAERQLKLLFEEAQRNQPSI 480
PPGTGKTLIARA+A ++ G F++ G +V+SK GE+E L+ FEE ++NQP+I
Sbjct: 252 PPGTGKTLIARAVA---NETGS--FFFLINGPEVMSKMSGESESNLRKAFEECEKNQPAI 306
Query: 481 IFFDEIDGLAPVRSSKQEQIHNSIVSTLLALMDGLDSRGQVVLIGATNRVDAIDGALRRP 540
+F DEID +AP R ++ IVS LL LMDG+ R +V+I ATNR ++IDGALRR
Sbjct: 307 LFIDEIDAIAPKREKTNGEVERRIVSQLLTLMDGVKGRSNLVVIAATNRPNSIDGALRRF 366
Query: 541 GRFDREFNFPLPGCEARAEILDIHTRKWKQPPSRELKSELAASCVGYCGADLKALCTEAA 600
GRFDRE + +P R EIL IHT+ K +L+ ++A C G+ GADL +LC+EAA
Sbjct: 367 GRFDREIDIGIPDAVGRLEILRIHTKNMKLADDVDLE-QIANECHGFVGADLASLCSEAA 425
Query: 601 IRAFREKYPQVYTSDDKFLIDV-DS--VTVEKYHFIEAMSTITPAAHRGATVHSRPLSLV 657
++ REK + DD+ +V +S VT+E + F + S+ P+A R A V + +
Sbjct: 426 LQQIREKMELIDLEDDQIDAEVLNSLAVTMENFRFAQGKSS--PSALREAVVETPNTTWS 483
Query: 658 VAPCLQ---RHLQKAMNYISDIFPPLGMSSELTKLCML-SHGSAIPLVYRPRLLLCGSEG 713
LQ R LQ+ + Y P+ + K M S G +L G G
Sbjct: 484 DIGGLQNVKRELQELVQY------PVEHPEKYLKFGMQPSRG----------VLFYGPPG 527
Query: 714 TGVDHLGPAILHELEKFPVHSLGLPALLSDPSAKTPEEALVHIFGEARRTTPSILYIPQF 773
G L AI +E + + G P LL+ ++ E + +F +AR P +L+ +
Sbjct: 528 CGKTLLAKAIANECQANFISIKG-PELLTMWFGES-EANVRDVFDKARAAAPCVLFFDEL 585
Query: 774 N 774
+
Sbjct: 586 D 586
Score = 392 (143.0 bits), Expect = 6.6e-33, P = 6.6e-33
Identities = 93/267 (34%), Positives = 149/267 (55%)
Query: 345 DTLAALTSGIQTAGPSSKGGADIQPLQVDESVSFDDIGGLSEYIDALKEMVFFPLLYPDF 404
++LA + A S A + + + ++ DIGGL L+E+V +P+ +P+
Sbjct: 449 NSLAVTMENFRFAQGKSSPSALREAVVETPNTTWSDIGGLQNVKRELQELVQYPVEHPEK 508
Query: 405 FASYHITPPRGVLLCGPPGTGKTLIARALACAASKAGQKVSFYMRKGADVLSKWVGEAER 464
+ + + P RGVL GPPG GKTL+A+A+A + +F KG ++L+ W GE+E
Sbjct: 509 YLKFGMQPSRGVLFYGPPGCGKTLLAKAIANEC-----QANFISIKGPELLTMWFGESEA 563
Query: 465 QLKLLFEEAQRNQPSIIFFDEIDGLAPVRSSKQEQ----IHNSIVSTLLALMDGLDSRGQ 520
++ +F++A+ P ++FFDE+D +A R + +++ +L MDG++++
Sbjct: 564 NVRDVFDKARAAAPCVLFFDELDSIAKARGGGAGGDGGGASDRVINQVLTEMDGMNAKKN 623
Query: 521 VVLIGATNRVDAIDGALRRPGRFDREFNFPLPGCEARAEILDIHTRKWKQPPSRELK-SE 579
V +IGATNR D ID A+ RPGR D+ PLP +R +IL RK P S++L +
Sbjct: 624 VFIIGATNRPDIIDPAVLRPGRLDQLIYIPLPDEASRHQILKASLRK--TPLSKDLDLTF 681
Query: 580 LAASCVGYCGADLKALCTEAAIRAFRE 606
LA + VG+ GADL +C A A RE
Sbjct: 682 LAKNTVGFSGADLTEICQRACKLAIRE 708
>TAIR|locus:2831844 [details] [associations]
symbol:AtCDC48C "cell division cycle 48C" species:3702
"Arabidopsis thaliana" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0005618 "cell wall" evidence=IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005829 "cytosol" evidence=IDA] [GO:0005794
"Golgi apparatus" evidence=IDA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005938
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 InterPro:IPR003338
Pfam:PF02359 GO:GO:0005829 GO:GO:0005524 GO:GO:0005634
GO:GO:0005794 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0005618
EMBL:AL162751 GO:GO:0051301 GO:GO:0005856 GO:GO:0015031
GO:GO:0007049 GO:GO:0017111 Gene3D:2.40.40.20 InterPro:IPR009010
SUPFAM:SSF50692 GO:GO:0009524 UniGene:At.33291 HOGENOM:HOG000223224
KO:K13525 ProtClustDB:CLSN2684913 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 EMBL:AK117125 EMBL:AK118571 EMBL:BT006485
IPI:IPI00543476 RefSeq:NP_568114.1 ProteinModelPortal:Q9LZF6
SMR:Q9LZF6 IntAct:Q9LZF6 STRING:Q9LZF6 PRIDE:Q9LZF6
EnsemblPlants:AT5G03340.1 GeneID:831870 KEGG:ath:AT5G03340
GeneFarm:1899 TAIR:At5g03340 InParanoid:Q9LZF6 OMA:AYRPIHK
PhylomeDB:Q9LZF6 Genevestigator:Q9LZF6 GermOnline:AT5G03340
Uniprot:Q9LZF6
Length = 810
Score = 598 (215.6 bits), Expect = 8.8e-58, P = 8.8e-58
Identities = 154/408 (37%), Positives = 226/408 (55%)
Query: 371 QVDESVSFDDIGGLSEYIDALKEMVFFPLLYPDFFASYHITPPRGVLLCGPPGTGKTLIA 430
++DE V +DD+GG+ + + ++E+V PL +P F S + PP+G+LL GPPG+GKTLIA
Sbjct: 200 RLDE-VGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGSGKTLIA 258
Query: 431 RALACAASKAGQKVSFYMRKGADVLSKWVGEAERQLKLLFEEAQRNQPSIIFFDEIDGLA 490
RA+A ++ G F+ G +++SK GE+E L+ FEEA++N PSIIF DEID +A
Sbjct: 259 RAVA---NETG--AFFFCINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEIDSIA 313
Query: 491 PVRSSKQEQIHNSIVSTLLALMDGLDSRGQVVLIGATNRVDAIDGALRRPGRFDREFNFP 550
P R ++ IVS LL LMDGL SR V+++GATNR ++ID ALRR GRFDRE +
Sbjct: 314 PKREKTNGEVERRIVSQLLTLMDGLKSRAHVIVMGATNRPNSIDPALRRFGRFDREIDIG 373
Query: 551 LPGCEARAEILDIHTRKWKQPPSRELKSELAASCVGYCGADLKALCTEAAIRAFREKYPQ 610
+P R E+L IHT+ K +L+ ++ GY GADL ALCTEAA++ REK
Sbjct: 374 VPDEIGRLEVLRIHTKNMKLAEDVDLE-RISKDTHGYVGADLAALCTEAALQCIREKMDV 432
Query: 611 VYTSDDKFLIDV-DSVTVEKYHFIEAMSTITPAAHRGATVHSRPLSLVVAPCLQ---RHL 666
+ DD ++ +S+ V HF A+ P+A R V +S L+ R L
Sbjct: 433 IDLEDDSIDAEILNSMAVSNEHFHTALGNSNPSALRETVVEVPNVSWEDIGGLENVKREL 492
Query: 667 QKAMNYISDIFPPLGMSSELTKLCMLSHGSAIPLVYRPRLLLCGSEGTGVDHLGPAILHE 726
Q+ + Y P+ + K M S + L Y P G G L AI +E
Sbjct: 493 QETVQY------PVEHPEKFEKFGM-SPSKGV-LFYGP-------PGCGKTLLAKAIANE 537
Query: 727 LEKFPVHSLGLPALLSDPSAKTPEEALVHIFGEARRTTPSILYIPQFN 774
+ + G P LL+ ++ E + IF +AR++ P +L+ + +
Sbjct: 538 CQANFISVKG-PELLTMWFGES-EANVREIFDKARQSAPCVLFFDELD 583
Score = 399 (145.5 bits), Expect = 1.1e-33, P = 1.1e-33
Identities = 92/266 (34%), Positives = 152/266 (57%)
Query: 345 DTLAALTSGIQTAGPSSKGGADIQPLQVDESVSFDDIGGLSEYIDALKEMVFFPLLYPDF 404
+++A TA +S A + + +VS++DIGGL L+E V +P+ +P+
Sbjct: 446 NSMAVSNEHFHTALGNSNPSALRETVVEVPNVSWEDIGGLENVKRELQETVQYPVEHPEK 505
Query: 405 FASYHITPPRGVLLCGPPGTGKTLIARALACAASKAGQKVSFYMRKGADVLSKWVGEAER 464
F + ++P +GVL GPPG GKTL+A+A+A + +F KG ++L+ W GE+E
Sbjct: 506 FEKFGMSPSKGVLFYGPPGCGKTLLAKAIANEC-----QANFISVKGPELLTMWFGESEA 560
Query: 465 QLKLLFEEAQRNQPSIIFFDEIDGLAPVRSSKQEQIHNS---IVSTLLALMDGLDSRGQV 521
++ +F++A+++ P ++FFDE+D +A R + + +++ LL MDG++++ V
Sbjct: 561 NVREIFDKARQSAPCVLFFDELDSIATQRGNSAGDAGGAADRVLNQLLTEMDGMNAKKTV 620
Query: 522 VLIGATNRVDAIDGALRRPGRFDREFNFPLPGCEARAEILDIHTRKWKQPPSRELK-SEL 580
+IGATNR D ID AL RPGR D+ PLP ++R I RK P ++++ + L
Sbjct: 621 FIIGATNRPDIIDSALLRPGRLDQLIYIPLPDEDSRLNIFKACLRK--SPVAKDVDVTAL 678
Query: 581 AASCVGYCGADLKALCTEAAIRAFRE 606
A G+ GAD+ +C A A RE
Sbjct: 679 AKYTQGFSGADITEICQRACKYAIRE 704
>DICTYBASE|DDB_G0288065 [details] [associations]
symbol:cdcD "CDC48 family AAA ATPase" species:44689
"Dictyostelium discoideum" [GO:0005615 "extracellular space"
evidence=IDA] [GO:0045335 "phagocytic vesicle" evidence=IDA]
[GO:0009617 "response to bacterium" evidence=IEP] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0030433 "ER-associated protein catabolic process" evidence=ISS]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0007049 "cell
cycle" evidence=ISS] [GO:0006511 "ubiquitin-dependent protein
catabolic process" evidence=ISS] [GO:0006200 "ATP catabolic
process" evidence=ISS] [GO:0005829 "cytosol" evidence=ISS]
[GO:0051301 "cell division" evidence=IEA] [GO:0044351
"macropinocytosis" evidence=RCA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005938
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 InterPro:IPR003338
dictyBase:DDB_G0288065 Pfam:PF02359 GO:GO:0005829 GO:GO:0005524
GO:GO:0005615 GO:GO:0045335 GO:GO:0009617 GO:GO:0051301
GenomeReviews:CM000154_GR GO:GO:0016887 GO:GO:0007049 GO:GO:0030433
HSSP:Q01853 eggNOG:COG0464 Gene3D:2.40.40.20 InterPro:IPR009010
SUPFAM:SSF50692 EMBL:AAFI02000109 InterPro:IPR015415 Pfam:PF09336
KO:K13525 InterPro:IPR004201 PANTHER:PTHR23077:SF18 Pfam:PF02933
SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243 OMA:AYRPIHK
ProtClustDB:CLSZ2429060 EMBL:U83085 RefSeq:XP_636910.1
ProteinModelPortal:P90532 SMR:P90532 STRING:P90532 PRIDE:P90532
EnsemblProtists:DDB0191154 GeneID:8626465 KEGG:ddi:DDB_G0288065
InParanoid:P90532 Uniprot:P90532
Length = 793
Score = 595 (214.5 bits), Expect = 1.9e-57, P = 1.9e-57
Identities = 151/410 (36%), Positives = 233/410 (56%)
Query: 371 QVDESVSFDDIGGLSEYIDALKEMVFFPLLYPDFFASYHITPPRGVLLCGPPGTGKTLIA 430
++DE V +DDIGG+ + + ++E+V PL +P F + + PP+G+LL GPPG GKT+IA
Sbjct: 195 RLDE-VGYDDIGGVRKQLGQIRELVELPLRHPQLFKNIGVKPPKGILLYGPPGCGKTMIA 253
Query: 431 RALACAASKAGQKVSFYMRKGADVLSKWVGEAERQLKLLFEEAQRNQPSIIFFDEIDGLA 490
RA+A ++ G F++ G +++SK GE+E L+ FEEA++N PSIIF DEID +A
Sbjct: 254 RAVA---NETG--AFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEIDSIA 308
Query: 491 PVRSSKQEQIHNSIVSTLLALMDGLDSRGQVVLIGATNRVDAIDGALRRPGRFDREFNFP 550
P R Q ++ IVS LL LMDGL SR V+++GATNR ++ID ALRR GRFDRE +
Sbjct: 309 PKREKTQGEVERRIVSQLLTLMDGLKSRAHVIVMGATNRPNSIDPALRRFGRFDREIDIT 368
Query: 551 LPGCEARAEILDIHTRKWKQPPSRELKSELAASCVGYCGADLKALCTEAAIRAFREKYPQ 610
+P R EI+ IHT+ K + +L++ +A GY GADL ALCTE+A++ REK
Sbjct: 369 IPDATGRLEIMRIHTKNMKLDETVDLEA-VANETHGYVGADLAALCTESALQCIREKMDV 427
Query: 611 VYTSDDKFLIDV-DSVTVEKYHFIEAMSTITPAAHRGATVHSRPLS----LVVAPCLQRH 665
+ D+ ++ +S++V + HF A++ P+A R TV P + + ++R
Sbjct: 428 IDLEDETISAEILESMSVTQDHFRTALTLSNPSALR-ETVVEVPTTTWEDIGGLEGVKRE 486
Query: 666 LQKAMNYISDIFPPLGMSSELTKLCML-SHGSAIPLVYRPRLLLCGSEGTGVDHLGPAIL 724
L++ + Y P+ + K M S G +L G G G L AI
Sbjct: 487 LRETVQY------PVEHPEKFRKFGMQPSKG----------VLFYGPPGCGKTLLAKAIA 530
Query: 725 HELEKFPVHSLGLPALLSDPSAKTPEEALVHIFGEARRTTPSILYIPQFN 774
+E + + G P LL+ ++ E + +F +AR+ P +L+ + +
Sbjct: 531 NECQANFISIKG-PELLTMWFGES-EANVRELFDKARQAAPCVLFFDELD 578
Score = 399 (145.5 bits), Expect = 1.1e-33, P = 1.1e-33
Identities = 99/276 (35%), Positives = 152/276 (55%)
Query: 375 SVSFDDIGGLSEYIDALKEMVFFPLLYPDFFASYHITPPRGVLLCGPPGTGKTLIARALA 434
+ +++DIGGL L+E V +P+ +P+ F + + P +GVL GPPG GKTL+A+A+A
Sbjct: 471 TTTWEDIGGLEGVKRELRETVQYPVEHPEKFRKFGMQPSKGVLFYGPPGCGKTLLAKAIA 530
Query: 435 CAASKAGQKVSFYMRKGADVLSKWVGEAERQLKLLFEEAQRNQPSIIFFDEIDGLAPVRS 494
+ +F KG ++L+ W GE+E ++ LF++A++ P ++FFDE+D +A R
Sbjct: 531 NEC-----QANFISIKGPELLTMWFGESEANVRELFDKARQAAPCVLFFDELDSIARSRG 585
Query: 495 SKQEQIHNS---IVSTLLALMDGLDSRGQVVLIGATNRVDAIDGALRRPGRFDREFNFPL 551
S Q + +++ +L MDG++++ V +IGATNR D ID A+ RPGR D+ PL
Sbjct: 586 SSQGDAGGAGDRVINQILTEMDGMNAKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPL 645
Query: 552 PGCEARAEILDIHTRKWKQPPSRELKSE-LAASCVGYCGADLKALCTEAAIRAFREKYPQ 610
P +R IL K P ++++ E L G+ GADL +C A A RE +
Sbjct: 646 PDLPSRVAILKACLNK--SPVAKDVDLEFLGQKTQGFSGADLTEICQRACKLAIRESIEK 703
Query: 611 VYTS--------DDKFLID-VDSVT-VEKYHFIEAM 636
S D K D VD V + + HF EAM
Sbjct: 704 DIESTKARQESGDTKMEDDSVDPVPEITRDHFQEAM 739
>TAIR|locus:2085064 [details] [associations]
symbol:CDC48 "cell division cycle 48" species:3702
"Arabidopsis thaliana" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM;IDA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0042802 "identical protein binding" evidence=IPI] [GO:0022626
"cytosolic ribosome" evidence=IDA] [GO:0005618 "cell wall"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0046686 "response to cadmium ion" evidence=IEP;RCA] [GO:0005886
"plasma membrane" evidence=IDA] [GO:0005635 "nuclear envelope"
evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0005819
"spindle" evidence=IDA] [GO:0009524 "phragmoplast" evidence=IDA]
[GO:0009846 "pollen germination" evidence=IMP] [GO:0009860 "pollen
tube growth" evidence=IMP] [GO:0051301 "cell division"
evidence=IMP] [GO:0005829 "cytosol" evidence=IDA] [GO:0009506
"plasmodesma" evidence=IDA] [GO:0048046 "apoplast" evidence=IDA]
[GO:0005794 "Golgi apparatus" evidence=IDA] [GO:0006486 "protein
glycosylation" evidence=RCA] [GO:0016310 "phosphorylation"
evidence=RCA] [GO:0042742 "defense response to bacterium"
evidence=RCA] [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 Pfam:PF02359 GO:GO:0005886 GO:GO:0009506
GO:GO:0005524 GO:GO:0005794 GO:GO:0005618 GO:GO:0046686
GO:GO:0005635 EMBL:CP002686 GenomeReviews:BA000014_GR EMBL:AC015985
GO:GO:0005730 GO:GO:0051301 GO:GO:0005819 GO:GO:0048046
GO:GO:0015031 GO:GO:0007049 GO:GO:0009860 eggNOG:COG0464
GO:GO:0017111 Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
GO:GO:0022626 GO:GO:0009846 GO:GO:0009524 EMBL:U37587 EMBL:AY065076
EMBL:AY094434 IPI:IPI00547533 PIR:S60112 RefSeq:NP_187595.1
UniGene:At.21739 UniGene:At.33291 ProteinModelPortal:P54609
SMR:P54609 IntAct:P54609 STRING:P54609 PaxDb:P54609 PRIDE:P54609
ProMEX:P54609 EnsemblPlants:AT3G09840.1 GeneID:820142
KEGG:ath:AT3G09840 GeneFarm:1893 TAIR:At3g09840
HOGENOM:HOG000223224 InParanoid:P54609 KO:K13525 OMA:QIANECH
PhylomeDB:P54609 ProtClustDB:CLSN2684913 Genevestigator:P54609
GermOnline:AT3G09840 InterPro:IPR004201 PANTHER:PTHR23077:SF18
Pfam:PF02933 SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243
Uniprot:P54609
Length = 809
Score = 595 (214.5 bits), Expect = 3.8e-57, P = 3.8e-57
Identities = 151/405 (37%), Positives = 224/405 (55%)
Query: 374 ESVSFDDIGGLSEYIDALKEMVFFPLLYPDFFASYHITPPRGVLLCGPPGTGKTLIARAL 433
+ V +DD+GG+ + + ++E+V PL +P F S + PP+G+LL GPPG+GKTLIARA+
Sbjct: 202 DDVGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGSGKTLIARAV 261
Query: 434 ACAASKAGQKVSFYMRKGADVLSKWVGEAERQLKLLFEEAQRNQPSIIFFDEIDGLAPVR 493
A ++ G F+ G +++SK GE+E L+ FEEA++N PSIIF DEID +AP R
Sbjct: 262 A---NETG--AFFFCINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEIDSIAPKR 316
Query: 494 SSKQEQIHNSIVSTLLALMDGLDSRGQVVLIGATNRVDAIDGALRRPGRFDREFNFPLPG 553
++ IVS LL LMDGL SR V+++GATNR ++ID ALRR GRFDRE + +P
Sbjct: 317 EKTNGEVERRIVSQLLTLMDGLKSRAHVIVMGATNRPNSIDPALRRFGRFDREIDIGVPD 376
Query: 554 CEARAEILDIHTRKWKQPPSRELKSELAASCVGYCGADLKALCTEAAIRAFREKYPQVYT 613
R E+L IHT+ K +L+ ++ GY GADL ALCTEAA++ REK +
Sbjct: 377 EIGRLEVLRIHTKNMKLAEDVDLE-RISKDTHGYVGADLAALCTEAALQCIREKMDVIDL 435
Query: 614 SDDKFLIDV-DSVTVEKYHFIEAMSTITPAAHRGATVHSRPLS---LVVAPCLQRHLQKA 669
DD ++ +S+ V HF A+ P+A R V +S + ++R LQ+
Sbjct: 436 EDDSIDAEILNSMAVTNEHFHTALGNSNPSALRETVVEVPNVSWNDIGGLENVKRELQET 495
Query: 670 MNYISDIFPPLGMSSELTKLCMLSHGSAIPLVYRPRLLLCGSEGTGVDHLGPAILHELEK 729
+ Y P+ + K M S + L Y P G G L AI +E +
Sbjct: 496 VQY------PVEHPEKFEKFGM-SPSKGV-LFYGP-------PGCGKTLLAKAIANECQA 540
Query: 730 FPVHSLGLPALLSDPSAKTPEEALVHIFGEARRTTPSILYIPQFN 774
+ G P LL+ ++ E + IF +AR++ P +L+ + +
Sbjct: 541 NFISVKG-PELLTMWFGES-EANVREIFDKARQSAPCVLFFDELD 583
Score = 391 (142.7 bits), Expect = 8.5e-33, P = 8.5e-33
Identities = 92/267 (34%), Positives = 150/267 (56%)
Query: 345 DTLAALTSGIQTAGPSSKGGADIQPLQVDESVSFDDIGGLSEYIDALKEMVFFPLLYPDF 404
+++A TA +S A + + +VS++DIGGL L+E V +P+ +P+
Sbjct: 446 NSMAVTNEHFHTALGNSNPSALRETVVEVPNVSWNDIGGLENVKRELQETVQYPVEHPEK 505
Query: 405 FASYHITPPRGVLLCGPPGTGKTLIARALACAASKAGQKVSFYMRKGADVLSKWVGEAER 464
F + ++P +GVL GPPG GKTL+A+A+A + +F KG ++L+ W GE+E
Sbjct: 506 FEKFGMSPSKGVLFYGPPGCGKTLLAKAIANEC-----QANFISVKGPELLTMWFGESEA 560
Query: 465 QLKLLFEEAQRNQPSIIFFDEIDGLAPVRSSKQEQ----IHNSIVSTLLALMDGLDSRGQ 520
++ +F++A+++ P ++FFDE+D +A R + +++ LL MDG++++
Sbjct: 561 NVREIFDKARQSAPCVLFFDELDSIATQRGGGSGGDGGGAADRVLNQLLTEMDGMNAKKT 620
Query: 521 VVLIGATNRVDAIDGALRRPGRFDREFNFPLPGCEARAEILDIHTRKWKQPPSRELK-SE 579
V +IGATNR D ID AL RPGR D+ PLP ++R I RK P ++++
Sbjct: 621 VFIIGATNRPDIIDSALLRPGRLDQLIYIPLPDEDSRLNIFKAALRK--SPIAKDVDIGA 678
Query: 580 LAASCVGYCGADLKALCTEAAIRAFRE 606
LA G+ GAD+ +C A A RE
Sbjct: 679 LAKYTQGFSGADITEICQRACKYAIRE 705
>WB|WBGene00008053 [details] [associations]
symbol:cdc-48.2 species:6239 "Caenorhabditis elegans"
[GO:0016887 "ATPase activity" evidence=IEA;IDA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA] [GO:0006310
"DNA recombination" evidence=IEA] [GO:0009378 "four-way junction
helicase activity" evidence=IEA] [GO:0009792 "embryo development
ending in birth or egg hatching" evidence=IGI;IMP] [GO:0040010
"positive regulation of growth rate" evidence=IMP] [GO:0040011
"locomotion" evidence=IMP] [GO:0002119 "nematode larval
development" evidence=IMP] [GO:0051301 "cell division"
evidence=IMP] [GO:0000910 "cytokinesis" evidence=IMP] [GO:0007126
"meiosis" evidence=IMP] [GO:0030968 "endoplasmic reticulum unfolded
protein response" evidence=IMP] [GO:0071712 "ER-associated
misfolded protein catabolic process" evidence=IGI] [GO:0034098
"Cdc48p-Npl4p-Ufd1p AAA ATPase complex" evidence=IPI] [GO:0005634
"nucleus" evidence=IDA] [GO:0006200 "ATP catabolic process"
evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 InterPro:IPR003338 Pfam:PF02359 GO:GO:0005524
GO:GO:0005634 GO:GO:0009792 GO:GO:0007126 GO:GO:0040010
GO:GO:0002119 GO:GO:0040011 EMBL:Z48334 GO:GO:0016887 GO:GO:0000910
eggNOG:COG0464 Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
InterPro:IPR015415 Pfam:PF09336 GO:GO:0030968 HOGENOM:HOG000223224
KO:K13525 InterPro:IPR004201 PANTHER:PTHR23077:SF18 Pfam:PF02933
SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243 GO:GO:0034098
GeneTree:ENSGT00700000104534 GO:GO:0071712 EMBL:Z48045 PIR:T19879
RefSeq:NP_495705.1 ProteinModelPortal:P54812 SMR:P54812
DIP:DIP-26566N IntAct:P54812 MINT:MINT-1090535 STRING:P54812
PaxDb:P54812 PRIDE:P54812 EnsemblMetazoa:C41C4.8.1
EnsemblMetazoa:C41C4.8.2 EnsemblMetazoa:C41C4.8.3 GeneID:174309
KEGG:cel:CELE_C41C4.8 UCSC:C41C4.8.1 CTD:174309 WormBase:C41C4.8
InParanoid:P54812 OMA:ADRQDWE NextBio:883464 Uniprot:P54812
Length = 810
Score = 593 (213.8 bits), Expect = 1.9e-56, P = 1.9e-56
Identities = 154/404 (38%), Positives = 223/404 (55%)
Query: 376 VSFDDIGGLSEYIDALKEMVFFPLLYPDFFASYHITPPRGVLLCGPPGTGKTLIARALAC 435
V +DD+GG+ + + +KEMV PL +P F + + PPRG+LL GPPGTGKTLIARA+A
Sbjct: 206 VGYDDLGGVRKQLAQIKEMVELPLRHPQLFKAIGVKPPRGILLFGPPGTGKTLIARAVA- 264
Query: 436 AASKAGQKVSFYMRKGADVLSKWVGEAERQLKLLFEEAQRNQPSIIFFDEIDGLAPVRSS 495
++ G F++ G +++SK GE+E L+ F E ++N P+I+F DEID +AP R
Sbjct: 265 --NETG--AFFFLINGPEIMSKMSGESESNLRKAFAECEKNSPAILFIDEIDAIAPKREK 320
Query: 496 KQEQIHNSIVSTLLALMDGLDSRGQVVLIGATNRVDAIDGALRRPGRFDREFNFPLPGCE 555
++ IVS LL LMDGL +R VV+I ATNR ++IDGALRR GRFDRE + +P
Sbjct: 321 AHGEVEKRIVSQLLTLMDGLKTRAHVVVIAATNRPNSIDGALRRFGRFDREIDIGIPDAV 380
Query: 556 ARAEILDIHTRKWKQPPSRELKSELAASCVGYCGADLKALCTEAAIRAFREKYPQVYTSD 615
R EIL IHT+ K +L+ ++A C G+ GADL +LC+EAAI+ REK + D
Sbjct: 381 GRLEILRIHTKNMKLGEDVDLE-QVANECHGFVGADLASLCSEAAIQQIREKMELIDLED 439
Query: 616 DKFLIDV-DSVTVEKYHFIEAMSTITPAAHRGATVHSRPLSLVVAPCLQ---RHLQKAMN 671
D +V +S+ V +F AM +P+A R A V + + LQ R LQ+ +
Sbjct: 440 DTIDAEVLNSLAVTMENFRFAMGKSSPSALREAVVETPNTTWSDIGGLQNVKRELQELVQ 499
Query: 672 YISDIFPPLGMSSELTKLCML-SHGSAIPLVYRPRLLLCGSEGTGVDHLGPAILHELEKF 730
Y P+ + K M S G +L G G G L AI +E +
Sbjct: 500 Y------PVEHPEKYLKFGMQPSRG----------VLFYGPPGCGKTLLAKAIANECQAN 543
Query: 731 PVHSLGLPALLSDPSAKTPEEALVHIFGEARRTTPSILYIPQFN 774
+ G P LL+ ++ E + +F +AR P +L+ + +
Sbjct: 544 FISIKG-PELLTMWFGES-EANVRDVFDKARAAAPCVLFFDELD 585
Score = 390 (142.3 bits), Expect = 1.1e-32, P = 1.1e-32
Identities = 92/266 (34%), Positives = 146/266 (54%)
Query: 345 DTLAALTSGIQTAGPSSKGGADIQPLQVDESVSFDDIGGLSEYIDALKEMVFFPLLYPDF 404
++LA + A S A + + + ++ DIGGL L+E+V +P+ +P+
Sbjct: 448 NSLAVTMENFRFAMGKSSPSALREAVVETPNTTWSDIGGLQNVKRELQELVQYPVEHPEK 507
Query: 405 FASYHITPPRGVLLCGPPGTGKTLIARALACAASKAGQKVSFYMRKGADVLSKWVGEAER 464
+ + + P RGVL GPPG GKTL+A+A+A + +F KG ++L+ W GE+E
Sbjct: 508 YLKFGMQPSRGVLFYGPPGCGKTLLAKAIANEC-----QANFISIKGPELLTMWFGESEA 562
Query: 465 QLKLLFEEAQRNQPSIIFFDEIDGLAPVRSSKQEQIHNS---IVSTLLALMDGLDSRGQV 521
++ +F++A+ P ++FFDE+D +A R + +++ +L MDG++++ V
Sbjct: 563 NVRDVFDKARAAAPCVLFFDELDSIAKARGGSVGDAGGAADRVINQVLTEMDGMNAKKNV 622
Query: 522 VLIGATNRVDAIDGALRRPGRFDREFNFPLPGCEARAEILDIHTRKWKQPPSRELKSE-L 580
+IGATNR D ID A+ RPGR D+ PLP +R +I RK P S +L L
Sbjct: 623 FIIGATNRPDIIDPAVLRPGRLDQLIYIPLPDEASRLQIFKASLRK--TPLSADLDLNFL 680
Query: 581 AASCVGYCGADLKALCTEAAIRAFRE 606
A + VG+ GADL +C A A RE
Sbjct: 681 AKNTVGFSGADLTEICQRACKLAIRE 706
>UNIPROTKB|P54812 [details] [associations]
symbol:cdc-48.2 "Transitional endoplasmic reticulum ATPase
homolog 2" species:6239 "Caenorhabditis elegans" [GO:0042802
"identical protein binding" evidence=IPI] [GO:0005515 "protein
binding" evidence=IPI] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 InterPro:IPR003338 Pfam:PF02359 GO:GO:0005524
GO:GO:0005634 GO:GO:0009792 GO:GO:0007126 GO:GO:0040010
GO:GO:0002119 GO:GO:0040011 EMBL:Z48334 GO:GO:0016887 GO:GO:0000910
eggNOG:COG0464 Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
InterPro:IPR015415 Pfam:PF09336 GO:GO:0030968 HOGENOM:HOG000223224
KO:K13525 InterPro:IPR004201 PANTHER:PTHR23077:SF18 Pfam:PF02933
SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243 GO:GO:0034098
GeneTree:ENSGT00700000104534 GO:GO:0071712 EMBL:Z48045 PIR:T19879
RefSeq:NP_495705.1 ProteinModelPortal:P54812 SMR:P54812
DIP:DIP-26566N IntAct:P54812 MINT:MINT-1090535 STRING:P54812
PaxDb:P54812 PRIDE:P54812 EnsemblMetazoa:C41C4.8.1
EnsemblMetazoa:C41C4.8.2 EnsemblMetazoa:C41C4.8.3 GeneID:174309
KEGG:cel:CELE_C41C4.8 UCSC:C41C4.8.1 CTD:174309 WormBase:C41C4.8
InParanoid:P54812 OMA:ADRQDWE NextBio:883464 Uniprot:P54812
Length = 810
Score = 593 (213.8 bits), Expect = 1.9e-56, P = 1.9e-56
Identities = 154/404 (38%), Positives = 223/404 (55%)
Query: 376 VSFDDIGGLSEYIDALKEMVFFPLLYPDFFASYHITPPRGVLLCGPPGTGKTLIARALAC 435
V +DD+GG+ + + +KEMV PL +P F + + PPRG+LL GPPGTGKTLIARA+A
Sbjct: 206 VGYDDLGGVRKQLAQIKEMVELPLRHPQLFKAIGVKPPRGILLFGPPGTGKTLIARAVA- 264
Query: 436 AASKAGQKVSFYMRKGADVLSKWVGEAERQLKLLFEEAQRNQPSIIFFDEIDGLAPVRSS 495
++ G F++ G +++SK GE+E L+ F E ++N P+I+F DEID +AP R
Sbjct: 265 --NETG--AFFFLINGPEIMSKMSGESESNLRKAFAECEKNSPAILFIDEIDAIAPKREK 320
Query: 496 KQEQIHNSIVSTLLALMDGLDSRGQVVLIGATNRVDAIDGALRRPGRFDREFNFPLPGCE 555
++ IVS LL LMDGL +R VV+I ATNR ++IDGALRR GRFDRE + +P
Sbjct: 321 AHGEVEKRIVSQLLTLMDGLKTRAHVVVIAATNRPNSIDGALRRFGRFDREIDIGIPDAV 380
Query: 556 ARAEILDIHTRKWKQPPSRELKSELAASCVGYCGADLKALCTEAAIRAFREKYPQVYTSD 615
R EIL IHT+ K +L+ ++A C G+ GADL +LC+EAAI+ REK + D
Sbjct: 381 GRLEILRIHTKNMKLGEDVDLE-QVANECHGFVGADLASLCSEAAIQQIREKMELIDLED 439
Query: 616 DKFLIDV-DSVTVEKYHFIEAMSTITPAAHRGATVHSRPLSLVVAPCLQ---RHLQKAMN 671
D +V +S+ V +F AM +P+A R A V + + LQ R LQ+ +
Sbjct: 440 DTIDAEVLNSLAVTMENFRFAMGKSSPSALREAVVETPNTTWSDIGGLQNVKRELQELVQ 499
Query: 672 YISDIFPPLGMSSELTKLCML-SHGSAIPLVYRPRLLLCGSEGTGVDHLGPAILHELEKF 730
Y P+ + K M S G +L G G G L AI +E +
Sbjct: 500 Y------PVEHPEKYLKFGMQPSRG----------VLFYGPPGCGKTLLAKAIANECQAN 543
Query: 731 PVHSLGLPALLSDPSAKTPEEALVHIFGEARRTTPSILYIPQFN 774
+ G P LL+ ++ E + +F +AR P +L+ + +
Sbjct: 544 FISIKG-PELLTMWFGES-EANVRDVFDKARAAAPCVLFFDELD 585
Score = 390 (142.3 bits), Expect = 1.1e-32, P = 1.1e-32
Identities = 92/266 (34%), Positives = 146/266 (54%)
Query: 345 DTLAALTSGIQTAGPSSKGGADIQPLQVDESVSFDDIGGLSEYIDALKEMVFFPLLYPDF 404
++LA + A S A + + + ++ DIGGL L+E+V +P+ +P+
Sbjct: 448 NSLAVTMENFRFAMGKSSPSALREAVVETPNTTWSDIGGLQNVKRELQELVQYPVEHPEK 507
Query: 405 FASYHITPPRGVLLCGPPGTGKTLIARALACAASKAGQKVSFYMRKGADVLSKWVGEAER 464
+ + + P RGVL GPPG GKTL+A+A+A + +F KG ++L+ W GE+E
Sbjct: 508 YLKFGMQPSRGVLFYGPPGCGKTLLAKAIANEC-----QANFISIKGPELLTMWFGESEA 562
Query: 465 QLKLLFEEAQRNQPSIIFFDEIDGLAPVRSSKQEQIHNS---IVSTLLALMDGLDSRGQV 521
++ +F++A+ P ++FFDE+D +A R + +++ +L MDG++++ V
Sbjct: 563 NVRDVFDKARAAAPCVLFFDELDSIAKARGGSVGDAGGAADRVINQVLTEMDGMNAKKNV 622
Query: 522 VLIGATNRVDAIDGALRRPGRFDREFNFPLPGCEARAEILDIHTRKWKQPPSRELKSE-L 580
+IGATNR D ID A+ RPGR D+ PLP +R +I RK P S +L L
Sbjct: 623 FIIGATNRPDIIDPAVLRPGRLDQLIYIPLPDEASRLQIFKASLRK--TPLSADLDLNFL 680
Query: 581 AASCVGYCGADLKALCTEAAIRAFRE 606
A + VG+ GADL +C A A RE
Sbjct: 681 AKNTVGFSGADLTEICQRACKLAIRE 706
>ZFIN|ZDB-GENE-060312-22 [details] [associations]
symbol:zgc:136908 "zgc:136908" species:7955 "Danio
rerio" [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0005575 "cellular_component" evidence=ND]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 Pfam:PF02359 ZFIN:ZDB-GENE-060312-22
GO:GO:0005524 eggNOG:COG0464 GO:GO:0017111 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 HOGENOM:HOG000223224
InterPro:IPR004201 PANTHER:PTHR23077:SF18 Pfam:PF02933
SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243
GeneTree:ENSGT00700000104534 HOVERGEN:HBG001226 EMBL:CU571167
EMBL:BC114306 IPI:IPI00835697 RefSeq:NP_001035017.1
UniGene:Dr.47664 SMR:Q29RA2 STRING:Q29RA2
Ensembl:ENSDART00000100551 GeneID:563679 KEGG:dre:563679
InParanoid:Q29RA2 OrthoDB:EOG4WWRMB NextBio:20885016 Uniprot:Q29RA2
Length = 805
Score = 586 (211.3 bits), Expect = 2.7e-56, Sum P(2) = 2.7e-56
Identities = 151/404 (37%), Positives = 222/404 (54%)
Query: 376 VSFDDIGGLSEYIDALKEMVFFPLLYPDFFASYHITPPRGVLLCGPPGTGKTLIARALAC 435
+ +DDIGG + + +KEMV PL +P F + + PPRG+LL GPPGTGKTL+ARA+A
Sbjct: 203 IGYDDIGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILLYGPPGTGKTLVARAVA- 261
Query: 436 AASKAGQKVSFYMRKGADVLSKWVGEAERQLKLLFEEAQRNQPSIIFFDEIDGLAPVRSS 495
++ G F++ G +++SK GE+E L+ FEEA++N P+IIF DE+D +AP R
Sbjct: 262 --NETG--AFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPAIIFIDELDAIAPKREK 317
Query: 496 KQEQIHNSIVSTLLALMDGLDSRGQVVLIGATNRVDAIDGALRRPGRFDREFNFPLPGCE 555
++ IVS LL LMDGL R VV++ ATNR +++D ALRR GRFDRE + +P
Sbjct: 318 THGEVERRIVSQLLTLMDGLKQRAHVVVMAATNRPNSVDAALRRFGRFDREIDIGIPDST 377
Query: 556 ARAEILDIHTRKWKQPPSRELKSELAASCVGYCGADLKALCTEAAIRAFREKYPQVYTSD 615
R EIL IHT+ K +L+ +++A G+ GADL ALC+EAA++A R+K + D
Sbjct: 378 GRLEILQIHTKNMKLSEDVDLE-QISAETHGHVGADLAALCSEAALQAIRKKMTLIDLED 436
Query: 616 DKFLIDV-DSVTVEKYHFIEAMSTITPAAHRGATV---HSRPLSLVVAPCLQRHLQKAMN 671
D D+ +S+ V F A+S P+A R V H + ++R LQ+ +
Sbjct: 437 DSIDADLLNSLAVTMDDFKWALSQSNPSALRETVVEVPHVNWEDIGGLDEVKRELQELVQ 496
Query: 672 YISDIFPPLGMSSELTKLCML-SHGSAIPLVYRPRLLLCGSEGTGVDHLGPAILHELEKF 730
Y P+ + K M S G +L G G G L AI +E +
Sbjct: 497 Y------PVEYPDKFLKFGMTPSRG----------VLFYGPPGCGKTLLAKAIANECQAN 540
Query: 731 PVHSLGLPALLSDPSAKTPEEALVHIFGEARRTTPSILYIPQFN 774
V G P LL+ ++ E + +F +AR+ P IL+ + +
Sbjct: 541 FVSIKG-PELLTMWFGES-EANVRDVFDKARQAAPCILFFDELD 582
Score = 420 (152.9 bits), Expect = 1.3e-35, Sum P(3) = 1.3e-35
Identities = 104/277 (37%), Positives = 157/277 (56%)
Query: 376 VSFDDIGGLSEYIDALKEMVFFPLLYPDFFASYHITPPRGVLLCGPPGTGKTLIARALAC 435
V+++DIGGL E L+E+V +P+ YPD F + +TP RGVL GPPG GKTL+A+A+A
Sbjct: 476 VNWEDIGGLDEVKRELQELVQYPVEYPDKFLKFGMTPSRGVLFYGPPGCGKTLLAKAIAN 535
Query: 436 AASKAGQKVSFYMRKGADVLSKWVGEAERQLKLLFEEAQRNQPSIIFFDEIDGLAPVRSS 495
+ +F KG ++L+ W GE+E ++ +F++A++ P I+FFDE+D +A R
Sbjct: 536 EC-----QANFVSIKGPELLTMWFGESEANVRDVFDKARQAAPCILFFDELDSIAKARGG 590
Query: 496 KQEQIHNS---IVSTLLALMDGLDSRGQVVLIGATNRVDAIDGALRRPGRFDREFNFPLP 552
+ +++ +L MDG+ ++ V +IGATNR D ID A+ RPGR D+ PLP
Sbjct: 591 GAGDAGGAADRVINQILTEMDGMTNKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPLP 650
Query: 553 GCEARAEILDIHTRKWKQPPSRELK-SELAASCVGYCGADLKALCT-----------EAA 600
+R IL + RK P ++++ L+ G+ GADL +C EA
Sbjct: 651 DMPSRTAILRANLRK--SPVAKDVDLMYLSKITEGFSGADLTEICQRACKLAIREAIEAE 708
Query: 601 IRAFREKYPQVYTSDDKFLIDVDSVT-VEKYHFIEAM 636
IRA R++ + T+ D D D V + K HF EAM
Sbjct: 709 IRAERQRQARKETAMDD---DYDPVPEIRKDHFEEAM 742
Score = 46 (21.3 bits), Expect = 1.3e-35, Sum P(3) = 1.3e-35
Identities = 17/58 (29%), Positives = 29/58 (50%)
Query: 335 VAASGWGHQGDTLAALTSGIQTAGPSSKGGADIQPLQVDESVSFDDIGGLSEYIDALK 392
++A GH G LAAL S + A + + + L+ D+S+ D + L+ +D K
Sbjct: 401 ISAETHGHVGADLAALCS--EAALQAIRKKMTLIDLE-DDSIDADLLNSLAVTMDDFK 455
Score = 40 (19.1 bits), Expect = 2.7e-56, Sum P(2) = 2.7e-56
Identities = 19/65 (29%), Positives = 29/65 (44%)
Query: 84 RKRRISVNLEDYTDSSGSEDEDLMRPSYRPLRNRMRNNMSQDELSPSKRKKVVEAKPTPR 143
RKRR +V + D+ G+E + R + LR R+ + +S K K + P
Sbjct: 64 RKRRQTVCIVLTDDTCGNERVRMNRVTRNNLRVRLGDVISIHPCPDVKYGKRIHVLPIDD 123
Query: 144 R-EGL 147
EGL
Sbjct: 124 TIEGL 128
>TAIR|locus:2101933 [details] [associations]
symbol:AtCDC48B "AT3G53230" species:3702 "Arabidopsis
thaliana" [GO:0005524 "ATP binding" evidence=ISS] [GO:0005730
"nucleolus" evidence=IDA] [GO:0046686 "response to cadmium ion"
evidence=IEP] [GO:0005886 "plasma membrane" evidence=IDA]
[GO:0005829 "cytosol" evidence=IDA] [GO:0005794 "Golgi apparatus"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005654 "nucleoplasm" evidence=IDA] [GO:0045732 "positive
regulation of protein catabolic process" evidence=IDA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 Pfam:PF02359 GO:GO:0005829 GO:GO:0005886
GO:GO:0005524 GO:GO:0005794 GO:GO:0046686 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0005654 GO:GO:0005730 GO:GO:0051301
GO:GO:0005856 GO:GO:0015031 GO:GO:0007049 eggNOG:COG0464
GO:GO:0017111 Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
GO:GO:0045732 GO:GO:0009524 EMBL:AL132958 HOGENOM:HOG000223224
KO:K13525 ProtClustDB:CLSN2684913 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 EMBL:AK228801 IPI:IPI00520856 PIR:T46169
RefSeq:NP_190891.1 UniGene:At.23168 ProteinModelPortal:Q9SCN8
SMR:Q9SCN8 STRING:Q9SCN8 PaxDb:Q9SCN8 PRIDE:Q9SCN8
EnsemblPlants:AT3G53230.1 GeneID:824489 KEGG:ath:AT3G53230
GeneFarm:1909 TAIR:At3g53230 InParanoid:Q9SCN8 OMA:DIRRYEE
PhylomeDB:Q9SCN8 Genevestigator:Q9SCN8 GermOnline:AT3G53230
Uniprot:Q9SCN8
Length = 815
Score = 593 (213.8 bits), Expect = 3.5e-56, P = 3.5e-56
Identities = 153/408 (37%), Positives = 227/408 (55%)
Query: 371 QVDESVSFDDIGGLSEYIDALKEMVFFPLLYPDFFASYHITPPRGVLLCGPPGTGKTLIA 430
++DE V +DD+GG+ + + ++E+V PL +P F S + PP+G+LL GPPG+GKTLIA
Sbjct: 201 RLDE-VGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGSGKTLIA 259
Query: 431 RALACAASKAGQKVSFYMRKGADVLSKWVGEAERQLKLLFEEAQRNQPSIIFFDEIDGLA 490
RA+A ++ G F+ G +++SK GE+E L+ FEEA++N PSIIF DEID +A
Sbjct: 260 RAVA---NETG--AFFFCINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEIDSIA 314
Query: 491 PVRSSKQEQIHNSIVSTLLALMDGLDSRGQVVLIGATNRVDAIDGALRRPGRFDREFNFP 550
P R ++ IVS LL LMDGL SR V+++GATNR ++ID ALRR GRFDRE +
Sbjct: 315 PKREKTHGEVERRIVSQLLTLMDGLKSRAHVIVMGATNRPNSIDPALRRFGRFDREIDIG 374
Query: 551 LPGCEARAEILDIHTRKWKQPPSRELKSELAASCVGYCGADLKALCTEAAIRAFREKYPQ 610
+P R E+L IHT+ K +L+ ++ GY GADL ALCTEAA++ REK
Sbjct: 375 VPDEIGRLEVLRIHTKNMKLAEDVDLE-RVSKDTHGYVGADLAALCTEAALQCIREKMDV 433
Query: 611 VYTSDDKFLIDV-DSVTVEKYHFIEAMSTITPAAHRGATVHSRPLSLVVAPCLQ---RHL 666
+ D++ ++ +S+ V HF A+ P+A R V +S L+ R L
Sbjct: 434 IDLDDEEIDAEILNSMAVSNDHFQTALGNSNPSALRETVVEVPNVSWEDIGGLENVKREL 493
Query: 667 QKAMNYISDIFPPLGMSSELTKLCMLSHGSAIPLVYRPRLLLCGSEGTGVDHLGPAILHE 726
Q+ + Y P+ + K M S + L Y P G G L AI +E
Sbjct: 494 QETVQY------PVEHPEKFEKFGM-SPSKGV-LFYGP-------PGCGKTLLAKAIANE 538
Query: 727 LEKFPVHSLGLPALLSDPSAKTPEEALVHIFGEARRTTPSILYIPQFN 774
+ + G P LL+ ++ E + IF +AR++ P +L+ + +
Sbjct: 539 CQANFISIKG-PELLTMWFGES-EANVREIFDKARQSAPCVLFFDELD 584
Score = 400 (145.9 bits), Expect = 8.9e-34, P = 8.9e-34
Identities = 93/265 (35%), Positives = 152/265 (57%)
Query: 345 DTLAALTSGIQTAGPSSKGGADIQPLQVDESVSFDDIGGLSEYIDALKEMVFFPLLYPDF 404
+++A QTA +S A + + +VS++DIGGL L+E V +P+ +P+
Sbjct: 447 NSMAVSNDHFQTALGNSNPSALRETVVEVPNVSWEDIGGLENVKRELQETVQYPVEHPEK 506
Query: 405 FASYHITPPRGVLLCGPPGTGKTLIARALACAASKAGQKVSFYMRKGADVLSKWVGEAER 464
F + ++P +GVL GPPG GKTL+A+A+A + +F KG ++L+ W GE+E
Sbjct: 507 FEKFGMSPSKGVLFYGPPGCGKTLLAKAIANEC-----QANFISIKGPELLTMWFGESEA 561
Query: 465 QLKLLFEEAQRNQPSIIFFDEIDGLAPVRSSKQEQIHNS---IVSTLLALMDGLDSRGQV 521
++ +F++A+++ P ++FFDE+D +A R + + +++ LL MDG++++ V
Sbjct: 562 NVREIFDKARQSAPCVLFFDELDSIATQRGNSVGDAGGAADRVLNQLLTEMDGMNAKKTV 621
Query: 522 VLIGATNRVDAIDGALRRPGRFDREFNFPLPGCEARAEILDIHTRKWKQPPSRELKSELA 581
+IGATNR D ID AL RPGR D+ PLP E+R +I RK +L++ LA
Sbjct: 622 FIIGATNRPDIIDPALLRPGRLDQLIYIPLPDEESRYQIFKSCLRKSPVAKDVDLRA-LA 680
Query: 582 ASCVGYCGADLKALCTEAAIRAFRE 606
G+ GAD+ +C + A RE
Sbjct: 681 KYTQGFSGADITEICQRSCKYAIRE 705
>GENEDB_PFALCIPARUM|PFF0940c [details] [associations]
symbol:PFF0940c "cell division cycle protein 48
homologue, putative" species:5833 "Plasmodium falciparum"
[GO:0051726 "regulation of cell cycle" evidence=ISS] [GO:0016887
"ATPase activity" evidence=ISS] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005938
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 InterPro:IPR003338
Pfam:PF02359 GO:GO:0005524 GO:GO:0051301 GO:GO:0051726
GO:GO:0017111 Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
HOGENOM:HOG000223224 KO:K13525 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 OMA:AYRPIHK EMBL:AL844505 RefSeq:XP_966179.2
ProteinModelPortal:C6KT34 PRIDE:C6KT34
EnsemblProtists:PFF0940c:mRNA GeneID:3885942 KEGG:pfa:PFF0940c
EuPathDB:PlasmoDB:PF3D7_0619400 ProtClustDB:CLSZ2429060
Uniprot:C6KT34
Length = 828
Score = 595 (214.5 bits), Expect = 4.0e-56, P = 4.0e-56
Identities = 130/282 (46%), Positives = 181/282 (64%)
Query: 371 QVDESVSFDDIGGLSEYIDALKEMVFFPLLYPDFFASYHITPPRGVLLCGPPGTGKTLIA 430
++DE + +DDIGG + + ++EM+ PL +P F + + PPRGVLL GPPG+GKT IA
Sbjct: 200 KLDE-IGYDDIGGCKKQLAQIREMIELPLRHPGLFKTLGVKPPRGVLLYGPPGSGKTCIA 258
Query: 431 RALACAASKAGQKVSFYMRKGADVLSKWVGEAERQLKLLFEEAQRNQPSIIFFDEIDGLA 490
RA+A ++ G F++ G +V+SK GEAE L+ FEEA++N P+IIF DEID +A
Sbjct: 259 RAVA---NETG--AFFFLINGPEVMSKMAGEAEANLRRAFEEAEKNSPAIIFIDEIDSIA 313
Query: 491 PVRSSKQEQIHNSIVSTLLALMDGLDSRGQVVLIGATNRVDAIDGALRRPGRFDREFNFP 550
P R ++ +VS LL LMDG+ SRGQVV+I ATNR ++ID ALRR GRFDRE +
Sbjct: 314 PKREKTNGEVERRVVSQLLTLMDGIKSRGQVVVIAATNRQNSIDPALRRFGRFDREIDIG 373
Query: 551 LPGCEARAEILDIHTRKWKQPPSRELKSELAASCVGYCGADLKALCTEAAIRAFREKYPQ 610
+P R EIL IHT+ K P +L+ ELA++ G+ GADL LCTEAA+ REK
Sbjct: 374 VPDDNGRFEILRIHTKNMKLSPDVKLE-ELASNTHGFVGADLAQLCTEAALTCIREKMDV 432
Query: 611 VYTSDDKFLID---VDSVTVEKYHFIEAMSTITPAAHRGATV 649
+ D+ +ID ++S+ V + HF A+ T P++ R V
Sbjct: 433 IDLEDE--IIDKEVLESMCVTQDHFNMALGTCNPSSLRETVV 472
Score = 406 (148.0 bits), Expect = 2.1e-34, P = 2.1e-34
Identities = 91/236 (38%), Positives = 135/236 (57%)
Query: 375 SVSFDDIGGLSEYIDALKEMVFFPLLYPDFFASYHITPPRGVLLCGPPGTGKTLIARALA 434
+V +DDIGGL E L+EM+ +P+ +PD F + ++P RGVL GPPG GKTL+A+A+A
Sbjct: 476 NVKWDDIGGLDEVKSTLREMILYPIDHPDKFEKFGMSPSRGVLFYGPPGCGKTLLAKAVA 535
Query: 435 CAASKAGQKVSFYMRKGADVLSKWVGEAERQLKLLFEEAQRNQPSIIFFDEIDGLAPVRS 494
S +F KG ++L+ W GE+E ++ +F++A+ P ++FFDE+D + R
Sbjct: 536 SECS-----ANFVSIKGPELLTMWFGESEANVREVFDKARAAAPCVLFFDELDSIGTQRG 590
Query: 495 SKQEQ---IHNSIVSTLLALMDGLDSRGQVVLIGATNRVDAIDGALRRPGRFDREFNFPL 551
S + +++ LL +DG+ + + IGATNR + +D AL RPGR D+ PL
Sbjct: 591 SSLGDGSGAGDRVMNQLLTEIDGVGPKKNLFFIGATNRPELLDEALLRPGRLDQLIYIPL 650
Query: 552 PGCEARAEILDIHTRKWKQPPSRELKSE-LAASCVGYCGADLKALCTEAAIRAFRE 606
P AR IL RK P + + + LA G+ GADL LC AA A R+
Sbjct: 651 PDLGARISILTAILRKC--PVAENVPIDFLAQKTAGFSGADLAELCQRAARAAIRD 704
>UNIPROTKB|C6KT34 [details] [associations]
symbol:PFF0940c "Cell division cycle protein 48 homologue,
putative" species:36329 "Plasmodium falciparum 3D7" [GO:0051726
"regulation of cell cycle" evidence=ISS] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005938
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 InterPro:IPR003338
Pfam:PF02359 GO:GO:0005524 GO:GO:0051301 GO:GO:0051726
GO:GO:0017111 Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
HOGENOM:HOG000223224 KO:K13525 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 OMA:AYRPIHK EMBL:AL844505 RefSeq:XP_966179.2
ProteinModelPortal:C6KT34 PRIDE:C6KT34
EnsemblProtists:PFF0940c:mRNA GeneID:3885942 KEGG:pfa:PFF0940c
EuPathDB:PlasmoDB:PF3D7_0619400 ProtClustDB:CLSZ2429060
Uniprot:C6KT34
Length = 828
Score = 595 (214.5 bits), Expect = 4.0e-56, P = 4.0e-56
Identities = 130/282 (46%), Positives = 181/282 (64%)
Query: 371 QVDESVSFDDIGGLSEYIDALKEMVFFPLLYPDFFASYHITPPRGVLLCGPPGTGKTLIA 430
++DE + +DDIGG + + ++EM+ PL +P F + + PPRGVLL GPPG+GKT IA
Sbjct: 200 KLDE-IGYDDIGGCKKQLAQIREMIELPLRHPGLFKTLGVKPPRGVLLYGPPGSGKTCIA 258
Query: 431 RALACAASKAGQKVSFYMRKGADVLSKWVGEAERQLKLLFEEAQRNQPSIIFFDEIDGLA 490
RA+A ++ G F++ G +V+SK GEAE L+ FEEA++N P+IIF DEID +A
Sbjct: 259 RAVA---NETG--AFFFLINGPEVMSKMAGEAEANLRRAFEEAEKNSPAIIFIDEIDSIA 313
Query: 491 PVRSSKQEQIHNSIVSTLLALMDGLDSRGQVVLIGATNRVDAIDGALRRPGRFDREFNFP 550
P R ++ +VS LL LMDG+ SRGQVV+I ATNR ++ID ALRR GRFDRE +
Sbjct: 314 PKREKTNGEVERRVVSQLLTLMDGIKSRGQVVVIAATNRQNSIDPALRRFGRFDREIDIG 373
Query: 551 LPGCEARAEILDIHTRKWKQPPSRELKSELAASCVGYCGADLKALCTEAAIRAFREKYPQ 610
+P R EIL IHT+ K P +L+ ELA++ G+ GADL LCTEAA+ REK
Sbjct: 374 VPDDNGRFEILRIHTKNMKLSPDVKLE-ELASNTHGFVGADLAQLCTEAALTCIREKMDV 432
Query: 611 VYTSDDKFLID---VDSVTVEKYHFIEAMSTITPAAHRGATV 649
+ D+ +ID ++S+ V + HF A+ T P++ R V
Sbjct: 433 IDLEDE--IIDKEVLESMCVTQDHFNMALGTCNPSSLRETVV 472
Score = 406 (148.0 bits), Expect = 2.1e-34, P = 2.1e-34
Identities = 91/236 (38%), Positives = 135/236 (57%)
Query: 375 SVSFDDIGGLSEYIDALKEMVFFPLLYPDFFASYHITPPRGVLLCGPPGTGKTLIARALA 434
+V +DDIGGL E L+EM+ +P+ +PD F + ++P RGVL GPPG GKTL+A+A+A
Sbjct: 476 NVKWDDIGGLDEVKSTLREMILYPIDHPDKFEKFGMSPSRGVLFYGPPGCGKTLLAKAVA 535
Query: 435 CAASKAGQKVSFYMRKGADVLSKWVGEAERQLKLLFEEAQRNQPSIIFFDEIDGLAPVRS 494
S +F KG ++L+ W GE+E ++ +F++A+ P ++FFDE+D + R
Sbjct: 536 SECS-----ANFVSIKGPELLTMWFGESEANVREVFDKARAAAPCVLFFDELDSIGTQRG 590
Query: 495 SKQEQ---IHNSIVSTLLALMDGLDSRGQVVLIGATNRVDAIDGALRRPGRFDREFNFPL 551
S + +++ LL +DG+ + + IGATNR + +D AL RPGR D+ PL
Sbjct: 591 SSLGDGSGAGDRVMNQLLTEIDGVGPKKNLFFIGATNRPELLDEALLRPGRLDQLIYIPL 650
Query: 552 PGCEARAEILDIHTRKWKQPPSRELKSE-LAASCVGYCGADLKALCTEAAIRAFRE 606
P AR IL RK P + + + LA G+ GADL LC AA A R+
Sbjct: 651 PDLGARISILTAILRKC--PVAENVPIDFLAQKTAGFSGADLAELCQRAARAAIRD 704
>SGD|S000002284 [details] [associations]
symbol:CDC48 "AAA ATPase involved in multiple processes"
species:4932 "Saccharomyces cerevisiae" [GO:0005829 "cytosol"
evidence=IDA] [GO:0043332 "mating projection tip" evidence=IDA]
[GO:0016887 "ATPase activity" evidence=IDA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0030433 "ER-associated protein catabolic process"
evidence=IMP] [GO:0000837 "Doa10p ubiquitin ligase complex"
evidence=IDA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005783 "endoplasmic reticulum"
evidence=IEA] [GO:0006810 "transport" evidence=IEA] [GO:0007049
"cell cycle" evidence=IEA] [GO:0015031 "protein transport"
evidence=IEA] [GO:0043231 "intracellular membrane-bounded
organelle" evidence=IEA] [GO:1900182 "positive regulation of
protein localization to nucleus" evidence=IMP] [GO:0051228 "mitotic
spindle disassembly" evidence=IMP] [GO:0016320 "endoplasmic
reticulum membrane fusion" evidence=IMP] [GO:0034517 "ribophagy"
evidence=IMP] [GO:0071712 "ER-associated misfolded protein
catabolic process" evidence=IMP] [GO:0030970 "retrograde protein
transport, ER to cytosol" evidence=IMP] [GO:0034098
"Cdc48p-Npl4p-Ufd1p AAA ATPase complex" evidence=IDA] [GO:0043161
"proteasomal ubiquitin-dependent protein catabolic process"
evidence=IMP] [GO:0043130 "ubiquitin binding" evidence=IDA]
[GO:0036266 "Cdc48p-Npl4p-Vms1p AAA ATPase complex" evidence=IDA]
[GO:0071630 "nucleus-associated proteasomal ubiquitin-dependent
protein catabolic process" evidence=IMP] [GO:0034727 "piecemeal
microautophagy of nucleus" evidence=IMP] [GO:0016236
"macroautophagy" evidence=IMP] [GO:0031134 "sister chromatid
biorientation" evidence=IMP] [GO:0005739 "mitochondrion"
evidence=IDA] [GO:0072671 "mitochondria-associated protein
catabolic process" evidence=IMP] [GO:0071629 "cytoplasm-associated
proteasomal ubiquitin-dependent protein catabolic process"
evidence=IMP] [GO:0005789 "endoplasmic reticulum membrane"
evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 InterPro:IPR003338 SGD:S000002284 Pfam:PF02359
GO:GO:0005829 GO:GO:0005524 GO:GO:0005634 GO:GO:0043332
EMBL:BK006938 GO:GO:0016887 eggNOG:COG0464 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 GO:GO:0016236 GO:GO:0031134
GO:GO:0043130 GO:GO:0034727 GO:GO:0016320 GO:GO:0034517
HOGENOM:HOG000223224 KO:K13525 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 OrthoDB:EOG47H8Z3 GO:GO:0034098 GO:GO:0030970
EMBL:X56956 EMBL:Z74174 PIR:S67669 RefSeq:NP_010157.1
ProteinModelPortal:P25694 SMR:P25694 DIP:DIP-2704N IntAct:P25694
MINT:MINT-547129 STRING:P25694 TCDB:3.A.16.1.2 PaxDb:P25694
PeptideAtlas:P25694 PRIDE:P25694 EnsemblFungi:YDL126C GeneID:851431
KEGG:sce:YDL126C CYGD:YDL126c GeneTree:ENSGT00700000104534
OMA:TIPRITW NextBio:968654 Genevestigator:P25694 GermOnline:YDL126C
GO:GO:0036266 GO:GO:0000837 GO:GO:0071629 GO:GO:0071712
GO:GO:0072671 GO:GO:0051228 GO:GO:0071630 GO:GO:1900182
Uniprot:P25694
Length = 835
Score = 587 (211.7 bits), Expect = 5.8e-55, P = 5.8e-55
Identities = 151/400 (37%), Positives = 223/400 (55%)
Query: 376 VSFDDIGGLSEYIDALKEMVFFPLLYPDFFASYHITPPRGVLLCGPPGTGKTLIARALAC 435
V +DDIGG + + ++EMV PL +P F + I PPRGVL+ GPPGTGKTL+ARA+A
Sbjct: 211 VGYDDIGGCRKQMAQIREMVELPLRHPQLFKAIGIKPPRGVLMYGPPGTGKTLMARAVA- 269
Query: 436 AASKAGQKVSFYMRKGADVLSKWVGEAERQLKLLFEEAQRNQPSIIFFDEIDGLAPVRSS 495
++ G F++ G +V+SK GE+E L+ FEEA++N P+IIF DEID +AP R
Sbjct: 270 --NETG--AFFFLINGPEVMSKMAGESESNLRKAFEEAEKNAPAIIFIDEIDSIAPKRDK 325
Query: 496 KQEQIHNSIVSTLLALMDGLDSRGQVVLIGATNRVDAIDGALRRPGRFDREFNFPLPGCE 555
++ +VS LL LMDG+ +R VV+I ATNR ++ID ALRR GRFDRE + +P
Sbjct: 326 TNGEVERRVVSQLLTLMDGMKARSNVVVIAATNRPNSIDPALRRFGRFDREVDIGIPDAT 385
Query: 556 ARAEILDIHTRKWKQPPSRELKSELAASCVGYCGADLKALCTEAAIRAFREKYPQVYTSD 615
R E+L IHT+ K +L++ LAA GY GAD+ +LC+EAA++ REK + +
Sbjct: 386 GRLEVLRIHTKNMKLADDVDLEA-LAAETHGYVGADIASLCSEAAMQQIREKMDLIDLDE 444
Query: 616 DKFLIDV-DSVTVEKYHFIEAMSTITPAAHRGATVHSRPLSLVVAPCLQRHLQKAMNYIS 674
D+ +V DS+ V +F A+ P+A R V S ++ L ++ +
Sbjct: 445 DEIDAEVLDSLGVTMDNFRFALGNSNPSALRETVVESVNVTWDDVGGLDEIKEELKETVE 504
Query: 675 DIFPPLGMSSELTKLCMLSHGSAIPLVYRPRLLLCGSEGTGVDHLGPAILHELEKFPVHS 734
+P L + TK LS + L Y P GTG L A+ E+ +
Sbjct: 505 --YPVLH-PDQYTKFG-LSPSKGV-LFYGP-------PGTGKTLLAKAVATEVSANFISV 552
Query: 735 LGLPALLSDPSAKTPEEALVHIFGEARRTTPSILYIPQFN 774
G P LLS ++ E + IF +AR P+++++ + +
Sbjct: 553 KG-PELLSMWYGES-ESNIRDIFDKARAAAPTVVFLDELD 590
Score = 434 (157.8 bits), Expect = 7.3e-37, Sum P(2) = 7.3e-37
Identities = 98/265 (36%), Positives = 152/265 (57%)
Query: 345 DTLAALTSGIQTAGPSSKGGADIQPLQVDESVSFDDIGGLSEYIDALKEMVFFPLLYPDF 404
D+L + A +S A + + +V++DD+GGL E + LKE V +P+L+PD
Sbjct: 453 DSLGVTMDNFRFALGNSNPSALRETVVESVNVTWDDVGGLDEIKEELKETVEYPVLHPDQ 512
Query: 405 FASYHITPPRGVLLCGPPGTGKTLIARALACAASKAGQKVSFYMRKGADVLSKWVGEAER 464
+ + ++P +GVL GPPGTGKTL+A+A+A S +F KG ++LS W GE+E
Sbjct: 513 YTKFGLSPSKGVLFYGPPGTGKTLLAKAVATEVS-----ANFISVKGPELLSMWYGESES 567
Query: 465 QLKLLFEEAQRNQPSIIFFDEIDGLAPVRSSKQEQIHNS---IVSTLLALMDGLDSRGQV 521
++ +F++A+ P+++F DE+D +A R + +V+ LL MDG++++ V
Sbjct: 568 NIRDIFDKARAAAPTVVFLDELDSIAKARGGSLGDAGGASDRVVNQLLTEMDGMNAKKNV 627
Query: 522 VLIGATNRVDAIDGALRRPGRFDREFNFPLPGCEARAEILDIHTRKWKQPPSRELKSELA 581
+IGATNR D ID A+ RPGR D+ PLP AR IL+ RK P EL + +A
Sbjct: 628 FVIGATNRPDQIDPAILRPGRLDQLIYVPLPDENARLSILNAQLRKTPLEPGLELTA-IA 686
Query: 582 ASCVGYCGADLKALCTEAAIRAFRE 606
+ G+ GADL + AA A ++
Sbjct: 687 KATQGFSGADLLYIVQRAAKYAIKD 711
Score = 42 (19.8 bits), Expect = 7.3e-37, Sum P(2) = 7.3e-37
Identities = 10/19 (52%), Positives = 12/19 (63%)
Query: 621 DVDSVT-VEKYHFIEAMST 638
+VD V + K HF EAM T
Sbjct: 746 EVDPVPYITKEHFAEAMKT 764
>UNIPROTKB|G4N517 [details] [associations]
symbol:MGG_05193 "Cell division control protein 48"
species:242507 "Magnaporthe oryzae 70-15" [GO:0005575
"cellular_component" evidence=ND] [GO:0043581 "mycelium
development" evidence=IEP] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 InterPro:IPR003338 Pfam:PF02359 GO:GO:0005524
GO:GO:0051301 EMBL:CM001233 GO:GO:0017111 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 InterPro:IPR015415 Pfam:PF09336
GO:GO:0043581 KO:K13525 InterPro:IPR004201 PANTHER:PTHR23077:SF18
Pfam:PF02933 SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243
RefSeq:XP_003712735.1 ProteinModelPortal:G4N517 SMR:G4N517
EnsemblFungi:MGG_05193T0 GeneID:2675720 KEGG:mgr:MGG_05193
Uniprot:G4N517
Length = 820
Score = 580 (209.2 bits), Expect = 3.0e-54, P = 3.0e-54
Identities = 157/420 (37%), Positives = 230/420 (54%)
Query: 368 QPLQVDES------VSFDDIGGLSEYIDALKEMVFFPLLYPDFFASYHITPPRGVLLCGP 421
+P+Q DE V +DDIGG + + ++EMV PL +P F S I PPRGVLL GP
Sbjct: 205 EPIQRDEEENNLNEVGYDDIGGCRKQMAQIREMVELPLRHPQLFKSIGIKPPRGVLLYGP 264
Query: 422 PGTGKTLIARALACAASKAGQKVSFYMRKGADVLSKWVGEAERQLKLLFEEAQRNQPSII 481
PGTGKTL+ARA+A ++ G F++ G +++SK GE+E L+ FEEA++N P+II
Sbjct: 265 PGTGKTLMARAVA---NETG--AFFFLINGPEIMSKMAGESESNLRKAFEEAEKNSPAII 319
Query: 482 FFDEIDGLAPVRSSKQEQIHNSIVSTLLALMDGLDSRGQVVLIGATNRVDAIDGALRRPG 541
F DEID +AP R ++ +VS LL LMDG+ +R VV++ ATNR ++ID ALRR G
Sbjct: 320 FIDEIDSIAPKREKTNGEVERRVVSQLLTLMDGMKARSNVVVMAATNRPNSIDPALRRFG 379
Query: 542 RFDREFNFPLPGCEARAEILDIHTRKWKQPPSRELKSELAASCVGYCGADLKALCTEAAI 601
RFDRE + +P R EIL IHT+ K +L+ ++AA GY G+D+ ALC+EAA+
Sbjct: 380 RFDREVDIGIPDPTGRLEILQIHTKNMKLGDDVDLE-QIAAETHGYVGSDVAALCSEAAM 438
Query: 602 RAFREKYPQVYTSDDKFLIDV-DS--VTVEKYHFIEAMSTITPAAHRGATVHSRPL---- 654
+ REK + +D +V DS VT+E + F A+ P+A R V P
Sbjct: 439 QQIREKMDLIDLDEDTIDAEVLDSLGVTMENFRF--ALGVSNPSALREVAVVEVPNVRWE 496
Query: 655 SLVVAPCLQRHLQKAMNYISDIFPPLGMSSELTKLCMLSHGSAIPLVYRPRLLLCGSEGT 714
+ +++ L++ + Y P+ + K LS + L Y P GT
Sbjct: 497 DIGGLDEVKQDLREQVQY------PVDHPEKFLKFG-LSPSRGV-LFYGP-------PGT 541
Query: 715 GVDHLGPAILHELEKFPVHSLGLPALLSDPSAKTPEEALVHIFGEARRTTPSILYIPQFN 774
G L A+ +E + G P LLS ++ E + IF +AR P I+++ + +
Sbjct: 542 GKTMLAKAVANECAANFISVKG-PELLSMWFGES-ESNIRDIFDKARAAAPCIVFLDELD 599
Score = 385 (140.6 bits), Expect = 4.0e-32, P = 4.0e-32
Identities = 98/270 (36%), Positives = 151/270 (55%)
Query: 344 GDTLAALTSGIQTAGPSSKGGADIQPLQVDESVSFDDIGGLSEYIDALKEMVFFPLLYPD 403
G T+ + + PS+ ++ ++V +V ++DIGGL E L+E V +P+ +P+
Sbjct: 464 GVTMENFRFALGVSNPSAL--REVAVVEVP-NVRWEDIGGLDEVKQDLREQVQYPVDHPE 520
Query: 404 FFASYHITPPRGVLLCGPPGTGKTLIARALA--CAASKAGQKVSFYMRKGADVLSKWVGE 461
F + ++P RGVL GPPGTGKT++A+A+A CAA+ F KG ++LS W GE
Sbjct: 521 KFLKFGLSPSRGVLFYGPPGTGKTMLAKAVANECAAN-------FISVKGPELLSMWFGE 573
Query: 462 AERQLKLLFEEAQRNQPSIIFFDEIDGLAPVRSSKQEQIHNS---IVSTLLALMDGLDSR 518
+E ++ +F++A+ P I+F DE+D +A R + +V+ LL MDG+ S+
Sbjct: 574 SESNIRDIFDKARAAAPCIVFLDELDSIAKARGGSVGDAGGASDRVVNQLLTEMDGMTSK 633
Query: 519 GQVVLIGATNRVDAIDGALRRPGRFDREFNFPLPGCEARAEILDIHTRKWKQPPSRELKS 578
V +IGATNR + +D AL RPGR D PLP R IL RK P S ++
Sbjct: 634 KNVFVIGATNRPEQLDPALCRPGRLDSLIYVPLPDELGRLSILKAQLRK--TPVSDDVDL 691
Query: 579 ELAASCV-GYCGADLKALCTEAAIR-AFRE 606
+ A+ G+ GADL T+ A++ A +E
Sbjct: 692 QYIANKTHGFSGADL-GFITQRAVKIAIKE 720
>ZFIN|ZDB-GENE-030131-5408 [details] [associations]
symbol:vcp "valosin containing protein"
species:7955 "Danio rerio" [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0006974 "response to DNA
damage stimulus" evidence=IEA;ISS] [GO:0016567 "protein
ubiquitination" evidence=ISS] [GO:0035861 "site of double-strand
break" evidence=ISS] [GO:0006302 "double-strand break repair"
evidence=ISS] [GO:0018279 "protein N-linked glycosylation via
asparagine" evidence=ISS] [GO:0019985 "translesion synthesis"
evidence=ISS] [GO:0030433 "ER-associated protein catabolic process"
evidence=ISS] [GO:0009790 "embryo development" evidence=IMP]
[GO:2000058 "regulation of protein ubiquitination involved in
ubiquitin-dependent protein catabolic process" evidence=IMP]
[GO:0005634 "nucleus" evidence=IEA] [GO:0006810 "transport"
evidence=IEA] [GO:0008289 "lipid binding" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA]
[GO:0007049 "cell cycle" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 InterPro:IPR003338 Pfam:PF02359
ZFIN:ZDB-GENE-030131-5408 GO:GO:0005829 GO:GO:0005524 GO:GO:0005634
GO:GO:0006810 EMBL:CR318632 GO:GO:0016567 GO:GO:0007049
GO:GO:0008289 GO:GO:0030433 GO:GO:0006302 HSSP:Q01853
eggNOG:COG0464 GO:GO:0017111 GO:GO:0018279 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 InterPro:IPR015415 Pfam:PF09336
HOGENOM:HOG000223224 KO:K13525 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 OMA:AYRPIHK GeneTree:ENSGT00700000104534
GO:GO:0035861 GO:GO:0019985 CTD:7415 OrthoDB:EOG45TCMK
EMBL:AB093594 EMBL:AY576993 EMBL:BC050488 EMBL:BC067384
IPI:IPI00505091 RefSeq:NP_958889.1 UniGene:Dr.75122
ProteinModelPortal:Q7ZU99 SMR:Q7ZU99 STRING:Q7ZU99 PRIDE:Q7ZU99
Ensembl:ENSDART00000023779 GeneID:327197 KEGG:dre:327197
InParanoid:Q76KA4 NextBio:20809924 Bgee:Q7ZU99 Uniprot:Q7ZU99
Length = 806
Score = 575 (207.5 bits), Expect = 8.4e-54, P = 8.4e-54
Identities = 150/404 (37%), Positives = 223/404 (55%)
Query: 376 VSFDDIGGLSEYIDALKEMVFFPLLYPDFFASYHITPPRGVLLCGPPGTGKTLIARALAC 435
V +DDIGG+ + + +KEMV PL +P F + + PPRG+LL GPPGTGKTLIARA+A
Sbjct: 201 VGYDDIGGVRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILLYGPPGTGKTLIARAVA- 259
Query: 436 AASKAGQKVSFYMRKGADVLSKWVGEAERQLKLLFEEAQRNQPSIIFFDEIDGLAPVRSS 495
++ G F++ G +++SK GE+E L+ FEEA++N P+IIF DE+D +AP R
Sbjct: 260 --NETG--AFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPAIIFIDELDAIAPKREK 315
Query: 496 KQEQIHNSIVSTLLALMDGLDSRGQVVLIGATNRVDAIDGALRRPGRFDREFNFPLPGCE 555
++ IVS LL LMDGL R V+++ ATNR ++ID ALRR GRFDRE + +P
Sbjct: 316 THGEVERRIVSQLLTLMDGLKQRAHVIVMAATNRPNSIDPALRRFGRFDREVDIGIPDAT 375
Query: 556 ARAEILDIHTRKWKQPPSRELKSELAASCVGYCGADLKALCTEAAIRAFREKYPQVYTSD 615
R EIL IHT+ K +L+ ++A G+ GADL ALC+EAA++A R+K + D
Sbjct: 376 GRLEILQIHTKNMKLADDVDLE-QVANETHGHVGADLAALCSEAALQAIRKKMDLIDLED 434
Query: 616 DKFLIDV-DSVTVEKYHFIEAMSTITPAAHRGATVHSRPLS---LVVAPCLQRHLQKAMN 671
+ +V +S+ V F A+S P+A R V ++ + ++R LQ+ +
Sbjct: 435 ETIDAEVMNSLAVTMDDFRWALSQSNPSALRETVVEVPNITWEDIGGLDDVKRELQELVQ 494
Query: 672 YISDIFPPLGMSSELTKLCML-SHGSAIPLVYRPRLLLCGSEGTGVDHLGPAILHELEKF 730
Y P+ + K M S G +L G G G L AI +E +
Sbjct: 495 Y------PVEHPDKFLKFGMTPSKG----------VLFYGPPGCGKTLLAKAIANECQAN 538
Query: 731 PVHSLGLPALLSDPSAKTPEEALVHIFGEARRTTPSILYIPQFN 774
+ G P LL+ ++ E + IF +AR+ P +L+ + +
Sbjct: 539 FISIKG-PELLTMWFGES-EANVREIFDKARQAAPCVLFFDELD 580
Score = 414 (150.8 bits), Expect = 6.6e-35, Sum P(2) = 6.6e-35
Identities = 97/275 (35%), Positives = 154/275 (56%)
Query: 375 SVSFDDIGGLSEYIDALKEMVFFPLLYPDFFASYHITPPRGVLLCGPPGTGKTLIARALA 434
+++++DIGGL + L+E+V +P+ +PD F + +TP +GVL GPPG GKTL+A+A+A
Sbjct: 473 NITWEDIGGLDDVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIA 532
Query: 435 CAASKAGQKVSFYMRKGADVLSKWVGEAERQLKLLFEEAQRNQPSIIFFDEIDGLAPVRS 494
+ +F KG ++L+ W GE+E ++ +F++A++ P ++FFDE+D +A R
Sbjct: 533 NEC-----QANFISIKGPELLTMWFGESEANVREIFDKARQAAPCVLFFDELDSIAKARG 587
Query: 495 SKQEQ---IHNSIVSTLLALMDGLDSRGQVVLIGATNRVDAIDGALRRPGRFDREFNFPL 551
+ +++ +L MDG+ S+ V +IGATNR D ID A+ RPGR D+ PL
Sbjct: 588 GNVGDGGGAADRVINQILTEMDGMSSKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPL 647
Query: 552 PGCEARAEILDIHTRKWKQPPSRELKSELAASCV-GYCGADLKALCTEAAIRAFREKYP- 609
P ++R IL + RK P S+++ + A G+ GADL +C A A RE
Sbjct: 648 PDEKSRIAILKANLRK--SPISKDVDLDFLAKMTNGFSGADLTEICQRACKLAIRESIEN 705
Query: 610 ------QVYTSDDKFLIDVDSVTVE--KYHFIEAM 636
+ T+ ++ D E K HF EAM
Sbjct: 706 EIRRERERQTNPSAMEVEEDDPVPEIRKDHFEEAM 740
Score = 44 (20.5 bits), Expect = 6.6e-35, Sum P(2) = 6.6e-35
Identities = 17/55 (30%), Positives = 28/55 (50%)
Query: 335 VAASGWGHQGDTLAALTSGIQTAGPSSKGGADIQPLQVDESVSFDDIGGLSEYID 389
VA GH G LAAL S + A + + D+ L+ DE++ + + L+ +D
Sbjct: 399 VANETHGHVGADLAALCS--EAALQAIRKKMDLIDLE-DETIDAEVMNSLAVTMD 450
>FB|FBgn0261014 [details] [associations]
symbol:TER94 "TER94" species:7227 "Drosophila melanogaster"
[GO:0045169 "fusome" evidence=IDA;NAS] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0016887 "ATPase activity" evidence=NAS]
[GO:0005783 "endoplasmic reticulum" evidence=NAS] [GO:0007030
"Golgi organization" evidence=IMP] [GO:0007317 "regulation of pole
plasm oskar mRNA localization" evidence=IMP] [GO:0016320
"endoplasmic reticulum membrane fusion" evidence=ISS] [GO:0000226
"microtubule cytoskeleton organization" evidence=IMP] [GO:0007029
"endoplasmic reticulum organization" evidence=IMP] [GO:0045451
"pole plasm oskar mRNA localization" evidence=IMP] [GO:0008103
"oocyte microtubule cytoskeleton polarization" evidence=IMP]
[GO:0008104 "protein localization" evidence=IMP] [GO:0042052
"rhabdomere development" evidence=IMP] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0032436 "positive regulation of
proteasomal ubiquitin-dependent protein catabolic process"
evidence=IMP] [GO:0000502 "proteasome complex" evidence=NAS]
[GO:0006508 "proteolysis" evidence=IMP] [GO:0005811 "lipid
particle" evidence=IDA] [GO:0005875 "microtubule associated
complex" evidence=IDA] [GO:0030433 "ER-associated protein catabolic
process" evidence=IMP] [GO:0006200 "ATP catabolic process"
evidence=IGI] [GO:0048813 "dendrite morphogenesis" evidence=IMP]
[GO:0043523 "regulation of neuron apoptotic process" evidence=IMP]
[GO:0005515 "protein binding" evidence=IPI] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IMP]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 Pfam:PF02359 EMBL:AE013599 GO:GO:0007275
GO:GO:0005524 GO:GO:0005634 GO:GO:0005875 GO:GO:0000226
GO:GO:0030154 GO:GO:0005811 GO:GO:0006810 GO:GO:0006200
GO:GO:0048477 GO:GO:0030433 GO:GO:0000502 eggNOG:COG0464
GO:GO:0017111 Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
GO:GO:0032436 InterPro:IPR015415 Pfam:PF09336 GO:GO:0007030
GO:GO:0007029 GO:GO:0016320 GO:GO:0045169 KO:K13525
InterPro:IPR004201 PANTHER:PTHR23077:SF18 Pfam:PF02933
SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243
GeneTree:ENSGT00700000104534 GO:GO:0007317 EMBL:AF047037
EMBL:AF202034 EMBL:AF132553 RefSeq:NP_001097249.1
RefSeq:NP_001097250.1 RefSeq:NP_477369.1 UniGene:Dm.2968
ProteinModelPortal:Q7KN62 SMR:Q7KN62 IntAct:Q7KN62 STRING:Q7KN62
PaxDb:Q7KN62 PRIDE:Q7KN62 EnsemblMetazoa:FBtr0088391 GeneID:36040
KEGG:dme:Dmel_CG2331 UCSC:CG2331-RA CTD:36040 FlyBase:FBgn0261014
InParanoid:Q7KN62 OMA:RRGTDVN OrthoDB:EOG4TX96S GenomeRNAi:36040
NextBio:796507 Bgee:Q7KN62 Uniprot:Q7KN62
Length = 801
Score = 573 (206.8 bits), Expect = 1.3e-53, P = 1.3e-53
Identities = 147/405 (36%), Positives = 223/405 (55%)
Query: 375 SVSFDDIGGLSEYIDALKEMVFFPLLYPDFFASYHITPPRGVLLCGPPGTGKTLIARALA 434
+V +DDIGG + + +KEMV PL +P F + + PPRG+L+ GPPGTGKTLIARA+A
Sbjct: 197 AVGYDDIGGCRKQLAQIKEMVELPLRHPSLFKAIGVKPPRGILMYGPPGTGKTLIARAVA 256
Query: 435 CAASKAGQKVSFYMRKGADVLSKWVGEAERQLKLLFEEAQRNQPSIIFFDEIDGLAPVRS 494
++ G F++ G +++SK GE+E L+ FEEA++N P+IIF DEID +AP R
Sbjct: 257 ---NETG--AFFFLINGPEIMSKLAGESESNLRKAFEEAEKNSPAIIFIDEIDAIAPKRD 311
Query: 495 SKQEQIHNSIVSTLLALMDGLDSRGQVVLIGATNRVDAIDGALRRPGRFDREFNFPLPGC 554
++ IVS LL LMDG+ ++++ ATNR ++ID ALRR GRFDRE + +P
Sbjct: 312 KTHGEVERRIVSQLLTLMDGMKKSSHLIVMAATNRPNSIDPALRRFGRFDREIDIGIPDA 371
Query: 555 EARAEILDIHTRKWKQPPSRELKSELAASCVGYCGADLKALCTEAAIRAFREKYPQVYTS 614
R E+L IHT+ K +L+ ++AA G+ GADL +LC+EAA++ REK +
Sbjct: 372 TGRLEVLRIHTKNMKLHDDVDLE-QIAAESHGHVGADLASLCSEAALQQIREKMDLIDLE 430
Query: 615 DDKFLIDV-DSVTVEKYHFIEAMSTITPAAHRGATV---HSRPLSLVVAPCLQRHLQKAM 670
DDK +V S+ V +F AM+ +P+A R V ++ + +++ LQ+ +
Sbjct: 431 DDKIDAEVLASLAVTMENFRYAMTKSSPSALRETVVEVPNTTWTDIGGLESVKKELQELV 490
Query: 671 NYISDIFPPLGMSSELTKLCML-SHGSAIPLVYRPRLLLCGSEGTGVDHLGPAILHELEK 729
Y P+ + K M S G +L G G G L AI +E +
Sbjct: 491 QY------PVEHPDKFLKFGMQPSRG----------VLFYGPPGCGKTLLAKAIANECQA 534
Query: 730 FPVHSLGLPALLSDPSAKTPEEALVHIFGEARRTTPSILYIPQFN 774
+ G P LL+ ++ E + IF +AR P +L+ + +
Sbjct: 535 NFISVKG-PELLTMWFGES-EANVRDIFDKARSAAPCVLFFDELD 577
Score = 391 (142.7 bits), Expect = 5.1e-32, Sum P(2) = 5.1e-32
Identities = 86/236 (36%), Positives = 137/236 (58%)
Query: 375 SVSFDDIGGLSEYIDALKEMVFFPLLYPDFFASYHITPPRGVLLCGPPGTGKTLIARALA 434
+ ++ DIGGL L+E+V +P+ +PD F + + P RGVL GPPG GKTL+A+A+A
Sbjct: 470 NTTWTDIGGLESVKKELQELVQYPVEHPDKFLKFGMQPSRGVLFYGPPGCGKTLLAKAIA 529
Query: 435 CAASKAGQKVSFYMRKGADVLSKWVGEAERQLKLLFEEAQRNQPSIIFFDEIDGLAPVRS 494
+ +F KG ++L+ W GE+E ++ +F++A+ P ++FFDE+D +A R
Sbjct: 530 NEC-----QANFISVKGPELLTMWFGESEANVRDIFDKARSAAPCVLFFDELDSIAKARG 584
Query: 495 SKQEQIHNS---IVSTLLALMDGLDSRGQVVLIGATNRVDAIDGALRRPGRFDREFNFPL 551
+ +++ +L MDG+ ++ V +IGATNR D ID A+ RPGR D+ PL
Sbjct: 585 GNVGDAGGAADRVINQILTEMDGMGAKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPL 644
Query: 552 PGCEARAEILDIHTRKWKQPPSRELK-SELAASCVGYCGADLKALCTEAAIRAFRE 606
P ++R IL + RK P ++E+ + +A G+ GADL +C A A R+
Sbjct: 645 PDDKSREAILKANLRK--SPLAKEVDLTYIAKVTQGFSGADLTEICQRACKLAIRQ 698
Score = 41 (19.5 bits), Expect = 5.1e-32, Sum P(2) = 5.1e-32
Identities = 14/51 (27%), Positives = 25/51 (49%)
Query: 335 VAASGWGHQGDTLAALTSGIQTAGPSSKGGADIQPLQVDESVSFDDIGGLS 385
+AA GH G LA+L S + A + D+ L+ D+ + + + L+
Sbjct: 396 IAAESHGHVGADLASLCS--EAALQQIREKMDLIDLE-DDKIDAEVLASLA 443
>UNIPROTKB|G3X757 [details] [associations]
symbol:VCP "Transitional endoplasmic reticulum ATPase"
species:9913 "Bos taurus" [GO:0070842 "aggresome assembly"
evidence=IEA] [GO:0045732 "positive regulation of protein catabolic
process" evidence=IEA] [GO:0035861 "site of double-strand break"
evidence=IEA] [GO:0031593 "polyubiquitin binding" evidence=IEA]
[GO:0031334 "positive regulation of protein complex assembly"
evidence=IEA] [GO:0030970 "retrograde protein transport, ER to
cytosol" evidence=IEA] [GO:0019904 "protein domain specific
binding" evidence=IEA] [GO:0019903 "protein phosphatase binding"
evidence=IEA] [GO:0018279 "protein N-linked glycosylation via
asparagine" evidence=IEA] [GO:0006919 "activation of cysteine-type
endopeptidase activity involved in apoptotic process" evidence=IEA]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0006302 "double-strand break repair"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0000502 "proteasome complex"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 Pfam:PF02359 GO:GO:0005524 GO:GO:0005634
GO:GO:0005737 GO:GO:0031334 GO:GO:0006919 GO:GO:0006302
GO:GO:0000502 GO:GO:0006511 GO:GO:0017111 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 InterPro:IPR015415 Pfam:PF09336
GO:GO:0045732 InterPro:IPR004201 PANTHER:PTHR23077:SF18
Pfam:PF02933 SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243
OMA:AYRPIHK GO:GO:0030970 GeneTree:ENSGT00700000104534
GO:GO:0070842 UniGene:Bt.49331 EMBL:DAAA02023126
ProteinModelPortal:G3X757 Ensembl:ENSBTAT00000019970 Uniprot:G3X757
Length = 806
Score = 573 (206.8 bits), Expect = 1.6e-53, P = 1.6e-53
Identities = 151/404 (37%), Positives = 221/404 (54%)
Query: 376 VSFDDIGGLSEYIDALKEMVFFPLLYPDFFASYHITPPRGVLLCGPPGTGKTLIARALAC 435
V +DDIGG + + +KEMV PL +P F + + PPRG+LL GPPGTGKTLIARA+A
Sbjct: 201 VGYDDIGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILLYGPPGTGKTLIARAVA- 259
Query: 436 AASKAGQKVSFYMRKGADVLSKWVGEAERQLKLLFEEAQRNQPSIIFFDEIDGLAPVRSS 495
++ G F++ G +++SK GE+E L+ FEEA++N P+IIF DE+D +AP R
Sbjct: 260 --NETG--AFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPAIIFIDELDAIAPKREK 315
Query: 496 KQEQIHNSIVSTLLALMDGLDSRGQVVLIGATNRVDAIDGALRRPGRFDREFNFPLPGCE 555
++ IVS LL LMDGL R V+++ ATNR ++ID ALRR GRFDRE + +P
Sbjct: 316 THGEVERRIVSQLLTLMDGLKQRAHVIVMAATNRPNSIDPALRRFGRFDREVDIGIPDAT 375
Query: 556 ARAEILDIHTRKWKQPPSRELKSELAASCVGYCGADLKALCTEAAIRAFREKYPQVYTSD 615
R EIL IHT+ K +L+ ++A G+ GADL ALC+EAA++A R+K + D
Sbjct: 376 GRLEILQIHTKNMKLADDVDLE-QVANETHGHVGADLAALCSEAALQAIRKKMDLIDLED 434
Query: 616 DKFLIDV-DSVTVEKYHFIEAMSTITPAAHRGATVHSRPLSLVVAPCLQ---RHLQKAMN 671
+ +V +S+ V F A+S P+A R V ++ L+ R LQ+ +
Sbjct: 435 ETIDAEVMNSLAVTMDDFRWALSQSNPSALRETVVEVPQVTWEDIGGLEDVKRELQELVQ 494
Query: 672 YISDIFPPLGMSSELTKLCML-SHGSAIPLVYRPRLLLCGSEGTGVDHLGPAILHELEKF 730
Y P+ + K M S G +L G G G L AI +E +
Sbjct: 495 Y------PVEHPDKFLKFGMTPSKG----------VLFYGPPGCGKTLLAKAIANECQAN 538
Query: 731 PVHSLGLPALLSDPSAKTPEEALVHIFGEARRTTPSILYIPQFN 774
+ G P LL+ ++ E + IF +AR+ P +L+ + +
Sbjct: 539 FISIKG-PELLTMWFGES-EANVREIFDKARQAAPCVLFFDELD 580
Score = 410 (149.4 bits), Expect = 1.9e-34, Sum P(2) = 1.9e-34
Identities = 88/235 (37%), Positives = 140/235 (59%)
Query: 376 VSFDDIGGLSEYIDALKEMVFFPLLYPDFFASYHITPPRGVLLCGPPGTGKTLIARALAC 435
V+++DIGGL + L+E+V +P+ +PD F + +TP +GVL GPPG GKTL+A+A+A
Sbjct: 474 VTWEDIGGLEDVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIAN 533
Query: 436 AASKAGQKVSFYMRKGADVLSKWVGEAERQLKLLFEEAQRNQPSIIFFDEIDGLAPVRSS 495
+ +F KG ++L+ W GE+E ++ +F++A++ P ++FFDE+D +A R
Sbjct: 534 EC-----QANFISIKGPELLTMWFGESEANVREIFDKARQAAPCVLFFDELDSIAKARGG 588
Query: 496 KQEQ---IHNSIVSTLLALMDGLDSRGQVVLIGATNRVDAIDGALRRPGRFDREFNFPLP 552
+ +++ +L MDG+ ++ V +IGATNR D ID A+ RPGR D+ PLP
Sbjct: 589 NIGDGGGAADRVINQILTEMDGMSTKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPLP 648
Query: 553 GCEARAEILDIHTRKWKQPPSRELKSELAASCV-GYCGADLKALCTEAAIRAFRE 606
++R IL + RK P ++++ E A G+ GADL +C A A RE
Sbjct: 649 DEKSRVAILKANLRK--SPVAKDVDLEFLAKMTNGFSGADLTEICQRACKLAIRE 701
Score = 44 (20.5 bits), Expect = 1.9e-34, Sum P(2) = 1.9e-34
Identities = 17/55 (30%), Positives = 28/55 (50%)
Query: 335 VAASGWGHQGDTLAALTSGIQTAGPSSKGGADIQPLQVDESVSFDDIGGLSEYID 389
VA GH G LAAL S + A + + D+ L+ DE++ + + L+ +D
Sbjct: 399 VANETHGHVGADLAALCS--EAALQAIRKKMDLIDLE-DETIDAEVMNSLAVTMD 450
>UNIPROTKB|Q3ZBT1 [details] [associations]
symbol:VCP "Transitional endoplasmic reticulum ATPase"
species:9913 "Bos taurus" [GO:0019985 "translesion synthesis"
evidence=ISS] [GO:0016567 "protein ubiquitination" evidence=ISS]
[GO:0006974 "response to DNA damage stimulus" evidence=ISS]
[GO:0006302 "double-strand break repair" evidence=ISS] [GO:0035861
"site of double-strand break" evidence=ISS] [GO:0018279 "protein
N-linked glycosylation via asparagine" evidence=ISS] [GO:0030433
"ER-associated protein catabolic process" evidence=ISS] [GO:0005829
"cytosol" evidence=IEA] [GO:0005783 "endoplasmic reticulum"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0008289
"lipid binding" evidence=IEA] [GO:0006810 "transport" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 Pfam:PF02359 GO:GO:0005783 GO:GO:0005829
GO:GO:0005524 GO:GO:0005634 GO:GO:0006810 GO:GO:0016567
GO:GO:0008289 GO:GO:0030433 GO:GO:0006302 HSSP:Q01853
eggNOG:COG0464 GO:GO:0017111 GO:GO:0018279 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 InterPro:IPR015415 Pfam:PF09336
HOGENOM:HOG000223224 KO:K13525 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 GO:GO:0035861 GO:GO:0019985 HOVERGEN:HBG001226
EMBL:BC103125 IPI:IPI00710727 RefSeq:NP_001029466.1
UniGene:Bt.49331 ProteinModelPortal:Q3ZBT1 SMR:Q3ZBT1 IntAct:Q3ZBT1
STRING:Q3ZBT1 PRIDE:Q3ZBT1 GeneID:507345 KEGG:bta:507345 CTD:7415
InParanoid:Q3ZBT1 OrthoDB:EOG45TCMK NextBio:20868019 Uniprot:Q3ZBT1
Length = 806
Score = 573 (206.8 bits), Expect = 1.6e-53, P = 1.6e-53
Identities = 151/404 (37%), Positives = 221/404 (54%)
Query: 376 VSFDDIGGLSEYIDALKEMVFFPLLYPDFFASYHITPPRGVLLCGPPGTGKTLIARALAC 435
V +DDIGG + + +KEMV PL +P F + + PPRG+LL GPPGTGKTLIARA+A
Sbjct: 201 VGYDDIGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILLYGPPGTGKTLIARAVA- 259
Query: 436 AASKAGQKVSFYMRKGADVLSKWVGEAERQLKLLFEEAQRNQPSIIFFDEIDGLAPVRSS 495
++ G F++ G +++SK GE+E L+ FEEA++N P+IIF DE+D +AP R
Sbjct: 260 --NETG--AFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPAIIFIDELDAIAPKREK 315
Query: 496 KQEQIHNSIVSTLLALMDGLDSRGQVVLIGATNRVDAIDGALRRPGRFDREFNFPLPGCE 555
++ IVS LL LMDGL R V+++ ATNR ++ID ALRR GRFDRE + +P
Sbjct: 316 THGEVERRIVSQLLTLMDGLKQRAHVIVMAATNRPNSIDPALRRFGRFDREVDIGIPDAT 375
Query: 556 ARAEILDIHTRKWKQPPSRELKSELAASCVGYCGADLKALCTEAAIRAFREKYPQVYTSD 615
R EIL IHT+ K +L+ ++A G+ GADL ALC+EAA++A R+K + D
Sbjct: 376 GRLEILQIHTKNMKLADDVDLE-QVANETHGHVGADLAALCSEAALQAIRKKMDLIDLED 434
Query: 616 DKFLIDV-DSVTVEKYHFIEAMSTITPAAHRGATVHSRPLSLVVAPCLQ---RHLQKAMN 671
+ +V +S+ V F A+S P+A R V ++ L+ R LQ+ +
Sbjct: 435 ETIDAEVMNSLAVTMDDFRWALSQSNPSALRETVVEVPQVTWEDIGGLEDVKRELQELVQ 494
Query: 672 YISDIFPPLGMSSELTKLCML-SHGSAIPLVYRPRLLLCGSEGTGVDHLGPAILHELEKF 730
Y P+ + K M S G +L G G G L AI +E +
Sbjct: 495 Y------PVEHPDKFLKFGMTPSKG----------VLFYGPPGCGKTLLAKAIANECQAN 538
Query: 731 PVHSLGLPALLSDPSAKTPEEALVHIFGEARRTTPSILYIPQFN 774
+ G P LL+ ++ E + IF +AR+ P +L+ + +
Sbjct: 539 FISIKG-PELLTMWFGES-EANVREIFDKARQAAPCVLFFDELD 580
Score = 410 (149.4 bits), Expect = 1.9e-34, Sum P(2) = 1.9e-34
Identities = 88/235 (37%), Positives = 140/235 (59%)
Query: 376 VSFDDIGGLSEYIDALKEMVFFPLLYPDFFASYHITPPRGVLLCGPPGTGKTLIARALAC 435
V+++DIGGL + L+E+V +P+ +PD F + +TP +GVL GPPG GKTL+A+A+A
Sbjct: 474 VTWEDIGGLEDVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIAN 533
Query: 436 AASKAGQKVSFYMRKGADVLSKWVGEAERQLKLLFEEAQRNQPSIIFFDEIDGLAPVRSS 495
+ +F KG ++L+ W GE+E ++ +F++A++ P ++FFDE+D +A R
Sbjct: 534 EC-----QANFISIKGPELLTMWFGESEANVREIFDKARQAAPCVLFFDELDSIAKARGG 588
Query: 496 KQEQ---IHNSIVSTLLALMDGLDSRGQVVLIGATNRVDAIDGALRRPGRFDREFNFPLP 552
+ +++ +L MDG+ ++ V +IGATNR D ID A+ RPGR D+ PLP
Sbjct: 589 NIGDGGGAADRVINQILTEMDGMSTKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPLP 648
Query: 553 GCEARAEILDIHTRKWKQPPSRELKSELAASCV-GYCGADLKALCTEAAIRAFRE 606
++R IL + RK P ++++ E A G+ GADL +C A A RE
Sbjct: 649 DEKSRVAILKANLRK--SPVAKDVDLEFLAKMTNGFSGADLTEICQRACKLAIRE 701
Score = 44 (20.5 bits), Expect = 1.9e-34, Sum P(2) = 1.9e-34
Identities = 17/55 (30%), Positives = 28/55 (50%)
Query: 335 VAASGWGHQGDTLAALTSGIQTAGPSSKGGADIQPLQVDESVSFDDIGGLSEYID 389
VA GH G LAAL S + A + + D+ L+ DE++ + + L+ +D
Sbjct: 399 VANETHGHVGADLAALCS--EAALQAIRKKMDLIDLE-DETIDAEVMNSLAVTMD 450
>UNIPROTKB|P55072 [details] [associations]
symbol:VCP "Transitional endoplasmic reticulum ATPase"
species:9606 "Homo sapiens" [GO:0008289 "lipid binding"
evidence=IEA] [GO:0005102 "receptor binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0006888 "ER to Golgi
vesicle-mediated transport" evidence=IEA] [GO:0032403 "protein
complex binding" evidence=IEA] [GO:0042802 "identical protein
binding" evidence=IEA] [GO:0051260 "protein homooligomerization"
evidence=IEA] [GO:0070842 "aggresome assembly" evidence=IEA]
[GO:0043231 "intracellular membrane-bounded organelle"
evidence=ISS] [GO:0006919 "activation of cysteine-type
endopeptidase activity involved in apoptotic process" evidence=ISS]
[GO:0006281 "DNA repair" evidence=NAS] [GO:0006974 "response to DNA
damage stimulus" evidence=IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005634 "nucleus" evidence=IDA;TAS] [GO:0005829
"cytosol" evidence=IDA] [GO:0006302 "double-strand break repair"
evidence=IDA] [GO:0019904 "protein domain specific binding"
evidence=IPI] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=NAS] [GO:0030970 "retrograde protein
transport, ER to cytosol" evidence=IDA] [GO:0030433 "ER-associated
protein catabolic process" evidence=IMP;TAS] [GO:0030968
"endoplasmic reticulum unfolded protein response" evidence=TAS]
[GO:0016887 "ATPase activity" evidence=TAS] [GO:0005783
"endoplasmic reticulum" evidence=IDA] [GO:0016567 "protein
ubiquitination" evidence=IDA;NAS] [GO:0042981 "regulation of
apoptotic process" evidence=TAS] [GO:0045184 "establishment of
protein localization" evidence=TAS] [GO:0019985 "translesion
synthesis" evidence=IMP] [GO:0035861 "site of double-strand break"
evidence=IDA] [GO:0018279 "protein N-linked glycosylation via
asparagine" evidence=IMP] [GO:0032436 "positive regulation of
proteasomal ubiquitin-dependent protein catabolic process"
evidence=IDA] [GO:0000502 "proteasome complex" evidence=IDA]
[GO:0019903 "protein phosphatase binding" evidence=IPI] [GO:0045732
"positive regulation of protein catabolic process" evidence=IDA]
[GO:0031334 "positive regulation of protein complex assembly"
evidence=IDA] [GO:0031593 "polyubiquitin binding" evidence=IDA]
[GO:0005730 "nucleolus" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 InterPro:IPR003338 Pfam:PF02359 GO:GO:0005783
GO:GO:0005829 GO:GO:0005524 GO:GO:0005634 GO:GO:0031334
GO:GO:0051260 GO:GO:0016887 GO:GO:0016567 GO:GO:0008289
GO:GO:0006919 EMBL:CH471071 GO:GO:0030433 GO:GO:0006302
GO:GO:0000502 eggNOG:COG0464 GO:GO:0018279 GO:GO:0031593
GO:GO:0006888 Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
GO:GO:0032436 InterPro:IPR015415 Pfam:PF09336 Orphanet:803 PDB:3TIW
PDBsum:3TIW GO:GO:0030968 HOGENOM:HOG000223224 KO:K13525
InterPro:IPR004201 PANTHER:PTHR23077:SF18 Pfam:PF02933
SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243 OMA:AYRPIHK
GO:GO:0030970 TCDB:3.A.16.1.1 GO:GO:0070842 GO:GO:0035861
GO:GO:0019985 EMBL:AC004472 EMBL:AL353795 PDB:3QC8 PDB:3QQ8
PDB:3QWZ PDBsum:3QC8 PDBsum:3QQ8 PDBsum:3QWZ HOVERGEN:HBG001226
PDB:3EBB PDBsum:3EBB CTD:7415 OrthoDB:EOG45TCMK EMBL:AF100752
EMBL:AK312310 EMBL:BC110913 EMBL:BC121794 EMBL:Z70768
IPI:IPI00022774 PIR:T02243 RefSeq:NP_009057.1 UniGene:Hs.529782
PDB:3HU1 PDB:3HU2 PDB:3HU3 PDB:3QQ7 PDBsum:3HU1 PDBsum:3HU2
PDBsum:3HU3 PDBsum:3QQ7 ProteinModelPortal:P55072 SMR:P55072
DIP:DIP-33543N IntAct:P55072 MINT:MINT-272884 STRING:P55072
PhosphoSite:P55072 DMDM:6094447 DOSAC-COBS-2DPAGE:P55072 OGP:P55072
REPRODUCTION-2DPAGE:IPI00022774 REPRODUCTION-2DPAGE:P55072
PaxDb:P55072 PRIDE:P55072 Ensembl:ENST00000358901 GeneID:7415
KEGG:hsa:7415 UCSC:uc003zvy.2 GeneCards:GC09M035056 HGNC:HGNC:12666
HPA:CAB005593 HPA:HPA012728 HPA:HPA012814 MIM:167320 MIM:601023
MIM:613954 neXtProt:NX_P55072 Orphanet:52430 PharmGKB:PA37289
InParanoid:P55072 BindingDB:P55072 ChEMBL:CHEMBL1075145 ChiTaRS:VCP
EvolutionaryTrace:P55072 GenomeRNAi:7415 NextBio:29034
ArrayExpress:P55072 Bgee:P55072 CleanEx:HS_VCP
Genevestigator:P55072 GermOnline:ENSG00000165280 Uniprot:P55072
Length = 806
Score = 573 (206.8 bits), Expect = 1.6e-53, P = 1.6e-53
Identities = 151/404 (37%), Positives = 221/404 (54%)
Query: 376 VSFDDIGGLSEYIDALKEMVFFPLLYPDFFASYHITPPRGVLLCGPPGTGKTLIARALAC 435
V +DDIGG + + +KEMV PL +P F + + PPRG+LL GPPGTGKTLIARA+A
Sbjct: 201 VGYDDIGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILLYGPPGTGKTLIARAVA- 259
Query: 436 AASKAGQKVSFYMRKGADVLSKWVGEAERQLKLLFEEAQRNQPSIIFFDEIDGLAPVRSS 495
++ G F++ G +++SK GE+E L+ FEEA++N P+IIF DE+D +AP R
Sbjct: 260 --NETG--AFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPAIIFIDELDAIAPKREK 315
Query: 496 KQEQIHNSIVSTLLALMDGLDSRGQVVLIGATNRVDAIDGALRRPGRFDREFNFPLPGCE 555
++ IVS LL LMDGL R V+++ ATNR ++ID ALRR GRFDRE + +P
Sbjct: 316 THGEVERRIVSQLLTLMDGLKQRAHVIVMAATNRPNSIDPALRRFGRFDREVDIGIPDAT 375
Query: 556 ARAEILDIHTRKWKQPPSRELKSELAASCVGYCGADLKALCTEAAIRAFREKYPQVYTSD 615
R EIL IHT+ K +L+ ++A G+ GADL ALC+EAA++A R+K + D
Sbjct: 376 GRLEILQIHTKNMKLADDVDLE-QVANETHGHVGADLAALCSEAALQAIRKKMDLIDLED 434
Query: 616 DKFLIDV-DSVTVEKYHFIEAMSTITPAAHRGATVHSRPLSLVVAPCLQ---RHLQKAMN 671
+ +V +S+ V F A+S P+A R V ++ L+ R LQ+ +
Sbjct: 435 ETIDAEVMNSLAVTMDDFRWALSQSNPSALRETVVEVPQVTWEDIGGLEDVKRELQELVQ 494
Query: 672 YISDIFPPLGMSSELTKLCML-SHGSAIPLVYRPRLLLCGSEGTGVDHLGPAILHELEKF 730
Y P+ + K M S G +L G G G L AI +E +
Sbjct: 495 Y------PVEHPDKFLKFGMTPSKG----------VLFYGPPGCGKTLLAKAIANECQAN 538
Query: 731 PVHSLGLPALLSDPSAKTPEEALVHIFGEARRTTPSILYIPQFN 774
+ G P LL+ ++ E + IF +AR+ P +L+ + +
Sbjct: 539 FISIKG-PELLTMWFGES-EANVREIFDKARQAAPCVLFFDELD 580
Score = 410 (149.4 bits), Expect = 1.9e-34, Sum P(2) = 1.9e-34
Identities = 88/235 (37%), Positives = 140/235 (59%)
Query: 376 VSFDDIGGLSEYIDALKEMVFFPLLYPDFFASYHITPPRGVLLCGPPGTGKTLIARALAC 435
V+++DIGGL + L+E+V +P+ +PD F + +TP +GVL GPPG GKTL+A+A+A
Sbjct: 474 VTWEDIGGLEDVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIAN 533
Query: 436 AASKAGQKVSFYMRKGADVLSKWVGEAERQLKLLFEEAQRNQPSIIFFDEIDGLAPVRSS 495
+ +F KG ++L+ W GE+E ++ +F++A++ P ++FFDE+D +A R
Sbjct: 534 EC-----QANFISIKGPELLTMWFGESEANVREIFDKARQAAPCVLFFDELDSIAKARGG 588
Query: 496 KQEQ---IHNSIVSTLLALMDGLDSRGQVVLIGATNRVDAIDGALRRPGRFDREFNFPLP 552
+ +++ +L MDG+ ++ V +IGATNR D ID A+ RPGR D+ PLP
Sbjct: 589 NIGDGGGAADRVINQILTEMDGMSTKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPLP 648
Query: 553 GCEARAEILDIHTRKWKQPPSRELKSELAASCV-GYCGADLKALCTEAAIRAFRE 606
++R IL + RK P ++++ E A G+ GADL +C A A RE
Sbjct: 649 DEKSRVAILKANLRK--SPVAKDVDLEFLAKMTNGFSGADLTEICQRACKLAIRE 701
Score = 44 (20.5 bits), Expect = 1.9e-34, Sum P(2) = 1.9e-34
Identities = 17/55 (30%), Positives = 28/55 (50%)
Query: 335 VAASGWGHQGDTLAALTSGIQTAGPSSKGGADIQPLQVDESVSFDDIGGLSEYID 389
VA GH G LAAL S + A + + D+ L+ DE++ + + L+ +D
Sbjct: 399 VANETHGHVGADLAALCS--EAALQAIRKKMDLIDLE-DETIDAEVMNSLAVTMD 450
>MGI|MGI:99919 [details] [associations]
symbol:Vcp "valosin containing protein" species:10090 "Mus
musculus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0000502 "proteasome complex" evidence=ISO] [GO:0005102
"receptor binding" evidence=ISO] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005524 "ATP binding" evidence=ISO] [GO:0005634
"nucleus" evidence=ISO] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0005783 "endoplasmic reticulum" evidence=ISO] [GO:0005829
"cytosol" evidence=ISO] [GO:0006200 "ATP catabolic process"
evidence=ISO] [GO:0006281 "DNA repair" evidence=IEA] [GO:0006302
"double-strand break repair" evidence=ISO] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IGI]
[GO:0006810 "transport" evidence=IEA] [GO:0006888 "ER to Golgi
vesicle-mediated transport" evidence=ISO] [GO:0006919 "activation
of cysteine-type endopeptidase activity involved in apoptotic
process" evidence=IDA] [GO:0006974 "response to DNA damage
stimulus" evidence=ISO] [GO:0008289 "lipid binding" evidence=IEA]
[GO:0016567 "protein ubiquitination" evidence=ISO] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0016887 "ATPase activity"
evidence=ISO] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0018279 "protein N-linked glycosylation via
asparagine" evidence=ISO] [GO:0019903 "protein phosphatase binding"
evidence=ISO] [GO:0019904 "protein domain specific binding"
evidence=ISO] [GO:0019985 "translesion synthesis" evidence=ISO]
[GO:0030433 "ER-associated protein catabolic process" evidence=ISO]
[GO:0030970 "retrograde protein transport, ER to cytosol"
evidence=ISO] [GO:0031334 "positive regulation of protein complex
assembly" evidence=ISO] [GO:0031593 "polyubiquitin binding"
evidence=ISO;IDA] [GO:0032403 "protein complex binding"
evidence=ISO] [GO:0032436 "positive regulation of proteasomal
ubiquitin-dependent protein catabolic process" evidence=ISO]
[GO:0035861 "site of double-strand break" evidence=ISO] [GO:0042802
"identical protein binding" evidence=ISO] [GO:0043231
"intracellular membrane-bounded organelle" evidence=ISO]
[GO:0043234 "protein complex" evidence=IPI] [GO:0043531 "ADP
binding" evidence=ISO] [GO:0045732 "positive regulation of protein
catabolic process" evidence=ISO] [GO:0051260 "protein
homooligomerization" evidence=ISO] [GO:0070842 "aggresome assembly"
evidence=IGI] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 InterPro:IPR003338 MGI:MGI:99919 Pfam:PF02359
GO:GO:0005783 GO:GO:0005829 GO:GO:0005524 GO:GO:0005634
GO:GO:0043234 GO:GO:0031334 GO:GO:0051260 GO:GO:0016887
GO:GO:0016567 GO:GO:0008289 GO:GO:0006919 GO:GO:0030433
GO:GO:0006302 GO:GO:0000502 eggNOG:COG0464 GO:GO:0018279
GO:GO:0031593 GO:GO:0006888 Gene3D:2.40.40.20 InterPro:IPR009010
SUPFAM:SSF50692 GO:GO:0032436 InterPro:IPR015415 Pfam:PF09336
KO:K13525 InterPro:IPR004201 PANTHER:PTHR23077:SF18 Pfam:PF02933
SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243 OMA:AYRPIHK
GO:GO:0030970 GeneTree:ENSGT00700000104534 EMBL:AL672276
GO:GO:0070842 GO:GO:0035861 GO:GO:0019985 PDB:2PJH PDBsum:2PJH
PDB:1S3S PDBsum:1S3S HOVERGEN:HBG001226 CTD:7415 OrthoDB:EOG45TCMK
ChiTaRS:VCP EMBL:Z14044 EMBL:AK028264 EMBL:AK030751 EMBL:AK149931
EMBL:AK151109 EMBL:AK151418 EMBL:AK153249 EMBL:AK159177
EMBL:AK159509 EMBL:AK167794 EMBL:AK169140 EMBL:BC043053
EMBL:BC049114 IPI:IPI00622235 PIR:S25197 RefSeq:NP_033529.3
UniGene:Mm.245976 PDB:1E32 PDB:1R7R PDB:3CF0 PDB:3CF1 PDB:3CF2
PDB:3CF3 PDBsum:1E32 PDBsum:1R7R PDBsum:3CF0 PDBsum:3CF1
PDBsum:3CF2 PDBsum:3CF3 DisProt:DP00435 ProteinModelPortal:Q01853
SMR:Q01853 DIP:DIP-29796N IntAct:Q01853 MINT:MINT-220770
STRING:Q01853 PhosphoSite:Q01853 REPRODUCTION-2DPAGE:Q01853
UCD-2DPAGE:Q01853 PaxDb:Q01853 PRIDE:Q01853
Ensembl:ENSMUST00000030164 GeneID:269523 KEGG:mmu:269523
UCSC:uc008sor.2 InParanoid:Q01853 BindingDB:Q01853
EvolutionaryTrace:Q01853 NextBio:392876 Bgee:Q01853 CleanEx:MM_VCP
Genevestigator:Q01853 GermOnline:ENSMUSG00000028452 Uniprot:Q01853
Length = 806
Score = 573 (206.8 bits), Expect = 1.6e-53, P = 1.6e-53
Identities = 151/404 (37%), Positives = 221/404 (54%)
Query: 376 VSFDDIGGLSEYIDALKEMVFFPLLYPDFFASYHITPPRGVLLCGPPGTGKTLIARALAC 435
V +DDIGG + + +KEMV PL +P F + + PPRG+LL GPPGTGKTLIARA+A
Sbjct: 201 VGYDDIGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILLYGPPGTGKTLIARAVA- 259
Query: 436 AASKAGQKVSFYMRKGADVLSKWVGEAERQLKLLFEEAQRNQPSIIFFDEIDGLAPVRSS 495
++ G F++ G +++SK GE+E L+ FEEA++N P+IIF DE+D +AP R
Sbjct: 260 --NETG--AFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPAIIFIDELDAIAPKREK 315
Query: 496 KQEQIHNSIVSTLLALMDGLDSRGQVVLIGATNRVDAIDGALRRPGRFDREFNFPLPGCE 555
++ IVS LL LMDGL R V+++ ATNR ++ID ALRR GRFDRE + +P
Sbjct: 316 THGEVERRIVSQLLTLMDGLKQRAHVIVMAATNRPNSIDPALRRFGRFDREVDIGIPDAT 375
Query: 556 ARAEILDIHTRKWKQPPSRELKSELAASCVGYCGADLKALCTEAAIRAFREKYPQVYTSD 615
R EIL IHT+ K +L+ ++A G+ GADL ALC+EAA++A R+K + D
Sbjct: 376 GRLEILQIHTKNMKLADDVDLE-QVANETHGHVGADLAALCSEAALQAIRKKMDLIDLED 434
