Query 002047
Match_columns 975
No_of_seqs 712 out of 4766
Neff 7.6
Searched_HMMs 29240
Date Mon Mar 25 10:07:32 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/002047.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/002047hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3e7a_A PP-1A, serine/threonine 100.0 2.5E-70 8.5E-75 596.1 29.7 291 648-954 8-298 (299)
2 3h63_A Serine/threonine-protei 100.0 2.2E-66 7.4E-71 569.1 29.5 291 646-960 14-310 (315)
3 3icf_A PPT, serine/threonine-p 100.0 1.5E-66 5E-71 574.3 27.5 294 644-961 13-325 (335)
4 3ll8_A Serine/threonine-protei 100.0 3.5E-66 1.2E-70 572.4 29.7 289 648-959 30-329 (357)
5 1fjm_A Protein serine/threonin 100.0 2.2E-64 7.6E-69 558.7 29.5 294 648-957 9-302 (330)
6 2ie4_C PP2A-alpha;, serine/thr 100.0 1.7E-63 5.7E-68 548.8 29.5 287 647-957 9-295 (309)
7 1aui_A Calcineurin, serine/thr 100.0 3.2E-63 1.1E-67 567.3 30.2 290 648-960 43-343 (521)
8 1wao_1 Serine/threonine protei 100.0 9.6E-57 3.3E-61 530.8 30.7 289 646-958 167-461 (477)
9 1zgk_A Kelch-like ECH-associat 100.0 1.1E-38 3.8E-43 354.3 32.2 280 83-441 6-288 (308)
10 2uvk_A YJHT; unknown function, 100.0 1.9E-37 6.7E-42 351.0 28.7 281 85-440 3-342 (357)
11 2xn4_A Kelch-like protein 2; s 100.0 1.4E-36 4.6E-41 335.9 33.7 262 113-441 15-277 (302)
12 3ii7_A Kelch-like protein 7; p 100.0 2.2E-36 7.5E-41 334.9 34.9 259 113-441 11-273 (306)
13 2vpj_A Kelch-like protein 12; 100.0 4.4E-36 1.5E-40 331.4 35.3 264 113-440 14-278 (301)
14 2xn4_A Kelch-like protein 2; s 100.0 1.4E-35 4.9E-40 327.7 33.9 260 80-418 40-302 (302)
15 3ii7_A Kelch-like protein 7; p 100.0 1.7E-35 5.7E-40 327.8 31.4 260 78-416 32-295 (306)
16 1zgk_A Kelch-like ECH-associat 100.0 3.8E-35 1.3E-39 325.8 32.0 260 80-414 49-308 (308)
17 2vpj_A Kelch-like protein 12; 100.0 1.3E-34 4.4E-39 319.7 32.6 257 80-415 41-300 (301)
18 4asc_A Kelch repeat and BTB do 100.0 1.5E-35 5.2E-40 329.9 23.8 267 87-423 31-305 (315)
19 4asc_A Kelch repeat and BTB do 100.0 1.1E-34 3.6E-39 323.1 28.4 248 151-441 14-278 (315)
20 2woz_A Kelch repeat and BTB do 100.0 2.4E-34 8.1E-39 320.7 29.9 248 151-441 25-288 (318)
21 2woz_A Kelch repeat and BTB do 100.0 9.1E-35 3.1E-39 324.1 25.9 267 87-423 42-315 (318)
22 2zwa_A Leucine carboxyl methyl 100.0 2.7E-34 9.4E-39 353.7 29.5 295 85-440 382-694 (695)
23 2z72_A Protein-tyrosine-phosph 100.0 7.7E-36 2.6E-40 335.9 14.0 243 687-944 60-322 (342)
24 2uvk_A YJHT; unknown function, 100.0 3.5E-30 1.2E-34 291.4 23.9 253 81-381 44-351 (357)
25 2dfj_A Diadenosinetetraphospha 100.0 1.3E-30 4.5E-35 284.7 -1.0 202 698-914 1-211 (280)
26 1k3i_A Galactose oxidase precu 100.0 1.5E-27 5.1E-32 292.5 25.4 274 89-425 183-531 (656)
27 2zwa_A Leucine carboxyl methyl 100.0 3E-27 1E-31 291.0 27.6 232 171-442 385-637 (695)
28 1k3i_A Galactose oxidase precu 99.9 1.9E-22 6.7E-27 247.1 22.2 248 151-440 167-497 (656)
29 2qjc_A Diadenosine tetraphosph 99.9 4.9E-23 1.7E-27 223.2 10.4 186 685-886 6-206 (262)
30 1g5b_A Serine/threonine protei 99.8 7E-20 2.4E-24 193.5 1.3 122 698-830 13-145 (221)
31 3rqz_A Metallophosphoesterase; 99.4 2.4E-13 8.3E-18 145.7 12.2 188 697-949 3-216 (246)
32 1nnw_A Hypothetical protein; s 99.4 3E-12 1E-16 137.3 16.0 199 698-951 2-222 (252)
33 3qfm_A SAPH, putative uncharac 99.4 1.9E-12 6.6E-17 140.6 12.4 118 699-827 13-139 (270)
34 1su1_A Hypothetical protein YF 98.7 2.6E-08 9E-13 103.6 8.8 69 698-776 26-102 (208)
35 1s3l_A Hypothetical protein MJ 98.7 2.4E-07 8.2E-12 94.9 14.8 65 698-777 26-90 (190)
36 1uf3_A Hypothetical protein TT 98.6 4.2E-07 1.4E-11 94.9 15.4 74 697-777 5-78 (228)
37 3ck2_A Conserved uncharacteriz 98.4 1.4E-06 5E-11 87.8 12.4 58 698-775 7-64 (176)
38 2a22_A Vacuolar protein sortin 98.4 5.7E-06 2E-10 86.3 16.7 120 697-907 25-153 (215)
39 2kkn_A Uncharacterized protein 98.4 1.8E-07 6.2E-12 94.8 4.5 62 698-775 23-86 (178)
40 1z2w_A Vacuolar protein sortin 98.2 1.1E-05 3.8E-10 82.4 14.1 64 698-776 11-77 (192)
41 1xm7_A Hypothetical protein AQ 98.2 3.4E-06 1.2E-10 86.5 10.0 69 698-776 2-85 (195)
42 3ib7_A ICC protein; metallopho 97.9 0.0001 3.5E-09 81.3 15.8 72 697-774 25-112 (330)
43 2yvt_A Hypothetical protein AQ 97.9 4.6E-06 1.6E-10 89.0 4.5 74 697-777 5-104 (260)
44 3rl5_A Metallophosphoesterase 97.4 0.0029 1E-07 68.7 16.2 63 698-776 60-124 (296)
45 3d03_A Phosphohydrolase; glyce 97.3 0.00036 1.2E-08 74.6 8.0 68 698-775 1-84 (274)
46 3mbr_X Glutamine cyclotransfer 97.2 0.043 1.5E-06 57.7 23.0 185 113-352 30-224 (243)
47 2q8u_A Exonuclease, putative; 97.1 0.0004 1.4E-08 77.3 5.6 77 692-776 12-110 (336)
48 2nxf_A Putative dimetal phosph 97.0 0.00037 1.3E-08 76.1 4.2 72 698-775 6-100 (322)
49 3av0_A DNA double-strand break 97.0 0.00079 2.7E-08 76.4 7.1 73 697-776 20-109 (386)
50 1ii7_A MRE11 nuclease; RAD50, 97.0 0.0008 2.7E-08 74.7 6.6 71 698-775 1-88 (333)
51 3dsm_A Uncharacterized protein 96.9 0.16 5.4E-06 55.6 25.2 182 150-375 64-256 (328)
52 3dsm_A Uncharacterized protein 96.9 0.25 8.5E-06 53.9 26.5 231 149-440 16-253 (328)
53 3q7m_A Lipoprotein YFGL, BAMB; 96.7 0.96 3.3E-05 49.8 32.7 187 151-377 64-265 (376)
54 3q7m_A Lipoprotein YFGL, BAMB; 96.7 0.58 2E-05 51.6 27.6 177 150-374 153-339 (376)
55 3mbr_X Glutamine cyclotransfer 96.5 0.98 3.4E-05 47.3 26.1 207 177-440 23-235 (243)
56 3nol_A Glutamine cyclotransfer 96.5 0.11 3.7E-06 55.2 18.6 184 113-352 52-245 (262)
57 2xmo_A LMO2642 protein; phosph 96.4 0.0028 9.6E-08 73.1 6.0 72 698-776 40-139 (443)
58 3nok_A Glutaminyl cyclase; bet 96.3 0.13 4.5E-06 54.6 17.9 181 113-351 64-254 (268)
59 2iwa_A Glutamine cyclotransfer 96.3 1.3 4.3E-05 47.2 25.5 185 150-373 44-238 (266)
60 1kb0_A Quinohemoprotein alcoho 96.2 0.27 9.4E-06 59.7 22.6 115 150-272 87-208 (677)
61 3tho_B Exonuclease, putative; 96.1 0.0028 9.6E-08 71.7 4.0 70 698-775 1-91 (379)
62 3bws_A Protein LP49; two-domai 96.0 0.9 3.1E-05 50.7 24.1 188 151-377 145-339 (433)
63 4fbk_A DNA repair and telomere 95.9 0.0062 2.1E-07 70.0 5.4 53 698-756 77-141 (472)
64 3t1i_A Double-strand break rep 95.8 0.0071 2.4E-07 69.1 5.5 54 698-757 33-98 (431)
65 3nol_A Glutamine cyclotransfer 95.8 2.2 7.6E-05 45.1 24.4 206 178-440 46-256 (262)
66 4fbw_A DNA repair protein RAD3 95.7 0.0094 3.2E-07 67.8 6.1 53 698-756 14-78 (417)
67 2iwa_A Glutamine cyclotransfer 95.7 2.4 8.1E-05 45.0 24.4 209 178-442 24-239 (266)
68 2ad6_A Methanol dehydrogenase 95.6 0.76 2.6E-05 54.5 22.4 114 150-272 73-194 (571)
69 2hqs_A Protein TOLB; TOLB, PAL 95.2 1.6 5.4E-05 49.2 22.4 190 150-379 159-351 (415)
70 1l0q_A Surface layer protein; 95.0 2 6.7E-05 47.1 21.9 178 150-378 12-195 (391)
71 1l0q_A Surface layer protein; 94.8 1.9 6.6E-05 47.1 21.2 178 150-376 54-237 (391)
72 1w6s_A Methanol dehydrogenase 94.7 1.8 6.1E-05 51.7 21.7 114 150-272 73-200 (599)
73 1yiq_A Quinohemoprotein alcoho 94.6 4.7 0.00016 48.8 25.9 114 150-271 80-200 (689)
74 3no2_A Uncharacterized protein 94.6 5.2 0.00018 42.3 23.3 182 150-378 15-203 (276)
75 3u4y_A Uncharacterized protein 94.5 4.8 0.00016 42.7 23.0 186 149-375 19-210 (331)
76 1gxr_A ESG1, transducin-like e 94.5 2.9 9.9E-05 44.1 21.2 180 150-376 119-300 (337)
77 1ute_A Protein (II purple acid 94.4 0.018 6.1E-07 62.3 3.3 22 885-906 203-224 (313)
78 1kv9_A Type II quinohemoprotei 94.4 5.7 0.0002 47.9 25.8 114 150-272 76-196 (668)
79 2qfp_A Purple acid phosphatase 94.2 0.053 1.8E-06 62.0 6.8 72 698-776 120-198 (424)
80 3vgz_A Uncharacterized protein 93.9 7.8 0.00027 41.2 30.1 188 150-378 111-309 (353)
81 2ojh_A Uncharacterized protein 93.8 1.9 6.4E-05 44.4 17.5 189 148-379 20-213 (297)
82 4ery_A WD repeat-containing pr 93.7 8 0.00028 40.7 23.4 180 151-376 46-227 (312)
83 1p22_A F-BOX/WD-repeat protein 93.5 6.7 0.00023 43.8 22.8 175 150-375 153-328 (435)
84 4aez_A CDC20, WD repeat-contai 93.4 9.2 0.00031 42.1 23.5 188 150-381 156-345 (401)
85 3jrp_A Fusion protein of prote 93.4 6.8 0.00023 42.0 21.9 96 151-264 34-135 (379)
86 3no2_A Uncharacterized protein 93.4 3.2 0.00011 44.0 18.7 154 185-376 5-160 (276)
87 1xzw_A Purple acid phosphatase 93.4 0.079 2.7E-06 60.6 6.3 70 698-776 127-205 (426)
88 2ovr_B FBW7, F-BOX/WD repeat p 93.2 11 0.00037 42.1 24.0 178 150-377 219-396 (445)
89 3nok_A Glutaminyl cyclase; bet 93.1 3.4 0.00012 43.8 17.8 200 178-439 58-265 (268)
90 3bws_A Protein LP49; two-domai 93.0 3.7 0.00013 45.5 19.5 193 151-378 102-298 (433)
91 3vl1_A 26S proteasome regulato 93.0 12 0.0004 41.1 23.5 93 151-264 120-213 (420)
92 2hqs_A Protein TOLB; TOLB, PAL 92.8 3.5 0.00012 46.3 18.9 189 150-380 203-395 (415)
93 4aez_A CDC20, WD repeat-contai 92.7 3.9 0.00013 45.2 19.0 183 150-377 113-298 (401)
94 1flg_A Protein (quinoprotein e 92.6 4.5 0.00015 48.0 20.3 111 151-271 79-201 (582)
95 3vgz_A Uncharacterized protein 92.5 12 0.00042 39.6 28.3 192 149-379 68-269 (353)
96 3jrp_A Fusion protein of prote 92.0 4.2 0.00014 43.6 17.8 197 151-381 80-297 (379)
97 1k8k_C P40, ARP2/3 complex 41 91.6 10 0.00035 40.6 20.2 134 150-302 30-164 (372)
98 3hfq_A Uncharacterized protein 91.5 12 0.00041 40.0 20.6 201 151-381 19-229 (347)
99 1jmx_B Amine dehydrogenase; ox 91.4 6.5 0.00022 41.7 18.2 104 150-264 21-135 (349)
100 2ovr_B FBW7, F-BOX/WD repeat p 91.3 14 0.00047 41.2 21.7 172 151-375 140-311 (445)
101 1got_B GT-beta; complex (GTP-b 91.1 13 0.00044 39.9 20.4 180 151-375 78-260 (340)
102 1pjx_A Dfpase, DIISOPROPYLFLUO 91.0 16 0.00056 38.0 20.7 103 150-262 46-161 (314)
103 4ery_A WD repeat-containing pr 90.9 17 0.00059 38.0 23.4 180 150-374 87-270 (312)
104 3ow8_A WD repeat-containing pr 90.5 20 0.0007 38.1 21.7 180 150-376 102-283 (321)
105 1gxr_A ESG1, transducin-like e 90.2 18 0.00063 37.7 20.3 150 184-376 108-259 (337)
106 3jro_A Fusion protein of prote 89.9 5.1 0.00018 48.9 17.4 96 151-264 32-133 (753)
107 3c5m_A Oligogalacturonate lyas 89.5 18 0.00061 39.0 20.0 52 150-212 60-113 (396)
108 4gqb_B Methylosome protein 50; 89.2 5.3 0.00018 43.6 15.3 151 184-377 138-294 (344)
109 3g4e_A Regucalcin; six bladed 88.7 26 0.00088 36.8 22.4 189 150-381 35-238 (297)
110 4d9s_A UVB-resistance protein 88.6 23 0.00077 39.6 20.4 63 229-300 182-252 (406)
111 2z3z_A Dipeptidyl aminopeptida 88.5 29 0.00098 41.3 22.5 114 253-379 234-351 (706)
112 1p22_A F-BOX/WD-repeat protein 88.5 11 0.00037 42.1 17.7 63 183-264 141-203 (435)
113 3zwl_B Eukaryotic translation 88.5 24 0.00081 37.3 19.8 192 151-378 55-255 (369)
114 2ecf_A Dipeptidyl peptidase IV 88.4 5.3 0.00018 48.1 16.0 104 149-274 63-190 (741)
115 3mkq_A Coatomer beta'-subunit; 88.0 31 0.001 41.6 22.6 180 151-375 36-220 (814)
116 1ri6_A Putative isomerase YBHE 88.0 28 0.00096 36.4 21.5 96 151-264 61-162 (343)
117 1sq9_A Antiviral protein SKI8; 88.0 32 0.0011 37.0 21.2 101 151-264 92-217 (397)
118 3hfq_A Uncharacterized protein 87.8 19 0.00065 38.3 18.5 101 150-264 63-173 (347)
119 2ojh_A Uncharacterized protein 87.8 11 0.00036 38.5 15.9 198 151-380 63-266 (297)
120 4gga_A P55CDC, cell division c 87.7 21 0.0007 39.6 19.3 93 150-264 125-219 (420)
121 2ad6_A Methanol dehydrogenase 87.7 49 0.0017 38.8 27.0 82 185-271 247-343 (571)
122 3tgh_A Glideosome-associated p 87.6 0.22 7.6E-06 55.1 2.6 26 884-909 214-239 (342)
123 3ow8_A WD repeat-containing pr 87.2 33 0.0011 36.4 21.0 149 185-376 92-241 (321)
124 3qfk_A Uncharacterized protein 87.1 0.34 1.2E-05 57.0 3.9 68 697-774 19-112 (527)
125 1r5m_A SIR4-interacting protei 86.9 20 0.00069 38.8 18.4 99 149-264 170-279 (425)
126 1hp1_A 5'-nucleotidase; metall 86.7 0.29 9.9E-06 57.4 3.1 72 697-774 8-94 (516)
127 2ynn_A Coatomer subunit beta'; 86.4 24 0.00084 37.0 18.1 93 151-264 36-129 (304)
128 1r5m_A SIR4-interacting protei 86.2 40 0.0014 36.3 20.8 180 151-376 131-323 (425)
129 3scy_A Hypothetical bacterial 85.9 37 0.0013 36.3 19.6 99 151-264 30-130 (361)
130 3v7d_B Cell division control p 85.9 30 0.001 38.5 19.4 173 150-370 290-463 (464)
131 2dg1_A DRP35, lactonase; beta 85.5 39 0.0013 35.5 21.6 110 150-271 66-177 (333)
132 1w6s_A Methanol dehydrogenase 85.5 65 0.0022 38.0 25.7 83 184-271 252-350 (599)
133 3zwl_B Eukaryotic translation 85.2 40 0.0014 35.4 20.8 136 150-301 96-239 (369)
134 3mkq_A Coatomer beta'-subunit; 85.1 19 0.00064 43.5 18.5 182 150-376 77-263 (814)
135 1kb0_A Quinohemoprotein alcoho 85.1 20 0.00069 43.1 18.4 130 180-325 73-208 (677)
136 4gga_A P55CDC, cell division c 85.1 49 0.0017 36.4 20.6 94 150-264 169-262 (420)
137 3v9f_A Two-component system se 85.0 49 0.0017 40.2 22.1 188 150-380 427-619 (781)
138 2z3z_A Dipeptidyl aminopeptida 84.9 30 0.001 41.2 19.8 160 200-379 234-398 (706)
139 3pe7_A Oligogalacturonate lyas 84.9 16 0.00056 39.4 16.2 201 150-381 60-282 (388)
140 3odt_A Protein DOA1; ubiquitin 84.1 31 0.0011 35.4 17.4 176 151-375 40-217 (313)
141 3vl1_A 26S proteasome regulato 83.6 26 0.00089 38.2 17.3 96 184-302 108-203 (420)
142 1ri6_A Putative isomerase YBHE 83.3 42 0.0014 35.0 18.3 18 364-381 302-319 (343)
143 3fm0_A Protein CIAO1; WDR39,SG 83.3 17 0.00057 39.1 15.3 163 184-381 27-190 (345)
144 2vdu_B TRNA (guanine-N(7)-)-me 83.0 45 0.0015 37.1 19.2 154 186-377 116-276 (450)
145 1vyh_C Platelet-activating fac 82.4 51 0.0017 36.3 19.2 123 151-302 131-256 (410)
146 4a2l_A BT_4663, two-component 82.2 51 0.0018 40.0 20.7 189 150-380 427-622 (795)
147 2vdu_B TRNA (guanine-N(7)-)-me 82.2 67 0.0023 35.6 22.2 63 185-264 210-272 (450)
148 4h2g_A 5'-nucleotidase; dimer, 81.9 0.9 3.1E-05 53.6 4.4 68 697-774 25-117 (546)
149 2pm9_A Protein WEB1, protein t 81.8 18 0.00063 39.3 15.1 68 185-264 126-198 (416)
150 1qhu_A Protein (hemopexin); be 81.7 36 0.0012 38.8 17.5 49 151-211 168-216 (460)
151 1erj_A Transcriptional repress 81.0 47 0.0016 36.2 18.1 92 151-264 146-239 (393)
152 2z1a_A 5'-nucleotidase; metal- 80.9 1.2 4.2E-05 52.5 5.1 69 697-775 29-119 (552)
153 3dwl_C Actin-related protein 2 80.8 10 0.00035 40.9 12.4 134 151-302 34-168 (377)
154 1yfq_A Cell cycle arrest prote 80.8 50 0.0017 34.5 17.7 193 151-376 80-286 (342)
155 2ecf_A Dipeptidyl peptidase IV 80.6 36 0.0012 40.7 18.3 110 255-379 264-375 (741)
156 4d9s_A UVB-resistance protein 80.5 76 0.0026 35.2 20.7 63 229-300 130-200 (406)
157 3e5z_A Putative gluconolactona 79.8 60 0.002 33.5 21.4 188 149-379 49-253 (296)
158 3c5m_A Oligogalacturonate lyas 79.7 19 0.00065 38.8 14.1 131 148-299 166-301 (396)
159 4a11_B DNA excision repair pro 79.6 29 0.00098 37.3 15.6 94 150-264 122-219 (408)
160 3fm0_A Protein CIAO1; WDR39,SG 79.6 48 0.0017 35.4 17.3 132 151-302 39-172 (345)
161 2xdw_A Prolyl endopeptidase; a 79.5 75 0.0026 37.9 20.6 199 151-374 152-370 (710)
162 1kv9_A Type II quinohemoprotei 79.3 65 0.0022 38.5 19.8 129 180-325 62-196 (668)
163 4g56_B MGC81050 protein; prote 79.2 7.5 0.00026 42.4 10.6 63 184-264 150-214 (357)
164 1yiq_A Quinohemoprotein alcoho 79.0 86 0.0029 37.6 20.8 131 180-326 66-202 (689)
165 3i2n_A WD repeat-containing pr 78.7 7.3 0.00025 41.4 10.1 96 150-264 44-149 (357)
166 3iz6_a 40S ribosomal protein R 78.6 41 0.0014 36.5 16.5 26 343-377 260-285 (380)
167 4e54_B DNA damage-binding prot 78.3 9.7 0.00033 42.6 11.4 97 151-264 143-241 (435)
168 4gqb_B Methylosome protein 50; 77.8 56 0.0019 35.2 17.1 94 151-264 150-247 (344)
169 2bkl_A Prolyl endopeptidase; m 77.7 37 0.0013 40.6 17.1 243 149-438 93-349 (695)
170 3azo_A Aminopeptidase; POP fam 77.7 58 0.002 38.2 18.6 202 149-380 160-377 (662)
171 1jmx_B Amine dehydrogenase; ox 76.9 75 0.0026 33.1 18.6 102 150-265 65-177 (349)
172 3ztv_A NAD nucleotidase, NADN; 76.8 2 6.7E-05 51.1 5.1 68 697-774 12-105 (579)
173 2hes_X YDR267CP; beta-propelle 76.7 31 0.0011 36.7 14.5 164 184-380 118-288 (330)
174 3ive_A Nucleotidase; structura 76.6 1.3 4.4E-05 51.8 3.4 66 698-774 7-96 (509)
175 1got_B GT-beta; complex (GTP-b 76.2 84 0.0029 33.3 23.7 138 201-374 164-303 (340)
176 2mad_H Methylamine dehydrogena 76.2 95 0.0033 33.9 28.2 103 151-264 48-157 (373)
177 1sq9_A Antiviral protein SKI8; 75.8 51 0.0017 35.4 16.2 63 186-263 82-157 (397)
178 3iuj_A Prolyl endopeptidase; h 75.7 75 0.0026 38.0 19.0 199 150-378 155-365 (693)
179 2ynn_A Coatomer subunit beta'; 75.5 77 0.0026 32.9 17.1 92 151-264 78-173 (304)
180 2aq5_A Coronin-1A; WD40 repeat 75.5 42 0.0014 36.6 15.5 93 186-298 145-238 (402)
181 1t71_A Phosphatase, conserved 74.8 1.7 5.7E-05 46.5 3.4 68 697-775 4-75 (281)
182 2z2n_A Virginiamycin B lyase; 74.5 78 0.0027 32.1 24.4 180 151-378 79-260 (299)
183 2z2n_A Virginiamycin B lyase; 74.3 79 0.0027 32.1 26.9 181 150-378 36-218 (299)
184 2gop_A Trilobed protease; beta 74.2 86 0.0029 32.9 17.3 191 148-379 41-258 (347)
185 3ei3_B DNA damage-binding prot 74.1 97 0.0033 33.1 19.5 128 151-302 97-227 (383)
186 2pm9_A Protein WEB1, protein t 73.4 43 0.0015 36.2 14.9 67 185-264 178-250 (416)
187 1vyh_C Platelet-activating fac 72.6 1.1E+02 0.0038 33.4 18.2 64 184-264 203-266 (410)
188 1qks_A Cytochrome CD1 nitrite 72.4 1.2E+02 0.0039 35.6 19.0 93 149-265 176-277 (567)
189 2pbi_B Guanine nucleotide-bind 72.3 1.1E+02 0.0037 32.8 19.3 179 151-375 87-274 (354)
190 1k8k_C P40, ARP2/3 complex 41 72.0 1E+02 0.0035 32.4 22.2 97 151-262 75-172 (372)
191 1nir_A Nitrite reductase; hemo 72.0 1.3E+02 0.0044 34.8 19.2 194 150-381 200-416 (543)
192 3sfz_A APAF-1, apoptotic pepti 71.9 1.6E+02 0.0054 37.4 21.8 124 151-302 638-765 (1249)
193 1rwi_B Serine/threonine-protei 71.8 86 0.0029 31.4 21.0 177 150-374 46-224 (270)
194 3u4y_A Uncharacterized protein 71.3 1E+02 0.0034 32.0 21.7 185 150-381 62-261 (331)
195 2xdw_A Prolyl endopeptidase; a 71.0 1.7E+02 0.0059 34.6 21.5 211 149-380 97-331 (710)
196 1q7f_A NHL, brain tumor CG1071 70.8 96 0.0033 31.6 30.7 189 150-378 51-244 (286)
197 3mmy_A MRNA export factor; mRN 70.8 1.1E+02 0.0036 32.0 19.1 99 150-273 108-209 (368)
198 3azo_A Aminopeptidase; POP fam 70.3 1.1E+02 0.0037 35.8 18.4 206 150-379 102-332 (662)
199 4g56_B MGC81050 protein; prote 70.1 6.9 0.00024 42.6 7.3 28 184-211 53-80 (357)
200 3f3f_A Nucleoporin SEH1; struc 69.0 80 0.0027 32.5 15.3 66 185-264 23-91 (351)
201 3hxj_A Pyrrolo-quinoline quino 68.2 1.2E+02 0.004 31.5 17.0 169 150-376 117-289 (330)
202 3ott_A Two-component system se 67.7 2E+02 0.007 34.4 20.5 192 149-378 391-592 (758)
203 3gve_A YFKN protein; alpha-bet 67.7 3.2 0.00011 45.7 3.8 68 697-774 11-111 (341)
204 2gop_A Trilobed protease; beta 67.3 1.3E+02 0.0043 31.6 17.6 137 150-314 85-250 (347)
205 2qc5_A Streptogramin B lactona 67.3 1.1E+02 0.0038 30.9 24.2 180 150-378 83-265 (300)
206 4aow_A Guanine nucleotide-bind 67.2 1.2E+02 0.0041 31.3 20.0 125 151-302 109-237 (340)
207 3jro_A Fusion protein of prote 67.2 58 0.002 39.4 15.4 98 185-302 21-123 (753)
208 3c9f_A 5'-nucleotidase; 2',3'- 67.1 2.6 8.7E-05 49.8 3.0 72 697-775 15-107 (557)
209 2bkl_A Prolyl endopeptidase; m 66.8 99 0.0034 36.8 17.2 201 150-378 147-357 (695)
210 1yr2_A Prolyl oligopeptidase; 65.4 84 0.0029 37.8 16.3 203 150-378 189-401 (741)
211 3sfz_A APAF-1, apoptotic pepti 64.9 1.4E+02 0.0047 38.0 19.0 94 150-264 679-775 (1249)
212 3jyf_A 2',3'-cyclic nucleotide 64.8 4.2 0.00014 44.8 4.0 68 697-774 8-104 (339)
213 3i2n_A WD repeat-containing pr 64.8 85 0.0029 32.7 14.6 65 186-264 32-100 (357)
214 3bg1_A Protein SEC13 homolog; 64.2 1.2E+02 0.0041 31.7 15.6 69 185-270 71-142 (316)
215 3pe7_A Oligogalacturonate lyas 64.0 47 0.0016 35.7 12.5 112 149-272 167-280 (388)
216 4a11_B DNA excision repair pro 64.0 81 0.0028 33.6 14.5 100 150-264 166-277 (408)
217 1nir_A Nitrite reductase; hemo 63.7 59 0.002 37.7 14.0 100 149-263 301-402 (543)
218 3iz6_a 40S ribosomal protein R 63.5 1.6E+02 0.0056 31.5 23.7 134 150-302 180-320 (380)
219 3scy_A Hypothetical bacterial 63.0 1.6E+02 0.0054 31.1 21.6 100 151-264 78-187 (361)
220 1pgu_A Actin interacting prote 62.3 1.6E+02 0.0055 33.5 17.4 150 187-374 175-330 (615)
221 2xbg_A YCF48-like protein; pho 62.2 1.6E+02 0.0056 31.1 19.6 176 158-380 23-201 (327)
222 2ymu_A WD-40 repeat protein; u 62.2 2.1E+02 0.0072 32.3 19.8 122 151-302 367-489 (577)
223 1q7f_A NHL, brain tumor CG1071 62.1 1.4E+02 0.0048 30.3 22.9 167 150-350 100-268 (286)
224 2pm7_B Protein transport prote 61.9 1.5E+02 0.0051 30.5 17.2 119 240-381 171-295 (297)
225 3fvz_A Peptidyl-glycine alpha- 61.6 1.6E+02 0.0056 30.9 27.9 203 150-378 69-283 (329)
226 2xyi_A Probable histone-bindin 61.4 28 0.00097 38.6 10.3 66 187-264 196-264 (430)
227 1pex_A Collagenase-3, MMP-13; 60.2 1.4E+02 0.0049 29.8 18.0 156 179-377 28-197 (207)
228 3dwl_C Actin-related protein 2 60.2 88 0.003 33.2 13.8 98 151-263 78-177 (377)
229 1itv_A MMP9; adaptive molecula 60.0 1.4E+02 0.0048 29.6 17.3 157 178-374 10-176 (195)
230 1yr2_A Prolyl oligopeptidase; 60.0 2.3E+02 0.008 33.8 18.9 151 200-380 293-449 (741)
231 2wdc_A SOXB, sulfur oxidation 59.1 4.9 0.00017 47.5 3.4 36 733-774 126-166 (562)
232 2pbi_B Guanine nucleotide-bind 59.0 1.9E+02 0.0064 30.8 22.1 85 200-302 175-262 (354)
233 4a2l_A BT_4663, two-component 58.9 3E+02 0.01 33.1 22.6 190 151-380 378-579 (795)
234 3odt_A Protein DOA1; ubiquitin 58.6 1.6E+02 0.0054 29.8 18.1 106 240-378 156-261 (313)
235 2xbg_A YCF48-like protein; pho 58.5 1.9E+02 0.0065 30.7 21.4 176 159-380 108-287 (327)
236 3v7d_B Cell division control p 57.7 2.2E+02 0.0075 31.1 27.2 147 185-377 280-426 (464)
237 2dg1_A DRP35, lactonase; beta 56.9 1.6E+02 0.0056 30.5 15.1 128 232-378 49-177 (333)
238 2z06_A Putative uncharacterize 56.7 11 0.00037 39.5 5.2 67 698-776 1-70 (252)
239 4ggc_A P55CDC, cell division c 56.6 1.7E+02 0.006 29.6 19.8 94 150-264 89-182 (318)
240 2qc5_A Streptogramin B lactona 56.4 1.7E+02 0.0058 29.5 27.1 181 150-378 41-223 (300)
241 1pjx_A Dfpase, DIISOPROPYLFLUO 56.3 1.8E+02 0.0061 29.7 15.5 88 201-299 46-135 (314)
242 1pby_B Quinohemoprotein amine 55.8 1.8E+02 0.0063 29.7 15.6 48 150-211 115-164 (337)
243 3dm0_A Maltose-binding peripla 55.7 2.3E+02 0.0078 33.4 17.6 97 186-302 396-494 (694)
244 3v9f_A Two-component system se 55.4 67 0.0023 38.9 13.0 129 150-300 515-646 (781)
245 3bg1_A Protein SEC13 homolog; 54.5 37 0.0013 35.8 9.3 30 343-381 273-303 (316)
246 4h5i_A Guanine nucleotide-exch 54.4 2.3E+02 0.0078 30.3 16.7 147 200-375 156-303 (365)
247 1t70_A Phosphatase; crystal, X 54.0 15 0.00052 38.5 5.8 66 698-775 1-69 (255)
248 2aq5_A Coronin-1A; WD40 repeat 53.9 2.3E+02 0.008 30.3 21.8 155 184-374 93-256 (402)
249 3o4h_A Acylamino-acid-releasin 53.8 55 0.0019 37.8 11.4 183 152-378 134-320 (582)
250 3dm0_A Maltose-binding peripla 53.4 3.3E+02 0.011 31.9 21.5 182 150-377 452-637 (694)
251 1yfq_A Cell cycle arrest prote 53.1 1.3E+02 0.0043 31.2 13.3 96 185-302 23-122 (342)
252 3b7f_A Glycosyl hydrolase, BNR 51.0 2.7E+02 0.0092 30.2 19.8 195 151-380 32-270 (394)
253 4aow_A Guanine nucleotide-bind 50.6 2.2E+02 0.0076 29.1 17.6 62 186-264 186-247 (340)
254 3g4e_A Regucalcin; six bladed 50.0 2.3E+02 0.0079 29.1 16.3 90 185-297 25-114 (297)
255 2pm7_B Protein transport prote 49.5 2.3E+02 0.0079 29.0 18.6 64 185-264 67-133 (297)
256 3dr2_A Exported gluconolactona 49.1 2.4E+02 0.0083 29.1 18.1 192 150-379 67-274 (305)
257 2p4o_A Hypothetical protein; p 48.1 2.5E+02 0.0087 29.0 23.8 95 150-264 53-148 (306)
258 1k32_A Tricorn protease; prote 48.0 4.9E+02 0.017 32.3 23.3 199 150-379 33-242 (1045)
259 3oyo_A Hemopexin fold protein 47.5 66 0.0023 32.9 9.3 109 183-316 69-197 (225)
260 3ei3_B DNA damage-binding prot 47.3 2.8E+02 0.0095 29.3 17.7 97 186-302 87-185 (383)
261 4e54_B DNA damage-binding prot 46.3 1.4E+02 0.0048 32.8 12.8 21 239-264 308-328 (435)
262 3e5z_A Putative gluconolactona 45.8 2.6E+02 0.0088 28.5 17.2 154 185-375 40-206 (296)
263 2xyi_A Probable histone-bindin 44.5 1.3E+02 0.0045 33.0 12.3 20 239-263 141-160 (430)
264 3iuj_A Prolyl endopeptidase; h 44.3 4.6E+02 0.016 30.9 18.1 152 201-381 259-414 (693)
265 2mad_H Methylamine dehydrogena 43.9 1.5E+02 0.0051 32.3 12.4 69 184-264 278-351 (373)
266 3k26_A Polycomb protein EED; W 43.7 2.7E+02 0.0091 28.8 14.1 97 185-302 85-183 (366)
267 2hes_X YDR267CP; beta-propelle 43.1 3.1E+02 0.011 28.6 17.8 30 343-381 164-193 (330)
268 1pgu_A Actin interacting prote 42.4 4.1E+02 0.014 29.9 18.3 154 184-376 29-196 (615)
269 3k26_A Polycomb protein EED; W 42.3 3E+02 0.01 28.3 16.3 145 201-374 44-194 (366)
270 3hxj_A Pyrrolo-quinoline quino 42.0 3E+02 0.01 28.2 16.5 141 182-374 105-246 (330)
271 1itv_A MMP9; adaptive molecula 41.8 1.3E+02 0.0044 29.8 10.3 93 184-299 64-164 (195)
272 2ece_A 462AA long hypothetical 41.5 4.4E+02 0.015 29.9 17.2 129 184-318 25-174 (462)
273 1pby_B Quinohemoprotein amine 41.3 3E+02 0.01 28.0 22.5 103 150-264 11-125 (337)
274 1qks_A Cytochrome CD1 nitrite 40.5 3.7E+02 0.013 31.1 15.7 208 150-378 320-544 (567)
275 2yeq_A Apased, PHOD, alkaline 39.9 29 0.001 40.4 5.9 24 884-907 359-384 (527)
276 4h1s_A 5'-nucleotidase; hydrol 39.2 29 0.00098 40.4 5.7 66 699-774 5-95 (530)
277 2ece_A 462AA long hypothetical 38.9 4.2E+02 0.014 30.0 15.0 112 148-264 104-238 (462)
278 1k32_A Tricorn protease; prote 37.7 4.5E+02 0.015 32.7 16.9 105 150-273 358-469 (1045)
279 3c75_H MADH, methylamine dehyd 37.6 4.7E+02 0.016 29.1 22.4 104 150-264 99-210 (426)
280 2ghs_A AGR_C_1268P; regucalcin 37.2 3.8E+02 0.013 28.0 18.3 150 184-373 60-213 (326)
281 1xfd_A DIP, dipeptidyl aminope 36.4 5.7E+02 0.019 29.7 19.6 62 148-219 89-150 (723)
282 1rwi_B Serine/threonine-protei 36.4 3.3E+02 0.011 26.9 17.6 154 179-376 28-184 (270)
283 2oiz_A Aromatic amine dehydrog 36.2 4.2E+02 0.014 28.2 24.6 105 149-264 30-141 (361)
284 3lrv_A PRE-mRNA-splicing facto 35.9 3.9E+02 0.013 27.7 20.3 64 185-264 139-202 (343)
285 1flg_A Protein (quinoprotein e 34.7 1.3E+02 0.0043 35.3 10.4 81 200-297 465-545 (582)
286 2p9w_A MAL S 1 allergenic prot 34.3 4.1E+02 0.014 28.7 13.4 147 184-354 147-306 (334)
287 3of7_A Regulator of chromosome 33.0 2E+02 0.007 32.4 11.6 63 229-300 266-340 (473)
288 3kci_A Probable E3 ubiquitin-p 32.8 5E+02 0.017 28.1 18.3 19 229-247 168-186 (389)
289 2cn3_A Xyloglucanase, beta-1,4 32.7 7E+02 0.024 29.7 27.6 212 151-381 46-292 (737)
290 3hrp_A Uncharacterized protein 32.4 5.3E+02 0.018 28.1 25.0 194 150-380 152-362 (409)
291 2hz6_A Endoplasmic reticulum t 31.8 12 0.00041 41.2 0.7 143 94-297 1-145 (369)
292 1su3_A Interstitial collagenas 31.7 3.7E+02 0.012 30.3 13.1 106 184-318 318-433 (450)
293 1pex_A Collagenase-3, MMP-13; 31.3 4E+02 0.014 26.5 14.2 105 184-318 79-193 (207)
294 3o4h_A Acylamino-acid-releasin 30.7 6E+02 0.021 28.7 15.4 107 184-317 121-227 (582)
295 3ba0_A Macrophage metalloelast 30.4 5.6E+02 0.019 27.8 17.5 160 178-377 184-355 (365)
296 1xfd_A DIP, dipeptidyl aminope 29.8 6.6E+02 0.023 29.1 15.9 109 151-272 38-150 (723)
297 3sjl_D Methylamine dehydrogena 27.8 6.4E+02 0.022 27.7 23.5 105 149-264 58-170 (386)
298 3mvd_K Regulator of chromosome 26.5 6.5E+02 0.022 27.4 15.7 19 282-300 303-321 (423)
299 1hxn_A Hemopexin, HPX; heme, b 26.2 3.9E+02 0.013 26.9 10.9 60 238-315 28-88 (219)
300 3hx6_A Type 4 fimbrial biogene 25.5 8.4E+02 0.029 28.3 18.7 106 151-265 165-286 (570)
301 1su3_A Interstitial collagenas 25.5 7.5E+02 0.026 27.7 17.9 156 179-377 267-437 (450)
302 3ott_A Two-component system se 24.4 4.6E+02 0.016 31.2 13.2 98 150-270 493-591 (758)
303 3sjl_D Methylamine dehydrogena 24.3 1.5E+02 0.0052 32.8 8.0 69 184-264 291-364 (386)
304 3a0f_A Xyloglucanase; beta-pro 23.4 1E+03 0.034 28.5 26.1 211 151-381 44-293 (763)
305 2ymu_A WD-40 repeat protein; u 23.3 8E+02 0.027 27.3 21.4 122 150-301 284-406 (577)
306 1erj_A Transcriptional repress 23.2 6.9E+02 0.024 26.5 19.1 95 184-302 134-229 (393)
307 3gre_A Serine/threonine-protei 22.9 7.1E+02 0.024 26.5 14.4 96 150-264 192-293 (437)
308 1qhu_A Protein (hemopexin); be 22.8 8.5E+02 0.029 27.4 17.1 59 184-264 158-216 (460)
309 3mvd_K Regulator of chromosome 22.6 7.6E+02 0.026 26.8 25.6 63 177-247 137-206 (423)
310 3gre_A Serine/threonine-protei 21.8 7.4E+02 0.025 26.3 17.7 65 185-264 182-246 (437)
311 4a5s_A Dipeptidyl peptidase 4 21.6 1E+03 0.035 27.9 16.8 20 148-167 90-109 (740)
312 1gen_A Gelatinase A; hydrolase 21.3 6.2E+02 0.021 25.2 18.5 157 177-374 33-204 (218)
313 3c0t_A Mediator of RNA polymer 20.7 73 0.0025 32.0 3.9 39 881-922 103-141 (207)
No 1
>3e7a_A PP-1A, serine/threonine-protein phosphatase PP1-alpha Ca subunit; carbohydrate metabolism, cell cycle, cell division; HET: 1ZN; 1.63A {Homo sapiens} SCOP: d.159.1.3 PDB: 3e7b_A* 3egg_A* 3egh_A* 3hvq_A 3v4y_A* 3n5u_A 1jk7_A* 1it6_A* 2bcd_A* 2bdx_A* 2o8g_A 2o8a_A 1u32_A* 1s70_A*
Probab=100.00 E-value=2.5e-70 Score=596.11 Aligned_cols=291 Identities=47% Similarity=0.856 Sum_probs=275.9
Q ss_pred HHHHHHHHhCCCCCCCCCccccccCHHHHHHHHHHHHHHHhcCCCeeeecCCEEEEecCCCCHHHHHHHHHHhCCCCCCC
Q 002047 648 PKKVIAHLLKPRGWKPPVRRQFFLDCNEIADLCDSAERIFSSEPSVLQLKAPIKIFGDLHGQFGDLMRLFDEYGSPSTAG 727 (975)
Q Consensus 648 ~~~~i~~l~~~~~~~~~~~~~~~l~~~~i~~l~~~~~~~~~~ep~~l~l~~~i~vvGDiHG~~~~L~~ll~~~g~~~~~~ 727 (975)
++++|++|++.+.|++. ..+.|+++++..||++|+++|.+||+++++++|++||||||||+.+|+++|+..++++..
T Consensus 8 ~d~~i~~l~~~~~~~~~--~~~~l~~~~~~~l~~~~~~il~~ep~ll~~~~~i~viGDIHG~~~~L~~ll~~~g~~~~~- 84 (299)
T 3e7a_A 8 LDSIIGRLLEVQGSRPG--KNVQLTENEIRGLCLKSREIFLSQPILLELEAPLKICGDIHGQYYDLLRLFEYGGFPPES- 84 (299)
T ss_dssp HHHHHHHHHTTTTSCTT--CCCCCCHHHHHHHHHHHHHHHHHSCSEEEECSSEEEECBCTTCHHHHHHHHHHHCSTTSS-
T ss_pred HHHHHHHHHhccccCCC--cccCCCHHHHHHHHHHHHHHHHhCCCeeecCCCEEEEecCCCCHHHHHHHHHHhCCCCCc-
Confidence 78999999998877654 345689999999999999999999999999999999999999999999999999998765
Q ss_pred CccceeEEEeccccCCCCChHHHHHHHHHhhhcCCCCEEEEeccccccchhhhcCChHHHHHHhCCcccchhhhhhhccc
Q 002047 728 DIAYIDYLFLGDYVDRGQHSLETITLLLALKVEYPNNVHLIRGNHEAADINALFGFRIECIERMGERDGIWAWHRINRLF 807 (975)
Q Consensus 728 ~~~~~~~vfLGDyVDRG~~s~evl~ll~~lk~~~P~~v~llrGNHE~~~~~~~~gf~~e~~~~~g~~~~~~~~~~~~~~f 807 (975)
+|||||||||||++|+||+.+|++||+.||++|++||||||.+.++..|||++||.++|+ ..+|+.+.++|
T Consensus 85 -----~~vfLGD~VDrG~~s~evl~lL~~lk~~~p~~v~~lrGNHE~~~i~~~ygF~~e~~~ky~----~~l~~~~~~~f 155 (299)
T 3e7a_A 85 -----NYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASINRIYGFYDECKRRYN----IKLWKTFTDCF 155 (299)
T ss_dssp -----CEEECSCCSSSSSCHHHHHHHHHHHHHHSTTTEEECCCTTSSHHHHHHHSHHHHHHHHSC----HHHHHHHHHHH
T ss_pred -----cEEeCCcccCCCCCcHHHHHHHHHHHhhCCCcEEEEecCchhhhhcccccchHHHHHHhh----HHHHHHHHHHH
Confidence 799999999999999999999999999999999999999999999999999999999995 46999999999
Q ss_pred cccceEEEEcceEEEecCCccCcccCHhhhhhccCCcccCCCCcceeccccCCCCCCCCCCCcccCCCCCceeeeCHHHH
Q 002047 808 NWLPLAALIEKKIICMHGGIGRSINHVEQIENLQRPITMEAGSIVLMDLLWSDPTENDSVEGLRPNARGPGLVTFGPDRV 887 (975)
Q Consensus 808 ~~LPlaa~i~~~il~vHgGi~~~~~~~~~i~~i~rp~~~~~~~~~~~dllWsdP~~~~~~~~~~~n~rg~~~~~fg~~~~ 887 (975)
++||+++++++++|||||||+|.+.++++|+++.||.+++..+ +++|||||||.. ...+|.+|.||.| +.||++++
T Consensus 156 ~~LPlaaii~~~il~vHGGlsp~~~~l~~i~~i~R~~~~p~~~-~~~dllWsDP~~--~~~~~~~~~RG~~-~~fG~~~~ 231 (299)
T 3e7a_A 156 NCLPIAAIVDEKIFCCHGGLSPDLQSMEQIRRIMRPTDVPDQG-LLCDLLWSDPDK--DVQGWGENDRGVS-FTFGAEVV 231 (299)
T ss_dssp TTCCCEEEETTTEEEESSCCCTTCCCTHHHHTCCSSCCCCSSS-HHHHHHHCEECT--TCSSEEECTTSSS-EEECHHHH
T ss_pred hhCCceEEECCeEEEEcCccCcccCCHHHHHhccCCCcCCcch-hhhhhhcCCccc--cccCcccCCCCcc-eeeCHHHH
Confidence 9999999999999999999999999999999999999887665 899999999985 3579999999999 78999999
Q ss_pred HHHHHHcCCeEEEEeccccccceEEecCCeEEEEeccccccCCCCCcEEEEEEcCCceEEeEEecCC
Q 002047 888 MEFCNNNDLQLIVRAHECVMDGFERFAQGHLITLFSATNYCGTANNAGAILVLGRDLVVVPKLIHPL 954 (975)
Q Consensus 888 ~~fl~~~~l~~iiR~H~~~~~G~~~~~~~~~iTvfSa~~y~~~~~n~ga~l~i~~~~~~~~~~~~~~ 954 (975)
++||++|++++||||||++++||+++++++|||||||||||+..+|+||+|.+++++.+++++++|.
T Consensus 232 ~~fl~~n~l~~IiR~Hq~v~~Gy~~~~~~~~iTvfSapnY~~~~~N~~a~l~~~~~~~~~~~~~~~~ 298 (299)
T 3e7a_A 232 AKFLHKHDLDLICRAHQVVEDGYEFFAKRQLVTLFSAPNYCGEFDNAGAMMSVDETLMCSFQILKPA 298 (299)
T ss_dssp HHHHHHHTCSEEEECCSCCTTSEEEETTTTEEEEBCCSSGGGTCCCCEEEEEECTTCCEEEEEECCC
T ss_pred HHHHHHCCCeEEEEcCeeeecceEEecCCeEEEEECCcccCCCCCccEEEEEECCCCcEEEEEecCC
Confidence 9999999999999999999999999999999999999999999999999999999999999999884
No 2
>3h63_A Serine/threonine-protein phosphatase 5; metalloenzyme, inhibitors, drug design, cytoplasm, hydrolase, iron, manganese, metal-binding, nucleus; HET: NHC; 1.30A {Homo sapiens} SCOP: d.159.1.3 PDB: 3h60_A* 3h61_A* 3h62_C* 3h64_A* 3h66_A 3h67_A* 3h68_A* 3h69_A* 1s95_A
Probab=100.00 E-value=2.2e-66 Score=569.09 Aligned_cols=291 Identities=32% Similarity=0.585 Sum_probs=270.7
Q ss_pred hhHHHHHHHHhCCCCCCCCCccccccCHHHHHHHHHHHHHHHhcCCCeeeecCC----EEEEecCCCCHHHHHHHHHHhC
Q 002047 646 SVPKKVIAHLLKPRGWKPPVRRQFFLDCNEIADLCDSAERIFSSEPSVLQLKAP----IKIFGDLHGQFGDLMRLFDEYG 721 (975)
Q Consensus 646 ~~~~~~i~~l~~~~~~~~~~~~~~~l~~~~i~~l~~~~~~~~~~ep~~l~l~~~----i~vvGDiHG~~~~L~~ll~~~g 721 (975)
++++++|++|.+.+ .|+++++.+||.+|+++|++||++++++.| ++||||||||+.+|+++|+..+
T Consensus 14 ~~~~~~~~~~~~~~----------~l~~~~~~~l~~~~~~il~~ep~l~~l~~p~~~ri~viGDIHG~~~~L~~ll~~~g 83 (315)
T 3h63_A 14 SFMKELMQWYKDQK----------KLHRKCAYQILVQVKEVLSKLSTLVETTLKETEKITVCGDTHGQFYDLLNIFELNG 83 (315)
T ss_dssp HHHHHHHHHHHTTC----------CCCHHHHHHHHHHHHHHHHTSCSEEEECCCTTCEEEEECCCTTCHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHcCC----------CCCHHHHHHHHHHHHHHHHhCCCeEEEecCCCceEEEEecCCCCHHHHHHHHHHhC
Confidence 56788999998753 588999999999999999999999999877 9999999999999999999999
Q ss_pred CCCCCCCccceeEEEeccccCCCCChHHHHHHHHHhhhcCCCCEEEEeccccccchhhhcCChHHHHHHhCCcccchhhh
Q 002047 722 SPSTAGDIAYIDYLFLGDYVDRGQHSLETITLLLALKVEYPNNVHLIRGNHEAADINALFGFRIECIERMGERDGIWAWH 801 (975)
Q Consensus 722 ~~~~~~~~~~~~~vfLGDyVDRG~~s~evl~ll~~lk~~~P~~v~llrGNHE~~~~~~~~gf~~e~~~~~g~~~~~~~~~ 801 (975)
+++... +|||||||||||++|+||+.+|++||++||++|++||||||.+.++..|||.+||.++|+. .+|+
T Consensus 84 ~~~~~~-----~~vflGD~VDRG~~s~evl~lL~~lk~~~p~~v~~lrGNHE~~~l~~~ygf~~e~~~k~~~----~l~~ 154 (315)
T 3h63_A 84 LPSETN-----PYIFNGDFVDRGSFSVEVILTLFGFKLLYPDHFHLLRGNHETDNMNQIYGFEGEVKAKYTA----QMYE 154 (315)
T ss_dssp CCBTTB-----CEEEESCCSSSSTTHHHHHHHHHHHHHHSTTTEEEECCTTSSHHHHHHHSHHHHHHHHSCH----HHHH
T ss_pred CCCCCC-----EEEEeCCccCCCcChHHHHHHHHHhhhhcCCcEEEEecCcccccccccccccHHHHHHhhh----HHHH
Confidence 987652 5999999999999999999999999999999999999999999999999999999999953 5999
Q ss_pred hhhccccccceEEEEcceEEEecCCc-cCcccCHhhhhhccCCcccCCCCcceeccccCCCCCCCCCCCcccCCCCCcee
Q 002047 802 RINRLFNWLPLAALIEKKIICMHGGI-GRSINHVEQIENLQRPITMEAGSIVLMDLLWSDPTENDSVEGLRPNARGPGLV 880 (975)
Q Consensus 802 ~~~~~f~~LPlaa~i~~~il~vHgGi-~~~~~~~~~i~~i~rp~~~~~~~~~~~dllWsdP~~~~~~~~~~~n~rg~~~~ 880 (975)
.+.++|++||+++++++++||||||| ++.+.++++|+++.|+.+++..+ +++|||||||.. ..+|.+|.||.| +
T Consensus 155 ~~~~~f~~LPla~ii~~~il~vHGGl~sp~~~~l~~i~~i~R~~~~p~~g-~~~dllWsDP~~---~~g~~~s~RG~g-~ 229 (315)
T 3h63_A 155 LFSEVFEWLPLAQCINGKVLIMHGGLFSEDGVTLDDIRKIERNRQPPDSG-PMCDLLWSDPQP---QNGRSISKRGVS-C 229 (315)
T ss_dssp HHHHHHTTSCSEEEETTTEEECSSCCCSSTTCCHHHHHHCCCSSCCCSSS-HHHHHHHCEECS---SSSEEECTTSSS-E
T ss_pred HHHHHHhcCCcEEEEcCCEEEeCCCCCCcccCCHHHHHhCcccccccccc-hhhhheecCCCC---CCCcCcCCCCce-E
Confidence 99999999999999999999999999 78889999999999999887655 899999999985 468999999999 6
Q ss_pred eeCHHHHHHHHHHcCCeEEEEeccccccceEEecCCeEEEEeccccccCCCCCcEEEEEEc-CCceEEeEEecCCCCCCC
Q 002047 881 TFGPDRVMEFCNNNDLQLIVRAHECVMDGFERFAQGHLITLFSATNYCGTANNAGAILVLG-RDLVVVPKLIHPLPPAIS 959 (975)
Q Consensus 881 ~fg~~~~~~fl~~~~l~~iiR~H~~~~~G~~~~~~~~~iTvfSa~~y~~~~~n~ga~l~i~-~~~~~~~~~~~~~~~~~~ 959 (975)
.||++++++||++||+++||||||++++||+++++++|||||||||||+..+|+||+|.++ +++...++++.+.+....
T Consensus 230 ~fg~~~~~~fl~~n~l~~iiR~Hq~~~~Gy~~~~~~~~iTvfSapnY~~~~~N~~a~~~~~~~~~~~~~~~f~~~~~~~~ 309 (315)
T 3h63_A 230 QFGPDVTKAFLEENNLDYIIRSHEVKAEGYEVAHGGRCVTVFSAPNYCDQMGNKASYIHLQGSDLRPQFHQFTAVPHPNV 309 (315)
T ss_dssp EECHHHHHHHHHHHTCSEEEECCSCCTTSEEEEGGGTEEEECCCTTGGGTSCCCEEEEEEETTEEEEEEEEECCCCCCSC
T ss_pred EECHHHHHHHHHHcCCcEEEEeceeecCCeEEecCCeEEEEECCcccCCCCCccEEEEEEECCCCeEeeEEEecCCCCCC
Confidence 8999999999999999999999999999999999999999999999999999999999995 678899999998776553
Q ss_pred C
Q 002047 960 S 960 (975)
Q Consensus 960 ~ 960 (975)
.
T Consensus 310 ~ 310 (315)
T 3h63_A 310 K 310 (315)
T ss_dssp C
T ss_pred C
Confidence 3
No 3
>3icf_A PPT, serine/threonine-protein phosphatase T; IRO metalloprotein, structural genomics, PSI-2, protein structu initiative; 2.30A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.5e-66 Score=574.25 Aligned_cols=294 Identities=35% Similarity=0.630 Sum_probs=270.8
Q ss_pred CChhHHHHH-HHHhCCCCCCCCCccccccCHHHHHHHHHHHHHHHhcCCCeeeecCC------EEEEecCCCCHHHHHHH
Q 002047 644 INSVPKKVI-AHLLKPRGWKPPVRRQFFLDCNEIADLCDSAERIFSSEPSVLQLKAP------IKIFGDLHGQFGDLMRL 716 (975)
Q Consensus 644 ~~~~~~~~i-~~l~~~~~~~~~~~~~~~l~~~~i~~l~~~~~~~~~~ep~~l~l~~~------i~vvGDiHG~~~~L~~l 716 (975)
..++++++| ++|.+.+ .|+++++.+||++|+++|++||+++++..| ++||||||||+.+|+++
T Consensus 13 ~~~~~~~~i~~~~~~~~----------~l~~~~~~~l~~~~~~il~~ep~~~~l~~p~~~~~ri~viGDIHG~~~~L~~l 82 (335)
T 3icf_A 13 SQEFISKMVNDLFLKGK----------YLPKKYVAAIISHADTLFRQEPSMVELENNSTPDVKISVCGDTHGQFYDVLNL 82 (335)
T ss_dssp CHHHHHHHHHHTGGGTC----------CCCHHHHHHHHHHHHHHHHTSCSEEEECCSSSTTCEEEEECCCTTCHHHHHHH
T ss_pred CHHHHHHHHHHHHHcCC----------CCCHHHHHHHHHHHHHHHHhCCCeEEecCCcccCceEEEEecCCCCHHHHHHH
Confidence 346688899 7776542 589999999999999999999999999999 99999999999999999
Q ss_pred HHHhCCCCCCCCccceeEEEeccccCCCCChHHHHHHHHHhhhcCCCCEEEEeccccccchhhhcCChHHHHHHhCCccc
Q 002047 717 FDEYGSPSTAGDIAYIDYLFLGDYVDRGQHSLETITLLLALKVEYPNNVHLIRGNHEAADINALFGFRIECIERMGERDG 796 (975)
Q Consensus 717 l~~~g~~~~~~~~~~~~~vfLGDyVDRG~~s~evl~ll~~lk~~~P~~v~llrGNHE~~~~~~~~gf~~e~~~~~g~~~~ 796 (975)
|+..|+++... +|||||||||||++|+||+.+|++||++||++|++||||||.+.++..|||..||.++|+
T Consensus 83 l~~~g~~~~~~-----~~vflGD~VDRG~~s~evl~lL~~lk~~~p~~v~llrGNHE~~~i~~~ygf~~e~~~k~~---- 153 (335)
T 3icf_A 83 FRKFGKVGPKH-----TYLFNGDFVDRGSWSCEVALLFYCLKILHPNNFFLNRGNHESDNMNKIYGFEDECKYKYS---- 153 (335)
T ss_dssp HHHHCCCBTTE-----EEEECSCCSSSSTTHHHHHHHHHHHHHHCTTTEEECCCTTSSHHHHHHHSHHHHHHHHSC----
T ss_pred HHHcCCCCCCc-----EEEEeCCccCCCcChHHHHHHHHHHhhhCCCcEEEecCchhhhhhhhccccchHhHhhcc----
Confidence 99999986542 699999999999999999999999999999999999999999999999999999999995
Q ss_pred chhhhhhhccccccceEEEEcceEEEecCCc-cCcccCHhhhhhccCCcccCCCCcceeccccCCCCCCCCCCCcccCCC
Q 002047 797 IWAWHRINRLFNWLPLAALIEKKIICMHGGI-GRSINHVEQIENLQRPITMEAGSIVLMDLLWSDPTENDSVEGLRPNAR 875 (975)
Q Consensus 797 ~~~~~~~~~~f~~LPlaa~i~~~il~vHgGi-~~~~~~~~~i~~i~rp~~~~~~~~~~~dllWsdP~~~~~~~~~~~n~r 875 (975)
..+|+.+.++|++||+++++++++||||||| +|.+.++++|+.|.|+.+++..+ +++|||||||.. ..+|.+|.|
T Consensus 154 ~~l~~~~~~~f~~LPlaaii~~~il~vHGGl~sp~~~~ld~i~~i~R~~~~p~~g-~~~dlLWSDP~~---~~g~~~s~R 229 (335)
T 3icf_A 154 QRIFNMFAQSFESLPLATLINNDYLVMHGGLPSDPSATLSDFKNIDRFAQPPRDG-AFMELLWADPQE---ANGMGPSQR 229 (335)
T ss_dssp HHHHHHHHHHHTTSCSEEEETTTEEECSSCCCSCTTCCHHHHHTCCCSSCCCSSS-HHHHHHHCEECS---SSSEEECCC
T ss_pred HHHHHHHHHHHhhcceeEEEcCcEEEecCCcCCCccCCHHHHHhCcccccccccc-chhhhhccCCCC---cCCcccCCC
Confidence 4699999999999999999999999999999 78999999999999998877655 999999999985 468999999
Q ss_pred CCceeeeCHHHHHHHHHHcCCeEEEEeccccccceEEecCCeEEEEeccccccCCCCCcEEEEEEcC-----------Cc
Q 002047 876 GPGLVTFGPDRVMEFCNNNDLQLIVRAHECVMDGFERFAQGHLITLFSATNYCGTANNAGAILVLGR-----------DL 944 (975)
Q Consensus 876 g~~~~~fg~~~~~~fl~~~~l~~iiR~H~~~~~G~~~~~~~~~iTvfSa~~y~~~~~n~ga~l~i~~-----------~~ 944 (975)
|.| +.||++++++||++|++++||||||++++||+++++++|||||||||||+..+|+||||.|++ ++
T Consensus 230 G~g-~~FG~~~~~~fl~~n~l~~IiR~Hq~~~~Gy~~~~~~~liTvfSapnYc~~~~N~~a~~~i~~~~~~~~~~~~~~~ 308 (335)
T 3icf_A 230 GLG-HAFGPDITDRFLRNNKLRKIFRSHELRMGGVQFEQKGKLMTVFSAPNYCDSQGNLGGVIHVVPGHGILQAGRNDDQ 308 (335)
T ss_dssp C---EEECHHHHHHHHHHTTCSEEEECSSCCTEEEEEEGGGTEEEECCCTTGGGTSCCEEEEEEECTTCCCCBTTTBCCT
T ss_pred CCc-eeeCHHHHHHHHHHCCCeEEEEcCceecCeEEEecCCcEEEEECCcccCCCCCCceEEEEEecccccccccccccC
Confidence 999 689999999999999999999999999999999999999999999999999999999999999 88
Q ss_pred eEEeEEecCCCCCCCCC
Q 002047 945 VVVPKLIHPLPPAISSP 961 (975)
Q Consensus 945 ~~~~~~~~~~~~~~~~~ 961 (975)
.+.++++.+++....-|
T Consensus 309 ~~~~~~f~~~~~~~~~p 325 (335)
T 3icf_A 309 NLIIETFEAVEHPDIKP 325 (335)
T ss_dssp TEEEEEECCCCCCSCCT
T ss_pred ceeEEEEecCCCCCCCc
Confidence 99999999987665433
No 4
>3ll8_A Serine/threonine-protein phosphatase 2B catalytic alpha isoform; protein-peptide docking, protein targeting, AKA beta-augmentation, calmodulin-binding, membrane, hydrolase; 2.00A {Homo sapiens} PDB: 2p6b_A 1m63_A* 1tco_A* 1mf8_A* 2jog_A
Probab=100.00 E-value=3.5e-66 Score=572.42 Aligned_cols=289 Identities=36% Similarity=0.616 Sum_probs=266.3
Q ss_pred HHHHHHHHhCCCCCCCCCccccccCHHHHHHHHHHHHHHHhcCCCeeeecCCEEEEecCCCCHHHHHHHHHHhCCCCCCC
Q 002047 648 PKKVIAHLLKPRGWKPPVRRQFFLDCNEIADLCDSAERIFSSEPSVLQLKAPIKIFGDLHGQFGDLMRLFDEYGSPSTAG 727 (975)
Q Consensus 648 ~~~~i~~l~~~~~~~~~~~~~~~l~~~~i~~l~~~~~~~~~~ep~~l~l~~~i~vvGDiHG~~~~L~~ll~~~g~~~~~~ 727 (975)
++.++++|++.+ .|+++++.+||++|+++|++||+++++.+|++||||||||+.+|+++|+..+.++.+
T Consensus 30 ~~~~~~~~~~~~----------~l~~~~~~~l~~~~~~il~~ep~ll~~~~pi~ViGDIHG~~~dL~~ll~~~g~~~~~- 98 (357)
T 3ll8_A 30 VDILKAHLMKEG----------RLEESVALRIITEGASILRQEKNLLDIDAPVTVCGDIHGQFFDLMKLFEVGGSPANT- 98 (357)
T ss_dssp HHHHHHHHHTTC----------CBCHHHHHHHHHHHHHHHHTSCSEEEECSSEEEECCCTTCHHHHHHHHHHHCCTTTC-
T ss_pred HHHHHHHHHhCC----------CCCHHHHHHHHHHHHHHHHhCCCeEEecccceeeccCCCCHHHHHHHHHhcCCCCCc-
Confidence 678899998753 589999999999999999999999999999999999999999999999999988765
Q ss_pred CccceeEEEeccccCCCCChHHHHHHHHHhhhcCCCCEEEEeccccccchhhhcCChHHHHHHhCCcccchhhhhhhccc
Q 002047 728 DIAYIDYLFLGDYVDRGQHSLETITLLLALKVEYPNNVHLIRGNHEAADINALFGFRIECIERMGERDGIWAWHRINRLF 807 (975)
Q Consensus 728 ~~~~~~~vfLGDyVDRG~~s~evl~ll~~lk~~~P~~v~llrGNHE~~~~~~~~gf~~e~~~~~g~~~~~~~~~~~~~~f 807 (975)
+|||||||||||++|+||+.+|++||++||++|++||||||.+.++..|||++||.++|+. .+|+.+.++|
T Consensus 99 -----~~vfLGD~VDRG~~s~Evl~lL~~lk~~~p~~v~llrGNHE~~~i~~~ygF~~E~~~ky~~----~l~~~~~~~f 169 (357)
T 3ll8_A 99 -----RYLFLGDYVDRGYFSIECVLYLWALKILYPKTLFLLRGNHECRHLTEYFTFKQECKIKYSE----RVYDACMDAF 169 (357)
T ss_dssp -----CEEECSCCSSSSTTHHHHHHHHHHHHHHCTTTEEECCCTTSSHHHHHHSSHHHHHHHHSCH----HHHHHHHHHH
T ss_pred -----EEEECCCccCCCcChHHHHHHHHHhhhhcCCcEEEEeCchhhhhhhcccCchhhhhhccch----hHHHHHHHHH
Confidence 8999999999999999999999999999999999999999999999999999999999953 6999999999
Q ss_pred cccceEEEEcceEEEecCCccCcccCHhhhhhccCCcccCCCCcceeccccCCCCCCCC----CCCccc-CCCCCceeee
Q 002047 808 NWLPLAALIEKKIICMHGGIGRSINHVEQIENLQRPITMEAGSIVLMDLLWSDPTENDS----VEGLRP-NARGPGLVTF 882 (975)
Q Consensus 808 ~~LPlaa~i~~~il~vHgGi~~~~~~~~~i~~i~rp~~~~~~~~~~~dllWsdP~~~~~----~~~~~~-n~rg~~~~~f 882 (975)
++||+++++++++|||||||+|.+.++++|++|.|+.+++..+ +++|||||||.+... ..+|.+ +.||.| +.|
T Consensus 170 ~~LPlaaii~~~il~vHGGlsp~l~~ld~I~~i~R~~e~p~~g-~~~DlLWSDP~~~~~~~~~~~~~~~~s~RG~g-~~F 247 (357)
T 3ll8_A 170 DCLPLAALMNQQFLCVHGGLSPEINTLDDIRKLDRFKEPPAYG-PMCDILWSDPLEDFGNEKTQEHFTHNTVRGCS-YFY 247 (357)
T ss_dssp HTSCSEEEETTTEEECSSCCCTTCCSHHHHHTCCCSSCCCSSS-HHHHHHHCEECTTTTSCSCCCSEEECTTTTSS-EEE
T ss_pred HhCCcceEEcccEEEEecCcCcccCCHHHHhhccccccCCccC-chhHhhccCccccccccccccccccCCCCCCc-eEE
Confidence 9999999999999999999999999999999999999887665 899999999986432 245764 589999 689
Q ss_pred CHHHHHHHHHHcCCeEEEEeccccccceEEecCC------eEEEEeccccccCCCCCcEEEEEEcCCceEEeEEecCCCC
Q 002047 883 GPDRVMEFCNNNDLQLIVRAHECVMDGFERFAQG------HLITLFSATNYCGTANNAGAILVLGRDLVVVPKLIHPLPP 956 (975)
Q Consensus 883 g~~~~~~fl~~~~l~~iiR~H~~~~~G~~~~~~~------~~iTvfSa~~y~~~~~n~ga~l~i~~~~~~~~~~~~~~~~ 956 (975)
|++++++||++||+++||||||++++||++++++ +|||||||||||+.++|+||||.+++++ ..++++.+.+-
T Consensus 248 G~~~~~~Fl~~n~l~~IiRaHq~~~~Gy~~~~~~~~~g~~~liTvFSApnYc~~~~N~~a~l~~~~~~-~~~~~f~~~~h 326 (357)
T 3ll8_A 248 SYPAVCEFLQHNNLLSILRAHEAQDAGYRMYRKSQTTGFPSLITIFSAPNYLDVYNNKAAVLKYENNV-MNIRQFNCSPH 326 (357)
T ss_dssp CHHHHHHHHHHTTCSEEEECCSCCTTSEEECCBCTTTSSBSEEEECCCTTGGGTSCCCEEEEEEETTE-EEEEEECCCCC
T ss_pred ChHHHHHHHHHCCCeEEEEeccccccceEEecCCcCCCCCcEEEEECCCccCCCCCccEEEEEEECCc-ceEEEecCCCC
Confidence 9999999999999999999999999999999887 6999999999999999999999998876 67888887765
Q ss_pred CCC
Q 002047 957 AIS 959 (975)
Q Consensus 957 ~~~ 959 (975)
++.
T Consensus 327 p~~ 329 (357)
T 3ll8_A 327 PYW 329 (357)
T ss_dssp CCC
T ss_pred CCc
Confidence 553
No 5
>1fjm_A Protein serine/threonine phosphatase-1 (alpha ISO 1); hydrolase, toxin, hydrolase-hydrolase inhibitor complex; HET: 1ZN; 2.10A {Oryctolagus cuniculus} SCOP: d.159.1.3
Probab=100.00 E-value=2.2e-64 Score=558.74 Aligned_cols=294 Identities=46% Similarity=0.838 Sum_probs=274.2
Q ss_pred HHHHHHHHhCCCCCCCCCccccccCHHHHHHHHHHHHHHHhcCCCeeeecCCEEEEecCCCCHHHHHHHHHHhCCCCCCC
Q 002047 648 PKKVIAHLLKPRGWKPPVRRQFFLDCNEIADLCDSAERIFSSEPSVLQLKAPIKIFGDLHGQFGDLMRLFDEYGSPSTAG 727 (975)
Q Consensus 648 ~~~~i~~l~~~~~~~~~~~~~~~l~~~~i~~l~~~~~~~~~~ep~~l~l~~~i~vvGDiHG~~~~L~~ll~~~g~~~~~~ 727 (975)
++++|+.|++.+.+++. ....|+++++..||++|+++|.+||+++++.+|++||||||||+.+|+++|+..++++.+
T Consensus 9 ~d~~i~~l~~~~~~~~~--~~~~l~~~~~~~l~~~~~~il~~e~~l~~~~~~i~viGDIHG~~~~L~~ll~~~g~~~~~- 85 (330)
T 1fjm_A 9 LDSIIGRLLEVQGSRPG--KNVQLTENEIRGLCLKSREIFLSQPILLELEAPLKICGDIHGQYYDLLRLFEYGGFPPES- 85 (330)
T ss_dssp HHHHHHHHHHTTTTCTT--CCCCCCHHHHHHHHHHHHHHHHHSCSEEEECSSEEEECBCTTCHHHHHHHHHHHCSTTSS-
T ss_pred HHHHHHHHHhccccCCc--ccCCCCHHHHHHHHHHHHHHHHhCCCeEeecCceEEecCCCCCHHHHHHHHHHhCCCCcc-
Confidence 78899999987665543 244689999999999999999999999999999999999999999999999999998765
Q ss_pred CccceeEEEeccccCCCCChHHHHHHHHHhhhcCCCCEEEEeccccccchhhhcCChHHHHHHhCCcccchhhhhhhccc
Q 002047 728 DIAYIDYLFLGDYVDRGQHSLETITLLLALKVEYPNNVHLIRGNHEAADINALFGFRIECIERMGERDGIWAWHRINRLF 807 (975)
Q Consensus 728 ~~~~~~~vfLGDyVDRG~~s~evl~ll~~lk~~~P~~v~llrGNHE~~~~~~~~gf~~e~~~~~g~~~~~~~~~~~~~~f 807 (975)
+|||||||||||++|+|||.+|++||+.||.++++||||||.+.++..|||.+||.++|+. .+|+.+.++|
T Consensus 86 -----~~vflGD~VDRG~~s~evl~lL~~lk~~~p~~v~~lrGNHE~~~l~~~~gf~~e~~~~y~~----~l~~~~~~~f 156 (330)
T 1fjm_A 86 -----NYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASINRIYGFYDECKRRYNI----KLWKTFTDCF 156 (330)
T ss_dssp -----CEEECSCCSSSSSCHHHHHHHHHHHHHHSTTTEEECCCTTSSHHHHHHHSHHHHHHHHSCH----HHHHHHHHHH
T ss_pred -----eEEeCCCcCCCCCChHHHHHHHHHhhhhcCCceEEecCCchHhhhhhhhhhhhhhhhhccH----HHHHHHHHHH
Confidence 7999999999999999999999999999999999999999999999999999999999853 5899999999
Q ss_pred cccceEEEEcceEEEecCCccCcccCHhhhhhccCCcccCCCCcceeccccCCCCCCCCCCCcccCCCCCceeeeCHHHH
Q 002047 808 NWLPLAALIEKKIICMHGGIGRSINHVEQIENLQRPITMEAGSIVLMDLLWSDPTENDSVEGLRPNARGPGLVTFGPDRV 887 (975)
Q Consensus 808 ~~LPlaa~i~~~il~vHgGi~~~~~~~~~i~~i~rp~~~~~~~~~~~dllWsdP~~~~~~~~~~~n~rg~~~~~fg~~~~ 887 (975)
++||+++++++++||||||++|.+.++++|+.+.||.+.+..+ +++|+|||||.. ...+|.+|.||.+ +.||++++
T Consensus 157 ~~LPl~~~i~~~i~~vHgGl~p~~~~l~qi~~i~r~~e~~~~g-~~~dlLWsdp~~--~~~~w~~~~rG~~-~~fG~~~~ 232 (330)
T 1fjm_A 157 NCLPIAAIVDEKIFCCHGGLSPDLQSMEQIRRIMRPTDVPDQG-LLCDLLWSDPDK--DVQGWGENDRGVS-FTFGAEVV 232 (330)
T ss_dssp TTCCCEEEETTTEEEESSCCCTTCSCHHHHHHCCSSCCCCSSS-HHHHHHHCEECT--TCSSEEECTTSSS-EEECHHHH
T ss_pred HhCCceEEEcCcEEEEccCCCcccCCHHHHhhhhcCccCcccc-hHHHHHhcCCcc--ccCCcCcccCCCc-eeeChHHH
Confidence 9999999999999999999999999999999999999876554 889999999986 3478999999999 78999999
Q ss_pred HHHHHHcCCeEEEEeccccccceEEecCCeEEEEeccccccCCCCCcEEEEEEcCCceEEeEEecCCCCC
Q 002047 888 MEFCNNNDLQLIVRAHECVMDGFERFAQGHLITLFSATNYCGTANNAGAILVLGRDLVVVPKLIHPLPPA 957 (975)
Q Consensus 888 ~~fl~~~~l~~iiR~H~~~~~G~~~~~~~~~iTvfSa~~y~~~~~n~ga~l~i~~~~~~~~~~~~~~~~~ 957 (975)
++||+.+++++||||||++++||+++++++|||||||||||+.++|+||||.|++++.+++++++|.+..
T Consensus 233 ~~fl~~~~l~liir~Hq~v~~Gy~~~~~~~lvTvfSapnY~~~~~N~ga~l~i~~~~~~~~~~~~~~~~~ 302 (330)
T 1fjm_A 233 AKFLHKHDLDLICRAHQVVEDGYEFFAKRQLVTLFSAPNYCGEFDNAGAMMSVDETLMCSFQILKPADKN 302 (330)
T ss_dssp HHHHHHHTCSEEEECCSCCTTSEEEETTTTEEEEBCCTTCCSSSCCCEEEEEECTTCCEEEEEECCCC--
T ss_pred HHHHHhCCCceEecccccccCCeEEccCCeEEEEeCCcccccCCCCcEEEEEECCCCcEeEEEecCCccc
Confidence 9999999999999999999999999999999999999999999999999999999999999999998765
No 6
>2ie4_C PP2A-alpha;, serine/threonine-protein phosphatase 2A catalytic subunit alpha isoform; protein-protein complex, heat repeat, signaling protein; HET: OKA; 2.60A {Homo sapiens} SCOP: d.159.1.3 PDB: 2npp_C* 3dw8_C* 3k7v_C* 3k7w_C* 3c5w_C 2ie3_C* 3fga_C* 2iae_C* 3p71_C* 2nym_C* 2nyl_C*
Probab=100.00 E-value=1.7e-63 Score=548.83 Aligned_cols=287 Identities=39% Similarity=0.726 Sum_probs=269.4
Q ss_pred hHHHHHHHHhCCCCCCCCCccccccCHHHHHHHHHHHHHHHhcCCCeeeecCCEEEEecCCCCHHHHHHHHHHhCCCCCC
Q 002047 647 VPKKVIAHLLKPRGWKPPVRRQFFLDCNEIADLCDSAERIFSSEPSVLQLKAPIKIFGDLHGQFGDLMRLFDEYGSPSTA 726 (975)
Q Consensus 647 ~~~~~i~~l~~~~~~~~~~~~~~~l~~~~i~~l~~~~~~~~~~ep~~l~l~~~i~vvGDiHG~~~~L~~ll~~~g~~~~~ 726 (975)
.++.+|+.|++.+ .|+++++.+||++|+++|++||+++++.+|++||||||||+.+|+++|+..+.++..
T Consensus 9 ~~~~~i~~~~~~~----------~l~~~~~~~l~~~~~~il~~e~~~~~~~~~i~viGDIHG~~~~L~~ll~~~~~~~~~ 78 (309)
T 2ie4_C 9 ELDQWIEQLNECK----------QLSESQVKSLCEKAKEILTKESNVQEVRCPVTVCGDVHGQFHDLMELFRIGGKSPDT 78 (309)
T ss_dssp HHHHHHHHHTTTC----------CCCHHHHHHHHHHHHHHHHHSCTTEEECSSEEEECCCTTCHHHHHHHHHHHCCTTTS
T ss_pred HHHHHHHHHHcCC----------CCCHHHHHHHHHHHHHHHHhCCCEEeccCCEEEEecCCCCHHHHHHHHHHcCCCCCC
Confidence 3688999987642 589999999999999999999999999999999999999999999999999987755
Q ss_pred CCccceeEEEeccccCCCCChHHHHHHHHHhhhcCCCCEEEEeccccccchhhhcCChHHHHHHhCCcccchhhhhhhcc
Q 002047 727 GDIAYIDYLFLGDYVDRGQHSLETITLLLALKVEYPNNVHLIRGNHEAADINALFGFRIECIERMGERDGIWAWHRINRL 806 (975)
Q Consensus 727 ~~~~~~~~vfLGDyVDRG~~s~evl~ll~~lk~~~P~~v~llrGNHE~~~~~~~~gf~~e~~~~~g~~~~~~~~~~~~~~ 806 (975)
+|||||||||||++|+|||.+|++||++||.++++||||||.+.++..|||.+||.++||.. .+|+.+.++
T Consensus 79 ------~~vflGD~VDRG~~s~evl~lL~~lk~~~p~~v~~lrGNHE~~~l~~~~gf~~e~~~~yg~~---~l~~~~~~~ 149 (309)
T 2ie4_C 79 ------NYLFMGDYVDRGYYSVETVTLLVALKVRYRERITILRGNHESRQITQVYGFYDECLRKYGNA---NVWKYFTDL 149 (309)
T ss_dssp ------CEEECSCCSSSSTTHHHHHHHHHHHHHHCTTTEEECCCTTSSTTGGGTSSHHHHHHHHSSST---HHHHHHHHH
T ss_pred ------EEEEeCCccCCCCChHHHHHHHHHHHhhCCCcEEEEeCCCCHHHHhhhhhhhHHHHhhcccH---HHHHHHHHH
Confidence 79999999999999999999999999999999999999999999999999999999999864 589999999
Q ss_pred ccccceEEEEcceEEEecCCccCcccCHhhhhhccCCcccCCCCcceeccccCCCCCCCCCCCcccCCCCCceeeeCHHH
Q 002047 807 FNWLPLAALIEKKIICMHGGIGRSINHVEQIENLQRPITMEAGSIVLMDLLWSDPTENDSVEGLRPNARGPGLVTFGPDR 886 (975)
Q Consensus 807 f~~LPlaa~i~~~il~vHgGi~~~~~~~~~i~~i~rp~~~~~~~~~~~dllWsdP~~~~~~~~~~~n~rg~~~~~fg~~~ 886 (975)
|++||+++++++++|||||||+|.+.++++|+.++|+.+.+..+ .++|+||+||.. ..+|.++.||.| +.||+++
T Consensus 150 ~~~LPl~~~i~~~il~vHgGl~p~~~~~~~i~~i~r~~~~~~~~-~~~dllWsdp~~---~~~~~~s~RG~g-~~fG~~~ 224 (309)
T 2ie4_C 150 FDYLPLTALVDGQIFCLHGGLSPSIDTLDHIRALDRLQEVPHEG-PMCDLLWSDPDD---RGGWGISPRGAG-YTFGQDI 224 (309)
T ss_dssp TTSSCSCEEETTTEEECSSCCCTTCCSHHHHHTSCCSSCCCSSS-HHHHHHHCEECS---SSSEEECTTSSS-EEECHHH
T ss_pred HHhCCceEEEcCcEEEECCCCCCcccCHHHHHhhcccccCChhH-HHHHHhhCCCcc---ccccccCCCCcc-cccCHHH
Confidence 99999999999999999999999999999999999998877654 889999999985 478999999999 6899999
Q ss_pred HHHHHHHcCCeEEEEeccccccceEEecCCeEEEEeccccccCCCCCcEEEEEEcCCceEEeEEecCCCCC
Q 002047 887 VMEFCNNNDLQLIVRAHECVMDGFERFAQGHLITLFSATNYCGTANNAGAILVLGRDLVVVPKLIHPLPPA 957 (975)
Q Consensus 887 ~~~fl~~~~l~~iiR~H~~~~~G~~~~~~~~~iTvfSa~~y~~~~~n~ga~l~i~~~~~~~~~~~~~~~~~ 957 (975)
+++||++||+++||||||++++||+++++++|||||||||||+..+|+||+|.+++++.+++++++|.+..
T Consensus 225 ~~~fl~~n~l~~iir~Hq~~~~G~~~~~~~~~iTvfSa~ny~~~~~N~~a~l~i~~~~~~~~~~~~~~~~~ 295 (309)
T 2ie4_C 225 SETFNHANGLTLVSRAHQLVMEGYNWCHDRNVVTIFSAPNYCYRCGNQAAIMELDDTLKYSFLQFDPAPRR 295 (309)
T ss_dssp HHHHHHHTTCSEEEECCSCCTEEEEEETTTTEEEECCCSSGGGTSCCEEEEEEECTTCCEEEEEECCCC--
T ss_pred HHHHHHHcCCeEEEecCcceeCCEEEecCCeEEEEECCcccccCCCCeEEEEEECCCCcEeEEEEeCCCCc
Confidence 99999999999999999999999999999999999999999999999999999999999999999988764
No 7
>1aui_A Calcineurin, serine/threonine phosphatase 2B; hydrolase, immunosuppression; 2.10A {Homo sapiens} SCOP: d.159.1.3
Probab=100.00 E-value=3.2e-63 Score=567.27 Aligned_cols=290 Identities=37% Similarity=0.617 Sum_probs=266.6
Q ss_pred HHHHHHHHhCCCCCCCCCccccccCHHHHHHHHHHHHHHHhcCCCeeeecCCEEEEecCCCCHHHHHHHHHHhCCCCCCC
Q 002047 648 PKKVIAHLLKPRGWKPPVRRQFFLDCNEIADLCDSAERIFSSEPSVLQLKAPIKIFGDLHGQFGDLMRLFDEYGSPSTAG 727 (975)
Q Consensus 648 ~~~~i~~l~~~~~~~~~~~~~~~l~~~~i~~l~~~~~~~~~~ep~~l~l~~~i~vvGDiHG~~~~L~~ll~~~g~~~~~~ 727 (975)
++.+|++|++.+ .|+++++.+||++|+++|++||+++++.+||+|||||||||.+|+++|+..+.++.+
T Consensus 43 ~d~l~~~~~~~~----------~l~~~~i~~L~~~a~~il~~Ep~ll~l~~pI~VIGDIHGq~~dL~~LL~~~g~p~~d- 111 (521)
T 1aui_A 43 VDILKAHLMKEG----------RLEESVALRIITEGASILRQEKNLLDIDAPVTVCGDIHGQFFDLMKLFEVGGSPANT- 111 (521)
T ss_dssp HHHHHHHHHTTC----------CBCHHHHHHHHHHHHHHHHTSCSEEEECSSEEEECCCTTCHHHHHHHHHHHCCTTTC-
T ss_pred HHHHHHHHHhCC----------CCCHHHHHHHHHHHHHHHHhCCCeEeeccceeeccCCCCCHHHHHHHHHhcCCCCcc-
Confidence 577888887653 589999999999999999999999999999999999999999999999988887655
Q ss_pred CccceeEEEeccccCCCCChHHHHHHHHHhhhcCCCCEEEEeccccccchhhhcCChHHHHHHhCCcccchhhhhhhccc
Q 002047 728 DIAYIDYLFLGDYVDRGQHSLETITLLLALKVEYPNNVHLIRGNHEAADINALFGFRIECIERMGERDGIWAWHRINRLF 807 (975)
Q Consensus 728 ~~~~~~~vfLGDyVDRG~~s~evl~ll~~lk~~~P~~v~llrGNHE~~~~~~~~gf~~e~~~~~g~~~~~~~~~~~~~~f 807 (975)
+|||||||||||++|+|||.+|++||++||++|++||||||.+.++..|||+.||..+|+. .+|+.+.++|
T Consensus 112 -----~yVFLGDyVDRGp~S~Evl~lL~aLk~~~P~~v~lLRGNHE~~~l~~~ygF~~E~~~ky~~----~l~~~~~~~f 182 (521)
T 1aui_A 112 -----RYLFLGDYVDRGYFSIECVLYLWALKILYPKTLFLLRGNHECRHLTEYFTFKQECKIKYSE----RVYDACMDAF 182 (521)
T ss_dssp -----CEEECSCCSSSSSCHHHHHHHHHHHHHHSTTTEEECCCTTSSHHHHHHSSHHHHHHHHSCH----HHHHHHHHHH
T ss_pred -----eEEEcCCcCCCCCCHHHHHHHHHHHhhhCCCeEEEecCCccHHHHHHHhCccHHHHHhhhh----HHHHHHHHHH
Confidence 8999999999999999999999999999999999999999999999999999999999963 6999999999
Q ss_pred cccceEEEEcceEEEecCCccCcccCHhhhhhccCCcccCCCCcceeccccCCCCCCCC----CCCcccC-CCCCceeee
Q 002047 808 NWLPLAALIEKKIICMHGGIGRSINHVEQIENLQRPITMEAGSIVLMDLLWSDPTENDS----VEGLRPN-ARGPGLVTF 882 (975)
Q Consensus 808 ~~LPlaa~i~~~il~vHgGi~~~~~~~~~i~~i~rp~~~~~~~~~~~dllWsdP~~~~~----~~~~~~n-~rg~~~~~f 882 (975)
++||+++++++++|||||||+|.+.++++|++|.|+.+++..+ +++|||||||..... ..+|.+| .||.| +.|
T Consensus 183 ~~LPlaaii~~~il~VHGGlsP~~~sld~I~~I~R~~e~p~~g-~~~DLLWSDP~~~~g~~~~~~~f~~ns~RG~g-~~F 260 (521)
T 1aui_A 183 DCLPLAALMNQQFLCVHGGLSPEINTLDDIRKLDRFKEPPAYG-PMCDILWSDPLEDFGNEKTQEHFTHNTVRGCS-YFY 260 (521)
T ss_dssp TTSCCEEEETTTEEEESSCCCTTCCSHHHHHHSCCSSSCCSSS-HHHHHHHCEECTTTTSCSSCCCEEECTTTTSS-EEE
T ss_pred HhCCceEEecCCceEECCCcCcccCCHHHhhhccCCcCCCccc-hhhhheecCccccccccccCcceecccCCCcc-ccc
Confidence 9999999999999999999999999999999999998877655 899999999986421 2568887 79999 789
Q ss_pred CHHHHHHHHHHcCCeEEEEeccccccceEEecCC------eEEEEeccccccCCCCCcEEEEEEcCCceEEeEEecCCCC
Q 002047 883 GPDRVMEFCNNNDLQLIVRAHECVMDGFERFAQG------HLITLFSATNYCGTANNAGAILVLGRDLVVVPKLIHPLPP 956 (975)
Q Consensus 883 g~~~~~~fl~~~~l~~iiR~H~~~~~G~~~~~~~------~~iTvfSa~~y~~~~~n~ga~l~i~~~~~~~~~~~~~~~~ 956 (975)
|++++++||++||+++||||||++++||++++++ +|||||||||||+.++|+||||.|+++ .+.++++.+.+-
T Consensus 261 G~d~v~~FL~~n~l~lIIRaHq~v~~Gy~~~~~~~~~g~~kliTVFSApNYc~~~~N~gAvl~i~~~-~~~~~~f~~~~~ 339 (521)
T 1aui_A 261 SYPAVCEFLQHNNLLSILRAHEAQDAGYRMYRKSQTTGFPSLITIFSAPNYLDVYNNKAAVLKYENN-VMNIRQFNCSPH 339 (521)
T ss_dssp CHHHHHHHHHHTTCSEEEECCSCCTTSEEECCBCTTTSSBSEEEECCCSSGGGTSCCCEEEEEEETT-EEEEEEECCCCC
T ss_pred CHHHHHHHHHHcCCcEEEEccchhccceeeecCCcCCCCCeEEEEeCCcccCCCCCceEEEEEEeCC-cceEEEecCCCC
Confidence 9999999999999999999999999999999987 599999999999999999999999998 588899988765
Q ss_pred CCCC
Q 002047 957 AISS 960 (975)
Q Consensus 957 ~~~~ 960 (975)
.+.-
T Consensus 340 p~~~ 343 (521)
T 1aui_A 340 PYWL 343 (521)
T ss_dssp CCCC
T ss_pred CCcC
Confidence 5433
No 8
>1wao_1 Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, super-helix,; 2.9A {Homo sapiens} SCOP: a.118.8.1 d.159.1.3
Probab=100.00 E-value=9.6e-57 Score=530.83 Aligned_cols=289 Identities=33% Similarity=0.599 Sum_probs=267.2
Q ss_pred hhHHHHHHHHhCCCCCCCCCccccccCHHHHHHHHHHHHHHHhcCCCeeeecCC----EEEEecCCCCHHHHHHHHHHhC
Q 002047 646 SVPKKVIAHLLKPRGWKPPVRRQFFLDCNEIADLCDSAERIFSSEPSVLQLKAP----IKIFGDLHGQFGDLMRLFDEYG 721 (975)
Q Consensus 646 ~~~~~~i~~l~~~~~~~~~~~~~~~l~~~~i~~l~~~~~~~~~~ep~~l~l~~~----i~vvGDiHG~~~~L~~ll~~~g 721 (975)
..++++++.+.+.+ .+++.++..||.++.++|.+||++++++.| ++||||||||+.+|+++|+..+
T Consensus 167 ~~l~~lie~l~~~~----------~l~e~~v~~L~~~a~eil~~e~~~~~~~~~~~~~~~vigDiHG~~~~l~~~l~~~~ 236 (477)
T 1wao_1 167 SFMKELMQWYKDQK----------KLHRKCAYQILVQVKEVLSKLSTLVETTLKETEKITVCGDTHGQFYDLLNIFELNG 236 (477)
T ss_dssp HHHHHHHHHHHTCC----------CCCHHHHHHHHHHHHHHHHTSCSEEEECCCSSCEEEEECBCTTCHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHcCC----------CCCHHHHHHHHHHHHHHHccCCCeEEeecCCCcceEEEeCCCCCHHHHHHHHHHcC
Confidence 34678888887542 478999999999999999999999999866 9999999999999999999999
Q ss_pred CCCCCCCccceeEEEeccccCCCCChHHHHHHHHHhhhcCCCCEEEEeccccccchhhhcCChHHHHHHhCCcccchhhh
Q 002047 722 SPSTAGDIAYIDYLFLGDYVDRGQHSLETITLLLALKVEYPNNVHLIRGNHEAADINALFGFRIECIERMGERDGIWAWH 801 (975)
Q Consensus 722 ~~~~~~~~~~~~~vfLGDyVDRG~~s~evl~ll~~lk~~~P~~v~llrGNHE~~~~~~~~gf~~e~~~~~g~~~~~~~~~ 801 (975)
.++..+ .|||||||||||++|+||+.+|++||+++|.+|++||||||.+.++..|||..||.++|+. .+|.
T Consensus 237 ~~~~~~-----~~v~lGD~vdrG~~s~e~~~~l~~l~~~~~~~~~~lrGNHE~~~~~~~~g~~~~~~~~~~~----~~~~ 307 (477)
T 1wao_1 237 LPSETN-----PYIFNGDFVDRGSFSVEVILTLFGFKLLYPDHFHLLRGNHETDNMNQIYGFEGEVKAKYTA----QMYE 307 (477)
T ss_dssp CCBTTB-----CEEEESCCSSSSTTHHHHHHHHHHHHHHSTTTEEEECCTTSSHHHHHHHSHHHHHHHHSCT----THHH
T ss_pred CCCCcC-----eEEEeccccCCCcchHHHHHHHHHHHhhCCCceEeecCCccHHHHhhhcChHHHHHHHhhH----HHHH
Confidence 876542 5999999999999999999999999999999999999999999999999999999999975 5999
Q ss_pred hhhccccccceEEEEcceEEEecCCc-cCcccCHhhhhhccCCcccCCCCcceeccccCCCCCCCCCCCcccCCCCCcee
Q 002047 802 RINRLFNWLPLAALIEKKIICMHGGI-GRSINHVEQIENLQRPITMEAGSIVLMDLLWSDPTENDSVEGLRPNARGPGLV 880 (975)
Q Consensus 802 ~~~~~f~~LPlaa~i~~~il~vHgGi-~~~~~~~~~i~~i~rp~~~~~~~~~~~dllWsdP~~~~~~~~~~~n~rg~~~~ 880 (975)
.+.++|++||+++++++++||||||| ++...++++|+++.|+.+++..+ +++|+|||||.. ..+|.++.||.| +
T Consensus 308 ~~~~~~~~lp~~~~~~~~~~~vHgg~~~~~~~~l~~i~~~~r~~~~~~~~-~~~dllWsdp~~---~~~~~~~~rg~~-~ 382 (477)
T 1wao_1 308 LFSEVFEWLPLAQCINGKVLIMHGGLFSEDGVTLDDIRKIERNRQPPDSG-PMCDLLWSDPQP---QNGRSISKRGVS-C 382 (477)
T ss_dssp HHHHHHTTSCSEEEETTTEEECSSCCCSSSCCCHHHHHTCCCSSCCCSSS-HHHHHHHCEECS---SSSCEECTTSSS-E
T ss_pred HHHHHhccCCcEEEEcCcEEEECCCCCccccCCHHHHHhccCCCCCchhh-hhhhhccCCCCc---cCCcCcCCCCCc-e
Confidence 99999999999999999999999999 77888999999999998876554 899999999985 468999999999 6
Q ss_pred eeCHHHHHHHHHHcCCeEEEEeccccccceEEecCCeEEEEeccccccCCCCCcEEEEEE-cCCceEEeEEecCCCCCC
Q 002047 881 TFGPDRVMEFCNNNDLQLIVRAHECVMDGFERFAQGHLITLFSATNYCGTANNAGAILVL-GRDLVVVPKLIHPLPPAI 958 (975)
Q Consensus 881 ~fg~~~~~~fl~~~~l~~iiR~H~~~~~G~~~~~~~~~iTvfSa~~y~~~~~n~ga~l~i-~~~~~~~~~~~~~~~~~~ 958 (975)
.||++++++||++||+++||||||++++||+++++|+|||||||||||+..+|.||+|.| ++++.+.++++.+.+...
T Consensus 383 ~fg~~~~~~fl~~~~~~~iir~H~~~~~g~~~~~~~~~~tvfsa~~y~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~ 461 (477)
T 1wao_1 383 QFGPDVTKAFLEENNLDYIIRSHEVKAEGYEVAHGGRCVTVFSAPNYCDQMGNKASYIHLQGSDLRPQFHQFTAVPHPN 461 (477)
T ss_dssp EECHHHHHHHHHHTTCCEEEECCSCCTEEEEEEGGGTEEEEBCCTTTTSSSCCEEEEEEEETTEEEEEEEEECCCCCCS
T ss_pred eECHHHHHHHHHHcCCeEEEECCCCCcCCeEEecCCeEEEEeCCcccccCCCccEEEEEEECCCCeEEEEEEeCCCCCC
Confidence 899999999999999999999999999999999999999999999999999999999999 789999999999877554
No 9
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=100.00 E-value=1.1e-38 Score=354.32 Aligned_cols=280 Identities=19% Similarity=0.315 Sum_probs=230.5
Q ss_pred ecCCCCCCCCcCceEEEEcccCCCCCCCccCCEEEEEcCCCCCCCCCCCCCCCCCCCCcccccccccCcEEEEECCCCcE
Q 002047 83 EKKEDGPGPRCGHTLTAVAAVGEEGTPGYIGPRLILFGGATALEGNSAASGTPSSAGSAGIRLAGATADVHCYDVLTNKW 162 (975)
Q Consensus 83 ~~~~~~P~pR~ght~t~~~~~~~~~~~~~~~~~lyvfGG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dv~~yD~~t~~W 162 (975)
...+..|.+|.+|+++.+ +++||+|||.. .. .++++++||+.+++|
T Consensus 6 ~~~~~~~~~~~~~~~~~~------------~~~i~v~GG~~-~~---------------------~~~~~~~~d~~~~~W 51 (308)
T 1zgk_A 6 HHHHSSGLVPRGSHAPKV------------GRLIYTAGGYF-RQ---------------------SLSYLEAYNPSNGTW 51 (308)
T ss_dssp ---------------CCC------------CCCEEEECCBS-SS---------------------BCCCEEEEETTTTEE
T ss_pred cccccCCeeeCCccccCC------------CCEEEEEeCcC-CC---------------------CcceEEEEcCCCCeE
Confidence 345677899999999998 78999999972 11 678999999999999
Q ss_pred EEecCCCCCCCCccceEEEEeCCEEEEEeccC---CCCCccccEEEEEcCCCCCcEEEEEecCCCCCCCcccEEEEeCCc
Q 002047 163 SRITPFGEPPTPRAAHVATAVGTMVVIQGGIG---PAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGPRYGHVMALVGQR 239 (975)
Q Consensus 163 ~~l~~~g~~P~pR~~hsa~~~~~~iyv~GG~~---~~~~~~~dv~~yD~~t~~~~W~~v~~~g~~P~~R~~h~~~~~~~~ 239 (975)
+.+..+ |.+|.+|++++++++||++||.. ......+++++||+.+++ |+.++ ++|.+|.+|+++++++
T Consensus 52 ~~~~~~---p~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~~d~~~~~--W~~~~---~~p~~r~~~~~~~~~~- 122 (308)
T 1zgk_A 52 LRLADL---QVPRSGLAGCVVGGLLYAVGGRNNSPDGNTDSSALDCYNPMTNQ--WSPCA---PMSVPRNRIGVGVIDG- 122 (308)
T ss_dssp EECCCC---SSCCBSCEEEEETTEEEEECCEEEETTEEEECCCEEEEETTTTE--EEECC---CCSSCCBTCEEEEETT-
T ss_pred eECCCC---CcccccceEEEECCEEEEECCCcCCCCCCeecceEEEECCCCCe--EeECC---CCCcCccccEEEEECC-
Confidence 999765 89999999999999999999984 334457899999999975 99997 8999999999999987
Q ss_pred EEEEEcCCCCCCCCCcEEEEECCCCCcEEEEccCCCCCCCCcceeEEEEEeCCeEEEecCCCCCCCCccceEEeecCCCC
Q 002047 240 YLMAIGGNDGKRPLADVWALDTAAKPYEWRKLEPEGEGPPPCMYATASARSDGLLLLCGGRDASSVPLASAYGLAKHRDG 319 (975)
Q Consensus 240 ~lyV~GG~~g~~~~ndv~~yDl~s~~~~W~~v~~~~~~P~~r~~~~a~~~~~g~lyvfGG~~~~~~~l~d~~~~~~~~~~ 319 (975)
+|||+||.++...++++++||+.++ +|+.+.++ |.+|..|++++ .+++||++||.+... .+++++.|+..++
T Consensus 123 ~iyv~GG~~~~~~~~~~~~yd~~~~--~W~~~~~~---p~~r~~~~~~~-~~~~iyv~GG~~~~~-~~~~~~~yd~~~~- 194 (308)
T 1zgk_A 123 HIYAVGGSHGCIHHNSVERYEPERD--EWHLVAPM---LTRRIGVGVAV-LNRLLYAVGGFDGTN-RLNSAECYYPERN- 194 (308)
T ss_dssp EEEEECCEETTEECCCEEEEETTTT--EEEECCCC---SSCCBSCEEEE-ETTEEEEECCBCSSC-BCCCEEEEETTTT-
T ss_pred EEEEEcCCCCCcccccEEEECCCCC--eEeECCCC---CccccceEEEE-ECCEEEEEeCCCCCC-cCceEEEEeCCCC-
Confidence 8999999988778999999999999 99999865 34456555554 599999999998765 4899999998877
Q ss_pred eEEEEECCCCCCCCcceeeEEEeCCEEEEEcCcCCCCCccccCCcEEEEECCCCeEEEcccCcCCCCCCCCccccCCCCC
Q 002047 320 RWEWAIAPGVSPSPRYQHAAVFVNARLHVSGGALGGGRMVEDSSSVAVLDTAAGVWCDTKSVVTSPRTGRYSADAAGGDA 399 (975)
Q Consensus 320 ~W~w~~~~g~~P~~R~~hs~v~~~~~L~V~GG~~~~~~~~~~~~dv~~yD~~t~~W~~v~~~~~~p~~~~~~~~~~~~~~ 399 (975)
+|..+..+ |.+|..|++++++++|||+||.+... ..+++++||+++++|+.+..+
T Consensus 195 --~W~~~~~~-p~~r~~~~~~~~~~~iyv~GG~~~~~----~~~~v~~yd~~~~~W~~~~~~------------------ 249 (308)
T 1zgk_A 195 --EWRMITAM-NTIRSGAGVCVLHNCIYAAGGYDGQD----QLNSVERYDVETETWTFVAPM------------------ 249 (308)
T ss_dssp --EEEECCCC-SSCCBSCEEEEETTEEEEECCBCSSS----BCCCEEEEETTTTEEEECCCC------------------
T ss_pred --eEeeCCCC-CCccccceEEEECCEEEEEeCCCCCC----ccceEEEEeCCCCcEEECCCC------------------
Confidence 77777654 78999999999999999999987543 378999999999999999876
Q ss_pred ccCCCccceeEEEEECCEEEEEcCCCCCCCccceEeeecccc
Q 002047 400 AVELTRRCRHAAAAVGDLIFIYGGLRGGVLLDDLLVAEDLAA 441 (975)
Q Consensus 400 ~~~p~~R~~hsa~~~~~~LyV~GG~~~~~~l~Dv~~ld~~~~ 441 (975)
|.+|..|++++++++|||+||+++...++|++++|....
T Consensus 250 ---p~~r~~~~~~~~~~~i~v~GG~~~~~~~~~v~~yd~~~~ 288 (308)
T 1zgk_A 250 ---KHRRSALGITVHQGRIYVLGGYDGHTFLDSVECYDPDTD 288 (308)
T ss_dssp ---SSCCBSCEEEEETTEEEEECCBCSSCBCCEEEEEETTTT
T ss_pred ---CCCccceEEEEECCEEEEEcCcCCCcccceEEEEcCCCC
Confidence 568999999999999999999998888999999997653
No 10
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=100.00 E-value=1.9e-37 Score=351.02 Aligned_cols=281 Identities=18% Similarity=0.206 Sum_probs=225.0
Q ss_pred CCCCCCCCcCceEEEEcccCCCCCCCccCCEEEEEcCCCCCCCCCCCCCCCCCCCCcccccccccCcEEEEECC--CCcE
Q 002047 85 KEDGPGPRCGHTLTAVAAVGEEGTPGYIGPRLILFGGATALEGNSAASGTPSSAGSAGIRLAGATADVHCYDVL--TNKW 162 (975)
Q Consensus 85 ~~~~P~pR~ght~t~~~~~~~~~~~~~~~~~lyvfGG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dv~~yD~~--t~~W 162 (975)
...+|.||.+|+++++ +++||||||.. .+++++||+. +++|
T Consensus 3 l~~lP~~r~~~~~~~~------------~~~iyv~GG~~-------------------------~~~~~~~d~~~~~~~W 45 (357)
T 2uvk_A 3 LPETPVPFKSGTGAID------------NDTVYIGLGSA-------------------------GTAWYKLDTQAKDKKW 45 (357)
T ss_dssp SCCCSSCCCSCEEEEE------------TTEEEEECGGG-------------------------TTCEEEEETTSSSCCE
T ss_pred CCCCCccccceEEEEE------------CCEEEEEeCcC-------------------------CCeEEEEccccCCCCe
Confidence 4678999999999998 79999999963 2489999998 4999
Q ss_pred EEecCCCCCC-CCccceEEEEeCCEEEEEeccC----CCCCccccEEEEEcCCCCCcEEEEEecCCCC-CCCcccEEEEe
Q 002047 163 SRITPFGEPP-TPRAAHVATAVGTMVVIQGGIG----PAGLSAEDLHVLDLTQQRPRWHRVVVQGPGP-GPRYGHVMALV 236 (975)
Q Consensus 163 ~~l~~~g~~P-~pR~~hsa~~~~~~iyv~GG~~----~~~~~~~dv~~yD~~t~~~~W~~v~~~g~~P-~~R~~h~~~~~ 236 (975)
+.++++ | .+|.+|++++++++|||+||.+ .....++++|+||+.+++ |+.++ +++ .+|++|+++++
T Consensus 46 ~~~~~~---p~~~R~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~v~~yd~~~~~--W~~~~---~~~p~~r~~~~~~~~ 117 (357)
T 2uvk_A 46 TALAAF---PGGPRDQATSAFIDGNLYVFGGIGKNSEGLTQVFNDVHKYNPKTNS--WVKLM---SHAPMGMAGHVTFVH 117 (357)
T ss_dssp EECCCC---TTCCCBSCEEEEETTEEEEECCEEECTTSCEEECCCEEEEETTTTE--EEECS---CCCSSCCSSEEEEEE
T ss_pred eECCCC---CCCcCccceEEEECCEEEEEcCCCCCCCccceeeccEEEEeCCCCc--EEECC---CCCCcccccceEEEE
Confidence 999887 6 8999999999999999999982 233457999999999985 99998 555 99999999998
Q ss_pred CCcEEEEEcCCCCC----------------------------------CCCCcEEEEECCCCCcEEEEccCCCCCCCCcc
Q 002047 237 GQRYLMAIGGNDGK----------------------------------RPLADVWALDTAAKPYEWRKLEPEGEGPPPCM 282 (975)
Q Consensus 237 ~~~~lyV~GG~~g~----------------------------------~~~ndv~~yDl~s~~~~W~~v~~~~~~P~~r~ 282 (975)
++ +|||+||.++. ..++++++||+.++ +|+.+.+++ .+++
T Consensus 118 ~~-~iyv~GG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~yd~~~~--~W~~~~~~p---~~~~ 191 (357)
T 2uvk_A 118 NG-KAYVTGGVNQNIFNGYFEDLNEAGKDSTAIDKINAHYFDKKAEDYFFNKFLLSFDPSTQ--QWSYAGESP---WYGT 191 (357)
T ss_dssp TT-EEEEEECCCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHSSCGGGGCCCCEEEEEETTTT--EEEEEEECS---SCCC
T ss_pred CC-EEEEEeCcCCCcCcccccchhhcCCcccchhhhhhhhccccccccCCcccEEEEeCCCC--cEEECCCCC---CCCc
Confidence 87 89999998753 25789999999999 999997653 3466
Q ss_pred eeEEEEEeCCeEEEecCCCCCCCCccceEEeec--CCCCeEEEEECCCCC-CCCcceeeEEEeCCEEEEEcCcCCCCC--
Q 002047 283 YATASARSDGLLLLCGGRDASSVPLASAYGLAK--HRDGRWEWAIAPGVS-PSPRYQHAAVFVNARLHVSGGALGGGR-- 357 (975)
Q Consensus 283 ~~~a~~~~~g~lyvfGG~~~~~~~l~d~~~~~~--~~~~~W~w~~~~g~~-P~~R~~hs~v~~~~~L~V~GG~~~~~~-- 357 (975)
.++++++.+++||||||.+......++++.|+. .++ +|..+..++ |..|.+|++++++++|||+||.+....
T Consensus 192 ~~~~~~~~~~~iyv~GG~~~~~~~~~~v~~~d~d~~~~---~W~~~~~~~~~~~~~~~~~~~~~~~iyv~GG~~~~~~~~ 268 (357)
T 2uvk_A 192 AGAAVVNKGDKTWLINGEAKPGLRTDAVFELDFTGNNL---KWNKLAPVSSPDGVAGGFAGISNDSLIFAGGAGFKGSRE 268 (357)
T ss_dssp BSCEEEEETTEEEEECCEEETTEECCCEEEEECC---C---EEEECCCSSTTTCCBSCEEEEETTEEEEECCEECTTHHH
T ss_pred ccccEEEECCEEEEEeeecCCCcccCceEEEEecCCCC---cEEecCCCCCCcccccceEEEECCEEEEEcCccccCCcc
Confidence 656667779999999998766656788988865 444 566666542 445778899999999999999754311
Q ss_pred -----------ccccCCcEEEEECCCCeEEEcccCcCCCCCCCCccccCCCCCccCCCccceeEEEEECCEEEEEcCCCC
Q 002047 358 -----------MVEDSSSVAVLDTAAGVWCDTKSVVTSPRTGRYSADAAGGDAAVELTRRCRHAAAAVGDLIFIYGGLRG 426 (975)
Q Consensus 358 -----------~~~~~~dv~~yD~~t~~W~~v~~~~~~p~~~~~~~~~~~~~~~~~p~~R~~hsa~~~~~~LyV~GG~~~ 426 (975)
......++++||+++++|+++..+ |.+|+.|++++++++||||||++.
T Consensus 269 ~~~~g~~~~~~~~~~~~~~~~yd~~~~~W~~~~~~---------------------p~~r~~~~~~~~~~~i~v~GG~~~ 327 (357)
T 2uvk_A 269 NYQNGKNYAHEGLKKSYSTDIHLWHNGKWDKSGEL---------------------SQGRAYGVSLPWNNSLLIIGGETA 327 (357)
T ss_dssp HHHTTCSSTTTTCCCEECCEEEECC---CEEEEEC---------------------SSCCBSSEEEEETTEEEEEEEECG
T ss_pred cccccceeccccccceeeEEEEecCCCceeeCCCC---------------------CCCcccceeEEeCCEEEEEeeeCC
Confidence 011246799999999999999877 568999999999999999999876
Q ss_pred C-CCccceEeeeccc
Q 002047 427 G-VLLDDLLVAEDLA 440 (975)
Q Consensus 427 ~-~~l~Dv~~ld~~~ 440 (975)
. ..++|+|.+++..
T Consensus 328 ~~~~~~~v~~l~~~~ 342 (357)
T 2uvk_A 328 GGKAVTDSVLITVKD 342 (357)
T ss_dssp GGCEEEEEEEEEC-C
T ss_pred CCCEeeeEEEEEEcC
Confidence 4 5689999888764
No 11
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=100.00 E-value=1.4e-36 Score=335.95 Aligned_cols=262 Identities=23% Similarity=0.366 Sum_probs=225.8
Q ss_pred CCEEEEEcCCCCCCCCCCCCCCCCCCCCcccccccccCcEEEEECCCCcEEEecCCCCCCCCccceEEEEeCCEEEEEec
Q 002047 113 GPRLILFGGATALEGNSAASGTPSSAGSAGIRLAGATADVHCYDVLTNKWSRITPFGEPPTPRAAHVATAVGTMVVIQGG 192 (975)
Q Consensus 113 ~~~lyvfGG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dv~~yD~~t~~W~~l~~~g~~P~pR~~hsa~~~~~~iyv~GG 192 (975)
+++||+|||.... ..+++++||+.+++|..+..+ |.+|.+|++++++++||++||
T Consensus 15 ~~~i~v~GG~~~~----------------------~~~~~~~~d~~~~~W~~~~~~---p~~r~~~~~~~~~~~lyv~GG 69 (302)
T 2xn4_A 15 PKLMVVVGGQAPK----------------------AIRSVECYDFKEERWHQVAEL---PSRRCRAGMVYMAGLVFAVGG 69 (302)
T ss_dssp CEEEEEECCBSSS----------------------BCCCEEEEETTTTEEEEECCC---SSCCBSCEEEEETTEEEEESC
T ss_pred CCEEEEECCCCCC----------------------CCCcEEEEcCcCCcEeEcccC---CcccccceEEEECCEEEEEeC
Confidence 5789999997531 567999999999999999765 889999999999999999999
Q ss_pred cCCCCCccccEEEEEcCCCCCcEEEEEecCCCCCCCcccEEEEeCCcEEEEEcCCCCCCCCCcEEEEECCCCCcEEEEcc
Q 002047 193 IGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGPRYGHVMALVGQRYLMAIGGNDGKRPLADVWALDTAAKPYEWRKLE 272 (975)
Q Consensus 193 ~~~~~~~~~dv~~yD~~t~~~~W~~v~~~g~~P~~R~~h~~~~~~~~~lyV~GG~~g~~~~ndv~~yDl~s~~~~W~~v~ 272 (975)
.... ...+++++||+.+++ |+.++ ++|.+|++|+++++++ +|||+||.++...++++|+||+.++ +|+.+.
T Consensus 70 ~~~~-~~~~~~~~~d~~~~~--W~~~~---~~p~~r~~~~~~~~~~-~iyv~GG~~~~~~~~~~~~~d~~~~--~W~~~~ 140 (302)
T 2xn4_A 70 FNGS-LRVRTVDSYDPVKDQ--WTSVA---NMRDRRSTLGAAVLNG-LLYAVGGFDGSTGLSSVEAYNIKSN--EWFHVA 140 (302)
T ss_dssp BCSS-SBCCCEEEEETTTTE--EEEEC---CCSSCCBSCEEEEETT-EEEEEEEECSSCEEEEEEEEETTTT--EEEEEC
T ss_pred cCCC-ccccceEEECCCCCc--eeeCC---CCCccccceEEEEECC-EEEEEcCCCCCccCceEEEEeCCCC--eEeecC
Confidence 8643 457899999999975 99998 8999999999999988 8999999988888999999999999 999998
Q ss_pred CCCCCCCCcceeEEEEEeCCeEEEecCCCCCC-CCccceEEeecCCCCeEEEEECCCCCCCCcceeeEEEeCCEEEEEcC
Q 002047 273 PEGEGPPPCMYATASARSDGLLLLCGGRDASS-VPLASAYGLAKHRDGRWEWAIAPGVSPSPRYQHAAVFVNARLHVSGG 351 (975)
Q Consensus 273 ~~~~~P~~r~~~~a~~~~~g~lyvfGG~~~~~-~~l~d~~~~~~~~~~~W~w~~~~g~~P~~R~~hs~v~~~~~L~V~GG 351 (975)
+++ .+|..|++ +..+++||++||.+... ..+++++.|+..++ +|..+..+ |.+|..|++++++++|||+||
T Consensus 141 ~~p---~~r~~~~~-~~~~~~iyv~GG~~~~~~~~~~~~~~yd~~~~---~W~~~~~~-p~~r~~~~~~~~~~~iyv~GG 212 (302)
T 2xn4_A 141 PMN---TRRSSVGV-GVVGGLLYAVGGYDVASRQCLSTVECYNATTN---EWTYIAEM-STRRSGAGVGVLNNLLYAVGG 212 (302)
T ss_dssp CCS---SCCBSCEE-EEETTEEEEECCEETTTTEECCCEEEEETTTT---EEEEECCC-SSCCBSCEEEEETTEEEEECC
T ss_pred CCC---CcccCceE-EEECCEEEEEeCCCCCCCccccEEEEEeCCCC---cEEECCCC-ccccccccEEEECCEEEEECC
Confidence 764 34555544 55699999999987654 35789999998877 66666554 789999999999999999999
Q ss_pred cCCCCCccccCCcEEEEECCCCeEEEcccCcCCCCCCCCccccCCCCCccCCCccceeEEEEECCEEEEEcCCCCCCCcc
Q 002047 352 ALGGGRMVEDSSSVAVLDTAAGVWCDTKSVVTSPRTGRYSADAAGGDAAVELTRRCRHAAAAVGDLIFIYGGLRGGVLLD 431 (975)
Q Consensus 352 ~~~~~~~~~~~~dv~~yD~~t~~W~~v~~~~~~p~~~~~~~~~~~~~~~~~p~~R~~hsa~~~~~~LyV~GG~~~~~~l~ 431 (975)
.++.. ..+++++||+++++|+.+..+ |.+|..|+++.++++|||+||.++...++
T Consensus 213 ~~~~~----~~~~~~~yd~~~~~W~~~~~~---------------------~~~r~~~~~~~~~~~i~v~GG~~~~~~~~ 267 (302)
T 2xn4_A 213 HDGPL----VRKSVEVYDPTTNAWRQVADM---------------------NMCRRNAGVCAVNGLLYVVGGDDGSCNLA 267 (302)
T ss_dssp BSSSS----BCCCEEEEETTTTEEEEECCC---------------------SSCCBSCEEEEETTEEEEECCBCSSSBCC
T ss_pred CCCCc----ccceEEEEeCCCCCEeeCCCC---------------------CCccccCeEEEECCEEEEECCcCCCcccc
Confidence 87643 368899999999999999876 56899999999999999999998888899
Q ss_pred ceEeeecccc
Q 002047 432 DLLVAEDLAA 441 (975)
Q Consensus 432 Dv~~ld~~~~ 441 (975)
+++++|....
T Consensus 268 ~v~~yd~~~~ 277 (302)
T 2xn4_A 268 SVEYYNPTTD 277 (302)
T ss_dssp CEEEEETTTT
T ss_pred cEEEEcCCCC
Confidence 9999997653
No 12
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=100.00 E-value=2.2e-36 Score=334.90 Aligned_cols=259 Identities=19% Similarity=0.297 Sum_probs=225.4
Q ss_pred CCEEEEEcCCCCCCCCCCCCCCCCCCCCcccccccccCcEEEEECCCCcEEEecCCCCCCCCccceEEEEeCCEEEEEec
Q 002047 113 GPRLILFGGATALEGNSAASGTPSSAGSAGIRLAGATADVHCYDVLTNKWSRITPFGEPPTPRAAHVATAVGTMVVIQGG 192 (975)
Q Consensus 113 ~~~lyvfGG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dv~~yD~~t~~W~~l~~~g~~P~pR~~hsa~~~~~~iyv~GG 192 (975)
.+.||+|||.. ..+++++||+.+++|+.+..+ |.+|.+|++++++++||++||
T Consensus 11 ~~~l~~~GG~~------------------------~~~~~~~~d~~~~~W~~~~~~---p~~r~~~~~~~~~~~lyv~GG 63 (306)
T 3ii7_A 11 HDYRIALFGGS------------------------QPQSCRYFNPKDYSWTDIRCP---FEKRRDAACVFWDNVVYILGG 63 (306)
T ss_dssp CCEEEEEECCS------------------------STTSEEEEETTTTEEEECCCC---SCCCBSCEEEEETTEEEEECC
T ss_pred cceEEEEeCCC------------------------CCceEEEecCCCCCEecCCCC---CcccceeEEEEECCEEEEEeC
Confidence 46899999964 256999999999999999876 889999999999999999999
Q ss_pred cCCCCCccccEEEEEcCCCCCcEEEEEecCCCCCCCcccEEEEeCCcEEEEEcCCC-CCCCCCcEEEEECCCCCcEEEEc
Q 002047 193 IGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGPRYGHVMALVGQRYLMAIGGND-GKRPLADVWALDTAAKPYEWRKL 271 (975)
Q Consensus 193 ~~~~~~~~~dv~~yD~~t~~~~W~~v~~~g~~P~~R~~h~~~~~~~~~lyV~GG~~-g~~~~ndv~~yDl~s~~~~W~~v 271 (975)
.. ....+++++||+.+++ |+.++ ++|.+|++|+++++++ +|||+||.+ +...++++|+||+.++ +|+.+
T Consensus 64 ~~--~~~~~~~~~~d~~~~~--W~~~~---~~p~~r~~~~~~~~~~-~iyv~GG~~~~~~~~~~~~~~d~~~~--~W~~~ 133 (306)
T 3ii7_A 64 SQ--LFPIKRMDCYNVVKDS--WYSKL---GPPTPRDSLAACAAEG-KIYTSGGSEVGNSALYLFECYDTRTE--SWHTK 133 (306)
T ss_dssp BS--SSBCCEEEEEETTTTE--EEEEE---CCSSCCBSCEEEEETT-EEEEECCBBTTBSCCCCEEEEETTTT--EEEEE
T ss_pred CC--CCCcceEEEEeCCCCe--EEECC---CCCccccceeEEEECC-EEEEECCCCCCCcEeeeEEEEeCCCC--ceEeC
Confidence 86 5568999999999985 99998 8999999999999987 899999997 6677999999999999 99999
Q ss_pred cCCCCCCCCcceeEEEEEeCCeEEEecCCCCCCCC---ccceEEeecCCCCeEEEEECCCCCCCCcceeeEEEeCCEEEE
Q 002047 272 EPEGEGPPPCMYATASARSDGLLLLCGGRDASSVP---LASAYGLAKHRDGRWEWAIAPGVSPSPRYQHAAVFVNARLHV 348 (975)
Q Consensus 272 ~~~~~~P~~r~~~~a~~~~~g~lyvfGG~~~~~~~---l~d~~~~~~~~~~~W~w~~~~g~~P~~R~~hs~v~~~~~L~V 348 (975)
.+++ .+|..|++ +..+++||++||.+..... +++++.|++.++ +|..++.+ |.+|..|++++++++|||
T Consensus 134 ~~~p---~~r~~~~~-~~~~~~iyv~GG~~~~~~~~~~~~~~~~yd~~~~---~W~~~~~~-p~~r~~~~~~~~~~~i~v 205 (306)
T 3ii7_A 134 PSML---TQRCSHGM-VEANGLIYVCGGSLGNNVSGRVLNSCEVYDPATE---TWTELCPM-IEARKNHGLVFVKDKIFA 205 (306)
T ss_dssp CCCS---SCCBSCEE-EEETTEEEEECCEESCTTTCEECCCEEEEETTTT---EEEEECCC-SSCCBSCEEEEETTEEEE
T ss_pred CCCc---CCcceeEE-EEECCEEEEECCCCCCCCcccccceEEEeCCCCC---eEEECCCc-cchhhcceEEEECCEEEE
Confidence 7754 34555555 4569999999998766533 899999998877 66677654 789999999999999999
Q ss_pred EcCcCCCCCccccCCcEEEEECCCCeEEEcccCcCCCCCCCCccccCCCCCccCCCccceeEEEEECCEEEEEcCCCCCC
Q 002047 349 SGGALGGGRMVEDSSSVAVLDTAAGVWCDTKSVVTSPRTGRYSADAAGGDAAVELTRRCRHAAAAVGDLIFIYGGLRGGV 428 (975)
Q Consensus 349 ~GG~~~~~~~~~~~~dv~~yD~~t~~W~~v~~~~~~p~~~~~~~~~~~~~~~~~p~~R~~hsa~~~~~~LyV~GG~~~~~ 428 (975)
+||.+... ..+++++||+++++|+.+..+ |.+|..|++++++++|||+||+++..
T Consensus 206 ~GG~~~~~----~~~~~~~yd~~~~~W~~~~~~---------------------p~~r~~~~~~~~~~~i~v~GG~~~~~ 260 (306)
T 3ii7_A 206 VGGQNGLG----GLDNVEYYDIKLNEWKMVSPM---------------------PWKGVTVKCAAVGSIVYVLAGFQGVG 260 (306)
T ss_dssp ECCEETTE----EBCCEEEEETTTTEEEECCCC---------------------SCCBSCCEEEEETTEEEEEECBCSSS
T ss_pred EeCCCCCC----CCceEEEeeCCCCcEEECCCC---------------------CCCccceeEEEECCEEEEEeCcCCCe
Confidence 99987653 378899999999999999876 56899999999999999999999888
Q ss_pred CccceEeeecccc
Q 002047 429 LLDDLLVAEDLAA 441 (975)
Q Consensus 429 ~l~Dv~~ld~~~~ 441 (975)
.++++|++|....
T Consensus 261 ~~~~~~~yd~~~~ 273 (306)
T 3ii7_A 261 RLGHILEYNTETD 273 (306)
T ss_dssp BCCEEEEEETTTT
T ss_pred eeeeEEEEcCCCC
Confidence 9999999997653
No 13
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=100.00 E-value=4.4e-36 Score=331.42 Aligned_cols=264 Identities=21% Similarity=0.321 Sum_probs=226.1
Q ss_pred CCEEEEEcCCCCCCCCCCCCCCCCCCCCcccccccccCcEEEEECCCCcEEEecCCCCCCCCccceEEEEeCCEEEEEec
Q 002047 113 GPRLILFGGATALEGNSAASGTPSSAGSAGIRLAGATADVHCYDVLTNKWSRITPFGEPPTPRAAHVATAVGTMVVIQGG 192 (975)
Q Consensus 113 ~~~lyvfGG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dv~~yD~~t~~W~~l~~~g~~P~pR~~hsa~~~~~~iyv~GG 192 (975)
+++||+|||...... ..+++++||+.+++|..++.+ |.+|.+|++++++++||++||
T Consensus 14 ~~~i~~~GG~~~~~~--------------------~~~~~~~~d~~~~~W~~~~~~---p~~r~~~~~~~~~~~l~v~GG 70 (301)
T 2vpj_A 14 NEVLLVVGGFGSQQS--------------------PIDVVEKYDPKTQEWSFLPSI---TRKRRYVASVSLHDRIYVIGG 70 (301)
T ss_dssp CEEEEEECCEETTTE--------------------ECCCEEEEETTTTEEEECCCC---SSCCBSCEEEEETTEEEEECC
T ss_pred CCEEEEEeCccCCCc--------------------ceeEEEEEcCCCCeEEeCCCC---ChhhccccEEEECCEEEEEcC
Confidence 679999999432211 788999999999999999865 789999999999999999999
Q ss_pred cCCCCCccccEEEEEcCCCC-CcEEEEEecCCCCCCCcccEEEEeCCcEEEEEcCCCCCCCCCcEEEEECCCCCcEEEEc
Q 002047 193 IGPAGLSAEDLHVLDLTQQR-PRWHRVVVQGPGPGPRYGHVMALVGQRYLMAIGGNDGKRPLADVWALDTAAKPYEWRKL 271 (975)
Q Consensus 193 ~~~~~~~~~dv~~yD~~t~~-~~W~~v~~~g~~P~~R~~h~~~~~~~~~lyV~GG~~g~~~~ndv~~yDl~s~~~~W~~v 271 (975)
.. .....+++++||+.+++ .+|+.++ ++|.+|.+|+++++++ +|||+||.++...++++|+||+.++ +|+.+
T Consensus 71 ~~-~~~~~~~~~~~d~~~~~~~~W~~~~---~~p~~r~~~~~~~~~~-~lyv~GG~~~~~~~~~~~~~d~~~~--~W~~~ 143 (301)
T 2vpj_A 71 YD-GRSRLSSVECLDYTADEDGVWYSVA---PMNVRRGLAGATTLGD-MIYVSGGFDGSRRHTSMERYDPNID--QWSML 143 (301)
T ss_dssp BC-SSCBCCCEEEEETTCCTTCCCEEEC---CCSSCCBSCEEEEETT-EEEEECCBCSSCBCCEEEEEETTTT--EEEEE
T ss_pred CC-CCccCceEEEEECCCCCCCeeEECC---CCCCCccceeEEEECC-EEEEEcccCCCcccceEEEEcCCCC--eEEEC
Confidence 86 34567899999998862 1299996 8999999999999987 8999999998888999999999999 99999
Q ss_pred cCCCCCCCCcceeEEEEEeCCeEEEecCCCCCCCCccceEEeecCCCCeEEEEECCCCCCCCcceeeEEEeCCEEEEEcC
Q 002047 272 EPEGEGPPPCMYATASARSDGLLLLCGGRDASSVPLASAYGLAKHRDGRWEWAIAPGVSPSPRYQHAAVFVNARLHVSGG 351 (975)
Q Consensus 272 ~~~~~~P~~r~~~~a~~~~~g~lyvfGG~~~~~~~l~d~~~~~~~~~~~W~w~~~~g~~P~~R~~hs~v~~~~~L~V~GG 351 (975)
.+++ .+|..|++ ++.+++||++||.+... .+++++.|++.++ +|..+..+ |.+|..|+++.++++|||+||
T Consensus 144 ~~~p---~~r~~~~~-~~~~~~iyv~GG~~~~~-~~~~~~~~d~~~~---~W~~~~~~-p~~r~~~~~~~~~~~i~v~GG 214 (301)
T 2vpj_A 144 GDMQ---TAREGAGL-VVASGVIYCLGGYDGLN-ILNSVEKYDPHTG---HWTNVTPM-ATKRSGAGVALLNDHIYVVGG 214 (301)
T ss_dssp EECS---SCCBSCEE-EEETTEEEEECCBCSSC-BCCCEEEEETTTT---EEEEECCC-SSCCBSCEEEEETTEEEEECC
T ss_pred CCCC---CCcccceE-EEECCEEEEECCCCCCc-ccceEEEEeCCCC---cEEeCCCC-CcccccceEEEECCEEEEEeC
Confidence 8764 34555555 45599999999987765 6899999998877 66666544 789999999999999999999
Q ss_pred cCCCCCccccCCcEEEEECCCCeEEEcccCcCCCCCCCCccccCCCCCccCCCccceeEEEEECCEEEEEcCCCCCCCcc
Q 002047 352 ALGGGRMVEDSSSVAVLDTAAGVWCDTKSVVTSPRTGRYSADAAGGDAAVELTRRCRHAAAAVGDLIFIYGGLRGGVLLD 431 (975)
Q Consensus 352 ~~~~~~~~~~~~dv~~yD~~t~~W~~v~~~~~~p~~~~~~~~~~~~~~~~~p~~R~~hsa~~~~~~LyV~GG~~~~~~l~ 431 (975)
.+... ..+++++||+++++|+.+..+ |.+|..|++++++++|||+||+++...++
T Consensus 215 ~~~~~----~~~~v~~yd~~~~~W~~~~~~---------------------p~~r~~~~~~~~~~~i~v~GG~~~~~~~~ 269 (301)
T 2vpj_A 215 FDGTA----HLSSVEAYNIRTDSWTTVTSM---------------------TTPRCYVGATVLRGRLYAIAGYDGNSLLS 269 (301)
T ss_dssp BCSSS----BCCCEEEEETTTTEEEEECCC---------------------SSCCBSCEEEEETTEEEEECCBCSSSBEE
T ss_pred CCCCc----ccceEEEEeCCCCcEEECCCC---------------------CCcccceeEEEECCEEEEEcCcCCCcccc
Confidence 87653 278899999999999999876 56899999999999999999998888889
Q ss_pred ceEeeeccc
Q 002047 432 DLLVAEDLA 440 (975)
Q Consensus 432 Dv~~ld~~~ 440 (975)
+++++|...
T Consensus 270 ~v~~yd~~~ 278 (301)
T 2vpj_A 270 SIECYDPII 278 (301)
T ss_dssp EEEEEETTT
T ss_pred cEEEEcCCC
Confidence 999999764
No 14
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=100.00 E-value=1.4e-35 Score=327.74 Aligned_cols=260 Identities=19% Similarity=0.298 Sum_probs=219.9
Q ss_pred eEeecCCCCCCCCcCceEEEEcccCCCCCCCccCCEEEEEcCCCCCCCCCCCCCCCCCCCCcccccccccCcEEEEECCC
Q 002047 80 AVIEKKEDGPGPRCGHTLTAVAAVGEEGTPGYIGPRLILFGGATALEGNSAASGTPSSAGSAGIRLAGATADVHCYDVLT 159 (975)
Q Consensus 80 ~~~~~~~~~P~pR~ght~t~~~~~~~~~~~~~~~~~lyvfGG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dv~~yD~~t 159 (975)
..|......|.+|++|+++++ +++||||||..... .++++++||+.+
T Consensus 40 ~~W~~~~~~p~~r~~~~~~~~------------~~~lyv~GG~~~~~---------------------~~~~~~~~d~~~ 86 (302)
T 2xn4_A 40 ERWHQVAELPSRRCRAGMVYM------------AGLVFAVGGFNGSL---------------------RVRTVDSYDPVK 86 (302)
T ss_dssp TEEEEECCCSSCCBSCEEEEE------------TTEEEEESCBCSSS---------------------BCCCEEEEETTT
T ss_pred CcEeEcccCCcccccceEEEE------------CCEEEEEeCcCCCc---------------------cccceEEECCCC
Confidence 345556789999999999998 78999999986432 678999999999
Q ss_pred CcEEEecCCCCCCCCccceEEEEeCCEEEEEeccCCCCCccccEEEEEcCCCCCcEEEEEecCCCCCCCcccEEEEeCCc
Q 002047 160 NKWSRITPFGEPPTPRAAHVATAVGTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGPRYGHVMALVGQR 239 (975)
Q Consensus 160 ~~W~~l~~~g~~P~pR~~hsa~~~~~~iyv~GG~~~~~~~~~dv~~yD~~t~~~~W~~v~~~g~~P~~R~~h~~~~~~~~ 239 (975)
++|+.++++ |.+|..|++++++++||++||... ....+++++||+.+++ |+.++ ++|.+|++|+++++++
T Consensus 87 ~~W~~~~~~---p~~r~~~~~~~~~~~iyv~GG~~~-~~~~~~~~~~d~~~~~--W~~~~---~~p~~r~~~~~~~~~~- 156 (302)
T 2xn4_A 87 DQWTSVANM---RDRRSTLGAAVLNGLLYAVGGFDG-STGLSSVEAYNIKSNE--WFHVA---PMNTRRSSVGVGVVGG- 156 (302)
T ss_dssp TEEEEECCC---SSCCBSCEEEEETTEEEEEEEECS-SCEEEEEEEEETTTTE--EEEEC---CCSSCCBSCEEEEETT-
T ss_pred CceeeCCCC---CccccceEEEEECCEEEEEcCCCC-CccCceEEEEeCCCCe--EeecC---CCCCcccCceEEEECC-
Confidence 999999876 899999999999999999999864 3457899999999875 99997 8999999999999988
Q ss_pred EEEEEcCCCCCC--CCCcEEEEECCCCCcEEEEccCCCCCCCCcceeEEEEEeCCeEEEecCCCCCCCCccceEEeecCC
Q 002047 240 YLMAIGGNDGKR--PLADVWALDTAAKPYEWRKLEPEGEGPPPCMYATASARSDGLLLLCGGRDASSVPLASAYGLAKHR 317 (975)
Q Consensus 240 ~lyV~GG~~g~~--~~ndv~~yDl~s~~~~W~~v~~~~~~P~~r~~~~a~~~~~g~lyvfGG~~~~~~~l~d~~~~~~~~ 317 (975)
+|||+||.++.. .++++++||+.++ +|+.+.+++ .+|..| ++++.+++||++||.++.. .+++++.|+..+
T Consensus 157 ~iyv~GG~~~~~~~~~~~~~~yd~~~~--~W~~~~~~p---~~r~~~-~~~~~~~~iyv~GG~~~~~-~~~~~~~yd~~~ 229 (302)
T 2xn4_A 157 LLYAVGGYDVASRQCLSTVECYNATTN--EWTYIAEMS---TRRSGA-GVGVLNNLLYAVGGHDGPL-VRKSVEVYDPTT 229 (302)
T ss_dssp EEEEECCEETTTTEECCCEEEEETTTT--EEEEECCCS---SCCBSC-EEEEETTEEEEECCBSSSS-BCCCEEEEETTT
T ss_pred EEEEEeCCCCCCCccccEEEEEeCCCC--cEEECCCCc---cccccc-cEEEECCEEEEECCCCCCc-ccceEEEEeCCC
Confidence 899999997653 5899999999999 999997653 445555 4455699999999987654 578999999887
Q ss_pred CCeEEEEECCCCCCCCcceeeEEEeCCEEEEEcCcCCCCCccccCCcEEEEECCCCeEEEcc-cCcCCCCCCCCccccCC
Q 002047 318 DGRWEWAIAPGVSPSPRYQHAAVFVNARLHVSGGALGGGRMVEDSSSVAVLDTAAGVWCDTK-SVVTSPRTGRYSADAAG 396 (975)
Q Consensus 318 ~~~W~w~~~~g~~P~~R~~hs~v~~~~~L~V~GG~~~~~~~~~~~~dv~~yD~~t~~W~~v~-~~~~~p~~~~~~~~~~~ 396 (975)
+ +|..+..+ |.+|..|+++.++++|||+||.++.. ..+++++||+++++|+.+. .+
T Consensus 230 ~---~W~~~~~~-~~~r~~~~~~~~~~~i~v~GG~~~~~----~~~~v~~yd~~~~~W~~~~~~~--------------- 286 (302)
T 2xn4_A 230 N---AWRQVADM-NMCRRNAGVCAVNGLLYVVGGDDGSC----NLASVEYYNPTTDKWTVVSSCM--------------- 286 (302)
T ss_dssp T---EEEEECCC-SSCCBSCEEEEETTEEEEECCBCSSS----BCCCEEEEETTTTEEEECSSCC---------------
T ss_pred C---CEeeCCCC-CCccccCeEEEECCEEEEECCcCCCc----ccccEEEEcCCCCeEEECCccc---------------
Confidence 7 66666654 68999999999999999999987643 3788999999999999986 45
Q ss_pred CCCccCCCccceeEEEEECCEE
Q 002047 397 GDAAVELTRRCRHAAAAVGDLI 418 (975)
Q Consensus 397 ~~~~~~p~~R~~hsa~~~~~~L 418 (975)
+.+|+.|++++++++|
T Consensus 287 ------~~~r~~~~~~~~~~~i 302 (302)
T 2xn4_A 287 ------STGRSYAGVTVIDKRL 302 (302)
T ss_dssp ------SSCCBSCEEEEEEC--
T ss_pred ------CcccccceEEEecccC
Confidence 5689999999998875
No 15
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=100.00 E-value=1.7e-35 Score=327.80 Aligned_cols=260 Identities=18% Similarity=0.228 Sum_probs=223.9
Q ss_pred eeeEeecCCCCCCCCcCceEEEEcccCCCCCCCccCCEEEEEcCCCCCCCCCCCCCCCCCCCCcccccccccCcEEEEEC
Q 002047 78 VNAVIEKKEDGPGPRCGHTLTAVAAVGEEGTPGYIGPRLILFGGATALEGNSAASGTPSSAGSAGIRLAGATADVHCYDV 157 (975)
Q Consensus 78 ~~~~~~~~~~~P~pR~ght~t~~~~~~~~~~~~~~~~~lyvfGG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dv~~yD~ 157 (975)
....|......|.||.+|+++++ +++||||||.. .. .++++++||+
T Consensus 32 ~~~~W~~~~~~p~~r~~~~~~~~------------~~~lyv~GG~~-~~---------------------~~~~~~~~d~ 77 (306)
T 3ii7_A 32 KDYSWTDIRCPFEKRRDAACVFW------------DNVVYILGGSQ-LF---------------------PIKRMDCYNV 77 (306)
T ss_dssp TTTEEEECCCCSCCCBSCEEEEE------------TTEEEEECCBS-SS---------------------BCCEEEEEET
T ss_pred CCCCEecCCCCCcccceeEEEEE------------CCEEEEEeCCC-CC---------------------CcceEEEEeC
Confidence 33456677889999999999998 78999999986 21 7889999999
Q ss_pred CCCcEEEecCCCCCCCCccceEEEEeCCEEEEEeccCCCCCccccEEEEEcCCCCCcEEEEEecCCCCCCCcccEEEEeC
Q 002047 158 LTNKWSRITPFGEPPTPRAAHVATAVGTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGPRYGHVMALVG 237 (975)
Q Consensus 158 ~t~~W~~l~~~g~~P~pR~~hsa~~~~~~iyv~GG~~~~~~~~~dv~~yD~~t~~~~W~~v~~~g~~P~~R~~h~~~~~~ 237 (975)
.+++|+.+.++ |.+|.+|++++++++|||+||........+++++||+.+++ |+.++ ++|.+|++|+++.++
T Consensus 78 ~~~~W~~~~~~---p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~d~~~~~--W~~~~---~~p~~r~~~~~~~~~ 149 (306)
T 3ii7_A 78 VKDSWYSKLGP---PTPRDSLAACAAEGKIYTSGGSEVGNSALYLFECYDTRTES--WHTKP---SMLTQRCSHGMVEAN 149 (306)
T ss_dssp TTTEEEEEECC---SSCCBSCEEEEETTEEEEECCBBTTBSCCCCEEEEETTTTE--EEEEC---CCSSCCBSCEEEEET
T ss_pred CCCeEEECCCC---CccccceeEEEECCEEEEECCCCCCCcEeeeEEEEeCCCCc--eEeCC---CCcCCcceeEEEEEC
Confidence 99999999876 89999999999999999999987566678999999999975 99986 899999999999998
Q ss_pred CcEEEEEcCCCCCCC----CCcEEEEECCCCCcEEEEccCCCCCCCCcceeEEEEEeCCeEEEecCCCCCCCCccceEEe
Q 002047 238 QRYLMAIGGNDGKRP----LADVWALDTAAKPYEWRKLEPEGEGPPPCMYATASARSDGLLLLCGGRDASSVPLASAYGL 313 (975)
Q Consensus 238 ~~~lyV~GG~~g~~~----~ndv~~yDl~s~~~~W~~v~~~~~~P~~r~~~~a~~~~~g~lyvfGG~~~~~~~l~d~~~~ 313 (975)
+ +|||+||.++... ++++++||+.++ +|+.+.+++ .+|..|++ ++.+++||++||.+... .+++++.|
T Consensus 150 ~-~iyv~GG~~~~~~~~~~~~~~~~yd~~~~--~W~~~~~~p---~~r~~~~~-~~~~~~i~v~GG~~~~~-~~~~~~~y 221 (306)
T 3ii7_A 150 G-LIYVCGGSLGNNVSGRVLNSCEVYDPATE--TWTELCPMI---EARKNHGL-VFVKDKIFAVGGQNGLG-GLDNVEYY 221 (306)
T ss_dssp T-EEEEECCEESCTTTCEECCCEEEEETTTT--EEEEECCCS---SCCBSCEE-EEETTEEEEECCEETTE-EBCCEEEE
T ss_pred C-EEEEECCCCCCCCcccccceEEEeCCCCC--eEEECCCcc---chhhcceE-EEECCEEEEEeCCCCCC-CCceEEEe
Confidence 8 8999999977655 899999999999 999998654 34555555 44599999999987664 67899999
Q ss_pred ecCCCCeEEEEECCCCCCCCcceeeEEEeCCEEEEEcCcCCCCCccccCCcEEEEECCCCeEEEcccCcCCCCCCCCccc
Q 002047 314 AKHRDGRWEWAIAPGVSPSPRYQHAAVFVNARLHVSGGALGGGRMVEDSSSVAVLDTAAGVWCDTKSVVTSPRTGRYSAD 393 (975)
Q Consensus 314 ~~~~~~~W~w~~~~g~~P~~R~~hs~v~~~~~L~V~GG~~~~~~~~~~~~dv~~yD~~t~~W~~v~~~~~~p~~~~~~~~ 393 (975)
++.++ +|..+..+ |.+|..|++++++++|||+||.++.. ..+++++||+++++|+.+..+
T Consensus 222 d~~~~---~W~~~~~~-p~~r~~~~~~~~~~~i~v~GG~~~~~----~~~~~~~yd~~~~~W~~~~~~------------ 281 (306)
T 3ii7_A 222 DIKLN---EWKMVSPM-PWKGVTVKCAAVGSIVYVLAGFQGVG----RLGHILEYNTETDKWVANSKV------------ 281 (306)
T ss_dssp ETTTT---EEEECCCC-SCCBSCCEEEEETTEEEEEECBCSSS----BCCEEEEEETTTTEEEEEEEE------------
T ss_pred eCCCC---cEEECCCC-CCCccceeEEEECCEEEEEeCcCCCe----eeeeEEEEcCCCCeEEeCCCc------------
Confidence 99887 77777655 78999999999999999999987654 378999999999999999887
Q ss_pred cCCCCCccCCCccceeEEEEECC
Q 002047 394 AAGGDAAVELTRRCRHAAAAVGD 416 (975)
Q Consensus 394 ~~~~~~~~~p~~R~~hsa~~~~~ 416 (975)
|.+|.+|+++++.+
T Consensus 282 ---------~~~r~~~~~~~~~~ 295 (306)
T 3ii7_A 282 ---------RAFPVTSCLICVVD 295 (306)
T ss_dssp ---------ECCSCTTCEEEEEE
T ss_pred ---------ccccceeEEEEECC
Confidence 56899999888754
No 16
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=100.00 E-value=3.8e-35 Score=325.77 Aligned_cols=260 Identities=22% Similarity=0.327 Sum_probs=220.7
Q ss_pred eEeecCCCCCCCCcCceEEEEcccCCCCCCCccCCEEEEEcCCCCCCCCCCCCCCCCCCCCcccccccccCcEEEEECCC
Q 002047 80 AVIEKKEDGPGPRCGHTLTAVAAVGEEGTPGYIGPRLILFGGATALEGNSAASGTPSSAGSAGIRLAGATADVHCYDVLT 159 (975)
Q Consensus 80 ~~~~~~~~~P~pR~ght~t~~~~~~~~~~~~~~~~~lyvfGG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dv~~yD~~t 159 (975)
..|......|.||.+|+++++ +++||||||...... ....++++++||+.+
T Consensus 49 ~~W~~~~~~p~~r~~~~~~~~------------~~~lyv~GG~~~~~~-----------------~~~~~~~~~~~d~~~ 99 (308)
T 1zgk_A 49 GTWLRLADLQVPRSGLAGCVV------------GGLLYAVGGRNNSPD-----------------GNTDSSALDCYNPMT 99 (308)
T ss_dssp TEEEECCCCSSCCBSCEEEEE------------TTEEEEECCEEEETT-----------------EEEECCCEEEEETTT
T ss_pred CeEeECCCCCcccccceEEEE------------CCEEEEECCCcCCCC-----------------CCeecceEEEECCCC
Confidence 445666889999999999998 789999999731100 001678999999999
Q ss_pred CcEEEecCCCCCCCCccceEEEEeCCEEEEEeccCCCCCccccEEEEEcCCCCCcEEEEEecCCCCCCCcccEEEEeCCc
Q 002047 160 NKWSRITPFGEPPTPRAAHVATAVGTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGPRYGHVMALVGQR 239 (975)
Q Consensus 160 ~~W~~l~~~g~~P~pR~~hsa~~~~~~iyv~GG~~~~~~~~~dv~~yD~~t~~~~W~~v~~~g~~P~~R~~h~~~~~~~~ 239 (975)
++|+.++++ |.+|..|++++++++||++||.... ...+++++||+.+++ |+.++ ++|.+|++|+++++++
T Consensus 100 ~~W~~~~~~---p~~r~~~~~~~~~~~iyv~GG~~~~-~~~~~~~~yd~~~~~--W~~~~---~~p~~r~~~~~~~~~~- 169 (308)
T 1zgk_A 100 NQWSPCAPM---SVPRNRIGVGVIDGHIYAVGGSHGC-IHHNSVERYEPERDE--WHLVA---PMLTRRIGVGVAVLNR- 169 (308)
T ss_dssp TEEEECCCC---SSCCBTCEEEEETTEEEEECCEETT-EECCCEEEEETTTTE--EEECC---CCSSCCBSCEEEEETT-
T ss_pred CeEeECCCC---CcCccccEEEEECCEEEEEcCCCCC-cccccEEEECCCCCe--EeECC---CCCccccceEEEEECC-
Confidence 999999876 8899999999999999999997543 357899999999975 99987 8999999999999987
Q ss_pred EEEEEcCCCCCCCCCcEEEEECCCCCcEEEEccCCCCCCCCcceeEEEEEeCCeEEEecCCCCCCCCccceEEeecCCCC
Q 002047 240 YLMAIGGNDGKRPLADVWALDTAAKPYEWRKLEPEGEGPPPCMYATASARSDGLLLLCGGRDASSVPLASAYGLAKHRDG 319 (975)
Q Consensus 240 ~lyV~GG~~g~~~~ndv~~yDl~s~~~~W~~v~~~~~~P~~r~~~~a~~~~~g~lyvfGG~~~~~~~l~d~~~~~~~~~~ 319 (975)
+|||+||.++...++++++||+.++ +|+.+.+++ .+|..|+++ +.+++|||+||.+... .+++++.|++.++
T Consensus 170 ~iyv~GG~~~~~~~~~~~~yd~~~~--~W~~~~~~p---~~r~~~~~~-~~~~~iyv~GG~~~~~-~~~~v~~yd~~~~- 241 (308)
T 1zgk_A 170 LLYAVGGFDGTNRLNSAECYYPERN--EWRMITAMN---TIRSGAGVC-VLHNCIYAAGGYDGQD-QLNSVERYDVETE- 241 (308)
T ss_dssp EEEEECCBCSSCBCCCEEEEETTTT--EEEECCCCS---SCCBSCEEE-EETTEEEEECCBCSSS-BCCCEEEEETTTT-
T ss_pred EEEEEeCCCCCCcCceEEEEeCCCC--eEeeCCCCC---CccccceEE-EECCEEEEEeCCCCCC-ccceEEEEeCCCC-
Confidence 8999999988777999999999999 999997653 446656554 5599999999998654 5899999999877
Q ss_pred eEEEEECCCCCCCCcceeeEEEeCCEEEEEcCcCCCCCccccCCcEEEEECCCCeEEEcccCcCCCCCCCCccccCCCCC
Q 002047 320 RWEWAIAPGVSPSPRYQHAAVFVNARLHVSGGALGGGRMVEDSSSVAVLDTAAGVWCDTKSVVTSPRTGRYSADAAGGDA 399 (975)
Q Consensus 320 ~W~w~~~~g~~P~~R~~hs~v~~~~~L~V~GG~~~~~~~~~~~~dv~~yD~~t~~W~~v~~~~~~p~~~~~~~~~~~~~~ 399 (975)
+|..+..+ |.+|..|++++++++|||+||.++.. ..+++++||+++++|+.+..+
T Consensus 242 --~W~~~~~~-p~~r~~~~~~~~~~~i~v~GG~~~~~----~~~~v~~yd~~~~~W~~~~~~------------------ 296 (308)
T 1zgk_A 242 --TWTFVAPM-KHRRSALGITVHQGRIYVLGGYDGHT----FLDSVECYDPDTDTWSEVTRM------------------ 296 (308)
T ss_dssp --EEEECCCC-SSCCBSCEEEEETTEEEEECCBCSSC----BCCEEEEEETTTTEEEEEEEC------------------
T ss_pred --cEEECCCC-CCCccceEEEEECCEEEEEcCcCCCc----ccceEEEEcCCCCEEeecCCC------------------
Confidence 77777754 78999999999999999999987643 378999999999999999887
Q ss_pred ccCCCccceeEEEEE
Q 002047 400 AVELTRRCRHAAAAV 414 (975)
Q Consensus 400 ~~~p~~R~~hsa~~~ 414 (975)
|.+|+.|+++++
T Consensus 297 ---p~~r~~~~~~~l 308 (308)
T 1zgk_A 297 ---TSGRSGVGVAVT 308 (308)
T ss_dssp ---SSCCBSCEEEEC
T ss_pred ---CCCcccceeEeC
Confidence 669999999874
No 17
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=100.00 E-value=1.3e-34 Score=319.72 Aligned_cols=257 Identities=21% Similarity=0.324 Sum_probs=220.4
Q ss_pred eEeecCCCCCCCCcCceEEEEcccCCCCCCCccCCEEEEEcCCCCCCCCCCCCCCCCCCCCcccccccccCcEEEEECCC
Q 002047 80 AVIEKKEDGPGPRCGHTLTAVAAVGEEGTPGYIGPRLILFGGATALEGNSAASGTPSSAGSAGIRLAGATADVHCYDVLT 159 (975)
Q Consensus 80 ~~~~~~~~~P~pR~ght~t~~~~~~~~~~~~~~~~~lyvfGG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dv~~yD~~t 159 (975)
..|......|.+|.+|+++++ +++||||||..... ..+++++||+.+
T Consensus 41 ~~W~~~~~~p~~r~~~~~~~~------------~~~l~v~GG~~~~~---------------------~~~~~~~~d~~~ 87 (301)
T 2vpj_A 41 QEWSFLPSITRKRRYVASVSL------------HDRIYVIGGYDGRS---------------------RLSSVECLDYTA 87 (301)
T ss_dssp TEEEECCCCSSCCBSCEEEEE------------TTEEEEECCBCSSC---------------------BCCCEEEEETTC
T ss_pred CeEEeCCCCChhhccccEEEE------------CCEEEEEcCCCCCc---------------------cCceEEEEECCC
Confidence 345566688999999999998 78999999986322 778999999999
Q ss_pred Cc---EEEecCCCCCCCCccceEEEEeCCEEEEEeccCCCCCccccEEEEEcCCCCCcEEEEEecCCCCCCCcccEEEEe
Q 002047 160 NK---WSRITPFGEPPTPRAAHVATAVGTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGPRYGHVMALV 236 (975)
Q Consensus 160 ~~---W~~l~~~g~~P~pR~~hsa~~~~~~iyv~GG~~~~~~~~~dv~~yD~~t~~~~W~~v~~~g~~P~~R~~h~~~~~ 236 (975)
++ |+.+.++ |.+|..|++++++++||++||.... ...+++++||+.+++ |+.++ ++|.+|.+|+++++
T Consensus 88 ~~~~~W~~~~~~---p~~r~~~~~~~~~~~lyv~GG~~~~-~~~~~~~~~d~~~~~--W~~~~---~~p~~r~~~~~~~~ 158 (301)
T 2vpj_A 88 DEDGVWYSVAPM---NVRRGLAGATTLGDMIYVSGGFDGS-RRHTSMERYDPNIDQ--WSMLG---DMQTAREGAGLVVA 158 (301)
T ss_dssp CTTCCCEEECCC---SSCCBSCEEEEETTEEEEECCBCSS-CBCCEEEEEETTTTE--EEEEE---ECSSCCBSCEEEEE
T ss_pred CCCCeeEECCCC---CCCccceeEEEECCEEEEEcccCCC-cccceEEEEcCCCCe--EEECC---CCCCCcccceEEEE
Confidence 99 9999776 8899999999999999999998643 347899999999875 99998 78999999999999
Q ss_pred CCcEEEEEcCCCCCCCCCcEEEEECCCCCcEEEEccCCCCCCCCcceeEEEEEeCCeEEEecCCCCCCCCccceEEeecC
Q 002047 237 GQRYLMAIGGNDGKRPLADVWALDTAAKPYEWRKLEPEGEGPPPCMYATASARSDGLLLLCGGRDASSVPLASAYGLAKH 316 (975)
Q Consensus 237 ~~~~lyV~GG~~g~~~~ndv~~yDl~s~~~~W~~v~~~~~~P~~r~~~~a~~~~~g~lyvfGG~~~~~~~l~d~~~~~~~ 316 (975)
++ +||++||.++...++++++||+.++ +|+.+.++ |.+|..|++ +..+++||++||.+... .+++++.|+..
T Consensus 159 ~~-~iyv~GG~~~~~~~~~~~~~d~~~~--~W~~~~~~---p~~r~~~~~-~~~~~~i~v~GG~~~~~-~~~~v~~yd~~ 230 (301)
T 2vpj_A 159 SG-VIYCLGGYDGLNILNSVEKYDPHTG--HWTNVTPM---ATKRSGAGV-ALLNDHIYVVGGFDGTA-HLSSVEAYNIR 230 (301)
T ss_dssp TT-EEEEECCBCSSCBCCCEEEEETTTT--EEEEECCC---SSCCBSCEE-EEETTEEEEECCBCSSS-BCCCEEEEETT
T ss_pred CC-EEEEECCCCCCcccceEEEEeCCCC--cEEeCCCC---CcccccceE-EEECCEEEEEeCCCCCc-ccceEEEEeCC
Confidence 87 8999999988888999999999999 99999765 344555554 55599999999998665 58899999888
Q ss_pred CCCeEEEEECCCCCCCCcceeeEEEeCCEEEEEcCcCCCCCccccCCcEEEEECCCCeEEEcccCcCCCCCCCCccccCC
Q 002047 317 RDGRWEWAIAPGVSPSPRYQHAAVFVNARLHVSGGALGGGRMVEDSSSVAVLDTAAGVWCDTKSVVTSPRTGRYSADAAG 396 (975)
Q Consensus 317 ~~~~W~w~~~~g~~P~~R~~hs~v~~~~~L~V~GG~~~~~~~~~~~~dv~~yD~~t~~W~~v~~~~~~p~~~~~~~~~~~ 396 (975)
++ +|..+..+ |.+|..|++++++++|||+||.+... ..+++++||+++++|+.+..+
T Consensus 231 ~~---~W~~~~~~-p~~r~~~~~~~~~~~i~v~GG~~~~~----~~~~v~~yd~~~~~W~~~~~~--------------- 287 (301)
T 2vpj_A 231 TD---SWTTVTSM-TTPRCYVGATVLRGRLYAIAGYDGNS----LLSSIECYDPIIDSWEVVTSM--------------- 287 (301)
T ss_dssp TT---EEEEECCC-SSCCBSCEEEEETTEEEEECCBCSSS----BEEEEEEEETTTTEEEEEEEE---------------
T ss_pred CC---cEEECCCC-CCcccceeEEEECCEEEEEcCcCCCc----ccccEEEEcCCCCeEEEcCCC---------------
Confidence 77 66666654 78999999999999999999987643 367899999999999999887
Q ss_pred CCCccCCCccceeEEEEEC
Q 002047 397 GDAAVELTRRCRHAAAAVG 415 (975)
Q Consensus 397 ~~~~~~p~~R~~hsa~~~~ 415 (975)
|.+|+.|+++++.
T Consensus 288 ------~~~r~~~~~~~~~ 300 (301)
T 2vpj_A 288 ------GTQRCDAGVCVLR 300 (301)
T ss_dssp ------EEEEESCEEEEEE
T ss_pred ------CcccccceEEEeC
Confidence 5699999999874
No 18
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=100.00 E-value=1.5e-35 Score=329.90 Aligned_cols=267 Identities=18% Similarity=0.254 Sum_probs=220.3
Q ss_pred CCCCCCcCceEEEEcccCCCCCCCccCCEEEEEcCCCCCCCCCCCCCCCCCCCCcccccccccCcEEEEECCCCcEEEec
Q 002047 87 DGPGPRCGHTLTAVAAVGEEGTPGYIGPRLILFGGATALEGNSAASGTPSSAGSAGIRLAGATADVHCYDVLTNKWSRIT 166 (975)
Q Consensus 87 ~~P~pR~ght~t~~~~~~~~~~~~~~~~~lyvfGG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dv~~yD~~t~~W~~l~ 166 (975)
+.|.||.+|+++++ +++||||||........ .....+++++||+.+++|+.++
T Consensus 31 ~~p~~r~~~~~~~~------------~~~iyv~GG~~~~~~~~---------------~~~~~~~~~~~d~~~~~W~~~~ 83 (315)
T 4asc_A 31 SSQVPKNHVSLVTK------------ENQVFVAGGLFYNEDNK---------------EDPMSAYFLQFDHLDSEWLGMP 83 (315)
T ss_dssp CCCSCSSEEEEECT------------TCCEEEEEEEEECSSCS---------------SSCEEEEEEEEETTTTEEEECC
T ss_pred CCCCCccceEEEEE------------CCEEEEEcCcccCCCCC---------------ccccccceEEecCCCCeEEECC
Confidence 34779999999987 78999999963211100 0015678999999999999998
Q ss_pred CCCCCCCCccceEEEEeCCEEEEEeccC--CCCCccccEEEEEcCCCCCcEEEEEecCCCCCCCcccEEEEeCCcEEEEE
Q 002047 167 PFGEPPTPRAAHVATAVGTMVVIQGGIG--PAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGPRYGHVMALVGQRYLMAI 244 (975)
Q Consensus 167 ~~g~~P~pR~~hsa~~~~~~iyv~GG~~--~~~~~~~dv~~yD~~t~~~~W~~v~~~g~~P~~R~~h~~~~~~~~~lyV~ 244 (975)
++ |.+|.+|++++++++||++||.. ......+++++||+.+++ |+.++ ++|.+|++|+++++++ +|||+
T Consensus 84 ~~---p~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~d~~~~~--W~~~~---~~p~~r~~~~~~~~~~-~iyv~ 154 (315)
T 4asc_A 84 PL---PSPRCLFGLGEALNSIYVVGGREIKDGERCLDSVMCYDRLSFK--WGESD---PLPYVVYGHTVLSHMD-LVYVI 154 (315)
T ss_dssp CB---SSCEESCEEEEETTEEEEECCEESSTTCCBCCCEEEEETTTTE--EEECC---CCSSCCBSCEEEEETT-EEEEE
T ss_pred CC---CcchhceeEEEECCEEEEEeCCcCCCCCcccceEEEECCCCCc--EeECC---CCCCcccceeEEEECC-EEEEE
Confidence 76 89999999999999999999975 345678999999999975 99987 8999999999999998 89999
Q ss_pred cCC-CCCCCCCcEEEEECCCCCcEEEEccCCCCCCCCcceeEEEEEeCCeEEEecCCCCCCCCccceEEeecCCCCeEEE
Q 002047 245 GGN-DGKRPLADVWALDTAAKPYEWRKLEPEGEGPPPCMYATASARSDGLLLLCGGRDASSVPLASAYGLAKHRDGRWEW 323 (975)
Q Consensus 245 GG~-~g~~~~ndv~~yDl~s~~~~W~~v~~~~~~P~~r~~~~a~~~~~g~lyvfGG~~~~~~~l~d~~~~~~~~~~~W~w 323 (975)
||. ++...++++|+||+.++ +|+.+.+++ .+|..|+++ +.+++|||+||.+... .+++++.|++.++ +|
T Consensus 155 GG~~~~~~~~~~~~~yd~~~~--~W~~~~~~p---~~r~~~~~~-~~~~~iyv~GG~~~~~-~~~~~~~yd~~~~---~W 224 (315)
T 4asc_A 155 GGKGSDRKCLNKMCVYDPKKF--EWKELAPMQ---TARSLFGAT-VHDGRIIVAAGVTDTG-LTSSAEVYSITDN---KW 224 (315)
T ss_dssp CCBCTTSCBCCCEEEEETTTT--EEEECCCCS---SCCBSCEEE-EETTEEEEEEEECSSS-EEEEEEEEETTTT---EE
T ss_pred eCCCCCCcccceEEEEeCCCC--eEEECCCCC---CchhceEEE-EECCEEEEEeccCCCC-ccceEEEEECCCC---eE
Confidence 999 56677999999999999 999998763 445555554 5599999999987765 6889999998877 66
Q ss_pred EECCCCCCCCcceeeEEEeCCEEEEEcCcCCC----CC-ccccCCcEEEEECCCCeEEEcccCcCCCCCCCCccccCCCC
Q 002047 324 AIAPGVSPSPRYQHAAVFVNARLHVSGGALGG----GR-MVEDSSSVAVLDTAAGVWCDTKSVVTSPRTGRYSADAAGGD 398 (975)
Q Consensus 324 ~~~~g~~P~~R~~hs~v~~~~~L~V~GG~~~~----~~-~~~~~~dv~~yD~~t~~W~~v~~~~~~p~~~~~~~~~~~~~ 398 (975)
..+..+ |.+|..|++++++++|||+||.+.. +. .....+++|+||+++++|+.+.
T Consensus 225 ~~~~~~-p~~r~~~~~~~~~~~l~v~GG~~~~~~~~~~~~~~~~~~v~~yd~~~~~W~~~~------------------- 284 (315)
T 4asc_A 225 APFEAF-PQERSSLSLVSLVGTLYAIGGFATLETESGELVPTELNDIWRYNEEEKKWEGVL------------------- 284 (315)
T ss_dssp EEECCC-SSCCBSCEEEEETTEEEEEEEEEEEECTTSCEEEEEEEEEEEEETTTTEEEEEE-------------------
T ss_pred EECCCC-CCcccceeEEEECCEEEEECCccccCcCCccccccccCcEEEecCCCChhhhhc-------------------
Confidence 666654 7999999999999999999998532 11 0124688999999999999983
Q ss_pred CccCCCccceeEEEEECCEEEEEcC
Q 002047 399 AAVELTRRCRHAAAAVGDLIFIYGG 423 (975)
Q Consensus 399 ~~~~p~~R~~hsa~~~~~~LyV~GG 423 (975)
+.+|..|++++++++|||+..
T Consensus 285 ----~~~r~~~~~~~~~~~l~v~~~ 305 (315)
T 4asc_A 285 ----REIAYAAGATFLPVRLNVLRL 305 (315)
T ss_dssp ----SCSSCCSSCEEEEEEECGGGS
T ss_pred ----cCCcCccceEEeCCEEEEEEe
Confidence 338999999999999999876
No 19
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=100.00 E-value=1.1e-34 Score=323.13 Aligned_cols=248 Identities=18% Similarity=0.264 Sum_probs=209.4
Q ss_pred cEEEEECCCCcEEEecCCCCCCCCccceEEEEeCCEEEEEeccC-----CCCCccccEEEEEcCCCCCcEEEEEecCCCC
Q 002047 151 DVHCYDVLTNKWSRITPFGEPPTPRAAHVATAVGTMVVIQGGIG-----PAGLSAEDLHVLDLTQQRPRWHRVVVQGPGP 225 (975)
Q Consensus 151 dv~~yD~~t~~W~~l~~~g~~P~pR~~hsa~~~~~~iyv~GG~~-----~~~~~~~dv~~yD~~t~~~~W~~v~~~g~~P 225 (975)
++++||+.+++|.. ..+ ..|.+|.+|++++++++||++||.. ......+++++||+.+++ |+.++ ++|
T Consensus 14 ~~~~yd~~~~~W~~-~~~-~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~--W~~~~---~~p 86 (315)
T 4asc_A 14 GAVAYDPAANECYC-ASL-SSQVPKNHVSLVTKENQVFVAGGLFYNEDNKEDPMSAYFLQFDHLDSE--WLGMP---PLP 86 (315)
T ss_dssp EEEEEETTTTEEEE-EEC-CCCSCSSEEEEECTTCCEEEEEEEEECSSCSSSCEEEEEEEEETTTTE--EEECC---CBS
T ss_pred ceEEECCCCCeEec-CCC-CCCCCccceEEEEECCEEEEEcCcccCCCCCccccccceEEecCCCCe--EEECC---CCC
Confidence 78999999999997 333 1367999999999999999999962 233445779999999975 99987 899
Q ss_pred CCCcccEEEEeCCcEEEEEcCCC---CCCCCCcEEEEECCCCCcEEEEccCCCCCCCCcceeEEEEEeCCeEEEecCCCC
Q 002047 226 GPRYGHVMALVGQRYLMAIGGND---GKRPLADVWALDTAAKPYEWRKLEPEGEGPPPCMYATASARSDGLLLLCGGRDA 302 (975)
Q Consensus 226 ~~R~~h~~~~~~~~~lyV~GG~~---g~~~~ndv~~yDl~s~~~~W~~v~~~~~~P~~r~~~~a~~~~~g~lyvfGG~~~ 302 (975)
.+|++|+++++++ +|||+||.+ +...++++|+||+.++ +|+.+.+++ .+|..|++ +..+++||++||.+.
T Consensus 87 ~~r~~~~~~~~~~-~lyv~GG~~~~~~~~~~~~~~~~d~~~~--~W~~~~~~p---~~r~~~~~-~~~~~~iyv~GG~~~ 159 (315)
T 4asc_A 87 SPRCLFGLGEALN-SIYVVGGREIKDGERCLDSVMCYDRLSF--KWGESDPLP---YVVYGHTV-LSHMDLVYVIGGKGS 159 (315)
T ss_dssp SCEESCEEEEETT-EEEEECCEESSTTCCBCCCEEEEETTTT--EEEECCCCS---SCCBSCEE-EEETTEEEEECCBCT
T ss_pred cchhceeEEEECC-EEEEEeCCcCCCCCcccceEEEECCCCC--cEeECCCCC---CcccceeE-EEECCEEEEEeCCCC
Confidence 9999999999988 899999974 4677999999999999 999998753 34555555 457999999999966
Q ss_pred CCCCccceEEeecCCCCeEEEEECCCCCCCCcceeeEEEeCCEEEEEcCcCCCCCccccCCcEEEEECCCCeEEEcccCc
Q 002047 303 SSVPLASAYGLAKHRDGRWEWAIAPGVSPSPRYQHAAVFVNARLHVSGGALGGGRMVEDSSSVAVLDTAAGVWCDTKSVV 382 (975)
Q Consensus 303 ~~~~l~d~~~~~~~~~~~W~w~~~~g~~P~~R~~hs~v~~~~~L~V~GG~~~~~~~~~~~~dv~~yD~~t~~W~~v~~~~ 382 (975)
....+++++.|++.++ +|..++.+ |.+|..|++++++++|||+||.+... ..+++++||+++++|+.+..+
T Consensus 160 ~~~~~~~~~~yd~~~~---~W~~~~~~-p~~r~~~~~~~~~~~iyv~GG~~~~~----~~~~~~~yd~~~~~W~~~~~~- 230 (315)
T 4asc_A 160 DRKCLNKMCVYDPKKF---EWKELAPM-QTARSLFGATVHDGRIIVAAGVTDTG----LTSSAEVYSITDNKWAPFEAF- 230 (315)
T ss_dssp TSCBCCCEEEEETTTT---EEEECCCC-SSCCBSCEEEEETTEEEEEEEECSSS----EEEEEEEEETTTTEEEEECCC-
T ss_pred CCcccceEEEEeCCCC---eEEECCCC-CCchhceEEEEECCEEEEEeccCCCC----ccceEEEEECCCCeEEECCCC-
Confidence 6668999999999887 77787765 78999999999999999999987654 367899999999999999876
Q ss_pred CCCCCCCCccccCCCCCccCCCccceeEEEEECCEEEEEcCCCCC---------CCccceEeeecccc
Q 002047 383 TSPRTGRYSADAAGGDAAVELTRRCRHAAAAVGDLIFIYGGLRGG---------VLLDDLLVAEDLAA 441 (975)
Q Consensus 383 ~~p~~~~~~~~~~~~~~~~~p~~R~~hsa~~~~~~LyV~GG~~~~---------~~l~Dv~~ld~~~~ 441 (975)
|.+|..|++++++++|||+||.++. ..++|+|++|....
T Consensus 231 --------------------p~~r~~~~~~~~~~~l~v~GG~~~~~~~~~~~~~~~~~~v~~yd~~~~ 278 (315)
T 4asc_A 231 --------------------PQERSSLSLVSLVGTLYAIGGFATLETESGELVPTELNDIWRYNEEEK 278 (315)
T ss_dssp --------------------SSCCBSCEEEEETTEEEEEEEEEEEECTTSCEEEEEEEEEEEEETTTT
T ss_pred --------------------CCcccceeEEEECCEEEEECCccccCcCCccccccccCcEEEecCCCC
Confidence 5689999999999999999997531 56899999997653
No 20
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=100.00 E-value=2.4e-34 Score=320.70 Aligned_cols=248 Identities=17% Similarity=0.271 Sum_probs=206.6
Q ss_pred cEEEEECCCCcEEEecCCCCCCCCccceEEEEeCCEEEEEeccCCC-----CCccccEEEEEcCCCCCcEEEEEecCCCC
Q 002047 151 DVHCYDVLTNKWSRITPFGEPPTPRAAHVATAVGTMVVIQGGIGPA-----GLSAEDLHVLDLTQQRPRWHRVVVQGPGP 225 (975)
Q Consensus 151 dv~~yD~~t~~W~~l~~~g~~P~pR~~hsa~~~~~~iyv~GG~~~~-----~~~~~dv~~yD~~t~~~~W~~v~~~g~~P 225 (975)
++++||+.+++|...... .|.+|.+|++++++++||++||.... ....+++++||+.+++ |+.++ ++|
T Consensus 25 ~~~~yd~~~~~W~~~~~~--~~~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~--W~~~~---~~p 97 (318)
T 2woz_A 25 AAVAYDPMENECYLTALA--EQIPRNHSSIVTQQNQVYVVGGLYVDEENKDQPLQSYFFQLDNVSSE--WVGLP---PLP 97 (318)
T ss_dssp EEEEEETTTTEEEEEEEC--TTSCSSEEEEECSSSCEEEEESSCC-------CCCBEEEEEETTTTE--EEECS---CBS
T ss_pred ceEEECCCCCceecccCC--ccCCccceEEEEECCEEEEECCcccCccccCCCccccEEEEeCCCCc--EEECC---CCC
Confidence 478999999999985322 36789999999999999999996321 1234569999999874 99987 899
Q ss_pred CCCcccEEEEeCCcEEEEEcCCC--CCCCCCcEEEEECCCCCcEEEEccCCCCCCCCcceeEEEEEeCCeEEEecCCCCC
Q 002047 226 GPRYGHVMALVGQRYLMAIGGND--GKRPLADVWALDTAAKPYEWRKLEPEGEGPPPCMYATASARSDGLLLLCGGRDAS 303 (975)
Q Consensus 226 ~~R~~h~~~~~~~~~lyV~GG~~--g~~~~ndv~~yDl~s~~~~W~~v~~~~~~P~~r~~~~a~~~~~g~lyvfGG~~~~ 303 (975)
.+|++|+++++++ +|||+||.+ +...++++|+||+.++ +|+.+.+++ .+|..|++ ++.+++||++||.+..
T Consensus 98 ~~r~~~~~~~~~~-~iyv~GG~~~~~~~~~~~~~~yd~~~~--~W~~~~~~p---~~r~~~~~-~~~~~~iyv~GG~~~~ 170 (318)
T 2woz_A 98 SARCLFGLGEVDD-KIYVVAGKDLQTEASLDSVLCYDPVAA--KWSEVKNLP---IKVYGHNV-ISHNGMIYCLGGKTDD 170 (318)
T ss_dssp SCBCSCEEEEETT-EEEEEEEEBTTTCCEEEEEEEEETTTT--EEEEECCCS---SCEESCEE-EEETTEEEEECCEESS
T ss_pred ccccccceEEECC-EEEEEcCccCCCCcccceEEEEeCCCC--CEeECCCCC---CcccccEE-EEECCEEEEEcCCCCC
Confidence 9999999999987 899999986 4567899999999999 999998653 34555554 4579999999998766
Q ss_pred CCCccceEEeecCCCCeEEEEECCCCCCCCcceeeEEEeCCEEEEEcCcCCCCCccccCCcEEEEECCCCeEEEcccCcC
Q 002047 304 SVPLASAYGLAKHRDGRWEWAIAPGVSPSPRYQHAAVFVNARLHVSGGALGGGRMVEDSSSVAVLDTAAGVWCDTKSVVT 383 (975)
Q Consensus 304 ~~~l~d~~~~~~~~~~~W~w~~~~g~~P~~R~~hs~v~~~~~L~V~GG~~~~~~~~~~~~dv~~yD~~t~~W~~v~~~~~ 383 (975)
...+++++.|++.++ +|..++.+ |.+|..|++++++++|||+||.+... ..+++++||+++++|+.+..+
T Consensus 171 ~~~~~~~~~yd~~~~---~W~~~~~~-p~~r~~~~~~~~~~~iyv~GG~~~~~----~~~~~~~yd~~~~~W~~~~~~-- 240 (318)
T 2woz_A 171 KKCTNRVFIYNPKKG---DWKDLAPM-KTPRSMFGVAIHKGKIVIAGGVTEDG----LSASVEAFDLKTNKWEVMTEF-- 240 (318)
T ss_dssp SCBCCCEEEEETTTT---EEEEECCC-SSCCBSCEEEEETTEEEEEEEEETTE----EEEEEEEEETTTCCEEECCCC--
T ss_pred CCccceEEEEcCCCC---EEEECCCC-CCCcccceEEEECCEEEEEcCcCCCC----ccceEEEEECCCCeEEECCCC--
Confidence 667899999998877 66666654 78999999999999999999987643 367899999999999999876
Q ss_pred CCCCCCCccccCCCCCccCCCccceeEEEEECCEEEEEcCCCC---------CCCccceEeeecccc
Q 002047 384 SPRTGRYSADAAGGDAAVELTRRCRHAAAAVGDLIFIYGGLRG---------GVLLDDLLVAEDLAA 441 (975)
Q Consensus 384 ~p~~~~~~~~~~~~~~~~~p~~R~~hsa~~~~~~LyV~GG~~~---------~~~l~Dv~~ld~~~~ 441 (975)
|.+|..|++++++++|||+||.+. ...++|+|++|....
T Consensus 241 -------------------p~~r~~~~~~~~~~~i~v~GG~~~~~~~~~~~~~~~~~~v~~yd~~~~ 288 (318)
T 2woz_A 241 -------------------PQERSSISLVSLAGSLYAIGGFAMIQLESKEFAPTEVNDIWKYEDDKK 288 (318)
T ss_dssp -------------------SSCCBSCEEEEETTEEEEECCBCCBC----CCBCCBCCCEEEEETTTT
T ss_pred -------------------CCcccceEEEEECCEEEEECCeeccCCCCceeccceeeeEEEEeCCCC
Confidence 568999999999999999999765 246899999997653
No 21
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=100.00 E-value=9.1e-35 Score=324.09 Aligned_cols=267 Identities=17% Similarity=0.275 Sum_probs=217.6
Q ss_pred CCCCCCcCceEEEEcccCCCCCCCccCCEEEEEcCCCCCCCCCCCCCCCCCCCCcccccccccCcEEEEECCCCcEEEec
Q 002047 87 DGPGPRCGHTLTAVAAVGEEGTPGYIGPRLILFGGATALEGNSAASGTPSSAGSAGIRLAGATADVHCYDVLTNKWSRIT 166 (975)
Q Consensus 87 ~~P~pR~ght~t~~~~~~~~~~~~~~~~~lyvfGG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dv~~yD~~t~~W~~l~ 166 (975)
..|.||.+|+++++ +++||||||........ .....+++++||+.+++|+.++
T Consensus 42 ~~~~~r~~~~~~~~------------~~~lyv~GG~~~~~~~~---------------~~~~~~~~~~~d~~~~~W~~~~ 94 (318)
T 2woz_A 42 AEQIPRNHSSIVTQ------------QNQVYVVGGLYVDEENK---------------DQPLQSYFFQLDNVSSEWVGLP 94 (318)
T ss_dssp CTTSCSSEEEEECS------------SSCEEEEESSCC----------------------CCCBEEEEEETTTTEEEECS
T ss_pred CccCCccceEEEEE------------CCEEEEECCcccCcccc---------------CCCccccEEEEeCCCCcEEECC
Confidence 44689999999887 78999999964321100 0014567999999999999998
Q ss_pred CCCCCCCCccceEEEEeCCEEEEEeccCC-CCCccccEEEEEcCCCCCcEEEEEecCCCCCCCcccEEEEeCCcEEEEEc
Q 002047 167 PFGEPPTPRAAHVATAVGTMVVIQGGIGP-AGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGPRYGHVMALVGQRYLMAIG 245 (975)
Q Consensus 167 ~~g~~P~pR~~hsa~~~~~~iyv~GG~~~-~~~~~~dv~~yD~~t~~~~W~~v~~~g~~P~~R~~h~~~~~~~~~lyV~G 245 (975)
++ |.+|..|++++++++|||+||... .....+++++||+.+++ |+.+. ++|.+|++|+++++++ +|||+|
T Consensus 95 ~~---p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~--W~~~~---~~p~~r~~~~~~~~~~-~iyv~G 165 (318)
T 2woz_A 95 PL---PSARCLFGLGEVDDKIYVVAGKDLQTEASLDSVLCYDPVAAK--WSEVK---NLPIKVYGHNVISHNG-MIYCLG 165 (318)
T ss_dssp CB---SSCBCSCEEEEETTEEEEEEEEBTTTCCEEEEEEEEETTTTE--EEEEC---CCSSCEESCEEEEETT-EEEEEC
T ss_pred CC---CccccccceEEECCEEEEEcCccCCCCcccceEEEEeCCCCC--EeECC---CCCCcccccEEEEECC-EEEEEc
Confidence 76 889999999999999999999863 45668999999999975 99997 8999999999999988 899999
Q ss_pred CCC-CCCCCCcEEEEECCCCCcEEEEccCCCCCCCCcceeEEEEEeCCeEEEecCCCCCCCCccceEEeecCCCCeEEEE
Q 002047 246 GND-GKRPLADVWALDTAAKPYEWRKLEPEGEGPPPCMYATASARSDGLLLLCGGRDASSVPLASAYGLAKHRDGRWEWA 324 (975)
Q Consensus 246 G~~-g~~~~ndv~~yDl~s~~~~W~~v~~~~~~P~~r~~~~a~~~~~g~lyvfGG~~~~~~~l~d~~~~~~~~~~~W~w~ 324 (975)
|.+ +...++++|+||+.++ +|+.+.+++ .+|..|++ ++.+++|||+||.+... .+++++.|++.++ +|.