Query: 616 DKFLIDV-DSVTVEKYHFIEAMSTITPAAHRGATVHSRPLSLVVAPCLQ---RHLQKAMN 671
+ +V +S+ V F A+S P+A R V ++ L+ R LQ+ +
Sbjct: 435 ETIDAEVMNSLAVTMDDFRWALSQSNPSALRETVVEVPQVTWEDIGGLEDVKRELQELVQ 494
Query: 672 YISDIFPPLGMSSELTKLCML-SHGSAIPLVYRPRLLLCGSEGTGVDHLGPAILHELEKF 730
Y P+ + K M S G +L G G G L AI +E +
Sbjct: 495 Y------PVEHPDKFLKFGMTPSKG----------VLFYGPPGCGKTLLAKAIANECQAN 538
Query: 731 PVHSLGLPALLSDPSAKTPEEALVHIFGEARRTTPSILYIPQFN 774
+ G P LL+ ++ E + IF +AR+ P +L+ + +
Sbjct: 539 FISIKG-PELLTMWFGES-EANVREIFDKARQAAPCVLFFDELD 580
Score = 410 (149.4 bits), Expect = 1.9e-34, Sum P(2) = 1.9e-34
Identities = 88/235 (37%), Positives = 140/235 (59%)
Query: 376 VSFDDIGGLSEYIDALKEMVFFPLLYPDFFASYHITPPRGVLLCGPPGTGKTLIARALAC 435
V+++DIGGL + L+E+V +P+ +PD F + +TP +GVL GPPG GKTL+A+A+A
Sbjct: 474 VTWEDIGGLEDVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIAN 533
Query: 436 AASKAGQKVSFYMRKGADVLSKWVGEAERQLKLLFEEAQRNQPSIIFFDEIDGLAPVRSS 495
+ +F KG ++L+ W GE+E ++ +F++A++ P ++FFDE+D +A R
Sbjct: 534 EC-----QANFISIKGPELLTMWFGESEANVREIFDKARQAAPCVLFFDELDSIAKARGG 588
Query: 496 KQEQ---IHNSIVSTLLALMDGLDSRGQVVLIGATNRVDAIDGALRRPGRFDREFNFPLP 552
+ +++ +L MDG+ ++ V +IGATNR D ID A+ RPGR D+ PLP
Sbjct: 589 NIGDGGGAADRVINQILTEMDGMSTKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPLP 648
Query: 553 GCEARAEILDIHTRKWKQPPSRELKSELAASCV-GYCGADLKALCTEAAIRAFRE 606
++R IL + RK P ++++ E A G+ GADL +C A A RE
Sbjct: 649 DEKSRVAILKANLRK--SPVAKDVDLEFLAKMTNGFSGADLTEICQRACKLAIRE 701
Score = 44 (20.5 bits), Expect = 1.9e-34, Sum P(2) = 1.9e-34
Identities = 17/55 (30%), Positives = 28/55 (50%)
Query: 335 VAASGWGHQGDTLAALTSGIQTAGPSSKGGADIQPLQVDESVSFDDIGGLSEYID 389
VA GH G LAAL S + A + + D+ L+ DE++ + + L+ +D
Sbjct: 399 VANETHGHVGADLAALCS--EAALQAIRKKMDLIDLE-DETIDAEVMNSLAVTMD 450
>RGD|621595 [details] [associations]
symbol:Vcp "valosin-containing protein" species:10116 "Rattus
norvegicus" [GO:0000502 "proteasome complex" evidence=IEA;ISO]
[GO:0005102 "receptor binding" evidence=IDA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005524 "ATP binding" evidence=IDA;IMP]
[GO:0005634 "nucleus" evidence=IEA;ISO] [GO:0005737 "cytoplasm"
evidence=ISO] [GO:0005783 "endoplasmic reticulum" evidence=ISO;IDA]
[GO:0005829 "cytosol" evidence=ISO;IDA] [GO:0006200 "ATP catabolic
process" evidence=IDA] [GO:0006302 "double-strand break repair"
evidence=ISO;ISS] [GO:0006511 "ubiquitin-dependent protein
catabolic process" evidence=ISO] [GO:0006888 "ER to Golgi
vesicle-mediated transport" evidence=IMP] [GO:0006919 "activation
of cysteine-type endopeptidase activity involved in apoptotic
process" evidence=IEA;ISO] [GO:0006974 "response to DNA damage
stimulus" evidence=ISO;ISS] [GO:0008289 "lipid binding"
evidence=IEA] [GO:0016567 "protein ubiquitination"
evidence=ISO;ISS] [GO:0016887 "ATPase activity" evidence=IDA]
[GO:0018279 "protein N-linked glycosylation via asparagine"
evidence=ISO;ISS] [GO:0019903 "protein phosphatase binding"
evidence=IEA;ISO] [GO:0019904 "protein domain specific binding"
evidence=IEA;ISO] [GO:0019985 "translesion synthesis"
evidence=ISO;ISS] [GO:0030433 "ER-associated protein catabolic
process" evidence=ISO;ISS] [GO:0030970 "retrograde protein
transport, ER to cytosol" evidence=IEA;ISO] [GO:0031334 "positive
regulation of protein complex assembly" evidence=IEA;ISO]
[GO:0031593 "polyubiquitin binding" evidence=IEA;ISO] [GO:0032403
"protein complex binding" evidence=IPI] [GO:0032436 "positive
regulation of proteasomal ubiquitin-dependent protein catabolic
process" evidence=ISO;IMP] [GO:0035861 "site of double-strand
break" evidence=ISO;ISS] [GO:0042802 "identical protein binding"
evidence=IDA] [GO:0043231 "intracellular membrane-bounded
organelle" evidence=IDA] [GO:0043234 "protein complex"
evidence=ISO] [GO:0043531 "ADP binding" evidence=IMP] [GO:0045732
"positive regulation of protein catabolic process" evidence=ISO]
[GO:0051260 "protein homooligomerization" evidence=IDA] [GO:0070842
"aggresome assembly" evidence=IEA;ISO] [GO:0005730 "nucleolus"
evidence=ISO] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 InterPro:IPR003338 RGD:621595 Pfam:PF02359
GO:GO:0005783 GO:GO:0005829 GO:GO:0005524 GO:GO:0005634
GO:GO:0031334 GO:GO:0051260 GO:GO:0005102 GO:GO:0016887
GO:GO:0016567 GO:GO:0042802 GO:GO:0008289 GO:GO:0006919
GO:GO:0030433 GO:GO:0006302 GO:GO:0000502 eggNOG:COG0464
GO:GO:0018279 GO:GO:0006888 Gene3D:2.40.40.20 InterPro:IPR009010
SUPFAM:SSF50692 GO:GO:0032436 InterPro:IPR015415 Pfam:PF09336
HOGENOM:HOG000223224 KO:K13525 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 GO:GO:0030970 GeneTree:ENSGT00700000104534
GO:GO:0070842 GO:GO:0035861 GO:GO:0019985 HOVERGEN:HBG001226
CTD:7415 OrthoDB:EOG45TCMK EMBL:U11760 EMBL:BC060518
IPI:IPI00212014 PIR:A55190 RefSeq:NP_446316.1 UniGene:Rn.98891
ProteinModelPortal:P46462 SMR:P46462 IntAct:P46462
MINT:MINT-1954391 STRING:P46462 PhosphoSite:P46462
World-2DPAGE:0004:P46462 PRIDE:P46462 Ensembl:ENSRNOT00000046102
GeneID:116643 KEGG:rno:116643 UCSC:RGD:621595 InParanoid:P46462
NextBio:619375 Genevestigator:P46462 GermOnline:ENSRNOG00000034242
Uniprot:P46462
Length = 806
Score = 573 (206.8 bits), Expect = 1.6e-53, P = 1.6e-53
Identities = 151/404 (37%), Positives = 221/404 (54%)
Query: 376 VSFDDIGGLSEYIDALKEMVFFPLLYPDFFASYHITPPRGVLLCGPPGTGKTLIARALAC 435
V +DDIGG + + +KEMV PL +P F + + PPRG+LL GPPGTGKTLIARA+A
Sbjct: 201 VGYDDIGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILLYGPPGTGKTLIARAVA- 259
Query: 436 AASKAGQKVSFYMRKGADVLSKWVGEAERQLKLLFEEAQRNQPSIIFFDEIDGLAPVRSS 495
++ G F++ G +++SK GE+E L+ FEEA++N P+IIF DE+D +AP R
Sbjct: 260 --NETG--AFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPAIIFIDELDAIAPKREK 315
Query: 496 KQEQIHNSIVSTLLALMDGLDSRGQVVLIGATNRVDAIDGALRRPGRFDREFNFPLPGCE 555
++ IVS LL LMDGL R V+++ ATNR ++ID ALRR GRFDRE + +P
Sbjct: 316 THGEVERRIVSQLLTLMDGLKQRAHVIVMAATNRPNSIDPALRRFGRFDREVDIGIPDAT 375
Query: 556 ARAEILDIHTRKWKQPPSRELKSELAASCVGYCGADLKALCTEAAIRAFREKYPQVYTSD 615
R EIL IHT+ K +L+ ++A G+ GADL ALC+EAA++A R+K + D
Sbjct: 376 GRLEILQIHTKNMKLADDVDLE-QVANETHGHVGADLAALCSEAALQAIRKKMDLIDLED 434
Query: 616 DKFLIDV-DSVTVEKYHFIEAMSTITPAAHRGATVHSRPLSLVVAPCLQ---RHLQKAMN 671
+ +V +S+ V F A+S P+A R V ++ L+ R LQ+ +
Sbjct: 435 ETIDAEVMNSLAVTMDDFRWALSQSNPSALRETVVEVPQVTWEDIGGLEDVKRELQELVQ 494
Query: 672 YISDIFPPLGMSSELTKLCML-SHGSAIPLVYRPRLLLCGSEGTGVDHLGPAILHELEKF 730
Y P+ + K M S G +L G G G L AI +E +
Sbjct: 495 Y------PVEHPDKFLKFGMTPSKG----------VLFYGPPGCGKTLLAKAIANECQAN 538
Query: 731 PVHSLGLPALLSDPSAKTPEEALVHIFGEARRTTPSILYIPQFN 774
+ G P LL+ ++ E + IF +AR+ P +L+ + +
Sbjct: 539 FISIKG-PELLTMWFGES-EANVREIFDKARQAAPCVLFFDELD 580
Score = 410 (149.4 bits), Expect = 1.9e-34, Sum P(2) = 1.9e-34
Identities = 88/235 (37%), Positives = 140/235 (59%)
Query: 376 VSFDDIGGLSEYIDALKEMVFFPLLYPDFFASYHITPPRGVLLCGPPGTGKTLIARALAC 435
V+++DIGGL + L+E+V +P+ +PD F + +TP +GVL GPPG GKTL+A+A+A
Sbjct: 474 VTWEDIGGLEDVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIAN 533
Query: 436 AASKAGQKVSFYMRKGADVLSKWVGEAERQLKLLFEEAQRNQPSIIFFDEIDGLAPVRSS 495
+ +F KG ++L+ W GE+E ++ +F++A++ P ++FFDE+D +A R
Sbjct: 534 EC-----QANFISIKGPELLTMWFGESEANVREIFDKARQAAPCVLFFDELDSIAKARGG 588
Query: 496 KQEQ---IHNSIVSTLLALMDGLDSRGQVVLIGATNRVDAIDGALRRPGRFDREFNFPLP 552
+ +++ +L MDG+ ++ V +IGATNR D ID A+ RPGR D+ PLP
Sbjct: 589 NIGDGGGAADRVINQILTEMDGMSTKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPLP 648
Query: 553 GCEARAEILDIHTRKWKQPPSRELKSELAASCV-GYCGADLKALCTEAAIRAFRE 606
++R IL + RK P ++++ E A G+ GADL +C A A RE
Sbjct: 649 DEKSRVAILKANLRK--SPVAKDVDLEFLAKMTNGFSGADLTEICQRACKLAIRE 701
Score = 44 (20.5 bits), Expect = 1.9e-34, Sum P(2) = 1.9e-34
Identities = 17/55 (30%), Positives = 28/55 (50%)
Query: 335 VAASGWGHQGDTLAALTSGIQTAGPSSKGGADIQPLQVDESVSFDDIGGLSEYID 389
VA GH G LAAL S + A + + D+ L+ DE++ + + L+ +D
Sbjct: 399 VANETHGHVGADLAALCS--EAALQAIRKKMDLIDLE-DETIDAEVMNSLAVTMD 450
>UNIPROTKB|F1SIH8 [details] [associations]
symbol:VCP "Transitional endoplasmic reticulum ATPase"
species:9823 "Sus scrofa" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 Pfam:PF02359 GO:GO:0005524 GO:GO:0017111
Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
InterPro:IPR015415 Pfam:PF09336 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 OMA:DIRRYEE GeneTree:ENSGT00700000104534
EMBL:FP102396 Ensembl:ENSSSCT00000005837 ArrayExpress:F1SIH8
Uniprot:F1SIH8
Length = 808
Score = 573 (206.8 bits), Expect = 1.7e-53, P = 1.7e-53
Identities = 151/404 (37%), Positives = 221/404 (54%)
Query: 376 VSFDDIGGLSEYIDALKEMVFFPLLYPDFFASYHITPPRGVLLCGPPGTGKTLIARALAC 435
V +DDIGG + + +KEMV PL +P F + + PPRG+LL GPPGTGKTLIARA+A
Sbjct: 201 VGYDDIGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILLYGPPGTGKTLIARAVA- 259
Query: 436 AASKAGQKVSFYMRKGADVLSKWVGEAERQLKLLFEEAQRNQPSIIFFDEIDGLAPVRSS 495
++ G F++ G +++SK GE+E L+ FEEA++N P+IIF DE+D +AP R
Sbjct: 260 --NETG--AFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPAIIFIDELDAIAPKREK 315
Query: 496 KQEQIHNSIVSTLLALMDGLDSRGQVVLIGATNRVDAIDGALRRPGRFDREFNFPLPGCE 555
++ IVS LL LMDGL R V+++ ATNR ++ID ALRR GRFDRE + +P
Sbjct: 316 THGEVERRIVSQLLTLMDGLKQRAHVIVMAATNRPNSIDPALRRFGRFDREVDIGIPDAT 375
Query: 556 ARAEILDIHTRKWKQPPSRELKSELAASCVGYCGADLKALCTEAAIRAFREKYPQVYTSD 615
R EIL IHT+ K +L+ ++A G+ GADL ALC+EAA++A R+K + D
Sbjct: 376 GRLEILQIHTKNMKLADDVDLE-QVANETHGHVGADLAALCSEAALQAIRKKMDLIDLED 434
Query: 616 DKFLIDV-DSVTVEKYHFIEAMSTITPAAHRGATVHSRPLSLVVAPCLQ---RHLQKAMN 671
+ +V +S+ V F A+S P+A R V ++ L+ R LQ+ +
Sbjct: 435 ETIDAEVMNSLAVTMDDFRWALSQSNPSALRETVVEVPQVTWEDIGGLEDVKRELQELVQ 494
Query: 672 YISDIFPPLGMSSELTKLCML-SHGSAIPLVYRPRLLLCGSEGTGVDHLGPAILHELEKF 730
Y P+ + K M S G +L G G G L AI +E +
Sbjct: 495 Y------PVEHPDKFLKFGMTPSKG----------VLFYGPPGCGKTLLAKAIANECQAN 538
Query: 731 PVHSLGLPALLSDPSAKTPEEALVHIFGEARRTTPSILYIPQFN 774
+ G P LL+ ++ E + IF +AR+ P +L+ + +
Sbjct: 539 FISIKG-PELLTMWFGES-EANVREIFDKARQAAPCVLFFDELD 580
Score = 404 (147.3 bits), Expect = 9.0e-34, Sum P(2) = 9.0e-34
Identities = 87/235 (37%), Positives = 138/235 (58%)
Query: 376 VSFDDIGGLSEYIDALKEMVFFPLLYPDFFASYHITPPRGVLLCGPPGTGKTLIARALAC 435
V+++DIGGL + L+E+V +P+ +PD F + +TP +GVL GPPG GKTL+A+A+A
Sbjct: 474 VTWEDIGGLEDVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIAN 533
Query: 436 AASKAGQKVSFYMRKGADVLSKWVGEAERQLKLLFEEAQRNQPSIIFFDEIDGLAPVRSS 495
+ +F KG ++L+ W GE+E ++ +F++A++ P ++FFDE+D +A R
Sbjct: 534 EC-----QANFISIKGPELLTMWFGESEANVREIFDKARQAAPCVLFFDELDSIAKARGG 588
Query: 496 KQEQ---IHNSIVSTLLALMDGLDSRGQVVLIGATNRVDAIDGALRRPGRFDREFNFPLP 552
+ +++ +L MDG+ ++ V +IGATNR D ID A+ RPGR D+ PLP
Sbjct: 589 NIGDGGGAADRVINQILTEMDGMSTKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPLP 648
Query: 553 GCEARAEILDIHTRKWKQPPSRELKSELAASCV-GYCGADLKALCTEAAIRAFRE 606
++R IL + RK + ++ E A G+ GADL +C A A RE
Sbjct: 649 DEKSRVAILKANLRKSPVAKAGDVDLEFLAKMTNGFSGADLTEICQRACKLAIRE 703
Score = 44 (20.5 bits), Expect = 9.0e-34, Sum P(2) = 9.0e-34
Identities = 17/55 (30%), Positives = 28/55 (50%)
Query: 335 VAASGWGHQGDTLAALTSGIQTAGPSSKGGADIQPLQVDESVSFDDIGGLSEYID 389
VA GH G LAAL S + A + + D+ L+ DE++ + + L+ +D
Sbjct: 399 VANETHGHVGADLAALCS--EAALQAIRKKMDLIDLE-DETIDAEVMNSLAVTMD 450
>UNIPROTKB|Q6GL04 [details] [associations]
symbol:vcp "Transitional endoplasmic reticulum ATPase"
species:8364 "Xenopus (Silurana) tropicalis" [GO:0000785
"chromatin" evidence=ISS] [GO:0005634 "nucleus" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISS] [GO:0006200 "ATP catabolic
process" evidence=ISS] [GO:0006302 "double-strand break repair"
evidence=ISS] [GO:0006974 "response to DNA damage stimulus"
evidence=ISS] [GO:0016567 "protein ubiquitination" evidence=ISS]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0018279 "protein
N-linked glycosylation via asparagine" evidence=ISS] [GO:0019985
"translesion synthesis" evidence=ISS] [GO:0030433 "ER-associated
protein catabolic process" evidence=ISS] [GO:0032403 "protein
complex binding" evidence=ISS] [GO:0034214 "protein hexamerization"
evidence=ISS] [GO:0035861 "site of double-strand break"
evidence=ISS] [GO:0035101 "FACT complex" evidence=ISS]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 Pfam:PF02359 GO:GO:0005829 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0032403 GO:GO:0006810
GO:GO:0000785 GO:GO:0016887 GO:GO:0016567 GO:GO:0008289
GO:GO:0030433 GO:GO:0006302 HSSP:Q01853 eggNOG:COG0464
GO:GO:0018279 Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
InterPro:IPR015415 Pfam:PF09336 HOGENOM:HOG000223224 KO:K13525
InterPro:IPR004201 PANTHER:PTHR23077:SF18 Pfam:PF02933
SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243 GO:GO:0034214
GO:GO:0035861 GO:GO:0019985 CTD:7415 OrthoDB:EOG45TCMK
EMBL:BC074716 RefSeq:NP_001005677.1 UniGene:Str.1287
ProteinModelPortal:Q6GL04 SMR:Q6GL04 STRING:Q6GL04 PRIDE:Q6GL04
GeneID:448177 KEGG:xtr:448177 Xenbase:XB-GENE-969573
InParanoid:Q6GL04 Uniprot:Q6GL04
Length = 805
Score = 572 (206.4 bits), Expect = 2.0e-53, P = 2.0e-53
Identities = 151/404 (37%), Positives = 221/404 (54%)
Query: 376 VSFDDIGGLSEYIDALKEMVFFPLLYPDFFASYHITPPRGVLLCGPPGTGKTLIARALAC 435
V +DDIGG + + +KEMV PL +P F + + PPRG+LL GPPGTGKTLIARA+A
Sbjct: 201 VGYDDIGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILLYGPPGTGKTLIARAVA- 259
Query: 436 AASKAGQKVSFYMRKGADVLSKWVGEAERQLKLLFEEAQRNQPSIIFFDEIDGLAPVRSS 495
++ G F++ G +++SK GE+E L+ FEEA++N P+IIF DE+D +AP R
Sbjct: 260 --NETG--AFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPAIIFIDELDAIAPKREK 315
Query: 496 KQEQIHNSIVSTLLALMDGLDSRGQVVLIGATNRVDAIDGALRRPGRFDREFNFPLPGCE 555
++ IVS LL LMDGL R V+++ ATNR ++ID ALRR GRFDRE + +P
Sbjct: 316 THGEVERRIVSQLLTLMDGLKQRAHVIVMAATNRPNSIDPALRRFGRFDREVDIGIPDST 375
Query: 556 ARAEILDIHTRKWKQPPSRELKSELAASCVGYCGADLKALCTEAAIRAFREKYPQVYTSD 615
R EIL IHT+ K +L+ ++A G+ GADL ALC+EAA++A R+K + D
Sbjct: 376 GRLEILQIHTKNMKLSDDVDLE-QVANETHGHVGADLAALCSEAALQAIRKKMDLIDLED 434
Query: 616 DKFLIDV-DSVTVEKYHFIEAMSTITPAAHRGATVHSRPLSLVVAPCLQ---RHLQKAMN 671
+ +V +S+ V F A+S P+A R V ++ L+ R LQ+ +
Sbjct: 435 ETIDAEVMNSLAVTMDDFRWALSQSNPSALRETVVEVPQVTWEDIGGLEDVKRELQELVQ 494
Query: 672 YISDIFPPLGMSSELTKLCML-SHGSAIPLVYRPRLLLCGSEGTGVDHLGPAILHELEKF 730
Y P+ + K M S G +L G G G L AI +E +
Sbjct: 495 Y------PVEHPDKFLKFGMTPSKG----------VLFYGPPGCGKTLLAKAIANECQAN 538
Query: 731 PVHSLGLPALLSDPSAKTPEEALVHIFGEARRTTPSILYIPQFN 774
+ G P LL+ ++ E + IF +AR+ P +L+ + +
Sbjct: 539 FISIKG-PELLTMWFGES-EANVREIFDKARQAAPCVLFFDELD 580
Score = 406 (148.0 bits), Expect = 5.2e-34, Sum P(2) = 5.2e-34
Identities = 87/235 (37%), Positives = 140/235 (59%)
Query: 376 VSFDDIGGLSEYIDALKEMVFFPLLYPDFFASYHITPPRGVLLCGPPGTGKTLIARALAC 435
V+++DIGGL + L+E+V +P+ +PD F + +TP +GVL GPPG GKTL+A+A+A
Sbjct: 474 VTWEDIGGLEDVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIAN 533
Query: 436 AASKAGQKVSFYMRKGADVLSKWVGEAERQLKLLFEEAQRNQPSIIFFDEIDGLAPVRSS 495
+ +F KG ++L+ W GE+E ++ +F++A++ P ++FFDE+D +A R
Sbjct: 534 EC-----QANFISIKGPELLTMWFGESEANVREIFDKARQAAPCVLFFDELDSIAKARGG 588
Query: 496 KQEQ---IHNSIVSTLLALMDGLDSRGQVVLIGATNRVDAIDGALRRPGRFDREFNFPLP 552
+ +++ +L MDG+ ++ V +IGATNR D ID A+ RPGR D+ PLP
Sbjct: 589 NIGDGGGAADRVINQILTEMDGMSTKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPLP 648
Query: 553 GCEARAEILDIHTRKWKQPPSRELKSELAASCV-GYCGADLKALCTEAAIRAFRE 606
++R IL + RK P ++++ + A G+ GADL +C A A RE
Sbjct: 649 DEKSRIAILKANLRK--SPVAKDVDLDFLAKMTNGFSGADLTEICQRACKLAIRE 701
Score = 44 (20.5 bits), Expect = 5.2e-34, Sum P(2) = 5.2e-34
Identities = 17/55 (30%), Positives = 28/55 (50%)
Query: 335 VAASGWGHQGDTLAALTSGIQTAGPSSKGGADIQPLQVDESVSFDDIGGLSEYID 389
VA GH G LAAL S + A + + D+ L+ DE++ + + L+ +D
Sbjct: 399 VANETHGHVGADLAALCS--EAALQAIRKKMDLIDLE-DETIDAEVMNSLAVTMD 450
>UNIPROTKB|P23787 [details] [associations]
symbol:vcp "Transitional endoplasmic reticulum ATPase"
species:8355 "Xenopus laevis" [GO:0000785 "chromatin" evidence=IDA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0006200 "ATP catabolic process" evidence=IDA]
[GO:0006302 "double-strand break repair" evidence=ISS] [GO:0006974
"response to DNA damage stimulus" evidence=ISS] [GO:0016567
"protein ubiquitination" evidence=ISS] [GO:0016887 "ATPase
activity" evidence=IDA] [GO:0018279 "protein N-linked glycosylation
via asparagine" evidence=ISS] [GO:0019985 "translesion synthesis"
evidence=ISS] [GO:0030433 "ER-associated protein catabolic process"
evidence=ISS] [GO:0032403 "protein complex binding" evidence=IPI]
[GO:0034214 "protein hexamerization" evidence=IDA] [GO:0035861
"site of double-strand break" evidence=ISS] [GO:0035101 "FACT
complex" evidence=IPI] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 InterPro:IPR003338 Pfam:PF02359 GO:GO:0005829
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0006810
GO:GO:0000785 GO:GO:0016887 GO:GO:0016567 GO:GO:0008289
GO:GO:0030433 GO:GO:0006302 GO:GO:0018279 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 InterPro:IPR015415 Pfam:PF09336
KO:K13525 InterPro:IPR004201 PANTHER:PTHR23077:SF18 Pfam:PF02933
SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243 GO:GO:0034214
GO:GO:0035861 GO:GO:0019985 HOVERGEN:HBG001226 CTD:7415 EMBL:X54240
EMBL:BC046949 PIR:S19738 RefSeq:NP_001095217.1 UniGene:Xl.8775
ProteinModelPortal:P23787 SMR:P23787 PRIDE:P23787 GeneID:380491
KEGG:xla:380491 Xenbase:XB-GENE-969578 Uniprot:P23787
Length = 805
Score = 572 (206.4 bits), Expect = 2.0e-53, P = 2.0e-53
Identities = 151/404 (37%), Positives = 221/404 (54%)
Query: 376 VSFDDIGGLSEYIDALKEMVFFPLLYPDFFASYHITPPRGVLLCGPPGTGKTLIARALAC 435
V +DDIGG + + +KEMV PL +P F + + PPRG+LL GPPGTGKTLIARA+A
Sbjct: 201 VGYDDIGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILLYGPPGTGKTLIARAVA- 259
Query: 436 AASKAGQKVSFYMRKGADVLSKWVGEAERQLKLLFEEAQRNQPSIIFFDEIDGLAPVRSS 495
++ G F++ G +++SK GE+E L+ FEEA++N P+IIF DE+D +AP R
Sbjct: 260 --NETG--AFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPAIIFIDELDAIAPKREK 315
Query: 496 KQEQIHNSIVSTLLALMDGLDSRGQVVLIGATNRVDAIDGALRRPGRFDREFNFPLPGCE 555
++ IVS LL LMDGL R V+++ ATNR ++ID ALRR GRFDRE + +P
Sbjct: 316 THGEVERRIVSQLLTLMDGLKQRAHVIVMAATNRPNSIDPALRRFGRFDREVDIGIPDST 375
Query: 556 ARAEILDIHTRKWKQPPSRELKSELAASCVGYCGADLKALCTEAAIRAFREKYPQVYTSD 615
R EIL IHT+ K +L+ ++A G+ GADL ALC+EAA++A R+K + D
Sbjct: 376 GRLEILQIHTKNMKLSDDVDLE-QVANETHGHVGADLAALCSEAALQAIRKKMDLIDLED 434
Query: 616 DKFLIDV-DSVTVEKYHFIEAMSTITPAAHRGATVHSRPLSLVVAPCLQ---RHLQKAMN 671
+ +V +S+ V F A+S P+A R V ++ L+ R LQ+ +
Sbjct: 435 ETIDAEVMNSLAVTMDDFRWALSQSNPSALRETVVEVPQVTWEDIGGLEDVKRELQELVQ 494
Query: 672 YISDIFPPLGMSSELTKLCML-SHGSAIPLVYRPRLLLCGSEGTGVDHLGPAILHELEKF 730
Y P+ + K M S G +L G G G L AI +E +
Sbjct: 495 Y------PVEHPDKFLKFGMTPSKG----------VLFYGPPGCGKTLLAKAIANECQAN 538
Query: 731 PVHSLGLPALLSDPSAKTPEEALVHIFGEARRTTPSILYIPQFN 774
+ G P LL+ ++ E + IF +AR+ P +L+ + +
Sbjct: 539 FISIKG-PELLTMWFGES-EANVREIFDKARQAAPCVLFFDELD 580
Score = 403 (146.9 bits), Expect = 1.1e-33, Sum P(2) = 1.1e-33
Identities = 87/235 (37%), Positives = 139/235 (59%)
Query: 376 VSFDDIGGLSEYIDALKEMVFFPLLYPDFFASYHITPPRGVLLCGPPGTGKTLIARALAC 435
V+++DIGGL + L+E+V +P+ +PD F + +TP +GVL GPPG GKTL+A+A+A
Sbjct: 474 VTWEDIGGLEDVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIAN 533
Query: 436 AASKAGQKVSFYMRKGADVLSKWVGEAERQLKLLFEEAQRNQPSIIFFDEIDGLAPVRSS 495
+ +F KG ++L+ W GE+E ++ +F++A++ P ++FFDE+D +A R
Sbjct: 534 EC-----QANFISIKGPELLTMWFGESEANVREIFDKARQAAPCVLFFDELDSIAKARGG 588
Query: 496 KQEQ---IHNSIVSTLLALMDGLDSRGQVVLIGATNRVDAIDGALRRPGRFDREFNFPLP 552
+ +++ +L MDG+ + V +IGATNR D ID A+ RPGR D+ PLP
Sbjct: 589 NIGDGGGAADRVINQILTEMDGMSIKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPLP 648
Query: 553 GCEARAEILDIHTRKWKQPPSRELKSELAASCV-GYCGADLKALCTEAAIRAFRE 606
++R IL + RK P ++++ + A G+ GADL +C A A RE
Sbjct: 649 DEKSRMAILKANLRK--SPVAKDVDVDFLAKMTNGFSGADLTEICQRACKLAIRE 701
Score = 44 (20.5 bits), Expect = 1.1e-33, Sum P(2) = 1.1e-33
Identities = 17/55 (30%), Positives = 28/55 (50%)
Query: 335 VAASGWGHQGDTLAALTSGIQTAGPSSKGGADIQPLQVDESVSFDDIGGLSEYID 389
VA GH G LAAL S + A + + D+ L+ DE++ + + L+ +D
Sbjct: 399 VANETHGHVGADLAALCS--EAALQAIRKKMDLIDLE-DETIDAEVMNSLAVTMD 450
>UNIPROTKB|E2RLQ9 [details] [associations]
symbol:VCP "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0070842 "aggresome assembly" evidence=IEA]
[GO:0045732 "positive regulation of protein catabolic process"
evidence=IEA] [GO:0035861 "site of double-strand break"
evidence=IEA] [GO:0031593 "polyubiquitin binding" evidence=IEA]
[GO:0031334 "positive regulation of protein complex assembly"
evidence=IEA] [GO:0030970 "retrograde protein transport, ER to
cytosol" evidence=IEA] [GO:0019904 "protein domain specific
binding" evidence=IEA] [GO:0019903 "protein phosphatase binding"
evidence=IEA] [GO:0018279 "protein N-linked glycosylation via
asparagine" evidence=IEA] [GO:0006919 "activation of cysteine-type
endopeptidase activity involved in apoptotic process" evidence=IEA]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0006302 "double-strand break repair"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0000502 "proteasome complex"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 Pfam:PF02359 GO:GO:0005524 GO:GO:0005634
GO:GO:0005737 GO:GO:0031334 GO:GO:0006919 GO:GO:0006302
GO:GO:0000502 GO:GO:0006511 GO:GO:0017111 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 InterPro:IPR015415 Pfam:PF09336
GO:GO:0045732 InterPro:IPR004201 PANTHER:PTHR23077:SF18
Pfam:PF02933 SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243
OMA:AYRPIHK GO:GO:0030970 GeneTree:ENSGT00700000104534
GO:GO:0070842 EMBL:AAEX03007949 Ensembl:ENSCAFT00000003151
NextBio:20856352 Uniprot:E2RLQ9
Length = 822
Score = 573 (206.8 bits), Expect = 2.4e-53, P = 2.4e-53
Identities = 151/404 (37%), Positives = 221/404 (54%)
Query: 376 VSFDDIGGLSEYIDALKEMVFFPLLYPDFFASYHITPPRGVLLCGPPGTGKTLIARALAC 435
V +DDIGG + + +KEMV PL +P F + + PPRG+LL GPPGTGKTLIARA+A
Sbjct: 217 VGYDDIGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILLYGPPGTGKTLIARAVA- 275
Query: 436 AASKAGQKVSFYMRKGADVLSKWVGEAERQLKLLFEEAQRNQPSIIFFDEIDGLAPVRSS 495
++ G F++ G +++SK GE+E L+ FEEA++N P+IIF DE+D +AP R
Sbjct: 276 --NETG--AFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPAIIFIDELDAIAPKREK 331
Query: 496 KQEQIHNSIVSTLLALMDGLDSRGQVVLIGATNRVDAIDGALRRPGRFDREFNFPLPGCE 555
++ IVS LL LMDGL R V+++ ATNR ++ID ALRR GRFDRE + +P
Sbjct: 332 THGEVERRIVSQLLTLMDGLKQRAHVIVMAATNRPNSIDPALRRFGRFDREVDIGIPDAT 391
Query: 556 ARAEILDIHTRKWKQPPSRELKSELAASCVGYCGADLKALCTEAAIRAFREKYPQVYTSD 615
R EIL IHT+ K +L+ ++A G+ GADL ALC+EAA++A R+K + D
Sbjct: 392 GRLEILQIHTKNMKLADDVDLE-QVANETHGHVGADLAALCSEAALQAIRKKMDLIDLED 450
Query: 616 DKFLIDV-DSVTVEKYHFIEAMSTITPAAHRGATVHSRPLSLVVAPCLQ---RHLQKAMN 671
+ +V +S+ V F A+S P+A R V ++ L+ R LQ+ +
Sbjct: 451 ETIDAEVMNSLAVTMDDFRWALSQSNPSALRETVVEVPQVTWEDIGGLEDVKRELQELVQ 510
Query: 672 YISDIFPPLGMSSELTKLCML-SHGSAIPLVYRPRLLLCGSEGTGVDHLGPAILHELEKF 730
Y P+ + K M S G +L G G G L AI +E +
Sbjct: 511 Y------PVEHPDKFLKFGMTPSKG----------VLFYGPPGCGKTLLAKAIANECQAN 554
Query: 731 PVHSLGLPALLSDPSAKTPEEALVHIFGEARRTTPSILYIPQFN 774
+ G P LL+ ++ E + IF +AR+ P +L+ + +
Sbjct: 555 FISIKG-PELLTMWFGES-EANVREIFDKARQAAPCVLFFDELD 596
Score = 410 (149.4 bits), Expect = 2.1e-34, Sum P(2) = 2.1e-34
Identities = 88/235 (37%), Positives = 140/235 (59%)
Query: 376 VSFDDIGGLSEYIDALKEMVFFPLLYPDFFASYHITPPRGVLLCGPPGTGKTLIARALAC 435
V+++DIGGL + L+E+V +P+ +PD F + +TP +GVL GPPG GKTL+A+A+A
Sbjct: 490 VTWEDIGGLEDVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIAN 549
Query: 436 AASKAGQKVSFYMRKGADVLSKWVGEAERQLKLLFEEAQRNQPSIIFFDEIDGLAPVRSS 495
+ +F KG ++L+ W GE+E ++ +F++A++ P ++FFDE+D +A R
Sbjct: 550 EC-----QANFISIKGPELLTMWFGESEANVREIFDKARQAAPCVLFFDELDSIAKARGG 604
Query: 496 KQEQ---IHNSIVSTLLALMDGLDSRGQVVLIGATNRVDAIDGALRRPGRFDREFNFPLP 552
+ +++ +L MDG+ ++ V +IGATNR D ID A+ RPGR D+ PLP
Sbjct: 605 NIGDGGGAADRVINQILTEMDGMSTKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPLP 664
Query: 553 GCEARAEILDIHTRKWKQPPSRELKSELAASCV-GYCGADLKALCTEAAIRAFRE 606
++R IL + RK P ++++ E A G+ GADL +C A A RE
Sbjct: 665 DEKSRVAILKANLRK--SPVAKDVDLEFLAKMTNGFSGADLTEICQRACKLAIRE 717
Score = 44 (20.5 bits), Expect = 2.1e-34, Sum P(2) = 2.1e-34
Identities = 17/55 (30%), Positives = 28/55 (50%)
Query: 335 VAASGWGHQGDTLAALTSGIQTAGPSSKGGADIQPLQVDESVSFDDIGGLSEYID 389
VA GH G LAAL S + A + + D+ L+ DE++ + + L+ +D
Sbjct: 415 VANETHGHVGADLAALCS--EAALQAIRKKMDLIDLE-DETIDAEVMNSLAVTMD 466
>UNIPROTKB|P03974 [details] [associations]
symbol:VCP "Transitional endoplasmic reticulum ATPase"
species:9823 "Sus scrofa" [GO:0019985 "translesion synthesis"
evidence=ISS] [GO:0016567 "protein ubiquitination" evidence=ISS]
[GO:0006974 "response to DNA damage stimulus" evidence=ISS]
[GO:0035861 "site of double-strand break" evidence=ISS] [GO:0006302
"double-strand break repair" evidence=ISS] [GO:0018279 "protein
N-linked glycosylation via asparagine" evidence=ISS] [GO:0030433
"ER-associated protein catabolic process" evidence=ISS] [GO:0005829
"cytosol" evidence=IEA] [GO:0005783 "endoplasmic reticulum"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0008289
"lipid binding" evidence=IEA] [GO:0006810 "transport" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 Pfam:PF02359 GO:GO:0005783 GO:GO:0005829
GO:GO:0005524 GO:GO:0005634 GO:GO:0006810 GO:GO:0016567
GO:GO:0008289 GO:GO:0030433 GO:GO:0006302 eggNOG:COG0464
GO:GO:0017111 GO:GO:0018279 Gene3D:2.40.40.20 InterPro:IPR009010
SUPFAM:SSF50692 InterPro:IPR015415 Pfam:PF09336
HOGENOM:HOG000223224 KO:K13525 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 GO:GO:0035861 GO:GO:0019985 HOVERGEN:HBG001226
CTD:7415 OrthoDB:EOG45TCMK EMBL:M30143 PIR:A26360
RefSeq:NP_999445.1 UniGene:Ssc.856 ProteinModelPortal:P03974
SMR:P03974 STRING:P03974 GeneID:397524 KEGG:ssc:397524
Uniprot:P03974
Length = 806
Score = 571 (206.1 bits), Expect = 2.7e-53, P = 2.7e-53
Identities = 151/404 (37%), Positives = 220/404 (54%)
Query: 376 VSFDDIGGLSEYIDALKEMVFFPLLYPDFFASYHITPPRGVLLCGPPGTGKTLIARALAC 435
V +DDIGG + + +KEMV PL +P F + + PPRG+LL GPPGTGKTLIARA+A
Sbjct: 201 VGYDDIGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILLYGPPGTGKTLIARAVA- 259
Query: 436 AASKAGQKVSFYMRKGADVLSKWVGEAERQLKLLFEEAQRNQPSIIFFDEIDGLAPVRSS 495
++ G F++ G +++SK GE+E L+ FEEA++N P+IIF DE+D +AP R
Sbjct: 260 --NETG--AFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPAIIFIDELDAIAPKREK 315
Query: 496 KQEQIHNSIVSTLLALMDGLDSRGQVVLIGATNRVDAIDGALRRPGRFDREFNFPLPGCE 555
++ IVS LL LMDGL R V+++ ATNR ++ID ALRR GRFDRE + +P
Sbjct: 316 THGEVERRIVSQLLTLMDGLKQRAHVIVMAATNRPNSIDPALRRFGRFDREVDIGIPDAT 375
Query: 556 ARAEILDIHTRKWKQPPSRELKSELAASCVGYCGADLKALCTEAAIRAFREKYPQVYTSD 615
R EIL IHT+ K +L+ ++A G+ GADL ALC+EAA++A R+K + D
Sbjct: 376 GRLEILQIHTKNMKLADDVDLE-QVANETHGHVGADLAALCSEAALQAIRKKMDLIDLED 434
Query: 616 DKFLIDV-DSVTVEKYHFIEAMSTITPAAHRGATVHSRPLSLVVAPCLQ---RHLQKAMN 671
+ +V +S+ V F A+S P+A R V ++ L+ R LQ +
Sbjct: 435 ETIDAEVMNSLAVTMDDFRWALSQSNPSALRETVVEVPQVTWEDIGGLEDVKRELQDLVQ 494
Query: 672 YISDIFPPLGMSSELTKLCML-SHGSAIPLVYRPRLLLCGSEGTGVDHLGPAILHELEKF 730
Y P+ + K M S G +L G G G L AI +E +
Sbjct: 495 Y------PVEHPDKFLKFGMTPSKG----------VLFYGPPGCGKTLLAKAIANECQAN 538
Query: 731 PVHSLGLPALLSDPSAKTPEEALVHIFGEARRTTPSILYIPQFN 774
+ G P LL+ ++ E + IF +AR+ P +L+ + +
Sbjct: 539 FISIKG-PELLTMWFGES-EANVREIFDKARQAAPCVLFFDELD 580
Score = 407 (148.3 bits), Expect = 4.1e-34, Sum P(2) = 4.1e-34
Identities = 87/235 (37%), Positives = 140/235 (59%)
Query: 376 VSFDDIGGLSEYIDALKEMVFFPLLYPDFFASYHITPPRGVLLCGPPGTGKTLIARALAC 435
V+++DIGGL + L+++V +P+ +PD F + +TP +GVL GPPG GKTL+A+A+A
Sbjct: 474 VTWEDIGGLEDVKRELQDLVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIAN 533
Query: 436 AASKAGQKVSFYMRKGADVLSKWVGEAERQLKLLFEEAQRNQPSIIFFDEIDGLAPVRSS 495
+ +F KG ++L+ W GE+E ++ +F++A++ P ++FFDE+D +A R
Sbjct: 534 EC-----QANFISIKGPELLTMWFGESEANVREIFDKARQAAPCVLFFDELDSIAKARGG 588
Query: 496 KQEQ---IHNSIVSTLLALMDGLDSRGQVVLIGATNRVDAIDGALRRPGRFDREFNFPLP 552
+ +++ +L MDG+ ++ V +IGATNR D ID A+ RPGR D+ PLP
Sbjct: 589 NIGDGGGAADRVINQILTEMDGMSTKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPLP 648
Query: 553 GCEARAEILDIHTRKWKQPPSRELKSELAASCV-GYCGADLKALCTEAAIRAFRE 606
++R IL + RK P ++++ E A G+ GADL +C A A RE
Sbjct: 649 DEKSRVAILKANLRK--SPVAKDVDLEFLAKMTNGFSGADLTEICQRACKLAIRE 701
Score = 44 (20.5 bits), Expect = 4.1e-34, Sum P(2) = 4.1e-34
Identities = 17/55 (30%), Positives = 28/55 (50%)
Query: 335 VAASGWGHQGDTLAALTSGIQTAGPSSKGGADIQPLQVDESVSFDDIGGLSEYID 389
VA GH G LAAL S + A + + D+ L+ DE++ + + L+ +D
Sbjct: 399 VANETHGHVGADLAALCS--EAALQAIRKKMDLIDLE-DETIDAEVMNSLAVTMD 450
>ASPGD|ASPL0000069340 [details] [associations]
symbol:AN7254 species:162425 "Emericella nidulans"
[GO:0071470 "cellular response to osmotic stress" evidence=IEP]
[GO:0097308 "cellular response to farnesol" evidence=IEP]
[GO:0030970 "retrograde protein transport, ER to cytosol"
evidence=IEA] [GO:0031134 "sister chromatid biorientation"
evidence=IEA] [GO:0033047 "regulation of mitotic sister chromatid
segregation" evidence=IEA] [GO:0071629 "cytoplasm-associated
proteasomal ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:1900182 "positive regulation of protein
localization to nucleus" evidence=IEA] [GO:0071630
"nucleus-associated proteasomal ubiquitin-dependent protein
catabolic process" evidence=IEA] [GO:0071712 "ER-associated
misfolded protein catabolic process" evidence=IEA] [GO:0051228
"mitotic spindle disassembly" evidence=IEA] [GO:0016320
"endoplasmic reticulum membrane fusion" evidence=IEA] [GO:0034727
"piecemeal microautophagy of nucleus" evidence=IEA] [GO:0072671
"mitochondria-associated protein catabolic process" evidence=IEA]
[GO:0034517 "ribophagy" evidence=IEA] [GO:0061166 "establishment of
endoplasmic reticulum localization involved in endoplasmic
reticulum polarization at cell division site" evidence=IEA]
[GO:0016236 "macroautophagy" evidence=IEA] [GO:0043130 "ubiquitin
binding" evidence=IEA] [GO:0016887 "ATPase activity" evidence=IEA]
[GO:0043332 "mating projection tip" evidence=IEA] [GO:0000790
"nuclear chromatin" evidence=IEA] [GO:0034098 "Cdc48p-Npl4p-Ufd1p
AAA ATPase complex" evidence=IEA] [GO:0036266 "Cdc48p-Npl4p-Vms1p
AAA ATPase complex" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] [GO:0000837 "Doa10p ubiquitin ligase complex"
evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 InterPro:IPR003338 Pfam:PF02359 GO:GO:0005524
GO:GO:0006950 GO:GO:0015031 GO:GO:0007049 EMBL:BN001304 HSSP:Q01853
eggNOG:COG0464 GO:GO:0017111 Gene3D:2.40.40.20 InterPro:IPR009010
SUPFAM:SSF50692 InterPro:IPR015415 Pfam:PF09336
HOGENOM:HOG000223224 KO:K13525 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 EMBL:AACD01000124 RefSeq:XP_680523.1
STRING:Q5AWS6 PRIDE:Q5AWS6 GeneID:2869922 KEGG:ani:AN7254.2
OrthoDB:EOG47H8Z3 Uniprot:Q5AWS6
Length = 823
Score = 569 (205.4 bits), Expect = 9.9e-53, Sum P(2) = 9.9e-53
Identities = 148/404 (36%), Positives = 222/404 (54%)
Query: 376 VSFDDIGGLSEYIDALKEMVFFPLLYPDFFASYHITPPRGVLLCGPPGTGKTLIARALAC 435
V +DDIGG + + ++E+V PL +P F S I PPRG+L+ GPPGTGKTL+ARA+A
Sbjct: 222 VGYDDIGGCRKQMAQIRELVELPLRHPQLFKSIGIKPPRGILMYGPPGTGKTLMARAVA- 280
Query: 436 AASKAGQKVSFYMRKGADVLSKWVGEAERQLKLLFEEAQRNQPSIIFFDEIDGLAPVRSS 495
++ G F++ G +++SK GE+E L+ FEEA++N P+IIF DEID +AP R
Sbjct: 281 --NETG--AFFFLINGPEIMSKMAGESESNLRKAFEEAEKNSPAIIFIDEIDSIAPKREK 336
Query: 496 KQEQIHNSIVSTLLALMDGLDSRGQVVLIGATNRVDAIDGALRRPGRFDREFNFPLPGCE 555
++ +VS LL LMDG+ +R VV++ ATNR ++ID ALRR GRFDRE + +P
Sbjct: 337 TNGEVERRVVSQLLTLMDGMKARSNVVVMAATNRPNSIDPALRRFGRFDREVDIGIPDPT 396
Query: 556 ARAEILDIHTRKWKQPPSRELKSELAASCVGYCGADLKALCTEAAIRAFREKYPQVYTSD 615
R EIL IHT+ K +L++ +AA GY G+DL +LC+EAA++ REK + +
Sbjct: 397 GRLEILSIHTKNMKLGEDVDLET-IAAETHGYVGSDLASLCSEAAMQQIREKMDLIDLDE 455
Query: 616 DKFLIDV-DSVTVEKYHFIEAMSTITPAAHRGATVHSRPL----SLVVAPCLQRHLQKAM 670
D +V DS+ V +F A+ P+A R V P + ++R L +++
Sbjct: 456 DTIDAEVLDSLGVTMENFRYALGVSNPSALREVAVVEVPNVRWEDIGGLEEVKRELIESV 515
Query: 671 NYISDIFPPLGMSSELTKLCMLSHGSAIPLVYRPRLLLCGSEGTGVDHLGPAILHELEKF 730
Y P+ + K LS + L Y P GTG L A+ +E
Sbjct: 516 QY------PVDHPEKFQKFG-LSPSRGV-LFYGP-------PGTGKTMLAKAVANECAAN 560
Query: 731 PVHSLGLPALLSDPSAKTPEEALVHIFGEARRTTPSILYIPQFN 774
+ G P LLS ++ E + IF +AR P ++++ + +
Sbjct: 561 FISVKG-PELLSMWFGES-ESNIRDIFDKARAAAPCVVFLDELD 602
Score = 383 (139.9 bits), Expect = 9.6e-31, Sum P(2) = 9.6e-31
Identities = 98/270 (36%), Positives = 151/270 (55%)
Query: 344 GDTLAALTSGIQTAGPSSKGGADIQPLQVDESVSFDDIGGLSEYIDALKEMVFFPLLYPD 403
G T+ + + PS+ ++ ++V +V ++DIGGL E L E V +P+ +P+
Sbjct: 467 GVTMENFRYALGVSNPSAL--REVAVVEVP-NVRWEDIGGLEEVKRELIESVQYPVDHPE 523
Query: 404 FFASYHITPPRGVLLCGPPGTGKTLIARALA--CAASKAGQKVSFYMRKGADVLSKWVGE 461
F + ++P RGVL GPPGTGKT++A+A+A CAA+ F KG ++LS W GE
Sbjct: 524 KFQKFGLSPSRGVLFYGPPGTGKTMLAKAVANECAAN-------FISVKGPELLSMWFGE 576
Query: 462 AERQLKLLFEEAQRNQPSIIFFDEIDGLAPVRSSKQEQIHNS---IVSTLLALMDGLDSR 518
+E ++ +F++A+ P ++F DE+D +A R + +V+ LL MDG+ S+
Sbjct: 577 SESNIRDIFDKARAAAPCVVFLDELDSIAKSRGGSVGDAGGASDRVVNQLLTEMDGMTSK 636
Query: 519 GQVVLIGATNRVDAIDGALRRPGRFDREFNFPLPGCEARAEILDIHTRKWKQPPSRELKS 578
V +IGATNR + +D AL RPGR D PLP +R IL RK P + ++
Sbjct: 637 KNVFVIGATNRPEQLDAALVRPGRLDTLVYVPLPDQASREGILKAQLRK--TPVASDVDI 694
Query: 579 ELAASCV-GYCGADLKALCTEAAIR-AFRE 606
E AS G+ GADL T+ A++ A +E
Sbjct: 695 EFIASKTHGFSGADL-GFVTQRAVKLAIKE 723
Score = 38 (18.4 bits), Expect = 9.9e-53, Sum P(2) = 9.9e-53
Identities = 9/38 (23%), Positives = 20/38 (52%)
Query: 84 RKRRISVNLEDYTDSSGSEDEDLMRPSYRPLRNRMRNN 121
+K V+ + D+SG+E ++ + S L+ + + N
Sbjct: 8 KKLLYGVHFLQFLDASGAEKKEELDTSTAILKKKKKPN 45
>POMBASE|SPAC1565.08 [details] [associations]
symbol:cdc48 "AAA family ATPase Cdc48" species:4896
"Schizosaccharomyces pombe" [GO:0000790 "nuclear chromatin"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0005789
"endoplasmic reticulum membrane" evidence=ISO] [GO:0005829
"cytosol" evidence=IDA] [GO:0006511 "ubiquitin-dependent protein
catabolic process" evidence=IGI] [GO:0006906 "vesicle fusion"
evidence=ISO] [GO:0016887 "ATPase activity" evidence=ISM]
[GO:0030433 "ER-associated protein catabolic process" evidence=ISO]
[GO:0030970 "retrograde protein transport, ER to cytosol"
evidence=ISS] [GO:0033047 "regulation of mitotic sister chromatid
segregation" evidence=IGI] [GO:0033554 "cellular response to
stress" evidence=IGI] [GO:0034098 "Cdc48p-Npl4p-Ufd1p AAA ATPase
complex" evidence=ISO] [GO:0051230 "spindle disassembly"
evidence=TAS] [GO:0061166 "establishment of endoplasmic reticulum
localization involved in endoplasmic reticulum polarization at cell
division site" evidence=IMP] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 InterPro:IPR003338 PomBase:SPAC1565.08 Pfam:PF02359
GO:GO:0005829 GO:GO:0005524 EMBL:CU329670 GenomeReviews:CU329670_GR
GO:GO:0033554 GO:GO:0016887 GO:GO:0000790 GO:GO:0030433
eggNOG:COG0464 Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
GO:GO:0006906 GO:GO:0033047 HOGENOM:HOG000223224 KO:K13525
InterPro:IPR004201 PANTHER:PTHR23077:SF18 Pfam:PF02933
SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243 GO:GO:0061166
OrthoDB:EOG47H8Z3 RefSeq:NP_593287.2 ProteinModelPortal:Q9P3A7
SMR:Q9P3A7 IntAct:Q9P3A7 STRING:Q9P3A7 PRIDE:Q9P3A7
EnsemblFungi:SPAC1565.08.1 GeneID:2542744 KEGG:spo:SPAC1565.08
OMA:IVTIHPC NextBio:20803789 GO:GO:0034098 GO:GO:0030970
GO:GO:0051230 Uniprot:Q9P3A7
Length = 815
Score = 564 (203.6 bits), Expect = 2.6e-52, P = 2.6e-52
Identities = 147/400 (36%), Positives = 222/400 (55%)
Query: 376 VSFDDIGGLSEYIDALKEMVFFPLLYPDFFASYHITPPRGVLLCGPPGTGKTLIARALAC 435
V +DDIGG + ++E+V PL +P F S I PPRG+L+ GPPGTGKTL+ARA+A
Sbjct: 221 VGYDDIGGCRRQMAQIRELVELPLRHPQLFKSIGIKPPRGILMYGPPGTGKTLMARAVA- 279
Query: 436 AASKAGQKVSFYMRKGADVLSKWVGEAERQLKLLFEEAQRNQPSIIFFDEIDGLAPVRSS 495
++ G F++ G +++SK GE+E L+ FEEA++N P+IIF DEID +AP R
Sbjct: 280 --NETG--AFFFLINGPEIMSKMAGESESNLRKAFEEAEKNSPAIIFIDEIDSIAPKREK 335
Query: 496 KQEQIHNSIVSTLLALMDGLDSRGQVVLIGATNRVDAIDGALRRPGRFDREFNFPLPGCE 555
++ +VS LL LMDG+ +R VV++ ATNR ++ID ALRR GRFDRE + +P
Sbjct: 336 TNGEVERRVVSQLLTLMDGMKARSNVVVMAATNRPNSIDPALRRFGRFDREVDVGIPDPT 395
Query: 556 ARAEILDIHTRKWKQPPSRELKSELAASCVGYCGADLKALCTEAAIRAFREKYPQVYTSD 615
R EIL IHT+ K +L+ ++AA GY G+DL +LC+EAA++ REK + +
Sbjct: 396 GRLEILRIHTKNMKLADDVDLE-QIAAETHGYVGSDLASLCSEAAMQQIREKMDMIDLDE 454
Query: 616 DKFLIDV-DSVTVEKYHFIEAMSTITPAAHRGATVHSRPLSLVVAPCLQRHLQKAMNYIS 674
D+ +V DS+ V +F A+ + P+A R V + L+ +++ +
Sbjct: 455 DEIDAEVLDSLGVTMDNFRFALGSSNPSALRETVVEVPNVRWEDIGGLEE-VKRELR--E 511
Query: 675 DIFPPLGMSSELTKLCMLSHGSAIPLVYRPRLLLCGSEGTGVDHLGPAILHELEKFPVHS 734
+ P+ M +E L G P +L G GTG L AI +E +
Sbjct: 512 TVQMPV-MYAEK----FLRFG-VTP---SKGVLFFGPPGTGKTLLAKAIANECSANFISV 562
Query: 735 LGLPALLSDPSAKTPEEALVHIFGEARRTTPSILYIPQFN 774
G P LLS ++ E + IF +AR P ++++ + +
Sbjct: 563 KG-PELLSMWFGES-ESNVRDIFDKARAAAPCVVFLDELD 600
Score = 413 (150.4 bits), Expect = 3.3e-35, P = 3.3e-35
Identities = 108/304 (35%), Positives = 166/304 (54%)
Query: 345 DTLAALTSGIQTAGPSSKGGADIQPLQVDESVSFDDIGGLSEYIDALKEMVFFPLLYPDF 404
D+L + A SS A + + +V ++DIGGL E L+E V P++Y +
Sbjct: 463 DSLGVTMDNFRFALGSSNPSALRETVVEVPNVRWEDIGGLEEVKRELRETVQMPVMYAEK 522
Query: 405 FASYHITPPRGVLLCGPPGTGKTLIARALACAASKAGQKVSFYMRKGADVLSKWVGEAER 464
F + +TP +GVL GPPGTGKTL+A+A+A S +F KG ++LS W GE+E
Sbjct: 523 FLRFGVTPSKGVLFFGPPGTGKTLLAKAIANECS-----ANFISVKGPELLSMWFGESES 577
Query: 465 QLKLLFEEAQRNQPSIIFFDEIDGLAPVR--SSKQEQIHNSIVSTLLALMDGLDSRGQVV 522
++ +F++A+ P ++F DE+D +A R S+ + +V+ LL MDG++S+ V
Sbjct: 578 NVRDIFDKARAAAPCVVFLDELDSIAKARGASAGDSGGGDRVVNQLLTEMDGVNSKKNVF 637
Query: 523 LIGATNRVDAIDGALRRPGRFDREFNFPLPGCEARAEILDIHTRKWKQPPSRELKSELAA 582
+IGATNR D ID AL RPGR D+ PLP EAR IL R +L++ +A
Sbjct: 638 VIGATNRPDQIDPALMRPGRLDQLIYVPLPDEEARFSILQTQLRHTPVAEDVDLRA-VAK 696
Query: 583 SCVGYCGADLKALCTEAAIRAFREKYPQVYTSD--------DKFLIDVD-SVT-VEKYHF 632
+ G+ GADL+ + A A ++ + + D ++D D SV+ V+++H
Sbjct: 697 ATHGFSGADLEFVVQRAVKLAIKDSIEEDIKRENETGEAPADDVVMDEDASVSQVQRHHV 756
Query: 633 IEAM 636
EAM
Sbjct: 757 EEAM 760
>CGD|CAL0000732 [details] [associations]
symbol:CDC48 species:5476 "Candida albicans" [GO:0005886
"plasma membrane" evidence=IDA] [GO:0043332 "mating projection tip"
evidence=IEA] [GO:0000790 "nuclear chromatin" evidence=IEA]
[GO:0034098 "Cdc48p-Npl4p-Ufd1p AAA ATPase complex" evidence=IEA]
[GO:0005829 "cytosol" evidence=IEA] [GO:0036266 "Cdc48p-Npl4p-Vms1p
AAA ATPase complex" evidence=IEA] [GO:0000837 "Doa10p ubiquitin
ligase complex" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IEA] [GO:0030970 "retrograde protein transport, ER to
cytosol" evidence=IEA] [GO:0031134 "sister chromatid biorientation"
evidence=IEA] [GO:0033047 "regulation of mitotic sister chromatid
segregation" evidence=IEA] [GO:0071629 "cytoplasm-associated
proteasomal ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:1900182 "positive regulation of protein
localization to nucleus" evidence=IEA] [GO:0071712 "ER-associated
misfolded protein catabolic process" evidence=IEA] [GO:0071630
"nucleus-associated proteasomal ubiquitin-dependent protein
catabolic process" evidence=IEA] [GO:0051228 "mitotic spindle
disassembly" evidence=IEA] [GO:0016320 "endoplasmic reticulum
membrane fusion" evidence=IEA] [GO:0034727 "piecemeal
microautophagy of nucleus" evidence=IEA] [GO:0072671
"mitochondria-associated protein catabolic process" evidence=IEA]
[GO:0034517 "ribophagy" evidence=IEA] [GO:0061166 "establishment of
endoplasmic reticulum localization involved in endoplasmic
reticulum polarization at cell division site" evidence=IEA]
[GO:0016236 "macroautophagy" evidence=IEA] [GO:0009986 "cell
surface" evidence=IDA] [GO:0043130 "ubiquitin binding"
evidence=IEA] [GO:0016887 "ATPase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 CGD:CAL0000732 Pfam:PF02359 GO:GO:0005886
GO:GO:0005524 GO:GO:0009986 eggNOG:COG0464 GO:GO:0017111
Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
InterPro:IPR015415 Pfam:PF09336 EMBL:AACQ01000114 EMBL:AACQ01000113
HOGENOM:HOG000223224 KO:K13525 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 RefSeq:XP_713945.1 RefSeq:XP_714003.1
ProteinModelPortal:Q59WG3 SMR:Q59WG3 STRING:Q59WG3 GeneID:3644394
GeneID:3644440 KEGG:cal:CaO19.2340 KEGG:cal:CaO19.9876
Uniprot:Q59WG3
Length = 826
Score = 562 (202.9 bits), Expect = 5.6e-52, P = 5.6e-52
Identities = 143/403 (35%), Positives = 226/403 (56%)
Query: 376 VSFDDIGGLSEYIDALKEMVFFPLLYPDFFASYHITPPRGVLLCGPPGTGKTLIARALAC 435
V +DDIGG + + ++E+V PL +P F S I PP+G+L+ GPPGTGKT++ARA+A
Sbjct: 212 VGYDDIGGCKKQMAQIRELVELPLRHPQLFKSIGIKPPKGILMYGPPGTGKTIMARAVA- 270
Query: 436 AASKAGQKVSFYMRKGADVLSKWVGEAERQLKLLFEEAQRNQPSIIFFDEIDGLAPVRSS 495
++ G F++ G +++SK GE+E L+ FEEA++N PSIIF DEID +AP R
Sbjct: 271 --NETG--AFFFLINGPEIMSKMAGESESNLRKAFEEAEKNSPSIIFIDEIDSIAPKRDK 326
Query: 496 KQEQIHNSIVSTLLALMDGLDSRGQVVLIGATNRVDAIDGALRRPGRFDREFNFPLPGCE 555
++ +VS LL LMDG+ +R VV+I ATNR ++ID ALRR GRFDRE + +P E
Sbjct: 327 TNGEVERRVVSQLLTLMDGMKARSNVVVIAATNRPNSIDPALRRFGRFDREVDIGVPDAE 386
Query: 556 ARAEILDIHTRKWKQPPSRELKSELAASCVGYCGADLKALCTEAAIRAFREKYPQVYTSD 615
R EIL IHT+ K +L++ +A+ G+ GAD+ +LC+EAA++ REK + +
Sbjct: 387 GRLEILRIHTKNMKLADDVDLEA-IASETHGFVGADIASLCSEAAMQQIREKMDLIDLEE 445
Query: 616 DKFLIDV-DSVTVEKYHFIEAMSTITPAAHRGATVHSRPLS---LVVAPCLQRHLQKAMN 671
+ +V +S+ V + +F A+ P+A R V + ++ + ++ L++ +
Sbjct: 446 ETIDTEVLNSLGVTQDNFRFALGNSNPSALRETVVENVNVTWDDIGGLDNIKNELKETVE 505
Query: 672 YISDIFPPLGMSSELTKLCMLSHGSAIPLVYRPRLLLCGSEGTGVDHLGPAILHELEKFP 731
Y P+ + K G A P +L G GTG L A+ E+
Sbjct: 506 Y------PVLHPDQYQKF-----GLA-PT---KGVLFFGPPGTGKTLLAKAVATEVSANF 550
Query: 732 VHSLGLPALLSDPSAKTPEEALVHIFGEARRTTPSILYIPQFN 774
+ G P LLS ++ E + IF +AR P+++++ + +
Sbjct: 551 ISVKG-PELLSMWYGES-ESNIRDIFDKARAAAPTVVFLDELD 591
Score = 423 (154.0 bits), Expect = 2.8e-36, P = 2.8e-36
Identities = 105/285 (36%), Positives = 155/285 (54%)
Query: 375 SVSFDDIGGLSEYIDALKEMVFFPLLYPDFFASYHITPPRGVLLCGPPGTGKTLIARALA 434
+V++DDIGGL + LKE V +P+L+PD + + + P +GVL GPPGTGKTL+A+A+A
Sbjct: 484 NVTWDDIGGLDNIKNELKETVEYPVLHPDQYQKFGLAPTKGVLFFGPPGTGKTLLAKAVA 543
Query: 435 CAASKAGQKVSFYMRKGADVLSKWVGEAERQLKLLFEEAQRNQPSIIFFDEIDGLAPVRS 494
S +F KG ++LS W GE+E ++ +F++A+ P+++F DE+D +A R
Sbjct: 544 TEVS-----ANFISVKGPELLSMWYGESESNIRDIFDKARAAAPTVVFLDELDSIAKARG 598
Query: 495 SKQEQIHNS---IVSTLLALMDGLDSRGQVVLIGATNRVDAIDGALRRPGRFDREFNFPL 551
+ +V+ LL MDG++++ V +IGATNR D ID AL RPGR D+ PL
Sbjct: 599 GSHGDAGGASDRVVNQLLTEMDGMNAKKNVFVIGATNRPDQIDPALLRPGRLDQLIYVPL 658
Query: 552 PGCEARAEILDIHTRKWKQPPSRELKSELAASCVGYCGADLKALCTEAA----------- 600
P AR IL R P +L +E+A G+ GADL + +A
Sbjct: 659 PDEPARLSILQAQLRNTPLEPGLDL-NEIAKITHGFSGADLSYIVQRSAKFAIKDSIEAQ 717
Query: 601 --IRAFREKYPQVYTSDDKFLIDV----DSVT-VEKYHFIEAMST 638
I +E+ +V T D +D D V + + HF EAM T
Sbjct: 718 VKINKIKEEKEKVKTEDVDMKVDEVEEEDPVPYITRAHFEEAMKT 762
>UNIPROTKB|Q59WG3 [details] [associations]
symbol:CDC48 "Putative uncharacterized protein CDC48"
species:237561 "Candida albicans SC5314" [GO:0005886 "plasma
membrane" evidence=IDA] [GO:0009986 "cell surface" evidence=IDA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 CGD:CAL0000732 Pfam:PF02359 GO:GO:0005886
GO:GO:0005524 GO:GO:0009986 eggNOG:COG0464 GO:GO:0017111
Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
InterPro:IPR015415 Pfam:PF09336 EMBL:AACQ01000114 EMBL:AACQ01000113
HOGENOM:HOG000223224 KO:K13525 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 RefSeq:XP_713945.1 RefSeq:XP_714003.1
ProteinModelPortal:Q59WG3 SMR:Q59WG3 STRING:Q59WG3 GeneID:3644394
GeneID:3644440 KEGG:cal:CaO19.2340 KEGG:cal:CaO19.9876
Uniprot:Q59WG3
Length = 826
Score = 562 (202.9 bits), Expect = 5.6e-52, P = 5.6e-52
Identities = 143/403 (35%), Positives = 226/403 (56%)
Query: 376 VSFDDIGGLSEYIDALKEMVFFPLLYPDFFASYHITPPRGVLLCGPPGTGKTLIARALAC 435
V +DDIGG + + ++E+V PL +P F S I PP+G+L+ GPPGTGKT++ARA+A
Sbjct: 212 VGYDDIGGCKKQMAQIRELVELPLRHPQLFKSIGIKPPKGILMYGPPGTGKTIMARAVA- 270
Query: 436 AASKAGQKVSFYMRKGADVLSKWVGEAERQLKLLFEEAQRNQPSIIFFDEIDGLAPVRSS 495
++ G F++ G +++SK GE+E L+ FEEA++N PSIIF DEID +AP R
Sbjct: 271 --NETG--AFFFLINGPEIMSKMAGESESNLRKAFEEAEKNSPSIIFIDEIDSIAPKRDK 326
Query: 496 KQEQIHNSIVSTLLALMDGLDSRGQVVLIGATNRVDAIDGALRRPGRFDREFNFPLPGCE 555
++ +VS LL LMDG+ +R VV+I ATNR ++ID ALRR GRFDRE + +P E
Sbjct: 327 TNGEVERRVVSQLLTLMDGMKARSNVVVIAATNRPNSIDPALRRFGRFDREVDIGVPDAE 386
Query: 556 ARAEILDIHTRKWKQPPSRELKSELAASCVGYCGADLKALCTEAAIRAFREKYPQVYTSD 615
R EIL IHT+ K +L++ +A+ G+ GAD+ +LC+EAA++ REK + +
Sbjct: 387 GRLEILRIHTKNMKLADDVDLEA-IASETHGFVGADIASLCSEAAMQQIREKMDLIDLEE 445
Query: 616 DKFLIDV-DSVTVEKYHFIEAMSTITPAAHRGATVHSRPLS---LVVAPCLQRHLQKAMN 671
+ +V +S+ V + +F A+ P+A R V + ++ + ++ L++ +
Sbjct: 446 ETIDTEVLNSLGVTQDNFRFALGNSNPSALRETVVENVNVTWDDIGGLDNIKNELKETVE 505
Query: 672 YISDIFPPLGMSSELTKLCMLSHGSAIPLVYRPRLLLCGSEGTGVDHLGPAILHELEKFP 731
Y P+ + K G A P +L G GTG L A+ E+
Sbjct: 506 Y------PVLHPDQYQKF-----GLA-PT---KGVLFFGPPGTGKTLLAKAVATEVSANF 550
Query: 732 VHSLGLPALLSDPSAKTPEEALVHIFGEARRTTPSILYIPQFN 774
+ G P LLS ++ E + IF +AR P+++++ + +
Sbjct: 551 ISVKG-PELLSMWYGES-ESNIRDIFDKARAAAPTVVFLDELD 591
Score = 423 (154.0 bits), Expect = 2.8e-36, P = 2.8e-36
Identities = 105/285 (36%), Positives = 155/285 (54%)
Query: 375 SVSFDDIGGLSEYIDALKEMVFFPLLYPDFFASYHITPPRGVLLCGPPGTGKTLIARALA 434
+V++DDIGGL + LKE V +P+L+PD + + + P +GVL GPPGTGKTL+A+A+A
Sbjct: 484 NVTWDDIGGLDNIKNELKETVEYPVLHPDQYQKFGLAPTKGVLFFGPPGTGKTLLAKAVA 543
Query: 435 CAASKAGQKVSFYMRKGADVLSKWVGEAERQLKLLFEEAQRNQPSIIFFDEIDGLAPVRS 494
S +F KG ++LS W GE+E ++ +F++A+ P+++F DE+D +A R
Sbjct: 544 TEVS-----ANFISVKGPELLSMWYGESESNIRDIFDKARAAAPTVVFLDELDSIAKARG 598
Query: 495 SKQEQIHNS---IVSTLLALMDGLDSRGQVVLIGATNRVDAIDGALRRPGRFDREFNFPL 551
+ +V+ LL MDG++++ V +IGATNR D ID AL RPGR D+ PL
Sbjct: 599 GSHGDAGGASDRVVNQLLTEMDGMNAKKNVFVIGATNRPDQIDPALLRPGRLDQLIYVPL 658
Query: 552 PGCEARAEILDIHTRKWKQPPSRELKSELAASCVGYCGADLKALCTEAA----------- 600
P AR IL R P +L +E+A G+ GADL + +A
Sbjct: 659 PDEPARLSILQAQLRNTPLEPGLDL-NEIAKITHGFSGADLSYIVQRSAKFAIKDSIEAQ 717
Query: 601 --IRAFREKYPQVYTSDDKFLIDV----DSVT-VEKYHFIEAMST 638
I +E+ +V T D +D D V + + HF EAM T
Sbjct: 718 VKINKIKEEKEKVKTEDVDMKVDEVEEEDPVPYITRAHFEEAMKT 762
>UNIPROTKB|F1NLN4 [details] [associations]
symbol:SPATA5 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 Pfam:PF02359 GO:GO:0005524 GO:GO:0005737
GeneTree:ENSGT00700000104502 GO:GO:0017111 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 SMART:SM01073 OMA:NDIRPSA
EMBL:AADN02009235 IPI:IPI00593232 Ensembl:ENSGALT00000019309
Uniprot:F1NLN4
Length = 704
Score = 535 (193.4 bits), Expect = 8.0e-51, P = 8.0e-51
Identities = 145/403 (35%), Positives = 212/403 (52%)
Query: 376 VSFDDIGGLSEYIDALKEMVFFPLLYPDFFASYHITPPRGVLLCGPPGTGKTLIARALAC 435
V++D IGGLS + ++E V PL + F SY I+PPRGVLL GPPGTGKTLIA+A+A
Sbjct: 315 VTYDMIGGLSSQLKTIRETVELPLKRAELFKSYGISPPRGVLLYGPPGTGKTLIAKAIA- 373
Query: 436 AASKAGQKVSFYMRKGADVLSKWVGEAERQLKLLFEEAQRNQPSIIFFDEIDGLAPVRSS 495
++ G V+ G +++SK+ GE+E +L+ +F EA +PSIIF DE+D L P R
Sbjct: 374 --NEVGAHVTVI--NGPEIISKFYGESESRLRQIFAEASLRRPSIIFIDELDALCPKREG 429
Query: 496 KQEQIHNSIVSTLLALMDGLDSRG---QVVLIGATNRVDAIDGALRRPGRFDREFNFPLP 552
Q ++ +V++LL LMDG+ S G Q+V++GATNR A+D ALRRPGRFD+E +P
Sbjct: 430 AQNEVEKRVVASLLTLMDGIGSEGSEGQLVVLGATNRPHALDAALRRPGRFDKEIEIGIP 489
Query: 553 GCEARAEILDIHTRKWKQPPSRELKSELAASCVGYCGADLKALCTEAAIRAFREKY-PQV 611
+ R +IL +K + +LA S GY GADL ALC EA + A R +
Sbjct: 490 NAQDRLDILQKLLKKVPHSLTAAEMMQLADSAHGYVGADLAALCKEAGLYALRRALGKRA 549
Query: 612 YTSDDKFLIDVDSVTVEKYHFIEAMSTITPAAHRGATVHSRPLSLVVAPCLQRHLQKAMN 671
+ SD + SV + F++ M + P+A R V +S L+ K
Sbjct: 550 HPSDTEV---AGSVMIAFNDFLQGMKDVRPSAMREVAVDVPKVSWSDIGGLEDVKLKLKQ 606
Query: 672 YISDIFPPLGMSSELTKLCMLSHGSAIPLVYRPRLLLCGSEGTGVDHLGPAILHELEKFP 731
+ PL ++ G P +LL G G + A+ HE
Sbjct: 607 AVEW---PLKHPDSFIRM-----GIQPP----KGVLLYGPPGCSKTMIAKALAHESGLNF 654
Query: 732 VHSLGLPALLSDPSAKTPEEALVHIFGEARRTTPSILYIPQFN 774
+ G P L++ ++ E A+ IF +AR +PSIL+ + +
Sbjct: 655 LAVKG-PELMNKYVGES-ERAVREIFRKARMVSPSILFFDEID 695
Score = 265 (98.3 bits), Expect = 3.4e-19, P = 3.4e-19
Identities = 69/171 (40%), Positives = 100/171 (58%)
Query: 331 WGLNVAASGWGHQGDTLAALTSGIQTAGPSSKGGADIQP-----LQVD-ESVSFDDIGGL 384
+ L A H DT A S + +G D++P + VD VS+ DIGGL
Sbjct: 539 YALRRALGKRAHPSDTEVA-GSVMIAFNDFLQGMKDVRPSAMREVAVDVPKVSWSDIGGL 597
Query: 385 SEYIDALKEMVFFPLLYPDFFASYHITPPRGVLLCGPPGTGKTLIARALACAASKAGQKV 444
+ LK+ V +PL +PD F I PP+GVLL GPPG KT+IA+ALA ++G +
Sbjct: 598 EDVKLKLKQAVEWPLKHPDSFIRMGIQPPKGVLLYGPPGCSKTMIAKALA---HESG--L 652
Query: 445 SFYMRKGADVLSKWVGEAERQLKLLFEEAQRNQPSIIFFDEIDGLAPVRSS 495
+F KG ++++K+VGE+ER ++ +F +A+ PSI+FFDEID LA R +
Sbjct: 653 NFLAVKGPELMNKYVGESERAVREIFRKARMVSPSILFFDEIDALAVERGN 703
>UNIPROTKB|F1MFP1 [details] [associations]
symbol:SPATA5 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 GO:GO:0005524 GO:GO:0005737
GeneTree:ENSGT00700000104502 GO:GO:0017111 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 SMART:SM01073 OMA:NDIRPSA
EMBL:DAAA02044760 EMBL:DAAA02044756 EMBL:DAAA02044757
EMBL:DAAA02044758 EMBL:DAAA02044759 IPI:IPI00912761
Ensembl:ENSBTAT00000000136 Uniprot:F1MFP1
Length = 771
Score = 544 (196.6 bits), Expect = 2.7e-50, P = 2.7e-50
Identities = 148/433 (34%), Positives = 226/433 (52%)
Query: 345 DTLAALTSGIQTAGPSSKGGADIQPLQVDESVSFDDIGGLSEYIDALKEMVFFPLLYPDF 404
DT ++S + + ++ + Q Q+ V++D IGGL+ + ++E++ PL P+
Sbjct: 312 DTFYFISSKTRVSFTKNRTNSKDQANQL--KVTYDMIGGLNSQLKEIREIIELPLKQPEL 369
Query: 405 FASYHITPPRGVLLCGPPGTGKTLIARALACAASKAGQKVSFYMRKGADVLSKWVGEAER 464
F SY I PPRGVLL GPPGTGKT+IARA+A ++ G VS G +++SK+ GE E
Sbjct: 370 FKSYGIPPPRGVLLYGPPGTGKTMIARAVA---NEVGAYVSVI--NGPEIISKFYGETEA 424
Query: 465 QLKLLFEEAQRNQPSIIFFDEIDGLAPVRSSKQEQIHNSIVSTLLALMDGLDSRG---QV 521
+L+ +F EA PSIIF DE+D L P R Q ++ +V++LL LMDG+ S G QV
Sbjct: 425 RLRQIFAEATLRHPSIIFIDELDALCPKREGAQNEVEKRVVASLLTLMDGIGSEGSEGQV 484
Query: 522 VLIGATNRVDAIDGALRRPGRFDREFNFPLPGCEARAEILDIHTRKWKQPPSRELKSELA 581
+++GATNR A+D ALRRPGRFD+E +P + R +IL R+ + +LA
Sbjct: 485 LVLGATNRPHALDAALRRPGRFDKEIEIGVPNAQDRLDILQKLLRRVPHLLTEAELLQLA 544
Query: 582 ASCVGYCGADLKALCTEAAIRAFREKYPQVYTSDDKFLIDVDSVTVEKYHFIEAMSTITP 641
S GY GADLKALC EA + A R + D + + +T++ F++ M+ I P
Sbjct: 545 NSAHGYVGADLKALCNEAGLHALRRVLRRQPNLPDSKMAGLVKITLKD--FLQGMNDIRP 602
Query: 642 AAHRGATVHSRPLSLVVAPCLQRHLQKAMNYISDIFPPLGMSSELTKLCMLSHGSAIPLV 701
+A R V +S L+ K + PL T++ G P
Sbjct: 603 SAMREVAVDVPNVSWSDIGGLENVKLKLKQAVEW---PLKHPESFTQM-----GIQPP-- 652
Query: 702 YRPRLLLCGSEGTGVDHLGPAILHELEKFPVHSLGLPALLSDPSAKTPEEALVHIFGEAR 761
+LL G G + A+ +E ++ P L++ ++ E A+ IF +AR
Sbjct: 653 --KGVLLYGPPGCSKTMIAKALANE-SGLNFLAIKGPELMNKYVGES-ERAVREIFRKAR 708
Query: 762 RTTPSILYIPQFN 774
PSI++ + +
Sbjct: 709 AVAPSIIFFDELD 721
Score = 322 (118.4 bits), Expect = 2.6e-25, P = 2.6e-25
Identities = 78/192 (40%), Positives = 118/192 (61%)
Query: 346 TLAALTSGIQTAGPSSKGGADIQPLQVD-ESVSFDDIGGLSEYIDALKEMVFFPLLYPDF 404
TL G+ PS+ ++ + VD +VS+ DIGGL LK+ V +PL +P+
Sbjct: 589 TLKDFLQGMNDIRPSA-----MREVAVDVPNVSWSDIGGLENVKLKLKQAVEWPLKHPES 643
Query: 405 FASYHITPPRGVLLCGPPGTGKTLIARALACAASKAGQKVSFYMRKGADVLSKWVGEAER 464
F I PP+GVLL GPPG KT+IA+ALA +++G ++F KG ++++K+VGE+ER
Sbjct: 644 FTQMGIQPPKGVLLYGPPGCSKTMIAKALA---NESG--LNFLAIKGPELMNKYVGESER 698
Query: 465 QLKLLFEEAQRNQPSIIFFDEIDGLAPVR--SSKQEQIHNSIVSTLLALMDGLDSRGQVV 522
++ +F +A+ PSIIFFDE+D LA R SS + + +++ LL MDG++ V
Sbjct: 699 AVREIFRKARAVAPSIIFFDELDALAVERGSSSGAGNVADRVLAQLLTEMDGIEQLKNVT 758
Query: 523 LIGATNRVDAID 534
++ ATNR D ID
Sbjct: 759 ILAATNRPDRID 770
>UNIPROTKB|F1P4V8 [details] [associations]
symbol:LOC426240 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 Pfam:PF02359 GO:GO:0005524 GO:GO:0017111
Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
InterPro:IPR015415 Pfam:PF09336 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 OMA:DIRRYEE GeneTree:ENSGT00700000104534
EMBL:AADN02060646 EMBL:AADN02060647 EMBL:AADN02060648
EMBL:AADN02060649 EMBL:AADN02060650 EMBL:AADN02060651
EMBL:AADN02060652 EMBL:AADN02060653 IPI:IPI00585183
Ensembl:ENSGALT00000003093 ArrayExpress:F1P4V8 Uniprot:F1P4V8
Length = 810
Score = 544 (196.6 bits), Expect = 6.0e-50, P = 6.0e-50
Identities = 150/408 (36%), Positives = 218/408 (53%)
Query: 376 VSFDDIGGLSEYIDALKEMVFFPLLYPDFFASYHITPPRGVLLCGPPGTGKTLIARALAC 435
V +DDIGG + + +KEMV PL +P F + + PPRG+LL GPPGTGKTLIARA+A
Sbjct: 201 VGYDDIGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILLYGPPGTGKTLIARAVA- 259
Query: 436 AASKAGQKVSFYMRKGADVLSKWVGEAERQLKLLFEEAQRNQPSIIFFDEIDGLAPVRSS 495
++ G F++ G +++SK GE+E L+ FEE ++N P+IIF DE+D +A
Sbjct: 260 --NETG--AFFFLINGPEIMSKLAGESESNLRKAFEETEKNAPAIIFIDELDAIASDDCF 315
Query: 496 KQEQIHNS----IVSTLLALMDGLDSRGQVVLIGATNRVDAIDGALRRPGRFDREFNFPL 551
Q H IVS LL LMDGL R V+++ ATNR ++ID ALRR GRFDRE + +
Sbjct: 316 PSPQTHGEVERRIVSQLLTLMDGLKQRAHVIVMAATNRPNSIDPALRRFGRFDREVDIGI 375
Query: 552 PGCEARAEILDIHTRKWKQPPSRELKSELAASCVGYCGADLKALCTEAAIRAFREKYPQV 611
P R EIL IHT+ K +L+ ++A G+ GADL ALC+EAA++A R+K +
Sbjct: 376 PDATGRLEILQIHTKNMKLADDVDLE-QVANETHGHVGADLAALCSEAALQAIRKKMDLI 434
Query: 612 YTSDDKFLIDV-DSVTVEKYHFIEAMSTITPAAHRGATVHSRPLSLVVAPCLQ---RHLQ 667
D+ +V +S+ V F A+S P+A R V ++ L+ R LQ
Sbjct: 435 DLEDETIDAEVMNSLAVTMDDFRWALSQSNPSALRETVVEVPQVTWEDIGGLEDVKRELQ 494
Query: 668 KAMNYISDIFPPLGMSSELTKLCML-SHGSAIPLVYRPRLLLCGSEGTGVDHLGPAILHE 726
+ + Y P+ + K M S G +L G G G L AI +E
Sbjct: 495 ELVQY------PVEHPDKFLKFGMTPSKG----------VLFYGPPGCGKTLLAKAIANE 538
Query: 727 LEKFPVHSLGLPALLSDPSAKTPEEALVHIFGEARRTTPSILYIPQFN 774
+ + G P LL+ ++ E + IF +AR+ P +L+ + +
Sbjct: 539 CQANFISIKG-PELLTMWFGES-EANVREIFDKARQAAPCVLFFDELD 584
Score = 407 (148.3 bits), Expect = 4.2e-34, Sum P(2) = 4.2e-34
Identities = 87/235 (37%), Positives = 140/235 (59%)
Query: 376 VSFDDIGGLSEYIDALKEMVFFPLLYPDFFASYHITPPRGVLLCGPPGTGKTLIARALAC 435
V+++DIGGL + L+E+V +P+ +PD F + +TP +GVL GPPG GKTL+A+A+A
Sbjct: 478 VTWEDIGGLEDVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIAN 537
Query: 436 AASKAGQKVSFYMRKGADVLSKWVGEAERQLKLLFEEAQRNQPSIIFFDEIDGLAPVRSS 495
+ +F KG ++L+ W GE+E ++ +F++A++ P ++FFDE+D +A R
Sbjct: 538 EC-----QANFISIKGPELLTMWFGESEANVREIFDKARQAAPCVLFFDELDSIAKARGG 592
Query: 496 KQEQ---IHNSIVSTLLALMDGLDSRGQVVLIGATNRVDAIDGALRRPGRFDREFNFPLP 552
+ +++ +L MDG+ ++ V +IGATNR D ID A+ RPGR D+ PLP
Sbjct: 593 NIGDGGGAADRVINQILTEMDGMSTKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPLP 652
Query: 553 GCEARAEILDIHTRKWKQPPSRELKSELAASCV-GYCGADLKALCTEAAIRAFRE 606
++R IL + RK P ++++ + A G+ GADL +C A A RE
Sbjct: 653 DEKSRVAILKANLRK--SPVAKDVDLDFLAKMTNGFSGADLTEICQRACKLAIRE 705
Score = 44 (20.5 bits), Expect = 4.2e-34, Sum P(2) = 4.2e-34
Identities = 17/55 (30%), Positives = 28/55 (50%)
Query: 335 VAASGWGHQGDTLAALTSGIQTAGPSSKGGADIQPLQVDESVSFDDIGGLSEYID 389
VA GH G LAAL S + A + + D+ L+ DE++ + + L+ +D
Sbjct: 403 VANETHGHVGADLAALCS--EAALQAIRKKMDLIDLE-DETIDAEVMNSLAVTMD 454
>UNIPROTKB|F1RQN5 [details] [associations]
symbol:SPATA5 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 GO:GO:0005524 GO:GO:0005737
GeneTree:ENSGT00700000104502 GO:GO:0017111 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 SMART:SM01073 OMA:NDIRPSA
EMBL:FP102941 EMBL:CU463172 Ensembl:ENSSSCT00000009950
Uniprot:F1RQN5
Length = 778
Score = 539 (194.8 bits), Expect = 2.1e-49, Sum P(2) = 2.1e-49
Identities = 142/402 (35%), Positives = 214/402 (53%)
Query: 376 VSFDDIGGLSEYIDALKEMVFFPLLYPDFFASYHITPPRGVLLCGPPGTGKTLIARALAC 435
V++D IGGL+ + ++E++ PL P+ F SY I+PPRGVLL GPPGTGKT+IARA+A
Sbjct: 344 VTYDMIGGLNSQLKEIREIIELPLKQPELFKSYGISPPRGVLLYGPPGTGKTMIARAVA- 402
Query: 436 AASKAGQKVSFYMRKGADVLSKWVGEAERQLKLLFEEAQRNQPSIIFFDEIDGLAPVRSS 495
++ G VS G +++SK+ GE E +L+ +F EA PSIIF DE+D L P R
Sbjct: 403 --NEVGAYVSVI--NGPEIISKFYGETEARLRQIFAEATLRHPSIIFIDELDALCPKREG 458
Query: 496 KQEQIHNSIVSTLLALMDGLDSRG---QVVLIGATNRVDAIDGALRRPGRFDREFNFPLP 552
Q ++ +V++LL LMDG+ S G QV+++GATNR A+D ALRRPGRFD+E +P
Sbjct: 459 AQNEVEKRVVASLLTLMDGIGSEGSEGQVLVLGATNRPHALDAALRRPGRFDKEIEIGVP 518
Query: 553 GCEARAEILDIHTRKWKQPPSRELKSELAASCVGYCGADLKALCTEAAIRAFREKYPQVY 612
+ R +IL R+ + +LA S GY GADLKALC EA + A R +
Sbjct: 519 NAQDRLDILQKLLRRVPHLLTEAELLQLANSAHGYVGADLKALCNEAGLYALRRVLRKQP 578
Query: 613 TSDDKFLIDVDSVTVEKYHFIEAMSTITPAAHRGATVHSRPLSLVVAPCLQRHLQKAMNY 672
D + + +T++ F++ M+ I P+A R + +S L+ K
Sbjct: 579 NLPDSKVAGLVKITLKD--FLQGMNDIRPSAMREVAIDVPNVSWSDIGGLENIKLKLKQA 636
Query: 673 ISDIFPPLGMSSELTKLCMLSHGSAIPLVYRPRLLLCGSEGTGVDHLGPAILHELEKFPV 732
+ PL T++ G P +LL G G + A+ +E
Sbjct: 637 VEW---PLKHPESFTQM-----GIQPP----KGVLLYGPPGCSKTMIAKALANE-SGLNF 683
Query: 733 HSLGLPALLSDPSAKTPEEALVHIFGEARRTTPSILYIPQFN 774
++ P L++ ++ E A+ IF +AR PSI++ + +
Sbjct: 684 LAIKGPELMNKYVGES-ERAVREIFRKARAVAPSIIFFDELD 724
Score = 325 (119.5 bits), Expect = 2.0e-24, Sum P(2) = 2.0e-24
Identities = 79/197 (40%), Positives = 120/197 (60%)
Query: 346 TLAALTSGIQTAGPSSKGGADIQPLQVD-ESVSFDDIGGLSEYIDALKEMVFFPLLYPDF 404
TL G+ PS+ ++ + +D +VS+ DIGGL LK+ V +PL +P+
Sbjct: 592 TLKDFLQGMNDIRPSA-----MREVAIDVPNVSWSDIGGLENIKLKLKQAVEWPLKHPES 646
Query: 405 FASYHITPPRGVLLCGPPGTGKTLIARALACAASKAGQKVSFYMRKGADVLSKWVGEAER 464
F I PP+GVLL GPPG KT+IA+ALA +++G ++F KG ++++K+VGE+ER
Sbjct: 647 FTQMGIQPPKGVLLYGPPGCSKTMIAKALA---NESG--LNFLAIKGPELMNKYVGESER 701
Query: 465 QLKLLFEEAQRNQPSIIFFDEIDGLAPVR--SSKQEQIHNSIVSTLLALMDGLDSRGQVV 522
++ +F +A+ PSIIFFDE+D LA R SS + + +++ LL MDG++ V
Sbjct: 702 AVREIFRKARAVAPSIIFFDELDALAVERGSSSGAGNVADRVLAQLLTEMDGIEQLKDVT 761
Query: 523 LIGATNRVDAIDGALRR 539
++ ATNR D ID L R
Sbjct: 762 ILAATNRPDRIDKELLR 778
Score = 38 (18.4 bits), Expect = 2.1e-49, Sum P(2) = 2.1e-49
Identities = 8/16 (50%), Positives = 10/16 (62%)
Query: 115 RNRMRNNMSQDELSPS 130
+NR R N S + SPS
Sbjct: 5 KNRKRLNQSTENSSPS 20
>UNIPROTKB|F1SCW5 [details] [associations]
symbol:F1SCW5 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 Pfam:PF00004 SMART:SM00382
GO:GO:0005524 GO:GO:0017111 GeneTree:ENSGT00550000074694
EMBL:CU467526 EMBL:CU928810 Ensembl:ENSSSCT00000009401 OMA:WNISAGQ
Uniprot:F1SCW5
Length = 528
Score = 499 (180.7 bits), Expect = 6.4e-49, Sum P(2) = 6.4e-49
Identities = 94/137 (68%), Positives = 113/137 (82%)
Query: 365 ADIQPLQVDESVSFDDIGGLSEYIDALKEMVFFPLLYPDFFASYHITPPRGVLLCGPPGT 424
AD+ P+ +D+SV FD IGGLS +I ALKEMV FPLLYP+ F + I PPRG L GPPGT
Sbjct: 391 ADVDPMNIDKSVRFDSIGGLSHHIHALKEMVVFPLLYPEIFEKFKIQPPRGCLFYGPPGT 450
Query: 425 GKTLIARALACAASKAGQKVSFYMRKGADVLSKWVGEAERQLKLLFEEAQRNQPSIIFFD 484
GKTL+ARALA S+ +KV+F+MRKGAD LSKWVGE+ERQL+LLF++A +PSIIFFD
Sbjct: 451 GKTLVARALANECSQGDKKVAFFMRKGADCLSKWVGESERQLRLLFDQAYLMRPSIIFFD 510
Query: 485 EIDGLAPVRSSKQEQIH 501
EIDGLAPVRSS+Q+QIH
Sbjct: 511 EIDGLAPVRSSRQDQIH 527
Score = 44 (20.5 bits), Expect = 6.4e-49, Sum P(2) = 6.4e-49
Identities = 24/93 (25%), Positives = 39/93 (41%)
Query: 39 PIRPRKSKTKARTAASQIARMFGPGKRTVRTSNKNSVPLN-LRRS-TRKRRISVNLEDYT 96
P R+ KT R A I P + R S + + RRS R+++ +++ D T
Sbjct: 288 PYNLRQRKTVDRYQAPPIV----PAHQKKRESTLFDIHRSPARRSHIRRKKHAIHSSDTT 343
Query: 97 DSSGSEDEDLMRPSYRPLRNR-MRNNMSQDELS 128
S E S RNR + N+ ++L+
Sbjct: 344 SSDEERFERRKSKSMARARNRCLPMNLRAEDLA 376
Score = 44 (20.5 bits), Expect = 6.4e-49, Sum P(2) = 6.4e-49
Identities = 29/125 (23%), Positives = 46/125 (36%)
Query: 59 MFGPGKRTVRTSNKNSVPLNLRR--STR-KRRISVNLEDYTDSSGSEDEDLM-RPSYRPL 114
M+ KR ++ +NS + ST + + LE + E E+ + RP
Sbjct: 230 MYSRVKRRRKSLRRNSYGIQNHHEVSTEGEEEVCGKLESQEEDGDIEVEEAEGEENDRPY 289
Query: 115 RNRMRNNMSQDELSPSKRKKVVEAKPTPRREGL-----RPRRSMVATRKQLNLDSGDEQG 169
R R + + + P +V A R L P R RK+ + S D
Sbjct: 290 NLRQRKTVDRYQAPP-----IVPAHQKKRESTLFDIHRSPARRSHIRRKKHAIHSSDTTS 344
Query: 170 SSEEK 174
S EE+
Sbjct: 345 SDEER 349
Score = 42 (19.8 bits), Expect = 1.0e-48, Sum P(2) = 1.0e-48
Identities = 14/51 (27%), Positives = 25/51 (49%)
Query: 143 RREGLRPRRSMVATRKQLNLDSGDEQ--GS--SEEKVGQDETENGNESDND 189
RR+ LR + +++ + G+E+ G S+E+ G E E +ND
Sbjct: 237 RRKSLRRNSYGIQNHHEVSTE-GEEEVCGKLESQEEDGDIEVEEAEGEEND 286
>UNIPROTKB|E2RC37 [details] [associations]
symbol:SPATA5 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524 KO:K14575
GeneTree:ENSGT00700000104502 GO:GO:0017111 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 CTD:166378 OMA:NDIRPSA
EMBL:AAEX03011797 RefSeq:XP_540960.2 ProteinModelPortal:E2RC37
Ensembl:ENSCAFT00000006393 GeneID:483840 KEGG:cfa:483840
Uniprot:E2RC37
Length = 893
Score = 534 (193.0 bits), Expect = 1.7e-48, P = 1.7e-48
Identities = 122/280 (43%), Positives = 170/280 (60%)
Query: 376 VSFDDIGGLSEYIDALKEMVFFPLLYPDFFASYHITPPRGVLLCGPPGTGKTLIARALAC 435
V++D IGGLS + A++E++ PL P+ F SY I PPRGVLL GPPGTGKT+IARA+A
Sbjct: 350 VTYDMIGGLSSQLKAIREIIELPLKQPELFKSYGIPPPRGVLLYGPPGTGKTMIARAVA- 408
Query: 436 AASKAGQKVSFYMRKGADVLSKWVGEAERQLKLLFEEAQRNQPSIIFFDEIDGLAPVRSS 495
++ G VS G +++SK+ GE E +L+ +F EA PSIIF DE+D L P R
Sbjct: 409 --NEVGAYVSVI--NGPEIISKFYGETEARLRQIFAEATLRHPSIIFIDELDALCPKREG 464
Query: 496 KQEQIHNSIVSTLLALMDGLDSRG---QVVLIGATNRVDAIDGALRRPGRFDREFNFPLP 552
Q ++ +V++LL LMDG+ S G QV+++GATNR A+D ALRRPGRFD+E +P
Sbjct: 465 AQNEVEKRVVASLLTLMDGIGSEGSEGQVLVLGATNRPHALDAALRRPGRFDKEIEIGVP 524
Query: 553 GCEARAEILDIHTRKWKQPPSRELKSELAASCVGYCGADLKALCTEAAIRAFRE---KYP 609
R +IL ++ + +LA S GY GADLKALC EA + A R K P
Sbjct: 525 NAADRLDILQKLLQRVPHLLTEVELLQLANSAHGYVGADLKALCNEAGLYALRRVLNKQP 584
Query: 610 QVYTSDDKFLIDVDSVTVEKYHFIEAMSTITPAAHRGATV 649
+ SD K + + +T+ F++ M+ I P+A R +
Sbjct: 585 NL--SDSK-MAGLVKITLND--FLQGMNDIRPSAMREVAI 619
Score = 428 (155.7 bits), Expect = 9.9e-37, P = 9.9e-37
Identities = 105/254 (41%), Positives = 151/254 (59%)
Query: 362 KGGADIQPLQVDE------SVSFDDIGGLSEYIDALKEMVFFPLLYPDFFASYHITPPRG 415
+G DI+P + E +VS+ DIGGL LK+ V +PL +P+ F I PP+G
Sbjct: 604 QGMNDIRPSAMREVAIDVPNVSWSDIGGLENIKLKLKQAVEWPLKHPESFIRMGIQPPKG 663
Query: 416 VLLCGPPGTGKTLIARALACAASKAGQKVSFYMRKGADVLSKWVGEAERQLKLLFEEAQR 475
VLL GPPG KT+IA+ALA +++G ++F KG ++++K+VGE+ER ++ +F +A+
Sbjct: 664 VLLYGPPGCSKTMIAKALA---NESG--LNFLAIKGPELMNKYVGESERAVREIFRKARA 718
Query: 476 NQPSIIFFDEIDGLAPVR--SSKQEQIHNSIVSTLLALMDGLDSRGQVVLIGATNRVDAI 533
PSIIFFDE+D LA R SS + + +++ LL MDG++ V ++ ATNR D I
Sbjct: 719 VSPSIIFFDELDALAIERGSSSGAGNVADRVLAQLLTEMDGIEQLKDVTILAATNRPDRI 778
Query: 534 DGALRRPGRFDREFNFPLPGCEARAEILDIHTRKWKQPPSRELK-SELAASCVGYCGADL 592
D AL RPGR DR PLP R EIL++ P S ++ EL Y GA++
Sbjct: 779 DKALMRPGRIDRIIYVPLPDAATRREILNLQFHS--MPISNDVNLDELIFQTDTYSGAEI 836
Query: 593 KALCTEAAIRAFRE 606
A+C EAA+ A E
Sbjct: 837 IAVCREAALLALEE 850
Score = 362 (132.5 bits), Expect = 1.6e-29, P = 1.6e-29
Identities = 107/341 (31%), Positives = 167/341 (48%)
Query: 437 ASKAGQKVSFYMRKGADVLSKWVGEAERQLKLLFEEAQRNQPSIIFFDEIDGLAPVRSSK 496
A++ G VS G +++SK+ GE E +L+ +F EA PSIIF DE+D L P R
Sbjct: 408 ANEVGAYVSVI--NGPEIISKFYGETEARLRQIFAEATLRHPSIIFIDELDALCPKREGA 465
Query: 497 QEQIHNSIVSTLLALMDGLDSRG---QVVLIGATNRVDAIDGALRRPGRFDREFNFPLPG 553
Q ++ +V++LL LMDG+ S G QV+++GATNR A+D ALRRPGRFD+E +P
Sbjct: 466 QNEVEKRVVASLLTLMDGIGSEGSEGQVLVLGATNRPHALDAALRRPGRFDKEIEIGVPN 525
Query: 554 CEARAEILDIHTRKWKQPPSRELKSELAASCVGYCGADLKALCTEAAIRAFREKYPQVYT 613
R +IL ++ + +LA S GY GADLKALC EA + A R +
Sbjct: 526 AADRLDILQKLLQRVPHLLTEVELLQLANSAHGYVGADLKALCNEAGLYALRRVLNKQPN 585
Query: 614 SDDKFLIDVDSVTVEKYHFIEAMSTITPAAHRGATVHSRPLSLVVAPCLQRHLQKAMNYI 673
D + + +T+ F++ M+ I P+A R + +S L+ K +
Sbjct: 586 LSDSKMAGLVKITLND--FLQGMNDIRPSAMREVAIDVPNVSWSDIGGLENIKLKLKQAV 643
Query: 674 SDIFPPLGMSSELTKLCMLSHGSAIPLVYRPRLLLCGSEGTGVDHLGPAILHELEKFPVH 733
PL ++ G P +LL G G + A+ +E
Sbjct: 644 EW---PLKHPESFIRM-----GIQPP----KGVLLYGPPGCSKTMIAKALANE-SGLNFL 690
Query: 734 SLGLPALLSDPSAKTPEEALVHIFGEARRTTPSILYIPQFN 774
++ P L++ ++ E A+ IF +AR +PSI++ + +
Sbjct: 691 AIKGPELMNKYVGES-ERAVREIFRKARAVSPSIIFFDELD 730
Score = 309 (113.8 bits), Expect = 9.2e-24, P = 9.2e-24
Identities = 77/208 (37%), Positives = 118/208 (56%)
Query: 437 ASKAGQKVSFYMRKGADVLSKWVGEAERQLKLLFEEAQRNQPSIIFFDEIDGLAPVR--S 494
A+++G ++F KG ++++K+VGE+ER ++ +F +A+ PSIIFFDE+D LA R S
Sbjct: 682 ANESG--LNFLAIKGPELMNKYVGESERAVREIFRKARAVSPSIIFFDELDALAIERGSS 739
Query: 495 SKQEQIHNSIVSTLLALMDGLDSRGQVVLIGATNRVDAIDGALRRPGRFDREFNFPLPGC 554
S + + +++ LL MDG++ V ++ ATNR D ID AL RPGR DR PLP
Sbjct: 740 SGAGNVADRVLAQLLTEMDGIEQLKDVTILAATNRPDRIDKALMRPGRIDRIIYVPLPDA 799
Query: 555 EARAEILDIHTRKWKQPPSRELK-SELAASCVGYCGADLKALCTEAAIRAFREKYPQVYT 613
R EIL++ P S ++ EL Y GA++ A+C EAA+ A E
Sbjct: 800 ATRREILNLQFHS--MPISNDVNLDELIFQTDTYSGAEIIAVCREAALLALEE------- 850
Query: 614 SDDKFLIDVDSVTVEKYHFIEAMSTITP 641
D+ + ++ + HF A+ST+TP
Sbjct: 851 -------DIQANSITRRHFTRALSTVTP 871
>MGI|MGI:1927170 [details] [associations]
symbol:Spata5 "spermatogenesis associated 5" species:10090
"Mus musculus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0007283
"spermatogenesis" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030154
"cell differentiation" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 InterPro:IPR003338 MGI:MGI:1927170 GO:GO:0007275
GO:GO:0005739 GO:GO:0005524 GO:GO:0030154 GO:GO:0007283
eggNOG:COG0464 HOGENOM:HOG000223225 KO:K14575
GeneTree:ENSGT00700000104502 GO:GO:0017111 HSSP:Q9WZ49
Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692 SMART:SM01073
CTD:166378 HOVERGEN:HBG108504 OMA:NDIRPSA OrthoDB:EOG43FGWF
EMBL:AF049099 EMBL:AK011111 EMBL:AK144998 EMBL:AL669927
EMBL:AL627074 EMBL:AL645968 IPI:IPI00649667 RefSeq:NP_001156983.1
RefSeq:NP_067318.2 UniGene:Mm.172679 ProteinModelPortal:Q3UMC0
SMR:Q3UMC0 PhosphoSite:Q3UMC0 PaxDb:Q3UMC0 PRIDE:Q3UMC0
Ensembl:ENSMUST00000029277 Ensembl:ENSMUST00000108112 GeneID:57815
KEGG:mmu:57815 UCSC:uc008pau.2 InParanoid:Q3UMC0 NextBio:314006
Bgee:Q3UMC0 Genevestigator:Q3UMC0 Uniprot:Q3UMC0
Length = 893
Score = 521 (188.5 bits), Expect = 5.0e-47, P = 5.0e-47
Identities = 114/277 (41%), Positives = 166/277 (59%)
Query: 376 VSFDDIGGLSEYIDALKEMVFFPLLYPDFFASYHITPPRGVLLCGPPGTGKTLIARALAC 435
V++D IGGL+ + A++E++ PL P+ F SY I PRG+LL GPPGTGKT+IARA+A
Sbjct: 350 VTYDMIGGLNSQLKAIREIIELPLKQPELFKSYGIPAPRGLLLYGPPGTGKTMIARAVA- 408
Query: 436 AASKAGQKVSFYMRKGADVLSKWVGEAERQLKLLFEEAQRNQPSIIFFDEIDGLAPVRSS 495
++ G VS G +++SK+ GE E +L+ +F EA PSIIF DE+D L P R
Sbjct: 409 --NEVGAYVSVI--NGPEIISKFYGETEARLRQIFAEATLRHPSIIFIDELDALCPKREG 464
Query: 496 KQEQIHNSIVSTLLALMDGLDSRG---QVVLIGATNRVDAIDGALRRPGRFDREFNFPLP 552
Q ++ +V++LL LMDG+ S G +V+++GATNR A+D ALRRPGRFD+E +P
Sbjct: 465 AQSEVEKRVVASLLTLMDGIGSEGSEGRVLVLGATNRPQALDAALRRPGRFDKEIEIGIP 524
Query: 553 GCEARAEILDIHTRKWKQPPSRELKSELAASCVGYCGADLKALCTEAAIRAFREKYPQVY 612
+ R +IL R+ ++ LA + GY GADLKALC EA + A R +
Sbjct: 525 NAQDRLDILQKLLRRVPHLLTKAELLRLANNAHGYVGADLKALCNEAGLHALRRVLRKQP 584
Query: 613 TSDDKFLIDVDSVTVEKYHFIEAMSTITPAAHRGATV 649
D + + +T+ F++ M+ I P+A R +
Sbjct: 585 NLPDSKVAGMVKITLND--FLQGMNDIRPSAMREVAI 619
Score = 427 (155.4 bits), Expect = 1.3e-36, P = 1.3e-36
Identities = 106/254 (41%), Positives = 150/254 (59%)
Query: 362 KGGADIQPLQVDE------SVSFDDIGGLSEYIDALKEMVFFPLLYPDFFASYHITPPRG 415
+G DI+P + E +VS+ DIGGL LK+ V +PL +P F I PP+G
Sbjct: 604 QGMNDIRPSAMREVAIDVPNVSWSDIGGLENIKLKLKQAVEWPLKHPKSFNRMGIQPPKG 663
Query: 416 VLLCGPPGTGKTLIARALACAASKAGQKVSFYMRKGADVLSKWVGEAERQLKLLFEEAQR 475
VLL GPPG KT+IA+ALA +++G ++F KG ++++K+VGE+ER ++ +F +A+
Sbjct: 664 VLLYGPPGCSKTMIAKALA---NESG--LNFLAIKGPELMNKYVGESERAVREIFRKARA 718
Query: 476 NQPSIIFFDEIDGLAPVR--SSKQEQIHNSIVSTLLALMDGLDSRGQVVLIGATNRVDAI 533
PSIIFFDE+D LA R SS + + +++ LL MDG++ V ++ ATNR D I
Sbjct: 719 VAPSIIFFDELDALAVERGSSSGAGNVADRVLAQLLTEMDGIEQLKNVTVLAATNRPDRI 778
Query: 534 DGALRRPGRFDREFNFPLPGCEARAEILDIHTRKWKQPPSRELK-SELAASCVGYCGADL 592
D AL RPGR DR PLP R EIL++ P S E+ EL Y GA++
Sbjct: 779 DKALMRPGRIDRIIYVPLPDAATRREILNLQFHS--MPISNEVDLDELVLQTDTYSGAEI 836
Query: 593 KALCTEAAIRAFRE 606
A+C EAA+ A E
Sbjct: 837 IAVCKEAALLALEE 850
Score = 365 (133.5 bits), Expect = 7.6e-30, P = 7.6e-30
Identities = 106/341 (31%), Positives = 167/341 (48%)
Query: 437 ASKAGQKVSFYMRKGADVLSKWVGEAERQLKLLFEEAQRNQPSIIFFDEIDGLAPVRSSK 496
A++ G VS G +++SK+ GE E +L+ +F EA PSIIF DE+D L P R
Sbjct: 408 ANEVGAYVSVI--NGPEIISKFYGETEARLRQIFAEATLRHPSIIFIDELDALCPKREGA 465
Query: 497 QEQIHNSIVSTLLALMDGLDSRG---QVVLIGATNRVDAIDGALRRPGRFDREFNFPLPG 553
Q ++ +V++LL LMDG+ S G +V+++GATNR A+D ALRRPGRFD+E +P
Sbjct: 466 QSEVEKRVVASLLTLMDGIGSEGSEGRVLVLGATNRPQALDAALRRPGRFDKEIEIGIPN 525
Query: 554 CEARAEILDIHTRKWKQPPSRELKSELAASCVGYCGADLKALCTEAAIRAFREKYPQVYT 613
+ R +IL R+ ++ LA + GY GADLKALC EA + A R +
Sbjct: 526 AQDRLDILQKLLRRVPHLLTKAELLRLANNAHGYVGADLKALCNEAGLHALRRVLRKQPN 585
Query: 614 SDDKFLIDVDSVTVEKYHFIEAMSTITPAAHRGATVHSRPLSLVVAPCLQRHLQKAMNYI 673
D + + +T+ F++ M+ I P+A R + +S L+ K +
Sbjct: 586 LPDSKVAGMVKITLND--FLQGMNDIRPSAMREVAIDVPNVSWSDIGGLENIKLKLKQAV 643
Query: 674 SDIFPPLGMSSELTKLCMLSHGSAIPLVYRPRLLLCGSEGTGVDHLGPAILHELEKFPVH 733
PL ++ G P +LL G G + A+ +E
Sbjct: 644 EW---PLKHPKSFNRM-----GIQPP----KGVLLYGPPGCSKTMIAKALANE-SGLNFL 690
Query: 734 SLGLPALLSDPSAKTPEEALVHIFGEARRTTPSILYIPQFN 774
++ P L++ ++ E A+ IF +AR PSI++ + +
Sbjct: 691 AIKGPELMNKYVGES-ERAVREIFRKARAVAPSIIFFDELD 730
Score = 304 (112.1 bits), Expect = 3.2e-23, P = 3.2e-23
Identities = 79/208 (37%), Positives = 116/208 (55%)
Query: 437 ASKAGQKVSFYMRKGADVLSKWVGEAERQLKLLFEEAQRNQPSIIFFDEIDGLAPVR--S 494
A+++G ++F KG ++++K+VGE+ER ++ +F +A+ PSIIFFDE+D LA R S
Sbjct: 682 ANESG--LNFLAIKGPELMNKYVGESERAVREIFRKARAVAPSIIFFDELDALAVERGSS 739
Query: 495 SKQEQIHNSIVSTLLALMDGLDSRGQVVLIGATNRVDAIDGALRRPGRFDREFNFPLPGC 554
S + + +++ LL MDG++ V ++ ATNR D ID AL RPGR DR PLP
Sbjct: 740 SGAGNVADRVLAQLLTEMDGIEQLKNVTVLAATNRPDRIDKALMRPGRIDRIIYVPLPDA 799
Query: 555 EARAEILDIHTRKWKQPPSRELK-SELAASCVGYCGADLKALCTEAAIRAFREKYPQVYT 613
R EIL++ P S E+ EL Y GA++ A+C EAA+ A E
Sbjct: 800 ATRREILNLQFHS--MPISNEVDLDELVLQTDTYSGAEIIAVCKEAALLALEEN------ 851
Query: 614 SDDKFLIDVDSVTVEKYHFIEAMSTITP 641
I D + K HF +A+S +TP
Sbjct: 852 ------IKADCIM--KRHFTQALSIVTP 871
>UNIPROTKB|H7C475 [details] [associations]
symbol:ATAD2B "ATPase family AAA domain-containing protein
2B" species:9606 "Homo sapiens" [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
Pfam:PF00004 SMART:SM00382 GO:GO:0005524 GO:GO:0017111
EMBL:AC009242 EMBL:AC066692 EMBL:AC079924 HGNC:HGNC:29230
ProteinModelPortal:H7C475 Ensembl:ENST00000366438 Uniprot:H7C475
Length = 155
Score = 500 (181.1 bits), Expect = 5.2e-47, P = 5.2e-47
Identities = 94/138 (68%), Positives = 114/138 (82%)
Query: 365 ADIQPLQVDESVSFDDIGGLSEYIDALKEMVFFPLLYPDFFASYHITPPRGVLLCGPPGT 424
AD+ P+ +D+SV FD IGGLS +I ALKEMV FPLLYP+ F + I PPRG L GPPGT
Sbjct: 8 ADVDPMNIDKSVRFDSIGGLSHHIHALKEMVVFPLLYPEIFEKFKIQPPRGCLFYGPPGT 67
Query: 425 GKTLIARALACAASKAGQKVSFYMRKGADVLSKWVGEAERQLKLLFEEAQRNQPSIIFFD 484
GKTL+ARALA S+ +KV+F+MRKGAD LSKWVGE+ERQL+LLF++A +PSIIFFD
Sbjct: 68 GKTLVARALANECSQGDKKVAFFMRKGADCLSKWVGESERQLRLLFDQAYLMRPSIIFFD 127
Query: 485 EIDGLAPVRSSKQEQIHN 502
EIDGLAPVRSS+Q+QIH+
Sbjct: 128 EIDGLAPVRSSRQDQIHS 145
>UNIPROTKB|Q8NB90 [details] [associations]
symbol:SPATA5 "Spermatogenesis-associated protein 5"
species:9606 "Homo sapiens" [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0007275 "multicellular organismal development" evidence=IEA]
[GO:0007283 "spermatogenesis" evidence=IEA] [GO:0030154 "cell
differentiation" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 InterPro:IPR003338
GO:GO:0007275 GO:GO:0005739 GO:GO:0005524 GO:GO:0005737
GO:GO:0030154 GO:GO:0007283 HSSP:Q01853 eggNOG:COG0464
HOGENOM:HOG000223225 KO:K14575 GO:GO:0017111 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 SMART:SM01073 EMBL:AC021205
EMBL:AF361489 EMBL:AF479656 EMBL:AK091384 EMBL:AC026402
EMBL:AC097492 EMBL:AC109357 EMBL:BC048217 IPI:IPI00329583
IPI:IPI00890715 IPI:IPI00890727 RefSeq:NP_660208.2
UniGene:Hs.709648 ProteinModelPortal:Q8NB90 SMR:Q8NB90
IntAct:Q8NB90 STRING:Q8NB90 PhosphoSite:Q8NB90 DMDM:308153554
PaxDb:Q8NB90 PRIDE:Q8NB90 DNASU:166378 Ensembl:ENST00000274008
GeneID:166378 KEGG:hsa:166378 UCSC:uc003iey.3 UCSC:uc003iez.4
CTD:166378 GeneCards:GC04P123844 H-InvDB:HIX0022056 HGNC:HGNC:18119
HPA:HPA036451 MIM:613940 neXtProt:NX_Q8NB90 PharmGKB:PA38294
HOVERGEN:HBG108504 InParanoid:Q8NB90 OMA:NDIRPSA OrthoDB:EOG43FGWF
PhylomeDB:Q8NB90 GenomeRNAi:166378 NextBio:88589 Bgee:Q8NB90
CleanEx:HS_SPATA5 Genevestigator:Q8NB90 Uniprot:Q8NB90
Length = 893
Score = 527 (190.6 bits), Expect = 6.3e-47, Sum P(2) = 6.3e-47
Identities = 118/273 (43%), Positives = 166/273 (60%)
Query: 376 VSFDDIGGLSEYIDALKEMVFFPLLYPDFFASYHITPPRGVLLCGPPGTGKTLIARALAC 435
V++D IGGLS + A++E++ PL P+ F SY I PRGVLL GPPGTGKT+IARA+A
Sbjct: 350 VTYDMIGGLSSQLKAIREIIELPLKQPELFKSYGIPAPRGVLLYGPPGTGKTMIARAVA- 408
Query: 436 AASKAGQKVSFYMRKGADVLSKWVGEAERQLKLLFEEAQRNQPSIIFFDEIDGLAPVRSS 495
++ G VS G +++SK+ GE E +L+ +F EA PSIIF DE+D L P R
Sbjct: 409 --NEVGAYVSVI--NGPEIISKFYGETEAKLRQIFAEATLRHPSIIFIDELDALCPKREG 464
Query: 496 KQEQIHNSIVSTLLALMDGLDSR---GQVVLIGATNRVDAIDGALRRPGRFDREFNFPLP 552
Q ++ +V++LL LMDG+ S GQV+++GATNR A+D ALRRPGRFD+E +P
Sbjct: 465 AQNEVEKRVVASLLTLMDGIGSEVSEGQVLVLGATNRPHALDAALRRPGRFDKEIEIGVP 524
Query: 553 GCEARAEILDIHTRKWKQPPSRELKSELAASCVGYCGADLKALCTEAAIRAFREKYPQVY 612
+ R +IL R+ + +LA S GY GADLK LC EA + A R +
Sbjct: 525 NAQDRLDILQKLLRRVPHLLTEAELLQLANSAHGYVGADLKVLCNEAGLCALRRILKKQP 584
Query: 613 TSDDKFLIDVDSVTVEKYHFIEAMSTITPAAHR 645
D + + +T++ F++AM+ I P+A R
Sbjct: 585 NLPDVKVAGLVKITLKD--FLQAMNDIRPSAMR 615
Score = 419 (152.6 bits), Expect = 1.4e-34, Sum P(2) = 1.4e-34
Identities = 99/244 (40%), Positives = 144/244 (59%)
Query: 367 IQPLQVD-ESVSFDDIGGLSEYIDALKEMVFFPLLYPDFFASYHITPPRGVLLCGPPGTG 425
++ + +D +VS+ DIGGL L++ V +PL +P+ F I PP+GVLL GPPG
Sbjct: 614 MREIAIDVPNVSWSDIGGLESIKLKLEQAVEWPLKHPESFIRMGIQPPKGVLLYGPPGCS 673
Query: 426 KTLIARALACAASKAGQKVSFYMRKGADVLSKWVGEAERQLKLLFEEAQRNQPSIIFFDE 485
KT+IA+ALA +++G ++F KG ++++K+VGE+ER ++ F +A+ PSIIFFDE
Sbjct: 674 KTMIAKALA---NESG--LNFLAIKGPELMNKYVGESERAVRETFRKARAVAPSIIFFDE 728
Query: 486 IDGLAPVRSSK--QEQIHNSIVSTLLALMDGLDSRGQVVLIGATNRVDAIDGALRRPGRF 543
+D LA R S + + +++ LL MDG++ V ++ ATNR D ID AL RPGR
Sbjct: 729 LDALAVERGSSLGAGNVADRVLAQLLTEMDGIEQLKDVTILAATNRPDRIDKALMRPGRI 788
Query: 544 DREFNFPLPGCEARAEILDIHTRKWKQPPSRELK-SELAASCVGYCGADLKALCTEAAIR 602
DR PLP R EI + P S E+ EL Y GA++ A+C EAA+
Sbjct: 789 DRIIYVPLPDAATRREIFKLQFHS--MPVSNEVDLDELILQTDAYSGAEIVAVCREAALL 846
Query: 603 AFRE 606
A E
Sbjct: 847 ALEE 850
Score = 357 (130.7 bits), Expect = 1.1e-27, Sum P(2) = 1.1e-27
Identities = 107/341 (31%), Positives = 167/341 (48%)
Query: 437 ASKAGQKVSFYMRKGADVLSKWVGEAERQLKLLFEEAQRNQPSIIFFDEIDGLAPVRSSK 496
A++ G VS G +++SK+ GE E +L+ +F EA PSIIF DE+D L P R
Sbjct: 408 ANEVGAYVSVI--NGPEIISKFYGETEAKLRQIFAEATLRHPSIIFIDELDALCPKREGA 465
Query: 497 QEQIHNSIVSTLLALMDGLDSR---GQVVLIGATNRVDAIDGALRRPGRFDREFNFPLPG 553
Q ++ +V++LL LMDG+ S GQV+++GATNR A+D ALRRPGRFD+E +P
Sbjct: 466 QNEVEKRVVASLLTLMDGIGSEVSEGQVLVLGATNRPHALDAALRRPGRFDKEIEIGVPN 525
Query: 554 CEARAEILDIHTRKWKQPPSRELKSELAASCVGYCGADLKALCTEAAIRAFREKYPQVYT 613
+ R +IL R+ + +LA S GY GADLK LC EA + A R +
Sbjct: 526 AQDRLDILQKLLRRVPHLLTEAELLQLANSAHGYVGADLKVLCNEAGLCALRRILKKQPN 585
Query: 614 SDDKFLIDVDSVTVEKYHFIEAMSTITPAAHRGATVHSRPLSLVVAPCLQRHLQKAMNYI 673
D + + +T++ F++AM+ I P+A R + +S L+ K +
Sbjct: 586 LPDVKVAGLVKITLKD--FLQAMNDIRPSAMREIAIDVPNVSWSDIGGLESIKLKLEQAV 643
Query: 674 SDIFPPLGMSSELTKLCMLSHGSAIPLVYRPRLLLCGSEGTGVDHLGPAILHELEKFPVH 733
PL ++ G P +LL G G + A+ +E
Sbjct: 644 EW---PLKHPESFIRM-----GIQPP----KGVLLYGPPGCSKTMIAKALANE-SGLNFL 690
Query: 734 SLGLPALLSDPSAKTPEEALVHIFGEARRTTPSILYIPQFN 774
++ P L++ ++ E A+ F +AR PSI++ + +
Sbjct: 691 AIKGPELMNKYVGES-ERAVRETFRKARAVAPSIIFFDELD 730
Score = 307 (113.1 bits), Expect = 3.3e-22, Sum P(2) = 3.3e-22
Identities = 77/208 (37%), Positives = 114/208 (54%)
Query: 437 ASKAGQKVSFYMRKGADVLSKWVGEAERQLKLLFEEAQRNQPSIIFFDEIDGLAPVRSSK 496
A+++G ++F KG ++++K+VGE+ER ++ F +A+ PSIIFFDE+D LA R S
Sbjct: 682 ANESG--LNFLAIKGPELMNKYVGESERAVRETFRKARAVAPSIIFFDELDALAVERGSS 739
Query: 497 --QEQIHNSIVSTLLALMDGLDSRGQVVLIGATNRVDAIDGALRRPGRFDREFNFPLPGC 554
+ + +++ LL MDG++ V ++ ATNR D ID AL RPGR DR PLP
Sbjct: 740 LGAGNVADRVLAQLLTEMDGIEQLKDVTILAATNRPDRIDKALMRPGRIDRIIYVPLPDA 799
Query: 555 EARAEILDIHTRKWKQPPSRELK-SELAASCVGYCGADLKALCTEAAIRAFREKYPQVYT 613
R EI + P S E+ EL Y GA++ A+C EAA+ A E
Sbjct: 800 ATRREIFKLQFHS--MPVSNEVDLDELILQTDAYSGAEIVAVCREAALLALEE------- 850
Query: 614 SDDKFLIDVDSVTVEKYHFIEAMSTITP 641
D+ + + K HF +A+ST+TP
Sbjct: 851 -------DIQANLIMKRHFTQALSTVTP 871
Score = 38 (18.4 bits), Expect = 6.3e-47, Sum P(2) = 6.3e-47
Identities = 9/27 (33%), Positives = 12/27 (44%)
Query: 244 SVEEGKQRPRSPRRVLHQGIGTKVGRD 270
S EG ++ R+L IG K D
Sbjct: 295 SAREGNEQLTEEERLLKFSIGAKCNTD 321
>RGD|1310478 [details] [associations]
symbol:Spata5 "spermatogenesis associated 5" species:10116
"Rattus norvegicus" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA;ISO] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 InterPro:IPR003338
RGD:1310478 GO:GO:0005524 GO:GO:0005737 KO:K14575
GeneTree:ENSGT00700000104502 GO:GO:0017111 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 EMBL:CH473961 SMART:SM01073
CTD:166378 OrthoDB:EOG43FGWF EMBL:AC116183 IPI:IPI00373191
RefSeq:NP_001102019.1 UniGene:Rn.116828 Ensembl:ENSRNOT00000023584
GeneID:361935 KEGG:rno:361935 UCSC:RGD:1310478 NextBio:678104
Uniprot:D4A6T1
Length = 838
Score = 519 (187.8 bits), Expect = 2.8e-46, Sum P(2) = 2.8e-46
Identities = 114/277 (41%), Positives = 166/277 (59%)
Query: 376 VSFDDIGGLSEYIDALKEMVFFPLLYPDFFASYHITPPRGVLLCGPPGTGKTLIARALAC 435
V++D IGGL+ + A++E++ PL P+ F SY I PRG+LL GPPGTGKT+IARA+A
Sbjct: 350 VTYDMIGGLNSQLKAIREIIELPLKQPELFKSYGIPAPRGLLLYGPPGTGKTMIARAVA- 408
Query: 436 AASKAGQKVSFYMRKGADVLSKWVGEAERQLKLLFEEAQRNQPSIIFFDEIDGLAPVRSS 495
++ G VS G +++SK+ GE E +L+ +F EA PSIIF DE+D L P R
Sbjct: 409 --NEVGAYVSVI--NGPEIISKFYGETEARLRQIFAEATLRHPSIIFIDELDALCPKREG 464
Query: 496 KQEQIHNSIVSTLLALMDGLDSRG---QVVLIGATNRVDAIDGALRRPGRFDREFNFPLP 552
Q ++ +V++LL LMDG+ S G +V+++GATNR A+D ALRRPGRFD+E +P
Sbjct: 465 AQSEVEKRVVASLLTLMDGIGSEGSEGRVLVLGATNRPQALDAALRRPGRFDKEIEIGIP 524
Query: 553 GCEARAEILDIHTRKWKQPPSRELKSELAASCVGYCGADLKALCTEAAIRAFREKYPQVY 612
+ R +IL R+ ++ LA + GY GADLKALC EA + A R +
Sbjct: 525 NAQDRLDILQKLLRRVPHLLTKAELLRLANNAHGYVGADLKALCNEAGLYALRRVLRKQP 584
Query: 613 TSDDKFLIDVDSVTVEKYHFIEAMSTITPAAHRGATV 649
D + + +T+ F++ M+ I P+A R +
Sbjct: 585 NLPDSKVAGMVKITLND--FLQGMNDIRPSAMREVAI 619
Score = 363 (132.8 bits), Expect = 1.8e-28, Sum P(2) = 1.8e-28
Identities = 105/341 (30%), Positives = 168/341 (49%)
Query: 437 ASKAGQKVSFYMRKGADVLSKWVGEAERQLKLLFEEAQRNQPSIIFFDEIDGLAPVRSSK 496
A++ G VS G +++SK+ GE E +L+ +F EA PSIIF DE+D L P R
Sbjct: 408 ANEVGAYVSVI--NGPEIISKFYGETEARLRQIFAEATLRHPSIIFIDELDALCPKREGA 465
Query: 497 QEQIHNSIVSTLLALMDGLDSRG---QVVLIGATNRVDAIDGALRRPGRFDREFNFPLPG 553
Q ++ +V++LL LMDG+ S G +V+++GATNR A+D ALRRPGRFD+E +P
Sbjct: 466 QSEVEKRVVASLLTLMDGIGSEGSEGRVLVLGATNRPQALDAALRRPGRFDKEIEIGIPN 525
Query: 554 CEARAEILDIHTRKWKQPPSRELKSELAASCVGYCGADLKALCTEAAIRAFREKYPQVYT 613
+ R +IL R+ ++ LA + GY GADLKALC EA + A R +
Sbjct: 526 AQDRLDILQKLLRRVPHLLTKAELLRLANNAHGYVGADLKALCNEAGLYALRRVLRKQPN 585
Query: 614 SDDKFLIDVDSVTVEKYHFIEAMSTITPAAHRGATVHSRPLSLVVAPCLQRHLQKAMNYI 673
D + + +T+ F++ M+ I P+A R + +S L+ K +
Sbjct: 586 LPDSKVAGMVKITLND--FLQGMNDIRPSAMREVAIDVPNVSWSDIGGLENIKLKLKQAV 643
Query: 674 SDIFPPLGMSSELTKLCMLSHGSAIPLVYRPRLLLCGSEGTGVDHLGPAILHELEKFPVH 733
PL +++ G P +LL G G + A+ +E
Sbjct: 644 EW---PLKHPKSFSRM-----GIQPP----KGVLLYGPPGCSKTMIAKALANE-SGLNFL 690
Query: 734 SLGLPALLSDPSAKTPEEALVHIFGEARRTTPSILYIPQFN 774
++ P L++ ++ E A+ +F +AR PSI++ + +
Sbjct: 691 AIKGPELMNKYVGES-ERAVREVFRKARAVAPSIIFFDELD 730
Score = 315 (115.9 bits), Expect = 6.5e-24, Sum P(2) = 6.5e-24
Identities = 76/181 (41%), Positives = 114/181 (62%)
Query: 362 KGGADIQPLQVDE------SVSFDDIGGLSEYIDALKEMVFFPLLYPDFFASYHITPPRG 415
+G DI+P + E +VS+ DIGGL LK+ V +PL +P F+ I PP+G
Sbjct: 604 QGMNDIRPSAMREVAIDVPNVSWSDIGGLENIKLKLKQAVEWPLKHPKSFSRMGIQPPKG 663
Query: 416 VLLCGPPGTGKTLIARALACAASKAGQKVSFYMRKGADVLSKWVGEAERQLKLLFEEAQR 475
VLL GPPG KT+IA+ALA +++G ++F KG ++++K+VGE+ER ++ +F +A+
Sbjct: 664 VLLYGPPGCSKTMIAKALA---NESG--LNFLAIKGPELMNKYVGESERAVREVFRKARA 718
Query: 476 NQPSIIFFDEIDGLAPVR--SSKQEQIHNSIVSTLLALMDGLDSRGQVVLIGATNRVDAI 533
PSIIFFDE+D LA R SS + + +++ LL MDG++ V ++ ATNR D I
Sbjct: 719 VAPSIIFFDELDALAVERGSSSGAGNVADRVLAQLLTEMDGIEQLKNVTVLAATNRPDRI 778
Query: 534 D 534
D
Sbjct: 779 D 779
Score = 45 (20.9 bits), Expect = 6.5e-24, Sum P(2) = 6.5e-24
Identities = 16/48 (33%), Positives = 22/48 (45%)
Query: 594 ALCTEAAIRAFREKYPQVYTSDDKFLIDVDSVTVEKYHFIEAMSTITP 641
A+C EAA+ A E I D + K HF +A+S +TP
Sbjct: 783 AVCKEAALLALEEN------------IKADCIM--KRHFTQALSIVTP 816
Score = 38 (18.4 bits), Expect = 2.8e-46, Sum P(2) = 2.8e-46
Identities = 15/46 (32%), Positives = 20/46 (43%)
Query: 351 TSGIQTAGPSSKGGADIQPLQVDESV--SFD-DIGGLSEYIDALKE 393
T G P S G D+ + ++S S D DI +D LKE
Sbjct: 197 TDGTTLGKPQSSSGTDVHGMASEQSSMESSDVDISFQLSQLD-LKE 241
>UNIPROTKB|Q58576 [details] [associations]
symbol:pan "Proteasome-activating nucleotidase"
species:243232 "Methanocaldococcus jannaschii DSM 2661" [GO:0003924
"GTPase activity" evidence=IDA] [GO:0006184 "GTP catabolic process"
evidence=IDA] [GO:0006200 "ATP catabolic process" evidence=IDA]
[GO:0010498 "proteasomal protein catabolic process" evidence=IDA]
[GO:0016887 "ATPase activity" evidence=IDA] [GO:0022623
"proteasome-activating nucleotidase complex" evidence=IDA]
[GO:0043273 "CTPase activity" evidence=IDA] [GO:0043335 "protein
unfolding" evidence=IDA] HAMAP:MF_00553 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005737 GO:GO:0003924 GO:GO:0016887 GO:GO:0010498
GO:GO:0022623 GO:GO:0043335 GO:GO:0043273 EMBL:L77117
GenomeReviews:L77117_GR PIR:G64446 RefSeq:NP_248170.1 PDB:3H43
PDB:3H4M PDB:3IPM PDBsum:3H43 PDBsum:3H4M PDBsum:3IPM
ProteinModelPortal:Q58576 SMR:Q58576 PRIDE:Q58576 GeneID:1452074
KEGG:mja:MJ_1176 eggNOG:COG1222 KO:K03420 OMA:RVNERKA
ProtClustDB:PRK03992 EvolutionaryTrace:Q58576 InterPro:IPR023501
TIGRFAMs:TIGR01242 Uniprot:Q58576
Length = 430
Score = 486 (176.1 bits), Expect = 1.7e-45, P = 1.7e-45
Identities = 112/266 (42%), Positives = 161/266 (60%)
Query: 370 LQVDE--SVSFDDIGGLSEYIDALKEMVFFPLLYPDFFASYHITPPRGVLLCGPPGTGKT 427
++VDE +V ++DIGGL + + ++E+V PL +P+ F I PP+G+LL GPPGTGKT
Sbjct: 159 MEVDERPNVRYEDIGGLEKQMQEIREVVELPLKHPELFEKVGIEPPKGILLYGPPGTGKT 218
Query: 428 LIARALACAASKAGQKVSFYMRKGADVLSKWVGEAERQLKLLFEEAQRNQPSIIFFDEID 487
L+A+A+A + +F G++++ K++GE +K +F+ A+ PSIIF DEID
Sbjct: 219 LLAKAVATETN-----ATFIRVVGSELVKKFIGEGASLVKDIFKLAKEKAPSIIFIDEID 273
Query: 488 GLAPVRSSK----QEQIHNSIVSTLLALMDGLDSRGQVVLIGATNRVDAIDGALRRPGRF 543
+A R+ ++ +++ LLA MDG D+RG V +IGATNR D +D A+ RPGRF
Sbjct: 274 AIAAKRTDALTGGDREVQRTLMQ-LLAEMDGFDARGDVKIIGATNRPDILDPAILRPGRF 332
Query: 544 DREFNFPLPGCEARAEILDIHTRKWKQPPSRELKSELAASCVGYCGADLKALCTEAAIRA 603
DR P P + R EIL IHTRK L+ E+A G GA+LKA+CTEA + A
Sbjct: 333 DRIIEVPAPDEKGRLEILKIHTRKMNLAEDVNLE-EIAKMTEGCVGAELKAICTEAGMNA 391
Query: 604 FREKYPQVYTSDDKFLIDVDSVTVEK 629
RE V T DD F V+ + +K
Sbjct: 392 IRELRDYV-TMDD-FRKAVEKIMEKK 415
>CGD|CAL0002187 [details] [associations]
symbol:orf19.6432 species:5476 "Candida albicans" [GO:0005829
"cytosol" evidence=IEA] [GO:0030687 "preribosome, large subunit
precursor" evidence=IEA] [GO:0042493 "response to drug"
evidence=IEA] [GO:0042273 "ribosomal large subunit biogenesis"
evidence=IEA] [GO:0016887 "ATPase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 InterPro:IPR003338
CGD:CAL0002187 GO:GO:0005524 EMBL:AACQ01000073 EMBL:AACQ01000072
eggNOG:COG0464 KO:K14575 GO:GO:0017111 InterPro:IPR009010
SUPFAM:SSF50692 SMART:SM01073 RefSeq:XP_716187.1 RefSeq:XP_716270.1
ProteinModelPortal:Q5A331 GeneID:3642106 GeneID:3642160
KEGG:cal:CaO19.13790 KEGG:cal:CaO19.6432 Uniprot:Q5A331
Length = 766
Score = 498 (180.4 bits), Expect = 2.3e-45, Sum P(2) = 2.3e-45
Identities = 114/276 (41%), Positives = 164/276 (59%)
Query: 374 ESVSFDDIGGLSEYIDALKEMVFFPLLYPDFFASYHITPPRGVLLCGPPGTGKTLIARAL 433
+ +++D +GGLS+ I+ LK + PL P F+ + I+PPRG+LL GPPGTGKT++ R +
Sbjct: 224 QQITYDQVGGLSKQIELLKSTIELPLNNPTLFSDFGISPPRGILLHGPPGTGKTMLLRCV 283
Query: 434 ACAASKAGQKVSFYMRKGADVLSKWVGEAERQLKLLFEEAQRNQPSIIFFDEIDGLAPVR 493
A + ++A G ++SK++GE E ++ +F EA++ QPSIIF DEID +AP R
Sbjct: 284 ANSITEA----HVLTINGPSIVSKYLGETENAIRDIFNEAKKFQPSIIFMDEIDSIAPSR 339
Query: 494 SSKQE-QIHNSIVSTLLALMDGLDSRGQVVLIGATNRVDAIDGALRRPGRFDREFNFPLP 552
+S + + +V+ LL +MDG+ G++V+IGATNR ++ID ALRRPGRFD+E +P
Sbjct: 340 TSDDSGETESRVVAQLLTVMDGMGDNGRIVVIGATNRPNSIDSALRRPGRFDQEVEIGIP 399
Query: 553 GCEARAEILDIHTRKWKQPPSRELKSELA--ASCV-GYCGADLKALCTEAAIRAFREKYP 609
EAR EIL K + K E+A AS GY GADL ALC E+ ++A
Sbjct: 400 DVEAREEILTKQFAKMNSEKCQITKEEIASIASKTHGYVGADLTALCRESVMKAINRGLT 459
Query: 610 QVYTSDDKFLIDVDSVTVEKYHFIEAMSTITPAAHR 645
V + VD V YH A+ I P+A R
Sbjct: 460 -VGIPQTAIKVTVDDV----YH---ALPEIRPSAMR 487
Score = 372 (136.0 bits), Expect = 8.8e-31, P = 8.8e-31
Identities = 93/234 (39%), Positives = 134/234 (57%)
Query: 376 VSFDDIGGLSEYIDALKEMVFFPLLYPDFFASYHITPPRGVLLCGPPGTGKTLIARALAC 435
V + DIGG E L E+V PL D F + ++ P+GVLL GPPG KTL A+ALA
Sbjct: 496 VHWSDIGGQEELKRKLIEVVQLPLEASDSFKNLGVSSPKGVLLYGPPGCSKTLTAKALA- 554
Query: 436 AASKAGQKVSFYMRKGADVLSKWVGEAERQLKLLFEEAQRNQPSIIFFDEIDGLAPVRSS 495
+++G ++F KG ++ +K+VGE+ER ++ +F +A+ PSIIFFDEID +A R
Sbjct: 555 --TESG--LNFLAVKGPEIFNKYVGESERAIREIFRKARAASPSIIFFDEIDAIAGDRDG 610
Query: 496 KQEQIHNS-IVSTLLALMDGLDSRGQVVLIGATNRVDAIDGALRRPGRFDREFNFPLPGC 554
S ++++LL +DG++ VV++GATN+ ID AL RPGR DR P
Sbjct: 611 DSSTTAASNVLTSLLNEIDGVEELKGVVIVGATNKPTEIDPALLRPGRLDRHIYVAPPDY 670
Query: 555 EARAEILDIHTRKWKQPPSRELKS--ELAASCVGYCGADLKALCTEAAIRAFRE 606
+AR +IL +RK+ E +LA G GA++ LC EA + A E
Sbjct: 671 DARLQILQKCSRKFNLQSGDESVDLQKLAELTDGCSGAEVTLLCQEAGLAAIME 724
Score = 48 (22.0 bits), Expect = 2.3e-45, Sum P(2) = 2.3e-45
Identities = 9/25 (36%), Positives = 16/25 (64%)
Query: 750 EEALVHIFGEARRTTPSILYIPQFN 774
E A+ IF +AR +PSI++ + +
Sbjct: 578 ERAIREIFRKARAASPSIIFFDEID 602
>GENEDB_PFALCIPARUM|PF07_0047 [details] [associations]
symbol:PF07_0047 "cell division cycle ATPase,
putative" species:5833 "Plasmodium falciparum" [GO:0016887 "ATPase
activity" evidence=ISS] [GO:0051726 "regulation of cell cycle"
evidence=ISS] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 InterPro:IPR003338 Pfam:PF02359 GO:GO:0005524
GO:GO:0016887 GO:GO:0007049 GO:GO:0051726 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 PANTHER:PTHR23077:SF18
SMART:SM01073 EMBL:AL844506 EMBL:M96757 RefSeq:XP_001349023.1
ProteinModelPortal:P46468 IntAct:P46468 MINT:MINT-1593477
PRIDE:P46468 EnsemblProtists:PF07_0047:mRNA GeneID:2655095
KEGG:pfa:PF07_0047 EuPathDB:PlasmoDB:PF3D7_0711000 Uniprot:P46468
Length = 1229
Score = 497 (180.0 bits), Expect = 1.5e-44, Sum P(3) = 1.5e-44
Identities = 102/257 (39%), Positives = 162/257 (63%)
Query: 373 DESVSFDDIGGLSEYIDALKEMVFFPLLYPDFFASYHITPPRGVLLCGPPGTGKTLIARA 432
++ ++++D+GG+ + ++ ++E++ PL YP+ F S I+ P+GVL+ G PGTGKT IA+A
Sbjct: 521 NDDITYEDLGGMKKQLNKIRELIELPLKYPEIFMSIGISAPKGVLMHGIPGTGKTSIAKA 580
Query: 433 LACAASKAGQKVSFYMRKGADVLSKWVGEAERQLKLLFEEAQRNQPSIIFFDEIDGLAPV 492
+A ++ Y+ G +++SK +GE+E++L+ +F++A P IIF DEID +A
Sbjct: 581 IANESN-----AYCYIINGPEIMSKHIGESEQKLRKIFKKASEKTPCIIFIDEIDSIANK 635
Query: 493 RSSKQEQIHNSIVSTLLALMDGLDSRGQVVLIGATNRVDAIDGALRRPGRFDREFNFPLP 552
RS ++ +VS LL LMDGL V+++ ATNR ++ID ALRR GRFDRE P+P
Sbjct: 636 RSKSNNELEKRVVSQLLTLMDGLKKNNNVLVLAATNRPNSIDPALRRFGRFDREIEIPVP 695
Query: 553 GCEARAEILDIHTRKWKQPPSRELKSELAASCVGYCGADLKALCTEAAIRAFREKYPQVY 612
+ R EIL T+K K P L+ ++A C GY GADL LC EAAI+ +E +
Sbjct: 696 DEQGRYEILLTKTKKMKLDPDVNLR-KIAKECHGYVGADLAQLCFEAAIQCIKE-HIHFL 753
Query: 613 TSDDKFLIDVDSVTVEK 629
D++ I+ ++V++
Sbjct: 754 DLDEEDFIEFMKISVDE 770
Score = 381 (139.2 bits), Expect = 1.6e-30, Sum P(2) = 1.6e-30
Identities = 83/234 (35%), Positives = 135/234 (57%)
Query: 375 SVSFDDIGGLSEYIDALKEMVFFPLLYPDFFASYHITPPRGVLLCGPPGTGKTLIARALA 434
+V+++DIGG++E + LKE + +PL Y + ++ +G+LL GPPG GKTL+A+A+A
Sbjct: 930 TVTWNDIGGMNEVKEQLKETILYPLEYKHLYNKFNSNYNKGILLYGPPGCGKTLLAKAIA 989
Query: 435 CAASKAGQKVSFYMRKGADVLSKWVGEAERQLKLLFEEAQRNQPSIIFFDEIDGLAPVRS 494
K +F KG ++L+ W GE+E ++ LF++A+ P IIFFDEID LA R+
Sbjct: 990 NEC-----KANFISVKGPELLTMWFGESEANVRDLFDKARAASPCIIFFDEIDSLAKERN 1044
Query: 495 SK-QEQIHNSIVSTLLALMDGLDSRGQVVLIGATNRVDAIDGALRRPGRFDREFNFPLPG 553
S + +++ +L +DG++ + + +I ATNR D +D AL RPGR D+ LP
Sbjct: 1045 SNTNNDASDRVINQILTEIDGINEKKTIFIIAATNRPDILDKALTRPGRLDKLIYISLPD 1104
Query: 554 CEARAEILDIHTRKWKQPPSRELK-SELAASCVGYCGADLKALCTEAAIRAFRE 606
++R I + P + ++ ++A G+ GAD+ LC A A +E
Sbjct: 1105 LKSRYSIFKAILKN--TPLNEDVDIHDMAKRTEGFSGADITNLCQSAVNEAIKE 1156
Score = 56 (24.8 bits), Expect = 1.5e-44, Sum P(3) = 1.5e-44
Identities = 20/73 (27%), Positives = 35/73 (47%)
Query: 702 YRPRLLLCGSEGTGVDHLGPAILHELEKFPVHSLGLPALLSDPSAKTPEEALVHIFGEAR 761
Y +LL G G G L AI +E + + G P LL+ ++ E + +F +AR
Sbjct: 967 YNKGILLYGPPGCGKTLLAKAIANECKANFISVKG-PELLTMWFGES-EANVRDLFDKAR 1024
Query: 762 RTTPSILYIPQFN 774
+P I++ + +
Sbjct: 1025 AASPCIIFFDEID 1037
Score = 45 (20.9 bits), Expect = 1.5e-44, Sum P(3) = 1.5e-44
Identities = 20/71 (28%), Positives = 28/71 (39%)
Query: 119 RNNMSQDELSPSKRKK--VVEAKPTPRREGLRPRRSMVATRKQLN-LDSGDEQGSSEEKV 175
+N+ S D LS K VE KP G + T+K L +D E+ EK+
Sbjct: 128 KNDQSNDTLSTYKNNNEMTVEGKPNNLASGEGKKEIHNTTQKILEKVDYFKER----EKI 183
Query: 176 GQDETENGNES 186
N N +
Sbjct: 184 TNSYNNNNNNN 194
Score = 41 (19.5 bits), Expect = 3.9e-44, Sum P(3) = 3.9e-44
Identities = 7/38 (18%), Positives = 18/38 (47%)
Query: 158 KQLNLDSGDEQGSSEEKVGQDETENGNESDNDADDGQN 195
K + + D ++ ++ N N ++N+ + G+N
Sbjct: 272 KSYSPNDHDNNSNNSNNNNNNDNNNSNNNNNNNNGGKN 309
>UNIPROTKB|P46468 [details] [associations]
symbol:PF07_0047 "Putative cell division cycle ATPase"
species:36329 "Plasmodium falciparum 3D7" [GO:0006200 "ATP
catabolic process" evidence=ISS] [GO:0016887 "ATPase activity"
evidence=ISS] [GO:0051726 "regulation of cell cycle" evidence=ISS]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 Pfam:PF02359 GO:GO:0005524 GO:GO:0016887
GO:GO:0007049 GO:GO:0051726 Gene3D:2.40.40.20 InterPro:IPR009010
SUPFAM:SSF50692 PANTHER:PTHR23077:SF18 SMART:SM01073 EMBL:AL844506
EMBL:M96757 RefSeq:XP_001349023.1 ProteinModelPortal:P46468
IntAct:P46468 MINT:MINT-1593477 PRIDE:P46468
EnsemblProtists:PF07_0047:mRNA GeneID:2655095 KEGG:pfa:PF07_0047
EuPathDB:PlasmoDB:PF3D7_0711000 Uniprot:P46468
Length = 1229
Score = 497 (180.0 bits), Expect = 1.5e-44, Sum P(3) = 1.5e-44
Identities = 102/257 (39%), Positives = 162/257 (63%)
Query: 373 DESVSFDDIGGLSEYIDALKEMVFFPLLYPDFFASYHITPPRGVLLCGPPGTGKTLIARA 432
++ ++++D+GG+ + ++ ++E++ PL YP+ F S I+ P+GVL+ G PGTGKT IA+A
Sbjct: 521 NDDITYEDLGGMKKQLNKIRELIELPLKYPEIFMSIGISAPKGVLMHGIPGTGKTSIAKA 580
Query: 433 LACAASKAGQKVSFYMRKGADVLSKWVGEAERQLKLLFEEAQRNQPSIIFFDEIDGLAPV 492
+A ++ Y+ G +++SK +GE+E++L+ +F++A P IIF DEID +A
Sbjct: 581 IANESN-----AYCYIINGPEIMSKHIGESEQKLRKIFKKASEKTPCIIFIDEIDSIANK 635
Query: 493 RSSKQEQIHNSIVSTLLALMDGLDSRGQVVLIGATNRVDAIDGALRRPGRFDREFNFPLP 552
RS ++ +VS LL LMDGL V+++ ATNR ++ID ALRR GRFDRE P+P
Sbjct: 636 RSKSNNELEKRVVSQLLTLMDGLKKNNNVLVLAATNRPNSIDPALRRFGRFDREIEIPVP 695
Query: 553 GCEARAEILDIHTRKWKQPPSRELKSELAASCVGYCGADLKALCTEAAIRAFREKYPQVY 612
+ R EIL T+K K P L+ ++A C GY GADL LC EAAI+ +E +
Sbjct: 696 DEQGRYEILLTKTKKMKLDPDVNLR-KIAKECHGYVGADLAQLCFEAAIQCIKE-HIHFL 753
Query: 613 TSDDKFLIDVDSVTVEK 629
D++ I+ ++V++
Sbjct: 754 DLDEEDFIEFMKISVDE 770
Score = 381 (139.2 bits), Expect = 1.6e-30, Sum P(2) = 1.6e-30
Identities = 83/234 (35%), Positives = 135/234 (57%)
Query: 375 SVSFDDIGGLSEYIDALKEMVFFPLLYPDFFASYHITPPRGVLLCGPPGTGKTLIARALA 434
+V+++DIGG++E + LKE + +PL Y + ++ +G+LL GPPG GKTL+A+A+A
Sbjct: 930 TVTWNDIGGMNEVKEQLKETILYPLEYKHLYNKFNSNYNKGILLYGPPGCGKTLLAKAIA 989
Query: 435 CAASKAGQKVSFYMRKGADVLSKWVGEAERQLKLLFEEAQRNQPSIIFFDEIDGLAPVRS 494
K +F KG ++L+ W GE+E ++ LF++A+ P IIFFDEID LA R+
Sbjct: 990 NEC-----KANFISVKGPELLTMWFGESEANVRDLFDKARAASPCIIFFDEIDSLAKERN 1044
Query: 495 SK-QEQIHNSIVSTLLALMDGLDSRGQVVLIGATNRVDAIDGALRRPGRFDREFNFPLPG 553
S + +++ +L +DG++ + + +I ATNR D +D AL RPGR D+ LP
Sbjct: 1045 SNTNNDASDRVINQILTEIDGINEKKTIFIIAATNRPDILDKALTRPGRLDKLIYISLPD 1104
Query: 554 CEARAEILDIHTRKWKQPPSRELK-SELAASCVGYCGADLKALCTEAAIRAFRE 606
++R I + P + ++ ++A G+ GAD+ LC A A +E
Sbjct: 1105 LKSRYSIFKAILKN--TPLNEDVDIHDMAKRTEGFSGADITNLCQSAVNEAIKE 1156
Score = 56 (24.8 bits), Expect = 1.5e-44, Sum P(3) = 1.5e-44
Identities = 20/73 (27%), Positives = 35/73 (47%)
Query: 702 YRPRLLLCGSEGTGVDHLGPAILHELEKFPVHSLGLPALLSDPSAKTPEEALVHIFGEAR 761
Y +LL G G G L AI +E + + G P LL+ ++ E + +F +AR
Sbjct: 967 YNKGILLYGPPGCGKTLLAKAIANECKANFISVKG-PELLTMWFGES-EANVRDLFDKAR 1024
Query: 762 RTTPSILYIPQFN 774
+P I++ + +
Sbjct: 1025 AASPCIIFFDEID 1037
Score = 45 (20.9 bits), Expect = 1.5e-44, Sum P(3) = 1.5e-44
Identities = 20/71 (28%), Positives = 28/71 (39%)
Query: 119 RNNMSQDELSPSKRKK--VVEAKPTPRREGLRPRRSMVATRKQLN-LDSGDEQGSSEEKV 175
+N+ S D LS K VE KP G + T+K L +D E+ EK+
Sbjct: 128 KNDQSNDTLSTYKNNNEMTVEGKPNNLASGEGKKEIHNTTQKILEKVDYFKER----EKI 183
Query: 176 GQDETENGNES 186
N N +
Sbjct: 184 TNSYNNNNNNN 194
Score = 41 (19.5 bits), Expect = 3.9e-44, Sum P(3) = 3.9e-44
Identities = 7/38 (18%), Positives = 18/38 (47%)
Query: 158 KQLNLDSGDEQGSSEEKVGQDETENGNESDNDADDGQN 195
K + + D ++ ++ N N ++N+ + G+N
Sbjct: 272 KSYSPNDHDNNSNNSNNNNNNDNNNSNNNNNNNNGGKN 309
>GENEDB_PFALCIPARUM|PF10_0081 [details] [associations]
symbol:PF10_0081 "26S proteasome regulatory
subunit 4, putative" species:5833 "Plasmodium falciparum"
[GO:0004175 "endopeptidase activity" evidence=ISS] [GO:0005838
"proteasome regulatory particle" evidence=ISS] [GO:0006508
"proteolysis" evidence=ISS] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 GO:GO:0006508
GO:GO:0004175 GO:GO:0030163 GO:GO:0017111 EMBL:AE014185
TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 KO:K03062
ProtClustDB:PTZ00361 GO:GO:0005838 RefSeq:XP_001347366.2
ProteinModelPortal:Q8IJW0 IntAct:Q8IJW0 MINT:MINT-1726172
PRIDE:Q8IJW0 EnsemblProtists:PF10_0081:mRNA GeneID:810239
KEGG:pfa:PF10_0081 EuPathDB:PlasmoDB:PF3D7_1008400 Uniprot:Q8IJW0
Length = 448
Score = 450 (163.5 bits), Expect = 5.7e-44, Sum P(2) = 5.7e-44
Identities = 97/243 (39%), Positives = 146/243 (60%)
Query: 377 SFDDIGGLSEYIDALKEMVFFPLLYPDFFASYHITPPRGVLLCGPPGTGKTLIARALACA 436
S+ DIGGL I +KE V PL +P+ + I PP+GV+L GPPGTGKTL+A+A+A
Sbjct: 191 SYADIGGLESQIQEIKEAVELPLTHPELYEDIGIKPPKGVILYGPPGTGKTLLAKAVANE 250
Query: 437 ASKAGQKVSFYMRKGADVLSKWVGEAERQLKLLFEEAQRNQPSIIFFDEIDGLAPVR--- 493
S +F G++++ K++G+ + ++ +F+ A+ + PSI+F DEID + R
Sbjct: 251 TS-----ATFLRVVGSELIQKYLGDGPKLVREMFKVAEEHAPSIVFIDEIDAVGTKRYEA 305
Query: 494 -SSKQEQIHNSIVSTLLALMDGLDSRGQVVLIGATNRVDAIDGALRRPGRFDREFNFPLP 552
S + +I +++ LL +DG DSRG V +I ATNR+D++D AL RPGR DR+ P P
Sbjct: 306 TSGGEREIQRTMLE-LLNQLDGFDSRGDVKVIMATNRIDSLDPALIRPGRIDRKIQLPNP 364
Query: 553 GCEARAEILDIHTRKWKQPPSRELKSELAASCVGYCGADLKALCTEAAIRAFREKYPQVY 612
+ + I IHT K P +L+ E S GAD+KA+CTEA + A RE+ ++
Sbjct: 365 DTKTKRRIFQIHTSKMTMSPDVDLE-EFVMSKDELSGADIKAICTEAGLLALRERRMKIT 423
Query: 613 TSD 615
+D
Sbjct: 424 QAD 426
Score = 48 (22.0 bits), Expect = 5.7e-44, Sum P(2) = 5.7e-44
Identities = 17/55 (30%), Positives = 23/55 (41%)
Query: 89 SVNLEDYTDSSGSEDEDLMRPSYRPLRNRMRNNMSQ---DELSPSKRKKVVEAKP 140
SV E Y + D+DL+ P L N N++ DE+ P VE P
Sbjct: 134 SVGPEYYVNILSFVDKDLLEPGCSVLLNNKTNSVVGILLDEVDPLVSVMKVEKAP 188
>UNIPROTKB|Q8IJW0 [details] [associations]
symbol:PF10_0081 "26S proteasome regulatory subunit 4,
putative" species:36329 "Plasmodium falciparum 3D7" [GO:0004175
"endopeptidase activity" evidence=ISS] [GO:0005838 "proteasome
regulatory particle" evidence=ISS] [GO:0006508 "proteolysis"
evidence=ISS] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 GO:GO:0006508
GO:GO:0004175 GO:GO:0030163 GO:GO:0017111 EMBL:AE014185
TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 KO:K03062
ProtClustDB:PTZ00361 GO:GO:0005838 RefSeq:XP_001347366.2
ProteinModelPortal:Q8IJW0 IntAct:Q8IJW0 MINT:MINT-1726172
PRIDE:Q8IJW0 EnsemblProtists:PF10_0081:mRNA GeneID:810239
KEGG:pfa:PF10_0081 EuPathDB:PlasmoDB:PF3D7_1008400 Uniprot:Q8IJW0
Length = 448
Score = 450 (163.5 bits), Expect = 5.7e-44, Sum P(2) = 5.7e-44
Identities = 97/243 (39%), Positives = 146/243 (60%)
Query: 377 SFDDIGGLSEYIDALKEMVFFPLLYPDFFASYHITPPRGVLLCGPPGTGKTLIARALACA 436
S+ DIGGL I +KE V PL +P+ + I PP+GV+L GPPGTGKTL+A+A+A
Sbjct: 191 SYADIGGLESQIQEIKEAVELPLTHPELYEDIGIKPPKGVILYGPPGTGKTLLAKAVANE 250
Query: 437 ASKAGQKVSFYMRKGADVLSKWVGEAERQLKLLFEEAQRNQPSIIFFDEIDGLAPVR--- 493
S +F G++++ K++G+ + ++ +F+ A+ + PSI+F DEID + R
Sbjct: 251 TS-----ATFLRVVGSELIQKYLGDGPKLVREMFKVAEEHAPSIVFIDEIDAVGTKRYEA 305
Query: 494 -SSKQEQIHNSIVSTLLALMDGLDSRGQVVLIGATNRVDAIDGALRRPGRFDREFNFPLP 552
S + +I +++ LL +DG DSRG V +I ATNR+D++D AL RPGR DR+ P P
Sbjct: 306 TSGGEREIQRTMLE-LLNQLDGFDSRGDVKVIMATNRIDSLDPALIRPGRIDRKIQLPNP 364
Query: 553 GCEARAEILDIHTRKWKQPPSRELKSELAASCVGYCGADLKALCTEAAIRAFREKYPQVY 612
+ + I IHT K P +L+ E S GAD+KA+CTEA + A RE+ ++
Sbjct: 365 DTKTKRRIFQIHTSKMTMSPDVDLE-EFVMSKDELSGADIKAICTEAGLLALRERRMKIT 423
Query: 613 TSD 615
+D
Sbjct: 424 QAD 426
Score = 48 (22.0 bits), Expect = 5.7e-44, Sum P(2) = 5.7e-44
Identities = 17/55 (30%), Positives = 23/55 (41%)
Query: 89 SVNLEDYTDSSGSEDEDLMRPSYRPLRNRMRNNMSQ---DELSPSKRKKVVEAKP 140
SV E Y + D+DL+ P L N N++ DE+ P VE P
Sbjct: 134 SVGPEYYVNILSFVDKDLLEPGCSVLLNNKTNSVVGILLDEVDPLVSVMKVEKAP 188
>FB|FBgn0015282 [details] [associations]
symbol:Rpt2 "Regulatory particle triple-A ATPase 2"
species:7227 "Drosophila melanogaster" [GO:0006508 "proteolysis"
evidence=ISS;IDA;NAS] [GO:0000502 "proteasome complex"
evidence=NAS] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=NAS] [GO:0016887 "ATPase activity" evidence=NAS]
[GO:0008540 "proteasome regulatory particle, base subcomplex"
evidence=ISS] [GO:0004175 "endopeptidase activity" evidence=IDA]
[GO:0005838 "proteasome regulatory particle" evidence=ISS;IDA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0030163 "protein catabolic process" evidence=IEA]
[GO:0009987 "cellular process" evidence=IMP] [GO:0007052 "mitotic
spindle organization" evidence=IMP] [GO:0000022 "mitotic spindle
elongation" evidence=IMP] [GO:0008283 "cell proliferation"
evidence=IMP] [GO:0006974 "response to DNA damage stimulus"
evidence=IMP] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 EMBL:AE014297 GO:GO:0005524 GO:GO:0005634
GO:GO:0005737 GO:GO:0008283 GO:GO:0006508 GO:GO:0006974
GO:GO:0016887 GO:GO:0004175 GO:GO:0030163 GO:GO:0000022
eggNOG:COG1222 TIGRFAMs:TIGR01242 GO:GO:0008540 KO:K03062
OMA:FIRNQER GeneTree:ENSGT00550000074818 EMBL:U39303 EMBL:AY058759
RefSeq:NP_524469.2 UniGene:Dm.2368 ProteinModelPortal:P48601
SMR:P48601 DIP:DIP-17276N IntAct:P48601 MINT:MINT-817128
STRING:P48601 PaxDb:P48601 PRIDE:P48601 EnsemblMetazoa:FBtr0084520
GeneID:42828 KEGG:dme:Dmel_CG5289 CTD:42828 FlyBase:FBgn0015282
InParanoid:P48601 OrthoDB:EOG4R4XJ3 PhylomeDB:P48601
BRENDA:3.4.25.1 ChiTaRS:Pros26.4 GenomeRNAi:42828 NextBio:830777
Bgee:P48601 GermOnline:CG5289 Uniprot:P48601
Length = 439
Score = 451 (163.8 bits), Expect = 7.2e-44, Sum P(2) = 7.2e-44
Identities = 104/266 (39%), Positives = 152/266 (57%)
Query: 367 IQPLQVDESVSFDDIGGLSEYIDALKEMVFFPLLYPDFFASYHITPPRGVLLCGPPGTGK 426
+ L+ ++ DIGGL I +KE V PL +P+++ I PP+GV+L GPPGTGK
Sbjct: 172 VMKLEKAPQETYADIGGLDTQIQEIKESVELPLTHPEYYEEMGIKPPKGVILYGPPGTGK 231
Query: 427 TLIARALACAASKAGQKVSFYMRKGADVLSKWVGEAERQLKLLFEEAQRNQPSIIFFDEI 486
TL+A+A+A S +F G++++ K++G+ + ++ LF A+ + PSI+F DEI
Sbjct: 232 TLLAKAVANQTS-----ATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEI 286
Query: 487 DGLAPVRSSKQEQIHNSIVSTLLALM---DGLDSRGQVVLIGATNRVDAIDGALRRPGRF 543
D + R I T+L L+ DG DSRG V +I ATNR++ +D AL RPGR
Sbjct: 287 DAVGTKRYDSNSGGEREIQRTMLELLNQLDGFDSRGDVKVIMATNRIETLDPALIRPGRI 346
Query: 544 DREFNFPLPGCEARAEILDIHTRKWKQPPSRELKSELAASCVGYCGADLKALCTEAAIRA 603
DR+ FPLP + + I IHT + L SEL + GAD+KA+CTEA + A
Sbjct: 347 DRKIEFPLPDEKTKRRIFTIHTSRMTLAEDVNL-SELIMAKDDLSGADIKAICTEAGLMA 405
Query: 604 FREKYPQVYTSDDKFLIDVDSVTVEK 629
RE+ +V T++D F +SV K
Sbjct: 406 LRERRMKV-TNED-FKKSKESVLYRK 429
Score = 46 (21.3 bits), Expect = 7.2e-44, Sum P(2) = 7.2e-44
Identities = 27/104 (25%), Positives = 39/104 (37%)
Query: 43 RKSKTKARTAASQIARMFGPGKRTVRTSNKNSVPLNLRRSTRKRRISVNLEDYTDSSGSE 102
+ K K + I G KR + + + TR R + LE D E
Sbjct: 15 KDDKDKKKKYEPPIPTRVGKKKRRAKGPDAAMKLPQVTPHTRCRLKLLKLERIKDYLMME 74
Query: 103 DEDLMRPSYRPLRNRMRNNMSQDELSPSKRKKVVEAKPTPRREG 146
DE + RN+ R QDE + +R KV + + TP G
Sbjct: 75 DEFI--------RNQERLK-PQDEKNEEERSKVDDLRGTPMSVG 109
Score = 38 (18.4 bits), Expect = 5.0e-43, Sum P(2) = 5.0e-43
Identities = 10/27 (37%), Positives = 12/27 (44%)
Query: 126 ELSPSKRKKVVEAKPTPRREGLRPRRS 152
E K KK P P R G + RR+
Sbjct: 13 EKKDDKDKKKKYEPPIPTRVGKKKRRA 39
>DICTYBASE|DDB_G0276917 [details] [associations]
symbol:psmC2 "26S proteasome ATPase 2 subunit"
species:44689 "Dictyostelium discoideum" [GO:0045335 "phagocytic
vesicle" evidence=IDA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=ISS]
[GO:0006200 "ATP catabolic process" evidence=ISS] [GO:0000502
"proteasome complex" evidence=IEA;ISS] [GO:0005634 "nucleus"
evidence=IEA] [GO:0044351 "macropinocytosis" evidence=RCA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
dictyBase:DDB_G0276917 GO:GO:0005524 GO:GO:0005634 GO:GO:0045335
GenomeReviews:CM000151_GR GO:GO:0016887 GO:GO:0000502 GO:GO:0006511
HSSP:Q9WZ49 EMBL:AAFI02000019 eggNOG:COG1222 TIGRFAMs:TIGR01242
KO:K03061 RefSeq:XP_642830.1 ProteinModelPortal:Q86JA1
STRING:Q86JA1 PRIDE:Q86JA1 EnsemblProtists:DDB0232966
GeneID:8620693 KEGG:ddi:DDB_G0276917 OMA:HIFTIHA
ProtClustDB:CLSZ2429177 Uniprot:Q86JA1
Length = 428
Score = 468 (169.8 bits), Expect = 1.5e-43, P = 1.5e-43
Identities = 110/279 (39%), Positives = 162/279 (58%)
Query: 365 ADIQPLQVDES--VSFDDIGGLSEYIDALKEMVFFPLLYPDFFASYHITPPRGVLLCGPP 422
A + +QV+E +++ D+GG E I+ L+E+V PLL+P+ F + I PP+GVL+ GPP
Sbjct: 154 ASVTMMQVEEKPDITYKDVGGCKEQIEKLREVVEMPLLHPEKFVNLGIDPPKGVLMYGPP 213
Query: 423 GTGKTLIARALACAASKAGQKVSFYMRKGADVLSKWVGEAERQLKLLFEEAQRNQPSIIF 482
GTGKTL ARA+A A +V G++++ K+VGE R ++ LF+ A+ + IIF
Sbjct: 214 GTGKTLCARAVANRTDAAFVRVI-----GSELVQKYVGEGARMVRDLFQMARSKKACIIF 268
Query: 483 FDEIDGLAPVRSSKQEQIHNSIVSTLLAL---MDGLDSRGQVVLIGATNRVDAIDGALRR 539
FDE+D + R N + T+L L +DG D RG + ++ ATNR D +D AL R
Sbjct: 269 FDEVDAIGGARFDDGAGGDNEVQRTMLELINQLDGFDPRGNIKVLMATNRPDTLDPALLR 328
Query: 540 PGRFDREFNFPLPGCEARAEILDIHTRKWKQPPSRELKSELAAS-CVGYCGADLKALCTE 598
PGR DR+ F LP E RA I IH + +R+++ EL A C GAD++++CTE
Sbjct: 329 PGRLDRKVEFGLPDLEGRAHIFTIHAKTMSC--ARDIRFELLARLCPNSTGADIRSVCTE 386
Query: 599 AAIRAFREKYPQVYTSDDKFLIDVDSVTVEKYHFIEAMS 637
A + A R + V S+ FL +D V ++ Y A S
Sbjct: 387 AGMFAIRARRKVV--SEKDFLEAIDKV-IKSYAKFSATS 422
>UNIPROTKB|Q5R8D7 [details] [associations]
symbol:PSMC2 "26S protease regulatory subunit 7"
species:9601 "Pongo abelii" [GO:0000502 "proteasome complex"
evidence=ISS] [GO:0000932 "cytoplasmic mRNA processing body"
evidence=ISS] [GO:0006200 "ATP catabolic process" evidence=ISS]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=ISS] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0022624 "proteasome accessory complex" evidence=ISS]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0016887 GO:GO:0006511 HSSP:Q01853
GO:GO:0000932 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 GO:GO:0022624
KO:K03061 CTD:5701 EMBL:CR859816 RefSeq:NP_001126144.1
UniGene:Pab.13078 ProteinModelPortal:Q5R8D7 PRIDE:Q5R8D7
GeneID:100173102 KEGG:pon:100173102 InParanoid:Q5R8D7
Uniprot:Q5R8D7
Length = 433
Score = 461 (167.3 bits), Expect = 8.7e-43, P = 8.7e-43
Identities = 109/267 (40%), Positives = 157/267 (58%)
Query: 370 LQVDES--VSFDDIGGLSEYIDALKEMVFFPLLYPDFFASYHITPPRGVLLCGPPGTGKT 427
+QV+E V++ D+GG E I+ L+E+V PLL+P+ F + I PP+GVLL GPPGTGKT
Sbjct: 164 MQVEEKPDVTYSDVGGCKEQIEKLREVVETPLLHPERFVNLGIEPPKGVLLFGPPGTGKT 223
Query: 428 LIARALACAASKAGQKVSFYMRKGADVLSKWVGEAERQLKLLFEEAQRNQPSIIFFDEID 487
L ARA+A +V G++++ K+VGE R ++ LFE A+ + +IFFDEID
Sbjct: 224 LCARAVANRTDACFIRVI-----GSELVQKYVGEGARMVRELFEMARTKKACLIFFDEID 278
Query: 488 GLAPVRSSKQEQIHNSIVSTLLAL---MDGLDSRGQVVLIGATNRVDAIDGALRRPGRFD 544
+ R N + T+L L +DG D RG + ++ ATNR D +D AL RPGR D
Sbjct: 279 AIGGARFDDGAGGDNEVQRTMLELINQLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLD 338
Query: 545 REFNFPLPGCEARAEILDIHTRKWKQPPSRELKSELAAS-CVGYCGADLKALCTEAAIRA 603
R+ F LP E R IL IH R R+++ EL A C GA+++++CTEA + A
Sbjct: 339 RKIEFSLPDLEGRTHILKIHARSMSV--ERDIRFELLARLCPNSTGAEIRSVCTEAGMFA 396
Query: 604 FREKYPQVYTSDDKFLIDVDSVTVEKY 630
R + ++ T D FL V+ V ++ Y
Sbjct: 397 IRARR-KIATEKD-FLEAVNKV-IKSY 420
>SGD|S000004389 [details] [associations]
symbol:AFG2 "ATPase of the CDC48/PAS1/SEC18 (AAA) family,
forms a hexameric complex" species:4932 "Saccharomyces cerevisiae"
[GO:0030687 "preribosome, large subunit precursor"
evidence=IDA;IMP] [GO:0042493 "response to drug" evidence=IMP]
[GO:0005622 "intracellular" evidence=IDA] [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0016887 "ATPase activity" evidence=IDA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0042273 "ribosomal
large subunit biogenesis" evidence=IMP] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 SGD:S000004389 GO:GO:0005524 GO:GO:0042493
EMBL:BK006945 GO:GO:0016887 eggNOG:COG0464 HOGENOM:HOG000223225
KO:K14575 OrthoDB:EOG49CTH0 GO:GO:0042273 EMBL:L14615 EMBL:U19729
EMBL:AY693116 PIR:S39110 RefSeq:NP_013501.1
ProteinModelPortal:P32794 SMR:P32794 DIP:DIP-4470N IntAct:P32794
MINT:MINT-566202 STRING:P32794 PaxDb:P32794 PeptideAtlas:P32794
EnsemblFungi:YLR397C GeneID:851113 KEGG:sce:YLR397C CYGD:YLR397c
GeneTree:ENSGT00700000104502 OMA:MLLRCVA NextBio:967827
Genevestigator:P32794 GermOnline:YLR397C GO:GO:0030687
Uniprot:P32794
Length = 780
Score = 478 (173.3 bits), Expect = 1.0e-42, Sum P(2) = 1.0e-42
Identities = 112/279 (40%), Positives = 171/279 (61%)
Query: 374 ESVSFDDIGGLSEYIDALKEMVFFPLLYPDFFASYHITPPRGVLLCGPPGTGKTLIARAL 433
E +S+ +GGL + I++LK + PL P F+S+ ++PPRG+LL GPPGTGKT++ R +
Sbjct: 240 EPLSYAAVGGLDKEIESLKSAIEIPLHQPTLFSSFGVSPPRGILLHGPPGTGKTMLLRVV 299
Query: 434 ACAASKAGQKVSFYMRKGADVLSKWVGEAERQLKLLFEEAQRNQPSIIFFDEIDGLAPVR 493
A ++ ++ G ++SK++GE E L+ +F EA++ QPSIIF DEID +AP R
Sbjct: 300 ANTSNAHVLTIN-----GPSIVSKYLGETEAALRDIFNEARKYQPSIIFIDEIDSIAPNR 354
Query: 494 SSKQE-QIHNSIVSTLLALMDGLDSRGQVVLIGATNRVDAIDGALRRPGRFDREFNFPLP 552
++ ++ + +V+TLL LMDG+ + G+VV+I ATNR +++D ALRRPGRFD+E +P
Sbjct: 355 ANDDSGEVESRVVATLLTLMDGMGAAGKVVVIAATNRPNSVDPALRRPGRFDQEVEIGIP 414
Query: 553 GCEARAEILDIHTRKWKQPPSRE--LKSE----LAASCVGYCGADLKALCTEAAIRAFRE 606
+AR +IL T+++ + S L SE +A+ GY GADL ALC E+ ++ +
Sbjct: 415 DVDARFDIL---TKQFSRMSSDRHVLDSEAIKYIASKTHGYVGADLTALCRESVMKTIQR 471
Query: 607 KYPQVYTSDDKFLIDVDSVTVEKYHFIEAMSTITPAAHR 645
+ DKF + V VE AM I P+A R
Sbjct: 472 GLG-TDANIDKFSLKVTLKDVES-----AMVDIRPSAMR 504
Score = 429 (156.1 bits), Expect = 4.9e-37, P = 4.9e-37
Identities = 99/231 (42%), Positives = 136/231 (58%)
Query: 376 VSFDDIGGLSEYIDALKEMVFFPLLYPDFFASYHITPPRGVLLCGPPGTGKTLIARALAC 435
V + DIGG E +KEM+ PL + FA I+ P+GVLL GPPG KTL A+ALA
Sbjct: 513 VYWSDIGGQEELKTKMKEMIQLPLEASETFARLGISAPKGVLLYGPPGCSKTLTAKALA- 571
Query: 436 AASKAGQKVSFYMRKGADVLSKWVGEAERQLKLLFEEAQRNQPSIIFFDEIDGLAPVRSS 495
+++G ++F KG ++ +K+VGE+ER ++ +F +A+ PSIIFFDEID L+P R
Sbjct: 572 --TESG--INFLAVKGPEIFNKYVGESERAIREIFRKARSAAPSIIFFDEIDALSPDRDG 627
Query: 496 KQEQIHNSIVSTLLALMDGLDSRGQVVLIGATNRVDAIDGALRRPGRFDREFNFPLPGCE 555
N ++++LL +DG++ VV++ ATNR D ID AL RPGR DR P
Sbjct: 628 SSTSAANHVLTSLLNEIDGVEELKGVVIVAATNRPDEIDAALLRPGRLDRHIYVGPPDVN 687
Query: 556 ARAEILDIHTRKWKQPPSRELKSELAASCVGYCGADLKALCTEAAIRAFRE 606
AR EIL T+K+ S ELA GY GA++ LC EA + A E
Sbjct: 688 ARLEILKKCTKKFNTEESGVDLHELADRTEGYSGAEVVLLCQEAGLAAIME 738
Score = 47 (21.6 bits), Expect = 1.0e-42, Sum P(2) = 1.0e-42
Identities = 9/25 (36%), Positives = 15/25 (60%)
Query: 750 EEALVHIFGEARRTTPSILYIPQFN 774
E A+ IF +AR PSI++ + +
Sbjct: 595 ERAIREIFRKARSAAPSIIFFDEID 619
>UNIPROTKB|F1NSP7 [details] [associations]
symbol:PSMC1 "26S protease regulatory subunit 4"
species:9031 "Gallus gallus" [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0022624 "proteasome accessory complex" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 TIGRFAMs:TIGR01242 OMA:FIRNQER
GeneTree:ENSGT00550000074818 IPI:IPI00585304 EMBL:AADN02003628
EMBL:AADN02003629 Ensembl:ENSGALT00000017367 ArrayExpress:F1NSP7
Uniprot:F1NSP7
Length = 439
Score = 446 (162.1 bits), Expect = 1.4e-42, Sum P(2) = 1.4e-42
Identities = 98/244 (40%), Positives = 141/244 (57%)
Query: 377 SFDDIGGLSEYIDALKEMVFFPLLYPDFFASYHITPPRGVLLCGPPGTGKTLIARALACA 436
++ DIGGL I +KE V PL +P+++ I PP+GV+L GPPGTGKTL+A+A+A
Sbjct: 182 TYADIGGLDNQIQEIKESVELPLTHPEYYEEMGIKPPKGVILYGPPGTGKTLLAKAVANQ 241
Query: 437 ASKAGQKVSFYMRKGADVLSKWVGEAERQLKLLFEEAQRNQPSIIFFDEIDGLAPVRSSK 496
S +F G++++ K++G+ + ++ LF A+ + PSI+F DEID + R
Sbjct: 242 TS-----ATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAIGTKRYDS 296
Query: 497 QEQIHNSIVSTLLALM---DGLDSRGQVVLIGATNRVDAIDGALRRPGRFDREFNFPLPG 553
I T+L L+ DG DSRG V +I ATNR++ +D AL RPGR DR+ FPLP
Sbjct: 297 NSGGEREIQRTMLELLNQLDGFDSRGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPD 356
Query: 554 CEARAEILDIHTRKWKQPPSRELKSELAASCVGYCGADLKALCTEAAIRAFREKYPQVYT 613
+ + I IHT + L EL + GAD+KA+CTEA + A RE+ +V
Sbjct: 357 EKTKKRIFQIHTSRMTLADDVTL-DELIMAKDDLSGADIKAICTEAGLMALRERRMKVTN 415
Query: 614 SDDK 617
D K
Sbjct: 416 EDFK 419
Score = 39 (18.8 bits), Expect = 1.4e-42, Sum P(2) = 1.4e-42
Identities = 15/55 (27%), Positives = 20/55 (36%)
Query: 89 SVNLEDYTDSSGSEDEDLMRPSYRPLRNRMRN---NMSQDELSPSKRKKVVEAKP 140
SV E Y D+DL+ P L N + + D+ P VE P
Sbjct: 125 SVGSEHYVSILSFVDKDLLEPGCSVLLNHKVHAVIGVLMDDTDPLVTVMKVEKAP 179
>UNIPROTKB|F1NTZ4 [details] [associations]
symbol:PSMC1 "26S protease regulatory subunit 4"
species:9031 "Gallus gallus" [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0022624 "proteasome accessory complex" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 TIGRFAMs:TIGR01242 OMA:FIRNQER
GeneTree:ENSGT00550000074818 EMBL:AADN02003628 EMBL:AADN02003629
IPI:IPI00821206 Ensembl:ENSGALT00000037629 ArrayExpress:F1NTZ4
Uniprot:F1NTZ4
Length = 438
Score = 446 (162.1 bits), Expect = 1.4e-42, Sum P(2) = 1.4e-42
Identities = 98/244 (40%), Positives = 141/244 (57%)
Query: 377 SFDDIGGLSEYIDALKEMVFFPLLYPDFFASYHITPPRGVLLCGPPGTGKTLIARALACA 436
++ DIGGL I +KE V PL +P+++ I PP+GV+L GPPGTGKTL+A+A+A
Sbjct: 181 TYADIGGLDNQIQEIKESVELPLTHPEYYEEMGIKPPKGVILYGPPGTGKTLLAKAVANQ 240
Query: 437 ASKAGQKVSFYMRKGADVLSKWVGEAERQLKLLFEEAQRNQPSIIFFDEIDGLAPVRSSK 496
S +F G++++ K++G+ + ++ LF A+ + PSI+F DEID + R
Sbjct: 241 TS-----ATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAIGTKRYDS 295
Query: 497 QEQIHNSIVSTLLALM---DGLDSRGQVVLIGATNRVDAIDGALRRPGRFDREFNFPLPG 553
I T+L L+ DG DSRG V +I ATNR++ +D AL RPGR DR+ FPLP
Sbjct: 296 NSGGEREIQRTMLELLNQLDGFDSRGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPD 355
Query: 554 CEARAEILDIHTRKWKQPPSRELKSELAASCVGYCGADLKALCTEAAIRAFREKYPQVYT 613
+ + I IHT + L EL + GAD+KA+CTEA + A RE+ +V
Sbjct: 356 EKTKKRIFQIHTSRMTLADDVTL-DELIMAKDDLSGADIKAICTEAGLMALRERRMKVTN 414
Query: 614 SDDK 617
D K
Sbjct: 415 EDFK 418
Score = 39 (18.8 bits), Expect = 1.4e-42, Sum P(2) = 1.4e-42
Identities = 15/55 (27%), Positives = 20/55 (36%)
Query: 89 SVNLEDYTDSSGSEDEDLMRPSYRPLRNRMRN---NMSQDELSPSKRKKVVEAKP 140
SV E Y D+DL+ P L N + + D+ P VE P
Sbjct: 124 SVGSEHYVSILSFVDKDLLEPGCSVLLNHKVHAVIGVLMDDTDPLVTVMKVEKAP 178
>UNIPROTKB|Q90732 [details] [associations]
symbol:PSMC1 "26S protease regulatory subunit 4"
species:9031 "Gallus gallus" [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0022624 "proteasome accessory complex" evidence=ISS]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 eggNOG:COG1222 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109
GO:GO:0022624 HOGENOM:HOG000225143 KO:K03062 EMBL:U60187
IPI:IPI00585304 PIR:S74197 RefSeq:NP_990289.1 UniGene:Gga.1071
ProteinModelPortal:Q90732 STRING:Q90732 PRIDE:Q90732 GeneID:395804
KEGG:gga:395804 CTD:5700 InParanoid:Q90732 OrthoDB:EOG4D7Z5Q
NextBio:20815872 Uniprot:Q90732
Length = 440
Score = 446 (162.1 bits), Expect = 1.7e-42, Sum P(2) = 1.7e-42
Identities = 99/254 (38%), Positives = 144/254 (56%)
Query: 367 IQPLQVDESVSFDDIGGLSEYIDALKEMVFFPLLYPDFFASYHITPPRGVLLCGPPGTGK 426
+ L+ ++ DIGGL I +KE V PL +P+++ I PP+GV+L GPPGTGK
Sbjct: 173 VMKLEKAPQETYADIGGLDNQIQEIKESVELPLTHPEYYEEMGIKPPKGVILYGPPGTGK 232
Query: 427 TLIARALACAASKAGQKVSFYMRKGADVLSKWVGEAERQLKLLFEEAQRNQPSIIFFDEI 486
TL+A+A+A S +F G++++ K++G+ + ++ LF A+ + PSI+F DEI
Sbjct: 233 TLLAKAVANQTS-----ATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHGPSIVFIDEI 287
Query: 487 DGLAPVRSSKQEQIHNSIVSTLLALM---DGLDSRGQVVLIGATNRVDAIDGALRRPGRF 543
D + R I T+L L+ DG DSRG V +I ATNR++ +D AL RPGR
Sbjct: 288 DAIGTKRYDSNSGGEREIQRTMLELLNQLDGFDSRGDVKVIMATNRIETLDPALIRPGRI 347
Query: 544 DREFNFPLPGCEARAEILDIHTRKWKQPPSRELKSELAASCVGYCGADLKALCTEAAIRA 603
DR+ FPLP + + I IHT + L EL + GAD+KA+CTEA + A
Sbjct: 348 DRKIEFPLPDEKTKKRIFQIHTSRMTLADDVTL-DELIMAKDDLSGADIKAICTEAGLMA 406
Query: 604 FREKYPQVYTSDDK 617
RE+ +V D K
Sbjct: 407 LRERRMKVTNEDFK 420
Score = 38 (18.4 bits), Expect = 1.7e-42, Sum P(2) = 1.7e-42
Identities = 10/28 (35%), Positives = 12/28 (42%)
Query: 89 SVNLEDYTDSSGSEDEDLMRPSYRPLRN 116
SV E Y D+DL+ P L N
Sbjct: 126 SVGSEHYVSILSFVDKDLLEPGCSVLLN 153
>UNIPROTKB|P46472 [details] [associations]
symbol:psmc2 "26S protease regulatory subunit 7"
species:8355 "Xenopus laevis" [GO:0000502 "proteasome complex"
evidence=ISS] [GO:0006200 "ATP catabolic process" evidence=ISS]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=ISS] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0022624 "proteasome accessory complex" evidence=ISS]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0016887
GO:GO:0006511 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 GO:GO:0022624
KO:K03061 CTD:5701 EMBL:X80157 EMBL:BC054143 PIR:S53709
RefSeq:NP_001084136.1 UniGene:Xl.57157 ProteinModelPortal:P46472
GeneID:399327 KEGG:xla:399327 Xenbase:XB-GENE-1000023
Uniprot:P46472
Length = 433
Score = 458 (166.3 bits), Expect = 1.8e-42, P = 1.8e-42
Identities = 109/267 (40%), Positives = 156/267 (58%)
Query: 370 LQVDES--VSFDDIGGLSEYIDALKEMVFFPLLYPDFFASYHITPPRGVLLCGPPGTGKT 427
+QV+E V++ D+GG E I+ L+E+V PLL+P+ F + I PP+GVLL GPPGTGKT
Sbjct: 164 MQVEEKPDVTYSDVGGCKEQIEKLREVVETPLLHPERFVNLGIEPPKGVLLFGPPGTGKT 223
Query: 428 LIARALACAASKAGQKVSFYMRKGADVLSKWVGEAERQLKLLFEEAQRNQPSIIFFDEID 487
L ARA+A +V G++++ K+VGE R ++ LFE A+ + +IFFDEID
Sbjct: 224 LCARAVANRTDACFIRVI-----GSELVQKYVGEGARMVRELFEMARTKKACLIFFDEID 278
Query: 488 GLAPVRSSKQEQIHNSIVSTLLAL---MDGLDSRGQVVLIGATNRVDAIDGALRRPGRFD 544
+ R N + T+L L +DG D RG + ++ ATNR D +D AL RPGR D
Sbjct: 279 AIGGARFDDGAGGDNEVQRTMLELINQLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLD 338
Query: 545 REFNFPLPGCEARAEILDIHTRKWKQPPSRELKSELAAS-CVGYCGADLKALCTEAAIRA 603
R+ F LP E R I IH R R+++ EL A C GA+++++CTEA + A
Sbjct: 339 RKIEFSLPDLEGRTHIFKIHARSMSV--ERDIRFELLARLCPNSTGAEIRSVCTEAGMFA 396
Query: 604 FREKYPQVYTSDDKFLIDVDSVTVEKY 630
R + +V T D FL V+ V ++ Y
Sbjct: 397 IRARR-KVATEKD-FLEAVNKV-IKSY 420
>ASPGD|ASPL0000034636 [details] [associations]
symbol:AN2917 species:162425 "Emericella nidulans"
[GO:0070682 "proteasome regulatory particle assembly" evidence=IEA]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0045732 "positive regulation of protein catabolic
process" evidence=IEA] [GO:0045899 "positive regulation of RNA
polymerase II transcriptional preinitiation complex assembly"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005829
"cytosol" evidence=IEA] [GO:0008540 "proteasome regulatory
particle, base subcomplex" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 EMBL:BN001306
EMBL:AACD01000051 GO:GO:0030163 GO:GO:0017111 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 KO:K03061 OMA:DIRWELI
OrthoDB:EOG4B01XN RefSeq:XP_660521.1 ProteinModelPortal:Q5B963
STRING:Q5B963 EnsemblFungi:CADANIAT00010170 GeneID:2874156
KEGG:ani:AN2917.2 Uniprot:Q5B963
Length = 443
Score = 440 (159.9 bits), Expect = 1.8e-42, Sum P(2) = 1.8e-42
Identities = 105/254 (41%), Positives = 147/254 (57%)
Query: 376 VSFDDIGGLSEYIDALKEMVFFPLLYPDFFASYHITPPRGVLLCGPPGTGKTLIARALAC 435
V++ D+GG E I+ L+E+V PLL P+ F + I PP+G LL GPPGTGKTL ARA+A
Sbjct: 182 VTYGDVGGCKEQIEKLREVVEMPLLSPERFVNLGIDPPKGALLYGPPGTGKTLCARAVAN 241
Query: 436 AASKAGQKVSFYMRKGADVLSKWVGEAERQLKLLFEEAQRNQPSIIFFDEIDGLAPVRSS 495
+F G++++ K+VGE R ++ LFE A+ + IIFFDEID + R
Sbjct: 242 RTD-----ATFIRVIGSELVQKYVGEGARMVRELFEMARTKKACIIFFDEIDAVGGARFD 296
Query: 496 KQEQIHNSIVSTLLAL---MDGLDSRGQVVLIGATNRVDAIDGALRRPGRFDREFNFPLP 552
N + T+L L +DG D+RG + ++ ATNR +D AL RPGR DR+ F LP
Sbjct: 297 DGAGGDNEVQRTMLELITQLDGFDARGNIKVMFATNRPSTLDPALMRPGRIDRKIEFSLP 356
Query: 553 GCEARAEILDIHTRKWKQPPSRELKSELAAS-CVGYCGADLKALCTEAAIRAFREKYPQV 611
E RA IL IH + R+++ EL + C GA+L+++ TEA + A R + +V
Sbjct: 357 DVEGRANILRIHAKSMSV--ERDIRWELISRLCPNATGAELRSVATEAGMFAIRARR-KV 413
Query: 612 YTSDDKFLIDVDSV 625
T D FL VD V
Sbjct: 414 ATEKD-FLAAVDKV 426
Score = 44 (20.5 bits), Expect = 1.8e-42, Sum P(2) = 1.8e-42
Identities = 17/69 (24%), Positives = 30/69 (43%)
Query: 117 RMRNNMSQDELSPSKRKKVV--EAKPTPRREGLRPRRSMVATRKQLNLDSGDEQGSSEEK 174
+ + N + DE P K+ + E + G P + + K+L + Q S EK
Sbjct: 11 KYKKNFADDE-EPEKKITPLTDEDIAVLKTYGAAPYANAL---KKLEKQIKERQASVNEK 66
Query: 175 VGQDETENG 183
+G E++ G
Sbjct: 67 IGVKESDTG 75
>POMBASE|SPBC56F2.07c [details] [associations]
symbol:SPBC56F2.07c "ribosome biogenesis factor
recycling AAA family ATPase (predicted)" species:4896
"Schizosaccharomyces pombe" [GO:0005524 "ATP binding" evidence=ISM]
[GO:0005829 "cytosol" evidence=IDA] [GO:0016887 "ATPase activity"
evidence=ISM] [GO:0042273 "ribosomal large subunit biogenesis"
evidence=ISO] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
PomBase:SPBC56F2.07c GO:GO:0005829 GO:GO:0005524 EMBL:CU329671
GenomeReviews:CU329671_GR GO:GO:0016887 PIR:T40537
RefSeq:NP_596710.1 HSSP:Q01853 ProteinModelPortal:O60058
PRIDE:O60058 EnsemblFungi:SPBC56F2.07c.1 GeneID:2540537
KEGG:spo:SPBC56F2.07c eggNOG:COG0464 HOGENOM:HOG000223225 KO:K14575
OMA:SSENMAT OrthoDB:EOG49CTH0 NextBio:20801663 GO:GO:0042273
Uniprot:O60058
Length = 809
Score = 468 (169.8 bits), Expect = 2.1e-42, Sum P(3) = 2.1e-42
Identities = 114/312 (36%), Positives = 174/312 (55%)
Query: 336 AASGWGHQGDTLAALTSGIQTAGPSSKGGADIQPLQVDES-VSFDDIGGLSEYIDALKEM 394
AAS + L L +T ++G + Q S V+F IGGL I ++++
Sbjct: 235 AASSMEIETPDLLKLPHEDRTQSAYNQGSEETQNFDGPPSAVTFSSIGGLQAQIAQIRDI 294
Query: 395 VFFPLLYPDFFASYHITPPRGVLLCGPPGTGKTLIARALACAASKAGQKVSFYMRKGADV 454
V P P+ F ++I PPRGVLL GPPGTGKT++ RA+A A+ + G V
Sbjct: 295 VELPFQNPELFKFFNIMPPRGVLLYGPPGTGKTMVMRAVAAEAN-----AQVFTIDGPSV 349
Query: 455 LSKWVGEAERQLKLLFEEAQRNQPSIIFFDEIDGLAPVRSSKQEQIHNSIVSTLLALMDG 514
+ K++GE E +L+ +FE+A+ +QPSIIF DEID LAP R+ + + V+TLL L+DG
Sbjct: 350 VGKYLGETESRLRKIFEDARAHQPSIIFIDEIDALAPKRTEDVSEAESRAVATLLTLLDG 409
Query: 515 LDSRGQVVLIGATNRVDAIDGALRRPGRFDREFNFPLPGCEARAEILDIHTRKWKQPPSR 574
+ + G+VV+I ATNR ++ID ALRRPGR ++E +P AR +I+ + +
Sbjct: 410 MANAGKVVVIAATNRPNSIDEALRRPGRLEKEIEIGIPDKSARLDIIKLLLSGVPNEIND 469
Query: 575 ELKSELAASCVGYCGADLKALCTEAAIRAFREKYPQVYTSDDKFLIDV-DSVTVEKYHFI 633
+LA+ Y GADL A+ EAA+RA + + D +D+ +V ++ F
Sbjct: 470 AQLEDLASRTHAYVGADLAAVVREAALRAIKRT---ISLQKDTSGLDIFGAVQMDDLEF- 525
Query: 634 EAMSTITPAAHR 645
A+S++ +A R
Sbjct: 526 -ALSSVRQSAMR 536
Score = 398 (145.2 bits), Expect = 6.9e-33, Sum P(2) = 6.9e-33
Identities = 92/232 (39%), Positives = 138/232 (59%)
Query: 375 SVSFDDIGGLSEYIDALKEMVFFPLLYPDFFASYHITPPRGVLLCGPPGTGKTLIARALA 434
+V + DIGG E LKE V +PL + + F+ + PP+GVLL GPPG KT+ A+A+A
Sbjct: 544 NVHWSDIGGQEEVKQKLKESVEWPLTHGETFSRLGVRPPKGVLLYGPPGCSKTITAKAIA 603
Query: 435 CAASKAGQKVSFYMRKGADVLSKWVGEAERQLKLLFEEAQRNQPSIIFFDEIDGLAPVRS 494
++ G ++F KG ++ K+VGE+ER ++ +F++A++ PS+IFFDEID L R
Sbjct: 604 ---TETG--LNFIAVKGPELFDKFVGESERAVRQVFQKARQASPSVIFFDEIDALTANRG 658
Query: 495 SKQEQIHNSIVSTLLALMDGLDSRGQVVLIGATNRVDAIDGALRRPGRFDREFNFPLPGC 554
++ + +V+ LL +DG+++ V+++ ATNR D ID AL RPGR DR P
Sbjct: 659 --EDNSSDRVVAALLNELDGIEALRNVLVLAATNRPDMIDPALMRPGRLDRLLYVGPPNF 716
Query: 555 EARAEILDIHTRKWKQPPSRELKSELAASCVGYCGADLKALCTEAAIRAFRE 606
EAR +I+ I K K +L +A G GA++ ALC EA + A E
Sbjct: 717 EARKQIVKIQAEKMKFAEDVDLDL-IAEKTEGCSGAEVVALCQEAGLIAMHE 767
Score = 55 (24.4 bits), Expect = 2.1e-42, Sum P(3) = 2.1e-42
Identities = 24/86 (27%), Positives = 37/86 (43%)
Query: 692 LSHGSAIP-LVYRPR--LLLCGSEGTGVDHLGPAILHELEKFPVHSLGLPALLSDPSAKT 748
L+HG L RP +LL G G AI E + G P L D
Sbjct: 568 LTHGETFSRLGVRPPKGVLLYGPPGCSKTITAKAIATETGLNFIAVKG-PELF-DKFVGE 625
Query: 749 PEEALVHIFGEARRTTPSILYIPQFN 774
E A+ +F +AR+ +PS+++ + +
Sbjct: 626 SERAVRQVFQKARQASPSVIFFDEID 651
Score = 42 (19.8 bits), Expect = 2.1e-42, Sum P(3) = 2.1e-42
Identities = 11/30 (36%), Positives = 15/30 (50%)
Query: 160 LNLDSGDEQGSSEEKVGQDETENGNESDND 189
L+ SG E GSS+ +E+E D D
Sbjct: 167 LSAQSGTEVGSSQSSPSVNESEPKATEDLD 196
>UNIPROTKB|E1C4V5 [details] [associations]
symbol:PSMC2 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 TIGRFAMs:TIGR01242 GeneTree:ENSGT00550000074978
EMBL:AADN02036894 EMBL:AADN02036895 IPI:IPI00602342
Ensembl:ENSGALT00000013403 ArrayExpress:E1C4V5 Uniprot:E1C4V5
Length = 424
Score = 457 (165.9 bits), Expect = 2.3e-42, P = 2.3e-42
Identities = 108/267 (40%), Positives = 156/267 (58%)
Query: 370 LQVDES--VSFDDIGGLSEYIDALKEMVFFPLLYPDFFASYHITPPRGVLLCGPPGTGKT 427
+QV+E V++ D+GG E I+ L+E+V PLL+P+ F + I PP+GVLL GPPGTGKT
Sbjct: 155 MQVEEKPDVTYSDVGGCKEQIEKLREVVETPLLHPERFVNLGIEPPKGVLLFGPPGTGKT 214
Query: 428 LIARALACAASKAGQKVSFYMRKGADVLSKWVGEAERQLKLLFEEAQRNQPSIIFFDEID 487
L ARA+A +V G++++ K+VGE R ++ LFE A+ + +IFFDEID
Sbjct: 215 LCARAVANRTDACFIRVI-----GSELVQKYVGEGARMVRELFEMARTKKACLIFFDEID 269
Query: 488 GLAPVRSSKQEQIHNSIVSTLLAL---MDGLDSRGQVVLIGATNRVDAIDGALRRPGRFD 544
+ R N + T+L L +DG D RG + ++ ATNR D +D AL RPGR D
Sbjct: 270 AIGGARFDDGAGGDNEVQRTMLELINQLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLD 329
Query: 545 REFNFPLPGCEARAEILDIHTRKWKQPPSRELKSELAAS-CVGYCGADLKALCTEAAIRA 603
R+ F LP E R I IH R R+++ EL A C GA+++++CTEA + A
Sbjct: 330 RKIEFSLPDLEGRTHIFKIHARSMSV--ERDIRFELLARLCPNSTGAEIRSVCTEAGMFA 387
Query: 604 FREKYPQVYTSDDKFLIDVDSVTVEKY 630
R + ++ T D FL V+ V ++ Y
Sbjct: 388 IRARR-KIATEKD-FLEAVNKV-IKSY 411
>UNIPROTKB|F1NFL8 [details] [associations]
symbol:PSMC2 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0016887 "ATPase activity" evidence=IEA]
[GO:0022624 "proteasome accessory complex" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005739 GO:GO:0005524 GO:GO:0005634 GO:GO:0016887
GO:GO:0000502 GO:GO:0006511 TIGRFAMs:TIGR01242 OMA:DIRWELI
GeneTree:ENSGT00550000074978 EMBL:AADN02036894 EMBL:AADN02036895
IPI:IPI00821647 Ensembl:ENSGALT00000039595 ArrayExpress:F1NFL8
Uniprot:F1NFL8
Length = 432
Score = 457 (165.9 bits), Expect = 2.3e-42, P = 2.3e-42
Identities = 108/267 (40%), Positives = 156/267 (58%)
Query: 370 LQVDES--VSFDDIGGLSEYIDALKEMVFFPLLYPDFFASYHITPPRGVLLCGPPGTGKT 427
+QV+E V++ D+GG E I+ L+E+V PLL+P+ F + I PP+GVLL GPPGTGKT
Sbjct: 163 MQVEEKPDVTYSDVGGCKEQIEKLREVVETPLLHPERFVNLGIEPPKGVLLFGPPGTGKT 222
Query: 428 LIARALACAASKAGQKVSFYMRKGADVLSKWVGEAERQLKLLFEEAQRNQPSIIFFDEID 487
L ARA+A +V G++++ K+VGE R ++ LFE A+ + +IFFDEID
Sbjct: 223 LCARAVANRTDACFIRVI-----GSELVQKYVGEGARMVRELFEMARTKKACLIFFDEID 277
Query: 488 GLAPVRSSKQEQIHNSIVSTLLAL---MDGLDSRGQVVLIGATNRVDAIDGALRRPGRFD 544
+ R N + T+L L +DG D RG + ++ ATNR D +D AL RPGR D
Sbjct: 278 AIGGARFDDGAGGDNEVQRTMLELINQLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLD 337
Query: 545 REFNFPLPGCEARAEILDIHTRKWKQPPSRELKSELAAS-CVGYCGADLKALCTEAAIRA 603
R+ F LP E R I IH R R+++ EL A C GA+++++CTEA + A
Sbjct: 338 RKIEFSLPDLEGRTHIFKIHARSMSV--ERDIRFELLARLCPNSTGAEIRSVCTEAGMFA 395
Query: 604 FREKYPQVYTSDDKFLIDVDSVTVEKY 630
R + ++ T D FL V+ V ++ Y
Sbjct: 396 IRARR-KIATEKD-FLEAVNKV-IKSY 419
>UNIPROTKB|Q5E9F9 [details] [associations]
symbol:PSMC2 "26S protease regulatory subunit 7"
species:9913 "Bos taurus" [GO:0000932 "cytoplasmic mRNA processing
body" evidence=ISS] [GO:0022624 "proteasome accessory complex"
evidence=ISS] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=ISS] [GO:0000502 "proteasome complex" evidence=ISS]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005739 GO:GO:0005524 GO:GO:0005634 GO:GO:0016887
GO:GO:0006511 HSSP:Q9WZ49 GO:GO:0000932 TIGRFAMs:TIGR01242
HOVERGEN:HBG000109 GO:GO:0022624 KO:K03061 OMA:DIRWELI
EMBL:BT020961 EMBL:BC102391 IPI:IPI00693210 RefSeq:NP_001015639.1
UniGene:Bt.24017 ProteinModelPortal:Q5E9F9 SMR:Q5E9F9 PRIDE:Q5E9F9
Ensembl:ENSBTAT00000065774 GeneID:530186 KEGG:bta:530186 CTD:5701
GeneTree:ENSGT00550000074978 OrthoDB:EOG4RXZ05 NextBio:20875201
Uniprot:Q5E9F9
Length = 433
Score = 457 (165.9 bits), Expect = 2.3e-42, P = 2.3e-42
Identities = 108/267 (40%), Positives = 156/267 (58%)
Query: 370 LQVDES--VSFDDIGGLSEYIDALKEMVFFPLLYPDFFASYHITPPRGVLLCGPPGTGKT 427
+QV+E V++ D+GG E I+ L+E+V PLL+P+ F + I PP+GVLL GPPGTGKT
Sbjct: 164 MQVEEKPDVTYSDVGGCKEQIEKLREVVETPLLHPERFVNLGIEPPKGVLLFGPPGTGKT 223
Query: 428 LIARALACAASKAGQKVSFYMRKGADVLSKWVGEAERQLKLLFEEAQRNQPSIIFFDEID 487
L ARA+A +V G++++ K+VGE R ++ LFE A+ + +IFFDEID
Sbjct: 224 LCARAVANRTDACFIRVI-----GSELVQKYVGEGARMVRELFEMARTKKACLIFFDEID 278
Query: 488 GLAPVRSSKQEQIHNSIVSTLLAL---MDGLDSRGQVVLIGATNRVDAIDGALRRPGRFD 544
+ R N + T+L L +DG D RG + ++ ATNR D +D AL RPGR D
Sbjct: 279 AIGGARFDDGAGGDNEVQRTMLELINQLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLD 338
Query: 545 REFNFPLPGCEARAEILDIHTRKWKQPPSRELKSELAAS-CVGYCGADLKALCTEAAIRA 603
R+ F LP E R I IH R R+++ EL A C GA+++++CTEA + A
Sbjct: 339 RKIEFSLPDLEGRTHIFKIHARSMSV--ERDIRFELLARLCPNSTGAEIRSVCTEAGMFA 396
Query: 604 FREKYPQVYTSDDKFLIDVDSVTVEKY 630
R + ++ T D FL V+ V ++ Y
Sbjct: 397 IRARR-KIATEKD-FLEAVNKV-IKSY 420
>UNIPROTKB|F1PPH7 [details] [associations]
symbol:PSMC2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0022624 "proteasome accessory complex"
evidence=IEA] [GO:0016887 "ATPase activity" evidence=IEA]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005739 GO:GO:0005524 GO:GO:0005634 GO:GO:0016887
GO:GO:0000502 GO:GO:0006511 TIGRFAMs:TIGR01242 KO:K03061
OMA:DIRWELI CTD:5701 GeneTree:ENSGT00550000074978 EMBL:AAEX03011248
RefSeq:XP_533103.3 ProteinModelPortal:F1PPH7
Ensembl:ENSCAFT00000006754 GeneID:475896 KEGG:cfa:475896
Uniprot:F1PPH7
Length = 433
Score = 457 (165.9 bits), Expect = 2.3e-42, P = 2.3e-42
Identities = 108/267 (40%), Positives = 156/267 (58%)
Query: 370 LQVDES--VSFDDIGGLSEYIDALKEMVFFPLLYPDFFASYHITPPRGVLLCGPPGTGKT 427
+QV+E V++ D+GG E I+ L+E+V PLL+P+ F + I PP+GVLL GPPGTGKT
Sbjct: 164 MQVEEKPDVTYSDVGGCKEQIEKLREVVETPLLHPERFVNLGIEPPKGVLLFGPPGTGKT 223
Query: 428 LIARALACAASKAGQKVSFYMRKGADVLSKWVGEAERQLKLLFEEAQRNQPSIIFFDEID 487
L ARA+A +V G++++ K+VGE R ++ LFE A+ + +IFFDEID
Sbjct: 224 LCARAVANRTDACFIRVI-----GSELVQKYVGEGARMVRELFEMARTKKACLIFFDEID 278
Query: 488 GLAPVRSSKQEQIHNSIVSTLLAL---MDGLDSRGQVVLIGATNRVDAIDGALRRPGRFD 544
+ R N + T+L L +DG D RG + ++ ATNR D +D AL RPGR D
Sbjct: 279 AIGGARFDDGAGGDNEVQRTMLELINQLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLD 338
Query: 545 REFNFPLPGCEARAEILDIHTRKWKQPPSRELKSELAAS-CVGYCGADLKALCTEAAIRA 603
R+ F LP E R I IH R R+++ EL A C GA+++++CTEA + A
Sbjct: 339 RKIEFSLPDLEGRTHIFKIHARSMSV--ERDIRFELLARLCPNSTGAEIRSVCTEAGMFA 396
Query: 604 FREKYPQVYTSDDKFLIDVDSVTVEKY 630
R + ++ T D FL V+ V ++ Y
Sbjct: 397 IRARR-KIATEKD-FLEAVNKV-IKSY 420
>UNIPROTKB|B7Z5E2 [details] [associations]
symbol:PSMC2 "cDNA FLJ52353, highly similar to 26S protease
regulatory subunit 7" species:9606 "Homo sapiens" [GO:0005737
"cytoplasm" evidence=IEA] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0006508
"proteolysis" evidence=IEA] [GO:0008233 "peptidase activity"
evidence=IEA] [GO:0022624 "proteasome accessory complex"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 GO:GO:0006508
GO:GO:0030163 GO:GO:0017111 GO:GO:0008233 EMBL:AC004668
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 UniGene:Hs.437366
HGNC:HGNC:9548 ChiTaRS:PSMC2 EMBL:AC093701 EMBL:AK298821
IPI:IPI01015219 SMR:B7Z5E2 STRING:B7Z5E2 Ensembl:ENST00000544811
Uniprot:B7Z5E2
Length = 296
Score = 457 (165.9 bits), Expect = 2.3e-42, P = 2.3e-42
Identities = 108/267 (40%), Positives = 156/267 (58%)
Query: 370 LQVDES--VSFDDIGGLSEYIDALKEMVFFPLLYPDFFASYHITPPRGVLLCGPPGTGKT 427
+QV+E V++ D+GG E I+ L+E+V PLL+P+ F + I PP+GVLL GPPGTGKT
Sbjct: 27 MQVEEKPDVTYSDVGGCKEQIEKLREVVETPLLHPERFVNLGIEPPKGVLLFGPPGTGKT 86
Query: 428 LIARALACAASKAGQKVSFYMRKGADVLSKWVGEAERQLKLLFEEAQRNQPSIIFFDEID 487
L ARA+A +V G++++ K+VGE R ++ LFE A+ + +IFFDEID
Sbjct: 87 LCARAVANRTDACFIRVI-----GSELVQKYVGEGARMVRELFEMARTKKACLIFFDEID 141
Query: 488 GLAPVRSSKQEQIHNSIVSTLLAL---MDGLDSRGQVVLIGATNRVDAIDGALRRPGRFD 544
+ R N + T+L L +DG D RG + ++ ATNR D +D AL RPGR D
Sbjct: 142 AIGGARFDDGAGGDNEVQRTMLELINQLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLD 201
Query: 545 REFNFPLPGCEARAEILDIHTRKWKQPPSRELKSELAAS-CVGYCGADLKALCTEAAIRA 603
R+ F LP E R I IH R R+++ EL A C GA+++++CTEA + A
Sbjct: 202 RKIEFSLPDLEGRTHIFKIHARSMSV--ERDIRFELLARLCPNSTGAEIRSVCTEAGMFA 259
Query: 604 FREKYPQVYTSDDKFLIDVDSVTVEKY 630
R + ++ T D FL V+ V ++ Y
Sbjct: 260 IRARR-KIATEKD-FLEAVNKV-IKSY 283
>UNIPROTKB|P35998 [details] [associations]
symbol:PSMC2 "26S protease regulatory subunit 7"
species:9606 "Homo sapiens" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0019048 "virus-host interaction" evidence=IEA] [GO:0005515
"protein binding" evidence=IPI] [GO:0005737 "cytoplasm"
evidence=IDA;TAS] [GO:0016887 "ATPase activity" evidence=IDA]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IDA] [GO:0000502 "proteasome complex" evidence=IDA]
[GO:0000932 "cytoplasmic mRNA processing body" evidence=ISS]
[GO:0022624 "proteasome accessory complex" evidence=ISS]
[GO:0000075 "cell cycle checkpoint" evidence=TAS] [GO:0000082 "G1/S
transition of mitotic cell cycle" evidence=TAS] [GO:0000084 "S
phase of mitotic cell cycle" evidence=TAS] [GO:0000209 "protein
polyubiquitination" evidence=TAS] [GO:0000216 "M/G1 transition of
mitotic cell cycle" evidence=TAS] [GO:0000278 "mitotic cell cycle"
evidence=TAS] [GO:0002474 "antigen processing and presentation of
peptide antigen via MHC class I" evidence=TAS] [GO:0002479 "antigen
processing and presentation of exogenous peptide antigen via MHC
class I, TAP-dependent" evidence=TAS] [GO:0005654 "nucleoplasm"
evidence=TAS] [GO:0005829 "cytosol" evidence=TAS] [GO:0006521
"regulation of cellular amino acid metabolic process" evidence=TAS]
[GO:0006915 "apoptotic process" evidence=TAS] [GO:0006977 "DNA
damage response, signal transduction by p53 class mediator
resulting in cell cycle arrest" evidence=TAS] [GO:0010467 "gene
expression" evidence=TAS] [GO:0016032 "viral reproduction"
evidence=TAS] [GO:0016070 "RNA metabolic process" evidence=TAS]
[GO:0016071 "mRNA metabolic process" evidence=TAS] [GO:0031145
"anaphase-promoting complex-dependent proteasomal
ubiquitin-dependent protein catabolic process" evidence=TAS]
[GO:0034641 "cellular nitrogen compound metabolic process"
evidence=TAS] [GO:0042590 "antigen processing and presentation of
exogenous peptide antigen via MHC class I" evidence=TAS]
[GO:0042981 "regulation of apoptotic process" evidence=TAS]
[GO:0044281 "small molecule metabolic process" evidence=TAS]
[GO:0051436 "negative regulation of ubiquitin-protein ligase
activity involved in mitotic cell cycle" evidence=TAS] [GO:0051437
"positive regulation of ubiquitin-protein ligase activity involved
in mitotic cell cycle" evidence=TAS] [GO:0051439 "regulation of
ubiquitin-protein ligase activity involved in mitotic cell cycle"
evidence=TAS] [GO:0006200 "ATP catabolic process" evidence=IDA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005730 "nucleolus"
evidence=IDA] [GO:0005739 "mitochondrion" evidence=IDA]
Reactome:REACT_13505 Reactome:REACT_578 Reactome:REACT_71
Reactome:REACT_21257 Reactome:REACT_6850 Reactome:REACT_111217
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005829 GO:GO:0005739 GO:GO:0005524 Reactome:REACT_111102
Reactome:REACT_116125 Reactome:REACT_6900 GO:GO:0006915
GO:GO:0010467 GO:GO:0016071 Reactome:REACT_115566 GO:GO:0019048
GO:GO:0005654 GO:GO:0002479 GO:GO:0016032 Reactome:REACT_21300
GO:GO:0006977 GO:GO:0042981 GO:GO:0000082 GO:GO:0016887
GO:GO:0051436 GO:GO:0000932 EMBL:CH471070 GO:GO:0000216
GO:GO:0000209 GO:GO:0000084 GO:GO:0031145 GO:GO:0051437
EMBL:CH236947 GO:GO:0006521 Reactome:REACT_383 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 GO:GO:0022624
HOGENOM:HOG000225143 KO:K03061 OMA:DIRWELI CTD:5701 EMBL:D11094
EMBL:AB075520 EMBL:BC002589 IPI:IPI00021435 PIR:S24353
RefSeq:NP_001191382.1 RefSeq:NP_002794.1 UniGene:Hs.437366
ProteinModelPortal:P35998 SMR:P35998 DIP:DIP-27554N IntAct:P35998
MINT:MINT-1163662 STRING:P35998 PhosphoSite:P35998 DMDM:547930
OGP:P35998 REPRODUCTION-2DPAGE:IPI00021435
REPRODUCTION-2DPAGE:P35998 PaxDb:P35998 PeptideAtlas:P35998
PRIDE:P35998 DNASU:5701 Ensembl:ENST00000292644
Ensembl:ENST00000435765 GeneID:5701 KEGG:hsa:5701 UCSC:uc003vbs.3
GeneCards:GC07P102984 HGNC:HGNC:9548 HPA:HPA019238 MIM:154365
neXtProt:NX_P35998 PharmGKB:PA33893 InParanoid:P35998
PhylomeDB:P35998 ChiTaRS:PSMC2 GenomeRNAi:5701 NextBio:22150
ArrayExpress:P35998 Bgee:P35998 CleanEx:HS_PSMC2
Genevestigator:P35998 GermOnline:ENSG00000161057 Uniprot:P35998
Length = 433
Score = 457 (165.9 bits), Expect = 2.3e-42, P = 2.3e-42
Identities = 108/267 (40%), Positives = 156/267 (58%)
Query: 370 LQVDES--VSFDDIGGLSEYIDALKEMVFFPLLYPDFFASYHITPPRGVLLCGPPGTGKT 427
+QV+E V++ D+GG E I+ L+E+V PLL+P+ F + I PP+GVLL GPPGTGKT
Sbjct: 164 MQVEEKPDVTYSDVGGCKEQIEKLREVVETPLLHPERFVNLGIEPPKGVLLFGPPGTGKT 223
Query: 428 LIARALACAASKAGQKVSFYMRKGADVLSKWVGEAERQLKLLFEEAQRNQPSIIFFDEID 487
L ARA+A +V G++++ K+VGE R ++ LFE A+ + +IFFDEID
Sbjct: 224 LCARAVANRTDACFIRVI-----GSELVQKYVGEGARMVRELFEMARTKKACLIFFDEID 278
Query: 488 GLAPVRSSKQEQIHNSIVSTLLAL---MDGLDSRGQVVLIGATNRVDAIDGALRRPGRFD 544
+ R N + T+L L +DG D RG + ++ ATNR D +D AL RPGR D
Sbjct: 279 AIGGARFDDGAGGDNEVQRTMLELINQLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLD 338
Query: 545 REFNFPLPGCEARAEILDIHTRKWKQPPSRELKSELAAS-CVGYCGADLKALCTEAAIRA 603
R+ F LP E R I IH R R+++ EL A C GA+++++CTEA + A
Sbjct: 339 RKIEFSLPDLEGRTHIFKIHARSMSV--ERDIRFELLARLCPNSTGAEIRSVCTEAGMFA 396
Query: 604 FREKYPQVYTSDDKFLIDVDSVTVEKY 630
R + ++ T D FL V+ V ++ Y
Sbjct: 397 IRARR-KIATEKD-FLEAVNKV-IKSY 420
>UNIPROTKB|F1SB53 [details] [associations]
symbol:PSMC2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 TIGRFAMs:TIGR01242 GeneTree:ENSGT00550000074978
OMA:HIFTIHA EMBL:CU570825 Ensembl:ENSSSCT00000016802 Uniprot:F1SB53
Length = 475
Score = 457 (165.9 bits), Expect = 2.3e-42, P = 2.3e-42
Identities = 108/267 (40%), Positives = 156/267 (58%)
Query: 370 LQVDES--VSFDDIGGLSEYIDALKEMVFFPLLYPDFFASYHITPPRGVLLCGPPGTGKT 427
+QV+E V++ D+GG E I+ L+E+V PLL+P+ F + I PP+GVLL GPPGTGKT
Sbjct: 206 MQVEEKPDVTYSDVGGCKEQIEKLREVVETPLLHPERFVNLGIEPPKGVLLFGPPGTGKT 265
Query: 428 LIARALACAASKAGQKVSFYMRKGADVLSKWVGEAERQLKLLFEEAQRNQPSIIFFDEID 487
L ARA+A +V G++++ K+VGE R ++ LFE A+ + +IFFDEID
Sbjct: 266 LCARAVANRTDACFIRVI-----GSELVQKYVGEGARMVRELFEMARTKKACLIFFDEID 320
Query: 488 GLAPVRSSKQEQIHNSIVSTLLAL---MDGLDSRGQVVLIGATNRVDAIDGALRRPGRFD 544
+ R N + T+L L +DG D RG + ++ ATNR D +D AL RPGR D
Sbjct: 321 AIGGARFDDGAGGDNEVQRTMLELINQLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLD 380
Query: 545 REFNFPLPGCEARAEILDIHTRKWKQPPSRELKSELAAS-CVGYCGADLKALCTEAAIRA 603
R+ F LP E R I IH R R+++ EL A C GA+++++CTEA + A
Sbjct: 381 RKIEFSLPDLEGRTHIFKIHARSMSV--ERDIRFELLARLCPNSTGAEIRSVCTEAGMFA 438
Query: 604 FREKYPQVYTSDDKFLIDVDSVTVEKY 630
R + ++ T D FL V+ V ++ Y
Sbjct: 439 IRARR-KIATEKD-FLEAVNKV-IKSY 462
>UNIPROTKB|I3LJ30 [details] [associations]
symbol:I3LJ30 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 TIGRFAMs:TIGR01242 GeneTree:ENSGT00550000074978
Ensembl:ENSSSCT00000030050 OMA:WDLAYEN Uniprot:I3LJ30
Length = 434
Score = 457 (165.9 bits), Expect = 2.3e-42, P = 2.3e-42
Identities = 108/267 (40%), Positives = 156/267 (58%)
Query: 370 LQVDES--VSFDDIGGLSEYIDALKEMVFFPLLYPDFFASYHITPPRGVLLCGPPGTGKT 427
+QV+E V++ D+GG E I+ L+E+V PLL+P+ F + I PP+GVLL GPPGTGKT
Sbjct: 165 MQVEEKPDVTYSDVGGCKEQIEKLREVVETPLLHPERFVNLGIEPPKGVLLFGPPGTGKT 224
Query: 428 LIARALACAASKAGQKVSFYMRKGADVLSKWVGEAERQLKLLFEEAQRNQPSIIFFDEID 487
L ARA+A +V G++++ K+VGE R ++ LFE A+ + +IFFDEID
Sbjct: 225 LCARAVANRTDACFIRVI-----GSELVQKYVGEGARMVRELFEMARTKKACLIFFDEID 279
Query: 488 GLAPVRSSKQEQIHNSIVSTLLAL---MDGLDSRGQVVLIGATNRVDAIDGALRRPGRFD 544
+ R N + T+L L +DG D RG + ++ ATNR D +D AL RPGR D
Sbjct: 280 AIGGARFDDGAGGDNEVQRTMLELINQLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLD 339
Query: 545 REFNFPLPGCEARAEILDIHTRKWKQPPSRELKSELAAS-CVGYCGADLKALCTEAAIRA 603
R+ F LP E R I IH R R+++ EL A C GA+++++CTEA + A
Sbjct: 340 RKIEFSLPDLEGRTHIFKIHARSMSV--ERDIRFELLARLCPNSTGAEIRSVCTEAGMFA 397
Query: 604 FREKYPQVYTSDDKFLIDVDSVTVEKY 630
R + ++ T D FL V+ V ++ Y
Sbjct: 398 IRARR-KIATEKD-FLEAVNKV-IKSY 421
>UNIPROTKB|Q4R4R0 [details] [associations]
symbol:PSMC2 "26S protease regulatory subunit 7"
species:9541 "Macaca fascicularis" [GO:0000502 "proteasome complex"
evidence=ISS] [GO:0000932 "cytoplasmic mRNA processing body"
evidence=ISS] [GO:0006200 "ATP catabolic process" evidence=ISS]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=ISS] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0022624 "proteasome accessory complex" evidence=ISS]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0016887 GO:GO:0006511 HSSP:Q9WZ49
GO:GO:0000932 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 GO:GO:0022624
EMBL:AB169834 ProteinModelPortal:Q4R4R0 SMR:Q4R4R0 PRIDE:Q4R4R0
Uniprot:Q4R4R0
Length = 433
Score = 457 (165.9 bits), Expect = 2.3e-42, P = 2.3e-42
Identities = 108/267 (40%), Positives = 156/267 (58%)
Query: 370 LQVDES--VSFDDIGGLSEYIDALKEMVFFPLLYPDFFASYHITPPRGVLLCGPPGTGKT 427
+QV+E V++ D+GG E I+ L+E+V PLL+P+ F + I PP+GVLL GPPGTGKT
Sbjct: 164 MQVEEKPDVTYSDVGGCKEQIEKLREVVETPLLHPERFVNLGIEPPKGVLLFGPPGTGKT 223
Query: 428 LIARALACAASKAGQKVSFYMRKGADVLSKWVGEAERQLKLLFEEAQRNQPSIIFFDEID 487
L ARA+A +V G++++ K+VGE R ++ LFE A+ + +IFFDEID
Sbjct: 224 LCARAVANRTDACFIRVI-----GSELVQKYVGEGARMVRELFEMARTKKACLIFFDEID 278
Query: 488 GLAPVRSSKQEQIHNSIVSTLLAL---MDGLDSRGQVVLIGATNRVDAIDGALRRPGRFD 544
+ R N + T+L L +DG D RG + ++ ATNR D +D AL RPGR D
Sbjct: 279 AIGGARFDDGAGGDNEVQRTMLELINQLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLD 338
Query: 545 REFNFPLPGCEARAEILDIHTRKWKQPPSRELKSELAAS-CVGYCGADLKALCTEAAIRA 603
R+ F LP E R I IH R R+++ EL A C GA+++++CTEA + A
Sbjct: 339 RKIEFSLPDLEGRTHIFKIHARSMSV--ERDIRFELLARLCPNSTGAEIRSVCTEAGMFA 396
Query: 604 FREKYPQVYTSDDKFLIDVDSVTVEKY 630
R + ++ T D FL V+ V ++ Y
Sbjct: 397 IRARR-KIATEKD-FLEAVNKV-IKSY 420
>MGI|MGI:109555 [details] [associations]
symbol:Psmc2 "proteasome (prosome, macropain) 26S subunit,
ATPase 2" species:10090 "Mus musculus" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0000502 "proteasome complex"
evidence=ISO] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISO] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0006200
"ATP catabolic process" evidence=ISO] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=ISO]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0016887 "ATPase
activity" evidence=ISO] [GO:0017025 "TBP-class protein binding"
evidence=ISO] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0022624 "proteasome accessory complex"
evidence=IDA] [GO:0030163 "protein catabolic process" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
MGI:MGI:109555 GO:GO:0005739 GO:GO:0005524 GO:GO:0005634
GO:GO:0016887 GO:GO:0006511 GO:GO:0000932 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 GO:GO:0022624
OrthoDB:EOG4RXZ05 ChiTaRS:PSMC2 EMBL:AK005083 EMBL:AK168548
EMBL:BC005462 EMBL:U61283 IPI:IPI00270326 PIR:S39349
UniGene:Mm.2462 ProteinModelPortal:P46471 SMR:P46471 IntAct:P46471
STRING:P46471 PhosphoSite:P46471 REPRODUCTION-2DPAGE:P46471
SWISS-2DPAGE:P46471 PaxDb:P46471 PRIDE:P46471 InParanoid:P46471
Bgee:P46471 Genevestigator:P46471 GermOnline:ENSMUSG00000028932
Uniprot:P46471
Length = 433
Score = 457 (165.9 bits), Expect = 2.3e-42, P = 2.3e-42
Identities = 108/267 (40%), Positives = 156/267 (58%)
Query: 370 LQVDES--VSFDDIGGLSEYIDALKEMVFFPLLYPDFFASYHITPPRGVLLCGPPGTGKT 427
+QV+E V++ D+GG E I+ L+E+V PLL+P+ F + I PP+GVLL GPPGTGKT
Sbjct: 164 MQVEEKPDVTYSDVGGCKEQIEKLREVVETPLLHPERFVNLGIEPPKGVLLFGPPGTGKT 223
Query: 428 LIARALACAASKAGQKVSFYMRKGADVLSKWVGEAERQLKLLFEEAQRNQPSIIFFDEID 487
L ARA+A +V G++++ K+VGE R ++ LFE A+ + +IFFDEID
Sbjct: 224 LCARAVANRTDACFIRVI-----GSELVQKYVGEGARMVRELFEMARTKKACLIFFDEID 278
Query: 488 GLAPVRSSKQEQIHNSIVSTLLAL---MDGLDSRGQVVLIGATNRVDAIDGALRRPGRFD 544
+ R N + T+L L +DG D RG + ++ ATNR D +D AL RPGR D
Sbjct: 279 AIGGARFDDGAGGDNEVQRTMLELINQLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLD 338
Query: 545 REFNFPLPGCEARAEILDIHTRKWKQPPSRELKSELAAS-CVGYCGADLKALCTEAAIRA 603
R+ F LP E R I IH R R+++ EL A C GA+++++CTEA + A
Sbjct: 339 RKIEFSLPDLEGRTHIFKIHARSMSV--ERDIRFELLARLCPNSTGAEIRSVCTEAGMFA 396
Query: 604 FREKYPQVYTSDDKFLIDVDSVTVEKY 630
R + ++ T D FL V+ V ++ Y
Sbjct: 397 IRARR-KIATEKD-FLEAVNKV-IKSY 420
>ZFIN|ZDB-GENE-040426-1327 [details] [associations]
symbol:psmc2 "proteasome (prosome, macropain) 26S
subunit, ATPase 2" species:7955 "Danio rerio" [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0000502 "proteasome complex"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 ZFIN:ZDB-GENE-040426-1327 GO:GO:0005524 GO:GO:0005737
GO:GO:0030163 GO:GO:0000502 GO:GO:0017111 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 HOGENOM:HOG000225143
KO:K03061 OMA:DIRWELI CTD:5701 GeneTree:ENSGT00550000074978
OrthoDB:EOG4RXZ05 HSSP:Q9LCZ4 EMBL:BX571796 EMBL:BC053187
IPI:IPI00491385 RefSeq:NP_957260.1 UniGene:Dr.75589 STRING:Q7T3B1
Ensembl:ENSDART00000019647 GeneID:393941 KEGG:dre:393941
InParanoid:Q7T3B1 NextBio:20814913 Uniprot:Q7T3B1
Length = 433
Score = 457 (165.9 bits), Expect = 2.3e-42, P = 2.3e-42
Identities = 108/267 (40%), Positives = 156/267 (58%)
Query: 370 LQVDES--VSFDDIGGLSEYIDALKEMVFFPLLYPDFFASYHITPPRGVLLCGPPGTGKT 427
+QV+E V++ D+GG E I+ L+E+V PLL+P+ F + I PP+GVLL GPPGTGKT
Sbjct: 164 MQVEEKPDVTYSDVGGCKEQIEKLREVVETPLLHPERFVNLGIEPPKGVLLFGPPGTGKT 223
Query: 428 LIARALACAASKAGQKVSFYMRKGADVLSKWVGEAERQLKLLFEEAQRNQPSIIFFDEID 487
L ARA+A +V G++++ K+VGE R ++ LFE A+ + +IFFDEID
Sbjct: 224 LCARAVANRTDACFIRVI-----GSELVQKYVGEGARMVRELFEMARTKKACLIFFDEID 278
Query: 488 GLAPVRSSKQEQIHNSIVSTLLAL---MDGLDSRGQVVLIGATNRVDAIDGALRRPGRFD 544
+ R N + T+L L +DG D RG + ++ ATNR D +D AL RPGR D
Sbjct: 279 AIGGARFDDGAGGDNEVQRTMLELINQLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLD 338
Query: 545 REFNFPLPGCEARAEILDIHTRKWKQPPSRELKSELAAS-CVGYCGADLKALCTEAAIRA 603
R+ F LP E R I IH R R+++ EL A C GA+++++CTEA + A
Sbjct: 339 RKIEFSLPDLEGRTHIFKIHARSMSV--ERDIRFELLARLCPNSTGAEIRSVCTEAGMFA 396
Query: 604 FREKYPQVYTSDDKFLIDVDSVTVEKY 630
R + ++ T D FL V+ V ++ Y
Sbjct: 397 IRARR-KIATEKD-FLEAVNKV-IKSY 420
>SGD|S000001628 [details] [associations]
symbol:RPT1 "ATPase of the 19S regulatory particle of the 26S
proteasome" species:4932 "Saccharomyces cerevisiae" [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0070682 "proteasome
regulatory particle assembly" evidence=IMP] [GO:0008540 "proteasome
regulatory particle, base subcomplex" evidence=IDA] [GO:0045732
"positive regulation of protein catabolic process" evidence=IDA]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IPI] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0045899 "positive regulation of RNA polymerase II
transcriptional preinitiation complex assembly" evidence=IMP]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0000502
"proteasome complex" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 SGD:S000001628 GO:GO:0005524 GO:GO:0005634
GO:GO:0005737 EMBL:BK006944 GO:GO:0006511 GO:GO:0017111
GO:GO:0045899 GO:GO:0045732 PDB:3VLF PDB:4A3V PDBsum:3VLF
PDBsum:4A3V GO:GO:0070682 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 GO:GO:0008540 PDB:4B4T PDBsum:4B4T KO:K03061
OMA:DIRWELI GeneTree:ENSGT00550000074978 OrthoDB:EOG4B01XN
EMBL:Z22817 EMBL:X73571 EMBL:Z28145 PIR:S34354 RefSeq:NP_012777.1
ProteinModelPortal:P33299 SMR:P33299 DIP:DIP-2883N IntAct:P33299
MINT:MINT-612502 STRING:P33299 SWISS-2DPAGE:P33299 PaxDb:P33299
PeptideAtlas:P33299 PRIDE:P33299 EnsemblFungi:YKL145W GeneID:853712
KEGG:sce:YKL145W CYGD:YKL145w NextBio:974719 Genevestigator:P33299
GermOnline:YKL145W Uniprot:P33299
Length = 467
Score = 443 (161.0 bits), Expect = 2.9e-42, Sum P(2) = 2.9e-42
Identities = 107/262 (40%), Positives = 153/262 (58%)
Query: 370 LQVDES--VSFDDIGGLSEYIDALKEMVFFPLLYPDFFASYHITPPRGVLLCGPPGTGKT 427
+ V+E V++ D+GG + I+ L+E+V PLL P+ FA+ I PP+G+LL GPPGTGKT
Sbjct: 198 MTVEEKPDVTYSDVGGCKDQIEKLREVVELPLLSPERFATLGIDPPKGILLYGPPGTGKT 257
Query: 428 LIARALACAASKAGQKVSFYMRKGADVLSKWVGEAERQLKLLFEEAQRNQPSIIFFDEID 487
L ARA+A +F G++++ K+VGE R ++ LFE A+ + IIFFDEID
Sbjct: 258 LCARAVANRTD-----ATFIRVIGSELVQKYVGEGARMVRELFEMARTKKACIIFFDEID 312
Query: 488 GLAPVRSSKQEQIHNSIVSTLLAL---MDGLDSRGQVVLIGATNRVDAIDGALRRPGRFD 544
+ R N + T+L L +DG D RG + ++ ATNR + +D AL RPGR D
Sbjct: 313 AVGGARFDDGAGGDNEVQRTMLELITQLDGFDPRGNIKVMFATNRPNTLDPALLRPGRID 372
Query: 545 REFNFPLPGCEARAEILDIHTRKWKQPPSRELKSELAAS-CVGYCGADLKALCTEAAIRA 603
R+ F LP E RA I IH++ R ++ EL + C GA+L+++CTEA + A
Sbjct: 373 RKVEFSLPDLEGRANIFRIHSKSMSV--ERGIRWELISRLCPNSTGAELRSVCTEAGMFA 430
Query: 604 FREKYPQVYTSDDKFLIDVDSV 625
R + +V T D FL VD V
Sbjct: 431 IRARR-KVATEKD-FLKAVDKV 450
Score = 39 (18.8 bits), Expect = 2.9e-42, Sum P(2) = 2.9e-42
Identities = 10/29 (34%), Positives = 14/29 (48%)
Query: 155 ATRKQLNLDSGDEQGSSEEKVGQDETENG 183
A KQ D D + +EK G E++ G
Sbjct: 47 AKLKQTENDLKDIEARIKEKAGVKESDTG 75
Score = 38 (18.4 bits), Expect = 3.7e-42, Sum P(2) = 3.7e-42
Identities = 8/31 (25%), Positives = 13/31 (41%)
Query: 166 DEQGSSEEKVGQDETENGNESDNDADDGQNE 196
DE + G + N N+ DAD+ +
Sbjct: 113 DETTTDNNNSGNSNS-NSNQQSTDADEDDED 142
>UNIPROTKB|A4FUZ3 [details] [associations]
symbol:PSMC1 "Proteasome (Prosome, macropain) 26S subunit,
ATPase, 1" species:9913 "Bos taurus" [GO:0022624 "proteasome
accessory complex" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0030163 GO:GO:0000502 GO:GO:0017111 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 HOGENOM:HOG000225143
OMA:FIRNQER GeneTree:ENSGT00550000074818 OrthoDB:EOG4D7Z5Q
EMBL:DAAA02030032 EMBL:BC123487 IPI:IPI00695877 UniGene:Bt.12340
SMR:A4FUZ3 STRING:A4FUZ3 Ensembl:ENSBTAT00000007135
InParanoid:A4FUZ3 Uniprot:A4FUZ3
Length = 440
Score = 443 (161.0 bits), Expect = 2.9e-42, Sum P(2) = 2.9e-42
Identities = 97/244 (39%), Positives = 141/244 (57%)
Query: 377 SFDDIGGLSEYIDALKEMVFFPLLYPDFFASYHITPPRGVLLCGPPGTGKTLIARALACA 436
++ DIGGL I +KE V PL +P+++ I PP+GV+L GPPGTGKTL+A+A+A
Sbjct: 183 TYADIGGLDNQIQEIKESVELPLTHPEYYEEMGIKPPKGVILYGPPGTGKTLLAKAVANQ 242
Query: 437 ASKAGQKVSFYMRKGADVLSKWVGEAERQLKLLFEEAQRNQPSIIFFDEIDGLAPVRSSK 496
S +F G++++ K++G+ + ++ LF A+ + PSI+F DEID + R
Sbjct: 243 TS-----ATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAIGTKRYDS 297
Query: 497 QEQIHNSIVSTLLALM---DGLDSRGQVVLIGATNRVDAIDGALRRPGRFDREFNFPLPG 553
I T+L L+ DG DSRG V +I ATNR++ +D AL RPGR DR+ FPLP
Sbjct: 298 NSGGEREIQRTMLELLNQLDGFDSRGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPD 357
Query: 554 CEARAEILDIHTRKWKQPPSRELKSELAASCVGYCGADLKALCTEAAIRAFREKYPQVYT 613
+ + I IHT + L +L + GAD+KA+CTEA + A RE+ +V
Sbjct: 358 EKTKKRIFQIHTSRMTLADDVTL-DDLIMAKDDLSGADIKAICTEAGLMALRERRMKVTN 416
Query: 614 SDDK 617
D K
Sbjct: 417 EDFK 420
Score = 39 (18.8 bits), Expect = 2.9e-42, Sum P(2) = 2.9e-42
Identities = 15/55 (27%), Positives = 20/55 (36%)
Query: 89 SVNLEDYTDSSGSEDEDLMRPSYRPLRNRMRN---NMSQDELSPSKRKKVVEAKP 140
SV E Y D+DL+ P L N + + D+ P VE P
Sbjct: 126 SVGSEHYVSILSFVDKDLLEPGCSVLLNHKVHAVIGVLMDDTDPLVTVMKVEKAP 180
>UNIPROTKB|F1PQ40 [details] [associations]
symbol:PSMC1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 TIGRFAMs:TIGR01242 KO:K03062 OMA:FIRNQER
GeneTree:ENSGT00550000074818 CTD:5700 EMBL:AAEX03005924
RefSeq:NP_001238880.1 ProteinModelPortal:F1PQ40
Ensembl:ENSCAFT00000027737 GeneID:100688636 KEGG:cfa:100688636
Uniprot:F1PQ40
Length = 440
Score = 443 (161.0 bits), Expect = 2.9e-42, Sum P(2) = 2.9e-42
Identities = 97/244 (39%), Positives = 141/244 (57%)
Query: 377 SFDDIGGLSEYIDALKEMVFFPLLYPDFFASYHITPPRGVLLCGPPGTGKTLIARALACA 436
++ DIGGL I +KE V PL +P+++ I PP+GV+L GPPGTGKTL+A+A+A
Sbjct: 183 TYADIGGLDNQIQEIKESVELPLTHPEYYEEMGIKPPKGVILYGPPGTGKTLLAKAVANQ 242
Query: 437 ASKAGQKVSFYMRKGADVLSKWVGEAERQLKLLFEEAQRNQPSIIFFDEIDGLAPVRSSK 496
S +F G++++ K++G+ + ++ LF A+ + PSI+F DEID + R
Sbjct: 243 TS-----ATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAIGTKRYDS 297
Query: 497 QEQIHNSIVSTLLALM---DGLDSRGQVVLIGATNRVDAIDGALRRPGRFDREFNFPLPG 553
I T+L L+ DG DSRG V +I ATNR++ +D AL RPGR DR+ FPLP
Sbjct: 298 NSGGEREIQRTMLELLNQLDGFDSRGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPD 357
Query: 554 CEARAEILDIHTRKWKQPPSRELKSELAASCVGYCGADLKALCTEAAIRAFREKYPQVYT 613
+ + I IHT + L +L + GAD+KA+CTEA + A RE+ +V
Sbjct: 358 EKTKKRIFQIHTSRMTLADDVTL-DDLIMAKDDLSGADIKAICTEAGLMALRERRMKVTN 416
Query: 614 SDDK 617
D K
Sbjct: 417 EDFK 420
Score = 39 (18.8 bits), Expect = 2.9e-42, Sum P(2) = 2.9e-42
Identities = 15/55 (27%), Positives = 20/55 (36%)
Query: 89 SVNLEDYTDSSGSEDEDLMRPSYRPLRNRMRN---NMSQDELSPSKRKKVVEAKP 140
SV E Y D+DL+ P L N + + D+ P VE P
Sbjct: 126 SVGSEHYVSILSFVDKDLLEPGCSVLLNHKVHAVIGVLMDDTDPLVTVMKVEKAP 180
>UNIPROTKB|B4DR63 [details] [associations]
symbol:PSMC1 "cDNA FLJ58247, highly similar to 26S protease
regulatory subunit 4" species:9606 "Homo sapiens" [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0006508 "proteolysis" evidence=IEA] [GO:0008233
"peptidase activity" evidence=IEA] [GO:0022624 "proteasome
accessory complex" evidence=IEA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0006508 GO:GO:0030163 GO:GO:0017111 GO:GO:0008233
EMBL:AL161662 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109
UniGene:Hs.356654 HGNC:HGNC:9547 EMBL:AL355074 EMBL:AK299121
IPI:IPI01015427 SMR:B4DR63 STRING:B4DR63 Ensembl:ENST00000543772
Uniprot:B4DR63
Length = 367
Score = 443 (161.0 bits), Expect = 2.9e-42, Sum P(2) = 2.9e-42
Identities = 97/244 (39%), Positives = 141/244 (57%)
Query: 377 SFDDIGGLSEYIDALKEMVFFPLLYPDFFASYHITPPRGVLLCGPPGTGKTLIARALACA 436
++ DIGGL I +KE V PL +P+++ I PP+GV+L GPPGTGKTL+A+A+A
Sbjct: 110 TYADIGGLDNQIQEIKESVELPLTHPEYYEEMGIKPPKGVILYGPPGTGKTLLAKAVANQ 169
Query: 437 ASKAGQKVSFYMRKGADVLSKWVGEAERQLKLLFEEAQRNQPSIIFFDEIDGLAPVRSSK 496
S +F G++++ K++G+ + ++ LF A+ + PSI+F DEID + R
Sbjct: 170 TS-----ATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAIGTKRYDS 224
Query: 497 QEQIHNSIVSTLLALM---DGLDSRGQVVLIGATNRVDAIDGALRRPGRFDREFNFPLPG 553
I T+L L+ DG DSRG V +I ATNR++ +D AL RPGR DR+ FPLP
Sbjct: 225 NSGGEREIQRTMLELLNQLDGFDSRGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPD 284
Query: 554 CEARAEILDIHTRKWKQPPSRELKSELAASCVGYCGADLKALCTEAAIRAFREKYPQVYT 613
+ + I IHT + L +L + GAD+KA+CTEA + A RE+ +V
Sbjct: 285 EKTKKRIFQIHTSRMTLADDVTL-DDLIMAKDDLSGADIKAICTEAGLMALRERRMKVTN 343
Query: 614 SDDK 617
D K
Sbjct: 344 EDFK 347
Score = 39 (18.8 bits), Expect = 2.9e-42, Sum P(2) = 2.9e-42
Identities = 15/55 (27%), Positives = 20/55 (36%)
Query: 89 SVNLEDYTDSSGSEDEDLMRPSYRPLRNRMRN---NMSQDELSPSKRKKVVEAKP 140
SV E Y D+DL+ P L N + + D+ P VE P
Sbjct: 53 SVGSEHYVSILSFVDKDLLEPGCSVLLNHKVHAVIGVLMDDTDPLVTVMKVEKAP 107
>UNIPROTKB|P62191 [details] [associations]
symbol:PSMC1 "26S protease regulatory subunit 4"
species:9606 "Homo sapiens" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0022624 "proteasome accessory complex" evidence=ISS]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0000502 "proteasome
complex" evidence=NAS] [GO:0000075 "cell cycle checkpoint"
evidence=TAS] [GO:0000082 "G1/S transition of mitotic cell cycle"
evidence=TAS] [GO:0000084 "S phase of mitotic cell cycle"
evidence=TAS] [GO:0000209 "protein polyubiquitination"
evidence=TAS] [GO:0000216 "M/G1 transition of mitotic cell cycle"
evidence=TAS] [GO:0000278 "mitotic cell cycle" evidence=TAS]
[GO:0002474 "antigen processing and presentation of peptide antigen
via MHC class I" evidence=TAS] [GO:0002479 "antigen processing and
presentation of exogenous peptide antigen via MHC class I,
TAP-dependent" evidence=TAS] [GO:0005654 "nucleoplasm"
evidence=TAS] [GO:0005829 "cytosol" evidence=TAS] [GO:0006521