T Consensus 166 G~~~~~~~~~~~~~yd~~~~--~W~~~~~~p---~~r~~~~~-~~~~~~iyv~GG~~~~~-~~~~~~~yd~~~~---~W~ 235 (318)
T 2woz_A 166 GKTDDKKCTNRVFIYNPKKG--DWKDLAPMK---TPRSMFGV-AIHKGKIVIAGGVTEDG-LSASVEAFDLKTN---KWE 235 (318)
T ss_dssp CEESSSCBCCCEEEEETTTT--EEEEECCCS---SCCBSCEE-EEETTEEEEEEEEETTE-EEEEEEEEETTTC---CEE
T ss_pred CCCCCCCccceEEEEcCCCC--EEEECCCCC---CCcccceE-EEECCEEEEEcCcCCCC-ccceEEEEECCCC---eEE
Confidence 984 4567899999999999 999998653 44555555 55699999999987654 5789999988877 667
Q ss_pred ECCCCCCCCcceeeEEEeCCEEEEEcCcCCCCC-----ccccCCcEEEEECCCCeEEEcccCcCCCCCCCCccccCCCCC
Q 002047 325 IAPGVSPSPRYQHAAVFVNARLHVSGGALGGGR-----MVEDSSSVAVLDTAAGVWCDTKSVVTSPRTGRYSADAAGGDA 399 (975)
Q Consensus 325 ~~~g~~P~~R~~hs~v~~~~~L~V~GG~~~~~~-----~~~~~~dv~~yD~~t~~W~~v~~~~~~p~~~~~~~~~~~~~~ 399 (975)
.+..+ |.+|..|++++++++|||+||.+.... .....+++|+||+++++|+++ +
T Consensus 236 ~~~~~-p~~r~~~~~~~~~~~i~v~GG~~~~~~~~~~~~~~~~~~v~~yd~~~~~W~~~--~------------------ 294 (318)
T 2woz_A 236 VMTEF-PQERSSISLVSLAGSLYAIGGFAMIQLESKEFAPTEVNDIWKYEDDKKEWAGM--L------------------ 294 (318)
T ss_dssp ECCCC-SSCCBSCEEEEETTEEEEECCBCCBC----CCBCCBCCCEEEEETTTTEEEEE--E------------------
T ss_pred ECCCC-CCcccceEEEEECCEEEEECCeeccCCCCceeccceeeeEEEEeCCCCEehhh--c------------------
Confidence 77654 789999999999999999999865311 012368999999999999998 3
Q ss_pred ccCCCccceeEEEEECCEEEEEcC
Q 002047 400 AVELTRRCRHAAAAVGDLIFIYGG 423 (975)
Q Consensus 400 ~~~p~~R~~hsa~~~~~~LyV~GG 423 (975)
+.+|+.|++++++++|||+..
T Consensus 295 ---~~~r~~~~~~~~~~~iyi~~~ 315 (318)
T 2woz_A 295 ---KEIRYASGASCLATRLNLFKL 315 (318)
T ss_dssp ---SCCGGGTTCEEEEEEEEGGGC
T ss_pred ---ccccccccceeeCCEEEEEEe
Confidence 348999999999999999853
No 22
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=100.00 E-value=2.7e-34 Score=353.69 Aligned_cols=295 Identities=14% Similarity=0.159 Sum_probs=236.2
Q ss_pred CCCCCCCCcCceEEEEcccCCCCCCCccCCEEEEEcCCCCCCCCCCCCCCCCCCCCcccccccccCcEEEEECCCCcEEE
Q 002047 85 KEDGPGPRCGHTLTAVAAVGEEGTPGYIGPRLILFGGATALEGNSAASGTPSSAGSAGIRLAGATADVHCYDVLTNKWSR 164 (975)
Q Consensus 85 ~~~~P~pR~ght~t~~~~~~~~~~~~~~~~~lyvfGG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dv~~yD~~t~~W~~ 164 (975)
....|.+|++|+++ + +++||||||... . ..+++++||+.+++|+.
T Consensus 382 ~~~~p~rr~g~~~~-~------------~~~iyv~GG~~~-~---------------------~~~~v~~yd~~~~~W~~ 426 (695)
T 2zwa_A 382 CECPINRKFGDVDV-A------------GNDVFYMGGSNP-Y---------------------RVNEILQLSIHYDKIDM 426 (695)
T ss_dssp CCCTTCCBSCEEEE-C------------SSCEEEECCBSS-S---------------------BCCCEEEEEECSSCEEE
T ss_pred cCCCCCCceeEEEE-E------------CCEEEEECCCCC-C---------------------CcCcEEEEECCCCeEEE
Confidence 35678888887766 5 688999999764 2 67899999999999999
Q ss_pred ec-C--CCCCCCCccceEEEEe--CCEEEEEeccCCCCCccccEEEEEcCCCCCcEEEEEecCCCCCCCcccEEEEeCCc
Q 002047 165 IT-P--FGEPPTPRAAHVATAV--GTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGPRYGHVMALVGQR 239 (975)
Q Consensus 165 l~-~--~g~~P~pR~~hsa~~~--~~~iyv~GG~~~~~~~~~dv~~yD~~t~~~~W~~v~~~g~~P~~R~~h~~~~~~~~ 239 (975)
+. + .+..|.+|.+|+++++ +++|||+||.......++++|+||+.+++ |+.+. ++|.+|++|+++++.++
T Consensus 427 ~~~~~p~~~~p~~R~~hs~~~~~~~~~lyv~GG~~~~~~~~~dv~~yd~~t~~--W~~~~---~~p~~R~~h~~~~~~~~ 501 (695)
T 2zwa_A 427 KNIEVSSSEVPVARMCHTFTTISRNNQLLLIGGRKAPHQGLSDNWIFDMKTRE--WSMIK---SLSHTRFRHSACSLPDG 501 (695)
T ss_dssp EECCCCCSCCCCCCBSCEEEEETTTTEEEEECCBSSTTCBCCCCEEEETTTTE--EEECC---CCSBCCBSCEEEECTTS
T ss_pred eccCCCCCCCCccccceEEEEEccCCEEEEEcCCCCCCCccccEEEEeCCCCc--EEECC---CCCCCcccceEEEEcCC
Confidence 98 5 2456999999999999 99999999997666678999999999985 99996 89999999999997334
Q ss_pred EEEEEcCCCCCCCCCcEEEEECCCCCcEEEEccCCCCCCCCcceeEEEEEe-C-CeEEEecCCCCCC-CCccceEEeecC
Q 002047 240 YLMAIGGNDGKRPLADVWALDTAAKPYEWRKLEPEGEGPPPCMYATASARS-D-GLLLLCGGRDASS-VPLASAYGLAKH 316 (975)
Q Consensus 240 ~lyV~GG~~g~~~~ndv~~yDl~s~~~~W~~v~~~~~~P~~r~~~~a~~~~-~-g~lyvfGG~~~~~-~~l~d~~~~~~~ 316 (975)
+||||||.++.. ++|+||+.++ +|+.+.+.+..|.+|..|+++++. + ++||||||...++ ..++++|.|++.
T Consensus 502 ~iyv~GG~~~~~---~v~~yd~~t~--~W~~~~~~g~~p~~r~~~~a~v~~~~~~~iyv~GG~~~~~~~~~~~v~~yd~~ 576 (695)
T 2zwa_A 502 NVLILGGVTEGP---AMLLYNVTEE--IFKDVTPKDEFFQNSLVSAGLEFDPVSKQGIILGGGFMDQTTVSDKAIIFKYD 576 (695)
T ss_dssp CEEEECCBCSSC---SEEEEETTTT--EEEECCCSSGGGGSCCBSCEEEEETTTTEEEEECCBCTTSSCBCCEEEEEEEC
T ss_pred EEEEECCCCCCC---CEEEEECCCC--ceEEccCCCCCCCcccceeEEEEeCCCCEEEEECCcCCCCCeeeCcEEEEEcc
Confidence 899999997765 9999999999 999999877677788888866654 2 8999999986654 568999999888
Q ss_pred CCCeE----EEEECCCCCCCCcceeeEEEeC-CEEEEEcCcCCCCCccccCCcEEEEECCCCeEEEcccCcCCCCCCCCc
Q 002047 317 RDGRW----EWAIAPGVSPSPRYQHAAVFVN-ARLHVSGGALGGGRMVEDSSSVAVLDTAAGVWCDTKSVVTSPRTGRYS 391 (975)
Q Consensus 317 ~~~~W----~w~~~~g~~P~~R~~hs~v~~~-~~L~V~GG~~~~~~~~~~~~dv~~yD~~t~~W~~v~~~~~~p~~~~~~ 391 (975)
++ .| +|..+..+++.+|.+|++++++ ++|||+||.+.... ....+++++||+.+++|+.+......
T Consensus 577 ~~-~w~~~~~W~~~~~~p~~~R~~~~~~~~~~~~iyv~GG~~~~~~-~~~~~~v~~yd~~t~~W~~~~~p~~~------- 647 (695)
T 2zwa_A 577 AE-NATEPITVIKKLQHPLFQRYGSQIKYITPRKLLIVGGTSPSGL-FDRTNSIISLDPLSETLTSIPISRRI------- 647 (695)
T ss_dssp TT-CSSCCEEEEEEEECGGGCCBSCEEEEEETTEEEEECCBCSSCC-CCTTTSEEEEETTTTEEEECCCCHHH-------
T ss_pred CC-ccccceEEEEcCCCCCCCcccceEEEeCCCEEEEECCccCCCC-CCCCCeEEEEECCCCeEEEeeccccc-------
Confidence 76 43 4666655556899999999999 99999999865432 13478899999999999954321000
Q ss_pred cccCCCCCccCCCccceeEEEEECC-EEEEEcC----CCCCCCccceEeeeccc
Q 002047 392 ADAAGGDAAVELTRRCRHAAAAVGD-LIFIYGG----LRGGVLLDDLLVAEDLA 440 (975)
Q Consensus 392 ~~~~~~~~~~~p~~R~~hsa~~~~~-~LyV~GG----~~~~~~l~Dv~~ld~~~ 440 (975)
....+..+.+|+++.+++ +|||+|| +..+..+|++|.+|+..
T Consensus 648 -------~~~~~p~~~gh~~~~~~~g~i~v~GGg~~cfsfGt~~n~i~~ldl~~ 694 (695)
T 2zwa_A 648 -------WEDHSLMLAGFSLVSTSMGTIHIIGGGATCYGFGSVTNVGLKLIAIA 694 (695)
T ss_dssp -------HHHSCCCCSSCEEECC---CEEEECCEEECTTSCEEECCCEEEEECC
T ss_pred -------cCCCCccceeeeEEEeCCCEEEEEeCCccCcCccccccceEEEEEEc
Confidence 000112678899998877 9999999 34567889999999753
No 23
>2z72_A Protein-tyrosine-phosphatase; cold-active enzyme, psychrophIle, hydrolase; 1.10A {Shewanella SP} PDB: 1v73_A 2zbm_A
Probab=100.00 E-value=7.7e-36 Score=335.90 Aligned_cols=243 Identities=18% Similarity=0.202 Sum_probs=189.9
Q ss_pred HhcCCCeeeecCCEEEEecCCCCHHHHHHHHHHhCCCCCCCCc--cceeEEEeccccCCCCChHHHHHHHHHhhh---cC
Q 002047 687 FSSEPSVLQLKAPIKIFGDLHGQFGDLMRLFDEYGSPSTAGDI--AYIDYLFLGDYVDRGQHSLETITLLLALKV---EY 761 (975)
Q Consensus 687 ~~~ep~~l~l~~~i~vvGDiHG~~~~L~~ll~~~g~~~~~~~~--~~~~~vfLGDyVDRG~~s~evl~ll~~lk~---~~ 761 (975)
|++|++++...++|+|||||||++.+|.++|+..++++.+..+ ....+||||||||||++++||+.+|++|+. .+
T Consensus 60 ~~~~~~~~~~~~~i~vigDiHG~~~~l~~ll~~~~~~~~~~~~~~~~d~~v~lGD~vdrG~~s~evl~~l~~l~~~~~~~ 139 (342)
T 2z72_A 60 KQIMPDTYLGIKKVVALSDVHGQYDVLLTLLKKQKIIDSDGNWAFGEGHMVMTGDIFDRGHQVNEVLWFMYQLDQQARDA 139 (342)
T ss_dssp TSCCCSEECCCCEEEEECCCTTCHHHHHHHHHHTTSBCTTSCBCCTTCEEEECSCCSSSSSCHHHHHHHHHHHHHHHHHT
T ss_pred cccCcceecCCCCEEEEECCCCCHHHHHHHHHhcCCCcccccccCCCCEEEEECCCcCCCCCHHHHHHHHHHHHHHHhhC
Confidence 8899999999999999999999999999999999876533211 112799999999999999999999999986 79
Q ss_pred CCCEEEEeccccccchhhhc----CChHHHHHHhCCcccchhhhhhh---ccccccceEEEEcceEEEecCCccCccc--
Q 002047 762 PNNVHLIRGNHEAADINALF----GFRIECIERMGERDGIWAWHRIN---RLFNWLPLAALIEKKIICMHGGIGRSIN-- 832 (975)
Q Consensus 762 P~~v~llrGNHE~~~~~~~~----gf~~e~~~~~g~~~~~~~~~~~~---~~f~~LPlaa~i~~~il~vHgGi~~~~~-- 832 (975)
|.++++||||||.+.++..+ +.+..+.+.++.. ...+|..+. ++|..||++++++ +++|||||++|.+.
T Consensus 140 ~~~v~~v~GNHE~~~l~~~~~~~~~~~~~~~~~~~~~-~~~l~~~~~~~~~~L~~lP~~~~~~-~~~~vHgGl~p~~~~~ 217 (342)
T 2z72_A 140 GGMVHLLMGNHEQMVLGGDLRYVHQRYDIATTLINRP-YNKLYSADTEIGQWLRSKNTIIKIN-DVLYMHGGISSEWISR 217 (342)
T ss_dssp TCEEEECCCHHHHHHHHTCCTTSCTTHHHHHHHTTSC-GGGGGSTTBHHHHHHHTCCSEEEET-TEEEESSCCCHHHHHT
T ss_pred CCeEEEEecCCcHHHhhCcccccccccchHHHHhccc-HHHHHHHhHHHHHHHhhCCeEEEEC-CEEEEECCCChhhccc
Confidence 99999999999999886421 1222222223322 234555444 4555669999887 79999999999874
Q ss_pred --CHhhhhhccCCcccCC----CCcceeccccCCCCCCCCCCCcccCCCCCceeeeCHHHHHHHHHHcCCeEEEEecccc
Q 002047 833 --HVEQIENLQRPITMEA----GSIVLMDLLWSDPTENDSVEGLRPNARGPGLVTFGPDRVMEFCNNNDLQLIVRAHECV 906 (975)
Q Consensus 833 --~~~~i~~i~rp~~~~~----~~~~~~dllWsdP~~~~~~~~~~~n~rg~~~~~fg~~~~~~fl~~~~l~~iiR~H~~~ 906 (975)
++++|+.+.|+..... ....++++||+||.. .| .||.....||.+++++||+.+++++|||||+++
T Consensus 218 ~~~l~~i~~~~r~~~~~~~~~~~~~~~~~~lwsd~~~-----~w---~R~~~~~~fg~~~~~~fl~~~~~~~IV~GHt~~ 289 (342)
T 2z72_A 218 ELTLDKANALYRANVDASKKSLKADDLLNFLFFGNGP-----TW---YRGYFSETFTEAELDTILQHFNVNHIVVGHTSQ 289 (342)
T ss_dssp TCCHHHHHHHHHHHTTSCHHHHHHSHHHHHHHSTTST-----TT---CCGGGSTTCCHHHHHHHHHHHTCSEEEECSSCC
T ss_pred CCCHHHHHHHhhhhccccccccccCHHHHhccCCCCC-----CC---cCCcccccCChHHHHHHHHHCCCcEEEECCCcc
Confidence 8999998888632110 012567999999864 24 466522479999999999999999999999999
Q ss_pred ccceEEecCCeEEEEeccccccCCCCCcEEEEEEcCCc
Q 002047 907 MDGFERFAQGHLITLFSATNYCGTANNAGAILVLGRDL 944 (975)
Q Consensus 907 ~~G~~~~~~~~~iTvfSa~~y~~~~~n~ga~l~i~~~~ 944 (975)
++ +...+++++|||||+++|. |.+++|.|+++.
T Consensus 290 ~~-~~~~~~~~~i~Idsg~~~g----g~la~l~i~~~~ 322 (342)
T 2z72_A 290 ER-VLGLFHNKVIAVDSSIKVG----KSGELLLLENNR 322 (342)
T ss_dssp SS-CEEETTTTEEECCCCGGGS----SCCCEEEEETTE
T ss_pred cc-hhhhcCCCEEEEECCCCCC----CcEEEEEEECCE
Confidence 76 6677899999999999994 678888888764
No 24
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=99.97 E-value=3.5e-30 Score=291.42 Aligned_cols=253 Identities=22% Similarity=0.286 Sum_probs=194.0
Q ss_pred EeecCCCCC-CCCcCceEEEEcccCCCCCCCccCCEEEEEcCCCC-CCCCCCCCCCCCCCCCcccccccccCcEEEEECC
Q 002047 81 VIEKKEDGP-GPRCGHTLTAVAAVGEEGTPGYIGPRLILFGGATA-LEGNSAASGTPSSAGSAGIRLAGATADVHCYDVL 158 (975)
Q Consensus 81 ~~~~~~~~P-~pR~ght~t~~~~~~~~~~~~~~~~~lyvfGG~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~dv~~yD~~ 158 (975)
.|......| .||++|+++++ +++||||||... ... ....++++++||+.
T Consensus 44 ~W~~~~~~p~~~R~~~~~~~~------------~~~lyv~GG~~~~~~~-----------------~~~~~~~v~~yd~~ 94 (357)
T 2uvk_A 44 KWTALAAFPGGPRDQATSAFI------------DGNLYVFGGIGKNSEG-----------------LTQVFNDVHKYNPK 94 (357)
T ss_dssp CEEECCCCTTCCCBSCEEEEE------------TTEEEEECCEEECTTS-----------------CEEECCCEEEEETT
T ss_pred CeeECCCCCCCcCccceEEEE------------CCEEEEEcCCCCCCCc-----------------cceeeccEEEEeCC
Confidence 345667788 89999999999 789999999722 110 01178999999999
Q ss_pred CCcEEEecCCCCCCCCccceEEEEeCCEEEEEeccCCCC---------------------------------CccccEEE
Q 002047 159 TNKWSRITPFGEPPTPRAAHVATAVGTMVVIQGGIGPAG---------------------------------LSAEDLHV 205 (975)
Q Consensus 159 t~~W~~l~~~g~~P~pR~~hsa~~~~~~iyv~GG~~~~~---------------------------------~~~~dv~~ 205 (975)
+++|+++.++. |.+|.+|++++++++|||+||..... ...+++++
T Consensus 95 ~~~W~~~~~~~--p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~ 172 (357)
T 2uvk_A 95 TNSWVKLMSHA--PMGMAGHVTFVHNGKAYVTGGVNQNIFNGYFEDLNEAGKDSTAIDKINAHYFDKKAEDYFFNKFLLS 172 (357)
T ss_dssp TTEEEECSCCC--SSCCSSEEEEEETTEEEEEECCCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHSSCGGGGCCCCEEEE
T ss_pred CCcEEECCCCC--CcccccceEEEECCEEEEEeCcCCCcCcccccchhhcCCcccchhhhhhhhccccccccCCcccEEE
Confidence 99999999884 79999999999999999999975321 23589999
Q ss_pred EEcCCCCCcEEEEEecCCCCCCC-cccEEEEeCCcEEEEEcCCCCC-CCCCcEEEEEC--CCCCcEEEEccCCCCCCCCc
Q 002047 206 LDLTQQRPRWHRVVVQGPGPGPR-YGHVMALVGQRYLMAIGGNDGK-RPLADVWALDT--AAKPYEWRKLEPEGEGPPPC 281 (975)
Q Consensus 206 yD~~t~~~~W~~v~~~g~~P~~R-~~h~~~~~~~~~lyV~GG~~g~-~~~ndv~~yDl--~s~~~~W~~v~~~~~~P~~r 281 (975)
||+.+++ |+.+. ++|.+| .+|+++++++ +||||||.++. ...+++++||+ .++ +|+.+.+++. |. .
T Consensus 173 yd~~~~~--W~~~~---~~p~~~~~~~~~~~~~~-~iyv~GG~~~~~~~~~~v~~~d~d~~~~--~W~~~~~~~~-~~-~ 242 (357)
T 2uvk_A 173 FDPSTQQ--WSYAG---ESPWYGTAGAAVVNKGD-KTWLINGEAKPGLRTDAVFELDFTGNNL--KWNKLAPVSS-PD-G 242 (357)
T ss_dssp EETTTTE--EEEEE---ECSSCCCBSCEEEEETT-EEEEECCEEETTEECCCEEEEECC---C--EEEECCCSST-TT-C
T ss_pred EeCCCCc--EEECC---CCCCCCcccccEEEECC-EEEEEeeecCCCcccCceEEEEecCCCC--cEEecCCCCC-Cc-c
Confidence 9999975 99997 778765 4599999988 89999998653 35789999987 778 9999988732 22 2
Q ss_pred ceeEEEEEeCCeEEEecCCCCC----------------CCCccceEEeecCCCCeEEEEECCCCCCCCcceeeEEEeCCE
Q 002047 282 MYATASARSDGLLLLCGGRDAS----------------SVPLASAYGLAKHRDGRWEWAIAPGVSPSPRYQHAAVFVNAR 345 (975)
Q Consensus 282 ~~~~a~~~~~g~lyvfGG~~~~----------------~~~l~d~~~~~~~~~~~W~w~~~~g~~P~~R~~hs~v~~~~~ 345 (975)
+..+++++.+++|||+||.+.. ...+++++.|++.++ +| ..+.. .|.+|..|+++.++++
T Consensus 243 ~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~g~~~~~~~~~~~~~~~~yd~~~~-~W--~~~~~-~p~~r~~~~~~~~~~~ 318 (357)
T 2uvk_A 243 VAGGFAGISNDSLIFAGGAGFKGSRENYQNGKNYAHEGLKKSYSTDIHLWHNG-KW--DKSGE-LSQGRAYGVSLPWNNS 318 (357)
T ss_dssp CBSCEEEEETTEEEEECCEECTTHHHHHHTTCSSTTTTCCCEECCEEEECC----C--EEEEE-CSSCCBSSEEEEETTE
T ss_pred cccceEEEECCEEEEEcCccccCCcccccccceeccccccceeeEEEEecCCC-ce--eeCCC-CCCCcccceeEEeCCE
Confidence 3445566679999999997432 223578889988765 44 45544 4789999999999999
Q ss_pred EEEEcCcCCCCCccccCCcEEEEECCCCeEEEcccC
Q 002047 346 LHVSGGALGGGRMVEDSSSVAVLDTAAGVWCDTKSV 381 (975)
Q Consensus 346 L~V~GG~~~~~~~~~~~~dv~~yD~~t~~W~~v~~~ 381 (975)
|||+||.+..+. ..++|++|++++++|......
T Consensus 319 i~v~GG~~~~~~---~~~~v~~l~~~~~~~~~~~~~ 351 (357)
T 2uvk_A 319 LLIIGGETAGGK---AVTDSVLITVKDNKVTVQNLE 351 (357)
T ss_dssp EEEEEEECGGGC---EEEEEEEEEC-CCSCEEEC--
T ss_pred EEEEeeeCCCCC---EeeeEEEEEEcCcEeEeeecc
Confidence 999999876543 268999999999999988766
No 25
>2dfj_A Diadenosinetetraphosphatase; helices and strands mixture, hydrolase; 2.72A {Shigella flexneri 2A}
Probab=99.95 E-value=1.3e-30 Score=284.72 Aligned_cols=202 Identities=20% Similarity=0.335 Sum_probs=160.7
Q ss_pred CCEEEEecCCCCHHHHHHHHHHhCCCCCCCCccceeEEEeccccCCCCChHHHHHHHHHhhhcCCCCEEEEeccccccch
Q 002047 698 APIKIFGDLHGQFGDLMRLFDEYGSPSTAGDIAYIDYLFLGDYVDRGQHSLETITLLLALKVEYPNNVHLIRGNHEAADI 777 (975)
Q Consensus 698 ~~i~vvGDiHG~~~~L~~ll~~~g~~~~~~~~~~~~~vfLGDyVDRG~~s~evl~ll~~lk~~~P~~v~llrGNHE~~~~ 777 (975)
++|+||||||||+.+|.++|+.+++++..+ .+||||||||||++++|||.+|++| |.++++||||||.+.+
T Consensus 1 M~i~vigDiHG~~~~l~~ll~~~~~~~~~d-----~~v~lGD~vdrG~~s~~~l~~l~~l----~~~~~~v~GNHe~~~l 71 (280)
T 2dfj_A 1 MATYLIGDVHGCYDELIALLHKVEFTPGKD-----TLWLTGDLVARGPGSLDVLRYVKSL----GDSVRLVLGNHDLHLL 71 (280)
T ss_dssp -CEEEECCCCSCHHHHHHHHHHTTCCTTTC-----EEEECSCCSSSSSCHHHHHHHHHHT----GGGEEECCCHHHHHHH
T ss_pred CeEEEEecCCCCHHHHHHHHHHhCCCCCCC-----EEEEeCCcCCCCCccHHHHHHHHhC----CCceEEEECCCcHHHH
Confidence 579999999999999999999999843322 7999999999999999999999987 3589999999999999
Q ss_pred hhhcCChHHHHHHhCCc-ccchhhhhhhccccccceEEEEcc-eEEEecCCccCcccCHhhhhhccCCccc---CCCCcc
Q 002047 778 NALFGFRIECIERMGER-DGIWAWHRINRLFNWLPLAALIEK-KIICMHGGIGRSINHVEQIENLQRPITM---EAGSIV 852 (975)
Q Consensus 778 ~~~~gf~~e~~~~~g~~-~~~~~~~~~~~~f~~LPlaa~i~~-~il~vHgGi~~~~~~~~~i~~i~rp~~~---~~~~~~ 852 (975)
+..+||..+.....-.. .....+..+.++|+.||+++.+++ +++||||||+|.+ ++++++.+.|+++. ......
T Consensus 72 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~lP~~~~~~~~~~~~vHaGi~p~~-~l~~~~~~~r~~e~~l~~~~~~~ 150 (280)
T 2dfj_A 72 AVFAGISRNKPKDRLTPLLEAPDADELLNWLRRQPLLQIDEEKKLVMAHAGITPQW-DLQTAKECARDVEAVLSSDSYPF 150 (280)
T ss_dssp HHHTTSSCCCGGGCCHHHHTSTTHHHHHHHHHTSCSEEEETTTTEEEESSCCCTTC-CHHHHHHHHHHHHHHHHSTTHHH
T ss_pred hHhcCCcccchhhhHHHHhhhhHHHHHHHHHHhCCcEEEECCCeEEEEeCCCCcCc-CHHHHHHHHHHHHHhhcCCcHHH
Confidence 99998764211000000 001133456677888899988887 9999999999997 79999888877652 112235
Q ss_pred eeccccCCCCCCCCCCCcccCCCCCceeeeCHHHH--HHHHHHcC-CeEEEEec-cccccceEEec
Q 002047 853 LMDLLWSDPTENDSVEGLRPNARGPGLVTFGPDRV--MEFCNNND-LQLIVRAH-ECVMDGFERFA 914 (975)
Q Consensus 853 ~~dllWsdP~~~~~~~~~~~n~rg~~~~~fg~~~~--~~fl~~~~-l~~iiR~H-~~~~~G~~~~~ 914 (975)
++++||+||. ..|.++.||.+.+.||.+++ .+||+.+| +++++|+| |.+++||+.++
T Consensus 151 ~~~~l~~d~~-----~~w~~~~~G~~r~~~~~~~~tr~rf~~~~g~l~~~~r~~~~~~~~g~~~w~ 211 (280)
T 2dfj_A 151 FLDAMYGDMP-----NNWSPELRGLGRLRFITNAFTRMRFCFPNGQLDMYSKESPEEAPAPLKPWF 211 (280)
T ss_dssp HHHHTTCSCC-----CSCCTTCCHHHHHHHHHHHHHTCCEEETTBEEESSCCSCGGGCCSSCEEGG
T ss_pred HHHHhcCCCC-----CCcCCCCCCceeEEEeccHHHHHHHhhcCCcEeEEeccChhhcCccccchh
Confidence 7899999996 36999999998778999984 66999999 99999999 88899998765
No 26
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=99.95 E-value=1.5e-27 Score=292.47 Aligned_cols=274 Identities=15% Similarity=0.098 Sum_probs=201.8
Q ss_pred CCCCcCceEEEEcccCCCCCCCccCCEEEEEcCCCCCCCCCCCCCCCCCCCCcccccccccCcEEEEECCCCcEEEecCC
Q 002047 89 PGPRCGHTLTAVAAVGEEGTPGYIGPRLILFGGATALEGNSAASGTPSSAGSAGIRLAGATADVHCYDVLTNKWSRITPF 168 (975)
Q Consensus 89 P~pR~ght~t~~~~~~~~~~~~~~~~~lyvfGG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dv~~yD~~t~~W~~l~~~ 168 (975)
|.||.+|+++++.. +++||+|||........ .....+++++||+.+++|+.+..+
T Consensus 183 ~~P~~~~~~av~~~----------~g~l~v~GG~~~~~~~~---------------~~~~~~~~~~yd~~t~~w~~~~~~ 237 (656)
T 1k3i_A 183 DLPIVPAAAAIEPT----------SGRVLMWSSYRNDAFGG---------------SPGGITLTSSWDPSTGIVSDRTVT 237 (656)
T ss_dssp ECSSCCSEEEEETT----------TTEEEEEEECCCTTTCS---------------CCCSEEEEEEECTTTCCBCCCEEE
T ss_pred cCCCCceeEEEEec----------CCEEEEEeccccccccc---------------CCCCeEEEEEEeCCCCcEEeCccc
Confidence 56778888887731 58999999986432100 001345799999999999998776
Q ss_pred CCCCCCccceE--EEE-eCCEEEEEeccCCCCCccccEEEEEcCCCCCcEEEEEecCCCCCCCcccEEEEeCCcEEEEEc
Q 002047 169 GEPPTPRAAHV--ATA-VGTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGPRYGHVMALVGQRYLMAIG 245 (975)
Q Consensus 169 g~~P~pR~~hs--a~~-~~~~iyv~GG~~~~~~~~~dv~~yD~~t~~~~W~~v~~~g~~P~~R~~h~~~~~~~~~lyV~G 245 (975)
|.+|..|+ +++ .+++||++||... .++++||+.+++ |+.++ +||.+|+.|+++++.+++|||+|
T Consensus 238 ---~~~~~~~~~~~~~~~~g~lyv~GG~~~-----~~v~~yd~~t~~--W~~~~---~~~~~R~~~s~~~~~dg~iyv~G 304 (656)
T 1k3i_A 238 ---VTKHDMFCPGISMDGNGQIVVTGGNDA-----KKTSLYDSSSDS--WIPGP---DMQVARGYQSSATMSDGRVFTIG 304 (656)
T ss_dssp ---ECSCCCSSCEEEECTTSCEEEECSSST-----TCEEEEEGGGTE--EEECC---CCSSCCSSCEEEECTTSCEEEEC
T ss_pred ---CCCCCCccccccCCCCCCEEEeCCCCC-----CceEEecCcCCc--eeECC---CCCccccccceEEecCCeEEEEe
Confidence 56665553 444 4789999999743 379999999874 99987 89999999999999334899999
Q ss_pred C-CCCCCCCCcEEEEECCCCCcEEEEccC-----CCCC------------------------------------------
Q 002047 246 G-NDGKRPLADVWALDTAAKPYEWRKLEP-----EGEG------------------------------------------ 277 (975)
Q Consensus 246 G-~~g~~~~ndv~~yDl~s~~~~W~~v~~-----~~~~------------------------------------------ 277 (975)
| .++...++++++||+.++ +|+.+.. +...
T Consensus 305 G~~~~~~~~~~~e~yd~~t~--~W~~~~~~~~~p~~~~~~~~~~~~~~~iyv~Gg~~g~~~~~~~~~~v~~yd~~~~~w~ 382 (656)
T 1k3i_A 305 GSWSGGVFEKNGEVYSPSSK--TWTSLPNAKVNPMLTADKQGLYRSDNHAWLFGWKKGSVFQAGPSTAMNWYYTSGSGDV 382 (656)
T ss_dssp CCCCSSSCCCCEEEEETTTT--EEEEETTSCSGGGCCCCTTGGGTTTCSCCEEECGGGCEEECCSSSEEEEEECSTTCEE
T ss_pred CcccCCcccccceEeCCCCC--cceeCCCccccccccccccceeecCCceEEEECCCCcEEEecCccceeeeecCCccee
Confidence 9 566678899999999999 9999732 2111
Q ss_pred ------------CCCcceeEEEE--EeCCeEEEecCCCCC--CCCcc---ceEEeecCCCCeEEEEECCCCCCCCcceee
Q 002047 278 ------------PPPCMYATASA--RSDGLLLLCGGRDAS--SVPLA---SAYGLAKHRDGRWEWAIAPGVSPSPRYQHA 338 (975)
Q Consensus 278 ------------P~~r~~~~a~~--~~~g~lyvfGG~~~~--~~~l~---d~~~~~~~~~~~W~w~~~~g~~P~~R~~hs 338 (975)
++++..++++. ..+++||++||.+.. ...++ .++.|++..+ .|.... .+.+|.+|..|+
T Consensus 383 ~~~~~~~~~~~~~~~~~~~~av~~~~~~~~i~v~GG~~~~~~~~~~~~~~~v~~yd~~~~-~W~~~~-~~~mp~~R~~~~ 460 (656)
T 1k3i_A 383 KSAGKRQSNRGVAPDAMCGNAVMYDAVKGKILTFGGSPDYQDSDATTNAHIITLGEPGTS-PNTVFA-SNGLYFARTFHT 460 (656)
T ss_dssp EEEEECEETTEECCCCBTCEEEEEETTTTEEEEECCBSSSSSSBCCCCEEEEECCSTTSC-CEEEEC-TTCCSSCCBSCE
T ss_pred ecCCccccccccCCCCCCCceEeccCCCCeEEEEeCCCCCCCCCcCCcceEEEcCCCCCC-CeeEEc-cCCCCCCcccCC
Confidence 11123344443 258999999997431 22344 5667766655 554433 144589999999
Q ss_pred EEEe-CCEEEEEcCcCCCCC--ccccCCcEEEEECCCCeEEEcccCcCCCCCCCCccccCCCCCccCCCccceeEEEEE-
Q 002047 339 AVFV-NARLHVSGGALGGGR--MVEDSSSVAVLDTAAGVWCDTKSVVTSPRTGRYSADAAGGDAAVELTRRCRHAAAAV- 414 (975)
Q Consensus 339 ~v~~-~~~L~V~GG~~~~~~--~~~~~~dv~~yD~~t~~W~~v~~~~~~p~~~~~~~~~~~~~~~~~p~~R~~hsa~~~- 414 (975)
++++ +++|||+||.+.... ......++++||+++++|+.+..+ +.+|..|+++++
T Consensus 461 ~~~l~~g~i~v~GG~~~~~~~~~~~~~~~v~~ydp~t~~W~~~~~~---------------------~~~R~~hs~a~ll 519 (656)
T 1k3i_A 461 SVVLPDGSTFITGGQRRGIPFEDSTPVFTPEIYVPEQDTFYKQNPN---------------------SIVRVYHSISLLL 519 (656)
T ss_dssp EEECTTSCEEEECCBSBCCTTCCCSBCCCCEEEEGGGTEEEECCCC---------------------SSCCCTTEEEEEC
T ss_pred eEECCCCCEEEECCcccCcCcCCCCcccceEEEcCCCCceeecCCC---------------------CCccccccHhhcC
Confidence 9888 999999999763210 113468899999999999998776 569999999988
Q ss_pred -CCEEEEEcCCC
Q 002047 415 -GDLIFIYGGLR 425 (975)
Q Consensus 415 -~~~LyV~GG~~ 425 (975)
+++|||+||..
T Consensus 520 ~dg~v~v~GG~~ 531 (656)
T 1k3i_A 520 PDGRVFNGGGGL 531 (656)
T ss_dssp TTSCEEEEECCC
T ss_pred CCcEEEecCCCC
Confidence 99999999953
No 27
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=99.95 E-value=3e-27 Score=291.04 Aligned_cols=232 Identities=16% Similarity=0.231 Sum_probs=190.9
Q ss_pred CCCCccceEEEEeCCEEEEEeccCCCCCccccEEEEEcCCCCCcEEEEE-e--cCCCCCCCcccEEEEe--CCcEEEEEc
Q 002047 171 PPTPRAAHVATAVGTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVV-V--QGPGPGPRYGHVMALV--GQRYLMAIG 245 (975)
Q Consensus 171 ~P~pR~~hsa~~~~~~iyv~GG~~~~~~~~~dv~~yD~~t~~~~W~~v~-~--~g~~P~~R~~h~~~~~--~~~~lyV~G 245 (975)
.|.+|++|++ +++++|||+||.+. ...+++|+||+.+++ |+.++ . .+.+|.+|++|+++++ ++ +|||+|
T Consensus 385 ~p~rr~g~~~-~~~~~iyv~GG~~~--~~~~~v~~yd~~~~~--W~~~~~~~p~~~~p~~R~~hs~~~~~~~~-~lyv~G 458 (695)
T 2zwa_A 385 PINRKFGDVD-VAGNDVFYMGGSNP--YRVNEILQLSIHYDK--IDMKNIEVSSSEVPVARMCHTFTTISRNN-QLLLIG 458 (695)
T ss_dssp TTCCBSCEEE-ECSSCEEEECCBSS--SBCCCEEEEEECSSC--EEEEECCCCCSCCCCCCBSCEEEEETTTT-EEEEEC
T ss_pred CCCCceeEEE-EECCEEEEECCCCC--CCcCcEEEEECCCCe--EEEeccCCCCCCCCccccceEEEEEccCC-EEEEEc
Confidence 3666666544 48999999999866 668999999999975 99998 3 4679999999999999 66 899999
Q ss_pred CCCCCC-CCCcEEEEECCCCCcEEEEccCCCCCCCCcceeEEEEEeCCeEEEecCCCCCCCCccceEEeecCCCCeEEEE
Q 002047 246 GNDGKR-PLADVWALDTAAKPYEWRKLEPEGEGPPPCMYATASARSDGLLLLCGGRDASSVPLASAYGLAKHRDGRWEWA 324 (975)
Q Consensus 246 G~~g~~-~~ndv~~yDl~s~~~~W~~v~~~~~~P~~r~~~~a~~~~~g~lyvfGG~~~~~~~l~d~~~~~~~~~~~W~w~ 324 (975)
|.++.. .++++|+||+.++ +|+.+.++ |.+|..|+++++.+++||||||.+... +++.|++.++ +|.
T Consensus 459 G~~~~~~~~~dv~~yd~~t~--~W~~~~~~---p~~R~~h~~~~~~~~~iyv~GG~~~~~----~v~~yd~~t~---~W~ 526 (695)
T 2zwa_A 459 GRKAPHQGLSDNWIFDMKTR--EWSMIKSL---SHTRFRHSACSLPDGNVLILGGVTEGP----AMLLYNVTEE---IFK 526 (695)
T ss_dssp CBSSTTCBCCCCEEEETTTT--EEEECCCC---SBCCBSCEEEECTTSCEEEECCBCSSC----SEEEEETTTT---EEE
T ss_pred CCCCCCCccccEEEEeCCCC--cEEECCCC---CCCcccceEEEEcCCEEEEECCCCCCC----CEEEEECCCC---ceE
Confidence 998754 7999999999999 99999765 445777777665699999999987655 8999988876 555
Q ss_pred ECCC--CCCCCcceeeEEEeC---CEEEEEcCcCCCCCccccCCcEEEEECCCCe------EEEcccCcCCCCCCCCccc
Q 002047 325 IAPG--VSPSPRYQHAAVFVN---ARLHVSGGALGGGRMVEDSSSVAVLDTAAGV------WCDTKSVVTSPRTGRYSAD 393 (975)
Q Consensus 325 ~~~g--~~P~~R~~hs~v~~~---~~L~V~GG~~~~~~~~~~~~dv~~yD~~t~~------W~~v~~~~~~p~~~~~~~~ 393 (975)
.+.. ..|.+|.+|++++++ ++|||+||....+. ...+++|+||+.+++ |+.+..++
T Consensus 527 ~~~~~g~~p~~r~~~~a~v~~~~~~~iyv~GG~~~~~~--~~~~~v~~yd~~~~~w~~~~~W~~~~~~p----------- 593 (695)
T 2zwa_A 527 DVTPKDEFFQNSLVSAGLEFDPVSKQGIILGGGFMDQT--TVSDKAIIFKYDAENATEPITVIKKLQHP----------- 593 (695)
T ss_dssp ECCCSSGGGGSCCBSCEEEEETTTTEEEEECCBCTTSS--CBCCEEEEEEECTTCSSCCEEEEEEEECG-----------
T ss_pred EccCCCCCCCcccceeEEEEeCCCCEEEEECCcCCCCC--eeeCcEEEEEccCCccccceEEEEcCCCC-----------
Confidence 5553 468899999988877 89999999865432 347899999999999 88887641
Q ss_pred cCCCCCccCCCccceeEEEEEC-CEEEEEcCCCCC---CCccceEeeeccccc
Q 002047 394 AAGGDAAVELTRRCRHAAAAVG-DLIFIYGGLRGG---VLLDDLLVAEDLAAA 442 (975)
Q Consensus 394 ~~~~~~~~~p~~R~~hsa~~~~-~~LyV~GG~~~~---~~l~Dv~~ld~~~~~ 442 (975)
+.+|++|++++++ ++|||+||+++. ..+++++++|.....
T Consensus 594 ---------~~~R~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~v~~yd~~t~~ 637 (695)
T 2zwa_A 594 ---------LFQRYGSQIKYITPRKLLIVGGTSPSGLFDRTNSIISLDPLSET 637 (695)
T ss_dssp ---------GGCCBSCEEEEEETTEEEEECCBCSSCCCCTTTSEEEEETTTTE
T ss_pred ---------CCCcccceEEEeCCCEEEEECCccCCCCCCCCCeEEEEECCCCe
Confidence 3589999999999 999999998755 369999999987544
No 28
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=99.89 E-value=1.9e-22 Score=247.07 Aligned_cols=248 Identities=13% Similarity=0.109 Sum_probs=180.4
Q ss_pred cEEEEECCCCcEEEecCCCCCCCCccceEEEEe--CCEEEEEeccCCCC-----CccccEEEEEcCCCCCcEEEEEecCC
Q 002047 151 DVHCYDVLTNKWSRITPFGEPPTPRAAHVATAV--GTMVVIQGGIGPAG-----LSAEDLHVLDLTQQRPRWHRVVVQGP 223 (975)
Q Consensus 151 dv~~yD~~t~~W~~l~~~g~~P~pR~~hsa~~~--~~~iyv~GG~~~~~-----~~~~dv~~yD~~t~~~~W~~v~~~g~ 223 (975)
++..||+.+++|+.+.++ ||..|+++++ +++||++||..... ....++++||+.+++ |+.+. .
T Consensus 167 ~~~~~dp~~~~W~~~~~~-----P~~~~~~av~~~~g~l~v~GG~~~~~~~~~~~~~~~~~~yd~~t~~--w~~~~---~ 236 (656)
T 1k3i_A 167 SYTAPQPGLGRWGPTIDL-----PIVPAAAAIEPTSGRVLMWSSYRNDAFGGSPGGITLTSSWDPSTGI--VSDRT---V 236 (656)
T ss_dssp CCCCCCTTSCEEEEEEEC-----SSCCSEEEEETTTTEEEEEEECCCTTTCSCCCSEEEEEEECTTTCC--BCCCE---E
T ss_pred ccccCCCCCCeeeeeccC-----CCCceeEEEEecCCEEEEEecccccccccCCCCeEEEEEEeCCCCc--EEeCc---c
Confidence 355678889999998754 4566677766 88999999975432 234589999999985 99887 6
Q ss_pred CCCCCcccE--EEEeCCcEEEEEcCCCCCCCCCcEEEEECCCCCcEEEEccCCCCCCCCcceeEEEEEeCCeEEEecCCC
Q 002047 224 GPGPRYGHV--MALVGQRYLMAIGGNDGKRPLADVWALDTAAKPYEWRKLEPEGEGPPPCMYATASARSDGLLLLCGGRD 301 (975)
Q Consensus 224 ~P~~R~~h~--~~~~~~~~lyV~GG~~g~~~~ndv~~yDl~s~~~~W~~v~~~~~~P~~r~~~~a~~~~~g~lyvfGG~~ 301 (975)
+|.+|..|+ ++++.+++|||+||.+.. ++++||+.++ +|+.+.++.. +|.+|++++..+++|||+||..
T Consensus 237 ~~~~~~~~~~~~~~~~~g~lyv~GG~~~~----~v~~yd~~t~--~W~~~~~~~~---~R~~~s~~~~~dg~iyv~GG~~ 307 (656)
T 1k3i_A 237 TVTKHDMFCPGISMDGNGQIVVTGGNDAK----KTSLYDSSSD--SWIPGPDMQV---ARGYQSSATMSDGRVFTIGGSW 307 (656)
T ss_dssp EECSCCCSSCEEEECTTSCEEEECSSSTT----CEEEEEGGGT--EEEECCCCSS---CCSSCEEEECTTSCEEEECCCC
T ss_pred cCCCCCCccccccCCCCCCEEEeCCCCCC----ceEEecCcCC--ceeECCCCCc---cccccceEEecCCeEEEEeCcc
Confidence 677776654 555555589999998653 7999999999 9999986643 4666666666699999999964
Q ss_pred CCCCCccceEEeecCCCCeEEEEEC---CCCC------------------------------------------------
Q 002047 302 ASSVPLASAYGLAKHRDGRWEWAIA---PGVS------------------------------------------------ 330 (975)
Q Consensus 302 ~~~~~l~d~~~~~~~~~~~W~w~~~---~g~~------------------------------------------------ 330 (975)
.....+++++.|++.++ +|+.... .+++
T Consensus 308 ~~~~~~~~~e~yd~~t~-~W~~~~~~~~~p~~~~~~~~~~~~~~~iyv~Gg~~g~~~~~~~~~~v~~yd~~~~~w~~~~~ 386 (656)
T 1k3i_A 308 SGGVFEKNGEVYSPSSK-TWTSLPNAKVNPMLTADKQGLYRSDNHAWLFGWKKGSVFQAGPSTAMNWYYTSGSGDVKSAG 386 (656)
T ss_dssp CSSSCCCCEEEEETTTT-EEEEETTSCSGGGCCCCTTGGGTTTCSCCEEECGGGCEEECCSSSEEEEEECSTTCEEEEEE
T ss_pred cCCcccccceEeCCCCC-cceeCCCccccccccccccceeecCCceEEEECCCCcEEEecCccceeeeecCCcceeecCC
Confidence 44447889999988766 4544311 1110
Q ss_pred --------CCCcceeeEEE---eCCEEEEEcCcCCCCCccccCC---cEEEEECCCCeEEEcc--cCcCCCCCCCCcccc
Q 002047 331 --------PSPRYQHAAVF---VNARLHVSGGALGGGRMVEDSS---SVAVLDTAAGVWCDTK--SVVTSPRTGRYSADA 394 (975)
Q Consensus 331 --------P~~R~~hs~v~---~~~~L~V~GG~~~~~~~~~~~~---dv~~yD~~t~~W~~v~--~~~~~p~~~~~~~~~ 394 (975)
+.++..++++. ++++|||+||...... ....+ .+++||+.+++|..+. .+
T Consensus 387 ~~~~~~~~~~~~~~~~av~~~~~~~~i~v~GG~~~~~~-~~~~~~~~~v~~yd~~~~~W~~~~~~~m------------- 452 (656)
T 1k3i_A 387 KRQSNRGVAPDAMCGNAVMYDAVKGKILTFGGSPDYQD-SDATTNAHIITLGEPGTSPNTVFASNGL------------- 452 (656)
T ss_dssp ECEETTEECCCCBTCEEEEEETTTTEEEEECCBSSSSS-SBCCCCEEEEECCSTTSCCEEEECTTCC-------------
T ss_pred ccccccccCCCCCCCceEeccCCCCeEEEEeCCCCCCC-CCcCCcceEEEcCCCCCCCeeEEccCCC-------------
Confidence 00122344443 4899999999753211 11234 7999999999999886 44
Q ss_pred CCCCCccCCCccceeEEEEE-CCEEEEEcCCCC------CCCccceEeeeccc
Q 002047 395 AGGDAAVELTRRCRHAAAAV-GDLIFIYGGLRG------GVLLDDLLVAEDLA 440 (975)
Q Consensus 395 ~~~~~~~~p~~R~~hsa~~~-~~~LyV~GG~~~------~~~l~Dv~~ld~~~ 440 (975)
|.+|..|+++++ +++|||+||.+. ...+++++++|...
T Consensus 453 --------p~~R~~~~~~~l~~g~i~v~GG~~~~~~~~~~~~~~~v~~ydp~t 497 (656)
T 1k3i_A 453 --------YFARTFHTSVVLPDGSTFITGGQRRGIPFEDSTPVFTPEIYVPEQ 497 (656)
T ss_dssp --------SSCCBSCEEEECTTSCEEEECCBSBCCTTCCCSBCCCCEEEEGGG
T ss_pred --------CCCcccCCeEECCCCCEEEECCcccCcCcCCCCcccceEEEcCCC
Confidence 669999999998 999999999653 35688999999754
No 29
>2qjc_A Diadenosine tetraphosphatase, putative; putative diadenosine tetraphosphatase, monomer, PSI- 2, protein structure initiative, nysgrc; 2.05A {Trypanosoma brucei}
Probab=99.88 E-value=4.9e-23 Score=223.24 Aligned_cols=186 Identities=19% Similarity=0.321 Sum_probs=127.1
Q ss_pred HHHhcCCCeeeecCCEEEEecCCCCHHHHHHHHHHhCCCCC-CCCccceeEEEeccccCCCCChHHHHHHHHHhhhcCCC
Q 002047 685 RIFSSEPSVLQLKAPIKIFGDLHGQFGDLMRLFDEYGSPST-AGDIAYIDYLFLGDYVDRGQHSLETITLLLALKVEYPN 763 (975)
Q Consensus 685 ~~~~~ep~~l~l~~~i~vvGDiHG~~~~L~~ll~~~g~~~~-~~~~~~~~~vfLGDyVDRG~~s~evl~ll~~lk~~~P~ 763 (975)
.+|.+++.++++.++|+|||||||++.+|.++|+.++.... + .+||+|||||||+++.|++.+|..+
T Consensus 6 ~~~~~~~~l~~~~~~i~visDiHg~~~~l~~~l~~~~~~~~~d------~ii~~GD~vd~g~~~~~~l~~l~~~------ 73 (262)
T 2qjc_A 6 QGYANVVTLPNVTGRVIIVGDIHGCRAQLEDLLRAVSFKQGSD------TLVAVGDLVNKGPDSFGVVRLLKRL------ 73 (262)
T ss_dssp --CCCEEECTTCCSCEEEECCCTTCHHHHHHHHHHHTCCTTTS------EEEECSCCSSSSSCHHHHHHHHHHH------
T ss_pred cccCChhhhcCCCCeEEEEeCCCCCHHHHHHHHHHHhccCCCC------EEEEecCCCCCCCCHHHHHHHHHHC------
Confidence 35788999999999999999999999999999999987653 3 7999999999999999999998864
Q ss_pred CEEEEeccccccchhhhcCChHH-HHHHhCCccc-----chhhhhhhccccccceEEEEc-ceEEEecCCccCccc----
Q 002047 764 NVHLIRGNHEAADINALFGFRIE-CIERMGERDG-----IWAWHRINRLFNWLPLAALIE-KKIICMHGGIGRSIN---- 832 (975)
Q Consensus 764 ~v~llrGNHE~~~~~~~~gf~~e-~~~~~g~~~~-----~~~~~~~~~~f~~LPlaa~i~-~~il~vHgGi~~~~~---- 832 (975)
.+++|+||||...++..+++..+ +..+++.... ..+.....++|+.||+++.++ ++++|||||++|.+.
T Consensus 74 ~~~~v~GNHd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~lP~~~~i~~~~i~~vHgg~~p~~~~~~~ 153 (262)
T 2qjc_A 74 GAYSVLGNHDAKLLKLVKKLGKKECLKGRDAKSSLAPLAQSIPTDVETYLSQLPHIIRIPAHNVMVAHAGLHPQRPVDRQ 153 (262)
T ss_dssp TCEECCCHHHHHHHHHHHCC-------------CHHHHHHHCCHHHHHHHHTCCSEEEEGGGTEEEESSCCCTTSCGGGC
T ss_pred CCEEEeCcChHHHHhhhcCCCccccccccchHHHHHHHHhhhhHHHHHHHHcCCcEEEECCCcEEEEECCCCCCCCcccC
Confidence 59999999999998888887654 3444443211 123455667888899998886 599999999988653
Q ss_pred CHhhhhhccCCcc---cCCCCcceeccccCCCCCCCCCCCcccCCCCCceeeeCHHH
Q 002047 833 HVEQIENLQRPIT---MEAGSIVLMDLLWSDPTENDSVEGLRPNARGPGLVTFGPDR 886 (975)
Q Consensus 833 ~~~~i~~i~rp~~---~~~~~~~~~dllWsdP~~~~~~~~~~~n~rg~~~~~fg~~~ 886 (975)
..+++..+.+... .+..+ ..++|+||... ....|..+.||...++||+..
T Consensus 154 ~~~~l~~ir~~~~~~~~~~~G---~~~~~~d~~~~-~~~~w~~~~~g~~~vvfGHt~ 206 (262)
T 2qjc_A 154 YEDEVTTMRNLIEKEQEATGG---VTLTATEETND-GGKPWASMWRGPETVVFGHDA 206 (262)
T ss_dssp CHHHHHHCCEEEEC----------CCEEEESCSTT-CCEEGGGGCCCSSEEEECCCG
T ss_pred CHHHHhhhhhcccccccCCCC---ccccccCCCCc-CCCChhhccCCCCEEEECCCc
Confidence 2333333332211 11111 14789998532 244566666655544455443
No 30
>1g5b_A Serine/threonine protein phosphatase; bacteriophage lambda, Ser/Thr protein phosphatase, ppase, manganese, sulfate, viral protein; 2.15A {Enterobacteria phage lambda} SCOP: d.159.1.3
Probab=99.76 E-value=7e-20 Score=193.47 Aligned_cols=122 Identities=27% Similarity=0.324 Sum_probs=92.9
Q ss_pred CCEEEEecCCCCHHHHHHHHHHhCCCCCCCCccceeEEEeccccCCCCChHHHHHHHHHhhhcCCCCEEEEeccccccch
Q 002047 698 APIKIFGDLHGQFGDLMRLFDEYGSPSTAGDIAYIDYLFLGDYVDRGQHSLETITLLLALKVEYPNNVHLIRGNHEAADI 777 (975)
Q Consensus 698 ~~i~vvGDiHG~~~~L~~ll~~~g~~~~~~~~~~~~~vfLGDyVDRG~~s~evl~ll~~lk~~~P~~v~llrGNHE~~~~ 777 (975)
++|+|||||||++.+|.++|+.++..+..+ .+||+|||||||+++.|++.+|.. ..+++|+||||...+
T Consensus 13 ~~i~visDiHg~~~~l~~~l~~~~~~~~~d-----~~i~~GD~~~~g~~~~~~~~~l~~------~~~~~v~GNhd~~~~ 81 (221)
T 1g5b_A 13 RNIWVVGDLHGCYTNLMNKLDTIGFDNKKD-----LLISVGDLVDRGAENVECLELITF------PWFRAVRGNHEQMMI 81 (221)
T ss_dssp SCEEEECCCTTCHHHHHHHHHHHTCCTTTC-----EEEECSCCSSSSSCHHHHHGGGGS------TTEEECCCHHHHHHH
T ss_pred ceEEEEEcCCCCHHHHHHHHHHccCCCCCC-----EEEEeCCccCCCCChHHHHHHHhc------CCEEEEccCcHHHHH
Confidence 689999999999999999999998753221 789999999999999999988754 379999999999887
Q ss_pred hhhcCChHH-HHHHhCCc-------ccchhhhhhhccccccceEEEE---cceEEEecCCccCc
Q 002047 778 NALFGFRIE-CIERMGER-------DGIWAWHRINRLFNWLPLAALI---EKKIICMHGGIGRS 830 (975)
Q Consensus 778 ~~~~gf~~e-~~~~~g~~-------~~~~~~~~~~~~f~~LPlaa~i---~~~il~vHgGi~~~ 830 (975)
+..+++... .+...+.. ....++..+.++|+.||+++.+ +.+++|||||+++.
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~lP~~~~~~~~~~~i~~vHgg~~~~ 145 (221)
T 1g5b_A 82 DGLSERGNVNHWLLNGGGWFFNLDYDKEILAKALAHKADELPLIIELVSKDKKYVICHADYPFD 145 (221)
T ss_dssp HHHSTTCCCHHHHTTTGGGGGGSCHHHHHHHHHHHHHHTTCCSEEEEEETTEEEEECSSCCCSS
T ss_pred hhhccCCcHHHHHHcCCCchhhcCHHHHHHHHHHHHHHHhCCcEEEEEecCCeEEEEecCCChh
Confidence 655433211 11111211 1123456778899999999877 57999999999764
No 31
>3rqz_A Metallophosphoesterase; PSI-biology, midwest center for structural genomics, MCSG, Zn binding, hydrolase; 1.95A {Sphaerobacter thermophilus} SCOP: d.159.1.0
Probab=99.45 E-value=2.4e-13 Score=145.67 Aligned_cols=188 Identities=19% Similarity=0.154 Sum_probs=125.8
Q ss_pred cCCEEEEecCCCCHHHHHHHHHHhCCCCCCCCccceeEEEeccccCCCCChHHHHHHHHHhhhcCCCCEEEEeccccccc
Q 002047 697 KAPIKIFGDLHGQFGDLMRLFDEYGSPSTAGDIAYIDYLFLGDYVDRGQHSLETITLLLALKVEYPNNVHLIRGNHEAAD 776 (975)
Q Consensus 697 ~~~i~vvGDiHG~~~~L~~ll~~~g~~~~~~~~~~~~~vfLGDyVDRG~~s~evl~ll~~lk~~~P~~v~llrGNHE~~~ 776 (975)
.++|.+||||||++.+|.++++.+. ..+ .+|++||++|+|+++.|++.+|..++ .+++++||||...
T Consensus 3 ~mri~~isDiHg~~~~l~~~l~~~~--~~d------~ii~~GDl~~~g~~~~~~~~~l~~~~-----~~~~v~GNhD~~~ 69 (246)
T 3rqz_A 3 AMRILIISDVHANLVALEAVLSDAG--RVD------DIWSLGDIVGYGPRPRECVELVRVLA-----PNISVIGNHDWAC 69 (246)
T ss_dssp CCCEEEECCCTTCHHHHHHHHHHHC--SCS------EEEECSCCSSSSSCHHHHHHHHHHHC-----SSEECCCHHHHHH
T ss_pred CcEEEEEeecCCCHHHHHHHHHhcc--CCC------EEEECCCcCCCCCCHHHHHHHHHhcC-----CCEEEeCchHHHH
Confidence 3689999999999999999999987 222 79999999999999999999999884 3799999999987
Q ss_pred hhhhcC--Ch---HHHHHHhCCcccchhhhhhhccccccceEEEEcceEEEecCCccCcccCHhhhhhccCCcccCCCCc
Q 002047 777 INALFG--FR---IECIERMGERDGIWAWHRINRLFNWLPLAALIEKKIICMHGGIGRSINHVEQIENLQRPITMEAGSI 851 (975)
Q Consensus 777 ~~~~~g--f~---~e~~~~~g~~~~~~~~~~~~~~f~~LPlaa~i~~~il~vHgGi~~~~~~~~~i~~i~rp~~~~~~~~ 851 (975)
...... +. .+.... ....+.....+++..||.....+ +++++||++....
T Consensus 70 ~~~~~~~~~~~~~~~~~~~----~~~~l~~~~~~~L~~lp~~~~~~-~i~~~Hg~p~~~~-------------------- 124 (246)
T 3rqz_A 70 IGRLSLDEFNPVARFASYW----TTMQLQAEHLQYLESLPNRMIDG-DWTVVHGSPRHPI-------------------- 124 (246)
T ss_dssp TCCCCCC--CGGGGCHHHH----HHHHCCHHHHHHHHHCCSEEEET-TEEEESSCSSSTT--------------------
T ss_pred hccCCccccCHHHHHHHHH----HHHHcCHHHHHHHHhCCcEEEEC-CEEEEECCcCCcc--------------------
Confidence 653322 10 000000 01123345567788899987655 8999999864310
Q ss_pred ceeccccCCCCCCCCCCCcccCCCCCceeeeCHHHHHHHHHHcCCeEEEEeccccccceEE-------------------
Q 002047 852 VLMDLLWSDPTENDSVEGLRPNARGPGLVTFGPDRVMEFCNNNDLQLIVRAHECVMDGFER------------------- 912 (975)
Q Consensus 852 ~~~dllWsdP~~~~~~~~~~~n~rg~~~~~fg~~~~~~fl~~~~l~~iiR~H~~~~~G~~~------------------- 912 (975)
| . +.+....+.+.++..+.+++|-||.-.+.-+..
T Consensus 125 ------~----~----------------~~~~~~~~~~~l~~~~~~l~i~GHtH~p~~~~~~~~~~~~~~~~~~~~~~~~ 178 (246)
T 3rqz_A 125 ------W----E----------------YIYNARIAALNFPAFDTPLCFVGHTHVPLYIREDEALSNVAPHHPNDGEVLD 178 (246)
T ss_dssp ------T----C----------------CCCSHHHHHHHGGGCCSSEEECCSSSSEEEEEHHHHHTTCCCBCCCTTCEEE
T ss_pred ------c----c----------------ccCChHHHHHHHhccCCCEEEECCcCcccEEEecccccccccccccccceee
Confidence 0 0 122345666777888999999999876544431
Q ss_pred -ecCCeEEEEeccccccCCCCCcEEEEEEcCC-ceEEeE
Q 002047 913 -FAQGHLITLFSATNYCGTANNAGAILVLGRD-LVVVPK 949 (975)
Q Consensus 913 -~~~~~~iTvfSa~~y~~~~~n~ga~l~i~~~-~~~~~~ 949 (975)
..+..+|..-|.-.-- ...+.+++++++.+ ..++++
T Consensus 179 l~~g~~ivNpGSVG~Pr-dg~p~A~Y~i~d~~~~~v~~~ 216 (246)
T 3rqz_A 179 VSSGRYIINPGAVGQPR-DGDPRASYAIFEPDAQRVTFH 216 (246)
T ss_dssp CSSSCEEEEECCSSCCC-SSCCSEEEEEEEGGGTEEEEE
T ss_pred cCCCeEEEECCccCCCC-CcCCcceEEEEECCCCEEEEE
Confidence 1134555655542221 13457788888654 344443
No 32
>1nnw_A Hypothetical protein; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics, secsg; 1.90A {Pyrococcus furiosus} SCOP: d.159.1.5 PDB: 2gju_A
Probab=99.39 E-value=3e-12 Score=137.32 Aligned_cols=199 Identities=11% Similarity=0.040 Sum_probs=121.0
Q ss_pred CCEEEEecCCCCHHHHHHHHHHhC---CC--CCCCCccceeEEEeccccCCCCChHHHHHHHHHhhhcCCCCEEEEeccc
Q 002047 698 APIKIFGDLHGQFGDLMRLFDEYG---SP--STAGDIAYIDYLFLGDYVDRGQHSLETITLLLALKVEYPNNVHLIRGNH 772 (975)
Q Consensus 698 ~~i~vvGDiHG~~~~L~~ll~~~g---~~--~~~~~~~~~~~vfLGDyVDRG~~s~evl~ll~~lk~~~P~~v~llrGNH 772 (975)
++|++||||||++..|.++++.+. .. ..+ .+|++||++|+|+.+.|++.+|..|+... .+++++|||
T Consensus 2 m~i~~isD~H~~~~~l~~~l~~~~~~~~~~~~~d------~ii~~GD~~~~g~~~~~~~~~l~~l~~~~--~~~~v~GNh 73 (252)
T 1nnw_A 2 VYVAVLANIAGNLPALTAALSRIEEMREEGYEIE------KYYILGNIVGLFPYPKEVIEVIKDLTKKE--NVKIIRGKY 73 (252)
T ss_dssp CEEEEEECCTTCHHHHHHHHHHHHHHHHTTCCEE------EEEEESCSSSSSSCHHHHHHHHHHHHHHS--CEEEECCHH
T ss_pred cEEEEEeecCCCHHHHHHHHHHHHhhhhccCCCC------EEEEeCccCCCCCCHHHHHHHHHhhHhhc--CeeEEecch
Confidence 579999999999999999998775 32 122 68999999999999999999999987543 499999999
Q ss_pred cccchhhhcCCh-----------HHHHHHhCCcccchhhhhhhccccccceEEEE--cc-eEEEecCCccCcccCHhhhh
Q 002047 773 EAADINALFGFR-----------IECIERMGERDGIWAWHRINRLFNWLPLAALI--EK-KIICMHGGIGRSINHVEQIE 838 (975)
Q Consensus 773 E~~~~~~~~gf~-----------~e~~~~~g~~~~~~~~~~~~~~f~~LPlaa~i--~~-~il~vHgGi~~~~~~~~~i~ 838 (975)
|.........+. ......+ ......+-....+++..||....+ ++ +++++||++....
T Consensus 74 D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~~~~~~L~~lp~~~~~~~~~~~i~~~H~~p~~~~------- 145 (252)
T 1nnw_A 74 DQIIAMSDPHATDPGYIDKLELPGHVKKAL-KFTWEKLGHEGREYLRDLPIYLVDKIGGNEVFGVYGSPINPF------- 145 (252)
T ss_dssp HHHHHHSCTTCSSSGGGGGSSCCHHHHHHH-HHHHHHHHHHHHHHHHTSCSCEEEEETTEEEEEESSCSSCTT-------
T ss_pred HHHhhccccccCCcccccchhhhHHHHHHH-HHHHHHCCHHHHHHHHhCCceEEEeeCCcEEEEEcCCCCCCc-------
Confidence 987654321110 0000000 000011223445677788876554 33 8999999872110
Q ss_pred hccCCcccCCCCcceeccccCCCCCCCCCCCcccCCCCCceeeeCHHHHHHHHHHc-CCeEEEEeccccccceEEecCCe
Q 002047 839 NLQRPITMEAGSIVLMDLLWSDPTENDSVEGLRPNARGPGLVTFGPDRVMEFCNNN-DLQLIVRAHECVMDGFERFAQGH 917 (975)
Q Consensus 839 ~i~rp~~~~~~~~~~~dllWsdP~~~~~~~~~~~n~rg~~~~~fg~~~~~~fl~~~-~l~~iiR~H~~~~~G~~~~~~~~ 917 (975)
. +.+| + + -+.+.+.++++.. +.+++|-||.-+...... ++.
T Consensus 146 ----------~-----~~~~--~-----------~--------~~~~~l~~~~~~~~~~~~vi~GHtH~~~~~~~--~~~ 187 (252)
T 1nnw_A 146 ----------D-----GEVL--A-----------E--------QPTSYYEAIMRPVKDYEMLIVASPMYPVDAMT--RYG 187 (252)
T ss_dssp ----------T-----CCCC--S-----------S--------CCHHHHHHHHGGGTTSSEEEESTTCSEEEEEE--TTE
T ss_pred ----------c-----cccC--C-----------C--------CCHHHHHHHHhcCCCCCEEEECCccccceEec--CCe
Confidence 0 0011 0 0 1235677788887 999999999987655433 454
Q ss_pred E-EEEeccccccCCCCCcEEEEEEcC-CceEEeEEe
Q 002047 918 L-ITLFSATNYCGTANNAGAILVLGR-DLVVVPKLI 951 (975)
Q Consensus 918 ~-iTvfSa~~y~~~~~n~ga~l~i~~-~~~~~~~~~ 951 (975)
+ |..=|. .+.-.....+++++++- +..+.++.+
T Consensus 188 ~~in~Gs~-~~~~~~~~~~~y~il~~~~~~v~~~~v 222 (252)
T 1nnw_A 188 RVVCPGSV-GFPPGKEHKATFALVDVDTLKPKFIEV 222 (252)
T ss_dssp EEEEECCS-SSCSSSSCCEEEEEEETTTCCEEEEEE
T ss_pred EEEECCCc-cCCCCCCCcceEEEEECCCCeEEEEEe
Confidence 3 232222 11111122566666654 344554433
No 33
>3qfm_A SAPH, putative uncharacterized protein; sandwich fold, asymmetric AP4A hydrolase, phosphodiesterase, binding, Mn2+ binding, hydrolase; 1.90A {Streptococcus pneumoniae} PDB: 3qfn_A 3qfo_A*
Probab=99.37 E-value=1.9e-12 Score=140.58 Aligned_cols=118 Identities=16% Similarity=0.086 Sum_probs=86.1
Q ss_pred CEEEEecCCCCHHHHHHHHHHhCCCCCCCCccceeEEEeccccCCCCChHHHHHHHHHhhhcCCCCEEEEeccccccchh
Q 002047 699 PIKIFGDLHGQFGDLMRLFDEYGSPSTAGDIAYIDYLFLGDYVDRGQHSLETITLLLALKVEYPNNVHLIRGNHEAADIN 778 (975)
Q Consensus 699 ~i~vvGDiHG~~~~L~~ll~~~g~~~~~~~~~~~~~vfLGDyVDRG~~s~evl~ll~~lk~~~P~~v~llrGNHE~~~~~ 778 (975)
+|.||+||||++..|.++|+.+.....+ .+||+||+|++|+++.||+.+|.+++ .+++|+||||...++
T Consensus 13 ~i~~iSDiHg~~~~l~~vl~~~~~~~~D------~ii~~GDlv~~g~~~~~~~~~l~~~~-----~~~~v~GNhD~~~~~ 81 (270)
T 3qfm_A 13 KIALLSDIHGNTTALEAVLADARQLGVD------EYWLLGDILMPGTGRRRILDLLDQLP-----ITARVLGNWEDSLWH 81 (270)
T ss_dssp EEEEECCCTTCHHHHHHHHHHHHHTTCC------EEEECSCCSSSSSCSHHHHHHHHTSC-----EEEECCCHHHHHHHH
T ss_pred EEEEEecCCCCHHHHHHHHHHHHhcCCC------EEEEcCCCCCCCCCHHHHHHHHHccC-----CEEEEcCChHHHHHH
Confidence 6899999999999999999988644333 79999999999999999999998872 589999999998776
Q ss_pred hhc---CChHHHHHHhC---CcccchhhhhhhccccccceEEEE--c-ceEEEecCCc
Q 002047 779 ALF---GFRIECIERMG---ERDGIWAWHRINRLFNWLPLAALI--E-KKIICMHGGI 827 (975)
Q Consensus 779 ~~~---gf~~e~~~~~g---~~~~~~~~~~~~~~f~~LPlaa~i--~-~~il~vHgGi 827 (975)
... +|.......+. ......+.....+++..||....+ + .+++++||-.
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~~~~L~~LP~~~~~~~~g~~i~lvHg~p 139 (270)
T 3qfm_A 82 GVRKELDSTRPSQRYLLRQCQYVLEEISLEEIEVLHNQPLQIHRQFGDLTVGISHHLP 139 (270)
T ss_dssp HHTTCSCTTSHHHHHHHHHHHHHHTTSCHHHHHHHHSCCSEEEEEETTEEEEEESSBT
T ss_pred hhccccCCCcHHHHHHHHHHHHHHHHcCHHHHHHHHhCCCceEEEECCcEEEEEECCC
Confidence 433 33322111110 001122345667888999998755 3 4899999654
No 34
>1su1_A Hypothetical protein YFCE; structural genomics, phosphoesterase, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 2.25A {Escherichia coli} SCOP: d.159.1.7
Probab=98.69 E-value=2.6e-08 Score=103.60 Aligned_cols=69 Identities=19% Similarity=0.374 Sum_probs=56.8
Q ss_pred CCEEEEecCCCCHHHHHHHHHHhCCCCCCCCccceeEEEeccccCCCC--------ChHHHHHHHHHhhhcCCCCEEEEe
Q 002047 698 APIKIFGDLHGQFGDLMRLFDEYGSPSTAGDIAYIDYLFLGDYVDRGQ--------HSLETITLLLALKVEYPNNVHLIR 769 (975)
Q Consensus 698 ~~i~vvGDiHG~~~~L~~ll~~~g~~~~~~~~~~~~~vfLGDyVDRG~--------~s~evl~ll~~lk~~~P~~v~llr 769 (975)
+++.+++|+||++..|.++++.+.....+ .+|++||++|+|+ ...+++.+|.+++ ..+++++
T Consensus 26 mki~~iSD~H~~~~~l~~~l~~~~~~~~d------~vi~~GDl~~~g~~~~~~~~~~~~~~~~~l~~~~----~~v~~V~ 95 (208)
T 1su1_A 26 MKLMFASDIHGSLPATERVLELFAQSGAQ------WLVILGDVLNHGPRNALPEGYAPAKVVERLNEVA----HKVIAVR 95 (208)
T ss_dssp CEEEEECCCTTBHHHHHHHHHHHHHHTCS------EEEECSCCSCCCTTSCCCTTBCHHHHHHHHHTTG----GGEEECC
T ss_pred EEEEEEEcCCCCHHHHHHHHHHHHhcCCC------EEEECCCccccCcccccccccCHHHHHHHHHhcC----CceEEEE
Confidence 68999999999999999998876422222 7899999999998 4688999888775 3699999
Q ss_pred ccccccc
Q 002047 770 GNHEAAD 776 (975)
Q Consensus 770 GNHE~~~ 776 (975)
||||...
T Consensus 96 GNHD~~~ 102 (208)
T 1su1_A 96 GNCDSEV 102 (208)
T ss_dssp CTTCCHH
T ss_pred CCCchHH
Confidence 9999854
No 35
>1s3l_A Hypothetical protein MJ0936; phosphodiesterase, nuclease, structural genomics, BSGC struc funded by NIH; 2.40A {Methanocaldococcus jannaschii} SCOP: d.159.1.7 PDB: 1s3m_A 1s3n_A 2ahd_A
Probab=98.66 E-value=2.4e-07 Score=94.91 Aligned_cols=65 Identities=18% Similarity=0.323 Sum_probs=50.7
Q ss_pred CCEEEEecCCCCHHHHHHHHHHhCCCCCCCCccceeEEEeccccCCCCChHHHHHHHHHhhhcCCCCEEEEeccccccch
Q 002047 698 APIKIFGDLHGQFGDLMRLFDEYGSPSTAGDIAYIDYLFLGDYVDRGQHSLETITLLLALKVEYPNNVHLIRGNHEAADI 777 (975)
Q Consensus 698 ~~i~vvGDiHG~~~~L~~ll~~~g~~~~~~~~~~~~~vfLGDyVDRG~~s~evl~ll~~lk~~~P~~v~llrGNHE~~~~ 777 (975)
+++.+++|+||++..|.++++.+.....+ .+|++||++|. +++.+|.++ +..+++++||||....
T Consensus 26 m~i~~iSD~Hg~~~~l~~~l~~~~~~~~D------~ii~~GDl~~~-----~~~~~l~~l----~~~~~~V~GNhD~~~~ 90 (190)
T 1s3l_A 26 MKIGIMSDTHDHLPNIRKAIEIFNDENVE------TVIHCGDFVSL-----FVIKEFENL----NANIIATYGNNDGERC 90 (190)
T ss_dssp CEEEEECCCTTCHHHHHHHHHHHHHSCCS------EEEECSCCCST-----HHHHHGGGC----SSEEEEECCTTCCCHH
T ss_pred eEEEEEeeCCCCHHHHHHHHHHHhhcCCC------EEEECCCCCCH-----HHHHHHHhc----CCCEEEEeCCCcchHH
Confidence 68999999999999999999887432222 68899999984 566666543 3469999999998654
No 36
>1uf3_A Hypothetical protein TT1561; metallo-dependent phosphatases, structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.10A {Thermus thermophilus} SCOP: d.159.1.6
Probab=98.62 E-value=4.2e-07 Score=94.88 Aligned_cols=74 Identities=11% Similarity=0.118 Sum_probs=54.9
Q ss_pred cCCEEEEecCCCCHHHHHHHHHHhCCCCCCCCccceeEEEeccccCCCCChHHHHHHHHHhhhcCCCCEEEEeccccccc
Q 002047 697 KAPIKIFGDLHGQFGDLMRLFDEYGSPSTAGDIAYIDYLFLGDYVDRGQHSLETITLLLALKVEYPNNVHLIRGNHEAAD 776 (975)
Q Consensus 697 ~~~i~vvGDiHG~~~~L~~ll~~~g~~~~~~~~~~~~~vfLGDyVDRG~~s~evl~ll~~lk~~~P~~v~llrGNHE~~~ 776 (975)
.++|.+++|+|+++..|.++++.+.....+ -+|++||++|+|....++..++-.|+.. +..+++++||||...
T Consensus 5 ~mri~~iSD~H~~~~~~~~~~~~~~~~~~D------~vi~~GDl~~~~~~~~~~~~~~~~l~~~-~~pv~~v~GNHD~~~ 77 (228)
T 1uf3_A 5 VRYILATSNPMGDLEALEKFVKLAPDTGAD------AIALIGNLMPKAAKSRDYAAFFRILSEA-HLPTAYVPGPQDAPI 77 (228)
T ss_dssp CCEEEEEECCTTCHHHHHHHHTHHHHHTCS------EEEEESCSSCTTCCHHHHHHHHHHHGGG-CSCEEEECCTTSCSH
T ss_pred eEEEEEEeeccCCHHHHHHHHHHHhhcCCC------EEEECCCCCCCCCCHHHHHHHHHHHHhc-CCcEEEECCCCCchh
Confidence 468999999999999998888765321122 6889999999997666555555555432 345999999999864
Q ss_pred h
Q 002047 777 I 777 (975)
Q Consensus 777 ~ 777 (975)
.
T Consensus 78 ~ 78 (228)
T 1uf3_A 78 W 78 (228)
T ss_dssp H
T ss_pred H
Confidence 3
No 37
>3ck2_A Conserved uncharacterized protein (predicted phosphoesterase COG0622); structural genomics, predicted phosphodiesterase, PSI-2; HET: SRT; 2.30A {Streptococcus pneumoniae} SCOP: d.159.1.7
Probab=98.41 E-value=1.4e-06 Score=87.75 Aligned_cols=58 Identities=19% Similarity=0.235 Sum_probs=43.4
Q ss_pred CCEEEEecCCCCHHHHHHHHHHhCCCCCCCCccceeEEEeccccCCCCChHHHHHHHHHhhhcCCCCEEEEecccccc
Q 002047 698 APIKIFGDLHGQFGDLMRLFDEYGSPSTAGDIAYIDYLFLGDYVDRGQHSLETITLLLALKVEYPNNVHLIRGNHEAA 775 (975)
Q Consensus 698 ~~i~vvGDiHG~~~~L~~ll~~~g~~~~~~~~~~~~~vfLGDyVDRG~~s~evl~ll~~lk~~~P~~v~llrGNHE~~ 775 (975)
+++.+++|+||++..|.++++.+.. ..+ .++++||+.- +++. .++ ..+++++||||..
T Consensus 7 m~i~~isD~H~~~~~~~~~~~~~~~-~~d------~i~~~GD~~~------~~l~---~l~----~~~~~v~GNhD~~ 64 (176)
T 3ck2_A 7 QTIIVMSDSHGDSLIVEEVRDRYVG-KVD------AVFHNGDSEL------RPDS---PLW----EGIRVVKGNMDFY 64 (176)
T ss_dssp EEEEEECCCTTCHHHHHHHHHHHTT-TSS------EEEECSCCCS------CTTC---GGG----TTEEECCCTTCCS
T ss_pred cEEEEEecCCCCHHHHHHHHHHhhc-CCC------EEEECCCCch------HHHH---hhh----CCeEEecCcccch
Confidence 5799999999999999999998853 222 6889999731 2222 221 2699999999974
No 38
>2a22_A Vacuolar protein sorting 29; alpha-beta-BETA-alpha sandwich, structural genomics, structural genomics consortium, SGC, protein transport; 2.20A {Cryptosporidium parvum} SCOP: d.159.1.7
Probab=98.39 E-value=5.7e-06 Score=86.27 Aligned_cols=120 Identities=22% Similarity=0.342 Sum_probs=79.5
Q ss_pred cCCEEEEecCCCCHH------HHHHHHHHhCCCCCCCCccceeEEEeccccCCCCChHHHHHHHHHhhhcCCCCEEEEec
Q 002047 697 KAPIKIFGDLHGQFG------DLMRLFDEYGSPSTAGDIAYIDYLFLGDYVDRGQHSLETITLLLALKVEYPNNVHLIRG 770 (975)
Q Consensus 697 ~~~i~vvGDiHG~~~------~L~~ll~~~g~~~~~~~~~~~~~vfLGDyVDRG~~s~evl~ll~~lk~~~P~~v~llrG 770 (975)
.++|.+++|+|+++. .|.++++. ...+ .+|++||++| .+++.+|..+. ..+++++|
T Consensus 25 ~m~i~~iSD~H~~~~~~~l~~~l~~~~~~---~~~D------~vi~~GDl~~-----~~~l~~l~~~~----~~v~~V~G 86 (215)
T 2a22_A 25 GDLVLLIGDLKIPYGAKELPSNFRELLAT---DKIN------YVLCTGNVCS-----QEYVEMLKNIT----KNVYIVSG 86 (215)
T ss_dssp CEEEEEECCCCTTTTCSSCCGGGHHHHHC---TTCC------EEEECSCCCC-----HHHHHHHHHHC----SCEEECCC
T ss_pred CcEEEEEecCCCCCChHHHHHHHHHHHhc---CCCC------EEEECCCCCC-----HHHHHHHHHcC----CCEEEecC
Confidence 468999999999863 33333331 1122 6899999998 58888877763 36999999
Q ss_pred cccccchhhhcCChHHHHHHhCCcccchhhhhhhccccccceEEEE--c-ceEEEecCCccCcccCHhhhhhccCCcccC
Q 002047 771 NHEAADINALFGFRIECIERMGERDGIWAWHRINRLFNWLPLAALI--E-KKIICMHGGIGRSINHVEQIENLQRPITME 847 (975)
Q Consensus 771 NHE~~~~~~~~gf~~e~~~~~g~~~~~~~~~~~~~~f~~LPlaa~i--~-~~il~vHgGi~~~~~~~~~i~~i~rp~~~~ 847 (975)
|||....... .+++..||....+ + .+|+++||.... |
T Consensus 87 NHD~~~~~~~-----------------------~~~~~~lp~~~~~~~~~~~i~l~Hg~~~~-------------~---- 126 (215)
T 2a22_A 87 DLDSAIFNPD-----------------------PESNGVFPEYVVVQIGEFKIGLMHGNQVL-------------P---- 126 (215)
T ss_dssp TTCCSCCBCC-----------------------GGGTBCCCSEEEEEETTEEEEEECSTTSS-------------S----
T ss_pred CCcCcccccC-----------------------hhhHhhCCceEEEecCCeEEEEEcCCccC-------------C----
Confidence 9998654310 0123456644332 2 489999986511 0
Q ss_pred CCCcceeccccCCCCCCCCCCCcccCCCCCceeeeCHHHHHHHHHHcCCeEEEEeccccc
Q 002047 848 AGSIVLMDLLWSDPTENDSVEGLRPNARGPGLVTFGPDRVMEFCNNNDLQLIVRAHECVM 907 (975)
Q Consensus 848 ~~~~~~~dllWsdP~~~~~~~~~~~n~rg~~~~~fg~~~~~~fl~~~~l~~iiR~H~~~~ 907 (975)
| .+.+.+.++++..+.+++|-||.-..
T Consensus 127 ----------~-----------------------~~~~~l~~~~~~~~~d~vl~GHtH~~ 153 (215)
T 2a22_A 127 ----------W-----------------------DDPGSLEQWQRRLDCDILVTGHTHKL 153 (215)
T ss_dssp ----------T-----------------------TCHHHHHHHHHHHTCSEEEECSSCCC
T ss_pred ----------C-----------------------CCHHHHHHHHhhcCCCEEEECCcCCC
Confidence 0 13456777888889999999998764
No 39
>2kkn_A Uncharacterized protein; protein phosphatase 2A homologue, structural genomics, PSI- 2, protein structure initiative; NMR {Thermotoga maritima}
Probab=98.37 E-value=1.8e-07 Score=94.79 Aligned_cols=62 Identities=23% Similarity=0.258 Sum_probs=48.8
Q ss_pred CCEEEEecCCC--CHHHHHHHHHHhCCCCCCCCccceeEEEeccccCCCCChHHHHHHHHHhhhcCCCCEEEEecccccc
Q 002047 698 APIKIFGDLHG--QFGDLMRLFDEYGSPSTAGDIAYIDYLFLGDYVDRGQHSLETITLLLALKVEYPNNVHLIRGNHEAA 775 (975)
Q Consensus 698 ~~i~vvGDiHG--~~~~L~~ll~~~g~~~~~~~~~~~~~vfLGDyVDRG~~s~evl~ll~~lk~~~P~~v~llrGNHE~~ 775 (975)
++|.+++|+|| +...|.++++.+. ...+ .+|++||++|+ +++.+|..+. ..+++++||||..
T Consensus 23 mri~~iSD~Hg~~~~~~l~~~l~~~~-~~~D------~ii~~GD~~~~-----~~~~~l~~~~----~~v~~V~GNhD~~ 86 (178)
T 2kkn_A 23 KRFLLISDSHVPVRMASLPDEILNSL-KEYD------GVIGLGDYVDL-----DTVILLEKFS----KEFYGVHGNMDYP 86 (178)
T ss_dssp EEEEEECCCCBTTTTCCCCHHHHHGG-GGCS------EEEESSCBSCH-----HHHHHHHHHT----SSEEECCCSSSCG
T ss_pred eEEEEEecccCCCCHHHHHHHHHHHh-cCCC------EEEECCCCCCH-----HHHHHHHhcC----CCEEEEECCCCcH
Confidence 57999999997 7777888887753 2222 68999999984 7888887763 3699999999975
No 40
>1z2w_A Vacuolar protein sorting 29; VPS29, retromer, phosphatase, manganese, protein transport; 2.00A {Mus musculus} SCOP: d.159.1.7 PDB: 1z2x_A 3lh6_A 3lh7_A 3psn_A 3pso_A 1w24_A 2r17_A
Probab=98.23 E-value=1.1e-05 Score=82.42 Aligned_cols=64 Identities=23% Similarity=0.366 Sum_probs=44.0
Q ss_pred CCEEEEecCCCCHH--HHHHHHHH-hCCCCCCCCccceeEEEeccccCCCCChHHHHHHHHHhhhcCCCCEEEEeccccc
Q 002047 698 APIKIFGDLHGQFG--DLMRLFDE-YGSPSTAGDIAYIDYLFLGDYVDRGQHSLETITLLLALKVEYPNNVHLIRGNHEA 774 (975)
Q Consensus 698 ~~i~vvGDiHG~~~--~L~~ll~~-~g~~~~~~~~~~~~~vfLGDyVDRG~~s~evl~ll~~lk~~~P~~v~llrGNHE~ 774 (975)
++|.+++|+|++.. ++.+.|.. +.....+ .+|++||++| .+++.+|..+. ..+++++||||.
T Consensus 11 m~i~~iSD~H~~~~~~~~~~~l~~~~~~~~~d------~ii~~GDl~~-----~~~~~~l~~~~----~~~~~v~GNhD~ 75 (192)
T 1z2w_A 11 MLVLVLGDLHIPHRCNSLPAKFKKLLVPGKIQ------HILCTGNLCT-----KESYDYLKTLA----GDVHIVRGDFDE 75 (192)
T ss_dssp CEEEEECCCCBTTTCSSCCHHHHTTCCTTSCS------EEEECSCCBS-----HHHHHHHHHHC----SEEEECCCTTCC
T ss_pred eEEEEEecCCCCccchhHHHHHHHHhccCCCC------EEEEcCCCCC-----HHHHHHHHhcC----CCEEEEcCCcCc
Confidence 68999999999753 23333322 2211112 6888999997 67888877653 369999999997
Q ss_pred cc
Q 002047 775 AD 776 (975)
Q Consensus 775 ~~ 776 (975)
..
T Consensus 76 ~~ 77 (192)
T 1z2w_A 76 NL 77 (192)
T ss_dssp CT
T ss_pred cc
Confidence 54
No 41
>1xm7_A Hypothetical protein AQ_1665; structural genomics, protein structure initi midwest center for structural genomics, PSI, MCSG, unknown; 2.40A {Aquifex aeolicus} SCOP: d.159.1.8
Probab=98.22 E-value=3.4e-06 Score=86.45 Aligned_cols=69 Identities=19% Similarity=0.246 Sum_probs=48.6
Q ss_pred CCEEEEecCCCCHHHH-------------HHHHHHhCC--CCCCCCccceeEEEeccccCCCCChHHHHHHHHHhhhcCC
Q 002047 698 APIKIFGDLHGQFGDL-------------MRLFDEYGS--PSTAGDIAYIDYLFLGDYVDRGQHSLETITLLLALKVEYP 762 (975)
Q Consensus 698 ~~i~vvGDiHG~~~~L-------------~~ll~~~g~--~~~~~~~~~~~~vfLGDyVDRG~~s~evl~ll~~lk~~~P 762 (975)
++|.+++|+|+....+ .++++.+.. ...+ .+|++||++++|+...+++.+|..+.
T Consensus 2 ~~i~~iSD~H~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~D------~vi~~GDl~~~~~~~~~~~~~l~~l~---- 71 (195)
T 1xm7_A 2 AMMYFISDTHFYHENIINLNPEVRFKGFEIVILTNLLKVLKPED------TLYHLGDFTWHFNDKNEYLRIWKALP---- 71 (195)
T ss_dssp CCEEEEBCCCBTCTTHHHHSTTTCCTTHHHHHHHHHHTTCCTTC------EEEECSCCBSCSCCTTSHHHHHHHSS----
T ss_pred cEEEEEeccccCCCccccccCCCCHHHHHHHHHHHHHHhCCCCC------EEEECCCCCCCchhHHHHHHHHHHCC----
Confidence 6799999999654332 223333221 1222 68899999999977778888887763
Q ss_pred CCEEEEeccccccc
Q 002047 763 NNVHLIRGNHEAAD 776 (975)
Q Consensus 763 ~~v~llrGNHE~~~ 776 (975)
..+++++||||...
T Consensus 72 ~~~~~v~GNhD~~~ 85 (195)
T 1xm7_A 72 GRKILVMGNHDKDK 85 (195)
T ss_dssp SEEEEECCTTCCCH
T ss_pred CCEEEEeCCCCCch
Confidence 35999999999854
No 42
>3ib7_A ICC protein; metallophosphoesterase, alpha-beta fold, swapped-dimer, HYDR; HET: BTB; 1.60A {Mycobacterium tuberculosis} PDB: 3ib8_A* 2hy1_A 2hyp_A 2hyo_A
Probab=97.94 E-value=0.0001 Score=81.27 Aligned_cols=72 Identities=18% Similarity=0.283 Sum_probs=47.8
Q ss_pred cCCEEEEecCCC------------CHHHHHHHHHHhCC--CCCCCCccceeEEEeccccCCCCCh-H-HHHHHHHHhhhc
Q 002047 697 KAPIKIFGDLHG------------QFGDLMRLFDEYGS--PSTAGDIAYIDYLFLGDYVDRGQHS-L-ETITLLLALKVE 760 (975)
Q Consensus 697 ~~~i~vvGDiHG------------~~~~L~~ll~~~g~--~~~~~~~~~~~~vfLGDyVDRG~~s-~-evl~ll~~lk~~ 760 (975)
.++|++++|+|. ....|.++++.+.. ...+ -+|++||++|.|... . ++..+|..|...
T Consensus 25 ~~ri~~iSD~H~~~~~~~~~~~~~~~~~l~~~l~~i~~~~~~~d------~vi~~GDl~~~~~~~~~~~~~~~l~~l~~~ 98 (330)
T 3ib7_A 25 DYVLLHISDTHLIGGDRRLYGAVDADDRLGELLEQLNQSGLRPD------AIVFTGDLADKGEPAAYRKLRGLVEPFAAQ 98 (330)
T ss_dssp SEEEEEECCCCBCSSSCCBTTTBCHHHHHHHHHHHHHHHTCCCS------EEEECSCCBTTCCHHHHHHHHHHHHHHHHH
T ss_pred CeEEEEEeCCccCCCCcccccccCHHHHHHHHHHHHHhcCCCCC------EEEECCCCCCCCCHHHHHHHHHHHHHHHhh
Confidence 467999999996 26677777777642 2222 588899999998742 2 223333333222
Q ss_pred CCCCEEEEeccccc
Q 002047 761 YPNNVHLIRGNHEA 774 (975)
Q Consensus 761 ~P~~v~llrGNHE~ 774 (975)
..-.+++++||||.