"regulation of cellular amino acid metabolic process" evidence=TAS]
[GO:0006915 "apoptotic process" evidence=TAS] [GO:0006977 "DNA
damage response, signal transduction by p53 class mediator
resulting in cell cycle arrest" evidence=TAS] [GO:0010467 "gene
expression" evidence=TAS] [GO:0016032 "viral reproduction"
evidence=TAS] [GO:0016070 "RNA metabolic process" evidence=TAS]
[GO:0016071 "mRNA metabolic process" evidence=TAS] [GO:0031145
"anaphase-promoting complex-dependent proteasomal
ubiquitin-dependent protein catabolic process" evidence=TAS]
[GO:0034641 "cellular nitrogen compound metabolic process"
evidence=TAS] [GO:0042590 "antigen processing and presentation of
exogenous peptide antigen via MHC class I" evidence=TAS]
[GO:0042981 "regulation of apoptotic process" evidence=TAS]
[GO:0044281 "small molecule metabolic process" evidence=TAS]
[GO:0051436 "negative regulation of ubiquitin-protein ligase
activity involved in mitotic cell cycle" evidence=TAS] [GO:0051437
"positive regulation of ubiquitin-protein ligase activity involved
in mitotic cell cycle" evidence=TAS] [GO:0051439 "regulation of
ubiquitin-protein ligase activity involved in mitotic cell cycle"
evidence=TAS] [GO:0005515 "protein binding" evidence=IPI]
[GO:0006200 "ATP catabolic process" evidence=ISS] [GO:0005634
"nucleus" evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA]
[GO:0005737 "cytoplasm" evidence=IDA] Reactome:REACT_13505
Reactome:REACT_578 Reactome:REACT_71 Reactome:REACT_21257
Reactome:REACT_6850 Reactome:REACT_111217 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005829
GO:GO:0005524 Reactome:REACT_111102 Reactome:REACT_116125
Reactome:REACT_6900 GO:GO:0006915 GO:GO:0010467 GO:GO:0016071
Reactome:REACT_115566 GO:GO:0005654 GO:GO:0002479 GO:GO:0016032
Reactome:REACT_21300 GO:GO:0006977 GO:GO:0042981 GO:GO:0000082
GO:GO:0016887 GO:GO:0051436 GO:GO:0000216 GO:GO:0000209
GO:GO:0000084 GO:GO:0031145 GO:GO:0051437 GO:GO:0006521
Reactome:REACT_383 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOVERGEN:HBG000109 GO:GO:0022624 HOGENOM:HOG000225143 KO:K03062
OMA:FIRNQER CTD:5700 OrthoDB:EOG4D7Z5Q EMBL:L02426 EMBL:CR457044
EMBL:BC000512 EMBL:BC016368 EMBL:BC073818 IPI:IPI00011126
PIR:A44468 RefSeq:NP_002793.2 UniGene:Hs.356654
ProteinModelPortal:P62191 SMR:P62191 IntAct:P62191
MINT:MINT-1141832 STRING:P62191 PhosphoSite:P62191 DMDM:49065817
PaxDb:P62191 PeptideAtlas:P62191 PRIDE:P62191 DNASU:5700
Ensembl:ENST00000261303 GeneID:5700 KEGG:hsa:5700 UCSC:uc001xyf.3
GeneCards:GC14P090722 H-InvDB:HIX0030744 HGNC:HGNC:9547
HPA:HPA000872 MIM:602706 neXtProt:NX_P62191 PharmGKB:PA33892
InParanoid:P62191 PhylomeDB:P62191 GenomeRNAi:5700 NextBio:22146
ArrayExpress:P62191 Bgee:P62191 CleanEx:HS_PSMC1
Genevestigator:P62191 GermOnline:ENSG00000100764 Uniprot:P62191
Length = 440
Score = 443 (161.0 bits), Expect = 2.9e-42, Sum P(2) = 2.9e-42
Identities = 97/244 (39%), Positives = 141/244 (57%)
Query: 377 SFDDIGGLSEYIDALKEMVFFPLLYPDFFASYHITPPRGVLLCGPPGTGKTLIARALACA 436
++ DIGGL I +KE V PL +P+++ I PP+GV+L GPPGTGKTL+A+A+A
Sbjct: 183 TYADIGGLDNQIQEIKESVELPLTHPEYYEEMGIKPPKGVILYGPPGTGKTLLAKAVANQ 242
Query: 437 ASKAGQKVSFYMRKGADVLSKWVGEAERQLKLLFEEAQRNQPSIIFFDEIDGLAPVRSSK 496
S +F G++++ K++G+ + ++ LF A+ + PSI+F DEID + R
Sbjct: 243 TS-----ATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAIGTKRYDS 297
Query: 497 QEQIHNSIVSTLLALM---DGLDSRGQVVLIGATNRVDAIDGALRRPGRFDREFNFPLPG 553
I T+L L+ DG DSRG V +I ATNR++ +D AL RPGR DR+ FPLP
Sbjct: 298 NSGGEREIQRTMLELLNQLDGFDSRGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPD 357
Query: 554 CEARAEILDIHTRKWKQPPSRELKSELAASCVGYCGADLKALCTEAAIRAFREKYPQVYT 613
+ + I IHT + L +L + GAD+KA+CTEA + A RE+ +V
Sbjct: 358 EKTKKRIFQIHTSRMTLADDVTL-DDLIMAKDDLSGADIKAICTEAGLMALRERRMKVTN 416
Query: 614 SDDK 617
D K
Sbjct: 417 EDFK 420
Score = 39 (18.8 bits), Expect = 2.9e-42, Sum P(2) = 2.9e-42
Identities = 15/55 (27%), Positives = 20/55 (36%)
Query: 89 SVNLEDYTDSSGSEDEDLMRPSYRPLRNRMRN---NMSQDELSPSKRKKVVEAKP 140
SV E Y D+DL+ P L N + + D+ P VE P
Sbjct: 126 SVGSEHYVSILSFVDKDLLEPGCSVLLNHKVHAVIGVLMDDTDPLVTVMKVEKAP 180
>UNIPROTKB|F2Z5J1 [details] [associations]
symbol:PSMC1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0022624 "proteasome accessory complex" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 TIGRFAMs:TIGR01242 KO:K03062 OMA:FIRNQER
GeneTree:ENSGT00550000074818 CTD:5700 EMBL:CT737375
RefSeq:NP_001231080.1 UniGene:Ssc.1911 ProteinModelPortal:F2Z5J1
SMR:F2Z5J1 PRIDE:F2Z5J1 Ensembl:ENSSSCT00000002703 GeneID:100155274
KEGG:ssc:100155274 Uniprot:F2Z5J1
Length = 440
Score = 443 (161.0 bits), Expect = 2.9e-42, Sum P(2) = 2.9e-42
Identities = 97/244 (39%), Positives = 141/244 (57%)
Query: 377 SFDDIGGLSEYIDALKEMVFFPLLYPDFFASYHITPPRGVLLCGPPGTGKTLIARALACA 436
++ DIGGL I +KE V PL +P+++ I PP+GV+L GPPGTGKTL+A+A+A
Sbjct: 183 TYADIGGLDNQIQEIKESVELPLTHPEYYEEMGIKPPKGVILYGPPGTGKTLLAKAVANQ 242
Query: 437 ASKAGQKVSFYMRKGADVLSKWVGEAERQLKLLFEEAQRNQPSIIFFDEIDGLAPVRSSK 496
S +F G++++ K++G+ + ++ LF A+ + PSI+F DEID + R
Sbjct: 243 TS-----ATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAIGTKRYDS 297
Query: 497 QEQIHNSIVSTLLALM---DGLDSRGQVVLIGATNRVDAIDGALRRPGRFDREFNFPLPG 553
I T+L L+ DG DSRG V +I ATNR++ +D AL RPGR DR+ FPLP
Sbjct: 298 NSGGEREIQRTMLELLNQLDGFDSRGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPD 357
Query: 554 CEARAEILDIHTRKWKQPPSRELKSELAASCVGYCGADLKALCTEAAIRAFREKYPQVYT 613
+ + I IHT + L +L + GAD+KA+CTEA + A RE+ +V
Sbjct: 358 EKTKKRIFQIHTSRMTLADDVTL-DDLIMAKDDLSGADIKAICTEAGLMALRERRMKVTN 416
Query: 614 SDDK 617
D K
Sbjct: 417 EDFK 420
Score = 39 (18.8 bits), Expect = 2.9e-42, Sum P(2) = 2.9e-42
Identities = 15/55 (27%), Positives = 20/55 (36%)
Query: 89 SVNLEDYTDSSGSEDEDLMRPSYRPLRNRMRN---NMSQDELSPSKRKKVVEAKP 140
SV E Y D+DL+ P L N + + D+ P VE P
Sbjct: 126 SVGSEHYVSILSFVDKDLLEPGCSVLLNHKVHAVIGVLMDDTDPLVTVMKVEKAP 180
>MGI|MGI:106054 [details] [associations]
symbol:Psmc1 "protease (prosome, macropain) 26S subunit,
ATPase 1" species:10090 "Mus musculus" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0000502 "proteasome complex"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISO] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0017025
"TBP-class protein binding" evidence=ISO] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0022624
"proteasome accessory complex" evidence=IDA] [GO:0030163 "protein
catabolic process" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 MGI:MGI:106054
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 eggNOG:COG1222 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109
GO:GO:0022624 HOGENOM:HOG000225143 KO:K03062 OMA:FIRNQER CTD:5700
OrthoDB:EOG4D7Z5Q EMBL:U39302 EMBL:BC003860 IPI:IPI00133428
RefSeq:NP_032973.1 UniGene:Mm.157105 ProteinModelPortal:P62192
SMR:P62192 IntAct:P62192 STRING:P62192 PhosphoSite:P62192
REPRODUCTION-2DPAGE:IPI00133428 PaxDb:P62192 PRIDE:P62192
Ensembl:ENSMUST00000021595 GeneID:19179 KEGG:mmu:19179
InParanoid:P62192 NextBio:295866 Bgee:P62192 Genevestigator:P62192
GermOnline:ENSMUSG00000021178 Uniprot:P62192
Length = 440
Score = 443 (161.0 bits), Expect = 2.9e-42, Sum P(2) = 2.9e-42
Identities = 97/244 (39%), Positives = 141/244 (57%)
Query: 377 SFDDIGGLSEYIDALKEMVFFPLLYPDFFASYHITPPRGVLLCGPPGTGKTLIARALACA 436
++ DIGGL I +KE V PL +P+++ I PP+GV+L GPPGTGKTL+A+A+A
Sbjct: 183 TYADIGGLDNQIQEIKESVELPLTHPEYYEEMGIKPPKGVILYGPPGTGKTLLAKAVANQ 242
Query: 437 ASKAGQKVSFYMRKGADVLSKWVGEAERQLKLLFEEAQRNQPSIIFFDEIDGLAPVRSSK 496
S +F G++++ K++G+ + ++ LF A+ + PSI+F DEID + R
Sbjct: 243 TS-----ATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAIGTKRYDS 297
Query: 497 QEQIHNSIVSTLLALM---DGLDSRGQVVLIGATNRVDAIDGALRRPGRFDREFNFPLPG 553
I T+L L+ DG DSRG V +I ATNR++ +D AL RPGR DR+ FPLP
Sbjct: 298 NSGGEREIQRTMLELLNQLDGFDSRGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPD 357
Query: 554 CEARAEILDIHTRKWKQPPSRELKSELAASCVGYCGADLKALCTEAAIRAFREKYPQVYT 613
+ + I IHT + L +L + GAD+KA+CTEA + A RE+ +V
Sbjct: 358 EKTKKRIFQIHTSRMTLADDVTL-DDLIMAKDDLSGADIKAICTEAGLMALRERRMKVTN 416
Query: 614 SDDK 617
D K
Sbjct: 417 EDFK 420
Score = 39 (18.8 bits), Expect = 2.9e-42, Sum P(2) = 2.9e-42
Identities = 15/55 (27%), Positives = 20/55 (36%)
Query: 89 SVNLEDYTDSSGSEDEDLMRPSYRPLRNRMRN---NMSQDELSPSKRKKVVEAKP 140
SV E Y D+DL+ P L N + + D+ P VE P
Sbjct: 126 SVGSEHYVSILSFVDKDLLEPGCSVLLNHKVHAVIGVLMDDTDPLVTVMKVEKAP 180
>RGD|621097 [details] [associations]
symbol:Psmc1 "proteasome (prosome, macropain) 26S subunit,
ATPase, 1" species:10116 "Rattus norvegicus" [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005575 "cellular_component"
evidence=ND] [GO:0005634 "nucleus" evidence=ISO;IDA] [GO:0005737
"cytoplasm" evidence=IEA;ISO] [GO:0006200 "ATP catabolic process"
evidence=TAS] [GO:0008150 "biological_process" evidence=ND]
[GO:0016887 "ATPase activity" evidence=TAS] [GO:0017025 "TBP-class
protein binding" evidence=IPI] [GO:0022624 "proteasome accessory
complex" evidence=ISO;ISS] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0005730 "nucleolus" evidence=ISO]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
RGD:621097 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0016887
GO:GO:0030163 eggNOG:COG1222 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109
GO:GO:0022624 HOGENOM:HOG000225143 KO:K03062
GeneTree:ENSGT00550000074818 CTD:5700 OrthoDB:EOG4D7Z5Q EMBL:D50696
EMBL:BC063157 IPI:IPI00211733 RefSeq:NP_476464.1 UniGene:Rn.10526
ProteinModelPortal:P62193 SMR:P62193 IntAct:P62193 STRING:P62193
PRIDE:P62193 Ensembl:ENSRNOT00000005329 GeneID:117263
KEGG:rno:117263 UCSC:RGD:621097 InParanoid:P62193 NextBio:620148
Genevestigator:P62193 GermOnline:ENSRNOG00000003951 Uniprot:P62193
Length = 440
Score = 443 (161.0 bits), Expect = 2.9e-42, Sum P(2) = 2.9e-42
Identities = 97/244 (39%), Positives = 141/244 (57%)
Query: 377 SFDDIGGLSEYIDALKEMVFFPLLYPDFFASYHITPPRGVLLCGPPGTGKTLIARALACA 436
++ DIGGL I +KE V PL +P+++ I PP+GV+L GPPGTGKTL+A+A+A
Sbjct: 183 TYADIGGLDNQIQEIKESVELPLTHPEYYEEMGIKPPKGVILYGPPGTGKTLLAKAVANQ 242
Query: 437 ASKAGQKVSFYMRKGADVLSKWVGEAERQLKLLFEEAQRNQPSIIFFDEIDGLAPVRSSK 496
S +F G++++ K++G+ + ++ LF A+ + PSI+F DEID + R
Sbjct: 243 TS-----ATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAIGTKRYDS 297
Query: 497 QEQIHNSIVSTLLALM---DGLDSRGQVVLIGATNRVDAIDGALRRPGRFDREFNFPLPG 553
I T+L L+ DG DSRG V +I ATNR++ +D AL RPGR DR+ FPLP
Sbjct: 298 NSGGEREIQRTMLELLNQLDGFDSRGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPD 357
Query: 554 CEARAEILDIHTRKWKQPPSRELKSELAASCVGYCGADLKALCTEAAIRAFREKYPQVYT 613
+ + I IHT + L +L + GAD+KA+CTEA + A RE+ +V
Sbjct: 358 EKTKKRIFQIHTSRMTLADDVTL-DDLIMAKDDLSGADIKAICTEAGLMALRERRMKVTN 416
Query: 614 SDDK 617
D K
Sbjct: 417 EDFK 420
Score = 39 (18.8 bits), Expect = 2.9e-42, Sum P(2) = 2.9e-42
Identities = 15/55 (27%), Positives = 20/55 (36%)
Query: 89 SVNLEDYTDSSGSEDEDLMRPSYRPLRNRMRN---NMSQDELSPSKRKKVVEAKP 140
SV E Y D+DL+ P L N + + D+ P VE P
Sbjct: 126 SVGSEHYVSILSFVDKDLLEPGCSVLLNHKVHAVIGVLMDDTDPLVTVMKVEKAP 180
>RGD|3428 [details] [associations]
symbol:Psmc2 "proteasome (prosome, macropain) 26S subunit, ATPase
2" species:10116 "Rattus norvegicus" [GO:0000502 "proteasome complex"
evidence=ISO] [GO:0000932 "cytoplasmic mRNA processing body"
evidence=ISS] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA;ISO;IDA] [GO:0005737 "cytoplasm" evidence=ISO]
[GO:0005739 "mitochondrion" evidence=IEA;ISO] [GO:0006200 "ATP
catabolic process" evidence=ISO] [GO:0006511 "ubiquitin-dependent
protein catabolic process" evidence=IEA;ISO] [GO:0016887 "ATPase
activity" evidence=IEA;ISO] [GO:0017025 "TBP-class protein binding"
evidence=IPI] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0022624 "proteasome accessory complex"
evidence=IEA;ISO;ISS] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0005730 "nucleolus" evidence=ISO]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
RGD:3428 GO:GO:0005739 GO:GO:0005524 GO:GO:0005634 GO:GO:0016887
GO:GO:0006511 GO:GO:0000932 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOVERGEN:HBG000109 GO:GO:0022624 HOGENOM:HOG000225143 KO:K03061
CTD:5701 OrthoDB:EOG4RXZ05 EMBL:D50694 EMBL:BC061542 EMBL:U13895
IPI:IPI00421600 RefSeq:NP_150239.1 UniGene:Rn.1202
ProteinModelPortal:Q63347 IntAct:Q63347 MINT:MINT-1794034
STRING:Q63347 PhosphoSite:Q63347 PRIDE:Q63347 GeneID:25581
KEGG:rno:25581 InParanoid:Q63347 NextBio:607227 Genevestigator:Q63347
GermOnline:ENSRNOG00000012026 Uniprot:Q63347
Length = 433
Score = 456 (165.6 bits), Expect = 3.0e-42, P = 3.0e-42
Identities = 108/267 (40%), Positives = 155/267 (58%)
Query: 370 LQVDES--VSFDDIGGLSEYIDALKEMVFFPLLYPDFFASYHITPPRGVLLCGPPGTGKT 427
+QV+E V++ D+GG E I+ L+E+V PLL+P+ F + I PP+GVLL GPPGTGKT
Sbjct: 164 MQVEEKPDVTYSDVGGCKEQIEKLREVVETPLLHPERFVNLGIEPPKGVLLFGPPGTGKT 223
Query: 428 LIARALACAASKAGQKVSFYMRKGADVLSKWVGEAERQLKLLFEEAQRNQPSIIFFDEID 487
L ARA+A F G++++ K+VGE R ++ LFE A+ + +IFFDEID
Sbjct: 224 LCARAVANRTDAC-----FIPVIGSELVQKYVGEGARMVRELFEMARTKKACLIFFDEID 278
Query: 488 GLAPVRSSKQEQIHNSIVSTLLAL---MDGLDSRGQVVLIGATNRVDAIDGALRRPGRFD 544
+ R N + T+L L +DG D RG + ++ ATNR D +D AL RPGR D
Sbjct: 279 AIGGARFDDGAGGDNEVQRTMLELINQLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLD 338
Query: 545 REFNFPLPGCEARAEILDIHTRKWKQPPSRELKSELAAS-CVGYCGADLKALCTEAAIRA 603
R+ F LP E R I IH R R+++ EL A C GA+++++CTEA + A
Sbjct: 339 RKIEFSLPDLEGRTHIFKIHARSMSV--ERDIRFELLARLCPNSTGAEIRSVCTEAGMFA 396
Query: 604 FREKYPQVYTSDDKFLIDVDSVTVEKY 630
R + ++ T D FL V+ V ++ Y
Sbjct: 397 IRARR-KIATEKD-FLEAVNKV-IKSY 420
>UNIPROTKB|Q63347 [details] [associations]
symbol:Psmc2 "26S protease regulatory subunit 7"
species:10116 "Rattus norvegicus" [GO:0005524 "ATP binding"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 RGD:3428 GO:GO:0005739 GO:GO:0005524 GO:GO:0005634
GO:GO:0016887 GO:GO:0006511 GO:GO:0000932 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 GO:GO:0022624
HOGENOM:HOG000225143 KO:K03061 CTD:5701 OrthoDB:EOG4RXZ05
EMBL:D50694 EMBL:BC061542 EMBL:U13895 IPI:IPI00421600
RefSeq:NP_150239.1 UniGene:Rn.1202 ProteinModelPortal:Q63347
IntAct:Q63347 MINT:MINT-1794034 STRING:Q63347 PhosphoSite:Q63347
PRIDE:Q63347 GeneID:25581 KEGG:rno:25581 InParanoid:Q63347
NextBio:607227 Genevestigator:Q63347 GermOnline:ENSRNOG00000012026
Uniprot:Q63347
Length = 433
Score = 456 (165.6 bits), Expect = 3.0e-42, P = 3.0e-42
Identities = 108/267 (40%), Positives = 155/267 (58%)
Query: 370 LQVDES--VSFDDIGGLSEYIDALKEMVFFPLLYPDFFASYHITPPRGVLLCGPPGTGKT 427
+QV+E V++ D+GG E I+ L+E+V PLL+P+ F + I PP+GVLL GPPGTGKT
Sbjct: 164 MQVEEKPDVTYSDVGGCKEQIEKLREVVETPLLHPERFVNLGIEPPKGVLLFGPPGTGKT 223
Query: 428 LIARALACAASKAGQKVSFYMRKGADVLSKWVGEAERQLKLLFEEAQRNQPSIIFFDEID 487
L ARA+A F G++++ K+VGE R ++ LFE A+ + +IFFDEID
Sbjct: 224 LCARAVANRTDAC-----FIPVIGSELVQKYVGEGARMVRELFEMARTKKACLIFFDEID 278
Query: 488 GLAPVRSSKQEQIHNSIVSTLLAL---MDGLDSRGQVVLIGATNRVDAIDGALRRPGRFD 544
+ R N + T+L L +DG D RG + ++ ATNR D +D AL RPGR D
Sbjct: 279 AIGGARFDDGAGGDNEVQRTMLELINQLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLD 338
Query: 545 REFNFPLPGCEARAEILDIHTRKWKQPPSRELKSELAAS-CVGYCGADLKALCTEAAIRA 603
R+ F LP E R I IH R R+++ EL A C GA+++++CTEA + A
Sbjct: 339 RKIEFSLPDLEGRTHIFKIHARSMSV--ERDIRFELLARLCPNSTGAEIRSVCTEAGMFA 396
Query: 604 FREKYPQVYTSDDKFLIDVDSVTVEKY 630
R + ++ T D FL V+ V ++ Y
Sbjct: 397 IRARR-KIATEKD-FLEAVNKV-IKSY 420
>FB|FBgn0028687 [details] [associations]
symbol:Rpt1 "Regulatory particle triple-A ATPase 1"
species:7227 "Drosophila melanogaster" [GO:0008540 "proteasome
regulatory particle, base subcomplex" evidence=ISS;NAS] [GO:0006508
"proteolysis" evidence=ISS;IDA] [GO:0004175 "endopeptidase
activity" evidence=IDA] [GO:0005838 "proteasome regulatory
particle" evidence=ISS;IDA] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0009987 "cellular process"
evidence=IMP] [GO:0006974 "response to DNA damage stimulus"
evidence=IMP] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 EMBL:AE013599 GO:GO:0005524 GO:GO:0005737
GO:GO:0006508 GO:GO:0006974 GO:GO:0016887 GO:GO:0004175
GO:GO:0030163 eggNOG:COG1222 TIGRFAMs:TIGR01242 GO:GO:0008540
KO:K03061 OMA:DIRWELI GeneTree:ENSGT00550000074978 HSSP:Q9LCZ4
EMBL:AF145307 EMBL:AY061606 RefSeq:NP_477473.1 UniGene:Dm.3425
SMR:Q7KMQ0 IntAct:Q7KMQ0 STRING:Q7KMQ0 EnsemblMetazoa:FBtr0088947
GeneID:35701 KEGG:dme:Dmel_CG1341 UCSC:CG1341-RA CTD:35701
FlyBase:FBgn0028687 HOGENOM:HOG000237377 InParanoid:Q7KMQ0
OrthoDB:EOG4X3FGQ GenomeRNAi:35701 NextBio:794815 Uniprot:Q7KMQ0
Length = 433
Score = 444 (161.4 bits), Expect = 3.7e-42, Sum P(2) = 3.7e-42
Identities = 106/267 (39%), Positives = 156/267 (58%)
Query: 370 LQVDES--VSFDDIGGLSEYIDALKEMVFFPLLYPDFFASYHITPPRGVLLCGPPGTGKT 427
+QV++ V++ D+GG E I+ L+E+V PLL+P+ F + I PP+GVLL GPPGTGKT
Sbjct: 164 MQVEDKPDVTYSDVGGCKEQIEKLREVVETPLLHPEKFVNLGIEPPKGVLLFGPPGTGKT 223
Query: 428 LIARALACAASKAGQKVSFYMRKGADVLSKWVGEAERQLKLLFEEAQRNQPSIIFFDEID 487
L ARA+A +V G++++ K+VGE R ++ LFE A+ + +IFFDEID
Sbjct: 224 LCARAVANRTDACFIRVI-----GSELVQKYVGEGARMVRELFEMARSKKACLIFFDEID 278
Query: 488 GLAPVRSSKQEQIHNSIVSTLLAL---MDGLDSRGQVVLIGATNRVDAIDGALRRPGRFD 544
+ R N + T+L L +DG D RG + ++ ATNR D +D AL RPGR D
Sbjct: 279 AIGGARFDDGAGGDNEVQRTMLELINQLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLD 338
Query: 545 REFNFPLPGCEARAEILDIHTRKWKQPPSRELKSELAAS-CVGYCGADLKALCTEAAIRA 603
R+ F LP + R+ I IH R R+++ +L A C GA+++++CTEA + A
Sbjct: 339 RKVEFGLPDQDGRSHIFKIHARSMSV--ERDIRFDLLARLCPNSTGAEIRSVCTEAGMFA 396
Query: 604 FREKYPQVYTSDDKFLIDVDSVTVEKY 630
R + +V T D FL V V ++ Y
Sbjct: 397 IRARR-KVATEKD-FLEAVKKV-IKSY 420
Score = 37 (18.1 bits), Expect = 3.7e-42, Sum P(2) = 3.7e-42
Identities = 10/32 (31%), Positives = 15/32 (46%)
Query: 166 DEQGSSEEKVGQDETENGNESDNDADDGQNEI 197
D G + KV DE E+ + D+G E+
Sbjct: 3 DYLGDDQRKVKHDEKED--KEIKSLDEGDIEL 32
>WB|WBGene00004502 [details] [associations]
symbol:rpt-2 species:6239 "Caenorhabditis elegans"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0009792 "embryo development
ending in birth or egg hatching" evidence=IMP] [GO:0000003
"reproduction" evidence=IMP] [GO:0008340 "determination of adult
lifespan" evidence=IMP] [GO:0031625 "ubiquitin protein ligase
binding" evidence=IPI] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0008340
GO:GO:0009792 GO:GO:0005737 GO:GO:0000003 GO:GO:0030163
GO:GO:0000502 GO:GO:0017111 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 KO:K03062 OMA:FIRNQER EMBL:FO080494 PIR:T31800
RefSeq:NP_504558.1 ProteinModelPortal:O16368 SMR:O16368
IntAct:O16368 MINT:MINT-210699 STRING:O16368 PaxDb:O16368
PRIDE:O16368 EnsemblMetazoa:F29G9.5.1 EnsemblMetazoa:F29G9.5.2
GeneID:178988 KEGG:cel:CELE_F29G9.5 UCSC:F29G9.5 CTD:178988
WormBase:F29G9.5 GeneTree:ENSGT00550000074818 InParanoid:O16368
NextBio:903424 Uniprot:O16368
Length = 443
Score = 437 (158.9 bits), Expect = 1.3e-41, Sum P(2) = 1.3e-41
Identities = 95/252 (37%), Positives = 144/252 (57%)
Query: 367 IQPLQVDESVSFDDIGGLSEYIDALKEMVFFPLLYPDFFASYHITPPRGVLLCGPPGTGK 426
+ L+ ++ D+GGL + I +KE V PL +P+++ I PP+GV+L G PGTGK
Sbjct: 176 VMKLEKAPQETYADVGGLDQQIQEIKEAVELPLTHPEYYEEMGIRPPKGVILYGCPGTGK 235
Query: 427 TLIARALACAASKAGQKVSFYMRKGADVLSKWVGEAERQLKLLFEEAQRNQPSIIFFDEI 486
TL+A+A+A S +F G++++ K++G+ + ++ LF A+ N PSI+F DEI
Sbjct: 236 TLLAKAVANQTS-----ATFLRIVGSELIQKYLGDGPKMVRELFRVAEENAPSIVFIDEI 290
Query: 487 DGLAPVRSSKQEQIHNSIVSTLLALM---DGLDSRGQVVLIGATNRVDAIDGALRRPGRF 543
D + R I T+L L+ DG DSRG V ++ ATNR++++D AL RPGR
Sbjct: 291 DAVGTKRYDSNSGGEREIQRTMLELLNQLDGFDSRGDVKVLMATNRIESLDPALIRPGRI 350
Query: 544 DREFNFPLPGCEARAEILDIHTRKWKQPPSRELKSELAASCVGYCGADLKALCTEAAIRA 603
DR+ FPLP + + I IHT + L+ + A GAD+KA+CTEA + A
Sbjct: 351 DRKIEFPLPDEKTKRRIFQIHTSRMTLGKEVNLEEFITAKDE-LSGADIKAMCTEAGLLA 409
Query: 604 FREKYPQVYTSD 615
RE+ +V D
Sbjct: 410 LRERRMRVTMED 421
Score = 39 (18.8 bits), Expect = 1.3e-41, Sum P(2) = 1.3e-41
Identities = 13/45 (28%), Positives = 21/45 (46%)
Query: 102 EDEDLMRPSYRPLRNRMRNNMSQDELSPSKRKKVVEAKPTPRREG 146
+D LM + + R++ Q+E +R KV E + TP G
Sbjct: 72 KDYLLMEQEFIQNQERLK---PQEERQEEERAKVDELRGTPMAVG 113
>POMBASE|SPBC23G7.12c [details] [associations]
symbol:rpt6 "19S proteasome regulatory subunit Rpt6
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0004175
"endopeptidase activity" evidence=ISO] [GO:0005524 "ATP binding"
evidence=ISM] [GO:0005634 "nucleus" evidence=IDA] [GO:0005635
"nuclear envelope" evidence=IDA] [GO:0005829 "cytosol"
evidence=IDA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=ISO] [GO:0007346 "regulation of mitotic cell
cycle" evidence=IC] [GO:0008540 "proteasome regulatory particle,
base subcomplex" evidence=ISO] [GO:0016887 "ATPase activity"
evidence=ISO] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 PomBase:SPBC23G7.12c GO:GO:0005829 GO:GO:0005524
GO:GO:0007346 GO:GO:0005635 EMBL:CU329671 GenomeReviews:CU329671_GR
GO:GO:0016887 GO:GO:0004175 GO:GO:0006511 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 GO:GO:0008540 KO:K03066
OMA:TEILRIH EMBL:U02280 PIR:S45176 RefSeq:NP_595870.1
ProteinModelPortal:P41836 IntAct:P41836 STRING:P41836 PRIDE:P41836
EnsemblFungi:SPBC23G7.12c.1 GeneID:2540487 KEGG:spo:SPBC23G7.12c
OrthoDB:EOG44N21J NextBio:20801614 Uniprot:P41836
Length = 403
Score = 450 (163.5 bits), Expect = 1.3e-41, P = 1.3e-41
Identities = 104/253 (41%), Positives = 153/253 (60%)
Query: 377 SFDDIGGLSEYIDALKEMVFFPLLYPDFFASYHITPPRGVLLCGPPGTGKTLIARALACA 436
+++ +GGL + I +KE++ P+ +P+ F S I P+G+LL GPPGTGKTL+ARA+A
Sbjct: 143 TYEMVGGLEKQIKEIKEVIELPVKHPELFESLGIPQPKGILLYGPPGTGKTLLARAVAHH 202
Query: 437 ASKAGQKVSFYMRKGADVLSKWVGEAERQLKLLFEEAQRNQPSIIFFDEIDGLAPVRSSK 496
+VS G++++ K++GE R ++ LF A+ + PSIIF DEID + RS
Sbjct: 203 TDCKFIRVS-----GSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSSRSDS 257
Query: 497 QEQIHNSIVS-TLLALM---DGLDSRGQVVLIGATNRVDAIDGALRRPGRFDREFNFPLP 552
+S V T+L L+ DG ++ + +I ATNR+D +D AL RPGR DR+ FP P
Sbjct: 258 SGGSGDSEVQRTMLELLNQLDGFEATKNIKVIMATNRIDILDPALLRPGRIDRKIEFPPP 317
Query: 553 GCEARAEILDIHTRKWKQPPSRELKSELAASCVGYCGADLKALCTEAAIRAFREKYPQVY 612
EARAEIL IH+R +LKS +A G GA+LK +CTEA + A RE+ +V+
Sbjct: 318 SAEARAEILRIHSRSMNLTRGIDLKS-IAEKMNGASGAELKGVCTEAGMFALRER--RVH 374
Query: 613 TSDDKFLIDVDSV 625
+ + F + V V
Sbjct: 375 VTQEDFELAVAKV 387
>TAIR|locus:2024822 [details] [associations]
symbol:RPT1A "regulatory particle triple-A 1A"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM;TAS] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=IGI;ISS] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=TAS]
[GO:0005886 "plasma membrane" evidence=IDA] [GO:0000502 "proteasome
complex" evidence=IDA] [GO:0005829 "cytosol" evidence=IDA]
[GO:0008540 "proteasome regulatory particle, base subcomplex"
evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005829
GO:GO:0005886 GO:GO:0005524 GO:GO:0005634 GO:GO:0030163
GO:GO:0000502 GO:GO:0017111 EMBL:AC009324 EMBL:AC024260
eggNOG:COG1222 TIGRFAMs:TIGR01242 HOGENOM:HOG000225143
EMBL:AF123390 EMBL:AY062860 EMBL:BT000069 IPI:IPI00548766
PIR:G96577 RefSeq:NP_175778.1 UniGene:At.66918
ProteinModelPortal:Q9SSB5 SMR:Q9SSB5 IntAct:Q9SSB5 STRING:Q9SSB5
PaxDb:Q9SSB5 PRIDE:Q9SSB5 EnsemblPlants:AT1G53750.1 GeneID:841812
KEGG:ath:AT1G53750 GeneFarm:2748 TAIR:At1g53750 InParanoid:Q9SSB5
KO:K03061 OMA:DIRWELI PhylomeDB:Q9SSB5 ProtClustDB:CLSN2682130
Genevestigator:Q9SSB5 GermOnline:AT1G53750 Uniprot:Q9SSB5
Length = 426
Score = 450 (163.5 bits), Expect = 1.3e-41, P = 1.3e-41
Identities = 104/272 (38%), Positives = 158/272 (58%)
Query: 370 LQVDES--VSFDDIGGLSEYIDALKEMVFFPLLYPDFFASYHITPPRGVLLCGPPGTGKT 427
+ V+E V+++D+GG E I+ ++E+V P+L+P+ F I PP+GVL GPPGTGKT
Sbjct: 157 MTVEEKPDVTYNDVGGCKEQIEKMREVVELPMLHPEKFVKLGIDPPKGVLCYGPPGTGKT 216
Query: 428 LIARALACAASKAGQKVSFYMRKGADVLSKWVGEAERQLKLLFEEAQRNQPSIIFFDEID 487
L+ARA+A +V G++++ K+VGE R ++ LF+ A+ + I+FFDE+D
Sbjct: 217 LLARAVANRTDACFIRVI-----GSELVQKYVGEGARMVRELFQMARSKKACIVFFDEVD 271
Query: 488 GLAPVRSSKQEQIHNSIVSTLLAL---MDGLDSRGQVVLIGATNRVDAIDGALRRPGRFD 544
+ R N + T+L + +DG D+RG + ++ ATNR D +D AL RPGR D
Sbjct: 272 AIGGARFDDGVGGDNEVQRTMLEIVNQLDGFDARGNIKVLMATNRPDTLDPALLRPGRLD 331
Query: 545 REFNFPLPGCEARAEILDIHTRKWKQPPSRELKSELAAS-CVGYCGADLKALCTEAAIRA 603
R+ F LP E+R +I IHTR R+++ EL A C GAD++++CTEA + A
Sbjct: 332 RKVEFGLPDLESRTQIFKIHTRTMNC--ERDIRFELLARLCPNSTGADIRSVCTEAGMYA 389
Query: 604 FREKYPQVYTSDDKFLIDVDSVTVEKYHFIEA 635
R + V D FL V+ V ++ Y A
Sbjct: 390 IRARRKTVTEKD--FLDAVNKV-IKGYQKFSA 418
>CGD|CAL0000102 [details] [associations]
symbol:RIX7 species:5476 "Candida albicans" [GO:0030448
"hyphal growth" evidence=IMP] [GO:0005730 "nucleolus" evidence=IEA]
[GO:0030687 "preribosome, large subunit precursor" evidence=IEA]
[GO:0000055 "ribosomal large subunit export from nucleus"
evidence=IEA] [GO:0042273 "ribosomal large subunit biogenesis"
evidence=IEA] [GO:0044011 "single-species biofilm formation on
inanimate substrate" evidence=IMP] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 CGD:CAL0000102 GO:GO:0005524 eggNOG:COG0464
GO:GO:0017111 GO:GO:0030448 GO:GO:0044011 EMBL:AACQ01000021
EMBL:AACQ01000022 KO:K14571 RefSeq:XP_720530.1 RefSeq:XP_720658.1
ProteinModelPortal:Q5AGG2 STRING:Q5AGG2 GeneID:3637615
GeneID:3637735 KEGG:cal:CaO19.11695 KEGG:cal:CaO19.4219
Uniprot:Q5AGG2
Length = 827
Score = 436 (158.5 bits), Expect = 1.6e-41, Sum P(3) = 1.6e-41
Identities = 112/275 (40%), Positives = 150/275 (54%)
Query: 341 GHQGDTLAALTSGIQTAGPSSKGGADIQPLQVDES---VSFDDIGGLSEYIDALKEMVFF 397
G Q DT L + A S+K Q ++D S + +GG+ L E++
Sbjct: 152 GQQADTTELLKGNKRKAKGSAKTQLKKQKRKIDYSTPNIDLSSLGGVESVTTQLLEIIGL 211
Query: 398 PLLYPDFFASYHITPPRGVLLCGPPGTGKTLIARALACAASKAGQ-KVSFYMRKGADVLS 456
P+L+P+ ++S + PPRGVLL GPPG GKT IA ALA G+ KV F V+S
Sbjct: 212 PILHPEIYSSTGVEPPRGVLLYGPPGCGKTTIANALA------GELKVPFINISAPSVVS 265
Query: 457 KWVGEAERQLKLLFEEAQRNQPSIIFFDEIDGLAPVRSS-KQEQIHNSIVSTLLALMDGL 515
GE+E++L+ +FEEA++ P +IF DEID + P R Q ++ IV+ LL LMD L
Sbjct: 266 GMSGESEKKLREIFEEAKQIAPCLIFMDEIDAITPKRDGGAQREMEKRIVAQLLTLMDEL 325
Query: 516 --DSRG--QVVLIGATNRVDAIDGALRRPGRFDREFNFPLPGCEARAEILDIHTRKWKQP 571
+ G VV+IGATNR D++D ALRR GRFDRE +P E R IL T+ K
Sbjct: 326 TLEKTGGKPVVVIGATNRPDSLDSALRRAGRFDREICLNVPNEEQRISILKAMTKNIKLE 385
Query: 572 PSRELK-SELAASCVGYCGADLKALCTEAAIRAFR 605
EL+ GY GADLK+L T A I A +
Sbjct: 386 NGEHFNYRELSKLTPGYVGADLKSLVTAAGISAIK 420
Score = 402 (146.6 bits), Expect = 1.4e-35, Sum P(2) = 1.4e-35
Identities = 106/306 (34%), Positives = 163/306 (53%)
Query: 347 LAALTSGIQTAGPSSKGGADIQPLQVDESVSFDDIGGLSEYIDALKEMVFFPLLYPDFFA 406
LA A PS + A + V++ ++G L + L + P+ P+ +
Sbjct: 490 LAITYQDFVNALPSVQPSAKREGFATIPDVTWQNVGALFKIRMELHMCIVQPIKKPELYL 549
Query: 407 SYHITPPRGVLLCGPPGTGKTLIARALACAASKAGQKVSFYMRKGADVLSKWVGEAERQL 466
I P GVL+ GPPG GKTL+A+A+A S+A +F KG ++L+K+VGE+E+ +
Sbjct: 550 KVGIAAPAGVLMWGPPGCGKTLLAKAVA-NESRA----NFISIKGPELLNKYVGESEKAV 604
Query: 467 KLLFEEAQRNQPSIIFFDEIDGLAPVRSSKQEQIHNSIVSTLLALMDGLDSRGQVVLIGA 526
+ +F+ A+ + P IIFFDE+D L P R + + + +V+TLL +DGL+ R V +IGA
Sbjct: 605 RQVFQRARASTPCIIFFDELDALVPRRDTSMSESSSRVVNTLLTELDGLNDRKGVFVIGA 664
Query: 527 TNRVDAIDGALRRPGRFDREFNFPLPGCEARAEILDIHTRKWKQP--PSRELKSELAAS- 583
TNR D ID A+ RPGR D+ LP E R EIL R P + +L + S
Sbjct: 665 TNRPDMIDPAMLRPGRLDKTLYIELPTPEERLEILKTLVRTSNSPLHANVDLNAISRDSR 724
Query: 584 CVGYCGADLKALCTEAAIRAFREKYPQ---VYTSDDK-FLIDV---DSVTVEKYHFIEAM 636
C + GADL +L EA + A ++++ Q + D F D D +++ F A+
Sbjct: 725 CGNFSGADLSSLVKEAGVWALKKRFFQNQKIQELDSSGFYEDSIGEDDISITAEDFDHAL 784
Query: 637 STITPA 642
S+I P+
Sbjct: 785 SSIRPS 790
Score = 64 (27.6 bits), Expect = 1.6e-41, Sum P(3) = 1.6e-41
Identities = 14/40 (35%), Positives = 22/40 (55%)
Query: 151 RSMVATRKQLNLDSGDEQGSSEEKVGQD-ETENGNESDND 189
+S+ A+ K + D +E G E +G + E EN E +ND
Sbjct: 78 KSIAASLKVIRQDETEEFGDRENGIGDESEAENDKECEND 117
Score = 62 (26.9 bits), Expect = 1.6e-41, Sum P(3) = 1.6e-41
Identities = 19/69 (27%), Positives = 35/69 (50%)
Query: 706 LLLCGSEGTGVDHLGPAILHELEKFPVHSLGLPALLSDPSAKTPEEALVHIFGEARRTTP 765
+L+ G G G L A+ +E + G P LL+ ++ E+A+ +F AR +TP
Sbjct: 559 VLMWGPPGCGKTLLAKAVANESRANFISIKG-PELLNKYVGES-EKAVRQVFQRARASTP 616
Query: 766 SILYIPQFN 774
I++ + +
Sbjct: 617 CIIFFDELD 625
Score = 38 (18.4 bits), Expect = 8.3e-39, Sum P(3) = 8.3e-39
Identities = 9/30 (30%), Positives = 17/30 (56%)
Query: 170 SSEEKVGQDETENGNESDN---DADDGQNE 196
+S + + QDETE + +N D + +N+
Sbjct: 82 ASLKVIRQDETEEFGDRENGIGDESEAEND 111
>UNIPROTKB|Q5AGG2 [details] [associations]
symbol:RIX7 "Putative uncharacterized protein"
species:237561 "Candida albicans SC5314" [GO:0030448 "hyphal
growth" evidence=IMP] [GO:0044011 "single-species biofilm formation
on inanimate substrate" evidence=IMP] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 CGD:CAL0000102 GO:GO:0005524 eggNOG:COG0464
GO:GO:0017111 GO:GO:0030448 GO:GO:0044011 EMBL:AACQ01000021
EMBL:AACQ01000022 KO:K14571 RefSeq:XP_720530.1 RefSeq:XP_720658.1
ProteinModelPortal:Q5AGG2 STRING:Q5AGG2 GeneID:3637615
GeneID:3637735 KEGG:cal:CaO19.11695 KEGG:cal:CaO19.4219
Uniprot:Q5AGG2
Length = 827
Score = 436 (158.5 bits), Expect = 1.6e-41, Sum P(3) = 1.6e-41
Identities = 112/275 (40%), Positives = 150/275 (54%)
Query: 341 GHQGDTLAALTSGIQTAGPSSKGGADIQPLQVDES---VSFDDIGGLSEYIDALKEMVFF 397
G Q DT L + A S+K Q ++D S + +GG+ L E++
Sbjct: 152 GQQADTTELLKGNKRKAKGSAKTQLKKQKRKIDYSTPNIDLSSLGGVESVTTQLLEIIGL 211
Query: 398 PLLYPDFFASYHITPPRGVLLCGPPGTGKTLIARALACAASKAGQ-KVSFYMRKGADVLS 456
P+L+P+ ++S + PPRGVLL GPPG GKT IA ALA G+ KV F V+S
Sbjct: 212 PILHPEIYSSTGVEPPRGVLLYGPPGCGKTTIANALA------GELKVPFINISAPSVVS 265
Query: 457 KWVGEAERQLKLLFEEAQRNQPSIIFFDEIDGLAPVRSS-KQEQIHNSIVSTLLALMDGL 515
GE+E++L+ +FEEA++ P +IF DEID + P R Q ++ IV+ LL LMD L
Sbjct: 266 GMSGESEKKLREIFEEAKQIAPCLIFMDEIDAITPKRDGGAQREMEKRIVAQLLTLMDEL 325
Query: 516 --DSRG--QVVLIGATNRVDAIDGALRRPGRFDREFNFPLPGCEARAEILDIHTRKWKQP 571
+ G VV+IGATNR D++D ALRR GRFDRE +P E R IL T+ K
Sbjct: 326 TLEKTGGKPVVVIGATNRPDSLDSALRRAGRFDREICLNVPNEEQRISILKAMTKNIKLE 385
Query: 572 PSRELK-SELAASCVGYCGADLKALCTEAAIRAFR 605
EL+ GY GADLK+L T A I A +
Sbjct: 386 NGEHFNYRELSKLTPGYVGADLKSLVTAAGISAIK 420
Score = 402 (146.6 bits), Expect = 1.4e-35, Sum P(2) = 1.4e-35
Identities = 106/306 (34%), Positives = 163/306 (53%)
Query: 347 LAALTSGIQTAGPSSKGGADIQPLQVDESVSFDDIGGLSEYIDALKEMVFFPLLYPDFFA 406
LA A PS + A + V++ ++G L + L + P+ P+ +
Sbjct: 490 LAITYQDFVNALPSVQPSAKREGFATIPDVTWQNVGALFKIRMELHMCIVQPIKKPELYL 549
Query: 407 SYHITPPRGVLLCGPPGTGKTLIARALACAASKAGQKVSFYMRKGADVLSKWVGEAERQL 466
I P GVL+ GPPG GKTL+A+A+A S+A +F KG ++L+K+VGE+E+ +
Sbjct: 550 KVGIAAPAGVLMWGPPGCGKTLLAKAVA-NESRA----NFISIKGPELLNKYVGESEKAV 604
Query: 467 KLLFEEAQRNQPSIIFFDEIDGLAPVRSSKQEQIHNSIVSTLLALMDGLDSRGQVVLIGA 526
+ +F+ A+ + P IIFFDE+D L P R + + + +V+TLL +DGL+ R V +IGA
Sbjct: 605 RQVFQRARASTPCIIFFDELDALVPRRDTSMSESSSRVVNTLLTELDGLNDRKGVFVIGA 664
Query: 527 TNRVDAIDGALRRPGRFDREFNFPLPGCEARAEILDIHTRKWKQP--PSRELKSELAAS- 583
TNR D ID A+ RPGR D+ LP E R EIL R P + +L + S
Sbjct: 665 TNRPDMIDPAMLRPGRLDKTLYIELPTPEERLEILKTLVRTSNSPLHANVDLNAISRDSR 724
Query: 584 CVGYCGADLKALCTEAAIRAFREKYPQ---VYTSDDK-FLIDV---DSVTVEKYHFIEAM 636
C + GADL +L EA + A ++++ Q + D F D D +++ F A+
Sbjct: 725 CGNFSGADLSSLVKEAGVWALKKRFFQNQKIQELDSSGFYEDSIGEDDISITAEDFDHAL 784
Query: 637 STITPA 642
S+I P+
Sbjct: 785 SSIRPS 790
Score = 64 (27.6 bits), Expect = 1.6e-41, Sum P(3) = 1.6e-41
Identities = 14/40 (35%), Positives = 22/40 (55%)
Query: 151 RSMVATRKQLNLDSGDEQGSSEEKVGQD-ETENGNESDND 189
+S+ A+ K + D +E G E +G + E EN E +ND
Sbjct: 78 KSIAASLKVIRQDETEEFGDRENGIGDESEAENDKECEND 117
Score = 62 (26.9 bits), Expect = 1.6e-41, Sum P(3) = 1.6e-41
Identities = 19/69 (27%), Positives = 35/69 (50%)
Query: 706 LLLCGSEGTGVDHLGPAILHELEKFPVHSLGLPALLSDPSAKTPEEALVHIFGEARRTTP 765
+L+ G G G L A+ +E + G P LL+ ++ E+A+ +F AR +TP
Sbjct: 559 VLMWGPPGCGKTLLAKAVANESRANFISIKG-PELLNKYVGES-EKAVRQVFQRARASTP 616
Query: 766 SILYIPQFN 774
I++ + +
Sbjct: 617 CIIFFDELD 625
Score = 38 (18.4 bits), Expect = 8.3e-39, Sum P(3) = 8.3e-39
Identities = 9/30 (30%), Positives = 17/30 (56%)
Query: 170 SSEEKVGQDETENGNESDN---DADDGQNE 196
+S + + QDETE + +N D + +N+
Sbjct: 82 ASLKVIRQDETEEFGDRENGIGDESEAEND 111
>ZFIN|ZDB-GENE-040625-69 [details] [associations]
symbol:psmc1b "proteasome (prosome, macropain) 26S
subunit, ATPase, 1b" species:7955 "Danio rerio" [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0000502 "proteasome complex"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 ZFIN:ZDB-GENE-040625-69 GO:GO:0005524 GO:GO:0005737
GO:GO:0030163 GO:GO:0000502 GO:GO:0017111 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 HOGENOM:HOG000225143
KO:K03062 GeneTree:ENSGT00550000074818 EMBL:AL935145 EMBL:BC071538
IPI:IPI00495318 RefSeq:NP_001002091.1 UniGene:Dr.1187 STRING:Q6IQ72
Ensembl:ENSDART00000063950 GeneID:415181 KEGG:dre:415181 CTD:415181
InParanoid:Q6IQ72 NextBio:20818851 Uniprot:Q6IQ72
Length = 440
Score = 436 (158.5 bits), Expect = 1.7e-41, Sum P(2) = 1.7e-41
Identities = 96/244 (39%), Positives = 140/244 (57%)
Query: 377 SFDDIGGLSEYIDALKEMVFFPLLYPDFFASYHITPPRGVLLCGPPGTGKTLIARALACA 436
++ DIGGL I +KE V PL +P+++ I PP+GV+L G PGTGKTL+A+A+A
Sbjct: 183 TYADIGGLDNQIQEIKESVELPLTHPEYYEEMGIKPPKGVILYGAPGTGKTLLAKAVANQ 242
Query: 437 ASKAGQKVSFYMRKGADVLSKWVGEAERQLKLLFEEAQRNQPSIIFFDEIDGLAPVRSSK 496
S +F G++++ K++G+ + ++ LF A+ + PSI+F DEID + R
Sbjct: 243 TS-----ATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAIGTKRYDS 297
Query: 497 QEQIHNSIVSTLLALM---DGLDSRGQVVLIGATNRVDAIDGALRRPGRFDREFNFPLPG 553
I T+L L+ DG DSRG V +I ATNR++ +D AL RPGR DR+ FPLP
Sbjct: 298 NSGGEREIQRTMLELLNQLDGFDSRGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPD 357
Query: 554 CEARAEILDIHTRKWKQPPSRELKSELAASCVGYCGADLKALCTEAAIRAFREKYPQVYT 613
+ + I IHT + L +L + GAD+KA+CTEA + A RE+ +V
Sbjct: 358 EKTKRRIFQIHTSRMTVAEDVSL-DDLILAKDDLSGADIKAICTEAGLMALRERRMKVTN 416
Query: 614 SDDK 617
D K
Sbjct: 417 EDFK 420
Score = 39 (18.8 bits), Expect = 1.7e-41, Sum P(2) = 1.7e-41
Identities = 10/22 (45%), Positives = 11/22 (50%)
Query: 131 KRKKVVEAKPTPRREGLRPRRS 152
K KK P P R G R R+S
Sbjct: 19 KDKKKKYEPPIPTRVGKRKRKS 40
Score = 39 (18.8 bits), Expect = 1.7e-41, Sum P(2) = 1.7e-41
Identities = 15/55 (27%), Positives = 20/55 (36%)
Query: 89 SVNLEDYTDSSGSEDEDLMRPSYRPLRNRMRN---NMSQDELSPSKRKKVVEAKP 140
SV E Y D+DL+ P L N + + D+ P VE P
Sbjct: 126 SVGSEHYVSILSFVDKDLLEPGCSVLLNHKVHAVIGVLMDDTDPLVTVMKVEKAP 180
>ZFIN|ZDB-GENE-030131-8730 [details] [associations]
symbol:psmc1a "proteasome (prosome, macropain) 26S
subunit, ATPase, 1a" species:7955 "Danio rerio" [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0000502 "proteasome complex"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 ZFIN:ZDB-GENE-030131-8730 GO:GO:0005524 GO:GO:0005737
GO:GO:0030163 GO:GO:0000502 GO:GO:0017111 HSSP:P43773
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 KO:K03062 EMBL:BC049471
IPI:IPI00500900 RefSeq:NP_956327.1 UniGene:Dr.76288
ProteinModelPortal:Q7ZWD1 STRING:Q7ZWD1 GeneID:336786
KEGG:dre:336786 CTD:336786 InParanoid:Q7ZWD1 NextBio:20811903
ArrayExpress:Q7ZWD1 Uniprot:Q7ZWD1
Length = 440
Score = 435 (158.2 bits), Expect = 2.2e-41, Sum P(2) = 2.2e-41
Identities = 96/244 (39%), Positives = 140/244 (57%)
Query: 377 SFDDIGGLSEYIDALKEMVFFPLLYPDFFASYHITPPRGVLLCGPPGTGKTLIARALACA 436
++ DIGGL I +KE V PL +P+++ I PP+GV+L G PGTGKTL+A+A+A
Sbjct: 183 TYADIGGLDSQIQEIKESVELPLTHPEYYEEMGIKPPKGVILYGAPGTGKTLLAKAVANQ 242
Query: 437 ASKAGQKVSFYMRKGADVLSKWVGEAERQLKLLFEEAQRNQPSIIFFDEIDGLAPVRSSK 496
S +F G++++ K++G+ + ++ LF A+ + PSI+F DEID + R
Sbjct: 243 TS-----ATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAIGTKRYDS 297
Query: 497 QEQIHNSIVSTLLALM---DGLDSRGQVVLIGATNRVDAIDGALRRPGRFDREFNFPLPG 553
I T+L L+ DG DSRG V +I ATNR++ +D AL RPGR DR+ FPLP
Sbjct: 298 NSGGEREIQRTMLELLNQLDGFDSRGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPD 357
Query: 554 CEARAEILDIHTRKWKQPPSRELKSELAASCVGYCGADLKALCTEAAIRAFREKYPQVYT 613
+ + I IHT + L +L + GAD+KA+CTEA + A RE+ +V
Sbjct: 358 EKTKRRIFQIHTSRMTVADDVTL-DDLILAKDDLSGADIKAICTEAGLMALRERRMKVTN 416
Query: 614 SDDK 617
D K
Sbjct: 417 EDFK 420
Score = 39 (18.8 bits), Expect = 2.2e-41, Sum P(2) = 2.2e-41
Identities = 15/55 (27%), Positives = 20/55 (36%)
Query: 89 SVNLEDYTDSSGSEDEDLMRPSYRPLRNRMRN---NMSQDELSPSKRKKVVEAKP 140
SV E Y D+DL+ P L N + + D+ P VE P
Sbjct: 126 SVGSEHYVSILSFVDKDLLEPGCSVLLNHKVHAVIGVLMDDTDPLVTVMKVEKAP 180
>WB|WBGene00004501 [details] [associations]
symbol:rpt-1 species:6239 "Caenorhabditis elegans"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0009792 "embryo development
ending in birth or egg hatching" evidence=IMP] [GO:0000003
"reproduction" evidence=IMP] [GO:0002119 "nematode larval
development" evidence=IMP] [GO:0008340 "determination of adult
lifespan" evidence=IMP] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0008340
GO:GO:0009792 GO:GO:0005737 GO:GO:0002119 GO:GO:0000003
GO:GO:0016887 GO:GO:0000502 GO:GO:0006511 EMBL:Z78012
eggNOG:COG1222 TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 KO:K03061
OMA:DIRWELI GeneTree:ENSGT00550000074978 PIR:T20152
RefSeq:NP_506005.1 ProteinModelPortal:Q18787 SMR:Q18787
IntAct:Q18787 MINT:MINT-212537 STRING:Q18787 PaxDb:Q18787
PRIDE:Q18787 EnsemblMetazoa:C52E4.4.1 EnsemblMetazoa:C52E4.4.2
GeneID:179641 KEGG:cel:CELE_C52E4.4 UCSC:C52E4.4.1 CTD:179641
WormBase:C52E4.4 InParanoid:Q18787 NextBio:906264 Uniprot:Q18787
Length = 435
Score = 448 (162.8 bits), Expect = 2.2e-41, P = 2.2e-41
Identities = 106/267 (39%), Positives = 159/267 (59%)
Query: 370 LQVDES--VSFDDIGGLSEYIDALKEMVFFPLLYPDFFASYHITPPRGVLLCGPPGTGKT 427
+QV+E V++ D+GG + I+ L+E+V PLL+P+ + + I PP+GVLL GPPGTGKT
Sbjct: 166 MQVEEKPDVTYSDVGGCKDQIEKLREVVETPLLHPERYVNLGIEPPKGVLLYGPPGTGKT 225
Query: 428 LIARALACAASKAGQKVSFYMRKGADVLSKWVGEAERQLKLLFEEAQRNQPSIIFFDEID 487
L ARA+A +V G++++ K+VGE R ++ LFE A+ + +IFFDEID
Sbjct: 226 LCARAVANRTDACFIRVI-----GSELVQKYVGEGARMVRELFEMARTKKACLIFFDEID 280
Query: 488 GLAPVRSSKQEQIHNSIVSTLLAL---MDGLDSRGQVVLIGATNRVDAIDGALRRPGRFD 544
+ R + N + T+L L +DG D RG + ++ ATNR D +D AL RPGR D
Sbjct: 281 AVGGARFDDGQGGDNEVQRTMLELINQLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLD 340
Query: 545 REFNFPLPGCEARAEILDIHTRKWKQPPSRELKSELAAS-CVGYCGADLKALCTEAAIRA 603
R+ F LP RA IL IH ++ R+++ +L A C GA+++++CTEA + A
Sbjct: 341 RKVEFALPDLAGRAHILKIHAKQMSV--ERDIRYDLLARLCPNSTGAEIRSVCTEAGMFA 398
Query: 604 FREKYPQVYTSDDKFLIDVDSVTVEKY 630
R + +V T D FL ++ V V+ Y
Sbjct: 399 IRARR-KVATEKD-FLEAINKV-VKGY 422
>UNIPROTKB|Q18787 [details] [associations]
symbol:rpt-1 "26S protease regulatory subunit 7"
species:6239 "Caenorhabditis elegans" [GO:0006200 "ATP catabolic
process" evidence=ISS] [GO:0005515 "protein binding" evidence=IPI]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=ISS]
[GO:0000502 "proteasome complex" evidence=ISS] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005634 GO:GO:0008340 GO:GO:0009792 GO:GO:0005737
GO:GO:0002119 GO:GO:0000003 GO:GO:0016887 GO:GO:0000502
GO:GO:0006511 EMBL:Z78012 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 KO:K03061 OMA:DIRWELI
GeneTree:ENSGT00550000074978 PIR:T20152 RefSeq:NP_506005.1
ProteinModelPortal:Q18787 SMR:Q18787 IntAct:Q18787 MINT:MINT-212537
STRING:Q18787 PaxDb:Q18787 PRIDE:Q18787 EnsemblMetazoa:C52E4.4.1
EnsemblMetazoa:C52E4.4.2 GeneID:179641 KEGG:cel:CELE_C52E4.4
UCSC:C52E4.4.1 CTD:179641 WormBase:C52E4.4 InParanoid:Q18787
NextBio:906264 Uniprot:Q18787
Length = 435
Score = 448 (162.8 bits), Expect = 2.2e-41, P = 2.2e-41
Identities = 106/267 (39%), Positives = 159/267 (59%)
Query: 370 LQVDES--VSFDDIGGLSEYIDALKEMVFFPLLYPDFFASYHITPPRGVLLCGPPGTGKT 427
+QV+E V++ D+GG + I+ L+E+V PLL+P+ + + I PP+GVLL GPPGTGKT
Sbjct: 166 MQVEEKPDVTYSDVGGCKDQIEKLREVVETPLLHPERYVNLGIEPPKGVLLYGPPGTGKT 225
Query: 428 LIARALACAASKAGQKVSFYMRKGADVLSKWVGEAERQLKLLFEEAQRNQPSIIFFDEID 487
L ARA+A +V G++++ K+VGE R ++ LFE A+ + +IFFDEID
Sbjct: 226 LCARAVANRTDACFIRVI-----GSELVQKYVGEGARMVRELFEMARTKKACLIFFDEID 280
Query: 488 GLAPVRSSKQEQIHNSIVSTLLAL---MDGLDSRGQVVLIGATNRVDAIDGALRRPGRFD 544
+ R + N + T+L L +DG D RG + ++ ATNR D +D AL RPGR D
Sbjct: 281 AVGGARFDDGQGGDNEVQRTMLELINQLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLD 340
Query: 545 REFNFPLPGCEARAEILDIHTRKWKQPPSRELKSELAAS-CVGYCGADLKALCTEAAIRA 603
R+ F LP RA IL IH ++ R+++ +L A C GA+++++CTEA + A
Sbjct: 341 RKVEFALPDLAGRAHILKIHAKQMSV--ERDIRYDLLARLCPNSTGAEIRSVCTEAGMFA 398
Query: 604 FREKYPQVYTSDDKFLIDVDSVTVEKY 630
R + +V T D FL ++ V V+ Y
Sbjct: 399 IRARR-KVATEKD-FLEAINKV-VKGY 422
>POMBASE|SPBC16C6.07c [details] [associations]
symbol:rpt1 "19S proteasome regulatory subunit Rpt1
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0004175
"endopeptidase activity" evidence=ISO] [GO:0005524 "ATP binding"
evidence=ISM] [GO:0005634 "nucleus" evidence=IDA] [GO:0005829
"cytosol" evidence=IDA] [GO:0006511 "ubiquitin-dependent protein
catabolic process" evidence=ISO] [GO:0007346 "regulation of mitotic
cell cycle" evidence=IC] [GO:0008540 "proteasome regulatory
particle, base subcomplex" evidence=ISO] [GO:0016887 "ATPase
activity" evidence=ISO] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 PomBase:SPBC16C6.07c GO:GO:0005829 GO:GO:0005524
GO:GO:0005634 GO:GO:0007346 EMBL:CU329671 GenomeReviews:CU329671_GR
GO:GO:0016887 GO:GO:0004175 GO:GO:0006511 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 GO:GO:0008540 KO:K03061
OMA:DIRWELI PIR:T39558 RefSeq:NP_596805.1 ProteinModelPortal:O42931
IntAct:O42931 STRING:O42931 PRIDE:O42931
EnsemblFungi:SPBC16C6.07c.1 GeneID:2539862 KEGG:spo:SPBC16C6.07c
OrthoDB:EOG4B01XN NextBio:20801008 Uniprot:O42931
Length = 438
Score = 447 (162.4 bits), Expect = 2.8e-41, P = 2.8e-41
Identities = 107/262 (40%), Positives = 152/262 (58%)
Query: 370 LQVDES--VSFDDIGGLSEYIDALKEMVFFPLLYPDFFASYHITPPRGVLLCGPPGTGKT 427
+QV+E V++ D+GG E I+ L+E+V PLL P+ F I PP+G++L GPPGTGKT
Sbjct: 168 MQVEEKPDVTYGDVGGCKEQIERLREVVELPLLSPERFVKLGIDPPKGIMLYGPPGTGKT 227
Query: 428 LIARALACAASKAGQKVSFYMRKGADVLSKWVGEAERQLKLLFEEAQRNQPSIIFFDEID 487
L ARA+A +F G++++ K+VGE R ++ LFE A+ + IIFFDEID
Sbjct: 228 LCARAVANRTD-----ATFIRVIGSELVQKYVGEGARMVRELFEMARTKKACIIFFDEID 282
Query: 488 GLAPVRSSKQEQIHNSIVSTLLAL---MDGLDSRGQVVLIGATNRVDAIDGALRRPGRFD 544
+ R N + T+L L +DG D RG + ++ ATNR + +D AL RPGR D
Sbjct: 283 AIGGARFDDGAGGDNEVQRTMLELITQLDGFDPRGNIKVLFATNRPNTLDEALMRPGRID 342
Query: 545 REFNFPLPGCEARAEILDIHTRKWKQPPSRELKSELAAS-CVGYCGADLKALCTEAAIRA 603
R+ F LP E RA IL IH + ++++ EL A C GA+L+++CTEA + A
Sbjct: 343 RKVEFGLPDLEGRAHILRIHAKS--MAIDKDIRWELIARLCPSQTGAELRSVCTEAGMFA 400
Query: 604 FREKYPQVYTSDDKFLIDVDSV 625
R + +V T D FL V V
Sbjct: 401 IRARR-RVATEKD-FLDAVQKV 420
>TAIR|locus:2147670 [details] [associations]
symbol:RPT6A "regulatory particle triple-A ATPase 6A"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM;TAS] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=IGI;ISS] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=TAS]
[GO:0005886 "plasma membrane" evidence=IDA] [GO:0000502 "proteasome
complex" evidence=IDA] [GO:0005829 "cytosol" evidence=IDA]
[GO:0008540 "proteasome regulatory particle, base subcomplex"
evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005829 GO:GO:0005886 GO:GO:0005524
GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0030163
GO:GO:0000502 HSSP:Q01853 GO:GO:0017111 EMBL:AF296836
eggNOG:COG1222 TIGRFAMs:TIGR01242 HOGENOM:HOG000225143
EMBL:AF123395 EMBL:AB044348 EMBL:AY065174 EMBL:BT009668
IPI:IPI00542662 RefSeq:NP_568389.1 UniGene:At.10507
ProteinModelPortal:Q9C5U3 SMR:Q9C5U3 IntAct:Q9C5U3 STRING:Q9C5U3
PaxDb:Q9C5U3 PRIDE:Q9C5U3 EnsemblPlants:AT5G19990.1 GeneID:832121
KEGG:ath:AT5G19990 TAIR:At5g19990 InParanoid:Q9C5U3 KO:K03066
OMA:QNIKVIM PhylomeDB:Q9C5U3 ProtClustDB:CLSN2687185 Uniprot:Q9C5U3
Length = 419
Score = 447 (162.4 bits), Expect = 2.8e-41, P = 2.8e-41
Identities = 105/259 (40%), Positives = 158/259 (61%)
Query: 371 QVDESVSFDDIGGLSEYIDALKEMVFFPLLYPDFFASYHITPPRGVLLCGPPGTGKTLIA 430
+V +S ++D IGGL + I +KE++ P+ +P+ F S I P+GVLL GPPGTGKTL+A
Sbjct: 154 KVPDS-TYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLA 212
Query: 431 RALACAASKAGQKVSFYMRKGADVLSKWVGEAERQLKLLFEEAQRNQPSIIFFDEIDGLA 490
RA+A +VS G++++ K++GE R ++ LF A+ + PSIIF DEID +
Sbjct: 213 RAVAHHTDCTFIRVS-----GSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIG 267
Query: 491 PVRSSKQEQIHNSIVS-TLLALM---DGLDSRGQVVLIGATNRVDAIDGALRRPGRFDRE 546
R +S V T+L L+ DG ++ ++ ++ ATNR+D +D AL RPGR DR+
Sbjct: 268 SARMESGSGNGDSEVQRTMLELLNQLDGFEASNKIKVLMATNRIDILDQALLRPGRIDRK 327
Query: 547 FNFPLPGCEARAEILDIHTRKWKQPPSRELKSELAASCVGYCGADLKALCTEAAIRAFRE 606
FP P E+R +IL IH+RK +LK ++A G GA+LKA+CTEA + A RE
Sbjct: 328 IEFPNPNEESRFDILKIHSRKMNLMRGIDLK-KIAEKMNGASGAELKAVCTEAGMFALRE 386
Query: 607 KYPQVYTSDDKFLIDVDSV 625
+ +V+ + + F + V V
Sbjct: 387 R--RVHVTQEDFEMAVAKV 403
>TAIR|locus:2147685 [details] [associations]
symbol:AT5G20000 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=ISM;TAS]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=ISS]
[GO:0008540 "proteasome regulatory particle, base subcomplex"
evidence=ISS] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0000502 "proteasome
complex" evidence=IDA] [GO:0005829 "cytosol" evidence=RCA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0030163 GO:GO:0000502 HSSP:Q01853
GO:GO:0017111 EMBL:AF296836 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 KO:K03066 ProtClustDB:CLSN2687185
EMBL:AY039965 EMBL:AY079403 EMBL:AK226206 EMBL:AY087503
IPI:IPI00530138 RefSeq:NP_197500.1 UniGene:At.51251
ProteinModelPortal:Q94BQ2 SMR:Q94BQ2 IntAct:Q94BQ2 STRING:Q94BQ2
PaxDb:Q94BQ2 PRIDE:Q94BQ2 EnsemblPlants:AT5G20000.1 GeneID:832122
KEGG:ath:AT5G20000 GeneFarm:1515 TAIR:At5g20000 InParanoid:Q94BQ2
OMA:TEILRIH PhylomeDB:Q94BQ2 Uniprot:Q94BQ2
Length = 419
Score = 447 (162.4 bits), Expect = 2.8e-41, P = 2.8e-41
Identities = 105/259 (40%), Positives = 158/259 (61%)
Query: 371 QVDESVSFDDIGGLSEYIDALKEMVFFPLLYPDFFASYHITPPRGVLLCGPPGTGKTLIA 430
+V +S ++D IGGL + I +KE++ P+ +P+ F S I P+GVLL GPPGTGKTL+A
Sbjct: 154 KVPDS-TYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLA 212
Query: 431 RALACAASKAGQKVSFYMRKGADVLSKWVGEAERQLKLLFEEAQRNQPSIIFFDEIDGLA 490
RA+A +VS G++++ K++GE R ++ LF A+ + PSIIF DEID +
Sbjct: 213 RAVAHHTDCTFIRVS-----GSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIG 267
Query: 491 PVRSSKQEQIHNSIVS-TLLALM---DGLDSRGQVVLIGATNRVDAIDGALRRPGRFDRE 546
R +S V T+L L+ DG ++ ++ ++ ATNR+D +D AL RPGR DR+
Sbjct: 268 SARMESGSGNGDSEVQRTMLELLNQLDGFEASNKIKVLMATNRIDILDQALLRPGRIDRK 327
Query: 547 FNFPLPGCEARAEILDIHTRKWKQPPSRELKSELAASCVGYCGADLKALCTEAAIRAFRE 606
FP P E+R +IL IH+RK +LK ++A G GA+LKA+CTEA + A RE
Sbjct: 328 IEFPNPNEESRFDILKIHSRKMNLMRGIDLK-KIAEKMNGASGAELKAVCTEAGMFALRE 386
Query: 607 KYPQVYTSDDKFLIDVDSV 625
+ +V+ + + F + V V
Sbjct: 387 R--RVHVTQEDFEMAVAKV 403
>SGD|S000003016 [details] [associations]
symbol:RPT6 "ATPase of the 19S regulatory particle of the 26S
proteasome" species:4932 "Saccharomyces cerevisiae" [GO:0034515
"proteasome storage granule" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0006338
"chromatin remodeling" evidence=IMP] [GO:0005634 "nucleus"
evidence=IEA;IDA] [GO:0008540 "proteasome regulatory particle, base
subcomplex" evidence=IDA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0070682
"proteasome regulatory particle assembly" evidence=IMP] [GO:0032968
"positive regulation of transcription elongation from RNA
polymerase II promoter" evidence=IMP] [GO:0045899 "positive
regulation of RNA polymerase II transcriptional preinitiation
complex assembly" evidence=IGI;IMP] [GO:0016887 "ATPase activity"
evidence=ISS] [GO:0019904 "protein domain specific binding"
evidence=IDA] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=IPI] [GO:0006289 "nucleotide-excision
repair" evidence=IGI] [GO:0051091 "positive regulation of
sequence-specific DNA binding transcription factor activity"
evidence=IMP] [GO:0043433 "negative regulation of sequence-specific
DNA binding transcription factor activity" evidence=IMP]
[GO:0000502 "proteasome complex" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 SGD:S000003016
GO:GO:0005524 GO:GO:0005634 GO:GO:0019904 GO:GO:0051091
GO:GO:0043161 EMBL:BK006941 GO:GO:0016887 GO:GO:0006338
GO:GO:0043433 GO:GO:0045899 GO:GO:0006289 GO:GO:0032968
GO:GO:0070682 eggNOG:COG1222 TIGRFAMs:TIGR01242 GO:GO:0034515
HOGENOM:HOG000225143 GO:GO:0008540 PDB:4B4T PDBsum:4B4T KO:K03066
OMA:TEILRIH GeneTree:ENSGT00550000074947 OrthoDB:EOG44N21J
EMBL:X66400 EMBL:L01626 EMBL:Z72570 EMBL:AY693135 PIR:S64052
RefSeq:NP_011467.1 ProteinModelPortal:Q01939 SMR:Q01939
DIP:DIP-979N IntAct:Q01939 MINT:MINT-568023 STRING:Q01939
PaxDb:Q01939 PeptideAtlas:Q01939 EnsemblFungi:YGL048C GeneID:852834
KEGG:sce:YGL048C NextBio:972403 Genevestigator:Q01939
GermOnline:YGL048C Uniprot:Q01939
Length = 405
Score = 446 (162.1 bits), Expect = 3.6e-41, P = 3.6e-41
Identities = 102/258 (39%), Positives = 155/258 (60%)
Query: 371 QVDESVSFDDIGGLSEYIDALKEMVFFPLLYPDFFASYHITPPRGVLLCGPPGTGKTLIA 430
+V +S ++D +GGL++ I +KE++ P+ +P+ F S I P+GV+L GPPGTGKTL+A
Sbjct: 141 KVPDS-TYDMVGGLTKQIKEIKEVIELPVKHPELFESLGIAQPKGVILYGPPGTGKTLLA 199
Query: 431 RALACAASKAGQKVSFYMRKGADVLSKWVGEAERQLKLLFEEAQRNQPSIIFFDEIDGLA 490
RA+A +VS GA+++ K++GE R ++ LF A+ + PSIIF DEID +
Sbjct: 200 RAVAHHTDCKFIRVS-----GAELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIG 254
Query: 491 PVRSSKQEQIHNSIVSTLLALM---DGLDSRGQVVLIGATNRVDAIDGALRRPGRFDREF 547
R + + T+L L+ DG ++ + +I ATNR+D +D AL RPGR DR+
Sbjct: 255 STRVEGSGGGDSEVQRTMLELLNQLDGFETSKNIKIIMATNRLDILDPALLRPGRIDRKI 314
Query: 548 NFPLPGCEARAEILDIHTRKWKQPPSRELKSELAASCVGYCGADLKALCTEAAIRAFREK 607
FP P ARAEIL IH+RK L+ ++A G GAD+K +CTEA + A RE+
Sbjct: 315 EFPPPSVAARAEILRIHSRKMNLTRGINLR-KVAEKMNGCSGADVKGVCTEAGMYALRER 373
Query: 608 YPQVYTSDDKFLIDVDSV 625
+++ + + F + V V
Sbjct: 374 --RIHVTQEDFELAVGKV 389
>UNIPROTKB|E1BTS8 [details] [associations]
symbol:LOC426240 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 Pfam:PF02359 GO:GO:0005524 GO:GO:0017111
Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
InterPro:IPR015415 Pfam:PF09336 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
GeneTree:ENSGT00700000104534 EMBL:AADN02060646 EMBL:AADN02060647
EMBL:AADN02060648 EMBL:AADN02060649 EMBL:AADN02060650
EMBL:AADN02060651 EMBL:AADN02060652 EMBL:AADN02060653
IPI:IPI00823321 Ensembl:ENSGALT00000039430 ArrayExpress:E1BTS8
Uniprot:E1BTS8
Length = 804
Score = 466 (169.1 bits), Expect = 4.3e-41, P = 4.3e-41
Identities = 140/404 (34%), Positives = 205/404 (50%)
Query: 376 VSFDDIGGLSEYIDALKEMVFFPLLYPDFFASYHITPPRGVLLCGPPGTGKTLIARALAC 435
V +DDIGG + + +KEMV PL +P F + + PPRG+LL GPPGTGKTLIARA+A
Sbjct: 201 VGYDDIGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILLYGPPGTGKTLIARAVA- 259
Query: 436 AASKAGQKVSFYMRKGADVLSKWVGEAERQLKLLFEEAQRNQPSIIFFDEIDGLAPVRSS 495
++ G F++ G +++SK GE E + A + F D P +
Sbjct: 260 --NETG--AFFFLINGPEIMSKLAGEGESACRKKISPAPPPLKTAGIFKS-DDCFPSPQT 314
Query: 496 KQEQIHNSIVSTLLALMDGLDSRGQVVLIGATNRVDAIDGALRRPGRFDREFNFPLPGCE 555
E + IVS LL LMDGL R V+++ ATNR ++ID ALRR GRFDRE + +P
Sbjct: 315 HGE-VERRIVSQLLTLMDGLKQRAHVIVMAATNRPNSIDPALRRFGRFDREVDIGIPDAT 373
Query: 556 ARAEILDIHTRKWKQPPSRELKSELAASCVGYCGADLKALCTEAAIRAFREKYPQVYTSD 615
R EIL IHT+ K +L+ ++A G+ GADL ALC+EAA++A R+K + D
Sbjct: 374 GRLEILQIHTKNMKLADDVDLE-QVANETHGHVGADLAALCSEAALQAIRKKMDLIDLED 432
Query: 616 DKFLIDV-DSVTVEKYHFIEAMSTITPAAHRGATVHSRPLSLVVAPCLQ---RHLQKAMN 671
+ +V +S+ V F A+S P+A R V ++ L+ R LQ+ +
Sbjct: 433 ETIDAEVMNSLAVTMDDFRWALSQSNPSALRETVVEVPQVTWEDIGGLEDVKRELQELVQ 492
Query: 672 YISDIFPPLGMSSELTKLCML-SHGSAIPLVYRPRLLLCGSEGTGVDHLGPAILHELEKF 730
Y P+ + K M S G +L G G G L AI +E +
Sbjct: 493 Y------PVEHPDKFLKFGMTPSKG----------VLFYGPPGCGKTLLAKAIANECQAN 536
Query: 731 PVHSLGLPALLSDPSAKTPEEALVHIFGEARRTTPSILYIPQFN 774
+ G P LL+ ++ E + IF +AR+ P +L+ + +
Sbjct: 537 FISIKG-PELLTMWFGES-EANVREIFDKARQAAPCVLFFDELD 578
Score = 407 (148.3 bits), Expect = 4.0e-34, Sum P(2) = 4.0e-34
Identities = 87/235 (37%), Positives = 140/235 (59%)
Query: 376 VSFDDIGGLSEYIDALKEMVFFPLLYPDFFASYHITPPRGVLLCGPPGTGKTLIARALAC 435
V+++DIGGL + L+E+V +P+ +PD F + +TP +GVL GPPG GKTL+A+A+A
Sbjct: 472 VTWEDIGGLEDVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIAN 531
Query: 436 AASKAGQKVSFYMRKGADVLSKWVGEAERQLKLLFEEAQRNQPSIIFFDEIDGLAPVRSS 495
+ +F KG ++L+ W GE+E ++ +F++A++ P ++FFDE+D +A R
Sbjct: 532 EC-----QANFISIKGPELLTMWFGESEANVREIFDKARQAAPCVLFFDELDSIAKARGG 586
Query: 496 KQEQ---IHNSIVSTLLALMDGLDSRGQVVLIGATNRVDAIDGALRRPGRFDREFNFPLP 552
+ +++ +L MDG+ ++ V +IGATNR D ID A+ RPGR D+ PLP
Sbjct: 587 NIGDGGGAADRVINQILTEMDGMSTKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPLP 646
Query: 553 GCEARAEILDIHTRKWKQPPSRELKSELAASCV-GYCGADLKALCTEAAIRAFRE 606
++R IL + RK P ++++ + A G+ GADL +C A A RE
Sbjct: 647 DEKSRVAILKANLRK--SPVAKDVDLDFLAKMTNGFSGADLTEICQRACKLAIRE 699
Score = 44 (20.5 bits), Expect = 4.0e-34, Sum P(2) = 4.0e-34
Identities = 17/55 (30%), Positives = 28/55 (50%)
Query: 335 VAASGWGHQGDTLAALTSGIQTAGPSSKGGADIQPLQVDESVSFDDIGGLSEYID 389
VA GH G LAAL S + A + + D+ L+ DE++ + + L+ +D
Sbjct: 397 VANETHGHVGADLAALCS--EAALQAIRKKMDLIDLE-DETIDAEVMNSLAVTMD 448
>DICTYBASE|DDB_G0278435 [details] [associations]
symbol:DDB_G0278435 "AAA ATPase domain-containing
protein" species:44689 "Dictyostelium discoideum" [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0008150 "biological_process" evidence=ND]
[GO:0005575 "cellular_component" evidence=ND] [GO:0016887 "ATPase
activity" evidence=ISS] [GO:0006200 "ATP catabolic process"
evidence=ISS] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
dictyBase:DDB_G0278435 GO:GO:0005524 EMBL:AAFI02000023
GO:GO:0016887 eggNOG:COG0464 KO:K14575 InterPro:IPR009010
SUPFAM:SSF50692 RefSeq:XP_642364.1 ProteinModelPortal:Q54Y38
EnsemblProtists:DDB0237527 GeneID:8621569 KEGG:ddi:DDB_G0278435
InParanoid:Q54Y38 OMA:TSICREA Uniprot:Q54Y38
Length = 886
Score = 466 (169.1 bits), Expect = 6.4e-41, P = 6.4e-41
Identities = 104/232 (44%), Positives = 146/232 (62%)
Query: 376 VSFDDIGGLSEYIDALKEMVFFPLLYPDFFASYHITPPRGVLLCGPPGTGKTLIARALAC 435
V + DIGG LKE + +PL YP F I PP+G+LL GPPG KTL+A+ALA
Sbjct: 619 VFWGDIGGQEHIKQKLKEAIEWPLKYPQSFIRMGIKPPKGILLYGPPGCSKTLLAKALA- 677
Query: 436 AASKAGQKVSFYMRKGADVLSKWVGEAERQLKLLFEEAQRNQPSIIFFDEIDGLAPVRSS 495
+++G ++F KG ++LSKWVGE+ER ++ +F++A++N PSI+FFDEIDGLA RS
Sbjct: 678 --TESG--LNFIAVKGPELLSKWVGESERAVRDIFKKARQNSPSILFFDEIDGLAISRSG 733
Query: 496 KQEQIHNSIVSTLLALMDGLDSRGQVVLIGATNRVDAIDGALRRPGRFDREFNFPLPGCE 555
+ +VS LL MDG+ V +IGATNR D ID A+ R GR DR P +
Sbjct: 734 EGSGAVERVVSQLLTEMDGIQPLTNVTIIGATNRPDIIDKAILRAGRIDRILYISPPDLD 793
Query: 556 ARAEILDIHTRKWKQPPSRELK-SELAASCVGYCGADLKALCTEAAIRAFRE 606
AR EI +IH +K P S ++ ++L+ GY GA++ ++C EA+I A +E
Sbjct: 794 ARKEIFNIHLKK--VPHSSDIDINQLSILTDGYSGAEVTSICREASIAAMKE 843
Score = 336 (123.3 bits), Expect = 1.1e-26, P = 1.1e-26
Identities = 80/211 (37%), Positives = 120/211 (56%)
Query: 430 ARALACAASKAGQKVSFYMRKGADVLSKWVGEAERQLKLLFEEAQRNQPSIIFFDEIDGL 489
++ L A ++F KG ++LSKWVGE+ER ++ +F++A++N PSI+FFDEIDGL
Sbjct: 668 SKTLLAKALATESGLNFIAVKGPELLSKWVGESERAVRDIFKKARQNSPSILFFDEIDGL 727
Query: 490 APVRSSKQEQIHNSIVSTLLALMDGLDSRGQVVLIGATNRVDAIDGALRRPGRFDREFNF 549
A RS + +VS LL MDG+ V +IGATNR D ID A+ R GR DR
Sbjct: 728 AISRSGEGSGAVERVVSQLLTEMDGIQPLTNVTIIGATNRPDIIDKAILRAGRIDRILYI 787
Query: 550 PLPGCEARAEILDIHTRKWKQPPSRELK-SELAASCVGYCGADLKALCTEAAIRAFREKY 608
P +AR EI +IH +K P S ++ ++L+ GY GA++ ++C EA+I A +E
Sbjct: 788 SPPDLDARKEIFNIHLKK--VPHSSDIDINQLSILTDGYSGAEVTSICREASIAAMKE-- 843
Query: 609 PQVYTSDDKFLIDVDSVTVEKYHFIEAMSTI 639
D+++ + HFI A+ +
Sbjct: 844 ------------DINAKEINMSHFISAIGNV 862
Score = 279 (103.3 bits), Expect = 1.2e-34, Sum P(2) = 1.2e-34
Identities = 55/143 (38%), Positives = 85/143 (59%)
Query: 375 SVSFDDIGGLSEYIDALKEMVFFPLLYPDFFASYHITPPRGVLLCGPPGTGKTLIARALA 434
+++F IGGL + ++E++ D S+ + PP+G+LL GPPGTGKTL+AR +A
Sbjct: 308 NLNFQSIGGLDLQVKQIRELIDLSFYKLDLLKSFGVKPPKGILLYGPPGTGKTLLARIVA 367
Query: 435 CAASKAGQKVSFYMRKGADVLSKWVGEAERQLKLLFEEAQRNQPSIIFFDEIDGLAPVRS 494
+ + + GAD+L K+ G E+ L+ +F++A + PSIIF DE+D L P R
Sbjct: 368 TQTN-----ATLFTINGADILDKFYGMTEKTLQKIFKDAAQKSPSIIFIDELDALCPKRE 422
Query: 495 SKQEQIHNSIVSTLLALMDGLDS 517
++ IV +LL LMDG+ S
Sbjct: 423 DNSSEVEKRIVGSLLTLMDGVVS 445
Score = 186 (70.5 bits), Expect = 1.2e-34, Sum P(2) = 1.2e-34
Identities = 75/265 (28%), Positives = 127/265 (47%)
Query: 520 QVVLIGATNRVDAIDGALRRPGRFDREFNFPLPGCEARAEILDIHTRKW-KQPPSRELKS 578
+V++IG TNR D+ID ALRRPGRFD E +P + R +IL+I K Q S+E+ +
Sbjct: 468 KVIVIGCTNRPDSIDSALRRPGRFDNEIEISIPNQQGREQILNIFLSKIPNQLTSQEI-A 526
Query: 579 ELAASCVGYCGADLKALCTEAAIRAFREKYPQVYTSDDKFLIDVDSVTVEKYHFIEAMST 638
+A+ G+ GAD+++LC EA+++ F ++ + K ++ EK +
Sbjct: 527 MIASKTHGFVGADIESLCKEASLKCFN----RIKNENQKLFQSINIEKEEKGKEEKQEEN 582
Query: 639 ITPAAHR-GATVHSRPLSL-VVAPCLQRHLQKAMNYI--SDIFPPLGMSSELTKLCM--L 692
+ +++ L+L V P R + + + DI + +L + L
Sbjct: 583 LQNLLSLIKLSMNDMLLALNQVKPSSMREVVVEIPKVFWGDIGGQEHIKQKLKEAIEWPL 642
Query: 693 SHG-SAIPLVYRPR--LLLCGSEGTGVDHLGPAILHELEKFPVHSLGLPALLSDPSAKTP 749
+ S I + +P +LL G G L A+ E + G P LLS ++
Sbjct: 643 KYPQSFIRMGIKPPKGILLYGPPGCSKTLLAKALATESGLNFIAVKG-PELLSKWVGES- 700
Query: 750 EEALVHIFGEARRTTPSILYIPQFN 774
E A+ IF +AR+ +PSIL+ + +
Sbjct: 701 ERAVRDIFKKARQNSPSILFFDEID 725
>DICTYBASE|DDB_G0270784 [details] [associations]
symbol:psmC1 "TAT binding protein alpha"
species:44689 "Dictyostelium discoideum" [GO:0045335 "phagocytic
vesicle" evidence=IDA] [GO:0030587 "sorocarp development"
evidence=IMP] [GO:0000910 "cytokinesis" evidence=IMP] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0000502 "proteasome complex" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
dictyBase:DDB_G0270784 GO:GO:0005524 GO:GO:0005634
EMBL:AAFI02000005 GenomeReviews:CM000150_GR GO:GO:0045335
GO:GO:0030587 GO:GO:0000910 GO:GO:0030163 GO:GO:0000502
GO:GO:0017111 HSSP:Q9WZ49 eggNOG:COG1222 TIGRFAMs:TIGR01242
KO:K03062 OMA:FIRNQER RefSeq:XP_646726.1 ProteinModelPortal:Q55BV5
STRING:Q55BV5 PRIDE:Q55BV5 EnsemblProtists:DDB0232964
GeneID:8617698 KEGG:ddi:DDB_G0270784 ProtClustDB:PTZ00361
Uniprot:Q55BV5
Length = 439
Score = 431 (156.8 bits), Expect = 7.5e-41, Sum P(2) = 7.5e-41
Identities = 95/244 (38%), Positives = 140/244 (57%)
Query: 377 SFDDIGGLSEYIDALKEMVFFPLLYPDFFASYHITPPRGVLLCGPPGTGKTLIARALACA 436
S+ DIGGL + +KE + PL +P+ + I PP+GV+L G PGTGKTL+A+A+A
Sbjct: 182 SYSDIGGLEAQVQEMKEAIELPLTHPELYEEIGIKPPKGVILYGEPGTGKTLLAKAVANQ 241
Query: 437 ASKAGQKVSFYMRKGADVLSKWVGEAERQLKLLFEEAQRNQPSIIFFDEIDGLAPVRSSK 496
S +F G++++ K++G+ + ++ LF A PSI+F DEID + R
Sbjct: 242 TS-----ATFLRVVGSELIQKYLGDGPKLVRELFRVADECAPSIVFIDEIDAVGTKRYDS 296
Query: 497 QEQIHNSIVSTLLALM---DGLDSRGQVVLIGATNRVDAIDGALRRPGRFDREFNFPLPG 553
Q I T+L L+ DG D+R V +I ATNR++ +D AL RPGR DR+ FPLP
Sbjct: 297 QSGGEREIQRTMLELLNQLDGFDARTDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPD 356
Query: 554 CEARAEILDIHTRKWKQPPSRELKSELAASCVGYCGADLKALCTEAAIRAFREKYPQVYT 613
+ + +I +IHT K L+ E S GAD+KA+CTE+ + A RE+ +V
Sbjct: 357 IKTKRKIFEIHTAKMNLSEDVNLE-EFVMSKDDLSGADIKAICTESGLLALRERRMRVTH 415
Query: 614 SDDK 617
+D K
Sbjct: 416 TDFK 419
Score = 38 (18.4 bits), Expect = 7.5e-41, Sum P(2) = 7.5e-41
Identities = 12/45 (26%), Positives = 20/45 (44%)
Query: 118 MRNNMSQDELSPSKRKKV--VEAKPTPRREGLRPRRSMVATRKQL 160
M NN SQ + ++K + P P + G + +R T +L
Sbjct: 1 MGNNQSQGQGDKGEKKDQPKYQPPPPPTQFGKKKKRRGAETSTKL 45
>SGD|S000005785 [details] [associations]
symbol:RPT4 "ATPase of the 19S regulatory particle of the 26S
proteasome" species:4932 "Saccharomyces cerevisiae" [GO:0016887
"ATPase activity" evidence=ISS] [GO:0045899 "positive regulation of
RNA polymerase II transcriptional preinitiation complex assembly"
evidence=IMP] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0005634
"nucleus" evidence=IDA] [GO:0008540 "proteasome regulatory
particle, base subcomplex" evidence=IDA] [GO:0000502 "proteasome
complex" evidence=IEA] [GO:0070682 "proteasome regulatory particle
assembly" evidence=IMP] [GO:0030433 "ER-associated protein
catabolic process" evidence=IMP] [GO:0032968 "positive regulation
of transcription elongation from RNA polymerase II promoter"
evidence=IMP] [GO:0006289 "nucleotide-excision repair"
evidence=IGI] [GO:0019904 "protein domain specific binding"
evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 SGD:S000005785 GO:GO:0005524 GO:GO:0005634
GO:GO:0005737 GO:GO:0019904 EMBL:BK006948 GO:GO:0016887
GO:GO:0030433 GO:GO:0045899 GO:GO:0006289 GO:GO:0032968
RefSeq:NP_014902.3 GeneID:854433 KEGG:sce:YOR259C KO:K03064
GO:GO:0070682 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 GeneTree:ENSGT00550000074826 OMA:EHKEVES
GO:GO:0008540 OrthoDB:EOG40KC79 EMBL:U43720 EMBL:U93262 EMBL:Z75167
PIR:S67156 RefSeq:NP_014904.3 PDB:4B4T PDBsum:4B4T
ProteinModelPortal:P53549 SMR:P53549 DIP:DIP-1589N IntAct:P53549
MINT:MINT-397407 STRING:P53549 PaxDb:P53549 PeptideAtlas:P53549
EnsemblFungi:YOR259C GeneID:854435 KEGG:sce:YOR261C KO:K03038
NextBio:976664 Genevestigator:P53549 GermOnline:YOR259C
Uniprot:P53549
Length = 437
Score = 430 (156.4 bits), Expect = 1.2e-40, Sum P(2) = 1.2e-40
Identities = 96/243 (39%), Positives = 138/243 (56%)
Query: 376 VSFDDIGGLSEYIDALKEMVFFPLLYPDFFASYHITPPRGVLLCGPPGTGKTLIARALAC 435
++FD IGGL+E I L+E++ PL P+ F I PP+GVLL GPPGTGKTL+A+A+A
Sbjct: 178 ITFDGIGGLTEQIRELREVIELPLKNPEIFQRVGIKPPKGVLLYGPPGTGKTLLAKAVAA 237
Query: 436 AASKAGQKVSFYMRKGADVLSKWVGEAERQLKLLFEEAQRNQPSIIFFDEIDGLAPVRSS 495
+F + ++ K++GE+ R ++ +F A+ ++P IIF DE+D + R S
Sbjct: 238 TIG-----ANFIFSPASGIVDKYIGESARIIREMFAYAKEHEPCIIFMDEVDAIGGRRFS 292
Query: 496 KQEQIHNSIVSTLLAL---MDGLDSRGQVVLIGATNRVDAIDGALRRPGRFDREFNFPLP 552
+ I TL+ L MDG D+ GQ +I ATNR D +D AL RPGR DR+ PLP
Sbjct: 293 EGTSADREIQRTLMELLTQMDGFDNLGQTKIIMATNRPDTLDPALLRPGRLDRKVEIPLP 352
Query: 553 GCEARAEILDIHTRKWKQPPSRELKSELAASCVGYCGADLKALCTEAAIRAFREKYPQVY 612
R EI IHT K K+ + ++ + S G+ GAD++ TEA A R+ +
Sbjct: 353 NEAGRLEIFKIHTAKVKKTGEFDFEAAVKMSD-GFNGADIRNCATEAGFFAIRDDRDHIN 411
Query: 613 TSD 615
D
Sbjct: 412 PDD 414
Score = 37 (18.1 bits), Expect = 1.2e-40, Sum P(2) = 1.2e-40
Identities = 13/36 (36%), Positives = 18/36 (50%)
Query: 164 SGDE--QGSSEEKVGQ-DETENGNESDNDADDGQNE 196
SGD Q S E++ Q ETE +E + D + E
Sbjct: 16 SGDNHTQQSHEQQPEQPQETEEHHEEEPSRVDPEQE 51
>SGD|S000002165 [details] [associations]
symbol:RPT2 "ATPase of the 19S regulatory particle of the 26S
proteasome" species:4932 "Saccharomyces cerevisiae" [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA;IDA] [GO:0016887 "ATPase activity"
evidence=IDA] [GO:0070682 "proteasome regulatory particle assembly"
evidence=IMP] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=IMP] [GO:0008540 "proteasome regulatory particle,
base subcomplex" evidence=IDA] [GO:0045732 "positive regulation of
protein catabolic process" evidence=IDA] [GO:0043171 "peptide
catabolic process" evidence=IMP] [GO:0000502 "proteasome complex"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
SGD:S000002165 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
EMBL:BK006938 GO:GO:0016887 GO:GO:0043171 GO:GO:0006511
GO:GO:0045732 EMBL:Z48432 GO:GO:0070682 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 GO:GO:0008540 PDB:4B4T
PDBsum:4B4T KO:K03062 OMA:FIRNQER GeneTree:ENSGT00550000074818
OrthoDB:EOG4FN7S6 EMBL:X81070 EMBL:L17040 EMBL:Z74055 PIR:S46613
RefSeq:NP_010277.1 ProteinModelPortal:P40327 SMR:P40327
DIP:DIP-6282N IntAct:P40327 MINT:MINT-632695 STRING:P40327
PaxDb:P40327 PeptideAtlas:P40327 PRIDE:P40327 EnsemblFungi:YDL007W
GeneID:851557 KEGG:sce:YDL007W NextBio:968983 Genevestigator:P40327
GermOnline:YDL007W Uniprot:P40327
Length = 437
Score = 429 (156.1 bits), Expect = 1.2e-40, Sum P(2) = 1.2e-40
Identities = 98/256 (38%), Positives = 144/256 (56%)
Query: 367 IQPLQVDESV--SFDDIGGLSEYIDALKEMVFFPLLYPDFFASYHITPPRGVLLCGPPGT 424
+ +++D+S S+ DIGGL I +KE V PL +P+ + I PP+GV+L G PGT
Sbjct: 168 VSVMKMDKSPTESYSDIGGLESQIQEIKESVELPLTHPELYEEMGIKPPKGVILYGAPGT 227
Query: 425 GKTLIARALACAASKAGQKVSFYMRKGADVLSKWVGEAERQLKLLFEEAQRNQPSIIFFD 484
GKTL+A+A+A S +F G++++ K++G+ R + +F+ A N PSI+F D
Sbjct: 228 GKTLLAKAVANQTS-----ATFLRIVGSELIQKYLGDGPRLCRQIFKVAGENAPSIVFID 282
Query: 485 EIDGLAPVRSSKQEQIHNSIVSTLLALM---DGLDSRGQVVLIGATNRVDAIDGALRRPG 541
EID + R I T+L L+ DG D RG V +I ATN+++ +D AL RPG
Sbjct: 283 EIDAIGTKRYDSNSGGEREIQRTMLELLNQLDGFDDRGDVKVIMATNKIETLDPALIRPG 342
Query: 542 RFDREFNFPLPGCEARAEILDIHTRKWKQPPSRELKSELAASCVGYCGADLKALCTEAAI 601
R DR+ F P + +IL IHT K L++ L + GAD++A+CTEA +
Sbjct: 343 RIDRKILFENPDLSTKKKILGIHTSKMNLSEDVNLET-LVTTKDDLSGADIQAMCTEAGL 401
Query: 602 RAFREKYPQVYTSDDK 617
A RE+ QV D K
Sbjct: 402 LALRERRMQVTAEDFK 417
Score = 38 (18.4 bits), Expect = 1.2e-40, Sum P(2) = 1.2e-40
Identities = 10/33 (30%), Positives = 20/33 (60%)
Query: 244 SVEEGKQRPRSPRRVLHQG-IGTKVGRDVRKGG 275
S ++ K++ S ++ ++ + +K GR RKGG
Sbjct: 7 SGQDKKKKKGSNQKPKYEPPVQSKFGRKKRKGG 39
>FB|FBgn0039788 [details] [associations]
symbol:Rpt6R "Regulatory particle triple-A ATPase 6-related"
species:7227 "Drosophila melanogaster" [GO:0016887 "ATPase
activity" evidence=ISS] [GO:0008540 "proteasome regulatory
particle, base subcomplex" evidence=ISS] [GO:0006508 "proteolysis"
evidence=ISS] [GO:0030163 "protein catabolic process" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005875 "microtubule associated complex"
evidence=IDA] [GO:0022008 "neurogenesis" evidence=IMP]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
EMBL:AE014297 GO:GO:0005524 GO:GO:0005737 GO:GO:0005875
GO:GO:0022008 GO:GO:0006200 GO:GO:0016887 GO:GO:0030163 HSSP:Q01853
eggNOG:COG1222 TIGRFAMs:TIGR01242 KO:K03066
GeneTree:ENSGT00550000074947 EMBL:AY119229 RefSeq:NP_651811.1
UniGene:Dm.13760 SMR:Q9VA54 IntAct:Q9VA54 MINT:MINT-308887
STRING:Q9VA54 EnsemblMetazoa:FBtr0085680 GeneID:43635
KEGG:dme:Dmel_CG2241 UCSC:CG2241-RA CTD:43635 FlyBase:FBgn0039788
InParanoid:Q9VA54 OMA:NDAYSAG OrthoDB:EOG41JWTK GenomeRNAi:43635
NextBio:834976 Uniprot:Q9VA54
Length = 399
Score = 441 (160.3 bits), Expect = 1.3e-40, P = 1.3e-40
Identities = 98/261 (37%), Positives = 159/261 (60%)
Query: 371 QVDESVSFDDIGGLSEYIDALKEMVFFPLLYPDFFASYHITPPRGVLLCGPPGTGKTLIA 430
+V +S +++ +GGL + I +KE++ P+ +P+ F + IT P+GVLL GPPGTGKTL+A
Sbjct: 136 KVPDS-TYEMVGGLDKQIQEIKEVIELPVKHPELFDALGITQPKGVLLYGPPGTGKTLLA 194
Query: 431 RALACAASKAGQKVSFYMRKGADVLSKWVGEAERQLKLLFEEAQRNQPSIIFFDEIDGLA 490
RA+A + +F G++++ K++GE R ++ LF A+ + PSIIF DEID +
Sbjct: 195 RAVAHHT-----ECTFIRVSGSELVQKFIGEGSRMVRELFVMAREHAPSIIFMDEIDSIG 249
Query: 491 PVR---SSKQEQIHNSIVSTLLALMDGLDSRGQVVLIGATNRVDAIDGALRRPGRFDREF 547
R + ++ +++ LL +DG ++ + +I ATNR+D +D AL RPGR DR+
Sbjct: 250 SARLETGTGDSEVQRTMLE-LLNQLDGFEATKNIKVIMATNRIDVLDQALLRPGRIDRKI 308
Query: 548 NFPLPGCEARAEILDIHTRKWKQPPSRELKSELAASCVGYCGADLKALCTEAAIRAFREK 607
FP P EAR +IL IH+RK L+ ++A G GA++K +CTEA + A RE+
Sbjct: 309 EFPPPNEEARLDILKIHSRKMNLTRGINLR-KIAEEMPGASGAEVKGVCTEAGMYALRER 367
Query: 608 YPQVYTSDDKFLIDVDSVTVE 628
+V+ + + F + V V ++
Sbjct: 368 --RVHVTQEDFEMAVSKVMMK 386
>GENEDB_PFALCIPARUM|PFL2345c [details] [associations]
symbol:PFL2345c "tat-binding protein homolog"
species:5833 "Plasmodium falciparum" [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=ISS]
[GO:0003712 "transcription cofactor activity" evidence=ISS]
[GO:0000502 "proteasome complex" evidence=ISS] [GO:0016887 "ATPase
activity" evidence=ISS] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 EMBL:AE014188
GO:GO:0006511 HSSP:Q01853 GO:GO:0017111 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 KO:K03066 OMA:QNIKVIM ProtClustDB:CLSZ2429412
RefSeq:XP_001350873.1 ProteinModelPortal:Q8I4U5 IntAct:Q8I4U5
MINT:MINT-1544609 PRIDE:Q8I4U5 EnsemblProtists:PFL2345c:mRNA
GeneID:811521 KEGG:pfa:PFL2345c EuPathDB:PlasmoDB:PF3D7_1248900
Uniprot:Q8I4U5
Length = 435
Score = 429 (156.1 bits), Expect = 1.6e-40, Sum P(2) = 1.6e-40
Identities = 98/258 (37%), Positives = 156/258 (60%)
Query: 371 QVDESVSFDDIGGLSEYIDALKEMVFFPLLYPDFFASYHITPPRGVLLCGPPGTGKTLIA 430
+V +S +++ +GGL + + +KE++ P+ +P+ F S I+ P+GVLL GPPGTGKTL+A
Sbjct: 172 KVPDS-TYEMVGGLDQQVKEVKEVIELPVKHPEIFESLGISQPKGVLLYGPPGTGKTLLA 230
Query: 431 RALACAASKAGQKVSFYMRKGADVLSKWVGEAERQLKLLFEEAQRNQPSIIFFDEIDGLA 490
RA+A +VS G++++ K++GE R ++ LF A+ + PSIIF DEID +
Sbjct: 231 RAVAHHTDCTFIRVS-----GSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIG 285
Query: 491 PVRSSKQE---QIHNSIVSTLLALMDGLDSRGQVVLIGATNRVDAIDGALRRPGRFDREF 547
R + ++ +++ LL +DG +S + +I TNR+D +D AL RPGR DR+
Sbjct: 286 SQRIEGEHGDSEVQRTMME-LLNQLDGFESTQNIKVIMCTNRIDILDEALLRPGRIDRKI 344
Query: 548 NFPLPGCEARAEILDIHTRKWKQPPSRELKSELAASCVGYCGADLKALCTEAAIRAFREK 607
FP P EAR EIL IH+RK ++ ++A GA++KA+CTEA + A RE+
Sbjct: 345 EFPNPNVEARMEILKIHSRKMNLMRGIDML-KIATDMNNCSGAEVKAVCTEAGMFALRER 403
Query: 608 YPQVYTSDDKFLIDVDSV 625
+V+ + + F + V V
Sbjct: 404 --RVHVTQEDFEMAVAKV 419
Score = 37 (18.1 bits), Expect = 1.6e-40, Sum P(2) = 1.6e-40
Identities = 7/26 (26%), Positives = 14/26 (53%)
Query: 172 EEKVGQDETENGNESDNDADDGQ-NE 196
+ ++ + EN N +DN+ + NE
Sbjct: 18 KNEISEKNMENNNNNDNNKNSSALNE 43
>UNIPROTKB|Q8I4U5 [details] [associations]
symbol:PFL2345c "Tat-binding protein homolog" species:36329
"Plasmodium falciparum 3D7" [GO:0006511 "ubiquitin-dependent
protein catabolic process" evidence=ISS] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005737 EMBL:AE014188 GO:GO:0006511 HSSP:Q01853 GO:GO:0017111
TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 KO:K03066 OMA:QNIKVIM
ProtClustDB:CLSZ2429412 RefSeq:XP_001350873.1
ProteinModelPortal:Q8I4U5 IntAct:Q8I4U5 MINT:MINT-1544609
PRIDE:Q8I4U5 EnsemblProtists:PFL2345c:mRNA GeneID:811521
KEGG:pfa:PFL2345c EuPathDB:PlasmoDB:PF3D7_1248900 Uniprot:Q8I4U5
Length = 435
Score = 429 (156.1 bits), Expect = 1.6e-40, Sum P(2) = 1.6e-40
Identities = 98/258 (37%), Positives = 156/258 (60%)
Query: 371 QVDESVSFDDIGGLSEYIDALKEMVFFPLLYPDFFASYHITPPRGVLLCGPPGTGKTLIA 430
+V +S +++ +GGL + + +KE++ P+ +P+ F S I+ P+GVLL GPPGTGKTL+A
Sbjct: 172 KVPDS-TYEMVGGLDQQVKEVKEVIELPVKHPEIFESLGISQPKGVLLYGPPGTGKTLLA 230
Query: 431 RALACAASKAGQKVSFYMRKGADVLSKWVGEAERQLKLLFEEAQRNQPSIIFFDEIDGLA 490
RA+A +VS G++++ K++GE R ++ LF A+ + PSIIF DEID +
Sbjct: 231 RAVAHHTDCTFIRVS-----GSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIG 285
Query: 491 PVRSSKQE---QIHNSIVSTLLALMDGLDSRGQVVLIGATNRVDAIDGALRRPGRFDREF 547
R + ++ +++ LL +DG +S + +I TNR+D +D AL RPGR DR+
Sbjct: 286 SQRIEGEHGDSEVQRTMME-LLNQLDGFESTQNIKVIMCTNRIDILDEALLRPGRIDRKI 344
Query: 548 NFPLPGCEARAEILDIHTRKWKQPPSRELKSELAASCVGYCGADLKALCTEAAIRAFREK 607
FP P EAR EIL IH+RK ++ ++A GA++KA+CTEA + A RE+
Sbjct: 345 EFPNPNVEARMEILKIHSRKMNLMRGIDML-KIATDMNNCSGAEVKAVCTEAGMFALRER 403
Query: 608 YPQVYTSDDKFLIDVDSV 625
+V+ + + F + V V
Sbjct: 404 --RVHVTQEDFEMAVAKV 419
Score = 37 (18.1 bits), Expect = 1.6e-40, Sum P(2) = 1.6e-40
Identities = 7/26 (26%), Positives = 14/26 (53%)
Query: 172 EEKVGQDETENGNESDNDADDGQ-NE 196
+ ++ + EN N +DN+ + NE
Sbjct: 18 KNEISEKNMENNNNNDNNKNSSALNE 43
>DICTYBASE|DDB_G0292382 [details] [associations]
symbol:psmC5 "HIV TAT binding-protein-related"
species:44689 "Dictyostelium discoideum" [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0006508 "proteolysis"
evidence=ISS] [GO:0005838 "proteasome regulatory particle"
evidence=ISS] [GO:0004175 "endopeptidase activity" evidence=ISS]
[GO:0005634 "nucleus" evidence=IEA] [GO:0000502 "proteasome
complex" evidence=IEA] [GO:0044351 "macropinocytosis" evidence=RCA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
dictyBase:DDB_G0292382 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GenomeReviews:CM000155_GR GO:GO:0006508 GO:GO:0004175 GO:GO:0030163
GO:GO:0017111 EMBL:AAFI02000190 eggNOG:COG1222 TIGRFAMs:TIGR01242
GO:GO:0005838 KO:K03066 EMBL:L16579 PIR:JN0610 RefSeq:XP_629632.1
ProteinModelPortal:P34124 STRING:P34124 EnsemblProtists:DDB0216230
GeneID:8628696 KEGG:ddi:DDB_G0292382 OMA:RAALKHE
ProtClustDB:CLSZ2429412 Uniprot:P34124
Length = 403
Score = 439 (159.6 bits), Expect = 2.1e-40, P = 2.1e-40
Identities = 102/253 (40%), Positives = 150/253 (59%)
Query: 377 SFDDIGGLSEYIDALKEMVFFPLLYPDFFASYHITPPRGVLLCGPPGTGKTLIARALACA 436
++D +GGL + I +KE++ P+ +P+ F S I P+GVLL GPPGTGKTL+ARA+A
Sbjct: 143 TYDMVGGLDKQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHH 202
Query: 437 ASKAGQKVSFYMRKGADVLSKWVGEAERQLKLLFEEAQRNQPSIIFFDEIDGLAPVRSSK 496
+VS G++++ K++GE R ++ LF A+ + PSIIF DEID + R
Sbjct: 203 TDCTFIRVS-----GSELVQKYIGEGSRMVRELFIMAREHAPSIIFMDEIDSIGSSRGES 257
Query: 497 QEQIHNSIVS-TLLALM---DGLDSRGQVVLIGATNRVDAIDGALRRPGRFDREFNFPLP 552
+S V T+L L+ DG +S + ++ TNR+D +D AL RPGR DR+ FP P
Sbjct: 258 GSGGGDSEVQRTMLELLNQLDGFESTKNIKVLMCTNRIDILDPALLRPGRIDRKIEFPNP 317
Query: 553 GCEARAEILDIHTRKWKQPPSRELKSELAASCVGYCGADLKALCTEAAIRAFREKYPQVY 612
G R +IL IH+RK LK +++ G GA+LKA+CTEA + A RE+ +V+
Sbjct: 318 GDAGRLDILKIHSRKMNLTRGINLK-KISDKMNGASGAELKAVCTEAGMYALRER--RVH 374
Query: 613 TSDDKFLIDVDSV 625
S + F + V V
Sbjct: 375 VSQEDFEMAVSKV 387
>FB|FBgn0028685 [details] [associations]
symbol:Rpt4 "Regulatory particle triple-A ATPase 4"
species:7227 "Drosophila melanogaster" [GO:0008540 "proteasome
regulatory particle, base subcomplex" evidence=ISS;NAS] [GO:0006508
"proteolysis" evidence=ISS;IDA] [GO:0004175 "endopeptidase
activity" evidence=IDA] [GO:0005838 "proteasome regulatory
particle" evidence=ISS;IDA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005875 "microtubule associated
complex" evidence=IDA] [GO:0022008 "neurogenesis" evidence=IMP]
[GO:1901838 "positive regulation of transcription of nuclear large
rRNA transcript from RNA polymerase I promoter" evidence=IMP]
[GO:0005634 "nucleus" evidence=IDA] [GO:0001163 "RNA polymerase I
regulatory region sequence-specific DNA binding" evidence=IDA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005737 GO:GO:0005875 GO:GO:0022008
GO:GO:0006508 GO:GO:0016887 GO:GO:0004175 GO:GO:0030163 HSSP:Q01853
TIGRFAMs:TIGR01242 GO:GO:0008540 EMBL:AY071182
ProteinModelPortal:Q8SZ19 SMR:Q8SZ19 IntAct:Q8SZ19 STRING:Q8SZ19
PRIDE:Q8SZ19 FlyBase:FBgn0028685 InParanoid:Q8SZ19
OrthoDB:EOG43TX9X ChiTaRS:Rpt4 ArrayExpress:Q8SZ19 Bgee:Q8SZ19
Uniprot:Q8SZ19
Length = 397
Score = 439 (159.6 bits), Expect = 2.1e-40, P = 2.1e-40
Identities = 106/257 (41%), Positives = 149/257 (57%)
Query: 376 VSFDDIGGLSEYIDALKEMVFFPLLYPDFFASYHITPPRGVLLCGPPGTGKTLIARALAC 435
V++ IGGL++ I L+E++ PLL P+ F ITPP+G LL GPPGTGKTL+ARA+A
Sbjct: 138 VTYSAIGGLTDQIRELREVIELPLLNPELFLRVGITPPKGCLLYGPPGTGKTLLARAVAS 197
Query: 436 AASKAGQKVSFYMRKGADVLSKWVGEAERQLKLLFEEAQRNQPSIIFFDEIDGLAPVRSS 495
+F + ++ K++GE+ R ++ +F A+ +QP IIF DEID + R S
Sbjct: 198 QLD-----ANFLKVVSSAIVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGGRRFS 252
Query: 496 KQEQIHNSIVSTLLAL---MDGLDSRGQVVLIGATNRVDAIDGALRRPGRFDREFNFPLP 552
+ I TL+ L MDG DS GQV +I ATNR D++D AL RPGR DR+ PLP
Sbjct: 253 EGTSADREIQRTLMELLNQMDGFDSLGQVKMIMATNRPDSLDPALLRPGRLDRKIEIPLP 312
Query: 553 GCEARAEILDIHTRKWKQPPSRELKSELAASCVGYCGADLKALCTEAAIRAFREKYPQVY 612
+AR EIL IH K + + ++ + S + GADL+ +CTEA + A R + V
Sbjct: 313 NEQARLEILKIHALKIAKHGEIDYEAIVKLSD-NFNGADLRNVCTEAGLFAIRAEREYVI 371
Query: 613 TSDDKFLIDVDSVTVEK 629
D F+ V V+ K
Sbjct: 372 QGD--FMKAVRKVSDNK 386
>TAIR|locus:2119926 [details] [associations]
symbol:RPT2a "regulatory particle AAA-ATPase 2A"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM;TAS] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=IGI;ISS] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=RCA;TAS]
[GO:0009933 "meristem structural organization" evidence=IMP]
[GO:0009965 "leaf morphogenesis" evidence=IMP] [GO:0010015 "root
morphogenesis" evidence=IMP] [GO:0010078 "maintenance of root
meristem identity" evidence=IMP] [GO:0010311 "lateral root
formation" evidence=IMP] [GO:0035266 "meristem growth"
evidence=IMP] [GO:0048367 "shoot system development" evidence=IMP]
[GO:0048827 "phyllome development" evidence=IMP] [GO:0048829 "root
cap development" evidence=IMP] [GO:0046686 "response to cadmium
ion" evidence=IEP;RCA] [GO:0016020 "membrane" evidence=IDA]
[GO:0009408 "response to heat" evidence=IMP] [GO:0043161
"proteasomal ubiquitin-dependent protein catabolic process"
evidence=RCA;IMP] [GO:0043248 "proteasome assembly"