T Consensus 99 ~~~pv~~v~GNHD~ 112 (330)
T 3ib7_A 99 LGAELVWVMGNHDD 112 (330)
T ss_dssp HTCEEEECCCTTSC
T ss_pred cCCCEEEeCCCCCC
Confidence 23459999999997
No 43
>2yvt_A Hypothetical protein AQ_1956; structural genomics, unknown function, NPPSFA, national PROJ protein structural and functional analyses; 1.60A {Aquifex aeolicus} SCOP: d.159.1.6
Probab=97.94 E-value=4.6e-06 Score=89.04 Aligned_cols=74 Identities=8% Similarity=0.092 Sum_probs=52.7
Q ss_pred cCCEEEEecCCCCHHHHHHHHHHhCCCCCCCCccceeEEEeccccCCCCCh--------------------------HHH
Q 002047 697 KAPIKIFGDLHGQFGDLMRLFDEYGSPSTAGDIAYIDYLFLGDYVDRGQHS--------------------------LET 750 (975)
Q Consensus 697 ~~~i~vvGDiHG~~~~L~~ll~~~g~~~~~~~~~~~~~vfLGDyVDRG~~s--------------------------~ev 750 (975)
.++|.+++|||+++..|.++++.+.....+ -+|++||++|+|..+ .+.
T Consensus 5 ~mri~~iSDlH~~~~~~~~~l~~~~~~~~D------~vi~~GDl~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~ 78 (260)
T 2yvt_A 5 PRKVLAIKNFKERFDLLPKLKGVIAEKQPD------ILVVVGNILKNEALEKEYERAHLARREPNRKVIHENEHYIIETL 78 (260)
T ss_dssp CCEEEEEECCTTCGGGHHHHHHHHHHHCCS------EEEEESCCCCCHHHHHHHHHHHHTTCCCCTHHHHHHHHHHHHHH
T ss_pred eEEEEEEeecCCChHHHHHHHHHHHhcCCC------EEEECCCCCCccCcchhhhhhhhhhcccchhhhhHHHHHHHHHH
Confidence 368999999999999998888876322222 688999999999652 123
Q ss_pred HHHHHHhhhcCCCCEEEEeccccccch
Q 002047 751 ITLLLALKVEYPNNVHLIRGNHEAADI 777 (975)
Q Consensus 751 l~ll~~lk~~~P~~v~llrGNHE~~~~ 777 (975)
..+|-.|+. .+..+++++||||....
T Consensus 79 ~~~l~~l~~-~~~pv~~v~GNHD~~~~ 104 (260)
T 2yvt_A 79 DKFFREIGE-LGVKTFVVPGKNDAPLK 104 (260)
T ss_dssp HHHHHHHHT-TCSEEEEECCTTSCCHH
T ss_pred HHHHHHHHh-cCCcEEEEcCCCCchhh
Confidence 344444443 23469999999998653
No 44
>3rl5_A Metallophosphoesterase mpped2; alpha-beta fold, metallophosphodiesterase, active site mutan nucleotide polymorphism, hydrolase; 1.26A {Rattus norvegicus} PDB: 3rl3_A* 3rl4_A*
Probab=97.37 E-value=0.0029 Score=68.67 Aligned_cols=63 Identities=24% Similarity=0.263 Sum_probs=43.2
Q ss_pred CCEEEEecCCCCHHHHHHHHHHhCCCCCCCCccceeEEEeccccCCCCCh--HHHHHHHHHhhhcCCCCEEEEecccccc
Q 002047 698 APIKIFGDLHGQFGDLMRLFDEYGSPSTAGDIAYIDYLFLGDYVDRGQHS--LETITLLLALKVEYPNNVHLIRGNHEAA 775 (975)
Q Consensus 698 ~~i~vvGDiHG~~~~L~~ll~~~g~~~~~~~~~~~~~vfLGDyVDRG~~s--~evl~ll~~lk~~~P~~v~llrGNHE~~ 775 (975)
++|++|+|+||+...| .++..+ -+|++||++|+|... .+++.+|..+. + ..++++.||||..
T Consensus 60 mri~~iSD~H~~~~~l-------~i~~~D------~vi~aGDl~~~g~~~e~~~~~~~L~~l~--~-~~v~~V~GNHD~~ 123 (296)
T 3rl5_A 60 TRFVCISDTRSRTDGI-------QMPYGD------ILLHTGDFTELGLPSEVKKFNDWLGNLP--Y-EYKIVIAGNHELT 123 (296)
T ss_dssp EEEEEEBCCTTCCTTC-------CCCSCS------EEEECSCCSSSCCHHHHHHHHHHHHTSC--C-SEEEECCCTTCGG
T ss_pred eEEEEEeeCCCCcchh-------ccCCCC------EEEECCcccCCCCHHHHHHHHHHHHhCC--C-CeEEEEcCCcccc
Confidence 5799999999998643 223322 688899999999742 22344443331 1 2489999999985
Q ss_pred c
Q 002047 776 D 776 (975)
Q Consensus 776 ~ 776 (975)
.
T Consensus 124 ~ 124 (296)
T 3rl5_A 124 F 124 (296)
T ss_dssp G
T ss_pred c
Confidence 4
No 45
>3d03_A Phosphohydrolase; glycerophosphodiesterase, metallohydrolase, phosphatase, metal ION; 1.90A {Enterobacter aerogenes} SCOP: d.159.1.11 PDB: 2zoa_A 2zo9_B 2dxn_A 2dxl_A
Probab=97.30 E-value=0.00036 Score=74.59 Aligned_cols=68 Identities=19% Similarity=0.213 Sum_probs=46.8
Q ss_pred CCEEEEecCCCCH------------HHHHHHHHHhCCC--CCCCCccceeEEEeccccCCCCChH--HHHHHHHHhhhcC
Q 002047 698 APIKIFGDLHGQF------------GDLMRLFDEYGSP--STAGDIAYIDYLFLGDYVDRGQHSL--ETITLLLALKVEY 761 (975)
Q Consensus 698 ~~i~vvGDiHG~~------------~~L~~ll~~~g~~--~~~~~~~~~~~vfLGDyVDRG~~s~--evl~ll~~lk~~~ 761 (975)
++|.+++|+|+.. ..|.++++.+... ..+ -+|++||+++.|.... ++..+|..|
T Consensus 1 mri~~iSD~H~~~~~~~~~g~~~~~~~l~~~l~~~~~~~~~~d------~vi~~GDl~~~~~~~~~~~~~~~l~~l---- 70 (274)
T 3d03_A 1 MLLAHISDTHFRSRGEKLYGFIDVNAANADVVSQLNALRERPD------AVVVSGDIVNCGRPEEYQVARQILGSL---- 70 (274)
T ss_dssp CEEEEECCCCBCSTTCCBTTTBCHHHHHHHHHHHHHTCSSCCS------EEEEESCCBSSCCHHHHHHHHHHHTTC----
T ss_pred CEEEEEecCCcCCCCcccccccCHHHHHHHHHHHHHhcCCCCC------EEEECCCCCCCCCHHHHHHHHHHHHhc----
Confidence 4689999999985 6788888776432 112 6889999999887421 222222222
Q ss_pred CCCEEEEecccccc
Q 002047 762 PNNVHLIRGNHEAA 775 (975)
Q Consensus 762 P~~v~llrGNHE~~ 775 (975)
+-.++.++||||..
T Consensus 71 ~~p~~~v~GNHD~~ 84 (274)
T 3d03_A 71 NYPLYLIPGNHDDK 84 (274)
T ss_dssp SSCEEEECCTTSCH
T ss_pred CCCEEEECCCCCCH
Confidence 33599999999984
No 46
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=97.25 E-value=0.043 Score=57.72 Aligned_cols=185 Identities=17% Similarity=0.106 Sum_probs=116.1
Q ss_pred CCEEEEEcCCCCCCCCCCCCCCCCCCCCcccccccccCcEEEEECCCCcEEEecCCCCCCCCccceEEEEeCCEEEEEec
Q 002047 113 GPRLILFGGATALEGNSAASGTPSSAGSAGIRLAGATADVHCYDVLTNKWSRITPFGEPPTPRAAHVATAVGTMVVIQGG 192 (975)
Q Consensus 113 ~~~lyvfGG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dv~~yD~~t~~W~~l~~~g~~P~pR~~hsa~~~~~~iyv~GG 192 (975)
++.||+-.|..+. +.+..+|+.+++-..-... |..-.+.+++..+++||+...
T Consensus 30 ~~~LyestG~~g~------------------------S~v~~vD~~tgkv~~~~~l---~~~~fgeGi~~~~~~ly~ltw 82 (243)
T 3mbr_X 30 RGHLYESTGETGR------------------------SSVRKVDLETGRILQRAEV---PPPYFGAGIVAWRDRLIQLTW 82 (243)
T ss_dssp TTEEEEEECCTTS------------------------CEEEEEETTTCCEEEEEEC---CTTCCEEEEEEETTEEEEEES
T ss_pred CCEEEEECCCCCC------------------------ceEEEEECCCCCEEEEEeC---CCCcceeEEEEeCCEEEEEEe
Confidence 6899999996532 4788999999986665444 444566788889999999865
Q ss_pred cCCCCCccccEEEEEcCCCCCcEEEEEecCCCCCCCcccEEEEeCCcEEEEEcCCCCCCCCCcEEEEECCCCCcEEEEcc
Q 002047 193 IGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGPRYGHVMALVGQRYLMAIGGNDGKRPLADVWALDTAAKPYEWRKLE 272 (975)
Q Consensus 193 ~~~~~~~~~dv~~yD~~t~~~~W~~v~~~g~~P~~R~~h~~~~~~~~~lyV~GG~~g~~~~ndv~~yDl~s~~~~W~~v~ 272 (975)
. .+.+++||..+.. .-.++ +.+-.+.+++.-++ .||+.=| .+.++.+|+.+.. .-..+.
T Consensus 83 ~------~~~v~v~D~~tl~-~~~ti------~~~~~Gwglt~dg~-~L~vSdg------s~~l~~iDp~t~~-~~~~I~ 141 (243)
T 3mbr_X 83 R------NHEGFVYDLATLT-PRARF------RYPGEGWALTSDDS-HLYMSDG------TAVIRKLDPDTLQ-QVGSIK 141 (243)
T ss_dssp S------SSEEEEEETTTTE-EEEEE------ECSSCCCEEEECSS-CEEEECS------SSEEEEECTTTCC-EEEEEE
T ss_pred e------CCEEEEEECCcCc-EEEEE------eCCCCceEEeeCCC-EEEEECC------CCeEEEEeCCCCe-EEEEEE
Confidence 3 4789999998853 22233 23346777775554 7998644 3579999999872 122222
Q ss_pred CCCCCCCCcceeEEEEEeCCeEEEecCCCCCCCCccceEEeecCCCCeEEEEECCCCCCCC--------cceeeEEEe--
Q 002047 273 PEGEGPPPCMYATASARSDGLLLLCGGRDASSVPLASAYGLAKHRDGRWEWAIAPGVSPSP--------RYQHAAVFV-- 342 (975)
Q Consensus 273 ~~~~~P~~r~~~~a~~~~~g~lyvfGG~~~~~~~l~d~~~~~~~~~~~W~w~~~~g~~P~~--------R~~hs~v~~-- 342 (975)
.... +.+...--.....+++||+--- ..+++..+++.+...-.|..+.+..|.. -.--+.+..
T Consensus 142 V~~~-g~~~~~lNeLe~~~G~lyanvw------~s~~I~vIDp~tG~V~~~idl~~l~~~~~~~~~~~~~vlNGIA~d~~ 214 (243)
T 3mbr_X 142 VTAG-GRPLDNLNELEWVNGELLANVW------LTSRIARIDPASGKVVAWIDLQALVPDADALTDSTNDVLNGIAFDAE 214 (243)
T ss_dssp CEET-TEECCCEEEEEEETTEEEEEET------TTTEEEEECTTTCBEEEEEECGGGSTTTTSCCCTTSSCEEEEEEETT
T ss_pred EccC-CcccccceeeEEeCCEEEEEEC------CCCeEEEEECCCCCEEEEEECCcCccccccccCCcCCceEEEEEcCC
Confidence 2111 1111111223455889987532 2457888888776666788877543221 122334444
Q ss_pred CCEEEEEcCc
Q 002047 343 NARLHVSGGA 352 (975)
Q Consensus 343 ~~~L~V~GG~ 352 (975)
+++|||.|-.
T Consensus 215 ~~~lfVTGK~ 224 (243)
T 3mbr_X 215 HDRLFVTGKR 224 (243)
T ss_dssp TTEEEEEETT
T ss_pred CCEEEEECCC
Confidence 4789998753
No 47
>2q8u_A Exonuclease, putative; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, hydrolase; HET: MSE; 2.20A {Thermotoga maritima MSB8} PDB: 3thn_A
Probab=97.08 E-value=0.0004 Score=77.28 Aligned_cols=77 Identities=23% Similarity=0.294 Sum_probs=47.0
Q ss_pred Ceeee-cCCEEEEecCC-C----C-----------HHHHHHHHHHhCCCCCCCCccceeEEEecc-ccCCCCChHHH---
Q 002047 692 SVLQL-KAPIKIFGDLH-G----Q-----------FGDLMRLFDEYGSPSTAGDIAYIDYLFLGD-YVDRGQHSLET--- 750 (975)
Q Consensus 692 ~~l~l-~~~i~vvGDiH-G----~-----------~~~L~~ll~~~g~~~~~~~~~~~~~vfLGD-yVDRG~~s~ev--- 750 (975)
-++.. .++|+.++|+| | . ...|.++++.+.....+ -+|+.|| ++|++..+.+.
T Consensus 12 ~~~~~~~mrilh~SD~HlG~~~~~~~~~~~r~~~~~~~l~~lv~~~~~~~~D------~vliaGD~l~d~~~~~~~~~~~ 85 (336)
T 2q8u_A 12 HVINLKELKILHTSDWHLGVTSWTSSRPVDRREELKKALDKVVEEAEKREVD------LILLTGDLLHSRNNPSVVALHD 85 (336)
T ss_dssp CCTTCCEEEEEEEECCCBTCEECTTTCCEECHHHHHHHHHHHHHHHHHHTCS------EEEEESCSBSCSSCCCHHHHHH
T ss_pred hheecCceEEEEECcccCCCCccccccCcChhHHHHHHHHHHHHHHHHhCCC------EEEECCccccCCCCCCHHHHHH
Confidence 34444 36899999999 8 3 34455666554321222 5888999 99999877664
Q ss_pred -HHHHHHhhhcCCCCEEEEeccccccc
Q 002047 751 -ITLLLALKVEYPNNVHLIRGNHEAAD 776 (975)
Q Consensus 751 -l~ll~~lk~~~P~~v~llrGNHE~~~ 776 (975)
..+|..|+.. -.|+++.||||...
T Consensus 86 ~~~~l~~L~~~--~pv~~i~GNHD~~~ 110 (336)
T 2q8u_A 86 LLDYLKRMMRT--APVVVLPGNHDWKG 110 (336)
T ss_dssp HHHHHHHHHHH--SCEEECCC------
T ss_pred HHHHHHHHHhc--CCEEEECCCCCccc
Confidence 4555555433 35999999999865
No 48
>2nxf_A Putative dimetal phosphatase; dinuclear metal center phosphatase, metalloprotein, metallophosphoesterase, protein structure initiative; 1.70A {Danio rerio} SCOP: d.159.1.12
Probab=96.99 E-value=0.00037 Score=76.11 Aligned_cols=72 Identities=19% Similarity=0.172 Sum_probs=48.2
Q ss_pred CCEEEEecCCCCH-------------------HHHHHHHHHhCCCCCCCCccceeEEEeccccCCCC----ChHHHHHHH
Q 002047 698 APIKIFGDLHGQF-------------------GDLMRLFDEYGSPSTAGDIAYIDYLFLGDYVDRGQ----HSLETITLL 754 (975)
Q Consensus 698 ~~i~vvGDiHG~~-------------------~~L~~ll~~~g~~~~~~~~~~~~~vfLGDyVDRG~----~s~evl~ll 754 (975)
.+|++++|+|... ..|.++++.+.....+ -+|++||+++.+. ...+.+..+
T Consensus 6 ~~i~~isD~H~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~d------~vi~~GD~~~~~~~~~~~~~~~~~~~ 79 (322)
T 2nxf_A 6 FTFGLIADVQYADIEDGENYLRTRRRYYRGSADLLRDAVLQWRRERVQ------CVVQLGDIIDGHNRRRDASDRALDTV 79 (322)
T ss_dssp EEEEEECCCCBCSSCCEECTTSSSEECTTHHHHHHHHHHHHHHHTTCS------EEEECSCCBCTHHHHTTCHHHHHHHH
T ss_pred eEEEEEeeccccccCcccccccchHHHHHHHHHHHHHHHHHHHhcCCC------EEEECCCccCCCCCcchHHHHHHHHH
Confidence 4689999999876 5566666655322222 5889999999875 123444434
Q ss_pred HHhhhcCCCCEEEEecccccc
Q 002047 755 LALKVEYPNNVHLIRGNHEAA 775 (975)
Q Consensus 755 ~~lk~~~P~~v~llrGNHE~~ 775 (975)
+.+-...+..++++.||||..
T Consensus 80 ~~~l~~~~~p~~~v~GNHD~~ 100 (322)
T 2nxf_A 80 MAELDACSVDVHHVWGNHEFY 100 (322)
T ss_dssp HHHHHTTCSEEEECCCHHHHH
T ss_pred HHHHHhcCCcEEEecCCCCcc
Confidence 333333445799999999985
No 49
>3av0_A DNA double-strand break repair protein MRE11; DNA repair, calcineurin-like phosphoesterase, ABC transporte domain-like; HET: DNA AGS; 3.10A {Methanocaldococcus jannaschii} PDB: 3auz_A*
Probab=96.99 E-value=0.00079 Score=76.44 Aligned_cols=73 Identities=15% Similarity=0.149 Sum_probs=49.4
Q ss_pred cCCEEEEecCCCCH-------------HHHHHHHHHhCCCCCCCCccceeEEEeccccCCCCChHHH----HHHHHHhhh
Q 002047 697 KAPIKIFGDLHGQF-------------GDLMRLFDEYGSPSTAGDIAYIDYLFLGDYVDRGQHSLET----ITLLLALKV 759 (975)
Q Consensus 697 ~~~i~vvGDiHG~~-------------~~L~~ll~~~g~~~~~~~~~~~~~vfLGDyVDRG~~s~ev----l~ll~~lk~ 759 (975)
.++|++++|+|+.. ..|.++++.+.....+ -+|+.||++|++..+.+. +.+|..|+.
T Consensus 20 ~mrilhiSD~Hlg~~~~~~~~r~~~~~~~l~~~v~~~~~~~~D------~VliaGDl~d~~~p~~~~~~~~~~~l~~L~~ 93 (386)
T 3av0_A 20 HMMFVHIADNHLGYRQYNLDDREKDIYDSFKLCIKKILEIKPD------VVLHSGDLFNDLRPPVKALRIAMQAFKKLHE 93 (386)
T ss_dssp CCEEEEECCCCBTCCGGGCHHHHHHHHHHHHHHHHHHHTTCCS------EEEECSCSBSSSSCCHHHHHHHHHHHHHHHH
T ss_pred CeEEEEEccCCCCccccCcchhhHHHHHHHHHHHHHHHHcCCC------EEEECCCCCCCCCCCHHHHHHHHHHHHHHHh
Confidence 36899999999762 3466777765432222 688899999999554433 344444432
Q ss_pred cCCCCEEEEeccccccc
Q 002047 760 EYPNNVHLIRGNHEAAD 776 (975)
Q Consensus 760 ~~P~~v~llrGNHE~~~ 776 (975)
.+-.|+++.||||...
T Consensus 94 -~~~pv~~v~GNHD~~~ 109 (386)
T 3av0_A 94 -NNIKVYIVAGNHEMPR 109 (386)
T ss_dssp -TTCEEEECCCGGGSCS
T ss_pred -cCCcEEEEcCCCCCCc
Confidence 2346999999999854
No 50
>1ii7_A MRE11 nuclease; RAD50, DNA double-strand break repair, DAMP, manganese, replication; HET: DA; 2.20A {Pyrococcus furiosus} SCOP: d.159.1.4 PDB: 3dsc_A* 3dsd_A* 1s8e_A
Probab=96.95 E-value=0.0008 Score=74.73 Aligned_cols=71 Identities=21% Similarity=0.229 Sum_probs=46.5
Q ss_pred CCEEEEecCCCCH-------------HHHHHHHHHhCCCCCCCCccceeEEEeccccCCCCChHHHHH----HHHHhhhc
Q 002047 698 APIKIFGDLHGQF-------------GDLMRLFDEYGSPSTAGDIAYIDYLFLGDYVDRGQHSLETIT----LLLALKVE 760 (975)
Q Consensus 698 ~~i~vvGDiHG~~-------------~~L~~ll~~~g~~~~~~~~~~~~~vfLGDyVDRG~~s~evl~----ll~~lk~~ 760 (975)
+++++++|+|... ..|.++++.+.....+ -+|+.||++|++..+.+.+. +|..|+.
T Consensus 1 mkilh~sD~Hlg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D------~vl~~GDl~d~~~~~~~~~~~~~~~l~~l~~- 73 (333)
T 1ii7_A 1 MKFAHLADIHLGYEQFHKPQREEEFAEAFKNALEIAVQENVD------FILIAGDLFHSSRPSPGTLKKAIALLQIPKE- 73 (333)
T ss_dssp CEEEEECCCCBTCCGGGCHHHHHHHHHHHHHHHHHHHHTTCS------EEEEESCSBSSSSCCHHHHHHHHHHHHHHHT-
T ss_pred CEEEEEcccCCCCcccCCchhhHHHHHHHHHHHHHHHhcCCC------EEEECCCcCCCCCCCHHHHHHHHHHHHHHHH-
Confidence 4689999999874 3455555554322222 68889999999855544433 3334432
Q ss_pred CCCCEEEEecccccc
Q 002047 761 YPNNVHLIRGNHEAA 775 (975)
Q Consensus 761 ~P~~v~llrGNHE~~ 775 (975)
..-.|+++.||||..
T Consensus 74 ~~~~v~~v~GNHD~~ 88 (333)
T 1ii7_A 74 HSIPVFAIEGNHDRT 88 (333)
T ss_dssp TTCCEEEECCTTTCC
T ss_pred CCCcEEEeCCcCCCc
Confidence 123599999999985
No 51
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=96.94 E-value=0.16 Score=55.57 Aligned_cols=182 Identities=11% Similarity=0.002 Sum_probs=100.2
Q ss_pred CcEEEEECCCCcEE-EecCCCCCCCCccceEEEE-eCCEEEEEeccCCCCCccccEEEEEcCCCCCcEE-EEEecCCCC-
Q 002047 150 ADVHCYDVLTNKWS-RITPFGEPPTPRAAHVATA-VGTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWH-RVVVQGPGP- 225 (975)
Q Consensus 150 ~dv~~yD~~t~~W~-~l~~~g~~P~pR~~hsa~~-~~~~iyv~GG~~~~~~~~~dv~~yD~~t~~~~W~-~v~~~g~~P- 225 (975)
+.+.++|+.+.+-. .+... .. -+.++. -++++|+.... .+.++++|+.+.. -. .++ .+...
T Consensus 64 ~~v~viD~~t~~~~~~i~~~---~~---p~~i~~~~~g~lyv~~~~------~~~v~~iD~~t~~--~~~~i~-~g~~~~ 128 (328)
T 3dsm_A 64 HVIFAIDINTFKEVGRITGF---TS---PRYIHFLSDEKAYVTQIW------DYRIFIINPKTYE--ITGYIE-CPDMDM 128 (328)
T ss_dssp TEEEEEETTTCCEEEEEECC---SS---EEEEEEEETTEEEEEEBS------CSEEEEEETTTTE--EEEEEE-CTTCCT
T ss_pred CEEEEEECcccEEEEEcCCC---CC---CcEEEEeCCCeEEEEECC------CCeEEEEECCCCe--EEEEEE-cCCccc
Confidence 47889999988763 34221 22 233444 56799998743 3679999998864 22 232 22200
Q ss_pred CCCcccEEEEeCCcEEEEEcCCCCCCCCCcEEEEECCCCCcEEEEccCCCCCCCCcceeEEEEEeCCeEEEecCCCCCCC
Q 002047 226 GPRYGHVMALVGQRYLMAIGGNDGKRPLADVWALDTAAKPYEWRKLEPEGEGPPPCMYATASARSDGLLLLCGGRDASSV 305 (975)
Q Consensus 226 ~~R~~h~~~~~~~~~lyV~GG~~g~~~~ndv~~yDl~s~~~~W~~v~~~~~~P~~r~~~~a~~~~~g~lyvfGG~~~~~~ 305 (975)
....-+.+++.+ ++|||..- ..-+.+.++|+.+. +....-..+..| +..+...++++|+.........
T Consensus 129 ~~~~p~~i~~~~-~~lyv~~~----~~~~~v~viD~~t~--~~~~~i~~g~~p-----~~i~~~~dG~l~v~~~~~~~~~ 196 (328)
T 3dsm_A 129 ESGSTEQMVQYG-KYVYVNCW----SYQNRILKIDTETD--KVVDELTIGIQP-----TSLVMDKYNKMWTITDGGYEGS 196 (328)
T ss_dssp TTCBCCCEEEET-TEEEEEEC----TTCCEEEEEETTTT--EEEEEEECSSCB-----CCCEECTTSEEEEEBCCBCTTC
T ss_pred cCCCcceEEEEC-CEEEEEcC----CCCCEEEEEECCCC--eEEEEEEcCCCc-----cceEEcCCCCEEEEECCCccCC
Confidence 000223444444 48999842 12357999999998 544332222222 2233345688888754321111
Q ss_pred C----ccceEEeecCCCCeEEE-EECCCCCCCCcceeeEEEe--CCEEEEEcCcCCCCCccccCCcEEEEECCCCeE
Q 002047 306 P----LASAYGLAKHRDGRWEW-AIAPGVSPSPRYQHAAVFV--NARLHVSGGALGGGRMVEDSSSVAVLDTAAGVW 375 (975)
Q Consensus 306 ~----l~d~~~~~~~~~~~W~w-~~~~g~~P~~R~~hs~v~~--~~~L~V~GG~~~~~~~~~~~~dv~~yD~~t~~W 375 (975)
. .+.++.++..+. +... ...+ ....-..+++. ++.||+..+ .+++||+++.+.
T Consensus 197 ~~~~~~~~v~~id~~t~-~v~~~~~~~----~g~~p~~la~~~d~~~lyv~~~------------~v~~~d~~t~~~ 256 (328)
T 3dsm_A 197 PYGYEAPSLYRIDAETF-TVEKQFKFK----LGDWPSEVQLNGTRDTLYWINN------------DIWRMPVEADRV 256 (328)
T ss_dssp SSCBCCCEEEEEETTTT-EEEEEEECC----TTCCCEEEEECTTSCEEEEESS------------SEEEEETTCSSC
T ss_pred ccccCCceEEEEECCCC-eEEEEEecC----CCCCceeEEEecCCCEEEEEcc------------EEEEEECCCCce
Confidence 1 256788876544 3322 2221 12222445555 567888632 489999998864
No 52
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=96.92 E-value=0.25 Score=53.93 Aligned_cols=231 Identities=8% Similarity=-0.038 Sum_probs=126.2
Q ss_pred cCcEEEEECCCCcEEEecCC--CCCCCCccceEEEEeCCEEEEEeccCCCCCccccEEEEEcCCCCCcEEEEEecCCCCC
Q 002047 149 TADVHCYDVLTNKWSRITPF--GEPPTPRAAHVATAVGTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPG 226 (975)
Q Consensus 149 ~~dv~~yD~~t~~W~~l~~~--g~~P~pR~~hsa~~~~~~iyv~GG~~~~~~~~~dv~~yD~~t~~~~W~~v~~~g~~P~ 226 (975)
.+.+..||+.++++..--.. ...+.....+.++..++++|+.... .+.+.++|+.+.. .-..++ ...
T Consensus 16 ~~~l~~~d~~t~~~~~~i~~~~n~~~lg~~~~~i~~~~~~lyv~~~~------~~~v~viD~~t~~-~~~~i~---~~~- 84 (328)
T 3dsm_A 16 NATLSYYDPATCEVENEVFYRANGFKLGDVAQSMVIRDGIGWIVVNN------SHVIFAIDINTFK-EVGRIT---GFT- 84 (328)
T ss_dssp CBEEEEEETTTTEEECSHHHHHHSSCCBSCEEEEEEETTEEEEEEGG------GTEEEEEETTTCC-EEEEEE---CCS-
T ss_pred CceEEEEECCCCEEhhhhHhhhcCcccCccceEEEEECCEEEEEEcC------CCEEEEEECcccE-EEEEcC---CCC-
Confidence 35788999999988653210 0113344456777788999998753 3679999999864 112332 112
Q ss_pred CCcccEEEE-eCCcEEEEEcCCCCCCCCCcEEEEECCCCCcEEEEccCCCCCCCCcceeEEEEEeCCeEEEecCCCCCCC
Q 002047 227 PRYGHVMAL-VGQRYLMAIGGNDGKRPLADVWALDTAAKPYEWRKLEPEGEGPPPCMYATASARSDGLLLLCGGRDASSV 305 (975)
Q Consensus 227 ~R~~h~~~~-~~~~~lyV~GG~~g~~~~ndv~~yDl~s~~~~W~~v~~~~~~P~~r~~~~a~~~~~g~lyvfGG~~~~~~ 305 (975)
.-+.+++ -++ ++||.... .+.++++|+.+....++. . .+........-..+++.++++|+..-.
T Consensus 85 --~p~~i~~~~~g-~lyv~~~~-----~~~v~~iD~~t~~~~~~i-~-~g~~~~~~~~p~~i~~~~~~lyv~~~~----- 149 (328)
T 3dsm_A 85 --SPRYIHFLSDE-KAYVTQIW-----DYRIFIINPKTYEITGYI-E-CPDMDMESGSTEQMVQYGKYVYVNCWS----- 149 (328)
T ss_dssp --SEEEEEEEETT-EEEEEEBS-----CSEEEEEETTTTEEEEEE-E-CTTCCTTTCBCCCEEEETTEEEEEECT-----
T ss_pred --CCcEEEEeCCC-eEEEEECC-----CCeEEEEECCCCeEEEEE-E-cCCccccCCCcceEEEECCEEEEEcCC-----
Confidence 2234444 455 89998643 368999999988333322 1 121000000111222378999998420
Q ss_pred CccceEEeecCCCCeEEEEECCCCCCCCcceeeEEEe-CCEEEEEcCcCCCCC-ccccCCcEEEEECCCCeEEEcccCcC
Q 002047 306 PLASAYGLAKHRDGRWEWAIAPGVSPSPRYQHAAVFV-NARLHVSGGALGGGR-MVEDSSSVAVLDTAAGVWCDTKSVVT 383 (975)
Q Consensus 306 ~l~d~~~~~~~~~~~W~w~~~~g~~P~~R~~hs~v~~-~~~L~V~GG~~~~~~-~~~~~~dv~~yD~~t~~W~~v~~~~~ 383 (975)
.-+.+..++..+. +..+....+..| +.+++. ++++|+......... .....+.|+++|+++.+....-..
T Consensus 150 ~~~~v~viD~~t~-~~~~~i~~g~~p-----~~i~~~~dG~l~v~~~~~~~~~~~~~~~~~v~~id~~t~~v~~~~~~-- 221 (328)
T 3dsm_A 150 YQNRILKIDTETD-KVVDELTIGIQP-----TSLVMDKYNKMWTITDGGYEGSPYGYEAPSLYRIDAETFTVEKQFKF-- 221 (328)
T ss_dssp TCCEEEEEETTTT-EEEEEEECSSCB-----CCCEECTTSEEEEEBCCBCTTCSSCBCCCEEEEEETTTTEEEEEEEC--
T ss_pred CCCEEEEEECCCC-eEEEEEEcCCCc-----cceEEcCCCCEEEEECCCccCCccccCCceEEEEECCCCeEEEEEec--
Confidence 1235667766544 433332222222 233333 578888753221110 001136799999999986643322
Q ss_pred CCCCCCCccccCCCCCccCCCccceeEEEEE--CCEEEEEcCCCCCCCccceEeeeccc
Q 002047 384 SPRTGRYSADAAGGDAAVELTRRCRHAAAAV--GDLIFIYGGLRGGVLLDDLLVAEDLA 440 (975)
Q Consensus 384 ~p~~~~~~~~~~~~~~~~~p~~R~~hsa~~~--~~~LyV~GG~~~~~~l~Dv~~ld~~~ 440 (975)
+....-+.+++. +++||+..+ .++++|...
T Consensus 222 -------------------~~g~~p~~la~~~d~~~lyv~~~--------~v~~~d~~t 253 (328)
T 3dsm_A 222 -------------------KLGDWPSEVQLNGTRDTLYWINN--------DIWRMPVEA 253 (328)
T ss_dssp -------------------CTTCCCEEEEECTTSCEEEEESS--------SEEEEETTC
T ss_pred -------------------CCCCCceeEEEecCCCEEEEEcc--------EEEEEECCC
Confidence 111223445554 568998754 688888653
No 53
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=96.75 E-value=0.96 Score=49.79 Aligned_cols=187 Identities=15% Similarity=0.170 Sum_probs=102.4
Q ss_pred cEEEEECCCC--cEEEecCCCCC----CCCccceEEEEeCCEEEEEeccCCCCCccccEEEEEcCCCCCcEEEEEecCCC
Q 002047 151 DVHCYDVLTN--KWSRITPFGEP----PTPRAAHVATAVGTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPG 224 (975)
Q Consensus 151 dv~~yD~~t~--~W~~l~~~g~~----P~pR~~hsa~~~~~~iyv~GG~~~~~~~~~dv~~yD~~t~~~~W~~v~~~g~~ 224 (975)
.+++||..++ .|+.-...... .......+.++.++.||+... ...++.||..+....|+.-..
T Consensus 64 ~v~a~d~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~-------~g~l~a~d~~tG~~~W~~~~~---- 132 (376)
T 3q7m_A 64 LVKALNADDGKEIWSVSLAEKDGWFSKEPALLSGGVTVSGGHVYIGSE-------KAQVYALNTSDGTVAWQTKVA---- 132 (376)
T ss_dssp EEEEEETTTCCEEEEEECCC---CCSCCCCCEEEEEEEETTEEEEEET-------TSEEEEEETTTCCEEEEEECS----
T ss_pred eEEEEEccCCceeeeecCccccccccccCcccccCceEeCCEEEEEcC-------CCEEEEEECCCCCEEEEEeCC----
Confidence 6889998765 47765432100 012233445556778888643 247999999987667876431
Q ss_pred CCCCcccEEEEeCCcEEEEEcCCCCCCCCCcEEEEECCCCCcEEEEccCCCCCCCCcceeEEEEEeCCeEEEecCCCCCC
Q 002047 225 PGPRYGHVMALVGQRYLMAIGGNDGKRPLADVWALDTAAKPYEWRKLEPEGEGPPPCMYATASARSDGLLLLCGGRDASS 304 (975)
Q Consensus 225 P~~R~~h~~~~~~~~~lyV~GG~~g~~~~ndv~~yDl~s~~~~W~~v~~~~~~P~~r~~~~a~~~~~g~lyvfGG~~~~~ 304 (975)
.. .....++.++ .+|+... -..++.||+.+....|+.-...... ........++.++.+|+. ..+
T Consensus 133 -~~-~~~~p~~~~~-~v~v~~~------~g~l~~~d~~tG~~~W~~~~~~~~~--~~~~~~~~~~~~~~v~~g-~~~--- 197 (376)
T 3q7m_A 133 -GE-ALSRPVVSDG-LVLIHTS------NGQLQALNEADGAVKWTVNLDMPSL--SLRGESAPTTAFGAAVVG-GDN--- 197 (376)
T ss_dssp -SC-CCSCCEEETT-EEEEECT------TSEEEEEETTTCCEEEEEECCC-------CCCCCCEEETTEEEEC-CTT---
T ss_pred -Cc-eEcCCEEECC-EEEEEcC------CCeEEEEECCCCcEEEEEeCCCCce--eecCCCCcEEECCEEEEE-cCC---
Confidence 11 1222234455 6777543 2379999999887789875432210 011123334457777773 221
Q ss_pred CCccceEEeecCCCCeEEEEECCCCCCC----Cc---ceeeEEEeCCEEEEEcCcCCCCCccccCCcEEEEECCCC--eE
Q 002047 305 VPLASAYGLAKHRDGRWEWAIAPGVSPS----PR---YQHAAVFVNARLHVSGGALGGGRMVEDSSSVAVLDTAAG--VW 375 (975)
Q Consensus 305 ~~l~d~~~~~~~~~~~W~w~~~~g~~P~----~R---~~hs~v~~~~~L~V~GG~~~~~~~~~~~~dv~~yD~~t~--~W 375 (975)
..++.++.. +++-.|......+.. .| .....++.++.+|+.+. ...+++||++++ .|
T Consensus 198 ---g~l~~~d~~-tG~~~w~~~~~~~~~~~~~~~~~~~~~~p~~~~~~v~~~~~----------~g~l~~~d~~tG~~~w 263 (376)
T 3q7m_A 198 ---GRVSAVLME-QGQMIWQQRISQATGSTEIDRLSDVDTTPVVVNGVVFALAY----------NGNLTALDLRSGQIMW 263 (376)
T ss_dssp ---TEEEEEETT-TCCEEEEEECCC-----------CCCCCCEEETTEEEEECT----------TSCEEEEETTTCCEEE
T ss_pred ---CEEEEEECC-CCcEEEEEecccCCCCcccccccccCCCcEEECCEEEEEec----------CcEEEEEECCCCcEEe
Confidence 245666544 455556544322100 11 22344566888888642 234899999877 56
Q ss_pred EE
Q 002047 376 CD 377 (975)
Q Consensus 376 ~~ 377 (975)
..
T Consensus 264 ~~ 265 (376)
T 3q7m_A 264 KR 265 (376)
T ss_dssp EE
T ss_pred ec
Confidence 54
No 54
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=96.69 E-value=0.58 Score=51.60 Aligned_cols=177 Identities=13% Similarity=0.159 Sum_probs=103.0
Q ss_pred CcEEEEECCCCc--EEEecCCCCCCCCccceEEEEeCCEEEEEeccCCCCCccccEEEEEcCCCCCcEEEEEecCCCCCC
Q 002047 150 ADVHCYDVLTNK--WSRITPFGEPPTPRAAHVATAVGTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGP 227 (975)
Q Consensus 150 ~dv~~yD~~t~~--W~~l~~~g~~P~pR~~hsa~~~~~~iyv~GG~~~~~~~~~dv~~yD~~t~~~~W~~v~~~g~~P~~ 227 (975)
..++.||..+++ |+.-.... ....+...+.+..++.||+. .. ...++.||+.+....|+.-. ..|..
T Consensus 153 g~l~~~d~~tG~~~W~~~~~~~-~~~~~~~~~~~~~~~~v~~g-~~------~g~l~~~d~~tG~~~w~~~~---~~~~~ 221 (376)
T 3q7m_A 153 GQLQALNEADGAVKWTVNLDMP-SLSLRGESAPTTAFGAAVVG-GD------NGRVSAVLMEQGQMIWQQRI---SQATG 221 (376)
T ss_dssp SEEEEEETTTCCEEEEEECCC------CCCCCCEEETTEEEEC-CT------TTEEEEEETTTCCEEEEEEC---CC---
T ss_pred CeEEEEECCCCcEEEEEeCCCC-ceeecCCCCcEEECCEEEEE-cC------CCEEEEEECCCCcEEEEEec---ccCCC
Confidence 469999998775 88754321 01112223444557777663 21 24699999988766787653 11211
Q ss_pred C--------cccEEEEeCCcEEEEEcCCCCCCCCCcEEEEECCCCCcEEEEccCCCCCCCCcceeEEEEEeCCeEEEecC
Q 002047 228 R--------YGHVMALVGQRYLMAIGGNDGKRPLADVWALDTAAKPYEWRKLEPEGEGPPPCMYATASARSDGLLLLCGG 299 (975)
Q Consensus 228 R--------~~h~~~~~~~~~lyV~GG~~g~~~~ndv~~yDl~s~~~~W~~v~~~~~~P~~r~~~~a~~~~~g~lyvfGG 299 (975)
. .....++.++ .+|+.+. -..+++||+.+....|+.-.. ........++.+|+...
T Consensus 222 ~~~~~~~~~~~~~p~~~~~-~v~~~~~------~g~l~~~d~~tG~~~w~~~~~---------~~~~~~~~~~~l~~~~~ 285 (376)
T 3q7m_A 222 STEIDRLSDVDTTPVVVNG-VVFALAY------NGNLTALDLRSGQIMWKRELG---------SVNDFIVDGNRIYLVDQ 285 (376)
T ss_dssp --------CCCCCCEEETT-EEEEECT------TSCEEEEETTTCCEEEEECCC---------CEEEEEEETTEEEEEET
T ss_pred CcccccccccCCCcEEECC-EEEEEec------CcEEEEEECCCCcEEeeccCC---------CCCCceEECCEEEEEcC
Confidence 1 1123334454 7777642 236899999988778986421 12335566889998753
Q ss_pred CCCCCCCccceEEeecCCCCeEEEEECCCCCCCCcceeeEEEeCCEEEEEcCcCCCCCccccCCcEEEEECCCCe
Q 002047 300 RDASSVPLASAYGLAKHRDGRWEWAIAPGVSPSPRYQHAAVFVNARLHVSGGALGGGRMVEDSSSVAVLDTAAGV 374 (975)
Q Consensus 300 ~~~~~~~l~d~~~~~~~~~~~W~w~~~~g~~P~~R~~hs~v~~~~~L~V~GG~~~~~~~~~~~~dv~~yD~~t~~ 374 (975)
-..++.++.. +++-.|..... ..+...+.++.++.||+... ...+++||+++++
T Consensus 286 -------~g~l~~~d~~-tG~~~w~~~~~---~~~~~~~~~~~~~~l~v~~~----------~g~l~~~d~~tG~ 339 (376)
T 3q7m_A 286 -------NDRVMALTID-GGVTLWTQSDL---LHRLLTSPVLYNGNLVVGDS----------EGYLHWINVEDGR 339 (376)
T ss_dssp -------TCCEEEEETT-TCCEEEEECTT---TTSCCCCCEEETTEEEEECT----------TSEEEEEETTTCC
T ss_pred -------CCeEEEEECC-CCcEEEeeccc---CCCcccCCEEECCEEEEEeC----------CCeEEEEECCCCc
Confidence 1246777654 45556665421 12233445667888887531 2359999999885
No 55
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=96.53 E-value=0.98 Score=47.33 Aligned_cols=207 Identities=17% Similarity=0.093 Sum_probs=124.6
Q ss_pred ceEEEEeCCEEEEEeccCCCCCccccEEEEEcCCCCCcEEEEEecCCCCCCCcccEEEEeCCcEEEEEcCCCCCCCCCcE
Q 002047 177 AHVATAVGTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGPRYGHVMALVGQRYLMAIGGNDGKRPLADV 256 (975)
Q Consensus 177 ~hsa~~~~~~iyv~GG~~~~~~~~~dv~~yD~~t~~~~W~~v~~~g~~P~~R~~h~~~~~~~~~lyV~GG~~g~~~~ndv 256 (975)
-++....++.+|+..|..+ .+.+.++|+.+.. -..-. ++|..-++.+++..++ +||+.... -+.+
T Consensus 23 tqGL~~~~~~LyestG~~g----~S~v~~vD~~tgk--v~~~~---~l~~~~fgeGi~~~~~-~ly~ltw~-----~~~v 87 (243)
T 3mbr_X 23 TEGLFYLRGHLYESTGETG----RSSVRKVDLETGR--ILQRA---EVPPPYFGAGIVAWRD-RLIQLTWR-----NHEG 87 (243)
T ss_dssp EEEEEEETTEEEEEECCTT----SCEEEEEETTTCC--EEEEE---ECCTTCCEEEEEEETT-EEEEEESS-----SSEE
T ss_pred cccEEEECCEEEEECCCCC----CceEEEEECCCCC--EEEEE---eCCCCcceeEEEEeCC-EEEEEEee-----CCEE
Confidence 3467777889999988632 3579999999874 32222 4566667888888887 89998644 3689
Q ss_pred EEEECCCCCcEEEEccCCCCCCCCcceeEEEEEeCCeEEEecCCCCCCCCccceEEeecCCCCeEEEEECCCCCCCCc-c
Q 002047 257 WALDTAAKPYEWRKLEPEGEGPPPCMYATASARSDGLLLLCGGRDASSVPLASAYGLAKHRDGRWEWAIAPGVSPSPR-Y 335 (975)
Q Consensus 257 ~~yDl~s~~~~W~~v~~~~~~P~~r~~~~a~~~~~g~lyvfGG~~~~~~~l~d~~~~~~~~~~~W~w~~~~g~~P~~R-~ 335 (975)
++||+.+. +-..--+.+ ...-+++..+++||+.-| .+.++.+|+.+...-.-+.+... +.+. .
T Consensus 88 ~v~D~~tl--~~~~ti~~~------~~Gwglt~dg~~L~vSdg-------s~~l~~iDp~t~~~~~~I~V~~~-g~~~~~ 151 (243)
T 3mbr_X 88 FVYDLATL--TPRARFRYP------GEGWALTSDDSHLYMSDG-------TAVIRKLDPDTLQQVGSIKVTAG-GRPLDN 151 (243)
T ss_dssp EEEETTTT--EEEEEEECS------SCCCEEEECSSCEEEECS-------SSEEEEECTTTCCEEEEEECEET-TEECCC
T ss_pred EEEECCcC--cEEEEEeCC------CCceEEeeCCCEEEEECC-------CCeEEEEeCCCCeEEEEEEEccC-Cccccc
Confidence 99999887 433221211 122455566788999755 23577777766544444444321 2221 1
Q ss_pred eeeEEEeCCEEEEEcCcCCCCCccccCCcEEEEECCCCe---EEEcccCcCCCCCCCCccccCCCCCccCCCccceeEEE
Q 002047 336 QHAAVFVNARLHVSGGALGGGRMVEDSSSVAVLDTAAGV---WCDTKSVVTSPRTGRYSADAAGGDAAVELTRRCRHAAA 412 (975)
Q Consensus 336 ~hs~v~~~~~L~V~GG~~~~~~~~~~~~dv~~yD~~t~~---W~~v~~~~~~p~~~~~~~~~~~~~~~~~p~~R~~hsa~ 412 (975)
---+...+++||+--- ..++|.+.|+++++ |..+..+.... .. ...+..-.--+.+
T Consensus 152 lNeLe~~~G~lyanvw---------~s~~I~vIDp~tG~V~~~idl~~l~~~~--~~----------~~~~~~~vlNGIA 210 (243)
T 3mbr_X 152 LNELEWVNGELLANVW---------LTSRIARIDPASGKVVAWIDLQALVPDA--DA----------LTDSTNDVLNGIA 210 (243)
T ss_dssp EEEEEEETTEEEEEET---------TTTEEEEECTTTCBEEEEEECGGGSTTT--TS----------CCCTTSSCEEEEE
T ss_pred ceeeEEeCCEEEEEEC---------CCCeEEEEECCCCCEEEEEECCcCcccc--cc----------ccCCcCCceEEEE
Confidence 1224456888886421 25679999999985 44444331110 00 0001122334555
Q ss_pred EE--CCEEEEEcCCCCCCCccceEeeeccc
Q 002047 413 AV--GDLIFIYGGLRGGVLLDDLLVAEDLA 440 (975)
Q Consensus 413 ~~--~~~LyV~GG~~~~~~l~Dv~~ld~~~ 440 (975)
.. +++|||.|= ++..+|.+.+.+
T Consensus 211 ~d~~~~~lfVTGK-----~wp~~~~v~~~~ 235 (243)
T 3mbr_X 211 FDAEHDRLFVTGK-----RWPMLYEIRLTP 235 (243)
T ss_dssp EETTTTEEEEEET-----TCSEEEEEEECC
T ss_pred EcCCCCEEEEECC-----CCCcEEEEEEec
Confidence 55 679999984 678888877765
No 56
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=96.50 E-value=0.11 Score=55.19 Aligned_cols=184 Identities=12% Similarity=0.016 Sum_probs=113.1
Q ss_pred CCEEEEEcCCCCCCCCCCCCCCCCCCCCcccccccccCcEEEEECCCCcEEEecCCCCCCCCccceEEEEeCCEEEEEec
Q 002047 113 GPRLILFGGATALEGNSAASGTPSSAGSAGIRLAGATADVHCYDVLTNKWSRITPFGEPPTPRAAHVATAVGTMVVIQGG 192 (975)
Q Consensus 113 ~~~lyvfGG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dv~~yD~~t~~W~~l~~~g~~P~pR~~hsa~~~~~~iyv~GG 192 (975)
++.||+-.|..+ .+.+..+|+.+++-..-... +..-.+.+++..+++||+.-.
T Consensus 52 ~~~LyestG~~g------------------------~S~v~~vD~~Tgkv~~~~~l---~~~~FgeGit~~g~~ly~ltw 104 (262)
T 3nol_A 52 NGYFYESTGLNG------------------------RSSIRKVDIESGKTLQQIEL---GKRYFGEGISDWKDKIVGLTW 104 (262)
T ss_dssp TTEEEEEEEETT------------------------EEEEEEECTTTCCEEEEEEC---CTTCCEEEEEEETTEEEEEES
T ss_pred CCEEEEECCCCC------------------------CceEEEEECCCCcEEEEEec---CCccceeEEEEeCCEEEEEEe
Confidence 578999988543 23788999999876554444 333455678888999999955
Q ss_pred cCCCCCccccEEEEEcCCCCCcEEEEEecCCCCCCCcccEEEEeCCcEEEEEcCCCCCCCCCcEEEEECCCCCcEEEEcc
Q 002047 193 IGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGPRYGHVMALVGQRYLMAIGGNDGKRPLADVWALDTAAKPYEWRKLE 272 (975)
Q Consensus 193 ~~~~~~~~~dv~~yD~~t~~~~W~~v~~~g~~P~~R~~h~~~~~~~~~lyV~GG~~g~~~~ndv~~yDl~s~~~~W~~v~ 272 (975)
. .+.+++||+.+.. .-.+++ .+-.+.+++.-++ .||+.-| .+.++.+|+.+.. .-..+.
T Consensus 105 ~------~~~v~v~D~~t~~-~~~ti~------~~~eG~glt~dg~-~L~~SdG------s~~i~~iDp~T~~-v~~~I~ 163 (262)
T 3nol_A 105 K------NGLGFVWNIRNLR-QVRSFN------YDGEGWGLTHNDQ-YLIMSDG------TPVLRFLDPESLT-PVRTIT 163 (262)
T ss_dssp S------SSEEEEEETTTCC-EEEEEE------CSSCCCCEEECSS-CEEECCS------SSEEEEECTTTCS-EEEEEE
T ss_pred e------CCEEEEEECccCc-EEEEEE------CCCCceEEecCCC-EEEEECC------CCeEEEEcCCCCe-EEEEEE
Confidence 3 4689999999864 233333 2236667765444 7888643 3579999999872 223332
Q ss_pred CCCC-CCCCcceeEEEEEeCCeEEEecCCCCCCCCccceEEeecCCCCeEEEEECCCCCCC-------CcceeeEEEe--
Q 002047 273 PEGE-GPPPCMYATASARSDGLLLLCGGRDASSVPLASAYGLAKHRDGRWEWAIAPGVSPS-------PRYQHAAVFV-- 342 (975)
Q Consensus 273 ~~~~-~P~~r~~~~a~~~~~g~lyvfGG~~~~~~~l~d~~~~~~~~~~~W~w~~~~g~~P~-------~R~~hs~v~~-- 342 (975)
.... .|..... .....+++||+--- ..+.+..+|+.+...-.|+...+..|. .-.-.+.+..
T Consensus 164 V~~~g~~~~~lN--ELe~~~G~lyan~w------~~~~I~vIDp~tG~V~~~Id~~~L~~~~~~~~~~~~vlNGIA~dp~ 235 (262)
T 3nol_A 164 VTAHGEELPELN--ELEWVDGEIFANVW------QTNKIVRIDPETGKVTGIIDLNGILAEAGPLPSPIDVLNGIAWDKE 235 (262)
T ss_dssp CEETTEECCCEE--EEEEETTEEEEEET------TSSEEEEECTTTCBEEEEEECTTGGGGSCSCCSSCCCEEEEEEETT
T ss_pred eccCCccccccc--eeEEECCEEEEEEc------cCCeEEEEECCCCcEEEEEECCcCccccccccCcCCceEEEEEcCC
Confidence 2111 0111111 12334889987422 245788888877666677887754321 1122445554
Q ss_pred CCEEEEEcCc
Q 002047 343 NARLHVSGGA 352 (975)
Q Consensus 343 ~~~L~V~GG~ 352 (975)
.++|||.|-.
T Consensus 236 ~~~lfVTGK~ 245 (262)
T 3nol_A 236 HHRLFVTGKL 245 (262)
T ss_dssp TTEEEEEETT
T ss_pred CCEEEEECCC
Confidence 4689998753
No 57
>2xmo_A LMO2642 protein; phosphodiesterase, hydrolase; 1.70A {Listeria monocytogenes}
Probab=96.38 E-value=0.0028 Score=73.09 Aligned_cols=72 Identities=18% Similarity=0.230 Sum_probs=46.8
Q ss_pred CCEEEEecCCCC--------------------------HHHHHHHHHHhCCCCCCCCccceeEEEeccccCCCCCh--HH
Q 002047 698 APIKIFGDLHGQ--------------------------FGDLMRLFDEYGSPSTAGDIAYIDYLFLGDYVDRGQHS--LE 749 (975)
Q Consensus 698 ~~i~vvGDiHG~--------------------------~~~L~~ll~~~g~~~~~~~~~~~~~vfLGDyVDRG~~s--~e 749 (975)
.+|++++|+|.. ...|.++++.+.....+ -+|++||+++.|... .+
T Consensus 40 ~~i~~iSD~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~d------~vi~~GDl~~~~~~~~~~~ 113 (443)
T 2xmo_A 40 LSMVVTTDVHYFAPSLTDNGKAFEKYVAAGDGKQLAYSDEITDAFLADVESKKTD------VLIISGDLTNNGEKTSHEE 113 (443)
T ss_dssp EEEEEECCCCBCCGGGBCCCHHHHHHHHTSTTCCGGGHHHHHHHHHHHHHHHTCS------EEEEESCCBSSCCHHHHHH
T ss_pred eEEEEEeCCCCCCccccccchhhhcccccccccccccHHHHHHHHHHHHHHcCCC------EEEECCCCCCCCCHHHHHH
Confidence 478999999974 34556666554211112 688899999988643 33
Q ss_pred HHHHHHHhhhcCCCCEEEEeccccccc
Q 002047 750 TITLLLALKVEYPNNVHLIRGNHEAAD 776 (975)
Q Consensus 750 vl~ll~~lk~~~P~~v~llrGNHE~~~ 776 (975)
+..+|..|+. .+-.++.++||||...
T Consensus 114 ~~~~l~~l~~-~~~~~~~v~GNHD~~~ 139 (443)
T 2xmo_A 114 LAKKLTQVEK-NGTQVFVVPGNHDINN 139 (443)
T ss_dssp HHHHHHHHHH-TTCEEEEECCTTTSSC
T ss_pred HHHHHHHHHh-CCCeEEEECCcCCCCC
Confidence 3344444431 2346999999999853
No 58
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=96.31 E-value=0.13 Score=54.63 Aligned_cols=181 Identities=7% Similarity=-0.069 Sum_probs=108.3
Q ss_pred CCEEEEEcCCCCCCCCCCCCCCCCCCCCcccccccccCcEEEEECCCCcEEEecCCCCCCCCccceEEEEeCCEEEEEec
Q 002047 113 GPRLILFGGATALEGNSAASGTPSSAGSAGIRLAGATADVHCYDVLTNKWSRITPFGEPPTPRAAHVATAVGTMVVIQGG 192 (975)
Q Consensus 113 ~~~lyvfGG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dv~~yD~~t~~W~~l~~~g~~P~pR~~hsa~~~~~~iyv~GG 192 (975)
++.||+-.|.. ..+..+|+.+++-..-. . +..-.+.+++..+++||+...
T Consensus 64 ~~~Ly~stG~~--------------------------g~v~~iD~~Tgkv~~~~-l---~~~~FgeGit~~g~~Ly~ltw 113 (268)
T 3nok_A 64 QGHFFESTGHQ--------------------------GTLRQLSLESAQPVWME-R---LGNIFAEGLASDGERLYQLTW 113 (268)
T ss_dssp TTEEEEEETTT--------------------------TEEEECCSSCSSCSEEE-E---CTTCCEEEEEECSSCEEEEES
T ss_pred CCEEEEEcCCC--------------------------CEEEEEECCCCcEEeEE-C---CCCcceeEEEEeCCEEEEEEc
Confidence 68999999953 23888999887643332 3 233345678888999999855
Q ss_pred cCCCCCccccEEEEEcCCCCCcEEEEEecCCCCCCCcccEEEEeCCcEEEEEcCCCCCCCCCcEEEEECCCCCcEEEEcc
Q 002047 193 IGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGPRYGHVMALVGQRYLMAIGGNDGKRPLADVWALDTAAKPYEWRKLE 272 (975)
Q Consensus 193 ~~~~~~~~~dv~~yD~~t~~~~W~~v~~~g~~P~~R~~h~~~~~~~~~lyV~GG~~g~~~~ndv~~yDl~s~~~~W~~v~ 272 (975)
. .+.+++||..+.. .-.+++ .+-.+.+++.-++ .||+.-| .+.++.+|+.+.. .-..+.
T Consensus 114 ~------~~~v~V~D~~Tl~-~~~ti~------~~~eGwGLt~Dg~-~L~vSdG------s~~l~~iDp~T~~-v~~~I~ 172 (268)
T 3nok_A 114 T------EGLLFTWSGMPPQ-RERTTR------YSGEGWGLCYWNG-KLVRSDG------GTMLTFHEPDGFA-LVGAVQ 172 (268)
T ss_dssp S------SCEEEEEETTTTE-EEEEEE------CSSCCCCEEEETT-EEEEECS------SSEEEEECTTTCC-EEEEEE
T ss_pred c------CCEEEEEECCcCc-EEEEEe------CCCceeEEecCCC-EEEEECC------CCEEEEEcCCCCe-EEEEEE
Confidence 3 4689999999863 223333 2335677776665 8999754 3589999999872 222222
Q ss_pred CCCCCCCCcceeEEEEEeCCeEEEecCCCCCCCCccceEEeecCCCCeEEEEECCCCCC--------CCcceeeEEEe--
Q 002047 273 PEGEGPPPCMYATASARSDGLLLLCGGRDASSVPLASAYGLAKHRDGRWEWAIAPGVSP--------SPRYQHAAVFV-- 342 (975)
Q Consensus 273 ~~~~~P~~r~~~~a~~~~~g~lyvfGG~~~~~~~l~d~~~~~~~~~~~W~w~~~~g~~P--------~~R~~hs~v~~-- 342 (975)
.... +.+...--...+.+|+||+--- ..+++..+|+.+...-.|+...+..| ..-.--+.+..
T Consensus 173 V~~~-g~~v~~lNeLe~~dG~lyanvw------~s~~I~vIDp~TG~V~~~Idl~~L~~~~~~~~~~~~~vlNGIA~dp~ 245 (268)
T 3nok_A 173 VKLR-GQPVELINELECANGVIYANIW------HSSDVLEIDPATGTVVGVIDASALTRAVAGQVTNPEAVLNGIAVEPG 245 (268)
T ss_dssp CEET-TEECCCEEEEEEETTEEEEEET------TCSEEEEECTTTCBEEEEEECHHHHHHHTTTCCCTTCCEEEEEECTT
T ss_pred eCCC-CcccccccccEEeCCEEEEEEC------CCCeEEEEeCCCCcEEEEEECCCCcccccccccCcCCceEEEEEcCC
Confidence 2111 1111111223345889886421 24578888887665567777763211 11122334444
Q ss_pred CCEEEEEcC
Q 002047 343 NARLHVSGG 351 (975)
Q Consensus 343 ~~~L~V~GG 351 (975)
+++|||.|-
T Consensus 246 ~~rlfVTGK 254 (268)
T 3nok_A 246 SGRIFMTGK 254 (268)
T ss_dssp TCCEEEEET
T ss_pred CCEEEEeCC
Confidence 468888874
No 59
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=96.27 E-value=1.3 Score=47.21 Aligned_cols=185 Identities=10% Similarity=0.032 Sum_probs=107.4
Q ss_pred CcEEEEECCCCcEEEecCCCCCCCCccceEEEEeCCEEEEEeccCCCCCccccEEEEEcCCCCCcEEEEEecCCCCCCCc
Q 002047 150 ADVHCYDVLTNKWSRITPFGEPPTPRAAHVATAVGTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGPRY 229 (975)
Q Consensus 150 ~dv~~yD~~t~~W~~l~~~g~~P~pR~~hsa~~~~~~iyv~GG~~~~~~~~~dv~~yD~~t~~~~W~~v~~~g~~P~~R~ 229 (975)
+.+..+|+.+++-..-.+. +......+.+..+++||+..-. .+.+++||..+.. .-..++ .+ +| .
T Consensus 44 s~v~~iD~~tg~v~~~i~l---~~~~fgeGi~~~g~~lyv~t~~------~~~v~viD~~t~~-v~~~i~-~g-~~---~ 108 (266)
T 2iwa_A 44 SSVRQVALQTGKVENIHKM---DDSYFGEGLTLLNEKLYQVVWL------KNIGFIYDRRTLS-NIKNFT-HQ-MK---D 108 (266)
T ss_dssp CEEEEEETTTCCEEEEEEC---CTTCCEEEEEEETTEEEEEETT------CSEEEEEETTTTE-EEEEEE-CC-SS---S
T ss_pred CEEEEEECCCCCEEEEEec---CCCcceEEEEEeCCEEEEEEec------CCEEEEEECCCCc-EEEEEE-CC-CC---C
Confidence 4799999999886554433 2333456778888899998643 4689999998753 122232 12 22 3
Q ss_pred ccEEEEeCCcEEEEEcCCCCCCCCCcEEEEECCCCCcEEEEccCCCCCCCCcceeEEEEEeCCeEEEecCCCCCCCCccc
Q 002047 230 GHVMALVGQRYLMAIGGNDGKRPLADVWALDTAAKPYEWRKLEPEGEGPPPCMYATASARSDGLLLLCGGRDASSVPLAS 309 (975)
Q Consensus 230 ~h~~~~~~~~~lyV~GG~~g~~~~ndv~~yDl~s~~~~W~~v~~~~~~P~~r~~~~a~~~~~g~lyvfGG~~~~~~~l~d 309 (975)
+.+.+. +++++|+.-| .+.++.+|+.+.. .-..+..... +.+...--...+.++++|+--. ..++
T Consensus 109 g~glt~-Dg~~l~vs~g------s~~l~viD~~t~~-v~~~I~Vg~~-~~p~~~~nele~~dg~lyvn~~------~~~~ 173 (266)
T 2iwa_A 109 GWGLAT-DGKILYGSDG------TSILYEIDPHTFK-LIKKHNVKYN-GHRVIRLNELEYINGEVWANIW------QTDC 173 (266)
T ss_dssp CCEEEE-CSSSEEEECS------SSEEEEECTTTCC-EEEEEECEET-TEECCCEEEEEEETTEEEEEET------TSSE
T ss_pred eEEEEE-CCCEEEEECC------CCeEEEEECCCCc-EEEEEEECCC-CcccccceeEEEECCEEEEecC------CCCe
Confidence 444544 4457998643 4689999998872 1222222111 1111111122233888987632 2357
Q ss_pred eEEeecCCCCeEEEEECCCCC--------CCCcceeeEEEe--CCEEEEEcCcCCCCCccccCCcEEEEECCCC
Q 002047 310 AYGLAKHRDGRWEWAIAPGVS--------PSPRYQHAAVFV--NARLHVSGGALGGGRMVEDSSSVAVLDTAAG 373 (975)
Q Consensus 310 ~~~~~~~~~~~W~w~~~~g~~--------P~~R~~hs~v~~--~~~L~V~GG~~~~~~~~~~~~dv~~yD~~t~ 373 (975)
+..+++.+...-.|+.+.+.. +..-.-.+.++. ++++||.|+. .+.|++.++...
T Consensus 174 V~vID~~tg~V~~~I~~~g~~~~~~~~~~~~~~v~nGIa~~~~~~~lfVTgk~---------~~~v~~i~l~~~ 238 (266)
T 2iwa_A 174 IARISAKDGTLLGWILLPNLRKKLIDEGFRDIDVLNGIAWDQENKRIFVTGKL---------WPKLFEIKLHLV 238 (266)
T ss_dssp EEEEETTTCCEEEEEECHHHHHHHHHTTCTTCCCEEEEEEETTTTEEEEEETT---------CSEEEEEEEEEC
T ss_pred EEEEECCCCcEEEEEECCCcccccccccccccCceEEEEEcCCCCEEEEECCC---------CCeEEEEEEecc
Confidence 888888776555677665321 111122445555 4689999875 345777776543
No 60
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=96.21 E-value=0.27 Score=59.70 Aligned_cols=115 Identities=15% Similarity=0.160 Sum_probs=66.5
Q ss_pred CcEEEEECCCCc--EEEecCCCCCCC-----CccceEEEEeCCEEEEEeccCCCCCccccEEEEEcCCCCCcEEEEEecC
Q 002047 150 ADVHCYDVLTNK--WSRITPFGEPPT-----PRAAHVATAVGTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQG 222 (975)
Q Consensus 150 ~dv~~yD~~t~~--W~~l~~~g~~P~-----pR~~hsa~~~~~~iyv~GG~~~~~~~~~dv~~yD~~t~~~~W~~v~~~g 222 (975)
+.++.||..+++ |+.-........ .....+.++.+++||+... ...++.+|..+....|+.-....
T Consensus 87 ~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~a~~~~~v~v~~~-------dg~l~alD~~tG~~~W~~~~~~~ 159 (677)
T 1kb0_A 87 SVVHAIDTRTGNRIWTYDPQIDRSTGFKGCCDVVNRGVALWKGKVYVGAW-------DGRLIALDAATGKEVWHQNTFEG 159 (677)
T ss_dssp GCEEEEETTTTEEEEEECCCCCGGGGGGSSSCSCCCCCEEETTEEEEECT-------TSEEEEEETTTCCEEEEEETTTT
T ss_pred CeEEEEECCCCcEEEEEcCCCCccccccccccCCCCCceEECCEEEEEcC-------CCEEEEEECCCCCEEeeecCCcC
Confidence 368999998765 887543210000 0112345567788888643 35799999998876798643101
Q ss_pred CCCCCCcccEEEEeCCcEEEEEcCCCCCCCCCcEEEEECCCCCcEEEEcc
Q 002047 223 PGPGPRYGHVMALVGQRYLMAIGGNDGKRPLADVWALDTAAKPYEWRKLE 272 (975)
Q Consensus 223 ~~P~~R~~h~~~~~~~~~lyV~GG~~g~~~~ndv~~yDl~s~~~~W~~v~ 272 (975)
.........+.++.++ .+|+..+......-..++.||..+....|+.-.
T Consensus 160 ~~~~~~~~~~p~v~~~-~v~v~~~~~~~~~~g~v~a~D~~tG~~~W~~~~ 208 (677)
T 1kb0_A 160 QKGSLTITGAPRVFKG-KVIIGNGGAEYGVRGYITAYDAETGERKWRWFS 208 (677)
T ss_dssp CCSSCBCCSCCEEETT-EEEECCBCTTTCCBCEEEEEETTTCCEEEEEES
T ss_pred cCcCcccccCcEEECC-EEEEEecccccCCCCEEEEEECCCCcEEEEecc
Confidence 0011112223334555 677754322222346799999999887897754
No 61
>3tho_B Exonuclease, putative; adenosine triphosphate, bacterial proteins, DNA breaks, DOUB stranded, DNA repair, DNA repair enzymes; HET: ADP; 2.61A {Thermotoga maritima} PDB: 3qg5_C
Probab=96.11 E-value=0.0028 Score=71.70 Aligned_cols=70 Identities=20% Similarity=0.223 Sum_probs=46.5
Q ss_pred CCEEEEecCCCCHH----------------HHHHHHHHhCCCCCCCCccceeEEEecccc-CCCCChHHHH----HHHHH
Q 002047 698 APIKIFGDLHGQFG----------------DLMRLFDEYGSPSTAGDIAYIDYLFLGDYV-DRGQHSLETI----TLLLA 756 (975)
Q Consensus 698 ~~i~vvGDiHG~~~----------------~L~~ll~~~g~~~~~~~~~~~~~vfLGDyV-DRG~~s~evl----~ll~~ 756 (975)
++|+.++|+|.... .|.++++.+.....+ -+|+.||++ |++..+.+.+ .+|..
T Consensus 1 mrilh~SD~Hlg~~~~~~~~g~~~~~~~~~~l~~l~~~~~~~~~D------~vliaGDl~hd~~~~~~~~~~~~~~~l~~ 74 (379)
T 3tho_B 1 MKILHTSDWHLGVTSWTSSRPVDRREELKKALDKVVEEAEKREVD------LILLTGDLLHSRNNPSVVALHDLLDYLKR 74 (379)
T ss_dssp CEEEEECCCCBTCEECSSSSCEECHHHHHHHHHHHHHHHHHHTCS------EEEECSCCBSCSSSCCHHHHHHHHHHHHH
T ss_pred CeEEEEcccCCCCCccccccCcChhHHHHHHHHHHHHHHHhcCCC------EEEECCCccccCCCCCHHHHHHHHHHHHH
Confidence 57899999997554 455555543221222 588899999 9887776544 34444
Q ss_pred hhhcCCCCEEEEecccccc
Q 002047 757 LKVEYPNNVHLIRGNHEAA 775 (975)
Q Consensus 757 lk~~~P~~v~llrGNHE~~ 775 (975)
|+.. -.|+++.||||..
T Consensus 75 l~~~--~~v~~i~GNHD~~ 91 (379)
T 3tho_B 75 MMRT--APVVVLPGNQDWK 91 (379)
T ss_dssp HHHH--SCEEECCCTTSCT
T ss_pred HHhC--CCEEEEcCCCccc
Confidence 4433 4699999999953
No 62
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=95.96 E-value=0.9 Score=50.66 Aligned_cols=188 Identities=14% Similarity=0.059 Sum_probs=93.4
Q ss_pred cEEEEECCCCcEEEecCCCCCCCCccceEEEEe--CCEEEEEeccCCCCCccccEEEEEcCCCCCcEEEEEecCCCCCCC
Q 002047 151 DVHCYDVLTNKWSRITPFGEPPTPRAAHVATAV--GTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGPR 228 (975)
Q Consensus 151 dv~~yD~~t~~W~~l~~~g~~P~pR~~hsa~~~--~~~iyv~GG~~~~~~~~~dv~~yD~~t~~~~W~~v~~~g~~P~~R 228 (975)
.+++||+.+.+.......+........-..+.+ ++.+|+.|+. ...+++||+.+... ...+. ....
T Consensus 145 ~i~~~d~~~g~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~s~~~------d~~v~~~d~~~~~~-~~~~~-----~~~~ 212 (433)
T 3bws_A 145 GMDVLDINSGQTVRLSPPEKYKKKLGFVETISIPEHNELWVSQMQ------ANAVHVFDLKTLAY-KATVD-----LTGK 212 (433)
T ss_dssp SEEEEETTTCCEEEECCCHHHHTTCCEEEEEEEGGGTEEEEEEGG------GTEEEEEETTTCCE-EEEEE-----CSSS
T ss_pred eEEEEECCCCeEeeecCcccccccCCceeEEEEcCCCEEEEEECC------CCEEEEEECCCceE-EEEEc-----CCCC
Confidence 589999998887765332110111111122233 5688888764 35799999987641 22222 1111
Q ss_pred cccEEEEe-CCcEEEEEcCCCCCCCCCcEEEEECCCCCcEEEEccCCCCCCCCcceeEEEEEeCCeEEEecCCCCCCCC-
Q 002047 229 YGHVMALV-GQRYLMAIGGNDGKRPLADVWALDTAAKPYEWRKLEPEGEGPPPCMYATASARSDGLLLLCGGRDASSVP- 306 (975)
Q Consensus 229 ~~h~~~~~-~~~~lyV~GG~~g~~~~ndv~~yDl~s~~~~W~~v~~~~~~P~~r~~~~a~~~~~g~lyvfGG~~~~~~~- 306 (975)
.-.+++.. +++.+|+.++.++ .+++||+.+. +....-.... .....+...+++.+++++.......
T Consensus 213 ~~~~~~~~~~~~~l~~~~~~~~-----~i~~~d~~~~--~~~~~~~~~~-----~~~~~~~~~~g~~l~~~~~~~~~~~~ 280 (433)
T 3bws_A 213 WSKILLYDPIRDLVYCSNWISE-----DISVIDRKTK--LEIRKTDKIG-----LPRGLLLSKDGKELYIAQFSASNQES 280 (433)
T ss_dssp SEEEEEEETTTTEEEEEETTTT-----EEEEEETTTT--EEEEECCCCS-----EEEEEEECTTSSEEEEEEEESCTTCS
T ss_pred CeeEEEEcCCCCEEEEEecCCC-----cEEEEECCCC--cEEEEecCCC-----CceEEEEcCCCCEEEEEECCCCcccc
Confidence 22233333 3446777765543 7999999887 5544322211 1222333345655555554332211
Q ss_pred -ccceEEeecCCCCeEEEEECCCCCCCCcceeeEEEe--CCEEEEEcCcCCCCCccccCCcEEEEECCCCeEEE
Q 002047 307 -LASAYGLAKHRDGRWEWAIAPGVSPSPRYQHAAVFV--NARLHVSGGALGGGRMVEDSSSVAVLDTAAGVWCD 377 (975)
Q Consensus 307 -l~d~~~~~~~~~~~W~w~~~~g~~P~~R~~hs~v~~--~~~L~V~GG~~~~~~~~~~~~dv~~yD~~t~~W~~ 377 (975)
-..++.++.... ........ +..-..+++. +..+|+.++. ...+.+||+.+.+-..
T Consensus 281 ~dg~i~~~d~~~~-~~~~~~~~-----~~~~~~~~~~~~g~~l~~~~~~---------~~~v~v~d~~~~~~~~ 339 (433)
T 3bws_A 281 GGGRLGIYSMDKE-KLIDTIGP-----PGNKRHIVSGNTENKIYVSDMC---------CSKIEVYDLKEKKVQK 339 (433)
T ss_dssp CCEEEEEEETTTT-EEEEEEEE-----EECEEEEEECSSTTEEEEEETT---------TTEEEEEETTTTEEEE
T ss_pred CCCeEEEEECCCC-cEEeeccC-----CCCcceEEECCCCCEEEEEecC---------CCEEEEEECCCCcEEE
Confidence 234555554433 22222110 1111123332 3368887654 2358999999876443
No 63
>4fbk_A DNA repair and telomere maintenance protein NBS1, protein RAD32 chimeric protein; DNA double-strand break repair, nuclease; HET: DNA; 2.38A {Schizosaccharomyces pombe} PDB: 4fbq_A*
Probab=95.87 E-value=0.0062 Score=69.97 Aligned_cols=53 Identities=19% Similarity=0.154 Sum_probs=38.0
Q ss_pred CCEEEEecCCCC------------HHHHHHHHHHhCCCCCCCCccceeEEEeccccCCCCChHHHHHHHHH
Q 002047 698 APIKIFGDLHGQ------------FGDLMRLFDEYGSPSTAGDIAYIDYLFLGDYVDRGQHSLETITLLLA 756 (975)
Q Consensus 698 ~~i~vvGDiHG~------------~~~L~~ll~~~g~~~~~~~~~~~~~vfLGDyVDRG~~s~evl~ll~~ 756 (975)
++|+.++|+|-. +..|.++++.+.....+ -+|+.||++|++.-+.+++..++.
T Consensus 77 mrilhiSDlHLG~~~~~~~~~~d~~~~l~~lv~~~~~~~~D------~VliaGDLfd~~~ps~~a~~~~~~ 141 (472)
T 4fbk_A 77 IRILISSDPHVGYGEKDPVRGNDSFVSFNEILEIARERDVD------MILLGGDIFHDNKPSRKALYQALR 141 (472)
T ss_dssp EEEEEECCCCBTTTTTCTTTTTHHHHHHHHHHHHHHHTTCS------EEEECSCSBSSSSCCHHHHHHHHH
T ss_pred eEEEEEecccCCCcccCcccchhHHHHHHHHHHHHHhcCCC------EEEEcCccccCCCCCHHHHHHHHH
Confidence 468999999964 33566676665432222 688999999999999887765443
No 64
>3t1i_A Double-strand break repair protein MRE11A; DNA repair, MRN complex, metallophosphatase, exonuclease, endonuclease, RAD50, NBS1, hydrolase; 3.00A {Homo sapiens}
Probab=95.80 E-value=0.0071 Score=69.13 Aligned_cols=54 Identities=22% Similarity=0.189 Sum_probs=37.8
Q ss_pred CCEEEEecCCCCH------------HHHHHHHHHhCCCCCCCCccceeEEEeccccCCCCChHHHHHHHHHh
Q 002047 698 APIKIFGDLHGQF------------GDLMRLFDEYGSPSTAGDIAYIDYLFLGDYVDRGQHSLETITLLLAL 757 (975)
Q Consensus 698 ~~i~vvGDiHG~~------------~~L~~ll~~~g~~~~~~~~~~~~~vfLGDyVDRG~~s~evl~ll~~l 757 (975)
++|+.++|+|-.. ..|.++++.+.....+ -+|+.||++|++..+.+++..++.+
T Consensus 33 mrilhiSDlHLg~~~~~~~~~~d~~~~l~~ll~~~~~~~~D------~VliaGDlfd~~~~~~~~~~~~~~~ 98 (431)
T 3t1i_A 33 FKILVATDIHLGFMEKDAVRGNDTFVTLDEILRLAQENEVD------FILLGGDLFHENKPSRKTLHTCLEL 98 (431)
T ss_dssp EEEEEECCCCBTTTSSCTTTTTHHHHHHHHHHHHHHHTTCS------EEEECSCCBSSSSCCHHHHHHHHHH
T ss_pred EEEEEEeccCCCCcccccchhhhHHHHHHHHHHHHhhcCCC------EEEEcCccccCCCCCHHHHHHHHHH
Confidence 5799999999532 3556666554332222 6889999999999888877655554
No 65
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=95.80 E-value=2.2 Score=45.09 Aligned_cols=206 Identities=8% Similarity=0.044 Sum_probs=120.1
Q ss_pred eEEEEeCCEEEEEeccCCCCCccccEEEEEcCCCCCcEEEEEecCCCCCCCcccEEEEeCCcEEEEEcCCCCCCCCCcEE
Q 002047 178 HVATAVGTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGPRYGHVMALVGQRYLMAIGGNDGKRPLADVW 257 (975)
Q Consensus 178 hsa~~~~~~iyv~GG~~~~~~~~~dv~~yD~~t~~~~W~~v~~~g~~P~~R~~h~~~~~~~~~lyV~GG~~g~~~~ndv~ 257 (975)
.+....++.+|+..|..+ .+.+.++|+.+.. .-.++ +++..-++.+++..++ +||+.... -+.++
T Consensus 46 qGL~~~~~~LyestG~~g----~S~v~~vD~~Tgk-v~~~~----~l~~~~FgeGit~~g~-~ly~ltw~-----~~~v~ 110 (262)
T 3nol_A 46 EGFFYRNGYFYESTGLNG----RSSIRKVDIESGK-TLQQI----ELGKRYFGEGISDWKD-KIVGLTWK-----NGLGF 110 (262)
T ss_dssp EEEEEETTEEEEEEEETT----EEEEEEECTTTCC-EEEEE----ECCTTCCEEEEEEETT-EEEEEESS-----SSEEE
T ss_pred ceEEEECCEEEEECCCCC----CceEEEEECCCCc-EEEEE----ecCCccceeEEEEeCC-EEEEEEee-----CCEEE
Confidence 455555789999988632 3578999999874 22233 3455556777777777 89998653 36899
Q ss_pred EEECCCCCcEEE-EccCCCCCCCCcceeEEEEEeCCeEEEecCCCCCCCCccceEEeecCCCCeEEEEECCCC-CCCCcc
Q 002047 258 ALDTAAKPYEWR-KLEPEGEGPPPCMYATASARSDGLLLLCGGRDASSVPLASAYGLAKHRDGRWEWAIAPGV-SPSPRY 335 (975)
Q Consensus 258 ~yDl~s~~~~W~-~v~~~~~~P~~r~~~~a~~~~~g~lyvfGG~~~~~~~l~d~~~~~~~~~~~W~w~~~~g~-~P~~R~ 335 (975)
+||+.+. +-. .+...+ ..-+++..+++||+.-| .+.++.+|+.+...-.-+.+... .|....
T Consensus 111 v~D~~t~--~~~~ti~~~~-------eG~glt~dg~~L~~SdG-------s~~i~~iDp~T~~v~~~I~V~~~g~~~~~l 174 (262)
T 3nol_A 111 VWNIRNL--RQVRSFNYDG-------EGWGLTHNDQYLIMSDG-------TPVLRFLDPESLTPVRTITVTAHGEELPEL 174 (262)
T ss_dssp EEETTTC--CEEEEEECSS-------CCCCEEECSSCEEECCS-------SSEEEEECTTTCSEEEEEECEETTEECCCE
T ss_pred EEECccC--cEEEEEECCC-------CceEEecCCCEEEEECC-------CCeEEEEcCCCCeEEEEEEeccCCcccccc
Confidence 9999887 322 222211 22345566778888754 13577787776544444444311 111111
Q ss_pred eeeEEEeCCEEEEEcCcCCCCCccccCCcEEEEECCCCeEEEcccCcC-CCCCCCCccccCCCCCccCCCccceeEEEEE
Q 002047 336 QHAAVFVNARLHVSGGALGGGRMVEDSSSVAVLDTAAGVWCDTKSVVT-SPRTGRYSADAAGGDAAVELTRRCRHAAAAV 414 (975)
Q Consensus 336 ~hs~v~~~~~L~V~GG~~~~~~~~~~~~dv~~yD~~t~~W~~v~~~~~-~p~~~~~~~~~~~~~~~~~p~~R~~hsa~~~ 414 (975)
. -+...+++||+-- ...+.|.+.|+++++=...-.+.. .+... ...+..-.-.+.|..
T Consensus 175 N-ELe~~~G~lyan~---------w~~~~I~vIDp~tG~V~~~Id~~~L~~~~~-----------~~~~~~~vlNGIA~d 233 (262)
T 3nol_A 175 N-ELEWVDGEIFANV---------WQTNKIVRIDPETGKVTGIIDLNGILAEAG-----------PLPSPIDVLNGIAWD 233 (262)
T ss_dssp E-EEEEETTEEEEEE---------TTSSEEEEECTTTCBEEEEEECTTGGGGSC-----------SCCSSCCCEEEEEEE
T ss_pred c-eeEEECCEEEEEE---------ccCCeEEEEECCCCcEEEEEECCcCccccc-----------cccCcCCceEEEEEc
Confidence 1 2445588988631 125679999999986443332210 00000 000112233566665
Q ss_pred --CCEEEEEcCCCCCCCccceEeeeccc
Q 002047 415 --GDLIFIYGGLRGGVLLDDLLVAEDLA 440 (975)
Q Consensus 415 --~~~LyV~GG~~~~~~l~Dv~~ld~~~ 440 (975)
+++|||.|- ++..+|.+.+.+
T Consensus 234 p~~~~lfVTGK-----~Wp~~~ev~~~~ 256 (262)
T 3nol_A 234 KEHHRLFVTGK-----LWPKVFEITLTQ 256 (262)
T ss_dssp TTTTEEEEEET-----TCSEEEEEEEEE
T ss_pred CCCCEEEEECC-----CCCceEEEEEec
Confidence 579999984 577788777655
No 66
>4fbw_A DNA repair protein RAD32; DNA double-strand break repair, nuclease, hydrolase; HET: DNA; 2.20A {Schizosaccharomyces pombe} PDB: 4fcx_B*
Probab=95.72 E-value=0.0094 Score=67.81 Aligned_cols=53 Identities=19% Similarity=0.154 Sum_probs=38.3
Q ss_pred CCEEEEecCCCC------------HHHHHHHHHHhCCCCCCCCccceeEEEeccccCCCCChHHHHHHHHH
Q 002047 698 APIKIFGDLHGQ------------FGDLMRLFDEYGSPSTAGDIAYIDYLFLGDYVDRGQHSLETITLLLA 756 (975)
Q Consensus 698 ~~i~vvGDiHG~------------~~~L~~ll~~~g~~~~~~~~~~~~~vfLGDyVDRG~~s~evl~ll~~ 756 (975)
++++.++|+|-. +..|.++++.+.....+ -+|+.||++|++.-+.+++..++.
T Consensus 14 mrilhiSDlHLg~~~~~~~~~~d~~~~l~~lv~~~~~~~~D------~VliaGDLfd~~~p~~~~~~~~~~ 78 (417)
T 4fbw_A 14 IRILISSDPHVGYGEKDPVRGNDSFVSFNEILEIARERDVD------MILLGGDIFHDNKPSRKALYQALR 78 (417)
T ss_dssp EEEEEECCCCBTTTTTCTTTTTHHHHHHHHHHHHHHHTTCS------EEEECSCCBSSSSCCHHHHHHHHH
T ss_pred eEEEEEEcCCCCCcccccccchhHHHHHHHHHHHHHhcCCC------EEEEcCccccCCCCCHHHHHHHHH
Confidence 579999999975 34566677665432222 688999999999999887765443
No 67
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=95.70 E-value=2.4 Score=45.04 Aligned_cols=209 Identities=11% Similarity=0.021 Sum_probs=117.6
Q ss_pred eEEEEeC-CEEEEEeccCCCCCccccEEEEEcCCCCCcEEEEEecCCCCCCCcccEEEEeCCcEEEEEcCCCCCCCCCcE
Q 002047 178 HVATAVG-TMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGPRYGHVMALVGQRYLMAIGGNDGKRPLADV 256 (975)
Q Consensus 178 hsa~~~~-~~iyv~GG~~~~~~~~~dv~~yD~~t~~~~W~~v~~~g~~P~~R~~h~~~~~~~~~lyV~GG~~g~~~~ndv 256 (975)
|+++..+ +.+|+..|.. ..+.+.++|+.+.. -..-- +++....+.+++..++ +||+..-. -+.+
T Consensus 24 ~Gl~~~~dg~Lyvstg~~----~~s~v~~iD~~tg~--v~~~i---~l~~~~fgeGi~~~g~-~lyv~t~~-----~~~v 88 (266)
T 2iwa_A 24 QGLVYAENDTLFESTGLY----GRSSVRQVALQTGK--VENIH---KMDDSYFGEGLTLLNE-KLYQVVWL-----KNIG 88 (266)
T ss_dssp EEEEECSTTEEEEEECST----TTCEEEEEETTTCC--EEEEE---ECCTTCCEEEEEEETT-EEEEEETT-----CSEE
T ss_pred ccEEEeCCCeEEEECCCC----CCCEEEEEECCCCC--EEEEE---ecCCCcceEEEEEeCC-EEEEEEec-----CCEE
Confidence 6666666 6999987742 13679999999874 22222 2344445667777766 89998543 3689
Q ss_pred EEEECCCCCcEEEEccCCCCCCCCcceeEEEEEeCCeEEEecCCCCCCCCccceEEeecCCCCeEEEEECCCC-CCCCcc
Q 002047 257 WALDTAAKPYEWRKLEPEGEGPPPCMYATASARSDGLLLLCGGRDASSVPLASAYGLAKHRDGRWEWAIAPGV-SPSPRY 335 (975)
Q Consensus 257 ~~yDl~s~~~~W~~v~~~~~~P~~r~~~~a~~~~~g~lyvfGG~~~~~~~l~d~~~~~~~~~~~W~w~~~~g~-~P~~R~ 335 (975)
++||+.+. +=..--+.+ .| ...+.+..++++|+.-| .+.++.+++.+...-.-+.+... .|..+-
T Consensus 89 ~viD~~t~--~v~~~i~~g-~~----~g~glt~Dg~~l~vs~g-------s~~l~viD~~t~~v~~~I~Vg~~~~p~~~~ 154 (266)
T 2iwa_A 89 FIYDRRTL--SNIKNFTHQ-MK----DGWGLATDGKILYGSDG-------TSILYEIDPHTFKLIKKHNVKYNGHRVIRL 154 (266)
T ss_dssp EEEETTTT--EEEEEEECC-SS----SCCEEEECSSSEEEECS-------SSEEEEECTTTCCEEEEEECEETTEECCCE
T ss_pred EEEECCCC--cEEEEEECC-CC----CeEEEEECCCEEEEECC-------CCeEEEEECCCCcEEEEEEECCCCcccccc
Confidence 99999887 322211111 11 12335556788998754 24577777766543333343321 111121
Q ss_pred eeeEEEeCCEEEEEcCcCCCCCccccCCcEEEEECCCCe---EEEcccCcCCCCCCCCccccCCCCCccCCCccceeEEE
Q 002047 336 QHAAVFVNARLHVSGGALGGGRMVEDSSSVAVLDTAAGV---WCDTKSVVTSPRTGRYSADAAGGDAAVELTRRCRHAAA 412 (975)
Q Consensus 336 ~hs~v~~~~~L~V~GG~~~~~~~~~~~~dv~~yD~~t~~---W~~v~~~~~~p~~~~~~~~~~~~~~~~~p~~R~~hsa~ 412 (975)
..+...++++|+--. ..+.|.+.|+++++ |..+..+.... . ....+..-.-.+.+
T Consensus 155 -nele~~dg~lyvn~~---------~~~~V~vID~~tg~V~~~I~~~g~~~~~--------~----~~~~~~~~v~nGIa 212 (266)
T 2iwa_A 155 -NELEYINGEVWANIW---------QTDCIARISAKDGTLLGWILLPNLRKKL--------I----DEGFRDIDVLNGIA 212 (266)
T ss_dssp -EEEEEETTEEEEEET---------TSSEEEEEETTTCCEEEEEECHHHHHHH--------H----HTTCTTCCCEEEEE
T ss_pred -eeEEEECCEEEEecC---------CCCeEEEEECCCCcEEEEEECCCccccc--------c----cccccccCceEEEE
Confidence 233444888887522 15679999999985 43333210000 0 00000011225555
Q ss_pred EE--CCEEEEEcCCCCCCCccceEeeeccccc
Q 002047 413 AV--GDLIFIYGGLRGGVLLDDLLVAEDLAAA 442 (975)
Q Consensus 413 ~~--~~~LyV~GG~~~~~~l~Dv~~ld~~~~~ 442 (975)
.. ++++||.|+. .+.++.+++....
T Consensus 213 ~~~~~~~lfVTgk~-----~~~v~~i~l~~~~ 239 (266)
T 2iwa_A 213 WDQENKRIFVTGKL-----WPKLFEIKLHLVR 239 (266)
T ss_dssp EETTTTEEEEEETT-----CSEEEEEEEEECC
T ss_pred EcCCCCEEEEECCC-----CCeEEEEEEeccc
Confidence 55 5699999985 4677777776643
No 68
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=95.59 E-value=0.76 Score=54.55 Aligned_cols=114 Identities=12% Similarity=0.143 Sum_probs=65.1
Q ss_pred CcEEEEEC-CCC--cEEEecCCCCCCC--C---ccceEEEEeCCEEEEEeccCCCCCccccEEEEEcCCCCCcEEEEEec
Q 002047 150 ADVHCYDV-LTN--KWSRITPFGEPPT--P---RAAHVATAVGTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQ 221 (975)
Q Consensus 150 ~dv~~yD~-~t~--~W~~l~~~g~~P~--p---R~~hsa~~~~~~iyv~GG~~~~~~~~~dv~~yD~~t~~~~W~~v~~~ 221 (975)
..+++||. .++ .|+.-........ . ....+.++.+++||+... ...++.+|..+....|+.-...
T Consensus 73 ~~v~AlD~~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~-------dg~l~alD~~tG~~~W~~~~~~ 145 (571)
T 2ad6_A 73 NNTYALNLNDPGKIVWQHKPKQDASTKAVMCCDVVDRGLAYGAGQIVKKQA-------NGHLLALDAKTGKINWEVEVCD 145 (571)
T ss_dssp TCEEEEETTCTTSEEEEECCCCCGGGGGGCTTCSCCCCCEEETTEEEEECT-------TSEEEEEETTTCCEEEEEECCC
T ss_pred CEEEEEeCCCCccEEEEEcCCCCccccccccccccccccEEECCEEEEEeC-------CCEEEEEECCCCCEEEEecCCC
Confidence 36899998 765 4887533210000 0 112345567888888743 2469999998877679864311
Q ss_pred CCCCCCCcccEEEEeCCcEEEEEcCCCCCCCCCcEEEEECCCCCcEEEEcc
Q 002047 222 GPGPGPRYGHVMALVGQRYLMAIGGNDGKRPLADVWALDTAAKPYEWRKLE 272 (975)
Q Consensus 222 g~~P~~R~~h~~~~~~~~~lyV~GG~~g~~~~ndv~~yDl~s~~~~W~~v~ 272 (975)
.........+-++.++ .+|+..+......-..++.||..+....|+.-.
T Consensus 146 -~~~~~~~~~~P~v~~g-~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~~~ 194 (571)
T 2ad6_A 146 -PKVGSTLTQAPFVAKD-TVLMGCSGAELGVRGAVNAFDLKTGELKWRAFA 194 (571)
T ss_dssp -GGGTCBCCSCCEEETT-EEEEECBCGGGTCCCEEEEEETTTCCEEEEEES
T ss_pred -CCccceeccCCEEECC-EEEEEecCCccCCCCEEEEEECCCCcEEEEEcc
Confidence 0000011222334565 777754321111235799999999888897643
No 69
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=95.17 E-value=1.6 Score=49.18 Aligned_cols=190 Identities=13% Similarity=0.028 Sum_probs=95.0
Q ss_pred CcEEEEECCCCcEEEecCCCCCCCCccceEEEEe-CCEEEEEeccCCCCCccccEEEEEcCCCCCcEEEEEecCCCCCCC
Q 002047 150 ADVHCYDVLTNKWSRITPFGEPPTPRAAHVATAV-GTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGPR 228 (975)
Q Consensus 150 ~dv~~yD~~t~~W~~l~~~g~~P~pR~~hsa~~~-~~~iyv~GG~~~~~~~~~dv~~yD~~t~~~~W~~v~~~g~~P~~R 228 (975)
..++.+|+....-..+... ... -.+.+.. +++.+++++.... ...++++|+.+.. ...+. ..+ .
T Consensus 159 ~~i~i~d~~g~~~~~l~~~----~~~-v~~~~~Spdg~~la~~s~~~~---~~~i~~~d~~tg~--~~~l~---~~~--~ 223 (415)
T 2hqs_A 159 YELRVSDYDGYNQFVVHRS----PQP-LMSPAWSPDGSKLAYVTFESG---RSALVIQTLANGA--VRQVA---SFP--R 223 (415)
T ss_dssp EEEEEEETTSCSCEEEEEE----SSC-EEEEEECTTSSEEEEEECTTS---SCEEEEEETTTCC--EEEEE---CCS--S
T ss_pred ceEEEEcCCCCCCEEEeCC----CCc-ceeeEEcCCCCEEEEEEecCC---CcEEEEEECCCCc--EEEee---cCC--C
Confidence 5789999887655555322 111 1122222 4455555553221 2589999998864 55444 111 1
Q ss_pred cccEEEEe-CCcEEEEEcCCCCCCCCCcEEEEECCCCCcEEEEccCCCCCCCCcceeEEEEEeCCeEEEecCCCCCCCCc
Q 002047 229 YGHVMALV-GQRYLMAIGGNDGKRPLADVWALDTAAKPYEWRKLEPEGEGPPPCMYATASARSDGLLLLCGGRDASSVPL 307 (975)
Q Consensus 229 ~~h~~~~~-~~~~lyV~GG~~g~~~~ndv~~yDl~s~~~~W~~v~~~~~~P~~r~~~~a~~~~~g~lyvfGG~~~~~~~l 307 (975)
.-.+.+.- ++++|++.+..++ ...+|.+|+.+. +...+..... .........+++.+++++.... .
T Consensus 224 ~~~~~~~spdg~~la~~~~~~g---~~~i~~~d~~~~--~~~~l~~~~~-----~~~~~~~spdg~~l~~~s~~~g---~ 290 (415)
T 2hqs_A 224 HNGAPAFSPDGSKLAFALSKTG---SLNLYVMDLASG--QIRQVTDGRS-----NNTEPTWFPDSQNLAFTSDQAG---R 290 (415)
T ss_dssp CEEEEEECTTSSEEEEEECTTS---SCEEEEEETTTC--CEEECCCCSS-----CEEEEEECTTSSEEEEEECTTS---S
T ss_pred cccCEEEcCCCCEEEEEEecCC---CceEEEEECCCC--CEEeCcCCCC-----cccceEECCCCCEEEEEECCCC---C
Confidence 12223233 3334655554443 247999999988 6666544321 1222233346665555543211 2
Q ss_pred cceEEeecCCCCeEEEEECCCCCCCCcceeeEEEe-CCEEEEEcCcCCCCCccccCCcEEEEECCCCeEEEcc
Q 002047 308 ASAYGLAKHRDGRWEWAIAPGVSPSPRYQHAAVFV-NARLHVSGGALGGGRMVEDSSSVAVLDTAAGVWCDTK 379 (975)
Q Consensus 308 ~d~~~~~~~~~~~W~w~~~~g~~P~~R~~hs~v~~-~~~L~V~GG~~~~~~~~~~~~dv~~yD~~t~~W~~v~ 379 (975)
..+|.++.... .. ..... ......+.++. +++.+++++.... ...|+++|+.+.+...+.
T Consensus 291 ~~i~~~d~~~~-~~--~~l~~---~~~~~~~~~~spdG~~l~~~~~~~g------~~~i~~~d~~~~~~~~l~ 351 (415)
T 2hqs_A 291 PQVYKVNINGG-AP--QRITW---EGSQNQDADVSSDGKFMVMVSSNGG------QQHIAKQDLATGGVQVLS 351 (415)
T ss_dssp CEEEEEETTSS-CC--EECCC---SSSEEEEEEECTTSSEEEEEEECSS------CEEEEEEETTTCCEEECC
T ss_pred cEEEEEECCCC-CE--EEEec---CCCcccCeEECCCCCEEEEEECcCC------ceEEEEEECCCCCEEEec
Confidence 35666655433 11 12211 11222223332 4555555554321 246999999999886554
No 70
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=94.95 E-value=2 Score=47.08 Aligned_cols=178 Identities=17% Similarity=0.172 Sum_probs=91.9
Q ss_pred CcEEEEECCCCcEEEecCCCCCCCCccceEEEEe--CCEEEEEeccCCCCCccccEEEEEcCCCCCcEEEEEecCCCCCC
Q 002047 150 ADVHCYDVLTNKWSRITPFGEPPTPRAAHVATAV--GTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGP 227 (975)
Q Consensus 150 ~dv~~yD~~t~~W~~l~~~g~~P~pR~~hsa~~~--~~~iyv~GG~~~~~~~~~dv~~yD~~t~~~~W~~v~~~g~~P~~ 227 (975)
+.+++||+.+++-...-... ..-++++.. +..||+.|+. ...+.+||+.+.. ....... +
T Consensus 12 ~~v~v~d~~~~~~~~~~~~~-----~~~~~~~~s~dg~~l~~~~~~------d~~i~v~d~~~~~--~~~~~~~---~-- 73 (391)
T 1l0q_A 12 DNISVIDVTSNKVTATIPVG-----SNPMGAVISPDGTKVYVANAH------SNDVSIIDTATNN--VIATVPA---G-- 73 (391)
T ss_dssp TEEEEEETTTTEEEEEEECS-----SSEEEEEECTTSSEEEEEEGG------GTEEEEEETTTTE--EEEEEEC---S--
T ss_pred CEEEEEECCCCeEEEEeecC-----CCcceEEECCCCCEEEEECCC------CCeEEEEECCCCe--EEEEEEC---C--
Confidence 47889999887655443221 112333333 3367777754 3579999998763 3222211 1
Q ss_pred CcccEEEEe-CCcEEEEEcCCCCCCCCCcEEEEECCCCCcEEEEccCCCCCCCCcceeEEEEEeCC-eEEEecCCCCCCC
Q 002047 228 RYGHVMALV-GQRYLMAIGGNDGKRPLADVWALDTAAKPYEWRKLEPEGEGPPPCMYATASARSDG-LLLLCGGRDASSV 305 (975)
Q Consensus 228 R~~h~~~~~-~~~~lyV~GG~~g~~~~ndv~~yDl~s~~~~W~~v~~~~~~P~~r~~~~a~~~~~g-~lyvfGG~~~~~~ 305 (975)
..-.+++.. +++.||+.|..+ ..+++||+.+. +....-.... .....+...++ .+|+.++.++
T Consensus 74 ~~v~~~~~spdg~~l~~~~~~~-----~~v~v~d~~~~--~~~~~~~~~~-----~~~~~~~s~dg~~l~~~~~~~~--- 138 (391)
T 1l0q_A 74 SSPQGVAVSPDGKQVYVTNMAS-----STLSVIDTTSN--TVAGTVKTGK-----SPLGLALSPDGKKLYVTNNGDK--- 138 (391)
T ss_dssp SSEEEEEECTTSSEEEEEETTT-----TEEEEEETTTT--EEEEEEECSS-----SEEEEEECTTSSEEEEEETTTT---
T ss_pred CCccceEECCCCCEEEEEECCC-----CEEEEEECCCC--eEEEEEeCCC-----CcceEEECCCCCEEEEEeCCCC---
Confidence 122333333 344577765443 46999999988 4443322222 11222233344 5667765432
Q ss_pred CccceEEeecCCCCeEEEEECCCCCCCCcceeeEEEe--CCEEEEEcCcCCCCCccccCCcEEEEECCCCeEEEc
Q 002047 306 PLASAYGLAKHRDGRWEWAIAPGVSPSPRYQHAAVFV--NARLHVSGGALGGGRMVEDSSSVAVLDTAAGVWCDT 378 (975)
Q Consensus 306 ~l~d~~~~~~~~~~~W~w~~~~g~~P~~R~~hs~v~~--~~~L~V~GG~~~~~~~~~~~~dv~~yD~~t~~W~~v 378 (975)
.++.++... ++..+....+. .-..+++. +..||+.++. ...|++||+.+.+....
T Consensus 139 ---~v~~~d~~~-~~~~~~~~~~~-----~~~~~~~~~dg~~l~~~~~~---------~~~v~~~d~~~~~~~~~ 195 (391)
T 1l0q_A 139 ---TVSVINTVT-KAVINTVSVGR-----SPKGIAVTPDGTKVYVANFD---------SMSISVIDTVTNSVIDT 195 (391)
T ss_dssp ---EEEEEETTT-TEEEEEEECCS-----SEEEEEECTTSSEEEEEETT---------TTEEEEEETTTTEEEEE
T ss_pred ---EEEEEECCC-CcEEEEEecCC-----CcceEEECCCCCEEEEEeCC---------CCEEEEEECCCCeEEEE
Confidence 455555443 33333322221 11333333 3467777653 23489999998865543
No 71
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=94.75 E-value=1.9 Score=47.11 Aligned_cols=178 Identities=16% Similarity=0.123 Sum_probs=89.3
Q ss_pred CcEEEEECCCCcEEEecCCCCCCCCccceEEEEe--CCEEEEEeccCCCCCccccEEEEEcCCCCCcEEEEEecCCCCCC
Q 002047 150 ADVHCYDVLTNKWSRITPFGEPPTPRAAHVATAV--GTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGP 227 (975)
Q Consensus 150 ~dv~~yD~~t~~W~~l~~~g~~P~pR~~hsa~~~--~~~iyv~GG~~~~~~~~~dv~~yD~~t~~~~W~~v~~~g~~P~~ 227 (975)
..++.||+.+++....-..+ . .-.+++.. ++.||+.|.. ...+++||+.+.. ....... .
T Consensus 54 ~~i~v~d~~~~~~~~~~~~~---~--~v~~~~~spdg~~l~~~~~~------~~~v~v~d~~~~~--~~~~~~~-----~ 115 (391)
T 1l0q_A 54 NDVSIIDTATNNVIATVPAG---S--SPQGVAVSPDGKQVYVTNMA------SSTLSVIDTTSNT--VAGTVKT-----G 115 (391)
T ss_dssp TEEEEEETTTTEEEEEEECS---S--SEEEEEECTTSSEEEEEETT------TTEEEEEETTTTE--EEEEEEC-----S
T ss_pred CeEEEEECCCCeEEEEEECC---C--CccceEECCCCCEEEEEECC------CCEEEEEECCCCe--EEEEEeC-----C
Confidence 47889999888765543331 1 22233333 3356666543 3579999998863 3222211 1
Q ss_pred CcccEEEEe-CCcEEEEEcCCCCCCCCCcEEEEECCCCCcEEEEccCCCCCCCCcceeEEEEEeCC-eEEEecCCCCCCC
Q 002047 228 RYGHVMALV-GQRYLMAIGGNDGKRPLADVWALDTAAKPYEWRKLEPEGEGPPPCMYATASARSDG-LLLLCGGRDASSV 305 (975)
Q Consensus 228 R~~h~~~~~-~~~~lyV~GG~~g~~~~ndv~~yDl~s~~~~W~~v~~~~~~P~~r~~~~a~~~~~g-~lyvfGG~~~~~~ 305 (975)
..-..++.. +++.||+.++.+ +.+++||+.+. +....-..... . ...+...++ .+|+.++.+
T Consensus 116 ~~~~~~~~s~dg~~l~~~~~~~-----~~v~~~d~~~~--~~~~~~~~~~~----~-~~~~~~~dg~~l~~~~~~~---- 179 (391)
T 1l0q_A 116 KSPLGLALSPDGKKLYVTNNGD-----KTVSVINTVTK--AVINTVSVGRS----P-KGIAVTPDGTKVYVANFDS---- 179 (391)
T ss_dssp SSEEEEEECTTSSEEEEEETTT-----TEEEEEETTTT--EEEEEEECCSS----E-EEEEECTTSSEEEEEETTT----
T ss_pred CCcceEEECCCCCEEEEEeCCC-----CEEEEEECCCC--cEEEEEecCCC----c-ceEEECCCCCEEEEEeCCC----
Confidence 122333333 334677777544 37999999888 55444332221 1 222223334 666766543
Q ss_pred CccceEEeecCCCCeEEEEECCCCCCCCcceeeEEEe-CC-EEEEEcCcCCCCCccccCCcEEEEECCCCeEE
Q 002047 306 PLASAYGLAKHRDGRWEWAIAPGVSPSPRYQHAAVFV-NA-RLHVSGGALGGGRMVEDSSSVAVLDTAAGVWC 376 (975)
Q Consensus 306 ~l~d~~~~~~~~~~~W~w~~~~g~~P~~R~~hs~v~~-~~-~L~V~GG~~~~~~~~~~~~dv~~yD~~t~~W~ 376 (975)
..++.++.... ........ ...-.++++. ++ .||+.+ ... ....|.+||+.+.+-.
T Consensus 180 --~~v~~~d~~~~-~~~~~~~~-----~~~~~~~~~~~~g~~l~~~~-~~~------~~~~v~~~d~~~~~~~ 237 (391)
T 1l0q_A 180 --MSISVIDTVTN-SVIDTVKV-----EAAPSGIAVNPEGTKAYVTN-VDK------YFNTVSMIDTGTNKIT 237 (391)
T ss_dssp --TEEEEEETTTT-EEEEEEEC-----SSEEEEEEECTTSSEEEEEE-ECS------SCCEEEEEETTTTEEE
T ss_pred --CEEEEEECCCC-eEEEEEec-----CCCccceEECCCCCEEEEEe-cCc------CCCcEEEEECCCCeEE
Confidence 23555554433 22211111 1112223333 34 455543 211 1355999999988643
No 72
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=94.66 E-value=1.8 Score=51.69 Aligned_cols=114 Identities=8% Similarity=0.033 Sum_probs=62.9
Q ss_pred CcEEEEEC-CCC--cEEEecCCCCC--CCCc---cceEEEE--eCCE----EEEEeccCCCCCccccEEEEEcCCCCCcE
Q 002047 150 ADVHCYDV-LTN--KWSRITPFGEP--PTPR---AAHVATA--VGTM----VVIQGGIGPAGLSAEDLHVLDLTQQRPRW 215 (975)
Q Consensus 150 ~dv~~yD~-~t~--~W~~l~~~g~~--P~pR---~~hsa~~--~~~~----iyv~GG~~~~~~~~~dv~~yD~~t~~~~W 215 (975)
+.+++||. .+. .|+.-...... +..+ ...+.++ .+++ ||+... ...++.+|..+....|
T Consensus 73 ~~v~AlD~~~tG~~lW~~~~~~~~~~~~~~~~~~~~~g~av~p~~g~~~~rV~v~t~-------dg~l~AlDa~TG~~~W 145 (599)
T 1w6s_A 73 NNTFALGLDDPGTILWQDKPKQNPAARAVACCDLVNRGLAYWPGDGKTPALILKTQL-------DGNVAALNAETGETVW 145 (599)
T ss_dssp TCEEEEETTCTTSEEEEECCCCCGGGGGGCSSCSCCCCCEEECCCSSSCCEEEEECT-------TSEEEEEETTTCCEEE
T ss_pred CEEEEEeCCCCCcEEEEECCCCCccccccccccccccceEEEecCCcceeEEEEEcC-------CCEEEEEECCCCCEEE
Confidence 36889999 766 48875432100 0011 1223444 5666 777532 2479999998887679
Q ss_pred EEEEecCCCCCCCcccEEEEeCCcEEEEEcCCCCCCCCCcEEEEECCCCCcEEEEcc
Q 002047 216 HRVVVQGPGPGPRYGHVMALVGQRYLMAIGGNDGKRPLADVWALDTAAKPYEWRKLE 272 (975)
Q Consensus 216 ~~v~~~g~~P~~R~~h~~~~~~~~~lyV~GG~~g~~~~ndv~~yDl~s~~~~W~~v~ 272 (975)
+.-... .........+-++.++ .||+..+......-..++.||..+....|+.-.
T Consensus 146 ~~~~~~-~~~~~~~~ssP~v~~g-~V~vg~~g~e~g~~g~v~A~D~~TG~~~W~~~~ 200 (599)
T 1w6s_A 146 KVENSD-IKVGSTLTIAPYVVKD-KVIIGSSGAELGVRGYLTAYDVKTGEQVWRAYA 200 (599)
T ss_dssp EEECCC-GGGTCBCCSCCEEETT-EEEECCBCGGGTCCCEEEEEETTTCCEEEEEES
T ss_pred eecCCC-CCccceeecCCEEECC-EEEEEecccccCCCCeEEEEECCCCcEEEEEcC
Confidence 864311 0000011222344565 677643321112345799999999887887653
No 73
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=94.63 E-value=4.7 Score=48.80 Aligned_cols=114 Identities=12% Similarity=0.049 Sum_probs=65.2
Q ss_pred CcEEEEECCCCc--EEEecCCCCCC--C---CccceEEEEeCCEEEEEeccCCCCCccccEEEEEcCCCCCcEEEEEecC
Q 002047 150 ADVHCYDVLTNK--WSRITPFGEPP--T---PRAAHVATAVGTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQG 222 (975)
Q Consensus 150 ~dv~~yD~~t~~--W~~l~~~g~~P--~---pR~~hsa~~~~~~iyv~GG~~~~~~~~~dv~~yD~~t~~~~W~~v~~~g 222 (975)
+.++.+|..+++ |+.-....... . .....+.++.+++||+... ...++.+|..+....|+.-....
T Consensus 80 ~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~g~v~v~~~-------dg~l~AlDa~TG~~~W~~~~~~~ 152 (689)
T 1yiq_A 80 SVVYALDARDGRLIWKYDPQSDRHRAGEACCDAVNRGVAVWKGKVYVGVL-------DGRLEAIDAKTGQRAWSVDTRAD 152 (689)
T ss_dssp GCEEEEETTTCCEEEEECCCCCGGGGGGCTTCSCCCCCEEETTEEEEECT-------TSEEEEEETTTCCEEEEEECCSC
T ss_pred CeEEEEECCCCceeEEEcCCCCccccccccccCCCCccEEECCEEEEEcc-------CCEEEEEECCCCCEeeeecCcCC
Confidence 368999998764 88643321000 0 0112234566788887642 35799999998876798754201
Q ss_pred CCCCCCcccEEEEeCCcEEEEEcCCCCCCCCCcEEEEECCCCCcEEEEc
Q 002047 223 PGPGPRYGHVMALVGQRYLMAIGGNDGKRPLADVWALDTAAKPYEWRKL 271 (975)
Q Consensus 223 ~~P~~R~~h~~~~~~~~~lyV~GG~~g~~~~ndv~~yDl~s~~~~W~~v 271 (975)
.........+-++.++ .+|+..+......-..++.||..+....|+.-
T Consensus 153 ~~~~~~~~~sP~v~~g-~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~~ 200 (689)
T 1yiq_A 153 HKRSYTITGAPRVVNG-KVVIGNGGAEFGVRGYVTAYDAETGKEAWRFY 200 (689)
T ss_dssp TTSCCBCCSCCEEETT-EEEECCBCTTTCCBCEEEEEETTTCCEEEEEE
T ss_pred CCCCccccCCcEEECC-EEEEEeCCCccCCCCEEEEEECCCCcEEEEec
Confidence 1111112223345565 67764332111234579999999988789864
No 74
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=94.58 E-value=5.2 Score=42.29 Aligned_cols=182 Identities=10% Similarity=0.108 Sum_probs=95.1
Q ss_pred CcEEEEECCCCc--EEEecCCCCCCCCccceEEEEe-CCEEEEEeccCCCCCccccEEEEEcCCCCCcEEEEEecCCCCC
Q 002047 150 ADVHCYDVLTNK--WSRITPFGEPPTPRAAHVATAV-GTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPG 226 (975)
Q Consensus 150 ~dv~~yD~~t~~--W~~l~~~g~~P~pR~~hsa~~~-~~~iyv~GG~~~~~~~~~dv~~yD~~t~~~~W~~v~~~g~~P~ 226 (975)
+.++.+|..+++ |+.-... ....|.+.+. ++.+|+.+ .+.++.||+ +....|+.-. +.
T Consensus 15 ~~v~~~d~~tG~~~w~~~~~~-----~~~~~~~~~~pdG~ilvs~--------~~~V~~~d~-~G~~~W~~~~-----~~ 75 (276)
T 3no2_A 15 NKIAIINKDTKEIVWEYPLEK-----GWECNSVAATKAGEILFSY--------SKGAKMITR-DGRELWNIAA-----PA 75 (276)
T ss_dssp SEEEEEETTTTEEEEEEECCT-----TCCCCEEEECTTSCEEEEC--------BSEEEEECT-TSCEEEEEEC-----CT
T ss_pred CEEEEEECCCCeEEEEeCCCc-----cCCCcCeEECCCCCEEEeC--------CCCEEEECC-CCCEEEEEcC-----CC
Confidence 478899987765 7654321 1123444444 55777732 246999999 4444676543 21
Q ss_pred CCcccEEEEeCCcEEEEEcCCCCCCCCCcEEEEECCCCCcEEEEccCCCC-CCCCcceeEEEEEeCCeEEEecCCCCCCC
Q 002047 227 PRYGHVMALVGQRYLMAIGGNDGKRPLADVWALDTAAKPYEWRKLEPEGE-GPPPCMYATASARSDGLLLLCGGRDASSV 305 (975)
Q Consensus 227 ~R~~h~~~~~~~~~lyV~GG~~g~~~~ndv~~yDl~s~~~~W~~v~~~~~-~P~~r~~~~a~~~~~g~lyvfGG~~~~~~ 305 (975)
...-+++....++.+++....+ ...++.+|+. ....|+.-..... .+. ...+.+....++.+++....
T Consensus 76 ~~~~~~~~~~~dG~~lv~~~~~----~~~v~~vd~~-Gk~l~~~~~~~~~~~~~-~~~~~v~~~~~G~~lv~~~~----- 144 (276)
T 3no2_A 76 GCEMQTARILPDGNALVAWCGH----PSTILEVNMK-GEVLSKTEFETGIERPH-AQFRQINKNKKGNYLVPLFA----- 144 (276)
T ss_dssp TCEEEEEEECTTSCEEEEEEST----TEEEEEECTT-SCEEEEEEECCSCSSGG-GSCSCCEECTTSCEEEEETT-----
T ss_pred CccccccEECCCCCEEEEecCC----CCEEEEEeCC-CCEEEEEeccCCCCccc-ccccCceECCCCCEEEEecC-----
Confidence 2233455555555566654321 2368888874 4345654322111 110 11122234456666665432
Q ss_pred CccceEEeecCCCCeEEEEECCCCCCCCcceeeEEEe-CCEEEEEcCcCCCCCccccCCcEEEEECCCC--eEEEc
Q 002047 306 PLASAYGLAKHRDGRWEWAIAPGVSPSPRYQHAAVFV-NARLHVSGGALGGGRMVEDSSSVAVLDTAAG--VWCDT 378 (975)
Q Consensus 306 ~l~d~~~~~~~~~~~W~w~~~~g~~P~~R~~hs~v~~-~~~L~V~GG~~~~~~~~~~~~dv~~yD~~t~--~W~~v 378 (975)
-..+..|+.. ++..|....+..| +++... ++.++|.+.. ...|..||++++ .|+.-
T Consensus 145 -~~~v~~~d~~--G~~~w~~~~~~~~-----~~~~~~~~g~~~v~~~~---------~~~v~~~d~~tG~~~w~~~ 203 (276)
T 3no2_A 145 -TSEVREIAPN--GQLLNSVKLSGTP-----FSSAFLDNGDCLVACGD---------AHCFVQLNLESNRIVRRVN 203 (276)
T ss_dssp -TTEEEEECTT--SCEEEEEECSSCC-----CEEEECTTSCEEEECBT---------TSEEEEECTTTCCEEEEEE
T ss_pred -CCEEEEECCC--CCEEEEEECCCCc-----cceeEcCCCCEEEEeCC---------CCeEEEEeCcCCcEEEEec
Confidence 2346777665 4445554432212 234444 6788887653 234899999966 46543
No 75
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=94.47 E-value=4.8 Score=42.68 Aligned_cols=186 Identities=10% Similarity=0.060 Sum_probs=90.7
Q ss_pred cCcEEEEECCCCcEEEecCCCCCCCCccceEEEEe-C-CEEEEEeccCCCCCccccEEEEEcCCCCCcEEEEEecCCCCC
Q 002047 149 TADVHCYDVLTNKWSRITPFGEPPTPRAAHVATAV-G-TMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPG 226 (975)
Q Consensus 149 ~~dv~~yD~~t~~W~~l~~~g~~P~pR~~hsa~~~-~-~~iyv~GG~~~~~~~~~dv~~yD~~t~~~~W~~v~~~g~~P~ 226 (975)
.+.+..||+.+++.......+ .....++.. + +.+|+.+.. .+.+++||+.+....-..+. .+..
T Consensus 19 ~~~v~~~d~~~~~~~~~~~~~-----~~~~~~~~s~dg~~l~~~~~~------~~~i~~~d~~~~~~~~~~~~-~~~~-- 84 (331)
T 3u4y_A 19 LRRISFFSTDTLEILNQITLG-----YDFVDTAITSDCSNVVVTSDF------CQTLVQIETQLEPPKVVAIQ-EGQS-- 84 (331)
T ss_dssp GTEEEEEETTTCCEEEEEECC-----CCEEEEEECSSSCEEEEEEST------TCEEEEEECSSSSCEEEEEE-ECSS--
T ss_pred CCeEEEEeCcccceeeeEEcc-----CCcceEEEcCCCCEEEEEeCC------CCeEEEEECCCCceeEEecc-cCCC--
Confidence 458899999999887665432 111133332 3 357776652 24899999988642122222 2221
Q ss_pred CCcccEEEEe-CCcEEEEEcCCCCCCCCCcEEEEECCCCCcEEEEccCCCCCCCCcceeEEEEEeCC-eEEEecCCCCCC
Q 002047 227 PRYGHVMALV-GQRYLMAIGGNDGKRPLADVWALDTAAKPYEWRKLEPEGEGPPPCMYATASARSDG-LLLLCGGRDASS 304 (975)
Q Consensus 227 ~R~~h~~~~~-~~~~lyV~GG~~g~~~~ndv~~yDl~s~~~~W~~v~~~~~~P~~r~~~~a~~~~~g-~lyvfGG~~~~~ 304 (975)
+ .++++.. ++++|| .+...+ ....+++||+.+. +....-..+. ..+..+...++ .+|+.+..+..
T Consensus 85 ~--~~~~~~s~dg~~l~-~~~~~~--~~~~i~v~d~~~~--~~~~~~~~~~-----~~~~~~~spdg~~l~~~~~~~~~- 151 (331)
T 3u4y_A 85 S--MADVDITPDDQFAV-TVTGLN--HPFNMQSYSFLKN--KFISTIPIPY-----DAVGIAISPNGNGLILIDRSSAN- 151 (331)
T ss_dssp C--CCCEEECTTSSEEE-ECCCSS--SSCEEEEEETTTT--EEEEEEECCT-----TEEEEEECTTSSCEEEEEETTTT-
T ss_pred C--ccceEECCCCCEEE-EecCCC--CcccEEEEECCCC--CeEEEEECCC-----CccceEECCCCCEEEEEecCCCc-
Confidence 1 2313333 344566 332221 1237999999888 5544433322 22334444455 47776543221
Q ss_pred CCccceEEeecCCCCeEEEEECCCCCCCCcceeeEEEe-CC-EEEEEcCcCCCCCccccCCcEEEEECCCCeE
Q 002047 305 VPLASAYGLAKHRDGRWEWAIAPGVSPSPRYQHAAVFV-NA-RLHVSGGALGGGRMVEDSSSVAVLDTAAGVW 375 (975)
Q Consensus 305 ~~l~d~~~~~~~~~~~W~w~~~~g~~P~~R~~hs~v~~-~~-~L~V~GG~~~~~~~~~~~~dv~~yD~~t~~W 375 (975)
.++.|+...++...... ....+....-..+++. ++ .+|+.+.. .+.+.+||+++.+.
T Consensus 152 ----~i~~~~~~~~g~~~~~~-~~~~~~~~~~~~~~~spdg~~l~v~~~~---------~~~v~v~d~~~~~~ 210 (331)
T 3u4y_A 152 ----TVRRFKIDADGVLFDTG-QEFISGGTRPFNITFTPDGNFAFVANLI---------GNSIGILETQNPEN 210 (331)
T ss_dssp ----EEEEEEECTTCCEEEEE-EEEECSSSSEEEEEECTTSSEEEEEETT---------TTEEEEEECSSTTS
T ss_pred ----eEEEEEECCCCcEeecC-CccccCCCCccceEECCCCCEEEEEeCC---------CCeEEEEECCCCcc
Confidence 03333332333221111 0000111122334443 34 57776532 34589999988764
No 76
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=94.47 E-value=2.9 Score=44.11 Aligned_cols=180 Identities=13% Similarity=0.083 Sum_probs=87.8
Q ss_pred CcEEEEECCCCcEEEecCCCCCCCCccceEEEEe-CCEEEEEeccCCCCCccccEEEEEcCCCCCcEEEEEecCCCCCCC
Q 002047 150 ADVHCYDVLTNKWSRITPFGEPPTPRAAHVATAV-GTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGPR 228 (975)
Q Consensus 150 ~dv~~yD~~t~~W~~l~~~g~~P~pR~~hsa~~~-~~~iyv~GG~~~~~~~~~dv~~yD~~t~~~~W~~v~~~g~~P~~R 228 (975)
..+..||+.+.++....... .....-.+++.. ++..++.|+. ...+.+||+.+.. ..... .. ...
T Consensus 119 ~~i~~~d~~~~~~~~~~~~~--~~~~~i~~~~~~~~~~~l~~~~~------dg~v~~~d~~~~~--~~~~~---~~-~~~ 184 (337)
T 1gxr_A 119 STLSIWDLAAPTPRIKAELT--SSAPACYALAISPDSKVCFSCCS------DGNIAVWDLHNQT--LVRQF---QG-HTD 184 (337)
T ss_dssp SEEEEEECCCC--EEEEEEE--CSSSCEEEEEECTTSSEEEEEET------TSCEEEEETTTTE--EEEEE---CC-CSS
T ss_pred CcEEEEECCCCCcceeeecc--cCCCceEEEEECCCCCEEEEEeC------CCcEEEEeCCCCc--eeeee---ec-ccC
Confidence 47888999887754433221 011111222222 3456666664 2468999998753 22211 11 111
Q ss_pred cccEEEEeCCcEEEEEcCCCCCCCCCcEEEEECCCCCcEEEEccCCCCCCCCcceeEEEEEeCCeEEEecCCCCCCCCcc
Q 002047 229 YGHVMALVGQRYLMAIGGNDGKRPLADVWALDTAAKPYEWRKLEPEGEGPPPCMYATASARSDGLLLLCGGRDASSVPLA 308 (975)
Q Consensus 229 ~~h~~~~~~~~~lyV~GG~~g~~~~ndv~~yDl~s~~~~W~~v~~~~~~P~~r~~~~a~~~~~g~lyvfGG~~~~~~~l~ 308 (975)
.-.+++...++..++.|+.++ .+..||+.+. +-........ .........++.++++|+.++
T Consensus 185 ~i~~~~~~~~~~~l~~~~~dg-----~i~~~d~~~~--~~~~~~~~~~-----~v~~~~~s~~~~~l~~~~~~~------ 246 (337)
T 1gxr_A 185 GASCIDISNDGTKLWTGGLDN-----TVRSWDLREG--RQLQQHDFTS-----QIFSLGYCPTGEWLAVGMESS------ 246 (337)
T ss_dssp CEEEEEECTTSSEEEEEETTS-----EEEEEETTTT--EEEEEEECSS-----CEEEEEECTTSSEEEEEETTS------
T ss_pred ceEEEEECCCCCEEEEEecCC-----cEEEEECCCC--ceEeeecCCC-----ceEEEEECCCCCEEEEEcCCC------
Confidence 122333333445666776553 6899999887 3322221111 222333345677777776543
Q ss_pred ceEEeecCCCCeEEEEECCCCCCCCcceeeEEEe-CCEEEEEcCcCCCCCccccCCcEEEEECCCCeEE
Q 002047 309 SAYGLAKHRDGRWEWAIAPGVSPSPRYQHAAVFV-NARLHVSGGALGGGRMVEDSSSVAVLDTAAGVWC 376 (975)
Q Consensus 309 d~~~~~~~~~~~W~w~~~~g~~P~~R~~hs~v~~-~~~L~V~GG~~~~~~~~~~~~dv~~yD~~t~~W~ 376 (975)
.+..++........ ... ....-.++++. ++.+++.|+.+ ..+.+||+.+.+-.
T Consensus 247 ~i~~~~~~~~~~~~---~~~---~~~~v~~~~~~~~~~~l~~~~~d---------g~i~~~~~~~~~~~ 300 (337)
T 1gxr_A 247 NVEVLHVNKPDKYQ---LHL---HESCVLSLKFAYCGKWFVSTGKD---------NLLNAWRTPYGASI 300 (337)
T ss_dssp CEEEEETTSSCEEE---ECC---CSSCEEEEEECTTSSEEEEEETT---------SEEEEEETTTCCEE
T ss_pred cEEEEECCCCCeEE---EcC---CccceeEEEECCCCCEEEEecCC---------CcEEEEECCCCeEE
Confidence 24444444332221 111 11112233333 46677777643 34889999887654
No 77
>1ute_A Protein (II purple acid phosphatase); tartrate resistant acid phosphatase metalloenzyme, uteroferrin, hydrolase; HET: NAG; 1.55A {Sus scrofa} SCOP: d.159.1.1 PDB: 1war_A* 2bq8_X 1qfc_A* 1qhw_A*
Probab=94.43 E-value=0.018 Score=62.27 Aligned_cols=22 Identities=5% Similarity=0.221 Sum_probs=18.6
Q ss_pred HHHHHHHHHcCCeEEEEecccc
Q 002047 885 DRVMEFCNNNDLQLIVRAHECV 906 (975)
Q Consensus 885 ~~~~~fl~~~~l~~iiR~H~~~ 906 (975)
+.+.+.++++++++++-||.-.
T Consensus 203 ~~l~~~l~~~~v~~~l~GH~H~ 224 (313)
T 1ute_A 203 KQLLPLLTTHKVTAYLCGHDHN 224 (313)
T ss_dssp HHTHHHHHHTTCSEEEECSSSS
T ss_pred HHHHHHHHHcCCcEEEECChhh
Confidence 5677788899999999999864
No 78
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=94.41 E-value=5.7 Score=47.86 Aligned_cols=114 Identities=16% Similarity=0.148 Sum_probs=65.6
Q ss_pred CcEEEEECCCCc--EEEecCCCCCC-----CCccceEEEEeCCEEEEEeccCCCCCccccEEEEEcCCCCCcEEEEEecC
Q 002047 150 ADVHCYDVLTNK--WSRITPFGEPP-----TPRAAHVATAVGTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQG 222 (975)
Q Consensus 150 ~dv~~yD~~t~~--W~~l~~~g~~P-----~pR~~hsa~~~~~~iyv~GG~~~~~~~~~dv~~yD~~t~~~~W~~v~~~g 222 (975)
+.++.+|..+++ |+.-....... ......+.++.+++||+... ...++.+|..+....|+.-...
T Consensus 76 ~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~-------dg~l~alD~~tG~~~W~~~~~~- 147 (668)
T 1kv9_A 76 SRVIAVDAASGKELWRYDPEVAKVKARTSCCDAVNRGVALWGDKVYVGTL-------DGRLIALDAKTGKAIWSQQTTD- 147 (668)
T ss_dssp GEEEEEETTTCCEEEEECCCCCGGGGGGCTTCSCCCCCEEEBTEEEEECT-------TSEEEEEETTTCCEEEEEECSC-
T ss_pred CeEEEEECCCChhceEECCCCCccccccccccCCccceEEECCEEEEEcC-------CCEEEEEECCCCCEeeeeccCC-
Confidence 368899988764 88743321000 00112334556788887642 2579999999887779875311
Q ss_pred CCCCCCcccEEEEeCCcEEEEEcCCCCCCCCCcEEEEECCCCCcEEEEcc
Q 002047 223 PGPGPRYGHVMALVGQRYLMAIGGNDGKRPLADVWALDTAAKPYEWRKLE 272 (975)
Q Consensus 223 ~~P~~R~~h~~~~~~~~~lyV~GG~~g~~~~ndv~~yDl~s~~~~W~~v~ 272 (975)
.........+.++.++ .+|+..+......-..++.||+.+....|+.-.
T Consensus 148 ~~~~~~~~~~P~v~~~-~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~~~ 196 (668)
T 1kv9_A 148 PAKPYSITGAPRVVKG-KVIIGNGGAEYGVRGFVSAYDADTGKLAWRFYT 196 (668)
T ss_dssp TTSSCBCCSCCEEETT-EEEECCBCTTTCCBCEEEEEETTTCCEEEEEES
T ss_pred CCCcceecCCCEEECC-EEEEeCCCCCcCCCCEEEEEECCCCcEEEEecc
Confidence 1111122223345565 677643322122345799999999888898753
No 79
>2qfp_A Purple acid phosphatase; binuclear, Fe-Zn, hydrolase; HET: NAG NDG; 2.20A {Phaseolus vulgaris} SCOP: b.1.12.1 d.159.1.1 PDB: 2qfr_A* 1kbp_A* 3kbp_A* 4kbp_A*
Probab=94.21 E-value=0.053 Score=62.01 Aligned_cols=72 Identities=19% Similarity=0.164 Sum_probs=42.7
Q ss_pred CCEEEEecCCCCHHHHHHHHHHhCCCCCCCCccceeEEEeccccCCCCC------h-HHHHHHHHHhhhcCCCCEEEEec
Q 002047 698 APIKIFGDLHGQFGDLMRLFDEYGSPSTAGDIAYIDYLFLGDYVDRGQH------S-LETITLLLALKVEYPNNVHLIRG 770 (975)
Q Consensus 698 ~~i~vvGDiHG~~~~L~~ll~~~g~~~~~~~~~~~~~vfLGDyVDRG~~------s-~evl~ll~~lk~~~P~~v~llrG 770 (975)
.++.++||+|.....+. +++.+.....+-+ -+|++||+++.+.. . -+...++..+.... -++.+.|
T Consensus 120 ~~f~~igD~~~~~~~~~-~l~~~~~~~~~~D----~vl~~GDl~y~~~~~~~~~~~~~~~~~~l~~~~~~~--P~~~v~G 192 (424)
T 2qfp_A 120 YTFGLIGDLGQSFDSNT-TLSHYELSPKKGQ----TVLFVGDLSYADRYPNHDNVRWDTWGRFTERSVAYQ--PWIWTAG 192 (424)
T ss_dssp EEEEEECSCTTBHHHHH-HHHHHHTCSSCCC----EEEECSCCSCGGGSGGGCTHHHHHHHHHHHHHHTTS--CEEECCC
T ss_pred eEEEEEEeCCCCCChHH-HHHHHHhCCCCCC----EEEEcCccccccccccccchHHHHHHHHHHHHHhcC--CeEeecC
Confidence 36899999998875442 3443322110111 58889999986421 1 12233444443333 4999999
Q ss_pred cccccc
Q 002047 771 NHEAAD 776 (975)
Q Consensus 771 NHE~~~ 776 (975)
|||...
T Consensus 193 NHD~~~ 198 (424)
T 2qfp_A 193 NHEIEF 198 (424)
T ss_dssp HHHHCC
T ss_pred Cccccc
Confidence 999863
No 80
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=93.92 E-value=7.8 Score=41.22 Aligned_cols=188 Identities=15% Similarity=0.100 Sum_probs=91.6
Q ss_pred CcEEEEECCCCcEEEecCCCCCCC-----CccceEEEEe--CCEEEEEeccCCCCCccccEEEEEcCCCCCcEEEEEecC
Q 002047 150 ADVHCYDVLTNKWSRITPFGEPPT-----PRAAHVATAV--GTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQG 222 (975)
Q Consensus 150 ~dv~~yD~~t~~W~~l~~~g~~P~-----pR~~hsa~~~--~~~iyv~GG~~~~~~~~~dv~~yD~~t~~~~W~~v~~~g 222 (975)
+.++.||+.+.+-......+.... +..-+.++.. ++.+|+.+... ...+++||+.+... -..++..
T Consensus 111 ~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~-----~~~i~~~d~~~~~~-~~~~~~~- 183 (353)
T 3vgz_A 111 SAVTAIDAKTGEVKGRLVLDDRKRTEEVRPLQPRELVADDATNTVYISGIGK-----ESVIWVVDGGNIKL-KTAIQNT- 183 (353)
T ss_dssp TEEEEEETTTCCEEEEEESCCCCCCSSCCCCEEEEEEEETTTTEEEEEEESS-----SCEEEEEETTTTEE-EEEECCC-
T ss_pred CEEEEEeCCCCeeEEEEecCCCccccccCCCCCceEEECCCCCEEEEEecCC-----CceEEEEcCCCCce-EEEecCC-
Confidence 478999998876433322211111 1112334443 34777776321 34699999987531 1122111
Q ss_pred CCCCCCcccEEEEe-CCcEEEEEcCCCCCCCCCcEEEEECCCCCcEEEEccCCCCCCCCcceeEEEEEe-CCeEEEecCC
Q 002047 223 PGPGPRYGHVMALV-GQRYLMAIGGNDGKRPLADVWALDTAAKPYEWRKLEPEGEGPPPCMYATASARS-DGLLLLCGGR 300 (975)
Q Consensus 223 ~~P~~R~~h~~~~~-~~~~lyV~GG~~g~~~~ndv~~yDl~s~~~~W~~v~~~~~~P~~r~~~~a~~~~-~g~lyvfGG~ 300 (975)
...-+.++.. +++.+|+... -+.+++||+.+....|..... ...+. ......+... ++.+|+....
T Consensus 184 ----~~~~~~~~~s~dg~~l~~~~~------~~~i~~~d~~~~~~~~~~~~~-~~~~~-~~~~~~~~s~dg~~l~~~~~~ 251 (353)
T 3vgz_A 184 ----GKMSTGLALDSEGKRLYTTNA------DGELITIDTADNKILSRKKLL-DDGKE-HFFINISLDTARQRAFITDSK 251 (353)
T ss_dssp ----CTTCCCCEEETTTTEEEEECT------TSEEEEEETTTTEEEEEEECC-CSSSC-CCEEEEEEETTTTEEEEEESS
T ss_pred ----CCccceEEECCCCCEEEEEcC------CCeEEEEECCCCeEEEEEEcC-CCCCC-cccceEEECCCCCEEEEEeCC
Confidence 1112233333 4446777643 247899999888433332221 11111 1112223333 4457665432
Q ss_pred CCCCCCccceEEeecCCCCeEEEEECCCCCCCCcceeeEEEe--CCEEEEEcCcCCCCCccccCCcEEEEECCCCeEEEc
Q 002047 301 DASSVPLASAYGLAKHRDGRWEWAIAPGVSPSPRYQHAAVFV--NARLHVSGGALGGGRMVEDSSSVAVLDTAAGVWCDT 378 (975)
Q Consensus 301 ~~~~~~l~d~~~~~~~~~~~W~w~~~~g~~P~~R~~hs~v~~--~~~L~V~GG~~~~~~~~~~~~dv~~yD~~t~~W~~v 378 (975)
.+.++.++..+. +..+....+ .+ ..+++. ++.+|+.+.. .+.|.+||+.+.+....
T Consensus 252 ------~~~v~~~d~~~~-~~~~~~~~~---~~---~~~~~s~dg~~l~v~~~~---------~~~v~~~d~~~~~~~~~ 309 (353)
T 3vgz_A 252 ------AAEVLVVDTRNG-NILAKVAAP---ES---LAVLFNPARNEAYVTHRQ---------AGKVSVIDAKSYKVVKT 309 (353)
T ss_dssp ------SSEEEEEETTTC-CEEEEEECS---SC---CCEEEETTTTEEEEEETT---------TTEEEEEETTTTEEEEE
T ss_pred ------CCEEEEEECCCC-cEEEEEEcC---CC---ceEEECCCCCEEEEEECC---------CCeEEEEECCCCeEEEE
Confidence 245666765443 322222221 11 223333 3468876542 24599999999876544
No 81
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=93.79 E-value=1.9 Score=44.41 Aligned_cols=189 Identities=12% Similarity=0.064 Sum_probs=92.3
Q ss_pred ccCcEEEEECCCCcEEEecCCCCCCCCccceEEEEe-CCEEEEEeccCCCCCccccEEEEEcCC-CCCcEEEEEecCCCC
Q 002047 148 ATADVHCYDVLTNKWSRITPFGEPPTPRAAHVATAV-GTMVVIQGGIGPAGLSAEDLHVLDLTQ-QRPRWHRVVVQGPGP 225 (975)
Q Consensus 148 ~~~dv~~yD~~t~~W~~l~~~g~~P~pR~~hsa~~~-~~~iyv~GG~~~~~~~~~dv~~yD~~t-~~~~W~~v~~~g~~P 225 (975)
....++.+|+.+.....+... ...-.+++.. +++.+++++. ..++++|+.+ .. ...+. ...
T Consensus 20 ~~~~i~~~d~~~~~~~~~~~~-----~~~v~~~~~spdg~~l~~~~~-------~~i~~~d~~~~~~--~~~~~---~~~ 82 (297)
T 2ojh_A 20 MRSSIEIFNIRTRKMRVVWQT-----PELFEAPNWSPDGKYLLLNSE-------GLLYRLSLAGDPS--PEKVD---TGF 82 (297)
T ss_dssp CCEEEEEEETTTTEEEEEEEE-----SSCCEEEEECTTSSEEEEEET-------TEEEEEESSSCCS--CEECC---CTT
T ss_pred cceeEEEEeCCCCceeeeccC-----CcceEeeEECCCCCEEEEEcC-------CeEEEEeCCCCCC--ceEec---ccc
Confidence 456899999999887766432 1112222222 3455555542 4799999988 53 44332 112
Q ss_pred CCCcccEEEEeCCcEEEEEcCCCCCCCCCcEEEEECCCCCcEEEEccCCCCCCCCcceeEEEEEeCCe-EEEecCCCCCC
Q 002047 226 GPRYGHVMALVGQRYLMAIGGNDGKRPLADVWALDTAAKPYEWRKLEPEGEGPPPCMYATASARSDGL-LLLCGGRDASS 304 (975)
Q Consensus 226 ~~R~~h~~~~~~~~~lyV~GG~~g~~~~ndv~~yDl~s~~~~W~~v~~~~~~P~~r~~~~a~~~~~g~-lyvfGG~~~~~ 304 (975)
....-..++...++..+++++.+.. ....+|.+|+.+. ....+.... .........+++ |++.++.++
T Consensus 83 ~~~~~~~~~~spdg~~l~~~~~~~~-~~~~l~~~~~~~~--~~~~~~~~~------~~~~~~~spdg~~l~~~~~~~~-- 151 (297)
T 2ojh_A 83 ATICNNDHGISPDGALYAISDKVEF-GKSAIYLLPSTGG--TPRLMTKNL------PSYWHGWSPDGKSFTYCGIRDQ-- 151 (297)
T ss_dssp CCCBCSCCEECTTSSEEEEEECTTT-SSCEEEEEETTCC--CCEECCSSS------SEEEEEECTTSSEEEEEEEETT--
T ss_pred ccccccceEECCCCCEEEEEEeCCC-CcceEEEEECCCC--ceEEeecCC------CccceEECCCCCEEEEEECCCC--
Confidence 1122222333333345555543221 3468999998877 444443321 122222333454 444444332
Q ss_pred CCccceEEeecCCCCeEEEEECCCCCCCCcceeeEEEe-CCE-EEEEcCcCCCCCccccCCcEEEEECCCCeEEEcc
Q 002047 305 VPLASAYGLAKHRDGRWEWAIAPGVSPSPRYQHAAVFV-NAR-LHVSGGALGGGRMVEDSSSVAVLDTAAGVWCDTK 379 (975)
Q Consensus 305 ~~l~d~~~~~~~~~~~W~w~~~~g~~P~~R~~hs~v~~-~~~-L~V~GG~~~~~~~~~~~~dv~~yD~~t~~W~~v~ 379 (975)
...+|.++.... . ....... ...-..+++. ++. |++.+..++ ...+|.+++.+.....+.
T Consensus 152 --~~~l~~~~~~~~-~--~~~~~~~---~~~~~~~~~s~dg~~l~~~~~~~~-------~~~i~~~~~~~~~~~~~~ 213 (297)
T 2ojh_A 152 --VFDIYSMDIDSG-V--ETRLTHG---EGRNDGPDYSPDGRWIYFNSSRTG-------QMQIWRVRVDGSSVERIT 213 (297)
T ss_dssp --EEEEEEEETTTC-C--EEECCCS---SSCEEEEEECTTSSEEEEEECTTS-------SCEEEEEETTSSCEEECC
T ss_pred --ceEEEEEECCCC-c--ceEcccC---CCccccceECCCCCEEEEEecCCC-------CccEEEECCCCCCcEEEe
Confidence 235666654433 2 2222211 1111223332 444 444443322 345899998877766554
No 82
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=93.70 E-value=8 Score=40.66 Aligned_cols=180 Identities=12% Similarity=0.121 Sum_probs=85.5
Q ss_pred cEEEEECCCCcEEEecCCCCCCCCccceEEEEe-CCEEEEEeccCCCCCccccEEEEEcCCCCCcEEEEEecCCCCCCCc
Q 002047 151 DVHCYDVLTNKWSRITPFGEPPTPRAAHVATAV-GTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGPRY 229 (975)
Q Consensus 151 dv~~yD~~t~~W~~l~~~g~~P~pR~~hsa~~~-~~~iyv~GG~~~~~~~~~dv~~yD~~t~~~~W~~v~~~g~~P~~R~ 229 (975)
.+..||..+......-.. ....-.+++.. ++.+++.|+. ...+.+||+.+.. .-..+. + ....
T Consensus 46 ~i~iw~~~~~~~~~~~~~----h~~~v~~~~~~~~~~~l~s~~~------d~~i~vwd~~~~~-~~~~~~--~---~~~~ 109 (312)
T 4ery_A 46 LIKIWGAYDGKFEKTISG----HKLGISDVAWSSDSNLLVSASD------DKTLKIWDVSSGK-CLKTLK--G---HSNY 109 (312)
T ss_dssp CEEEEETTTCCEEEEECC----CSSCEEEEEECTTSSEEEEEET------TSEEEEEETTTCC-EEEEEE--C---CSSC
T ss_pred eEEEEeCCCcccchhhcc----CCCceEEEEEcCCCCEEEEECC------CCEEEEEECCCCc-EEEEEc--C---CCCC
Confidence 567788877766554321 11111222222 3466677764 3578999998763 111221 1 0111
Q ss_pred ccEEEEeCCcEEEEEcCCCCCCCCCcEEEEECCCCCcEEEEccCCCCCCCCcceeEEEEEeCCeEEEecCCCCCCCCccc
Q 002047 230 GHVMALVGQRYLMAIGGNDGKRPLADVWALDTAAKPYEWRKLEPEGEGPPPCMYATASARSDGLLLLCGGRDASSVPLAS 309 (975)
Q Consensus 230 ~h~~~~~~~~~lyV~GG~~g~~~~ndv~~yDl~s~~~~W~~v~~~~~~P~~r~~~~a~~~~~g~lyvfGG~~~~~~~l~d 309 (975)
-.++....++.+++.|+.++ .+..||+.+. +-...-.... ..........++.+++.|+.++.
T Consensus 110 v~~~~~~~~~~~l~s~~~d~-----~i~iwd~~~~--~~~~~~~~~~----~~v~~~~~~~~~~~l~~~~~d~~------ 172 (312)
T 4ery_A 110 VFCCNFNPQSNLIVSGSFDE-----SVRIWDVKTG--KCLKTLPAHS----DPVSAVHFNRDGSLIVSSSYDGL------ 172 (312)
T ss_dssp EEEEEECSSSSEEEEEETTS-----CEEEEETTTC--CEEEEECCCS----SCEEEEEECTTSSEEEEEETTSC------
T ss_pred EEEEEEcCCCCEEEEEeCCC-----cEEEEECCCC--EEEEEecCCC----CcEEEEEEcCCCCEEEEEeCCCc------
Confidence 12222333335777777664 5889999876 3222111111 01122223346677777776542
Q ss_pred eEEeecCCCCeEEEEECCCCCCCCcceeeEEEe-CCEEEEEcCcCCCCCccccCCcEEEEECCCCeEE
Q 002047 310 AYGLAKHRDGRWEWAIAPGVSPSPRYQHAAVFV-NARLHVSGGALGGGRMVEDSSSVAVLDTAAGVWC 376 (975)
Q Consensus 310 ~~~~~~~~~~~W~w~~~~g~~P~~R~~hs~v~~-~~~L~V~GG~~~~~~~~~~~~dv~~yD~~t~~W~ 376 (975)
+..++.... .......... .... ..+++. ++.+++.|+.+ ..|.+||+.+.+-.
T Consensus 173 i~~wd~~~~-~~~~~~~~~~--~~~~-~~~~~~~~~~~l~~~~~d---------~~i~iwd~~~~~~~ 227 (312)
T 4ery_A 173 CRIWDTASG-QCLKTLIDDD--NPPV-SFVKFSPNGKYILAATLD---------NTLKLWDYSKGKCL 227 (312)
T ss_dssp EEEEETTTC-CEEEEECCSS--CCCE-EEEEECTTSSEEEEEETT---------TEEEEEETTTTEEE
T ss_pred EEEEECCCC-ceeeEEeccC--CCce-EEEEECCCCCEEEEEcCC---------CeEEEEECCCCcEE
Confidence 333333322 2111111111 1111 112222 45666776643 34889999887643
No 83
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=93.50 E-value=6.7 Score=43.82 Aligned_cols=175 Identities=15% Similarity=0.135 Sum_probs=85.8
Q ss_pred CcEEEEECCCCcEEEecCCCCCCCCccceEEEEeCCEEEEEeccCCCCCccccEEEEEcCCCCCcEEEEEecCCCCCCCc
Q 002047 150 ADVHCYDVLTNKWSRITPFGEPPTPRAAHVATAVGTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGPRY 229 (975)
Q Consensus 150 ~dv~~yD~~t~~W~~l~~~g~~P~pR~~hsa~~~~~~iyv~GG~~~~~~~~~dv~~yD~~t~~~~W~~v~~~g~~P~~R~ 229 (975)
..+.+||..+.+-...-.. ....-.+...++.+++.|+. ...+.+||+.+.. -...- .....
T Consensus 153 g~i~iwd~~~~~~~~~~~~-----h~~~v~~l~~~~~~l~sg~~------dg~i~vwd~~~~~--~~~~~-----~~h~~ 214 (435)
T 1p22_A 153 NTIKIWDKNTLECKRILTG-----HTGSVLCLQYDERVIITGSS------DSTVRVWDVNTGE--MLNTL-----IHHCE 214 (435)
T ss_dssp SCEEEEESSSCCEEEEECC-----CSSCEEEEECCSSEEEEEET------TSCEEEEESSSCC--EEEEE-----CCCCS
T ss_pred CeEEEEeCCCCeEEEEEcC-----CCCcEEEEEECCCEEEEEcC------CCeEEEEECCCCc--EEEEE-----cCCCC
Confidence 3678899887664433221 11122333446677777775 3569999998764 22111 11222
Q ss_pred ccEEEEeCCcEEEEEcCCCCCCCCCcEEEEECCCCCcEE-EEccCCCCCCCCcceeEEEEEeCCeEEEecCCCCCCCCcc
Q 002047 230 GHVMALVGQRYLMAIGGNDGKRPLADVWALDTAAKPYEW-RKLEPEGEGPPPCMYATASARSDGLLLLCGGRDASSVPLA 308 (975)
Q Consensus 230 ~h~~~~~~~~~lyV~GG~~g~~~~ndv~~yDl~s~~~~W-~~v~~~~~~P~~r~~~~a~~~~~g~lyvfGG~~~~~~~l~ 308 (975)
.-..+.+.+ .+++.|+.++ .+..||+.+..... ..... +. ...-.++.. ++..++.|+.++.
T Consensus 215 ~v~~l~~~~-~~l~s~s~dg-----~i~vwd~~~~~~~~~~~~~~-~~----~~~v~~~~~-~~~~l~s~~~dg~----- 277 (435)
T 1p22_A 215 AVLHLRFNN-GMMVTCSKDR-----SIAVWDMASPTDITLRRVLV-GH----RAAVNVVDF-DDKYIVSASGDRT----- 277 (435)
T ss_dssp CEEEEECCT-TEEEEEETTS-----CEEEEECSSSSCCEEEEEEC-CC----SSCEEEEEE-ETTEEEEEETTSE-----
T ss_pred cEEEEEEcC-CEEEEeeCCC-----cEEEEeCCCCCCceeeeEec-CC----CCcEEEEEe-CCCEEEEEeCCCe-----
Confidence 233444555 4677777664 68888887652111 11111 11 111222333 5566666665432
Q ss_pred ceEEeecCCCCeEEEEECCCCCCCCcceeeEEEeCCEEEEEcCcCCCCCccccCCcEEEEECCCCeE
Q 002047 309 SAYGLAKHRDGRWEWAIAPGVSPSPRYQHAAVFVNARLHVSGGALGGGRMVEDSSSVAVLDTAAGVW 375 (975)
Q Consensus 309 d~~~~~~~~~~~W~w~~~~g~~P~~R~~hs~v~~~~~L~V~GG~~~~~~~~~~~~dv~~yD~~t~~W 375 (975)
+..++..+. .-..... + ... ...++..++.+++.|+.++ .|.+||+.+.+-
T Consensus 278 -i~vwd~~~~-~~~~~~~-~---~~~-~v~~~~~~~~~l~~g~~dg---------~i~iwd~~~~~~ 328 (435)
T 1p22_A 278 -IKVWNTSTC-EFVRTLN-G---HKR-GIACLQYRDRLVVSGSSDN---------TIRLWDIECGAC 328 (435)
T ss_dssp -EEEEETTTC-CEEEEEE-C---CSS-CEEEEEEETTEEEEEETTS---------CEEEEETTTCCE
T ss_pred -EEEEECCcC-cEEEEEc-C---CCC-cEEEEEeCCCEEEEEeCCC---------eEEEEECCCCCE
Confidence 333333322 1111111 1 111 1223334566777777533 488999988753
No 84
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=93.43 E-value=9.2 Score=42.14 Aligned_cols=188 Identities=15% Similarity=0.098 Sum_probs=88.1
Q ss_pred CcEEEEECCCCcEEEecCCCCCCCCccceEEEEeCCEEEEEeccCCCCCccccEEEEEcCCCCCcEEEEEecCCCCCCCc
Q 002047 150 ADVHCYDVLTNKWSRITPFGEPPTPRAAHVATAVGTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGPRY 229 (975)
Q Consensus 150 ~dv~~yD~~t~~W~~l~~~g~~P~pR~~hsa~~~~~~iyv~GG~~~~~~~~~dv~~yD~~t~~~~W~~v~~~g~~P~~R~ 229 (975)
..+..||+.+.+....-.. .. ..-.+...++.+++.|+. ...+.+||+......-..+. + ....
T Consensus 156 g~i~iwd~~~~~~~~~~~~---~~--~~v~~~~~~~~~l~~~~~------dg~i~i~d~~~~~~~~~~~~--~---~~~~ 219 (401)
T 4aez_A 156 GLVDIYDVESQTKLRTMAG---HQ--ARVGCLSWNRHVLSSGSR------SGAIHHHDVRIANHQIGTLQ--G---HSSE 219 (401)
T ss_dssp SCEEEEETTTCCEEEEECC---CS--SCEEEEEEETTEEEEEET------TSEEEEEETTSSSCEEEEEE--C---CSSC
T ss_pred CeEEEEECcCCeEEEEecC---CC--CceEEEEECCCEEEEEcC------CCCEEEEecccCcceeeEEc--C---CCCC
Confidence 4688899887764433221 11 122223335556666664 35789999985421122222 1 1111
Q ss_pred ccEEEEeCCcEEEEEcCCCCCCCCCcEEEEECCCCCcEEEEccCCCCCCCCcceeEEEEEeCCeEEEecCCCCCCCCccc
Q 002047 230 GHVMALVGQRYLMAIGGNDGKRPLADVWALDTAAKPYEWRKLEPEGEGPPPCMYATASARSDGLLLLCGGRDASSVPLAS 309 (975)
Q Consensus 230 ~h~~~~~~~~~lyV~GG~~g~~~~ndv~~yDl~s~~~~W~~v~~~~~~P~~r~~~~a~~~~~g~lyvfGG~~~~~~~l~d 309 (975)
-.++....++.+++.|+.++ .+..||+.+.......... .. .....+..-.+..+++.||...+ ..
T Consensus 220 v~~~~~~~~~~~l~s~~~d~-----~v~iwd~~~~~~~~~~~~~-~~----~v~~~~~~p~~~~ll~~~~gs~d----~~ 285 (401)
T 4aez_A 220 VCGLAWRSDGLQLASGGNDN-----VVQIWDARSSIPKFTKTNH-NA----AVKAVAWCPWQSNLLATGGGTMD----KQ 285 (401)
T ss_dssp EEEEEECTTSSEEEEEETTS-----CEEEEETTCSSEEEEECCC-SS----CCCEEEECTTSTTEEEEECCTTT----CE
T ss_pred eeEEEEcCCCCEEEEEeCCC-----eEEEccCCCCCccEEecCC-cc----eEEEEEECCCCCCEEEEecCCCC----CE
Confidence 22233333446777777664 6889999876323322211 11 11122222224567777652211 12
Q ss_pred eEEeecCCCCeEEEEECCCCCCCCcceeeEEEe-CC-EEEEEcCcCCCCCccccCCcEEEEECCCCeEEEcccC
Q 002047 310 AYGLAKHRDGRWEWAIAPGVSPSPRYQHAAVFV-NA-RLHVSGGALGGGRMVEDSSSVAVLDTAAGVWCDTKSV 381 (975)
Q Consensus 310 ~~~~~~~~~~~W~w~~~~g~~P~~R~~hs~v~~-~~-~L~V~GG~~~~~~~~~~~~dv~~yD~~t~~W~~v~~~ 381 (975)
+..++............. ..-.++++. ++ .+++.+|.. ...+.+||..+.....+..+
T Consensus 286 i~i~d~~~~~~~~~~~~~------~~v~~~~~s~~~~~l~~~~g~~--------dg~i~v~~~~~~~~~~~~~~ 345 (401)
T 4aez_A 286 IHFWNAATGARVNTVDAG------SQVTSLIWSPHSKEIMSTHGFP--------DNNLSIWSYSSSGLTKQVDI 345 (401)
T ss_dssp EEEEETTTCCEEEEEECS------SCEEEEEECSSSSEEEEEECTT--------TCEEEEEEEETTEEEEEEEE
T ss_pred EEEEECCCCCEEEEEeCC------CcEEEEEECCCCCeEEEEeecC--------CCcEEEEecCCccceeEEEe
Confidence 444444333211111111 111222332 33 455544432 23488899888877766544
No 85
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=93.41 E-value=6.8 Score=41.96 Aligned_cols=96 Identities=9% Similarity=0.122 Sum_probs=51.5
Q ss_pred cEEEEECCCCcEEEecCCCCCCCCccceEEEEe-C--CEEEEEeccCCCCCccccEEEEEcCCCCCcEEEEEecCCCCCC
Q 002047 151 DVHCYDVLTNKWSRITPFGEPPTPRAAHVATAV-G--TMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGP 227 (975)
Q Consensus 151 dv~~yD~~t~~W~~l~~~g~~P~pR~~hsa~~~-~--~~iyv~GG~~~~~~~~~dv~~yD~~t~~~~W~~v~~~g~~P~~ 227 (975)
.+.+||+....+..+.... .....-.+++.. + +.+++.|+. ...+.+||+.+. +|..+... ...
T Consensus 34 ~i~iw~~~~~~~~~~~~~~--~h~~~v~~~~~~~~~~~~~l~s~~~------dg~v~iwd~~~~--~~~~~~~~---~~~ 100 (379)
T 3jrp_A 34 TIKIFEVEGETHKLIDTLT--GHEGPVWRVDWAHPKFGTILASCSY------DGKVLIWKEENG--RWSQIAVH---AVH 100 (379)
T ss_dssp CEEEEEEETTEEEEEEEEC--CCSSCEEEEEECCGGGCSEEEEEET------TSCEEEEEEETT--EEEEEEEE---CCC
T ss_pred cEEEEecCCCcceeeeEec--CCCCcEEEEEeCCCCCCCEEEEecc------CCEEEEEEcCCC--ceeEeeee---cCC
Confidence 5777888766666654331 111111222222 2 466666664 246889999886 36665532 212
Q ss_pred CcccEEEEe-CC--cEEEEEcCCCCCCCCCcEEEEECCCC
Q 002047 228 RYGHVMALV-GQ--RYLMAIGGNDGKRPLADVWALDTAAK 264 (975)
Q Consensus 228 R~~h~~~~~-~~--~~lyV~GG~~g~~~~ndv~~yDl~s~ 264 (975)
......+.+ .+ +.+++.|+.++ .+..||+.+.
T Consensus 101 ~~~v~~~~~~~~~~~~~l~~~~~d~-----~i~v~d~~~~ 135 (379)
T 3jrp_A 101 SASVNSVQWAPHEYGPLLLVASSDG-----KVSVVEFKEN 135 (379)
T ss_dssp SSCEEEEEECCGGGCSEEEEEETTS-----EEEEEECCTT
T ss_pred CcceEEEEeCCCCCCCEEEEecCCC-----cEEEEecCCC
Confidence 222233333 22 35777776654 6788888765
No 86
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=93.40 E-value=3.2 Score=43.99 Aligned_cols=154 Identities=12% Similarity=0.114 Sum_probs=84.6
Q ss_pred CEEEEEeccCCCCCccccEEEEEcCCCCCcEEEEEecCCCCCCCcccEEEEeCCcEEEEEcCCCCCCCCCcEEEEECCCC
Q 002047 185 TMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGPRYGHVMALVGQRYLMAIGGNDGKRPLADVWALDTAAK 264 (975)
Q Consensus 185 ~~iyv~GG~~~~~~~~~dv~~yD~~t~~~~W~~v~~~g~~P~~R~~h~~~~~~~~~lyV~GG~~g~~~~ndv~~yDl~s~ 264 (975)
+++++.|.. ...++++|..+....|+.-. +.....|.+.+..++.+|+.+ -+.++.||+ +.
T Consensus 5 ~~~lv~~~~------~~~v~~~d~~tG~~~w~~~~-----~~~~~~~~~~~~pdG~ilvs~-------~~~V~~~d~-~G 65 (276)
T 3no2_A 5 QHLLVGGSG------WNKIAIINKDTKEIVWEYPL-----EKGWECNSVAATKAGEILFSY-------SKGAKMITR-DG 65 (276)
T ss_dssp CEEEEECTT------CSEEEEEETTTTEEEEEEEC-----CTTCCCCEEEECTTSCEEEEC-------BSEEEEECT-TS
T ss_pred CcEEEeeCC------CCEEEEEECCCCeEEEEeCC-----CccCCCcCeEECCCCCEEEeC-------CCCEEEECC-CC
Confidence 567777653 36799999977655677643 111223555555555788843 245999999 66
Q ss_pred CcEEEEccCCCCCCCCcceeEEEEEeCCeEEEecCCCCCCCCccceEEeecCCCCeEEEEECCCC-CCCCcceeeEEEeC
Q 002047 265 PYEWRKLEPEGEGPPPCMYATASARSDGLLLLCGGRDASSVPLASAYGLAKHRDGRWEWAIAPGV-SPSPRYQHAAVFVN 343 (975)
Q Consensus 265 ~~~W~~v~~~~~~P~~r~~~~a~~~~~g~lyvfGG~~~~~~~l~d~~~~~~~~~~~W~w~~~~g~-~P~~R~~hs~v~~~ 343 (975)
...|+.-.... ...+.+....++++++....+ ...++.++......|++...... .+...........+
T Consensus 66 ~~~W~~~~~~~-----~~~~~~~~~~dG~~lv~~~~~-----~~~v~~vd~~Gk~l~~~~~~~~~~~~~~~~~~v~~~~~ 135 (276)
T 3no2_A 66 RELWNIAAPAG-----CEMQTARILPDGNALVAWCGH-----PSTILEVNMKGEVLSKTEFETGIERPHAQFRQINKNKK 135 (276)
T ss_dssp CEEEEEECCTT-----CEEEEEEECTTSCEEEEEEST-----TEEEEEECTTSCEEEEEEECCSCSSGGGSCSCCEECTT
T ss_pred CEEEEEcCCCC-----ccccccEECCCCCEEEEecCC-----CCEEEEEeCCCCEEEEEeccCCCCcccccccCceECCC
Confidence 67887654211 133445556677777764421 23466676543334555433221 11111122233445
Q ss_pred CEEEEEcCcCCCCCccccCCcEEEEECCCC-eEE
Q 002047 344 ARLHVSGGALGGGRMVEDSSSVAVLDTAAG-VWC 376 (975)
Q Consensus 344 ~~L~V~GG~~~~~~~~~~~~dv~~yD~~t~-~W~ 376 (975)
+.+++.... ...|.+||++-. .|+
T Consensus 136 G~~lv~~~~---------~~~v~~~d~~G~~~w~ 160 (276)
T 3no2_A 136 GNYLVPLFA---------TSEVREIAPNGQLLNS 160 (276)
T ss_dssp SCEEEEETT---------TTEEEEECTTSCEEEE
T ss_pred CCEEEEecC---------CCEEEEECCCCCEEEE
Confidence 666665432 345899999833 354
No 87
>1xzw_A Purple acid phosphatase; hydrolase; HET: NAG FUC MAN; 2.50A {Ipomoea batatas} SCOP: b.1.12.1 d.159.1.1
Probab=93.38 E-value=0.079 Score=60.59 Aligned_cols=70 Identities=16% Similarity=0.128 Sum_probs=40.7
Q ss_pred CCEEEEecCCCCHHHHHHHHHHhC-CC-CCCCCccceeEEEeccccCCCCC-----h-H-HHHHHHHHhhhcCCCCEEEE
Q 002047 698 APIKIFGDLHGQFGDLMRLFDEYG-SP-STAGDIAYIDYLFLGDYVDRGQH-----S-L-ETITLLLALKVEYPNNVHLI 768 (975)
Q Consensus 698 ~~i~vvGDiHG~~~~L~~ll~~~g-~~-~~~~~~~~~~~vfLGDyVDRG~~-----s-~-evl~ll~~lk~~~P~~v~ll 768 (975)
.+++++||+|...... +.++.+. .. ..+ -+|++||+++.+.. . . +...+|-.+.... -++.+
T Consensus 127 ~~f~~~gD~~~~~~~~-~~l~~i~~~~~~~D------~vl~~GD~~y~~~~~~~~~~~~~~~~~~l~~l~~~~--P~~~v 197 (426)
T 1xzw_A 127 YVFGLIGDIGQTHDSN-TTLTHYEQNSAKGQ------AVLFMGDLSYSNRWPNHDNNRWDTWGRFSERSVAYQ--PWIWT 197 (426)
T ss_dssp EEEEEECSCTTBHHHH-HHHHHHHHCTTCCS------EEEECSCCCCGGGSGGGCTHHHHHHHHHHHHHHTTS--CEECC
T ss_pred eEEEEEEeCCCCCchH-HHHHHHHhCCCCCC------EEEeCCChhhcccCCcccchHHHHHHHHHHHHHhcC--CEEEe
Confidence 3589999999875322 2232221 11 111 58889999975321 1 1 1233444444333 48999
Q ss_pred eccccccc
Q 002047 769 RGNHEAAD 776 (975)
Q Consensus 769 rGNHE~~~ 776 (975)
.||||...
T Consensus 198 ~GNHD~~~ 205 (426)
T 1xzw_A 198 AGNHEIDY 205 (426)
T ss_dssp CCGGGCCC
T ss_pred cccccccc
Confidence 99999864
No 88
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=93.25 E-value=11 Score=42.10 Aligned_cols=178 Identities=12% Similarity=0.072 Sum_probs=85.9
Q ss_pred CcEEEEECCCCcEEEecCCCCCCCCccceEEEEeCCEEEEEeccCCCCCccccEEEEEcCCCCCcEEEEEecCCCCCCCc
Q 002047 150 ADVHCYDVLTNKWSRITPFGEPPTPRAAHVATAVGTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGPRY 229 (975)
Q Consensus 150 ~dv~~yD~~t~~W~~l~~~g~~P~pR~~hsa~~~~~~iyv~GG~~~~~~~~~dv~~yD~~t~~~~W~~v~~~g~~P~~R~ 229 (975)
..+..||+.+.+-...-.. ....-.++..++..++.|+. ...+.+||+.+.. .+.. +.....
T Consensus 219 g~i~~wd~~~~~~~~~~~~-----~~~~v~~~~~~~~~l~~~~~------dg~i~iwd~~~~~----~~~~---~~~~~~ 280 (445)
T 2ovr_B 219 ATLRVWDIETGQCLHVLMG-----HVAAVRCVQYDGRRVVSGAY------DFMVKVWDPETET----CLHT---LQGHTN 280 (445)
T ss_dssp SEEEEEESSSCCEEEEEEC-----CSSCEEEEEECSSCEEEEET------TSCEEEEEGGGTE----EEEE---ECCCSS
T ss_pred CEEEEEECCCCcEEEEEcC-----CcccEEEEEECCCEEEEEcC------CCEEEEEECCCCc----EeEE---ecCCCC
Confidence 4677778776543322111 11112233335666666664 3568899987752 2221 111122
Q ss_pred ccEEEEeCCcEEEEEcCCCCCCCCCcEEEEECCCCCcEEEEccCCCCCCCCcceeEEEEEeCCeEEEecCCCCCCCCccc
Q 002047 230 GHVMALVGQRYLMAIGGNDGKRPLADVWALDTAAKPYEWRKLEPEGEGPPPCMYATASARSDGLLLLCGGRDASSVPLAS 309 (975)
Q Consensus 230 ~h~~~~~~~~~lyV~GG~~g~~~~ndv~~yDl~s~~~~W~~v~~~~~~P~~r~~~~a~~~~~g~lyvfGG~~~~~~~l~d 309 (975)
.-.++.+++ ..++.|+.++ .+..||+.+....+..... . ....+... ++.+++.|+.++.
T Consensus 281 ~v~~~~~~~-~~l~~~~~d~-----~i~i~d~~~~~~~~~~~~~--~-----~~v~~~~~-~~~~l~~~~~dg~------ 340 (445)
T 2ovr_B 281 RVYSLQFDG-IHVVSGSLDT-----SIRVWDVETGNCIHTLTGH--Q-----SLTSGMEL-KDNILVSGNADST------ 340 (445)
T ss_dssp CEEEEEECS-SEEEEEETTS-----CEEEEETTTCCEEEEECCC--C-----SCEEEEEE-ETTEEEEEETTSC------
T ss_pred ceEEEEECC-CEEEEEeCCC-----eEEEEECCCCCEEEEEcCC--c-----ccEEEEEE-eCCEEEEEeCCCe------
Confidence 223334455 5666676654 5889999877322222111 1 11222333 4556666665432
Q ss_pred eEEeecCCCCeEEEEECCCCCCCCcceeeEEEeCCEEEEEcCcCCCCCccccCCcEEEEECCCCeEEE
Q 002047 310 AYGLAKHRDGRWEWAIAPGVSPSPRYQHAAVFVNARLHVSGGALGGGRMVEDSSSVAVLDTAAGVWCD 377 (975)
Q Consensus 310 ~~~~~~~~~~~W~w~~~~g~~P~~R~~hs~v~~~~~L~V~GG~~~~~~~~~~~~dv~~yD~~t~~W~~ 377 (975)
+..++.... .-..... +.. .......++..++.+++.|+.+ ..|.+||+.+.+...
T Consensus 341 i~vwd~~~~-~~~~~~~-~~~-~~~~~v~~~~~~~~~l~s~~~d---------g~v~iwd~~~~~~~~ 396 (445)
T 2ovr_B 341 VKIWDIKTG-QCLQTLQ-GPN-KHQSAVTCLQFNKNFVITSSDD---------GTVKLWDLKTGEFIR 396 (445)
T ss_dssp EEEEETTTC-CEEEEEC-STT-SCSSCEEEEEECSSEEEEEETT---------SEEEEEETTTCCEEE
T ss_pred EEEEECCCC-cEEEEEc-cCC-CCCCCEEEEEECCCEEEEEeCC---------CeEEEEECCCCceee
Confidence 333433322 2122211 110 1112223344466777777753 348899999887544
No 89
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=93.15 E-value=3.4 Score=43.81 Aligned_cols=200 Identities=15% Similarity=0.061 Sum_probs=115.1
Q ss_pred eEEEEeCCEEEEEeccCCCCCccccEEEEEcCCCCCcEEEEEecCCCCCCCcccEEEEeCCcEEEEEcCCCCCCCCCcEE
Q 002047 178 HVATAVGTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGPRYGHVMALVGQRYLMAIGGNDGKRPLADVW 257 (975)
Q Consensus 178 hsa~~~~~~iyv~GG~~~~~~~~~dv~~yD~~t~~~~W~~v~~~g~~P~~R~~h~~~~~~~~~lyV~GG~~g~~~~ndv~ 257 (975)
.+....++.||+..|.. ..+.++|+.+....-+. ++..-++.+++..++ +||+.... -+.++
T Consensus 58 qGL~~~~~~Ly~stG~~------g~v~~iD~~Tgkv~~~~------l~~~~FgeGit~~g~-~Ly~ltw~-----~~~v~ 119 (268)
T 3nok_A 58 QGLVFHQGHFFESTGHQ------GTLRQLSLESAQPVWME------RLGNIFAEGLASDGE-RLYQLTWT-----EGLLF 119 (268)
T ss_dssp EEEEEETTEEEEEETTT------TEEEECCSSCSSCSEEE------ECTTCCEEEEEECSS-CEEEEESS-----SCEEE
T ss_pred ceEEEECCEEEEEcCCC------CEEEEEECCCCcEEeEE------CCCCcceeEEEEeCC-EEEEEEcc-----CCEEE
Confidence 56666688999999863 23899999987422222 233445667777776 89998653 36899
Q ss_pred EEECCCCCcEEEE-ccCCCCCCCCcceeEEEEEeCCeEEEecCCCCCCCCccceEEeecCCCCeEEEEECCCCCCCCcce
Q 002047 258 ALDTAAKPYEWRK-LEPEGEGPPPCMYATASARSDGLLLLCGGRDASSVPLASAYGLAKHRDGRWEWAIAPGVSPSPRYQ 336 (975)
Q Consensus 258 ~yDl~s~~~~W~~-v~~~~~~P~~r~~~~a~~~~~g~lyvfGG~~~~~~~l~d~~~~~~~~~~~W~w~~~~g~~P~~R~~ 336 (975)
+||+.+. +-.. +...+ ..-+++..+++||+.-| .+.++.+|+.+...-.-+.+... +.+...
T Consensus 120 V~D~~Tl--~~~~ti~~~~-------eGwGLt~Dg~~L~vSdG-------s~~l~~iDp~T~~v~~~I~V~~~-g~~v~~ 182 (268)
T 3nok_A 120 TWSGMPP--QRERTTRYSG-------EGWGLCYWNGKLVRSDG-------GTMLTFHEPDGFALVGAVQVKLR-GQPVEL 182 (268)
T ss_dssp EEETTTT--EEEEEEECSS-------CCCCEEEETTEEEEECS-------SSEEEEECTTTCCEEEEEECEET-TEECCC
T ss_pred EEECCcC--cEEEEEeCCC-------ceeEEecCCCEEEEECC-------CCEEEEEcCCCCeEEEEEEeCCC-Cccccc
Confidence 9999887 4332 22211 12345566889999865 23577777766544444444321 222111
Q ss_pred -eeEEEeCCEEEEEcCcCCCCCccccCCcEEEEECCCCe---EEEcccCcCC-CCCCCCccccCCCCCccCCCccceeEE
Q 002047 337 -HAAVFVNARLHVSGGALGGGRMVEDSSSVAVLDTAAGV---WCDTKSVVTS-PRTGRYSADAAGGDAAVELTRRCRHAA 411 (975)
Q Consensus 337 -hs~v~~~~~L~V~GG~~~~~~~~~~~~dv~~yD~~t~~---W~~v~~~~~~-p~~~~~~~~~~~~~~~~~p~~R~~hsa 411 (975)
--+...+++||+-- ...++|.+.|+++++ |..+..+... +.. .....-.--+.
T Consensus 183 lNeLe~~dG~lyanv---------w~s~~I~vIDp~TG~V~~~Idl~~L~~~~~~~-------------~~~~~~vlNGI 240 (268)
T 3nok_A 183 INELECANGVIYANI---------WHSSDVLEIDPATGTVVGVIDASALTRAVAGQ-------------VTNPEAVLNGI 240 (268)
T ss_dssp EEEEEEETTEEEEEE---------TTCSEEEEECTTTCBEEEEEECHHHHHHHTTT-------------CCCTTCCEEEE
T ss_pred ccccEEeCCEEEEEE---------CCCCeEEEEeCCCCcEEEEEECCCCccccccc-------------ccCcCCceEEE
Confidence 12445588888631 125679999999985 4444432100 000 00001122344
Q ss_pred EEE--CCEEEEEcCCCCCCCccceEeeecc
Q 002047 412 AAV--GDLIFIYGGLRGGVLLDDLLVAEDL 439 (975)
Q Consensus 412 ~~~--~~~LyV~GG~~~~~~l~Dv~~ld~~ 439 (975)
+.. +++|||.|= ++..+|.+.++
T Consensus 241 A~dp~~~rlfVTGK-----~Wp~~~ev~~~ 265 (268)
T 3nok_A 241 AVEPGSGRIFMTGK-----LWPRLFEVRLD 265 (268)
T ss_dssp EECTTTCCEEEEET-----TCSEEEEEEEE
T ss_pred EEcCCCCEEEEeCC-----CCCceEEEEEE
Confidence 444 578999884 56777766553
No 90
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=93.02 E-value=3.7 Score=45.50 Aligned_cols=193 Identities=10% Similarity=-0.021 Sum_probs=92.2
Q ss_pred cEEEEECCCCcEEEecCCCCCCCCccceEEEEe-CCEEEEEeccCCCCCccccEEEEEcCCCCCcEEEEEecCCCCCCCc
Q 002047 151 DVHCYDVLTNKWSRITPFGEPPTPRAAHVATAV-GTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGPRY 229 (975)
Q Consensus 151 dv~~yD~~t~~W~~l~~~g~~P~pR~~hsa~~~-~~~iyv~GG~~~~~~~~~dv~~yD~~t~~~~W~~v~~~g~~P~~R~ 229 (975)
.+|.+|+.+..+..+... +.+..-.+++.. ++.+++.++. ...+++||+.+.. .......+.......
T Consensus 102 ~l~~~d~~~~~~~~~~~~---~~~~~~~~~~~s~~~~~~~~~~~------~~~i~~~d~~~g~--~~~~~~~~~~~~~~~ 170 (433)
T 3bws_A 102 KLIALDKEGITHRFISRF---KTGFQPKSVRFIDNTRLAIPLLE------DEGMDVLDINSGQ--TVRLSPPEKYKKKLG 170 (433)
T ss_dssp CEEECCBTTCSEEEEEEE---ECSSCBCCCEESSSSEEEEEBTT------SSSEEEEETTTCC--EEEECCCHHHHTTCC
T ss_pred EEEEECCCCCcceEEEEE---cCCCCceEEEEeCCCeEEEEeCC------CCeEEEEECCCCe--EeeecCcccccccCC
Confidence 788888877766655432 111112223333 5678877764 2469999998764 333221101111111
Q ss_pred cc-EEEEeCCcEEEEEcCCCCCCCCCcEEEEECCCCCcEEEEccCCCCCCCCcceeEEEEEe-CCeEEEecCCCCCCCCc
Q 002047 230 GH-VMALVGQRYLMAIGGNDGKRPLADVWALDTAAKPYEWRKLEPEGEGPPPCMYATASARS-DGLLLLCGGRDASSVPL 307 (975)
Q Consensus 230 ~h-~~~~~~~~~lyV~GG~~g~~~~ndv~~yDl~s~~~~W~~v~~~~~~P~~r~~~~a~~~~-~g~lyvfGG~~~~~~~l 307 (975)
.. +++.-.++.+|+.|+.+ ..+.+||+.+....+... .... .....+... +..+|+.++.++
T Consensus 171 ~v~~~~~~~~~~~~~s~~~d-----~~v~~~d~~~~~~~~~~~-~~~~-----~~~~~~~~~~~~~l~~~~~~~~----- 234 (433)
T 3bws_A 171 FVETISIPEHNELWVSQMQA-----NAVHVFDLKTLAYKATVD-LTGK-----WSKILLYDPIRDLVYCSNWISE----- 234 (433)
T ss_dssp EEEEEEEGGGTEEEEEEGGG-----TEEEEEETTTCCEEEEEE-CSSS-----SEEEEEEETTTTEEEEEETTTT-----
T ss_pred ceeEEEEcCCCEEEEEECCC-----CEEEEEECCCceEEEEEc-CCCC-----CeeEEEEcCCCCEEEEEecCCC-----
Confidence 11 22222344788877654 368999998863333322 1111 112222333 445666665432
Q ss_pred cceEEeecCCCCeEEEEECCCCCCCCcceeeEEEe-CCEEEEEcCcCCCCCccccCCcEEEEECCCCeEEEc
Q 002047 308 ASAYGLAKHRDGRWEWAIAPGVSPSPRYQHAAVFV-NARLHVSGGALGGGRMVEDSSSVAVLDTAAGVWCDT 378 (975)
Q Consensus 308 ~d~~~~~~~~~~~W~w~~~~g~~P~~R~~hs~v~~-~~~L~V~GG~~~~~~~~~~~~dv~~yD~~t~~W~~v 378 (975)
.++.++.... ...+.. . ....-.++++. ++..+++++...... ......|++||+.+.+-...
T Consensus 235 -~i~~~d~~~~-~~~~~~-~----~~~~~~~~~~~~~g~~l~~~~~~~~~~-~~~dg~i~~~d~~~~~~~~~ 298 (433)
T 3bws_A 235 -DISVIDRKTK-LEIRKT-D----KIGLPRGLLLSKDGKELYIAQFSASNQ-ESGGGRLGIYSMDKEKLIDT 298 (433)
T ss_dssp -EEEEEETTTT-EEEEEC-C----CCSEEEEEEECTTSSEEEEEEEESCTT-CSCCEEEEEEETTTTEEEEE
T ss_pred -cEEEEECCCC-cEEEEe-c----CCCCceEEEEcCCCCEEEEEECCCCcc-ccCCCeEEEEECCCCcEEee
Confidence 3555554433 332221 1 11112333333 444444454322211 00134699999998865443
No 91
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=92.99 E-value=12 Score=41.06 Aligned_cols=93 Identities=11% Similarity=0.074 Sum_probs=49.6
Q ss_pred cEEEEECCCCcEEEecCCCCCCCCccceEEEEe-CCEEEEEeccCCCCCccccEEEEEcCCCCCcEEEEEecCCCCCCCc
Q 002047 151 DVHCYDVLTNKWSRITPFGEPPTPRAAHVATAV-GTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGPRY 229 (975)
Q Consensus 151 dv~~yD~~t~~W~~l~~~g~~P~pR~~hsa~~~-~~~iyv~GG~~~~~~~~~dv~~yD~~t~~~~W~~v~~~g~~P~~R~ 229 (975)
.+..||+.+..-...-.. ....-.+++.. ++.+++.|+. ...+.+||+.+... -..+. + ....
T Consensus 120 ~i~iwd~~~~~~~~~~~~----h~~~v~~~~~~~~~~~l~s~s~------d~~i~iwd~~~~~~-~~~~~--~---h~~~ 183 (420)
T 3vl1_A 120 DIKVLDSNFNLQREIDQA----HVSEITKLKFFPSGEALISSSQ------DMQLKIWSVKDGSN-PRTLI--G---HRAT 183 (420)
T ss_dssp CEEEECTTSCEEEEETTS----SSSCEEEEEECTTSSEEEEEET------TSEEEEEETTTCCC-CEEEE--C---CSSC
T ss_pred CEEEEeCCCcceeeeccc----ccCccEEEEECCCCCEEEEEeC------CCeEEEEeCCCCcC-ceEEc--C---CCCc
Confidence 678888887665444211 11112233333 3456666664 35799999987531 22222 1 1111
Q ss_pred ccEEEEeCCcEEEEEcCCCCCCCCCcEEEEECCCC
Q 002047 230 GHVMALVGQRYLMAIGGNDGKRPLADVWALDTAAK 264 (975)
Q Consensus 230 ~h~~~~~~~~~lyV~GG~~g~~~~ndv~~yDl~s~ 264 (975)
-.+++...++.+++.|+.++ .+..||+.+.
T Consensus 184 v~~~~~~~~~~~l~s~~~d~-----~v~iwd~~~~ 213 (420)
T 3vl1_A 184 VTDIAIIDRGRNVLSASLDG-----TIRLWECGTG 213 (420)
T ss_dssp EEEEEEETTTTEEEEEETTS-----CEEEEETTTT
T ss_pred EEEEEEcCCCCEEEEEcCCC-----cEEEeECCCC
Confidence 22333343445666777664 5888999877
No 92
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=92.77 E-value=3.5 Score=46.30 Aligned_cols=189 Identities=12% Similarity=0.133 Sum_probs=97.1
Q ss_pred CcEEEEECCCCcEEEecCCCCCCCCccceEEEEe-CC-EEEEEeccCCCCCccccEEEEEcCCCCCcEEEEEecCCCCCC
Q 002047 150 ADVHCYDVLTNKWSRITPFGEPPTPRAAHVATAV-GT-MVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGP 227 (975)
Q Consensus 150 ~dv~~yD~~t~~W~~l~~~g~~P~pR~~hsa~~~-~~-~iyv~GG~~~~~~~~~dv~~yD~~t~~~~W~~v~~~g~~P~~ 227 (975)
..++.+|+.+.+...+... + ....+.+.. ++ +|++.+... ....+|++|+.+.. ...+. . ..