evidence=RCA;IMP] [GO:0048364 "root development" evidence=IMP]
[GO:0051788 "response to misfolded protein" evidence=RCA;IMP]
[GO:0080129 "proteasome core complex assembly" evidence=RCA;IMP]
[GO:0000502 "proteasome complex" evidence=IDA] [GO:0005829
"cytosol" evidence=RCA] [GO:0007292 "female gamete generation"
evidence=IGI] [GO:0048232 "male gamete generation" evidence=IGI]
[GO:0090351 "seedling development" evidence=IMP] [GO:0006094
"gluconeogenesis" evidence=RCA] [GO:0006096 "glycolysis"
evidence=RCA] [GO:0006635 "fatty acid beta-oxidation" evidence=RCA]
[GO:0009407 "toxin catabolic process" evidence=RCA] [GO:0009651
"response to salt stress" evidence=RCA] [GO:0009853
"photorespiration" evidence=RCA] [GO:0042023 "DNA
endoreduplication" evidence=RCA] [GO:0051510 "regulation of
unidimensional cell growth" evidence=RCA] [GO:0060968 "regulation
of gene silencing" evidence=IMP] [GO:0008540 "proteasome regulatory
particle, base subcomplex" evidence=IDA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0046686 EMBL:CP002687
GenomeReviews:CT486007_GR GO:GO:0043161 GO:GO:0016020 EMBL:AL078470
EMBL:AL161574 GO:GO:0009408 GO:GO:0010311 GO:GO:0048829
GO:GO:0000502 GO:GO:0043248 GO:GO:0017111 GO:GO:0009965
GO:GO:0009933 EMBL:AL078469 GO:GO:0007292 GO:GO:0060968
GO:GO:0010078 HSSP:P43773 GO:GO:0051788 GO:GO:0090351 GO:GO:0048232
eggNOG:COG1222 TIGRFAMs:TIGR01242 HOGENOM:HOG000225143
EMBL:AF123391 EMBL:AB161192 EMBL:AY034975 IPI:IPI00538666
PIR:T08959 RefSeq:NP_194633.1 UniGene:At.24596
ProteinModelPortal:Q9SZD4 SMR:Q9SZD4 IntAct:Q9SZD4 STRING:Q9SZD4
PaxDb:Q9SZD4 PRIDE:Q9SZD4 EnsemblPlants:AT4G29040.1 GeneID:829025
KEGG:ath:AT4G29040 GeneFarm:1494 TAIR:At4g29040 InParanoid:Q9SZD4
KO:K03062 OMA:SAIVMEA PhylomeDB:Q9SZD4 ProtClustDB:CLSN2683303
GO:GO:0035266 Uniprot:Q9SZD4
Length = 443
Score = 438 (159.2 bits), Expect = 2.6e-40, P = 2.6e-40
Identities = 99/244 (40%), Positives = 140/244 (57%)
Query: 377 SFDDIGGLSEYIDALKEMVFFPLLYPDFFASYHITPPRGVLLCGPPGTGKTLIARALACA 436
S+ DIGGL I +KE V PL +P+ + I PP+GV+L G PGTGKTL+A+A+A +
Sbjct: 186 SYADIGGLEAQIQEIKEAVELPLTHPELYEDIGIKPPKGVILYGEPGTGKTLLAKAVANS 245
Query: 437 ASKAGQKVSFYMRKGADVLSKWVGEAERQLKLLFEEAQRNQPSIIFFDEIDGLAPVRSSK 496
S +F G++++ K++G+ + ++ LF A PSI+F DEID + R
Sbjct: 246 TS-----ATFLRVVGSELIQKYLGDGPKLVRELFRVADDLSPSIVFIDEIDAVGTKRYDA 300
Query: 497 QEQIHNSIVSTLLALM---DGLDSRGQVVLIGATNRVDAIDGALRRPGRFDREFNFPLPG 553
I T+L L+ DG DSRG V +I ATNR++++D AL RPGR DR+ FPLP
Sbjct: 301 HSGGEREIQRTMLELLNQLDGFDSRGDVKVILATNRIESLDPALLRPGRIDRKIEFPLPD 360
Query: 554 CEARAEILDIHTRKWKQPPSRELKSELAASCVGYCGADLKALCTEAAIRAFREKYPQVYT 613
+ R I IHT K L+ E + + GAD+KA+CTEA + A RE+ +V
Sbjct: 361 IKTRRRIFQIHTSKMTLSEDVNLE-EFVMTKDEFSGADIKAICTEAGLLALRERRMKVTH 419
Query: 614 SDDK 617
D K
Sbjct: 420 PDFK 423
>UNIPROTKB|P96281 [details] [associations]
symbol:Rv0435c "Transitional endoplasmic reticulum ATPase"
species:83332 "Mycobacterium tuberculosis H37Rv" [GO:0005618 "cell
wall" evidence=IDA] [GO:0005886 "plasma membrane" evidence=IDA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 InterPro:IPR003338
Pfam:PF02359 GO:GO:0005886 GO:GO:0005524 GO:GO:0005618
GO:GO:0051301 GenomeReviews:AE000516_GR GenomeReviews:AL123456_GR
EMBL:BX842573 HSSP:Q01853 HOGENOM:HOG000223225 GO:GO:0017111
Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692 KO:K13525
SMART:SM01073 EMBL:CP003248 PIR:A70632 RefSeq:NP_214949.1
RefSeq:NP_334860.1 RefSeq:YP_006513761.1 SMR:P96281
EnsemblBacteria:EBMYCT00000001241 EnsemblBacteria:EBMYCT00000071017
GeneID:13318302 GeneID:886352 GeneID:923768 KEGG:mtc:MT0451
KEGG:mtu:Rv0435c KEGG:mtv:RVBD_0435c PATRIC:18122702
TubercuList:Rv0435c OMA:KTHGFAG ProtClustDB:CLSK871802
Uniprot:P96281
Length = 728
Score = 456 (165.6 bits), Expect = 3.3e-40, P = 3.3e-40
Identities = 112/266 (42%), Positives = 153/266 (57%)
Query: 342 HQGDTLAALTSGIQTAGPSSKGGADIQPLQVDESVSFDDIGGLSEYIDALKEMVFFPLLY 401
HQ D L ALT P S+ +D + V + V+ DD+G ++ AL E V +PL +
Sbjct: 434 HQDDLLGALT----VIRPLSRSASD--EVTVGD-VTLDDVGDMAAAKQALTEAVLWPLQH 486
Query: 402 PDFFASYHITPPRGVLLCGPPGTGKTLIARALACAASKAGQKVSFYMRKGADVLSKWVGE 461
PD FA + PPRGVLL GPPG GKT + RALA GQ +S + KG++++ KWVG
Sbjct: 487 PDTFARLGVEPPRGVLLYGPPGCGKTFVVRALA----STGQ-LSVHAVKGSELMDKWVGS 541
Query: 462 AERQLKLLFEEAQRNQPSIIFFDEIDGLAPVRSSKQEQ-IHNSIVSTLLALMDGLDSRGQ 520
+E+ ++ LF A+ + PS++F DE+D LAP R + + + +V+ LL +DG+D
Sbjct: 542 SEKAVRELFRRARDSAPSLVFLDELDALAPRRGQSFDSGVSDRVVAALLTELDGIDPLRD 601
Query: 521 VVLIGATNRVDAIDGALRRPGRFDREFNFPLPGCEARAEILDIHTRKWKQPPSRELK-SE 579
VV++GATNR D ID AL RPGR +R P AR EIL T P S ++ E
Sbjct: 602 VVMLGATNRPDLIDPALLRPGRLERLVFVEPPDAAARREIL--RTAGKSIPLSSDVDLDE 659
Query: 580 LAASCVGYCGADLKALCTEAAIRAFR 605
+AA GY AD AL EAA+ A R
Sbjct: 660 VAAGLDGYSAADCVALLREAALTAMR 685
Score = 169 (64.5 bits), Expect = 1.6e-09, Sum P(2) = 1.6e-09
Identities = 65/250 (26%), Positives = 110/250 (44%)
Query: 357 AG-PSSKGGADIQPLQVDE-SVSFDDIGGLSEYIDALKEMVFFPLLYPDFFASYHITPPR 414
AG P++ G + + + + +++ G L E + L P +
Sbjct: 189 AGVPAAMGTSTAGQVSISSPEIQIEELKGAQPQAAKLTEWLKLALDEPHLLQTLGAGTNL 248
Query: 415 GVLLCGPPGTGKTLIARALACAASKAGQKVSFYMRKGADVLSKWVGEAERQLKLLFEEAQ 474
GVL+ GP G GK + RA+ C G+++ G ++ + G+ + + + A
Sbjct: 249 GVLVSGPAGVGKATLVRAV-CD----GRRL--VTLDGPEIGALAAGDRVKAVASAVQ-AV 300
Query: 475 RNQPSIIFFDEIDGLAPVRSSKQEQIHNSIVSTLLALMDGLDSRGQVVLIGATNRVDAID 534
R++ ++ + D L P + E + + I+S L + + VVLI + R D +D
Sbjct: 301 RHEGGVLLITDADALLPAAA---EPVASLILSELRTAV----ATAGVVLIATSARPDQLD 353
Query: 535 GALRRPGRFDREFNFPLPGCEARAEILDIHTRKWKQPPSRELK-SELAASCVGYCGADLK 593
LR P DRE PLP R +L+ P+ +L E+A+ G+ ADL
Sbjct: 354 ARLRSPELCDRELGLPLPDAATRKSLLEALLNP---VPTGDLNLDEIASRTPGFVVADLA 410
Query: 594 ALCTEAAIRA 603
AL EAA+RA
Sbjct: 411 ALVREAALRA 420
Score = 57 (25.1 bits), Expect = 1.6e-09, Sum P(2) = 1.6e-09
Identities = 20/72 (27%), Positives = 37/72 (51%)
Query: 704 PR-LLLCGSEGTGVDHLGPAILHELEKFPVHSLGLPALLSDPSAKTPEEALVHIFGEARR 762
PR +LL G G G + A L + VH++ L+ D + E+A+ +F AR
Sbjct: 498 PRGVLLYGPPGCGKTFVVRA-LASTGQLSVHAVKGSELM-DKWVGSSEKAVRELFRRARD 555
Query: 763 TTPSILYIPQFN 774
+ PS++++ + +
Sbjct: 556 SAPSLVFLDELD 567
>TAIR|locus:2061639 [details] [associations]
symbol:RPT2b "regulatory particle AAA-ATPase 2b"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0005886 "plasma
membrane" evidence=IDA] [GO:0000502 "proteasome complex"
evidence=IDA] [GO:0005829 "cytosol" evidence=IDA] [GO:0007292
"female gamete generation" evidence=IGI] [GO:0010078 "maintenance
of root meristem identity" evidence=IMP] [GO:0048232 "male gamete
generation" evidence=IGI] [GO:0042023 "DNA endoreduplication"
evidence=RCA] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=RCA] [GO:0043248 "proteasome assembly"
evidence=RCA] [GO:0051510 "regulation of unidimensional cell
growth" evidence=RCA] [GO:0051788 "response to misfolded protein"
evidence=RCA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005829 GO:GO:0005886 GO:GO:0005524
GO:GO:0005634 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0030163
GO:GO:0000502 GO:GO:0017111 EMBL:AC006081 GO:GO:0007292
GO:GO:0010078 HSSP:P43773 GO:GO:0048232 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 UniGene:At.24596 KO:K03062
ProtClustDB:CLSN2683303 EMBL:AF372977 EMBL:AY035072 EMBL:AY056335
EMBL:AY087584 IPI:IPI00521093 PIR:E84585 RefSeq:NP_179604.1
UniGene:At.13496 ProteinModelPortal:Q9SL67 SMR:Q9SL67 IntAct:Q9SL67
STRING:Q9SL67 PaxDb:Q9SL67 PRIDE:Q9SL67 EnsemblPlants:AT2G20140.1
GeneID:816533 KEGG:ath:AT2G20140 GeneFarm:1495 TAIR:At2g20140
InParanoid:Q9SL67 OMA:FIRNQER PhylomeDB:Q9SL67 Uniprot:Q9SL67
Length = 443
Score = 437 (158.9 bits), Expect = 3.4e-40, P = 3.4e-40
Identities = 99/244 (40%), Positives = 140/244 (57%)
Query: 377 SFDDIGGLSEYIDALKEMVFFPLLYPDFFASYHITPPRGVLLCGPPGTGKTLIARALACA 436
S+ DIGGL I +KE V PL +P+ + I PP+GV+L G PGTGKTL+A+A+A +
Sbjct: 186 SYADIGGLEAQIQEIKEAVELPLTHPELYEDIGIKPPKGVILYGEPGTGKTLLAKAVANS 245
Query: 437 ASKAGQKVSFYMRKGADVLSKWVGEAERQLKLLFEEAQRNQPSIIFFDEIDGLAPVRSSK 496
S +F G++++ K++G+ + ++ LF A PSI+F DEID + R
Sbjct: 246 TS-----ATFLRVVGSELIQKYLGDGPKLVRELFRVADDLSPSIVFIDEIDAVGTKRYDA 300
Query: 497 QEQIHNSIVSTLLALM---DGLDSRGQVVLIGATNRVDAIDGALRRPGRFDREFNFPLPG 553
I T+L L+ DG DSRG V +I ATNR++++D AL RPGR DR+ FPLP
Sbjct: 301 NSGGEREIQRTMLELLNQLDGFDSRGDVKVILATNRIESLDPALLRPGRIDRKIEFPLPD 360
Query: 554 CEARAEILDIHTRKWKQPPSRELKSELAASCVGYCGADLKALCTEAAIRAFREKYPQVYT 613
+ R I IHT K L+ E + + GAD+KA+CTEA + A RE+ +V
Sbjct: 361 IKTRRRIFQIHTSKMTLAEDVNLE-EFVMTKDEFSGADIKAICTEAGLLALRERRMKVTH 419
Query: 614 SDDK 617
D K
Sbjct: 420 VDFK 423
>CGD|CAL0005689 [details] [associations]
symbol:RPT1 species:5476 "Candida albicans" [GO:0005634
"nucleus" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0008540 "proteasome regulatory particle, base subcomplex"
evidence=IEA] [GO:0070682 "proteasome regulatory particle assembly"
evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0045899 "positive regulation of RNA
polymerase II transcriptional preinitiation complex assembly"
evidence=IEA] [GO:0045732 "positive regulation of protein catabolic
process" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 CGD:CAL0005689 GO:GO:0005524 GO:GO:0005737
GO:GO:0030163 GO:GO:0017111 EMBL:AACQ01000078 EMBL:AACQ01000077
eggNOG:COG1222 TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 KO:K03061
RefSeq:XP_715876.1 RefSeq:XP_715926.1 ProteinModelPortal:Q5A2A0
STRING:Q5A2A0 GeneID:3642412 GeneID:3642461 KEGG:cal:CaO19.441
KEGG:cal:CaO19.8071 Uniprot:Q5A2A0
Length = 444
Score = 436 (158.5 bits), Expect = 4.3e-40, P = 4.3e-40
Identities = 104/262 (39%), Positives = 151/262 (57%)
Query: 370 LQVDES--VSFDDIGGLSEYIDALKEMVFFPLLYPDFFASYHITPPRGVLLCGPPGTGKT 427
+ V+E V++ D+GG E I+ L+E+V PLL P+ F I PP+G+LL GPPGTGKT
Sbjct: 175 MTVEEKPDVTYSDVGGCKEQIEKLREVVELPLLSPERFVKLGIDPPKGILLYGPPGTGKT 234
Query: 428 LIARALACAASKAGQKVSFYMRKGADVLSKWVGEAERQLKLLFEEAQRNQPSIIFFDEID 487
L ARA+A +F G++++ K+VGE R ++ LFE A+ + IIFFDE+D
Sbjct: 235 LCARAVANRTD-----ATFIRVIGSELVQKYVGEGARMVRELFEMARTKKACIIFFDEVD 289
Query: 488 GLAPVRSSKQEQIHNSIVSTLLAL---MDGLDSRGQVVLIGATNRVDAIDGALRRPGRFD 544
+ R N + T+L L +DG D RG + ++ ATNR + +D AL RPGR D
Sbjct: 290 AIGGARFDDGAGGDNEVQRTMLELITQLDGFDPRGNIKVMFATNRPNTLDPALLRPGRID 349
Query: 545 REFNFPLPGCEARAEILDIHTRKWKQPPSRELKSELAAS-CVGYCGADLKALCTEAAIRA 603
R+ F LP E RA I IH++ ++++ EL + C GA+L+++CTEA + A
Sbjct: 350 RKVEFSLPDLEGRANIFRIHSKTMSV--EKDIRWELISRLCPNATGAELRSVCTEAGMFA 407
Query: 604 FREKYPQVYTSDDKFLIDVDSV 625
R + +V D FL VD V
Sbjct: 408 IRARR-KVANEKD-FLKAVDKV 427
>WB|WBGene00004504 [details] [associations]
symbol:rpt-4 species:6239 "Caenorhabditis elegans"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0006310 "DNA recombination" evidence=IEA]
[GO:0009378 "four-way junction helicase activity" evidence=IEA]
[GO:0040010 "positive regulation of growth rate" evidence=IMP]
[GO:0009792 "embryo development ending in birth or egg hatching"
evidence=IMP] [GO:0010171 "body morphogenesis" evidence=IMP]
[GO:0040011 "locomotion" evidence=IMP] [GO:0000003 "reproduction"
evidence=IMP] [GO:0002119 "nematode larval development"
evidence=IMP] [GO:0008340 "determination of adult lifespan"
evidence=IMP] [GO:0008540 "proteasome regulatory particle, base
subcomplex" evidence=ISS] [GO:0005515 "protein binding"
evidence=IPI] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0008340
GO:GO:0009792 GO:GO:0005737 GO:GO:0040010 GO:GO:0002119
GO:GO:0010171 GO:GO:0040011 GO:GO:0000003 GO:GO:0030163
GO:GO:0017111 KO:K03064 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 EMBL:FO080251 PIR:T32268 RefSeq:NP_001022113.1
RefSeq:NP_001022114.1 ProteinModelPortal:O17071 SMR:O17071
IntAct:O17071 MINT:MINT-210603 STRING:O17071 PaxDb:O17071
PRIDE:O17071 EnsemblMetazoa:F23F1.8a GeneID:173384
KEGG:cel:CELE_F23F1.8 UCSC:F23F1.8a CTD:173384 WormBase:F23F1.8a
WormBase:F23F1.8b GeneTree:ENSGT00550000074826 InParanoid:O17071
OMA:EHKEVES NextBio:879415 GO:GO:0008540 Uniprot:O17071
Length = 406
Score = 436 (158.5 bits), Expect = 4.3e-40, P = 4.3e-40
Identities = 100/254 (39%), Positives = 150/254 (59%)
Query: 375 SVSFDDIGGLSEYIDALKEMVFFPLLYPDFFASYHITPPRGVLLCGPPGTGKTLIARALA 434
++S+ D+GGL+E I L+E+V PL+ P+ F ITPP+G LL GPPGTGKTL+ARA+A
Sbjct: 146 NISYSDVGGLAEQIRELREVVELPLINPELFKRVGITPPKGCLLFGPPGTGKTLLARAVA 205
Query: 435 CAASKAGQKVSFYMRKGADVLSKWVGEAERQLKLLFEEAQRNQPSIIFFDEIDGLAPVRS 494
+F + ++ K++GE+ R ++ +F A+ +QP I+F DEID + R
Sbjct: 206 SQLD-----CNFLKVVSSAIVDKYIGESARMIREMFNYARDHQPCIVFMDEIDAIGGRRF 260
Query: 495 SKQEQIHNSIVSTLLALM---DGLDSRGQVVLIGATNRVDAIDGALRRPGRFDREFNFPL 551
S+ I TL+ L+ DG DS G+V +I ATNR D +D AL RPGR DR+ L
Sbjct: 261 SEGTSADREIQRTLMELLNQLDGFDSLGKVKVIMATNRPDTLDPALLRPGRLDRKIEIGL 320
Query: 552 PGCEARAEILDIHTRKWKQPPSRELKSELAASCVGYCGADLKALCTEAAIRAFREKYPQV 611
P ++R EIL IH+ K + + ++ + S G+ ADL+ +CTEA + A R + +
Sbjct: 321 PNEQSRLEILKIHSNKITKHGEIDFEAVVKLSD-GFSAADLRNVCTEAGMFAIRAE--RE 377
Query: 612 YTSDDKFLIDVDSV 625
+ D+ F+ V V
Sbjct: 378 FVIDEDFMKAVRKV 391
>UNIPROTKB|O17071 [details] [associations]
symbol:rpt-4 "Probable 26S protease regulatory subunit 10B"
species:6239 "Caenorhabditis elegans" [GO:0042802 "identical
protein binding" evidence=IPI] [GO:0005515 "protein binding"
evidence=IPI] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0008340
GO:GO:0009792 GO:GO:0005737 GO:GO:0040010 GO:GO:0002119
GO:GO:0010171 GO:GO:0040011 GO:GO:0000003 GO:GO:0030163
GO:GO:0017111 KO:K03064 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 EMBL:FO080251 PIR:T32268 RefSeq:NP_001022113.1
RefSeq:NP_001022114.1 ProteinModelPortal:O17071 SMR:O17071
IntAct:O17071 MINT:MINT-210603 STRING:O17071 PaxDb:O17071
PRIDE:O17071 EnsemblMetazoa:F23F1.8a GeneID:173384
KEGG:cel:CELE_F23F1.8 UCSC:F23F1.8a CTD:173384 WormBase:F23F1.8a
WormBase:F23F1.8b GeneTree:ENSGT00550000074826 InParanoid:O17071
OMA:EHKEVES NextBio:879415 GO:GO:0008540 Uniprot:O17071
Length = 406
Score = 436 (158.5 bits), Expect = 4.3e-40, P = 4.3e-40
Identities = 100/254 (39%), Positives = 150/254 (59%)
Query: 375 SVSFDDIGGLSEYIDALKEMVFFPLLYPDFFASYHITPPRGVLLCGPPGTGKTLIARALA 434
++S+ D+GGL+E I L+E+V PL+ P+ F ITPP+G LL GPPGTGKTL+ARA+A
Sbjct: 146 NISYSDVGGLAEQIRELREVVELPLINPELFKRVGITPPKGCLLFGPPGTGKTLLARAVA 205
Query: 435 CAASKAGQKVSFYMRKGADVLSKWVGEAERQLKLLFEEAQRNQPSIIFFDEIDGLAPVRS 494
+F + ++ K++GE+ R ++ +F A+ +QP I+F DEID + R
Sbjct: 206 SQLD-----CNFLKVVSSAIVDKYIGESARMIREMFNYARDHQPCIVFMDEIDAIGGRRF 260
Query: 495 SKQEQIHNSIVSTLLALM---DGLDSRGQVVLIGATNRVDAIDGALRRPGRFDREFNFPL 551
S+ I TL+ L+ DG DS G+V +I ATNR D +D AL RPGR DR+ L
Sbjct: 261 SEGTSADREIQRTLMELLNQLDGFDSLGKVKVIMATNRPDTLDPALLRPGRLDRKIEIGL 320
Query: 552 PGCEARAEILDIHTRKWKQPPSRELKSELAASCVGYCGADLKALCTEAAIRAFREKYPQV 611
P ++R EIL IH+ K + + ++ + S G+ ADL+ +CTEA + A R + +
Sbjct: 321 PNEQSRLEILKIHSNKITKHGEIDFEAVVKLSD-GFSAADLRNVCTEAGMFAIRAE--RE 377
Query: 612 YTSDDKFLIDVDSV 625
+ D+ F+ V V
Sbjct: 378 FVIDEDFMKAVRKV 391
>DICTYBASE|DDB_G0282241 [details] [associations]
symbol:DDB_G0282241 species:44689 "Dictyostelium
discoideum" [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 dictyBase:DDB_G0282241 GO:GO:0005524 eggNOG:COG0464
GO:GO:0017111 EMBL:AAFI02000046 RefSeq:XP_640304.1
ProteinModelPortal:Q54ST1 EnsemblProtists:DDB0205288 GeneID:8623480
KEGG:ddi:DDB_G0282241 InParanoid:Q54ST1 OMA:IEMISID Uniprot:Q54ST1
Length = 825
Score = 457 (165.9 bits), Expect = 4.8e-40, P = 4.8e-40
Identities = 133/407 (32%), Positives = 206/407 (50%)
Query: 381 IGGLSEYIDALKEMVFFPLLYPDFFASYHITPPRGVLLCGPPGTGKTLIARALACAASKA 440
IGGL+E I L+EM+ +P+L+P F + +I PP+G+LL GPPGTGKT + R + C A
Sbjct: 289 IGGLNEQIKLLEEMMIYPILFPQVFKTLNIDPPKGILLKGPPGTGKTHLVRTV-CDAYDI 347
Query: 441 GQKVSFYMRKGADVLSKWVGEAERQLKLLFEEA------QRNQPSIIFFDEIDGLAPVRS 494
+ +S K + ++GE E L+ +F+EA + N P ++F DEID + P RS
Sbjct: 348 -EMISIDCAK---ISGSYIGETEENLRNIFQEASDKSIAKSNSPIVVFIDEIDTICPPRS 403
Query: 495 SKQEQIHNSIVSTLLALMDGLDSR-GQVVLIGATNRVDAIDGALRRPGRFDREFNFPLPG 553
K Q + +V L L+DG+ +R G +++I ATNR + ID ALRRPGR DRE P+P
Sbjct: 404 -KSTQNESRVVGQFLTLLDGIGARKGNLIIIAATNRPNQIDNALRRPGRLDREIEIPVPN 462
Query: 554 CEARAEILDIHTRKWK-QPPSRELKSELAASCVGYCGADLKALCTEAAIRAFREKYPQV- 611
+ R +IL ++ K P L ++A VGY GA+++ LC ++A AF KY +
Sbjct: 463 KQQRLDILKLYCSKLPISPTPSNLLDQIADETVGYVGANIQFLCRDSAFIAF-SKYNLLK 521
Query: 612 YTSDDKFLIDVDSVTVEKYHFIEAMSTITPAAHRGATVHSRPLSLVVAPCLQRHLQKA-- 669
Y ++++ + EK + IE R ++ + P S++ L ++
Sbjct: 522 YQNNEQ-----NENENEKKYLIEIED------FR-ESIKNNPASILKGEHLVENISNVSW 569
Query: 670 --MNYISDIFPPLGMSSELTKLCMLSHGSAIPLVYRPRLLLCGSEGTGVDHLGPAILHEL 727
+ + DI L + E L S L ++L G G L A+
Sbjct: 570 DDIGGLDDIKEELRQAIEWPNLYKESF-EKFGLSPPKGIILYGPPGCSKTTLVKAVASS- 627
Query: 728 EKFPVHSLGLPALLSDPSAKTPEEALVHIFGEARRTTPSILYIPQFN 774
K SL + S P E+ + IF +AR+TTPSIL+ + +
Sbjct: 628 SKLSFLSLSGATIFS-PYLGDSEQTIRDIFKKARQTTPSILFFDEID 673
Score = 421 (153.3 bits), Expect = 4.6e-36, P = 4.6e-36
Identities = 89/235 (37%), Positives = 147/235 (62%)
Query: 375 SVSFDDIGGLSEYIDALKEMVFFPLLYPDFFASYHITPPRGVLLCGPPGTGKTLIARALA 434
+VS+DDIGGL + + L++ + +P LY + F + ++PP+G++L GPPG KT + +A+A
Sbjct: 566 NVSWDDIGGLDDIKEELRQAIEWPNLYKESFEKFGLSPPKGIILYGPPGCSKTTLVKAVA 625
Query: 435 CAASKAGQKVSFYMRKGADVLSKWVGEAERQLKLLFEEAQRNQPSIIFFDEIDGLAPVRS 494
++ K+SF GA + S ++G++E+ ++ +F++A++ PSI+FFDEID + R+
Sbjct: 626 SSS-----KLSFLSLSGATIFSPYLGDSEQTIRDIFKKARQTTPSILFFDEIDAIVSKRN 680
Query: 495 ----SKQEQIHNSIVSTLLALMDGLDSRGQVVLIGATNRVDAIDGALRRPGRFDREFNFP 550
S + + ++ST L MDG++ V++IGATNR+D ID AL RPGRFD+
Sbjct: 681 LSDNSSGDNAQSRVLSTFLNEMDGVEQLNGVIVIGATNRLDMIDNALLRPGRFDKILEIK 740
Query: 551 LPGCEARAEILDIHTRKWKQPPSRELKSELAASCVGYCGADLKALCTEAAIRAFR 605
LP +R +IL I T+ + L E++ G+ GADL+ LC EA+ ++ R
Sbjct: 741 LPDQLSRLKILKIKTKSIPLSDNVNL-IEISNLTNGFSGADLENLCREASFQSLR 794
>CGD|CAL0006022 [details] [associations]
symbol:RPT6 species:5476 "Candida albicans" [GO:0005635
"nuclear envelope" evidence=IEA] [GO:0008540 "proteasome regulatory
particle, base subcomplex" evidence=IEA] [GO:0034515 "proteasome
storage granule" evidence=IEA] [GO:0019904 "protein domain specific
binding" evidence=IEA] [GO:0070682 "proteasome regulatory particle
assembly" evidence=IEA] [GO:0032968 "positive regulation of
transcription elongation from RNA polymerase II promoter"
evidence=IEA] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=IEA] [GO:0051091 "positive regulation
of sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0006338 "chromatin remodeling" evidence=IEA]
[GO:0045899 "positive regulation of RNA polymerase II
transcriptional preinitiation complex assembly" evidence=IEA]
[GO:0043433 "negative regulation of sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0006289
"nucleotide-excision repair" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 CGD:CAL0006022
GO:GO:0005524 GO:GO:0005737 GO:GO:0030163 GO:GO:0017111
EMBL:AACQ01000103 eggNOG:COG1222 TIGRFAMs:TIGR01242 KO:K03066
RefSeq:XP_714440.1 ProteinModelPortal:Q59Y56 STRING:Q59Y56
GeneID:3643877 KEGG:cal:CaO19.3593 Uniprot:Q59Y56
Length = 401
Score = 435 (158.2 bits), Expect = 5.6e-40, P = 5.6e-40
Identities = 98/258 (37%), Positives = 151/258 (58%)
Query: 371 QVDESVSFDDIGGLSEYIDALKEMVFFPLLYPDFFASYHITPPRGVLLCGPPGTGKTLIA 430
+V +S ++D +GGL + I +KE++ P+ +P+ F S I P+GV+L GPPGTGKTL+A
Sbjct: 137 KVPDS-TYDMVGGLDKQIKEIKEVIELPVKHPELFESLGIAQPKGVILYGPPGTGKTLLA 195
Query: 431 RALACAASKAGQKVSFYMRKGADVLSKWVGEAERQLKLLFEEAQRNQPSIIFFDEIDGLA 490
RA+A + F G++++ K++GE R ++ LF A+ + PSIIF DEID +
Sbjct: 196 RAVAHHT-----ECKFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIG 250
Query: 491 PVRSSKQEQIHNSIVSTLLALM---DGLDSRGQVVLIGATNRVDAIDGALRRPGRFDREF 547
R + + T+L L+ DG +S + +I ATNR+D +D AL RPGR DR+
Sbjct: 251 SSRVEGSSGGDSEVQRTMLELLNQLDGFESSKDIKIIMATNRLDILDPALLRPGRIDRKI 310
Query: 548 NFPLPGCEARAEILDIHTRKWKQPPSRELKSELAASCVGYCGADLKALCTEAAIRAFREK 607
FP P AR +IL IH+R L+ ++A G GAD+K +CTEA + A RE+
Sbjct: 311 EFPAPTVAARTDILKIHSRSMNLTRGINLR-KIAEKMNGCSGADVKGVCTEAGMYALRER 369
Query: 608 YPQVYTSDDKFLIDVDSV 625
+++ + + F + V V
Sbjct: 370 --RIHVTQEDFELAVAKV 385
>GENEDB_PFALCIPARUM|PF13_0063 [details] [associations]
symbol:PF13_0063 "26S proteasome regulatory
subunit 7, putative" species:5833 "Plasmodium falciparum"
[GO:0005838 "proteasome regulatory particle" evidence=ISS]
[GO:0004175 "endopeptidase activity" evidence=ISS] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=ISS]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005737 GO:GO:0004175 GO:GO:0006511
GO:GO:0017111 EMBL:AL844509 TIGRFAMs:TIGR01242 HOGENOM:HOG000225143
GO:GO:0005838 KO:K03061 OMA:DIRWELI ProtClustDB:CLSZ2429177
RefSeq:XP_001349843.2 ProteinModelPortal:Q8IEK3 IntAct:Q8IEK3
MINT:MINT-1698409 PRIDE:Q8IEK3 EnsemblProtists:PF13_0063:mRNA
GeneID:814041 KEGG:pfa:PF13_0063 EuPathDB:PlasmoDB:PF3D7_1311500
Uniprot:Q8IEK3
Length = 420
Score = 435 (158.2 bits), Expect = 5.6e-40, P = 5.6e-40
Identities = 97/262 (37%), Positives = 149/262 (56%)
Query: 370 LQVDES--VSFDDIGGLSEYIDALKEMVFFPLLYPDFFASYHITPPRGVLLCGPPGTGKT 427
+ V+E ++++DIGG E ++ L+E+V PLL P+ F + I PP+GVLL GPPGTGKT
Sbjct: 151 MTVEEKPDITYNDIGGCKEQLEKLREVVEMPLLQPERFVTLGIDPPKGVLLYGPPGTGKT 210
Query: 428 LIARALACAASKAGQKVSFYMRKGADVLSKWVGEAERQLKLLFEEAQRNQPSIIFFDEID 487
L ARA+A F G++++ K+VGE R ++ LF+ A+ + I+F DE+D
Sbjct: 211 LTARAIANRTDAC-----FICVIGSELVQKYVGEGARMVRELFQMAKSKKACILFIDEVD 265
Query: 488 GLAPVRSSKQEQIHNSIVSTLLAL---MDGLDSRGQVVLIGATNRVDAIDGALRRPGRFD 544
+ R + + + T+L + +DG D+RG + ++ ATNR D +D AL RPGR D
Sbjct: 266 AIGGSRGDESAHGDHEVQRTMLEIVNQLDGFDNRGNIKVLMATNRPDTLDSALVRPGRID 325
Query: 545 REFNFPLPGCEARAEILDIHTRKWKQPPSRELKSELAAS-CVGYCGADLKALCTEAAIRA 603
R F LP E R I IH SR+++ EL A C G+D++++CTEA + A
Sbjct: 326 RRIEFSLPDLEGRTHIFKIHANTMNM--SRDVRFELLARLCPNSTGSDIRSVCTEAGMFA 383
Query: 604 FREKYPQVYTSDDKFLIDVDSV 625
R + + D L+ ++ V
Sbjct: 384 IRARRKTITEKD--LLLAINKV 403
>UNIPROTKB|Q8IEK3 [details] [associations]
symbol:PF13_0063 "26S proteasome regulatory subunit 7,
putative" species:36329 "Plasmodium falciparum 3D7" [GO:0004175
"endopeptidase activity" evidence=ISS] [GO:0005838 "proteasome
regulatory particle" evidence=ISS] [GO:0006511 "ubiquitin-dependent
protein catabolic process" evidence=ISS] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005737 GO:GO:0004175 GO:GO:0006511 GO:GO:0017111
EMBL:AL844509 TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 GO:GO:0005838
KO:K03061 OMA:DIRWELI ProtClustDB:CLSZ2429177 RefSeq:XP_001349843.2
ProteinModelPortal:Q8IEK3 IntAct:Q8IEK3 MINT:MINT-1698409
PRIDE:Q8IEK3 EnsemblProtists:PF13_0063:mRNA GeneID:814041
KEGG:pfa:PF13_0063 EuPathDB:PlasmoDB:PF3D7_1311500 Uniprot:Q8IEK3
Length = 420
Score = 435 (158.2 bits), Expect = 5.6e-40, P = 5.6e-40
Identities = 97/262 (37%), Positives = 149/262 (56%)
Query: 370 LQVDES--VSFDDIGGLSEYIDALKEMVFFPLLYPDFFASYHITPPRGVLLCGPPGTGKT 427
+ V+E ++++DIGG E ++ L+E+V PLL P+ F + I PP+GVLL GPPGTGKT
Sbjct: 151 MTVEEKPDITYNDIGGCKEQLEKLREVVEMPLLQPERFVTLGIDPPKGVLLYGPPGTGKT 210
Query: 428 LIARALACAASKAGQKVSFYMRKGADVLSKWVGEAERQLKLLFEEAQRNQPSIIFFDEID 487
L ARA+A F G++++ K+VGE R ++ LF+ A+ + I+F DE+D
Sbjct: 211 LTARAIANRTDAC-----FICVIGSELVQKYVGEGARMVRELFQMAKSKKACILFIDEVD 265
Query: 488 GLAPVRSSKQEQIHNSIVSTLLAL---MDGLDSRGQVVLIGATNRVDAIDGALRRPGRFD 544
+ R + + + T+L + +DG D+RG + ++ ATNR D +D AL RPGR D
Sbjct: 266 AIGGSRGDESAHGDHEVQRTMLEIVNQLDGFDNRGNIKVLMATNRPDTLDSALVRPGRID 325
Query: 545 REFNFPLPGCEARAEILDIHTRKWKQPPSRELKSELAAS-CVGYCGADLKALCTEAAIRA 603
R F LP E R I IH SR+++ EL A C G+D++++CTEA + A
Sbjct: 326 RRIEFSLPDLEGRTHIFKIHANTMNM--SRDVRFELLARLCPNSTGSDIRSVCTEAGMFA 383
Query: 604 FREKYPQVYTSDDKFLIDVDSV 625
R + + D L+ ++ V
Sbjct: 384 IRARRKTITEKD--LLLAINKV 403
>ASPGD|ASPL0000064945 [details] [associations]
symbol:AN6988 species:162425 "Emericella nidulans"
[GO:0005524 "ATP binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005635
"nuclear envelope" evidence=IEA] [GO:0008540 "proteasome regulatory
particle, base subcomplex" evidence=IEA] [GO:0034515 "proteasome
storage granule" evidence=IEA] [GO:0019904 "protein domain specific
binding" evidence=IEA] [GO:0070682 "proteasome regulatory particle
assembly" evidence=IEA] [GO:0006338 "chromatin remodeling"
evidence=IEA] [GO:0032968 "positive regulation of transcription
elongation from RNA polymerase II promoter" evidence=IEA]
[GO:0043161 "proteasomal ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0051091 "positive regulation of
sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0045899 "positive regulation of RNA polymerase II
transcriptional preinitiation complex assembly" evidence=IEA]
[GO:0043433 "negative regulation of sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0006289
"nucleotide-excision repair" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005737 EMBL:BN001304 GO:GO:0030163 GO:GO:0017111
EMBL:AACD01000117 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 KO:K03066 OMA:QNIKVIM OrthoDB:EOG44N21J
RefSeq:XP_664592.1 ProteinModelPortal:Q5AXJ2 STRING:Q5AXJ2
EnsemblFungi:CADANIAT00000491 GeneID:2869968 KEGG:ani:AN6988.2
Uniprot:Q5AXJ2
Length = 389
Score = 433 (157.5 bits), Expect = 9.2e-40, P = 9.2e-40
Identities = 102/249 (40%), Positives = 147/249 (59%)
Query: 371 QVDESVSFDDIGGLSEYIDALKEMVFFPLLYPDFFASYHITPPRGVLLCGPPGTGKTLIA 430
+V +S ++D IGGL + I +KE++ L +P+ F S I P+GVLL GPPGTGKTL+A
Sbjct: 125 KVPDS-TYDMIGGLDQQIKEIKEVIELGLKHPELFESLGIAQPKGVLLYGPPGTGKTLLA 183
Query: 431 RALACAASKAGQKVSFYMRKGADVLSKWVGEAERQLKLLFEEAQRNQPSIIFFDEIDGLA 490
RA+A +VS G++++ K++GE R ++ LF A+ + PSIIF DEID +
Sbjct: 184 RAVAHHTDCRFIRVS-----GSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIG 238
Query: 491 PVRSSKQEQIHNSIVSTLLALM---DGLDSRGQVVLIGATNRVDAIDGALRRPGRFDREF 547
R + + T+L L+ DG + + +I ATNR+D +D AL RPGR DR+
Sbjct: 239 SSRIDSAGSGDSEVQRTMLELLNQLDGFEPTKNIKIIMATNRLDILDPALLRPGRIDRKI 298
Query: 548 NFPLPGCEARAEILDIHTRKWKQPPSRELKSELAASCVGYCGADLKALCTEAAIRAFREK 607
FP P EARA+IL IH+R L +++A G GA+LK +CTEA + A RE+
Sbjct: 299 EFPPPSVEARADILRIHSRSMNLTRGINL-TKIAEKMNGCSGAELKGVCTEAGMYALRER 357
Query: 608 YPQVYTSDD 616
V T +D
Sbjct: 358 RVHV-TQED 365
>UNIPROTKB|F1NU79 [details] [associations]
symbol:PSMC5 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0008134 "transcription factor binding"
evidence=IEA] [GO:0022624 "proteasome accessory complex"
evidence=IEA] [GO:0031410 "cytoplasmic vesicle" evidence=IEA]
[GO:0031531 "thyrotropin-releasing hormone receptor binding"
evidence=IEA] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=IEA] [GO:0045892 "negative regulation
of transcription, DNA-dependent" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005634 GO:GO:0045892 GO:GO:0043161 GO:GO:0031410
GO:GO:0017111 TIGRFAMs:TIGR01242 OMA:QNIKVIM
GeneTree:ENSGT00550000074947 EMBL:AADN02056696 IPI:IPI00574684
Ensembl:ENSGALT00000000469 Uniprot:F1NU79
Length = 412
Score = 430 (156.4 bits), Expect = 1.9e-39, P = 1.9e-39
Identities = 100/259 (38%), Positives = 156/259 (60%)
Query: 371 QVDESVSFDDIGGLSEYIDALKEMVFFPLLYPDFFASYHITPPRGVLLCGPPGTGKTLIA 430
+V +S +++ IGGL + I +KE++ P+ +P+ F + I P+GVLL GPPGTGKTL+A
Sbjct: 148 KVPDS-TYEMIGGLDKQIKEIKEVIELPVKHPELFEALGIAQPKGVLLYGPPGTGKTLLA 206
Query: 431 RALACAASKAGQKVSFYMRKGADVLSKWVGEAERQLKLLFEEAQRNQPSIIFFDEIDGLA 490
RA+A +VS G++++ K++GE R ++ LF A+ + PSIIF DEID +
Sbjct: 207 RAVAHHTDCTFIRVS-----GSELVQKFIGEGARMVRELFVMAREHAPSIIFMDEIDSIG 261
Query: 491 PVR----SSKQEQIHNSIVSTLLALMDGLDSRGQVVLIGATNRVDAIDGALRRPGRFDRE 546
R S ++ +++ LL +DG ++ + +I ATNR+D +D AL RPGR DR+
Sbjct: 262 SSRLEGGSGGDSEVQRTMLE-LLNQLDGFEATKNIKVIMATNRIDILDSALLRPGRIDRK 320
Query: 547 FNFPLPGCEARAEILDIHTRKWKQPPSRELKSELAASCVGYCGADLKALCTEAAIRAFRE 606
FP P EAR +IL IH+RK L+ ++A G GA++K +CTEA + A RE
Sbjct: 321 IEFPPPNEEARLDILKIHSRKMNLTRGINLR-KIAELMPGASGAEVKGVCTEAGMYALRE 379
Query: 607 KYPQVYTSDDKFLIDVDSV 625
+ +V+ + + F + V V
Sbjct: 380 R--RVHVTQEDFEMAVAKV 396
>UNIPROTKB|P62194 [details] [associations]
symbol:PSMC5 "26S protease regulatory subunit 8"
species:9913 "Bos taurus" [GO:0022624 "proteasome accessory
complex" evidence=ISS] [GO:0000502 "proteasome complex"
evidence=ISS] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=ISS] [GO:0031531 "thyrotropin-releasing
hormone receptor binding" evidence=ISS] [GO:0008134 "transcription
factor binding" evidence=ISS] [GO:0005737 "cytoplasm" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISS] [GO:0045892 "negative
regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0031410 "cytoplasmic vesicle" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0045892 GO:GO:0043161 GO:GO:0031410 GO:GO:0017111
GO:GO:0008134 eggNOG:COG1222 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109
GO:GO:0022624 HOGENOM:HOG000225143 KO:K03066 OMA:QNIKVIM
EMBL:AF069053 EMBL:BC146195 IPI:IPI00717227 RefSeq:NP_776866.1
UniGene:Bt.8062 ProteinModelPortal:P62194 SMR:P62194 STRING:P62194
PRIDE:P62194 Ensembl:ENSBTAT00000028048 GeneID:282015
KEGG:bta:282015 CTD:5705 GeneTree:ENSGT00550000074947
InParanoid:P62194 OrthoDB:EOG4MKNGF NextBio:20805880
ArrayExpress:P62194 GO:GO:0031531 Uniprot:P62194
Length = 406
Score = 430 (156.4 bits), Expect = 1.9e-39, P = 1.9e-39
Identities = 100/259 (38%), Positives = 156/259 (60%)
Query: 371 QVDESVSFDDIGGLSEYIDALKEMVFFPLLYPDFFASYHITPPRGVLLCGPPGTGKTLIA 430
+V +S +++ IGGL + I +KE++ P+ +P+ F + I P+GVLL GPPGTGKTL+A
Sbjct: 142 KVPDS-TYEMIGGLDKQIKEIKEVIELPVKHPELFEALGIAQPKGVLLYGPPGTGKTLLA 200
Query: 431 RALACAASKAGQKVSFYMRKGADVLSKWVGEAERQLKLLFEEAQRNQPSIIFFDEIDGLA 490
RA+A +VS G++++ K++GE R ++ LF A+ + PSIIF DEID +
Sbjct: 201 RAVAHHTDCTFIRVS-----GSELVQKFIGEGARMVRELFVMAREHAPSIIFMDEIDSIG 255
Query: 491 PVR----SSKQEQIHNSIVSTLLALMDGLDSRGQVVLIGATNRVDAIDGALRRPGRFDRE 546
R S ++ +++ LL +DG ++ + +I ATNR+D +D AL RPGR DR+
Sbjct: 256 SSRLEGGSGGDSEVQRTMLE-LLNQLDGFEATKNIKVIMATNRIDILDSALLRPGRIDRK 314
Query: 547 FNFPLPGCEARAEILDIHTRKWKQPPSRELKSELAASCVGYCGADLKALCTEAAIRAFRE 606
FP P EAR +IL IH+RK L+ ++A G GA++K +CTEA + A RE
Sbjct: 315 IEFPPPNEEARLDILKIHSRKMNLTRGINLR-KIAELMPGASGAEVKGVCTEAGMYALRE 373
Query: 607 KYPQVYTSDDKFLIDVDSV 625
+ +V+ + + F + V V
Sbjct: 374 R--RVHVTQEDFEMAVAKV 390
>UNIPROTKB|P62195 [details] [associations]
symbol:PSMC5 "26S protease regulatory subunit 8"
species:9606 "Homo sapiens" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0017025 "TBP-class protein binding" evidence=IEA] [GO:0031595
"nuclear proteasome complex" evidence=IEA] [GO:0045892 "negative
regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0043161 "proteasomal ubiquitin-dependent protein catabolic
process" evidence=IDA] [GO:0000502 "proteasome complex"
evidence=IDA] [GO:0016887 "ATPase activity" evidence=TAS]
[GO:0031531 "thyrotropin-releasing hormone receptor binding"
evidence=IPI] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=NAS] [GO:0008134 "transcription factor
binding" evidence=IPI] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0043069 "negative regulation of programmed cell
death" evidence=NAS] [GO:0022624 "proteasome accessory complex"
evidence=ISS] [GO:0031410 "cytoplasmic vesicle" evidence=IDA]
[GO:0003712 "transcription cofactor activity" evidence=TAS]
[GO:0006366 "transcription from RNA polymerase II promoter"
evidence=TAS] [GO:0000075 "cell cycle checkpoint" evidence=TAS]
[GO:0000082 "G1/S transition of mitotic cell cycle" evidence=TAS]
[GO:0000084 "S phase of mitotic cell cycle" evidence=TAS]
[GO:0000209 "protein polyubiquitination" evidence=TAS] [GO:0000216
"M/G1 transition of mitotic cell cycle" evidence=TAS] [GO:0000278
"mitotic cell cycle" evidence=TAS] [GO:0002474 "antigen processing
and presentation of peptide antigen via MHC class I" evidence=TAS]
[GO:0002479 "antigen processing and presentation of exogenous
peptide antigen via MHC class I, TAP-dependent" evidence=TAS]
[GO:0005654 "nucleoplasm" evidence=TAS] [GO:0005829 "cytosol"
evidence=TAS] [GO:0006521 "regulation of cellular amino acid
metabolic process" evidence=TAS] [GO:0006915 "apoptotic process"
evidence=TAS] [GO:0006977 "DNA damage response, signal transduction
by p53 class mediator resulting in cell cycle arrest" evidence=TAS]
[GO:0010467 "gene expression" evidence=TAS] [GO:0016032 "viral
reproduction" evidence=TAS] [GO:0016070 "RNA metabolic process"
evidence=TAS] [GO:0016071 "mRNA metabolic process" evidence=TAS]
[GO:0031145 "anaphase-promoting complex-dependent proteasomal
ubiquitin-dependent protein catabolic process" evidence=TAS]
[GO:0034641 "cellular nitrogen compound metabolic process"
evidence=TAS] [GO:0042590 "antigen processing and presentation of
exogenous peptide antigen via MHC class I" evidence=TAS]
[GO:0042981 "regulation of apoptotic process" evidence=TAS]
[GO:0044281 "small molecule metabolic process" evidence=TAS]
[GO:0051436 "negative regulation of ubiquitin-protein ligase
activity involved in mitotic cell cycle" evidence=TAS] [GO:0051437
"positive regulation of ubiquitin-protein ligase activity involved
in mitotic cell cycle" evidence=TAS] [GO:0051439 "regulation of
ubiquitin-protein ligase activity involved in mitotic cell cycle"
evidence=TAS] [GO:0005730 "nucleolus" evidence=IDA]
Reactome:REACT_13505 Reactome:REACT_578 Reactome:REACT_71
Reactome:REACT_21257 Reactome:REACT_6850 Reactome:REACT_111217
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
EMBL:L38810 GO:GO:0005829 GO:GO:0005524 Reactome:REACT_111102
Reactome:REACT_116125 Reactome:REACT_6900 GO:GO:0006915
GO:GO:0016071 GO:GO:0045892 Reactome:REACT_115566 GO:GO:0045893
GO:GO:0005654 GO:GO:0002479 GO:GO:0016032 Reactome:REACT_21300
GO:GO:0006977 GO:GO:0042981 GO:GO:0000082 GO:GO:0031410
GO:GO:0016887 GO:GO:0006366 GO:GO:0043069 GO:GO:0051436
EMBL:CH471109 GO:GO:0003712 GO:GO:0000216 GO:GO:0000209
GO:GO:0000084 GO:GO:0031145 GO:GO:0051437 GO:GO:0006521
Reactome:REACT_383 EMBL:AC015651 ChiTaRS:PSMC5 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 GO:GO:0022624 KO:K03066
OMA:QNIKVIM CTD:5705 OrthoDB:EOG4MKNGF EMBL:D44467 EMBL:AK290758
EMBL:AK291878 EMBL:BC001932 EMBL:BC002367 EMBL:AF035309
IPI:IPI00023919 PIR:S60343 PIR:S65536 RefSeq:NP_001186092.1
RefSeq:NP_002796.4 UniGene:Hs.79387 PDB:2KRK PDB:3KW6 PDBsum:2KRK
PDBsum:3KW6 ProteinModelPortal:P62195 SMR:P62195 IntAct:P62195
MINT:MINT-5004394 STRING:P62195 PhosphoSite:P62195 DMDM:49065819
PaxDb:P62195 PRIDE:P62195 DNASU:5705 Ensembl:ENST00000310144
Ensembl:ENST00000375812 Ensembl:ENST00000580864
Ensembl:ENST00000581882 GeneID:5705 KEGG:hsa:5705 UCSC:uc002jcb.3
GeneCards:GC17P061904 HGNC:HGNC:9552 HPA:HPA017871 MIM:601681
neXtProt:NX_P62195 PharmGKB:PA33897 InParanoid:P62195
PhylomeDB:P62195 EvolutionaryTrace:P62195 GenomeRNAi:5705
NextBio:22166 ArrayExpress:P62195 Bgee:P62195 CleanEx:HS_PSMC5
Genevestigator:P62195 GermOnline:ENSG00000087191 Uniprot:P62195
Length = 406
Score = 430 (156.4 bits), Expect = 1.9e-39, P = 1.9e-39
Identities = 100/259 (38%), Positives = 156/259 (60%)
Query: 371 QVDESVSFDDIGGLSEYIDALKEMVFFPLLYPDFFASYHITPPRGVLLCGPPGTGKTLIA 430
+V +S +++ IGGL + I +KE++ P+ +P+ F + I P+GVLL GPPGTGKTL+A
Sbjct: 142 KVPDS-TYEMIGGLDKQIKEIKEVIELPVKHPELFEALGIAQPKGVLLYGPPGTGKTLLA 200
Query: 431 RALACAASKAGQKVSFYMRKGADVLSKWVGEAERQLKLLFEEAQRNQPSIIFFDEIDGLA 490
RA+A +VS G++++ K++GE R ++ LF A+ + PSIIF DEID +
Sbjct: 201 RAVAHHTDCTFIRVS-----GSELVQKFIGEGARMVRELFVMAREHAPSIIFMDEIDSIG 255
Query: 491 PVR----SSKQEQIHNSIVSTLLALMDGLDSRGQVVLIGATNRVDAIDGALRRPGRFDRE 546
R S ++ +++ LL +DG ++ + +I ATNR+D +D AL RPGR DR+
Sbjct: 256 SSRLEGGSGGDSEVQRTMLE-LLNQLDGFEATKNIKVIMATNRIDILDSALLRPGRIDRK 314
Query: 547 FNFPLPGCEARAEILDIHTRKWKQPPSRELKSELAASCVGYCGADLKALCTEAAIRAFRE 606
FP P EAR +IL IH+RK L+ ++A G GA++K +CTEA + A RE
Sbjct: 315 IEFPPPNEEARLDILKIHSRKMNLTRGINLR-KIAELMPGASGAEVKGVCTEAGMYALRE 373
Query: 607 KYPQVYTSDDKFLIDVDSV 625
+ +V+ + + F + V V
Sbjct: 374 R--RVHVTQEDFEMAVAKV 390
>UNIPROTKB|P62197 [details] [associations]
symbol:PSMC5 "26S protease regulatory subunit 8"
species:9823 "Sus scrofa" [GO:0022624 "proteasome accessory
complex" evidence=ISS] [GO:0008134 "transcription factor binding"
evidence=ISS] [GO:0000502 "proteasome complex" evidence=ISS]
[GO:0043161 "proteasomal ubiquitin-dependent protein catabolic
process" evidence=ISS] [GO:0031531 "thyrotropin-releasing hormone
receptor binding" evidence=ISS] [GO:0005737 "cytoplasm"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISS] [GO:0045892
"negative regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0031410 "cytoplasmic vesicle" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0045892 GO:GO:0043161 GO:GO:0031410 GO:GO:0017111
GO:GO:0008134 eggNOG:COG1222 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109
GO:GO:0022624 HOGENOM:HOG000225143 KO:K03066 OMA:QNIKVIM
GeneTree:ENSGT00550000074947 OrthoDB:EOG4MKNGF GO:GO:0031531
EMBL:X89718 EMBL:X89719 RefSeq:NP_999148.1 UniGene:Ssc.5451
ProteinModelPortal:P62197 SMR:P62197 STRING:P62197 PRIDE:P62197
Ensembl:ENSSSCT00000018819 GeneID:397043 KEGG:ssc:397043 CTD:397043
Uniprot:P62197
Length = 406
Score = 430 (156.4 bits), Expect = 1.9e-39, P = 1.9e-39
Identities = 100/259 (38%), Positives = 156/259 (60%)
Query: 371 QVDESVSFDDIGGLSEYIDALKEMVFFPLLYPDFFASYHITPPRGVLLCGPPGTGKTLIA 430
+V +S +++ IGGL + I +KE++ P+ +P+ F + I P+GVLL GPPGTGKTL+A
Sbjct: 142 KVPDS-TYEMIGGLDKQIKEIKEVIELPVKHPELFEALGIAQPKGVLLYGPPGTGKTLLA 200
Query: 431 RALACAASKAGQKVSFYMRKGADVLSKWVGEAERQLKLLFEEAQRNQPSIIFFDEIDGLA 490
RA+A +VS G++++ K++GE R ++ LF A+ + PSIIF DEID +
Sbjct: 201 RAVAHHTDCTFIRVS-----GSELVQKFIGEGARMVRELFVMAREHAPSIIFMDEIDSIG 255
Query: 491 PVR----SSKQEQIHNSIVSTLLALMDGLDSRGQVVLIGATNRVDAIDGALRRPGRFDRE 546
R S ++ +++ LL +DG ++ + +I ATNR+D +D AL RPGR DR+
Sbjct: 256 SSRLEGGSGGDSEVQRTMLE-LLNQLDGFEATKNIKVIMATNRIDILDSALLRPGRIDRK 314
Query: 547 FNFPLPGCEARAEILDIHTRKWKQPPSRELKSELAASCVGYCGADLKALCTEAAIRAFRE 606
FP P EAR +IL IH+RK L+ ++A G GA++K +CTEA + A RE
Sbjct: 315 IEFPPPNEEARLDILKIHSRKMNLTRGINLR-KIAELMPGASGAEVKGVCTEAGMYALRE 373
Query: 607 KYPQVYTSDDKFLIDVDSV 625
+ +V+ + + F + V V
Sbjct: 374 R--RVHVTQEDFEMAVAKV 390
>UNIPROTKB|Q4RG45 [details] [associations]
symbol:GSTENG00035021001 "Chromosome 2 SCAF15106, whole
genome shotgun sequence." species:99883 "Tetraodon nigroviridis"
[GO:0000502 "proteasome complex" evidence=ISS] [GO:0005634
"nucleus" evidence=ISS] [GO:0005737 "cytoplasm" evidence=ISS]
[GO:0008134 "transcription factor binding" evidence=ISS]
[GO:0031531 "thyrotropin-releasing hormone receptor binding"
evidence=ISS] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=ISS] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0043161 GO:GO:0000502
GO:GO:0017111 GO:GO:0008134 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOVERGEN:HBG000109 GO:GO:0031531 EMBL:CAAE01015106
ProteinModelPortal:Q4RG45 STRING:Q4RG45 Uniprot:Q4RG45
Length = 406
Score = 430 (156.4 bits), Expect = 1.9e-39, P = 1.9e-39
Identities = 100/259 (38%), Positives = 156/259 (60%)
Query: 371 QVDESVSFDDIGGLSEYIDALKEMVFFPLLYPDFFASYHITPPRGVLLCGPPGTGKTLIA 430
+V +S +++ IGGL + I +KE++ P+ +P+ F + I P+GVLL GPPGTGKTL+A
Sbjct: 142 KVPDS-TYEMIGGLDKQIKEIKEVIELPVKHPELFEALGIAQPKGVLLYGPPGTGKTLLA 200
Query: 431 RALACAASKAGQKVSFYMRKGADVLSKWVGEAERQLKLLFEEAQRNQPSIIFFDEIDGLA 490
RA+A +VS G++++ K++GE R ++ LF A+ + PSIIF DEID +
Sbjct: 201 RAVAHHTDCTFIRVS-----GSELVQKFIGEGARMVRELFVMAREHAPSIIFMDEIDSIG 255
Query: 491 PVR----SSKQEQIHNSIVSTLLALMDGLDSRGQVVLIGATNRVDAIDGALRRPGRFDRE 546
R S ++ +++ LL +DG ++ + +I ATNR+D +D AL RPGR DR+
Sbjct: 256 SSRLEGGSGGDSEVQRTMLE-LLNQLDGFEATKNIKVIMATNRIDILDSALLRPGRIDRK 314
Query: 547 FNFPLPGCEARAEILDIHTRKWKQPPSRELKSELAASCVGYCGADLKALCTEAAIRAFRE 606
FP P EAR +IL IH+RK L+ ++A G GA++K +CTEA + A RE
Sbjct: 315 IEFPPPNEEARLDILKIHSRKMNLTRGINLR-KIAELMPGASGAEVKGVCTEAGMYALRE 373
Query: 607 KYPQVYTSDDKFLIDVDSV 625
+ +V+ + + F + V V
Sbjct: 374 R--RVHVTQEDFEMAVAKV 390
>UNIPROTKB|Q6AZU7 [details] [associations]
symbol:Q6AZU7 "Putative uncharacterized protein"
species:8355 "Xenopus laevis" [GO:0000502 "proteasome complex"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISS] [GO:0005737
"cytoplasm" evidence=ISS] [GO:0008134 "transcription factor
binding" evidence=ISS] [GO:0031531 "thyrotropin-releasing hormone
receptor binding" evidence=ISS] [GO:0043161 "proteasomal
ubiquitin-dependent protein catabolic process" evidence=ISS]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0043161
GO:GO:0000502 GO:GO:0017111 GO:GO:0008134 TIGRFAMs:TIGR01242
HOVERGEN:HBG000109 GO:GO:0031531 EMBL:BC077223
ProteinModelPortal:Q6AZU7 Uniprot:Q6AZU7
Length = 414
Score = 430 (156.4 bits), Expect = 1.9e-39, P = 1.9e-39
Identities = 100/259 (38%), Positives = 156/259 (60%)
Query: 371 QVDESVSFDDIGGLSEYIDALKEMVFFPLLYPDFFASYHITPPRGVLLCGPPGTGKTLIA 430
+V +S +++ IGGL + I +KE++ P+ +P+ F + I P+GVLL GPPGTGKTL+A
Sbjct: 150 KVPDS-TYEMIGGLDKQIKEIKEVIELPVKHPELFEALGIAQPKGVLLYGPPGTGKTLLA 208
Query: 431 RALACAASKAGQKVSFYMRKGADVLSKWVGEAERQLKLLFEEAQRNQPSIIFFDEIDGLA 490
RA+A +VS G++++ K++GE R ++ LF A+ + PSIIF DEID +
Sbjct: 209 RAVAHHTDCTFIRVS-----GSELVQKFIGEGARMVRELFVMAREHAPSIIFMDEIDSIG 263
Query: 491 PVR----SSKQEQIHNSIVSTLLALMDGLDSRGQVVLIGATNRVDAIDGALRRPGRFDRE 546
R S ++ +++ LL +DG ++ + +I ATNR+D +D AL RPGR DR+
Sbjct: 264 SSRLEGGSGGDSEVQRTMLE-LLNQLDGFEATKNIKVIMATNRIDILDSALLRPGRIDRK 322
Query: 547 FNFPLPGCEARAEILDIHTRKWKQPPSRELKSELAASCVGYCGADLKALCTEAAIRAFRE 606
FP P EAR +IL IH+RK L+ ++A G GA++K +CTEA + A RE
Sbjct: 323 IEFPPPNEEARLDILKIHSRKMNLTRGINLR-KIAELMPGASGAEVKGVCTEAGMYALRE 381
Query: 607 KYPQVYTSDDKFLIDVDSV 625
+ +V+ + + F + V V
Sbjct: 382 R--RVHVTQEDFEMAVAKV 398
>UNIPROTKB|Q6P380 [details] [associations]
symbol:psmc5 "Putative uncharacterized protein MGC75584"
species:8364 "Xenopus (Silurana) tropicalis" [GO:0000502
"proteasome complex" evidence=ISS] [GO:0005634 "nucleus"
evidence=ISS] [GO:0005737 "cytoplasm" evidence=ISS] [GO:0008134
"transcription factor binding" evidence=ISS] [GO:0031531
"thyrotropin-releasing hormone receptor binding" evidence=ISS]
[GO:0043161 "proteasomal ubiquitin-dependent protein catabolic
process" evidence=ISS] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0043161 GO:GO:0000502 GO:GO:0017111 GO:GO:0008134
eggNOG:COG1222 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109
HOGENOM:HOG000225143 KO:K03066 CTD:5705 OrthoDB:EOG4MKNGF
GO:GO:0031531 EMBL:BC064153 RefSeq:NP_989358.1 UniGene:Str.3783
ProteinModelPortal:Q6P380 STRING:Q6P380 GeneID:394988
KEGG:xtr:394988 Xenbase:XB-GENE-999928 InParanoid:Q6P380
Uniprot:Q6P380
Length = 414
Score = 430 (156.4 bits), Expect = 1.9e-39, P = 1.9e-39
Identities = 100/259 (38%), Positives = 156/259 (60%)
Query: 371 QVDESVSFDDIGGLSEYIDALKEMVFFPLLYPDFFASYHITPPRGVLLCGPPGTGKTLIA 430
+V +S +++ IGGL + I +KE++ P+ +P+ F + I P+GVLL GPPGTGKTL+A
Sbjct: 150 KVPDS-TYEMIGGLDKQIKEIKEVIELPVKHPELFEALGIAQPKGVLLYGPPGTGKTLLA 208
Query: 431 RALACAASKAGQKVSFYMRKGADVLSKWVGEAERQLKLLFEEAQRNQPSIIFFDEIDGLA 490
RA+A +VS G++++ K++GE R ++ LF A+ + PSIIF DEID +
Sbjct: 209 RAVAHHTDCTFIRVS-----GSELVQKFIGEGARMVRELFVMAREHAPSIIFMDEIDSIG 263
Query: 491 PVR----SSKQEQIHNSIVSTLLALMDGLDSRGQVVLIGATNRVDAIDGALRRPGRFDRE 546
R S ++ +++ LL +DG ++ + +I ATNR+D +D AL RPGR DR+
Sbjct: 264 SSRLEGGSGGDSEVQRTMLE-LLNQLDGFEATKNIKVIMATNRIDILDSALLRPGRIDRK 322
Query: 547 FNFPLPGCEARAEILDIHTRKWKQPPSRELKSELAASCVGYCGADLKALCTEAAIRAFRE 606
FP P EAR +IL IH+RK L+ ++A G GA++K +CTEA + A RE
Sbjct: 323 IEFPPPNEEARLDILKIHSRKMNLTRGINLR-KIAELMPGASGAEVKGVCTEAGMYALRE 381
Query: 607 KYPQVYTSDDKFLIDVDSV 625
+ +V+ + + F + V V
Sbjct: 382 R--RVHVTQEDFEMAVAKV 398
>MGI|MGI:105047 [details] [associations]
symbol:Psmc5 "protease (prosome, macropain) 26S subunit,
ATPase 5" species:10090 "Mus musculus" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0000502 "proteasome complex"
evidence=ISO] [GO:0005102 "receptor binding" evidence=IPI]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=ISO]
[GO:0005675 "holo TFIIH complex" evidence=ISA] [GO:0005737
"cytoplasm" evidence=ISO] [GO:0006200 "ATP catabolic process"
evidence=ISO] [GO:0006508 "proteolysis" evidence=IEA] [GO:0008134
"transcription factor binding" evidence=ISO;ISA] [GO:0008233
"peptidase activity" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0016887 "ATPase activity" evidence=ISO]
[GO:0017025 "TBP-class protein binding" evidence=ISO] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0022624
"proteasome accessory complex" evidence=IDA] [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0031410 "cytoplasmic vesicle"
evidence=ISO] [GO:0031531 "thyrotropin-releasing hormone receptor
binding" evidence=ISO] [GO:0031595 "nuclear proteasome complex"
evidence=ISO] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=ISO] [GO:0045892 "negative regulation
of transcription, DNA-dependent" evidence=IDA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 MGI:MGI:105047
GO:GO:0005524 GO:GO:0005737 GO:GO:0045892 GO:GO:0043161
GO:GO:0031410 GO:GO:0017111 GO:GO:0008134 GO:GO:0005675
eggNOG:COG1222 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 GO:GO:0022624
KO:K03066 OMA:QNIKVIM CTD:5705 GeneTree:ENSGT00550000074947
OrthoDB:EOG4MKNGF GO:GO:0031531 EMBL:Z54219 EMBL:AK010505
EMBL:AK135451 EMBL:AK145703 IPI:IPI00135640 PIR:S61923
RefSeq:NP_032976.1 UniGene:Mm.272361 ProteinModelPortal:P62196
SMR:P62196 IntAct:P62196 STRING:P62196 PhosphoSite:P62196
REPRODUCTION-2DPAGE:IPI00135640 REPRODUCTION-2DPAGE:P62196
PaxDb:P62196 PRIDE:P62196 Ensembl:ENSMUST00000021049 GeneID:19184
KEGG:mmu:19184 InParanoid:P62196 NextBio:295882 Bgee:P62196
Genevestigator:P62196 GermOnline:ENSMUSG00000020708 Uniprot:P62196
Length = 406
Score = 430 (156.4 bits), Expect = 1.9e-39, P = 1.9e-39
Identities = 100/259 (38%), Positives = 156/259 (60%)
Query: 371 QVDESVSFDDIGGLSEYIDALKEMVFFPLLYPDFFASYHITPPRGVLLCGPPGTGKTLIA 430
+V +S +++ IGGL + I +KE++ P+ +P+ F + I P+GVLL GPPGTGKTL+A
Sbjct: 142 KVPDS-TYEMIGGLDKQIKEIKEVIELPVKHPELFEALGIAQPKGVLLYGPPGTGKTLLA 200
Query: 431 RALACAASKAGQKVSFYMRKGADVLSKWVGEAERQLKLLFEEAQRNQPSIIFFDEIDGLA 490
RA+A +VS G++++ K++GE R ++ LF A+ + PSIIF DEID +
Sbjct: 201 RAVAHHTDCTFIRVS-----GSELVQKFIGEGARMVRELFVMAREHAPSIIFMDEIDSIG 255
Query: 491 PVR----SSKQEQIHNSIVSTLLALMDGLDSRGQVVLIGATNRVDAIDGALRRPGRFDRE 546
R S ++ +++ LL +DG ++ + +I ATNR+D +D AL RPGR DR+
Sbjct: 256 SSRLEGGSGGDSEVQRTMLE-LLNQLDGFEATKNIKVIMATNRIDILDSALLRPGRIDRK 314
Query: 547 FNFPLPGCEARAEILDIHTRKWKQPPSRELKSELAASCVGYCGADLKALCTEAAIRAFRE 606
FP P EAR +IL IH+RK L+ ++A G GA++K +CTEA + A RE
Sbjct: 315 IEFPPPNEEARLDILKIHSRKMNLTRGINLR-KIAELMPGASGAEVKGVCTEAGMYALRE 373
Query: 607 KYPQVYTSDDKFLIDVDSV 625
+ +V+ + + F + V V
Sbjct: 374 R--RVHVTQEDFEMAVAKV 390
>RGD|708376 [details] [associations]
symbol:Psmc5 "proteasome (prosome, macropain) 26S subunit,
ATPase, 5" species:10116 "Rattus norvegicus" [GO:0000502
"proteasome complex" evidence=ISO;ISS] [GO:0005102 "receptor
binding" evidence=ISO] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISO;ISS;IDA] [GO:0005737 "cytoplasm"
evidence=ISO;ISS] [GO:0006200 "ATP catabolic process" evidence=IDA]
[GO:0008134 "transcription factor binding" evidence=ISO;ISS]
[GO:0016887 "ATPase activity" evidence=IDA] [GO:0017025 "TBP-class
protein binding" evidence=IPI] [GO:0022624 "proteasome accessory
complex" evidence=ISO;ISS] [GO:0031410 "cytoplasmic vesicle"
evidence=IEA;ISO] [GO:0031531 "thyrotropin-releasing hormone
receptor binding" evidence=ISO;ISS] [GO:0031595 "nuclear proteasome
complex" evidence=IDA] [GO:0043161 "proteasomal ubiquitin-dependent
protein catabolic process" evidence=ISO;ISS] [GO:0045892 "negative
regulation of transcription, DNA-dependent" evidence=IEA;ISO]
[GO:0005730 "nucleolus" evidence=ISO] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 RGD:708376 GO:GO:0005524
GO:GO:0005737 GO:GO:0045892 GO:GO:0043161 GO:GO:0031410
GO:GO:0016887 GO:GO:0008134 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOVERGEN:HBG000109 GO:GO:0022624 HOGENOM:HOG000225143 KO:K03066
OMA:QNIKVIM CTD:5705 GeneTree:ENSGT00550000074947 OrthoDB:EOG4MKNGF
GO:GO:0031531 EMBL:D83521 EMBL:AB000491 EMBL:AB000493 EMBL:BC058462
IPI:IPI00213587 PIR:T43799 RefSeq:NP_112411.1 UniGene:Rn.10972
ProteinModelPortal:P62198 SMR:P62198 IntAct:P62198 STRING:P62198
PhosphoSite:P62198 World-2DPAGE:0004:P62198 PRIDE:P62198
Ensembl:ENSRNOT00000013997 GeneID:81827 KEGG:rno:81827
UCSC:RGD:708376 InParanoid:P62198 NextBio:615767
ArrayExpress:P62198 Genevestigator:P62198
GermOnline:ENSRNOG00000010038 GO:GO:0031595 Uniprot:P62198
Length = 406
Score = 430 (156.4 bits), Expect = 1.9e-39, P = 1.9e-39
Identities = 100/259 (38%), Positives = 156/259 (60%)
Query: 371 QVDESVSFDDIGGLSEYIDALKEMVFFPLLYPDFFASYHITPPRGVLLCGPPGTGKTLIA 430
+V +S +++ IGGL + I +KE++ P+ +P+ F + I P+GVLL GPPGTGKTL+A
Sbjct: 142 KVPDS-TYEMIGGLDKQIKEIKEVIELPVKHPELFEALGIAQPKGVLLYGPPGTGKTLLA 200
Query: 431 RALACAASKAGQKVSFYMRKGADVLSKWVGEAERQLKLLFEEAQRNQPSIIFFDEIDGLA 490
RA+A +VS G++++ K++GE R ++ LF A+ + PSIIF DEID +
Sbjct: 201 RAVAHHTDCTFIRVS-----GSELVQKFIGEGARMVRELFVMAREHAPSIIFMDEIDSIG 255
Query: 491 PVR----SSKQEQIHNSIVSTLLALMDGLDSRGQVVLIGATNRVDAIDGALRRPGRFDRE 546
R S ++ +++ LL +DG ++ + +I ATNR+D +D AL RPGR DR+
Sbjct: 256 SSRLEGGSGGDSEVQRTMLE-LLNQLDGFEATKNIKVIMATNRIDILDSALLRPGRIDRK 314
Query: 547 FNFPLPGCEARAEILDIHTRKWKQPPSRELKSELAASCVGYCGADLKALCTEAAIRAFRE 606
FP P EAR +IL IH+RK L+ ++A G GA++K +CTEA + A RE
Sbjct: 315 IEFPPPNEEARLDILKIHSRKMNLTRGINLR-KIAELMPGASGAEVKGVCTEAGMYALRE 373
Query: 607 KYPQVYTSDDKFLIDVDSV 625
+ +V+ + + F + V V
Sbjct: 374 R--RVHVTQEDFEMAVAKV 390
>ZFIN|ZDB-GENE-030131-6547 [details] [associations]
symbol:psmc5 "proteasome (prosome, macropain) 26S
subunit, ATPase, 5" species:7955 "Danio rerio" [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA;ISS] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0005634 "nucleus" evidence=ISS] [GO:0031531
"thyrotropin-releasing hormone receptor binding" evidence=ISS]
[GO:0000502 "proteasome complex" evidence=IEA;ISS] [GO:0008134
"transcription factor binding" evidence=ISS] [GO:0043161
"proteasomal ubiquitin-dependent protein catabolic process"
evidence=ISS] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 ZFIN:ZDB-GENE-030131-6547 GO:GO:0005524 GO:GO:0005634
GO:GO:0005737 GO:GO:0043161 GO:GO:0000502 GO:GO:0017111
GO:GO:0008134 eggNOG:COG1222 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109
HOGENOM:HOG000225143 KO:K03066 OMA:QNIKVIM CTD:5705
GeneTree:ENSGT00550000074947 OrthoDB:EOG4MKNGF GO:GO:0031531
EMBL:CU459020 EMBL:BC078375 IPI:IPI00482097 RefSeq:NP_001003740.1
UniGene:Dr.75934 STRING:Q6AZC1 Ensembl:ENSDART00000106191
GeneID:445285 KEGG:dre:445285 InParanoid:Q6AZC1 NextBio:20832032
Uniprot:Q6AZC1
Length = 406
Score = 430 (156.4 bits), Expect = 1.9e-39, P = 1.9e-39
Identities = 100/259 (38%), Positives = 156/259 (60%)
Query: 371 QVDESVSFDDIGGLSEYIDALKEMVFFPLLYPDFFASYHITPPRGVLLCGPPGTGKTLIA 430
+V +S +++ IGGL + I +KE++ P+ +P+ F + I P+GVLL GPPGTGKTL+A
Sbjct: 142 KVPDS-TYEMIGGLDKQIKEIKEVIELPVKHPELFEALGIAQPKGVLLYGPPGTGKTLLA 200
Query: 431 RALACAASKAGQKVSFYMRKGADVLSKWVGEAERQLKLLFEEAQRNQPSIIFFDEIDGLA 490
RA+A +VS G++++ K++GE R ++ LF A+ + PSIIF DEID +
Sbjct: 201 RAVAHHTDCTFIRVS-----GSELVQKFIGEGARMVRELFVMAREHAPSIIFMDEIDSIG 255
Query: 491 PVR----SSKQEQIHNSIVSTLLALMDGLDSRGQVVLIGATNRVDAIDGALRRPGRFDRE 546
R S ++ +++ LL +DG ++ + +I ATNR+D +D AL RPGR DR+
Sbjct: 256 SSRLEGGSGGDSEVQRTMLE-LLNQLDGFEATKNIKVIMATNRIDILDSALLRPGRIDRK 314
Query: 547 FNFPLPGCEARAEILDIHTRKWKQPPSRELKSELAASCVGYCGADLKALCTEAAIRAFRE 606
FP P EAR +IL IH+RK L+ ++A G GA++K +CTEA + A RE
Sbjct: 315 IEFPPPNEEARLDILKIHSRKMNLTRGINLR-KIAELMPGASGAEVKGVCTEAGMYALRE 373
Query: 607 KYPQVYTSDDKFLIDVDSV 625
+ +V+ + + F + V V
Sbjct: 374 R--RVHVTQEDFEMAVAKV 390
>FB|FBgn0020369 [details] [associations]
symbol:Rpt6 "Regulatory particle triple-A ATPase 6"
species:7227 "Drosophila melanogaster" [GO:0005634 "nucleus"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0004175
"endopeptidase activity" evidence=IDA;NAS] [GO:0008540 "proteasome
regulatory particle, base subcomplex" evidence=ISS;NAS] [GO:0005838
"proteasome regulatory particle" evidence=ISS;IDA;NAS] [GO:0000502
"proteasome complex" evidence=NAS] [GO:0006511 "ubiquitin-dependent
protein catabolic process" evidence=NAS] [GO:0006508 "proteolysis"
evidence=ISS;IDA;NAS] [GO:0016887 "ATPase activity" evidence=NAS]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005875
"microtubule associated complex" evidence=IDA] [GO:0006974
"response to DNA damage stimulus" evidence=IMP] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0005875 EMBL:AE014298
GO:GO:0006508 GO:GO:0006974 GO:GO:0016887 GO:GO:0004175
GO:GO:0030163 eggNOG:COG1222 TIGRFAMs:TIGR01242 GO:GO:0008540
BRENDA:3.4.25.1 KO:K03066 OMA:QNIKVIM GeneTree:ENSGT00550000074947
EMBL:U97538 EMBL:AF043734 EMBL:AY051732 RefSeq:NP_608447.1
UniGene:Dm.2162 ProteinModelPortal:O18413 SMR:O18413 DIP:DIP-20087N
IntAct:O18413 MINT:MINT-759582 STRING:O18413 PaxDb:O18413
PRIDE:O18413 EnsemblMetazoa:FBtr0077189 GeneID:33105
KEGG:dme:Dmel_CG1489 CTD:33105 FlyBase:FBgn0020369
InParanoid:O18413 OrthoDB:EOG47D7XJ PhylomeDB:O18413
GenomeRNAi:33105 NextBio:781933 Bgee:O18413 GermOnline:CG1489
Uniprot:O18413
Length = 405
Score = 429 (156.1 bits), Expect = 2.5e-39, P = 2.5e-39
Identities = 98/258 (37%), Positives = 154/258 (59%)
Query: 371 QVDESVSFDDIGGLSEYIDALKEMVFFPLLYPDFFASYHITPPRGVLLCGPPGTGKTLIA 430
+V +S +++ +GGL + I +KE++ P+ +P+ F + I P+GVLL GPPGTGKTL+A
Sbjct: 141 KVPDS-TYEMVGGLDKQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLA 199
Query: 431 RALACAASKAGQKVSFYMRKGADVLSKWVGEAERQLKLLFEEAQRNQPSIIFFDEIDGLA 490
RA+A + +F G++++ K++GE R ++ LF A+ + PSIIF DEID +
Sbjct: 200 RAVAHHT-----ECTFIRVSGSELVQKFIGEGSRMVRELFVMAREHAPSIIFMDEIDSIG 254
Query: 491 PVRSSKQEQIHNSIVSTLLALM---DGLDSRGQVVLIGATNRVDAIDGALRRPGRFDREF 547
R + + T+L L+ DG ++ + +I ATNR+D +D AL RPGR DR+
Sbjct: 255 SSRIESGSGGDSEVQRTMLELLNQLDGFEATKNIKVIMATNRIDILDPALLRPGRIDRKI 314
Query: 548 NFPLPGCEARAEILDIHTRKWKQPPSRELKSELAASCVGYCGADLKALCTEAAIRAFREK 607
FP P EAR +IL IH+RK L+ ++A G GA++K +CTEA + A RE+
Sbjct: 315 EFPPPNEEARLDILKIHSRKMNLTRGINLR-KIAELMPGASGAEVKGVCTEAGMYALRER 373
Query: 608 YPQVYTSDDKFLIDVDSV 625
+V+ + + F + V V
Sbjct: 374 --RVHVTQEDFEMAVAKV 389
>WB|WBGene00004506 [details] [associations]
symbol:rpt-6 species:6239 "Caenorhabditis elegans"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0006310 "DNA recombination" evidence=IEA]
[GO:0009378 "four-way junction helicase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=IEA] [GO:0009792 "embryo
development ending in birth or egg hatching" evidence=IMP]
[GO:0040010 "positive regulation of growth rate" evidence=IMP]
[GO:0040007 "growth" evidence=IMP] [GO:0002119 "nematode larval
development" evidence=IMP] [GO:0040011 "locomotion" evidence=IMP]
[GO:0007091 "metaphase/anaphase transition of mitotic cell cycle"
evidence=IMP] [GO:0008340 "determination of adult lifespan"
evidence=IMP] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0008340 GO:GO:0009792
GO:GO:0005737 GO:GO:0040007 GO:GO:0040010 GO:GO:0002119
GO:GO:0040011 GO:GO:0030163 HSSP:Q01853 GO:GO:0017111 EMBL:Z98866
GO:GO:0007091 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 KO:K03066 GeneTree:ENSGT00550000074947
PIR:T27048 RefSeq:NP_499609.1 ProteinModelPortal:Q9XTT9 SMR:Q9XTT9
DIP:DIP-27139N IntAct:Q9XTT9 MINT:MINT-210855 STRING:Q9XTT9
PaxDb:Q9XTT9 EnsemblMetazoa:Y49E10.1.1 EnsemblMetazoa:Y49E10.1.2
GeneID:176661 KEGG:cel:CELE_Y49E10.1 UCSC:Y49E10.1 CTD:176661
WormBase:Y49E10.1 InParanoid:Q9XTT9 OMA:IDDQIRE NextBio:893504
Uniprot:Q9XTT9
Length = 416
Score = 428 (155.7 bits), Expect = 3.2e-39, P = 3.2e-39
Identities = 96/258 (37%), Positives = 156/258 (60%)
Query: 371 QVDESVSFDDIGGLSEYIDALKEMVFFPLLYPDFFASYHITPPRGVLLCGPPGTGKTLIA 430
+V +S +++ +GGL + I +KE++ P+ +P+ F + I P+GVLL GPPGTGKTL+A
Sbjct: 152 KVPDS-TYEMVGGLDKQIKEIKEVIELPVKHPELFDALGIAQPKGVLLFGPPGTGKTLLA 210
Query: 431 RALACAASKAGQKVSFYMRKGADVLSKWVGEAERQLKLLFEEAQRNQPSIIFFDEIDGLA 490
RA+A + +F G++++ K++GE R ++ LF A+ + PSIIF DEID +
Sbjct: 211 RAVAHHT-----ECTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPSIIFMDEIDSIG 265
Query: 491 PVRSSKQEQIHNSIVSTLLALM---DGLDSRGQVVLIGATNRVDAIDGALRRPGRFDREF 547
R + + T+L L+ DG ++ + +I ATNR+D +D AL RPGR DR+
Sbjct: 266 SSRVEGSSGGDSEVQRTMLELLNQLDGFEATKNIKVIMATNRIDILDPALLRPGRIDRKI 325
Query: 548 NFPLPGCEARAEILDIHTRKWKQPPSRELKSELAASCVGYCGADLKALCTEAAIRAFREK 607
FP P +ARA+IL IH+RK + +++A G GA++K++CTEA + A RE+
Sbjct: 326 EFPAPDEKARADILKIHSRKMNLMRGINM-AKIAEQIPGASGAEVKSVCTEAGMFALRER 384
Query: 608 YPQVYTSDDKFLIDVDSV 625
+++ + + F + V V
Sbjct: 385 --RIHVTQEDFEMAVGKV 400
>WB|WBGene00010562 [details] [associations]
symbol:cdc-48.3 species:6239 "Caenorhabditis elegans"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0040010 "positive regulation of growth
rate" evidence=IMP] [GO:0009792 "embryo development ending in birth
or egg hatching" evidence=IMP] [GO:0002119 "nematode larval
development" evidence=IMP] [GO:0040007 "growth" evidence=IMP]
[GO:0006898 "receptor-mediated endocytosis" evidence=IMP]
[GO:0000003 "reproduction" evidence=IMP] [GO:0007091
"metaphase/anaphase transition of mitotic cell cycle" evidence=IMP]
[GO:0007052 "mitotic spindle organization" evidence=IMP]
[GO:0007067 "mitosis" evidence=IMP] [GO:0019901 "protein kinase
binding" evidence=IPI] [GO:0016887 "ATPase activity" evidence=IDA]
[GO:0006469 "negative regulation of protein kinase activity"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0006200
"ATP catabolic process" evidence=IDA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0009792 GO:GO:0006898
GO:GO:0005737 GO:GO:0040007 GO:GO:0040010 GO:GO:0007052
GO:GO:0002119 GO:GO:0006469 GO:GO:0000003 GO:GO:0016887 HSSP:Q01853
eggNOG:COG0464 HOGENOM:HOG000223225 GeneTree:ENSGT00700000104502
GO:GO:0007091 EMBL:Z75712 KO:K13525 PIR:T23322 RefSeq:NP_492211.1
ProteinModelPortal:Q21222 SMR:Q21222 PaxDb:Q21222
EnsemblMetazoa:K04G2.3 GeneID:172586 KEGG:cel:CELE_K04G2.3
UCSC:K04G2.3 CTD:172586 WormBase:K04G2.3 InParanoid:Q21222
OMA:QVAPTIV NextBio:876139 Uniprot:Q21222
Length = 724
Score = 447 (162.4 bits), Expect = 3.3e-39, P = 3.3e-39
Identities = 99/234 (42%), Positives = 143/234 (61%)
Query: 375 SVSFDDIGGLSEYIDALKEMVFFPLLYPDFFASYHITPPRGVLLCGPPGTGKTLIARALA 434
+VS++DIGG E +++ V +P +P+ F + I PP G+LL GPPG KTLIARALA
Sbjct: 455 NVSWNDIGGNEELKLEIQQAVIWPQKHPEAFERFGIDPPAGILLYGPPGCSKTLIARALA 514
Query: 435 CAASKAGQKVSFYMRKGADVLSKWVGEAERQLKLLFEEAQRNQPSIIFFDEIDGLAPVRS 494
A K++F KG ++ SKWVG++E+ ++ LF A++ P+I+FFDEID + R
Sbjct: 515 SEA-----KMNFLAVKGPELFSKWVGDSEKAIRDLFSRARQVAPTIVFFDEIDAVGSSRG 569
Query: 495 S-KQEQIHNSIVSTLLALMDGLDSRGQVVLIGATNRVDAIDGALRRPGRFDREFNFPLPG 553
S K + + +++ LL +DGL+ +V+L+ ATNR D +D AL RPGR DR LP
Sbjct: 570 SEKSSGVSDRVLAQLLTELDGLEKSSRVILLAATNRPDQLDSALLRPGRLDRAIYVGLP- 628
Query: 554 CEA-RAEILDIHTRKWKQPPSRELKSELAASCVGYCGADLKALCTEAAIRAFRE 606
CE R IL++ T+K K + +L GY GA+L A+C AA+ A RE
Sbjct: 629 CEVTRRAILEMRTKKMKFDDTVRTIDKLVEKTSGYSGAELVAVCRTAAMFAMRE 682
>FB|FBgn0036224 [details] [associations]
symbol:Rpt4R "Regulatory particle triple-A ATPase 4-related"
species:7227 "Drosophila melanogaster" [GO:0005838 "proteasome
regulatory particle" evidence=ISS] [GO:0016887 "ATPase activity"
evidence=ISS] [GO:0030163 "protein catabolic process" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0006974 "response to DNA damage stimulus"
evidence=IMP] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 EMBL:AE014296
GO:GO:0006200 GO:GO:0006974 GO:GO:0016887 GO:GO:0030163 HSSP:Q01853
KO:K03064 eggNOG:COG1222 TIGRFAMs:TIGR01242
GeneTree:ENSGT00550000074826 EMBL:AY089267 RefSeq:NP_648525.1
UniGene:Dm.5141 SMR:Q9VTQ9 IntAct:Q9VTQ9 MINT:MINT-869141
STRING:Q9VTQ9 EnsemblMetazoa:FBtr0076040 GeneID:39351
KEGG:dme:Dmel_CG7257 UCSC:CG7257-RA CTD:39351 FlyBase:FBgn0036224
InParanoid:Q9VTQ9 OMA:CAIWTEA OrthoDB:EOG4VT4CM GenomeRNAi:39351
NextBio:813228 Uniprot:Q9VTQ9
Length = 398
Score = 427 (155.4 bits), Expect = 4.1e-39, P = 4.1e-39
Identities = 97/234 (41%), Positives = 140/234 (59%)
Query: 375 SVSFDDIGGLSEYIDALKEMVFFPLLYPDFFASYHITPPRGVLLCGPPGTGKTLIARALA 434
+V++ +IGGL + I L+E++ PLL PD F I+PP+G LL GPPGTGKTL+ARA+A
Sbjct: 138 NVNYAEIGGLGQQIRELREVIELPLLNPDIFLRVGISPPKGCLLYGPPGTGKTLLARAIA 197
Query: 435 CAASKAGQKVSFYMRKGADVLSKWVGEAERQLKLLFEEAQRNQPSIIFFDEIDGLAPVRS 494
+ +F + ++ K++GE+ R ++ +F A+ +QP IIF DEID + R
Sbjct: 198 -----SQMDANFLKVVSSAIVDKYIGESARLIREMFAYARDHQPCIIFMDEIDAIGGRRF 252
Query: 495 SKQEQIHNSIVSTLLAL---MDGLDSRGQVVLIGATNRVDAIDGALRRPGRFDREFNFPL 551
S+ I TL+ L MDG D+ GQV +I ATNR D +D AL RPGR DR+ PL
Sbjct: 253 SEGTSADREIQRTLMELLNQMDGFDALGQVKMIMATNRPDTLDPALLRPGRLDRKLEIPL 312
Query: 552 PGCEARAEILDIHTRKWKQPPSRELKSELAASCVGYCGADLKALCTEAAIRAFR 605
P AR +IL IH + + ++ + S + + GADL+ +CTEA + A R
Sbjct: 313 PNEVARMDILKIHAEPLNKRGEIDYEAVVKLSDL-FNGADLRNICTEAGLFALR 365
>WB|WBGene00018991 [details] [associations]
symbol:F56F11.4 species:6239 "Caenorhabditis elegans"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0006310 "DNA recombination" evidence=IEA]
[GO:0009378 "four-way junction helicase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=IEA] [GO:0009792 "embryo
development ending in birth or egg hatching" evidence=IMP]
[GO:0002119 "nematode larval development" evidence=IMP] [GO:0040007
"growth" evidence=IMP] [GO:0000003 "reproduction" evidence=IMP]
[GO:0040035 "hermaphrodite genitalia development" evidence=IMP]
[GO:0040011 "locomotion" evidence=IMP] [GO:0040017 "positive
regulation of locomotion" evidence=IMP] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0009792 GO:GO:0005737 GO:GO:0040007 GO:GO:0002119
GO:GO:0040011 GO:GO:0040017 GO:GO:0040035 GO:GO:0030163 HSSP:Q01853
GO:GO:0017111 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 KO:K03066 GeneTree:ENSGT00550000074947
EMBL:FO081497 RefSeq:NP_741098.1 ProteinModelPortal:Q8MXF1
SMR:Q8MXF1 STRING:Q8MXF1 PaxDb:Q8MXF1 PRIDE:Q8MXF1
EnsemblMetazoa:F56F11.4b GeneID:175403 KEGG:cel:CELE_F56F11.4
UCSC:F56F11.4b CTD:175403 WormBase:F56F11.4b InParanoid:Q8MXF1
OMA:TITISEN NextBio:888008 ArrayExpress:Q8MXF1 Uniprot:Q8MXF1
Length = 432
Score = 427 (155.4 bits), Expect = 4.1e-39, P = 4.1e-39
Identities = 96/258 (37%), Positives = 154/258 (59%)
Query: 371 QVDESVSFDDIGGLSEYIDALKEMVFFPLLYPDFFASYHITPPRGVLLCGPPGTGKTLIA 430
+V +S +++ +GGL I +KE++ P+ +P+ F + I P+GVLL GPPGTGKTL+A
Sbjct: 168 KVPDS-TYEMVGGLDTQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLA 226
Query: 431 RALACAASKAGQKVSFYMRKGADVLSKWVGEAERQLKLLFEEAQRNQPSIIFFDEIDGLA 490
RA+A + +F G++++ K++GE R ++ LF A+ + PSIIF DEID +
Sbjct: 227 RAVAHHT-----ECTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPSIIFMDEIDSIG 281
Query: 491 PVRSSKQEQIHNSIVSTLLALM---DGLDSRGQVVLIGATNRVDAIDGALRRPGRFDREF 547
R + + T+L L+ DG ++ + +I ATNR+D +D AL RPGR DR+
Sbjct: 282 SSRVEGSRGGDSEVQRTMLELLNQLDGFEATKNIKVIMATNRIDILDSALLRPGRIDRKI 341
Query: 548 NFPLPGCEARAEILDIHTRKWKQPPSRELKSELAASCVGYCGADLKALCTEAAIRAFREK 607
FP P +ARA+IL IH+RK + ++A G GA++K++CTEA + A RE+
Sbjct: 342 EFPAPDEKARAQILKIHSRKMNLMRGIRM-DKIAEQIPGASGAEVKSVCTEAGMFALRER 400
Query: 608 YPQVYTSDDKFLIDVDSV 625
+++ + + F + V V
Sbjct: 401 --RIHVTQEDFEMAVGKV 416
>UNIPROTKB|Q9FXT8 [details] [associations]
symbol:OsRPT4 "Os02g0199900 protein" species:39947 "Oryza
sativa Japonica Group" [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005886 GO:GO:0005524 GO:GO:0005737 GO:GO:0005618
GO:GO:0005730 GO:GO:0030163 HSSP:Q01853 GO:GO:0017111 EMBL:AP008208
EMBL:CM000139 KO:K03064 EMBL:AP004869 TIGRFAMs:TIGR01242
OMA:EHKEVES GO:GO:0008540 ProtClustDB:CLSN2679874 EMBL:AP004812
EMBL:AB033536 RefSeq:NP_001046218.1 UniGene:Os.292 IntAct:Q9FXT8
STRING:Q9FXT8 EnsemblPlants:LOC_Os02g10640.1 GeneID:4328642
KEGG:osa:4328642 Uniprot:Q9FXT8
Length = 400
Score = 426 (155.0 bits), Expect = 5.2e-39, P = 5.2e-39
Identities = 99/245 (40%), Positives = 140/245 (57%)
Query: 375 SVSFDDIGGLSEYIDALKEMVFFPLLYPDFFASYHITPPRGVLLCGPPGTGKTLIARALA 434
+VS+ +GGLS+ I L+E + PL+ P+ F I PP+GVLL GPPGTGKTL+ARA+A
Sbjct: 136 NVSYSAVGGLSDQIRELRESIELPLMNPELFLRVGIKPPKGVLLYGPPGTGKTLLARAIA 195
Query: 435 CAASKAGQKVSFYMRKGADVLSKWVGEAERQLKLLFEEAQRNQPSIIFFDEIDGLAPVRS 494
+ +F + ++ K++GE+ R ++ +F A+ +QP IIF DEID + R
Sbjct: 196 -----SNIDANFLKIVSSAIIDKYIGESARLIREMFGYARDHQPCIIFMDEIDAIGGRRF 250
Query: 495 SKQEQIHNSIVSTLLALM---DGLDSRGQVVLIGATNRVDAIDGALRRPGRFDREFNFPL 551
S+ I TL+ L+ DG D G+V +I ATNR D +D AL RPGR DR+ PL
Sbjct: 251 SEGTSADREIQRTLMELLNQLDGFDELGKVKMIMATNRPDVLDPALLRPGRLDRKIEIPL 310
Query: 552 PGCEARAEILDIHTRKWKQPPSRELKSELAASCV-GYCGADLKALCTEAAIRAFREKYPQ 610
P +AR E+L IH + E+ E G+ GADL+ +CTEA + A R +
Sbjct: 311 PNEQARMEVLKIHAAGIAK--HGEIDYEAVVKLAEGFNGADLRNVCTEAGMAAIRAERDY 368
Query: 611 VYTSD 615
V D
Sbjct: 369 VVHED 373
>WB|WBGene00015688 [details] [associations]
symbol:C10G11.8 species:6239 "Caenorhabditis elegans"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0006310 "DNA recombination" evidence=IEA]
[GO:0009378 "four-way junction helicase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005737 GO:GO:0030163 GO:GO:0017111 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 KO:K03062
GeneTree:ENSGT00550000074818 HSSP:Q9LCZ4 EMBL:FO080499 PIR:D87802
RefSeq:NP_491811.1 ProteinModelPortal:P91025 SMR:P91025
STRING:P91025 PaxDb:P91025 EnsemblMetazoa:C10G11.8 GeneID:172324
KEGG:cel:CELE_C10G11.8 UCSC:C10G11.8 CTD:172324 WormBase:C10G11.8
InParanoid:P91025 OMA:RGIENAN NextBio:875027 Uniprot:P91025
Length = 438
Score = 426 (155.0 bits), Expect = 5.2e-39, P = 5.2e-39
Identities = 103/256 (40%), Positives = 145/256 (56%)
Query: 377 SFDDIGGLSEYIDALKEMVFFPLLYPDFFASYHITPPRGVLLCGPPGTGKTLIARALACA 436
+FDDIGG I LKE V PL +P+++ IT P+GV+L G PGTGKTL+A+A+A +
Sbjct: 181 TFDDIGGCESQIQELKESVELPLTHPEYYEEMGITAPKGVILYGEPGTGKTLLAKAVANS 240
Query: 437 ASKAGQKVSFYMRKGADVLSKWVGEAERQLKLLFEEAQRNQPSIIFFDEIDGLAPVR--- 493
S +F G+D++ K GE R ++ +F+ A+ PSI+F DEID + R
Sbjct: 241 TS-----ATFIRATGSDLVQKQSGEGARLVRQIFQMAKEQAPSIVFIDEIDAVGTKRFDT 295
Query: 494 SSKQEQIHNSIVSTLLALMDGLDSRGQVVLIGATNRVDAIDGALRRPGRFDREFNFPLPG 553
SS+ EQ + LL +DG +SRG V +I ATNR+D++D AL RPGR DR+ P P
Sbjct: 296 SSRGEQEVQRTLLELLNQLDGFESRGDVKIIMATNRIDSLDPALIRPGRIDRKIELPKPD 355
Query: 554 CEARAEILDIHTRKWKQPPSRELKSELAASCVGYCGADLKALCTEAAIRAFREKYPQVYT 613
+ R +I IHT + ++ L GA++KA+CTEA + A R + V T
Sbjct: 356 EKTRQKIFTIHTSGMTIQKAVTYENVLGKE-KSISGAEIKAVCTEAGMLALRAQRKCVGT 414
Query: 614 SDDKFLIDVDSVTVEK 629
D F V SV + K
Sbjct: 415 DD--FEKAVKSVMLSK 428
>FB|FBgn0032450 [details] [associations]
symbol:CG5776 species:7227 "Drosophila melanogaster"
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0005783
"endoplasmic reticulum" evidence=ISS] [GO:0005524 "ATP binding"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 EMBL:AE014134 GO:GO:0006200 GO:GO:0016887 HSSP:Q01853
eggNOG:COG0464 KO:K14575 GeneTree:ENSGT00700000104502 OMA:MLLRCVA
EMBL:AY051725 RefSeq:NP_609585.1 UniGene:Dm.8715 SMR:Q9VK63
EnsemblMetazoa:FBtr0080407 EnsemblMetazoa:FBtr0329925 GeneID:34680
KEGG:dme:Dmel_CG5776 UCSC:CG5776-RA FlyBase:FBgn0032450
InParanoid:Q9VK63 OrthoDB:EOG4547DV GenomeRNAi:34680 NextBio:789659
Uniprot:Q9VK63
Length = 799
Score = 447 (162.4 bits), Expect = 5.5e-39, P = 5.5e-39
Identities = 100/240 (41%), Positives = 146/240 (60%)
Query: 375 SVSFDDIGGLSEYIDALKEMVFFPLLYPDFFASYHITPPRGVLLCGPPGTGKTLIARALA 434
+V + DIGG SE A+++ + +PLL+ D F I PPRG+L+ GPPG KT+IA+ALA
Sbjct: 531 NVQWSDIGGQSELRLAMQQAIEWPLLHADKFQRLGIKPPRGILMFGPPGCSKTMIAKALA 590
Query: 435 CAASKAGQKVSFYMRKGADVLSKWVGEAERQLKLLFEEAQRNQPSIIFFDEIDGLAPVRS 494
+ K++F KG ++ S WVGE+ER ++ +F +A++ P+I+FFDEID + RS
Sbjct: 591 TES-----KLNFLSIKGPELFSMWVGESERAVREVFRKARQVAPAIVFFDEIDAIGGERS 645
Query: 495 -----SKQEQIHNSIVSTLLALMDGLDSRGQVVLIGATNRVDAIDGALRRPGRFDREFNF 549
S + +++ LL +DG+++ V ++ ATNR D ID AL RPGR DR
Sbjct: 646 EGDGSSSGSSVKERVLTQLLTELDGVEALQNVTIVAATNRPDMIDKALLRPGRIDRILYV 705
Query: 550 PLPGCEARAEILDIHTRKWKQPPSRELKSE-LAASCVGYCGADLKALCTEAAIRAFREKY 608
LP CEAR EIL I R P S ++ E L GY GA+++A+C EAA+RA + +
Sbjct: 706 GLPQCEARREILKIKLRA--MPISNDVDMEKLVQLTEGYSGAEIQAVCHEAALRALEQSF 763
Score = 232 (86.7 bits), Expect = 8.9e-16, Sum P(2) = 8.9e-16
Identities = 62/241 (25%), Positives = 116/241 (48%)
Query: 371 QVDESVSFDDIGGLSEYIDALKEMVFFPLLYPDFFASYHITPPRGVLLCGPPGTGKTLIA 430
++ ++ IGGL + ++E + + L + A ++ RG+LL G G GK+++
Sbjct: 264 KISHRITKCQIGGLDRQLQLVEESMEYALGFRTLPAGLRVS--RGLLLYGATGCGKSMVL 321
Query: 431 RALACAASKAGQ-KVSFYMRKGADVLSKWVGEAERQLKLLFEEAQRN--QPSIIFFDEID 487
A+ A + Q V +V SK++GE E++L +FE A + P+++ +++
Sbjct: 322 EAMCAVAEERSQGHVQLIRINSGEVYSKFLGETEQKLGAIFERAYNHYPHPTLLLIEDVH 381
Query: 488 GLAPVRSSKQEQIHNSIVSTLLALMDGLDSRGQV-----VLIGATNRVDAIDGALRRPGR 542
L P + + + L+L+D L S Q+ ++ ++++D + ++RR GR
Sbjct: 382 NLCP--KQENSDLVKRVSLAFLSLLDQLSSPSQLKGSKTFVLATSSQIDTLHPSIRRAGR 439
Query: 543 FDREFNFPLPGCEARAEILDIHTRKWKQPPSRELKSELAASCVGYCGADLKALCTEAAIR 602
D E P +AR EI+ + + S E +A+ GY GADL L A ++
Sbjct: 440 LDNEVELGAPSSQARLEIVRCLIKSVEHQLSDEEVEHVASITHGYVGADLANLVYAAMLQ 499
Query: 603 A 603
A
Sbjct: 500 A 500
Score = 53 (23.7 bits), Expect = 8.9e-16, Sum P(2) = 8.9e-16
Identities = 19/72 (26%), Positives = 35/72 (48%)
Query: 704 PR-LLLCGSEGTGVDHLGPAILHELEKFPVHSLGLPALLSDPSAKTPEEALVHIFGEARR 762
PR +L+ G G + A+ E K S+ P L S ++ E A+ +F +AR+
Sbjct: 569 PRGILMFGPPGCSKTMIAKALATE-SKLNFLSIKGPELFSMWVGES-ERAVREVFRKARQ 626
Query: 763 TTPSILYIPQFN 774
P+I++ + +
Sbjct: 627 VAPAIVFFDEID 638
>ASPGD|ASPL0000049719 [details] [associations]
symbol:AN2213 species:162425 "Emericella nidulans"
[GO:0005524 "ATP binding" evidence=IEA] [GO:0070682 "proteasome
regulatory particle assembly" evidence=IEA] [GO:0043161
"proteasomal ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0045732 "positive regulation of protein catabolic
process" evidence=IEA] [GO:0043171 "peptide catabolic process"
evidence=IEA] [GO:0016887 "ATPase activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] [GO:0008540 "proteasome regulatory particle, base
subcomplex" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 EMBL:BN001307
GO:GO:0030163 GO:GO:0000502 GO:GO:0017111 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 KO:K03062 OMA:FIRNQER
OrthoDB:EOG4FN7S6 EMBL:AACD01000035 RefSeq:XP_659817.1
ProteinModelPortal:Q5BB67 STRING:Q5BB67
EnsemblFungi:CADANIAT00008897 GeneID:2875757 KEGG:ani:AN2213.2
Uniprot:Q5BB67
Length = 460
Score = 407 (148.3 bits), Expect = 5.5e-39, Sum P(2) = 5.5e-39
Identities = 91/242 (37%), Positives = 135/242 (55%)
Query: 377 SFDDIGGLSEYIDALKEMVFFPLLYPDFFASYHITPPRGVLLCGPPGTGKTLIARALACA 436
S+ DIGGL I ++E V PLL+P+ + I PP+GV+L G PGTGKTL+A+A+A
Sbjct: 202 SYADIGGLESQIQEVRESVELPLLHPELYEEMGIKPPKGVILYGAPGTGKTLLAKAVANQ 261
Query: 437 ASKAGQKVSFYMRKGADVLSKWVGEAERQLKLLFEEAQRNQPSIIFFDEIDGLAPVRSSK 496
S +F G++++ K++G+ R ++ +F+ A + PSI+F DEID + R
Sbjct: 262 TS-----ATFLRIVGSELIQKYLGDGPRLVRQIFQVAAEHAPSIVFIDEIDAIGTKRYDS 316
Query: 497 QEQIHNSIVSTLLALM---DGLDSRGQVVLIGATNRVDAIDGALRRPGRFDREFNFPLPG 553
I T+L L+ DG D RG V +I ATN+++ +D AL RPGR DR+ F P
Sbjct: 317 TSGGEREIQRTMLELLNQLDGFDDRGDVKVIMATNKIETLDPALIRPGRIDRKILFENPD 376
Query: 554 CEARAEILDIHTRKWKQPPSRELKSELAASCVGYCGADLKALCTEAAIRAFREKYPQVYT 613
+ +I +HT K +L E GAD++A+CTEA + A RE+ +V
Sbjct: 377 QNTKKKIFTLHTSKMSLGDDVDL-DEFINQKDDLSGADIRAICTEAGLMALRERRMRVQM 435
Query: 614 SD 615
D
Sbjct: 436 DD 437
Score = 45 (20.9 bits), Expect = 5.5e-39, Sum P(2) = 5.5e-39
Identities = 10/36 (27%), Positives = 18/36 (50%)
Query: 360 SSKGGADIQPLQVDESVSFDDIGGLSEYIDALKEMV 395
+++G DI DE DD+ G + L+E++
Sbjct: 100 ANRGDVDITDRNADERSRVDDMRGSPMGVGNLEELI 135
>CGD|CAL0005257 [details] [associations]
symbol:RPT2 species:5476 "Candida albicans" [GO:0005634
"nucleus" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0008540 "proteasome regulatory particle, base subcomplex"
evidence=IEA] [GO:0070682 "proteasome regulatory particle assembly"
evidence=IEA] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=IEA] [GO:0045732 "positive regulation
of protein catabolic process" evidence=IEA] [GO:0043171 "peptide
catabolic process" evidence=IEA] [GO:0016887 "ATPase activity"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 CGD:CAL0005257 GO:GO:0005524 GO:GO:0005737
GO:GO:0030163 GO:GO:0017111 EMBL:AACQ01000051 EMBL:AACQ01000050
eggNOG:COG1222 TIGRFAMs:TIGR01242 KO:K03062 RefSeq:XP_717718.1
RefSeq:XP_717812.1 ProteinModelPortal:Q5A7M6 STRING:Q5A7M6
GeneID:3640525 GeneID:3640683 KEGG:cal:CaO19.12895
KEGG:cal:CaO19.5440 Uniprot:Q5A7M6
Length = 465
Score = 425 (154.7 bits), Expect = 6.7e-39, P = 6.7e-39
Identities = 97/256 (37%), Positives = 143/256 (55%)
Query: 367 IQPLQVDESV--SFDDIGGLSEYIDALKEMVFFPLLYPDFFASYHITPPRGVLLCGPPGT 424
+ +++D+S S+ DIGGL I +KE V PL +P+ + I PP+GV+L G PGT
Sbjct: 172 VSVMKLDKSPTESYADIGGLESQIQEIKESVELPLTHPELYEEMGIKPPKGVILYGAPGT 231
Query: 425 GKTLIARALACAASKAGQKVSFYMRKGADVLSKWVGEAERQLKLLFEEAQRNQPSIIFFD 484
GKTL+A+A+A S +F G++++ K++G+ R + +F+ A + PSI+F D
Sbjct: 232 GKTLLAKAVANQTS-----ATFLRIVGSELIQKYLGDGPRLCRQIFQIAADHAPSIVFID 286
Query: 485 EIDGLAPVRSSKQEQIHNSIVSTLLALM---DGLDSRGQVVLIGATNRVDAIDGALRRPG 541
EID + R I T+L L+ DG D RG + +I ATN+++++D AL RPG
Sbjct: 287 EIDAIGTKRYESTSGGEREIQRTMLELLNQLDGFDDRGDIKVIMATNKIESLDPALIRPG 346
Query: 542 RFDREFNFPLPGCEARAEILDIHTRKWKQPPSRELKSELAASCVGYCGADLKALCTEAAI 601
R DR+ F P + +IL IHT K L E+ GAD+KA+CTEA +
Sbjct: 347 RIDRKILFENPDANTKKKILTIHTSKMSLADDVNL-DEIVTGKDDLSGADIKAICTEAGL 405
Query: 602 RAFREKYPQVYTSDDK 617
A RE+ QV D K
Sbjct: 406 LALRERRMQVKAEDFK 421
>GENEDB_PFALCIPARUM|PF13_0033 [details] [associations]
symbol:PF13_0033 "26S proteasome regulatory
subunit, putative" species:5833 "Plasmodium falciparum" [GO:0005838
"proteasome regulatory particle" evidence=ISS] [GO:0004175
"endopeptidase activity" evidence=ISS] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=ISS]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005737 GO:GO:0004175 GO:GO:0006511 HSSP:Q01853
GO:GO:0017111 EMBL:AL844509 KO:K03064 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 OMA:EHKEVES ProtClustDB:CLSZ2429012
GO:GO:0005838 RefSeq:XP_001349791.1 ProteinModelPortal:Q8IEQ1
PRIDE:Q8IEQ1 EnsemblProtists:PF13_0033:mRNA GeneID:814012
KEGG:pfa:PF13_0033 EuPathDB:PlasmoDB:PF3D7_1306400 Uniprot:Q8IEQ1
Length = 393
Score = 423 (154.0 bits), Expect = 1.1e-38, P = 1.1e-38
Identities = 100/237 (42%), Positives = 140/237 (59%)
Query: 376 VSFDDIGGLSEYIDALKEMVFFPLLYPDFFASYHITPPRGVLLCGPPGTGKTLIARALAC 435
V+++ IGGLSE I ++E+V P+L P + I P+GVLL GPPGTGKTL+ARA+A
Sbjct: 134 VNYNQIGGLSEQIRQMREVVELPILNPYLYKRVGIKTPKGVLLYGPPGTGKTLLARAMA- 192
Query: 436 AASKAGQKVSFYMRKGADVLSKWVGEAERQLKLLFEEAQRNQPSIIFFDEIDGLAPVRSS 495
+ +F + ++ K++GE+ R ++ +F A+ +QP IIF DEID + R S
Sbjct: 193 ----SNINCNFMRIVVSAIVDKYIGESARIIREMFNYAKEHQPCIIFMDEIDAIGGRRFS 248
Query: 496 KQEQIHNSIVSTLLALM---DGLDSRGQVVLIGATNRVDAIDGALRRPGRFDREFNFPLP 552
+ I TL+ L+ DG + G V +I ATNR D +D AL RPGR DR+ PLP
Sbjct: 249 QGTSADREIQRTLMELLNHLDGFEELGNVKIIMATNRPDVLDPALVRPGRLDRKIEIPLP 308
Query: 553 GCEARAEILDIHTRKWKQPPSRELKSELAASCVGYCGADLKALCTEA---AIRAFRE 606
AR EIL IH K + + +S + C G+ GADL+ +CTEA AIRA R+
Sbjct: 309 NETARIEILKIHANKMTKLGDIDYES-VCRLCDGFNGADLRNVCTEAGMFAIRAMRD 364
>UNIPROTKB|P46470 [details] [associations]
symbol:psmc5 "26S protease regulatory subunit 8"
species:8355 "Xenopus laevis" [GO:0022624 "proteasome accessory
complex" evidence=ISS] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0030163 GO:GO:0017111 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109
GO:GO:0022624 KO:K03066 CTD:5705 EMBL:X81986 RefSeq:NP_001081635.1
UniGene:Xl.45 ProteinModelPortal:P46470 PRIDE:P46470 GeneID:397968
KEGG:xla:397968 Uniprot:P46470
Length = 461
Score = 423 (154.0 bits), Expect = 1.1e-38, P = 1.1e-38
Identities = 99/258 (38%), Positives = 155/258 (60%)
Query: 371 QVDESVSFDDIGGLSEYIDALKEMVFFPLLYPDFFASYHITPPRGVLLCGPPGTGKTLIA 430
+V +S +++ IGGL + I +KE++ P+ +P+ F + I P+GVLL GPPGTGKTL+A
Sbjct: 137 KVPDS-TYEMIGGLDKQIKEIKEVIELPVKHPEHFEALGIAQPKGVLLYGPPGTGKTLLA 195
Query: 431 RALACAASKAGQKVSFYMRKGADVLSKWVGEAERQLKLLFEEAQRNQPSIIFFDEIDGLA 490
RA+A +VS G++++ K++GE R ++ LF A+ + PSIIF DEID +
Sbjct: 196 RAVAHHTDCTFIRVS-----GSELVQKFIGEGARMVRELFVMAREHAPSIIFMDEIDSIG 250
Query: 491 PVR---SSKQEQIHNSIVSTLLALMDGLDSRGQVVLIGATNRVDAIDGALRRPGRFDREF 547
S ++ +++ LL +DG ++ + +I ATNR+D +D AL RPGR DR+
Sbjct: 251 SRLEGGSGGDSEVQRTMLE-LLNQLDGFEATKNIKVIMATNRIDILDSALLRPGRIDRKI 309
Query: 548 NFPLPGCEARAEILDIHTRKWKQPPSRELKSELAASCVGYCGADLKALCTEAAIRAFREK 607
FP P EAR +IL IH+RK L+ ++A G GA++K +CTEA + A RE+
Sbjct: 310 EFPPPNEEARLDILKIHSRKMNLTRGINLR-KIAELMPGASGAEVKGVCTEAGMYALRER 368
Query: 608 YPQVYTSDDKFLIDVDSV 625
+V+ + + F + V V
Sbjct: 369 --RVHVTQEDFEMAVAKV 384
>UNIPROTKB|Q8IEQ1 [details] [associations]
symbol:PF13_0033 "26S proteasome regulatory subunit,
putative" species:36329 "Plasmodium falciparum 3D7" [GO:0004175
"endopeptidase activity" evidence=ISS] [GO:0005838 "proteasome
regulatory particle" evidence=ISS] [GO:0006511 "ubiquitin-dependent
protein catabolic process" evidence=ISS] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005737 GO:GO:0004175 GO:GO:0006511 HSSP:Q01853 GO:GO:0017111
EMBL:AL844509 KO:K03064 TIGRFAMs:TIGR01242 HOGENOM:HOG000225143
OMA:EHKEVES ProtClustDB:CLSZ2429012 GO:GO:0005838
RefSeq:XP_001349791.1 ProteinModelPortal:Q8IEQ1 PRIDE:Q8IEQ1
EnsemblProtists:PF13_0033:mRNA GeneID:814012 KEGG:pfa:PF13_0033
EuPathDB:PlasmoDB:PF3D7_1306400 Uniprot:Q8IEQ1
Length = 393
Score = 423 (154.0 bits), Expect = 1.1e-38, P = 1.1e-38
Identities = 100/237 (42%), Positives = 140/237 (59%)
Query: 376 VSFDDIGGLSEYIDALKEMVFFPLLYPDFFASYHITPPRGVLLCGPPGTGKTLIARALAC 435
V+++ IGGLSE I ++E+V P+L P + I P+GVLL GPPGTGKTL+ARA+A
Sbjct: 134 VNYNQIGGLSEQIRQMREVVELPILNPYLYKRVGIKTPKGVLLYGPPGTGKTLLARAMA- 192
Query: 436 AASKAGQKVSFYMRKGADVLSKWVGEAERQLKLLFEEAQRNQPSIIFFDEIDGLAPVRSS 495
+ +F + ++ K++GE+ R ++ +F A+ +QP IIF DEID + R S
Sbjct: 193 ----SNINCNFMRIVVSAIVDKYIGESARIIREMFNYAKEHQPCIIFMDEIDAIGGRRFS 248
Query: 496 KQEQIHNSIVSTLLALM---DGLDSRGQVVLIGATNRVDAIDGALRRPGRFDREFNFPLP 552
+ I TL+ L+ DG + G V +I ATNR D +D AL RPGR DR+ PLP
Sbjct: 249 QGTSADREIQRTLMELLNHLDGFEELGNVKIIMATNRPDVLDPALVRPGRLDRKIEIPLP 308
Query: 553 GCEARAEILDIHTRKWKQPPSRELKSELAASCVGYCGADLKALCTEA---AIRAFRE 606
AR EIL IH K + + +S + C G+ GADL+ +CTEA AIRA R+
Sbjct: 309 NETARIEILKIHANKMTKLGDIDYES-VCRLCDGFNGADLRNVCTEAGMFAIRAMRD 364
>ZFIN|ZDB-GENE-030131-304 [details] [associations]
symbol:psmc6 "proteasome (prosome, macropain) 26S
subunit, ATPase, 6" species:7955 "Danio rerio" [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0000502 "proteasome complex" evidence=IEA]
[GO:0006508 "proteolysis" evidence=IEA] [GO:0008233 "peptidase
activity" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 ZFIN:ZDB-GENE-030131-304 GO:GO:0005524 GO:GO:0005737
GO:GO:0006508 GO:GO:0030163 GO:GO:0000502 GO:GO:0017111
GO:GO:0008233 KO:K03064 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOVERGEN:HBG000109 CTD:5706 HOGENOM:HOG000225143
GeneTree:ENSGT00550000074826 OMA:NAPFDPE EMBL:BX936454
EMBL:AL954679 EMBL:BC083283 EMBL:BC152260 EMBL:BC155769
EMBL:AY648827 IPI:IPI00507865 RefSeq:NP_001003832.1
UniGene:Dr.32860 STRING:Q6DRD2 Ensembl:ENSDART00000053834
GeneID:321585 KEGG:dre:321585 InParanoid:Q6DRD2 NextBio:20807435
Uniprot:Q6DRD2
Length = 389
Score = 423 (154.0 bits), Expect = 1.1e-38, P = 1.1e-38
Identities = 104/258 (40%), Positives = 149/258 (57%)
Query: 375 SVSFDDIGGLSEYIDALKEMVFFPLLYPDFFASYHITPPRGVLLCGPPGTGKTLIARALA 434
SVS+ +IGGLSE I L+E++ PL P+ F I PP+G LL GPPGTGKTL+ARA+A
Sbjct: 129 SVSYSEIGGLSEQIRELREVIELPLTNPELFQRVGIIPPKGCLLYGPPGTGKTLLARAVA 188
Query: 435 CAASKAGQKVSFYMRKGADVLSKWVGEAERQLKLLFEEAQRNQPSIIFFDEIDGLAPVRS 494
+F + ++ K++GE+ R ++ +F A+ +QP IIF DEID + R
Sbjct: 189 SQLD-----CNFLKVVSSSIVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGGRRF 243
Query: 495 SKQEQIHNSIVSTLLAL---MDGLDSRGQVVLIGATNRVDAIDGALRRPGRFDREFNFPL 551
S+ I TL+ L MDG D+ +V +I ATNR D +D AL RPGR DR+ + L
Sbjct: 244 SEGTSADREIQRTLMELLNQMDGFDTLHRVKMIMATNRPDTLDPALLRPGRLDRKIHIEL 303
Query: 552 PGCEARAEILDIHTRKWKQPPSRELKSELAASCVGYCGADLKALCTEAAIRAFREKYPQV 611
P +AR +IL IH+ + + ++ + S G+ GADL+ +CTEA + A R + V
Sbjct: 304 PNEQARLDILKIHSGPITKHGDIDYEAIVKLSD-GFNGADLRNVCTEAGMFAIRADHEYV 362
Query: 612 YTSDDKFLIDVDSVTVEK 629
T +D F+ V V K
Sbjct: 363 -TQED-FMKAVRKVADSK 378
>UNIPROTKB|H9KYT1 [details] [associations]
symbol:LOC430766 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0017111 InterPro:IPR015415 Pfam:PF09336
PANTHER:PTHR23077:SF18 GeneTree:ENSGT00700000104534
EMBL:AADN02071262 Ensembl:ENSGALT00000000527 OMA:NRRTHAK
Uniprot:H9KYT1
Length = 538
Score = 407 (148.3 bits), Expect = 1.1e-38, Sum P(2) = 1.1e-38
Identities = 87/235 (37%), Positives = 140/235 (59%)
Query: 376 VSFDDIGGLSEYIDALKEMVFFPLLYPDFFASYHITPPRGVLLCGPPGTGKTLIARALAC 435
V+++DIGGL + L+E+V +P+ +PD F + +TP +GVL GPPG GKTL+A+A+A
Sbjct: 206 VTWEDIGGLEDVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIAN 265
Query: 436 AASKAGQKVSFYMRKGADVLSKWVGEAERQLKLLFEEAQRNQPSIIFFDEIDGLAPVRSS 495
+ +F KG ++L+ W GE+E ++ +F++A++ P ++FFDE+D +A R
Sbjct: 266 EC-----QANFISIKGPELLTMWFGESEANVREIFDKARQAAPCVLFFDELDSIAKARGG 320
Query: 496 KQEQ---IHNSIVSTLLALMDGLDSRGQVVLIGATNRVDAIDGALRRPGRFDREFNFPLP 552
+ +++ +L MDG+ ++ V +IGATNR D ID A+ RPGR D+ PLP
Sbjct: 321 NIGDGGGAADRVINQILTEMDGMSTKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPLP 380
Query: 553 GCEARAEILDIHTRKWKQPPSRELKSELAASCV-GYCGADLKALCTEAAIRAFRE 606
++R IL + RK P ++++ + A G+ GADL +C A A RE
Sbjct: 381 DEKSRVAILKANLRK--SPVAKDVDLDFLAKMTNGFSGADLTEICQRACKLAIRE 433
Score = 401 (146.2 bits), Expect = 2.6e-36, P = 2.6e-36
Identities = 114/329 (34%), Positives = 171/329 (51%)
Query: 451 GADVLSKWVGEAERQLKLLFEEAQRNQPSIIFFDEIDGLAPVRSSKQEQIHNSIVSTLLA 510
G +++SK GE+E L+ FEEA++N P+IIF DE+D +AP R ++ IVS LL
Sbjct: 3 GPEIMSKLAGESESNLRKAFEEAEKNAPAIIFIDELDAIAPKREKTHGEVERRIVSQLLT 62
Query: 511 LMDGLDSRGQVVLIGATNRVDAIDGALRRPGRFDREFNFPLPGCEARAEILDIHTRKWKQ 570
LMDGL R V+++ ATNR ++ID ALRR GRFDRE + +P R EIL IHT+ K
Sbjct: 63 LMDGLKQRAHVIVMAATNRPNSIDPALRRFGRFDREVDIGIPDATGRLEILQIHTKNMKL 122
Query: 571 PPSRELKSELAASCVGYCGADLKALCTEAAIRAFREKYPQVYTSDDKFLIDV-DSVTVEK 629
+L+ ++ G+ GADL ALC+EAA++A R+K + D+ +V +S+ V
Sbjct: 123 ADDVDLE-QVGNETHGHVGADLAALCSEAALQAIRKKMDLIDLEDETIDAEVMNSLAVTM 181
Query: 630 YHFIEAMSTITPAAHRGATVHSRPLSLVVAPCLQ---RHLQKAMNYISDIFPPLGMSSEL 686
F A+S P+A R V ++ L+ R LQ+ + Y P+ +
Sbjct: 182 DDFRWALSQSNPSALRETVVEVPQVTWEDIGGLEDVKRELQELVQY------PVEHPDKF 235
Query: 687 TKLCML-SHGSAIPLVYRPRLLLCGSEGTGVDHLGPAILHELEKFPVHSLGLPALLSDPS 745
K M S G +L G G G L AI +E + + G P LL+
Sbjct: 236 LKFGMTPSKG----------VLFYGPPGCGKTLLAKAIANECQANFISIKG-PELLTMWF 284
Query: 746 AKTPEEALVHIFGEARRTTPSILYIPQFN 774
++ E + IF +AR+ P +L+ + +
Sbjct: 285 GES-EANVREIFDKARQAAPCVLFFDELD 312
Score = 42 (19.8 bits), Expect = 1.1e-38, Sum P(2) = 1.1e-38
Identities = 15/49 (30%), Positives = 26/49 (53%)
Query: 341 GHQGDTLAALTSGIQTAGPSSKGGADIQPLQVDESVSFDDIGGLSEYID 389
GH G LAAL S + A + + D+ L+ DE++ + + L+ +D
Sbjct: 137 GHVGADLAALCS--EAALQAIRKKMDLIDLE-DETIDAEVMNSLAVTMD 182
>UNIPROTKB|F1SN45 [details] [associations]
symbol:SPATA5L1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GeneTree:ENSGT00700000104502 GO:GO:0017111 OMA:TWEQIGG
EMBL:CU457441 Ensembl:ENSSSCT00000005157 Uniprot:F1SN45
Length = 755
Score = 437 (158.9 bits), Expect = 1.3e-38, Sum P(2) = 1.3e-38
Identities = 107/269 (39%), Positives = 154/269 (57%)
Query: 381 IGGLSEYIDALKEMVFFPLLYPDFFASYHITPPRGVLLCGPPGTGKTLIARALACAASKA 440
+GGL+E D+L+E++ PLLYP FAS + PRGVLL GPPG GKT + RA+A A
Sbjct: 202 LGGLAEAADSLRELLRLPLLYPRSFASLGLAVPRGVLLAGPPGVGKTQLVRAVAREAGAE 261
Query: 441 GQKVSFYMRKGADVLSKWVGEAERQLKLLFEEAQR---NQPSIIFFDEIDGLAPVRSSKQ 497
VS +GA GE E ++ +F+ AQ +P+++F DE+D L P R
Sbjct: 262 LLAVSAPALQGARP-----GETEENVRRVFQRAQELAGRRPTLLFLDEVDALCPRRGGPH 316
Query: 498 EQIHNSIVSTLLALMDGLDSRGQVVLIGATNRVDAIDGALRRPGRFDREFNFPLPGCEAR 557
+ + +V+ +L L+DG+ +VV++G+TNR DA+D ALRRPGRFDRE P R
Sbjct: 317 QAPESRVVAQVLTLLDGISGDREVVVVGSTNRPDALDPALRRPGRFDREVVIGTPTLGQR 376
Query: 558 AEILDIHTRKWKQPPSRELK-SELAASCVGYCGADLKALCTEAAIRAFREKYPQVYTSDD 616
IL + T K P S ++ S LA VGY GADL ALC EAA+ A +++ +
Sbjct: 377 KAILQVITSK--MPISSQVDLSLLAEMTVGYVGADLTALCREAAMHAL------LHSGKN 428
Query: 617 KFLIDVDSVTVEKYHFIEAMSTITPAAHR 645
+ D+ +++ F+EA I P++ R
Sbjct: 429 Q-----DNPLIDEIDFLEAFKKIQPSSFR 452
Score = 375 (137.1 bits), Expect = 3.9e-31, P = 3.9e-31
Identities = 98/297 (32%), Positives = 161/297 (54%)
Query: 376 VSFDDIGGLSEYIDALKEMVFFPLLYPDFFASYHITPPRGVLLCGPPGTGKTLIARALAC 435
++++ IGGL + LK+ + +PL +P F +T P+GVLL GPPG KT + RALA
Sbjct: 463 ITWEQIGGLEDAKRKLKQSIEWPLKFPREFVRMGLTQPKGVLLYGPPGCAKTTLVRALAT 522
Query: 436 AASKAGQKVSFYMRKGADVLSKWVGEAERQLKLLFEEAQRNQPSIIFFDEIDGLAPVRS- 494
+ SF GAD+ S +VG++E+ L +F++A+ N P+++F DEID + RS
Sbjct: 523 SCH-----CSFVSVSGADLFSPFVGDSEKILSQVFQQARANTPAVVFLDEIDSILGSRSI 577
Query: 495 SKQE-QIHNSIVSTLLALMDG-----LDSRGQ--------------VVLIGATNRVDAID 534
SK + ++S LL +DG ++ RG V+++ ATNR D +D
Sbjct: 578 SKTGCNVQERVLSVLLNELDGVGLKTIERRGSKSDQHEFQEVFNSNVMIVAATNRPDVLD 637
Query: 535 GALRRPGRFDREFNFPLPGCEARAEILDIHTRKWKQPPSRELKSELAASCVGYCGADLKA 594
AL RPGR D+ P P ++R IL + T+ P L++ A +C+ + GADL
Sbjct: 638 DALLRPGRLDKIIYIPPPDEKSRLSILRVCTKNMPVGPDVSLENLAAETCL-FSGADLGN 696
Query: 595 LCTEAAIRAFREKYPQVYTSDDKFLIDVDSVTVEKYHFIEAMSTITPA-AHRGATVH 650
LC EAA+ A +E +++ TV++ HF++++ T+ P+ +H+ ++
Sbjct: 697 LCKEAALLALQEN-------------GLEATTVKQEHFLKSLKTVKPSLSHKDLALY 740
Score = 52 (23.4 bits), Expect = 1.3e-38, Sum P(2) = 1.3e-38
Identities = 34/154 (22%), Positives = 61/154 (39%)
Query: 623 DSVTVEKYHFIEAMSTITPAAHRGAT--VHSRPLSLVVAPCLQRHLQKAMNYISDIFPPL 680
D+ +++ F+EA I P++ R + +P++ L+ +K I PL
Sbjct: 430 DNPLIDEIDFLEAFKKIQPSSFRSVIGLMDVKPITWEQIGGLEDAKRKLKQSIEW---PL 486
Query: 681 GMSSELTKLCMLSHGSAIPLVYRPRLLLCGSEGTGVDHLGPAILHELEKFPVHSLGLPAL 740
E ++ G P +LL G G L A+ V G A
Sbjct: 487 KFPREFVRM-----GLTQP----KGVLLYGPPGCAKTTLVRALATSCHCSFVSVSG--AD 535
Query: 741 LSDPSAKTPEEALVHIFGEARRTTPSILYIPQFN 774
L P E+ L +F +AR TP+++++ + +
Sbjct: 536 LFSPFVGDSEKILSQVFQQARANTPAVVFLDEID 569
>UNIPROTKB|O42586 [details] [associations]
symbol:psmc3-b "26S protease regulatory subunit 6A-B"
species:8355 "Xenopus laevis" [GO:0022624 "proteasome accessory
complex" evidence=ISS] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0030163 GO:GO:0017111 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109
GO:GO:0022624 EMBL:Y10460 UniGene:Xl.113 ProteinModelPortal:O42586
Xenbase:XB-GENE-1009853 Uniprot:O42586
Length = 404
Score = 422 (153.6 bits), Expect = 1.4e-38, P = 1.4e-38
Identities = 99/255 (38%), Positives = 143/255 (56%)
Query: 367 IQPLQVDE--SVSFDDIGGLSEYIDALKEMVFFPLLYPDFFASYHITPPRGVLLCGPPGT 424
++ ++VDE + + DIGGL + I L E + P+ + + F + I PP+GVL+ GPPGT
Sbjct: 137 VKAMEVDERPTEQYSDIGGLDKQIQELVEAIVLPMNHKEKFENLGIQPPKGVLMYGPPGT 196
Query: 425 GKTLIARALACAASKAGQKVSFYMRKGADVLSKWVGEAERQLKLLFEEAQRNQPSIIFFD 484
GKTL+ARA CAA K +F G ++ ++G+ + ++ F A+ PSIIF D
Sbjct: 197 GKTLLARA--CAAQT---KATFLKLAGPQLVQMFIGDGAKLVRDAFSLAKEKAPSIIFID 251
Query: 485 EIDGLAPVRSSKQEQIHNSIVSTLLALM---DGLDSRGQVVLIGATNRVDAIDGALRRPG 541
E+D + R ++ + T+L L+ DG QV +I ATNRVD +D AL R G
Sbjct: 252 ELDAIGNKRFDSEKAGDREVQRTMLELLNQLDGFQPTTQVKVIAATNRVDILDPALLRSG 311
Query: 542 RFDREFNFPLPGCEARAEILDIHTRKWKQPPSRELKSELAASCVGYCGADLKALCTEAAI 601
R DR+ FP+P EARA I+ IH+RK P + ELA + GA KA+C EA I
Sbjct: 312 RLDRKIEFPMPNEEARARIMQIHSRKMNVSPDVNYE-ELARCTDDFNGAQCKAVCVEAGI 370
Query: 602 RAFREKYPQVYTSDD 616
A R ++ T +D
Sbjct: 371 IALRRGATEL-THED 384
>DICTYBASE|DDB_G0284415 [details] [associations]
symbol:psmC3 "26S proteasome ATPase 3 subunit"
species:44689 "Dictyostelium discoideum" [GO:0045335 "phagocytic
vesicle" evidence=IDA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0000502 "proteasome
complex" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 dictyBase:DDB_G0284415 GO:GO:0005524 GO:GO:0005634
GO:GO:0045335 GenomeReviews:CM000153_GR GO:GO:0030163 GO:GO:0000502
HSSP:Q01853 GO:GO:0017111 EMBL:AAFI02000064 eggNOG:COG1222
TIGRFAMs:TIGR01242 KO:K03065 HOGENOM:HOG000225143
RefSeq:XP_638617.1 ProteinModelPortal:Q54PN7 STRING:Q54PN7
PRIDE:Q54PN7 EnsemblProtists:DDB0232967 GeneID:8624588
KEGG:ddi:DDB_G0284415 InParanoid:Q54PN7 OMA:GALMYGP
ProtClustDB:CLSZ2433711 Uniprot:Q54PN7
Length = 421
Score = 420 (152.9 bits), Expect = 2.3e-38, P = 2.3e-38
Identities = 99/255 (38%), Positives = 143/255 (56%)
Query: 367 IQPLQVDESVS--FDDIGGLSEYIDALKEMVFFPLLYPDFFASYHITPPRGVLLCGPPGT 424
++ +++DE + + DIGGL + I L E V P+ + + F S I PP+GVL+ GPPGT
Sbjct: 154 VKAMEIDEKPTEEYSDIGGLDKQIQELVEAVVLPMTHKERFESIGIKPPKGVLMYGPPGT 213
Query: 425 GKTLIARALACAASKAGQKVSFYMR-KGADVLSKWVGEAERQLKLLFEEAQRNQPSIIFF 483
GKTL+ARA CAA Q S Y++ G ++ ++G+ + ++ F A+ P+IIF
Sbjct: 214 GKTLLARA--CAA----QTNSTYLKLAGPQLVQMFIGDGAKLVRDAFALAKEKGPTIIFI 267
Query: 484 DEIDGLAPVRSSKQEQIHNSIVSTLLALM---DGLDSRGQVVLIGATNRVDAIDGALRRP 540
DE+D + R + + T+L L+ DG S + +I ATNR+D +D AL R
Sbjct: 268 DELDAIGTKRFDSEVSGDREVQRTMLELLNQLDGFSSDANIKVIAATNRIDILDPALLRS 327
Query: 541 GRFDREFNFPLPGCEARAEILDIHTRKWKQPPSRELKSELAASCVGYCGADLKALCTEAA 600
GR DR+ FPLP EARA IL IH+RK ELA S + GA LKA+C EA
Sbjct: 328 GRLDRKIEFPLPNEEARAHILQIHSRKMNVSADVNF-DELARSSEDFNGAQLKAVCVEAG 386
Query: 601 IRAFREKYPQVYTSD 615
+ A R ++ +D
Sbjct: 387 MIALRRGGTELIHND 401
>UNIPROTKB|F1NDQ1 [details] [associations]
symbol:PSMC3 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 GeneTree:ENSGT00560000077230 TIGRFAMs:TIGR01242
EMBL:AADN02033470 EMBL:AADN02033469 IPI:IPI00819977
Ensembl:ENSGALT00000013163 Uniprot:F1NDQ1
Length = 385
Score = 420 (152.9 bits), Expect = 2.3e-38, P = 2.3e-38
Identities = 98/255 (38%), Positives = 143/255 (56%)
Query: 367 IQPLQVDE--SVSFDDIGGLSEYIDALKEMVFFPLLYPDFFASYHITPPRGVLLCGPPGT 424
++ ++VDE + + DIGGL + I L E + P+ + + F + I PP+GVL+ GPPGT
Sbjct: 118 VKAMEVDERPTEQYSDIGGLDKQIQELVEAIVLPMNHKEKFENLGIQPPKGVLMYGPPGT 177
Query: 425 GKTLIARALACAASKAGQKVSFYMRKGADVLSKWVGEAERQLKLLFEEAQRNQPSIIFFD 484
GKTL+ARA CAA K +F G ++ ++G+ + ++ F A+ PSIIF D
Sbjct: 178 GKTLLARA--CAAQT---KATFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPSIIFID 232
Query: 485 EIDGLAPVRSSKQEQIHNSIVSTLLALM---DGLDSRGQVVLIGATNRVDAIDGALRRPG 541
E+D + R ++ + T+L L+ DG QV +I ATNRVD +D AL R G
Sbjct: 233 ELDAIGTKRFDSEKAGDREVQRTMLELLNQLDGFQPNTQVKVIAATNRVDILDPALLRSG 292
Query: 542 RFDREFNFPLPGCEARAEILDIHTRKWKQPPSRELKSELAASCVGYCGADLKALCTEAAI 601
R DR+ FP+P EARA I+ IH+RK P + ELA + GA KA+C EA +
Sbjct: 293 RLDRKIEFPMPNEEARARIMQIHSRKMNVSPDVNYE-ELARCTDDFNGAQCKAVCVEAGM 351
Query: 602 RAFREKYPQVYTSDD 616
A R ++ T +D
Sbjct: 352 IALRRGATEL-THED 365
>UNIPROTKB|F1P3L9 [details] [associations]
symbol:PSMC3 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0030163 "protein catabolic process" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0001824 "blastocyst
development" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0022624 "proteasome
accessory complex" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0030163 GO:GO:0017111
GeneTree:ENSGT00560000077230 TIGRFAMs:TIGR01242 OMA:GALMYGP
EMBL:AADN02033470 EMBL:AADN02033469 IPI:IPI00601469
Ensembl:ENSGALT00000038503 Uniprot:F1P3L9
Length = 389
Score = 420 (152.9 bits), Expect = 2.3e-38, P = 2.3e-38
Identities = 98/255 (38%), Positives = 143/255 (56%)
Query: 367 IQPLQVDE--SVSFDDIGGLSEYIDALKEMVFFPLLYPDFFASYHITPPRGVLLCGPPGT 424
++ ++VDE + + DIGGL + I L E + P+ + + F + I PP+GVL+ GPPGT
Sbjct: 122 VKAMEVDERPTEQYSDIGGLDKQIQELVEAIVLPMNHKEKFENLGIQPPKGVLMYGPPGT 181
Query: 425 GKTLIARALACAASKAGQKVSFYMRKGADVLSKWVGEAERQLKLLFEEAQRNQPSIIFFD 484
GKTL+ARA CAA K +F G ++ ++G+ + ++ F A+ PSIIF D
Sbjct: 182 GKTLLARA--CAAQT---KATFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPSIIFID 236
Query: 485 EIDGLAPVRSSKQEQIHNSIVSTLLALM---DGLDSRGQVVLIGATNRVDAIDGALRRPG 541
E+D + R ++ + T+L L+ DG QV +I ATNRVD +D AL R G
Sbjct: 237 ELDAIGTKRFDSEKAGDREVQRTMLELLNQLDGFQPNTQVKVIAATNRVDILDPALLRSG 296
Query: 542 RFDREFNFPLPGCEARAEILDIHTRKWKQPPSRELKSELAASCVGYCGADLKALCTEAAI 601
R DR+ FP+P EARA I+ IH+RK P + ELA + GA KA+C EA +
Sbjct: 297 RLDRKIEFPMPNEEARARIMQIHSRKMNVSPDVNYE-ELARCTDDFNGAQCKAVCVEAGM 355
Query: 602 RAFREKYPQVYTSDD 616
A R ++ T +D
Sbjct: 356 IALRRGATEL-THED 369
>UNIPROTKB|F1PBK7 [details] [associations]
symbol:PSMC3 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0030163 GO:GO:0017111 GeneTree:ENSGT00560000077230
TIGRFAMs:TIGR01242 OMA:GALMYGP EMBL:AAEX03011486
Ensembl:ENSCAFT00000013842 Uniprot:F1PBK7
Length = 439
Score = 420 (152.9 bits), Expect = 2.3e-38, P = 2.3e-38
Identities = 98/255 (38%), Positives = 143/255 (56%)
Query: 367 IQPLQVDE--SVSFDDIGGLSEYIDALKEMVFFPLLYPDFFASYHITPPRGVLLCGPPGT 424
++ ++VDE + + DIGGL + I L E + P+ + + F + I PP+GVL+ GPPGT
Sbjct: 172 VKAMEVDERPTEQYSDIGGLDKQIQELVEAIVLPMNHKEKFENLGIQPPKGVLMYGPPGT 231
Query: 425 GKTLIARALACAASKAGQKVSFYMRKGADVLSKWVGEAERQLKLLFEEAQRNQPSIIFFD 484
GKTL+ARA CAA K +F G ++ ++G+ + ++ F A+ PSIIF D
Sbjct: 232 GKTLLARA--CAAQT---KATFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPSIIFID 286
Query: 485 EIDGLAPVRSSKQEQIHNSIVSTLLALM---DGLDSRGQVVLIGATNRVDAIDGALRRPG 541
E+D + R ++ + T+L L+ DG QV +I ATNRVD +D AL R G
Sbjct: 287 ELDAIGTKRFDSEKAGDREVQRTMLELLNQLDGFQPNTQVKVIAATNRVDILDPALLRSG 346
Query: 542 RFDREFNFPLPGCEARAEILDIHTRKWKQPPSRELKSELAASCVGYCGADLKALCTEAAI 601
R DR+ FP+P EARA I+ IH+RK P + ELA + GA KA+C EA +
Sbjct: 347 RLDRKIEFPMPNEEARARIMQIHSRKMNVSPDVNYE-ELARCTDDFNGAQCKAVCVEAGM 405
Query: 602 RAFREKYPQVYTSDD 616
A R ++ T +D
Sbjct: 406 IALRRGATEL-THED 419
>UNIPROTKB|E9PM69 [details] [associations]
symbol:PSMC3 "26S protease regulatory subunit 6A"
species:9606 "Homo sapiens" [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 EMBL:AC090559 TIGRFAMs:TIGR01242 HGNC:HGNC:9549
ChiTaRS:PSMC3 IPI:IPI00979423 ProteinModelPortal:E9PM69 SMR:E9PM69
PRIDE:E9PM69 Ensembl:ENST00000530912 ArrayExpress:E9PM69
Bgee:E9PM69 Uniprot:E9PM69
Length = 397
Score = 420 (152.9 bits), Expect = 2.3e-38, P = 2.3e-38
Identities = 98/255 (38%), Positives = 143/255 (56%)
Query: 367 IQPLQVDE--SVSFDDIGGLSEYIDALKEMVFFPLLYPDFFASYHITPPRGVLLCGPPGT 424
++ ++VDE + + DIGGL + I L E + P+ + + F + I PP+GVL+ GPPGT
Sbjct: 130 VKAMEVDERPTEQYSDIGGLDKQIQELVEAIVLPMNHKEKFENLGIQPPKGVLMYGPPGT 189
Query: 425 GKTLIARALACAASKAGQKVSFYMRKGADVLSKWVGEAERQLKLLFEEAQRNQPSIIFFD 484
GKTL+ARA CAA K +F G ++ ++G+ + ++ F A+ PSIIF D
Sbjct: 190 GKTLLARA--CAAQT---KATFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPSIIFID 244
Query: 485 EIDGLAPVRSSKQEQIHNSIVSTLLALM---DGLDSRGQVVLIGATNRVDAIDGALRRPG 541
E+D + R ++ + T+L L+ DG QV +I ATNRVD +D AL R G
Sbjct: 245 ELDAIGTKRFDSEKAGDREVQRTMLELLNQLDGFQPNTQVKVIAATNRVDILDPALLRSG 304
Query: 542 RFDREFNFPLPGCEARAEILDIHTRKWKQPPSRELKSELAASCVGYCGADLKALCTEAAI 601
R DR+ FP+P EARA I+ IH+RK P + ELA + GA KA+C EA +
Sbjct: 305 RLDRKIEFPMPNEEARARIMQIHSRKMNVSPDVNYE-ELARCTDDFNGAQCKAVCVEAGM 363
Query: 602 RAFREKYPQVYTSDD 616
A R ++ T +D
Sbjct: 364 IALRRGATEL-THED 377
>UNIPROTKB|P17980 [details] [associations]
symbol:PSMC3 "26S protease regulatory subunit 6A"
species:9606 "Homo sapiens" [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0019048 "virus-host interaction" evidence=IEA] [GO:0001824
"blastocyst development" evidence=IEA] [GO:0048471 "perinuclear
region of cytoplasm" evidence=IEA] [GO:0000932 "cytoplasmic mRNA
processing body" evidence=ISS] [GO:0022624 "proteasome accessory
complex" evidence=ISS] [GO:0003713 "transcription coactivator
activity" evidence=TAS] [GO:0003714 "transcription corepressor
activity" evidence=TAS] [GO:0000502 "proteasome complex"
evidence=TAS] [GO:0000075 "cell cycle checkpoint" evidence=TAS]
[GO:0000082 "G1/S transition of mitotic cell cycle" evidence=TAS]
[GO:0000084 "S phase of mitotic cell cycle" evidence=TAS]
[GO:0000209 "protein polyubiquitination" evidence=TAS] [GO:0000216
"M/G1 transition of mitotic cell cycle" evidence=TAS] [GO:0000278
"mitotic cell cycle" evidence=TAS] [GO:0002474 "antigen processing
and presentation of peptide antigen via MHC class I" evidence=TAS]
[GO:0002479 "antigen processing and presentation of exogenous
peptide antigen via MHC class I, TAP-dependent" evidence=TAS]
[GO:0005654 "nucleoplasm" evidence=TAS] [GO:0005829 "cytosol"
evidence=TAS] [GO:0006521 "regulation of cellular amino acid
metabolic process" evidence=TAS] [GO:0006915 "apoptotic process"
evidence=TAS] [GO:0006977 "DNA damage response, signal transduction
by p53 class mediator resulting in cell cycle arrest" evidence=TAS]
[GO:0010467 "gene expression" evidence=TAS] [GO:0016032 "viral
reproduction" evidence=TAS] [GO:0016070 "RNA metabolic process"
evidence=TAS] [GO:0016071 "mRNA metabolic process" evidence=TAS]
[GO:0031145 "anaphase-promoting complex-dependent proteasomal
ubiquitin-dependent protein catabolic process" evidence=TAS]
[GO:0034641 "cellular nitrogen compound metabolic process"
evidence=TAS] [GO:0042590 "antigen processing and presentation of
exogenous peptide antigen via MHC class I" evidence=TAS]
[GO:0042981 "regulation of apoptotic process" evidence=TAS]
[GO:0044281 "small molecule metabolic process" evidence=TAS]
[GO:0051436 "negative regulation of ubiquitin-protein ligase
activity involved in mitotic cell cycle" evidence=TAS] [GO:0051437
"positive regulation of ubiquitin-protein ligase activity involved
in mitotic cell cycle" evidence=TAS] [GO:0051439 "regulation of
ubiquitin-protein ligase activity involved in mitotic cell cycle"
evidence=TAS] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IDA] Reactome:REACT_13505 Reactome:REACT_578
Reactome:REACT_71 Reactome:REACT_21257 Reactome:REACT_6850
Reactome:REACT_111217 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005829 GO:GO:0005524 Reactome:REACT_111102
Reactome:REACT_116125 Reactome:REACT_6900 GO:GO:0003714
GO:GO:0006915 GO:GO:0010467 GO:GO:0016071 Reactome:REACT_115566
GO:GO:0019048 GO:GO:0005654 GO:GO:0002479 GO:GO:0016032
EMBL:CH471064 Reactome:REACT_21300 GO:GO:0006977 GO:GO:0042981
GO:GO:0044281 GO:GO:0000082 GO:GO:0003713 GO:GO:0051436
GO:GO:0017111 GO:GO:0000932 GO:GO:0000216 GO:GO:0000209
GO:GO:0000084 GO:GO:0031145 GO:GO:0051437 GO:GO:0006521
GO:GO:0001824 Reactome:REACT_383 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOVERGEN:HBG000109 KO:K03065 GO:GO:0022624 OMA:GALMYGP
EMBL:AK313518 EMBL:BC008713 EMBL:BC073165 EMBL:BC106920
EMBL:BC107804 EMBL:AK222485 EMBL:M34079 EMBL:CR456731
IPI:IPI00018398 PIR:A34832 RefSeq:NP_002795.2 UniGene:Hs.250758
ProteinModelPortal:P17980 SMR:P17980 DIP:DIP-27555N IntAct:P17980
MINT:MINT-1149785 STRING:P17980 PhosphoSite:P17980 DMDM:20532406
REPRODUCTION-2DPAGE:IPI00018398 PaxDb:P17980 PeptideAtlas:P17980
PRIDE:P17980 DNASU:5702 Ensembl:ENST00000298852 GeneID:5702
KEGG:hsa:5702 UCSC:uc001nfh.2 CTD:5702 GeneCards:GC11M047440
HGNC:HGNC:9549 HPA:HPA006065 MIM:186852 neXtProt:NX_P17980
PharmGKB:PA33894 InParanoid:P17980 OrthoDB:EOG46143Z
PhylomeDB:P17980 ChiTaRS:PSMC3 GenomeRNAi:5702 NextBio:22154
PMAP-CutDB:P17980 ArrayExpress:P17980 Bgee:P17980 CleanEx:HS_PSMC3
Genevestigator:P17980 GermOnline:ENSG00000165916 Uniprot:P17980
Length = 439
Score = 420 (152.9 bits), Expect = 2.3e-38, P = 2.3e-38
Identities = 98/255 (38%), Positives = 143/255 (56%)
Query: 367 IQPLQVDE--SVSFDDIGGLSEYIDALKEMVFFPLLYPDFFASYHITPPRGVLLCGPPGT 424
++ ++VDE + + DIGGL + I L E + P+ + + F + I PP+GVL+ GPPGT
Sbjct: 172 VKAMEVDERPTEQYSDIGGLDKQIQELVEAIVLPMNHKEKFENLGIQPPKGVLMYGPPGT 231
Query: 425 GKTLIARALACAASKAGQKVSFYMRKGADVLSKWVGEAERQLKLLFEEAQRNQPSIIFFD 484
GKTL+ARA CAA K +F G ++ ++G+ + ++ F A+ PSIIF D
Sbjct: 232 GKTLLARA--CAAQT---KATFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPSIIFID 286
Query: 485 EIDGLAPVRSSKQEQIHNSIVSTLLALM---DGLDSRGQVVLIGATNRVDAIDGALRRPG 541
E+D + R ++ + T+L L+ DG QV +I ATNRVD +D AL R G
Sbjct: 287 ELDAIGTKRFDSEKAGDREVQRTMLELLNQLDGFQPNTQVKVIAATNRVDILDPALLRSG 346
Query: 542 RFDREFNFPLPGCEARAEILDIHTRKWKQPPSRELKSELAASCVGYCGADLKALCTEAAI 601
R DR+ FP+P EARA I+ IH+RK P + ELA + GA KA+C EA +
Sbjct: 347 RLDRKIEFPMPNEEARARIMQIHSRKMNVSPDVNYE-ELARCTDDFNGAQCKAVCVEAGM 405
Query: 602 RAFREKYPQVYTSDD 616
A R ++ T +D
Sbjct: 406 IALRRGATEL-THED 419
>UNIPROTKB|F1SID4 [details] [associations]
symbol:PSMC3 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0022624 "proteasome accessory complex" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0001824 "blastocyst development" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 GeneTree:ENSGT00560000077230 GO:GO:0001824
TIGRFAMs:TIGR01242 OMA:GALMYGP EMBL:CU856312
Ensembl:ENSSSCT00000014459 Uniprot:F1SID4
Length = 446
Score = 420 (152.9 bits), Expect = 2.3e-38, P = 2.3e-38
Identities = 98/255 (38%), Positives = 143/255 (56%)
Query: 367 IQPLQVDE--SVSFDDIGGLSEYIDALKEMVFFPLLYPDFFASYHITPPRGVLLCGPPGT 424
++ ++VDE + + DIGGL + I L E + P+ + + F + I PP+GVL+ GPPGT
Sbjct: 179 VKAMEVDERPTEQYSDIGGLDKQIQELVEAIVLPMNHKEKFENLGIQPPKGVLMYGPPGT 238
Query: 425 GKTLIARALACAASKAGQKVSFYMRKGADVLSKWVGEAERQLKLLFEEAQRNQPSIIFFD 484
GKTL+ARA CAA K +F G ++ ++G+ + ++ F A+ PSIIF D
Sbjct: 239 GKTLLARA--CAAQT---KATFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPSIIFID 293
Query: 485 EIDGLAPVRSSKQEQIHNSIVSTLLALM---DGLDSRGQVVLIGATNRVDAIDGALRRPG 541
E+D + R ++ + T+L L+ DG QV +I ATNRVD +D AL R G
Sbjct: 294 ELDAIGTKRFDSEKAGDREVQRTMLELLNQLDGFQPNTQVKVIAATNRVDILDPALLRSG 353
Query: 542 RFDREFNFPLPGCEARAEILDIHTRKWKQPPSRELKSELAASCVGYCGADLKALCTEAAI 601
R DR+ FP+P EARA I+ IH+RK P + ELA + GA KA+C EA +
Sbjct: 354 RLDRKIEFPMPNEEARARIMQIHSRKMNVSPDVNYE-ELARCTDDFNGAQCKAVCVEAGM 412
Query: 602 RAFREKYPQVYTSDD 616
A R ++ T +D
Sbjct: 413 IALRRGATEL-THED 426
>MGI|MGI:1098754 [details] [associations]
symbol:Psmc3 "proteasome (prosome, macropain) 26S subunit,
ATPase 3" species:10090 "Mus musculus" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0000502 "proteasome complex"
evidence=IEA] [GO:0001824 "blastocyst development" evidence=IMP]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=ISO] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0022624
"proteasome accessory complex" evidence=IDA] [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0048471 "perinuclear region of
cytoplasm" evidence=ISO] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 MGI:MGI:1098754 GO:GO:0005524 GO:GO:0005634
GO:GO:0030163 GO:GO:0017111 GO:GO:0000932
GeneTree:ENSGT00560000077230 GO:GO:0001824 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 KO:K03065 GO:GO:0022624
CTD:5702 ChiTaRS:PSMC3 EMBL:D49686 EMBL:AB040858 EMBL:AY902337
EMBL:AL691439 EMBL:BC005783 IPI:IPI00133206 RefSeq:NP_032974.2
UniGene:Mm.289832 ProteinModelPortal:O88685 SMR:O88685
IntAct:O88685 STRING:O88685 PhosphoSite:O88685 PaxDb:O88685
PRIDE:O88685 Ensembl:ENSMUST00000067663 GeneID:19182 KEGG:mmu:19182
NextBio:295874 Bgee:O88685 Genevestigator:O88685
GermOnline:ENSMUSG00000002102 Uniprot:O88685
Length = 442
Score = 420 (152.9 bits), Expect = 2.3e-38, P = 2.3e-38
Identities = 98/255 (38%), Positives = 143/255 (56%)
Query: 367 IQPLQVDE--SVSFDDIGGLSEYIDALKEMVFFPLLYPDFFASYHITPPRGVLLCGPPGT 424
++ ++VDE + + DIGGL + I L E + P+ + + F + I PP+GVL+ GPPGT
Sbjct: 175 VKAMEVDERPTEQYSDIGGLDKQIQELVEAIVLPMNHKEKFENLGIQPPKGVLMYGPPGT 234
Query: 425 GKTLIARALACAASKAGQKVSFYMRKGADVLSKWVGEAERQLKLLFEEAQRNQPSIIFFD 484
GKTL+ARA CAA K +F G ++ ++G+ + ++ F A+ PSIIF D
Sbjct: 235 GKTLLARA--CAAQT---KATFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPSIIFID 289
Query: 485 EIDGLAPVRSSKQEQIHNSIVSTLLALM---DGLDSRGQVVLIGATNRVDAIDGALRRPG 541
E+D + R ++ + T+L L+ DG QV +I ATNRVD +D AL R G
Sbjct: 290 ELDAIGTKRFDSEKAGDREVQRTMLELLNQLDGFQPNTQVKVIAATNRVDILDPALLRSG 349
Query: 542 RFDREFNFPLPGCEARAEILDIHTRKWKQPPSRELKSELAASCVGYCGADLKALCTEAAI 601
R DR+ FP+P EARA I+ IH+RK P + ELA + GA KA+C EA +
Sbjct: 350 RLDRKIEFPMPNEEARARIMQIHSRKMNVSPDVNYE-ELARCTDDFNGAQCKAVCVEAGM 408
Query: 602 RAFREKYPQVYTSDD 616
A R ++ T +D
Sbjct: 409 IALRRGATEL-THED 422
>RGD|61905 [details] [associations]
symbol:Psmc3 "proteasome (prosome, macropain) 26S subunit, ATPase
3" species:10116 "Rattus norvegicus" [GO:0000932 "cytoplasmic mRNA
processing body" evidence=ISS] [GO:0001824 "blastocyst development"
evidence=IEA;ISO] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA;ISO] [GO:0005737 "cytoplasm" evidence=IEA;ISO;IDA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0022624 "proteasome accessory complex" evidence=IEA;ISO;ISS]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0048471
"perinuclear region of cytoplasm" evidence=IDA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 RGD:61905 GO:GO:0005524
GO:GO:0005634 GO:GO:0048471 GO:GO:0030163 GO:GO:0017111
GO:GO:0000932 eggNOG:COG1222 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109
KO:K03065 GO:GO:0022624 CTD:5702 EMBL:D83522 EMBL:U77918
IPI:IPI00421528 RefSeq:NP_113783.1 UniGene:Rn.11173
ProteinModelPortal:Q63569 IntAct:Q63569 STRING:Q63569
PhosphoSite:Q63569 PRIDE:Q63569 GeneID:29677 KEGG:rno:29677
UCSC:RGD:61905 NextBio:610019 ArrayExpress:Q63569
Genevestigator:Q63569 GermOnline:ENSRNOG00000011414 Uniprot:Q63569
Length = 439
Score = 420 (152.9 bits), Expect = 2.3e-38, P = 2.3e-38
Identities = 98/255 (38%), Positives = 143/255 (56%)
Query: 367 IQPLQVDE--SVSFDDIGGLSEYIDALKEMVFFPLLYPDFFASYHITPPRGVLLCGPPGT 424
++ ++VDE + + DIGGL + I L E + P+ + + F + I PP+GVL+ GPPGT
Sbjct: 172 VKAMEVDERPTEQYSDIGGLDKQIQELVEAIVLPMNHKEKFENLGIQPPKGVLMYGPPGT 231
Query: 425 GKTLIARALACAASKAGQKVSFYMRKGADVLSKWVGEAERQLKLLFEEAQRNQPSIIFFD 484
GKTL+ARA CAA K +F G ++ ++G+ + ++ F A+ PSIIF D
Sbjct: 232 GKTLLARA--CAAQT---KATFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPSIIFID 286
Query: 485 EIDGLAPVRSSKQEQIHNSIVSTLLALM---DGLDSRGQVVLIGATNRVDAIDGALRRPG 541
E+D + R ++ + T+L L+ DG QV +I ATNRVD +D AL R G
Sbjct: 287 ELDAIGTKRFDSEKAGDREVQRTMLELLNQLDGFQPNTQVKVIAATNRVDILDPALLRSG 346
Query: 542 RFDREFNFPLPGCEARAEILDIHTRKWKQPPSRELKSELAASCVGYCGADLKALCTEAAI 601
R DR+ FP+P EARA I+ IH+RK P + ELA + GA KA+C EA +
Sbjct: 347 RLDRKIEFPMPNEEARARIMQIHSRKMNVSPDVNYE-ELARCTDDFNGAQCKAVCVEAGM 405
Query: 602 RAFREKYPQVYTSDD 616
A R ++ T +D
Sbjct: 406 IALRRGATEL-THED 419
>UNIPROTKB|Q6P6U2 [details] [associations]
symbol:Psmc3 "26S protease regulatory subunit 6A"
species:10116 "Rattus norvegicus" [GO:0001824 "blastocyst
development" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0030163 "protein catabolic process" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
RGD:61905 GO:GO:0005524 GO:GO:0005737 GO:GO:0030163 GO:GO:0000502
GO:GO:0017111 GeneTree:ENSGT00560000077230 EMBL:CH473949
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 HOGENOM:HOG000225143
IPI:IPI00421528 UniGene:Rn.11173 EMBL:BC062019 SMR:Q6P6U2
IntAct:Q6P6U2 STRING:Q6P6U2 Ensembl:ENSRNOT00000015757
Genevestigator:Q6P6U2 Uniprot:Q6P6U2
Length = 442
Score = 420 (152.9 bits), Expect = 2.3e-38, P = 2.3e-38
Identities = 98/255 (38%), Positives = 143/255 (56%)
Query: 367 IQPLQVDE--SVSFDDIGGLSEYIDALKEMVFFPLLYPDFFASYHITPPRGVLLCGPPGT 424
++ ++VDE + + DIGGL + I L E + P+ + + F + I PP+GVL+ GPPGT
Sbjct: 175 VKAMEVDERPTEQYSDIGGLDKQIQELVEAIVLPMNHKEKFENLGIQPPKGVLMYGPPGT 234
Query: 425 GKTLIARALACAASKAGQKVSFYMRKGADVLSKWVGEAERQLKLLFEEAQRNQPSIIFFD 484
GKTL+ARA CAA K +F G ++ ++G+ + ++ F A+ PSIIF D
Sbjct: 235 GKTLLARA--CAAQT---KATFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPSIIFID 289
Query: 485 EIDGLAPVRSSKQEQIHNSIVSTLLALM---DGLDSRGQVVLIGATNRVDAIDGALRRPG 541
E+D + R ++ + T+L L+ DG QV +I ATNRVD +D AL R G
Sbjct: 290 ELDAIGTKRFDSEKAGDREVQRTMLELLNQLDGFQPNTQVKVIAATNRVDILDPALLRSG 349
Query: 542 RFDREFNFPLPGCEARAEILDIHTRKWKQPPSRELKSELAASCVGYCGADLKALCTEAAI 601
R DR+ FP+P EARA I+ IH+RK P + ELA + GA KA+C EA +
Sbjct: 350 RLDRKIEFPMPNEEARARIMQIHSRKMNVSPDVNYE-ELARCTDDFNGAQCKAVCVEAGM 408
Query: 602 RAFREKYPQVYTSDD 616
A R ++ T +D
Sbjct: 409 IALRRGATEL-THED 422
>TAIR|locus:2079742 [details] [associations]
symbol:RPT5A "regulatory particle triple-A ATPase 5A"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM;IDA;TAS] [GO:0005737 "cytoplasm"
evidence=IEA;IDA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=IGI;ISS] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=RCA;TAS]
[GO:0005516 "calmodulin binding" evidence=TAS] [GO:0009553 "embryo
sac development" evidence=IGI] [GO:0009555 "pollen development"
evidence=IGI] [GO:0010498 "proteasomal protein catabolic process"
evidence=IGI;RCA] [GO:0000502 "proteasome complex" evidence=IDA]
[GO:0005829 "cytosol" evidence=IDA] [GO:0000741 "karyogamy"
evidence=RCA] [GO:0006094 "gluconeogenesis" evidence=RCA]
[GO:0006635 "fatty acid beta-oxidation" evidence=RCA] [GO:0007010
"cytoskeleton organization" evidence=RCA] [GO:0009407 "toxin
catabolic process" evidence=RCA] [GO:0009560 "embryo sac egg cell
differentiation" evidence=RCA] [GO:0009630 "gravitropism"
evidence=RCA] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=RCA] [GO:0043248 "proteasome assembly"
evidence=RCA] [GO:0051788 "response to misfolded protein"
evidence=RCA] [GO:0080129 "proteasome core complex assembly"
evidence=RCA] [GO:0008540 "proteasome regulatory particle, base
subcomplex" evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005829 GO:GO:0005524 GO:GO:0005634
EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0009555 GO:GO:0000502
GO:GO:0017111 GO:GO:0009553 GO:GO:0010498 EMBL:AC009606
eggNOG:COG1222 TIGRFAMs:TIGR01242 KO:K03065 HOGENOM:HOG000225143
OMA:GALMYGP EMBL:AF081573 EMBL:AF123394 EMBL:AY062705 EMBL:BT000140
IPI:IPI00517001 RefSeq:NP_187204.1 UniGene:At.11513 HSSP:Q9LCZ4
ProteinModelPortal:Q9SEI2 SMR:Q9SEI2 IntAct:Q9SEI2 STRING:Q9SEI2
PaxDb:Q9SEI2 PRIDE:Q9SEI2 EnsemblPlants:AT3G05530.1 GeneID:819718
KEGG:ath:AT3G05530 GeneFarm:2742 TAIR:At3g05530 InParanoid:Q9SEI2
PhylomeDB:Q9SEI2 ProtClustDB:CLSN2679225 Uniprot:Q9SEI2
Length = 424
Score = 420 (152.9 bits), Expect = 2.3e-38, P = 2.3e-38
Identities = 100/264 (37%), Positives = 146/264 (55%)
Query: 367 IQPLQVDESVS--FDDIGGLSEYIDALKEMVFFPLLYPDFFASYHITPPRGVLLCGPPGT 424
++ ++VDE + ++DIGGL + I L E + P+ + + F + PP+GVLL GPPGT
Sbjct: 157 VKAMEVDEKPTEDYNDIGGLEKQIQELVEAIVLPMTHKERFEKLGVRPPKGVLLYGPPGT 216
Query: 425 GKTLIARALACAASKAGQKVSFYMRKGADVLSKWVGEAERQLKLLFEEAQRNQPSIIFFD 484
GKTL+ARA CAA +F G ++ ++G+ + ++ F+ A+ P IIF D
Sbjct: 217 GKTLMARA--CAAQT---NATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKAPCIIFID 271
Query: 485 EIDGLAPVRSSKQEQIHNSIVSTLLALM---DGLDSRGQVVLIGATNRVDAIDGALRRPG 541
EID + R + + T+L L+ DG S ++ +I ATNR D +D AL R G
Sbjct: 272 EIDAIGTKRFDSEVSGDREVQRTMLELLNQLDGFSSDERIKVIAATNRADILDPALMRSG 331
Query: 542 RFDREFNFPLPGCEARAEILDIHTRKWKQPPSRELKSELAASCVGYCGADLKALCTEAAI 601
R DR+ FP P EARA IL IH+RK P + ELA S + GA LKA+C EA +
Sbjct: 332 RLDRKIEFPHPTEEARARILQIHSRKMNVHPDVNFE-ELARSTDDFNGAQLKAVCVEAGM 390
Query: 602 RAFREKYPQVYTSD-DKFLIDVDS 624
A R +V D ++ +I V +
Sbjct: 391 LALRRDATEVNHEDFNEGIIQVQA 414
>TAIR|locus:2159996 [details] [associations]
symbol:RPT4A "regulatory particle triple-A ATPase 4A"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM;TAS] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=IGI;ISS] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=TAS]
[GO:0005618 "cell wall" evidence=IDA] [GO:0000502 "proteasome
complex" evidence=IDA] [GO:0005829 "cytosol" evidence=IDA]
[GO:0043161 "proteasomal ubiquitin-dependent protein catabolic
process" evidence=RCA] [GO:0043248 "proteasome assembly"
evidence=RCA] [GO:0051788 "response to misfolded protein"
evidence=RCA] [GO:0008540 "proteasome regulatory particle, base
subcomplex" evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005829 GO:GO:0005524 GO:GO:0005634
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0005618 GO:GO:0030163
GO:GO:0000502 HSSP:Q01853 GO:GO:0017111 EMBL:AB008264 KO:K03064
eggNOG:COG1222 TIGRFAMs:TIGR01242 HOGENOM:HOG000225143
EMBL:AF123393 EMBL:AF372945 EMBL:AY078040 EMBL:AK220732
IPI:IPI00547512 RefSeq:NP_199115.1 UniGene:At.6532
ProteinModelPortal:Q9SEI3 SMR:Q9SEI3 IntAct:Q9SEI3 STRING:Q9SEI3
PaxDb:Q9SEI3 PRIDE:Q9SEI3 EnsemblPlants:AT5G43010.1 GeneID:834316
KEGG:ath:AT5G43010 GeneFarm:2749 TAIR:At5g43010 InParanoid:Q9SEI3
OMA:NAPFDPE PhylomeDB:Q9SEI3 ProtClustDB:CLSN2679874 Uniprot:Q9SEI3
Length = 399
Score = 420 (152.9 bits), Expect = 2.3e-38, P = 2.3e-38
Identities = 94/244 (38%), Positives = 141/244 (57%)
Query: 375 SVSFDDIGGLSEYIDALKEMVFFPLLYPDFFASYHITPPRGVLLCGPPGTGKTLIARALA 434
++S+ +GGL + I L+E + PL+ P+ F I PP+GVLL GPPGTGKTL+ARA+A
Sbjct: 135 NISYSAVGGLGDQIRELRESIELPLMNPELFLRVGIKPPKGVLLYGPPGTGKTLLARAIA 194
Query: 435 CAASKAGQKVSFYMRKGADVLSKWVGEAERQLKLLFEEAQRNQPSIIFFDEIDGLAPVRS 494
+ +F + ++ K++GE+ R ++ +F A+ +QP IIF DEID + R
Sbjct: 195 -----SNIDANFLKVVSSAIIDKYIGESARLIREMFNYAREHQPCIIFMDEIDAIGGRRF 249
Query: 495 SKQEQIHNSIVSTLLALM---DGLDSRGQVVLIGATNRVDAIDGALRRPGRFDREFNFPL 551
S+ I TL+ L+ DG D+ G+V +I ATNR D +D AL RPGR DR+ PL
Sbjct: 250 SEGTSADREIQRTLMELLNQLDGFDNLGKVKMIMATNRPDVLDPALLRPGRLDRKIEIPL 309
Query: 552 PGCEARAEILDIHTRKWKQPPSRELKSELAASCVGYCGADLKALCTEAAIRAFREKYPQV 611
P ++R +IL IH + + ++ + G+ GADL+ +CTEA + A R + V
Sbjct: 310 PNEQSRMDILKIHAAGIAKHGEIDYEA-IVKLAEGFNGADLRNICTEAGMFAIRAERDYV 368
Query: 612 YTSD 615
D
Sbjct: 369 IHED 372
>TAIR|locus:2103555 [details] [associations]
symbol:CIP111 "Cam interacting protein 111" species:3702
"Arabidopsis thaliana" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0005516 "calmodulin binding" evidence=IDA;TAS] [GO:0009535
"chloroplast thylakoid membrane" evidence=IDA] [GO:0009507
"chloroplast" evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 EMBL:CP002686 GO:GO:0016887 GO:GO:0005516 HSSP:Q01853
eggNOG:COG0464 EMBL:AL390921 GO:GO:0009535 HOGENOM:HOG000223224
EMBL:AF217546 EMBL:AF217547 IPI:IPI00534707 PIR:T50927 PIR:T51257
RefSeq:NP_191228.1 UniGene:At.9830 ProteinModelPortal:Q9LET7
SMR:Q9LET7 IntAct:Q9LET7 STRING:Q9LET7 PRIDE:Q9LET7
EnsemblPlants:AT3G56690.1 GeneID:824836 KEGG:ath:AT3G56690
GeneFarm:2042 TAIR:At3g56690 InParanoid:Q9LET7 OMA:SEAKLNF
PhylomeDB:Q9LET7 ProtClustDB:CLSN2684205 Genevestigator:Q9LET7
Uniprot:Q9LET7
Length = 1022
Score = 455 (165.2 bits), Expect = 2.7e-38, Sum P(2) = 2.7e-38
Identities = 107/240 (44%), Positives = 145/240 (60%)
Query: 370 LQVDESVSFDDIGGLSEYIDALKEMVFFPLLYPDFFASYHITPPRGVLLCGPPGTGKTLI 429
L+V + V+++D+GG +E + L E V +P + D F PP G+L+ GPPG KTL+
Sbjct: 716 LEVPK-VNWEDVGGQNEVKNQLMEAVEWPQKHQDAFKRIGTRPPSGILMFGPPGCSKTLM 774
Query: 430 ARALACAASKAGQKVSFYMRKGADVLSKWVGEAERQLKLLFEEAQRNQPSIIFFDEIDGL 489
ARA+A A K++F KG ++ SKWVGE+E+ ++ LF +A+ N PSIIFFDEID L
Sbjct: 775 ARAVASEA-----KLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDSL 829
Query: 490 APVRSSKQE--QIHNSIVSTLLALMDGLDSRGQVVLIGATNRVDAIDGALRRPGRFDREF 547
A +R + + + + ++S LL +DGL R V +I ATNR D ID AL RPGRFDR
Sbjct: 830 ASIRGKENDGVSVSDRVMSQLLVELDGLHQRVGVTVIAATNRPDKIDSALLRPGRFDRLL 889
Query: 548 NFPLPGCEARAEILDIHTRKWKQPPSREL-KSELAASCVGYCGADLKALCTEAAIRAFRE 606
P R IL IH RK P S ++ ELA+ GY GAD+ +C EAAI A E
Sbjct: 890 YVGPPNETDREAILKIHLRKI--PCSSDICLKELASITKGYTGADISLICREAAIAALEE 947
Score = 413 (150.4 bits), Expect = 7.0e-35, Sum P(2) = 7.0e-35
Identities = 96/259 (37%), Positives = 147/259 (56%)
Query: 362 KGGADIQPLQVDESVS----FDDIGGLSEYIDALKEMVFFPLLYPDFFASYHITPPRGVL 417
+G +Q LQ DE + +GGLS+ L++++ + + +S + P +GVL
Sbjct: 364 QGRTFVQGLQFDEGENVGCEISKLGGLSKEYAILRDIIDSSSI-KNSLSSLGLRPTKGVL 422
Query: 418 LCGPPGTGKTLIARALACAASKAGQKVSFYMRKGADVLSKWVGEAERQLKLLFEEAQRNQ 477
+ GPPGTGKT +AR A +G V+F+ G +++S+++GE+E+ L +F A
Sbjct: 423 IHGPPGTGKTSLARTFA---RHSG--VNFFSVNGPEIISQYLGESEKALDEVFRSASNAT 477
Query: 478 PSIIFFDEIDGLAPVRSSKQEQIHNSIVSTLLALMDGLDSRGQVVLIGATNRVDAIDGAL 537
P+++F D++D +AP R E++ +V+TLL LMDG+ VV+I ATNR D+I+ AL
Sbjct: 478 PAVVFIDDLDAIAPARKEGGEELSQRMVATLLNLMDGISRTDGVVVIAATNRPDSIEPAL 537
Query: 538 RRPGRFDREFNFPLPGCEARAEILDIHTRKWKQPPSRELKSELAASCVGYCGADLKALCT 597
RRPGR DRE +P R++IL I R + S +LA + G+ GADL ALC
Sbjct: 538 RRPGRLDREIEIGVPSSTQRSDILHIILRGMRHSLSNIQVEQLAMATHGFVGADLSALCC 597
Query: 598 EAAIRAFREKYPQVYTSDD 616
EAA R Q +S +
Sbjct: 598 EAAFVCLRRHLDQSSSSSN 616
Score = 50 (22.7 bits), Expect = 7.0e-35, Sum P(2) = 7.0e-35
Identities = 17/69 (24%), Positives = 33/69 (47%)
Query: 706 LLLCGSEGTGVDHLGPAILHELEKFPVHSLGLPALLSDPSAKTPEEALVHIFGEARRTTP 765
+L+ G G + A+ E K ++ P L S ++ E+A+ +F +AR P
Sbjct: 761 ILMFGPPGCSKTLMARAVASEA-KLNFLAVKGPELFSKWVGES-EKAVRSLFAKARANAP 818
Query: 766 SILYIPQFN 774
SI++ + +
Sbjct: 819 SIIFFDEID 827
Score = 38 (18.4 bits), Expect = 2.7e-38, Sum P(2) = 2.7e-38
Identities = 10/39 (25%), Positives = 17/39 (43%)
Query: 70 SNKNSVPLNLRRSTRKRRISVNLEDYTDSSGSEDEDLMR 108
+N NS + R + +SV ED+ ++ MR
Sbjct: 674 NNGNSCSEQMLRKQGEHTLSVGFEDFENAKTKIRPSAMR 712
>TAIR|locus:2028200 [details] [associations]
symbol:AT1G45000 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=ISM]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0016887 "ATPase
activity" evidence=ISS] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0005618
"cell wall" evidence=IDA] [GO:0005886 "plasma membrane"
evidence=IDA] [GO:0016020 "membrane" evidence=IDA] [GO:0000502
"proteasome complex" evidence=IDA] [GO:0005829 "cytosol"
evidence=RCA] [GO:0009506 "plasmodesma" evidence=IDA] [GO:0030244
"cellulose biosynthetic process" evidence=RCA] [GO:0048193 "Golgi
vesicle transport" evidence=RCA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005886 GO:GO:0009506 GO:GO:0005524
GO:GO:0005737 GO:GO:0005618 GO:GO:0005730 GO:GO:0030163
GO:GO:0000502 HSSP:Q01853 GO:GO:0017111 EMBL:AC007915 KO:K03064
eggNOG:COG1222 TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 OMA:EHKEVES
ProtClustDB:CLSN2679874 EMBL:AY062709 EMBL:AY114673 IPI:IPI00531336
RefSeq:NP_175120.1 UniGene:At.27257 ProteinModelPortal:Q9MAK9
SMR:Q9MAK9 IntAct:Q9MAK9 STRING:Q9MAK9 PaxDb:Q9MAK9 PRIDE:Q9MAK9
EnsemblPlants:AT1G45000.1 GeneID:841065 KEGG:ath:AT1G45000
GeneFarm:2760 TAIR:At1g45000 InParanoid:Q9MAK9 PhylomeDB:Q9MAK9
Uniprot:Q9MAK9
Length = 399
Score = 419 (152.6 bits), Expect = 3.0e-38, P = 3.0e-38
Identities = 95/244 (38%), Positives = 140/244 (57%)
Query: 375 SVSFDDIGGLSEYIDALKEMVFFPLLYPDFFASYHITPPRGVLLCGPPGTGKTLIARALA 434
++S+ +GGL + I L+E + PL+ P+ F I PP+GVLL GPPGTGKTL+ARA+A
Sbjct: 135 NISYSAVGGLGDQIRELRESIELPLMNPELFLRVGIKPPKGVLLYGPPGTGKTLLARAIA 194
Query: 435 CAASKAGQKVSFYMRKGADVLSKWVGEAERQLKLLFEEAQRNQPSIIFFDEIDGLAPVRS 494
+ +F + ++ K++GE+ R ++ +F A+ +QP IIF DEID + R
Sbjct: 195 -----SNIDANFLKVVSSAIIDKYIGESARLIREMFNYAREHQPCIIFMDEIDAIGGRRF 249
Query: 495 SKQEQIHNSIVSTLLALM---DGLDSRGQVVLIGATNRVDAIDGALRRPGRFDREFNFPL 551
S+ I TL+ L+ DG D G+V +I ATNR D +D AL RPGR DR+ PL
Sbjct: 250 SEGTSADREIQRTLMELLNQLDGFDQLGKVKMIMATNRPDVLDPALLRPGRLDRKIEIPL 309
Query: 552 PGCEARAEILDIHTRKWKQPPSRELKSELAASCVGYCGADLKALCTEAAIRAFREKYPQV 611
P ++R EIL IH + + ++ + G+ GADL+ +CTEA + A R + V
Sbjct: 310 PNEQSRMEILKIHASGIAKHGEIDYEAIVKLG-EGFNGADLRNICTEAGMFAIRAERDYV 368
Query: 612 YTSD 615
D
Sbjct: 369 IHED 372
>POMBASE|SPAC3A11.12c [details] [associations]
symbol:rpt5 "19S proteasome regulatory subunit Rpt5
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0004175
"endopeptidase activity" evidence=ISO] [GO:0005524 "ATP binding"
evidence=ISM] [GO:0005634 "nucleus" evidence=IEA] [GO:0005829
"cytosol" evidence=IDA] [GO:0006511 "ubiquitin-dependent protein
catabolic process" evidence=ISO] [GO:0007346 "regulation of mitotic
cell cycle" evidence=IC] [GO:0008540 "proteasome regulatory
particle, base subcomplex" evidence=ISO] [GO:0016887 "ATPase
activity" evidence=ISO] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 PomBase:SPAC3A11.12c GO:GO:0005829 GO:GO:0005524
GO:GO:0005634 GO:GO:0007346 EMBL:CU329670 GenomeReviews:CU329670_GR
GO:GO:0016887 GO:GO:0004175 GO:GO:0006511 eggNOG:COG1222
TIGRFAMs:TIGR01242 KO:K03065 HOGENOM:HOG000225143 GO:GO:0008540
OMA:GALMYGP EMBL:AB012136 PIR:T11634 RefSeq:XP_001713083.1
ProteinModelPortal:O14126 STRING:O14126 PRIDE:O14126
EnsemblFungi:SPAC3A11.12c.1 GeneID:3361462 KEGG:spo:SPAC3A11.12c
OrthoDB:EOG40VZZ2 NextBio:20811506 Uniprot:O14126
Length = 438
Score = 402 (146.6 bits), Expect = 3.1e-38, Sum P(2) = 3.1e-38
Identities = 95/245 (38%), Positives = 137/245 (55%)
Query: 367 IQPLQVDESVS--FDDIGGLSEYIDALKEMVFFPLLYPDFFASYHITPPRGVLLCGPPGT 424
++ ++VDE + + DIGGLS+ I+ L E + P+ D F + PP+G L+ GPPGT
Sbjct: 171 VKAMEVDEKPTERYSDIGGLSKQIEELFEAIVLPMQQADKFRKLGVKPPKGCLMFGPPGT 230
Query: 425 GKTLIARALACAASKAGQKVSFYMRKGADVLSKWVGEAERQLKLLFEEAQRNQPSIIFFD 484
GKTL+ARA CAA +F ++ ++G+ + ++ F A+ P+IIF D
Sbjct: 231 GKTLLARA--CAAQS---NATFLKLAAPQLVQMFIGDGAKLVRDAFALAKEKSPAIIFID 285
Query: 485 EIDGLAPVRSSKQEQIHNSIVSTLLALM---DGLDSRGQVVLIGATNRVDAIDGALRRPG 541
E+D + R ++ + T+L L+ DG S +V +I ATNRVD +D AL R G
Sbjct: 286 ELDAIGTKRFDSEKAGDREVQRTMLELLNQLDGFSSDDRVKVIAATNRVDTLDPALLRSG 345
Query: 542 RFDREFNFPLPGCEARAEILDIHTRKWKQPPSRELKSELAASCVGYCGADLKALCTEAAI 601
R DR+ FPLP EAR IL IH+RK + ELA S Y GA LK++C EA +
Sbjct: 346 RLDRKLEFPLPNEEARVGILRIHSRKMAIDDDINWE-ELARSTDEYNGAMLKSVCVEAGM 404
Query: 602 RAFRE 606
A R+
Sbjct: 405 IALRQ 409
Score = 43 (20.2 bits), Expect = 3.1e-38, Sum P(2) = 3.1e-38
Identities = 10/27 (37%), Positives = 16/27 (59%)
Query: 172 EEKVGQDETENGNESDNDADDG-QNEI 197
EE D+++ G S+N+ DG + EI
Sbjct: 5 EELDALDQSQQGGSSNNEGLDGIEQEI 31
>TAIR|locus:2084163 [details] [associations]
symbol:CDC48C "cell division cycle 48C" species:3702
"Arabidopsis thaliana" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005886
"plasma membrane" evidence=ISM] [GO:0009793 "embryo development
ending in seed dormancy" evidence=NAS] [GO:0016887 "ATPase
activity" evidence=ISS] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0000278 "mitotic cell cycle"
evidence=RCA] [GO:0000398 "mRNA splicing, via spliceosome"
evidence=RCA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=RCA] [GO:0006396 "RNA processing"
evidence=RCA] [GO:0009640 "photomorphogenesis" evidence=RCA]
[GO:0010388 "cullin deneddylation" evidence=RCA] [GO:0016567
"protein ubiquitination" evidence=RCA] [GO:0016571 "histone
methylation" evidence=RCA] [GO:0016579 "protein deubiquitination"
evidence=RCA] [GO:0030422 "production of siRNA involved in RNA
interference" evidence=RCA] [GO:0035196 "production of miRNAs
involved in gene silencing by miRNA" evidence=RCA] [GO:0043687
"post-translational protein modification" evidence=RCA] [GO:0045893
"positive regulation of transcription, DNA-dependent" evidence=RCA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005634 EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0051301
GO:GO:0005856 GO:GO:0015031 GO:GO:0007049 eggNOG:COG0464
HOGENOM:HOG000223225 GO:GO:0017111 EMBL:AC009325 GO:GO:0009524
EMBL:AY136443 EMBL:BT002135 IPI:IPI00547846 RefSeq:NP_186810.2
UniGene:At.27731 UniGene:At.63552 ProteinModelPortal:Q9SS94
SMR:Q9SS94 IntAct:Q9SS94 PaxDb:Q9SS94 PRIDE:Q9SS94
EnsemblPlants:AT3G01610.1 GeneID:821105 KEGG:ath:AT3G01610
GeneFarm:1903 TAIR:At3g01610 InParanoid:Q9SS94 KO:K14571
OMA:REGFTTI PhylomeDB:Q9SS94 ProtClustDB:CLSN2720022
Genevestigator:Q9SS94 GermOnline:AT3G01610 Uniprot:Q9SS94
Length = 820
Score = 439 (159.6 bits), Expect = 3.2e-38, Sum P(2) = 3.2e-38
Identities = 103/293 (35%), Positives = 159/293 (54%)
Query: 376 VSFDDIGGLSEYIDALKEMVFFPLLYPDFFASYHITPPRGVLLCGPPGTGKTLIARALAC 435
V +DD+GGL + P+ PD + ++ + G LL GPPG GKTLIA+A
Sbjct: 525 VKWDDVGGLDHLRLQFNRYIVRPIKKPDIYKAFGVDLETGFLLYGPPGCGKTLIAKA--- 581
Query: 436 AASKAGQKVSFYMRKGADVLSKWVGEAERQLKLLFEEAQRNQPSIIFFDEIDGLAPVRSS 495
AA++AG +F KGA++L+K+VGE+E ++ LF+ A+ P +IFFDE+D L R
Sbjct: 582 AANEAG--ANFMHIKGAELLNKYVGESELAIRTLFQRARTCAPCVIFFDEVDALTTSRGK 639
Query: 496 KQEQIHNSIVSTLLALMDGLDSRGQVVLIGATNRVDAIDGALRRPGRFDREFNFPLPGCE 555
+ + +++ L +DG + R V +IGATNR D +D A RPGRF PLP +
Sbjct: 640 EGAWVVERLLNQFLVELDGGERRN-VYVIGATNRPDVVDPAFLRPGRFGNLLYVPLPNAD 698
Query: 556 ARAEILDIHTRKWKQPPSRELKSELAASCVGYCGADLKALCTEAAIRAFREKYPQVYTSD 615
RA IL RK PS +L +C G+ GADL L +A +A E +S+
Sbjct: 699 ERASILKAIARKKPIDPSVDLDGIAKNNCEGFSGADLAHLVQKATFQAVEEMIGSSESSE 758
Query: 616 DKFLIDVDSVTVEKYHFIEAMSTITPAAHRGATVHSRPLSLVVAPCLQRHLQK 668
D + D+ T++ HF +A+S ++P+ ++ H LS + + R+ ++
Sbjct: 759 DD-VTDITQCTIKTRHFEQALSLVSPSVNKQQRRHYDALSTKLQESVGRNTEQ 810
Score = 396 (144.5 bits), Expect = 2.3e-33, Sum P(2) = 2.3e-33
Identities = 94/253 (37%), Positives = 143/253 (56%)
Query: 363 GGADIQPLQVDESVSFDDIGGLSEYIDALKEMVFFPLLYPDFFASYHITPPRGVLLCGPP 422
G D++ ++ + +F D GG+ + +D L+ V FP+L P+ F + PP G+L GPP
Sbjct: 218 GNGDLE-VEGTKGPTFKDFGGIKKILDELEMNVLFPILNPEPFKKIGVKPPSGILFHGPP 276
Query: 423 GTGKTLIARALACAASKAGQKVSFYMRKGADVLSKWVGEAERQLKLLFEEAQRNQPSIIF 482
G GKT +A A+A ++AG V FY +V+S G +E ++ LF +A R PSI+F
Sbjct: 277 GCGKTKLANAIA---NEAG--VPFYKISATEVISGVSGASEENIRELFSKAYRTAPSIVF 331
Query: 483 FDEIDGLAPVRSSKQEQIHNSIVSTLLALMDGLDSRGQ----------VVLIGATNRVDA 532
DEID + R ++Q ++ IV+ LL MDG ++G V++IGATNR DA
Sbjct: 332 IDEIDAIGSKRENQQREMEKRIVTQLLTCMDGPGNKGDKNAPDSSAGFVLVIGATNRPDA 391
Query: 533 IDGALRRPGRFDREFNFPLPGCEARAEILDIHTRKWKQPPSRELKSELAASCVGYCGADL 592
+D ALRR GRF+ E P +ARAEIL + +K + + K +A G+ GADL
Sbjct: 392 LDPALRRSGRFETEIALTAPDEDARAEILSVVAQKLRLEGPFD-KKRIARLTPGFVGADL 450
Query: 593 KALCTEAAIRAFR 605
+++ A +A +
Sbjct: 451 ESVAYLAGRKAIK 463
Score = 49 (22.3 bits), Expect = 3.2e-38, Sum P(2) = 3.2e-38
Identities = 30/109 (27%), Positives = 47/109 (43%)
Query: 78 NLRRSTRKR-RISVNLEDYTDSSGSED----EDLMRPSYRPLRNRMRNN---MSQDELSP 129
N+ RS S + ED D S SED E L P + + + +R+N ++ P
Sbjct: 117 NMERSVSSSPSSSSSSEDSGDVSTSEDAVYGEKLSPPRFDLINDSLRDNYAKLNSSSKKP 176
Query: 130 --SKRKKVVEAKPTPRREGLRPRRSMVATRKQ----LNLDSGDEQGSSE 172
S +K VE + T +G R + + + RK+ L+L G E
Sbjct: 177 IGSPAEKNVEVE-TVSNKG-RSKLATMGARKEAKVSLSLSGATGNGDLE 223
Score = 47 (21.6 bits), Expect = 5.2e-38, Sum P(2) = 5.2e-38
Identities = 18/63 (28%), Positives = 30/63 (47%)
Query: 120 NNMSQDELSPSKRKKVVEAKPTPRREGL-RPRRSMVATRK-QLNLDSGDEQGSSEEKVGQ 177
+N+ +E S S+RKK + + + E L R +S + R + ++ S SS E G
Sbjct: 80 DNIGDEEGSASQRKK--QRRVDEKEEKLQRAEQSHLRKRNMERSVSSSPSSSSSSEDSGD 137
Query: 178 DET 180
T
Sbjct: 138 VST 140
Score = 43 (20.2 bits), Expect = 1.4e-37, Sum P(2) = 1.4e-37
Identities = 18/91 (19%), Positives = 42/91 (46%)
Query: 62 PGKRTVRT---SNKNSVPLNLRRSTRKRRISVNLEDYTDSSGSEDEDLMRPSYRPLRNRM 118
P ++ V SNK L + ++ ++S++L T + E E P+++ +
Sbjct: 180 PAEKNVEVETVSNKGRSKLATMGARKEAKVSLSLSGATGNGDLEVEGTKGPTFKDFGG-I 238
Query: 119 RNNMSQDELSPSKRKKVVEAKPTPRREGLRP 149
+ + DEL + ++ +P ++ G++P
Sbjct: 239 KKIL--DELEMNVLFPILNPEPF-KKIGVKP 266
Score = 38 (18.4 bits), Expect = 4.6e-37, Sum P(2) = 4.6e-37
Identities = 7/21 (33%), Positives = 12/21 (57%)
Query: 165 GDEQGSSEEKVGQDETENGNE 185
GDE+GS+ ++ Q + E
Sbjct: 83 GDEEGSASQRKKQRRVDEKEE 103
>POMBASE|SPCC1682.16 [details] [associations]
symbol:rpt4 "19S proteasome regulatory subunit Rpt4
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0004175
"endopeptidase activity" evidence=ISO] [GO:0005524 "ATP binding"
evidence=ISO] [GO:0005634 "nucleus" evidence=IDA] [GO:0005829
"cytosol" evidence=IDA] [GO:0006511 "ubiquitin-dependent protein
catabolic process" evidence=ISO] [GO:0007346 "regulation of mitotic
cell cycle" evidence=IC] [GO:0008540 "proteasome regulatory
particle, base subcomplex" evidence=ISO] [GO:0016887 "ATPase
activity" evidence=ISM] [GO:0043161 "proteasomal
ubiquitin-dependent protein catabolic process" evidence=NAS]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
PomBase:SPCC1682.16 GO:GO:0005829 GO:GO:0005524 GO:GO:0005634
GO:GO:0007346 GO:GO:0043161 EMBL:CU329672 GenomeReviews:CU329672_GR
GO:GO:0016887 GO:GO:0004175 KO:K03064 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 GO:GO:0008540 PIR:T41073
PIR:T41279 RefSeq:NP_587809.2 ProteinModelPortal:O74445
STRING:O74445 PRIDE:O74445 EnsemblFungi:SPCC1682.16.1
GeneID:2539189 KEGG:spo:SPCC1682.16 OMA:DKERFIV OrthoDB:EOG40KC79
NextBio:20800360 Uniprot:O74445
Length = 388
Score = 417 (151.9 bits), Expect = 4.8e-38, P = 4.8e-38
Identities = 99/243 (40%), Positives = 137/243 (56%)
Query: 376 VSFDDIGGLSEYIDALKEMVFFPLLYPDFFASYHITPPRGVLLCGPPGTGKTLIARALAC 435
+SF +GGL+E I L+E++ PL P+ F I PP+GVLL GPPGTGKTL+ARA+A
Sbjct: 129 ISFAGVGGLNEQIRELREVIELPLKNPELFLRVGIKPPKGVLLYGPPGTGKTLLARAVAA 188
Query: 436 AASKAGQKVSFYMRKGADVLSKWVGEAERQLKLLFEEAQRNQPSIIFFDEIDGLAPVRSS 495
+ V+F + ++ K++GE+ R ++ +F A+ ++P +IF DEID + R S
Sbjct: 189 SLG-----VNFLKVVSSAIVDKYIGESARIIREMFGYAKEHEPCVIFMDEIDAIGGRRFS 243
Query: 496 KQEQIHNSIVSTLLAL---MDGLDSRGQVVLIGATNRVDAIDGALRRPGRFDREFNFPLP 552
+ I TL+ L MDG D GQ +I ATNR D +D AL RPGR DR+ PLP
Sbjct: 244 EGTSADREIQRTLMELLNQMDGFDYLGQTKIIMATNRPDTLDPALLRPGRLDRKIEIPLP 303
Query: 553 GCEARAEILDIHTRKWKQPPSRELKSELAASCVGYCGADLKALCTEAAIRAFREKYPQVY 612
R EIL IH K + + ++ L G GADL+ + TEA A +E V
Sbjct: 304 NEVGRMEILKIHLEKVSKQGEIDYEA-LVKLTDGTNGADLRNVVTEAGFIAIKEDRDYVI 362
Query: 613 TSD 615
SD
Sbjct: 363 QSD 365
>ZFIN|ZDB-GENE-030131-666 [details] [associations]
symbol:psmc3 "proteasome (prosome, macropain) 26S
subunit, ATPase, 3" species:7955 "Danio rerio" [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0000502 "proteasome complex"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 ZFIN:ZDB-GENE-030131-666 GO:GO:0005524 GO:GO:0005737
GO:GO:0030163 GO:GO:0017111 GeneTree:ENSGT00560000077230
TIGRFAMs:TIGR01242 EMBL:BX957297 IPI:IPI00817732 PRIDE:F1QJQ2
Ensembl:ENSDART00000133705 ArrayExpress:F1QJQ2 Bgee:F1QJQ2
Uniprot:F1QJQ2
Length = 427
Score = 417 (151.9 bits), Expect = 4.8e-38, P = 4.8e-38
Identities = 96/244 (39%), Positives = 138/244 (56%)
Query: 367 IQPLQVDE--SVSFDDIGGLSEYIDALKEMVFFPLLYPDFFASYHITPPRGVLLCGPPGT 424
++ ++VDE + + DIGGL + I L E + P+ + + F + I PP+GVL+ GPPGT
Sbjct: 160 VKAMEVDERPTEQYSDIGGLDKQIQELVEAIVLPMNHKEKFENLGIQPPKGVLMYGPPGT 219
Query: 425 GKTLIARALACAASKAGQKVSFYMRKGADVLSKWVGEAERQLKLLFEEAQRNQPSIIFFD 484
GKTL+ARA CAA K +F G ++ ++G+ + ++ F A+ PSIIF D
Sbjct: 220 GKTLLARA--CAAQT---KATFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPSIIFID 274
Query: 485 EIDGLAPVRSSKQEQIHNSIVSTLLALM---DGLDSRGQVVLIGATNRVDAIDGALRRPG 541
E+D + R ++ + T+L L+ DG QV +I ATNRVD +D AL R G
Sbjct: 275 ELDAIGTKRFDSEKAGDREVQRTMLELLNQLDGFQPNMQVKVIAATNRVDILDPALLRSG 334
Query: 542 RFDREFNFPLPGCEARAEILDIHTRKWKQPPSRELKSELAASCVGYCGADLKALCTEAAI 601
R DR+ FP+P EARA I+ IH+RK P + ELA + GA KA+C EA +
Sbjct: 335 RLDRKIEFPMPNEEARARIMQIHSRKMNVCPDVNFE-ELARCTDDFNGAQCKAVCVEAGM 393
Query: 602 RAFR 605
A R
Sbjct: 394 IALR 397
>DICTYBASE|DDB_G0284517 [details] [associations]
symbol:psmC6 "26S protease regulatory subunit S10B"
species:44689 "Dictyostelium discoideum" [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0000502 "proteasome complex" evidence=IEA]
[GO:0044351 "macropinocytosis" evidence=RCA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 dictyBase:DDB_G0284517
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GenomeReviews:CM000153_GR
GO:GO:0030163 GO:GO:0000502 HSSP:Q01853 GO:GO:0017111
EMBL:AAFI02000066 KO:K03064 eggNOG:COG1222 TIGRFAMs:TIGR01242
RefSeq:XP_638541.1 ProteinModelPortal:Q54PJ1 STRING:Q54PJ1
EnsemblProtists:DDB0232968 GeneID:8624634 KEGG:ddi:DDB_G0284517
OMA:HAANITK ProtClustDB:CLSZ2429012 Uniprot:Q54PJ1
Length = 393
Score = 415 (151.1 bits), Expect = 8.0e-38, P = 8.0e-38
Identities = 96/244 (39%), Positives = 140/244 (57%)
Query: 375 SVSFDDIGGLSEYIDALKEMVFFPLLYPDFFASYHITPPRGVLLCGPPGTGKTLIARALA 434
SVS+ +IGGLS I L+E+V PL+ P+ F I P+GVLL GPPGTGKTL+ARA+A
Sbjct: 133 SVSYGEIGGLSNQIRELREVVELPLMIPELFIRVGIKAPKGVLLYGPPGTGKTLLARAIA 192
Query: 435 CAASKAGQKVSFYMRKGADVLSKWVGEAERQLKLLFEEAQRNQPSIIFFDEIDGLAPVRS 494
+ + +F + ++ K++GE+ R ++ +F A+ +QP +IF DEID + R
Sbjct: 193 -----SNLEANFLKVVSSAIVDKYIGESARVIREMFGYARDHQPCVIFMDEIDAIGGRRF 247
Query: 495 SKQEQIHNSIVSTLLAL---MDGLDSRGQVVLIGATNRVDAIDGALRRPGRFDREFNFPL 551
S+ I TL+ L MDG D+ +V +I ATNR D +D AL RPGR DR+ PL
Sbjct: 248 SEGTSADREIQRTLMELLNQMDGFDTLSKVKIIMATNRPDVLDPALLRPGRLDRKIEIPL 307
Query: 552 PGCEARAEILDIHTRKWKQPPSRELKSELAASCVGYCGADLKALCTEAAIRAFREKYPQV 611
P R ++L IH + + ++ +A G+ ADL+ +CTEA + A R + V
Sbjct: 308 PNEAGRVDVLKIHAANITKHGDVDYEA-IAKLADGFNAADLRNVCTEAGMFAIRAERDYV 366
Query: 612 YTSD 615
D
Sbjct: 367 MEED 370
>UNIPROTKB|F1MLV1 [details] [associations]
symbol:PSMC6 "26S protease regulatory subunit 10B"
species:9913 "Bos taurus" [GO:0022624 "proteasome accessory
complex" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0030163
GO:GO:0000502 GO:GO:0017111 TIGRFAMs:TIGR01242 IPI:IPI00707369
UniGene:Bt.22570 GeneTree:ENSGT00550000074826 OMA:EHKEVES
EMBL:DAAA02027846 ProteinModelPortal:F1MLV1 SMR:F1MLV1 PRIDE:F1MLV1
Ensembl:ENSBTAT00000020886 Uniprot:F1MLV1
Length = 389
Score = 415 (151.1 bits), Expect = 8.0e-38, P = 8.0e-38
Identities = 98/244 (40%), Positives = 141/244 (57%)
Query: 375 SVSFDDIGGLSEYIDALKEMVFFPLLYPDFFASYHITPPRGVLLCGPPGTGKTLIARALA 434
+VS+ +IGGLSE I L+E++ PL P+ F I PP+G LL GPPGTGKTL+ARA+A
Sbjct: 129 NVSYSEIGGLSEQIRELREVIELPLTNPELFQRVGIIPPKGCLLYGPPGTGKTLLARAVA 188
Query: 435 CAASKAGQKVSFYMRKGADVLSKWVGEAERQLKLLFEEAQRNQPSIIFFDEIDGLAPVRS 494
+F + ++ K++GE+ R ++ +F A+ +QP IIF DEID + R
Sbjct: 189 SQLD-----CNFLKVVSSSIVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGGRRF 243
Query: 495 SKQEQIHNSIVSTLLAL---MDGLDSRGQVVLIGATNRVDAIDGALRRPGRFDREFNFPL 551
S+ I TL+ L MDG D+ +V +I ATNR D +D AL RPGR DR+ + L
Sbjct: 244 SEGTSADREIQRTLMELLNQMDGFDTLHRVKMIMATNRPDTLDPALLRPGRLDRKIHIDL 303
Query: 552 PGCEARAEILDIHTRKWKQPPSRELKSELAASCVGYCGADLKALCTEAAIRAFREKYPQV 611
P +AR +IL IH + + ++ + S G+ GADL+ +CTEA + A R + V
Sbjct: 304 PNEQARLDILKIHAGPITKHGEIDYEAIVKLSD-GFNGADLRNVCTEAGMFAIRADHDFV 362
Query: 612 YTSD 615
D
Sbjct: 363 VQED 366
>UNIPROTKB|J9P1N0 [details] [associations]
symbol:PSMC6 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 TIGRFAMs:TIGR01242 GeneTree:ENSGT00550000074826
OMA:EHKEVES EMBL:AAEX03016845 Ensembl:ENSCAFT00000019502
Uniprot:J9P1N0
Length = 395
Score = 415 (151.1 bits), Expect = 8.0e-38, P = 8.0e-38
Identities = 98/244 (40%), Positives = 141/244 (57%)
Query: 375 SVSFDDIGGLSEYIDALKEMVFFPLLYPDFFASYHITPPRGVLLCGPPGTGKTLIARALA 434
+VS+ +IGGLSE I L+E++ PL P+ F I PP+G LL GPPGTGKTL+ARA+A
Sbjct: 135 NVSYSEIGGLSEQIRELREVIELPLTNPELFQRVGIIPPKGCLLYGPPGTGKTLLARAVA 194
Query: 435 CAASKAGQKVSFYMRKGADVLSKWVGEAERQLKLLFEEAQRNQPSIIFFDEIDGLAPVRS 494
+F + ++ K++GE+ R ++ +F A+ +QP IIF DEID + R
Sbjct: 195 SQLD-----CNFLKVVSSSIVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGGRRF 249
Query: 495 SKQEQIHNSIVSTLLAL---MDGLDSRGQVVLIGATNRVDAIDGALRRPGRFDREFNFPL 551
S+ I TL+ L MDG D+ +V +I ATNR D +D AL RPGR DR+ + L
Sbjct: 250 SEGTSADREIQRTLMELLNQMDGFDTLHRVKMIMATNRPDTLDPALLRPGRLDRKIHIDL 309
Query: 552 PGCEARAEILDIHTRKWKQPPSRELKSELAASCVGYCGADLKALCTEAAIRAFREKYPQV 611
P +AR +IL IH + + ++ + S G+ GADL+ +CTEA + A R + V
Sbjct: 310 PNEQARLDILKIHAGPITKHGEIDYEAIVKLSD-GFNGADLRNVCTEAGMFAIRADHDFV 368
Query: 612 YTSD 615
D
Sbjct: 369 VQED 372
>UNIPROTKB|P62333 [details] [associations]
symbol:PSMC6 "26S protease regulatory subunit 10B"
species:9606 "Homo sapiens" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0000502 "proteasome complex" evidence=IDA] [GO:0016887 "ATPase
activity" evidence=TAS] [GO:0005634 "nucleus" evidence=IDA]
[GO:0030674 "protein binding, bridging" evidence=NAS] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IC]
[GO:0022624 "proteasome accessory complex" evidence=ISS]
[GO:0000075 "cell cycle checkpoint" evidence=TAS] [GO:0000082 "G1/S
transition of mitotic cell cycle" evidence=TAS] [GO:0000084 "S
phase of mitotic cell cycle" evidence=TAS] [GO:0000209 "protein
polyubiquitination" evidence=TAS] [GO:0000216 "M/G1 transition of
mitotic cell cycle" evidence=TAS] [GO:0000278 "mitotic cell cycle"
evidence=TAS] [GO:0002474 "antigen processing and presentation of
peptide antigen via MHC class I" evidence=TAS] [GO:0002479 "antigen
processing and presentation of exogenous peptide antigen via MHC
class I, TAP-dependent" evidence=TAS] [GO:0005654 "nucleoplasm"
evidence=TAS] [GO:0005829 "cytosol" evidence=TAS] [GO:0006521
"regulation of cellular amino acid metabolic process" evidence=TAS]
[GO:0006915 "apoptotic process" evidence=TAS] [GO:0006977 "DNA
damage response, signal transduction by p53 class mediator
resulting in cell cycle arrest" evidence=TAS] [GO:0010467 "gene
expression" evidence=TAS] [GO:0016032 "viral reproduction"
evidence=TAS] [GO:0016070 "RNA metabolic process" evidence=TAS]
[GO:0016071 "mRNA metabolic process" evidence=TAS] [GO:0031145
"anaphase-promoting complex-dependent proteasomal
ubiquitin-dependent protein catabolic process" evidence=TAS]
[GO:0034641 "cellular nitrogen compound metabolic process"
evidence=TAS] [GO:0042590 "antigen processing and presentation of
exogenous peptide antigen via MHC class I" evidence=TAS]
[GO:0042981 "regulation of apoptotic process" evidence=TAS]
[GO:0044281 "small molecule metabolic process" evidence=TAS]
[GO:0051436 "negative regulation of ubiquitin-protein ligase
activity involved in mitotic cell cycle" evidence=TAS] [GO:0051437
"positive regulation of ubiquitin-protein ligase activity involved
in mitotic cell cycle" evidence=TAS] [GO:0051439 "regulation of
ubiquitin-protein ligase activity involved in mitotic cell cycle"
evidence=TAS] [GO:0005515 "protein binding" evidence=IPI]
[GO:0006200 "ATP catabolic process" evidence=TAS] [GO:0005730
"nucleolus" evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
[GO:0005886 "plasma membrane" evidence=IDA] Reactome:REACT_13505
Reactome:REACT_578 Reactome:REACT_71 Reactome:REACT_21257
Reactome:REACT_6850 Reactome:REACT_111217 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005829
GO:GO:0005886 GO:GO:0005524 Reactome:REACT_111102
Reactome:REACT_116125 Reactome:REACT_6900 GO:GO:0006915
GO:GO:0010467 GO:GO:0016071 Reactome:REACT_115566 GO:GO:0005654
GO:GO:0002479 GO:GO:0016032 Reactome:REACT_21300 GO:GO:0006977
GO:GO:0042981 GO:GO:0000082 GO:GO:0030674 GO:GO:0016887
EMBL:CH471078 GO:GO:0051436 GO:GO:0000216 GO:GO:0000209
GO:GO:0000084 GO:GO:0031145 GO:GO:0051437 GO:GO:0006521
Reactome:REACT_383 KO:K03064 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOVERGEN:HBG000109 GO:GO:0022624 CTD:5706 HOGENOM:HOG000225143
OrthoDB:EOG408N84 EMBL:D78275 EMBL:AF006305 EMBL:BT006843
EMBL:CR456709 EMBL:AK313670 EMBL:BC005390 IPI:IPI00926977
PIR:S71316 RefSeq:NP_002797.3 UniGene:Hs.156171
ProteinModelPortal:P62333 SMR:P62333 DIP:DIP-38150N IntAct:P62333
MINT:MINT-5001174 STRING:P62333 PhosphoSite:P62333 DMDM:51702772
REPRODUCTION-2DPAGE:IPI00021926 PaxDb:P62333 PeptideAtlas:P62333
PRIDE:P62333 DNASU:5706 Ensembl:ENST00000445930 GeneID:5706
KEGG:hsa:5706 UCSC:uc010tqx.2 GeneCards:GC14P053173
H-InvDB:HIX0011661 HGNC:HGNC:9553 HPA:HPA042823 MIM:602708
neXtProt:NX_P62333 PharmGKB:PA33898 InParanoid:P62333
PhylomeDB:P62333 GenomeRNAi:5706 NextBio:22170 Bgee:P62333
CleanEx:HS_PSMC6 Genevestigator:P62333 GermOnline:ENSG00000100519
Uniprot:P62333
Length = 389
Score = 415 (151.1 bits), Expect = 8.0e-38, P = 8.0e-38
Identities = 98/244 (40%), Positives = 141/244 (57%)
Query: 375 SVSFDDIGGLSEYIDALKEMVFFPLLYPDFFASYHITPPRGVLLCGPPGTGKTLIARALA 434
+VS+ +IGGLSE I L+E++ PL P+ F I PP+G LL GPPGTGKTL+ARA+A
Sbjct: 129 NVSYSEIGGLSEQIRELREVIELPLTNPELFQRVGIIPPKGCLLYGPPGTGKTLLARAVA 188
Query: 435 CAASKAGQKVSFYMRKGADVLSKWVGEAERQLKLLFEEAQRNQPSIIFFDEIDGLAPVRS 494
+F + ++ K++GE+ R ++ +F A+ +QP IIF DEID + R
Sbjct: 189 SQLD-----CNFLKVVSSSIVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGGRRF 243
Query: 495 SKQEQIHNSIVSTLLAL---MDGLDSRGQVVLIGATNRVDAIDGALRRPGRFDREFNFPL 551
S+ I TL+ L MDG D+ +V +I ATNR D +D AL RPGR DR+ + L
Sbjct: 244 SEGTSADREIQRTLMELLNQMDGFDTLHRVKMIMATNRPDTLDPALLRPGRLDRKIHIDL 303
Query: 552 PGCEARAEILDIHTRKWKQPPSRELKSELAASCVGYCGADLKALCTEAAIRAFREKYPQV 611
P +AR +IL IH + + ++ + S G+ GADL+ +CTEA + A R + V
Sbjct: 304 PNEQARLDILKIHAGPITKHGEIDYEAIVKLSD-GFNGADLRNVCTEAGMFAIRADHDFV 362
Query: 612 YTSD 615
D
Sbjct: 363 VQED 366
>UNIPROTKB|F1SFE6 [details] [associations]
symbol:PSMC6 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0022624 "proteasome accessory complex" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0030163 GO:GO:0000502 GO:GO:0017111 KO:K03064
TIGRFAMs:TIGR01242 CTD:5706 GeneTree:ENSGT00550000074826
OMA:EHKEVES EMBL:CU407115 RefSeq:XP_001928782.2 UniGene:Ssc.51323
Ensembl:ENSSSCT00000005554 GeneID:100154148 KEGG:ssc:100154148
ArrayExpress:F1SFE6 Uniprot:F1SFE6
Length = 403
Score = 415 (151.1 bits), Expect = 8.0e-38, P = 8.0e-38
Identities = 98/244 (40%), Positives = 141/244 (57%)
Query: 375 SVSFDDIGGLSEYIDALKEMVFFPLLYPDFFASYHITPPRGVLLCGPPGTGKTLIARALA 434
+VS+ +IGGLSE I L+E++ PL P+ F I PP+G LL GPPGTGKTL+ARA+A
Sbjct: 143 NVSYSEIGGLSEQIRELREVIELPLTNPELFQRVGIIPPKGCLLYGPPGTGKTLLARAVA 202
Query: 435 CAASKAGQKVSFYMRKGADVLSKWVGEAERQLKLLFEEAQRNQPSIIFFDEIDGLAPVRS 494
+F + ++ K++GE+ R ++ +F A+ +QP IIF DEID + R
Sbjct: 203 SQLD-----CNFLKVVSSSIVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGGRRF 257
Query: 495 SKQEQIHNSIVSTLLAL---MDGLDSRGQVVLIGATNRVDAIDGALRRPGRFDREFNFPL 551
S+ I TL+ L MDG D+ +V +I ATNR D +D AL RPGR DR+ + L
Sbjct: 258 SEGTSADREIQRTLMELLNQMDGFDTLHRVKMIMATNRPDTLDPALLRPGRLDRKIHIDL 317
Query: 552 PGCEARAEILDIHTRKWKQPPSRELKSELAASCVGYCGADLKALCTEAAIRAFREKYPQV 611
P +AR +IL IH + + ++ + S G+ GADL+ +CTEA + A R + V
Sbjct: 318 PNEQARLDILKIHAGPITKHGEIDYEAIVKLSD-GFNGADLRNVCTEAGMFAIRADHDFV 376
Query: 612 YTSD 615
D
Sbjct: 377 VQED 380
>UNIPROTKB|P62335 [details] [associations]
symbol:PSMC6 "26S protease regulatory subunit 10B"
species:43179 "Spermophilus tridecemlineatus" [GO:0022624
"proteasome accessory complex" evidence=ISS] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0030163 GO:GO:0017111
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 GO:GO:0022624
HOGENOM:HOG000225143 OrthoDB:EOG408N84 GeneTree:ENSGT00550000074826
OMA:EHKEVES EMBL:U36395 PIR:JC5349 ProteinModelPortal:P62335
SMR:P62335 PRIDE:P62335 Ensembl:ENSSTOT00000014492 Uniprot:P62335
Length = 389
Score = 415 (151.1 bits), Expect = 8.0e-38, P = 8.0e-38
Identities = 98/244 (40%), Positives = 141/244 (57%)
Query: 375 SVSFDDIGGLSEYIDALKEMVFFPLLYPDFFASYHITPPRGVLLCGPPGTGKTLIARALA 434
+VS+ +IGGLSE I L+E++ PL P+ F I PP+G LL GPPGTGKTL+ARA+A
Sbjct: 129 NVSYSEIGGLSEQIRELREVIELPLTNPELFQRVGIIPPKGCLLYGPPGTGKTLLARAVA 188
Query: 435 CAASKAGQKVSFYMRKGADVLSKWVGEAERQLKLLFEEAQRNQPSIIFFDEIDGLAPVRS 494
+F + ++ K++GE+ R ++ +F A+ +QP IIF DEID + R
Sbjct: 189 SQLD-----CNFLKVVSSSIVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGGRRF 243
Query: 495 SKQEQIHNSIVSTLLAL---MDGLDSRGQVVLIGATNRVDAIDGALRRPGRFDREFNFPL 551
S+ I TL+ L MDG D+ +V +I ATNR D +D AL RPGR DR+ + L
Sbjct: 244 SEGTSADREIQRTLMELLNQMDGFDTLHRVKMIMATNRPDTLDPALLRPGRLDRKIHIDL 303
Query: 552 PGCEARAEILDIHTRKWKQPPSRELKSELAASCVGYCGADLKALCTEAAIRAFREKYPQV 611
P +AR +IL IH + + ++ + S G+ GADL+ +CTEA + A R + V
Sbjct: 304 PNEQARLDILKIHAGPITKHGEIDYEAIVKLSD-GFNGADLRNVCTEAGMFAIRADHDFV 362
Query: 612 YTSD 615
D
Sbjct: 363 VQED 366
>MGI|MGI:1914339 [details] [associations]
symbol:Psmc6 "proteasome (prosome, macropain) 26S subunit,
ATPase, 6" species:10090 "Mus musculus" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0000502 "proteasome complex"
evidence=ISO] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISO] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0022624
"proteasome accessory complex" evidence=IDA] [GO:0030163 "protein
catabolic process" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 MGI:MGI:1914339
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 KO:K03064 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOVERGEN:HBG000109 GO:GO:0022624 CTD:5706 HOGENOM:HOG000225143
OrthoDB:EOG408N84 OMA:EHKEVES EMBL:AK012174 EMBL:AK014354
EMBL:AK144728 EMBL:AK166961 EMBL:BC043044 EMBL:BC057997
IPI:IPI00125971 RefSeq:NP_080235.2 UniGene:Mm.18472
ProteinModelPortal:P62334 SMR:P62334 IntAct:P62334 STRING:P62334
PhosphoSite:P62334 REPRODUCTION-2DPAGE:IPI00125971
REPRODUCTION-2DPAGE:P62334 PaxDb:P62334 PRIDE:P62334
Ensembl:ENSMUST00000022380 GeneID:67089 KEGG:mmu:67089
InParanoid:P62334 NextBio:323546 Bgee:P62334 Genevestigator:P62334
GermOnline:ENSMUSG00000021832 Uniprot:P62334
Length = 389
Score = 415 (151.1 bits), Expect = 8.0e-38, P = 8.0e-38
Identities = 98/244 (40%), Positives = 141/244 (57%)
Query: 375 SVSFDDIGGLSEYIDALKEMVFFPLLYPDFFASYHITPPRGVLLCGPPGTGKTLIARALA 434
+VS+ +IGGLSE I L+E++ PL P+ F I PP+G LL GPPGTGKTL+ARA+A
Sbjct: 129 NVSYSEIGGLSEQIRELREVIELPLTNPELFQRVGIIPPKGCLLYGPPGTGKTLLARAVA 188
Query: 435 CAASKAGQKVSFYMRKGADVLSKWVGEAERQLKLLFEEAQRNQPSIIFFDEIDGLAPVRS 494
+F + ++ K++GE+ R ++ +F A+ +QP IIF DEID + R
Sbjct: 189 SQLD-----CNFLKVVSSSIVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGGRRF 243
Query: 495 SKQEQIHNSIVSTLLAL---MDGLDSRGQVVLIGATNRVDAIDGALRRPGRFDREFNFPL 551
S+ I TL+ L MDG D+ +V +I ATNR D +D AL RPGR DR+ + L
Sbjct: 244 SEGTSADREIQRTLMELLNQMDGFDTLHRVKMIMATNRPDTLDPALLRPGRLDRKIHIDL 303
Query: 552 PGCEARAEILDIHTRKWKQPPSRELKSELAASCVGYCGADLKALCTEAAIRAFREKYPQV 611
P +AR +IL IH + + ++ + S G+ GADL+ +CTEA + A R + V
Sbjct: 304 PNEQARLDILKIHAGPITKHGEIDYEAIVKLSD-GFNGADLRNVCTEAGMFAIRADHDFV 362
Query: 612 YTSD 615
D
Sbjct: 363 VQED 366
>RGD|1308825 [details] [associations]
symbol:Psmc6 "proteasome (prosome, macropain) 26S subunit,
ATPase, 6" species:10116 "Rattus norvegicus" [GO:0000502
"proteasome complex" evidence=ISO] [GO:0005634 "nucleus"
evidence=ISO] [GO:0005737 "cytoplasm" evidence=ISO] [GO:0005886
"plasma membrane" evidence=ISO] [GO:0022624 "proteasome accessory
complex" evidence=ISO] [GO:0005730 "nucleolus" evidence=ISO]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
RGD:1308825 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0030163
GO:GO:0000502 GO:GO:0017111 KO:K03064 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 CTD:5706 HOGENOM:HOG000225143
OrthoDB:EOG408N84 RefSeq:NP_001093979.1 UniGene:Rn.103233
GeneID:289990 KEGG:rno:289990 NextBio:630545 EMBL:BC107950
IPI:IPI00362105 ProteinModelPortal:Q32PW9 IntAct:Q32PW9
STRING:Q32PW9 PhosphoSite:Q32PW9 PRIDE:Q32PW9 UCSC:RGD:1308825
InParanoid:Q32PW9 ArrayExpress:Q32PW9 Genevestigator:Q32PW9
Uniprot:Q32PW9
Length = 381
Score = 415 (151.1 bits), Expect = 8.0e-38, P = 8.0e-38
Identities = 98/244 (40%), Positives = 141/244 (57%)
Query: 375 SVSFDDIGGLSEYIDALKEMVFFPLLYPDFFASYHITPPRGVLLCGPPGTGKTLIARALA 434
+VS+ +IGGLSE I L+E++ PL P+ F I PP+G LL GPPGTGKTL+ARA+A
Sbjct: 121 NVSYSEIGGLSEQIRELREVIELPLTNPELFQRVGIIPPKGCLLYGPPGTGKTLLARAVA 180
Query: 435 CAASKAGQKVSFYMRKGADVLSKWVGEAERQLKLLFEEAQRNQPSIIFFDEIDGLAPVRS 494
+F + ++ K++GE+ R ++ +F A+ +QP IIF DEID + R
Sbjct: 181 SQLD-----CNFLKVVSSSIVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGGRRF 235
Query: 495 SKQEQIHNSIVSTLLAL---MDGLDSRGQVVLIGATNRVDAIDGALRRPGRFDREFNFPL 551
S+ I TL+ L MDG D+ +V +I ATNR D +D AL RPGR DR+ + L
Sbjct: 236 SEGTSADREIQRTLMELLNQMDGFDTLHRVKMIMATNRPDTLDPALLRPGRLDRKIHIDL 295
Query: 552 PGCEARAEILDIHTRKWKQPPSRELKSELAASCVGYCGADLKALCTEAAIRAFREKYPQV 611
P +AR +IL IH + + ++ + S G+ GADL+ +CTEA + A R + V
Sbjct: 296 PNEQARLDILKIHAGPITKHGEIDYEAIVKLSD-GFNGADLRNVCTEAGMFAIRADHDFV 354
Query: 612 YTSD 615
D
Sbjct: 355 VQED 358
>RGD|2318218 [details] [associations]
symbol:LOC100365869 "proteasome (prosome, macropain) 26S
subunit, ATPase, 6-like" species:10116 "Rattus norvegicus"
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005886
"plasma membrane" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0022624
"proteasome accessory complex" evidence=IEA] [GO:0030163 "protein
catabolic process" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 RGD:2318218
GO:GO:0005524 GO:GO:0005737 GO:GO:0030163 GO:GO:0017111
EMBL:CH474040 KO:K03064 TIGRFAMs:TIGR01242 CTD:5706
GeneTree:ENSGT00550000074826 RefSeq:NP_001093979.1
UniGene:Rn.103233 Ensembl:ENSRNOT00000009649 GeneID:289990
KEGG:rno:289990 NextBio:630545 Uniprot:G3V6W6
Length = 403
Score = 415 (151.1 bits), Expect = 8.0e-38, P = 8.0e-38
Identities = 98/244 (40%), Positives = 141/244 (57%)
Query: 375 SVSFDDIGGLSEYIDALKEMVFFPLLYPDFFASYHITPPRGVLLCGPPGTGKTLIARALA 434
+VS+ +IGGLSE I L+E++ PL P+ F I PP+G LL GPPGTGKTL+ARA+A
Sbjct: 143 NVSYSEIGGLSEQIRELREVIELPLTNPELFQRVGIIPPKGCLLYGPPGTGKTLLARAVA 202
Query: 435 CAASKAGQKVSFYMRKGADVLSKWVGEAERQLKLLFEEAQRNQPSIIFFDEIDGLAPVRS 494
+F + ++ K++GE+ R ++ +F A+ +QP IIF DEID + R
Sbjct: 203 SQLD-----CNFLKVVSSSIVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGGRRF 257
Query: 495 SKQEQIHNSIVSTLLAL---MDGLDSRGQVVLIGATNRVDAIDGALRRPGRFDREFNFPL 551
S+ I TL+ L MDG D+ +V +I ATNR D +D AL RPGR DR+ + L
Sbjct: 258 SEGTSADREIQRTLMELLNQMDGFDTLHRVKMIMATNRPDTLDPALLRPGRLDRKIHIDL 317
Query: 552 PGCEARAEILDIHTRKWKQPPSRELKSELAASCVGYCGADLKALCTEAAIRAFREKYPQV 611
P +AR +IL IH + + ++ + S G+ GADL+ +CTEA + A R + V
Sbjct: 318 PNEQARLDILKIHAGPITKHGEIDYEAIVKLSD-GFNGADLRNVCTEAGMFAIRADHDFV 376
Query: 612 YTSD 615
D
Sbjct: 377 VQED 380
>UNIPROTKB|E7ERY0 [details] [associations]
symbol:NVL "Nuclear valosin-containing protein-like"
species:9606 "Homo sapiens" [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0017111 EMBL:AC092809 HGNC:HGNC:8070 ChiTaRS:NVL
IPI:IPI00946072 ProteinModelPortal:E7ERY0 SMR:E7ERY0
Ensembl:ENST00000482491 ArrayExpress:E7ERY0 Bgee:E7ERY0
Uniprot:E7ERY0
Length = 580
Score = 422 (153.6 bits), Expect = 9.8e-38, P = 9.8e-38
Identities = 101/269 (37%), Positives = 154/269 (57%)
Query: 375 SVSFDDIGGLSEYIDALKEMVFFPLLYPDFFASYHITPPRGVLLCGPPGTGKTLIARALA 434
+V++ DIG L + + L + P+ PD F + + P GVLL GPPG GKTL+A+A+A
Sbjct: 301 NVTWADIGALEDIREELTMAILAPVRNPDQFKALGLVTPAGVLLAGPPGCGKTLLAKAVA 360
Query: 435 CAASKAGQKVSFYMRKGADVLSKWVGEAERQLKLLFEEAQRNQPSIIFFDEIDGLAPVRS 494
+++G ++F KG ++L+ +VGE+ER ++ +F+ A+ + P +IFFDE+D L P RS
Sbjct: 361 ---NESG--LNFISVKGPELLNMYVGESERAVRQVFQRAKNSAPCVIFFDEVDALCPRRS 415
Query: 495 SKQEQIHNSIVSTLLALMDGLDSRGQVVLIGATNRVDAIDGALRRPGRFDREFNFPLPGC 554
++ +V+ LL MDGL++R QV ++ ATNR D ID A+ RPGR D+ LP
Sbjct: 416 DRETGASVRVVNQLLTEMDGLEARQQVFIMAATNRPDIIDPAILRPGRLDKTLFVGLPPP 475
Query: 555 EARAEILDIHTRKWKQPP-SRELKSELAAS---CVGYCGADLKALCTEAAIRAFREKYPQ 610
R IL T+ +PP ++ E A C Y GADL AL EA+I A R++ +
Sbjct: 476 ADRLAILKTITKNGTKPPLDADVNLEAIAGDLRCDCYTGADLSALVREASICALRQEMAR 535
Query: 611 VYTSDDKFLIDVDSVTVEKYHFIEAMSTI 639
+ ++K + V HF EA +
Sbjct: 536 QKSGNEK-----GELKVSHKHFEEAFKKV 559
Score = 283 (104.7 bits), Expect = 1.7e-22, Sum P(2) = 1.7e-22
Identities = 67/154 (43%), Positives = 93/154 (60%)
Query: 453 DVLSKWVGEAERQLKLLFEEAQRNQPSIIFFDEIDGLAPVRSSKQEQIHNSIVSTLLALM 512
+++S GE+E++L+ LFE+A N P IIF DEID + P R + + IV+ LL M
Sbjct: 57 EIVSGVSGESEQKLRELFEQAVSNAPCIIFIDEIDAITPKREVASKDMERRIVAQLLTCM 116
Query: 513 DGLDS---RGQVVLIGATNRVDAIDGALRRPGRFDREFNFPLPGCEARAEILDIHTRKWK 569
D L++ +V++IGATNR D++D ALRR GRFDRE +P +R IL RK +
Sbjct: 117 DDLNNVAATARVLVIGATNRPDSLDPALRRAGRFDREICLGIPDEASRERILQTLCRKLR 176
Query: 570 QPPSRELKSELAASCVGYCGADLKALCTEAAIRA 603
P + + LA G+ GADL ALC EAA+ A
Sbjct: 177 LPQAFDF-CHLAHLTPGFVGADLMALCREAAMCA 209
Score = 58 (25.5 bits), Expect = 1.7e-22, Sum P(2) = 1.7e-22
Identities = 35/151 (23%), Positives = 63/151 (41%)
Query: 622 VDSVTVEKYHFIEAMSTITPAAHRGATVHSRPLSLVVAPCLQRHLQKAMNYISDIFPPLG 681
+ + +E FI A+S++ P+A R V P + + + DI L
Sbjct: 270 MQGLCIELNDFIVALSSVQPSAKREG--------FVTVPNVT---WADIGALEDIREELT 318
Query: 682 MSSELTKLCMLSHGSAIPLVYRPRLLLCGSEGTGVDHLGPAILHELEKFPVHSLGLPALL 741
M+ L + A+ LV +LL G G G L A+ +E + G P LL
Sbjct: 319 MAI-LAPVRNPDQFKALGLVTPAGVLLAGPPGCGKTLLAKAVANESGLNFISVKG-PELL 376
Query: 742 SDPSAKTPEEALVHIFGEARRTTPSILYIPQ 772
+ ++ E A+ +F A+ + P +++ +
Sbjct: 377 NMYVGES-ERAVRQVFQRAKNSAPCVIFFDE 406
>UNIPROTKB|F1NCS8 [details] [associations]
symbol:PSMC6 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0030163 "protein catabolic process" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005886
"plasma membrane" evidence=IEA] [GO:0022624 "proteasome accessory
complex" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0030163 GO:GO:0000502 GO:GO:0017111 TIGRFAMs:TIGR01242
GeneTree:ENSGT00550000074826 OMA:EHKEVES EMBL:AADN02004069
IPI:IPI00570965 Ensembl:ENSGALT00000020277 ArrayExpress:F1NCS8
Uniprot:F1NCS8
Length = 403
Score = 414 (150.8 bits), Expect = 1.0e-37, P = 1.0e-37
Identities = 98/243 (40%), Positives = 140/243 (57%)
Query: 376 VSFDDIGGLSEYIDALKEMVFFPLLYPDFFASYHITPPRGVLLCGPPGTGKTLIARALAC 435
VS+ +IGGLSE I L+E++ PL P+ F I PP+G LL GPPGTGKTL+ARA+A
Sbjct: 144 VSYSEIGGLSEQIRELREVIELPLTNPELFQRVGIIPPKGCLLYGPPGTGKTLLARAVAS 203
Query: 436 AASKAGQKVSFYMRKGADVLSKWVGEAERQLKLLFEEAQRNQPSIIFFDEIDGLAPVRSS 495
+F + ++ K++GE+ R ++ +F A+ +QP IIF DEID + R S
Sbjct: 204 QLD-----CNFLKVVSSSIVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGGRRFS 258
Query: 496 KQEQIHNSIVSTLLAL---MDGLDSRGQVVLIGATNRVDAIDGALRRPGRFDREFNFPLP 552
+ I TL+ L MDG D+ +V +I ATNR D +D AL RPGR DR+ + LP
Sbjct: 259 EGTSADREIQRTLMELLNQMDGFDTLHRVKMIMATNRPDTLDPALLRPGRLDRKIHIDLP 318