T Consensus 203 ~~i~~~d~~tg~~~~l~~~---~--~~~~~~~~spdg~~la~~~~~~----g~~~i~~~d~~~~~--~~~l~---~--~~ 266 (415)
T 2hqs_A 203 SALVIQTLANGAVRQVASF---P--RHNGAPAFSPDGSKLAFALSKT----GSLNLYVMDLASGQ--IRQVT---D--GR 266 (415)
T ss_dssp CEEEEEETTTCCEEEEECC---S--SCEEEEEECTTSSEEEEEECTT----SSCEEEEEETTTCC--EEECC---C--CS
T ss_pred cEEEEEECCCCcEEEeecC---C--CcccCEEEcCCCCEEEEEEecC----CCceEEEEECCCCC--EEeCc---C--CC
Confidence 4799999999888776543 1 112222222 33 555554431 13479999998763 44443 1 11
Q ss_pred CcccEEEEe-CCcEEEEEcCCCCCCCCCcEEEEECCCCCcEEEEccCCCCCCCCcceeEEEEEeCCeEEEecCCCCCCCC
Q 002047 228 RYGHVMALV-GQRYLMAIGGNDGKRPLADVWALDTAAKPYEWRKLEPEGEGPPPCMYATASARSDGLLLLCGGRDASSVP 306 (975)
Q Consensus 228 R~~h~~~~~-~~~~lyV~GG~~g~~~~ndv~~yDl~s~~~~W~~v~~~~~~P~~r~~~~a~~~~~g~lyvfGG~~~~~~~ 306 (975)
..-...+.. +++.|++.+..++ ...+|.+|+.+. +-..+.... ..........+++.+++++.+..
T Consensus 267 ~~~~~~~~spdg~~l~~~s~~~g---~~~i~~~d~~~~--~~~~l~~~~-----~~~~~~~~spdG~~l~~~~~~~g--- 333 (415)
T 2hqs_A 267 SNNTEPTWFPDSQNLAFTSDQAG---RPQVYKVNINGG--APQRITWEG-----SQNQDADVSSDGKFMVMVSSNGG--- 333 (415)
T ss_dssp SCEEEEEECTTSSEEEEEECTTS---SCEEEEEETTSS--CCEECCCSS-----SEEEEEEECTTSSEEEEEEECSS---
T ss_pred CcccceEECCCCCEEEEEECCCC---CcEEEEEECCCC--CEEEEecCC-----CcccCeEECCCCCEEEEEECcCC---
Confidence 111222222 3333444432222 347999999887 444443221 12223333456666666654321
Q ss_pred ccceEEeecCCCCeEEEEECCCCCCCCcceeeEEEe-CCEEEEEcCcCCCCCccccCCcEEEEECCCCeEEEccc
Q 002047 307 LASAYGLAKHRDGRWEWAIAPGVSPSPRYQHAAVFV-NARLHVSGGALGGGRMVEDSSSVAVLDTAAGVWCDTKS 380 (975)
Q Consensus 307 l~d~~~~~~~~~~~W~w~~~~g~~P~~R~~hs~v~~-~~~L~V~GG~~~~~~~~~~~~dv~~yD~~t~~W~~v~~ 380 (975)
...++.++.... .. ..+... . ...+.++. +++++++++.++. ...||++|+.+.....+..
T Consensus 334 ~~~i~~~d~~~~-~~--~~l~~~---~-~~~~~~~spdg~~l~~~s~~~~------~~~l~~~d~~g~~~~~l~~ 395 (415)
T 2hqs_A 334 QQHIAKQDLATG-GV--QVLSST---F-LDETPSLAPNGTMVIYSSSQGM------GSVLNLVSTDGRFKARLPA 395 (415)
T ss_dssp CEEEEEEETTTC-CE--EECCCS---S-SCEEEEECTTSSEEEEEEEETT------EEEEEEEETTSCCEEECCC
T ss_pred ceEEEEEECCCC-CE--EEecCC---C-CcCCeEEcCCCCEEEEEEcCCC------ccEEEEEECCCCcEEEeeC
Confidence 245666655543 32 233321 1 22223333 5666667664332 2369999999887776654
No 93
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=92.70 E-value=3.9 Score=45.24 Aligned_cols=183 Identities=14% Similarity=0.129 Sum_probs=91.1
Q ss_pred CcEEEEECCCCcEEEecCCCCCCCCccceEEEEe-CCEEEEEeccCCCCCccccEEEEEcCCCCCcEEEEEecCCCCCCC
Q 002047 150 ADVHCYDVLTNKWSRITPFGEPPTPRAAHVATAV-GTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGPR 228 (975)
Q Consensus 150 ~dv~~yD~~t~~W~~l~~~g~~P~pR~~hsa~~~-~~~iyv~GG~~~~~~~~~dv~~yD~~t~~~~W~~v~~~g~~P~~R 228 (975)
..++.||..+.......... ....-.+++.. ++.+++.|+. ...+.+||+.+.. ....- ....
T Consensus 113 ~~v~lw~~~~~~~~~~~~~~---~~~~v~~v~~s~~~~~l~~~~~------dg~i~iwd~~~~~--~~~~~-----~~~~ 176 (401)
T 4aez_A 113 RNVYVWNADSGSVSALAETD---ESTYVASVKWSHDGSFLSVGLG------NGLVDIYDVESQT--KLRTM-----AGHQ 176 (401)
T ss_dssp TEEEEEETTTCCEEEEEECC---TTCCEEEEEECTTSSEEEEEET------TSCEEEEETTTCC--EEEEE-----CCCS
T ss_pred CeEEEeeCCCCcEeEeeecC---CCCCEEEEEECCCCCEEEEECC------CCeEEEEECcCCe--EEEEe-----cCCC
Confidence 37899999988876664431 11112222222 4456666664 2468999998763 22211 1122
Q ss_pred cccEEEEeCCcEEEEEcCCCCCCCCCcEEEEECCCCCcEEEEccCCCCCCCCcceeEEEEEeCCeEEEecCCCCCCCCcc
Q 002047 229 YGHVMALVGQRYLMAIGGNDGKRPLADVWALDTAAKPYEWRKLEPEGEGPPPCMYATASARSDGLLLLCGGRDASSVPLA 308 (975)
Q Consensus 229 ~~h~~~~~~~~~lyV~GG~~g~~~~ndv~~yDl~s~~~~W~~v~~~~~~P~~r~~~~a~~~~~g~lyvfGG~~~~~~~l~ 308 (975)
..-..+.+++ .+++.|+.++ .+..||+......-..+..... .........++.+++.|+.++.
T Consensus 177 ~~v~~~~~~~-~~l~~~~~dg-----~i~i~d~~~~~~~~~~~~~~~~-----~v~~~~~~~~~~~l~s~~~d~~----- 240 (401)
T 4aez_A 177 ARVGCLSWNR-HVLSSGSRSG-----AIHHHDVRIANHQIGTLQGHSS-----EVCGLAWRSDGLQLASGGNDNV----- 240 (401)
T ss_dssp SCEEEEEEET-TEEEEEETTS-----EEEEEETTSSSCEEEEEECCSS-----CEEEEEECTTSSEEEEEETTSC-----
T ss_pred CceEEEEECC-CEEEEEcCCC-----CEEEEecccCcceeeEEcCCCC-----CeeEEEEcCCCCEEEEEeCCCe-----
Confidence 2233344455 5777777654 6888998743112222221111 1222233346777888876542
Q ss_pred ceEEeecCCCCeEEEEECCCCCCCCcceeeEEEe--CCEEEEEcCcCCCCCccccCCcEEEEECCCCeEEE
Q 002047 309 SAYGLAKHRDGRWEWAIAPGVSPSPRYQHAAVFV--NARLHVSGGALGGGRMVEDSSSVAVLDTAAGVWCD 377 (975)
Q Consensus 309 d~~~~~~~~~~~W~w~~~~g~~P~~R~~hs~v~~--~~~L~V~GG~~~~~~~~~~~~dv~~yD~~t~~W~~ 377 (975)
+..++.... .-...... ....-.++++. +..+++.||-.. ...+.+||+.+.+-..
T Consensus 241 -v~iwd~~~~-~~~~~~~~----~~~~v~~~~~~p~~~~ll~~~~gs~-------d~~i~i~d~~~~~~~~ 298 (401)
T 4aez_A 241 -VQIWDARSS-IPKFTKTN----HNAAVKAVAWCPWQSNLLATGGGTM-------DKQIHFWNAATGARVN 298 (401)
T ss_dssp -EEEEETTCS-SEEEEECC----CSSCCCEEEECTTSTTEEEEECCTT-------TCEEEEEETTTCCEEE
T ss_pred -EEEccCCCC-CccEEecC----CcceEEEEEECCCCCCEEEEecCCC-------CCEEEEEECCCCCEEE
Confidence 333333322 11222111 11112233333 446777775211 2348899998876543
No 94
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=92.63 E-value=4.5 Score=47.96 Aligned_cols=111 Identities=16% Similarity=0.261 Sum_probs=61.4
Q ss_pred cEEEEECCCCc--EEEecCCCCCCCCc---cceEEEEeCCEEEEEeccCCCCCccccEEEEEcCCCCCcEEEEEecCCCC
Q 002047 151 DVHCYDVLTNK--WSRITPFGEPPTPR---AAHVATAVGTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGP 225 (975)
Q Consensus 151 dv~~yD~~t~~--W~~l~~~g~~P~pR---~~hsa~~~~~~iyv~GG~~~~~~~~~dv~~yD~~t~~~~W~~v~~~g~~P 225 (975)
.++.||..+.+ |+.-........+. ...+.++.+++||+... ...++.+|..+....|+.-. ..+
T Consensus 79 ~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~g~a~~~~~v~~~t~-------dg~l~AlD~~TG~~~W~~~~---~~~ 148 (582)
T 1flg_A 79 RLFALDAKTGKRLWTYNHRLPDDIRPCCDVVNRGAAIYGDKVFFGTL-------DASVVALNKNTGKVVWKKKF---ADH 148 (582)
T ss_dssp EEEEEESSSCCEEEEEECCCCTTCCCSSCSCCCCCEEETTEEEEEET-------TTEEEEEESSSCCEEEEEEC---SCG
T ss_pred CEEEEECCCCcEEEEEcCCCCcccccccccCCCccEEECCEEEEEeC-------CCEEEEEECCCCCEEeeecC---CCC
Confidence 38899998764 88754331100111 12344567888887532 35799999998877798643 111
Q ss_pred CCCc--ccEEEEeCC----cEEEEEcCCCC-CCCCCcEEEEECCCCCcEEEEc
Q 002047 226 GPRY--GHVMALVGQ----RYLMAIGGNDG-KRPLADVWALDTAAKPYEWRKL 271 (975)
Q Consensus 226 ~~R~--~h~~~~~~~----~~lyV~GG~~g-~~~~ndv~~yDl~s~~~~W~~v 271 (975)
...+ ..+-++.++ +.++++|...+ ...-..++.||+.+....|+.-
T Consensus 149 ~~~~~~~~sP~v~~~~~~G~~~v~vg~~~~e~~~~g~v~alD~~tG~~~W~~~ 201 (582)
T 1flg_A 149 GAGYTMTGAPTIVKDGKTGKVLLIHGSSGDEFGVVGRLFARDPDTGEEIWMRP 201 (582)
T ss_dssp GGTCBCCSCCEEEECTTTCCEEEEECCBCGGGCCBCEEEEECTTTCCEEEEEE
T ss_pred CcCcccccCCEEeCCCcCCcEEEEEeccccccCCCCEEEEEECCCCCEEeecC
Confidence 1111 112223332 11334443211 1224579999999988899753
No 95
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=92.53 E-value=12 Score=39.58 Aligned_cols=192 Identities=11% Similarity=0.049 Sum_probs=94.2
Q ss_pred cCcEEEEECCCCcEEEecCCCCCCCCccceEEEEe--CCEEEEEeccCCCCCccccEEEEEcCCCCCcEEEEEecCCCCC
Q 002047 149 TADVHCYDVLTNKWSRITPFGEPPTPRAAHVATAV--GTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPG 226 (975)
Q Consensus 149 ~~dv~~yD~~t~~W~~l~~~g~~P~pR~~hsa~~~--~~~iyv~GG~~~~~~~~~dv~~yD~~t~~~~W~~v~~~g~~P~ 226 (975)
.+.++.+|+.+.+.......+. + -++++.. ++.+|+.++. .+.+++||+.+....+ .+.. +....
T Consensus 68 ~~~v~~~d~~~~~~~~~~~~~~----~-~~~~~~s~dg~~l~v~~~~------~~~v~~~d~~~~~~~~-~~~~-~~~~~ 134 (353)
T 3vgz_A 68 GGVVYRLDPVTLEVTQAIHNDL----K-PFGATINNTTQTLWFGNTV------NSAVTAIDAKTGEVKG-RLVL-DDRKR 134 (353)
T ss_dssp SEEEEEECTTTCCEEEEEEESS----C-CCSEEEETTTTEEEEEETT------TTEEEEEETTTCCEEE-EEES-CCCCC
T ss_pred CccEEEEcCCCCeEEEEEecCC----C-cceEEECCCCCEEEEEecC------CCEEEEEeCCCCeeEE-EEec-CCCcc
Confidence 4578999998876554433221 1 2233333 3467877653 2479999998864222 2321 11111
Q ss_pred -----CCcccEEEEe-CCcEEEEEcCCCCCCCCCcEEEEECCCCCcEEEEccCCCCCCCCcceeEEEEEeCCeEEEecCC
Q 002047 227 -----PRYGHVMALV-GQRYLMAIGGNDGKRPLADVWALDTAAKPYEWRKLEPEGEGPPPCMYATASARSDGLLLLCGGR 300 (975)
Q Consensus 227 -----~R~~h~~~~~-~~~~lyV~GG~~g~~~~ndv~~yDl~s~~~~W~~v~~~~~~P~~r~~~~a~~~~~g~lyvfGG~ 300 (975)
+..-+.+++. +++.+|+.+... -..+++||+.+....+.. ...+.. ....+....++.+|+...
T Consensus 135 ~~~~~~~~~~~~~~s~dg~~l~~~~~~~----~~~i~~~d~~~~~~~~~~-~~~~~~----~~~~~~s~dg~~l~~~~~- 204 (353)
T 3vgz_A 135 TEEVRPLQPRELVADDATNTVYISGIGK----ESVIWVVDGGNIKLKTAI-QNTGKM----STGLALDSEGKRLYTTNA- 204 (353)
T ss_dssp CSSCCCCEEEEEEEETTTTEEEEEEESS----SCEEEEEETTTTEEEEEE-CCCCTT----CCCCEEETTTTEEEEECT-
T ss_pred ccccCCCCCceEEECCCCCEEEEEecCC----CceEEEEcCCCCceEEEe-cCCCCc----cceEEECCCCCEEEEEcC-
Confidence 1112333333 344688776322 246999999887323322 212221 112222223445666533
Q ss_pred CCCCCCccceEEeecCCCCeEEEEECCCCCCCCcceeeEEEe--CCEEEEEcCcCCCCCccccCCcEEEEECCCCeEEEc
Q 002047 301 DASSVPLASAYGLAKHRDGRWEWAIAPGVSPSPRYQHAAVFV--NARLHVSGGALGGGRMVEDSSSVAVLDTAAGVWCDT 378 (975)
Q Consensus 301 ~~~~~~l~d~~~~~~~~~~~W~w~~~~g~~P~~R~~hs~v~~--~~~L~V~GG~~~~~~~~~~~~dv~~yD~~t~~W~~v 378 (975)
+ ..++.++..+. +-.+....+.........++++. ++.+|+.... .+.+++||+.+.+....
T Consensus 205 ~------~~i~~~d~~~~-~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~---------~~~v~~~d~~~~~~~~~ 268 (353)
T 3vgz_A 205 D------GELITIDTADN-KILSRKKLLDDGKEHFFINISLDTARQRAFITDSK---------AAEVLVVDTRNGNILAK 268 (353)
T ss_dssp T------SEEEEEETTTT-EEEEEEECCCSSSCCCEEEEEEETTTTEEEEEESS---------SSEEEEEETTTCCEEEE
T ss_pred C------CeEEEEECCCC-eEEEEEEcCCCCCCcccceEEECCCCCEEEEEeCC---------CCEEEEEECCCCcEEEE
Confidence 1 34556655433 33333222111111222233443 4567776431 35699999998876544
Q ss_pred c
Q 002047 379 K 379 (975)
Q Consensus 379 ~ 379 (975)
-
T Consensus 269 ~ 269 (353)
T 3vgz_A 269 V 269 (353)
T ss_dssp E
T ss_pred E
Confidence 3
No 96
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=92.02 E-value=4.2 Score=43.65 Aligned_cols=197 Identities=10% Similarity=0.115 Sum_probs=96.3
Q ss_pred cEEEEECCCCcEEEecCCCCCCCCccceEEEEe-C--CEEEEEeccCCCCCccccEEEEEcCCCCCcEEEEEecCCCCCC
Q 002047 151 DVHCYDVLTNKWSRITPFGEPPTPRAAHVATAV-G--TMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGP 227 (975)
Q Consensus 151 dv~~yD~~t~~W~~l~~~g~~P~pR~~hsa~~~-~--~~iyv~GG~~~~~~~~~dv~~yD~~t~~~~W~~v~~~g~~P~~ 227 (975)
.+..||+.+..|..+.... .....-.+++.. + +.+++.|+. ...+.+||+.+.. ........+ ..
T Consensus 80 ~v~iwd~~~~~~~~~~~~~--~~~~~v~~~~~~~~~~~~~l~~~~~------d~~i~v~d~~~~~-~~~~~~~~~---~~ 147 (379)
T 3jrp_A 80 KVLIWKEENGRWSQIAVHA--VHSASVNSVQWAPHEYGPLLLVASS------DGKVSVVEFKENG-TTSPIIIDA---HA 147 (379)
T ss_dssp CEEEEEEETTEEEEEEEEC--CCSSCEEEEEECCGGGCSEEEEEET------TSEEEEEECCTTS-CCCEEEEEC---CT
T ss_pred EEEEEEcCCCceeEeeeec--CCCcceEEEEeCCCCCCCEEEEecC------CCcEEEEecCCCC-ceeeEEecC---CC
Confidence 6788999998887765441 111112222222 2 456666664 3578899988752 122221111 11
Q ss_pred CcccEEEEeC-------------CcEEEEEcCCCCCCCCCcEEEEECCCCCcEEEEccCCCCCCCCcceeEEEEEeC---
Q 002047 228 RYGHVMALVG-------------QRYLMAIGGNDGKRPLADVWALDTAAKPYEWRKLEPEGEGPPPCMYATASARSD--- 291 (975)
Q Consensus 228 R~~h~~~~~~-------------~~~lyV~GG~~g~~~~ndv~~yDl~s~~~~W~~v~~~~~~P~~r~~~~a~~~~~--- 291 (975)
..-.+++... ++.+++.|+.++ .+..||+.+....|..+....... ......+...+
T Consensus 148 ~~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg-----~i~i~d~~~~~~~~~~~~~~~~h~--~~v~~~~~sp~~~~ 220 (379)
T 3jrp_A 148 IGVNSASWAPATIEEDGEHNGTKESRKFVTGGADN-----LVKIWKYNSDAQTYVLESTLEGHS--DWVRDVAWSPTVLL 220 (379)
T ss_dssp TCEEEEEECCCC----------CTTCEEEEEETTS-----CEEEEEEETTTTEEEEEEEECCCS--SCEEEEEECCCCSS
T ss_pred CceEEEEEcCccccccccccCCCCCCEEEEEeCCC-----eEEEEEecCCCcceeeEEEEeccc--CcEeEEEECCCCCC
Confidence 1111222222 236777777665 577888766533565543322110 11222223334
Q ss_pred CeEEEecCCCCCCCCccceEEeecCCCCeEEEEECCCCCCCCcceeeEEEe-CCEEEEEcCcCCCCCccccCCcEEEEEC
Q 002047 292 GLLLLCGGRDASSVPLASAYGLAKHRDGRWEWAIAPGVSPSPRYQHAAVFV-NARLHVSGGALGGGRMVEDSSSVAVLDT 370 (975)
Q Consensus 292 g~lyvfGG~~~~~~~l~d~~~~~~~~~~~W~w~~~~g~~P~~R~~hs~v~~-~~~L~V~GG~~~~~~~~~~~~dv~~yD~ 370 (975)
+.+++.|+.++. -.+|.+..... .+........ .....-.++++. ++.++++|+.++ .+.+||+
T Consensus 221 ~~~l~s~~~dg~----i~iwd~~~~~~-~~~~~~~~~~-~~~~~v~~~~~s~~g~~l~~~~~dg---------~i~iw~~ 285 (379)
T 3jrp_A 221 RSYLASVSQDRT----CIIWTQDNEQG-PWKKTLLKEE-KFPDVLWRASWSLSGNVLALSGGDN---------KVTLWKE 285 (379)
T ss_dssp SEEEEEEETTSC----EEEEEESSTTS-CCEEEESSSS-CCSSCEEEEEECSSSCCEEEEESSS---------SEEEEEE
T ss_pred CCeEEEEeCCCE----EEEEeCCCCCc-cceeeeeccc-cCCCcEEEEEEcCCCCEEEEecCCC---------cEEEEeC
Confidence 688888876643 23444433211 2222222211 112222233332 566777776533 2667777
Q ss_pred C-CCeEEEcccC
Q 002047 371 A-AGVWCDTKSV 381 (975)
Q Consensus 371 ~-t~~W~~v~~~ 381 (975)
. ...|..+...
T Consensus 286 ~~~~~~~~~~~~ 297 (379)
T 3jrp_A 286 NLEGKWEPAGEV 297 (379)
T ss_dssp EETTEEEEEEEE
T ss_pred CCCCccccccce
Confidence 6 5688887765
No 97
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=91.60 E-value=10 Score=40.57 Aligned_cols=134 Identities=14% Similarity=0.157 Sum_probs=64.2
Q ss_pred CcEEEEECCCCcEEEecCCCCCCCCccceEEEEe-CCEEEEEeccCCCCCccccEEEEEcCCCCCcEEEEEecCCCCCCC
Q 002047 150 ADVHCYDVLTNKWSRITPFGEPPTPRAAHVATAV-GTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGPR 228 (975)
Q Consensus 150 ~dv~~yD~~t~~W~~l~~~g~~P~pR~~hsa~~~-~~~iyv~GG~~~~~~~~~dv~~yD~~t~~~~W~~v~~~g~~P~~R 228 (975)
..+.+||+.+..|..+.... .....-.+++.. ++.+++.|+. ...+.+||+.+.. +....... ....
T Consensus 30 ~~v~i~~~~~~~~~~~~~~~--~h~~~v~~~~~~~~~~~l~~~~~------dg~i~vwd~~~~~--~~~~~~~~--~~~~ 97 (372)
T 1k8k_C 30 HEVHIYEKSGNKWVQVHELK--EHNGQVTGVDWAPDSNRIVTCGT------DRNAYVWTLKGRT--WKPTLVIL--RINR 97 (372)
T ss_dssp SEEEEEEEETTEEEEEEEEE--CCSSCEEEEEEETTTTEEEEEET------TSCEEEEEEETTE--EEEEEECC--CCSS
T ss_pred CEEEEEeCCCCcEEeeeeec--CCCCcccEEEEeCCCCEEEEEcC------CCeEEEEECCCCe--eeeeEEee--cCCC
Confidence 36888999888766554331 111112223333 4456666664 2468899987753 54443111 1122
Q ss_pred cccEEEEeCCcEEEEEcCCCCCCCCCcEEEEECCCCCcEEEEccCCCCCCCCcceeEEEEEeCCeEEEecCCCC
Q 002047 229 YGHVMALVGQRYLMAIGGNDGKRPLADVWALDTAAKPYEWRKLEPEGEGPPPCMYATASARSDGLLLLCGGRDA 302 (975)
Q Consensus 229 ~~h~~~~~~~~~lyV~GG~~g~~~~ndv~~yDl~s~~~~W~~v~~~~~~P~~r~~~~a~~~~~g~lyvfGG~~~ 302 (975)
.-.++....++.+++.|+.++ .+..||+.+....+........ ............++.+++.|+.++
T Consensus 98 ~v~~~~~~~~~~~l~~~~~d~-----~v~i~d~~~~~~~~~~~~~~~~--~~~~i~~~~~~~~~~~l~~~~~dg 164 (372)
T 1k8k_C 98 AARCVRWAPNEKKFAVGSGSR-----VISICYFEQENDWWVCKHIKKP--IRSTVLSLDWHPNSVLLAAGSCDF 164 (372)
T ss_dssp CEEEEEECTTSSEEEEEETTS-----SEEEEEEETTTTEEEEEEECTT--CCSCEEEEEECTTSSEEEEEETTS
T ss_pred ceeEEEECCCCCEEEEEeCCC-----EEEEEEecCCCcceeeeeeecc--cCCCeeEEEEcCCCCEEEEEcCCC
Confidence 222333333445677776554 4666666554212222211110 011222223334667777777553
No 98
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=91.47 E-value=12 Score=40.01 Aligned_cols=201 Identities=10% Similarity=0.069 Sum_probs=90.0
Q ss_pred cEEEEECCCCcEEEecCCCCCCCCccceEEEEe-CCEEEEEeccCCCCCccccEEEEEcCCCCCcEEEEEecCCCCCCCc
Q 002047 151 DVHCYDVLTNKWSRITPFGEPPTPRAAHVATAV-GTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGPRY 229 (975)
Q Consensus 151 dv~~yD~~t~~W~~l~~~g~~P~pR~~hsa~~~-~~~iyv~GG~~~~~~~~~dv~~yD~~t~~~~W~~v~~~g~~P~~R~ 229 (975)
.+|.+|..+++++.+........| ..++.. ++++|+.+..+ ....+++||+.+.. ++.+.... .....
T Consensus 19 ~v~~~d~~tg~~~~~~~~~~~~~p---~~~a~spdg~l~~~~~~~----~~~~v~~~~~~~g~--~~~~~~~~--~~~~~ 87 (347)
T 3hfq_A 19 YQGTLDTTAKTLTNDGLLAATQNP---TYLALSAKDCLYSVDKED----DEGGIAAWQIDGQT--AHKLNTVV--APGTP 87 (347)
T ss_dssp EEEEEETTTTEEEEEEEEEECSCC---CCEEECTTCEEEEEEEET----TEEEEEEEEEETTE--EEEEEEEE--EESCC
T ss_pred EEEEEcCCCCeEEEeeeeeccCCc---ceEEEccCCeEEEEEecC----CCceEEEEEecCCc--EEEeeeee--cCCCC
Confidence 478888888888775432111111 122322 45777665421 13579999996653 55544210 00111
Q ss_pred ccEEEEe-CCcEEEEEcCCCCCCCCCcEEEEECC-CCCcEE-EEccCCCCCCCC----cceeEEEEEeCCeEEEecCCCC
Q 002047 230 GHVMALV-GQRYLMAIGGNDGKRPLADVWALDTA-AKPYEW-RKLEPEGEGPPP----CMYATASARSDGLLLLCGGRDA 302 (975)
Q Consensus 230 ~h~~~~~-~~~~lyV~GG~~g~~~~ndv~~yDl~-s~~~~W-~~v~~~~~~P~~----r~~~~a~~~~~g~lyvfGG~~~ 302 (975)
-..+++- +++.||+.+..+ +.+.+||+. ....+. ..+...+..|.+ ...+..+...++++|+.+..+
T Consensus 88 p~~~a~spdg~~l~~~~~~~-----~~v~v~~~~~~g~~~~~~~~~~~~~~p~~~~~~~~~~~~~~spdg~l~v~~~~~- 161 (347)
T 3hfq_A 88 PAYVAVDEARQLVYSANYHK-----GTAEVMKIAADGALTLTDTVQHSGHGPRPEQDGSHIHYTDLTPDNRLAVIDLGS- 161 (347)
T ss_dssp CSEEEEETTTTEEEEEETTT-----TEEEEEEECTTSCEEEEEEEECCCCCSSTTCSSCCEEEEEECTTSCEEEEETTT-
T ss_pred CEEEEECCCCCEEEEEeCCC-----CEEEEEEeCCCCCeeecceeecCCCCCCccccCCCceEEEECCCCcEEEEeCCC-
Confidence 1233333 344677765322 357778774 221122 112222222211 122334444567777764322
Q ss_pred CCCCccceEEeecCCCCeEEEEECCCCCCCCcceeeEEEe-CC-EEEEEcCcCCCCCccccCCcEEEEECCCCeEEEccc
Q 002047 303 SSVPLASAYGLAKHRDGRWEWAIAPGVSPSPRYQHAAVFV-NA-RLHVSGGALGGGRMVEDSSSVAVLDTAAGVWCDTKS 380 (975)
Q Consensus 303 ~~~~l~d~~~~~~~~~~~W~w~~~~g~~P~~R~~hs~v~~-~~-~L~V~GG~~~~~~~~~~~~dv~~yD~~t~~W~~v~~ 380 (975)
+.++.|+...++.......... +....-..+++. ++ .||+.+...+ .-.+|.++..+.++..+..
T Consensus 162 -----~~v~~~~~~~~g~~~~~~~~~~-~~g~~p~~~~~spdg~~l~v~~~~~~-------~v~v~~~~~~~g~~~~~~~ 228 (347)
T 3hfq_A 162 -----DKVYVYNVSDAGQLSEQSVLTM-EAGFGPRHLVFSPDGQYAFLAGELSS-------QIASLKYDTQTGAFTQLGI 228 (347)
T ss_dssp -----TEEEEEEECTTSCEEEEEEEEC-CTTCCEEEEEECTTSSEEEEEETTTT-------EEEEEEEETTTTEEEEEEE
T ss_pred -----CEEEEEEECCCCcEEEeeeEEc-CCCCCCceEEECCCCCEEEEEeCCCC-------EEEEEEecCCCCceEEeee
Confidence 2355555443444433221111 111111123333 44 4777654221 1124455555688766654
Q ss_pred C
Q 002047 381 V 381 (975)
Q Consensus 381 ~ 381 (975)
.
T Consensus 229 ~ 229 (347)
T 3hfq_A 229 V 229 (347)
T ss_dssp E
T ss_pred e
Confidence 4
No 99
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=91.36 E-value=6.5 Score=41.72 Aligned_cols=104 Identities=13% Similarity=0.052 Sum_probs=51.8
Q ss_pred CcEEEEECCCCcEEEecCCCCCCCCccceEEEEe-C-CEEEEEeccCCCCCccccEEEEEcCCCCCcEEEEEecCCCCC-
Q 002047 150 ADVHCYDVLTNKWSRITPFGEPPTPRAAHVATAV-G-TMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPG- 226 (975)
Q Consensus 150 ~dv~~yD~~t~~W~~l~~~g~~P~pR~~hsa~~~-~-~~iyv~GG~~~~~~~~~dv~~yD~~t~~~~W~~v~~~g~~P~- 226 (975)
+.++++|+.+.+....-..+ .....+.++.. + +.+|+.+.. ...+++||+.+.. .......+..+.
T Consensus 21 ~~v~~~d~~~~~~~~~~~~~---~~~~~~~~~~s~dg~~~~v~~~~------~~~i~~~d~~t~~--~~~~~~~~~~~~~ 89 (349)
T 1jmx_B 21 NNLHVVDVASDTVYKSCVMP---DKFGPGTAMMAPDNRTAYVLNNH------YGDIYGIDLDTCK--NTFHANLSSVPGE 89 (349)
T ss_dssp TEEEEEETTTTEEEEEEECS---SCCSSCEEEECTTSSEEEEEETT------TTEEEEEETTTTE--EEEEEESCCSTTE
T ss_pred CeEEEEECCCCcEEEEEecC---CCCCCceeEECCCCCEEEEEeCC------CCcEEEEeCCCCc--EEEEEEccccccc
Confidence 47899999988765443331 10012333333 3 367777642 3579999998763 222211111111
Q ss_pred -CCcccEEEEe-CCcEEEEEcCC---CCCC---CCCcEEEEECCCC
Q 002047 227 -PRYGHVMALV-GQRYLMAIGGN---DGKR---PLADVWALDTAAK 264 (975)
Q Consensus 227 -~R~~h~~~~~-~~~~lyV~GG~---~g~~---~~ndv~~yDl~s~ 264 (975)
...-+.+++- ++++||+.+.. .... ..+.+++||+.+.
T Consensus 90 ~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~i~~~d~~~~ 135 (349)
T 1jmx_B 90 VGRSMYSFAISPDGKEVYATVNPTQRLNDHYVVKPPRLEVFSTADG 135 (349)
T ss_dssp EEECSSCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEEGGGG
T ss_pred ccccccceEECCCCCEEEEEcccccccccccccCCCeEEEEECCCc
Confidence 1112333343 34356655421 0000 1257999999773
No 100
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=91.33 E-value=14 Score=41.23 Aligned_cols=172 Identities=14% Similarity=0.112 Sum_probs=84.0
Q ss_pred cEEEEECCCCcEEEecCCCCCCCCccceEEEEeCCEEEEEeccCCCCCccccEEEEEcCCCCCcEEEEEecCCCCCCCcc
Q 002047 151 DVHCYDVLTNKWSRITPFGEPPTPRAAHVATAVGTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGPRYG 230 (975)
Q Consensus 151 dv~~yD~~t~~W~~l~~~g~~P~pR~~hsa~~~~~~iyv~GG~~~~~~~~~dv~~yD~~t~~~~W~~v~~~g~~P~~R~~ 230 (975)
.+..||+.+.+-...-.. ....-.+++ ..+.+++.|+. ...+.+||+.+.. .-..+. .....
T Consensus 140 ~i~vwd~~~~~~~~~~~~----h~~~v~~~~-~~~~~l~s~~~------dg~i~vwd~~~~~-~~~~~~------~h~~~ 201 (445)
T 2ovr_B 140 TLKVWSAVTGKCLRTLVG----HTGGVWSSQ-MRDNIIISGST------DRTLKVWNAETGE-CIHTLY------GHTST 201 (445)
T ss_dssp CEEEEETTTCCEEEECCC----CSSCEEEEE-EETTEEEEEET------TSCEEEEETTTTE-EEEEEC------CCSSC
T ss_pred cEEEEECCCCcEEEEEcC----CCCCEEEEE-ecCCEEEEEeC------CCeEEEEECCcCc-EEEEEC------CCCCc
Confidence 678899887654332211 111112222 33445666664 3578999998763 111121 11122
Q ss_pred cEEEEeCCcEEEEEcCCCCCCCCCcEEEEECCCCCcEEEEccCCCCCCCCcceeEEEEEeCCeEEEecCCCCCCCCccce
Q 002047 231 HVMALVGQRYLMAIGGNDGKRPLADVWALDTAAKPYEWRKLEPEGEGPPPCMYATASARSDGLLLLCGGRDASSVPLASA 310 (975)
Q Consensus 231 h~~~~~~~~~lyV~GG~~g~~~~ndv~~yDl~s~~~~W~~v~~~~~~P~~r~~~~a~~~~~g~lyvfGG~~~~~~~l~d~ 310 (975)
-.+..+.+ ..++.|+.++ .+..||+.+....+..... . ..-.++.. ++..++.|+.++. +
T Consensus 202 v~~~~~~~-~~l~s~s~dg-----~i~~wd~~~~~~~~~~~~~--~-----~~v~~~~~-~~~~l~~~~~dg~------i 261 (445)
T 2ovr_B 202 VRCMHLHE-KRVVSGSRDA-----TLRVWDIETGQCLHVLMGH--V-----AAVRCVQY-DGRRVVSGAYDFM------V 261 (445)
T ss_dssp EEEEEEET-TEEEEEETTS-----EEEEEESSSCCEEEEEECC--S-----SCEEEEEE-CSSCEEEEETTSC------E
T ss_pred EEEEEecC-CEEEEEeCCC-----EEEEEECCCCcEEEEEcCC--c-----ccEEEEEE-CCCEEEEEcCCCE------E
Confidence 23333444 3566676654 6888999877322322111 1 11122233 6777777775542 3
Q ss_pred EEeecCCCCeEEEEECCCCCCCCcceeeEEEeCCEEEEEcCcCCCCCccccCCcEEEEECCCCeE
Q 002047 311 YGLAKHRDGRWEWAIAPGVSPSPRYQHAAVFVNARLHVSGGALGGGRMVEDSSSVAVLDTAAGVW 375 (975)
Q Consensus 311 ~~~~~~~~~~W~w~~~~g~~P~~R~~hs~v~~~~~L~V~GG~~~~~~~~~~~~dv~~yD~~t~~W 375 (975)
..++.... .-.... .+ .... ..++..++..++.|+.++ .+.+||+.+.+-
T Consensus 262 ~iwd~~~~-~~~~~~-~~---~~~~-v~~~~~~~~~l~~~~~d~---------~i~i~d~~~~~~ 311 (445)
T 2ovr_B 262 KVWDPETE-TCLHTL-QG---HTNR-VYSLQFDGIHVVSGSLDT---------SIRVWDVETGNC 311 (445)
T ss_dssp EEEEGGGT-EEEEEE-CC---CSSC-EEEEEECSSEEEEEETTS---------CEEEEETTTCCE
T ss_pred EEEECCCC-cEeEEe-cC---CCCc-eEEEEECCCEEEEEeCCC---------eEEEEECCCCCE
Confidence 33333322 211111 11 1111 223333777777777533 388999988754
No 101
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=91.06 E-value=13 Score=39.92 Aligned_cols=180 Identities=14% Similarity=0.099 Sum_probs=83.2
Q ss_pred cEEEEECCCCcEEEecCCCCCCCCccceEEEEe-CCEEEEEeccCCCCCccccEEEEEcCCCCCcEEEEEe-cCCCCCCC
Q 002047 151 DVHCYDVLTNKWSRITPFGEPPTPRAAHVATAV-GTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVV-QGPGPGPR 228 (975)
Q Consensus 151 dv~~yD~~t~~W~~l~~~g~~P~pR~~hsa~~~-~~~iyv~GG~~~~~~~~~dv~~yD~~t~~~~W~~v~~-~g~~P~~R 228 (975)
.+.++|..+..-...-.. ....-.+++.. ++.+++.||. ...+.+||+.+.......... .+. ..
T Consensus 78 ~v~iWd~~~~~~~~~~~~----~~~~v~~~~~s~~~~~l~s~~~------d~~v~iw~~~~~~~~~~~~~~~~~h---~~ 144 (340)
T 1got_B 78 KLIIWDSYTTNKVHAIPL----RSSWVMTCAYAPSGNYVACGGL------DNICSIYNLKTREGNVRVSRELAGH---TG 144 (340)
T ss_dssp EEEEEETTTCCEEEEEEC----SSSCEEEEEECTTSSEEEEEET------TCEEEEEETTTCSBSCEEEEEEECC---SS
T ss_pred cEEEEECCCCCcceEeec----CCccEEEEEECCCCCEEEEEeC------CCeEEEEECccCCCcceeEEEecCC---Cc
Confidence 677888776653322111 01111122222 3466677775 356889998765322222221 111 11
Q ss_pred cccEEEEeCCcEEEEEcCCCCCCCCCcEEEEECCCCCcEEEEccCCCCCCCCcceeEEEEEeCCeEEEecCCCCCCCCcc
Q 002047 229 YGHVMALVGQRYLMAIGGNDGKRPLADVWALDTAAKPYEWRKLEPEGEGPPPCMYATASARSDGLLLLCGGRDASSVPLA 308 (975)
Q Consensus 229 ~~h~~~~~~~~~lyV~GG~~g~~~~ndv~~yDl~s~~~~W~~v~~~~~~P~~r~~~~a~~~~~g~lyvfGG~~~~~~~l~ 308 (975)
.-.++....++. ++.|+.++ .+..||+.+. +-...-.... ..........++.+++.|+.++.
T Consensus 145 ~v~~~~~~~~~~-l~s~s~d~-----~i~~wd~~~~--~~~~~~~~h~----~~v~~~~~~~~~~~l~sg~~d~~----- 207 (340)
T 1got_B 145 YLSCCRFLDDNQ-IVTSSGDT-----TCALWDIETG--QQTTTFTGHT----GDVMSLSLAPDTRLFVSGACDAS----- 207 (340)
T ss_dssp CEEEEEEEETTE-EEEEETTS-----CEEEEETTTT--EEEEEECCCS----SCEEEEEECTTSSEEEEEETTSC-----
T ss_pred cEEEEEECCCCc-EEEEECCC-----cEEEEECCCC--cEEEEEcCCC----CceEEEEECCCCCEEEEEeCCCc-----
Confidence 111222233434 55555543 5888999887 4332211111 11222333446778888876543
Q ss_pred ceEEeecCCCCeEEEEECCCCCCCCcceeeEEEe-CCEEEEEcCcCCCCCccccCCcEEEEECCCCeE
Q 002047 309 SAYGLAKHRDGRWEWAIAPGVSPSPRYQHAAVFV-NARLHVSGGALGGGRMVEDSSSVAVLDTAAGVW 375 (975)
Q Consensus 309 d~~~~~~~~~~~W~w~~~~g~~P~~R~~hs~v~~-~~~L~V~GG~~~~~~~~~~~~dv~~yD~~t~~W 375 (975)
+..++.... .-... ..+ ....-.++++. ++.+++.|+.++ .|.+||+.+.+-
T Consensus 208 -v~~wd~~~~-~~~~~-~~~---h~~~v~~v~~~p~~~~l~s~s~d~---------~v~iwd~~~~~~ 260 (340)
T 1got_B 208 -AKLWDVREG-MCRQT-FTG---HESDINAICFFPNGNAFATGSDDA---------TCRLFDLRADQE 260 (340)
T ss_dssp -EEEEETTTC-SEEEE-ECC---CSSCEEEEEECTTSSEEEEEETTS---------CEEEEETTTTEE
T ss_pred -EEEEECCCC-eeEEE-EcC---CcCCEEEEEEcCCCCEEEEEcCCC---------cEEEEECCCCcE
Confidence 222332221 11111 111 11111223333 567778887543 378899988754
No 102
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=90.98 E-value=16 Score=38.05 Aligned_cols=103 Identities=10% Similarity=0.019 Sum_probs=54.0
Q ss_pred CcEEEEECCCCcEEEecCCCCCCCCccceEEEEe-C-CEEEEEeccCCCCCccccEEEEEcCCCCCcEEEE-EecCCCCC
Q 002047 150 ADVHCYDVLTNKWSRITPFGEPPTPRAAHVATAV-G-TMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRV-VVQGPGPG 226 (975)
Q Consensus 150 ~dv~~yD~~t~~W~~l~~~g~~P~pR~~hsa~~~-~-~~iyv~GG~~~~~~~~~dv~~yD~~t~~~~W~~v-~~~g~~P~ 226 (975)
..+++||+.+.++..+...........-++++.. + +.+|+.... +.+++||+. .. ...+ ........
T Consensus 46 ~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~i~~~~~~g~l~v~~~~-------~~l~~~d~~-g~--~~~~~~~~~~~~~ 115 (314)
T 1pjx_A 46 GEILRIDLKTGKKTVICKPEVNGYGGIPAGCQCDRDANQLFVADMR-------LGLLVVQTD-GT--FEEIAKKDSEGRR 115 (314)
T ss_dssp CEEEEECTTTCCEEEEECCEETTEECCEEEEEECSSSSEEEEEETT-------TEEEEEETT-SC--EEECCSBCTTSCB
T ss_pred CEEEEEeCCCCcEEEEEecccCCCCCCCceEEEecCCCcEEEEECC-------CCEEEEeCC-CC--EEEEEeccCCCcc
Confidence 4689999988888776431000011122344443 3 578887541 368999987 43 5444 21111011
Q ss_pred CCcccEEEEeCCcEEEEEcCCCC----------CCCCCcEEEEECC
Q 002047 227 PRYGHVMALVGQRYLMAIGGNDG----------KRPLADVWALDTA 262 (975)
Q Consensus 227 ~R~~h~~~~~~~~~lyV~GG~~g----------~~~~ndv~~yDl~ 262 (975)
...-+.++.-.++.+|+....++ ......+++||+.
T Consensus 116 ~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 161 (314)
T 1pjx_A 116 MQGCNDCAFDYEGNLWITAPAGEVAPADYTRSMQEKFGSIYCFTTD 161 (314)
T ss_dssp CBCCCEEEECTTSCEEEEECBCBCTTSCCCBTTSSSCEEEEEECTT
T ss_pred ccCCcCEEECCCCCEEEEecCcccccccccccccCCCCeEEEECCC
Confidence 11233444444557888654321 1123579999987
No 103
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=90.94 E-value=17 Score=38.00 Aligned_cols=180 Identities=13% Similarity=0.114 Sum_probs=84.1
Q ss_pred CcEEEEECCCCcEEEecCCCCCCCCccceEEEEe-CCEEEEEeccCCCCCccccEEEEEcCCCCCcEEEEEecCCCCCCC
Q 002047 150 ADVHCYDVLTNKWSRITPFGEPPTPRAAHVATAV-GTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGPR 228 (975)
Q Consensus 150 ~dv~~yD~~t~~W~~l~~~g~~P~pR~~hsa~~~-~~~iyv~GG~~~~~~~~~dv~~yD~~t~~~~W~~v~~~g~~P~~R 228 (975)
..+..||+.+.+-...-.. .... -.+++.. ++.+++.|+. ...+.+||+.+.. .-..+ +...
T Consensus 87 ~~i~vwd~~~~~~~~~~~~---~~~~-v~~~~~~~~~~~l~s~~~------d~~i~iwd~~~~~-~~~~~------~~~~ 149 (312)
T 4ery_A 87 KTLKIWDVSSGKCLKTLKG---HSNY-VFCCNFNPQSNLIVSGSF------DESVRIWDVKTGK-CLKTL------PAHS 149 (312)
T ss_dssp SEEEEEETTTCCEEEEEEC---CSSC-EEEEEECSSSSEEEEEET------TSCEEEEETTTCC-EEEEE------CCCS
T ss_pred CEEEEEECCCCcEEEEEcC---CCCC-EEEEEEcCCCCEEEEEeC------CCcEEEEECCCCE-EEEEe------cCCC
Confidence 3678889887653322111 0111 1112222 3456666664 3468999998753 11122 1111
Q ss_pred cccE-EEEeCCcEEEEEcCCCCCCCCCcEEEEECCCCCcEEEEccCCCCCCCCcceeEEEEEeCCeEEEecCCCCCCCCc
Q 002047 229 YGHV-MALVGQRYLMAIGGNDGKRPLADVWALDTAAKPYEWRKLEPEGEGPPPCMYATASARSDGLLLLCGGRDASSVPL 307 (975)
Q Consensus 229 ~~h~-~~~~~~~~lyV~GG~~g~~~~ndv~~yDl~s~~~~W~~v~~~~~~P~~r~~~~a~~~~~g~lyvfGG~~~~~~~l 307 (975)
..-. ++...++.+++.|+.++ .+..||+.+. +....-..... ..........++..++.|+.++
T Consensus 150 ~~v~~~~~~~~~~~l~~~~~d~-----~i~~wd~~~~--~~~~~~~~~~~---~~~~~~~~~~~~~~l~~~~~d~----- 214 (312)
T 4ery_A 150 DPVSAVHFNRDGSLIVSSSYDG-----LCRIWDTASG--QCLKTLIDDDN---PPVSFVKFSPNGKYILAATLDN----- 214 (312)
T ss_dssp SCEEEEEECTTSSEEEEEETTS-----CEEEEETTTC--CEEEEECCSSC---CCEEEEEECTTSSEEEEEETTT-----
T ss_pred CcEEEEEEcCCCCEEEEEeCCC-----cEEEEECCCC--ceeeEEeccCC---CceEEEEECCCCCEEEEEcCCC-----
Confidence 1122 22333445777777664 5888999876 33221111110 1122223334666777776543
Q ss_pred cceEEeecCCCCeEEEEECCCCCCCCccee--eEEEeCCEEEEEcCcCCCCCccccCCcEEEEECCCCe
Q 002047 308 ASAYGLAKHRDGRWEWAIAPGVSPSPRYQH--AAVFVNARLHVSGGALGGGRMVEDSSSVAVLDTAAGV 374 (975)
Q Consensus 308 ~d~~~~~~~~~~~W~w~~~~g~~P~~R~~h--s~v~~~~~L~V~GG~~~~~~~~~~~~dv~~yD~~t~~ 374 (975)
.+..++.... .-.... .+.. ...... .....++.+++.|+.++ .|.+||+.+.+
T Consensus 215 -~i~iwd~~~~-~~~~~~-~~~~-~~~~~~~~~~~~~~~~~l~sg~~dg---------~i~vwd~~~~~ 270 (312)
T 4ery_A 215 -TLKLWDYSKG-KCLKTY-TGHK-NEKYCIFANFSVTGGKWIVSGSEDN---------LVYIWNLQTKE 270 (312)
T ss_dssp -EEEEEETTTT-EEEEEE-CSSC-CSSSCCCEEEECSSSCEEEECCTTS---------CEEEEETTTCC
T ss_pred -eEEEEECCCC-cEEEEE-EecC-CceEEEEEEEEeCCCcEEEEECCCC---------EEEEEECCCch
Confidence 2333333322 211111 1111 111111 11223567778887543 38889998875
No 104
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=90.51 E-value=20 Score=38.13 Aligned_cols=180 Identities=14% Similarity=0.140 Sum_probs=88.5
Q ss_pred CcEEEEECCCCcEEEecCCCCCCCCccceEEEEe-CCEEEEEeccCCCCCccccEEEEEcCCCCCcEEEEEecCCCCCCC
Q 002047 150 ADVHCYDVLTNKWSRITPFGEPPTPRAAHVATAV-GTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGPR 228 (975)
Q Consensus 150 ~dv~~yD~~t~~W~~l~~~g~~P~pR~~hsa~~~-~~~iyv~GG~~~~~~~~~dv~~yD~~t~~~~W~~v~~~g~~P~~R 228 (975)
..+..+|+.+.+-...-... +.. ..+++.. ++..++.|+. ...+.+||+.+....+. +. ....
T Consensus 102 ~~i~lWd~~~~~~~~~~~~~--~~~--~~~~~~spdg~~l~~g~~------dg~v~i~~~~~~~~~~~-~~-----~~~~ 165 (321)
T 3ow8_A 102 AHIRLWDLENGKQIKSIDAG--PVD--AWTLAFSPDSQYLATGTH------VGKVNIFGVESGKKEYS-LD-----TRGK 165 (321)
T ss_dssp SEEEEEETTTTEEEEEEECC--TTC--CCCEEECTTSSEEEEECT------TSEEEEEETTTCSEEEE-EE-----CSSS
T ss_pred CcEEEEECCCCCEEEEEeCC--Ccc--EEEEEECCCCCEEEEEcC------CCcEEEEEcCCCceeEE-ec-----CCCc
Confidence 46788898877643332211 111 1122222 4466666664 35688999987642222 22 1111
Q ss_pred cccEEEEeCCcEEEEEcCCCCCCCCCcEEEEECCCCCcEEEEccCCCCCCCCcceeEEEEEeCCeEEEecCCCCCCCCcc
Q 002047 229 YGHVMALVGQRYLMAIGGNDGKRPLADVWALDTAAKPYEWRKLEPEGEGPPPCMYATASARSDGLLLLCGGRDASSVPLA 308 (975)
Q Consensus 229 ~~h~~~~~~~~~lyV~GG~~g~~~~ndv~~yDl~s~~~~W~~v~~~~~~P~~r~~~~a~~~~~g~lyvfGG~~~~~~~l~ 308 (975)
.-.+++...++.+++.|+.++ .+..||+.+. +-...-..... .....+...++.+++.|+.++.
T Consensus 166 ~v~~~~~spdg~~lasg~~dg-----~i~iwd~~~~--~~~~~~~~h~~----~v~~l~~spd~~~l~s~s~dg~----- 229 (321)
T 3ow8_A 166 FILSIAYSPDGKYLASGAIDG-----IINIFDIATG--KLLHTLEGHAM----PIRSLTFSPDSQLLVTASDDGY----- 229 (321)
T ss_dssp CEEEEEECTTSSEEEEEETTS-----CEEEEETTTT--EEEEEECCCSS----CCCEEEECTTSCEEEEECTTSC-----
T ss_pred eEEEEEECCCCCEEEEEcCCC-----eEEEEECCCC--cEEEEEcccCC----ceeEEEEcCCCCEEEEEcCCCe-----
Confidence 222333334446777777664 5889999887 43222111111 1122233446778888876543
Q ss_pred ceEEeecCCCCeEEEEECCCCCCCCcceeeEEEe-CCEEEEEcCcCCCCCccccCCcEEEEECCCCeEE
Q 002047 309 SAYGLAKHRDGRWEWAIAPGVSPSPRYQHAAVFV-NARLHVSGGALGGGRMVEDSSSVAVLDTAAGVWC 376 (975)
Q Consensus 309 d~~~~~~~~~~~W~w~~~~g~~P~~R~~hs~v~~-~~~L~V~GG~~~~~~~~~~~~dv~~yD~~t~~W~ 376 (975)
+..++.... .... ...+ ....-.++++. ++.+++.|+.++ .|.++|+.+.+-.
T Consensus 230 -i~iwd~~~~-~~~~-~~~~---h~~~v~~~~~sp~~~~l~s~s~D~---------~v~iwd~~~~~~~ 283 (321)
T 3ow8_A 230 -IKIYDVQHA-NLAG-TLSG---HASWVLNVAFCPDDTHFVSSSSDK---------SVKVWDVGTRTCV 283 (321)
T ss_dssp -EEEEETTTC-CEEE-EECC---CSSCEEEEEECTTSSEEEEEETTS---------CEEEEETTTTEEE
T ss_pred -EEEEECCCc-ceeE-EEcC---CCCceEEEEECCCCCEEEEEeCCC---------cEEEEeCCCCEEE
Confidence 233333222 1111 1111 11111223333 566777777543 3888999887643
No 105
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=90.18 E-value=18 Score=37.65 Aligned_cols=150 Identities=15% Similarity=0.060 Sum_probs=73.0
Q ss_pred CCEEEEEeccCCCCCccccEEEEEcCCCCCcEEEEEecCCCCCCCc-ccEEEEeCCcEEEEEcCCCCCCCCCcEEEEECC
Q 002047 184 GTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGPRY-GHVMALVGQRYLMAIGGNDGKRPLADVWALDTA 262 (975)
Q Consensus 184 ~~~iyv~GG~~~~~~~~~dv~~yD~~t~~~~W~~v~~~g~~P~~R~-~h~~~~~~~~~lyV~GG~~g~~~~ndv~~yDl~ 262 (975)
++..++.|+. ...+.+||+.+.. +...... ..... -.+++...++.+++.|+.++ .+..||+.
T Consensus 108 ~~~~l~~~~~------d~~i~~~d~~~~~--~~~~~~~---~~~~~~i~~~~~~~~~~~l~~~~~dg-----~v~~~d~~ 171 (337)
T 1gxr_A 108 DGCTLIVGGE------ASTLSIWDLAAPT--PRIKAEL---TSSAPACYALAISPDSKVCFSCCSDG-----NIAVWDLH 171 (337)
T ss_dssp TSSEEEEEES------SSEEEEEECCCC----EEEEEE---ECSSSCEEEEEECTTSSEEEEEETTS-----CEEEEETT
T ss_pred CCCEEEEEcC------CCcEEEEECCCCC--cceeeec---ccCCCceEEEEECCCCCEEEEEeCCC-----cEEEEeCC
Confidence 3456666654 3579999998763 3222211 11111 12333333445667776654 58899998
Q ss_pred CCCcEEEEccCCCCCCCCcceeEEEEEeCCeEEEecCCCCCCCCccceEEeecCCCCeEEEEECCCCCCCCcceeeEEEe
Q 002047 263 AKPYEWRKLEPEGEGPPPCMYATASARSDGLLLLCGGRDASSVPLASAYGLAKHRDGRWEWAIAPGVSPSPRYQHAAVFV 342 (975)
Q Consensus 263 s~~~~W~~v~~~~~~P~~r~~~~a~~~~~g~lyvfGG~~~~~~~l~d~~~~~~~~~~~W~w~~~~g~~P~~R~~hs~v~~ 342 (975)
+. +....-.... ..........++..++.|+.++ .+..++.... .-..... ....-.++++.
T Consensus 172 ~~--~~~~~~~~~~----~~i~~~~~~~~~~~l~~~~~dg------~i~~~d~~~~-~~~~~~~-----~~~~v~~~~~s 233 (337)
T 1gxr_A 172 NQ--TLVRQFQGHT----DGASCIDISNDGTKLWTGGLDN------TVRSWDLREG-RQLQQHD-----FTSQIFSLGYC 233 (337)
T ss_dssp TT--EEEEEECCCS----SCEEEEEECTTSSEEEEEETTS------EEEEEETTTT-EEEEEEE-----CSSCEEEEEEC
T ss_pred CC--ceeeeeeccc----CceEEEEECCCCCEEEEEecCC------cEEEEECCCC-ceEeeec-----CCCceEEEEEC
Confidence 87 4433221111 1222223334666777776543 2444444333 2111111 11112233332
Q ss_pred -CCEEEEEcCcCCCCCccccCCcEEEEECCCCeEE
Q 002047 343 -NARLHVSGGALGGGRMVEDSSSVAVLDTAAGVWC 376 (975)
Q Consensus 343 -~~~L~V~GG~~~~~~~~~~~~dv~~yD~~t~~W~ 376 (975)
++.++++|+.+ ..+.+||+.+.+-.
T Consensus 234 ~~~~~l~~~~~~---------~~i~~~~~~~~~~~ 259 (337)
T 1gxr_A 234 PTGEWLAVGMES---------SNVEVLHVNKPDKY 259 (337)
T ss_dssp TTSSEEEEEETT---------SCEEEEETTSSCEE
T ss_pred CCCCEEEEEcCC---------CcEEEEECCCCCeE
Confidence 55677777643 34889999887543
No 106
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=89.86 E-value=5.1 Score=48.86 Aligned_cols=96 Identities=9% Similarity=0.122 Sum_probs=53.2
Q ss_pred cEEEEECCCCcEEEecCCCCCCCCccceEEEEe-C--CEEEEEeccCCCCCccccEEEEEcCCCCCcEEEEEecCCCCCC
Q 002047 151 DVHCYDVLTNKWSRITPFGEPPTPRAAHVATAV-G--TMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGP 227 (975)
Q Consensus 151 dv~~yD~~t~~W~~l~~~g~~P~pR~~hsa~~~-~--~~iyv~GG~~~~~~~~~dv~~yD~~t~~~~W~~v~~~g~~P~~ 227 (975)
.+.+||+....+..+.... .....-.+++.. + +.+++.|+. ...+.+||+.+. +|..+... ...
T Consensus 32 ~I~vwd~~~~~~~~~~~l~--~h~~~V~~l~~s~~~~~~~l~s~s~------Dg~I~vwd~~~~--~~~~~~~~---~~h 98 (753)
T 3jro_A 32 TIKIFEVEGETHKLIDTLT--GHEGPVWRVDWAHPKFGTILASCSY------DGKVLIWKEENG--RWSQIAVH---AVH 98 (753)
T ss_dssp EEEEEEEETTEEEEEEEEC--CCSSCEEEEEECCTTSCSEEEEEET------TSCEEEEEEETT--EEEEEEEE---CCC
T ss_pred cEEEEecCCCCCccceecc--CCcCceEEEEecCCCCCCEEEEEeC------CCeEEEEECCCC--cccccccc---cCC
Confidence 6788888877777665431 111111222222 2 566677764 356899998876 36665522 222
Q ss_pred CcccEEEEe-CC--cEEEEEcCCCCCCCCCcEEEEECCCC
Q 002047 228 RYGHVMALV-GQ--RYLMAIGGNDGKRPLADVWALDTAAK 264 (975)
Q Consensus 228 R~~h~~~~~-~~--~~lyV~GG~~g~~~~ndv~~yDl~s~ 264 (975)
...-..+.+ .+ +.+++.|+.++ .+..||+.+.
T Consensus 99 ~~~V~~v~~sp~~~~~~l~sgs~dg-----~I~vwdl~~~ 133 (753)
T 3jro_A 99 SASVNSVQWAPHEYGPLLLVASSDG-----KVSVVEFKEN 133 (753)
T ss_dssp SSCEEEEEECCGGGCSEEEEEETTS-----EEEEEECCSS
T ss_pred CCCeEEEEECCCCCCCEEEEEeCCC-----cEEEEEeecC
Confidence 222233333 22 35777777664 6788888665
No 107
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=89.49 E-value=18 Score=39.03 Aligned_cols=52 Identities=10% Similarity=-0.031 Sum_probs=29.8
Q ss_pred CcEEEEECCCCcEEEecCCCCCCCCccce-EEEEeCC-EEEEEeccCCCCCccccEEEEEcCCCC
Q 002047 150 ADVHCYDVLTNKWSRITPFGEPPTPRAAH-VATAVGT-MVVIQGGIGPAGLSAEDLHVLDLTQQR 212 (975)
Q Consensus 150 ~dv~~yD~~t~~W~~l~~~g~~P~pR~~h-sa~~~~~-~iyv~GG~~~~~~~~~dv~~yD~~t~~ 212 (975)
..+|.+|+.+.....+.... .+... ....-++ .|++.... ..++++|+.+..
T Consensus 60 ~~l~~~d~~~~~~~~l~~~~----~~~~~~~~~spdg~~l~~~~~~-------~~l~~~d~~~~~ 113 (396)
T 3c5m_A 60 RNYYLLNLETQQAVQLTEGK----GDNTFGGFISTDERAFFYVKNE-------LNLMKVDLETLE 113 (396)
T ss_dssp CEEEEEETTTTEEEECCCSS----CBCTTTCEECTTSSEEEEEETT-------TEEEEEETTTCC
T ss_pred ceEEEEECCCCcEEEeecCC----CCccccceECCCCCEEEEEEcC-------CcEEEEECCCCC
Confidence 36899999998887775431 12122 2222234 44444321 269999988753
No 108
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=89.21 E-value=5.3 Score=43.58 Aligned_cols=151 Identities=13% Similarity=0.053 Sum_probs=70.2
Q ss_pred CCEEEEEeccCCCCCccccEEEEEcCCCCCcEEEEEecCCCCCCCcccEEEEe--CCcEEEEEcCCCCCCCCCcEEEEEC
Q 002047 184 GTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGPRYGHVMALV--GQRYLMAIGGNDGKRPLADVWALDT 261 (975)
Q Consensus 184 ~~~iyv~GG~~~~~~~~~dv~~yD~~t~~~~W~~v~~~g~~P~~R~~h~~~~~--~~~~lyV~GG~~g~~~~ndv~~yDl 261 (975)
+++.++.|+. ...+.+||+.+.. .+.. +......-..+.+ .+..+++.|+.++ .|..||+
T Consensus 138 dg~~l~sgs~------d~~i~iwd~~~~~----~~~~---~~~h~~~V~~~~~~~~~~~~l~s~s~D~-----~v~iwd~ 199 (344)
T 4gqb_B 138 SGTQAVSGSK------DICIKVWDLAQQV----VLSS---YRAHAAQVTCVAASPHKDSVFLSCSEDN-----RILLWDT 199 (344)
T ss_dssp TSSEEEEEET------TSCEEEEETTTTE----EEEE---ECCCSSCEEEEEECSSCTTEEEEEETTS-----CEEEEET
T ss_pred CCCEEEEEeC------CCeEEEEECCCCc----EEEE---EcCcCCceEEEEecCCCCCceeeecccc-----ccccccc
Confidence 4566777764 3468999998753 2221 1111111122222 2335777777764 5788999
Q ss_pred CCCCcEEEEccCCCCCCCCcceeEEEEE--eCCeEEEecCCCCCCCCccceEEeecCCCCeEEEEECCCCCCCCcceeeE
Q 002047 262 AAKPYEWRKLEPEGEGPPPCMYATASAR--SDGLLLLCGGRDASSVPLASAYGLAKHRDGRWEWAIAPGVSPSPRYQHAA 339 (975)
Q Consensus 262 ~s~~~~W~~v~~~~~~P~~r~~~~a~~~--~~g~lyvfGG~~~~~~~l~d~~~~~~~~~~~W~w~~~~g~~P~~R~~hs~ 339 (975)
.+.. .-..+..... .....++.. .++++++.|+.++. +..++........-.. + ....-.++
T Consensus 200 ~~~~-~~~~~~~~~~----~~~~~~~~~~p~~~~~l~sg~~dg~------v~~wd~~~~~~~~~~~--~---h~~~v~~v 263 (344)
T 4gqb_B 200 RCPK-PASQIGCSAP----GYLPTSLAWHPQQSEVFVFGDENGT------VSLVDTKSTSCVLSSA--V---HSQCVTGL 263 (344)
T ss_dssp TSSS-CEEECC--------CCCEEEEEECSSCTTEEEEEETTSE------EEEEESCC--CCEEEE--C---CSSCEEEE
T ss_pred cccc-eeeeeeccee----eccceeeeecCCCCcceEEeccCCc------EEEEECCCCcEEEEEc--C---CCCCEEEE
Confidence 8762 1122211111 011122222 35678888876542 2233322211001011 1 11112233
Q ss_pred EEe-C-CEEEEEcCcCCCCCccccCCcEEEEECCCCeEEE
Q 002047 340 VFV-N-ARLHVSGGALGGGRMVEDSSSVAVLDTAAGVWCD 377 (975)
Q Consensus 340 v~~-~-~~L~V~GG~~~~~~~~~~~~dv~~yD~~t~~W~~ 377 (975)
++. + .++++.|+.++ .|.+||..+.+-..
T Consensus 264 ~fsp~g~~~lasgs~D~---------~i~vwd~~~~~~~~ 294 (344)
T 4gqb_B 264 VFSPHSVPFLASLSEDC---------SLAVLDSSLSELFR 294 (344)
T ss_dssp EECSSSSCCEEEEETTS---------CEEEECTTCCEEEE
T ss_pred EEccCCCeEEEEEeCCC---------eEEEEECCCCcEEE
Confidence 333 2 35777777543 37889998886443
No 109
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=88.74 E-value=26 Score=36.79 Aligned_cols=189 Identities=12% Similarity=0.040 Sum_probs=89.3
Q ss_pred CcEEEEECCCCcEEEecCCCCCCCCccceEEEEe-CCEEEEEeccCCCCCccccEEEEEcCCCCCcEEEEEecCC-CCCC
Q 002047 150 ADVHCYDVLTNKWSRITPFGEPPTPRAAHVATAV-GTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGP-GPGP 227 (975)
Q Consensus 150 ~dv~~yD~~t~~W~~l~~~g~~P~pR~~hsa~~~-~~~iyv~GG~~~~~~~~~dv~~yD~~t~~~~W~~v~~~g~-~P~~ 227 (975)
..+++||+.+.....+... .+ -.+++.. ++++|+.. .+.+++||+.+.. ++.+..... .+..
T Consensus 35 ~~i~~~d~~~~~~~~~~~~-----~~-~~~i~~~~dG~l~v~~--------~~~l~~~d~~~g~--~~~~~~~~~~~~~~ 98 (297)
T 3g4e_A 35 KKVCRWDSFTKQVQRVTMD-----AP-VSSVALRQSGGYVATI--------GTKFCALNWKEQS--AVVLATVDNDKKNN 98 (297)
T ss_dssp TEEEEEETTTCCEEEEECS-----SC-EEEEEEBTTSSEEEEE--------TTEEEEEETTTTE--EEEEEECCTTCSSE
T ss_pred CEEEEEECCCCcEEEEeCC-----Cc-eEEEEECCCCCEEEEE--------CCeEEEEECCCCc--EEEEEecCCCCCCC
Confidence 4789999998876554321 11 1233333 34665542 1468999998763 666543211 1222
Q ss_pred CcccEEEEeCCcEEEEEcCCCC------CCCCCcEEEEECCCCCcEEEEccCCCCCCCCcceeEEEEEeC-CeEEEecCC
Q 002047 228 RYGHVMALVGQRYLMAIGGNDG------KRPLADVWALDTAAKPYEWRKLEPEGEGPPPCMYATASARSD-GLLLLCGGR 300 (975)
Q Consensus 228 R~~h~~~~~~~~~lyV~GG~~g------~~~~ndv~~yDl~s~~~~W~~v~~~~~~P~~r~~~~a~~~~~-g~lyvfGG~ 300 (975)
|.. .+++-.++.+|+..-... ......+|++|+... ...+..... .-...+...+ +.||+....
T Consensus 99 ~~~-di~~d~dG~l~~~~~~~~~~~~~~~~~~~~l~~~d~~g~---~~~~~~~~~-----~pngi~~spdg~~lyv~~~~ 169 (297)
T 3g4e_A 99 RFN-DGKVDPAGRYFAGTMAEETAPAVLERHQGALYSLFPDHH---VKKYFDQVD-----ISNGLDWSLDHKIFYYIDSL 169 (297)
T ss_dssp EEE-EEEECTTSCEEEEEEECCSBTTBCCTTCEEEEEECTTSC---EEEEEEEES-----BEEEEEECTTSCEEEEEEGG
T ss_pred CCC-CEEECCCCCEEEecCCcccccccccCCCcEEEEEECCCC---EEEEeeccc-----cccceEEcCCCCEEEEecCC
Confidence 222 233333446776421111 122457899988532 332221111 1112222223 457776432
Q ss_pred CCCCCCccceEEeecC-CCCeEE----EEECCCCCCCCcceeeEEEe-CCEEEEEcCcCCCCCccccCCcEEEEECCCCe
Q 002047 301 DASSVPLASAYGLAKH-RDGRWE----WAIAPGVSPSPRYQHAAVFV-NARLHVSGGALGGGRMVEDSSSVAVLDTAAGV 374 (975)
Q Consensus 301 ~~~~~~l~d~~~~~~~-~~~~W~----w~~~~g~~P~~R~~hs~v~~-~~~L~V~GG~~~~~~~~~~~~dv~~yD~~t~~ 374 (975)
...++.|+.. .++... +..... ....-.++++- ++.|||..-. ...|++||+++.+
T Consensus 170 ------~~~i~~~~~d~~~G~~~~~~~~~~~~~---~~~~p~g~~~d~~G~lwva~~~---------~~~v~~~d~~tG~ 231 (297)
T 3g4e_A 170 ------SYSVDAFDYDLQTGQISNRRSVYKLEK---EEQIPDGMCIDAEGKLWVACYN---------GGRVIRLDPVTGK 231 (297)
T ss_dssp ------GTEEEEEEECTTTCCEEEEEEEEECCG---GGCEEEEEEEBTTSCEEEEEET---------TTEEEEECTTTCC
T ss_pred ------CCcEEEEeccCCCCcccCcEEEEECCC---CCCCCCeeEECCCCCEEEEEcC---------CCEEEEEcCCCce
Confidence 2345666532 343332 122211 11111233332 5688876421 2349999999877
Q ss_pred EEEcccC
Q 002047 375 WCDTKSV 381 (975)
Q Consensus 375 W~~v~~~ 381 (975)
....-..
T Consensus 232 ~~~~i~~ 238 (297)
T 3g4e_A 232 RLQTVKL 238 (297)
T ss_dssp EEEEEEC
T ss_pred EEEEEEC
Confidence 6544333
No 110
>4d9s_A UVB-resistance protein UVR8; UV resistance, UV-B photoreceptor, tryptophan chromophores, homodimer, COP1, chromatin-binding protein; 1.70A {Arabidopsis thaliana} PDB: 4dnw_A 4dnu_A 4dnv_A
Probab=88.61 E-value=23 Score=39.61 Aligned_cols=63 Identities=17% Similarity=0.055 Sum_probs=34.8
Q ss_pred cccEEEEeCCcEEEEEcCCCC----CCCCCcEEEEE----CCCCCcEEEEccCCCCCCCCcceeEEEEEeCCeEEEecCC
Q 002047 229 YGHVMALVGQRYLMAIGGNDG----KRPLADVWALD----TAAKPYEWRKLEPEGEGPPPCMYATASARSDGLLLLCGGR 300 (975)
Q Consensus 229 ~~h~~~~~~~~~lyV~GG~~g----~~~~ndv~~yD----l~s~~~~W~~v~~~~~~P~~r~~~~a~~~~~g~lyvfGG~ 300 (975)
..|++++..++.+|.+|-... .....+...-. +... +...+.. ...|+.+...++.+|.+|-.
T Consensus 182 ~~hs~alt~~G~v~~wG~n~~GqlG~g~~~~~~~p~~v~~~~~~--~i~~va~-------G~~ht~~l~~~G~v~~wG~n 252 (406)
T 4d9s_A 182 AEHTAAVTEDGDLYGWGWGRYGNLGLGDRTDRLVPERVTSTGGE--KMSMVAC-------GWRHTISVSYSGALYTYGWS 252 (406)
T ss_dssp SSEEEEEETTSCEEEEECCTTSTTCSSSSCCEEEEEECCCSTTC--CEEEEEE-------CSSEEEEEETTCCEEEEECC
T ss_pred CCeEEEEeCCCCEEEeeCCCCCCCCCCCCCCcCccEEecccCCc--eEEEEEE-------CCCcEEEEcCCCCEEEeeCC
Confidence 468888888779999995421 11111111110 0001 2222221 24577777889999999853
No 111
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=88.54 E-value=29 Score=41.32 Aligned_cols=114 Identities=11% Similarity=-0.018 Sum_probs=55.6
Q ss_pred CCcEEEEECCCCCcEEEEccCCCCCCCCcceeEEEEEeCCeEEEecCCCCCCCCccceEEeecCCCCeEEEEECCCCCCC
Q 002047 253 LADVWALDTAAKPYEWRKLEPEGEGPPPCMYATASARSDGLLLLCGGRDASSVPLASAYGLAKHRDGRWEWAIAPGVSPS 332 (975)
Q Consensus 253 ~ndv~~yDl~s~~~~W~~v~~~~~~P~~r~~~~a~~~~~g~lyvfGG~~~~~~~l~d~~~~~~~~~~~W~w~~~~g~~P~ 332 (975)
...++++|+.+. +-..+..... ............+++.++++..+... ....++.++..+...+........ +.
T Consensus 234 ~~~l~~~d~~~~--~~~~~~~~~~--~~~~~~~~~~spdg~~l~~~~~~~~~-~~~~v~~~d~~~g~~~~~~~~~~~-~~ 307 (706)
T 2z3z_A 234 HVTVGIYHLATG--KTVYLQTGEP--KEKFLTNLSWSPDENILYVAEVNRAQ-NECKVNAYDAETGRFVRTLFVETD-KH 307 (706)
T ss_dssp EEEEEEEETTTT--EEEECCCCSC--TTCEEEEEEECTTSSEEEEEEECTTS-CEEEEEEEETTTCCEEEEEEEEEC-SS
T ss_pred eeEEEEEECCCC--ceEeeccCCC--CceeEeeEEEECCCCEEEEEEeCCCC-CeeEEEEEECCCCceeeEEEEccC-CC
Confidence 357999999988 6555542211 11122233334566655554443322 234566665543313332221111 00
Q ss_pred Cc-ceeeEEEe---CCEEEEEcCcCCCCCccccCCcEEEEECCCCeEEEcc
Q 002047 333 PR-YQHAAVFV---NARLHVSGGALGGGRMVEDSSSVAVLDTAAGVWCDTK 379 (975)
Q Consensus 333 ~R-~~hs~v~~---~~~L~V~GG~~~~~~~~~~~~dv~~yD~~t~~W~~v~ 379 (975)
.. ....+++. ++++++.+..++ ...+|.+|........+.
T Consensus 308 ~~~~~~~~~~sp~~dg~~l~~~~~~g-------~~~l~~~~~~~~~~~~l~ 351 (706)
T 2z3z_A 308 YVEPLHPLTFLPGSNNQFIWQSRRDG-------WNHLYLYDTTGRLIRQVT 351 (706)
T ss_dssp CCCCCSCCEECTTCSSEEEEEECTTS-------SCEEEEEETTSCEEEECC
T ss_pred eECccCCceeecCCCCEEEEEEccCC-------ccEEEEEECCCCEEEecC
Confidence 00 01122332 677666665432 356999998777776664
No 112
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=88.49 E-value=11 Score=42.07 Aligned_cols=63 Identities=13% Similarity=0.202 Sum_probs=37.8
Q ss_pred eCCEEEEEeccCCCCCccccEEEEEcCCCCCcEEEEEecCCCCCCCcccEEEEeCCcEEEEEcCCCCCCCCCcEEEEECC
Q 002047 183 VGTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGPRYGHVMALVGQRYLMAIGGNDGKRPLADVWALDTA 262 (975)
Q Consensus 183 ~~~~iyv~GG~~~~~~~~~dv~~yD~~t~~~~W~~v~~~g~~P~~R~~h~~~~~~~~~lyV~GG~~g~~~~ndv~~yDl~ 262 (975)
.++..++.|+. ...+.+||+.+.. -...- ......-.+..+++ .+++.|+.++ .+.+||+.
T Consensus 141 ~d~~~l~~g~~------dg~i~iwd~~~~~--~~~~~-----~~h~~~v~~l~~~~-~~l~sg~~dg-----~i~vwd~~ 201 (435)
T 1p22_A 141 YDDQKIVSGLR------DNTIKIWDKNTLE--CKRIL-----TGHTGSVLCLQYDE-RVIITGSSDS-----TVRVWDVN 201 (435)
T ss_dssp CCSSEEEEEES------SSCEEEEESSSCC--EEEEE-----CCCSSCEEEEECCS-SEEEEEETTS-----CEEEEESS
T ss_pred ECCCEEEEEeC------CCeEEEEeCCCCe--EEEEE-----cCCCCcEEEEEECC-CEEEEEcCCC-----eEEEEECC
Confidence 35566667764 3579999988754 22111 11222233444555 6777787765 68889998
Q ss_pred CC
Q 002047 263 AK 264 (975)
Q Consensus 263 s~ 264 (975)
+.
T Consensus 202 ~~ 203 (435)
T 1p22_A 202 TG 203 (435)
T ss_dssp SC
T ss_pred CC
Confidence 77
No 113
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=88.48 E-value=24 Score=37.28 Aligned_cols=192 Identities=8% Similarity=-0.007 Sum_probs=86.2
Q ss_pred cEEEEECCCCcEEEecCCCCCCCCccceEEEEe-CCEEEEEeccCCCCCccccEEEEEcCCCCCcEEEEEecCCCCCCCc
Q 002047 151 DVHCYDVLTNKWSRITPFGEPPTPRAAHVATAV-GTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGPRY 229 (975)
Q Consensus 151 dv~~yD~~t~~W~~l~~~g~~P~pR~~hsa~~~-~~~iyv~GG~~~~~~~~~dv~~yD~~t~~~~W~~v~~~g~~P~~R~ 229 (975)
.+.+||+.+..-...-.. ....-.+++.. ++..++.|+. ...+.+||+.+.. ...... ....
T Consensus 55 ~i~vwd~~~~~~~~~~~~----h~~~v~~~~~~~~~~~l~s~~~------dg~i~iwd~~~~~--~~~~~~-----~~~~ 117 (369)
T 3zwl_B 55 SASVWYSLNGERLGTLDG----HTGTIWSIDVDCFTKYCVTGSA------DYSIKLWDVSNGQ--CVATWK-----SPVP 117 (369)
T ss_dssp CEEEEETTTCCEEEEECC----CSSCEEEEEECTTSSEEEEEET------TTEEEEEETTTCC--EEEEEE-----CSSC
T ss_pred EEEEEeCCCchhhhhhhh----cCCcEEEEEEcCCCCEEEEEeC------CCeEEEEECCCCc--EEEEee-----cCCC
Confidence 678889877654433211 11111222222 3456666664 3579999998764 222221 1111
Q ss_pred ccEEEEeCCcEEEEEcCCCCCCCCCcEEEEECCCCC--cEEEEccCCCC-----CCCCcceeEEEEEeCCeEEEecCCCC
Q 002047 230 GHVMALVGQRYLMAIGGNDGKRPLADVWALDTAAKP--YEWRKLEPEGE-----GPPPCMYATASARSDGLLLLCGGRDA 302 (975)
Q Consensus 230 ~h~~~~~~~~~lyV~GG~~g~~~~ndv~~yDl~s~~--~~W~~v~~~~~-----~P~~r~~~~a~~~~~g~lyvfGG~~~ 302 (975)
-.++....++..++.++.+.......+..||+.+.. ..+........ ..........+...++.+++.|+.++
T Consensus 118 v~~~~~~~~~~~l~~~~~~~~~~~g~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg 197 (369)
T 3zwl_B 118 VKRVEFSPCGNYFLAILDNVMKNPGSINIYEIERDSATHELTKVSEEPIHKIITHEGLDAATVAGWSTKGKYIIAGHKDG 197 (369)
T ss_dssp EEEEEECTTSSEEEEEECCBTTBCCEEEEEEEEECTTTCCEEEECSSCSEEEECCTTCCCEEEEEECGGGCEEEEEETTS
T ss_pred eEEEEEccCCCEEEEecCCccCCCCEEEEEEecCCccceeecccccceeeeccCCcCccceeEEEEcCCCCEEEEEcCCC
Confidence 223333334355565554422223467777765442 12222111100 00000122222334566677766543
Q ss_pred CCCCccceEEeecCCCCeEEEEECCCCCCCCcceeeEEEe-CCEEEEEcCcCCCCCccccCCcEEEEECCCCeEEEc
Q 002047 303 SSVPLASAYGLAKHRDGRWEWAIAPGVSPSPRYQHAAVFV-NARLHVSGGALGGGRMVEDSSSVAVLDTAAGVWCDT 378 (975)
Q Consensus 303 ~~~~l~d~~~~~~~~~~~W~w~~~~g~~P~~R~~hs~v~~-~~~L~V~GG~~~~~~~~~~~~dv~~yD~~t~~W~~v 378 (975)
.+..|+............. ....-.++++. ++.+++.|+.+ ..|.+||+.+.+....
T Consensus 198 ------~i~i~d~~~~~~~~~~~~~----~~~~v~~~~~~~~~~~l~~~~~d---------~~i~v~d~~~~~~~~~ 255 (369)
T 3zwl_B 198 ------KISKYDVSNNYEYVDSIDL----HEKSISDMQFSPDLTYFITSSRD---------TNSFLVDVSTLQVLKK 255 (369)
T ss_dssp ------EEEEEETTTTTEEEEEEEC----CSSCEEEEEECTTSSEEEEEETT---------SEEEEEETTTCCEEEE
T ss_pred ------EEEEEECCCCcEeEEEEec----CCCceeEEEECCCCCEEEEecCC---------ceEEEEECCCCceeee
Confidence 3444544432222211111 11112233333 55666777642 3488999988765443
No 114
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=88.43 E-value=5.3 Score=48.10 Aligned_cols=104 Identities=13% Similarity=0.153 Sum_probs=53.6
Q ss_pred cCcEEEEECCCCcEEEecCCCCCC---------------CCc------cceEEEEeCCEEEEEeccCCCCCccccEEEEE
Q 002047 149 TADVHCYDVLTNKWSRITPFGEPP---------------TPR------AAHVATAVGTMVVIQGGIGPAGLSAEDLHVLD 207 (975)
Q Consensus 149 ~~dv~~yD~~t~~W~~l~~~g~~P---------------~pR------~~hsa~~~~~~iyv~GG~~~~~~~~~dv~~yD 207 (975)
...++.+|+.+.+...+....... ..| ....+..-+++.++++.. ..++++|
T Consensus 63 ~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~SpDg~~l~~~~~-------~~i~~~d 135 (741)
T 2ecf_A 63 QLDLWSYDIGSGQTRLLVDSKVVLPGTETLSDEEKARRERQRIAAMTGIVDYQWSPDAQRLLFPLG-------GELYLYD 135 (741)
T ss_dssp EEEEEEEETTTCCEEEEECGGGTC--------------------CCEESCCCEECTTSSEEEEEET-------TEEEEEE
T ss_pred ccEEEEEECCCCceeEccchhhcccccccccchhhhhhhhhhhccccCcceeEECCCCCEEEEEeC-------CcEEEEE
Confidence 458999999999887765321101 000 111112224444444442 6899999
Q ss_pred cCCC---CCcEEEEEecCCCCCCCcccEEEEeCCcEEEEEcCCCCCCCCCcEEEEECCCCCcEEEEccCC
Q 002047 208 LTQQ---RPRWHRVVVQGPGPGPRYGHVMALVGQRYLMAIGGNDGKRPLADVWALDTAAKPYEWRKLEPE 274 (975)
Q Consensus 208 ~~t~---~~~W~~v~~~g~~P~~R~~h~~~~~~~~~lyV~GG~~g~~~~ndv~~yDl~s~~~~W~~v~~~ 274 (975)
+.+. . -..+. .....-...+.-.+++.++++.. +.++++|+.+. +...+...
T Consensus 136 ~~~~~~~~--~~~l~-----~~~~~~~~~~~SPDG~~la~~~~------~~i~~~d~~~g--~~~~~~~~ 190 (741)
T 2ecf_A 136 LKQEGKAA--VRQLT-----HGEGFATDAKLSPKGGFVSFIRG------RNLWVIDLASG--RQMQLTAD 190 (741)
T ss_dssp SSSCSTTS--CCBCC-----CSSSCEEEEEECTTSSEEEEEET------TEEEEEETTTT--EEEECCCC
T ss_pred CCCCCcce--EEEcc-----cCCcccccccCCCCCCEEEEEeC------CcEEEEecCCC--CEEEeccC
Confidence 9875 2 22221 11111122223233344444431 37999999988 77776543
No 115
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=88.04 E-value=31 Score=41.64 Aligned_cols=180 Identities=11% Similarity=0.056 Sum_probs=83.5
Q ss_pred cEEEEECCCCcEEEecCCCCCCCCccceEEEEe-CCEEEEEeccCCCCCccccEEEEEcCCCCCcEEEEEecCCCCCCCc
Q 002047 151 DVHCYDVLTNKWSRITPFGEPPTPRAAHVATAV-GTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGPRY 229 (975)
Q Consensus 151 dv~~yD~~t~~W~~l~~~g~~P~pR~~hsa~~~-~~~iyv~GG~~~~~~~~~dv~~yD~~t~~~~W~~v~~~g~~P~~R~ 229 (975)
.+.+||..+......-.. ..... .+++.. ++..++.|+. ...+.+||+.+.. ..... .+ ....
T Consensus 36 ~v~iwd~~~~~~~~~~~~---~~~~v-~~~~~s~~~~~l~~~~~------dg~i~vw~~~~~~--~~~~~-~~---~~~~ 99 (814)
T 3mkq_A 36 RVEIWNYETQVEVRSIQV---TETPV-RAGKFIARKNWIIVGSD------DFRIRVFNYNTGE--KVVDF-EA---HPDY 99 (814)
T ss_dssp EEEEEETTTTEEEEEEEC---CSSCE-EEEEEEGGGTEEEEEET------TSEEEEEETTTCC--EEEEE-EC---CSSC
T ss_pred EEEEEECCCCceEEEEec---CCCcE-EEEEEeCCCCEEEEEeC------CCeEEEEECCCCc--EEEEE-ec---CCCC
Confidence 688899888765443221 11111 222222 4456666664 3578999998764 32221 11 1111
Q ss_pred ccEEEEeCCcEEEEEcCCCCCCCCCcEEEEECCCCCcEEEEccCCCCCCCCcceeEEEEEe-CCeEEEecCCCCCCCCcc
Q 002047 230 GHVMALVGQRYLMAIGGNDGKRPLADVWALDTAAKPYEWRKLEPEGEGPPPCMYATASARS-DGLLLLCGGRDASSVPLA 308 (975)
Q Consensus 230 ~h~~~~~~~~~lyV~GG~~g~~~~ndv~~yDl~s~~~~W~~v~~~~~~P~~r~~~~a~~~~-~g~lyvfGG~~~~~~~l~ 308 (975)
-.+++...++..++.|+.++ .+..||+.+.. .....-.... ......+... ++.+++.|+.++.
T Consensus 100 v~~~~~s~~~~~l~~~~~dg-----~i~vw~~~~~~-~~~~~~~~~~----~~v~~~~~~p~~~~~l~~~~~dg~----- 164 (814)
T 3mkq_A 100 IRSIAVHPTKPYVLSGSDDL-----TVKLWNWENNW-ALEQTFEGHE----HFVMCVAFNPKDPSTFASGCLDRT----- 164 (814)
T ss_dssp EEEEEECSSSSEEEEEETTS-----EEEEEEGGGTS-EEEEEEECCS----SCEEEEEEETTEEEEEEEEETTSE-----
T ss_pred EEEEEEeCCCCEEEEEcCCC-----EEEEEECCCCc-eEEEEEcCCC----CcEEEEEEEcCCCCEEEEEeCCCe-----
Confidence 22333333334566666553 67888887641 2222211111 0111222222 5667777775532
Q ss_pred ceEEeecCCCCeEEEEECCCCCCCCcceeeEEEe---CCEEEEEcCcCCCCCccccCCcEEEEECCCCeE
Q 002047 309 SAYGLAKHRDGRWEWAIAPGVSPSPRYQHAAVFV---NARLHVSGGALGGGRMVEDSSSVAVLDTAAGVW 375 (975)
Q Consensus 309 d~~~~~~~~~~~W~w~~~~g~~P~~R~~hs~v~~---~~~L~V~GG~~~~~~~~~~~~dv~~yD~~t~~W 375 (975)
+..++.... .-.+..... ....-..+++. ++.++++|+.+ ..+.+||+.+.+-
T Consensus 165 -v~vwd~~~~-~~~~~~~~~---~~~~v~~~~~~~~~~~~~l~~~~~d---------g~i~~~d~~~~~~ 220 (814)
T 3mkq_A 165 -VKVWSLGQS-TPNFTLTTG---QERGVNYVDYYPLPDKPYMITASDD---------LTIKIWDYQTKSC 220 (814)
T ss_dssp -EEEEETTCS-SCSEEEECC---CTTCCCEEEECCSTTCCEEEEECTT---------SEEEEEETTTTEE
T ss_pred -EEEEECCCC-cceeEEecC---CCCCEEEEEEEECCCCCEEEEEeCC---------CEEEEEECCCCcE
Confidence 333332221 111111111 11111223332 56677777753 3488899988764
No 116
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=88.02 E-value=28 Score=36.38 Aligned_cols=96 Identities=14% Similarity=0.062 Sum_probs=47.2
Q ss_pred cEEEEECC--CCcEEEecCCCCCCCCccceEEEEe-CC-EEEEEeccCCCCCccccEEEEEcCCCCCcEEEEEecCCCCC
Q 002047 151 DVHCYDVL--TNKWSRITPFGEPPTPRAAHVATAV-GT-MVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPG 226 (975)
Q Consensus 151 dv~~yD~~--t~~W~~l~~~g~~P~pR~~hsa~~~-~~-~iyv~GG~~~~~~~~~dv~~yD~~t~~~~W~~v~~~g~~P~ 226 (975)
.+..|++. +.++..+.... ....-..++.. ++ .||+.+.. ...+++||+.... ....+... +.
T Consensus 61 ~v~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~s~dg~~l~~~~~~------~~~i~~~d~~~~~-~~~~~~~~---~~ 127 (343)
T 1ri6_A 61 RVLAYRIAPDDGALTFAAESA---LPGSLTHISTDHQGQFVFVGSYN------AGNVSVTRLEDGL-PVGVVDVV---EG 127 (343)
T ss_dssp EEEEEEECTTTCCEEEEEEEE---CSSCCSEEEECTTSSEEEEEETT------TTEEEEEEEETTE-EEEEEEEE---CC
T ss_pred eEEEEEecCCCCceeeccccc---cCCCCcEEEEcCCCCEEEEEecC------CCeEEEEECCCCc-cccccccc---cC
Confidence 56667765 77777664331 11122233333 33 56665432 2468888885211 13333221 11
Q ss_pred CCcccEEEEe-CCcEEEEEcCCCCCCCCCcEEEEECCC-C
Q 002047 227 PRYGHVMALV-GQRYLMAIGGNDGKRPLADVWALDTAA-K 264 (975)
Q Consensus 227 ~R~~h~~~~~-~~~~lyV~GG~~g~~~~ndv~~yDl~s-~ 264 (975)
...-+.++.. +++.||+.+..+ ..+.+||+.+ .
T Consensus 128 ~~~~~~~~~s~dg~~l~~~~~~~-----~~v~~~d~~~~~ 162 (343)
T 1ri6_A 128 LDGCHSANISPDNRTLWVPALKQ-----DRICLFTVSDDG 162 (343)
T ss_dssp CTTBCCCEECTTSSEEEEEEGGG-----TEEEEEEECTTS
T ss_pred CCCceEEEECCCCCEEEEecCCC-----CEEEEEEecCCC
Confidence 1223333333 333677765332 3689999987 5
No 117
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=87.98 E-value=32 Score=37.01 Aligned_cols=101 Identities=10% Similarity=0.174 Sum_probs=51.3
Q ss_pred cEEEEECCCCc------EEEecCCCCCCC-CccceEEEEe-----CCEE-EEEeccCCCCCccccEEEEEcCC------C
Q 002047 151 DVHCYDVLTNK------WSRITPFGEPPT-PRAAHVATAV-----GTMV-VIQGGIGPAGLSAEDLHVLDLTQ------Q 211 (975)
Q Consensus 151 dv~~yD~~t~~------W~~l~~~g~~P~-pR~~hsa~~~-----~~~i-yv~GG~~~~~~~~~dv~~yD~~t------~ 211 (975)
.+.+||+.+.. +..+..... .. ...-.+++.. ++.. ++.|+. ...+.+||+.+ .
T Consensus 92 ~i~iw~~~~~~~~~~~~~~~~~~~~~-~~~~~~v~~~~~~~~~~~~~~~~l~~~~~------dg~i~iwd~~~~~~~~~~ 164 (397)
T 1sq9_A 92 DLLFYRITREDETKKVIFEKLDLLDS-DMKKHSFWALKWGASNDRLLSHRLVATDV------KGTTYIWKFHPFADESNS 164 (397)
T ss_dssp CEEEEEEEECTTTCCEEEEEECCSCT-TGGGSCEEEEEEECCC----CEEEEEEET------TSCEEEEEEESSSSHHHH
T ss_pred CEEEEEccCCcccccccceeeccccc-ccCCCcEEEEEEeeccCCCCceEEEEEeC------CCcEEEEeCCcccccccc
Confidence 57788877766 777654310 00 1222233333 3444 666664 24688888876 3
Q ss_pred C-CcEE---EEEe--cCCCCCCCcccEEEEeCCcEEEEEcCCCCCCCCCcEEEEECCCC
Q 002047 212 R-PRWH---RVVV--QGPGPGPRYGHVMALVGQRYLMAIGGNDGKRPLADVWALDTAAK 264 (975)
Q Consensus 212 ~-~~W~---~v~~--~g~~P~~R~~h~~~~~~~~~lyV~GG~~g~~~~ndv~~yDl~s~ 264 (975)
. ..|. .+.. .........-.++....++ +++.|+.++ .+..||+.+.
T Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~l~~~~~dg-----~i~i~d~~~~ 217 (397)
T 1sq9_A 165 LTLNWSPTLELQGTVESPMTPSQFATSVDISERG-LIATGFNNG-----TVQISELSTL 217 (397)
T ss_dssp TTTCCCCEEEEEEEECCSSSSCCCCCEEEECTTS-EEEEECTTS-----EEEEEETTTT
T ss_pred ceeeccCcceeeeeeccccCCCCCceEEEECCCc-eEEEEeCCC-----cEEEEECCCC
Confidence 2 1222 1110 0001122223445555565 777776654 6889999877
No 118
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=87.85 E-value=19 Score=38.35 Aligned_cols=101 Identities=12% Similarity=0.138 Sum_probs=51.4
Q ss_pred CcEEEEECCCCcEEEecCCCCCCCCccceEEEEe-C-CEEEEEeccCCCCCccccEEEEEcCCCCCcEEEEE---ecCCC
Q 002047 150 ADVHCYDVLTNKWSRITPFGEPPTPRAAHVATAV-G-TMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVV---VQGPG 224 (975)
Q Consensus 150 ~dv~~yD~~t~~W~~l~~~g~~P~pR~~hsa~~~-~-~~iyv~GG~~~~~~~~~dv~~yD~~t~~~~W~~v~---~~g~~ 224 (975)
..++.||+.+..++.+.... .....-..++.. + ..||+.+.. ...+.+||+.... +...+. ..+..
T Consensus 63 ~~v~~~~~~~g~~~~~~~~~--~~~~~p~~~a~spdg~~l~~~~~~------~~~v~v~~~~~~g-~~~~~~~~~~~~~~ 133 (347)
T 3hfq_A 63 GGIAAWQIDGQTAHKLNTVV--APGTPPAYVAVDEARQLVYSANYH------KGTAEVMKIAADG-ALTLTDTVQHSGHG 133 (347)
T ss_dssp EEEEEEEEETTEEEEEEEEE--EESCCCSEEEEETTTTEEEEEETT------TTEEEEEEECTTS-CEEEEEEEECCCCC
T ss_pred ceEEEEEecCCcEEEeeeee--cCCCCCEEEEECCCCCEEEEEeCC------CCEEEEEEeCCCC-CeeecceeecCCCC
Confidence 47889999888877665410 011111223333 3 366666532 2468888885321 233332 22222
Q ss_pred CCCCc----ccEEEEeCCcEEEEEcCCCCCCCCCcEEEEECC-CC
Q 002047 225 PGPRY----GHVMALVGQRYLMAIGGNDGKRPLADVWALDTA-AK 264 (975)
Q Consensus 225 P~~R~----~h~~~~~~~~~lyV~GG~~g~~~~ndv~~yDl~-s~ 264 (975)
|..|. -+.+++-.++++|+.+..+ +.+++||+. +.
T Consensus 134 p~~~~~~~~~~~~~~spdg~l~v~~~~~-----~~v~~~~~~~~g 173 (347)
T 3hfq_A 134 PRPEQDGSHIHYTDLTPDNRLAVIDLGS-----DKVYVYNVSDAG 173 (347)
T ss_dssp SSTTCSSCCEEEEEECTTSCEEEEETTT-----TEEEEEEECTTS
T ss_pred CCccccCCCceEEEECCCCcEEEEeCCC-----CEEEEEEECCCC
Confidence 32222 2334444444577765432 478889987 44
No 119
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=87.79 E-value=11 Score=38.47 Aligned_cols=198 Identities=8% Similarity=-0.092 Sum_probs=94.8
Q ss_pred cEEEEECCC-CcEEEecCCCCCCCCccceEEEEeCCEEEEEeccCCCCCccccEEEEEcCCCCCcEEEEEecCCCCCCCc
Q 002047 151 DVHCYDVLT-NKWSRITPFGEPPTPRAAHVATAVGTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGPRY 229 (975)
Q Consensus 151 dv~~yD~~t-~~W~~l~~~g~~P~pR~~hsa~~~~~~iyv~GG~~~~~~~~~dv~~yD~~t~~~~W~~v~~~g~~P~~R~ 229 (975)
.++++|+.+ .....+.... ........+..-+++.+++++.... ....+|.+++.+.. ...+. ... .
T Consensus 63 ~i~~~d~~~~~~~~~~~~~~--~~~~~~~~~~spdg~~l~~~~~~~~--~~~~l~~~~~~~~~--~~~~~---~~~--~- 130 (297)
T 2ojh_A 63 LLYRLSLAGDPSPEKVDTGF--ATICNNDHGISPDGALYAISDKVEF--GKSAIYLLPSTGGT--PRLMT---KNL--P- 130 (297)
T ss_dssp EEEEEESSSCCSCEECCCTT--CCCBCSCCEECTTSSEEEEEECTTT--SSCEEEEEETTCCC--CEECC---SSS--S-
T ss_pred eEEEEeCCCCCCceEecccc--ccccccceEECCCCCEEEEEEeCCC--CcceEEEEECCCCc--eEEee---cCC--C-
Confidence 789999998 7777664321 1112222222224455555553222 24678888887653 33332 111 1
Q ss_pred ccEEEEe-CCcEEEEEcCCCCCCCCCcEEEEECCCCCcEEEEccCCCCCCCCcceeEEEEEeCCeEEEecC-CCCCCCCc
Q 002047 230 GHVMALV-GQRYLMAIGGNDGKRPLADVWALDTAAKPYEWRKLEPEGEGPPPCMYATASARSDGLLLLCGG-RDASSVPL 307 (975)
Q Consensus 230 ~h~~~~~-~~~~lyV~GG~~g~~~~ndv~~yDl~s~~~~W~~v~~~~~~P~~r~~~~a~~~~~g~lyvfGG-~~~~~~~l 307 (975)
...+... +++.|++.++.++. ..+|.+|+.+. ....+..... .........+++.+++++ .++ .
T Consensus 131 ~~~~~~spdg~~l~~~~~~~~~---~~l~~~~~~~~--~~~~~~~~~~-----~~~~~~~s~dg~~l~~~~~~~~----~ 196 (297)
T 2ojh_A 131 SYWHGWSPDGKSFTYCGIRDQV---FDIYSMDIDSG--VETRLTHGEG-----RNDGPDYSPDGRWIYFNSSRTG----Q 196 (297)
T ss_dssp EEEEEECTTSSEEEEEEEETTE---EEEEEEETTTC--CEEECCCSSS-----CEEEEEECTTSSEEEEEECTTS----S
T ss_pred ccceEECCCCCEEEEEECCCCc---eEEEEEECCCC--cceEcccCCC-----ccccceECCCCCEEEEEecCCC----C
Confidence 2222333 34356555554432 37888888777 6665543322 222233334565444443 332 3
Q ss_pred cceEEeecCCCCeEEEEECCCCCCCCcceeeEEEe-CCEEEEEcCcCCCCCcc--ccCCcEEEEECCCCeEEEccc
Q 002047 308 ASAYGLAKHRDGRWEWAIAPGVSPSPRYQHAAVFV-NARLHVSGGALGGGRMV--EDSSSVAVLDTAAGVWCDTKS 380 (975)
Q Consensus 308 ~d~~~~~~~~~~~W~w~~~~g~~P~~R~~hs~v~~-~~~L~V~GG~~~~~~~~--~~~~dv~~yD~~t~~W~~v~~ 380 (975)
..+|.++.... . ....... .......++. +++.+++++........ .....++++|+.+.+...+..
T Consensus 197 ~~i~~~~~~~~-~--~~~~~~~---~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~~~~ 266 (297)
T 2ojh_A 197 MQIWRVRVDGS-S--VERITDS---AYGDWFPHPSPSGDKVVFVSYDADVFDHPRDLDVRVQLMDMDGGNVETLFD 266 (297)
T ss_dssp CEEEEEETTSS-C--EEECCCC---SEEEEEEEECTTSSEEEEEEEETTCCSCCSSEEEEEEEEETTSCSCEEEEE
T ss_pred ccEEEECCCCC-C--cEEEecC---CcccCCeEECCCCCEEEEEEcCCCCCcccccCceEEEEEecCCCCceeeec
Confidence 45666654333 1 2222211 1111222222 45555555543221100 012569999999987766554
No 120
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=87.68 E-value=21 Score=39.55 Aligned_cols=93 Identities=13% Similarity=0.149 Sum_probs=51.7
Q ss_pred CcEEEEECCCCcEEEecCCCCCCCCccceEEEEe--CCEEEEEeccCCCCCccccEEEEEcCCCCCcEEEEEecCCCCCC
Q 002047 150 ADVHCYDVLTNKWSRITPFGEPPTPRAAHVATAV--GTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGP 227 (975)
Q Consensus 150 ~dv~~yD~~t~~W~~l~~~g~~P~pR~~hsa~~~--~~~iyv~GG~~~~~~~~~dv~~yD~~t~~~~W~~v~~~g~~P~~ 227 (975)
+.|+++|..+++...+-... .....-.++.+ ++.+++.|+. ...+.+||+.+.. .+.. +...
T Consensus 125 ~tV~lWd~~tg~~~~~~~~~---~~~~~V~sv~fspdg~~lasgs~------Dg~v~iWd~~~~~----~~~~---~~~h 188 (420)
T 4gga_A 125 NSVYLWSASSGDILQLLQME---QPGEYISSVAWIKEGNYLAVGTS------SAEVQLWDVQQQK----RLRN---MTSH 188 (420)
T ss_dssp TEEEEEETTTCCEEEEEECC---STTCCEEEEEECTTSSEEEEEET------TSCEEEEETTTTE----EEEE---ECCC
T ss_pred CEEEEEECCCCCEEEEEEec---CCCCcEEEEEECCCCCEEEEEEC------CCeEEEEEcCCCc----EEEE---EeCC
Confidence 47899999998876654321 11111122222 4466777764 3568999998753 2221 1111
Q ss_pred CcccEEEEeCCcEEEEEcCCCCCCCCCcEEEEECCCC
Q 002047 228 RYGHVMALVGQRYLMAIGGNDGKRPLADVWALDTAAK 264 (975)
Q Consensus 228 R~~h~~~~~~~~~lyV~GG~~g~~~~ndv~~yDl~s~ 264 (975)
.....+...++ .+++.|+.++ .++.+|....
T Consensus 189 ~~~v~~~s~~~-~~l~sgs~d~-----~i~~~d~~~~ 219 (420)
T 4gga_A 189 SARVGSLSWNS-YILSSGSRSG-----HIHHHDVRVA 219 (420)
T ss_dssp SSCEEEEEEET-TEEEEEETTS-----EEEEEETTSS
T ss_pred CCceEEEeeCC-CEEEEEeCCC-----ceeEeeeccc
Confidence 22233344555 5777777654 5677777654
No 121
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=87.65 E-value=49 Score=38.76 Aligned_cols=82 Identities=11% Similarity=0.025 Sum_probs=46.3
Q ss_pred CEEEEEeccC---------CCCCccccEEEEEcCCCCCcEEEEEecCCCCCCCcccEEEEe----CCc--EEEEEcCCCC
Q 002047 185 TMVVIQGGIG---------PAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGPRYGHVMALV----GQR--YLMAIGGNDG 249 (975)
Q Consensus 185 ~~iyv~GG~~---------~~~~~~~dv~~yD~~t~~~~W~~v~~~g~~P~~R~~h~~~~~----~~~--~lyV~GG~~g 249 (975)
+.||+..|.. .+..+...++.+|+.+....|+.-........-......+++ +++ ++++++..++
T Consensus 247 g~vy~~~g~~~~~~~~~~~gd~~y~~~v~Ald~~tG~~~W~~~~~~~d~~d~~~~~~p~l~~~~~~G~~~~~v~~~~~~G 326 (571)
T 2ad6_A 247 NLFYYGSGNPAPWNETMRPGDNKWTMTIWGRDLDTGMAKWGYQKTPHDEWDFAGVNQMVLTDQPVNGKMTPLLSHIDRNG 326 (571)
T ss_dssp TEEEEECCCCSCSCGGGSCSCCTTTTEEEEEETTTCCEEEEEESSTTCSSCCCCCCCCEEEEEEETTEEEEEEEEECTTS
T ss_pred CeEEEECCCCccccCCccCCCceeEEEEEEEecCCCcEEEEecCCCCcccccccCCCCEEEecccCCcEEEEEEEeCCCc
Confidence 5777765531 122234579999999887779865421111111111122222 332 3666665543
Q ss_pred CCCCCcEEEEECCCCCcEEEEc
Q 002047 250 KRPLADVWALDTAAKPYEWRKL 271 (975)
Q Consensus 250 ~~~~ndv~~yDl~s~~~~W~~v 271 (975)
.++++|..+....|..-
T Consensus 327 -----~l~~lD~~tG~~~w~~~ 343 (571)
T 2ad6_A 327 -----ILYTLNRENGNLIVAEK 343 (571)
T ss_dssp -----EEEEEETTTCCEEEEEE
T ss_pred -----EEEEEECCCCCEEeeec
Confidence 68999999887788753
No 122
>3tgh_A Glideosome-associated protein 50; phosphatase fold, NOT A phosphatase, motor protein, structur protein, membrane protein; 1.70A {Plasmodium falciparum 3D7}
Probab=87.61 E-value=0.22 Score=55.15 Aligned_cols=26 Identities=12% Similarity=0.303 Sum_probs=21.1
Q ss_pred HHHHHHHHHHcCCeEEEEeccccccc
Q 002047 884 PDRVMEFCNNNDLQLIVRAHECVMDG 909 (975)
Q Consensus 884 ~~~~~~fl~~~~l~~iiR~H~~~~~G 909 (975)
.+.+...|+++++++++-||.-..+-
T Consensus 214 ~~~l~~ll~~~~VdlvlsGH~H~~~~ 239 (342)
T 3tgh_A 214 AYYLLPLLKDAEVDLYISGHDNNMEV 239 (342)
T ss_dssp HHHTHHHHHHTTCCEEEECSSSSEEE
T ss_pred HHHHHHHHHHcCCCEEEECCCcceeE
Confidence 35678899999999999999866443
No 123
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=87.23 E-value=33 Score=36.39 Aligned_cols=149 Identities=15% Similarity=0.189 Sum_probs=75.0
Q ss_pred CEEEEEeccCCCCCccccEEEEEcCCCCCcEEEEEecCCCCCCCcccEEEEeCCcEEEEEcCCCCCCCCCcEEEEECCCC
Q 002047 185 TMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGPRYGHVMALVGQRYLMAIGGNDGKRPLADVWALDTAAK 264 (975)
Q Consensus 185 ~~iyv~GG~~~~~~~~~dv~~yD~~t~~~~W~~v~~~g~~P~~R~~h~~~~~~~~~lyV~GG~~g~~~~ndv~~yDl~s~ 264 (975)
..+++.|+. ...+.+||+.+.. .-..+. .+ + ..-.+++...++..++.|+.++ .+..||+.+.
T Consensus 92 ~~~l~s~s~------D~~i~lWd~~~~~-~~~~~~-~~--~--~~~~~~~~spdg~~l~~g~~dg-----~v~i~~~~~~ 154 (321)
T 3ow8_A 92 LPIAASSSL------DAHIRLWDLENGK-QIKSID-AG--P--VDAWTLAFSPDSQYLATGTHVG-----KVNIFGVESG 154 (321)
T ss_dssp SSEEEEEET------TSEEEEEETTTTE-EEEEEE-CC--T--TCCCCEEECTTSSEEEEECTTS-----EEEEEETTTC
T ss_pred CCEEEEEeC------CCcEEEEECCCCC-EEEEEe-CC--C--ccEEEEEECCCCCEEEEEcCCC-----cEEEEEcCCC
Confidence 356666664 3578899998753 122222 11 1 1122344444446777777654 6788888876
Q ss_pred CcEEEEccCCCCCCCCcceeEEEEEeCCeEEEecCCCCCCCCccceEEeecCCCCeEEEEECCCCCCCCcceeeEEEe-C
Q 002047 265 PYEWRKLEPEGEGPPPCMYATASARSDGLLLLCGGRDASSVPLASAYGLAKHRDGRWEWAIAPGVSPSPRYQHAAVFV-N 343 (975)
Q Consensus 265 ~~~W~~v~~~~~~P~~r~~~~a~~~~~g~lyvfGG~~~~~~~l~d~~~~~~~~~~~W~w~~~~g~~P~~R~~hs~v~~-~ 343 (975)
...+..... . ......+...++++++.|+.++. +..++.... .-... ..+. ...-.++++. +
T Consensus 155 ~~~~~~~~~-~-----~~v~~~~~spdg~~lasg~~dg~------i~iwd~~~~-~~~~~-~~~h---~~~v~~l~~spd 217 (321)
T 3ow8_A 155 KKEYSLDTR-G-----KFILSIAYSPDGKYLASGAIDGI------INIFDIATG-KLLHT-LEGH---AMPIRSLTFSPD 217 (321)
T ss_dssp SEEEEEECS-S-----SCEEEEEECTTSSEEEEEETTSC------EEEEETTTT-EEEEE-ECCC---SSCCCEEEECTT
T ss_pred ceeEEecCC-C-----ceEEEEEECCCCCEEEEEcCCCe------EEEEECCCC-cEEEE-Eccc---CCceeEEEEcCC
Confidence 333322111 1 12223333457788888876542 333433322 21111 1111 1111123332 5
Q ss_pred CEEEEEcCcCCCCCccccCCcEEEEECCCCeEE
Q 002047 344 ARLHVSGGALGGGRMVEDSSSVAVLDTAAGVWC 376 (975)
Q Consensus 344 ~~L~V~GG~~~~~~~~~~~~dv~~yD~~t~~W~ 376 (975)
+.+++.|+.++ .|.+||+.+....
T Consensus 218 ~~~l~s~s~dg---------~i~iwd~~~~~~~ 241 (321)
T 3ow8_A 218 SQLLVTASDDG---------YIKIYDVQHANLA 241 (321)
T ss_dssp SCEEEEECTTS---------CEEEEETTTCCEE
T ss_pred CCEEEEEcCCC---------eEEEEECCCccee
Confidence 67888887543 3888999877643
No 124
>3qfk_A Uncharacterized protein; structural genomics, center for structural genomics of infec diseases, csgid, phosphoesterase, hydrolase; HET: MSE AKG; 2.05A {Staphylococcus aureus subsp}
Probab=87.07 E-value=0.34 Score=57.04 Aligned_cols=68 Identities=13% Similarity=0.094 Sum_probs=43.1
Q ss_pred cCCEEEEecCCCCHH----------------HHHHHHHHhCCCCCCCCccceeEEEeccccCCCCCh----------HHH
Q 002047 697 KAPIKIFGDLHGQFG----------------DLMRLFDEYGSPSTAGDIAYIDYLFLGDYVDRGQHS----------LET 750 (975)
Q Consensus 697 ~~~i~vvGDiHG~~~----------------~L~~ll~~~g~~~~~~~~~~~~~vfLGDyVDRG~~s----------~ev 750 (975)
+.+|+.++|+||.+. .|..+++.+.-... ..-+|..||.+++.+.+ ..+
T Consensus 19 ~l~Il~tnD~Hg~~~~~~~~~~~~~~~gG~a~l~~~i~~~r~~~~-----~~l~l~~GD~~~gs~~~~~~~~~~~~~~~~ 93 (527)
T 3qfk_A 19 NIAFYVVSDVHGYIFPTDFTSRNQYQPMGLLLANHVIEQDRRQYD-----QSFKIDNGDFLQGSPFCNYLIAHSGSSQPL 93 (527)
T ss_dssp EEEEEEECCCTTCCSSCCSSSTTCCCSCSHHHHHHHHHHHHTTSS-----EEEEEECSCCSSSSHHHHHHHHTTCSSHHH
T ss_pred cEEEEEEeccCCCccCcccccCCCcCCCcHHHHHHHHHHHHhcCC-----CEEEEECCCcCCCcHHHHHHhhcccCcchH
Confidence 346899999999863 56666666532211 11345579999987543 355
Q ss_pred HHHHHHhhhcCCCCEEEEeccccc
Q 002047 751 ITLLLALKVEYPNNVHLIRGNHEA 774 (975)
Q Consensus 751 l~ll~~lk~~~P~~v~llrGNHE~ 774 (975)
+.+|-.+. --++..||||.
T Consensus 94 ~~~ln~lg-----~D~~t~GNHef 112 (527)
T 3qfk_A 94 VDFYNRMA-----FDFGTLGNHEF 112 (527)
T ss_dssp HHHHHHTC-----CCEECCCGGGG
T ss_pred HHHHHhcC-----CcEEecccccc
Confidence 66665552 22456899995
No 125
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=86.92 E-value=20 Score=38.79 Aligned_cols=99 Identities=11% Similarity=0.086 Sum_probs=49.4
Q ss_pred cCcEEEEECCCCcEEEecCCCCCCC-----------CccceEEEEeCCEEEEEeccCCCCCccccEEEEEcCCCCCcEEE
Q 002047 149 TADVHCYDVLTNKWSRITPFGEPPT-----------PRAAHVATAVGTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHR 217 (975)
Q Consensus 149 ~~dv~~yD~~t~~W~~l~~~g~~P~-----------pR~~hsa~~~~~~iyv~GG~~~~~~~~~dv~~yD~~t~~~~W~~ 217 (975)
-..+..||+.+......-.....+. ...-.+++...+..++.|+. ...+++||+.+..... .
T Consensus 170 d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~g~i~~~d~~~~~~~~-~ 242 (425)
T 1r5m_A 170 ENVTILWNVISGTVMQHFELKETGGSSINAENHSGDGSLGVDVEWVDDDKFVIPGP------KGAIFVYQITEKTPTG-K 242 (425)
T ss_dssp TCCEEEEETTTTEEEEEECCC---------------CCCBSCCEEEETTEEEEECG------GGCEEEEETTCSSCSE-E
T ss_pred CCeEEEEECCCCcEEEEeeccccCccceeeccccCCcceeeEEEEcCCCEEEEEcC------CCeEEEEEcCCCceee-e
Confidence 3568889988776544332211110 00022233333334555554 3579999998764222 2
Q ss_pred EEecCCCCCCCcccEEEEeCCcEEEEEcCCCCCCCCCcEEEEECCCC
Q 002047 218 VVVQGPGPGPRYGHVMALVGQRYLMAIGGNDGKRPLADVWALDTAAK 264 (975)
Q Consensus 218 v~~~g~~P~~R~~h~~~~~~~~~lyV~GG~~g~~~~ndv~~yDl~s~ 264 (975)
+. .....-.+++...++.+++.|+.++ .+..||+.+.
T Consensus 243 ~~-----~~~~~i~~~~~~~~~~~l~~~~~d~-----~i~i~d~~~~ 279 (425)
T 1r5m_A 243 LI-----GHHGPISVLEFNDTNKLLLSASDDG-----TLRIWHGGNG 279 (425)
T ss_dssp EC-----CCSSCEEEEEEETTTTEEEEEETTS-----CEEEECSSSB
T ss_pred ec-----cCCCceEEEEECCCCCEEEEEcCCC-----EEEEEECCCC
Confidence 21 1111122333443445666776554 5888888765
No 126
>1hp1_A 5'-nucleotidase; metallophosphatase, dinuclear, metalloenzyme, hydrolase, domain movement; HET: ATP; 1.70A {Escherichia coli} SCOP: d.114.1.1 d.159.1.2 PDB: 1ush_A 2ush_A 1hpu_A* 1ho5_A* 1oi8_A 1oid_A 1oie_A
Probab=86.67 E-value=0.29 Score=57.40 Aligned_cols=72 Identities=21% Similarity=0.123 Sum_probs=42.3
Q ss_pred cCCEEEEecCCCCHH----------HHHHHHHHhCCCCCCCCccceeEEEeccccCCCCC-----hHHHHHHHHHhhhcC
Q 002047 697 KAPIKIFGDLHGQFG----------DLMRLFDEYGSPSTAGDIAYIDYLFLGDYVDRGQH-----SLETITLLLALKVEY 761 (975)
Q Consensus 697 ~~~i~vvGDiHG~~~----------~L~~ll~~~g~~~~~~~~~~~~~vfLGDyVDRG~~-----s~evl~ll~~lk~~~ 761 (975)
..+|+.++|+||.+. .+..+++.+.-.... .....-+|..||+++..+. ...++.+|-.|.
T Consensus 8 ~l~Il~~~D~H~~~~~~~~~~~G~~~~~~~v~~~r~~~~~-~~~~~lvl~~GD~~~g~~~~~~~~~~~~~~~ln~lg--- 83 (516)
T 1hp1_A 8 KITVLHTNDHHGHFWRNEYGEYGLAAQKTLVDGIRKEVAA-EGGSVLLLSGGDINTGVPESDLQDAEPDFRGMNLVG--- 83 (516)
T ss_dssp EEEEEEECCCTTCCSCCTTSCCCHHHHHHHHHHHHHHHHH-HTCEEEEEECSCCSSSCHHHHTTTTHHHHHHHHHHT---
T ss_pred EEEEEEecccccCccCCCCCCcCHHHHHHHHHHHHHhhhc-cCCCEEEEeCCccCCCcchhhhcCCcHHHHHHhccC---
Confidence 356899999999853 455555544210000 0000146779999976542 235566666653
Q ss_pred CCCEEEEeccccc
Q 002047 762 PNNVHLIRGNHEA 774 (975)
Q Consensus 762 P~~v~llrGNHE~ 774 (975)
-.++..||||.
T Consensus 84 --~d~~~~GNHEf 94 (516)
T 1hp1_A 84 --YDAMAIGNHEF 94 (516)
T ss_dssp --CCEEECCGGGG
T ss_pred --CCEEeeccccc
Confidence 23677899997
No 127
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=86.40 E-value=24 Score=36.95 Aligned_cols=93 Identities=13% Similarity=0.099 Sum_probs=47.7
Q ss_pred cEEEEECCCCcEEEecCCCCCCCCccceEEEEe-CCEEEEEeccCCCCCccccEEEEEcCCCCCcEEEEEecCCCCCCCc
Q 002047 151 DVHCYDVLTNKWSRITPFGEPPTPRAAHVATAV-GTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGPRY 229 (975)
Q Consensus 151 dv~~yD~~t~~W~~l~~~g~~P~pR~~hsa~~~-~~~iyv~GG~~~~~~~~~dv~~yD~~t~~~~W~~v~~~g~~P~~R~ 229 (975)
.+..||+.+..-...-.. ..... .++... ++.+++.|+. ...+.+||+.+.. .-..+. + ....
T Consensus 36 ~v~lWd~~~~~~~~~~~~---~~~~v-~~~~~~~~~~~l~s~s~------d~~i~vwd~~~~~-~~~~~~--~---h~~~ 99 (304)
T 2ynn_A 36 RVELWNYETQVEVRSIQV---TETPV-RAGKFIARKNWIIVGSD------DFRIRVFNYNTGE-KVVDFE--A---HPDY 99 (304)
T ss_dssp EEEEEETTTTEEEEEEEC---CSSCE-EEEEEEGGGTEEEEEET------TSEEEEEETTTCC-EEEEEE--C---CSSC
T ss_pred cEEEEECCCCceeEEeec---cCCcE-EEEEEeCCCCEEEEECC------CCEEEEEECCCCc-EEEEEe--C---CCCc
Confidence 677888887654332111 01111 122222 4456666664 3578999998763 222222 1 1111
Q ss_pred ccEEEEeCCcEEEEEcCCCCCCCCCcEEEEECCCC
Q 002047 230 GHVMALVGQRYLMAIGGNDGKRPLADVWALDTAAK 264 (975)
Q Consensus 230 ~h~~~~~~~~~lyV~GG~~g~~~~ndv~~yDl~s~ 264 (975)
-.+++...++.+++.|+.++ .+..||+.+.
T Consensus 100 v~~~~~~~~~~~l~sgs~D~-----~v~lWd~~~~ 129 (304)
T 2ynn_A 100 IRSIAVHPTKPYVLSGSDDL-----TVKLWNWENN 129 (304)
T ss_dssp EEEEEECSSSSEEEEEETTS-----CEEEEEGGGT
T ss_pred EEEEEEcCCCCEEEEECCCC-----eEEEEECCCC
Confidence 22333334445777777665 5777887654
No 128
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=86.24 E-value=40 Score=36.30 Aligned_cols=180 Identities=8% Similarity=-0.003 Sum_probs=82.2
Q ss_pred cEEEEECCCCcEEEecCCCCCCCCccceEEEEe-CCEEEEEeccCCCCCccccEEEEEcCCCCCcEEEEEecCCCC----
Q 002047 151 DVHCYDVLTNKWSRITPFGEPPTPRAAHVATAV-GTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGP---- 225 (975)
Q Consensus 151 dv~~yD~~t~~W~~l~~~g~~P~pR~~hsa~~~-~~~iyv~GG~~~~~~~~~dv~~yD~~t~~~~W~~v~~~g~~P---- 225 (975)
.+..||........+... ...-.+++.. ++..++.|+. ...+.+||+.+.. ..........+
T Consensus 131 ~i~i~~~~~~~~~~~~~~-----~~~v~~~~~~~~~~~l~~~~~------d~~i~iwd~~~~~--~~~~~~~~~~~~~~~ 197 (425)
T 1r5m_A 131 ELRLWNKTGALLNVLNFH-----RAPIVSVKWNKDGTHIISMDV------ENVTILWNVISGT--VMQHFELKETGGSSI 197 (425)
T ss_dssp CEEEEETTSCEEEEECCC-----CSCEEEEEECTTSSEEEEEET------TCCEEEEETTTTE--EEEEECCC-------
T ss_pred eEEEEeCCCCeeeeccCC-----CccEEEEEECCCCCEEEEEec------CCeEEEEECCCCc--EEEEeeccccCccce
Confidence 577788555444444322 1112223332 3455555554 3468899997753 22211000000
Q ss_pred -------CCCcccEEEEeCCcEEEEEcCCCCCCCCCcEEEEECCCCCcEEEEccCCCCCCCCcceeEEEEEeCCeEEEec
Q 002047 226 -------GPRYGHVMALVGQRYLMAIGGNDGKRPLADVWALDTAAKPYEWRKLEPEGEGPPPCMYATASARSDGLLLLCG 298 (975)
Q Consensus 226 -------~~R~~h~~~~~~~~~lyV~GG~~g~~~~ndv~~yDl~s~~~~W~~v~~~~~~P~~r~~~~a~~~~~g~lyvfG 298 (975)
....-.+++...++ .++.|+.+ ..+..||+.+......... .. ..........++.+++.|
T Consensus 198 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~-----g~i~~~d~~~~~~~~~~~~-~~-----~~i~~~~~~~~~~~l~~~ 265 (425)
T 1r5m_A 198 NAENHSGDGSLGVDVEWVDDD-KFVIPGPK-----GAIFVYQITEKTPTGKLIG-HH-----GPISVLEFNDTNKLLLSA 265 (425)
T ss_dssp --------CCCBSCCEEEETT-EEEEECGG-----GCEEEEETTCSSCSEEECC-CS-----SCEEEEEEETTTTEEEEE
T ss_pred eeccccCCcceeeEEEEcCCC-EEEEEcCC-----CeEEEEEcCCCceeeeecc-CC-----CceEEEEECCCCCEEEEE
Confidence 00002333334443 56666655 3689999987632222211 11 122233344466777777
Q ss_pred CCCCCCCCccceEEeecCCCCeEEEEECCCCCCCCcceeeEEEe-CCEEEEEcCcCCCCCccccCCcEEEEECCCCeEE
Q 002047 299 GRDASSVPLASAYGLAKHRDGRWEWAIAPGVSPSPRYQHAAVFV-NARLHVSGGALGGGRMVEDSSSVAVLDTAAGVWC 376 (975)
Q Consensus 299 G~~~~~~~l~d~~~~~~~~~~~W~w~~~~g~~P~~R~~hs~v~~-~~~L~V~GG~~~~~~~~~~~~dv~~yD~~t~~W~ 376 (975)
+.++. +..++.... ....... .....-.++++. ++ +++.|+.+ ..+.+||+.+.+-.
T Consensus 266 ~~d~~------i~i~d~~~~-~~~~~~~----~~~~~i~~~~~~~~~-~l~~~~~d---------~~i~i~d~~~~~~~ 323 (425)
T 1r5m_A 266 SDDGT------LRIWHGGNG-NSQNCFY----GHSQSIVSASWVGDD-KVISCSMD---------GSVRLWSLKQNTLL 323 (425)
T ss_dssp ETTSC------EEEECSSSB-SCSEEEC----CCSSCEEEEEEETTT-EEEEEETT---------SEEEEEETTTTEEE
T ss_pred cCCCE------EEEEECCCC-ccceEec----CCCccEEEEEECCCC-EEEEEeCC---------CcEEEEECCCCcEe
Confidence 75432 233332221 1111111 111222334444 44 66666643 34889999887643
No 129
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=85.91 E-value=37 Score=36.30 Aligned_cols=99 Identities=7% Similarity=0.065 Sum_probs=48.3
Q ss_pred cEEEEECCCCcEEEecCCCCCCCCccceEEEEe--CCEEEEEeccCCCCCccccEEEEEcCCCCCcEEEEEecCCCCCCC
Q 002047 151 DVHCYDVLTNKWSRITPFGEPPTPRAAHVATAV--GTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGPR 228 (975)
Q Consensus 151 dv~~yD~~t~~W~~l~~~g~~P~pR~~hsa~~~--~~~iyv~GG~~~~~~~~~dv~~yD~~t~~~~W~~v~~~g~~P~~R 228 (975)
.+|.+|..+.+++.+... ....|+ .++.. +..||+.+..+. ....+.+|++...+.+.+.+..... ...
T Consensus 30 ~~~~~d~~~g~~~~~~~~-~~~~p~---~l~~spdg~~l~~~~~~~~---~~~~v~~~~~~~~~g~~~~~~~~~~--~~~ 100 (361)
T 3scy_A 30 YTFRFNEETGESLPLSDA-EVANPS---YLIPSADGKFVYSVNEFSK---DQAAVSAFAFDKEKGTLHLLNTQKT--MGA 100 (361)
T ss_dssp EEEEEETTTCCEEEEEEE-ECSCCC---SEEECTTSSEEEEEECCSS---TTCEEEEEEEETTTTEEEEEEEEEC--SSS
T ss_pred EEEEEeCCCCCEEEeecc-cCCCCc---eEEECCCCCEEEEEEccCC---CCCcEEEEEEeCCCCcEEEeeEecc--CCC
Confidence 456678888888776543 111222 12222 335666654311 1245666665543224555542110 111
Q ss_pred cccEEEEeCCcEEEEEcCCCCCCCCCcEEEEECCCC
Q 002047 229 YGHVMALVGQRYLMAIGGNDGKRPLADVWALDTAAK 264 (975)
Q Consensus 229 ~~h~~~~~~~~~lyV~GG~~g~~~~ndv~~yDl~s~ 264 (975)
.-+..+. +++.||+....+ ..+.+||+...
T Consensus 101 ~p~~~~~-dg~~l~~~~~~~-----~~v~~~~~~~~ 130 (361)
T 3scy_A 101 DPCYLTT-NGKNIVTANYSG-----GSITVFPIGQD 130 (361)
T ss_dssp CEEEEEE-CSSEEEEEETTT-----TEEEEEEBCTT
T ss_pred CcEEEEE-CCCEEEEEECCC-----CEEEEEEeCCC
Confidence 1222223 665777765432 46788888643
No 130
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=85.86 E-value=30 Score=38.51 Aligned_cols=173 Identities=13% Similarity=0.058 Sum_probs=84.6
Q ss_pred CcEEEEECCCCcEEEecCCCCCCCCccceEEEEe-CCEEEEEeccCCCCCccccEEEEEcCCCCCcEEEEEecCCCCCCC
Q 002047 150 ADVHCYDVLTNKWSRITPFGEPPTPRAAHVATAV-GTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGPR 228 (975)
Q Consensus 150 ~dv~~yD~~t~~W~~l~~~g~~P~pR~~hsa~~~-~~~iyv~GG~~~~~~~~~dv~~yD~~t~~~~W~~v~~~g~~P~~R 228 (975)
..+..||+.+.+-...-.. .. ..-.+++.. ++..++.|+. ...+.+||+.+.. .+.. +....
T Consensus 290 ~~i~vwd~~~~~~~~~~~~---~~-~~v~~~~~~~~~~~l~sg~~------dg~i~vwd~~~~~----~~~~---~~~h~ 352 (464)
T 3v7d_B 290 NTLIVWDVAQMKCLYILSG---HT-DRIYSTIYDHERKRCISASM------DTTIRIWDLENGE----LMYT---LQGHT 352 (464)
T ss_dssp SCEEEEETTTTEEEEEECC---CS-SCEEEEEEETTTTEEEEEET------TSCEEEEETTTTE----EEEE---ECCCS
T ss_pred CeEEEEECCCCcEEEEecC---CC-CCEEEEEEcCCCCEEEEEeC------CCcEEEEECCCCc----EEEE---EeCCC
Confidence 3688899887654333211 11 112223333 3455666664 3569999998753 2221 11122
Q ss_pred cccEEEEeCCcEEEEEcCCCCCCCCCcEEEEECCCCCcEEEEccCCCCCCCCcceeEEEEEeCCeEEEecCCCCCCCCcc
Q 002047 229 YGHVMALVGQRYLMAIGGNDGKRPLADVWALDTAAKPYEWRKLEPEGEGPPPCMYATASARSDGLLLLCGGRDASSVPLA 308 (975)
Q Consensus 229 ~~h~~~~~~~~~lyV~GG~~g~~~~ndv~~yDl~s~~~~W~~v~~~~~~P~~r~~~~a~~~~~g~lyvfGG~~~~~~~l~ 308 (975)
..-..+.+.+ ..++.|+.++ .+..||+.+....+... .. ......+...++.+++.|+ ++
T Consensus 353 ~~v~~~~~~~-~~l~s~s~dg-----~v~vwd~~~~~~~~~~~--~~-----~~~~~~~~~~~~~~l~~~~-dg------ 412 (464)
T 3v7d_B 353 ALVGLLRLSD-KFLVSAAADG-----SIRGWDANDYSRKFSYH--HT-----NLSAITTFYVSDNILVSGS-EN------ 412 (464)
T ss_dssp SCEEEEEECS-SEEEEEETTS-----EEEEEETTTCCEEEEEE--CT-----TCCCEEEEEECSSEEEEEE-TT------
T ss_pred CcEEEEEEcC-CEEEEEeCCC-----cEEEEECCCCceeeeec--CC-----CCccEEEEEeCCCEEEEec-CC------
Confidence 2234445555 5667777664 58889998763233221 11 1223344455777777776 22
Q ss_pred ceEEeecCCCCeEEEEECCCCCCCCcceeeEEEeCCEEEEEcCcCCCCCccccCCcEEEEEC
Q 002047 309 SAYGLAKHRDGRWEWAIAPGVSPSPRYQHAAVFVNARLHVSGGALGGGRMVEDSSSVAVLDT 370 (975)
Q Consensus 309 d~~~~~~~~~~~W~w~~~~g~~P~~R~~hs~v~~~~~L~V~GG~~~~~~~~~~~~dv~~yD~ 370 (975)
.+..++..+. + .....- .+....-.++++.++.+++.|+.++ ..-++++|.
T Consensus 413 ~i~iwd~~~g-~--~~~~~~-~~~~~~v~~v~~~~~~l~~~~~~~g-------~~~i~~ldf 463 (464)
T 3v7d_B 413 QFNIYNLRSG-K--LVHANI-LKDADQIWSVNFKGKTLVAAVEKDG-------QSFLEILDF 463 (464)
T ss_dssp EEEEEETTTC-C--EEESCT-TTTCSEEEEEEEETTEEEEEEEETT-------EEEEEEEEC
T ss_pred eEEEEECCCC-c--EEehhh-ccCCCcEEEEEecCCEEEEEEEeCC-------eEEEEEeec
Confidence 2444443333 2 222111 1122223344455666666665433 223677775
No 131
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=85.50 E-value=39 Score=35.53 Aligned_cols=110 Identities=6% Similarity=-0.060 Sum_probs=57.8
Q ss_pred CcEEEEECCCCcEEEecCCCCCCCCccceEEEEe-CCEEEEEeccCCCCCccccEEEEEcCCCCCcEEEEEecCCCCCCC
Q 002047 150 ADVHCYDVLTNKWSRITPFGEPPTPRAAHVATAV-GTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGPR 228 (975)
Q Consensus 150 ~dv~~yD~~t~~W~~l~~~g~~P~pR~~hsa~~~-~~~iyv~GG~~~~~~~~~dv~~yD~~t~~~~W~~v~~~g~~P~~R 228 (975)
..+++||+.+.++..+... ....-++++.. ++++|+...... .....+++||+.+.. ...+.. ......
T Consensus 66 ~~i~~~d~~~~~~~~~~~~----~~~~~~~i~~~~dg~l~v~~~~~~--~~~~~i~~~d~~~~~--~~~~~~--~~~~~~ 135 (333)
T 2dg1_A 66 GNIFKINPETKEIKRPFVS----HKANPAAIKIHKDGRLFVCYLGDF--KSTGGIFAATENGDN--LQDIIE--DLSTAY 135 (333)
T ss_dssp CEEEEECTTTCCEEEEEEC----SSSSEEEEEECTTSCEEEEECTTS--SSCCEEEEECTTSCS--CEEEEC--SSSSCC
T ss_pred CEEEEEeCCCCcEEEEeeC----CCCCcceEEECCCCcEEEEeCCCC--CCCceEEEEeCCCCE--EEEEEc--cCccCC
Confidence 3689999998888776421 11223344443 457777653211 112479999988763 332221 111122
Q ss_pred cccEEEEeCCcEEEEEcCCC-CCCCCCcEEEEECCCCCcEEEEc
Q 002047 229 YGHVMALVGQRYLMAIGGND-GKRPLADVWALDTAAKPYEWRKL 271 (975)
Q Consensus 229 ~~h~~~~~~~~~lyV~GG~~-g~~~~ndv~~yDl~s~~~~W~~v 271 (975)
.-..+++..++.+|+..... .......+|+||+.+. +...+
T Consensus 136 ~~~~i~~d~~g~l~v~~~~~~~~~~~~~l~~~~~~~~--~~~~~ 177 (333)
T 2dg1_A 136 CIDDMVFDSKGGFYFTDFRGYSTNPLGGVYYVSPDFR--TVTPI 177 (333)
T ss_dssp CEEEEEECTTSCEEEEECCCBTTBCCEEEEEECTTSC--CEEEE
T ss_pred cccceEECCCCCEEEEeccccccCCCceEEEEeCCCC--EEEEe
Confidence 22233344444688754321 1122457999999876 44443
No 132
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=85.48 E-value=65 Score=38.05 Aligned_cols=83 Identities=8% Similarity=-0.003 Sum_probs=46.5
Q ss_pred CCEEEEEeccC---------CCCCccccEEEEEcCCCCCcEEEEEecCCCCC--CCcccEEEEe---CCc--EEEEEcCC
Q 002047 184 GTMVVIQGGIG---------PAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPG--PRYGHVMALV---GQR--YLMAIGGN 247 (975)
Q Consensus 184 ~~~iyv~GG~~---------~~~~~~~dv~~yD~~t~~~~W~~v~~~g~~P~--~R~~h~~~~~---~~~--~lyV~GG~ 247 (975)
.+.||+.-|.. ....+.+.++.+|+.+...+|+.-......-. .-.....+-. +++ .+++.+..
T Consensus 252 ~g~vy~g~g~~~p~~~~~r~gd~~y~~sv~Ald~~TG~~~W~~q~~~~d~wd~d~~~~p~l~d~~~~~G~~~~~v~~~~~ 331 (599)
T 1w6s_A 252 TNLIYFGTGNPAPWNETMRPGDNKWTMTIFGRDADTGEAKFGYQKTPHDEWDYAGVNVMMLSEQKDKDGKARKLLTHPDR 331 (599)
T ss_dssp TTEEEEECCCCSCSCGGGSCSCCTTSSEEEEEETTTCCEEEEEESSTTCSSCCCCCCCCEEEEEECTTSCEEEEEEEECT
T ss_pred CCEEEEeCCCCccccCcccCCCccccceEEEEeCCCCceeeEeecCCCccccccCCCccEEEeccccCCcEEEEEEEECC
Confidence 45777765532 12234568999999998778986532111100 0011122221 221 45665554
Q ss_pred CCCCCCCcEEEEECCCCCcEEEEc
Q 002047 248 DGKRPLADVWALDTAAKPYEWRKL 271 (975)
Q Consensus 248 ~g~~~~ndv~~yDl~s~~~~W~~v 271 (975)
++ .++++|..+....|..-
T Consensus 332 ~G-----~l~~lD~~tG~~lw~~~ 350 (599)
T 1w6s_A 332 NG-----IVYTLDRTDGALVSANK 350 (599)
T ss_dssp TS-----EEEEEETTTCCEEEEEE
T ss_pred Cc-----EEEEEECCCCCEeeccc
Confidence 43 68999998887788653
No 133
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=85.24 E-value=40 Score=35.42 Aligned_cols=136 Identities=10% Similarity=0.073 Sum_probs=60.4
Q ss_pred CcEEEEECCCCcEEEecCCCCCCCCccceEEEEe-CCEEEEEeccCCCCCccccEEEEEcCCCCCc--EEEEEecC----
Q 002047 150 ADVHCYDVLTNKWSRITPFGEPPTPRAAHVATAV-GTMVVIQGGIGPAGLSAEDLHVLDLTQQRPR--WHRVVVQG---- 222 (975)
Q Consensus 150 ~dv~~yD~~t~~W~~l~~~g~~P~pR~~hsa~~~-~~~iyv~GG~~~~~~~~~dv~~yD~~t~~~~--W~~v~~~g---- 222 (975)
..+..||+.+.+....... +. .-.+++.. ++..++.++.. .......+.+||+.+.... +.......
T Consensus 96 g~i~iwd~~~~~~~~~~~~---~~--~v~~~~~~~~~~~l~~~~~~-~~~~~g~i~~~d~~~~~~~~~~~~~~~~~~~~~ 169 (369)
T 3zwl_B 96 YSIKLWDVSNGQCVATWKS---PV--PVKRVEFSPCGNYFLAILDN-VMKNPGSINIYEIERDSATHELTKVSEEPIHKI 169 (369)
T ss_dssp TEEEEEETTTCCEEEEEEC---SS--CEEEEEECTTSSEEEEEECC-BTTBCCEEEEEEEEECTTTCCEEEECSSCSEEE
T ss_pred CeEEEEECCCCcEEEEeec---CC--CeEEEEEccCCCEEEEecCC-ccCCCCEEEEEEecCCccceeecccccceeeec
Confidence 3688899887765444322 11 11222222 34555555432 1112357888887654211 22111000
Q ss_pred -CCCCCCcccEEEEeCCcEEEEEcCCCCCCCCCcEEEEECCCCCcEEEEccCCCCCCCCcceeEEEEEeCCeEEEecCCC
Q 002047 223 -PGPGPRYGHVMALVGQRYLMAIGGNDGKRPLADVWALDTAAKPYEWRKLEPEGEGPPPCMYATASARSDGLLLLCGGRD 301 (975)
Q Consensus 223 -~~P~~R~~h~~~~~~~~~lyV~GG~~g~~~~ndv~~yDl~s~~~~W~~v~~~~~~P~~r~~~~a~~~~~g~lyvfGG~~ 301 (975)
.......-.+++...++.+++.|+.++ .+..||+.+..-....+..... .........++.+++.|+.+
T Consensus 170 ~~~~~~~~~~~~~~~~~~~~l~~~~~dg-----~i~i~d~~~~~~~~~~~~~~~~-----~v~~~~~~~~~~~l~~~~~d 239 (369)
T 3zwl_B 170 ITHEGLDAATVAGWSTKGKYIIAGHKDG-----KISKYDVSNNYEYVDSIDLHEK-----SISDMQFSPDLTYFITSSRD 239 (369)
T ss_dssp ECCTTCCCEEEEEECGGGCEEEEEETTS-----EEEEEETTTTTEEEEEEECCSS-----CEEEEEECTTSSEEEEEETT
T ss_pred cCCcCccceeEEEEcCCCCEEEEEcCCC-----EEEEEECCCCcEeEEEEecCCC-----ceeEEEECCCCCEEEEecCC
Confidence 000000122222223335666676554 6899999872112222222111 22223333466777777654
No 134
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=85.13 E-value=19 Score=43.55 Aligned_cols=182 Identities=10% Similarity=0.039 Sum_probs=86.7
Q ss_pred CcEEEEECCCCcEEEecCCCCCCCCccceEEEEe-CCEEEEEeccCCCCCccccEEEEEcCCCCCcEEEEEecCCCCCCC
Q 002047 150 ADVHCYDVLTNKWSRITPFGEPPTPRAAHVATAV-GTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGPR 228 (975)
Q Consensus 150 ~dv~~yD~~t~~W~~l~~~g~~P~pR~~hsa~~~-~~~iyv~GG~~~~~~~~~dv~~yD~~t~~~~W~~v~~~g~~P~~R 228 (975)
..+.+||..++.....-.. ....-.+++.. ++..++.|+. ...+.+||+.+. |........ ...
T Consensus 77 g~i~vw~~~~~~~~~~~~~----~~~~v~~~~~s~~~~~l~~~~~------dg~i~vw~~~~~---~~~~~~~~~--~~~ 141 (814)
T 3mkq_A 77 FRIRVFNYNTGEKVVDFEA----HPDYIRSIAVHPTKPYVLSGSD------DLTVKLWNWENN---WALEQTFEG--HEH 141 (814)
T ss_dssp SEEEEEETTTCCEEEEEEC----CSSCEEEEEECSSSSEEEEEET------TSEEEEEEGGGT---SEEEEEEEC--CSS
T ss_pred CeEEEEECCCCcEEEEEec----CCCCEEEEEEeCCCCEEEEEcC------CCEEEEEECCCC---ceEEEEEcC--CCC
Confidence 3688899888776443221 11111222222 3445556653 346889999875 333321111 111
Q ss_pred cccEEEEeC-CcEEEEEcCCCCCCCCCcEEEEECCCCCcEEEEccCCCCCCCCcceeEEEEEe--CCeEEEecCCCCCCC
Q 002047 229 YGHVMALVG-QRYLMAIGGNDGKRPLADVWALDTAAKPYEWRKLEPEGEGPPPCMYATASARS--DGLLLLCGGRDASSV 305 (975)
Q Consensus 229 ~~h~~~~~~-~~~lyV~GG~~g~~~~ndv~~yDl~s~~~~W~~v~~~~~~P~~r~~~~a~~~~--~g~lyvfGG~~~~~~ 305 (975)
.-.+++... ++.+++.|+.++ .+..||+.+....+........ ......... ++.+++.|+.++
T Consensus 142 ~v~~~~~~p~~~~~l~~~~~dg-----~v~vwd~~~~~~~~~~~~~~~~-----~v~~~~~~~~~~~~~l~~~~~dg--- 208 (814)
T 3mkq_A 142 FVMCVAFNPKDPSTFASGCLDR-----TVKVWSLGQSTPNFTLTTGQER-----GVNYVDYYPLPDKPYMITASDDL--- 208 (814)
T ss_dssp CEEEEEEETTEEEEEEEEETTS-----EEEEEETTCSSCSEEEECCCTT-----CCCEEEECCSTTCCEEEEECTTS---
T ss_pred cEEEEEEEcCCCCEEEEEeCCC-----eEEEEECCCCcceeEEecCCCC-----CEEEEEEEECCCCCEEEEEeCCC---
Confidence 112233333 446777777664 6889998765333333322111 111222222 677777777543
Q ss_pred CccceEEeecCCCCeEEEEECCCCCCCCcceeeEEEe-CCEEEEEcCcCCCCCccccCCcEEEEECCCCeEE
Q 002047 306 PLASAYGLAKHRDGRWEWAIAPGVSPSPRYQHAAVFV-NARLHVSGGALGGGRMVEDSSSVAVLDTAAGVWC 376 (975)
Q Consensus 306 ~l~d~~~~~~~~~~~W~w~~~~g~~P~~R~~hs~v~~-~~~L~V~GG~~~~~~~~~~~~dv~~yD~~t~~W~ 376 (975)
.+..++.... .-.... .+ ....-.++++. ++.+++.|+.++ .|.+||+.+.+-.
T Consensus 209 ---~i~~~d~~~~-~~~~~~-~~---~~~~v~~~~~~~~~~~l~~~~~dg---------~v~vwd~~~~~~~ 263 (814)
T 3mkq_A 209 ---TIKIWDYQTK-SCVATL-EG---HMSNVSFAVFHPTLPIIISGSEDG---------TLKIWNSSTYKVE 263 (814)
T ss_dssp ---EEEEEETTTT-EEEEEE-EC---CSSCEEEEEECSSSSEEEEEETTS---------CEEEEETTTCSEE
T ss_pred ---EEEEEECCCC-cEEEEE-cC---CCCCEEEEEEcCCCCEEEEEeCCC---------eEEEEECCCCcEE
Confidence 2344433322 211111 11 11111222233 456777777533 3788888876543
No 135
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=85.09 E-value=20 Score=43.12 Aligned_cols=130 Identities=15% Similarity=0.140 Sum_probs=71.6
Q ss_pred EEEeCCEEEEEeccCCCCCccccEEEEEcCCCCCcEEEEEecCC--CCCC---CcccEEEEeCCcEEEEEcCCCCCCCCC
Q 002047 180 ATAVGTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGP--GPGP---RYGHVMALVGQRYLMAIGGNDGKRPLA 254 (975)
Q Consensus 180 a~~~~~~iyv~GG~~~~~~~~~dv~~yD~~t~~~~W~~v~~~g~--~P~~---R~~h~~~~~~~~~lyV~GG~~g~~~~n 254 (975)
-++.++.||+... .+.++.+|..+....|+.-..... .+.. ....+.++.++ .||+... -.
T Consensus 73 P~v~~g~vyv~~~-------~~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~a~~~~-~v~v~~~------dg 138 (677)
T 1kb0_A 73 PVVVDGIMYVSAS-------WSVVHAIDTRTGNRIWTYDPQIDRSTGFKGCCDVVNRGVALWKG-KVYVGAW------DG 138 (677)
T ss_dssp CEEETTEEEEECG-------GGCEEEEETTTTEEEEEECCCCCGGGGGGSSSCSCCCCCEEETT-EEEEECT------TS
T ss_pred CEEECCEEEEECC-------CCeEEEEECCCCcEEEEEcCCCCccccccccccCCCCCceEECC-EEEEEcC------CC
Confidence 3557889998865 357999999987667986541110 0000 11123444555 7887532 24
Q ss_pred cEEEEECCCCCcEEEEccCCCCCCCCcceeEEEEEeCCeEEEecCCCCCCCCccceEEeecCCC-CeEEEEE
Q 002047 255 DVWALDTAAKPYEWRKLEPEGEGPPPCMYATASARSDGLLLLCGGRDASSVPLASAYGLAKHRD-GRWEWAI 325 (975)
Q Consensus 255 dv~~yDl~s~~~~W~~v~~~~~~P~~r~~~~a~~~~~g~lyvfGG~~~~~~~l~d~~~~~~~~~-~~W~w~~ 325 (975)
.++.+|..+....|+.-..... +.......+-++.++++|+..+... ...-..++.|+..+. ..|++..
T Consensus 139 ~l~alD~~tG~~~W~~~~~~~~-~~~~~~~~~p~v~~~~v~v~~~~~~-~~~~g~v~a~D~~tG~~~W~~~~ 208 (677)
T 1kb0_A 139 RLIALDAATGKEVWHQNTFEGQ-KGSLTITGAPRVFKGKVIIGNGGAE-YGVRGYITAYDAETGERKWRWFS 208 (677)
T ss_dssp EEEEEETTTCCEEEEEETTTTC-CSSCBCCSCCEEETTEEEECCBCTT-TCCBCEEEEEETTTCCEEEEEES
T ss_pred EEEEEECCCCCEEeeecCCcCc-CcCcccccCcEEECCEEEEEecccc-cCCCCEEEEEECCCCcEEEEecc
Confidence 6999999998889987543110 0111122233456888877544222 112345677765432 2455443
No 136
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=85.05 E-value=49 Score=36.40 Aligned_cols=94 Identities=18% Similarity=0.157 Sum_probs=46.8
Q ss_pred CcEEEEECCCCcEEEecCCCCCCCCccceEEEEeCCEEEEEeccCCCCCccccEEEEEcCCCCCcEEEEEecCCCCCCCc
Q 002047 150 ADVHCYDVLTNKWSRITPFGEPPTPRAAHVATAVGTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGPRY 229 (975)
Q Consensus 150 ~dv~~yD~~t~~W~~l~~~g~~P~pR~~hsa~~~~~~iyv~GG~~~~~~~~~dv~~yD~~t~~~~W~~v~~~g~~P~~R~ 229 (975)
..+.+||+.+.+-...... ... ...+...++.+++.|+. ...++++|.......-..+. +. ...
T Consensus 169 g~v~iWd~~~~~~~~~~~~---h~~--~v~~~s~~~~~l~sgs~------d~~i~~~d~~~~~~~~~~~~--~h---~~~ 232 (420)
T 4gga_A 169 AEVQLWDVQQQKRLRNMTS---HSA--RVGSLSWNSYILSSGSR------SGHIHHHDVRVAEHHVATLS--GH---SQE 232 (420)
T ss_dssp SCEEEEETTTTEEEEEECC---CSS--CEEEEEEETTEEEEEET------TSEEEEEETTSSSCEEEEEE--CC---SSC
T ss_pred CeEEEEEcCCCcEEEEEeC---CCC--ceEEEeeCCCEEEEEeC------CCceeEeeecccceeeEEec--cc---ccc
Confidence 4688899888764333221 111 22334445666777764 35678888776531112221 11 111
Q ss_pred ccEEEEeCCcEEEEEcCCCCCCCCCcEEEEECCCC
Q 002047 230 GHVMALVGQRYLMAIGGNDGKRPLADVWALDTAAK 264 (975)
Q Consensus 230 ~h~~~~~~~~~lyV~GG~~g~~~~ndv~~yDl~s~ 264 (975)
-.......++..++.|+.++ .+..+|..+.
T Consensus 233 ~~~~~~~~~g~~l~s~~~D~-----~v~i~~~~~~ 262 (420)
T 4gga_A 233 VCGLRWAPDGRHLASGGNDN-----LVNVWPSAPG 262 (420)
T ss_dssp EEEEEECTTSSEEEEEETTS-----CEEEEESSCC
T ss_pred eeeeeecCCCCeeeeeeccc-----cceEEeeccc
Confidence 11222222335666666554 4667777654
No 137
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=84.97 E-value=49 Score=40.17 Aligned_cols=188 Identities=11% Similarity=0.007 Sum_probs=98.5
Q ss_pred CcEEEEECCCCcEEEecCCCCCCCCccceEEEEe-CCEEEEEeccCCCCCccccEEEEEcCCCCCcEEEEEecC--CCCC
Q 002047 150 ADVHCYDVLTNKWSRITPFGEPPTPRAAHVATAV-GTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQG--PGPG 226 (975)
Q Consensus 150 ~dv~~yD~~t~~W~~l~~~g~~P~pR~~hsa~~~-~~~iyv~GG~~~~~~~~~dv~~yD~~t~~~~W~~v~~~g--~~P~ 226 (975)
.-+++||+.+.+++.+...+ .....-.+++.. ++.|++... .-+++||..+.. |....... .++.
T Consensus 427 ~Gl~~~~~~~~~~~~~~~~~--~~~~~v~~i~~d~~g~lwigt~--------~Gl~~~~~~~~~--~~~~~~~~~~~~~~ 494 (781)
T 3v9f_A 427 GNISYYNTRLKKFQIIELEK--NELLDVRVFYEDKNKKIWIGTH--------AGVFVIDLASKK--VIHHYDTSNSQLLE 494 (781)
T ss_dssp EEEEEECSSSCEEEECCSTT--TCCCCEEEEEECTTSEEEEEET--------TEEEEEESSSSS--CCEEECTTTSSCSC
T ss_pred CCEEEEcCCCCcEEEeccCC--CCCCeEEEEEECCCCCEEEEEC--------CceEEEeCCCCe--EEecccCccccccc
Confidence 57888999888888875321 111222333333 347766421 358999998764 66654221 1111
Q ss_pred CCcccEEEEeCCcEEEEEcCCCCCCCCCcEEEEECCCCCcEEEEccCCCCCCCCcceeEEEEEeCCeEEEecCCCCCCCC
Q 002047 227 PRYGHVMALVGQRYLMAIGGNDGKRPLADVWALDTAAKPYEWRKLEPEGEGPPPCMYATASARSDGLLLLCGGRDASSVP 306 (975)
Q Consensus 227 ~R~~h~~~~~~~~~lyV~GG~~g~~~~ndv~~yDl~s~~~~W~~v~~~~~~P~~r~~~~a~~~~~g~lyvfGG~~~~~~~ 306 (975)
. .-.+++.-.++.||+..-. .-+++||+.+. +|+........|.. ...+.+.-.++.||+...
T Consensus 495 ~-~i~~i~~d~~g~lWigt~~------~Gl~~~~~~~~--~~~~~~~~~~l~~~-~i~~i~~d~~g~lWi~T~------- 557 (781)
T 3v9f_A 495 N-FVRSIAQDSEGRFWIGTFG------GGVGIYTPDMQ--LVRKFNQYEGFCSN-TINQIYRSSKGQMWLATG------- 557 (781)
T ss_dssp S-CEEEEEECTTCCEEEEESS------SCEEEECTTCC--EEEEECTTTTCSCS-CEEEEEECTTSCEEEEET-------
T ss_pred c-eeEEEEEcCCCCEEEEEcC------CCEEEEeCCCC--eEEEccCCCCCCCC-eeEEEEECCCCCEEEEEC-------
Confidence 1 1123333334467775321 24899999988 88776543222211 112222224678888532
Q ss_pred ccce-EEeecCCCCeEEEEECCCCCCCCcceeeEEEe-CCEEEEEcCcCCCCCccccCCcEEEEECCCCeEEEccc
Q 002047 307 LASA-YGLAKHRDGRWEWAIAPGVSPSPRYQHAAVFV-NARLHVSGGALGGGRMVEDSSSVAVLDTAAGVWCDTKS 380 (975)
Q Consensus 307 l~d~-~~~~~~~~~~W~w~~~~g~~P~~R~~hs~v~~-~~~L~V~GG~~~~~~~~~~~~dv~~yD~~t~~W~~v~~ 380 (975)
.-+ +.|+.... ++.......-.|.... .+++.- ++.||+.+. +.+.+||+++.++.....
T Consensus 558 -~Glv~~~d~~~~-~~~~~~~~~gl~~~~i-~~i~~d~~g~lW~~t~-----------~Gl~~~~~~~~~~~~~~~ 619 (781)
T 3v9f_A 558 -EGLVCFPSARNF-DYQVFQRKEGLPNTHI-RAISEDKNGNIWASTN-----------TGISCYITSKKCFYTYDH 619 (781)
T ss_dssp -TEEEEESCTTTC-CCEEECGGGTCSCCCC-CEEEECSSSCEEEECS-----------SCEEEEETTTTEEEEECG
T ss_pred -CCceEEECCCCC-cEEEccccCCCCCceE-EEEEECCCCCEEEEcC-----------CceEEEECCCCceEEecc
Confidence 123 55554433 4443332211222222 333333 467877531 238899999999887654
No 138
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=84.88 E-value=30 Score=41.19 Aligned_cols=160 Identities=12% Similarity=0.029 Sum_probs=72.4
Q ss_pred cccEEEEEcCCCCCcEEEEEecCCCCCCCcccEEEEeCCcEEEEEcCCCCCCCCCcEEEEECCCCCcEEEEccCCCCCCC
Q 002047 200 AEDLHVLDLTQQRPRWHRVVVQGPGPGPRYGHVMALVGQRYLMAIGGNDGKRPLADVWALDTAAKPYEWRKLEPEGEGPP 279 (975)
Q Consensus 200 ~~dv~~yD~~t~~~~W~~v~~~g~~P~~R~~h~~~~~~~~~lyV~GG~~g~~~~ndv~~yDl~s~~~~W~~v~~~~~~P~ 279 (975)
...++++|+.+.. -..+.. + .....+-..++...+++.++++..+.......++.+|+.+.. .+..+........
T Consensus 234 ~~~l~~~d~~~~~--~~~~~~-~-~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~v~~~d~~~g~-~~~~~~~~~~~~~ 308 (706)
T 2z3z_A 234 HVTVGIYHLATGK--TVYLQT-G-EPKEKFLTNLSWSPDENILYVAEVNRAQNECKVNAYDAETGR-FVRTLFVETDKHY 308 (706)
T ss_dssp EEEEEEEETTTTE--EEECCC-C-SCTTCEEEEEEECTTSSEEEEEEECTTSCEEEEEEEETTTCC-EEEEEEEEECSSC
T ss_pred eeEEEEEECCCCc--eEeecc-C-CCCceeEeeEEEECCCCEEEEEEeCCCCCeeEEEEEECCCCc-eeeEEEEccCCCe
Confidence 4679999998753 333221 0 011122222333333344444444433345689999997751 3333321111000
Q ss_pred CcceeEEEEEe--CCeEEEecCCCCCCCCccceEEeecCCCCeEEEEECCCCCCCCcceee-EEEe-C-CEEEEEcCcCC
Q 002047 280 PCMYATASARS--DGLLLLCGGRDASSVPLASAYGLAKHRDGRWEWAIAPGVSPSPRYQHA-AVFV-N-ARLHVSGGALG 354 (975)
Q Consensus 280 ~r~~~~a~~~~--~g~lyvfGG~~~~~~~l~d~~~~~~~~~~~W~w~~~~g~~P~~R~~hs-~v~~-~-~~L~V~GG~~~ 354 (975)
........... ++++++.+..++ ...+|.++.... . ...+... ...... .++. + ..||+.+..++
T Consensus 309 ~~~~~~~~~sp~~dg~~l~~~~~~g----~~~l~~~~~~~~-~--~~~l~~~---~~~v~~~~~~spdg~~l~~~~~~~~ 378 (706)
T 2z3z_A 309 VEPLHPLTFLPGSNNQFIWQSRRDG----WNHLYLYDTTGR-L--IRQVTKG---EWEVTNFAGFDPKGTRLYFESTEAS 378 (706)
T ss_dssp CCCCSCCEECTTCSSEEEEEECTTS----SCEEEEEETTSC-E--EEECCCS---SSCEEEEEEECTTSSEEEEEESSSC
T ss_pred ECccCCceeecCCCCEEEEEEccCC----ccEEEEEECCCC-E--EEecCCC---CeEEEeeeEEcCCCCEEEEEecCCC
Confidence 00011223334 677666665443 355777763322 2 2233221 111112 2222 3 45666554322
Q ss_pred CCCccccCCcEEEEECCCCeEEEcc
Q 002047 355 GGRMVEDSSSVAVLDTAAGVWCDTK 379 (975)
Q Consensus 355 ~~~~~~~~~dv~~yD~~t~~W~~v~ 379 (975)
.. ...||.+|+.+.....+.
T Consensus 379 ~~-----~~~l~~~d~~~~~~~~l~ 398 (706)
T 2z3z_A 379 PL-----ERHFYCIDIKGGKTKDLT 398 (706)
T ss_dssp TT-----CBEEEEEETTCCCCEESC
T ss_pred Cc-----eEEEEEEEcCCCCceecc
Confidence 11 346999999888755543
No 139
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=84.88 E-value=16 Score=39.40 Aligned_cols=201 Identities=10% Similarity=-0.033 Sum_probs=92.7
Q ss_pred CcEEEEECCCCcEEEecCCCCCCCCccceEEEEeCC-EEEEEeccCCCCCccccEEEEEcCCCCCcEEEEEecCCCCCCC
Q 002047 150 ADVHCYDVLTNKWSRITPFGEPPTPRAAHVATAVGT-MVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGPR 228 (975)
Q Consensus 150 ~dv~~yD~~t~~W~~l~~~g~~P~pR~~hsa~~~~~-~iyv~GG~~~~~~~~~dv~~yD~~t~~~~W~~v~~~g~~P~~R 228 (975)
..+|.+|+.+.....+... +.......+..-++ .|++... ..+++++|+.+.. -..+. ..|...
T Consensus 60 ~~l~~~d~~~g~~~~lt~~---~~~~~~~~~~spdg~~l~~~~~-------~~~l~~~d~~~g~--~~~~~---~~~~~~ 124 (388)
T 3pe7_A 60 WNYYLLDLNTQVATQLTEG---RGDNTFGGFLSPDDDALFYVKD-------GRNLMRVDLATLE--ENVVY---QVPAEW 124 (388)
T ss_dssp CEEEEEETTTCEEEECCCS---SCBCSSSCEECTTSSEEEEEET-------TTEEEEEETTTCC--EEEEE---ECCTTE
T ss_pred ceEEEEeCCCCceEEeeeC---CCCCccceEEcCCCCEEEEEeC-------CCeEEEEECCCCc--ceeee---echhhc
Confidence 3799999999988887643 22111112223344 4544432 1479999998864 33333 223322
Q ss_pred cccEEEE-eCCcEEEEEcCCC-----------------CCCCCCcEEEEECCCCCcEEEEccCCCCCCCCcceeEEEEEe
Q 002047 229 YGHVMAL-VGQRYLMAIGGND-----------------GKRPLADVWALDTAAKPYEWRKLEPEGEGPPPCMYATASARS 290 (975)
Q Consensus 229 ~~h~~~~-~~~~~lyV~GG~~-----------------g~~~~ndv~~yDl~s~~~~W~~v~~~~~~P~~r~~~~a~~~~ 290 (975)
....... -.++.+++.--.. .......++++|+.+. +-..+..... .........
T Consensus 125 ~~~~~~~~~~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~~g--~~~~l~~~~~-----~~~~~~~sp 197 (388)
T 3pe7_A 125 VGYGTWVANSDCTKLVGIEIRREDWVPLTDWKKFHEFYFTKPCCRLMRVDLKTG--ESTVILQENQ-----WLGHPIYRP 197 (388)
T ss_dssp EEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHGGGCCCEEEEEEETTTC--CEEEEEEESS-----CEEEEEEET
T ss_pred ccccceeECCCCCeeccccccCcccccccccchhhhhhccCCcceEEEEECCCC--ceEEeecCCc-----cccccEECC
Confidence 2212111 1222232210000 0112368999999887 5444432211 223333444
Q ss_pred -CCeEEEecCCCCCCCCccceEEeecCCCCeEEEEECCCCCCCCcceeeEEEe-CCE-EEEEcCcCCCCCccccCCcEEE
Q 002047 291 -DGLLLLCGGRDASSVPLASAYGLAKHRDGRWEWAIAPGVSPSPRYQHAAVFV-NAR-LHVSGGALGGGRMVEDSSSVAV 367 (975)
Q Consensus 291 -~g~lyvfGG~~~~~~~l~d~~~~~~~~~~~W~w~~~~g~~P~~R~~hs~v~~-~~~-L~V~GG~~~~~~~~~~~~dv~~ 367 (975)
+++.++|............+|.++.... . ...+.... ........++. +++ |+......+. . ...|++
T Consensus 198 ~dg~~l~~~~~~~~~~~~~~l~~~d~~~~-~--~~~l~~~~-~~~~~~~~~~spdg~~l~~~~~~~~~-~----~~~l~~ 268 (388)
T 3pe7_A 198 YDDSTVAFCHEGPHDLVDARMWLINEDGT-N--MRKVKTHA-EGESCTHEFWVPDGSALVYVSYLKGS-P----DRFIYS 268 (388)
T ss_dssp TEEEEEEEEECSCTTTSSCSEEEEETTSC-C--CEESCCCC-TTEEEEEEEECTTSSCEEEEEEETTC-C----CEEEEE
T ss_pred CCCCEEEEEEecCCCCCcceEEEEeCCCC-c--eEEeeeCC-CCcccccceECCCCCEEEEEecCCCC-C----cceEEE
Confidence 5555444333222222456777765433 1 12222111 11111122222 444 4333222111 0 124999
Q ss_pred EECCCCeEEEcccC
Q 002047 368 LDTAAGVWCDTKSV 381 (975)
Q Consensus 368 yD~~t~~W~~v~~~ 381 (975)
+|+++.+-..+...
T Consensus 269 ~d~~~g~~~~l~~~ 282 (388)
T 3pe7_A 269 ADPETLENRQLTSM 282 (388)
T ss_dssp ECTTTCCEEEEEEE
T ss_pred EecCCCceEEEEcC
Confidence 99999987666544
No 140
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=84.11 E-value=31 Score=35.42 Aligned_cols=176 Identities=7% Similarity=-0.023 Sum_probs=79.6
Q ss_pred cEEEEECCCCcEEEecCCCCCCCCccceEEEEe-CCEEEEEeccCCCCCccccEEEEEcCCCCCcEEEEEecCCCCCCCc
Q 002047 151 DVHCYDVLTNKWSRITPFGEPPTPRAAHVATAV-GTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGPRY 229 (975)
Q Consensus 151 dv~~yD~~t~~W~~l~~~g~~P~pR~~hsa~~~-~~~iyv~GG~~~~~~~~~dv~~yD~~t~~~~W~~v~~~g~~P~~R~ 229 (975)
.+..||+.+..-...... . ...-.+++.. ++.+++.|+. ...+.+|++.... ....+. .+.....
T Consensus 40 ~v~vw~~~~~~~~~~~~~---~-~~~v~~~~~~~~~~~l~~~~~------dg~i~~~~~~~~~-~~~~~~---~~~~~~~ 105 (313)
T 3odt_A 40 TVRLWSKDDQWLGTVVYT---G-QGFLNSVCYDSEKELLLFGGK------DTMINGVPLFATS-GEDPLY---TLIGHQG 105 (313)
T ss_dssp EEEEEEESSSEEEEEEEE---C-SSCEEEEEEETTTTEEEEEET------TSCEEEEETTCCT-TSCC-C---EECCCSS
T ss_pred cEEEEECCCCEEEEEeec---C-CccEEEEEECCCCCEEEEecC------CCeEEEEEeeecC-CCCccc---chhhccc
Confidence 678888877654433221 1 1112223333 4466666664 2467888876542 111111 1111222
Q ss_pred ccEEEEeCCcEEEEEcCCCCCCCCCcEEEEECCCCCcEEEEccCCCCCCCCcceeEEEEEeCCeEEEecCCCCCCCCccc
Q 002047 230 GHVMALVGQRYLMAIGGNDGKRPLADVWALDTAAKPYEWRKLEPEGEGPPPCMYATASARSDGLLLLCGGRDASSVPLAS 309 (975)
Q Consensus 230 ~h~~~~~~~~~lyV~GG~~g~~~~ndv~~yDl~s~~~~W~~v~~~~~~P~~r~~~~a~~~~~g~lyvfGG~~~~~~~l~d 309 (975)
.-....+.+ .+++.|+.++ .+..||.... .+...... . .....+....++..++.|+.++.
T Consensus 106 ~i~~~~~~~-~~l~~~~~d~-----~i~~~d~~~~--~~~~~~~~-~----~v~~~~~~~~~~~~l~~~~~d~~------ 166 (313)
T 3odt_A 106 NVCSLSFQD-GVVISGSWDK-----TAKVWKEGSL--VYNLQAHN-A----SVWDAKVVSFSENKFLTASADKT------ 166 (313)
T ss_dssp CEEEEEEET-TEEEEEETTS-----EEEEEETTEE--EEEEECCS-S----CEEEEEEEETTTTEEEEEETTSC------
T ss_pred CEEEEEecC-CEEEEEeCCC-----CEEEEcCCcE--EEecccCC-C----ceeEEEEccCCCCEEEEEECCCC------
Confidence 223334455 4666676654 5777883332 33222211 1 12222223326667777775543
Q ss_pred eEEeecCCCCeEEEEECCCCCCCCcceeeEEE-eCCEEEEEcCcCCCCCccccCCcEEEEECCCCeE
Q 002047 310 AYGLAKHRDGRWEWAIAPGVSPSPRYQHAAVF-VNARLHVSGGALGGGRMVEDSSSVAVLDTAAGVW 375 (975)
Q Consensus 310 ~~~~~~~~~~~W~w~~~~g~~P~~R~~hs~v~-~~~~L~V~GG~~~~~~~~~~~~dv~~yD~~t~~W 375 (975)
+..++.. . -. ...... ....-.++++ -++. ++.|+.+ ..+.+||+.+.+-
T Consensus 167 i~i~d~~-~--~~-~~~~~~--~~~~i~~~~~~~~~~-~~~~~~d---------g~i~i~d~~~~~~ 217 (313)
T 3odt_A 167 IKLWQND-K--VI-KTFSGI--HNDVVRHLAVVDDGH-FISCSND---------GLIKLVDMHTGDV 217 (313)
T ss_dssp EEEEETT-E--EE-EEECSS--CSSCEEEEEEEETTE-EEEEETT---------SEEEEEETTTCCE
T ss_pred EEEEecC-c--eE-EEEecc--CcccEEEEEEcCCCe-EEEccCC---------CeEEEEECCchhh
Confidence 3333311 1 11 111111 1122223333 3566 6666643 3488999987653
No 141
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=83.63 E-value=26 Score=38.17 Aligned_cols=96 Identities=11% Similarity=0.021 Sum_probs=49.0
Q ss_pred CCEEEEEeccCCCCCccccEEEEEcCCCCCcEEEEEecCCCCCCCcccEEEEeCCcEEEEEcCCCCCCCCCcEEEEECCC
Q 002047 184 GTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGPRYGHVMALVGQRYLMAIGGNDGKRPLADVWALDTAA 263 (975)
Q Consensus 184 ~~~iyv~GG~~~~~~~~~dv~~yD~~t~~~~W~~v~~~g~~P~~R~~h~~~~~~~~~lyV~GG~~g~~~~ndv~~yDl~s 263 (975)
++.+++.|+. ...+.+||+.+.. ..... ......-.+++...++.+++.|+.++ .+..||+.+
T Consensus 108 ~~~~l~~~~~------dg~i~iwd~~~~~----~~~~~--~~h~~~v~~~~~~~~~~~l~s~s~d~-----~i~iwd~~~ 170 (420)
T 3vl1_A 108 QMRRFILGTT------EGDIKVLDSNFNL----QREID--QAHVSEITKLKFFPSGEALISSSQDM-----QLKIWSVKD 170 (420)
T ss_dssp SSCEEEEEET------TSCEEEECTTSCE----EEEET--TSSSSCEEEEEECTTSSEEEEEETTS-----EEEEEETTT
T ss_pred CCCEEEEEEC------CCCEEEEeCCCcc----eeeec--ccccCccEEEEECCCCCEEEEEeCCC-----eEEEEeCCC
Confidence 4567777764 3568999987642 22211 01112222333333445677777654 688999877
Q ss_pred CCcEEEEccCCCCCCCCcceeEEEEEeCCeEEEecCCCC
Q 002047 264 KPYEWRKLEPEGEGPPPCMYATASARSDGLLLLCGGRDA 302 (975)
Q Consensus 264 ~~~~W~~v~~~~~~P~~r~~~~a~~~~~g~lyvfGG~~~ 302 (975)
...... +.... ..........++.+++.|+.++
T Consensus 171 ~~~~~~-~~~h~-----~~v~~~~~~~~~~~l~s~~~d~ 203 (420)
T 3vl1_A 171 GSNPRT-LIGHR-----ATVTDIAIIDRGRNVLSASLDG 203 (420)
T ss_dssp CCCCEE-EECCS-----SCEEEEEEETTTTEEEEEETTS
T ss_pred CcCceE-EcCCC-----CcEEEEEEcCCCCEEEEEcCCC
Confidence 622211 11111 1122233344677777777654
No 142
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=83.34 E-value=42 Score=34.99 Aligned_cols=18 Identities=17% Similarity=0.130 Sum_probs=13.9
Q ss_pred cEEEEECCCCeEEEcccC
Q 002047 364 SVAVLDTAAGVWCDTKSV 381 (975)
Q Consensus 364 dv~~yD~~t~~W~~v~~~ 381 (975)
.+|.+|+++.++..+...
T Consensus 302 ~v~~~d~~~g~~~~~~~~ 319 (343)
T 1ri6_A 302 SVYEIVGEQGLLHEKGRY 319 (343)
T ss_dssp EEEEEETTTTEEEEEEEE
T ss_pred EEEEEcCCCceeeEcccc
Confidence 366669999999888765
No 143
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=83.32 E-value=17 Score=39.13 Aligned_cols=163 Identities=12% Similarity=0.104 Sum_probs=78.0
Q ss_pred CCEEEEEeccCCCCCccccEEEEEcCCCCCcEEEEEecCCCCCCCcccEEEEeCCcEEEEEcCCCCCCCCCcEEEEECCC
Q 002047 184 GTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGPRYGHVMALVGQRYLMAIGGNDGKRPLADVWALDTAA 263 (975)
Q Consensus 184 ~~~iyv~GG~~~~~~~~~dv~~yD~~t~~~~W~~v~~~g~~P~~R~~h~~~~~~~~~lyV~GG~~g~~~~ndv~~yDl~s 263 (975)
++.+++.||. ...+.+||+.+.. |........ .....-.+++...++.+++.|+.++ .+..+|..+
T Consensus 27 ~g~~las~~~------D~~i~iw~~~~~~--~~~~~~~~~-~h~~~v~~~~~sp~g~~l~s~s~D~-----~v~iw~~~~ 92 (345)
T 3fm0_A 27 AGTLLASCGG------DRRIRIWGTEGDS--WICKSVLSE-GHQRTVRKVAWSPCGNYLASASFDA-----TTCIWKKNQ 92 (345)
T ss_dssp TSSCEEEEET------TSCEEEEEEETTE--EEEEEEECS-SCSSCEEEEEECTTSSEEEEEETTS-----CEEEEEECC
T ss_pred CCCEEEEEcC------CCeEEEEEcCCCc--ceeeeeecc-ccCCcEEEEEECCCCCEEEEEECCC-----cEEEEEccC
Confidence 3466667764 3468888887753 543321100 1111112222223446777777665 466777766
Q ss_pred CCcEEEEccCCCCCCCCcceeEEEEEeCCeEEEecCCCCCCCCccceEEeecCCCCeEEEEECCCCCCCCcceeeEEEe-
Q 002047 264 KPYEWRKLEPEGEGPPPCMYATASARSDGLLLLCGGRDASSVPLASAYGLAKHRDGRWEWAIAPGVSPSPRYQHAAVFV- 342 (975)
Q Consensus 264 ~~~~W~~v~~~~~~P~~r~~~~a~~~~~g~lyvfGG~~~~~~~l~d~~~~~~~~~~~W~w~~~~g~~P~~R~~hs~v~~- 342 (975)
. .+..+...... ...........++.+++.|+.++. -.+|.+. ....+........ ....-.++++.
T Consensus 93 ~--~~~~~~~~~~h--~~~v~~v~~sp~~~~l~s~s~D~~----v~iwd~~--~~~~~~~~~~~~~--h~~~v~~~~~~p 160 (345)
T 3fm0_A 93 D--DFECVTTLEGH--ENEVKSVAWAPSGNLLATCSRDKS----VWVWEVD--EEDEYECVSVLNS--HTQDVKHVVWHP 160 (345)
T ss_dssp C---EEEEEEECCC--SSCEEEEEECTTSSEEEEEETTSC----EEEEEEC--TTSCEEEEEEECC--CCSCEEEEEECS
T ss_pred C--CeEEEEEccCC--CCCceEEEEeCCCCEEEEEECCCe----EEEEECC--CCCCeEEEEEecC--cCCCeEEEEECC
Confidence 6 55443322110 011122223346778888876643 2233332 2222221111100 11111122222
Q ss_pred CCEEEEEcCcCCCCCccccCCcEEEEECCCCeEEEcccC
Q 002047 343 NARLHVSGGALGGGRMVEDSSSVAVLDTAAGVWCDTKSV 381 (975)
Q Consensus 343 ~~~L~V~GG~~~~~~~~~~~~dv~~yD~~t~~W~~v~~~ 381 (975)
++.+++.|+.++ .+.+||..+..|..+..+
T Consensus 161 ~~~~l~s~s~d~---------~i~~w~~~~~~~~~~~~~ 190 (345)
T 3fm0_A 161 SQELLASASYDD---------TVKLYREEEDDWVCCATL 190 (345)
T ss_dssp SSSCEEEEETTS---------CEEEEEEETTEEEEEEEE
T ss_pred CCCEEEEEeCCC---------cEEEEEecCCCEEEEEEe
Confidence 456777777543 377889889888765544
No 144
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=82.95 E-value=45 Score=37.13 Aligned_cols=154 Identities=13% Similarity=0.023 Sum_probs=72.1
Q ss_pred EEEEEeccCCCCCccccEEEEEcC--CCCCcEEEEEecCCCCCCCcccEEEEeCCcEEEEEcCCCCCCCCCcEEEEECCC
Q 002047 186 MVVIQGGIGPAGLSAEDLHVLDLT--QQRPRWHRVVVQGPGPGPRYGHVMALVGQRYLMAIGGNDGKRPLADVWALDTAA 263 (975)
Q Consensus 186 ~iyv~GG~~~~~~~~~dv~~yD~~--t~~~~W~~v~~~g~~P~~R~~h~~~~~~~~~lyV~GG~~g~~~~ndv~~yDl~s 263 (975)
.|++.|+. ...+.+||+. +.. .-..+... ..+..-.+++...++..++.|+.+ ..++.||+.+
T Consensus 116 ~l~~~~~~------dg~v~iwd~~~~~~~-~~~~~~~~---~~~~~v~~~~~sp~~~~l~~~~~~-----g~v~~~~~~~ 180 (450)
T 2vdu_B 116 RLIACADS------DKSLLVFDVDKTSKN-VLKLRKRF---CFSKRPNAISIAEDDTTVIIADKF-----GDVYSIDINS 180 (450)
T ss_dssp EEEEEEGG------GTEEEEEEECSSSSS-CEEEEEEE---ECSSCEEEEEECTTSSEEEEEETT-----SEEEEEETTS
T ss_pred EEEEEECC------CCeEEEEECcCCCCc-eeeeeecc---cCCCCceEEEEcCCCCEEEEEeCC-----CcEEEEecCC
Confidence 55677774 3568899987 432 12222210 011111233333333566666543 3678888876
Q ss_pred CCcEEEE--ccCCCCCCCCcceeEEEEEeC---CeEEEecCCCCCCCCccceEEeecCCCCeEEEEECCCCCCCCcceee
Q 002047 264 KPYEWRK--LEPEGEGPPPCMYATASARSD---GLLLLCGGRDASSVPLASAYGLAKHRDGRWEWAIAPGVSPSPRYQHA 338 (975)
Q Consensus 264 ~~~~W~~--v~~~~~~P~~r~~~~a~~~~~---g~lyvfGG~~~~~~~l~d~~~~~~~~~~~W~w~~~~g~~P~~R~~hs 338 (975)
. .... +..... ............+ +++++.|+.++. +..++.... ........+. ... -.+
T Consensus 181 ~--~~~~~~~~~~~~--h~~~v~~~~~sp~~~~~~~l~s~~~d~~------i~vwd~~~~-~~~~~~~~~h--~~~-v~~ 246 (450)
T 2vdu_B 181 I--PEEKFTQEPILG--HVSMLTDVHLIKDSDGHQFIITSDRDEH------IKISHYPQC-FIVDKWLFGH--KHF-VSS 246 (450)
T ss_dssp C--CCSSCCCCCSEE--CSSCEEEEEEEECTTSCEEEEEEETTSC------EEEEEESCT-TCEEEECCCC--SSC-EEE
T ss_pred c--ccccccceeeec--ccCceEEEEEcCCCCCCcEEEEEcCCCc------EEEEECCCC-ceeeeeecCC--CCc-eEE
Confidence 5 2111 000000 0011222334456 778888886532 333332222 1121112111 111 122
Q ss_pred EEEeCCEEEEEcCcCCCCCccccCCcEEEEECCCCeEEE
Q 002047 339 AVFVNARLHVSGGALGGGRMVEDSSSVAVLDTAAGVWCD 377 (975)
Q Consensus 339 ~v~~~~~L~V~GG~~~~~~~~~~~~dv~~yD~~t~~W~~ 377 (975)
+++.++.+++.|+.+ ..|.+||+.+.+...
T Consensus 247 ~~~sd~~~l~s~~~d---------~~v~vwd~~~~~~~~ 276 (450)
T 2vdu_B 247 ICCGKDYLLLSAGGD---------DKIFAWDWKTGKNLS 276 (450)
T ss_dssp EEECSTTEEEEEESS---------SEEEEEETTTCCEEE
T ss_pred EEECCCCEEEEEeCC---------CeEEEEECCCCcEee
Confidence 222267777787743 348899999886544
No 145
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=82.39 E-value=51 Score=36.31 Aligned_cols=123 Identities=11% Similarity=0.087 Sum_probs=59.1
Q ss_pred cEEEEECCCCcEEEecCCCCCCCCccceEEEEe-CCEEEEEeccCCCCCccccEEEEEcCCCCCcEEEEEecCCCCCCCc
Q 002047 151 DVHCYDVLTNKWSRITPFGEPPTPRAAHVATAV-GTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGPRY 229 (975)
Q Consensus 151 dv~~yD~~t~~W~~l~~~g~~P~pR~~hsa~~~-~~~iyv~GG~~~~~~~~~dv~~yD~~t~~~~W~~v~~~g~~P~~R~ 229 (975)
.+.+||..+......-.. .. ..-.+++.. ++.+++.|+. ...+.+||+.+.. .+. .+.....