Query: 553 GCEARAEILDIHTRKWKQPPSRELKSELAASCVGYCGADLKALCTEAAIRAFREKYPQVY 612
+AR +IL IH + + ++ + S G+ GADL+ +CTEA + A R + V
Sbjct: 319 NEQARLDILKIHAGPITKHGEIDYEAIVKLSD-GFNGADLRNVCTEAGMFAIRADHDFVV 377
Query: 613 TSD 615
D
Sbjct: 378 QED 380
>UNIPROTKB|Q5ZKX2 [details] [associations]
symbol:PSMC6 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0030163 "protein catabolic process" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005886
"plasma membrane" evidence=IEA] [GO:0022624 "proteasome accessory
complex" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0030163 GO:GO:0000502 GO:GO:0017111 KO:K03064 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 CTD:5706 HOGENOM:HOG000225143
OrthoDB:EOG408N84 GeneTree:ENSGT00550000074826 EMBL:AADN02004069
EMBL:AJ719962 IPI:IPI00820938 RefSeq:NP_001006494.1
UniGene:Gga.16005 STRING:Q5ZKX2 Ensembl:ENSGALT00000037197
GeneID:423586 KEGG:gga:423586 InParanoid:Q5ZKX2 NextBio:20826039
Uniprot:Q5ZKX2
Length = 389
Score = 414 (150.8 bits), Expect = 1.0e-37, P = 1.0e-37
Identities = 98/243 (40%), Positives = 140/243 (57%)
Query: 376 VSFDDIGGLSEYIDALKEMVFFPLLYPDFFASYHITPPRGVLLCGPPGTGKTLIARALAC 435
VS+ +IGGLSE I L+E++ PL P+ F I PP+G LL GPPGTGKTL+ARA+A
Sbjct: 130 VSYSEIGGLSEQIRELREVIELPLTNPELFQRVGIIPPKGCLLYGPPGTGKTLLARAVAS 189
Query: 436 AASKAGQKVSFYMRKGADVLSKWVGEAERQLKLLFEEAQRNQPSIIFFDEIDGLAPVRSS 495
+F + ++ K++GE+ R ++ +F A+ +QP IIF DEID + R S
Sbjct: 190 QLD-----CNFLKVVSSSIVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGGRRFS 244
Query: 496 KQEQIHNSIVSTLLAL---MDGLDSRGQVVLIGATNRVDAIDGALRRPGRFDREFNFPLP 552
+ I TL+ L MDG D+ +V +I ATNR D +D AL RPGR DR+ + LP
Sbjct: 245 EGTSADREIQRTLMELLNQMDGFDTLHRVKMIMATNRPDTLDPALLRPGRLDRKIHIDLP 304
Query: 553 GCEARAEILDIHTRKWKQPPSRELKSELAASCVGYCGADLKALCTEAAIRAFREKYPQVY 612
+AR +IL IH + + ++ + S G+ GADL+ +CTEA + A R + V
Sbjct: 305 NEQARLDILKIHAGPITKHGEIDYEAIVKLSD-GFNGADLRNVCTEAGMFAIRADHDFVV 363
Query: 613 TSD 615
D
Sbjct: 364 QED 366
>ZFIN|ZDB-GENE-060929-204 [details] [associations]
symbol:spata5l1 "spermatogenesis associated 5-like
1" species:7955 "Danio rerio" [GO:0005524 "ATP binding"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0005575 "cellular_component" evidence=ND] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 ZFIN:ZDB-GENE-060929-204 GO:GO:0005524
GeneTree:ENSGT00700000104502 GO:GO:0017111 CTD:79029 EMBL:CU929075
EMBL:CU595864 IPI:IPI00804177 RefSeq:NP_001070056.2
UniGene:Dr.80583 Ensembl:ENSDART00000101660
Ensembl:ENSDART00000129459 GeneID:767648 KEGG:dre:767648
NextBio:20918042 Uniprot:F1Q8W3
Length = 748
Score = 422 (153.6 bits), Expect = 1.2e-37, Sum P(3) = 1.2e-37
Identities = 114/313 (36%), Positives = 162/313 (51%)
Query: 350 LTSGIQTAGP-SSKGGADIQPLQV-------DESVSFDDIGGLSEYIDALKEMVFFPLLY 401
+ SG Q AG +++ DI +Q + VS +GG+ + +LKEM+ FPL Y
Sbjct: 150 VNSGSQRAGLITARTCVDISTIQTVKHLDRQQQQVSAAPLGGMEDVFASLKEMITFPLRY 209
Query: 402 PDFFASYHITPPRGVLLCGPPGTGKTLIARALACAASKAGQKVSFYMRKGADVLSKWVGE 461
P ++ PRG+LL GPPG GKTL+ R C A G + G +V GE
Sbjct: 210 PGSLRQLGLSCPRGLLLIGPPGVGKTLLVR---CVAKDIG--ATLVTVNGPEVTGSRPGE 264
Query: 462 AERQLKLLFEEAQR---NQPSIIFFDEIDGLAPVRSSKQEQIHNSIVSTLLALMDGLDSR 518
+E L+ +FE+A+ + P ++ DEID L P R+ N +V+ LL LMD + S
Sbjct: 265 SEENLRRVFEQARDAADDGPCVLLIDEIDSLCPRRTGSSSAPENRLVAQLLTLMDAIGSH 324
Query: 519 GQVVLIGATNRVDAIDGALRRPGRFDREFNFPLPGCEARAEILDIHTRKWKQPPSRELKS 578
V+IGATN+ D++D ALRRPGRFDRE +P R IL R+ P +L +
Sbjct: 325 EGFVIIGATNQPDSLDPALRRPGRFDREVIIGVPSLLQRRSILKCVCREMPLSPDVDLNT 384
Query: 579 ELAASCVGYCGADLKALCTEAAIRAFREKYPQVYTSDDKFLIDVDSVTVEKYHFIEAMST 638
+C GY GADL AL EAA++A R + Q+ S+ V HF++A+
Sbjct: 385 LAEMTC-GYVGADLSALSREAALQAMR--HSQMGASEP----------VSMQHFMQALRH 431
Query: 639 ITPAAHR---GAT 648
+ P+ R GAT
Sbjct: 432 VQPSCLRSSIGAT 444
Score = 249 (92.7 bits), Expect = 3.6e-28, Sum P(2) = 3.6e-28
Identities = 58/162 (35%), Positives = 92/162 (56%)
Query: 360 SSKGGADIQPLQVDESVSFDDIGGLSEYIDALKEMVFFPLLYPDFFASYHITPPRGVLLC 419
SS G D +P + ++ IGGL + LK+ + +P+ +P+ F ++ PRGVLL
Sbjct: 439 SSIGATDFKP------IGWEQIGGLEDVKLKLKQSIEWPMRFPEAFVRLGVSRPRGVLLY 492
Query: 420 GPPGTGKTLIARALACAASKAGQKVSFYMRKGADVLSKWVGEAERQLKLLFEEAQRNQPS 479
GPPG KT + +A AAS + SF+ GA++ S +VG++E+ L LF +A+ PS
Sbjct: 493 GPPGCAKTTLVKA---AASSS--HCSFFSLSGAELFSPYVGDSEKTLAQLFAQARACAPS 547
Query: 480 IIFFDEIDGLAPVR---SSKQEQIHNSIVSTLLALMDGLDSR 518
I+F DE+D + R SS + + ++S LL +DG+ R
Sbjct: 548 IVFLDEVDSMVGSREDGSSSSHSVQSQVLSVLLTELDGVGVR 589
Score = 153 (58.9 bits), Expect = 3.6e-28, Sum P(2) = 3.6e-28
Identities = 38/87 (43%), Positives = 53/87 (60%)
Query: 521 VVLIGATNRVDAIDGALRRPGRFDREFNFPLPGCEARAEILDIHTRKWKQPPSRELKSE- 579
V+++ ATNR +A+D AL RPGR D+ P P +AR +L I T+ P +++ E
Sbjct: 626 VLIVAATNRPEALDSALLRPGRLDQIIYVPPPDLQARLAVLRICTKS--VPLHQDVCLED 683
Query: 580 LAASCVGYCGADLKALCTEAAIRAFRE 606
LAA + GADL+ LC EAA+ A RE
Sbjct: 684 LAAQTELFSGADLENLCKEAALLALRE 710
Score = 58 (25.5 bits), Expect = 1.2e-37, Sum P(3) = 1.2e-37
Identities = 23/73 (31%), Positives = 31/73 (42%)
Query: 701 VYRPR-LLLCGSEGTGVDHLGPAILHELEKFPVHSLGLPALLSDPSAKTPEEALVHIFGE 759
V RPR +LL G G L A SL L S P E+ L +F +
Sbjct: 483 VSRPRGVLLYGPPGCAKTTLVKAAASS-SHCSFFSLSGAELFS-PYVGDSEKTLAQLFAQ 540
Query: 760 ARRTTPSILYIPQ 772
AR PSI+++ +
Sbjct: 541 ARACAPSIVFLDE 553
Score = 42 (19.8 bits), Expect = 1.2e-37, Sum P(3) = 1.2e-37
Identities = 15/48 (31%), Positives = 24/48 (50%)
Query: 864 SVSLPELPKVP--TVESGPKASELKAKVEAEQHALRRLRMCLRDVCNR 909
SV L EL V T+E ++ +Q +R +M L++VCN+
Sbjct: 577 SVLLTELDGVGVRTLERRSTCRKIALLEGGDQEDVRLHQMELQEVCNK 624
>UNIPROTKB|J9NWA6 [details] [associations]
symbol:LOC100687152 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 GeneTree:ENSGT00560000077230 TIGRFAMs:TIGR01242
EMBL:AAEX03026457 Ensembl:ENSCAFT00000026372 OMA:REAVEQP
Uniprot:J9NWA6
Length = 434
Score = 413 (150.4 bits), Expect = 1.3e-37, P = 1.3e-37
Identities = 97/255 (38%), Positives = 142/255 (55%)
Query: 367 IQPLQVDE--SVSFDDIGGLSEYIDALKEMVFFPLLYPDFFASYHITPPRGVLLCGPPGT 424
++ ++VDE + + DIGGL + I L E + P+ + + F + I PP+GVL+ GPPGT
Sbjct: 167 VKAMEVDERPTEQYSDIGGLDKQIQELVEAIVLPMNHKEKFENLGIQPPKGVLMYGPPGT 226
Query: 425 GKTLIARALACAASKAGQKVSFYMRKGADVLSKWVGEAERQLKLLFEEAQRNQPSIIFFD 484
GKTL+ARA CAA K +F G ++ ++G+ + ++ F A+ PSIIF D
Sbjct: 227 GKTLLARA--CAAQT---KATFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPSIIFID 281
Query: 485 EIDGLAPVRSSKQEQIHNSIVSTLLALM---DGLDSRGQVVLIGATNRVDAIDGALRRPG 541
E+D R ++ + T+L L+ DG QV +I ATNRVD +D AL R G
Sbjct: 282 ELDATGTKRFDSEKAGDREVQRTMLELLNQLDGFQPNTQVKVIAATNRVDILDPALLRSG 341
Query: 542 RFDREFNFPLPGCEARAEILDIHTRKWKQPPSRELKSELAASCVGYCGADLKALCTEAAI 601
R D++ FP+P EARA I+ IH+RK P + ELA + GA KA+C EA +
Sbjct: 342 RLDQKIEFPMPNEEARARIMQIHSRKMNVSPDVNYE-ELARCMDDFNGAQCKAVCVEAGM 400
Query: 602 RAFREKYPQVYTSDD 616
A R ++ T +D
Sbjct: 401 IALRRGTTEL-THED 414
>UNIPROTKB|E1BT72 [details] [associations]
symbol:NVL "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005730
"nucleolus" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0016235 "aggresome" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 GO:GO:0005730
GO:GO:0016235 GO:GO:0017111 OMA:NDMTLKE
GeneTree:ENSGT00570000079239 EMBL:AADN02012163 IPI:IPI00584236
Ensembl:ENSGALT00000015173 ArrayExpress:E1BT72 Uniprot:E1BT72
Length = 858
Score = 434 (157.8 bits), Expect = 1.9e-37, P = 1.9e-37
Identities = 103/268 (38%), Positives = 156/268 (58%)
Query: 376 VSFDDIGGLSEYIDALKEMVFFPLLYPDFFASYHITPPRGVLLCGPPGTGKTLIARALAC 435
V++ DIG L + + L + P+ P+ F + +T P GVLL GPPG GKTL+A+A+A
Sbjct: 578 VTWADIGALEDVREELTMAILAPVRNPEQFKALGLTTPAGVLLAGPPGCGKTLLAKAVA- 636
Query: 436 AASKAGQKVSFYMRKGADVLSKWVGEAERQLKLLFEEAQRNQPSIIFFDEIDGLAPVRSS 495
+++G ++F KG ++L+ +VGE+ER ++ +F+ A+ + P +IFFDE+D L P RS
Sbjct: 637 --NESG--LNFISVKGPELLNMYVGESERAVRQVFQRARNSAPCVIFFDEVDALCPRRSD 692
Query: 496 KQEQIHNSIVSTLLALMDGLDSRGQVVLIGATNRVDAIDGALRRPGRFDREFNFPLPGCE 555
++ +V+ LL MDGL++R QV ++ ATNR D ID A+ RPGR D+ LP E
Sbjct: 693 RESGASVRVVNQLLTEMDGLENRQQVFIMAATNRPDIIDPAILRPGRLDKTLYVGLPPPE 752
Query: 556 ARAEILDIHTRKWKQPP-SRELK-SELAAS--CVGYCGADLKALCTEAAIRAFREKYPQV 611
R IL T+ +PP ++ E+A S C Y GADL AL EA+I A R++
Sbjct: 753 DRLAILKTITKDGTRPPLDTDVNLEEIAYSQQCDCYTGADLSALVREASICALRQEMALP 812
Query: 612 YTSDDKFLIDVDSVTVEKYHFIEAMSTI 639
T K + + + + HF EA +
Sbjct: 813 TTKSKK---EKGEIKISRKHFEEAFRKV 837
Score = 400 (145.9 bits), Expect = 2.0e-34, Sum P(2) = 2.0e-34
Identities = 95/230 (41%), Positives = 136/230 (59%)
Query: 375 SVSFDDIGGLSEYIDALKEMVFFPLLYPDFFASYHITPPRGVLLCGPPGTGKTLIARALA 434
SV F+D+GG E + + +M+ + +P+ + + PPRG LL GPPG GKTL+A+A+A
Sbjct: 256 SVKFEDVGGNDETLKEICKMLIH-VRHPEVYLHLGVVPPRGFLLHGPPGCGKTLLAQAIA 314
Query: 435 CAASKAGQKVSFYMRKGADVLSKWVGEAERQLKLLFEEAQRNQPSIIFFDEIDGLAPVRS 494
KV+ +++S GE+E++L+ LF++A N P ++F DEID + P R
Sbjct: 315 GELELPMLKVA-----ATEMVSGVSGESEQKLRELFDQAVLNAPCVLFIDEIDAITPKRE 369
Query: 495 SKQEQIHNSIVSTLLALMDGLDS---RGQVVLIGATNRVDAIDGALRRPGRFDREFNFPL 551
+ + IV+ LL +D L++ QV++IGATNR D++D ALRR GRFDRE +
Sbjct: 370 VASKDMERRIVAQLLTCLDDLNNVAATAQVLVIGATNRPDSLDPALRRAGRFDREICLGI 429
Query: 552 PGCEARAEILDIHTRKWKQPPSRELKSELAASCVGYCGADLKALCTEAAI 601
P AR +IL RK K P S + LA GY GADL ALC EAA+
Sbjct: 430 PDEAAREKILQTLCRKLKLPGSFDFL-HLAHLTPGYVGADLMALCREAAM 478
Score = 56 (24.8 bits), Expect = 2.0e-34, Sum P(2) = 2.0e-34
Identities = 34/151 (22%), Positives = 62/151 (41%)
Query: 622 VDSVTVEKYHFIEAMSTITPAAHRGATVHSRPLSLVVAPCLQRHLQKAMNYISDIFPPLG 681
+ + +E FI A+S++ P+A R V P + + + D+ L
Sbjct: 546 LQKLCIEMNDFIVALSSVQPSAKREG--------FVTIPDVT---WADIGALEDVREELT 594
Query: 682 MSSELTKLCMLSHGSAIPLVYRPRLLLCGSEGTGVDHLGPAILHELEKFPVHSLGLPALL 741
M+ L + A+ L +LL G G G L A+ +E + G P LL
Sbjct: 595 MAI-LAPVRNPEQFKALGLTTPAGVLLAGPPGCGKTLLAKAVANESGLNFISVKG-PELL 652
Query: 742 SDPSAKTPEEALVHIFGEARRTTPSILYIPQ 772
+ ++ E A+ +F AR + P +++ +
Sbjct: 653 NMYVGES-ERAVRQVFQRARNSAPCVIFFDE 682
>UNIPROTKB|Q2KIW6 [details] [associations]
symbol:PSMC6 "26S protease regulatory subunit 10B"
species:9913 "Bos taurus" [GO:0022624 "proteasome accessory
complex" evidence=ISS] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0030163 "protein catabolic process" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 HSSP:Q9WZ49 KO:K03064 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 GO:GO:0022624 EMBL:BC112482
IPI:IPI00707369 RefSeq:NP_001039705.1 UniGene:Bt.22570
ProteinModelPortal:Q2KIW6 STRING:Q2KIW6 PRIDE:Q2KIW6 GeneID:518637
KEGG:bta:518637 CTD:5706 HOGENOM:HOG000225143 InParanoid:Q2KIW6
OrthoDB:EOG408N84 NextBio:20872697 Uniprot:Q2KIW6
Length = 389
Score = 411 (149.7 bits), Expect = 2.1e-37, P = 2.1e-37
Identities = 98/244 (40%), Positives = 140/244 (57%)
Query: 375 SVSFDDIGGLSEYIDALKEMVFFPLLYPDFFASYHITPPRGVLLCGPPGTGKTLIARALA 434
+VS+ +IGGLSE I L+E++ PL P+ F I PP+G LL GPPGTGKTL+ARA+A
Sbjct: 129 NVSYSEIGGLSEQIRELREVIELPLTNPELFQRVGIIPPKGCLLYGPPGTGKTLLARAVA 188
Query: 435 CAASKAGQKVSFYMRKGADVLSKWVGEAERQLKLLFEEAQRNQPSIIFFDEIDGLAPVRS 494
+F + ++ K++GE+ R ++ +F A+ +QP IIF DEID + R
Sbjct: 189 SQLD-----CNFLKVVSSSIVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGGRRF 243
Query: 495 SKQEQIHNSIVSTLLAL---MDGLDSRGQVVLIGATNRVDAIDGALRRPGRFDREFNFPL 551
S+ I TL+ L MDG D+ +V +I ATNR D +D AL RPGR DR+ + L
Sbjct: 244 SEGTSADREIQRTLMELLNQMDGFDTLHRVKMIMATNRPDTLDPALLRPGRLDRKIHIDL 303
Query: 552 PGCEARAEILDIHTRKWKQPPSRELKSELAASCVGYCGADLKALCTEAAIRAFREKYPQV 611
P +AR +IL IH + + ++ + S G+ GADL +CTEA + A R + V
Sbjct: 304 PNEQARLDILKIHAGPITKHGEIDYEAIVKLSD-GFNGADLGNVCTEAGMFAIRADHDFV 362
Query: 612 YTSD 615
D
Sbjct: 363 VQED 366
>FB|FBgn0016983 [details] [associations]
symbol:smid "smallminded" species:7227 "Drosophila
melanogaster" [GO:0016887 "ATPase activity" evidence=ISS;NAS]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0022008 "neurogenesis"
evidence=IMP] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 EMBL:AE014296 GO:GO:0022008 GO:GO:0016887 HSSP:Q01853
KO:K14571 GeneTree:ENSGT00570000079239 UniGene:Dm.875 GeneID:38824
KEGG:dme:Dmel_CG8571 CTD:38824 FlyBase:FBgn0016983 GenomeRNAi:38824
NextBio:810567 RefSeq:NP_523959.2 ProteinModelPortal:Q9VS62
SMR:Q9VS62 IntAct:Q9VS62 MINT:MINT-754496 STRING:Q9VS62
PRIDE:Q9VS62 EnsemblMetazoa:FBtr0076851 UCSC:CG8571-RA
InParanoid:Q9VS62 OMA:EFDSLCP PhylomeDB:Q9VS62 ArrayExpress:Q9VS62
Bgee:Q9VS62 Uniprot:Q9VS62
Length = 944
Score = 438 (159.2 bits), Expect = 2.6e-37, Sum P(2) = 2.6e-37
Identities = 113/304 (37%), Positives = 169/304 (55%)
Query: 346 TLAALTSGIQTAGPSSKGGADIQPLQVDESVSFDDIGGLSEYIDALKEMVFFPLLYPDFF 405
TL I+ PS+K I V ++ ++DDIG L + + LK V P+ YP+
Sbjct: 633 TLIDFVDAIKVMQPSAKREGFIT---VPDT-TWDDIGALEKIREELKLAVLAPVKYPEML 688
Query: 406 ASYHITPPRGVLLCGPPGTGKTLIARALACAASKAGQKVSFYMRKGADVLSKWVGEAERQ 465
+T P GVLLCGPPG GKTL+A+A+A ++AG ++F KG ++++ +VGE+ER
Sbjct: 689 ERLGLTAPSGVLLCGPPGCGKTLLAKAIA---NEAG--INFISVKGPELMNMYVGESERA 743
Query: 466 LKLLFEEAQRNQPSIIFFDEIDGLAPVRSSKQEQIHNS---IVSTLLALMDGLDSRGQVV 522
++ F+ A+ + P +IFFDE D L P RS + +NS IV+ LL MDG++ R V
Sbjct: 744 VRACFQRARNSAPCVIFFDEFDSLCPKRSDGGDG-NNSGTRIVNQLLTEMDGVEERKGVY 802
Query: 523 LIGATNRVDAIDGALRRPGRFDREFNFPLPGCEARAEILDIHTRKWKQPP-SRELK-SEL 580
++ ATNR D ID A+ RPGR D P R EIL T+ K+P + ++ E+
Sbjct: 803 ILAATNRPDIIDPAILRPGRLDTILYVGFPEQSERTEILKATTKNGKRPVLADDVDLDEI 862
Query: 581 AASCVGYCGADLKALCTEAAIRAFREKYPQVYTSDDKFLIDVDSVTVEKYHFIEAMSTIT 640
AA GY GADL L +A++ + R Q + D ++D + V HF EA+ +
Sbjct: 863 AAQTEGYTGADLAGLVKQASMFSLR----QSLNNGDT---NLDDLCVRSQHFQEALQQLR 915
Query: 641 PAAH 644
P+ +
Sbjct: 916 PSVN 919
Score = 326 (119.8 bits), Expect = 9.3e-27, Sum P(3) = 9.3e-27
Identities = 87/254 (34%), Positives = 134/254 (52%)
Query: 377 SFDDIGGLSEYIDALKEMVFFPLLYPDFFASYHITPPRGVLLCGPPGTGKTLIARALACA 436
SF DIGG+ + L EM+ + P+F+ + P RG+LL GPPG GKT +ARA++
Sbjct: 249 SFRDIGGMDSTLKELCEMLIH-IKSPEFYFQLGLLPSRGLLLHGPPGCGKTFLARAIS-- 305
Query: 437 ASKAGQ-KVSFYMRKGADVLSKWVGEAERQLKLLFEEAQRNQPSIIFFDEIDGLAPVRSS 495
GQ K+ +++ GE+E +++ +F++A P ++F DEID + R
Sbjct: 306 ----GQLKMPLMEIPATELIGGISGESEERIREVFDQAIGYSPCVLFIDEIDAIGGNRQW 361
Query: 496 KQEQIHNSIVSTLLALMDGLDSR--GQ-VVLIGATNRVDAIDGALRRPGRFDREFNFPLP 552
+ + IVS L++ +D L + GQ VV+I AT R D +D LRR GRFD E +P
Sbjct: 362 ASKDMERRIVSQLISSLDNLKANEFGQSVVVIAATTRPDVLDPGLRRIGRFDHEIAIHIP 421
Query: 553 GCEARAEILDIHTRKWKQPPSRELKSELAASCVGYCGADLKALCTEAAIRAFR----EKY 608
+ R EIL I P ++A GY GADL AL + AA A + +K+
Sbjct: 422 SRKERREILRIQCEGLSVDPKLNY-DKIAELTPGYVGADLMALVSRAASVAVKRRSMKKF 480
Query: 609 PQVYTSDDKFLIDV 622
+++ + +K + V
Sbjct: 481 RELHAASEKNMTTV 494
Score = 63 (27.2 bits), Expect = 9.3e-27, Sum P(3) = 9.3e-27
Identities = 20/69 (28%), Positives = 34/69 (49%)
Query: 706 LLLCGSEGTGVDHLGPAILHELEKFPVHSLGLPALLSDPSAKTPEEALVHIFGEARRTTP 765
+LLCG G G L AI +E + G P L++ ++ E A+ F AR + P
Sbjct: 699 VLLCGPPGCGKTLLAKAIANEAGINFISVKG-PELMNMYVGES-ERAVRACFQRARNSAP 756
Query: 766 SILYIPQFN 774
+++ +F+
Sbjct: 757 CVIFFDEFD 765
Score = 45 (20.9 bits), Expect = 2.6e-37, Sum P(2) = 2.6e-37
Identities = 18/54 (33%), Positives = 24/54 (44%)
Query: 89 SVNLEDYT-DSSGSEDEDLM-RPSYRPLRNRMRNNMSQDELSPSKRKKVVEAKP 140
S+ E Y D S +ED + S P N + NNM + L RK + KP
Sbjct: 63 SIISESYNLDKVSSSEEDCVSEDSEPPPTNSVMNNM-MNSLYSQPRKPLAP-KP 114
Score = 42 (19.8 bits), Expect = 1.9e-26, Sum P(3) = 1.9e-26
Identities = 16/52 (30%), Positives = 21/52 (40%)
Query: 89 SVNLEDYTDSSGSED---EDLMRPSYRPLRNRMRNNMSQDELSPSKRKKVVE 137
S NL+ SS ED ED P + N M N++ P K + E
Sbjct: 68 SYNLDKV--SSSEEDCVSEDSEPPPTNSVMNNMMNSLYSQPRKPLAPKPISE 117
Score = 40 (19.1 bits), Expect = 8.8e-37, Sum P(2) = 8.8e-37
Identities = 11/59 (18%), Positives = 24/59 (40%)
Query: 4 KRSGQGDGSVPGPVRTSDRLRRRPKILGRTYLYYNPIRPRKSKTKARTAASQIARMFGP 62
K++ G+ S+ P +T + +P P P+K+ + ++S + P
Sbjct: 551 KKATNGNSSIKSPQKTPKKSAEKPTDAAMDVDNVAPEEPKKAVEQEVDSSSSNDEYYEP 609
>TAIR|locus:2007574 [details] [associations]
symbol:PEX6 "peroxin 6" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0009507 "chloroplast"
evidence=ISM] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0016558 "protein import into peroxisome matrix" evidence=IMP]
[GO:0006635 "fatty acid beta-oxidation" evidence=IMP] [GO:0005515
"protein binding" evidence=IPI] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005524
GO:GO:0005737 GO:GO:0006635 GO:GO:0016558 HSSP:Q01853
eggNOG:COG0464 GO:GO:0017111 EMBL:AC006550 TCDB:3.A.20.1.2
EMBL:AY333116 EMBL:AY078962 EMBL:BT001151 IPI:IPI00517292
PIR:F86160 RefSeq:NP_171799.2 UniGene:At.42567
ProteinModelPortal:Q8RY16 SMR:Q8RY16 STRING:Q8RY16 PaxDb:Q8RY16
PRIDE:Q8RY16 EnsemblPlants:AT1G03000.1 GeneID:839315
KEGG:ath:AT1G03000 GeneFarm:2442 TAIR:At1g03000
HOGENOM:HOG000241031 InParanoid:Q8RY16 KO:K13339 OMA:RRCFSHE
PhylomeDB:Q8RY16 ProtClustDB:CLSN2690380 Genevestigator:Q8RY16
Uniprot:Q8RY16
Length = 941
Score = 433 (157.5 bits), Expect = 3.2e-37, P = 3.2e-37
Identities = 106/274 (38%), Positives = 163/274 (59%)
Query: 375 SVSFDDIGGLSEYIDALKEMVFFPLLYPDFFASYHITPPRGVLLCGPPGTGKTLIARALA 434
+V +DD+GGL + ++ + V PLL+ D F+S + GVLL GPPGTGKTL+A+A+A
Sbjct: 654 NVKWDDVGGLEDVKTSILDTVQLPLLHKDLFSS-GLRKRSGVLLYGPPGTGKTLLAKAVA 712
Query: 435 CAASKAGQKVSFYMRKGADVLSKWVGEAERQLKLLFEEAQRNQPSIIFFDEIDGLAPVRS 494
S ++F KG ++++ ++GE+E+ ++ +FE+A+ +P +IFFDE+D LAP R
Sbjct: 713 TECS-----LNFLSVKGPELINMYIGESEKNVRDIFEKARSARPCVIFFDELDSLAPARG 767
Query: 495 SKQEQ--IHNSIVSTLLALMDGL-DSRGQVVLIGATNRVDAIDGALRRPGRFDREFNFPL 551
+ + + + +VS +LA +DGL DS + +IGA+NR D ID AL RPGRFD+ +
Sbjct: 768 ASGDSGGVMDRVVSQMLAEIDGLSDSSQDLFIIGASNRPDLIDPALLRPGRFDKLLYVGV 827
Query: 552 PG-CEARAEILDIHTRKWKQPPSRELKSELAASCVG-YCGADLKALCTEAAIRAFREKYP 609
R +L TRK+K L S +A C + GAD+ ALC +A +A + K
Sbjct: 828 NADASYRERVLKALTRKFKLSEDVSLYS-VAKKCPSTFTGADMYALCADAWFQAAKRKVS 886
Query: 610 QVYTSD-DKFLIDVDSVTVEKYHFIEAMSTITPA 642
+ + D D DSV VE FI+AM ++P+
Sbjct: 887 KSDSGDMPTEEDDPDSVVVEYVDFIKAMDQLSPS 920
>CGD|CAL0005827 [details] [associations]
symbol:RPT4 species:5476 "Candida albicans" [GO:0005634
"nucleus" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0008540 "proteasome regulatory particle, base subcomplex"
evidence=IEA] [GO:0019904 "protein domain specific binding"
evidence=IEA] [GO:0070682 "proteasome regulatory particle assembly"
evidence=IEA] [GO:0032968 "positive regulation of transcription
elongation from RNA polymerase II promoter" evidence=IEA]
[GO:0045899 "positive regulation of RNA polymerase II
transcriptional preinitiation complex assembly" evidence=IEA]
[GO:0030433 "ER-associated protein catabolic process" evidence=IEA]
[GO:0006289 "nucleotide-excision repair" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
CGD:CAL0005827 GO:GO:0005524 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 EMBL:AACQ01000055 EMBL:AACQ01000054 KO:K03064
eggNOG:COG1222 TIGRFAMs:TIGR01242 RefSeq:XP_717345.1
RefSeq:XP_717434.1 ProteinModelPortal:Q5A6S2 STRING:Q5A6S2
GeneID:3640859 GeneID:3640966 KEGG:cal:CaO19.482
KEGG:cal:CaO19.8112 Uniprot:Q5A6S2
Length = 428
Score = 409 (149.0 bits), Expect = 3.5e-37, P = 3.5e-37
Identities = 93/243 (38%), Positives = 137/243 (56%)
Query: 376 VSFDDIGGLSEYIDALKEMVFFPLLYPDFFASYHITPPRGVLLCGPPGTGKTLIARALAC 435
+SF+ IGGL+E I L+E++ PL P+ F I PP+GVLL GPPGTGKTL+A+A+A
Sbjct: 169 ISFNGIGGLTEQIRELREVIELPLKNPELFTRVGIKPPKGVLLYGPPGTGKTLLAKAVAA 228
Query: 436 AASKAGQKVSFYMRKGADVLSKWVGEAERQLKLLFEEAQRNQPSIIFFDEIDGLAPVRSS 495
+F + ++ K++GE+ R ++ +F A+ ++P IIF DE+D + R S
Sbjct: 229 TIG-----ANFIFSPASAIVDKYIGESARLIREMFAYAKEHEPCIIFMDEVDAIGGRRFS 283
Query: 496 KQEQIHNSIVSTLLAL---MDGLDSRGQVVLIGATNRVDAIDGALRRPGRFDREFNFPLP 552
+ I TL+ L MDG D+ GQ +I ATNR D +D AL R GR DR+ LP
Sbjct: 284 EGTSADREIQRTLMELLNQMDGFDTLGQTKIIMATNRPDTLDPALLRAGRLDRKIEIGLP 343
Query: 553 GCEARAEILDIHTRKWKQPPSRELKSELAASCVGYCGADLKALCTEAAIRAFREKYPQVY 612
R EI IHT K + + ++ + S G+ GAD++ + TEA A R+ +
Sbjct: 344 NEAGRLEIFKIHTSKVAKQGEFDFEAAVKMSD-GFNGADIRNVVTEAGFFAIRDDRDYIL 402
Query: 613 TSD 615
+D
Sbjct: 403 QND 405
>POMBASE|SPBC4.07c [details] [associations]
symbol:rpt2 "19S proteasome regulatory subunit Rpt2"
species:4896 "Schizosaccharomyces pombe" [GO:0005515 "protein
binding" evidence=IPI] [GO:0005524 "ATP binding" evidence=IC]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005829 "cytosol"
evidence=IDA] [GO:0007346 "regulation of mitotic cell cycle"
evidence=IC] [GO:0008540 "proteasome regulatory particle, base
subcomplex" evidence=IGI] [GO:0016887 "ATPase activity"
evidence=ISO] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=IMP] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 PomBase:SPBC4.07c
GO:GO:0005829 GO:GO:0005524 GO:GO:0005634 GO:GO:0007346
GO:GO:0043161 EMBL:CU329671 GenomeReviews:CU329671_GR GO:GO:0016887
eggNOG:COG1222 TIGRFAMs:TIGR01242 HOGENOM:HOG000225143
GO:GO:0008540 KO:K03062 OMA:FIRNQER EMBL:Z29366 PIR:S39348
RefSeq:NP_595480.1 ProteinModelPortal:P36612 IntAct:P36612
STRING:P36612 PRIDE:P36612 EnsemblFungi:SPBC4.07c.1 GeneID:2540939
KEGG:spo:SPBC4.07c OrthoDB:EOG4FN7S6 NextBio:20802054
Uniprot:P36612
Length = 448
Score = 388 (141.6 bits), Expect = 3.9e-37, Sum P(2) = 3.9e-37
Identities = 94/255 (36%), Positives = 141/255 (55%)
Query: 367 IQPLQVDESV--SFDDIGGLSEYIDALKEMVFFPLLYPDFFASYHITPPRGVLLCGPPGT 424
I +++D++ S+ DIGGL I +KE V PL +P+ + I PP+GV+L G PGT
Sbjct: 177 INVMKLDKAPTESYADIGGLESQIQEIKEAVELPLTHPELYEEMGIKPPKGVILYGAPGT 236
Query: 425 GKTLIARALACAASKAGQKVSFYMRKGADVLSKWVGEAERQLKLLFEEAQRNQPSIIFFD 484
GKTL+A+A+A S +F G++++ K++G+ R ++ LF A+ + PSI+F D
Sbjct: 237 GKTLLAKAVANQTS-----ATFLRVVGSELIQKYLGDGPRLVRQLFNAAEEHSPSIVFID 291
Query: 485 EIDGLAPVRSSKQEQIHNSIVSTLLALM---DGLD-SRGQVVLIGATNRVDAIDGALRRP 540
EID + R Q I T+L L+ DG D S+ + +I ATNR+ +D AL RP
Sbjct: 292 EIDAIGTKRYDAQSGAEREIQRTMLELLNQLDGFDTSQRDIKVIMATNRISDLDPALIRP 351
Query: 541 GRFDREFNFPLPGCEARAEILDIHTRKWKQPPSRELKSELAASCVGYCGADLKALCTEAA 600
GR DR+ F P + +I IHT K L+ EL GA++KA+ +EA
Sbjct: 352 GRIDRKILFENPDEATKRKIFTIHTSKMNLGEDVNLE-ELIQCKDDLSGAEIKAIVSEAG 410
Query: 601 IRAFREKYPQVYTSD 615
+ A RE+ +V D
Sbjct: 411 LLALRERRMRVVMDD 425
Score = 47 (21.6 bits), Expect = 3.9e-37, Sum P(2) = 3.9e-37
Identities = 14/44 (31%), Positives = 21/44 (47%)
Query: 103 DEDLMRPSYRPLRNRMRNNMSQDELSPSKRKKVVEAKPTPRREG 146
D LM Y + R++ QDE + +R +V E + TP G
Sbjct: 77 DHLLMEEEYVQNQERLK---PQDERTQEERNRVDEIRGTPMSVG 117
Score = 47 (21.6 bits), Expect = 3.9e-37, Sum P(2) = 3.9e-37
Identities = 22/103 (21%), Positives = 41/103 (39%)
Query: 91 NLEDYTDSSGSEDEDLMRPSYRP-LRNRMRNNMSQDELSPSKRKKVVEAKPTPRREGLRP 149
N D + +D+ +P Y P + R + + P K+ PT R LR
Sbjct: 11 NFGDGANGDNKKDQKKDKPKYEPPVPTRTGRRKKKAQSGPDASAKLPTVIPTTRCR-LRL 69
Query: 150 RRSMVATRKQLNLDSGDEQGSSEEKVGQDETENGNESDNDADD 192
+ M L ++ +E ++E++ + + E E N D+
Sbjct: 70 LK-MQRIHDHLLME--EEYVQNQERL-KPQDERTQEERNRVDE 108
>POMBASE|SPBC16E9.10c [details] [associations]
symbol:SPBC16E9.10c "AAA family ATPase Rix7
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0000055
"ribosomal large subunit export from nucleus" evidence=ISO]
[GO:0005524 "ATP binding" evidence=IC] [GO:0005634 "nucleus"
evidence=ISO;IDA] [GO:0005730 "nucleolus" evidence=ISO] [GO:0016887
"ATPase activity" evidence=ISO] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 PomBase:SPBC16E9.10c GO:GO:0005524 GO:GO:0005730
EMBL:CU329671 GO:GO:0016887 HSSP:Q01853 eggNOG:COG0464
HOGENOM:HOG000223225 GO:GO:0000055 KO:K14571 OMA:NDMTLKE
OrthoDB:EOG40GH00 PIR:T39584 RefSeq:NP_595792.1
ProteinModelPortal:O14325 STRING:O14325 EnsemblFungi:SPBC16E9.10c.1
GeneID:2539968 KEGG:spo:SPBC16E9.10c NextBio:20801111
Uniprot:O14325
Length = 779
Score = 416 (151.5 bits), Expect = 6.5e-37, Sum P(2) = 6.5e-37
Identities = 99/240 (41%), Positives = 141/240 (58%)
Query: 376 VSFDDIGGLSEYIDALKEMVFFPLLYPDFFASYHITPPRGVLLCGPPGTGKTLIARALAC 435
+S DIGGL + I+ L E+V P+ +P+ + I PPRGVLL GPPG GKT++A ALA
Sbjct: 171 ISLSDIGGLDDCINELLELVAMPIKHPEVYQYTGIHPPRGVLLHGPPGCGKTMLANALA- 229
Query: 436 AASKAGQKVSFYMRKGADVLSKWVGEAERQLKLLFEEAQRNQPSIIFFDEIDGLAPVRSS 495
++ G V F ++S GE+E++++ +FEEA+ P ++F DEID + P R S
Sbjct: 230 --NELG--VPFISISAPSIVSGMSGESEKKVREVFEEAKSLAPCLMFIDEIDAVTPKRES 285
Query: 496 KQEQIHNSIVSTLLALMDGLD---SRGQVVL-IGATNRVDAIDGALRRPGRFDREFNFPL 551
Q ++ IV+ L MD L + G+ VL IGATNR D++D ALRR GRFDRE +
Sbjct: 286 AQREMERRIVAQFLTCMDELSFEKTDGKPVLVIGATNRPDSLDSALRRAGRFDREICLTV 345
Query: 552 PGCEARAEILDIHTRKWKQPPSRELKSELAASCVGYCGADLKALCTEAAIRAFREKYPQV 611
P +AR +IL + K + + +LA GY GADLKAL A I A + + ++
Sbjct: 346 PSQDAREKILRTMAKGLKLSGDFDFR-QLAKQTPGYVGADLKALTAAAGIIAIKRIFNEI 404
Score = 399 (145.5 bits), Expect = 1.0e-33, P = 1.0e-33
Identities = 93/233 (39%), Positives = 135/233 (57%)
Query: 376 VSFDDIGGLSEYIDALKEMVFFPLLYPDFFASYHITPPRGVLLCGPPGTGKTLIARALAC 435
VS+++IG L L+ + P+ P+ + S I+ P GVLL GPPG GKTL+A+A+A
Sbjct: 489 VSWNNIGALKSIRVELQMAIVQPIKRPELYQSVGISAPTGVLLWGPPGCGKTLLAKAVA- 547
Query: 436 AASKAGQKVSFYMRKGADVLSKWVGEAERQLKLLFEEAQRNQPSIIFFDEIDGLAPVRSS 495
SKA +F +G ++L+K+VGE+ER ++ +F A+ + P +IFFDE+D + P R
Sbjct: 548 NESKA----NFISIRGPELLNKYVGESERAVRQVFLRARASSPCVIFFDELDAMVPRRDD 603
Query: 496 KQEQIHNSIVSTLLALMDGLDSRGQVVLIGATNRVDAIDGALRRPGRFDREFNFPLPGCE 555
+ + +V+TLL +DGL R V +I ATNR D ID A+ RPGR D+ LP
Sbjct: 604 SLSEASSRVVNTLLTELDGLSDRSGVYVIAATNRPDIIDPAMLRPGRLDKTLLVDLPDAH 663
Query: 556 ARAEILDIHTRKWKQPPSRELKSELAAS---CVGYCGADLKALCTEAAIRAFR 605
R EIL T++ P E+ ++ C + GADL AL EAA+ A R
Sbjct: 664 ERVEILKTLTKQ--TPLHEEVNLDVLGRDERCSNFSGADLAALVREAAVTALR 714
Score = 60 (26.2 bits), Expect = 6.5e-37, Sum P(2) = 6.5e-37
Identities = 40/157 (25%), Positives = 74/157 (47%)
Query: 621 DVDSVTVEKYHFIEAMSTITPAAHR-G-ATVHSRPLSLVVA-PCLQRHLQKAMNYISDIF 677
+++ + + FIEA++ + P++ R G ATV + + A ++ LQ A+ + I
Sbjct: 456 ELEPLAICPQDFIEALAKVQPSSKREGFATVPGVSWNNIGALKSIRVELQMAI--VQPIK 513
Query: 678 PPLGMSSELTKLCMLSHGSAIPLVYRPRLLLCGSEGTGVDHLGPAILHELEKFPVHSLGL 737
P EL + S G + P +LL G G G L A+ +E K S+
Sbjct: 514 RP-----ELYQ----SVGISAPT----GVLLWGPPGCGKTLLAKAVANE-SKANFISIRG 559
Query: 738 PALLSDPSAKTPEEALVHIFGEARRTTPSILYIPQFN 774
P LL+ ++ E A+ +F AR ++P +++ + +
Sbjct: 560 PELLNKYVGES-ERAVRQVFLRARASSPCVIFFDELD 595
>WB|WBGene00003119 [details] [associations]
symbol:mac-1 species:6239 "Caenorhabditis elegans"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA]
[GO:0006310 "DNA recombination" evidence=IEA] [GO:0009378 "four-way
junction helicase activity" evidence=IEA] [GO:0040007 "growth"
evidence=IMP] [GO:0002119 "nematode larval development"
evidence=IMP] [GO:0006629 "lipid metabolic process" evidence=IMP]
[GO:0000003 "reproduction" evidence=IMP] [GO:0019915 "lipid
storage" evidence=IMP] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0040007 GO:GO:0002119 GO:GO:0006629
GO:GO:0000003 GO:GO:0019915 HSSP:Q01853 eggNOG:COG0464
HOGENOM:HOG000223225 GO:GO:0017111 KO:K14571 OMA:NDMTLKE
GeneTree:ENSGT00570000079239 EMBL:AL117203 PIR:T31591
RefSeq:NP_496814.1 ProteinModelPortal:Q9NAG4 SMR:Q9NAG4
IntAct:Q9NAG4 STRING:Q9NAG4 PaxDb:Q9NAG4 EnsemblMetazoa:Y48C3A.7
GeneID:174974 KEGG:cel:CELE_Y48C3A.7 UCSC:Y48C3A.7 CTD:174974
WormBase:Y48C3A.7 InParanoid:Q9NAG4 NextBio:886252
ArrayExpress:Q9NAG4 Uniprot:Q9NAG4
Length = 813
Score = 428 (155.7 bits), Expect = 7.3e-37, P = 7.3e-37
Identities = 118/316 (37%), Positives = 175/316 (55%)
Query: 343 QGD----TLAALTSGIQTAGPS-SKGGADIQPLQVDES------VSFDDIGGLSEYIDAL 391
QGD L+ L G+Q + + + IQP E VS+DDIG L E L
Sbjct: 486 QGDDDPSALSELNGGLQISFEDFERALSTIQPAAKREGFATVPDVSWDDIGALVEVRKQL 545
Query: 392 KEMVFFPLLYPDFFASYHIT-PPRGVLLCGPPGTGKTLIARALACAASKAGQKVSFYMRK 450
+ + +P+ D FA+ I P+G+LLCGPPG GKTL+A+A+A ++ G ++F K
Sbjct: 546 EWSILYPIKRADDFAALGIDCRPQGILLCGPPGCGKTLLAKAVA---NETG--MNFISVK 600
Query: 451 GADVLSKWVGEAERQLKLLFEEAQRNQPSIIFFDEIDGLAPVRSSKQEQIHNSIVSTLLA 510
G ++L+ +VGE+ER ++ +F+ A+ +QP +IFFDEID L P RS + +V+ LL
Sbjct: 601 GPELLNMYVGESERAVRTVFQRARDSQPCVIFFDEIDALVPKRSHGESSGGARLVNQLLT 660
Query: 511 LMDGLDSRGQVVLIGATNRVDAIDGALRRPGRFDREFNFPLPGCEARAEILDIHTRKWKQ 570
MDG++ R +V LIGATNR D +D A+ RPGR D+ P E R +IL T+ +
Sbjct: 661 EMDGVEGRQKVFLIGATNRPDIVDAAILRPGRLDKILFVDFPSVEDRVDILRKSTKNGTR 720
Query: 571 PP-SRELK-SELAA--SCVGYCGADLKALCTEAAIRAFREKYPQVYTSDDKFLIDVDSVT 626
P ++ E+A G+ GADL AL E+++ A + + V +D+ V V
Sbjct: 721 PMLGEDIDFHEIAQLPELAGFTGADLAALIHESSLLALQAR---VLENDES----VKGVG 773
Query: 627 VEKYHFIEAMSTITPA 642
+ HF EA S I P+
Sbjct: 774 MR--HFREAASRIRPS 787
Score = 208 (78.3 bits), Expect = 1.6e-24, Sum P(2) = 1.6e-24
Identities = 53/167 (31%), Positives = 90/167 (53%)
Query: 353 GIQTAGPS-SKG-GADIQPLQVDES-VSFDDIGGLS-EYIDALKEMVFFPLLYPDFFASY 408
G A P+ +G GA + ES V F+ IGG ++++ + + L P FA+
Sbjct: 177 GASAAPPALPRGLGAVSDTISPRESHVKFEHIGGADRQFLEVCR--LAMHLKRPKTFATL 234
Query: 409 HITPPRGVLLCGPPGTGKTLIARALACAASKAGQKVSFYMRKGADVLSKWVGEAERQLKL 468
+ PPRG ++ GPPG GKT+ A+A+A + + +++S GE E +++
Sbjct: 235 GVDPPRGFIVHGPPGCGKTMFAQAVAGELA-----IPMLQLAATELVSGVSGETEEKIRR 289
Query: 469 LFEEAQRNQPSIIFFDEIDGLAPVRSSKQEQIHNSIVSTLLALMDGL 515
LF+ A++N P I+ D+ID +AP R + Q ++ +VS L + +D L
Sbjct: 290 LFDTAKQNSPCILILDDIDAIAPRRETAQREMERRVVSQLCSSLDEL 336
Score = 162 (62.1 bits), Expect = 1.6e-24, Sum P(2) = 1.6e-24
Identities = 80/310 (25%), Positives = 138/310 (44%)
Query: 484 DEIDGLAPVRSSKQEQIHNSIVSTLLALMDGLDSRGQ-VVLIGATNRVDAIDGALRRPGR 542
DE+ L P ++Q+ ++ + D + G V++IG T+R DA+DG LRR GR
Sbjct: 334 DELV-LPPREKPLKDQLTFGDDGSVAIIGDSPTAAGAGVLVIGTTSRPDAVDGGLRRAGR 392
Query: 543 FDREFNFPLPGCEARAEILDIHTRKWKQPPSRELKSELAASCVGYCGADLKALCTEAAIR 602
F+ E + +P AR +IL+ K LK ++A GY GADL+AL EAA
Sbjct: 393 FENEISLGIPDETAREKILE-KICKVNLAGDVTLK-QIAKLTPGYVGADLQALIREAAKV 450
Query: 603 AFREKYPQVYTSDDKFL-IDVDSVTVEKYHFI---------EAMSTITPAAHRGATVHSR 652
A + + ++ + V+ + E + A+S + R
Sbjct: 451 AIDRVFDTIVVKNEGHKNLTVEQIKEELDRVLAWLQGDDDPSALSELNGGLQISFEDFER 510
Query: 653 PLSLVVAPCLQRHLQKAMNYIS--DIFPPLGMSSEL--TKLCMLSHG---SAIPLVYRPR 705
LS + P +R + +S DI + + +L + L + +A+ + RP+
Sbjct: 511 ALS-TIQPAAKREGFATVPDVSWDDIGALVEVRKQLEWSILYPIKRADDFAALGIDCRPQ 569
Query: 706 -LLLCGSEGTGVDHLGPAILHELEKFPVHSLGLPALLSDPSAKTPEEALVHIFGEARRTT 764
+LLCG G G L A+ +E + G P LL+ ++ E A+ +F AR +
Sbjct: 570 GILLCGPPGCGKTLLAKAVANETGMNFISVKG-PELLNMYVGES-ERAVRTVFQRARDSQ 627
Query: 765 PSILYIPQFN 774
P +++ + +
Sbjct: 628 PCVIFFDEID 637
>UNIPROTKB|Q9NAG4 [details] [associations]
symbol:mac-1 "Protein MAC-1" species:6239 "Caenorhabditis
elegans" [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0040007 GO:GO:0002119 GO:GO:0006629 GO:GO:0000003
GO:GO:0019915 HSSP:Q01853 eggNOG:COG0464 HOGENOM:HOG000223225
GO:GO:0017111 KO:K14571 OMA:NDMTLKE GeneTree:ENSGT00570000079239
EMBL:AL117203 PIR:T31591 RefSeq:NP_496814.1
ProteinModelPortal:Q9NAG4 SMR:Q9NAG4 IntAct:Q9NAG4 STRING:Q9NAG4
PaxDb:Q9NAG4 EnsemblMetazoa:Y48C3A.7 GeneID:174974
KEGG:cel:CELE_Y48C3A.7 UCSC:Y48C3A.7 CTD:174974 WormBase:Y48C3A.7
InParanoid:Q9NAG4 NextBio:886252 ArrayExpress:Q9NAG4 Uniprot:Q9NAG4
Length = 813
Score = 428 (155.7 bits), Expect = 7.3e-37, P = 7.3e-37
Identities = 118/316 (37%), Positives = 175/316 (55%)
Query: 343 QGD----TLAALTSGIQTAGPS-SKGGADIQPLQVDES------VSFDDIGGLSEYIDAL 391
QGD L+ L G+Q + + + IQP E VS+DDIG L E L
Sbjct: 486 QGDDDPSALSELNGGLQISFEDFERALSTIQPAAKREGFATVPDVSWDDIGALVEVRKQL 545
Query: 392 KEMVFFPLLYPDFFASYHIT-PPRGVLLCGPPGTGKTLIARALACAASKAGQKVSFYMRK 450
+ + +P+ D FA+ I P+G+LLCGPPG GKTL+A+A+A ++ G ++F K
Sbjct: 546 EWSILYPIKRADDFAALGIDCRPQGILLCGPPGCGKTLLAKAVA---NETG--MNFISVK 600
Query: 451 GADVLSKWVGEAERQLKLLFEEAQRNQPSIIFFDEIDGLAPVRSSKQEQIHNSIVSTLLA 510
G ++L+ +VGE+ER ++ +F+ A+ +QP +IFFDEID L P RS + +V+ LL
Sbjct: 601 GPELLNMYVGESERAVRTVFQRARDSQPCVIFFDEIDALVPKRSHGESSGGARLVNQLLT 660
Query: 511 LMDGLDSRGQVVLIGATNRVDAIDGALRRPGRFDREFNFPLPGCEARAEILDIHTRKWKQ 570
MDG++ R +V LIGATNR D +D A+ RPGR D+ P E R +IL T+ +
Sbjct: 661 EMDGVEGRQKVFLIGATNRPDIVDAAILRPGRLDKILFVDFPSVEDRVDILRKSTKNGTR 720
Query: 571 PP-SRELK-SELAA--SCVGYCGADLKALCTEAAIRAFREKYPQVYTSDDKFLIDVDSVT 626
P ++ E+A G+ GADL AL E+++ A + + V +D+ V V
Sbjct: 721 PMLGEDIDFHEIAQLPELAGFTGADLAALIHESSLLALQAR---VLENDES----VKGVG 773
Query: 627 VEKYHFIEAMSTITPA 642
+ HF EA S I P+
Sbjct: 774 MR--HFREAASRIRPS 787
Score = 208 (78.3 bits), Expect = 1.6e-24, Sum P(2) = 1.6e-24
Identities = 53/167 (31%), Positives = 90/167 (53%)
Query: 353 GIQTAGPS-SKG-GADIQPLQVDES-VSFDDIGGLS-EYIDALKEMVFFPLLYPDFFASY 408
G A P+ +G GA + ES V F+ IGG ++++ + + L P FA+
Sbjct: 177 GASAAPPALPRGLGAVSDTISPRESHVKFEHIGGADRQFLEVCR--LAMHLKRPKTFATL 234
Query: 409 HITPPRGVLLCGPPGTGKTLIARALACAASKAGQKVSFYMRKGADVLSKWVGEAERQLKL 468
+ PPRG ++ GPPG GKT+ A+A+A + + +++S GE E +++
Sbjct: 235 GVDPPRGFIVHGPPGCGKTMFAQAVAGELA-----IPMLQLAATELVSGVSGETEEKIRR 289
Query: 469 LFEEAQRNQPSIIFFDEIDGLAPVRSSKQEQIHNSIVSTLLALMDGL 515
LF+ A++N P I+ D+ID +AP R + Q ++ +VS L + +D L
Sbjct: 290 LFDTAKQNSPCILILDDIDAIAPRRETAQREMERRVVSQLCSSLDEL 336
Score = 162 (62.1 bits), Expect = 1.6e-24, Sum P(2) = 1.6e-24
Identities = 80/310 (25%), Positives = 138/310 (44%)
Query: 484 DEIDGLAPVRSSKQEQIHNSIVSTLLALMDGLDSRGQ-VVLIGATNRVDAIDGALRRPGR 542
DE+ L P ++Q+ ++ + D + G V++IG T+R DA+DG LRR GR
Sbjct: 334 DELV-LPPREKPLKDQLTFGDDGSVAIIGDSPTAAGAGVLVIGTTSRPDAVDGGLRRAGR 392
Query: 543 FDREFNFPLPGCEARAEILDIHTRKWKQPPSRELKSELAASCVGYCGADLKALCTEAAIR 602
F+ E + +P AR +IL+ K LK ++A GY GADL+AL EAA
Sbjct: 393 FENEISLGIPDETAREKILE-KICKVNLAGDVTLK-QIAKLTPGYVGADLQALIREAAKV 450
Query: 603 AFREKYPQVYTSDDKFL-IDVDSVTVEKYHFI---------EAMSTITPAAHRGATVHSR 652
A + + ++ + V+ + E + A+S + R
Sbjct: 451 AIDRVFDTIVVKNEGHKNLTVEQIKEELDRVLAWLQGDDDPSALSELNGGLQISFEDFER 510
Query: 653 PLSLVVAPCLQRHLQKAMNYIS--DIFPPLGMSSEL--TKLCMLSHG---SAIPLVYRPR 705
LS + P +R + +S DI + + +L + L + +A+ + RP+
Sbjct: 511 ALS-TIQPAAKREGFATVPDVSWDDIGALVEVRKQLEWSILYPIKRADDFAALGIDCRPQ 569
Query: 706 -LLLCGSEGTGVDHLGPAILHELEKFPVHSLGLPALLSDPSAKTPEEALVHIFGEARRTT 764
+LLCG G G L A+ +E + G P LL+ ++ E A+ +F AR +
Sbjct: 570 GILLCGPPGCGKTLLAKAVANETGMNFISVKG-PELLNMYVGES-ERAVRTVFQRARDSQ 627
Query: 765 PSILYIPQFN 774
P +++ + +
Sbjct: 628 PCVIFFDEID 637
>TAIR|locus:2036099 [details] [associations]
symbol:RPT5B "26S proteasome AAA-ATPase subunit RPT5B"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0005516 "calmodulin
binding" evidence=ISS] [GO:0010255 "glucose mediated signaling
pathway" evidence=IMP] [GO:0005886 "plasma membrane" evidence=IDA]
[GO:0016020 "membrane" evidence=IDA] [GO:0009553 "embryo sac
development" evidence=IGI] [GO:0009555 "pollen development"
evidence=IGI] [GO:0010498 "proteasomal protein catabolic process"
evidence=IGI;RCA] [GO:0000502 "proteasome complex" evidence=IDA]
[GO:0006094 "gluconeogenesis" evidence=RCA] [GO:0006635 "fatty acid
beta-oxidation" evidence=RCA] [GO:0007010 "cytoskeleton
organization" evidence=RCA] [GO:0009407 "toxin catabolic process"
evidence=RCA] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=RCA] [GO:0043248 "proteasome assembly"
evidence=RCA] [GO:0051788 "response to misfolded protein"
evidence=RCA] [GO:0080129 "proteasome core complex assembly"
evidence=RCA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005886
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0009555
GO:GO:0000502 GO:GO:0017111 GO:GO:0009553 EMBL:AC000106
GO:GO:0010498 GO:GO:0010255 eggNOG:COG1222 TIGRFAMs:TIGR01242
KO:K03065 HOGENOM:HOG000225143 ProtClustDB:CLSN2679225
EMBL:EU980096 EMBL:AY050423 EMBL:AF412095 EMBL:AY124813
IPI:IPI00549144 PIR:C86223 RefSeq:NP_172384.1 UniGene:At.10379
UniGene:At.42241 ProteinModelPortal:O04019 SMR:O04019 IntAct:O04019
STRING:O04019 PaxDb:O04019 PRIDE:O04019 EnsemblPlants:AT1G09100.1
GeneID:837431 KEGG:ath:AT1G09100 GeneFarm:1498 TAIR:At1g09100
InParanoid:O04019 OMA:VEILEMS PhylomeDB:O04019
Genevestigator:O04019 Uniprot:O04019
Length = 423
Score = 406 (148.0 bits), Expect = 7.4e-37, P = 7.4e-37
Identities = 99/264 (37%), Positives = 143/264 (54%)
Query: 367 IQPLQVDESVS--FDDIGGLSEYIDALKEMVFFPLLYPDFFASYHITPPRGVLLCGPPGT 424
++ ++VDE + ++DIGGL + I L E + P+ + + F I PP+GVLL GPPGT
Sbjct: 156 VKAMEVDEKPTEDYNDIGGLEKQIQELVEAIVLPMTHKEQFEKLGIRPPKGVLLYGPPGT 215
Query: 425 GKTLIARALACAASKAGQKVSFYMRKGADVLSKWVGEAERQLKLLFEEAQRNQPSIIFFD 484
GKTL+ARA CAA +F G ++ ++G+ + ++ F A+ P IIF D
Sbjct: 216 GKTLMARA--CAAQT---NATFLKLAGPQLVQMFIGDGAKLVRDAFLLAKEKSPCIIFID 270
Query: 485 EIDGLAPVRSSKQEQIHNSIVSTLLALM---DGLDSRGQVVLIGATNRVDAIDGALRRPG 541
EID + R + + T+L L+ DG S ++ +I ATNR D +D AL R G
Sbjct: 271 EIDAIGTKRFDSEVSGDREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRSG 330
Query: 542 RFDREFNFPLPGCEARAEILDIHTRKWKQPPSRELKSELAASCVGYCGADLKALCTEAAI 601
R DR+ FP P EAR IL IH+RK + ELA S + GA LKA+C EA +
Sbjct: 331 RLDRKIEFPHPTEEARGRILQIHSRKMNVNADVNFE-ELARSTDDFNGAQLKAVCVEAGM 389
Query: 602 RAFREKYPQVYTSD-DKFLIDVDS 624
A R +V D ++ +I V +
Sbjct: 390 LALRRDATEVNHEDFNEGIIQVQA 413
>UNIPROTKB|Q9BVQ7 [details] [associations]
symbol:SPATA5L1 "Spermatogenesis-associated protein 5-like
protein 1" species:9606 "Homo sapiens" [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005737 HSSP:Q01853 eggNOG:COG0464 HOGENOM:HOG000223225
GO:GO:0017111 EMBL:AC025580 HOVERGEN:HBG001226 CTD:79029
OMA:TWEQIGG OrthoDB:EOG42RD70 EMBL:AK022348 EMBL:AK023232
EMBL:AK291457 EMBL:AC090527 EMBL:BC000981 IPI:IPI00031608
IPI:IPI00386906 IPI:IPI00890778 RefSeq:NP_076968.2
UniGene:Hs.369657 ProteinModelPortal:Q9BVQ7 SMR:Q9BVQ7
STRING:Q9BVQ7 PhosphoSite:Q9BVQ7 DMDM:292495038 PaxDb:Q9BVQ7
PRIDE:Q9BVQ7 Ensembl:ENST00000305560 Ensembl:ENST00000531970
Ensembl:ENST00000559860 GeneID:79029 KEGG:hsa:79029 UCSC:uc001zve.3
GeneCards:GC15P045694 H-InvDB:HIX0012209 HGNC:HGNC:28762
HPA:HPA043679 neXtProt:NX_Q9BVQ7 PharmGKB:PA134923477
InParanoid:Q9BVQ7 PhylomeDB:Q9BVQ7 GenomeRNAi:79029 NextBio:67739
Bgee:Q9BVQ7 CleanEx:HS_SPATA5L1 Genevestigator:Q9BVQ7
Uniprot:Q9BVQ7
Length = 753
Score = 416 (151.5 bits), Expect = 8.2e-37, Sum P(2) = 8.2e-37
Identities = 105/269 (39%), Positives = 151/269 (56%)
Query: 381 IGGLSEYIDALKEMVFFPLLYPDFFASYHITPPRGVLLCGPPGTGKTLIARALACAASKA 440
+GGLSE D+L+E++ PL YP + + PRGVLL GPPG GKT + RA+A A
Sbjct: 202 LGGLSEAADSLRELLRLPLRYPRALTALGLAVPRGVLLAGPPGVGKTQLVRAVAREAGAE 261
Query: 441 GQKVSFYMRKGADVLSKWVGEAERQLKLLFEEAQR---NQPSIIFFDEIDGLAPVRSSKQ 497
VS +G+ GE E ++ +F+ A+ PS++F DE+D L P R S+
Sbjct: 262 LLAVSAPALQGSRP-----GETEENVRRVFQRARELASRGPSLLFLDEMDALCPQRGSRA 316
Query: 498 EQIHNSIVSTLLALMDGLDSRGQVVLIGATNRVDAIDGALRRPGRFDREFNFPLPGCEAR 557
+ + +V+ +L L+DG +VV++GATNR DA+D ALRRPGRFDRE P + R
Sbjct: 317 PE--SRVVAQVLTLLDGASGDREVVVVGATNRPDALDPALRRPGRFDREVVIGTPTLKQR 374
Query: 558 AEILDIHTRKWKQPPSRELKSELAASC-VGYCGADLKALCTEAAIRAFREKYPQVYTSDD 616
EIL + T K P S + L A VGY GADL ALC EAA+ A +++ +
Sbjct: 375 KEILQVITSK--MPISSHVDLGLLAEMTVGYVGADLTALCREAAMHAL------LHSEKN 426
Query: 617 KFLIDVDSVTVEKYHFIEAMSTITPAAHR 645
+ D+ +++ F+EA I P++ R
Sbjct: 427 Q-----DNPVIDEIDFLEAFKNIQPSSFR 450
Score = 381 (139.2 bits), Expect = 8.5e-32, P = 8.5e-32
Identities = 99/288 (34%), Positives = 155/288 (53%)
Query: 376 VSFDDIGGLSEYIDALKEMVFFPLLYPDFFASYHITPPRGVLLCGPPGTGKTLIARALAC 435
V +++IGGL + LK+ + +PL +P F +T P+GVLL GPPG KT + RALA
Sbjct: 461 VDWEEIGGLEDVKLKLKQSIEWPLKFPWEFVRMGLTQPKGVLLYGPPGCAKTTLVRALAT 520
Query: 436 AASKAGQKVSFYMRKGADVLSKWVGEAERQLKLLFEEAQRNQPSIIFFDEIDGLAPVRSS 495
+ SF GAD+ S +VG++E+ L +F +A+ + P+I+F DEID + RS+
Sbjct: 521 SCH-----CSFVSVSGADLFSPFVGDSEKVLSQIFRQARASTPAILFLDEIDSILGARSA 575
Query: 496 KQE--QIHNSIVSTLLALMDG-----LDSRGQ--------------VVLIGATNRVDAID 534
+ + ++S LL +DG ++ RG V++I ATNR D +D
Sbjct: 576 SKTGCDVQERVLSVLLNELDGVGLKTIERRGSKSSQQEFQEVFNRSVMIIAATNRPDVLD 635
Query: 535 GALRRPGRFDREFNFPLPGCEARAEILDIHTRKWKQPPSRELKSELAASCVGYCGADLKA 594
AL RPGR D+ P P + R IL + T+ P L++ A +C + GADL+
Sbjct: 636 TALLRPGRLDKIIYIPPPDHKGRLSILKVCTKTMPIGPDVSLENLAAETCF-FSGADLRN 694
Query: 595 LCTEAAIRAFREKYPQVYTSDDKFLIDVDSVTVEKYHFIEAMSTITPA 642
LCTEAA+ A +E +D+ TV++ HF++++ T+ P+
Sbjct: 695 LCTEAALLALQEN-------------GLDATTVKQEHFLKSLKTVKPS 729
Score = 58 (25.5 bits), Expect = 8.2e-37, Sum P(2) = 8.2e-37
Identities = 12/34 (35%), Positives = 20/34 (58%)
Query: 741 LSDPSAKTPEEALVHIFGEARRTTPSILYIPQFN 774
L P E+ L IF +AR +TP+IL++ + +
Sbjct: 534 LFSPFVGDSEKVLSQIFRQARASTPAILFLDEID 567
>ASPGD|ASPL0000010049 [details] [associations]
symbol:AN4236 species:162425 "Emericella nidulans"
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0070682 "proteasome
regulatory particle assembly" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0045899 "positive regulation of RNA polymerase II
transcriptional preinitiation complex assembly" evidence=IEA]
[GO:0005829 "cytosol" evidence=IEA] [GO:0008540 "proteasome
regulatory particle, base subcomplex" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005737 EMBL:BN001302 GO:GO:0030163
GO:GO:0017111 EMBL:AACD01000068 eggNOG:COG1222 TIGRFAMs:TIGR01242
KO:K03065 HOGENOM:HOG000225143 OMA:GALMYGP OrthoDB:EOG40VZZ2
RefSeq:XP_661840.1 ProteinModelPortal:Q5B5E4 STRING:Q5B5E4
EnsemblFungi:CADANIAT00004422 GeneID:2873654 KEGG:ani:AN4236.2
Uniprot:Q5B5E4
Length = 465
Score = 405 (147.6 bits), Expect = 9.5e-37, P = 9.5e-37
Identities = 94/250 (37%), Positives = 142/250 (56%)
Query: 367 IQPLQVDESVS--FDDIGGLSEYIDALKEMVFFPLLYPDFFASYHITPPRGVLLCGPPGT 424
++ ++VDE + + DIGGL + I+ + E + +P+ + F I P+G L+ GPPGT
Sbjct: 197 VKAMEVDEKPTEKYTDIGGLDKQIEEIVEAIVWPMKEAERFKKLGIKAPKGALMYGPPGT 256
Query: 425 GKTLIARALACAASKAGQKVSFYMRKGADVLSKWVGEAERQLKLLFEEAQRNQPSIIFFD 484
GKTL+ARA CAA +F G ++ ++G+ + ++ F A+ PSIIF D
Sbjct: 257 GKTLLARA--CAAET---NATFLKLAGPQLVQMFIGDGAKLVRDCFALAKEKAPSIIFID 311
Query: 485 EIDGLAPVRSSKQEQIHNSIVSTLLALM---DGLDSRGQVVLIGATNRVDAIDGALRRPG 541
E+D + R ++ + T+L L+ DG S ++ ++ ATNRVD +D AL R G
Sbjct: 312 ELDAVGTKRFDSEKSGDREVQRTMLELLNQLDGFASDDRIKVLAATNRVDVLDPALLRSG 371
Query: 542 RFDREFNFPLPGCEARAEILDIHTRKWKQPPSRELKSELAASCVGYCGADLKALCTEAAI 601
R DR+ FPLP EARA IL IH+RK S +ELA S + GA LKA+C EA +
Sbjct: 372 RLDRKIEFPLPNEEARANILQIHSRKMTVEDSVNW-AELARSTDEFGGAQLKAVCVEAGM 430
Query: 602 RAFREKYPQV 611
A R+ + ++
Sbjct: 431 IALRKGHSKI 440
>ASPGD|ASPL0000062283 [details] [associations]
symbol:AN1366 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
EMBL:BN001308 HOGENOM:HOG000223225 GO:GO:0017111 OMA:REGFTTI
EnsemblFungi:CADANIAT00001245 Uniprot:C8VRW3
Length = 729
Score = 423 (154.0 bits), Expect = 1.7e-36, P = 1.7e-36
Identities = 130/420 (30%), Positives = 208/420 (49%)
Query: 376 VSFDDIGGLSEYIDALKEMVFFPLLYPDFFASYHITPPRGVLLCGPPGTGKTLIARALAC 435
VS D+GGL + + L ++V P+ P + + ++ PPRGVLL GPPG GKT+IA A A
Sbjct: 162 VSLADLGGLDDVVQQLGDLVILPMTRPQVYLASNVQPPRGVLLHGPPGCGKTMIANAFA- 220
Query: 436 AASKAGQKVSFYMRKGADVLSKWVGEAERQLKLLFEEAQRNQPSIIFFDEIDGLAPVRSS 495
++ G V F ++S GE+E+ L+ FEEA+R P +IF DEID + P R +
Sbjct: 221 --AELG--VPFISISAPSIVSGMSGESEKALREHFEEAKRLAPCLIFIDEIDAITPKREN 276
Query: 496 KQEQIHNSIVSTLLALMDGL---DSRGQ-VVLIGATNRVDAIDGALRRPGRFDREFNFPL 551
Q ++ IV+ LL MD L + G+ V+++ ATNR D++D ALRR GRFD+E N +
Sbjct: 277 SQREMEKRIVAQLLTCMDDLALEKTDGKPVIVLAATNRPDSLDAALRRGGRFDKEINMTV 336
Query: 552 PGCEARAEILDIHTRKWKQPPSRELKSELAASCVGYCGADLKALCTEAAIRAFREKYPQV 611
P R +IL TRK + + K+ LA G+ GADL L + A A + +Y +
Sbjct: 337 PSEPVREQILRALTRKMRLVDDLDFKT-LAKRTPGFVGADLNDLVSTAGSTAIK-RYLDL 394
Query: 612 YTSDDKFLIDVD-----SVTVEKYHFIEAMSTITPAAHRGATVH-SRPLSLVVAPCLQRH 665
S+ +D++ S +V++ + + TP V S P +Q
Sbjct: 395 LKSNSGEEMDIEGQDDLSPSVKELRRLITHAKETPIGSEAEVVLVSNDDFFTALPKIQPS 454
Query: 666 LQK-AMNYI-----SDIFPPLGMSSELTKLCM--LSHG---SAIPLVYRPRLLLCGSEGT 714
++ I +DI G+ EL + + H +++ + +LL G G
Sbjct: 455 SKREGFATIPDTTWADIGALSGIRDELATAIVDPIKHPELYASVGITAPTGVLLWGPPGC 514
Query: 715 GVDHLGPAILHELEKFPVHSLGLPALLSDPSAKTPEEALVHIFGEARRTTPSILYIPQFN 774
G L A+ +E + G P LL+ ++ E A+ +F AR + P +++ + +
Sbjct: 515 GKTLLAKAVANESRANFISVKG-PELLNKYVGES-ERAVRQVFVRARSSIPCVIFFDELD 572
Score = 397 (144.8 bits), Expect = 1.3e-33, P = 1.3e-33
Identities = 98/268 (36%), Positives = 144/268 (53%)
Query: 341 GHQGDTLAALTSGIQTAGPSSKGGADIQPLQVDESVSFDDIGGLSEYIDALKEMVFFPLL 400
G + + + TA P + + + ++ DIG LS D L + P+
Sbjct: 431 GSEAEVVLVSNDDFFTALPKIQPSSKREGFATIPDTTWADIGALSGIRDELATAIVDPIK 490
Query: 401 YPDFFASYHITPPRGVLLCGPPGTGKTLIARALACAASKAGQKVSFYMRKGADVLSKWVG 460
+P+ +AS IT P GVLL GPPG GKTL+A+A+A S+A +F KG ++L+K+VG
Sbjct: 491 HPELYASVGITAPTGVLLWGPPGCGKTLLAKAVA-NESRA----NFISVKGPELLNKYVG 545
Query: 461 EAERQLKLLFEEAQRNQPSIIFFDEIDGLAPVRSSKQEQIHNSIVSTLLALMDGLDSRGQ 520
E+ER ++ +F A+ + P +IFFDE+D L P R + +V+TLL +DGL S Q
Sbjct: 546 ESERAVRQVFVRARSSIPCVIFFDELDALVPRRDDTLSEASARVVNTLLTELDGLGSSRQ 605
Query: 521 -VVLIGATNRVDAIDGALRRPGRFDREFNFPLPGCEARAEILDIHTRKWKQPPSRELKSE 579
+ +I ATNR D ID A+ RPGR + LP R EIL R+ + +L+
Sbjct: 606 GIYVIAATNRPDIIDPAMLRPGRLETLLFVNLPSPLERVEILQTLVRRLPIEFNEDLR-R 664
Query: 580 LAASCVGYCGADLKALCTEAAIRAFREK 607
LA C G+ GADL +L A A + +
Sbjct: 665 LAEECEGFSGADLTSLLRRAGYNAIKRR 692
>UNIPROTKB|F1MIM8 [details] [associations]
symbol:NVL "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0016235 "aggresome" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005737 GO:GO:0005730 GO:GO:0016235 GO:GO:0017111 OMA:NDMTLKE
GeneTree:ENSGT00570000079239 EMBL:DAAA02042637 EMBL:DAAA02042638
IPI:IPI00715498 Ensembl:ENSBTAT00000047473 Uniprot:F1MIM8
Length = 855
Score = 420 (152.9 bits), Expect = 1.8e-36, Sum P(2) = 1.8e-36
Identities = 111/301 (36%), Positives = 170/301 (56%)
Query: 345 DTLAALTSGIQTAGPSSK--GGADIQPLQVDESVSFDDIGGLSEYIDALKEMVFFPLLYP 402
D + AL+S +Q PS+K G A + P +V++ DIG L + + L + F L P
Sbjct: 554 DFIVALSS-VQ---PSAKREGFATV-P-----NVTWADIGALEDIREELTMAILFLLCNP 603
Query: 403 DFFASYHITPPRGVLLCGPPGTGKTLIARALACAASKAGQKVSFYMRKGADVLSKWVGEA 462
D F + P GVLL GPPG GKTL+A+A+A +++G ++F KG ++L+ +VGE+
Sbjct: 604 DQFRVLGLVTPAGVLLAGPPGCGKTLLAKAVA---NESG--LNFISVKGPELLNMYVGES 658
Query: 463 ERQLKLLFEEAQRNQPSIIFFDEIDGLAPVRSSKQEQIHNSIVSTLLALMDGLDSRGQVV 522
ER ++ +F+ A+ + P +IFFDE+D L P RS+++ +V+ LL MDGL++R QV
Sbjct: 659 ERAVRQVFQRAKNSAPCVIFFDEVDALCPRRSARETGASVRVVNQLLTEMDGLETRQQVF 718
Query: 523 LIGATNRVDAIDGALRRPGRFDREFNFPLPGCEARAEILDIHTRKWKQPP-SRELKSELA 581
++ ATNR D ID A+ RPGR D+ LP R IL T+ +PP ++ E
Sbjct: 719 IMAATNRPDIIDPAILRPGRLDKTLFVGLPPPADRLAILKTITKNGTKPPLDADVNLEAI 778
Query: 582 AS---CVGYCGADLKALCTEAAIRAFREKYPQVYTSDDKFLIDVDSVTVEKYHFIEAMST 638
A C Y GADL AL EA+I A +++ + + +K + + + HF EA
Sbjct: 779 AGDLRCDCYTGADLSALVREASICALKQEMARQKSGSEK-----GELKISQKHFEEAFKK 833
Query: 639 I 639
+
Sbjct: 834 V 834
Score = 388 (141.6 bits), Expect = 8.3e-35, Sum P(3) = 8.3e-35
Identities = 95/237 (40%), Positives = 138/237 (58%)
Query: 370 LQVDESVSFDDIGGLSEYIDALKEMVFFPLLYPDFFASYHITPPRGVLLCGPPGTGKTLI 429
LQ+ SV F+D+GG + + +M+ + +P+ + + PPRGVLL GPPG GKTL+
Sbjct: 256 LQIS-SVKFEDVGGNDTTLKEVCKMLVH-MRHPEVYHHLGVIPPRGVLLHGPPGCGKTLL 313
Query: 430 ARALACAASKAGQKVSFYMRKGADVLSKWVGEAERQLKLLFEEAQRNQPSIIFFDEIDGL 489
A A+A KV+ +++S GE+E++L+ LFE+A + P I+F DEID +
Sbjct: 314 AHAIAGELDLPILKVA-----ATEIVSGVSGESEQKLRELFEQAVSSAPCILFIDEIDAI 368
Query: 490 APVRSSKQEQIHNSIVSTLLALMDGLDS---RGQVVLIGATNRVDAIDGALRRPGRFDRE 546
P R + + IV+ LL MD L++ +V++IGATNR D++D ALRR GRFDRE
Sbjct: 369 TPKREIASKDMERRIVAQLLTCMDDLNNVAATARVLVIGATNRPDSLDPALRRAGRFDRE 428
Query: 547 FNFPLPGCEARAEILDIHTRKWKQPPSRELKSELAASCVGYCGADLKALCTEAAIRA 603
+P +R IL RK + P + + LA G+ GADL ALC EAA+ A
Sbjct: 429 ICLGIPDEASRERILQTLCRKLRLPETFHFR-HLAHLTPGFVGADLMALCREAAMCA 484
Score = 62 (26.9 bits), Expect = 8.3e-35, Sum P(3) = 8.3e-35
Identities = 39/148 (26%), Positives = 65/148 (43%)
Query: 627 VEKYHFIEAMSTITPAAHR-G-ATVHSRPLSLVVAPCLQRHLQKAMNYISDIFPPLGMSS 684
+E FI A+S++ P+A R G ATV + + + A + DI L M+
Sbjct: 550 IELNDFIVALSSVQPSAKREGFATVPNVTWADIGA-------------LEDIREELTMAI 596
Query: 685 ELTKLCMLSHGSAIPLVYRPRLLLCGSEGTGVDHLGPAILHELEKFPVHSLGLPALLSDP 744
L LC + LV +LL G G G L A+ +E + G P LL+
Sbjct: 597 -LFLLCNPDQFRVLGLVTPAGVLLAGPPGCGKTLLAKAVANESGLNFISVKG-PELLNMY 654
Query: 745 SAKTPEEALVHIFGEARRTTPSILYIPQ 772
++ E A+ +F A+ + P +++ +
Sbjct: 655 VGES-ERAVRQVFQRAKNSAPCVIFFDE 681
Score = 54 (24.1 bits), Expect = 1.8e-36, Sum P(2) = 1.8e-36
Identities = 25/96 (26%), Positives = 37/96 (38%)
Query: 80 RRSTRKRRISVNLEDYTDSSGSEDEDLMRPSYRPLRNRMRNNMSQDELSPS-KRKKVVEA 138
RR RI V SS E +DL L R R+ +E + S +E
Sbjct: 49 RRKRNAFRIQVEKVFSIISSEKEHKDLAELEDEHLAKRARHGEEDNEYTESYSDDSSMED 108
Query: 139 KPTPRREGLRPRRSMVATRKQLNLDSGDEQGSSEEK 174
P P+ S+++ ++ NLDS E+K
Sbjct: 109 YPDPQSAN-HMNSSLLSLYRKGNLDSVSSTPEMEQK 143
Score = 42 (19.8 bits), Expect = 3.2e-35, Sum P(2) = 3.2e-35
Identities = 7/29 (24%), Positives = 14/29 (48%)
Query: 157 RKQLNLDSGDEQGSSEEKVGQDETENGNE 185
+K +++ +G EE+ G + T E
Sbjct: 497 KKNPEIEASPSEGDQEERTGAEPTSKTQE 525
>UNIPROTKB|A7YSY2 [details] [associations]
symbol:SPATA5L1 "Spermatogenesis-associated protein 5-like
protein 1" species:9913 "Bos taurus" [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005737 eggNOG:COG0464 HOGENOM:HOG000223225
GeneTree:ENSGT00700000104502 GO:GO:0017111 HOVERGEN:HBG001226
EMBL:BC114696 IPI:IPI00693499 RefSeq:NP_001099095.1
UniGene:Bt.21280 ProteinModelPortal:A7YSY2 PRIDE:A7YSY2
Ensembl:ENSBTAT00000024327 GeneID:533070 KEGG:bta:533070 CTD:79029
InParanoid:A7YSY2 OMA:TWEQIGG OrthoDB:EOG42RD70 NextBio:20875900
Uniprot:A7YSY2
Length = 767
Score = 423 (154.0 bits), Expect = 2.1e-36, P = 2.1e-36
Identities = 104/269 (38%), Positives = 152/269 (56%)
Query: 381 IGGLSEYIDALKEMVFFPLLYPDFFASYHITPPRGVLLCGPPGTGKTLIARALACAASKA 440
+GGLSE D+L+E++ PL YP AS + PRGVLL GPPG GKT + RA+A
Sbjct: 202 LGGLSEAADSLRELLRLPLRYPRALASLGLEVPRGVLLAGPPGVGKTQLVRAVARETGAE 261
Query: 441 GQKVSFYMRKGADVLSKWVGEAERQLKLLFEEAQR---NQPSIIFFDEIDGLAPVRSSKQ 497
VS +GA GE E ++ +F+ A+ +P+++F DE+D L P R
Sbjct: 262 LLAVSAPALQGARP-----GETEENVRRIFKRARELASRRPTLLFLDEVDALCPRRGGPH 316
Query: 498 EQIHNSIVSTLLALMDGLDSRGQVVLIGATNRVDAIDGALRRPGRFDREFNFPLPGCEAR 557
+ + +V+ +L L+DG+ +VV++G+TNR DA+D ALRRPGRFDRE P R
Sbjct: 317 QAPESRVVAQVLTLLDGIGEDREVVVVGSTNRPDALDPALRRPGRFDREVVIGTPTLRQR 376
Query: 558 AEILDIHTRKWKQPPSRELKSELAASC-VGYCGADLKALCTEAAIRAFREKYPQVYTSDD 616
IL + T K P S ++ L A VGY GADL ALC EAA++A +++ +
Sbjct: 377 KAILQVITSK--MPISGQVDLNLLAEMTVGYVGADLTALCREAAMQAL------LHSEKN 428
Query: 617 KFLIDVDSVTVEKYHFIEAMSTITPAAHR 645
+ D+ T+++ F+EA I P++ R
Sbjct: 429 Q-----DNPTIDETDFLEAFKKIQPSSFR 452
Score = 249 (92.7 bits), Expect = 2.2e-17, P = 2.2e-17
Identities = 60/155 (38%), Positives = 91/155 (58%)
Query: 363 GGADIQPLQVDESVSFDDIGGLSEYIDALKEMVFFPLLYPDFFASYHITPPRGVLLCGPP 422
G DI+P V ++ IGGL + LK+ + +PL +P F +T P+GVLL GPP
Sbjct: 456 GVTDIKP------VGWEQIGGLEDVKLKLKQSIEWPLKFPREFVRMGLTQPKGVLLYGPP 509
Query: 423 GTGKTLIARALACAASKAGQKVSFYMRKGADVLSKWVGEAERQLKLLFEEAQRNQPSIIF 482
G KT + RALA + + SF GAD+ S +VG++E+ L +F +A+ N P+I+F
Sbjct: 510 GCAKTTLVRALATSC-----RCSFVSVSGADLFSPFVGDSEKILSQVFRQARANTPAIVF 564
Query: 483 FDEIDGLAPVRS-SKQE-QIHNSIVSTLLALMDGL 515
DEID + RS S+ E + + ++S LL +DG+
Sbjct: 565 LDEIDSILGSRSISRTECNVQDRVLSVLLNELDGV 599
Score = 180 (68.4 bits), Expect = 6.4e-10, P = 6.4e-10
Identities = 56/179 (31%), Positives = 89/179 (49%)
Query: 481 IFFDEIDG--LAPV--RSSKQEQIHNSIVSTLLALMDGLDSR----GQVVLIGATNRVDA 532
+ +E+DG L + R SK +Q H L + L+ + V+++ ATNR D
Sbjct: 591 VLLNELDGVGLKTIERRGSKSDQ-HGKCKQ--LEKNEELEFQEIFNSNVIVVAATNRPDV 647
Query: 533 IDGALRRPGRFDREFNFPLPGCEARAEILDIHTRKWKQPPSRELKSELAASCVGYCGADL 592
+D AL RPGR D+ P P + R IL + T+ P L+ A +C + GADL
Sbjct: 648 LDDALLRPGRLDKIIYIPPPDEKGRLSILKVCTKNTPMGPDVSLEKVAAETCF-FSGADL 706
Query: 593 KALCTEAAIRAFREKYPQVYTSDDKFLIDVDSVTVEKYHFIEAMSTITPA-AHRGATVH 650
LC EAA+ A +E +V TV++ HF+E++ T+ P+ +H+ T++
Sbjct: 707 GNLCKEAALLALQENGLEV-------------TTVKQEHFLESLKTVKPSLSHKDLTLY 752
>SGD|S000006377 [details] [associations]
symbol:VPS4 "AAA-ATPase involved in multivesicular body (MVB)
protein sorting" species:4932 "Saccharomyces cerevisiae"
[GO:0042803 "protein homodimerization activity" evidence=IDA]
[GO:0045053 "protein retention in Golgi apparatus" evidence=IMP]
[GO:0005524 "ATP binding" evidence=IEA;IMP;IDA] [GO:0015031
"protein transport" evidence=IEA] [GO:0016020 "membrane"
evidence=IEA;IDA] [GO:0070676 "intralumenal vesicle formation"
evidence=IMP] [GO:0045324 "late endosome to vacuole transport"
evidence=IMP;IPI] [GO:0016887 "ATPase activity" evidence=IMP;IDA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005768
"endosome" evidence=IEA;IDA] [GO:0006810 "transport" evidence=IEA]
[GO:0010008 "endosome membrane" evidence=IEA] [GO:0032511 "late
endosome to vacuole transport via multivesicular body sorting
pathway" evidence=IMP] [GO:0016125 "sterol metabolic process"
evidence=IGI;IMP] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0005783
"endoplasmic reticulum" evidence=IDA] [GO:0051260 "protein
homooligomerization" evidence=IDA] InterPro:IPR007330
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 SGD:S000006377
GO:GO:0005783 GO:GO:0005524 GO:GO:0042803 GO:GO:0016020
GO:GO:0015031 GO:GO:0005768 GO:GO:0051260 GO:GO:0016887
GO:GO:0010008 EMBL:BK006949 Pfam:PF04212 eggNOG:COG0464
InterPro:IPR015415 Pfam:PF09336 GO:GO:0016125 EMBL:U25842
SMART:SM00745 GO:GO:0032511 GO:GO:0045053 PDB:2V6X PDBsum:2V6X
GO:GO:0070676 GeneTree:ENSGT00550000074466 HOGENOM:HOG000225146
KO:K12196 OMA:AKCAEYL OrthoDB:EOG4V1B8K EMBL:X92680 PIR:S59831
RefSeq:NP_015499.1 PDB:2QP9 PDB:2QPA PDB:2RKO PDB:3EIE PDB:3EIH
PDB:3MHV PDBsum:2QP9 PDBsum:2QPA PDBsum:2RKO PDBsum:3EIE
PDBsum:3EIH PDBsum:3MHV ProteinModelPortal:P52917 SMR:P52917
DIP:DIP-1746N IntAct:P52917 MINT:MINT-389240 STRING:P52917
PaxDb:P52917 PeptideAtlas:P52917 EnsemblFungi:YPR173C GeneID:856303
KEGG:sce:YPR173C CYGD:YPR173c EvolutionaryTrace:P52917
NextBio:981664 Genevestigator:P52917 GermOnline:YPR173C
Uniprot:P52917
Length = 437
Score = 376 (137.4 bits), Expect = 2.3e-36, Sum P(2) = 2.3e-36
Identities = 98/292 (33%), Positives = 153/292 (52%)
Query: 336 AASGWGHQGDTLAALTSGIQTAGPSSK---GGADIQPLQVDESVSFDDIGGLSEYIDALK 392
A SG + G+ + G G +K G L +V ++D+ GL +ALK
Sbjct: 88 AGSG-SNGGNKKISQEEGEDNGGEDNKKLRGALSSAILSEKPNVKWEDVAGLEGAKEALK 146
Query: 393 EMVFFPLLYPDFFASYHITPPRGVLLCGPPGTGKTLIARALACAASKAGQKVSFYMRKGA 452
E V P+ +P F P G+LL GPPGTGK+ +A+A+A A+ +F+ +
Sbjct: 147 EAVILPVKFPHLFKGNR-KPTSGILLYGPPGTGKSYLAKAVATEANS-----TFFSVSSS 200
Query: 453 DVLSKWVGEAERQLKLLFEEAQRNQPSIIFFDEIDGLAPVRSSKQEQIHNSIVSTLLALM 512
D++SKW+GE+E+ +K LF A+ N+PSIIF DE+D L R + + I + LL M
Sbjct: 201 DLVSKWMGESEKLVKQLFAMARENKPSIIFIDEVDALTGTRGEGESEASRRIKTELLVQM 260
Query: 513 DGL--DSRGQVVLIGATNRVDAIDGALRRPGRFDREFNFPLPGCEARAEILDIHTRKWKQ 570
+G+ DS+G V+++GATN +D A+RR RF+R PLP AR + +I+
Sbjct: 261 NGVGNDSQG-VLVLGATNIPWQLDSAIRR--RFERRIYIPLPDLAARTTMFEINVGDTPC 317
Query: 571 PPSRELKSELAASCVGYCGADLKALCTEAAIRAFRE-----KYPQVYTSDDK 617
++E L A GY G+D+ + +A ++ R+ + V T DD+
Sbjct: 318 VLTKEDYRTLGAMTEGYSGSDIAVVVKDALMQPIRKIQSATHFKDVSTEDDE 369
Score = 52 (23.4 bits), Expect = 2.3e-36, Sum P(2) = 2.3e-36
Identities = 19/67 (28%), Positives = 30/67 (44%)
Query: 126 ELSPSKRKKVVEAKPTP---RREGLRPR-RSMVATRKQLNLDSGDEQGSSEEKVGQDETE 181
E +P K K ++ AK T R E L+ S A + + +G +K+ Q+E E
Sbjct: 47 EKNP-KSKDLIRAKFTEYLNRAEQLKKHLESEEANAAKKSPSAGSGSNGGNKKISQEEGE 105
Query: 182 NGNESDN 188
+ DN
Sbjct: 106 DNGGEDN 112
>UNIPROTKB|H0Y8B6 [details] [associations]
symbol:NVL "Nuclear valosin-containing protein-like"
species:9606 "Homo sapiens" [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005730 "nucleolus"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0016235
"aggresome" evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005737 GO:GO:0005730 GO:GO:0016235
GO:GO:0017111 EMBL:AC092809 HGNC:HGNC:8070 ChiTaRS:NVL
Ensembl:ENST00000469968 Uniprot:H0Y8B6
Length = 739
Score = 422 (153.6 bits), Expect = 2.6e-36, Sum P(2) = 2.6e-36
Identities = 101/269 (37%), Positives = 154/269 (57%)
Query: 375 SVSFDDIGGLSEYIDALKEMVFFPLLYPDFFASYHITPPRGVLLCGPPGTGKTLIARALA 434
+V++ DIG L + + L + P+ PD F + + P GVLL GPPG GKTL+A+A+A
Sbjct: 460 NVTWADIGALEDIREELTMAILAPVRNPDQFKALGLVTPAGVLLAGPPGCGKTLLAKAVA 519
Query: 435 CAASKAGQKVSFYMRKGADVLSKWVGEAERQLKLLFEEAQRNQPSIIFFDEIDGLAPVRS 494
+++G ++F KG ++L+ +VGE+ER ++ +F+ A+ + P +IFFDE+D L P RS
Sbjct: 520 ---NESG--LNFISVKGPELLNMYVGESERAVRQVFQRAKNSAPCVIFFDEVDALCPRRS 574
Query: 495 SKQEQIHNSIVSTLLALMDGLDSRGQVVLIGATNRVDAIDGALRRPGRFDREFNFPLPGC 554
++ +V+ LL MDGL++R QV ++ ATNR D ID A+ RPGR D+ LP
Sbjct: 575 DRETGASVRVVNQLLTEMDGLEARQQVFIMAATNRPDIIDPAILRPGRLDKTLFVGLPPP 634
Query: 555 EARAEILDIHTRKWKQPP-SRELKSELAAS---CVGYCGADLKALCTEAAIRAFREKYPQ 610
R IL T+ +PP ++ E A C Y GADL AL EA+I A R++ +
Sbjct: 635 ADRLAILKTITKNGTKPPLDADVNLEAIAGDLRCDCYTGADLSALVREASICALRQEMAR 694
Query: 611 VYTSDDKFLIDVDSVTVEKYHFIEAMSTI 639
+ ++K + V HF EA +
Sbjct: 695 QKSGNEK-----GELKVSHKHFEEAFKKV 718
Score = 388 (141.6 bits), Expect = 4.1e-34, Sum P(3) = 4.1e-34
Identities = 94/232 (40%), Positives = 135/232 (58%)
Query: 375 SVSFDDIGGLSEYIDALKEMVFFPLLYPDFFASYHITPPRGVLLCGPPGTGKTLIARALA 434
+V F+D+GG + + +M+ + +P+ + + PPRGVLL GPPG GKTL+A A+A
Sbjct: 144 NVKFEDVGGNDMTLKEVCKMLIH-MRHPEVYHHLGVVPPRGVLLHGPPGCGKTLLAHAIA 202
Query: 435 CAASKAGQKVSFYMRKGADVLSKWVGEAERQLKLLFEEAQRNQPSIIFFDEIDGLAPVRS 494
KV+ +++S GE+E++L+ LFE+A N P IIF DEID + P R
Sbjct: 203 GELDLPILKVA-----APEIVSGVSGESEQKLRELFEQAVSNAPCIIFIDEIDAITPKRE 257
Query: 495 SKQEQIHNSIVSTLLALMDGLDS---RGQVVLIGATNRVDAIDGALRRPGRFDREFNFPL 551
+ + IV+ LL MD L++ +V++IGATNR D++D ALRR GRFDRE +
Sbjct: 258 VASKDMERRIVAQLLTCMDDLNNVAATARVLVIGATNRPDSLDPALRRAGRFDREICLGI 317
Query: 552 PGCEARAEILDIHTRKWKQPPSRELKSELAASCVGYCGADLKALCTEAAIRA 603
P +R IL RK + P + + LA G+ GADL ALC EAA+ A
Sbjct: 318 PDEASRERILQTLCRKLRLPQAFDF-CHLAHLTPGFVGADLMALCREAAMCA 368
Score = 58 (25.5 bits), Expect = 4.1e-34, Sum P(3) = 4.1e-34
Identities = 35/151 (23%), Positives = 63/151 (41%)
Query: 622 VDSVTVEKYHFIEAMSTITPAAHRGATVHSRPLSLVVAPCLQRHLQKAMNYISDIFPPLG 681
+ + +E FI A+S++ P+A R V P + + + DI L
Sbjct: 429 MQGLCIELNDFIVALSSVQPSAKREG--------FVTVPNVT---WADIGALEDIREELT 477
Query: 682 MSSELTKLCMLSHGSAIPLVYRPRLLLCGSEGTGVDHLGPAILHELEKFPVHSLGLPALL 741
M+ L + A+ LV +LL G G G L A+ +E + G P LL
Sbjct: 478 MAI-LAPVRNPDQFKALGLVTPAGVLLAGPPGCGKTLLAKAVANESGLNFISVKG-PELL 535
Query: 742 SDPSAKTPEEALVHIFGEARRTTPSILYIPQ 772
+ ++ E A+ +F A+ + P +++ +
Sbjct: 536 NMYVGES-ERAVRQVFQRAKNSAPCVIFFDE 565
Score = 46 (21.3 bits), Expect = 2.6e-36, Sum P(2) = 2.6e-36
Identities = 9/34 (26%), Positives = 19/34 (55%)
Query: 91 NLEDYTDSSGSEDEDLMRPSYRPLRNRMRNNMSQ 124
++EDY D S+D L+ + + +++N S+
Sbjct: 80 SMEDYPDPQDSKDSSLLESDMKR-KGKLKNKGSK 112
>UNIPROTKB|O15381 [details] [associations]
symbol:NVL "Nuclear valosin-containing protein-like"
species:9606 "Homo sapiens" [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005730 "nucleolus"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0016235
"aggresome" evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005737 GO:GO:0005730 GO:GO:0016235
eggNOG:COG0464 HOGENOM:HOG000223225 GO:GO:0017111 KO:K14571
EMBL:U68140 EMBL:U78772 EMBL:AK297396 EMBL:AK298244 EMBL:AC092809
EMBL:BC012105 IPI:IPI00006197 IPI:IPI00183080 IPI:IPI00185801
RefSeq:NP_001230075.1 RefSeq:NP_001230076.1 RefSeq:NP_002524.2
RefSeq:NP_996671.1 UniGene:Hs.497867 PDB:2X8A PDBsum:2X8A
ProteinModelPortal:O15381 SMR:O15381 IntAct:O15381
MINT:MINT-1423251 STRING:O15381 PhosphoSite:O15381
SWISS-2DPAGE:O15381 PaxDb:O15381 PRIDE:O15381 DNASU:4931
Ensembl:ENST00000281701 Ensembl:ENST00000340871
Ensembl:ENST00000391875 Ensembl:ENST00000469075 GeneID:4931
KEGG:hsa:4931 UCSC:uc001hok.3 CTD:4931 GeneCards:GC01M224416
HGNC:HGNC:8070 HPA:HPA028207 MIM:602426 neXtProt:NX_O15381
PharmGKB:PA31857 HOVERGEN:HBG001226 InParanoid:O15381 OMA:NDMTLKE
OrthoDB:EOG4ZPDTN PhylomeDB:O15381 ChiTaRS:NVL
EvolutionaryTrace:O15381 GenomeRNAi:4931 NextBio:19001
ArrayExpress:O15381 Bgee:O15381 CleanEx:HS_NVL
Genevestigator:O15381 GermOnline:ENSG00000143748 Uniprot:O15381
Length = 856
Score = 422 (153.6 bits), Expect = 4.0e-36, P = 4.0e-36
Identities = 101/269 (37%), Positives = 154/269 (57%)
Query: 375 SVSFDDIGGLSEYIDALKEMVFFPLLYPDFFASYHITPPRGVLLCGPPGTGKTLIARALA 434
+V++ DIG L + + L + P+ PD F + + P GVLL GPPG GKTL+A+A+A
Sbjct: 577 NVTWADIGALEDIREELTMAILAPVRNPDQFKALGLVTPAGVLLAGPPGCGKTLLAKAVA 636
Query: 435 CAASKAGQKVSFYMRKGADVLSKWVGEAERQLKLLFEEAQRNQPSIIFFDEIDGLAPVRS 494
+++G ++F KG ++L+ +VGE+ER ++ +F+ A+ + P +IFFDE+D L P RS
Sbjct: 637 ---NESG--LNFISVKGPELLNMYVGESERAVRQVFQRAKNSAPCVIFFDEVDALCPRRS 691
Query: 495 SKQEQIHNSIVSTLLALMDGLDSRGQVVLIGATNRVDAIDGALRRPGRFDREFNFPLPGC 554
++ +V+ LL MDGL++R QV ++ ATNR D ID A+ RPGR D+ LP
Sbjct: 692 DRETGASVRVVNQLLTEMDGLEARQQVFIMAATNRPDIIDPAILRPGRLDKTLFVGLPPP 751
Query: 555 EARAEILDIHTRKWKQPP-SRELKSELAAS---CVGYCGADLKALCTEAAIRAFREKYPQ 610
R IL T+ +PP ++ E A C Y GADL AL EA+I A R++ +
Sbjct: 752 ADRLAILKTITKNGTKPPLDADVNLEAIAGDLRCDCYTGADLSALVREASICALRQEMAR 811
Query: 611 VYTSDDKFLIDVDSVTVEKYHFIEAMSTI 639
+ ++K + V HF EA +
Sbjct: 812 QKSGNEK-----GELKVSHKHFEEAFKKV 835
Score = 388 (141.6 bits), Expect = 2.6e-33, Sum P(2) = 2.6e-33
Identities = 94/232 (40%), Positives = 135/232 (58%)
Query: 375 SVSFDDIGGLSEYIDALKEMVFFPLLYPDFFASYHITPPRGVLLCGPPGTGKTLIARALA 434
+V F+D+GG + + +M+ + +P+ + + PPRGVLL GPPG GKTL+A A+A
Sbjct: 261 NVKFEDVGGNDMTLKEVCKMLIH-MRHPEVYHHLGVVPPRGVLLHGPPGCGKTLLAHAIA 319
Query: 435 CAASKAGQKVSFYMRKGADVLSKWVGEAERQLKLLFEEAQRNQPSIIFFDEIDGLAPVRS 494
KV+ +++S GE+E++L+ LFE+A N P IIF DEID + P R
Sbjct: 320 GELDLPILKVA-----APEIVSGVSGESEQKLRELFEQAVSNAPCIIFIDEIDAITPKRE 374
Query: 495 SKQEQIHNSIVSTLLALMDGLDS---RGQVVLIGATNRVDAIDGALRRPGRFDREFNFPL 551
+ + IV+ LL MD L++ +V++IGATNR D++D ALRR GRFDRE +
Sbjct: 375 VASKDMERRIVAQLLTCMDDLNNVAATARVLVIGATNRPDSLDPALRRAGRFDREICLGI 434
Query: 552 PGCEARAEILDIHTRKWKQPPSRELKSELAASCVGYCGADLKALCTEAAIRA 603
P +R IL RK + P + + LA G+ GADL ALC EAA+ A
Sbjct: 435 PDEASRERILQTLCRKLRLPQAFDF-CHLAHLTPGFVGADLMALCREAAMCA 485
Score = 58 (25.5 bits), Expect = 2.6e-33, Sum P(2) = 2.6e-33
Identities = 35/151 (23%), Positives = 63/151 (41%)
Query: 622 VDSVTVEKYHFIEAMSTITPAAHRGATVHSRPLSLVVAPCLQRHLQKAMNYISDIFPPLG 681
+ + +E FI A+S++ P+A R V P + + + DI L
Sbjct: 546 MQGLCIELNDFIVALSSVQPSAKREG--------FVTVPNVT---WADIGALEDIREELT 594
Query: 682 MSSELTKLCMLSHGSAIPLVYRPRLLLCGSEGTGVDHLGPAILHELEKFPVHSLGLPALL 741
M+ L + A+ LV +LL G G G L A+ +E + G P LL
Sbjct: 595 MAI-LAPVRNPDQFKALGLVTPAGVLLAGPPGCGKTLLAKAVANESGLNFISVKG-PELL 652
Query: 742 SDPSAKTPEEALVHIFGEARRTTPSILYIPQ 772
+ ++ E A+ +F A+ + P +++ +
Sbjct: 653 NMYVGES-ERAVRQVFQRAKNSAPCVIFFDE 682
>SGD|S000003260 [details] [associations]
symbol:MSP1 "Mitochondrial protein involved in mitochondrial
protein sorting" species:4932 "Saccharomyces cerevisiae"
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0005741
"mitochondrial outer membrane" evidence=IEA;IDA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA;IDA]
[GO:0016020 "membrane" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0006626 "protein targeting to
mitochondrion" evidence=IGI] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
SGD:S000003260 GO:GO:0016021 GO:GO:0005524 GO:GO:0006626
EMBL:BK006941 GO:GO:0005741 GO:GO:0016887 eggNOG:COG0464
HOGENOM:HOG000225141 GeneTree:ENSGT00550000074823 KO:K00706
EMBL:X60722 EMBL:X68055 EMBL:Z72813 RefSeq:NP_011546.3
GeneID:852920 KEGG:sce:YGR032W EMBL:X81069 EMBL:AY557772 PIR:A49506
RefSeq:NP_011542.3 ProteinModelPortal:P28737 SMR:P28737
DIP:DIP-8029N IntAct:P28737 MINT:MINT-4486830 STRING:P28737
PaxDb:P28737 PeptideAtlas:P28737 EnsemblFungi:YGR028W GeneID:852915
KEGG:sce:YGR028W CYGD:YGR028w OMA:VINPLHI OrthoDB:EOG4BVW3J
NextBio:972614 Genevestigator:P28737 GermOnline:YGR028W
Uniprot:P28737
Length = 362
Score = 399 (145.5 bits), Expect = 4.2e-36, P = 4.2e-36
Identities = 104/287 (36%), Positives = 157/287 (54%)
Query: 373 DE-SVSFDDIGGLSEYIDALKEMVFFPLLYPDFFA-SYHITPPRGVLLCGPPGTGKTLIA 430
DE +++F DIGGL I L E V +PL+ P+ ++ S + P GVLL GPPG GKT++A
Sbjct: 84 DEINITFQDIGGLDPLISDLHESVIYPLMMPEVYSNSPLLQAPSGVLLYGPPGCGKTMLA 143
Query: 431 RALACAASKAGQKVSFYMRKGADVLSKWVGEAERQLKLLFEEAQRNQPSIIFFDEIDGLA 490
+ALA ++G +F + + ++ KW GE+ + + +F A + QP IIF DEID
Sbjct: 144 KALA---KESG--ANFISIRMSSIMDKWYGESNKIVDAMFSLANKLQPCIIFIDEIDSFL 198
Query: 491 PVRSSKQEQIHNSIVSTLLALMDGLDSRGQVVLIGATNRVDAIDGALRRPGRFDREFNFP 550
RSS ++ ++ + + L DGL + G+V++IGATNR++ ID A R R + F
Sbjct: 199 RERSSTDHEVTATLKAEFMTLWDGLLNNGRVMIIGATNRINDIDDAFLR--RLPKRFLVS 256
Query: 551 LPGCEARAEILDIHTRKWKQPPSRELKSELAA-SCVGYCGADLKALCTEAAIRAFREKYP 609
LPG + R +IL + + K E +L A + G+ G+DLK LC EAA+ A +E
Sbjct: 257 LPGSDQRYKILSVLLKDTKLDED-EFDLQLIADNTKGFSGSDLKELCREAALDAAKEYIK 315
Query: 610 QVYTSDDKFLIDVDSVTVEKYHFIEAMSTITPAAHRGAT--VHSRPL 654
Q D IDV+ + K ++ T AT + S+PL
Sbjct: 316 QKRQLIDSGTIDVNDTSSLKIRPLKTKD-FTKKLRMDATSTLSSQPL 361
>DICTYBASE|DDB_G0293388 [details] [associations]
symbol:DDB_G0293388 "ATP-dependent metalloprotease"
species:44689 "Dictyostelium discoideum" [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0006508 "proteolysis" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0004222
"metalloendopeptidase activity" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0008237 "metallopeptidase
activity" evidence=IEA] [GO:0008233 "peptidase activity"
evidence=IEA] HAMAP:MF_01458 InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
Pfam:PF00004 Pfam:PF01434 PROSITE:PS00674 SMART:SM00382
dictyBase:DDB_G0293388 GO:GO:0016021 GO:GO:0005886 GO:GO:0005524
GO:GO:0046872 GO:GO:0006508 GO:GO:0004222 GO:GO:0030163
eggNOG:COG0465 GO:GO:0017111 TIGRFAMs:TIGR01241 EMBL:AAFI02000204
RefSeq:XP_629167.2 ProteinModelPortal:Q54BW7 STRING:Q54BW7
MEROPS:M41.A16 EnsemblProtists:DDB0304811 GeneID:8629188
KEGG:ddi:DDB_G0293388 InParanoid:Q54BW7 OMA:ICLAGRA Uniprot:Q54BW7
Length = 767
Score = 419 (152.6 bits), Expect = 5.9e-36, P = 5.9e-36
Identities = 103/260 (39%), Positives = 152/260 (58%)
Query: 349 ALTSGIQTAGPSSKGGADIQPLQVDES----VSFDDIGGLSEYIDALKEMVFFPLLYPDF 404
+LTS T ++ + DE+ SFDD+ G+ E + L+E+V + LL+P
Sbjct: 266 SLTSETSTVKEANGNKPQYFAKEYDETNQTPTSFDDVKGIQEVKEELEEIVDY-LLHPTK 324
Query: 405 FASYHITPPRGVLLCGPPGTGKTLIARALACAASKAGQKVSFYMRKGADVLSKWVGEAER 464
+ S P+GVLL G PGTGKTL+ARA+A +AG VSF G+ K+VG R
Sbjct: 325 YNSIGAKLPKGVLLSGEPGTGKTLLARAIA---GEAG--VSFLYTTGSSFDEKYVGVGSR 379
Query: 465 QLKLLFEEAQRNQPSIIFFDEIDGLAPVRSSKQEQIHNSIVSTLLALMDGLDSRGQVVLI 524
+++ LF A+ QP IIF DEID + R++ HN + LL MDG + Q+++I
Sbjct: 380 RVRELFNAAREKQPCIIFIDEIDAVGKSRNTAH---HNETLLQLLTEMDGFEGNSQIMII 436
Query: 525 GATNRVDAIDGALRRPGRFDREFNFPLPGCEARAEILDIHTRKWKQPPSRELKSE-LAAS 583
GATN +++D AL RPGRFDR + P+P + R+EI+D + +K K + E+K++ +A +
Sbjct: 437 GATNAPNSLDPALLRPGRFDRHISVPIPDMKGRSEIIDHYLKKVKH--TVEVKADTIARA 494
Query: 584 CVGYCGADLKALCTEAAIRA 603
G+ GADL L AAI+A
Sbjct: 495 TPGFTGADLSNLINTAAIKA 514
>MGI|MGI:1914709 [details] [associations]
symbol:Nvl "nuclear VCP-like" species:10090 "Mus musculus"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0008150 "biological_process" evidence=ND] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 MGI:MGI:1914709
GO:GO:0005524 GO:GO:0005737 GO:GO:0005730 GO:GO:0016235
eggNOG:COG0464 HOGENOM:HOG000223225 GO:GO:0017111 KO:K14571
CTD:4931 HOVERGEN:HBG001226 OMA:NDMTLKE OrthoDB:EOG4ZPDTN
EMBL:AK004676 EMBL:AK054502 EMBL:AK140509 EMBL:BC031847
IPI:IPI00321884 RefSeq:NP_080447.1 UniGene:Mm.263464 PDB:2RRE
PDBsum:2RRE ProteinModelPortal:Q9DBY8 SMR:Q9DBY8 STRING:Q9DBY8
PhosphoSite:Q9DBY8 PaxDb:Q9DBY8 PRIDE:Q9DBY8
Ensembl:ENSMUST00000027797 GeneID:67459 KEGG:mmu:67459
UCSC:uc007dxb.1 GeneTree:ENSGT00570000079239 InParanoid:Q9DBY8
EvolutionaryTrace:Q9DBY8 NextBio:324638 Bgee:Q9DBY8 CleanEx:MM_NVL
Genevestigator:Q9DBY8 GermOnline:ENSMUSG00000026516 Uniprot:Q9DBY8
Length = 855
Score = 420 (152.9 bits), Expect = 6.0e-36, Sum P(2) = 6.0e-36
Identities = 100/272 (36%), Positives = 155/272 (56%)
Query: 375 SVSFDDIGGLSEYIDALKEMVFFPLLYPDFFASYHITPPRGVLLCGPPGTGKTLIARALA 434
+V++ DIG L + D L + P+ PD F + + P G+LL GPPG GKTL+A+A+A
Sbjct: 576 NVTWADIGALEDIRDELIMAILAPVRNPDQFRTLGLGTPAGILLAGPPGCGKTLLAKAVA 635
Query: 435 CAASKAGQKVSFYMRKGADVLSKWVGEAERQLKLLFEEAQRNQPSIIFFDEIDGLAPVRS 494
+++G ++F KG ++L+ +VGE+ER ++ +F+ A+ + P +IFFDE+D L P RS
Sbjct: 636 ---NESG--LNFISVKGPELLNMYVGESERAVRQVFQRAKNSAPCVIFFDEVDALCPRRS 690
Query: 495 SKQEQIHNSIVSTLLALMDGLDSRGQVVLIGATNRVDAIDGALRRPGRFDREFNFPLPGC 554
++ +V+ LL MDGL++R QV ++ ATNR D ID A+ RPGR D+ LP
Sbjct: 691 DRETGASVRVVNQLLTEMDGLETRQQVFILAATNRPDIIDPAILRPGRLDKTLFVGLPPP 750
Query: 555 EARAEILDIHTRKWKQPP-SRELKSELAAS---CVGYCGADLKALCTEAAIRAFREKYPQ 610
R IL T+ +PP ++ E A+ C Y GADL AL EA++ A R++
Sbjct: 751 ADRVAILKTITKNGTKPPLDEDVNLETIANDLRCNCYTGADLTALVREASLCALRQEI-- 808
Query: 611 VYTSDDKFLIDVDSVTVEKYHFIEAMSTITPA 642
+ K + + V HF +A + P+
Sbjct: 809 ---TAQKNGVGAGELKVSHKHFEDAFKKVKPS 837
Score = 390 (142.3 bits), Expect = 1.8e-33, Sum P(3) = 1.8e-33
Identities = 97/245 (39%), Positives = 139/245 (56%)
Query: 362 KGGADIQPLQVDESVSFDDIGGLSEYIDALKEMVFFPLLYPDFFASYHITPPRGVLLCGP 421
K A LQ+ +V F+D+GG + + +M+ + +P+ + + PPRGVLL GP
Sbjct: 248 KAKARSTELQIS-NVKFEDVGGNDATLKEVCKMLIH-MRHPEVYQHLGVVPPRGVLLHGP 305
Query: 422 PGTGKTLIARALACAASKAGQKVSFYMRKGADVLSKWVGEAERQLKLLFEEAQRNQPSII 481
PG GKTL+A A+A KV+ +++S GE+E++L+ LF++A N P I+
Sbjct: 306 PGCGKTLLAHAIAGELDLPILKVA-----APEIVSGVSGESEQKLRELFDQAVSNAPCIV 360
Query: 482 FFDEIDGLAPVRSSKQEQIHNSIVSTLLALMDGLDS---RGQVVLIGATNRVDAIDGALR 538
F DEID + P R + + IV+ LL MD L++ +V++IGATNR D++D ALR
Sbjct: 361 FIDEIDAITPKREVASKDMERRIVAQLLTCMDDLNNVAATARVLVIGATNRPDSLDPALR 420
Query: 539 RPGRFDREFNFPLPGCEARAEILDIHTRKWKQPPSRELKSELAASCVGYCGADLKALCTE 598
R GRFDRE +P AR IL RK + P + LA G+ GADL ALC E
Sbjct: 421 RAGRFDREVCLGIPDEAARERILQTLCRKLRLPETFNF-CHLAHLTPGFVGADLMALCRE 479
Query: 599 AAIRA 603
AA+ A
Sbjct: 480 AAMCA 484
Score = 52 (23.4 bits), Expect = 1.8e-33, Sum P(3) = 1.8e-33
Identities = 17/67 (25%), Positives = 32/67 (47%)
Query: 706 LLLCGSEGTGVDHLGPAILHELEKFPVHSLGLPALLSDPSAKTPEEALVHIFGEARRTTP 765
+LL G G G L A+ +E + G P LL+ ++ E A+ +F A+ + P
Sbjct: 617 ILLAGPPGCGKTLLAKAVANESGLNFISVKG-PELLNMYVGES-ERAVRQVFQRAKNSAP 674
Query: 766 SILYIPQ 772
+++ +
Sbjct: 675 CVIFFDE 681
Score = 49 (22.3 bits), Expect = 6.0e-36, Sum P(2) = 6.0e-36
Identities = 14/45 (31%), Positives = 23/45 (51%)
Query: 152 SMVATRKQLNLDSGDEQGSSEEKVGQDETENGNESDNDADDGQNE 196
S++++ K+L E G ++ QDE + ES +D DD E
Sbjct: 64 SIISSEKELKNLKELEDGHLAKRARQDEEDEYTESYSD-DDSNME 107
>TAIR|locus:2138146 [details] [associations]
symbol:FtsHi1 "FTSH inactive protease 1" species:3702
"Arabidopsis thaliana" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0004222 "metalloendopeptidase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005886
"plasma membrane" evidence=ISM] [GO:0008237 "metallopeptidase
activity" evidence=ISS] [GO:0009658 "chloroplast organization"
evidence=IMP] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0009507 "chloroplast" evidence=IDA] [GO:0009941 "chloroplast
envelope" evidence=IDA] [GO:0007020 "microtubule nucleation"
evidence=RCA] [GO:0010020 "chloroplast fission" evidence=IMP]
[GO:0009536 "plastid" evidence=IDA] InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 Pfam:PF00004 Pfam:PF01434
SMART:SM00382 GO:GO:0005524 EMBL:CP002687 GenomeReviews:CT486007_GR
GO:GO:0051301 GO:GO:0006508 GO:GO:0009941 GO:GO:0004222
eggNOG:COG0465 GO:GO:0017111 GO:GO:0010020 EMBL:AC002343
EMBL:AL078468 EMBL:AL161560 HSSP:Q9LCZ4 IPI:IPI00537043 PIR:T08913
RefSeq:NP_567691.1 UniGene:At.3392 ProteinModelPortal:O22993
SMR:O22993 PaxDb:O22993 PRIDE:O22993 EnsemblPlants:AT4G23940.1
GeneID:828494 KEGG:ath:AT4G23940 TAIR:At4g23940
HOGENOM:HOG000029491 InParanoid:O22993 OMA:QMAGSEF PhylomeDB:O22993
ProtClustDB:CLSN2689578 ArrayExpress:O22993 Genevestigator:O22993
Uniprot:O22993
Length = 946
Score = 421 (153.3 bits), Expect = 6.7e-36, P = 6.7e-36
Identities = 110/271 (40%), Positives = 155/271 (57%)
Query: 371 QVDES--VSFDDIGGLSEYIDALKEMVFFPLLYPDFFASYHITPPRGVLLCGPPGTGKTL 428
+VD S V F D+ G+ E +D L+E+V + L PD F I PP GVLL GPPG GKTL
Sbjct: 420 RVDGSTGVKFADVAGIDEAVDELQELVKY-LKNPDLFDKMGIKPPHGVLLEGPPGCGKTL 478
Query: 429 IARALACAASKAGQKVSFYMRKGADVLSKWVGEAERQLKLLFEEAQRNQPSIIFFDEIDG 488
+A+A+A +AG V FY G++ + VG +++ LF+ A+ N+PS+IF DEID
Sbjct: 479 VAKAIA---GEAG--VPFYQMAGSEFVEVLVGVGSARIRDLFKRAKVNKPSVIFIDEIDA 533
Query: 489 LAPVRSS----KQEQIHNSI-------VSTLLALMDGLDSRGQVVLIGATNRVDAIDGAL 537
LA R +Q++N+ ++ LL +DG D+ V+ +GATNR D +D AL
Sbjct: 534 LATRRQGIFKENSDQLYNAATQERETTLNQLLIELDGFDTGKGVIFLGATNRRDLLDPAL 593
Query: 538 RRPGRFDREFNFPLPGCEARAEILDIHTRKWKQPPSRELKSELAASCVGYCGADLKALCT 597
RPGRFDR+ P + R +IL IH K K S +L S A++ G+ GA L L
Sbjct: 594 LRPGRFDRKIRVRPPNAKGRLDILKIHASKVKMSDSVDLSS-YASNLPGWSGAKLAQLVQ 652
Query: 598 EAAIRAFREKYPQVYTSDDKFLID-VDSVTV 627
EAA+ A R+ + + SD + D VD +TV
Sbjct: 653 EAALVAVRKTHNSILQSD---MDDAVDRLTV 680
>ASPGD|ASPL0000032311 [details] [associations]
symbol:AN5747 species:162425 "Emericella nidulans"
[GO:0005524 "ATP binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0070682
"proteasome regulatory particle assembly" evidence=IEA] [GO:0032968
"positive regulation of transcription elongation from RNA
polymerase II promoter" evidence=IEA] [GO:0045899 "positive
regulation of RNA polymerase II transcriptional preinitiation
complex assembly" evidence=IEA] [GO:0030433 "ER-associated protein
catabolic process" evidence=IEA] [GO:0006289 "nucleotide-excision
repair" evidence=IEA] [GO:0019904 "protein domain specific binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005829
"cytosol" evidence=IEA] [GO:0008540 "proteasome regulatory
particle, base subcomplex" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005737 EMBL:BN001305 GO:GO:0030163 GO:GO:0017111
TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 OMA:EHKEVES
EnsemblFungi:CADANIAT00003315 Uniprot:C8VFJ3
Length = 393
Score = 397 (144.8 bits), Expect = 6.9e-36, P = 6.9e-36
Identities = 94/244 (38%), Positives = 138/244 (56%)
Query: 376 VSFDDIGGLSEYIDALKEMVFFPLLYPDFFASYHITPPRGVLLCGPPGTGKTLIARALAC 435
++F IGGL++ I L+E++ PL P+ F I PP+GVLL GPPGTGKTL+ARA+A
Sbjct: 134 INFAGIGGLNDQIRELREVIELPLKNPELFQRVGIKPPKGVLLYGPPGTGKTLLARAVA- 192
Query: 436 AASKAGQKVSFYMRKGADVLSKWVGEAERQLKLLFEEAQRNQPSIIFFDEIDGLAPVRSS 495
+ + +F + ++ K++GE+ R ++ +F A+ ++P IIF DEID + R S
Sbjct: 193 ----SSMETNFLKVVSSAIVDKYIGESARLIREMFGYAKEHEPCIIFMDEIDAIGGRRFS 248
Query: 496 KQEQIHNSIVSTLLALM---DGLDSRGQVVLIGATNRVDAIDGALRRPGRFDREFNFPLP 552
+ I TL+ L+ DG D G+ +I ATNR D +D AL R GR DR+ PLP
Sbjct: 249 EGTSADREIQRTLMELLNQLDGFDYLGKTKIIMATNRPDTLDPALLRAGRLDRKIEIPLP 308
Query: 553 GCEARAEILDIHTRKWKQPPSRELKSELAASCVGYCGADLKALCTEAAIRAFREKYPQVY 612
R EIL IH+ + + +S + S G GADL+ + TEA + A ++ Y
Sbjct: 309 NEVGRLEILKIHSSTVQMEGDIDFESVVKMSD-GLNGADLRNVVTEAGLFAIKD-YRDAI 366
Query: 613 TSDD 616
DD
Sbjct: 367 NQDD 370
>FB|FBgn0028684 [details] [associations]
symbol:Rpt5 "Regulatory particle triple-A ATPase 5"
species:7227 "Drosophila melanogaster" [GO:0008540 "proteasome
regulatory particle, base subcomplex" evidence=ISS;NAS] [GO:0004175
"endopeptidase activity" evidence=IDA;NAS] [GO:0005838 "proteasome
regulatory particle" evidence=ISS;IDA] [GO:0006508 "proteolysis"
evidence=ISS;IDA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0009987 "cellular process"
evidence=IMP] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR005937 Pfam:PF00004 SMART:SM00382 GO:GO:0005524
GO:GO:0005737 GO:GO:0006508 GO:GO:0016887 GO:GO:0004175
GO:GO:0030163 HSSP:Q01853 TIGRFAMs:TIGR01242 GO:GO:0008540
ChiTaRS:PSMC3 FlyBase:FBgn0028684 EMBL:AF134402
ProteinModelPortal:Q9XZC3 STRING:Q9XZC3 PRIDE:Q9XZC3
InParanoid:Q9XZC3 ArrayExpress:Q9XZC3 Bgee:Q9XZC3 Uniprot:Q9XZC3
Length = 431
Score = 397 (144.8 bits), Expect = 6.9e-36, P = 6.9e-36
Identities = 101/271 (37%), Positives = 149/271 (54%)
Query: 365 ADIQPLQVDE--SVSFDDIGGLSEYIDALKEMVFFPLLYPDFFASYHITPPRGVLLCGPP 422
A ++ ++VDE + F DIGGL + I L E V P+ + + F + I PP+GV+L GPP
Sbjct: 163 ARVKAMEVDERPTEQFSDIGGLDKQIQELIEAVVLPMTHKEKFKNLGIHPPKGVILYGPP 222
Query: 423 GTGKTLIARALACAASKAGQKVSFYMRKGADVLSKWVGEAERQLKLLFEEAQRNQPSIIF 482
GTGKTL+ARA CAA K +F G ++ ++G+ + ++ F A+ P+IIF
Sbjct: 223 GTGKTLLARA--CAAQT---KSTFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPAIIF 277
Query: 483 FDEIDGLAPVRSSKQEQIHNSIVSTLLALMD---GLDSRGQVVLIGATNRVDAIDGALRR 539
DE+D + R ++ + T+L L++ G S + +I ATNRVD + AL R
Sbjct: 278 IDELDAIGTKRFDSEKAGDREVQRTMLELLNQLNGFSSTADIKVIAATNRVDILP-ALLR 336
Query: 540 PGRFDREFNFPLPGCEARAEILDIHTRKWKQPPSRELK-SELAASCVGYCGADLKALCTE 598
GR DR+ FP P EARA I+ IH+RK S ++ EL+ S + GA KA+C E
Sbjct: 337 SGRLDRKIEFPHPNEEARARIMQIHSRKMNV--SNDVNFEELSRSTDDFNGAQCKAVCVE 394
Query: 599 AAIRAFREKYPQVYTSDDKFLIDVDSVTVEK 629
A + A R V T +D F+ + V +K
Sbjct: 395 AGMIALRRSANSV-THED-FMDAIMEVQAKK 423
>RGD|1305969 [details] [associations]
symbol:Vps4b "vacuolar protein sorting 4 homolog B (S.
cerevisiae)" species:10116 "Rattus norvegicus" [GO:0003674
"molecular_function" evidence=ND] [GO:0005524 "ATP binding"
evidence=IEA;ISO] [GO:0005575 "cellular_component" evidence=ND]
[GO:0005634 "nucleus" evidence=IEA;ISO] [GO:0005737 "cytoplasm"
evidence=ISO] [GO:0005764 "lysosome" evidence=IEA;ISO] [GO:0005768
"endosome" evidence=ISO] [GO:0005769 "early endosome"
evidence=IEA;ISO] [GO:0005770 "late endosome" evidence=IEA;ISO]
[GO:0005774 "vacuolar membrane" evidence=IEA;ISO] [GO:0005829
"cytosol" evidence=IEA;ISO] [GO:0006200 "ATP catabolic process"
evidence=ISO] [GO:0006813 "potassium ion transport"
evidence=IEA;ISO] [GO:0007032 "endosome organization"
evidence=IEA;ISO] [GO:0008022 "protein C-terminus binding"
evidence=IEA;ISO] [GO:0008150 "biological_process" evidence=ND]
[GO:0010008 "endosome membrane" evidence=IEA;ISO] [GO:0016197
"endosomal transport" evidence=ISO] [GO:0016887 "ATPase activity"
evidence=IEA;ISO] [GO:0030301 "cholesterol transport" evidence=ISO]
[GO:0032367 "intracellular cholesterol transport" evidence=IEA;ISO]
[GO:0032510 "endosome to lysosome transport via multivesicular body
sorting pathway" evidence=IEA;ISO] [GO:0033993 "response to lipid"
evidence=IEA;ISO] InterPro:IPR007330 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 RGD:1305969 GO:GO:0005829 GO:GO:0005524 GO:GO:0005634
GO:GO:0005774 GO:GO:0005764 GO:GO:0016887 GO:GO:0032367
GO:GO:0010008 GO:GO:0005770 GO:GO:0006813 GO:GO:0033993
Pfam:PF04212 eggNOG:COG0464 GO:GO:0007032 InterPro:IPR015415
Pfam:PF09336 GO:GO:0005769 HOVERGEN:HBG057074 SMART:SM00745
GeneTree:ENSGT00550000074466 HOGENOM:HOG000225146 GO:GO:0032510
EMBL:CH474000 KO:K12196 OrthoDB:EOG4G1MGD CTD:9525 EMBL:BC099128
IPI:IPI00363819 RefSeq:NP_001020887.1 UniGene:Rn.25893 SMR:Q4KLL7
STRING:Q4KLL7 Ensembl:ENSRNOT00000003715 GeneID:360834
KEGG:rno:360834 UCSC:RGD:1305969 InParanoid:Q4KLL7 OMA:XKRTPWR
NextBio:674292 Genevestigator:Q4KLL7 Uniprot:Q4KLL7
Length = 444
Score = 378 (138.1 bits), Expect = 7.5e-36, Sum P(2) = 7.5e-36
Identities = 86/234 (36%), Positives = 134/234 (57%)
Query: 375 SVSFDDIGGLSEYIDALKEMVFFPLLYPDFFASYHITPPRGVLLCGPPGTGKTLIARALA 434
+V + D+ GL +ALKE V P+ +P F TP RG+LL GPPGTGK+ +A+A+A
Sbjct: 130 NVKWSDVAGLEGAKEALKEAVILPIKFPHLFTGKR-TPWRGILLFGPPGTGKSYLAKAVA 188
Query: 435 CAASKAGQKVSFYMRKGADVLSKWVGEAERQLKLLFEEAQRNQPSIIFFDEIDGLAPVRS 494
A+ + +F+ +D++SKW+GE+E+ +K LF+ A+ N+PSIIF DEID L RS
Sbjct: 189 TEANNS----TFFSISSSDLVSKWLGESEKLVKNLFQLARENKPSIIFIDEIDSLCGSRS 244
Query: 495 SKQEQIHNSIVSTLLALMDGL--DSRGQVVLIGATNRVDAIDGALRRPGRFDREFNFPLP 552
+ + I + L M G+ D+ G ++++GATN +D A+RR RF++ PLP
Sbjct: 245 ENESEAARRIKTEFLVQMQGVGVDNDG-ILVLGATNIPWVLDSAIRR--RFEKRIYIPLP 301
Query: 553 GCEARAEILDIHTRKWKQPPSRELKSELAASCVGYCGADLKALCTEAAIRAFRE 606
ARA + +H + + EL GY GAD+ + +A ++ R+
Sbjct: 302 EAHARAAMFRLHLGSTQNSLTEADFQELGRKTDGYSGADISIIVRDALMQPVRK 355
Score = 45 (20.9 bits), Expect = 7.5e-36, Sum P(2) = 7.5e-36
Identities = 18/71 (25%), Positives = 32/71 (45%)
Query: 126 ELSPSKRKKVVEAKPTPRREGLRPRRSMVATRKQLNLDSGDEQGSSEEKVGQDETENGNE 185
E K K+ + AK T + R + +K+ + ++ EE+ G + E GN+
Sbjct: 48 EAQGDKAKQSIRAKCTEYLD--RAEKLKEYLKKK---EKKPQKPMKEEQSGPVD-EKGND 101
Query: 186 SDNDADDGQNE 196
SD +A+ E
Sbjct: 102 SDGEAESDDPE 112
>MGI|MGI:1100499 [details] [associations]
symbol:Vps4b "vacuolar protein sorting 4b (yeast)"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005524 "ATP binding" evidence=ISO] [GO:0005634 "nucleus"
evidence=ISO] [GO:0005737 "cytoplasm" evidence=ISO] [GO:0005764
"lysosome" evidence=ISO] [GO:0005768 "endosome" evidence=ISO]
[GO:0005769 "early endosome" evidence=ISO] [GO:0005770 "late
endosome" evidence=ISO] [GO:0005774 "vacuolar membrane"
evidence=ISO] [GO:0005829 "cytosol" evidence=ISO;IDA] [GO:0006200
"ATP catabolic process" evidence=ISO] [GO:0006810 "transport"
evidence=IEA] [GO:0006813 "potassium ion transport" evidence=IDA]
[GO:0007032 "endosome organization" evidence=IMP] [GO:0007049 "cell
cycle" evidence=IEA] [GO:0008022 "protein C-terminus binding"
evidence=ISO] [GO:0010008 "endosome membrane" evidence=ISO]
[GO:0015031 "protein transport" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0016197 "endosomal transport"
evidence=ISO] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=ISO] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030301
"cholesterol transport" evidence=IMP] [GO:0032367 "intracellular
cholesterol transport" evidence=ISO] [GO:0032510 "endosome to
lysosome transport via multivesicular body sorting pathway"
evidence=ISO] [GO:0033993 "response to lipid" evidence=ISO]
[GO:0051301 "cell division" evidence=IEA] InterPro:IPR007330
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 MGI:MGI:1100499
GO:GO:0005829 GO:GO:0005524 GO:GO:0005634 GO:GO:0005774
GO:GO:0051301 GO:GO:0031902 GO:GO:0015031 GO:GO:0005768
GO:GO:0005764 GO:GO:0016887 GO:GO:0016197 GO:GO:0032367
GO:GO:0006813 GO:GO:0033993 GO:GO:0007049 Pfam:PF04212
eggNOG:COG0464 GO:GO:0007032 InterPro:IPR015415 Pfam:PF09336
GO:GO:0005769 GO:GO:0030301 HOVERGEN:HBG057074 SMART:SM00745
HOGENOM:HOG000225146 GO:GO:0032510 KO:K12196 OrthoDB:EOG4G1MGD
CTD:9525 OMA:AKCAEYL EMBL:U10119 EMBL:AF134119 EMBL:BC003799
IPI:IPI00133700 PIR:S48696 RefSeq:NP_033216.2 UniGene:Mm.18705
UniGene:Mm.483448 PDB:2ZAM PDB:2ZAN PDB:2ZAO PDBsum:2ZAM
PDBsum:2ZAN PDBsum:2ZAO ProteinModelPortal:P46467 SMR:P46467
STRING:P46467 PhosphoSite:P46467 PaxDb:P46467 PRIDE:P46467
Ensembl:ENSMUST00000094646 Ensembl:ENSMUST00000112736 GeneID:20479
KEGG:mmu:20479 InParanoid:P46467 EvolutionaryTrace:P46467
NextBio:298605 Bgee:P46467 CleanEx:MM_VPS4B Genevestigator:P46467
GermOnline:ENSMUSG00000009907 Uniprot:P46467
Length = 444
Score = 378 (138.1 bits), Expect = 9.6e-36, Sum P(2) = 9.6e-36
Identities = 86/234 (36%), Positives = 134/234 (57%)
Query: 375 SVSFDDIGGLSEYIDALKEMVFFPLLYPDFFASYHITPPRGVLLCGPPGTGKTLIARALA 434
+V + D+ GL +ALKE V P+ +P F TP RG+LL GPPGTGK+ +A+A+A
Sbjct: 130 NVKWSDVAGLEGAKEALKEAVILPIKFPHLFTGKR-TPWRGILLFGPPGTGKSYLAKAVA 188
Query: 435 CAASKAGQKVSFYMRKGADVLSKWVGEAERQLKLLFEEAQRNQPSIIFFDEIDGLAPVRS 494
A+ + +F+ +D++SKW+GE+E+ +K LF+ A+ N+PSIIF DEID L RS
Sbjct: 189 TEANNS----TFFSISSSDLVSKWLGESEKLVKNLFQLARENKPSIIFIDEIDSLCGSRS 244
Query: 495 SKQEQIHNSIVSTLLALMDGL--DSRGQVVLIGATNRVDAIDGALRRPGRFDREFNFPLP 552
+ + I + L M G+ D+ G ++++GATN +D A+RR RF++ PLP
Sbjct: 245 ENESEAARRIKTEFLVQMQGVGVDNDG-ILVLGATNIPWVLDSAIRR--RFEKRIYIPLP 301
Query: 553 GCEARAEILDIHTRKWKQPPSRELKSELAASCVGYCGADLKALCTEAAIRAFRE 606
ARA + +H + + EL GY GAD+ + +A ++ R+
Sbjct: 302 EAHARAAMFRLHLGSTQNSLTEADFQELGRKTDGYSGADISIIVRDALMQPVRK 355
Score = 44 (20.5 bits), Expect = 9.6e-36, Sum P(2) = 9.6e-36
Identities = 18/71 (25%), Positives = 32/71 (45%)
Query: 126 ELSPSKRKKVVEAKPTPRREGLRPRRSMVATRKQLNLDSGDEQGSSEEKVGQDETENGNE 185
E K K+ + AK T + R + +K+ + ++ EE+ G + E GN+
Sbjct: 48 EAQGDKAKQSIRAKCTEYLD--RAEKLKEYLKKK---EKKPQKPVKEEQSGPVD-EKGND 101
Query: 186 SDNDADDGQNE 196
SD +A+ E
Sbjct: 102 SDGEAESDDPE 112
>RGD|1311270 [details] [associations]
symbol:Nvl "nuclear VCP-like" species:10116 "Rattus norvegicus"
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISO] [GO:0005730 "nucleolus" evidence=IEA;ISO] [GO:0005737
"cytoplasm" evidence=IEA;ISO] [GO:0016235 "aggresome"
evidence=IEA;ISO] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
RGD:1311270 GO:GO:0005524 GO:GO:0005737 GO:GO:0005730 GO:GO:0016235
GO:GO:0017111 KO:K14571 EMBL:CH473985 CTD:4931 OMA:NDMTLKE
OrthoDB:EOG4ZPDTN GeneTree:ENSGT00570000079239 IPI:IPI00371541
RefSeq:NP_001099450.1 UniGene:Rn.8896 Ensembl:ENSRNOT00000004927
GeneID:289323 KEGG:rno:289323 UCSC:RGD:1311270 NextBio:629627
Uniprot:D3ZTY9
Length = 855
Score = 425 (154.7 bits), Expect = 1.1e-35, Sum P(2) = 1.1e-35
Identities = 101/272 (37%), Positives = 156/272 (57%)
Query: 375 SVSFDDIGGLSEYIDALKEMVFFPLLYPDFFASYHITPPRGVLLCGPPGTGKTLIARALA 434
+V++ D+G L + + L + P+ P+ F + + P GVLL GPPG GKTL+A+A+A
Sbjct: 576 NVTWADVGALEDIREELTMAILAPVRNPEQFRALGLVAPAGVLLAGPPGCGKTLLAKAVA 635
Query: 435 CAASKAGQKVSFYMRKGADVLSKWVGEAERQLKLLFEEAQRNQPSIIFFDEIDGLAPVRS 494
+++G ++F KG ++L+ +VGE+ER ++ +F+ A+ + P +IFFDE+D L P RS
Sbjct: 636 ---NESG--LNFISVKGPELLNMYVGESERAVRQVFQRAKNSAPCVIFFDEVDALCPRRS 690
Query: 495 SKQEQIHNSIVSTLLALMDGLDSRGQVVLIGATNRVDAIDGALRRPGRFDREFNFPLPGC 554
++ +V+ LL MDGL++R QV ++ ATNR D ID A+ RPGR D+ LP
Sbjct: 691 DRETGASVRVVNQLLTEMDGLETRQQVFILAATNRPDIIDPAILRPGRLDKTLFVGLPPP 750
Query: 555 EARAEILDIHTRKWKQPP-SRELKSELAAS---CVGYCGADLKALCTEAAIRAFREKYPQ 610
R IL T+ +PP ++ E A+ C Y GADL AL EA++ A R++
Sbjct: 751 ADRVAILKTITKNGTKPPLDEDVDLEAIANDHRCDCYTGADLSALVREASLCALRQEI-- 808
Query: 611 VYTSDDKFLIDVDSVTVEKYHFIEAMSTITPA 642
+ K I +TV HF EA + P+
Sbjct: 809 ---TGQKNGIGTAELTVSHKHFEEAFRKVKPS 837
Score = 394 (143.8 bits), Expect = 1.6e-33, Sum P(3) = 1.6e-33
Identities = 95/237 (40%), Positives = 138/237 (58%)
Query: 370 LQVDESVSFDDIGGLSEYIDALKEMVFFPLLYPDFFASYHITPPRGVLLCGPPGTGKTLI 429
LQ+ SV F+D+GG + + +M+ + +P+ + + PPRGVLL GPPG GKTL+
Sbjct: 256 LQIS-SVKFEDVGGNDATLKEVCKMLIH-MRHPEVYQHLGVVPPRGVLLHGPPGCGKTLL 313
Query: 430 ARALACAASKAGQKVSFYMRKGADVLSKWVGEAERQLKLLFEEAQRNQPSIIFFDEIDGL 489
A A+A KV+ +++S GE+E++L+ LF++A N P I+F DEID +
Sbjct: 314 AHAIAGELDLPILKVA-----APEIVSGVSGESEQKLRDLFDQAVSNAPCIVFIDEIDAI 368
Query: 490 APVRSSKQEQIHNSIVSTLLALMDGLDS---RGQVVLIGATNRVDAIDGALRRPGRFDRE 546
P R + + IV+ LL MD L++ +V+++GATNR D++D ALRR GRFDRE
Sbjct: 369 TPKREVASKDMERRIVAQLLTCMDDLNNVAATARVLVVGATNRPDSLDPALRRAGRFDRE 428
Query: 547 FNFPLPGCEARAEILDIHTRKWKQPPSRELKSELAASCVGYCGADLKALCTEAAIRA 603
+P +R IL RK + P + S LA G+ GADL ALC EAA+ A
Sbjct: 429 VCLGIPDEASRERILQTLCRKLRLPETFNF-SHLAHLTPGFVGADLMALCREAAVCA 484
Score = 56 (24.8 bits), Expect = 1.6e-33, Sum P(3) = 1.6e-33
Identities = 20/76 (26%), Positives = 36/76 (47%)
Query: 697 AIPLVYRPRLLLCGSEGTGVDHLGPAILHELEKFPVHSLGLPALLSDPSAKTPEEALVHI 756
A+ LV +LL G G G L A+ +E + G P LL+ ++ E A+ +
Sbjct: 608 ALGLVAPAGVLLAGPPGCGKTLLAKAVANESGLNFISVKG-PELLNMYVGES-ERAVRQV 665
Query: 757 FGEARRTTPSILYIPQ 772
F A+ + P +++ +
Sbjct: 666 FQRAKNSAPCVIFFDE 681
Score = 41 (19.5 bits), Expect = 1.1e-35, Sum P(2) = 1.1e-35
Identities = 11/30 (36%), Positives = 15/30 (50%)
Query: 167 EQGSSEEKVGQDETENGNESDNDADDGQNE 196
E G ++ QDE + ES +D DD E
Sbjct: 79 EDGHLAKRARQDEDDEYTESYSD-DDSNME 107
>GENEDB_PFALCIPARUM|PF11_0314 [details] [associations]
symbol:PF11_0314 "26S protease subunit
regulatory subunit 6a, putative" species:5833 "Plasmodium
falciparum" [GO:0004175 "endopeptidase activity" evidence=ISS]
[GO:0006508 "proteolysis" evidence=ISS] [GO:0016887 "ATPase
activity" evidence=ISS] [GO:0000502 "proteasome complex"
evidence=ISS] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 GO:GO:0006508
GO:GO:0016887 GO:GO:0004175 GO:GO:0030163 GO:GO:0000502 HSSP:Q01853
EMBL:AE014186 TIGRFAMs:TIGR01242 KO:K03065 HOGENOM:HOG000225143
OMA:GALMYGP ProtClustDB:CLSZ2433711 RefSeq:XP_001347985.1
ProteinModelPortal:Q8II60 IntAct:Q8II60 MINT:MINT-1730387
PRIDE:Q8II60 EnsemblProtists:PF11_0314:mRNA GeneID:810861
KEGG:pfa:PF11_0314 EuPathDB:PlasmoDB:PF3D7_1130400 Uniprot:Q8II60
Length = 439
Score = 394 (143.8 bits), Expect = 1.4e-35, P = 1.4e-35
Identities = 98/268 (36%), Positives = 144/268 (53%)
Query: 367 IQPLQVDESVSFD--DIGGLSEYIDALKEMVFFPLLYPDFFASYHITPPRGVLLCGPPGT 424
++ ++V E S D DIGGL + I+ L E + P+L+ + F I PP+GVL+ GPPGT
Sbjct: 172 VKAMEVIEKPSEDYSDIGGLDKQIEDLVEAIVLPMLHKEKFEKIGIKPPKGVLMHGPPGT 231
Query: 425 GKTLIARALACAASKAGQKVSFYMRKGADVLSKWVGEAERQLKLLFEEAQRNQPSIIFFD 484
GKTL+ARA CA+ +F G ++ ++G+ + ++ F A+ P+IIF D
Sbjct: 232 GKTLLARA--CASQT---NATFLKLAGPQLVQMFIGDGAKMVRDAFNLAKEKAPAIIFID 286
Query: 485 EIDGLAPVRSSKQEQIHNSIVSTLLALM---DGLDSRGQVVLIGATNRVDAIDGALRRPG 541
E+D + R + + T+L L+ DG + V +I ATNR D +D AL R G
Sbjct: 287 ELDAIGTKRFDSELSGDREVQRTMLELLNQLDGFSTDDTVKVIAATNRPDTLDPALLRSG 346
Query: 542 RFDREFNFPLPGCEARAEILDIHTRKWKQPPSRELKSELAASCVGYCGADLKALCTEAAI 601
R DR+ P P E+RA IL IH+RK + ELA S + GA LKA+C EA +
Sbjct: 347 RLDRKIELPHPNEESRARILQIHSRKMNVHKDVNFE-ELARSTDDFNGAQLKAVCVEAGM 405
Query: 602 RAFREKYPQVYTSDDKFLIDVDSVTVEK 629
A R ++ D F+ + SV +K
Sbjct: 406 IALRRGATEIDHED--FVEGITSVLSKK 431
>UNIPROTKB|Q8II60 [details] [associations]
symbol:PF11_0314 "26S protease subunit regulatory subunit
6a, putative" species:36329 "Plasmodium falciparum 3D7" [GO:0000502
"proteasome complex" evidence=ISS] [GO:0004175 "endopeptidase
activity" evidence=ISS] [GO:0006200 "ATP catabolic process"
evidence=ISS] [GO:0006508 "proteolysis" evidence=ISS] [GO:0016887
"ATPase activity" evidence=ISS] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005737 GO:GO:0006508 GO:GO:0016887 GO:GO:0004175
GO:GO:0030163 GO:GO:0000502 HSSP:Q01853 EMBL:AE014186
TIGRFAMs:TIGR01242 KO:K03065 HOGENOM:HOG000225143 OMA:GALMYGP
ProtClustDB:CLSZ2433711 RefSeq:XP_001347985.1
ProteinModelPortal:Q8II60 IntAct:Q8II60 MINT:MINT-1730387
PRIDE:Q8II60 EnsemblProtists:PF11_0314:mRNA GeneID:810861
KEGG:pfa:PF11_0314 EuPathDB:PlasmoDB:PF3D7_1130400 Uniprot:Q8II60
Length = 439
Score = 394 (143.8 bits), Expect = 1.4e-35, P = 1.4e-35
Identities = 98/268 (36%), Positives = 144/268 (53%)
Query: 367 IQPLQVDESVSFD--DIGGLSEYIDALKEMVFFPLLYPDFFASYHITPPRGVLLCGPPGT 424
++ ++V E S D DIGGL + I+ L E + P+L+ + F I PP+GVL+ GPPGT
Sbjct: 172 VKAMEVIEKPSEDYSDIGGLDKQIEDLVEAIVLPMLHKEKFEKIGIKPPKGVLMHGPPGT 231
Query: 425 GKTLIARALACAASKAGQKVSFYMRKGADVLSKWVGEAERQLKLLFEEAQRNQPSIIFFD 484
GKTL+ARA CA+ +F G ++ ++G+ + ++ F A+ P+IIF D
Sbjct: 232 GKTLLARA--CASQT---NATFLKLAGPQLVQMFIGDGAKMVRDAFNLAKEKAPAIIFID 286
Query: 485 EIDGLAPVRSSKQEQIHNSIVSTLLALM---DGLDSRGQVVLIGATNRVDAIDGALRRPG 541
E+D + R + + T+L L+ DG + V +I ATNR D +D AL R G
Sbjct: 287 ELDAIGTKRFDSELSGDREVQRTMLELLNQLDGFSTDDTVKVIAATNRPDTLDPALLRSG 346
Query: 542 RFDREFNFPLPGCEARAEILDIHTRKWKQPPSRELKSELAASCVGYCGADLKALCTEAAI 601
R DR+ P P E+RA IL IH+RK + ELA S + GA LKA+C EA +
Sbjct: 347 RLDRKIELPHPNEESRARILQIHSRKMNVHKDVNFE-ELARSTDDFNGAQLKAVCVEAGM 405
Query: 602 RAFREKYPQVYTSDDKFLIDVDSVTVEK 629
A R ++ D F+ + SV +K
Sbjct: 406 IALRRGATEIDHED--FVEGITSVLSKK 431
>SGD|S000005643 [details] [associations]
symbol:RPT5 "ATPase of the 19S regulatory particle of the 26S
proteasome" species:4932 "Saccharomyces cerevisiae" [GO:0008540
"proteasome regulatory particle, base subcomplex" evidence=IDA]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0016887
"ATPase activity" evidence=ISS] [GO:0006511 "ubiquitin-dependent
protein catabolic process" evidence=IMP] [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0000502 "proteasome complex"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0045899 "positive regulation of RNA polymerase II
transcriptional preinitiation complex assembly" evidence=IMP]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0070682
"proteasome regulatory particle assembly" evidence=IMP]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
SGD:S000005643 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
EMBL:BK006948 GO:GO:0006511 GO:GO:0017111 EMBL:X90518 EMBL:X94335
GO:GO:0045899 GeneTree:ENSGT00560000077230 GO:GO:0070682
eggNOG:COG1222 TIGRFAMs:TIGR01242 KO:K03065 HOGENOM:HOG000225143
GO:GO:0008540 PDB:4B4T PDBsum:4B4T OMA:GALMYGP OrthoDB:EOG40VZZ2
EMBL:X73569 EMBL:Z75025 PIR:S46605 RefSeq:NP_014760.3
RefSeq:NP_014762.3 ProteinModelPortal:P33297 SMR:P33297
DIP:DIP-1590N IntAct:P33297 MINT:MINT-383887 STRING:P33297
PaxDb:P33297 PeptideAtlas:P33297 EnsemblFungi:YOR117W GeneID:854284
GeneID:854286 KEGG:sce:YOR117W KEGG:sce:YOR119C KO:K07178
NextBio:976260 Genevestigator:P33297 GermOnline:YOR117W
Uniprot:P33297
Length = 434
Score = 394 (143.8 bits), Expect = 1.4e-35, P = 1.4e-35
Identities = 96/268 (35%), Positives = 143/268 (53%)
Query: 367 IQPLQVDE--SVSFDDIGGLSEYIDALKEMVFFPLLYPDFFASYHITPPRGVLLCGPPGT 424
++ ++VDE + ++ D+GGL + I+ L E + P+ D F I P+G L+ GPPGT
Sbjct: 167 VKAMEVDEKPTETYSDVGGLDKQIEELVEAIVLPMKRADKFKDMGIRAPKGALMYGPPGT 226
Query: 425 GKTLIARALACAASKAGQKVSFYMRKGADVLSKWVGEAERQLKLLFEEAQRNQPSIIFFD 484
GKTL+ARA CAA +F ++ ++GE + ++ F A+ P+IIF D
Sbjct: 227 GKTLLARA--CAAQT---NATFLKLAAPQLVQMYIGEGAKLVRDAFALAKEKAPTIIFID 281
Query: 485 EIDGLAPVRSSKQEQIHNSIVSTLLALM---DGLDSRGQVVLIGATNRVDAIDGALRRPG 541
E+D + R ++ + T+L L+ DG S +V ++ ATNRVD +D AL R G
Sbjct: 282 ELDAIGTKRFDSEKSGDREVQRTMLELLNQLDGFSSDDRVKVLAATNRVDVLDPALLRSG 341
Query: 542 RFDREFNFPLPGCEARAEILDIHTRKWKQPPSRELKSELAASCVGYCGADLKALCTEAAI 601
R DR+ FPLP ++RA+IL IH+RK + ELA S + GA LKA+ EA +
Sbjct: 342 RLDRKIEFPLPSEDSRAQILQIHSRKMTTDDDINWQ-ELARSTDEFNGAQLKAVTVEAGM 400
Query: 602 RAFREKYPQVYTSDDKFLIDVDSVTVEK 629
A R V D F+ + V K
Sbjct: 401 IALRNGQSSVKHED--FVEGISEVQARK 426
>DICTYBASE|DDB_G0268334 [details] [associations]
symbol:DDB_G0268334 "Probable 26S protease subunit
YTA6" species:44689 "Dictyostelium discoideum" [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
dictyBase:DDB_G0268334 GO:GO:0005524 EMBL:AAFI02000003
eggNOG:COG0464 GO:GO:0017111 InterPro:IPR015415 Pfam:PF09336
ProtClustDB:CLSZ2729356 RefSeq:XP_647261.1
ProteinModelPortal:Q55GC3 EnsemblProtists:DDB0202133 GeneID:8616066
KEGG:ddi:DDB_G0268334 InParanoid:Q55GC3 OMA:TENENEA Uniprot:Q55GC3
Length = 792
Score = 391 (142.7 bits), Expect = 2.7e-35, Sum P(2) = 2.7e-35
Identities = 89/235 (37%), Positives = 132/235 (56%)
Query: 374 ESVSFDDIGGLSEYIDALKEMVFFPLLYPDFFASYHITPPRGVLLCGPPGTGKTLIARAL 433
+ V + DI GLSE + EMV FP++ P+ F I PP+G+LL GPPGTGKT+I +A+
Sbjct: 515 QEVKWGDIAGLSEVKSQIMEMVVFPIIRPELFKGLRI-PPKGLLLFGPPGTGKTMIGKAI 573
Query: 434 ACAASKAGQKVSFYMRKGADVLSKWVGEAERQLKLLFEEAQRNQPSIIFFDEIDGLAPVR 493
A K +F+ + + SKW+GE E+ ++ LF A+ PS+IF DEID L R
Sbjct: 574 ATQV-----KATFFSISASTLTSKWIGEGEKMVRCLFAVARCFLPSVIFIDEIDSLLAAR 628
Query: 494 SSKQEQIHNSIVSTLLALMDGL--DSRGQVVLIGATNRVDAIDGALRRPGRFDREFNFPL 551
+ + + I + L DG+ ++ Q++LIGATNR D +D A RR R + PL
Sbjct: 629 TENENEASRRIKTEFLIQWDGVAGNAEDQMLLIGATNRPDELDEAARR--RMTKRLYIPL 686
Query: 552 PGCEARAEILDIHTRKWKQPPSRELKSELAASCVGYCGADLKALCTEAAIRAFRE 606
P E+R ++ + S + +A+ GY GAD+K+L TEAA + R+
Sbjct: 687 PDNESRLALVKNLLKNENHEISPDDMQNIASISDGYSGADMKSLSTEAAYQPIRD 741
Score = 72 (30.4 bits), Expect = 2.7e-35, Sum P(2) = 2.7e-35
Identities = 36/175 (20%), Positives = 76/175 (43%)
Query: 36 YYNPIRPRKSKTKARTAASQIARMFGPGKRTV---RTSNKNSVPLNLRRSTRKRRISVNL 92
Y ++P + K + S I + G + + R NKNS+ LN + + S N
Sbjct: 162 YDKSLQPPQPKLHSNFNDSNINSIIGEFELLLPPERIINKNSLTLNSQYNDNSSSNSNNN 221
Query: 93 EDYT-DSSGSE-----DEDLMRPSY-RPLRNRMRNNMSQDELSPSKRKKVVEAK-PTPRR 144
+YT D+ ++ ++ L+ +Y R + N +++ K++K+ + + +R
Sbjct: 222 NNYTIDNFQTKQPINLNKVLINTNYLSEQRQLIINKQEKEKQEQIKQQKLQQQRIEQEQR 281
Query: 145 EGL----RPRRSMVATRKQLNLDSGDEQGSSEEKVGQDETENGNESDNDADDGQN 195
E L R R ++QL + +Q +++ + N N ++N++ N
Sbjct: 282 EKLEQEQRERERERERKEQLEREKQQQQQQQQQRQSSNNNNNNNNNNNNSKFSYN 336
Score = 61 (26.5 bits), Expect = 3.8e-34, Sum P(2) = 3.8e-34
Identities = 31/164 (18%), Positives = 59/164 (35%)
Query: 41 RPRKS---KTKARTAASQIARMFGPGKRTVRTSNKNS-VPLNLRRSTRKRRISVNLEDYT 96
R RK + K + Q R +N NS N + R++ + D
Sbjct: 295 RERKEQLEREKQQQQQQQQQRQSSNNNNNNNNNNNNSKFSYNNNNNNNNGRLAPSPMDLD 354
Query: 97 DSSGSEDEDLMRPSYRPLRNRM--RNNMSQDELSPSKRKKVVEAKPTPRREGLRP---RR 151
+ + D + + N++ +N + + +S + +K + P P P +R
Sbjct: 355 EDEVIKVGDFKSAKDQFIDNQISDKNKKNSNVVSNTIKKMAASSNPNPVPPSSLPGGKKR 414
Query: 152 SMVATRKQLNLDSGDEQGSSEEKVGQDETENGNESDNDADDGQN 195
V KQ + +EQ + + N N+S N+ + N
Sbjct: 415 RFVPPVKQDEQEEQEEQNKKQNLSNNNNNNNNNKSINNNKNNNN 458
Score = 51 (23.0 bits), Expect = 4.2e-33, Sum P(2) = 4.2e-33
Identities = 7/38 (18%), Positives = 22/38 (57%)
Query: 158 KQLNLDSGDEQGSSEEKVGQDETENGNESDNDADDGQN 195
K+ NL + + ++ + + ++ N N ++N+ ++ Q+
Sbjct: 433 KKQNLSNNNNNNNNNKSINNNKNNNNNNNNNNNNNNQS 470
Score = 50 (22.7 bits), Expect = 5.4e-33, Sum P(2) = 5.4e-33
Identities = 21/125 (16%), Positives = 54/125 (43%)
Query: 65 RTVRTSNKNSVPLNLRRSTRKRRISVNLEDYTDSSGSEDEDLMRPSYRPLRNRMRNNMSQ 124
+T + N N V +N + +R++ +N ++ + + L + + + R + Q
Sbjct: 230 QTKQPINLNKVLINTNYLSEQRQLIINKQEKEKQEQIKQQKLQQ---QRIEQEQREKLEQ 286
Query: 125 DELSPSKRKKVVEAKPTPRREGLRPRRSMVATRKQLNLDSGDEQGSSEEKVGQDETENGN 184
++ +R++ E K RE + ++ R+ N ++ + ++ K N N
Sbjct: 287 EQ---RERERERERKEQLEREKQQQQQQQ-QQRQSSNNNNNNNNNNNNSKFSY----NNN 338
Query: 185 ESDND 189
++N+
Sbjct: 339 NNNNN 343
>ASPGD|ASPL0000034610 [details] [associations]
symbol:pexF species:162425 "Emericella nidulans"
[GO:0006631 "fatty acid metabolic process" evidence=IMP]
[GO:0006625 "protein targeting to peroxisome" evidence=IMP]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] [GO:0005777 "peroxisome" evidence=IEA] [GO:0046982
"protein heterodimerization activity" evidence=IEA] [GO:0016887
"ATPase activity" evidence=IEA] [GO:0001302 "replicative cell
aging" evidence=IEA] [GO:0016562 "protein import into peroxisome
matrix, receptor recycling" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 EMBL:BN001306 GO:GO:0017111
EnsemblFungi:CADANIAT00010163 OMA:CFSGDWV Uniprot:C8VJ57
Length = 1476
Score = 415 (151.1 bits), Expect = 3.0e-35, Sum P(2) = 3.0e-35
Identities = 110/309 (35%), Positives = 171/309 (55%)
Query: 337 ASGWGHQGDTLAALTSGIQTAGPSSKGGADIQPLQVDESVSFDDIGGLSEYIDALKEMVF 396
A G +G T A + + A K AD +VS++D+GGL+ DAL E +
Sbjct: 986 AGGEAVRGVTKADFDAAVDAA---RKNFADSIGAPKIPNVSWEDVGGLTNVKDALVETIQ 1042
Query: 397 FPLLYPDFFASYHITPPRGVLLCGPPGTGKTLIARALACAASKAGQKVSFYMRKGADVLS 456
PL P+ FA + G+L GPPGTGKTL+A+A+A S ++F+ KG ++L+
Sbjct: 1043 LPLERPELFAK-GMKKRSGILFYGPPGTGKTLLAKAIATEFS-----LNFFSVKGPELLN 1096
Query: 457 KWVGEAERQLKLLFEEAQRNQPSIIFFDEIDGLAPVRSSKQEQ--IHNSIVSTLLALMDG 514
++GE+E ++ +F+ A+ +P ++FFDE+D +AP R ++ + + + IVS LLA +DG
Sbjct: 1097 MYIGESEANVRRVFQRARDARPCVVFFDELDSVAPKRGNQGDSGGVMDRIVSQLLAELDG 1156
Query: 515 L----DSRGQVVLIGATNRVDAIDGALRRPGRFDREFNFPLPGC-EARAEILDIHTRKWK 569
+ ++ G V +IGATNR D +D AL RPGRFD+ + E +A IL+ TRK+
Sbjct: 1157 MNGGEENSGGVFVIGATNRPDLLDTALLRPGRFDKMLYLGVSDTHEKQATILEALTRKFA 1216
Query: 570 QPPSRELKSELAASCVGYCGADLKALCTEAAIRAFREKYPQVYTSDDKFLIDVDSVTVEK 629
P L + Y GADL ALC++A ++A K V D+K + + V
Sbjct: 1217 LAPDLSLARVSERLPLTYTGADLYALCSDAMLKAITRKATAV---DEK-IKQLPGGPVST 1272
Query: 630 YHFIEAMST 638
+F + +ST
Sbjct: 1273 AYFFDHLST 1281
Score = 57 (25.1 bits), Expect = 3.0e-35, Sum P(2) = 3.0e-35
Identities = 22/82 (26%), Positives = 38/82 (46%)
Query: 122 MSQDELSPSKRKKVVEAKPTPRR--EGLRPRRSMVATRKQLNLD-SGDEQ--GSSEEKVG 176
+SQ L P+ + +++A+P R LRP + + D + +EQ ++E+K
Sbjct: 264 VSQGLLLPTTKIVLIQARPHGNRAQRSLRPASGFLKQVAEDEADDTSNEQFYSAAEDKPV 323
Query: 177 QDETE-----NGNESDNDADDG 193
D TE N ES+ + G
Sbjct: 324 DDSTEMESTSNAEESETEGSGG 345
Score = 44 (20.5 bits), Expect = 7.0e-34, Sum P(2) = 7.0e-34
Identities = 10/35 (28%), Positives = 19/35 (54%)
Query: 163 DSGDEQGSSEEKVGQDETENGNESDNDADDGQNEI 197
DS + + +S + + E GN SD +DD +++
Sbjct: 325 DSTEMESTSNAEESETEGSGGNTSDT-SDDSLDDM 358
>RGD|1595990 [details] [associations]
symbol:Spata5l1 "spermatogenesis associated 5-like 1"
species:10116 "Rattus norvegicus" [GO:0005524 "ATP binding"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
RGD:1595990 GO:GO:0005524 GeneTree:ENSGT00700000104502
GO:GO:0017111 EMBL:CH473949 CTD:79029 OrthoDB:EOG42RD70
IPI:IPI00357915 RefSeq:NP_001103117.1 UniGene:Rn.151898
Ensembl:ENSRNOT00000043414 GeneID:691729 KEGG:rno:691729
UCSC:RGD:1595990 NextBio:743659 Uniprot:D4A2B7
Length = 747
Score = 412 (150.1 bits), Expect = 3.1e-35, P = 3.1e-35
Identities = 109/287 (37%), Positives = 154/287 (53%)
Query: 365 ADIQPLQVDESVSFDDIGGLSEYIDALKEMVFFPLLYPDFFASYHITPPRGVLLCGPPGT 424
+D P QV+ +GGLSE D+L+E++ PL YP A+ + PRGVLL GPPG
Sbjct: 180 SDKPPPQVEPPGEVT-LGGLSETADSLRELLRLPLCYPLALAALGLAVPRGVLLAGPPGV 238
Query: 425 GKTLIARALACAASKAGQKVSFYMRKGADVLSKWVGEAERQLKLLFEEAQR---NQPSII 481
GKT + RA+A A VS +G GE E ++ +F+ AQ PS++
Sbjct: 239 GKTQLVRAVAREAGAELLAVSAPALQGTRP-----GETEENVRRVFQRAQELASRGPSLL 293
Query: 482 FFDEIDGLAPVRSSKQEQIHNSIVSTLLALMDGLDSRGQVVLIGATNRVDAIDGALRRPG 541
F DE+D L P R Q + +V+ +L L+DG+ +VV++GATNR D +D ALRRPG
Sbjct: 294 FLDEVDALCPRRGGPQRAPESRVVAQVLTLLDGIHGDREVVVVGATNRPDELDPALRRPG 353
Query: 542 RFDREFNFPLPGCEARAEILDIHTRKWKQPPSRELKSELAASC-VGYCGADLKALCTEAA 600
RFDRE P + R IL + T K P S + L A VGY GADL ALC EAA
Sbjct: 354 RFDREVIIGTPTLKQREAILGVITSK--MPISSHIDLGLLAEMTVGYVGADLTALCREAA 411
Query: 601 IRAFREKYPQVYTSDDKFLIDVDSVTVEKYHFIEAMSTITPAAHRGA 647
A + ++K + ++ +E+ F+EA + P++ R +
Sbjct: 412 TCALLK--------NEK---NQNNPKIEETDFLEAFKKVQPSSFRSS 447
Score = 367 (134.2 bits), Expect = 2.9e-30, P = 2.9e-30
Identities = 107/304 (35%), Positives = 157/304 (51%)
Query: 360 SSKGGADIQPLQVDESVSFDDIGGLSEYIDALKEMVFFPLLYPDFFASYHITPPRGVLLC 419
SS G DI+P V ++ IGGL + LK+ V +PL +P FA +T P+G+LL
Sbjct: 446 SSIGLTDIRP------VGWEQIGGLEDVKLKLKQCVEWPLKFPQEFARMGLTQPKGLLLY 499
Query: 420 GPPGTGKTLIARALACAASKAGQKVSFYMRKGADVLSKWVGEAERQLKLLFEEAQRNQPS 479
GPPG KT + RALA + SF GAD+ S +VG++E+ L +F +A+ N P+
Sbjct: 500 GPPGCAKTTLVRALATSCH-----CSFVSVCGADLFSPFVGDSEKVLSQVFRQARANTPA 554
Query: 480 IIFFDEIDGLAPVRS--SKQEQIHNSIVSTLLALMDGL-----DSRGQ------------ 520
++F DEID + RS S ++S LL +DG+ + RG
Sbjct: 555 LVFLDEIDSVLGSRSVGSSGCDARERVLSVLLNELDGVGVRTVERRGSKASQQECQEILS 614
Query: 521 --VVLIGATNRVDAIDGALRRPGRFDREFNFPLPGCEARAEILDIHTRKWKQPPSRELKS 578
V+++ ATNR D +D AL RPGR D+ P P E R IL + T + L++
Sbjct: 615 RSVMIVVATNRPDVLDDALLRPGRLDKMVYVPPPDREGRLSILKVCTNNMPIGLNVSLEN 674
Query: 579 ELAASCVGYCGADLKALCTEAAIRAFREKYPQVYTSDDKFLIDVDSVTVEKYHFIEAMST 638
A +C + GADL+ LC EAA+ A +E +++ TVE+ HF EA+ T
Sbjct: 675 LAAETCY-FSGADLRNLCKEAALFALQEN-------------GLEATTVEQEHFTEALKT 720
Query: 639 ITPA 642
+ P+
Sbjct: 721 VKPS 724
>FB|FBgn0027605 [details] [associations]
symbol:Vps4 "Vacuolar protein sorting 4" species:7227
"Drosophila melanogaster" [GO:0006886 "intracellular protein
transport" evidence=ISS] [GO:0016887 "ATPase activity"
evidence=ISS] [GO:0005524 "ATP binding" evidence=IEA] [GO:0006911
"phagocytosis, engulfment" evidence=IMP] [GO:0044130 "negative
regulation of growth of symbiont in host" evidence=IMP] [GO:0045197
"establishment or maintenance of epithelial cell apical/basal
polarity" evidence=IMP] [GO:0030036 "actin cytoskeleton
organization" evidence=IMP] InterPro:IPR007330 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0006911 GO:GO:0030036
EMBL:AE014298 GO:GO:0006200 GO:GO:0016887 GO:GO:0044130
Pfam:PF04212 eggNOG:COG0464 InterPro:IPR015415 Pfam:PF09336
SMART:SM00745 GO:GO:0045197 GeneTree:ENSGT00550000074466
HSSP:Q9LCZ4 KO:K12196 OMA:FTGKRIP EMBL:AF145606 RefSeq:NP_573258.1
UniGene:Dm.3175 SMR:Q9Y162 IntAct:Q9Y162 MINT:MINT-919908
STRING:Q9Y162 EnsemblMetazoa:FBtr0074504 GeneID:32777
KEGG:dme:Dmel_CG6842 UCSC:CG6842-RA CTD:32777 FlyBase:FBgn0027605
InParanoid:Q9Y162 OrthoDB:EOG4K98TM ChiTaRS:Vps4 GenomeRNAi:32777
NextBio:780321 Uniprot:Q9Y162
Length = 442
Score = 376 (137.4 bits), Expect = 3.3e-35, Sum P(2) = 3.3e-35
Identities = 85/233 (36%), Positives = 133/233 (57%)
Query: 376 VSFDDIGGLSEYIDALKEMVFFPLLYPDFFASYHITPPRGVLLCGPPGTGKTLIARALAC 435
V + D+ GL +ALKE V P+ +P F I P +G+LL GPPGTGK+ +A+A+A
Sbjct: 129 VQWSDVAGLDAAKEALKEAVILPIKFPQLFTGKRI-PWKGILLFGPPGTGKSYLAKAVAT 187
Query: 436 AASKAGQKVSFYMRKGADVLSKWVGEAERQLKLLFEEAQRNQPSIIFFDEIDGLAPVRSS 495
A+++ +F+ +D++SKW+GE+E+ +K LFE A++++PSIIF DEID + RS
Sbjct: 188 EANRS----TFFSVSSSDLMSKWLGESEKLVKNLFELARQHKPSIIFIDEIDSMCSARSD 243
Query: 496 KQEQIHNSIVSTLLALMDGL--DSRGQVVLIGATNRVDAIDGALRRPGRFDREFNFPLPG 553
+ I + L M G+ D+ G ++++GATN +D A+RR RF++ PLP
Sbjct: 244 NENDSVRRIKTEFLVQMQGVGNDTDG-ILVLGATNIPWVLDSAIRR--RFEKRIYIPLPE 300
Query: 554 CEARAEILDIHTRKWKQPPSRELKSELAASCVGYCGADLKALCTEAAIRAFRE 606
AR + IH + + ELA GY GAD+ + +A + R+
Sbjct: 301 AHARLVMFKIHLGNTTHVLTEQDLKELAGKTEGYSGADISIVVRDALMEPVRK 353
Score = 41 (19.5 bits), Expect = 3.3e-35, Sum P(2) = 3.3e-35
Identities = 13/38 (34%), Positives = 15/38 (39%)
Query: 137 EAKPTPRREGLRPRRSMVATRKQLNLDSGDEQGSSEEK 174
+ K P +EG S K DS DE G EK
Sbjct: 77 KGKKKPIKEG---GESSAKDDKDKKSDSDDEDGDDPEK 111
Score = 39 (18.8 bits), Expect = 5.3e-35, Sum P(2) = 5.3e-35
Identities = 9/30 (30%), Positives = 14/30 (46%)
Query: 167 EQGSSEEKVGQDETENGNESDNDADDGQNE 196
E G S K D+ + + D D DD + +
Sbjct: 85 EGGESSAK--DDKDKKSDSDDEDGDDPEKK 112
Score = 38 (18.4 bits), Expect = 6.7e-35, Sum P(2) = 6.7e-35
Identities = 8/28 (28%), Positives = 16/28 (57%)
Query: 93 EDYTDSSGSEDEDLMRPSYRPLRNRMRN 120
+D S S+DED P + L++++ +
Sbjct: 93 DDKDKKSDSDDEDGDDPEKKKLQSKLED 120
>SGD|S000003957 [details] [associations]
symbol:RIX7 "Putative ATPase of the AAA family" species:4932
"Saccharomyces cerevisiae" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA;IDA] [GO:0000055 "ribosomal large subunit
export from nucleus" evidence=IMP] [GO:0016887 "ATPase activity"
evidence=ISS] [GO:0005730 "nucleolus" evidence=IEA;IDA] [GO:0042254
"ribosome biogenesis" evidence=IEA] [GO:0042273 "ribosomal large
subunit biogenesis" evidence=IGI;IMP] [GO:0030687 "preribosome,
large subunit precursor" evidence=IDA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 SGD:S000003957
GO:GO:0005524 GO:GO:0005730 EMBL:BK006945 GO:GO:0016887
eggNOG:COG0464 HOGENOM:HOG000223225 GO:GO:0042273 GO:GO:0030687
GO:GO:0000055 KO:K14571 OMA:NDMTLKE GeneTree:ENSGT00570000079239
EMBL:Z73139 PIR:S64785 RefSeq:NP_013066.1 ProteinModelPortal:Q07844
SMR:Q07844 DIP:DIP-6385N IntAct:Q07844 MINT:MINT-621241
STRING:Q07844 PaxDb:Q07844 PeptideAtlas:Q07844 EnsemblFungi:YLL034C
GeneID:850625 KEGG:sce:YLL034C CYGD:YLL034c OrthoDB:EOG40GH00
NextBio:966532 Genevestigator:Q07844 GermOnline:YLL034C
Uniprot:Q07844
Length = 837
Score = 398 (145.2 bits), Expect = 5.2e-33, Sum P(3) = 5.2e-33
Identities = 101/280 (36%), Positives = 155/280 (55%)
Query: 376 VSFDDIGGLSEYIDALKEMVFFPLLYPDFFASYHITPPRGVLLCGPPGTGKTLIARALAC 435
V++ ++G L L + P+ P+ + I+ P GVLL GPPG GKTL+A+A+A
Sbjct: 530 VTWANVGALQRVRLELNMAIVQPIKRPELYEKVGISAPGGVLLWGPPGCGKTLLAKAVA- 588
Query: 436 AASKAGQKVSFYMRKGADVLSKWVGEAERQLKLLFEEAQRNQPSIIFFDEIDGLAPVRSS 495
S+A +F KG ++L+K+VGE+ER ++ +F A+ + P +IFFDE+D L P R +
Sbjct: 589 NESRA----NFISIKGPELLNKYVGESERSIRQVFTRARASVPCVIFFDELDALVPRRDT 644
Query: 496 KQEQIHNSIVSTLLALMDGLDSRGQVVLIGATNRVDAIDGALRRPGRFDREFNFPLPGCE 555
+ + +V+TLL +DGL+ R + +IGATNR D ID A+ RPGR D+ LP E
Sbjct: 645 SLSESSSRVVNTLLTELDGLNDRRGIFVIGATNRPDMIDPAMLRPGRLDKSLFIELPNTE 704
Query: 556 ARAEILDIHTRKWKQPPSRELK-SELAAS--CVGYCGADLKALCTEAAIRAFREKYPQ-- 610
+ +I+ T+ P S ++ E+ + C + GADL AL E+++ A + K+ Q
Sbjct: 705 EKLDIIKTLTKSHGTPLSSDVDFEEIIRNEKCNNFSGADLAALVRESSVLALKRKFFQSE 764
Query: 611 ----VYTSD-DKFLIDVDSVTVEKYHFIEAMSTITPAAHR 645
V +D DK D+ SV V I MS A +
Sbjct: 765 EIQSVLDNDLDKEFEDL-SVGVSGEEIIVTMSDFRSALRK 803
Score = 395 (144.1 bits), Expect = 3.7e-35, Sum P(3) = 3.7e-35
Identities = 98/244 (40%), Positives = 141/244 (57%)
Query: 377 SFDDIGGLSEYIDALKEMVFFPLLYPDFFASYHITPPRGVLLCGPPGTGKTLIARALACA 436
S +GG+ + + L E++ P+L+P+ F S + PPRGVLL GPPG GKT IA ALA
Sbjct: 203 SLKSLGGMDDVVAQLMELIGLPILHPEIFLSTGVEPPRGVLLHGPPGCGKTSIANALA-- 260
Query: 437 ASKAGQ-KVSFYMRKGADVLSKWVGEAERQLKLLFEEAQRNQPSIIFFDEIDGLAPVRSS 495
G+ +V F V+S GE+E++++ LF+EA+ P ++FFDEID + P R
Sbjct: 261 ----GELQVPFISISAPSVVSGMSGESEKKIRDLFDEARSLAPCLVFFDEIDAITPKRDG 316
Query: 496 -KQEQIHNSIVSTLLALMDGLD---SRGQ-VVLIGATNRVDAIDGALRRPGRFDREFNFP 550
Q ++ IV+ LL MD L + G+ V++IGATNR D++D ALRR GRFDRE
Sbjct: 317 GAQREMERRIVAQLLTSMDELTMEKTNGKPVIIIGATNRPDSLDAALRRAGRFDREICLN 376
Query: 551 LPGCEARAEILDIHTRKWKQPPSRELKSELAASCVGYCGADLKALCTEAAIRAFREKYPQ 610
+P +R IL + K + + ++LA G+ GADLKAL T A A + + Q
Sbjct: 377 VPNEVSRLHILKKMSDNLKIDGAIDF-AKLAKLTPGFVGADLKALVTAAGTCAIKRIF-Q 434
Query: 611 VYTS 614
Y +
Sbjct: 435 TYAN 438
Score = 72 (30.4 bits), Expect = 3.7e-35, Sum P(3) = 3.7e-35
Identities = 44/179 (24%), Positives = 79/179 (44%)
Query: 599 AAIRAFREKYPQVYTSDDKFLIDVDSVTVEKYH-FIEAMSTITPAAHR-G-ATVHSRPLS 655
+ ++ F YP+ + + L+ + KY F++A+ TI P A R G ATV +
Sbjct: 480 SVVQQFIRNYPEPLSGEQLSLLSI------KYEDFLKALPTIQPTAKREGFATVPDVTWA 533
Query: 656 LVVAPCLQRHLQKAMNYISDIFPPLGMSSELTKLCMLSHGSAIPLVYRPRLLLCGSEGTG 715
V A LQR ++ +N I P+ K+ + + G +LL G G G
Sbjct: 534 NVGA--LQR-VRLELNMA--IVQPIKRPELYEKVGISAPGG---------VLLWGPPGCG 579
Query: 716 VDHLGPAILHELEKFPVHSLGLPALLSDPSAKTPEEALVHIFGEARRTTPSILYIPQFN 774
L A+ +E + G P LL+ ++ E ++ +F AR + P +++ + +
Sbjct: 580 KTLLAKAVANESRANFISIKG-PELLNKYVGES-ERSIRQVFTRARASVPCVIFFDELD 636
Score = 48 (22.0 bits), Expect = 5.2e-33, Sum P(3) = 5.2e-33
Identities = 10/17 (58%), Positives = 13/17 (76%)
Query: 170 SSEEKVGQDETENGNES 186
SSE+ + DET NG+ES
Sbjct: 449 SSEDNMEIDETANGDES 465
Score = 39 (18.8 bits), Expect = 3.7e-35, Sum P(3) = 3.7e-35
Identities = 19/70 (27%), Positives = 31/70 (44%)
Query: 77 LNLRRSTRKRRISVNLEDYTDSSGSEDEDLMRPSY--RPLR-NRMRNNMSQDELSPSKRK 133
L+ +RS R+ E+ ++ G EDED+ + + L + +LS + K
Sbjct: 32 LDRKRSLRQESQG---EEGENNEGEEDEDIFESMFFAKDLTAGEIFTFCLTKDLSLQRVK 88
Query: 134 KVVEAKPTPR 143
KVV K R
Sbjct: 89 KVVLQKTIDR 98
>DICTYBASE|DDB_G0282181 [details] [associations]
symbol:nvl "valosin-containing protein" species:44689
"Dictyostelium discoideum" [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005730
"nucleolus" evidence=IEA;ISS] [GO:0000055 "ribosomal large subunit
export from nucleus" evidence=ISS] [GO:0042254 "ribosome
biogenesis" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 Pfam:PF00004 SMART:SM00382
dictyBase:DDB_G0282181 GO:GO:0005524 GO:GO:0005730
GenomeReviews:CM000152_GR EMBL:AAFI02000045 HSSP:Q01853
eggNOG:COG0464 GO:GO:0017111 GO:GO:0000055 KO:K14571
RefSeq:XP_640327.1 ProteinModelPortal:Q54SY2
EnsemblProtists:DDB0237516 GeneID:8623428 KEGG:ddi:DDB_G0282181
InParanoid:Q54SY2 OMA:KQIQYYK ProtClustDB:CLSZ2846768
Uniprot:Q54SY2
Length = 867
Score = 425 (154.7 bits), Expect = 3.8e-35, Sum P(3) = 3.8e-35
Identities = 107/275 (38%), Positives = 148/275 (53%)
Query: 375 SVSFDDIGGLSEYIDALKEMVFFPLLYPDFFASYHITPPRGVLLCGPPGTGKTLIARALA 434
+V++DD+G LS + L + P+ YP + + I P GVL+ GPPG GKTL+A+A+A
Sbjct: 562 NVTWDDVGALSGVREELTNSILRPIRYPKKYKNMGIDSPAGVLMYGPPGCGKTLLAKAIA 621
Query: 435 CAASKAGQKVSFYMRKGADVLSKWVGEAERQLKLLFEEAQRNQPSIIFFDEIDGLAPVRS 494
+ +F KG ++L+K+VGE+ER ++ +F+ A + P +IFFDE D LAP R
Sbjct: 622 SEC-----QANFISVKGPELLNKYVGESERAVRQVFQRAAASSPCVIFFDEFDALAPKRG 676
Query: 495 SKQ---EQIHNSIVSTLLALMDGLDSRGQVVLIGATNRVDAIDGALRRPGRFDREFNFPL 551
Q +V+ LL MDGL+ R +V +I ATNR D ID A+ RPGR D+ PL
Sbjct: 677 GGDGGGNQATERVVNQLLTEMDGLEKRSEVFIIAATNRPDIIDAAMCRPGRLDKMVYVPL 736
Query: 552 PGCEARAEILDIHTRKWKQPPSREL-KSELAASCVGYCGADLKALCTEAAIRAFREKYPQ 610
P E R EIL T K +L K C + GADL L EAA A +
Sbjct: 737 PSPEERCEILKTLTHKIPIHQDVDLIKVGTDLRCHSFSGADLSLLVKEAANHAISRGF-- 794
Query: 611 VYTSDDKFLIDVDSVTVEKYHFIEAMSTITPAAHR 645
D + D+VT+E FI A+S I P+ R
Sbjct: 795 -----DNNSTEPDTVTMED--FIFALSKIKPSVSR 822
Score = 253 (94.1 bits), Expect = 2.8e-29, Sum P(5) = 2.8e-29
Identities = 52/143 (36%), Positives = 85/143 (59%)
Query: 375 SVSFDDIGGLSEYIDALKEMVFFPLLYPDFFASYHITPPRGVLLCGPPGTGKTLIARALA 434
+++F ++GG+ + ++E + +P+ +P+ ++ + PPRG+LL GP G GKTL+A+A+A
Sbjct: 212 TINFSNLGGVESCLRDIREHIEYPICHPEIYSHLGVEPPRGILLHGPSGCGKTLLAKAIA 271
Query: 435 CAASKAGQ-KVSFYMRKGADVLSKWVGEAERQLKLLFEEAQRNQPSIIFFDEIDGLAPVR 493
G+ KV + ++ S GE+E +++ LF A P IIF DEID +AP R
Sbjct: 272 ------GELKVPLFAISATEITSGVSGESEARVRTLFSNAIAQAPCIIFIDEIDAIAPKR 325
Query: 494 SSKQEQIHNSIVSTLLALMDGLD 516
S + + IVS LL MD L+
Sbjct: 326 ESASKDMERRIVSQLLTCMDSLN 348
Score = 154 (59.3 bits), Expect = 2.8e-29, Sum P(5) = 2.8e-29
Identities = 37/98 (37%), Positives = 58/98 (59%)
Query: 518 RGQVVLIGATNRVDAIDGALRRPGRFDREFNFPLPGCEARAEILDIHTRKWKQPPSRELK 577
+G V++IGATNR +++D ALR GRFD+E +P AR +IL + T K + + + +
Sbjct: 400 KGHVIVIGATNRPESLDTALRIGGRFDKEICLGIPDQTARCKILKVITSKMRLENNFDYE 459
Query: 578 SELAASCVGYCGADLKALCTEAAIRAFREKYPQVYTSD 615
E+A GY GAD+ L EAA + +++TS+
Sbjct: 460 -EIATLTPGYVGADINLLVKEAATNSVN----RIFTSN 492
Score = 58 (25.5 bits), Expect = 2.8e-29, Sum P(5) = 2.8e-29
Identities = 18/69 (26%), Positives = 34/69 (49%)
Query: 706 LLLCGSEGTGVDHLGPAILHELEKFPVHSLGLPALLSDPSAKTPEEALVHIFGEARRTTP 765
+L+ G G G L AI E + + G P LL+ ++ E A+ +F A ++P
Sbjct: 603 VLMYGPPGCGKTLLAKAIASECQANFISVKG-PELLNKYVGES-ERAVRQVFQRAAASSP 660
Query: 766 SILYIPQFN 774
+++ +F+
Sbjct: 661 CVIFFDEFD 669
Score = 41 (19.5 bits), Expect = 3.8e-35, Sum P(3) = 3.8e-35
Identities = 7/25 (28%), Positives = 13/25 (52%)
Query: 169 GSSEEKVGQDETENGNESDNDADDG 193
G++ + + NGN DN+ +G
Sbjct: 184 GNNVFQFSNNNNNNGNNKDNNLSNG 208
Score = 38 (18.4 bits), Expect = 3.8e-35, Sum P(3) = 3.8e-35
Identities = 7/20 (35%), Positives = 11/20 (55%)
Query: 855 EGRSKKPQESVSLPELPKVP 874
+ R KKP S ++P +P
Sbjct: 837 KSRDKKPNNSNNIPITNNIP 856
>CGD|CAL0002261 [details] [associations]
symbol:RPT5 species:5476 "Candida albicans" [GO:0008540
"proteasome regulatory particle, base subcomplex" evidence=IEA]
[GO:0005829 "cytosol" evidence=IEA] [GO:0070682 "proteasome
regulatory particle assembly" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0045899 "positive regulation of RNA polymerase II
transcriptional preinitiation complex assembly" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
CGD:CAL0002261 GO:GO:0005524 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 EMBL:AACQ01000086 EMBL:AACQ01000085 eggNOG:COG1222
TIGRFAMs:TIGR01242 KO:K03065 RefSeq:XP_715432.1 RefSeq:XP_715502.1
ProteinModelPortal:Q5A0X3 STRING:Q5A0X3 GeneID:3642858
GeneID:3642911 KEGG:cal:CaO19.10635 KEGG:cal:CaO19.3123
Uniprot:Q5A0X3
Length = 454
Score = 390 (142.3 bits), Expect = 3.9e-35, P = 3.9e-35
Identities = 95/244 (38%), Positives = 137/244 (56%)
Query: 367 IQPLQVDESVSFD--DIGGLSEYIDALKEMVFFPLLYPDFFASYHITPPRGVLLCGPPGT 424
++ ++VDE + D DIGGL + I+ L E V P+ D F + I PP+G L+ GPPGT
Sbjct: 186 VKAMEVDEKPTEDYSDIGGLDKQIEELIEAVVLPMKQADKFKNLGIKPPKGALMYGPPGT 245
Query: 425 GKTLIARALACAASKAGQKVSFYMRKGADVLSKWVGEAERQLKLLFEEAQRNQPSIIFFD 484
GKTL+ARA CAA ++G +F ++ ++G+ + ++ F A+ P+IIF D
Sbjct: 246 GKTLLARA--CAA-QSG--ATFLKLAAPQLVQMFIGDGAKLVRDAFALAKEKAPTIIFID 300
Query: 485 EIDGLAPVRSSKQEQIHNSIVSTLLALMDGLDSRG---QVVLIGATNRVDAIDGALRRPG 541
E+D + R + + T+L L++ LD G +V ++ ATNRVD +D AL R G
Sbjct: 301 ELDAIGTKRFDSDKSGDREVQRTMLELLNQLDGFGSDDRVKVLAATNRVDTLDPALLRSG 360
Query: 542 RFDREFNFPLPGCEARAEILDIHTRKWKQPPSRELKSELAASCVGYCGADLKALCTEAAI 601
R DR+ FPLP EAR +L IH RK + ELA S + GA LKA+ EA +
Sbjct: 361 RLDRKIEFPLPSEEARESVLKIHARKLHCDNNSVNWRELARSTDEFNGAQLKAVTVEAGM 420
Query: 602 RAFR 605
A R
Sbjct: 421 IALR 424
>WB|WBGene00004503 [details] [associations]
symbol:rpt-3 species:6239 "Caenorhabditis elegans"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0006310 "DNA recombination" evidence=IEA]
[GO:0009378 "four-way junction helicase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=IEA] [GO:0009792 "embryo
development ending in birth or egg hatching" evidence=IMP]
[GO:0000003 "reproduction" evidence=IMP] [GO:0002119 "nematode
larval development" evidence=IMP] [GO:0008340 "determination of
adult lifespan" evidence=IMP] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0008340
GO:GO:0009792 GO:GO:0005737 GO:GO:0002119 GO:GO:0000003
GO:GO:0030163 GO:GO:0000502 GO:GO:0017111 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 KO:K03063 OMA:DQTTNVK
EMBL:FO081210 PIR:A88485 RefSeq:NP_498429.1
ProteinModelPortal:P46502 SMR:P46502 DIP:DIP-24412N IntAct:P46502
MINT:MINT-212949 STRING:P46502 PaxDb:P46502
EnsemblMetazoa:F23F12.6.1 EnsemblMetazoa:F23F12.6.2 GeneID:175925
KEGG:cel:CELE_F23F12.6 UCSC:F23F12.6.1 CTD:175925 WormBase:F23F12.6
GeneTree:ENSGT00550000074962 InParanoid:P46502 NextBio:890338
Uniprot:P46502
Length = 414
Score = 390 (142.3 bits), Expect = 3.9e-35, P = 3.9e-35
Identities = 96/256 (37%), Positives = 135/256 (52%)
Query: 365 ADIQPLQVDES--VSFDDIGGLSEYIDALKEMVFFPLLYPDFFASYHITPPRGVLLCGPP 422
+ IQ L+ DE +S+ DIGGL ++E V PL + + + I PPRGVL+ GPP
Sbjct: 145 SSIQMLRPDEKPDISYGDIGGLDMQKQEVREAVELPLTHGELYQQIGIDPPRGVLMYGPP 204
Query: 423 GTGKTLIARALACAASKAGQKVSFYMRKGADVLSKWVGEAERQLKLLFEEAQRNQPSIIF 482
G GKT++A+A+A A SF G++ + K++GE R ++ +F A+ N PSIIF
Sbjct: 205 GCGKTMLAKAVA-----ANTAASFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENSPSIIF 259
Query: 483 FDEIDGLAPVRSSKQEQIHNSIVSTLLAL---MDGLDSRGQVVLIGATNRVDAIDGALRR 539
DEID +A R Q + LL L MDG D V +I ATNR D +D AL R
Sbjct: 260 IDEIDAIATKRFDAQTGADREVQRILLELLNQMDGFDQSTNVKVIMATNRQDTLDPALLR 319
Query: 540 PGRFDREFNFPLPGCEARAEILDIHTRKWKQPPSRELKSELAASCVGYCGADLKALCTEA 599
PGR DR+ FPLP + + + +L+ +A GAD+ ++C EA
Sbjct: 320 PGRLDRKIEFPLPDRRQKRLVFSTVCSRMNLSDDVDLEDWVARPDK-ISGADINSICQEA 378
Query: 600 AIRAFREKYPQVYTSD 615
++A RE V T D
Sbjct: 379 GMQAVRENRYVVLTKD 394
>WB|WBGene00004505 [details] [associations]
symbol:rpt-5 species:6239 "Caenorhabditis elegans"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0006310 "DNA recombination" evidence=IEA]
[GO:0009378 "four-way junction helicase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=IEA] [GO:0009792 "embryo
development ending in birth or egg hatching" evidence=IMP]
[GO:0000003 "reproduction" evidence=IMP] [GO:0002119 "nematode
larval development" evidence=IMP] [GO:0008340 "determination of
adult lifespan" evidence=IMP] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0008340 GO:GO:0009792
GO:GO:0005737 GO:GO:0002119 GO:GO:0000003 GO:GO:0030163 HSSP:Q01853
GO:GO:0017111 GeneTree:ENSGT00560000077230 EMBL:FO080337
eggNOG:COG1222 TIGRFAMs:TIGR01242 KO:K03065 HOGENOM:HOG000225143
OMA:GALMYGP PIR:T33155 RefSeq:NP_491672.1 ProteinModelPortal:O76371
SMR:O76371 IntAct:O76371 MINT:MINT-211164 STRING:O76371
PaxDb:O76371 EnsemblMetazoa:F56H1.4.1 EnsemblMetazoa:F56H1.4.2
GeneID:172238 KEGG:cel:CELE_F56H1.4 UCSC:F56H1.4.2 CTD:172238
WormBase:F56H1.4 InParanoid:O76371 NextBio:874627 Uniprot:O76371
Length = 430
Score = 390 (142.3 bits), Expect = 3.9e-35, P = 3.9e-35
Identities = 89/255 (34%), Positives = 139/255 (54%)
Query: 367 IQPLQVDE--SVSFDDIGGLSEYIDALKEMVFFPLLYPDFFASYHITPPRGVLLCGPPGT 424
++ ++VDE + + DIGG + I L E V P+ + D F + I PP+GVL+ GPPGT
Sbjct: 163 VKAMEVDERPTEQYSDIGGCDKQIQELIEAVVLPMTHKDRFVNLGIHPPKGVLMYGPPGT 222
Query: 425 GKTLIARALACAASKAGQKVSFYMRKGADVLSKWVGEAERQLKLLFEEAQRNQPSIIFFD 484
GKT++ARA+A A K +F G ++ ++G+ + ++ F A+ P+IIF D
Sbjct: 223 GKTMMARAVA-----AQTKSTFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPAIIFID 277
Query: 485 EIDGLAPVRSSKQEQIHNSIVSTLLALM---DGLDSRGQVVLIGATNRVDAIDGALRRPG 541
E+D + R ++ + T+L L+ DG + +I ATNR+D +D AL R G
Sbjct: 278 ELDAIGTKRFDSEKAGDREVQRTMLELLNQLDGFQPNDDIKVIAATNRIDVLDPALLRSG 337
Query: 542 RFDREFNFPLPGCEARAEILDIHTRKWKQPPSRELKSELAASCVG-YCGADLKALCTEAA 600
R DR+ P P +ARA I+ IH+RK ++++ E A C + GA KA+C EA
Sbjct: 338 RLDRKIELPHPNEDARARIMQIHSRKMNV--NKDVNFEELARCTDDFNGAQCKAVCVEAG 395
Query: 601 IRAFREKYPQVYTSD 615
+ A R ++ D
Sbjct: 396 MIALRRDATEILHED 410
>UNIPROTKB|O76371 [details] [associations]
symbol:rpt-5 "Protein RPT-5" species:6239 "Caenorhabditis
elegans" [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0008340 GO:GO:0009792 GO:GO:0005737
GO:GO:0002119 GO:GO:0000003 GO:GO:0030163 HSSP:Q01853 GO:GO:0017111
GeneTree:ENSGT00560000077230 EMBL:FO080337 eggNOG:COG1222
TIGRFAMs:TIGR01242 KO:K03065 HOGENOM:HOG000225143 OMA:GALMYGP
PIR:T33155 RefSeq:NP_491672.1 ProteinModelPortal:O76371 SMR:O76371
IntAct:O76371 MINT:MINT-211164 STRING:O76371 PaxDb:O76371
EnsemblMetazoa:F56H1.4.1 EnsemblMetazoa:F56H1.4.2 GeneID:172238
KEGG:cel:CELE_F56H1.4 UCSC:F56H1.4.2 CTD:172238 WormBase:F56H1.4
InParanoid:O76371 NextBio:874627 Uniprot:O76371
Length = 430
Score = 390 (142.3 bits), Expect = 3.9e-35, P = 3.9e-35
Identities = 89/255 (34%), Positives = 139/255 (54%)
Query: 367 IQPLQVDE--SVSFDDIGGLSEYIDALKEMVFFPLLYPDFFASYHITPPRGVLLCGPPGT 424
++ ++VDE + + DIGG + I L E V P+ + D F + I PP+GVL+ GPPGT
Sbjct: 163 VKAMEVDERPTEQYSDIGGCDKQIQELIEAVVLPMTHKDRFVNLGIHPPKGVLMYGPPGT 222
Query: 425 GKTLIARALACAASKAGQKVSFYMRKGADVLSKWVGEAERQLKLLFEEAQRNQPSIIFFD 484
GKT++ARA+A A K +F G ++ ++G+ + ++ F A+ P+IIF D
Sbjct: 223 GKTMMARAVA-----AQTKSTFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPAIIFID 277
Query: 485 EIDGLAPVRSSKQEQIHNSIVSTLLALM---DGLDSRGQVVLIGATNRVDAIDGALRRPG 541
E+D + R ++ + T+L L+ DG + +I ATNR+D +D AL R G
Sbjct: 278 ELDAIGTKRFDSEKAGDREVQRTMLELLNQLDGFQPNDDIKVIAATNRIDVLDPALLRSG 337
Query: 542 RFDREFNFPLPGCEARAEILDIHTRKWKQPPSRELKSELAASCVG-YCGADLKALCTEAA 600
R DR+ P P +ARA I+ IH+RK ++++ E A C + GA KA+C EA
Sbjct: 338 RLDRKIELPHPNEDARARIMQIHSRKMNV--NKDVNFEELARCTDDFNGAQCKAVCVEAG 395
Query: 601 IRAFREKYPQVYTSD 615
+ A R ++ D
Sbjct: 396 MIALRRDATEILHED 410
>FB|FBgn0028686 [details] [associations]
symbol:Rpt3 "Regulatory particle triple-A ATPase 3"
species:7227 "Drosophila melanogaster" [GO:0008540 "proteasome
regulatory particle, base subcomplex" evidence=ISS;NAS] [GO:0004175
"endopeptidase activity" evidence=IDA] [GO:0006508 "proteolysis"
evidence=ISS;IDA] [GO:0005838 "proteasome regulatory particle"
evidence=ISS;IDA] [GO:0001673 "male germ cell nucleus"
evidence=IDA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0006974 "response to DNA damage stimulus"
evidence=IMP] InterPro:IPR001270 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PRINTS:PR00300 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005737 EMBL:AE014298 GO:GO:0006508
GO:GO:0006974 GO:GO:0016887 GO:GO:0004175 GO:GO:0001673
GO:GO:0030163 HSSP:Q01853 eggNOG:COG1222 TIGRFAMs:TIGR01242
GO:GO:0008540 BRENDA:3.4.25.1 KO:K03063 OMA:DQTTNVK
GeneTree:ENSGT00550000074962 EMBL:AF145306 EMBL:BT046144
EMBL:FN544098 EMBL:FN544099 EMBL:FN544100 EMBL:FN544101
EMBL:FN544102 EMBL:FN544103 EMBL:FN544104 EMBL:FN544105
EMBL:FN544106 EMBL:FN544108 RefSeq:NP_572686.1 UniGene:Dm.8238
SMR:Q9V405 STRING:Q9V405 EnsemblMetazoa:FBtr0073436 GeneID:32047
KEGG:dme:Dmel_CG16916 UCSC:CG16916-RA CTD:32047 FlyBase:FBgn0028686
InParanoid:Q9V405 OrthoDB:EOG4P5HRH GenomeRNAi:32047 NextBio:776548
Uniprot:Q9V405
Length = 413
Score = 388 (141.6 bits), Expect = 6.4e-35, P = 6.4e-35
Identities = 97/256 (37%), Positives = 133/256 (51%)
Query: 365 ADIQPLQVDES--VSFDDIGGLSEYIDALKEMVFFPLLYPDFFASYHITPPRGVLLCGPP 422
+ I LQ DE VS+ DIGG+ ++E V PL + + + I PPRGVL+ GPP
Sbjct: 144 SSISMLQPDEKPDVSYADIGGMDMQKQEIREAVELPLTHFELYKQIGIDPPRGVLMYGPP 203
Query: 423 GTGKTLIARALACAASKAGQKVSFYMRKGADVLSKWVGEAERQLKLLFEEAQRNQPSIIF 482
G GKT++A+A+A + SF G++ + K++GE R ++ +F A+ N P+IIF
Sbjct: 204 GCGKTMLAKAVAHHTT-----ASFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIF 258
Query: 483 FDEIDGLAPVRSSKQEQIHNSIVSTLLAL---MDGLDSRGQVVLIGATNRVDAIDGALRR 539
DEID +A R Q + LL L MDG D V +I ATNR D +D AL R
Sbjct: 259 IDEIDAIATKRFDAQTGADREVQRILLELLNQMDGFDQTTNVKVIMATNRADTLDPALLR 318
Query: 540 PGRFDREFNFPLPGCEARAEILDIHTRKWKQPPSRELKSELAASCVGYCGADLKALCTEA 599
PGR DR+ FPLP + + T K +L+ E A GAD+ A+C EA
Sbjct: 319 PGRLDRKIEFPLPDRRQKRLVFSTITSKMNLSEDVDLE-EFVARPDKISGADINAICQEA 377
Query: 600 AIRAFREKYPQVYTSD 615
+ A RE V D
Sbjct: 378 GMHAVRENRYIVLAKD 393
>UNIPROTKB|F1MWE0 [details] [associations]
symbol:PSMC3 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0022624 "proteasome accessory complex" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0001824 "blastocyst development" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 GeneTree:ENSGT00560000077230 GO:GO:0001824
TIGRFAMs:TIGR01242 OMA:GALMYGP EMBL:DAAA02041602 IPI:IPI00701790
UniGene:Bt.49089 Ensembl:ENSBTAT00000028983 NextBio:20868523
Uniprot:F1MWE0
Length = 456
Score = 388 (141.6 bits), Expect = 6.4e-35, P = 6.4e-35
Identities = 98/260 (37%), Positives = 140/260 (53%)
Query: 360 SSKGGADIQPLQVDESVSFDDIGGLSEYIDALKEMVFFPLLYPDFFASYHITPPRGVLLC 419
S GG D Q +V E+ + LS +L E + P+ + + F + I PP+GVL+
Sbjct: 187 SDIGGLDKQIQEVREARHLTSLLCLSA---SLVEAIVLPMNHKEKFENLGIQPPKGVLMY 243
Query: 420 GPPGTGKTLIARALACAASKAGQKVSFYMRKGADVLSKWVGEAERQLKLLFEEAQRNQPS 479
GPPGTGKTL+ARA CAA K +F G ++ ++G+ + ++ F A+ PS
Sbjct: 244 GPPGTGKTLLARA--CAAQT---KATFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPS 298
Query: 480 IIFFDEIDGLAPVRSSKQEQIHNSIVSTLLALM---DGLDSRGQVVLIGATNRVDAIDGA 536
IIF DE+D + R ++ + T+L L+ DG QV +I ATNRVD +D A
Sbjct: 299 IIFIDELDAIGTKRFDSEKAGDREVQRTMLELLNQLDGFQPNTQVKVIAATNRVDILDPA 358
Query: 537 LRRPGRFDREFNFPLPGCEARAEILDIHTRKWKQPPSRELKSELAASCVGYCGADLKALC 596
L R GR DR+ FP+P EARA I+ IH+RK P + ELA + GA KA+C
Sbjct: 359 LLRSGRLDRKIEFPMPNEEARARIMQIHSRKMNVSPDVNYE-ELARCTDDFNGAQCKAVC 417
Query: 597 TEAAIRAFREKYPQVYTSDD 616
EA + A R ++ T +D
Sbjct: 418 VEAGMIALRRGATEL-THED 436
>UNIPROTKB|E2QY79 [details] [associations]
symbol:NVL "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0017111 GeneTree:ENSGT00570000079239 EMBL:AAEX03005293
EMBL:AAEX03005294 EMBL:AAEX03005295 EMBL:AAEX03005296
Ensembl:ENSCAFT00000025949 NextBio:20855189 Uniprot:E2QY79
Length = 851
Score = 420 (152.9 bits), Expect = 6.5e-35, Sum P(2) = 6.5e-35
Identities = 105/283 (37%), Positives = 161/283 (56%)
Query: 375 SVSFDDIGGLSEYIDALKEMVFFPLLYPDFFASYHITPPRGVLLCGPPGTGKTLIARALA 434
SV++ DIG L + + L + P+ P+ F + + P GVLL GPPG GKTL+A+A+A
Sbjct: 571 SVTWADIGALEDIREELTMAILAPVRSPEQFRALGLMTPAGVLLAGPPGCGKTLLAKAVA 630
Query: 435 CAASKAGQKVSFYMRKGADVLSKWVGEAERQLKLLFEEAQRNQPSIIFFDEIDGLAPVRS 494
+++G ++F KG ++L+ +VGE+ER ++ +F+ A+ + P +IFFDE+D L P RS
Sbjct: 631 ---NESG--LNFISVKGPELLNMYVGESERAVRQVFQRARSSAPCVIFFDEVDALCPRRS 685
Query: 495 SKQEQIHNSIVSTLLALMDGLDSRGQVVLIGATNRVDAIDGALRRPGRFDREFNFPLPGC 554
++ +V+ LL MDGL++R QV ++ ATNR D ID A+ RPGR D+ LP
Sbjct: 686 DRETGASVRVVNQLLTEMDGLEARQQVFIMAATNRPDIIDPAILRPGRLDKTLFVGLPPP 745
Query: 555 EARAEILDIHTRKWKQPP-SRELKSE-LAAS--CVGYCGADLKALCTEAAIRAFREKYPQ 610
R IL T+ +PP ++ E LAA C Y GADL AL EA+I A R++ +
Sbjct: 746 ADRLAILKTITKNGTRPPLDADVNLEALAADLRCDCYSGADLSALVREASICALRQEMMR 805
Query: 611 VYTSDDKFLIDVDSVTVEKYHFIEAMSTITPA-AHRGATVHSR 652
D+ + V + HF EA + + + +G + R
Sbjct: 806 PKGGGDR-----GELKVSQKHFEEAFKKVKSSISKKGVCLFHR 843
Score = 387 (141.3 bits), Expect = 2.0e-32, Sum P(3) = 2.0e-32
Identities = 96/237 (40%), Positives = 136/237 (57%)
Query: 370 LQVDESVSFDDIGGLSEYIDALKEMVFFPLLYPDFFASYHITPPRGVLLCGPPGTGKTLI 429
LQV V F+D+GG + + +M+ + +P+ + PPRGVLL GPPG GKTL+
Sbjct: 251 LQVSR-VKFEDVGGNDATLKEVCKMLIH-MRHPEVYHHLGAVPPRGVLLHGPPGCGKTLL 308
Query: 430 ARALACAASKAGQKVSFYMRKGADVLSKWVGEAERQLKLLFEEAQRNQPSIIFFDEIDGL 489
A A+A KV+ +V+S GE+E++L+ LFE+A N P ++F DEID +
Sbjct: 309 AHAIAGELDLPILKVA-----ATEVVSGVSGESEQKLRELFEQAVSNAPCVLFIDEIDAI 363
Query: 490 APVRSSKQEQIHNSIVSTLLALMDGLDSRG---QVVLIGATNRVDAIDGALRRPGRFDRE 546
P R + + IV+ LL MD L++ +V++IGATNR D++D ALRR GRFDRE
Sbjct: 364 TPKREVASKDMERRIVAQLLTCMDDLNTTAATARVLVIGATNRPDSLDPALRRAGRFDRE 423
Query: 547 FNFPLPGCEARAEILDIHTRKWKQPPSRELKSELAASCVGYCGADLKALCTEAAIRA 603
+P +R IL RK + P + + LA G+ GADL ALC EAA+ A
Sbjct: 424 ICLGIPDEASRERILQTLCRKLRLPETFPFR-HLAHLTPGFVGADLMALCREAAMCA 479
Score = 55 (24.4 bits), Expect = 2.0e-32, Sum P(3) = 2.0e-32
Identities = 20/76 (26%), Positives = 36/76 (47%)
Query: 697 AIPLVYRPRLLLCGSEGTGVDHLGPAILHELEKFPVHSLGLPALLSDPSAKTPEEALVHI 756
A+ L+ +LL G G G L A+ +E + G P LL+ ++ E A+ +
Sbjct: 603 ALGLMTPAGVLLAGPPGCGKTLLAKAVANESGLNFISVKG-PELLNMYVGES-ERAVRQV 660
Query: 757 FGEARRTTPSILYIPQ 772
F AR + P +++ +
Sbjct: 661 FQRARSSAPCVIFFDE 676
Score = 39 (18.8 bits), Expect = 6.5e-35, Sum P(2) = 6.5e-35
Identities = 15/52 (28%), Positives = 23/52 (44%)
Query: 6 SGQGDGSVPGPVRTSDR---LRRRPK-ILGRTYLYYNPIRPRKSKTKARTAA 53
SG G G + P R S+ + R P +G T N +P K ++ A+
Sbjct: 155 SGTGSGPLKAPARASEGGWFIDRTPAGKMGLTDEKSNHKQPGSEKEDSKDAS 206
>UNIPROTKB|O75351 [details] [associations]
symbol:VPS4B "Vacuolar protein sorting-associated protein
4B" species:9606 "Homo sapiens" [GO:0007049 "cell cycle"
evidence=IEA] [GO:0015031 "protein transport" evidence=IEA]
[GO:0051301 "cell division" evidence=IEA] [GO:0006813 "potassium
ion transport" evidence=IEA] [GO:0007032 "endosome organization"
evidence=IEA] [GO:0031902 "late endosome membrane" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=IDA;IMP] [GO:0005764
"lysosome" evidence=IDA] [GO:0005769 "early endosome" evidence=IDA]
[GO:0005770 "late endosome" evidence=IDA] [GO:0016197 "endosomal
transport" evidence=IDA;IMP;TAS] [GO:0006200 "ATP catabolic
process" evidence=IMP] [GO:0005524 "ATP binding" evidence=IMP]
[GO:0005515 "protein binding" evidence=IPI] [GO:0032510 "endosome
to lysosome transport via multivesicular body sorting pathway"
evidence=IMP] [GO:0033993 "response to lipid" evidence=IDA]
[GO:0010008 "endosome membrane" evidence=IDA] [GO:0008022 "protein
C-terminus binding" evidence=IPI] [GO:0042623 "ATPase activity,
coupled" evidence=NAS] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0005829 "cytosol"
evidence=IDA;TAS] [GO:0005774 "vacuolar membrane" evidence=IDA]
[GO:0032367 "intracellular cholesterol transport" evidence=IMP]
[GO:0005768 "endosome" evidence=IDA] [GO:0016044 "cellular membrane
organization" evidence=TAS] Reactome:REACT_11123 InterPro:IPR007330
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005829
GO:GO:0005524 GO:GO:0005634 GO:GO:0005774 GO:GO:0051301
GO:GO:0031902 GO:GO:0015031 GO:GO:0005764 GO:GO:0032367
GO:GO:0010008 GO:GO:0005770 GO:GO:0006813 GO:GO:0033993
GO:GO:0007049 Pfam:PF04212 eggNOG:COG0464 GO:GO:0007032
InterPro:IPR015415 Pfam:PF09336 GO:GO:0005769 GO:GO:0016044
HOVERGEN:HBG057074 GO:GO:0042623 EMBL:CH471096 SMART:SM00745
PDB:2JQK PDBsum:2JQK HOGENOM:HOG000225146 GO:GO:0032510 KO:K12196
OrthoDB:EOG4G1MGD CTD:9525 OMA:AKCAEYL EMBL:AF195514 EMBL:AF282904
EMBL:AF038960 EMBL:AY232629 EMBL:BC039574 IPI:IPI00182728
RefSeq:NP_004860.2 UniGene:Hs.126550 PDB:1WR0 PDB:1XWI PDB:2CPT
PDB:2JQH PDBsum:1WR0 PDBsum:1XWI PDBsum:2CPT PDBsum:2JQH
ProteinModelPortal:O75351 SMR:O75351 IntAct:O75351 STRING:O75351
PhosphoSite:O75351 PaxDb:O75351 PeptideAtlas:O75351 PRIDE:O75351
DNASU:9525 Ensembl:ENST00000238497 GeneID:9525 KEGG:hsa:9525
UCSC:uc002lix.3 GeneCards:GC18M061056 HGNC:HGNC:10895 HPA:CAB046445
MIM:609983 neXtProt:NX_O75351 PharmGKB:PA35795 InParanoid:O75351
PhylomeDB:O75351 EvolutionaryTrace:O75351 GenomeRNAi:9525
NextBio:35700 Bgee:O75351 CleanEx:HS_VPS4B Genevestigator:O75351
GermOnline:ENSG00000119541 Uniprot:O75351
Length = 444
Score = 374 (136.7 bits), Expect = 6.8e-35, Sum P(2) = 6.8e-35
Identities = 86/234 (36%), Positives = 134/234 (57%)
Query: 375 SVSFDDIGGLSEYIDALKEMVFFPLLYPDFFASYHITPPRGVLLCGPPGTGKTLIARALA 434
+V + D+ GL +ALKE V P+ +P F TP RG+LL GPPGTGK+ +A+A+A
Sbjct: 130 NVKWSDVAGLEGAKEALKEAVILPIKFPHLFTGKR-TPWRGILLFGPPGTGKSYLAKAVA 188
Query: 435 CAASKAGQKVSFYMRKGADVLSKWVGEAERQLKLLFEEAQRNQPSIIFFDEIDGLAPVRS 494
A+ + +F+ +D++SKW+GE+E+ +K LF+ A+ N+PSIIF DEID L RS
Sbjct: 189 TEANNS----TFFSISSSDLVSKWLGESEKLVKNLFQLARENKPSIIFIDEIDSLCGSRS 244
Query: 495 SKQEQIHNSIVSTLLALMDGL--DSRGQVVLIGATNRVDAIDGALRRPGRFDREFNFPLP 552
+ + I + L M G+ D+ G ++++GATN +D A+RR RF++ PLP
Sbjct: 245 ENESEAARRIKTEFLVQMQGVGVDNDG-ILVLGATNIPWVLDSAIRR--RFEKRIYIPLP 301
Query: 553 GCEARAEILDIHTRKWKQPPSRELKSELAASCVGYCGADLKALCTEAAIRAFRE 606
ARA + +H + + EL GY GAD+ + +A ++ R+
Sbjct: 302 EPHARAAMFKLHLGTTQNSLTEADFRELGRKTDGYSGADISIIVRDALMQPVRK 355
Score = 40 (19.1 bits), Expect = 6.8e-35, Sum P(2) = 6.8e-35
Identities = 15/65 (23%), Positives = 30/65 (46%)
Query: 137 EAKPTPRREGLRPRRSMVATR-KQLN--LDSGDEQGSSEEKVGQDET--ENGNESDNDAD 191
EA+ ++ +R + + R ++L L + +++ K GQ E GN+SD + +
Sbjct: 48 EAQGDKAKQSIRAKCTEYLDRAEKLKEYLKNKEKKAQKPVKEGQPSPADEKGNDSDGEGE 107
Query: 192 DGQNE 196
E
Sbjct: 108 SDDPE 112
>POMBASE|SPAC17A5.01 [details] [associations]
symbol:pex6 "peroxin-6 (predicted)" species:4896
"Schizosaccharomyces pombe" [GO:0005524 "ATP binding" evidence=IC]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005777 "peroxisome"
evidence=ISO] [GO:0005778 "peroxisomal membrane" evidence=IEA]
[GO:0005829 "cytosol" evidence=IDA] [GO:0007031 "peroxisome
organization" evidence=ISO] [GO:0016887 "ATPase activity"
evidence=ISO] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
PomBase:SPAC17A5.01 GO:GO:0005829 GO:GO:0005524 GO:GO:0005634
EMBL:CU329670 GO:GO:0005777 GenomeReviews:CU329670_GR GO:GO:0007031
GO:GO:0016887 GO:GO:0005778 eggNOG:COG0464 KO:K13339 PIR:T37816
RefSeq:NP_593468.1 ProteinModelPortal:O13764
EnsemblFungi:SPAC17A5.01.1 GeneID:2542437 KEGG:spo:SPAC17A5.01
OrthoDB:EOG48PQTF NextBio:20803494 Uniprot:O13764
Length = 948
Score = 412 (150.1 bits), Expect = 8.1e-35, Sum P(2) = 8.1e-35
Identities = 96/242 (39%), Positives = 151/242 (62%)
Query: 376 VSFDDIGGLSEYIDALKEMVFFPLLYPDFFASYHITPPRGVLLCGPPGTGKTLIARALAC 435
V++DDIGGL E L++ + PL +P+ F S + P GVLL GPPGTGKTL+A+A+A
Sbjct: 652 VNWDDIGGLEEAKTVLRDTLQLPLQFPELF-SQGLKPRSGVLLYGPPGTGKTLLAKAVAT 710
Query: 436 AASKAGQKVSFYMRKGADVLSKWVGEAERQLKLLFEEAQRNQPSIIFFDEIDGLAPVR-- 493
S + F KG ++L+ +VGE+E ++ +FE+A+ + P +IFFDE+D +AP R
Sbjct: 711 ELS-----LEFVSIKGPELLNMYVGESEANVRNVFEKARNSSPCVIFFDELDSIAPHRGN 765
Query: 494 SSKQEQIHNSIVSTLLALMDGL--DSRGQVVLIGATNRVDAIDGALRRPGRFDREFNFPL 551
SS + + +VS LLA +D + D+ V +IGATNR D +D +L RPGRFD+ +
Sbjct: 766 SSDSGNVMDRVVSQLLAELDSISKDNNKYVFVIGATNRPDLLDPSLLRPGRFDKLVYLGI 825
Query: 552 PGCE-ARAEILDIHTRKWKQPPSRELKSELAASC-VGYCGADLKALCTEAAIRAFREKYP 609
E ++A +L T+ +K + +L +E+A +C + GAD+ ALC++A + A + K
Sbjct: 826 NKSEESKASMLRALTKTFKLDETIDL-NEIAKNCHPNFTGADMYALCSDAVLSAIKRKTN 884
Query: 610 QV 611
++
Sbjct: 885 EI 886
Score = 49 (22.3 bits), Expect = 8.1e-35, Sum P(2) = 8.1e-35
Identities = 13/46 (28%), Positives = 20/46 (43%)
Query: 40 IRPRKSKTKARTAASQIARMFGPGKRTVRTSNKNSVPLNLRRSTRK 85
IRP K T+ + + + P + KN P++LR S K
Sbjct: 183 IRPSKVHTEIQWCLQNCSLIHVPFELLFNVGKKNGCPISLRLSDGK 228
>CGD|CAL0001067 [details] [associations]
symbol:orf19.4362 species:5476 "Candida albicans" [GO:0005741
"mitochondrial outer membrane" evidence=IEA] [GO:0006626 "protein
targeting to mitochondrion" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 CGD:CAL0001067 GO:GO:0005524 eggNOG:COG0464
GO:GO:0017111 HOGENOM:HOG000225141 EMBL:AACQ01000091
EMBL:AACQ01000090 RefSeq:XP_715087.1 RefSeq:XP_715138.1
ProteinModelPortal:Q5A026 GeneID:3643190 GeneID:3643254
KEGG:cal:CaO19.11840 KEGG:cal:CaO19.4362 Uniprot:Q5A026
Length = 369
Score = 387 (141.3 bits), Expect = 8.2e-35, P = 8.2e-35
Identities = 91/241 (37%), Positives = 136/241 (56%)
Query: 375 SVSFDDIGGLSEYIDALKEMVFFPLLYPDFFASYH--ITPPRGVLLCGPPGTGKTLIARA 432
+V+FDDIGGLS+ ID L+E V PL P+ FA++ I P+GVL GPPG GKT++A+A
Sbjct: 94 AVTFDDIGGLSDIIDELREAVILPLTEPELFAAHSSLIQSPKGVLFYGPPGCGKTMLAKA 153
Query: 433 LACAASKAGQKVSFYMR-KGADVLSKWVGEAERQLKLLFEEAQRNQPSIIFFDEIDGLAP 491
+A ++G +F++ + + ++ KW GE+ + +F A + QP IIF DEID
Sbjct: 154 IA---KESG---AFFLSIRMSSIMDKWYGESNKITDAIFSLANKLQPCIIFIDEIDSFLR 207
Query: 492 VRSSKQEQIHNSIVSTLLALMDGLDSRGQVVLIGATNRVDAIDGALRRPGRFDREFNFPL 551
RSS ++ + + + L DGL S GQ++++GATNR + ID A R R + F
Sbjct: 208 DRSSNDHEVSAMLKAEFMTLWDGLKSNGQIMVLGATNRKNDIDEAFLR--RMPKTFAIGK 265
Query: 552 PGCEARAEILDIHTRKWKQPPSRELKSELAASCVGYCGADLKALCTEAAIRAFREKYPQV 611
P R IL+ + K + + A+ G+ G+DL+ LC EAAI RE +
Sbjct: 266 PNASQRTAILNKILKDAKLDENDFDLEYIVANTRGFSGSDLRELCREAAILPVREYIKEN 325
Query: 612 Y 612
Y
Sbjct: 326 Y 326
>UNIPROTKB|J9P5D7 [details] [associations]
symbol:NVL "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0017111 OMA:NDMTLKE GeneTree:ENSGT00570000079239
EMBL:AAEX03005293 EMBL:AAEX03005294 EMBL:AAEX03005295
EMBL:AAEX03005296 Ensembl:ENSCAFT00000049264 Uniprot:J9P5D7
Length = 855
Score = 419 (152.6 bits), Expect = 8.7e-35, Sum P(2) = 8.7e-35
Identities = 103/269 (38%), Positives = 155/269 (57%)
Query: 375 SVSFDDIGGLSEYIDALKEMVFFPLLYPDFFASYHITPPRGVLLCGPPGTGKTLIARALA 434
SV++ DIG L + + L + P+ P+ F + + P GVLL GPPG GKTL+A+A+A
Sbjct: 576 SVTWADIGALEDIREELTMAILAPVRSPEQFRALGLMTPAGVLLAGPPGCGKTLLAKAVA 635
Query: 435 CAASKAGQKVSFYMRKGADVLSKWVGEAERQLKLLFEEAQRNQPSIIFFDEIDGLAPVRS 494
+++G ++F KG ++L+ +VGE+ER ++ +F+ A+ + P +IFFDE+D L P RS
Sbjct: 636 ---NESG--LNFISVKGPELLNMYVGESERAVRQVFQRARSSAPCVIFFDEVDALCPRRS 690
Query: 495 SKQEQIHNSIVSTLLALMDGLDSRGQVVLIGATNRVDAIDGALRRPGRFDREFNFPLPGC 554
++ +V+ LL MDGL++R QV ++ ATNR D ID A+ RPGR D+ LP
Sbjct: 691 DRETGASVRVVNQLLTEMDGLEARQQVFIMAATNRPDIIDPAILRPGRLDKTLFVGLPPP 750
Query: 555 EARAEILDIHTRKWKQPP-SRELKSE-LAAS--CVGYCGADLKALCTEAAIRAFREKYPQ 610
R IL T+ +PP ++ E LAA C Y GADL AL EA+I A R++ +
Sbjct: 751 ADRLAILKTITKNGTRPPLDADVNLEALAADLRCDCYSGADLSALVREASICALRQEMMR 810
Query: 611 VYTSDDKFLIDVDSVTVEKYHFIEAMSTI 639
D+ + V + HF EA +
Sbjct: 811 PKGGGDR-----GELKVSQKHFEEAFKKV 834
Score = 387 (141.3 bits), Expect = 2.1e-32, Sum P(3) = 2.1e-32
Identities = 96/237 (40%), Positives = 136/237 (57%)
Query: 370 LQVDESVSFDDIGGLSEYIDALKEMVFFPLLYPDFFASYHITPPRGVLLCGPPGTGKTLI 429
LQV V F+D+GG + + +M+ + +P+ + PPRGVLL GPPG GKTL+
Sbjct: 251 LQVSR-VKFEDVGGNDATLKEVCKMLIH-MRHPEVYHHLGAVPPRGVLLHGPPGCGKTLL 308
Query: 430 ARALACAASKAGQKVSFYMRKGADVLSKWVGEAERQLKLLFEEAQRNQPSIIFFDEIDGL 489
A A+A KV+ +V+S GE+E++L+ LFE+A N P ++F DEID +
Sbjct: 309 AHAIAGELDLPILKVA-----ATEVVSGVSGESEQKLRELFEQAVSNAPCVLFIDEIDAI 363
Query: 490 APVRSSKQEQIHNSIVSTLLALMDGLDSRG---QVVLIGATNRVDAIDGALRRPGRFDRE 546
P R + + IV+ LL MD L++ +V++IGATNR D++D ALRR GRFDRE
Sbjct: 364 TPKREVASKDMERRIVAQLLTCMDDLNTTAATARVLVIGATNRPDSLDPALRRAGRFDRE 423
Query: 547 FNFPLPGCEARAEILDIHTRKWKQPPSRELKSELAASCVGYCGADLKALCTEAAIRA 603
+P +R IL RK + P + + LA G+ GADL ALC EAA+ A
Sbjct: 424 ICLGIPDEASRERILQTLCRKLRLPETFPFR-HLAHLTPGFVGADLMALCREAAMCA 479
Score = 55 (24.4 bits), Expect = 2.1e-32, Sum P(3) = 2.1e-32
Identities = 20/76 (26%), Positives = 36/76 (47%)
Query: 697 AIPLVYRPRLLLCGSEGTGVDHLGPAILHELEKFPVHSLGLPALLSDPSAKTPEEALVHI 756
A+ L+ +LL G G G L A+ +E + G P LL+ ++ E A+ +
Sbjct: 608 ALGLMTPAGVLLAGPPGCGKTLLAKAVANESGLNFISVKG-PELLNMYVGES-ERAVRQV 665
Query: 757 FGEARRTTPSILYIPQ 772
F AR + P +++ +
Sbjct: 666 FQRARSSAPCVIFFDE 681
Score = 39 (18.8 bits), Expect = 8.7e-35, Sum P(2) = 8.7e-35
Identities = 15/52 (28%), Positives = 23/52 (44%)
Query: 6 SGQGDGSVPGPVRTSDR---LRRRPK-ILGRTYLYYNPIRPRKSKTKARTAA 53
SG G G + P R S+ + R P +G T N +P K ++ A+
Sbjct: 155 SGTGSGPLKAPARASEGGWFIDRTPAGKMGLTDEKSNHKQPGSEKEDSKDAS 206
>TAIR|locus:2044209 [details] [associations]
symbol:CDC48B "cell division cycle 48B" species:3702
"Arabidopsis thaliana" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005886
"plasma membrane" evidence=ISM] [GO:0016887 "ATPase activity"
evidence=ISS] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0009560 "embryo sac egg cell differentiation"
evidence=RCA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 EMBL:CP002685 GenomeReviews:CT485783_GR
GO:GO:0051301 GO:GO:0005856 GO:GO:0015031 GO:GO:0007049
eggNOG:COG0464 HOGENOM:HOG000223225 GO:GO:0017111 EMBL:AC006836
GO:GO:0009524 EMBL:AY062443 EMBL:BT008371 IPI:IPI00527776
PIR:A84451 RefSeq:NP_178463.1 UniGene:At.27340
ProteinModelPortal:Q9ZPR1 SMR:Q9ZPR1 PaxDb:Q9ZPR1 PRIDE:Q9ZPR1
EnsemblPlants:AT2G03670.1 GeneID:814895 KEGG:ath:AT2G03670
GeneFarm:1901 TAIR:At2g03670 InParanoid:Q9ZPR1 OMA:RECNAHL
PhylomeDB:Q9ZPR1 ProtClustDB:CLSN2683845 Genevestigator:Q9ZPR1
GermOnline:AT2G03670 Uniprot:Q9ZPR1
Length = 603
Score = 403 (146.9 bits), Expect = 8.7e-35, P = 8.7e-35
Identities = 110/307 (35%), Positives = 161/307 (52%)
Query: 358 GPSSKGGADIQPLQVDESVSFDDIGGLSEYIDALKEMVFFPLLYPDFFASYHITPPRGVL 417
GPS G ++ V++DD+GGL + L++ V +P+ + F I+P RG+L
Sbjct: 269 GPSINRGITVEI----PKVTWDDVGGLKDLKKKLQQAVEWPIKHSAAFVKMGISPMRGIL 324
Query: 418 LCGPPGTGKTLIARALACAASKAGQKVSFYMRKGADVLSKWVGEAERQLKLLFEEAQRNQ 477
L GPPG KT +A+A A AA + SF+ A++ S +VGE E L+ F+ A+
Sbjct: 325 LHGPPGCSKTTLAKAAANAA-----QASFFSLSCAELFSMYVGEGEALLRNTFQRARLAS 379
Query: 478 PSIIFFDEIDGLAPVR----SSKQEQIHNSIVSTLLALMDGLDSRGQVVLIGATNRVDAI 533
PSIIFFDE D +A R SS + ++STLL MDGL+ ++++ ATNR AI
Sbjct: 380 PSIIFFDEADVVACKRGDESSSNSSTVGERLLSTLLTEMDGLEEAKGILVLAATNRPYAI 439
Query: 534 DGALRRPGRFDREFNFPLPGCEARAEILDIHTRKWKQPPSRELKSELAASCVGYCGADLK 593
D AL RPGRFD P P EAR EIL +HTR +L+ ++A + GA+L+
Sbjct: 440 DAALMRPGRFDLVLYVPPPDLEARFEILQVHTRNMTLGDDVDLR-KIAEETDLFTGAELE 498
Query: 594 ALCTEAAIRAFREKYPQVYTSDDKFLIDVDSV----TVEKYHFIEAMSTITPAAHRGATV 649
LC E+ + RE + F S+ T+E+ +E S+ AA R
Sbjct: 499 GLCRESGTVSLRENIAATAVFNRHFQTAKSSLKPALTIEE---VETYSSFRKAAKRS--- 552
Query: 650 HSRPLSL 656
S+P+ +
Sbjct: 553 DSKPIPI 559
Score = 391 (142.7 bits), Expect = 3.7e-33, Sum P(2) = 3.7e-33
Identities = 109/277 (39%), Positives = 147/277 (53%)
Query: 380 DIGGLSEYIDALKEMVFFPLLYPDFFASYHITPPRGVLLCGPPGTGKTLIARALACAASK 439
+IGG + AL+E++ FP YP + + PRG+LL GPPGTGKT + RA+
Sbjct: 23 EIGGNERALQALRELIIFPFRYPLEARTLGLKWPRGLLLYGPPGTGKTSLVRAVVQECD- 81
Query: 440 AGQKVSFYMRKGADVLSKWVGEAERQLKLLFEEAQRN----QPSIIFFDEIDGLAPVRSS 495
+ V GE+E+ L+ F EA + +PS+IF DEID L P R +
Sbjct: 82 ----AHLIVLSPHSVHRAHAGESEKVLREAFAEASSHAVSDKPSVIFIDEIDVLCPRRDA 137
Query: 496 KQEQIHNSIVSTLLALMDG---LDSRGQVVLIGATNRVDAIDGALRRPGRFDREFNFPLP 552
++EQ I S L LMD S +VV++ +TNRVDAID ALRR GRFD P
Sbjct: 138 RREQ-DVRIASQLFTLMDSNKPSSSAPRVVVVASTNRVDAIDPALRRAGRFDALVEVSTP 196
Query: 553 GCEARAEILDIHTRKWKQPPSRELKSELAASCVGYCGADLKALCTEAAIRAFREKYPQVY 612
E R +IL ++T+K PS +L++ +A SC GY GADL+ALC EA I A +
Sbjct: 197 NEEDRLKILQLYTKKVNLDPSVDLQA-IAISCNGYVGADLEALCREATISASKR------ 249
Query: 613 TSDDKFLIDVDSVTVEKYHFIEAMSTITPAAHRGATV 649
+SD L D F A S + P+ +RG TV
Sbjct: 250 SSDSLILTSQD--------FKIAKSVVGPSINRGITV 278
Score = 41 (19.5 bits), Expect = 3.7e-33, Sum P(2) = 3.7e-33
Identities = 37/150 (24%), Positives = 62/150 (41%)
Query: 623 DSVTVEKYHFIEAMSTITPAAHRGATVHSRPLSLVVAPCLQRHLQKAMNYISDIFPPLGM 682
DS+ + F A S + P+ +RG TV ++ L + L+K + + P+
Sbjct: 252 DSLILTSQDFKIAKSVVGPSINRGITVEIPKVTWDDVGGL-KDLKKKLQQAVEW--PIKH 308
Query: 683 SSELTKLCMLSHGSAIPLVYRPRLLLCGSEGTGVDHLGPAILHELEKFPVHSLGLPALLS 742
S+ K+ G + P+ R +LL G G L A + + SL L S
Sbjct: 309 SAAFVKM-----GIS-PM--RG-ILLHGPPGCSKTTLAKAAANAAQA-SFFSLSCAELFS 358
Query: 743 DPSAKTPEEALVHIFGEARRTTPSILYIPQ 772
+ E L + F AR +PSI++ +
Sbjct: 359 MYVGEG-EALLRNTFQRARLASPSIIFFDE 387
>UNIPROTKB|F6UUI0 [details] [associations]
symbol:SPATA5L1 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GeneTree:ENSGT00700000104502 GO:GO:0017111 OMA:TWEQIGG
Ensembl:ENSCAFT00000021792 EMBL:AAEX03016099 Uniprot:F6UUI0
Length = 789
Score = 404 (147.3 bits), Expect = 8.8e-35, Sum P(2) = 8.8e-35
Identities = 104/269 (38%), Positives = 146/269 (54%)
Query: 381 IGGLSEYIDALKEMVFFPLLYPDFFASYHITPPRGVLLCGPPGTGKTLIARALACAASKA 440
+GGLSE D+L+E++ PL YP A+ + PRGVLL GPPG GKT + RA+A A
Sbjct: 236 LGGLSEAADSLRELLRLPLRYPRTLAALGLAVPRGVLLAGPPGVGKTQLVRAVAREAGAE 295
Query: 441 GQKVSFYMRKGADVLSKWVGEAERQLKLLFEEAQR---NQPSIIFFDEIDGLAPVRSSKQ 497
VS +GA GE E ++ +F A+ P+++F DE+D L P R
Sbjct: 296 LLAVSAPALQGARP-----GETEENVRRVFGRARELASRGPTLLFLDEVDALCPRRGGAH 350
Query: 498 EQIHNSIVSTLLALMDGLDSRGQVVLIGATNRVDAIDGALRRPGRFDREFNFPLPGCEAR 557
+ V+ +L L+DG+ VV++ +TNR DA+D ALRRPGRFDRE P + R
Sbjct: 351 RAPESRAVAQVLTLLDGIRGDRDVVVVASTNRPDALDPALRRPGRFDREVVIGTPTLKQR 410
Query: 558 AEILDIHTRKWKQPPSRELK-SELAASCVGYCGADLKALCTEAAIRAFREKYPQVYTSDD 616
IL + T K P S ++ S LA VGY GADL ALC EAA+ A +++ +
Sbjct: 411 KAILQVITSK--MPISSQVDLSLLAEMTVGYVGADLTALCREAALHAL------LHSEKN 462
Query: 617 KFLIDVDSVTVEKYHFIEAMSTITPAAHR 645
K D+ +++ F EA I P++ R
Sbjct: 463 K-----DNPAIDETDFFEAFKKIQPSSFR 486
Score = 377 (137.8 bits), Expect = 2.7e-31, P = 2.7e-31
Identities = 100/288 (34%), Positives = 153/288 (53%)
Query: 376 VSFDDIGGLSEYIDALKEMVFFPLLYPDFFASYHITPPRGVLLCGPPGTGKTLIARALAC 435
V ++ IGGL + LK+ + +PL +P F +T P+GVLL GPPG KT + RALA
Sbjct: 497 VDWEQIGGLEDVKLKLKQSIEWPLKFPREFVRMGLTQPKGVLLYGPPGCAKTTLVRALAT 556
Query: 436 AASKAGQKVSFYMRKGADVLSKWVGEAERQLKLLFEEAQRNQPSIIFFDEIDGLAPVRS- 494
+ SF GAD+ S +VG++E+ L +F +A+ N P+I+F DEID + RS
Sbjct: 557 SCH-----CSFVSVSGADLFSPFVGDSEKVLSQVFRQARANTPAIVFLDEIDSILGSRSI 611
Query: 495 SKQE-QIHNSIVSTLLALMDGL-----DSRGQ--------------VVLIGATNRVDAID 534
SK E + ++S LL +DG+ + RG V+++ ATNR D +D
Sbjct: 612 SKTECNVQERVLSVLLNELDGVGLKTTERRGSKSDQQEFQEVFNRNVMIVAATNRPDVLD 671
Query: 535 GALRRPGRFDREFNFPLPGCEARAEILDIHTRKWKQPPSRELKSELAASCVGYCGADLKA 594
AL RPGR D+ P P + R IL + T+ P L++ A +C + GADL
Sbjct: 672 DALLRPGRLDKIIYIPPPDEKGRLSILKVCTKNMPMGPDVSLENIAAETCF-FSGADLGN 730
Query: 595 LCTEAAIRAFREKYPQVYTSDDKFLIDVDSVTVEKYHFIEAMSTITPA 642
LC EAA+ A +E +++ TV++ HF++++ T+ P+
Sbjct: 731 LCKEAALLALQEN-------------GLEATTVKQEHFLKSLKTVKPS 765
Score = 53 (23.7 bits), Expect = 8.8e-35, Sum P(2) = 8.8e-35
Identities = 10/34 (29%), Positives = 19/34 (55%)
Query: 741 LSDPSAKTPEEALVHIFGEARRTTPSILYIPQFN 774
L P E+ L +F +AR TP+I+++ + +
Sbjct: 570 LFSPFVGDSEKVLSQVFRQARANTPAIVFLDEID 603
>UNIPROTKB|F8W938 [details] [associations]
symbol:NVL "Nuclear valosin-containing protein-like"
species:9606 "Homo sapiens" [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005730 "nucleolus"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0016235
"aggresome" evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005737 GO:GO:0005730 GO:GO:0016235
GO:GO:0017111 EMBL:AC092809 HGNC:HGNC:8070 ChiTaRS:NVL
IPI:IPI01012615 ProteinModelPortal:F8W938 SMR:F8W938
Ensembl:ENST00000361463 ArrayExpress:F8W938 Bgee:F8W938
Uniprot:F8W938
Length = 589
Score = 388 (141.6 bits), Expect = 9.9e-35, Sum P(2) = 9.9e-35
Identities = 94/232 (40%), Positives = 135/232 (58%)
Query: 375 SVSFDDIGGLSEYIDALKEMVFFPLLYPDFFASYHITPPRGVLLCGPPGTGKTLIARALA 434
+V F+D+GG + + +M+ + +P+ + + PPRGVLL GPPG GKTL+A A+A
Sbjct: 155 NVKFEDVGGNDMTLKEVCKMLIH-MRHPEVYHHLGVVPPRGVLLHGPPGCGKTLLAHAIA 213
Query: 435 CAASKAGQKVSFYMRKGADVLSKWVGEAERQLKLLFEEAQRNQPSIIFFDEIDGLAPVRS 494
KV+ +++S GE+E++L+ LFE+A N P IIF DEID + P R
Sbjct: 214 GELDLPILKVA-----APEIVSGVSGESEQKLRELFEQAVSNAPCIIFIDEIDAITPKRE 268
Query: 495 SKQEQIHNSIVSTLLALMDGLDS---RGQVVLIGATNRVDAIDGALRRPGRFDREFNFPL 551
+ + IV+ LL MD L++ +V++IGATNR D++D ALRR GRFDRE +
Sbjct: 269 VASKDMERRIVAQLLTCMDDLNNVAATARVLVIGATNRPDSLDPALRRAGRFDREICLGI 328
Query: 552 PGCEARAEILDIHTRKWKQPPSRELKSELAASCVGYCGADLKALCTEAAIRA 603
P +R IL RK + P + + LA G+ GADL ALC EAA+ A
Sbjct: 329 PDEASRERILQTLCRKLRLPQAFDF-CHLAHLTPGFVGADLMALCREAAMCA 379
Score = 242 (90.2 bits), Expect = 7.5e-17, P = 7.5e-17
Identities = 49/123 (39%), Positives = 81/123 (65%)
Query: 375 SVSFDDIGGLSEYIDALKEMVFFPLLYPDFFASYHITPPRGVLLCGPPGTGKTLIARALA 434
+V++ DIG L + + L + P+ PD F + + P GVLL GPPG GKTL+A+A+A
Sbjct: 471 NVTWADIGALEDIREELTMAILAPVRNPDQFKALGLVTPAGVLLAGPPGCGKTLLAKAVA 530
Query: 435 CAASKAGQKVSFYMRKGADVLSKWVGEAERQLKLLFEEAQRNQPSIIFFDEIDGLAPVRS 494
+++G ++F KG ++L+ +VGE+ER ++ +F+ A+ + P +IFFDE+D L P RS
Sbjct: 531 ---NESG--LNFISVKGPELLNMYVGESERAVRQVFQRAKNSAPCVIFFDEVDALCPRRS 585
Query: 495 SKQ 497
++
Sbjct: 586 DRE 588
Score = 58 (25.5 bits), Expect = 9.9e-35, Sum P(2) = 9.9e-35
Identities = 35/151 (23%), Positives = 63/151 (41%)
Query: 622 VDSVTVEKYHFIEAMSTITPAAHRGATVHSRPLSLVVAPCLQRHLQKAMNYISDIFPPLG 681
+ + +E FI A+S++ P+A R V P + + + DI L
Sbjct: 440 MQGLCIELNDFIVALSSVQPSAKREG--------FVTVPNVT---WADIGALEDIREELT 488
Query: 682 MSSELTKLCMLSHGSAIPLVYRPRLLLCGSEGTGVDHLGPAILHELEKFPVHSLGLPALL 741
M+ L + A+ LV +LL G G G L A+ +E + G P LL
Sbjct: 489 MAI-LAPVRNPDQFKALGLVTPAGVLLAGPPGCGKTLLAKAVANESGLNFISVKG-PELL 546
Query: 742 SDPSAKTPEEALVHIFGEARRTTPSILYIPQ 772
+ ++ E A+ +F A+ + P +++ +
Sbjct: 547 NMYVGES-ERAVRQVFQRAKNSAPCVIFFDE 576
>TAIR|locus:2154568 [details] [associations]
symbol:ftsh9 "FTSH protease 9" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0004222 "metalloendopeptidase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0006508 "proteolysis"
evidence=IEA] [GO:0008237 "metallopeptidase activity" evidence=ISS]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0009507
"chloroplast" evidence=ISM;IDA] [GO:0016020 "membrane"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0004176
"ATP-dependent peptidase activity" evidence=ISS] [GO:0009941
"chloroplast envelope" evidence=IDA] [GO:0010304 "PSII associated
light-harvesting complex II catabolic process" evidence=RCA]
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005936 InterPro:IPR011546
Pfam:PF00004 Pfam:PF01434 Pfam:PF06480 PROSITE:PS00674
SMART:SM00382 GO:GO:0016021 GO:GO:0005524 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0046872 GO:GO:0008270 GO:GO:0006508
GO:GO:0009941 GO:GO:0004222 GO:GO:0030163 eggNOG:COG0465
TIGRFAMs:TIGR01241 HSSP:Q9WZ49 GO:GO:0009535 EMBL:AB016885
GO:GO:0004176 HOGENOM:HOG000217276 KO:K03798
ProtClustDB:CLSN2689036 EMBL:AY059856 IPI:IPI00541670
RefSeq:NP_568892.1 UniGene:At.7754 ProteinModelPortal:Q9FIM2
SMR:Q9FIM2 STRING:Q9FIM2 MEROPS:M41.A03 PaxDb:Q9FIM2 PRIDE:Q9FIM2
EnsemblPlants:AT5G58870.1 GeneID:836004 KEGG:ath:AT5G58870
GeneFarm:2516 TAIR:At5g58870 InParanoid:Q9FIM2 OMA:SSKRGEN
PhylomeDB:Q9FIM2 Genevestigator:Q9FIM2 Uniprot:Q9FIM2
Length = 806
Score = 399 (145.5 bits), Expect = 1.1e-34, Sum P(2) = 1.1e-34
Identities = 102/284 (35%), Positives = 148/284 (52%)
Query: 351 TSGIQTAGPSSKGGADIQPLQVDESVSFDDIGGLSEYIDALKEMVFFPLLYPDFFASYHI 410
T ++T GG + E+++F D+ G+ E + L+E+V F L PD +
Sbjct: 303 TGQLRTRKSGGPGGGKVSG--DGETITFADVAGVDEAKEELEEIVEF-LKNPDRYVRLGA 359
Query: 411 TPPRGVLLCGPPGTGKTLIARALACAASKAGQKVSFYMRKGADVLSKWVGEAERQLKLLF 470
PPRGVLL G PGTGKTL+A+A+A + V F ++ + +VG +++ LF
Sbjct: 360 RPPRGVLLVGLPGTGKTLLAKAVAGESD-----VPFISCSASEFVELYVGMGASRVRDLF 414
Query: 471 EEAQRNQPSIIFFDEIDGLAPVRSSKQEQIHNS----IVSTLLALMDGLDSRGQVVLIGA 526
A++ PSIIF DEID +A R K + N ++ LL MDG DS V+++GA
Sbjct: 415 ARAKKEAPSIIFIDEIDAVAKSRDGKFRMVSNDEREQTLNQLLTEMDGFDSSSAVIVLGA 474
Query: 527 TNRVDAIDGALRRPGRFDREFNFPLPGCEARAEILDIHTRKWKQPPSRELK-SELAASCV 585
TNR D +D ALRRPGRFDR P R IL +H K + P ++ + +A+
Sbjct: 475 TNRADVLDPALRRPGRFDRVVTVESPDKVGRESILKVHVSKKELPLGDDVNLASIASMTT 534
Query: 586 GYCGADLKALCTEAAIRAFREKYPQVYTSDDKFLIDVDSVTVEK 629
G+ GADL L EAA+ A R+ V D ++ +EK
Sbjct: 535 GFTGADLANLVNEAALLAGRKSKMTVDKIDFIHAVERSIAGIEK 578
Score = 58 (25.5 bits), Expect = 1.1e-34, Sum P(2) = 1.1e-34
Identities = 14/53 (26%), Positives = 27/53 (50%)
Query: 145 EGLRPRRSMVATRKQLNLDSGDEQGSSEEKVGQDETENGNESDNDADDGQNEI 197
+G ++S ++R +N GD++ SS E G+ + G + G+NE+
Sbjct: 74 QGFSRKKSTSSSRTIVNCQEGDQKASSSEGEGKTNKDKGRKQ------GKNEL 120
Score = 37 (18.1 bits), Expect = 1.8e-32, Sum P(2) = 1.8e-32
Identities = 16/56 (28%), Positives = 25/56 (44%)
Query: 123 SQDELSPSKRKKVVEAKPTPR--REGLRPRRSMVATRKQLNLDSGDEQGSSEEKVG 176
S +LS S + PT R RPR + T + L++ E GS +++ G
Sbjct: 218 SSIKLSESSETMLRSVAPTKRVVYSTTRPRD--IKTPYEKMLENNVEFGSPDKRSG 271
>UNIPROTKB|O42587 [details] [associations]
symbol:psmc3-a "26S protease regulatory subunit 6A-A"
species:8355 "Xenopus laevis" [GO:0022624 "proteasome accessory
complex" evidence=ISS] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0030163 GO:GO:0017111 CTD:4913 TIGRFAMs:TIGR01242 EMBL:Y10461
RefSeq:NP_001080249.1 UniGene:Xl.12803 ProteinModelPortal:O42587
PRIDE:O42587 GeneID:379941 KEGG:xla:379941 Xenbase:XB-GENE-962533
HOVERGEN:HBG000109 KO:K03065 GO:GO:0022624 Uniprot:O42587
Length = 405
Score = 385 (140.6 bits), Expect = 1.3e-34, P = 1.3e-34
Identities = 93/245 (37%), Positives = 134/245 (54%)
Query: 367 IQPLQVDE--SVSFDDIGGLSEYIDALKEMVFFPLLYPDFFASYHITPPRGVLLCGPPGT 424
++ ++VDE + + DIGGL + I L E + P+ + + F + I PP+GVL+ GPPGT
Sbjct: 156 VKAMEVDERPTEQYSDIGGLDKQIQELVEAIVLPMNHKEKFENLGIQPPKGVLMYGPPGT 215
Query: 425 GKTLIARALACAASKAGQKVSFYMRKGADVLSKWVGEAERQLKLLFEEAQRNQPSIIFFD 484
GKTL+ARA CAA K +F G ++ ++G+ + ++ F A+ PSIIF D
Sbjct: 216 GKTLLARA--CAAQT---KATFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPSIIFID 270
Query: 485 EIDGLAPVRSSKQEQIHNSIVSTLLALM---DGLDSRGQVVLIGATNRVDAIDGALRRPG 541
E+D + R ++ + T+L L+ DG QV +I ATNRVD +D AL R G
Sbjct: 271 ELDAIGTKRFDSEKAGDREVQRTMLELLNQLDGFQPNMQVKVIAATNRVDILDPALLRSG 330
Query: 542 RFDREFNFPLPGCEARAEILDIHTRKWKQPPSRELKSELAASCVGYCGA-DLKALCTEAA 600
R DR+ FP+P EARA I+ IH+RK P ++ E A C A K EA
Sbjct: 331 RLDRKIEFPMPNEEARARIMQIHSRKMNVSP--DVNYEELARCPTISMALSAKQFGVEAG 388
Query: 601 IRAFR 605
+ A R
Sbjct: 389 MIALR 393
WARNING: HSPs involving 460 database sequences were not reported due to the
limiting value of parameter B = 250.
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.317 0.134 0.392 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 976 904 0.00088 122 3 11 22 0.41 34
37 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 710
No. of states in DFA: 622 (66 KB)
Total size of DFA: 402 KB (2196 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 85.26u 0.08s 85.34t Elapsed: 00:00:04
Total cpu time: 85.33u 0.08s 85.41t Elapsed: 00:00:04
Start: Fri May 10 07:17:09 2013 End: Fri May 10 07:17:13 2013
WARNINGS ISSUED: 2