T Consensus 131 ~i~vwd~~~~~~~~~l~~---h~-~~V~~v~~~~~~~~l~sgs~------D~~i~iwd~~~~~----~~~---~~~~h~~ 193 (410)
T 1vyh_C 131 TIKVWDYETGDFERTLKG---HT-DSVQDISFDHSGKLLASCSA------DMTIKLWDFQGFE----CIR---TMHGHDH 193 (410)
T ss_dssp CEEEEETTTCCCCEEECC---CS-SCEEEEEECTTSSEEEEEET------TSCCCEEETTSSC----EEE---CCCCCSS
T ss_pred eEEEEECCCCcEEEEEec---cC-CcEEEEEEcCCCCEEEEEeC------CCeEEEEeCCCCc----eeE---EEcCCCC
Confidence 677888877653322111 01 111122222 3467777775 2457788887642 232 1221111
Q ss_pred cc-EEEEeCCcEEEEEcCCCCCCCCCcEEEEECCCCCcEEEE-ccCCCCCCCCcceeEEEEEeCCeEEEecCCCC
Q 002047 230 GH-VMALVGQRYLMAIGGNDGKRPLADVWALDTAAKPYEWRK-LEPEGEGPPPCMYATASARSDGLLLLCGGRDA 302 (975)
Q Consensus 230 ~h-~~~~~~~~~lyV~GG~~g~~~~ndv~~yDl~s~~~~W~~-v~~~~~~P~~r~~~~a~~~~~g~lyvfGG~~~ 302 (975)
.- +++...++..++.|+.++ .+..||+.+. .-.. +..... .........++.+++.|+.++
T Consensus 194 ~V~~v~~~p~~~~l~s~s~D~-----~i~~wd~~~~--~~~~~~~~h~~-----~v~~~~~~~~g~~l~s~s~D~ 256 (410)
T 1vyh_C 194 NVSSVSIMPNGDHIVSASRDK-----TIKMWEVQTG--YCVKTFTGHRE-----WVRMVRPNQDGTLIASCSNDQ 256 (410)
T ss_dssp CEEEEEECSSSSEEEEEETTS-----EEEEEETTTC--CEEEEEECCSS-----CEEEEEECTTSSEEEEEETTS
T ss_pred CEEEEEEeCCCCEEEEEeCCC-----eEEEEECCCC--cEEEEEeCCCc-----cEEEEEECCCCCEEEEEcCCC
Confidence 22 222333335667777664 6888999876 3222 111111 111222334667777777654
No 146
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=82.17 E-value=51 Score=40.05 Aligned_cols=189 Identities=6% Similarity=0.008 Sum_probs=96.4
Q ss_pred CcEEEEECCCCcEEEecCCCCCCCCccceEEEEe-CCEEEEEeccCCCCCccccEEEEEcCCCCCcEEEEEecC---CCC
Q 002047 150 ADVHCYDVLTNKWSRITPFGEPPTPRAAHVATAV-GTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQG---PGP 225 (975)
Q Consensus 150 ~dv~~yD~~t~~W~~l~~~g~~P~pR~~hsa~~~-~~~iyv~GG~~~~~~~~~dv~~yD~~t~~~~W~~v~~~g---~~P 225 (975)
.-+++||+.+++++.+...........-.+++.. ++.|++... +-+++||+.+. +|+...... .++
T Consensus 427 ~Gl~~~d~~~~~~~~~~~~~~~l~~~~v~~i~~d~~g~lwigt~--------~Gl~~~~~~~~--~~~~~~~~~~~~~~~ 496 (795)
T 4a2l_A 427 GGLSILHRNSGQVENFNQRNSQLVNENVYAILPDGEGNLWLGTL--------SALVRFNPEQR--SFTTIEKEKDGTPVV 496 (795)
T ss_dssp TEEEEEETTTCCEEEECTTTSCCSCSCEEEEEECSSSCEEEEES--------SCEEEEETTTT--EEEECCBCTTCCBCC
T ss_pred CceeEEeCCCCcEEEeecCCCCcCCCeeEEEEECCCCCEEEEec--------CceeEEeCCCC--eEEEccccccccccC
Confidence 5788999999888887542110011112223322 346666432 24889998876 477664220 111
Q ss_pred CCCcccEEEEeCCcEEEEEcCCCCCCCCCcEEEEECCCCCcEEEEccCCCCCC-CCcceeEEEEE-eCCeEEEecCCCCC
Q 002047 226 GPRYGHVMALVGQRYLMAIGGNDGKRPLADVWALDTAAKPYEWRKLEPEGEGP-PPCMYATASAR-SDGLLLLCGGRDAS 303 (975)
Q Consensus 226 ~~R~~h~~~~~~~~~lyV~GG~~g~~~~ndv~~yDl~s~~~~W~~v~~~~~~P-~~r~~~~a~~~-~~g~lyvfGG~~~~ 303 (975)
... -.+++.-.++.||+... .-+++||+.+. ++ ......... .+.....+... .++.||+...
T Consensus 497 ~~~-i~~i~~d~~g~lWigt~-------~Gl~~~~~~~~--~~-~~~~~~~~~~l~~~~i~~i~~d~~g~lWigT~---- 561 (795)
T 4a2l_A 497 SKQ-ITTLFRDSHKRLWIGGE-------EGLSVFKQEGL--DI-QKASILPVSNVTKLFTNCIYEASNGIIWVGTR---- 561 (795)
T ss_dssp CCC-EEEEEECTTCCEEEEES-------SCEEEEEEETT--EE-EECCCSCSCGGGGSCEEEEEECTTSCEEEEES----
T ss_pred Cce-EEEEEECCCCCEEEEeC-------CceEEEeCCCC--eE-EEecCCCCCCCCCCeeEEEEECCCCCEEEEeC----
Confidence 111 12222333446887543 24899999888 77 443211111 01111222222 4678888532
Q ss_pred CCCccceEEeecCCCCeEEEEECCCCCCCCcceeeEEEe-CCEEEEEcCcCCCCCccccCCcEEEEECCCCeEEEccc
Q 002047 304 SVPLASAYGLAKHRDGRWEWAIAPGVSPSPRYQHAAVFV-NARLHVSGGALGGGRMVEDSSSVAVLDTAAGVWCDTKS 380 (975)
Q Consensus 304 ~~~l~d~~~~~~~~~~~W~w~~~~g~~P~~R~~hs~v~~-~~~L~V~GG~~~~~~~~~~~~dv~~yD~~t~~W~~v~~ 380 (975)
.-++.|+.... .++........|... -.+++.- ++.|++.+. +.+.+||+++.++.....
T Consensus 562 ----~Gl~~~d~~~~-~~~~~~~~~gl~~~~-i~~i~~d~~g~lWi~t~-----------~Gl~~~~~~~~~~~~~~~ 622 (795)
T 4a2l_A 562 ----EGFYCFNEKDK-QIKRYNTTNGLPNNV-VYGILEDSFGRLWLSTN-----------RGISCFNPETEKFRNFTE 622 (795)
T ss_dssp ----SCEEEEETTTT-EEEEECGGGTCSCSC-EEEEEECTTSCEEEEET-----------TEEEEEETTTTEEEEECG
T ss_pred ----CCceeECCCCC-cEEEeCCCCCCchhh-eEEEEECCCCCEEEEcC-----------CceEEEcCCCCcEEEcCC
Confidence 13566765543 444332221122222 2333333 467877542 238899999999887654
No 147
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=82.16 E-value=67 Score=35.63 Aligned_cols=63 Identities=16% Similarity=0.158 Sum_probs=35.1
Q ss_pred CEEEEEeccCCCCCccccEEEEEcCCCCCcEEEEEecCCCCCCCcccEEEEeCCcEEEEEcCCCCCCCCCcEEEEECCCC
Q 002047 185 TMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGPRYGHVMALVGQRYLMAIGGNDGKRPLADVWALDTAAK 264 (975)
Q Consensus 185 ~~iyv~GG~~~~~~~~~dv~~yD~~t~~~~W~~v~~~g~~P~~R~~h~~~~~~~~~lyV~GG~~g~~~~ndv~~yDl~s~ 264 (975)
+.+++.|+. ...+.+||+.+.. .......+ ..... .+++..++ .+++.|+.++ .|..||+.+.
T Consensus 210 ~~~l~s~~~------d~~i~vwd~~~~~--~~~~~~~~--h~~~v-~~~~~sd~-~~l~s~~~d~-----~v~vwd~~~~ 272 (450)
T 2vdu_B 210 HQFIITSDR------DEHIKISHYPQCF--IVDKWLFG--HKHFV-SSICCGKD-YLLLSAGGDD-----KIFAWDWKTG 272 (450)
T ss_dssp CEEEEEEET------TSCEEEEEESCTT--CEEEECCC--CSSCE-EEEEECST-TEEEEEESSS-----EEEEEETTTC
T ss_pred CcEEEEEcC------CCcEEEEECCCCc--eeeeeecC--CCCce-EEEEECCC-CEEEEEeCCC-----eEEEEECCCC
Confidence 667777775 3579999988753 22211111 11111 22222234 5666776553 7888999877
No 148
>4h2g_A 5'-nucleotidase; dimer, hydrolase, phosphatase, extracellular; HET: ADN; 1.55A {Homo sapiens} PDB: 4h2f_A* 4h1y_P* 4h2i_A* 4h1s_A* 4h2b_A*
Probab=81.92 E-value=0.9 Score=53.62 Aligned_cols=68 Identities=21% Similarity=0.213 Sum_probs=43.3
Q ss_pred cCCEEEEecCCCCH--------------------HHHHHHHHHhCCCCCCCCccceeEEEeccccCCCCCh-----HHHH
Q 002047 697 KAPIKIFGDLHGQF--------------------GDLMRLFDEYGSPSTAGDIAYIDYLFLGDYVDRGQHS-----LETI 751 (975)
Q Consensus 697 ~~~i~vvGDiHG~~--------------------~~L~~ll~~~g~~~~~~~~~~~~~vfLGDyVDRG~~s-----~evl 751 (975)
+..|+.+.|+||.+ ..|..+++.+.-.... .-+|+.||+++..+.+ ..++
T Consensus 25 ~l~Il~~nD~Hg~~~~~~~~~~~~~~~~~~~gG~a~l~~~i~~~r~~~~~-----~l~l~~GD~~~g~~~~~~~~g~~~~ 99 (546)
T 4h2g_A 25 ELTILHTNDVHSRLEQTSEDSSKCVDASRCMGGVARLFTKVQQIRRAEPN-----VLLLDAGDQYQGTIWFTVYKGAEVA 99 (546)
T ss_dssp EEEEEEECCCTTCCSCBCTTSSBCSSGGGCBCCHHHHHHHHHHHHHHCSS-----EEEEECSCCSSSSHHHHHHTTHHHH
T ss_pred EEEEEEecccccCCcccccccccccccccccCCHHHHHHHHHHHHhhCCC-----EEEEECCccCCCchhhhhhCChHHH
Confidence 35689999999874 4455566554321111 1467799999987532 4456
Q ss_pred HHHHHhhhcCCCCEEEEeccccc
Q 002047 752 TLLLALKVEYPNNVHLIRGNHEA 774 (975)
Q Consensus 752 ~ll~~lk~~~P~~v~llrGNHE~ 774 (975)
.+|-++.. -++..||||.
T Consensus 100 ~~ln~lg~-----d~~~~GNHEf 117 (546)
T 4h2g_A 100 HFMNALRY-----DAMALGNHEF 117 (546)
T ss_dssp HHHHHHTC-----SEEECCGGGG
T ss_pred HHHHhcCC-----cEEeccCccc
Confidence 66666532 2567899996
No 149
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=81.84 E-value=18 Score=39.25 Aligned_cols=68 Identities=16% Similarity=0.164 Sum_probs=35.5
Q ss_pred CEEEEEeccCCCCCccccEEEEEcCCCCCc---EEEEEecCCCC-CCCcccEEEEeCC-cEEEEEcCCCCCCCCCcEEEE
Q 002047 185 TMVVIQGGIGPAGLSAEDLHVLDLTQQRPR---WHRVVVQGPGP-GPRYGHVMALVGQ-RYLMAIGGNDGKRPLADVWAL 259 (975)
Q Consensus 185 ~~iyv~GG~~~~~~~~~dv~~yD~~t~~~~---W~~v~~~g~~P-~~R~~h~~~~~~~-~~lyV~GG~~g~~~~ndv~~y 259 (975)
+.+++.|+. ...+.+||+.+.... +..... .... ....-.+++...+ +.+++.|+.++ .+..|
T Consensus 126 ~~~l~s~~~------dg~v~iwd~~~~~~~~~~~~~~~~-~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg-----~v~iw 193 (416)
T 2pm9_A 126 DNVLASGGN------NGEIFIWDMNKCTESPSNYTPLTP-GQSMSSVDEVISLAWNQSLAHVFASAGSSN-----FASIW 193 (416)
T ss_dssp TTBEEEECS------SSCEEBCBTTTTSSCTTTCCCBCC-CCSCCSSCCCCEEEECSSCTTEEEEESSSS-----CEEEE
T ss_pred CCEEEEEcC------CCeEEEEECCCCcccccccccccc-ccccCCCCCeeEEEeCCCCCcEEEEEcCCC-----CEEEE
Confidence 566667664 346889998775200 011110 0111 1111223333332 36777777654 58999
Q ss_pred ECCCC
Q 002047 260 DTAAK 264 (975)
Q Consensus 260 Dl~s~ 264 (975)
|+.+.
T Consensus 194 d~~~~ 198 (416)
T 2pm9_A 194 DLKAK 198 (416)
T ss_dssp ETTTT
T ss_pred ECCCC
Confidence 99887
No 150
>1qhu_A Protein (hemopexin); beta propeller, HAEM binding and transport, iron metabolism, binding protein; HET: HEM; 2.30A {Oryctolagus cuniculus} SCOP: b.66.1.1 b.66.1.1 PDB: 1qjs_A*
Probab=81.65 E-value=36 Score=38.82 Aligned_cols=49 Identities=8% Similarity=-0.119 Sum_probs=31.7
Q ss_pred cEEEEECCCCcEEEecCCCCCCCCccceEEEEeCCEEEEEeccCCCCCccccEEEEEcCCC
Q 002047 151 DVHCYDVLTNKWSRITPFGEPPTPRAAHVATAVGTMVVIQGGIGPAGLSAEDLHVLDLTQQ 211 (975)
Q Consensus 151 dv~~yD~~t~~W~~l~~~g~~P~pR~~hsa~~~~~~iyv~GG~~~~~~~~~dv~~yD~~t~ 211 (975)
..|+||..+.+...-.-.| .+. --+|....+++|+|-|. ..|+||..+.
T Consensus 168 ~yw~yd~~~~~~~~~~w~g---i~~-iDAA~~~~g~~YfFkG~--------~y~rfd~~~~ 216 (460)
T 1qhu_A 168 RKWFWDLTTGTKKERSWPA---VGN-CTSALRWLGRYYCFQGN--------QFLRFNPVSG 216 (460)
T ss_dssp EEEEEETTTTEEEEECCTT---SCC-CSEEEEETTEEEEEETT--------EEEEECTTTC
T ss_pred cEEEEecccceeecccCCC---CCc-cchheeeCCceEEEECC--------EEEEEcCccC
Confidence 5789999887665432221 223 34555567899999883 6788887553
No 151
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=81.00 E-value=47 Score=36.25 Aligned_cols=92 Identities=13% Similarity=0.070 Sum_probs=47.9
Q ss_pred cEEEEECCCCcEEEecCCCCCCCCccceEEEEe-CCEEEEEeccCCCCCccccEEEEEcCCCCCcEEEEEecCCCCCCCc
Q 002047 151 DVHCYDVLTNKWSRITPFGEPPTPRAAHVATAV-GTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGPRY 229 (975)
Q Consensus 151 dv~~yD~~t~~W~~l~~~g~~P~pR~~hsa~~~-~~~iyv~GG~~~~~~~~~dv~~yD~~t~~~~W~~v~~~g~~P~~R~ 229 (975)
.+.+||+.+.+-...-.. ....-.+++.. ++..++.|+. ...+.+||+.+.. ..... . ....
T Consensus 146 ~i~iwd~~~~~~~~~~~~----h~~~v~~~~~~p~~~~l~s~s~------d~~v~iwd~~~~~--~~~~~-~----~~~~ 208 (393)
T 1erj_A 146 LIRIWDIENRKIVMILQG----HEQDIYSLDYFPSGDKLVSGSG------DRTVRIWDLRTGQ--CSLTL-S----IEDG 208 (393)
T ss_dssp CEEEEETTTTEEEEEECC----CSSCEEEEEECTTSSEEEEEET------TSEEEEEETTTTE--EEEEE-E----CSSC
T ss_pred eEEEEECCCCcEEEEEcc----CCCCEEEEEEcCCCCEEEEecC------CCcEEEEECCCCe--eEEEE-E----cCCC
Confidence 678889888765433211 11112223332 3445556654 3578899998753 22211 1 0111
Q ss_pred ccEEEEeC-CcEEEEEcCCCCCCCCCcEEEEECCCC
Q 002047 230 GHVMALVG-QRYLMAIGGNDGKRPLADVWALDTAAK 264 (975)
Q Consensus 230 ~h~~~~~~-~~~lyV~GG~~g~~~~ndv~~yDl~s~ 264 (975)
-.+++... ++.+++.|+.++ .+..||+.+.
T Consensus 209 v~~~~~~~~~~~~l~~~s~d~-----~v~iwd~~~~ 239 (393)
T 1erj_A 209 VTTVAVSPGDGKYIAAGSLDR-----AVRVWDSETG 239 (393)
T ss_dssp EEEEEECSTTCCEEEEEETTS-----CEEEEETTTC
T ss_pred cEEEEEECCCCCEEEEEcCCC-----cEEEEECCCC
Confidence 12222222 446777787765 5788898876
No 152
>2z1a_A 5'-nucleotidase; metal-binding, nucleotide-binding, hydrolase, structural genomics, NPPSFA; HET: THM; 1.75A {Thermus thermophilus} SCOP: d.114.1.1 d.159.1.2
Probab=80.94 E-value=1.2 Score=52.51 Aligned_cols=69 Identities=20% Similarity=0.217 Sum_probs=43.0
Q ss_pred cCCEEEEecCCCCH-----------------HHHHHHHHHhCCCCCCCCccceeEEEeccccCCCCC-----hHHHHHHH
Q 002047 697 KAPIKIFGDLHGQF-----------------GDLMRLFDEYGSPSTAGDIAYIDYLFLGDYVDRGQH-----SLETITLL 754 (975)
Q Consensus 697 ~~~i~vvGDiHG~~-----------------~~L~~ll~~~g~~~~~~~~~~~~~vfLGDyVDRG~~-----s~evl~ll 754 (975)
..+|+.++|+||.+ ..+..+++.+.-...+ .-+|..||++++.+. ...++.+|
T Consensus 29 ~l~Il~~~D~H~~~~~~~~~~~~~~~~~gg~~~~~~~v~~~r~~~~~-----~l~l~~GD~~~gs~~~~~~~~~~~~~~l 103 (552)
T 2z1a_A 29 TLTLVHTNDTHAHLEPVELTLSGEKTPVGGVARRVALFDRVWARAKN-----PLFLDAGDVFQGTLYFNQYRGLADRYFM 103 (552)
T ss_dssp EEEEEEECCCTTCCSCEEEECSSSEEEECCHHHHHHHHHHHHHHSSS-----EEEEECSCCSSSSHHHHHHTTHHHHHHH
T ss_pred eEEEEEEcccccCcccccccCcccccccCCHHHHHHHHHHHHhhCCC-----EEEEeCCCCCCCcHHHHHhCCcHHHHHH
Confidence 35689999999864 3566666654321111 145679999997653 23455555
Q ss_pred HHhhhcCCCCEEEEecccccc
Q 002047 755 LALKVEYPNNVHLIRGNHEAA 775 (975)
Q Consensus 755 ~~lk~~~P~~v~llrGNHE~~ 775 (975)
-.+. --++..||||..
T Consensus 104 n~lg-----~d~~~lGNHEfd 119 (552)
T 2z1a_A 104 HRLR-----YRAMALGNHEFD 119 (552)
T ss_dssp HHTT-----CCEEECCGGGGT
T ss_pred HhcC-----CCcccccccccc
Confidence 5542 236678999973
No 153
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=80.82 E-value=10 Score=40.86 Aligned_cols=134 Identities=13% Similarity=0.168 Sum_probs=57.9
Q ss_pred cEEEEECCCCcEEEecCCCCCCCCccceEEEEe-CCEEEEEeccCCCCCccccEEEEEcCCCCCcEEEEEecCCCCCCCc
Q 002047 151 DVHCYDVLTNKWSRITPFGEPPTPRAAHVATAV-GTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGPRY 229 (975)
Q Consensus 151 dv~~yD~~t~~W~~l~~~g~~P~pR~~hsa~~~-~~~iyv~GG~~~~~~~~~dv~~yD~~t~~~~W~~v~~~g~~P~~R~ 229 (975)
.+.+||+.+..|..+.... .....-.+++.. ++.+++.|+. ...+.+||+.+.. .|....... .....
T Consensus 34 ~i~iw~~~~~~~~~~~~~~--~h~~~v~~~~~s~~~~~l~s~s~------d~~v~vwd~~~~~-~~~~~~~~~--~~~~~ 102 (377)
T 3dwl_C 34 QVELYEQDGNGWKHARTFS--DHDKIVTCVDWAPKSNRIVTCSQ------DRNAYVYEKRPDG-TWKQTLVLL--RLNRA 102 (377)
T ss_dssp CBCEEEEETTEEEECCCBC--CCSSCEEEEEECTTTCCEEEEET------TSSEEEC-------CCCCEEECC--CCSSC
T ss_pred EEEEEEccCCceEEEEEEe--cCCceEEEEEEeCCCCEEEEEeC------CCeEEEEEcCCCC-ceeeeeEec--ccCCc
Confidence 5667888888887776542 111111222222 3466677764 3468899987752 233332111 11111
Q ss_pred ccEEEEeCCcEEEEEcCCCCCCCCCcEEEEECCCCCcEEEEccCCCCCCCCcceeEEEEEeCCeEEEecCCCC
Q 002047 230 GHVMALVGQRYLMAIGGNDGKRPLADVWALDTAAKPYEWRKLEPEGEGPPPCMYATASARSDGLLLLCGGRDA 302 (975)
Q Consensus 230 ~h~~~~~~~~~lyV~GG~~g~~~~ndv~~yDl~s~~~~W~~v~~~~~~P~~r~~~~a~~~~~g~lyvfGG~~~ 302 (975)
-.+++...++.+++.|+.++ .+..||+.+.. .|..+..... +............++.+++.|+.++
T Consensus 103 v~~~~~~~~~~~l~~~~~d~-----~i~iwd~~~~~-~~~~~~~~~~-~h~~~v~~~~~~~~~~~l~~~~~d~ 168 (377)
T 3dwl_C 103 ATFVRWSPNEDKFAVGSGAR-----VISVCYFEQEN-DWWVSKHLKR-PLRSTILSLDWHPNNVLLAAGCADR 168 (377)
T ss_dssp EEEEECCTTSSCCEEEESSS-----CEEECCC------CCCCEEECS-SCCSCEEEEEECTTSSEEEEEESSS
T ss_pred eEEEEECCCCCEEEEEecCC-----eEEEEEECCcc-cceeeeEeec-ccCCCeEEEEEcCCCCEEEEEeCCC
Confidence 12222223335666776654 47777877651 1322221111 0111222223334677778777654
No 154
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=80.77 E-value=50 Score=34.47 Aligned_cols=193 Identities=9% Similarity=-0.008 Sum_probs=85.5
Q ss_pred cEEEEEC-CCCcEEEecCCCCCCCCccceEEEEeCCEEEEEeccCCCCCccccEEEEEcCCCCCcEEE--EEecCCCCCC
Q 002047 151 DVHCYDV-LTNKWSRITPFGEPPTPRAAHVATAVGTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHR--VVVQGPGPGP 227 (975)
Q Consensus 151 dv~~yD~-~t~~W~~l~~~g~~P~pR~~hsa~~~~~~iyv~GG~~~~~~~~~dv~~yD~~t~~~~W~~--v~~~g~~P~~ 227 (975)
.+..||+ .+.....+... +....-.+++...+.+++.|+. ...+.+||+.+....-.. ..........
T Consensus 80 ~i~~wd~~~~~~~~~~~~~---~~~~~v~~l~~~~~~~l~s~~~------d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~ 150 (342)
T 1yfq_A 80 EILKVDLIGSPSFQALTNN---EANLGICRICKYGDDKLIAASW------DGLIEVIDPRNYGDGVIAVKNLNSNNTKVK 150 (342)
T ss_dssp CEEEECSSSSSSEEECBSC---CCCSCEEEEEEETTTEEEEEET------TSEEEEECHHHHTTBCEEEEESCSSSSSSC
T ss_pred eEEEEEeccCCceEecccc---CCCCceEEEEeCCCCEEEEEcC------CCeEEEEcccccccccccccCCeeeEEeeC
Confidence 6888998 88877666431 0111122233332445555553 356888887651000000 0000112212
Q ss_pred CcccEEEEeCCcEEEEEcCCCCCCCCCcEEEEECCC-CCcEEEEccCCCCCCCCcceeEEEEEe-CCeEEEecCCCCCCC
Q 002047 228 RYGHVMALVGQRYLMAIGGNDGKRPLADVWALDTAA-KPYEWRKLEPEGEGPPPCMYATASARS-DGLLLLCGGRDASSV 305 (975)
Q Consensus 228 R~~h~~~~~~~~~lyV~GG~~g~~~~ndv~~yDl~s-~~~~W~~v~~~~~~P~~r~~~~a~~~~-~g~lyvfGG~~~~~~ 305 (975)
..-.++....+ . ++.|+.+ ..+..||+.+ ............. .......... ++.+++.|+.++.
T Consensus 151 ~~v~~~~~~~~-~-l~~~~~d-----~~i~i~d~~~~~~~~~~~~~~~~~----~~i~~i~~~~~~~~~l~~~~~dg~-- 217 (342)
T 1yfq_A 151 NKIFTMDTNSS-R-LIVGMNN-----SQVQWFRLPLCEDDNGTIEESGLK----YQIRDVALLPKEQEGYACSSIDGR-- 217 (342)
T ss_dssp CCEEEEEECSS-E-EEEEEST-----TEEEEEESSCCTTCCCEEEECSCS----SCEEEEEECSGGGCEEEEEETTSE--
T ss_pred CceEEEEecCC-c-EEEEeCC-----CeEEEEECCccccccceeeecCCC----CceeEEEECCCCCCEEEEEecCCc--
Confidence 22223333344 4 5555544 3688999987 3112222211111 1112222333 5677777775432
Q ss_pred CccceEEeecC-----CCCeEEEEECCCCCC---CCcceeeEEEe-CCEEEEEcCcCCCCCccccCCcEEEEECCCCeEE
Q 002047 306 PLASAYGLAKH-----RDGRWEWAIAPGVSP---SPRYQHAAVFV-NARLHVSGGALGGGRMVEDSSSVAVLDTAAGVWC 376 (975)
Q Consensus 306 ~l~d~~~~~~~-----~~~~W~w~~~~g~~P---~~R~~hs~v~~-~~~L~V~GG~~~~~~~~~~~~dv~~yD~~t~~W~ 376 (975)
..+|.++.. ......+........ ....-.++++. ++.+++.|+.++ .|.+||+.+.+-.
T Consensus 218 --i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg---------~i~vwd~~~~~~~ 286 (342)
T 1yfq_A 218 --VAVEFFDDQGDDYNSSKRFAFRCHRLNLKDTNLAYPVNSIEFSPRHKFLYTAGSDG---------IISCWNLQTRKKI 286 (342)
T ss_dssp --EEEEECCTTCCSTTCTTCEEEECCCCCTTCCSSCCCEEEEEECTTTCCEEEEETTS---------CEEEEETTTTEEE
T ss_pred --EEEEEEcCCCcccccccceeeecccccccccccceeEEEEEEcCCCCEEEEecCCc---------eEEEEcCccHhHh
Confidence 234545443 122222221111000 00011222333 466777777532 3889999988653
No 155
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=80.62 E-value=36 Score=40.68 Aligned_cols=110 Identities=7% Similarity=-0.029 Sum_probs=49.4
Q ss_pred cEEEEECCC-CCcEEEEccCCCCCCCCcceeEEEEEeCCeEEEecCCCCCCCCccceEEeecCCCCeEEEEECCCCCCCC
Q 002047 255 DVWALDTAA-KPYEWRKLEPEGEGPPPCMYATASARSDGLLLLCGGRDASSVPLASAYGLAKHRDGRWEWAIAPGVSPSP 333 (975)
Q Consensus 255 dv~~yDl~s-~~~~W~~v~~~~~~P~~r~~~~a~~~~~g~lyvfGG~~~~~~~l~d~~~~~~~~~~~W~w~~~~g~~P~~ 333 (975)
.++.+|+.+ . +-..+.... .........+. .+++.++++..+... ...+++.++..+. .............-
T Consensus 264 ~l~~~d~~~~~--~~~~~~~~~--~~~~~~~~~~~-pDg~~l~~~~~~~~~-~~~~i~~~d~~~g-~~~~~~~~~~~~~~ 336 (741)
T 2ecf_A 264 KLGVISPAEQA--QTQWIDLGK--EQDIYLARVNW-RDPQHLSFQRQSRDQ-KKLDLVEVTLASN-QQRVLAHETSPTWV 336 (741)
T ss_dssp EEEEECSSTTC--CCEEECCCS--CSSEEEEEEEE-EETTEEEEEEEETTS-SEEEEEEEETTTC-CEEEEEEEECSSCC
T ss_pred EEEEEECCCCC--ceEEecCCC--CcceEEEEEEe-CCCCEEEEEEecccC-CeEEEEEEECCCC-ceEEEEEcCCCCcC
Confidence 789999988 7 333332210 01112223334 566555554432221 2355666655433 32222111000000
Q ss_pred cceeeEEE-eCCEEEEEcCcCCCCCccccCCcEEEEECCCCeEEEcc
Q 002047 334 RYQHAAVF-VNARLHVSGGALGGGRMVEDSSSVAVLDTAAGVWCDTK 379 (975)
Q Consensus 334 R~~hs~v~-~~~~L~V~GG~~~~~~~~~~~~dv~~yD~~t~~W~~v~ 379 (975)
....+.++ -++++++.+..++ ...+|.+|+... +..+.
T Consensus 337 ~~~~~~~~spdg~~~~~~~~~g-------~~~l~~~~~~~~-~~~l~ 375 (741)
T 2ecf_A 337 PLHNSLRFLDDGSILWSSERTG-------FQHLYRIDSKGK-AAALT 375 (741)
T ss_dssp CCCSCCEECTTSCEEEEECTTS-------SCEEEEECSSSC-EEESC
T ss_pred CcCCceEECCCCeEEEEecCCC-------ccEEEEEcCCCC-eeeee
Confidence 00112222 2566666665432 356999998766 55443
No 156
>4d9s_A UVB-resistance protein UVR8; UV resistance, UV-B photoreceptor, tryptophan chromophores, homodimer, COP1, chromatin-binding protein; 1.70A {Arabidopsis thaliana} PDB: 4dnw_A 4dnu_A 4dnv_A
Probab=80.47 E-value=76 Score=35.18 Aligned_cols=63 Identities=17% Similarity=0.125 Sum_probs=34.9
Q ss_pred cccEEEEeCCcEEEEEcCCCCCC----CCCcEEEEE-C---CCCCcEEEEccCCCCCCCCcceeEEEEEeCCeEEEecCC
Q 002047 229 YGHVMALVGQRYLMAIGGNDGKR----PLADVWALD-T---AAKPYEWRKLEPEGEGPPPCMYATASARSDGLLLLCGGR 300 (975)
Q Consensus 229 ~~h~~~~~~~~~lyV~GG~~g~~----~~ndv~~yD-l---~s~~~~W~~v~~~~~~P~~r~~~~a~~~~~g~lyvfGG~ 300 (975)
..|++++..++.+|.+|-..... ...+...-. + ... ....+.. ...|+++...++.+|.+|-.
T Consensus 130 ~~h~~alt~~G~v~~wG~n~~GqLG~g~~~~~~~p~~v~~~~~~--~i~~va~-------G~~hs~alt~~G~v~~wG~n 200 (406)
T 4d9s_A 130 DSHCLAVTMEGEVQSWGRNQNGQLGLGDTEDSLVPQKIQAFEGI--RIKMVAA-------GAEHTAAVTEDGDLYGWGWG 200 (406)
T ss_dssp SSEEEEEETTSCEEEEECCTTSTTCSSSCCCEEEEEECGGGTTC--CEEEEEE-------CSSEEEEEETTSCEEEEECC
T ss_pred hhheEEEcCCCcEEEeCCCCCccCCCCCCCCcccceEecccCCC--cEEEEec-------CCCeEEEEeCCCCEEEeeCC
Confidence 46888887777999999653211 111111100 0 001 2222221 24677788889999999853
No 157
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=79.78 E-value=60 Score=33.53 Aligned_cols=188 Identities=10% Similarity=-0.031 Sum_probs=90.9
Q ss_pred cCcEEEEECCCCcEEEecCCCCCCCCccceEEEEe-CCEEEEEeccCCCCCccccEEEEEcCCCCCcEEEEEec-CCCCC
Q 002047 149 TADVHCYDVLTNKWSRITPFGEPPTPRAAHVATAV-GTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQ-GPGPG 226 (975)
Q Consensus 149 ~~dv~~yD~~t~~W~~l~~~g~~P~pR~~hsa~~~-~~~iyv~GG~~~~~~~~~dv~~yD~~t~~~~W~~v~~~-g~~P~ 226 (975)
...+++||+.+. .+.+... . ..-++++.. ++++|+.... ...+++||+.+.. ...+... ...+.
T Consensus 49 ~~~i~~~~~~~~-~~~~~~~----~-~~~~~l~~~~dg~l~v~~~~------~~~i~~~d~~~g~--~~~~~~~~~~~~~ 114 (296)
T 3e5z_A 49 QNRTWAWSDDGQ-LSPEMHP----S-HHQNGHCLNKQGHLIACSHG------LRRLERQREPGGE--WESIADSFEGKKL 114 (296)
T ss_dssp GTEEEEEETTSC-EEEEESS----C-SSEEEEEECTTCCEEEEETT------TTEEEEECSTTCC--EEEEECEETTEEC
T ss_pred CCEEEEEECCCC-eEEEECC----C-CCcceeeECCCCcEEEEecC------CCeEEEEcCCCCc--EEEEeeccCCCCC
Confidence 347899999988 6665432 1 112334443 4577765431 2468999987654 5544311 11111
Q ss_pred CCcccEEEEeCCcEEEEE----cCCC------C--CCCCCcEEEEECCCCCcEEEEccCCCCCCCCcceeEEEEEeCCeE
Q 002047 227 PRYGHVMALVGQRYLMAI----GGND------G--KRPLADVWALDTAAKPYEWRKLEPEGEGPPPCMYATASARSDGLL 294 (975)
Q Consensus 227 ~R~~h~~~~~~~~~lyV~----GG~~------g--~~~~ndv~~yDl~s~~~~W~~v~~~~~~P~~r~~~~a~~~~~g~l 294 (975)
.+. ..+++-.++.||+. |... . ......+|+||+. . +...+..... .-...+...++++
T Consensus 115 ~~~-~~i~~d~~G~l~vtd~~~g~~~~~~~~~~~~~~~~~~l~~~~~~-g--~~~~~~~~~~-----~~~gi~~s~dg~~ 185 (296)
T 3e5z_A 115 NSP-NDVCLAPDGSLWFSDPTYGIDKPEEGYGGEMELPGRWVFRLAPD-G--TLSAPIRDRV-----KPNGLAFLPSGNL 185 (296)
T ss_dssp CCC-CCEEECTTSCEEEEECSHHHHCGGGSSCCCCCSSSCEEEEECTT-S--CEEEEECCCS-----SEEEEEECTTSCE
T ss_pred CCC-CCEEECCCCCEEEECCccccccccccccccccCCCcEEEEECCC-C--CEEEeecCCC-----CCccEEECCCCCE
Confidence 111 23334444578886 4311 0 1113579999987 4 4444332211 1122233345666
Q ss_pred EEecCCCCCCCCccceEEeecCCCCeE-EEEEC-CCCCCCCcceeeEEEe-CCEEEEEcCcCCCCCccccCCcEEEEECC
Q 002047 295 LLCGGRDASSVPLASAYGLAKHRDGRW-EWAIA-PGVSPSPRYQHAAVFV-NARLHVSGGALGGGRMVEDSSSVAVLDTA 371 (975)
Q Consensus 295 yvfGG~~~~~~~l~d~~~~~~~~~~~W-~w~~~-~g~~P~~R~~hs~v~~-~~~L~V~GG~~~~~~~~~~~~dv~~yD~~ 371 (975)
++.+.. ...++.|+...++.. .-... ......+ .++++- +++|||..+ +.|.+||+.
T Consensus 186 lv~~~~------~~~i~~~~~~~~g~~~~~~~~~~~~~~~p---~~i~~d~~G~l~v~~~-----------~~v~~~~~~ 245 (296)
T 3e5z_A 186 LVSDTG------DNATHRYCLNARGETEYQGVHFTVEPGKT---DGLRVDAGGLIWASAG-----------DGVHVLTPD 245 (296)
T ss_dssp EEEETT------TTEEEEEEECSSSCEEEEEEEECCSSSCC---CSEEEBTTSCEEEEET-----------TEEEEECTT
T ss_pred EEEeCC------CCeEEEEEECCCCcCcCCCeEeeCCCCCC---CeEEECCCCCEEEEcC-----------CeEEEECCC
Confidence 644332 134666655434444 11111 1110011 123333 577888651 238899998
Q ss_pred CCeEEEcc
Q 002047 372 AGVWCDTK 379 (975)
Q Consensus 372 t~~W~~v~ 379 (975)
......+.
T Consensus 246 g~~~~~~~ 253 (296)
T 3e5z_A 246 GDELGRVL 253 (296)
T ss_dssp SCEEEEEE
T ss_pred CCEEEEEE
Confidence 65544443
No 158
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=79.65 E-value=19 Score=38.82 Aligned_cols=131 Identities=11% Similarity=0.054 Sum_probs=64.8
Q ss_pred ccCcEEEEECCCCcEEEecCCCCCCCCccceEEEEe-CC-EEEEEeccCCCCCccccEEEEEcCCCCCcEEEEEecCCCC
Q 002047 148 ATADVHCYDVLTNKWSRITPFGEPPTPRAAHVATAV-GT-MVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGP 225 (975)
Q Consensus 148 ~~~dv~~yD~~t~~W~~l~~~g~~P~pR~~hsa~~~-~~-~iyv~GG~~~~~~~~~dv~~yD~~t~~~~W~~v~~~g~~P 225 (975)
....++.+|+.+.+...+... .....+....- ++ +|++... .........+|++|+.+.. +..+. . .
T Consensus 166 ~~~~l~~~d~~~g~~~~~~~~----~~~~~~~~~sp~dg~~l~~~~~-~~~~~~~~~l~~~d~~~~~--~~~l~---~-~ 234 (396)
T 3c5m_A 166 PTCRLIKVDIETGELEVIHQD----TAWLGHPIYRPFDDSTVGFCHE-GPHDLVDARMWLVNEDGSN--VRKIK---E-H 234 (396)
T ss_dssp CCEEEEEEETTTCCEEEEEEE----SSCEEEEEEETTEEEEEEEEEC-SCSSSCSCCCEEEETTSCC--CEESS---C-C
T ss_pred CcceEEEEECCCCcEEeeccC----CcccccceECCCCCCEEEEEec-CCCCCCCceEEEEECCCCc--eeEee---c-c
Confidence 345799999999888777532 11222222322 24 3444432 2211223579999987653 55553 1 1
Q ss_pred CCCccc-EEEEe-CCcEEEEEcCCCCCCCCCcEEEEECCCCCcEEEEccCCCCCCCCcceeEEEEEe-CCeEEEecC
Q 002047 226 GPRYGH-VMALV-GQRYLMAIGGNDGKRPLADVWALDTAAKPYEWRKLEPEGEGPPPCMYATASARS-DGLLLLCGG 299 (975)
Q Consensus 226 ~~R~~h-~~~~~-~~~~lyV~GG~~g~~~~ndv~~yDl~s~~~~W~~v~~~~~~P~~r~~~~a~~~~-~g~lyvfGG 299 (975)
.+.... ..... +++.|++.+ .........++++|+.+. +...+..... . . ..... +++++++.+
T Consensus 235 ~~~~~~~~~~~spdg~~l~~~~-~~~~~~~~~l~~~d~~~g--~~~~l~~~~~-----~-~-~~~s~~dg~~l~~~~ 301 (396)
T 3c5m_A 235 AEGESCTHEFWIPDGSAMAYVS-YFKGQTDRVIYKANPETL--ENEEVMVMPP-----C-S-HLMSNFDGSLMVGDG 301 (396)
T ss_dssp CTTEEEEEEEECTTSSCEEEEE-EETTTCCEEEEEECTTTC--CEEEEEECCS-----E-E-EEEECSSSSEEEEEE
T ss_pred CCCccccceEECCCCCEEEEEe-cCCCCccceEEEEECCCC--CeEEeeeCCC-----C-C-CCccCCCCceEEEec
Confidence 111111 12222 333344442 222222234999999887 6665543221 1 1 33344 677776654
No 159
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=79.65 E-value=29 Score=37.33 Aligned_cols=94 Identities=18% Similarity=0.199 Sum_probs=48.7
Q ss_pred CcEEEEECCCCcEEEecCCCCCCCCccceEEEEe--CCEEEEEeccCCCCCccccEEEEEcCCCCCcEEEEEecCCCCCC
Q 002047 150 ADVHCYDVLTNKWSRITPFGEPPTPRAAHVATAV--GTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGP 227 (975)
Q Consensus 150 ~dv~~yD~~t~~W~~l~~~g~~P~pR~~hsa~~~--~~~iyv~GG~~~~~~~~~dv~~yD~~t~~~~W~~v~~~g~~P~~ 227 (975)
..+..||+.+..-...... +.+......... ++.+++.|+. ...+.+||+.+... -..+. ..
T Consensus 122 ~~i~iwd~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~------~~~v~~~d~~~~~~-~~~~~------~~ 185 (408)
T 4a11_B 122 KTLKVWDTNTLQTADVFNF---EETVYSHHMSPVSTKHCLVAVGTR------GPKVQLCDLKSGSC-SHILQ------GH 185 (408)
T ss_dssp SEEEEEETTTTEEEEEEEC---SSCEEEEEECSSCSSCCEEEEEES------SSSEEEEESSSSCC-CEEEC------CC
T ss_pred CeEEEeeCCCCccceeccC---CCceeeeEeecCCCCCcEEEEEcC------CCeEEEEeCCCcce-eeeec------CC
Confidence 3688899988765544332 111111111111 2246666664 35799999987531 12221 11
Q ss_pred Cccc-EEEEeC-CcEEEEEcCCCCCCCCCcEEEEECCCC
Q 002047 228 RYGH-VMALVG-QRYLMAIGGNDGKRPLADVWALDTAAK 264 (975)
Q Consensus 228 R~~h-~~~~~~-~~~lyV~GG~~g~~~~ndv~~yDl~s~ 264 (975)
...- +++... +..+++.|+.++ .+..||+.+.
T Consensus 186 ~~~v~~~~~~~~~~~ll~~~~~dg-----~i~i~d~~~~ 219 (408)
T 4a11_B 186 RQEILAVSWSPRYDYILATASADS-----RVKLWDVRRA 219 (408)
T ss_dssp CSCEEEEEECSSCTTEEEEEETTS-----CEEEEETTCS
T ss_pred CCcEEEEEECCCCCcEEEEEcCCC-----cEEEEECCCC
Confidence 1112 222222 224777787665 5888888765
No 160
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=79.58 E-value=48 Score=35.38 Aligned_cols=132 Identities=12% Similarity=0.131 Sum_probs=61.8
Q ss_pred cEEEEECCCCcEEEecCCCCCCCCccceEEEEe-CCEEEEEeccCCCCCccccEEEEEcCCCCCcEEEEEecCCCCCCCc
Q 002047 151 DVHCYDVLTNKWSRITPFGEPPTPRAAHVATAV-GTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGPRY 229 (975)
Q Consensus 151 dv~~yD~~t~~W~~l~~~g~~P~pR~~hsa~~~-~~~iyv~GG~~~~~~~~~dv~~yD~~t~~~~W~~v~~~g~~P~~R~ 229 (975)
.+.+||..+..|........ .....-.+++.. ++.+++.|+. ...+.+||..+.. +..+... .....
T Consensus 39 ~i~iw~~~~~~~~~~~~~~~-~h~~~v~~~~~sp~g~~l~s~s~------D~~v~iw~~~~~~--~~~~~~~---~~h~~ 106 (345)
T 3fm0_A 39 RIRIWGTEGDSWICKSVLSE-GHQRTVRKVAWSPCGNYLASASF------DATTCIWKKNQDD--FECVTTL---EGHEN 106 (345)
T ss_dssp CEEEEEEETTEEEEEEEECS-SCSSCEEEEEECTTSSEEEEEET------TSCEEEEEECCC---EEEEEEE---CCCSS
T ss_pred eEEEEEcCCCcceeeeeecc-ccCCcEEEEEECCCCCEEEEEEC------CCcEEEEEccCCC--eEEEEEc---cCCCC
Confidence 56778888887754321100 011111122222 4466677764 3467788887653 5444321 11111
Q ss_pred c-cEEEEeCCcEEEEEcCCCCCCCCCcEEEEECCCCCcEEEEccCCCCCCCCcceeEEEEEeCCeEEEecCCCC
Q 002047 230 G-HVMALVGQRYLMAIGGNDGKRPLADVWALDTAAKPYEWRKLEPEGEGPPPCMYATASARSDGLLLLCGGRDA 302 (975)
Q Consensus 230 ~-h~~~~~~~~~lyV~GG~~g~~~~ndv~~yDl~s~~~~W~~v~~~~~~P~~r~~~~a~~~~~g~lyvfGG~~~ 302 (975)
. .+++...++.+++.|+.++ .+..||+.+.. .+..+....... ......+...++.+++.|+.++
T Consensus 107 ~v~~v~~sp~~~~l~s~s~D~-----~v~iwd~~~~~-~~~~~~~~~~h~--~~v~~~~~~p~~~~l~s~s~d~ 172 (345)
T 3fm0_A 107 EVKSVAWAPSGNLLATCSRDK-----SVWVWEVDEED-EYECVSVLNSHT--QDVKHVVWHPSQELLASASYDD 172 (345)
T ss_dssp CEEEEEECTTSSEEEEEETTS-----CEEEEEECTTS-CEEEEEEECCCC--SCEEEEEECSSSSCEEEEETTS
T ss_pred CceEEEEeCCCCEEEEEECCC-----eEEEEECCCCC-CeEEEEEecCcC--CCeEEEEECCCCCEEEEEeCCC
Confidence 1 2222333446777777664 57778876541 232222111100 1112222334667777777654
No 161
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=79.48 E-value=75 Score=37.91 Aligned_cols=199 Identities=11% Similarity=0.022 Sum_probs=97.7
Q ss_pred cEEEEECCCCcEEEecCCCCCCCCccceEEEEe-CC-EEEEEeccCCC---------CCccccEEEEEcCCCCCcEEEEE
Q 002047 151 DVHCYDVLTNKWSRITPFGEPPTPRAAHVATAV-GT-MVVIQGGIGPA---------GLSAEDLHVLDLTQQRPRWHRVV 219 (975)
Q Consensus 151 dv~~yD~~t~~W~~l~~~g~~P~pR~~hsa~~~-~~-~iyv~GG~~~~---------~~~~~dv~~yD~~t~~~~W~~v~ 219 (975)
.++++|+.+++....... .... .+.+.. ++ .||+....... ......+|++++.+...+-..+.
T Consensus 152 ~i~v~d~~tg~~~~~~~~----~~~~-~~~~wspDg~~l~~~~~~~~~~~~~~~~~~~~~~~~v~~~~l~t~~~~~~~v~ 226 (710)
T 2xdw_A 152 TIKFMKVDGAKELPDVLE----RVKF-SCMAWTHDGKGMFYNAYPQQDGKSDGTETSTNLHQKLYYHVLGTDQSEDILCA 226 (710)
T ss_dssp EEEEEETTTTEEEEEEEE----EECS-CCEEECTTSSEEEEEECCCCSSCCSSSCCCCCCCCEEEEEETTSCGGGCEEEE
T ss_pred EEEEEECCCCCCCccccc----Cccc-ceEEEEeCCCEEEEEEECCccccccccccccCCCCEEEEEECCCCcccceEEe
Confidence 799999999988765321 1111 122222 44 45444322110 02245699999987531112222
Q ss_pred ecCCCCCCCcccEEEEeCCcEEEEEcCCCCCCCCCcEEEEECCC------CCcEEEEccCCCCCCCCcceeEEEEEeCCe
Q 002047 220 VQGPGPGPRYGHVMALVGQRYLMAIGGNDGKRPLADVWALDTAA------KPYEWRKLEPEGEGPPPCMYATASARSDGL 293 (975)
Q Consensus 220 ~~g~~P~~R~~h~~~~~~~~~lyV~GG~~g~~~~ndv~~yDl~s------~~~~W~~v~~~~~~P~~r~~~~a~~~~~g~ 293 (975)
. ....+........-.+++.++++...+....+++|.+|+.+ ....|..+..... .........++.
T Consensus 227 -~-~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~l~~~~~-----~~~~~~s~dg~~ 299 (710)
T 2xdw_A 227 -E-FPDEPKWMGGAELSDDGRYVLLSIREGCDPVNRLWYCDLQQESNGITGILKWVKLIDNFE-----GEYDYVTNEGTV 299 (710)
T ss_dssp -C-CTTCTTCEEEEEECTTSCEEEEEEECSSSSCCEEEEEEGGGSSSSSCSSCCCEEEECSSS-----SCEEEEEEETTE
T ss_pred -c-cCCCCeEEEEEEEcCCCCEEEEEEEccCCCccEEEEEECcccccccCCccceEEeeCCCC-----cEEEEEeccCCE
Confidence 1 11112222333333333333333332222357899999975 3224666654322 112233445778
Q ss_pred EEEecCCCCCCCCccceEEeecCCCC--eEEEEECCCCCCCCcceeeEEEe-CCEEEEEcCcCCCCCccccCCcEEEEEC
Q 002047 294 LLLCGGRDASSVPLASAYGLAKHRDG--RWEWAIAPGVSPSPRYQHAAVFV-NARLHVSGGALGGGRMVEDSSSVAVLDT 370 (975)
Q Consensus 294 lyvfGG~~~~~~~l~d~~~~~~~~~~--~W~w~~~~g~~P~~R~~hs~v~~-~~~L~V~GG~~~~~~~~~~~~dv~~yD~ 370 (975)
||+.+..+. ....++.++..... .|+-.... .+. ..-.++... ++++++....++ ...|+++|+
T Consensus 300 l~~~s~~~~---~~~~l~~~d~~~~~~~~~~~l~~~--~~~-~~~~~~~~~~~~~lv~~~~~~g-------~~~l~~~~~ 366 (710)
T 2xdw_A 300 FTFKTNRHS---PNYRLINIDFTDPEESKWKVLVPE--HEK-DVLEWVACVRSNFLVLCYLHDV-------KNTLQLHDL 366 (710)
T ss_dssp EEEEECTTC---TTCEEEEEETTSCCGGGCEEEECC--CSS-CEEEEEEEETTTEEEEEEEETT-------EEEEEEEET
T ss_pred EEEEECCCC---CCCEEEEEeCCCCCcccceeccCC--CCC-CeEEEEEEEcCCEEEEEEEECC-------EEEEEEEEC
Confidence 888865432 23456666554332 35433222 111 122334455 678877765433 345899998
Q ss_pred CCCe
Q 002047 371 AAGV 374 (975)
Q Consensus 371 ~t~~ 374 (975)
.+++
T Consensus 367 ~~g~ 370 (710)
T 2xdw_A 367 ATGA 370 (710)
T ss_dssp TTCC
T ss_pred CCCC
Confidence 6654
No 162
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=79.26 E-value=65 Score=38.51 Aligned_cols=129 Identities=12% Similarity=0.088 Sum_probs=71.1
Q ss_pred EEEeCCEEEEEeccCCCCCccccEEEEEcCCCCCcEEEEEecCCC--CCCC---cccEEEEeCCcEEEEEcCCCCCCCCC
Q 002047 180 ATAVGTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPG--PGPR---YGHVMALVGQRYLMAIGGNDGKRPLA 254 (975)
Q Consensus 180 a~~~~~~iyv~GG~~~~~~~~~dv~~yD~~t~~~~W~~v~~~g~~--P~~R---~~h~~~~~~~~~lyV~GG~~g~~~~n 254 (975)
-++.+++||+... ...++.+|..+....|+.-...... +... ...+.++.++ +||+... + .
T Consensus 62 P~v~~g~vyv~~~-------~~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~v~v~~~-d-----g 127 (668)
T 1kv9_A 62 PLFHDGVIYTSMS-------WSRVIAVDAASGKELWRYDPEVAKVKARTSCCDAVNRGVALWGD-KVYVGTL-D-----G 127 (668)
T ss_dssp CEEETTEEEEEEG-------GGEEEEEETTTCCEEEEECCCCCGGGGGGCTTCSCCCCCEEEBT-EEEEECT-T-----S
T ss_pred CEEECCEEEEECC-------CCeEEEEECCCChhceEECCCCCccccccccccCCccceEEECC-EEEEEcC-C-----C
Confidence 3567889999865 2579999998877779864311100 0000 0122344555 7777532 2 4
Q ss_pred cEEEEECCCCCcEEEEccCCCCCCCCcceeEEEEEeCCeEEEecCCCCCCCCccceEEeecCCC-CeEEEEE
Q 002047 255 DVWALDTAAKPYEWRKLEPEGEGPPPCMYATASARSDGLLLLCGGRDASSVPLASAYGLAKHRD-GRWEWAI 325 (975)
Q Consensus 255 dv~~yDl~s~~~~W~~v~~~~~~P~~r~~~~a~~~~~g~lyvfGG~~~~~~~l~d~~~~~~~~~-~~W~w~~ 325 (975)
.++.||..+....|+.-..... .......+-++.++++|+..+... ...-..++.|+..+. ..|++..
T Consensus 128 ~l~alD~~tG~~~W~~~~~~~~--~~~~~~~~P~v~~~~v~vg~~~~~-~~~~g~v~a~D~~tG~~~W~~~~ 196 (668)
T 1kv9_A 128 RLIALDAKTGKAIWSQQTTDPA--KPYSITGAPRVVKGKVIIGNGGAE-YGVRGFVSAYDADTGKLAWRFYT 196 (668)
T ss_dssp EEEEEETTTCCEEEEEECSCTT--SSCBCCSCCEEETTEEEECCBCTT-TCCBCEEEEEETTTCCEEEEEES
T ss_pred EEEEEECCCCCEeeeeccCCCC--CcceecCCCEEECCEEEEeCCCCC-cCCCCEEEEEECCCCcEEEEecc
Confidence 7999999998889987543211 111112233456888877433211 112345777765432 2455443
No 163
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=79.17 E-value=7.5 Score=42.36 Aligned_cols=63 Identities=19% Similarity=0.225 Sum_probs=34.0
Q ss_pred CCEEEEEeccCCCCCccccEEEEEcCCCCCcEEEEEecCCCCCCCcccEEEEe--CCcEEEEEcCCCCCCCCCcEEEEEC
Q 002047 184 GTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGPRYGHVMALV--GQRYLMAIGGNDGKRPLADVWALDT 261 (975)
Q Consensus 184 ~~~iyv~GG~~~~~~~~~dv~~yD~~t~~~~W~~v~~~g~~P~~R~~h~~~~~--~~~~lyV~GG~~g~~~~ndv~~yDl 261 (975)
+++.++.|+. ...+.+||+.+.. -...- ......-.++.+ .++.+++.||.++ .+..||+
T Consensus 150 dg~~l~sgs~------dg~v~iwd~~~~~--~~~~~-----~~h~~~v~~v~~s~~~~~~~~s~~~dg-----~v~~wd~ 211 (357)
T 4g56_B 150 DGTQAVSGGK------DFSVKVWDLSQKA--VLKSY-----NAHSSEVNCVAACPGKDTIFLSCGEDG-----RILLWDT 211 (357)
T ss_dssp SSSEEEEEET------TSCEEEEETTTTE--EEEEE-----CCCSSCEEEEEECTTCSSCEEEEETTS-----CEEECCT
T ss_pred CCCEEEEEeC------CCeEEEEECCCCc--EEEEE-----cCCCCCEEEEEEccCCCceeeeeccCC-----ceEEEEC
Confidence 4466667764 3468899998753 21111 111111122222 2335777777664 4778888
Q ss_pred CCC
Q 002047 262 AAK 264 (975)
Q Consensus 262 ~s~ 264 (975)
.+.
T Consensus 212 ~~~ 214 (357)
T 4g56_B 212 RKP 214 (357)
T ss_dssp TSS
T ss_pred CCC
Confidence 765
No 164
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=78.99 E-value=86 Score=37.58 Aligned_cols=131 Identities=11% Similarity=0.072 Sum_probs=71.4
Q ss_pred EEEeCCEEEEEeccCCCCCccccEEEEEcCCCCCcEEEEEecCCC--CCCC---cccEEEEeCCcEEEEEcCCCCCCCCC
Q 002047 180 ATAVGTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPG--PGPR---YGHVMALVGQRYLMAIGGNDGKRPLA 254 (975)
Q Consensus 180 a~~~~~~iyv~GG~~~~~~~~~dv~~yD~~t~~~~W~~v~~~g~~--P~~R---~~h~~~~~~~~~lyV~GG~~g~~~~n 254 (975)
-++.+++||+... ...++.+|..+....|+.-...... +..+ ...+.++.++ .||+... + .
T Consensus 66 P~v~~g~vyv~~~-------~~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~g-~v~v~~~-d-----g 131 (689)
T 1yiq_A 66 PIVVDGVMYTTGP-------FSVVYALDARDGRLIWKYDPQSDRHRAGEACCDAVNRGVAVWKG-KVYVGVL-D-----G 131 (689)
T ss_dssp CEEETTEEEEECG-------GGCEEEEETTTCCEEEEECCCCCGGGGGGCTTCSCCCCCEEETT-EEEEECT-T-----S
T ss_pred CEEECCEEEEEcC-------CCeEEEEECCCCceeEEEcCCCCccccccccccCCCCccEEECC-EEEEEcc-C-----C
Confidence 3467889999765 3569999999877779864311100 0000 1122344555 7777542 2 4
Q ss_pred cEEEEECCCCCcEEEEccCCCCCCCCcceeEEEEEeCCeEEEecCCCCCCCCccceEEeecCCC-CeEEEEEC
Q 002047 255 DVWALDTAAKPYEWRKLEPEGEGPPPCMYATASARSDGLLLLCGGRDASSVPLASAYGLAKHRD-GRWEWAIA 326 (975)
Q Consensus 255 dv~~yDl~s~~~~W~~v~~~~~~P~~r~~~~a~~~~~g~lyvfGG~~~~~~~l~d~~~~~~~~~-~~W~w~~~ 326 (975)
.++.+|..+....|+.-..... .......++-++.++++|+..+... ...-..++.|+..+. ..|++...
T Consensus 132 ~l~AlDa~TG~~~W~~~~~~~~-~~~~~~~~sP~v~~g~v~vg~~~~~-~~~~g~v~a~D~~tG~~~W~~~~~ 202 (689)
T 1yiq_A 132 RLEAIDAKTGQRAWSVDTRADH-KRSYTITGAPRVVNGKVVIGNGGAE-FGVRGYVTAYDAETGKEAWRFYTV 202 (689)
T ss_dssp EEEEEETTTCCEEEEEECCSCT-TSCCBCCSCCEEETTEEEECCBCTT-TCCBCEEEEEETTTCCEEEEEESS
T ss_pred EEEEEECCCCCEeeeecCcCCC-CCCccccCCcEEECCEEEEEeCCCc-cCCCCEEEEEECCCCcEEEEeccc
Confidence 6999999998888987543111 0001112233456888877433211 112345777765532 24655433
No 165
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=78.68 E-value=7.3 Score=41.37 Aligned_cols=96 Identities=15% Similarity=0.168 Sum_probs=47.6
Q ss_pred CcEEEEECCCCcEEEecCCCCCCCCccceEEEEeC----CEEEEEeccCCCCCccccEEEEEcCCCCCcEEEEEecCCCC
Q 002047 150 ADVHCYDVLTNKWSRITPFGEPPTPRAAHVATAVG----TMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGP 225 (975)
Q Consensus 150 ~dv~~yD~~t~~W~~l~~~g~~P~pR~~hsa~~~~----~~iyv~GG~~~~~~~~~dv~~yD~~t~~~~W~~v~~~g~~P 225 (975)
..+.+||+.+.....+...+ ....-.+++... +.+++.|+. ...+.+||+.+.......+. +
T Consensus 44 ~~v~iw~~~~~~~~~~~~~~---~~~~v~~~~~~~~~~~~~~l~~~~~------dg~i~iwd~~~~~~~~~~~~--~--- 109 (357)
T 3i2n_A 44 GVIQLYEIQHGDLKLLREIE---KAKPIKCGTFGATSLQQRYLATGDF------GGNLHIWNLEAPEMPVYSVK--G--- 109 (357)
T ss_dssp EEEEEEEECSSSEEEEEEEE---ESSCEEEEECTTCCTTTCCEEEEET------TSCEEEECTTSCSSCSEEEC--C---
T ss_pred cEEEEEeCCCCcccceeeec---ccCcEEEEEEcCCCCCCceEEEecC------CCeEEEEeCCCCCccEEEEE--e---
Confidence 36788898887765443221 111112222222 366667764 35688999887531122222 0
Q ss_pred CCCcccEEEE------eCCcEEEEEcCCCCCCCCCcEEEEECCCC
Q 002047 226 GPRYGHVMAL------VGQRYLMAIGGNDGKRPLADVWALDTAAK 264 (975)
Q Consensus 226 ~~R~~h~~~~------~~~~~lyV~GG~~g~~~~ndv~~yDl~s~ 264 (975)
....-.++.. -.++.+++.|+.++ .+..||+.+.
T Consensus 110 ~~~~v~~~~~~~~~~~s~~~~~l~~~~~d~-----~i~vwd~~~~ 149 (357)
T 3i2n_A 110 HKEIINAIDGIGGLGIGEGAPEIVTGSRDG-----TVKVWDPRQK 149 (357)
T ss_dssp CSSCEEEEEEESGGGCC-CCCEEEEEETTS-----CEEEECTTSC
T ss_pred cccceEEEeeccccccCCCccEEEEEeCCC-----eEEEEeCCCC
Confidence 0011111111 12224666776654 5888898876
No 166
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=78.64 E-value=41 Score=36.55 Aligned_cols=26 Identities=15% Similarity=0.252 Sum_probs=18.5
Q ss_pred CCEEEEEcCcCCCCCccccCCcEEEEECCCCeEEE
Q 002047 343 NARLHVSGGALGGGRMVEDSSSVAVLDTAAGVWCD 377 (975)
Q Consensus 343 ~~~L~V~GG~~~~~~~~~~~~dv~~yD~~t~~W~~ 377 (975)
++.+++.|+.++ .|.++|+.+..-..
T Consensus 260 ~~~~l~s~s~D~---------~i~lwd~~~~~~~~ 285 (380)
T 3iz6_a 260 DGQRFGTGSDDG---------TCRLFDMRTGHQLQ 285 (380)
T ss_dssp TSSEEEEECSSS---------CEEEEETTTTEEEE
T ss_pred CCCeEEEEcCCC---------eEEEEECCCCcEEE
Confidence 567788887643 37889999876544
No 167
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=78.31 E-value=9.7 Score=42.59 Aligned_cols=97 Identities=9% Similarity=0.018 Sum_probs=49.3
Q ss_pred cEEEEECCCCcEEEecCCCCCCCCccceEEEEe--CCEEEEEeccCCCCCccccEEEEEcCCCCCcEEEEEecCCCCCCC
Q 002047 151 DVHCYDVLTNKWSRITPFGEPPTPRAAHVATAV--GTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGPR 228 (975)
Q Consensus 151 dv~~yD~~t~~W~~l~~~g~~P~pR~~hsa~~~--~~~iyv~GG~~~~~~~~~dv~~yD~~t~~~~W~~v~~~g~~P~~R 228 (975)
.|.+||+.+.....+.... .....=.+++.. ++.+++.|+. ...+.+||+.+.. ...+.... ....
T Consensus 143 ~i~lWd~~~~~~~~~~~~~--gH~~~V~~l~f~p~~~~~l~s~s~------D~~v~iwd~~~~~--~~~~~~~~--~~~~ 210 (435)
T 4e54_B 143 DIMLWNFGIKDKPTFIKGI--GAGGSITGLKFNPLNTNQFYASSM------EGTTRLQDFKGNI--LRVFASSD--TINI 210 (435)
T ss_dssp CEEEECSSCCSCCEEECCC--SSSCCCCEEEECSSCTTEEEEECS------SSCEEEEETTSCE--EEEEECCS--SCSC
T ss_pred EEEEEECCCCCceeEEEcc--CCCCCEEEEEEeCCCCCEEEEEeC------CCEEEEeeccCCc--eeEEeccC--CCCc
Confidence 6778888766533332210 011111222322 3456666664 3468899997752 33333111 1112
Q ss_pred cccEEEEeCCcEEEEEcCCCCCCCCCcEEEEECCCC
Q 002047 229 YGHVMALVGQRYLMAIGGNDGKRPLADVWALDTAAK 264 (975)
Q Consensus 229 ~~h~~~~~~~~~lyV~GG~~g~~~~ndv~~yDl~s~ 264 (975)
.-.++....++.+++.|+.++ .|..||+...
T Consensus 211 ~~~~~~~~~~~~~l~~g~~dg-----~i~~wd~~~~ 241 (435)
T 4e54_B 211 WFCSLDVSASSRMVVTGDNVG-----NVILLNMDGK 241 (435)
T ss_dssp CCCCEEEETTTTEEEEECSSS-----BEEEEESSSC
T ss_pred cEEEEEECCCCCEEEEEeCCC-----cEeeeccCcc
Confidence 222333444446788887765 5788888655
No 168
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=77.76 E-value=56 Score=35.19 Aligned_cols=94 Identities=13% Similarity=0.116 Sum_probs=46.8
Q ss_pred cEEEEECCCCcEEEecCCCCCCCCccceEEEEe--CCEEEEEeccCCCCCccccEEEEEcCCCCCcEEEEEecCCCCCCC
Q 002047 151 DVHCYDVLTNKWSRITPFGEPPTPRAAHVATAV--GTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGPR 228 (975)
Q Consensus 151 dv~~yD~~t~~W~~l~~~g~~P~pR~~hsa~~~--~~~iyv~GG~~~~~~~~~dv~~yD~~t~~~~W~~v~~~g~~P~~R 228 (975)
.+.++|+.+++-...-.. ..... .+++.. +..+++.|+. ...+.+||+.+.. .-..+. .....
T Consensus 150 ~i~iwd~~~~~~~~~~~~---h~~~V-~~~~~~~~~~~~l~s~s~------D~~v~iwd~~~~~-~~~~~~----~~~~~ 214 (344)
T 4gqb_B 150 CIKVWDLAQQVVLSSYRA---HAAQV-TCVAASPHKDSVFLSCSE------DNRILLWDTRCPK-PASQIG----CSAPG 214 (344)
T ss_dssp CEEEEETTTTEEEEEECC---CSSCE-EEEEECSSCTTEEEEEET------TSCEEEEETTSSS-CEEECC--------C
T ss_pred eEEEEECCCCcEEEEEcC---cCCce-EEEEecCCCCCceeeecc------ccccccccccccc-eeeeee----cceee
Confidence 578889887754332111 11111 122222 2357777764 3568899998753 122221 11111
Q ss_pred cccEEEEe--CCcEEEEEcCCCCCCCCCcEEEEECCCC
Q 002047 229 YGHVMALV--GQRYLMAIGGNDGKRPLADVWALDTAAK 264 (975)
Q Consensus 229 ~~h~~~~~--~~~~lyV~GG~~g~~~~ndv~~yDl~s~ 264 (975)
....++.+ .+..+++.|+.++ .|..||+.+.
T Consensus 215 ~~~~~~~~~p~~~~~l~sg~~dg-----~v~~wd~~~~ 247 (344)
T 4gqb_B 215 YLPTSLAWHPQQSEVFVFGDENG-----TVSLVDTKST 247 (344)
T ss_dssp CCEEEEEECSSCTTEEEEEETTS-----EEEEEESCC-
T ss_pred ccceeeeecCCCCcceEEeccCC-----cEEEEECCCC
Confidence 11122222 2346888887664 5888999776
No 169
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=77.72 E-value=37 Score=40.56 Aligned_cols=243 Identities=11% Similarity=-0.001 Sum_probs=114.8
Q ss_pred cCcEEEEECCCCcEEEecCCCCCCC-CccceEEEEe--CCEEEEEeccCCCCCccccEEEEEcCCCCCcEEEEEecCCCC
Q 002047 149 TADVHCYDVLTNKWSRITPFGEPPT-PRAAHVATAV--GTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGP 225 (975)
Q Consensus 149 ~~dv~~yD~~t~~W~~l~~~g~~P~-pR~~hsa~~~--~~~iyv~GG~~~~~~~~~dv~~yD~~t~~~~W~~v~~~g~~P 225 (975)
...+|+.+.....|+.+......-. .........+ +++.++|.-.. .+....+++++|+.+.. ... ...++
T Consensus 93 ~~~l~~~~~~~~~~~~l~d~~~~a~~~~~~~~~~~~SPDG~~la~~~~~-~G~~~~~i~v~dl~tg~--~~~---~~~~~ 166 (695)
T 2bkl_A 93 KAILYWRQGESGQEKVLLDPNGWSKDGTVSLGTWAVSWDGKKVAFAQKP-NAADEAVLHVIDVDSGE--WSK---VDVIE 166 (695)
T ss_dssp SCEEEEEESTTSCCEEEECGGGSSSSSCEEEEEEEECTTSSEEEEEEEE-TTCSCCEEEEEETTTCC--BCS---SCCBS
T ss_pred EEEEEEEcCCCCCcEEEEchHHhccCCCEEEEEEEECCCCCEEEEEECC-CCCceEEEEEEECCCCC--CcC---CcccC
Confidence 4578888888888888754211000 0111222222 44544443321 12224689999998864 320 11222
Q ss_pred CCCcccEEEEeCCcEEEEEcCCCCC--------CCCCcEEEEECCCCCcEEEEccCCCCCCCCcceeEEEEEeCCeEEEe
Q 002047 226 GPRYGHVMALVGQRYLMAIGGNDGK--------RPLADVWALDTAAKPYEWRKLEPEGEGPPPCMYATASARSDGLLLLC 297 (975)
Q Consensus 226 ~~R~~h~~~~~~~~~lyV~GG~~g~--------~~~ndv~~yDl~s~~~~W~~v~~~~~~P~~r~~~~a~~~~~g~lyvf 297 (975)
.... ...+...+++.++++..+.. .....+|++++.+..-.-..+..... .+..........+|+.+++
T Consensus 167 ~~~~-~~~~wspDg~~l~~~~~d~~~~~~~~~~~~~~~v~~~~l~t~~~~~~lv~~~~~--~~~~~~~~~~SpDG~~l~~ 243 (695)
T 2bkl_A 167 GGKY-ATPKWTPDSKGFYYEWLPTDPSIKVDERPGYTTIRYHTLGTEPSKDTVVHERTG--DPTTFLQSDLSRDGKYLFV 243 (695)
T ss_dssp CCTT-CCCEECTTSSEEEEEECCCCTTSCGGGGGGGCEEEEEETTSCGGGCEEEECCCC--CTTCEEEEEECTTSCCEEE
T ss_pred cccc-cceEEecCCCEEEEEEecCCCCCccccCCCCCEEEEEECCCCchhceEEEecCC--CCEEEEEEEECCCCCEEEE
Confidence 2221 23334344455566555432 23556999999876211122221111 1112333334455655555
Q ss_pred cCCCCCCCCccceEEeecCCCCeEEEEECCCCCCCCcceeeEEEeCCEEEEEcCcCCCCCccccCCcEEEEECCCCe---
Q 002047 298 GGRDASSVPLASAYGLAKHRDGRWEWAIAPGVSPSPRYQHAAVFVNARLHVSGGALGGGRMVEDSSSVAVLDTAAGV--- 374 (975)
Q Consensus 298 GG~~~~~~~l~d~~~~~~~~~~~W~w~~~~g~~P~~R~~hs~v~~~~~L~V~GG~~~~~~~~~~~~dv~~yD~~t~~--- 374 (975)
...... ..+.+|.++.. ++.|..+.... . .....+..++.+|+....+. ....|+++|+.+..
T Consensus 244 ~~~~~~--~~~~l~~~~~~-~~~~~~l~~~~----~-~~~~~~~~~g~l~~~s~~~~------~~~~l~~~d~~~~~~~~ 309 (695)
T 2bkl_A 244 YILRGW--SENDVYWKRPG-EKDFRLLVKGV----G-AKYEVHAWKDRFYVLTDEGA------PRQRVFEVDPAKPARAS 309 (695)
T ss_dssp EEEETT--TEEEEEEECTT-CSSCEEEEECS----S-CCEEEEEETTEEEEEECTTC------TTCEEEEEBTTBCSGGG
T ss_pred EEeCCC--CceEEEEEcCC-CCceEEeecCC----C-ceEEEEecCCcEEEEECCCC------CCCEEEEEeCCCCCccC
Confidence 443321 23566666432 33454433221 1 11222335666666543321 13569999998765
Q ss_pred EEEcccCcCCCCCCCCccccCCCCCccCCCccceeEEEEECCEEEEEcCCCCCCCccceEeeec
Q 002047 375 WCDTKSVVTSPRTGRYSADAAGGDAAVELTRRCRHAAAAVGDLIFIYGGLRGGVLLDDLLVAED 438 (975)
Q Consensus 375 W~~v~~~~~~p~~~~~~~~~~~~~~~~~p~~R~~hsa~~~~~~LyV~GG~~~~~~l~Dv~~ld~ 438 (975)
|..+..... ...-......+++|++....++ ..-+|.+++
T Consensus 310 ~~~l~~~~~---------------------~~~l~~~~~~~~~lv~~~~~dg---~~~l~~~~~ 349 (695)
T 2bkl_A 310 WKEIVPEDS---------------------SASLLSVSIVGGHLSLEYLKDA---TSEVRVATL 349 (695)
T ss_dssp CEEEECCCS---------------------SCEEEEEEEETTEEEEEEEETT---EEEEEEEET
T ss_pred CeEEecCCC---------------------CCeEEEEEEECCEEEEEEEECC---EEEEEEEeC
Confidence 776653310 1111223344888877765443 234666664
No 170
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=77.67 E-value=58 Score=38.22 Aligned_cols=202 Identities=12% Similarity=-0.000 Sum_probs=101.6
Q ss_pred cCcEEEEECCC------CcEEEec-CCCCCCCCccceEEEEeCCEEEEEeccCCCCC--ccccEEEEEcC-CCC-CcEEE
Q 002047 149 TADVHCYDVLT------NKWSRIT-PFGEPPTPRAAHVATAVGTMVVIQGGIGPAGL--SAEDLHVLDLT-QQR-PRWHR 217 (975)
Q Consensus 149 ~~dv~~yD~~t------~~W~~l~-~~g~~P~pR~~hsa~~~~~~iyv~GG~~~~~~--~~~dv~~yD~~-t~~-~~W~~ 217 (975)
..+++.+|+.+ ...+.+. .. + ......+..-+++.+++........ ...++|++|+. +.. .+...
T Consensus 160 ~~~i~~~~~~~~~~~~~~~~~~l~~~~---~-~~~~~~~~SpDG~~la~~~~~~~~~~~~~~~i~~~d~~~~g~~~~~~~ 235 (662)
T 3azo_A 160 RRFLAAVPLDGSAAADRSAVRELSDDA---H-RFVTGPRLSPDGRQAVWLAWDHPRMPWEGTELKTARVTEDGRFADTRT 235 (662)
T ss_dssp EEEEEEEETTSTTTTCGGGSEESSCSC---S-SEECCCEECTTSSEEEEEEECTTCCTTTCEEEEEEEECTTSCEEEEEE
T ss_pred eeEEEEEECCCCccccCCceeEEEecC---C-CcccCceECCCCCEEEEEECCCCCCCCCCcEEEEEEECCCCcccccEE
Confidence 35899999988 6766665 32 1 1111112222444344433222111 23579999998 431 02334
Q ss_pred EEecCCCCCCCcccEEEEeCCcEEEEEcCCCCCCCCCcEEEEECCCCCcEEEEccCCCCCC---CCcc-eeEEEEEeCCe
Q 002047 218 VVVQGPGPGPRYGHVMALVGQRYLMAIGGNDGKRPLADVWALDTAAKPYEWRKLEPEGEGP---PPCM-YATASARSDGL 293 (975)
Q Consensus 218 v~~~g~~P~~R~~h~~~~~~~~~lyV~GG~~g~~~~ndv~~yDl~s~~~~W~~v~~~~~~P---~~r~-~~~a~~~~~g~ 293 (975)
+... . ...-.......++++|+.+..++ ...+|++|+.+. +|+.+....... .-.. ....+...+++
T Consensus 236 l~~~---~-~~~~~~~~~spdg~l~~~~~~~~---~~~l~~~~~~~~--~~~~l~~~~~~~~~p~w~~~~~~~~~~~~~~ 306 (662)
T 3azo_A 236 LLGG---P-EEAIAQAEWAPDGSLIVATDRTG---WWNLHRVDPATG--AATQLCRREEEFAGPLWTPGMRWFAPLANGL 306 (662)
T ss_dssp EEEE---T-TBCEEEEEECTTSCEEEEECTTS---SCEEEEECTTTC--CEEESSCCSSBSSCCCCSTTCCSEEECTTSC
T ss_pred eCCC---C-CceEcceEECCCCeEEEEECCCC---CeEEEEEECCCC--ceeecccccccccCccccccCceEeEeCCCE
Confidence 4311 0 11122233333445777766543 347999999888 888876532210 0000 11122234677
Q ss_pred EEEecCCCCCCCCccceEEeecCCCCeEEEEECCCCCCCCcceeeE-EEeCCEEEEEcCcCCCCCccccCCcEEEEECCC
Q 002047 294 LLLCGGRDASSVPLASAYGLAKHRDGRWEWAIAPGVSPSPRYQHAA-VFVNARLHVSGGALGGGRMVEDSSSVAVLDTAA 372 (975)
Q Consensus 294 lyvfGG~~~~~~~l~d~~~~~~~~~~~W~w~~~~g~~P~~R~~hs~-v~~~~~L~V~GG~~~~~~~~~~~~dv~~yD~~t 372 (975)
+++.+.. + ...+|.++.... . ...+... .. ...+. ..-++.+++..+... ....+|.+|+.+
T Consensus 307 ~~~~~~~-~----~~~l~~~d~~~~-~--~~~l~~~--~~-~~~~~~s~~~~~~~~~~~~~~------~~~~i~~~d~~~ 369 (662)
T 3azo_A 307 IAVVHGK-G----AAVLGILDPESG-E--LVDAAGP--WT-EWAATLTVSGTRAVGVAASPR------TAYEVVELDTVT 369 (662)
T ss_dssp EEEEEBS-S----SCEEEEEETTTT-E--EEECCSS--CC-EEEEEEEEETTEEEEEEEETT------EEEEEEEEETTT
T ss_pred EEEEEEc-C----ccEEEEEECCCC-c--EEEecCC--CC-eEEEEEecCCCEEEEEEcCCC------CCCEEEEEECCC
Confidence 7776654 2 345676665433 3 2333321 11 11223 344666666544321 145699999999
Q ss_pred CeEEEccc
Q 002047 373 GVWCDTKS 380 (975)
Q Consensus 373 ~~W~~v~~ 380 (975)
.+...+..
T Consensus 370 g~~~~l~~ 377 (662)
T 3azo_A 370 GRARTIGA 377 (662)
T ss_dssp CCEEEEES
T ss_pred CceEEeec
Confidence 98877754
No 171
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=76.92 E-value=75 Score=33.11 Aligned_cols=102 Identities=17% Similarity=0.127 Sum_probs=49.6
Q ss_pred CcEEEEECCCCcEEEecCCCCCCC--CccceEEEEe-CC-EEEEEecc--CCCC---CccccEEEEEcCCCCC--cEEEE
Q 002047 150 ADVHCYDVLTNKWSRITPFGEPPT--PRAAHVATAV-GT-MVVIQGGI--GPAG---LSAEDLHVLDLTQQRP--RWHRV 218 (975)
Q Consensus 150 ~dv~~yD~~t~~W~~l~~~g~~P~--pR~~hsa~~~-~~-~iyv~GG~--~~~~---~~~~dv~~yD~~t~~~--~W~~v 218 (975)
..++.||+.+.+.......+..+. ...-+.++.. ++ .+|+.+.. .... .....+++||+.+... .....
T Consensus 65 ~~i~~~d~~t~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~ 144 (349)
T 1jmx_B 65 GDIYGIDLDTCKNTFHANLSSVPGEVGRSMYSFAISPDGKEVYATVNPTQRLNDHYVVKPPRLEVFSTADGLEAKPVRTF 144 (349)
T ss_dssp TEEEEEETTTTEEEEEEESCCSTTEEEECSSCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEEGGGGGGBCCSEEE
T ss_pred CcEEEEeCCCCcEEEEEEcccccccccccccceEECCCCCEEEEEcccccccccccccCCCeEEEEECCCccccceeeec
Confidence 478999999887654322211110 1112333333 33 56665421 0000 0125799999886310 01111
Q ss_pred EecCCCCCCCcccEEEEeCCcEEEEEcCCCCCCCCCcEEEEECCCCC
Q 002047 219 VVQGPGPGPRYGHVMALVGQRYLMAIGGNDGKRPLADVWALDTAAKP 265 (975)
Q Consensus 219 ~~~g~~P~~R~~h~~~~~~~~~lyV~GG~~g~~~~ndv~~yDl~s~~ 265 (975)
. .++.-++++...++++|+.++ ++++||+.+..
T Consensus 145 ----~--~~~~~~~~~~s~dg~l~~~~~--------~i~~~d~~~~~ 177 (349)
T 1jmx_B 145 ----P--MPRQVYLMRAADDGSLYVAGP--------DIYKMDVKTGK 177 (349)
T ss_dssp ----E--CCSSCCCEEECTTSCEEEESS--------SEEEECTTTCC
T ss_pred ----c--CCCcccceeECCCCcEEEccC--------cEEEEeCCCCc
Confidence 1 122233444444446777432 49999998773
No 172
>3ztv_A NAD nucleotidase, NADN; hydrolase, NAD pyrophosphatase, NMN nucleotidase, periplasmi enzyme, CD73; HET: ADN; 1.30A {Haemophilus influenzae} PDB: 3zu0_A*
Probab=76.82 E-value=2 Score=51.09 Aligned_cols=68 Identities=16% Similarity=0.094 Sum_probs=41.7
Q ss_pred cCCEEEEecCCCCHH---------------------HHHHHHHHhCCCCCCCCccceeEEEeccccCCCC-----ChHHH
Q 002047 697 KAPIKIFGDLHGQFG---------------------DLMRLFDEYGSPSTAGDIAYIDYLFLGDYVDRGQ-----HSLET 750 (975)
Q Consensus 697 ~~~i~vvGDiHG~~~---------------------~L~~ll~~~g~~~~~~~~~~~~~vfLGDyVDRG~-----~s~ev 750 (975)
+.+|+.+.|+||++. .|..+++.+.-...+ .-+|..||.++..+ ....+
T Consensus 12 ~l~Il~tnD~Hg~~~~~~~~~~~~~~~~~~~~gG~arla~~i~~~r~~~~~-----~l~l~~GD~~~gs~~~~~~~g~~~ 86 (579)
T 3ztv_A 12 ELSILHINDHHSYLEPHETRINLNGQQTKVDIGGFSAVNAKLNKLRKKYKN-----PLVLHAGDAITGTLYFTLFGGSAD 86 (579)
T ss_dssp EEEEEEECCCTTCCSCEEEEEEETTEEEEEEECCHHHHHHHHHHHHHHSSS-----EEEEECSCCSCSSHHHHTTTTHHH
T ss_pred EEEEEEeCccccCccCCccccccCCcccccccCCHHHHHHHHHHHHhhCCC-----EEEEeCCCCCCCceeeeecCCHHH
Confidence 456899999999853 344455544211111 14666899999763 23445
Q ss_pred HHHHHHhhhcCCCCEEEEeccccc
Q 002047 751 ITLLLALKVEYPNNVHLIRGNHEA 774 (975)
Q Consensus 751 l~ll~~lk~~~P~~v~llrGNHE~ 774 (975)
+.+|-.+. --++..||||.
T Consensus 87 ~~~ln~lg-----~D~~tlGNHEf 105 (579)
T 3ztv_A 87 AAVMNAGN-----FHYFTLGNHEF 105 (579)
T ss_dssp HHHHHHHT-----CSEEECCSGGG
T ss_pred HHHHHhcC-----cCeeecccccc
Confidence 66666653 22466899995
No 173
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=76.69 E-value=31 Score=36.67 Aligned_cols=164 Identities=13% Similarity=0.112 Sum_probs=78.7
Q ss_pred CCEEEEEeccCCCCCccccEEEEEcCCCCCcEEEEEecCCCCCCCcccEEEEe-CCcEEEEEcCCCCCCCCCcEEEEECC
Q 002047 184 GTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGPRYGHVMALV-GQRYLMAIGGNDGKRPLADVWALDTA 262 (975)
Q Consensus 184 ~~~iyv~GG~~~~~~~~~dv~~yD~~t~~~~W~~v~~~g~~P~~R~~h~~~~~-~~~~lyV~GG~~g~~~~ndv~~yDl~ 262 (975)
++..++.|+. ...+.+||+......+..+... ......-..+.+ .++.+++.|+.++ .+..+|..
T Consensus 118 ~g~~las~s~------D~~v~iwd~~~~~~~~~~~~~~---~~h~~~v~~v~~~p~~~~l~s~s~D~-----~i~iW~~~ 183 (330)
T 2hes_X 118 DGYYLATCSR------DKSVWIWETDESGEEYECISVL---QEHSQDVKHVIWHPSEALLASSSYDD-----TVRIWKDY 183 (330)
T ss_dssp TSCEEEEEET------TSCEEEEECCTTCCCCEEEEEE---CCCSSCEEEEEECSSSSEEEEEETTS-----CEEEEEEE
T ss_pred CCCEEEEEeC------CCEEEEEeccCCCCCeEEEEEe---ccCCCceEEEEECCCCCEEEEEcCCC-----eEEEEECC
Confidence 3466666664 3568899985432235544321 111111222223 3335777777765 56777777
Q ss_pred CCCcEEEEccCCCCCCCCcceeEEEEE-eC--CeEEEecCCCCCCCCccceEEeecC---CCCeEEEEECCCCCCCCcce
Q 002047 263 AKPYEWRKLEPEGEGPPPCMYATASAR-SD--GLLLLCGGRDASSVPLASAYGLAKH---RDGRWEWAIAPGVSPSPRYQ 336 (975)
Q Consensus 263 s~~~~W~~v~~~~~~P~~r~~~~a~~~-~~--g~lyvfGG~~~~~~~l~d~~~~~~~---~~~~W~w~~~~g~~P~~R~~ 336 (975)
+. .|..+....... ... .++.. .+ +..++.|+.++. -.+|.+... ....|........ .....-
T Consensus 184 ~~--~~~~~~~~~~h~-~~v--~~~~~~~~~~~~~l~s~s~D~~----v~iw~~~~~~~~~~~~~~~~~~~~~-~h~~~v 253 (330)
T 2hes_X 184 DD--DWECVAVLNGHE-GTV--WSSDFDKTEGVFRLCSGSDDST----VRVWKYMGDDEDDQQEWVCEAILPD-VHKRQV 253 (330)
T ss_dssp TT--EEEEEEEECCCS-SCE--EEEEECCSSSSCEEEEEETTSC----EEEEEEEEECTTSCEEEEEEEECCS-CCSSCE
T ss_pred CC--CeeEEEEccCCC-CcE--EEEEecCCCCeeEEEEEeCCCe----EEEEEecCCCccccceeEEeeeccc-ccccce
Confidence 66 676554332110 011 11222 22 455666665532 234444321 1112322221111 022223
Q ss_pred eeEEEeCCEEEEEcCcCCCCCccccCCcEEEEECCCCeEEEccc
Q 002047 337 HAAVFVNARLHVSGGALGGGRMVEDSSSVAVLDTAAGVWCDTKS 380 (975)
Q Consensus 337 hs~v~~~~~L~V~GG~~~~~~~~~~~~dv~~yD~~t~~W~~v~~ 380 (975)
.++++..+.+++.||.++ .|.+||..+..|..+..
T Consensus 254 ~~v~~s~~~~l~s~~~dg---------~v~iw~~~~~~~~~~~~ 288 (330)
T 2hes_X 254 YNVAWGFNGLIASVGADG---------VLAVYEEVDGEWKVFAK 288 (330)
T ss_dssp EEEEECTTSCEEEEETTS---------CEEEEEEETTEEEEEEE
T ss_pred EEEEEcCCCEEEEEeCCC---------EEEEEEcCCCceEEEec
Confidence 344444555677777543 37788888888866543
No 174
>3ive_A Nucleotidase; structural genomics, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics, nysgxrc; HET: CTN; 1.70A {Escherichia coli O6} PDB: 3ivd_A*
Probab=76.58 E-value=1.3 Score=51.81 Aligned_cols=66 Identities=23% Similarity=0.348 Sum_probs=37.5
Q ss_pred CCEEEEecCCCCH------------------HHHHHHHHHhCCCCCCCCccceeEEE-eccccCCCCC-----hHHHHHH
Q 002047 698 APIKIFGDLHGQF------------------GDLMRLFDEYGSPSTAGDIAYIDYLF-LGDYVDRGQH-----SLETITL 753 (975)
Q Consensus 698 ~~i~vvGDiHG~~------------------~~L~~ll~~~g~~~~~~~~~~~~~vf-LGDyVDRG~~-----s~evl~l 753 (975)
.+|+.+.|+||++ ..|..+++.+.-...+ .+++ .||.++.... ...++.+
T Consensus 7 l~Il~tnD~Hg~~~~~~~~~~~~~~~~~gG~a~la~~i~~~r~~~~~------~llldaGD~~~g~~~~~~~~g~~~~~~ 80 (509)
T 3ive_A 7 VTIIYTNDLHAHVEPYKVPWIADGKRDIGGWANITTLVKQEKAKNKA------TWFFDAGDYFTGPYISSLTKGKAIIDI 80 (509)
T ss_dssp EEEEEECCCTTCCSCBCCTTSGGGTSCBCCHHHHHHHHHHHHHHCSS------EEEEECSCCSSSSHHHHTTTTHHHHHH
T ss_pred EEEEEEccccCCccCcccccccCCCcCcCCHHHHHHHHHHHHhcCCC------eEEEECCCCCCCchhhhhcCChHHHHH
Confidence 4688999999974 3445555544221111 3444 8999984321 2334444
Q ss_pred HHHhhhcCCCCEEEEeccccc
Q 002047 754 LLALKVEYPNNVHLIRGNHEA 774 (975)
Q Consensus 754 l~~lk~~~P~~v~llrGNHE~ 774 (975)
|-.+. --++..||||.
T Consensus 81 ln~lg-----~D~~tlGNHEf 96 (509)
T 3ive_A 81 MNTMP-----FDAVTIGNHEF 96 (509)
T ss_dssp HTTSC-----CSEECCCGGGG
T ss_pred HHhcC-----CcEEeeccccc
Confidence 44431 23456799995
No 175
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=76.22 E-value=84 Score=33.30 Aligned_cols=138 Identities=14% Similarity=0.076 Sum_probs=65.2
Q ss_pred ccEEEEEcCCCCCcEEEEEecCCCCCCCcccEEEEeCCcEEEEEcCCCCCCCCCcEEEEECCCCCcEEEEccCCCCCCCC
Q 002047 201 EDLHVLDLTQQRPRWHRVVVQGPGPGPRYGHVMALVGQRYLMAIGGNDGKRPLADVWALDTAAKPYEWRKLEPEGEGPPP 280 (975)
Q Consensus 201 ~dv~~yD~~t~~~~W~~v~~~g~~P~~R~~h~~~~~~~~~lyV~GG~~g~~~~ndv~~yDl~s~~~~W~~v~~~~~~P~~ 280 (975)
..+.+||+.+.. -...- .+ ....-.+++...++.+++.|+.++ .+..||+.+. +-...-....
T Consensus 164 ~~i~~wd~~~~~--~~~~~-~~---h~~~v~~~~~~~~~~~l~sg~~d~-----~v~~wd~~~~--~~~~~~~~h~---- 226 (340)
T 1got_B 164 TTCALWDIETGQ--QTTTF-TG---HTGDVMSLSLAPDTRLFVSGACDA-----SAKLWDVREG--MCRQTFTGHE---- 226 (340)
T ss_dssp SCEEEEETTTTE--EEEEE-CC---CSSCEEEEEECTTSSEEEEEETTS-----CEEEEETTTC--SEEEEECCCS----
T ss_pred CcEEEEECCCCc--EEEEE-cC---CCCceEEEEECCCCCEEEEEeCCC-----cEEEEECCCC--eeEEEEcCCc----
Confidence 568899998752 21111 11 111112333334446788887765 5888898776 2221111101
Q ss_pred cceeEEEEEeCCeEEEecCCCCCCCCccceEEeecCCCCeEEEEECCCCCCCCcce-eeEEEe-CCEEEEEcCcCCCCCc
Q 002047 281 CMYATASARSDGLLLLCGGRDASSVPLASAYGLAKHRDGRWEWAIAPGVSPSPRYQ-HAAVFV-NARLHVSGGALGGGRM 358 (975)
Q Consensus 281 r~~~~a~~~~~g~lyvfGG~~~~~~~l~d~~~~~~~~~~~W~w~~~~g~~P~~R~~-hs~v~~-~~~L~V~GG~~~~~~~ 358 (975)
......+...++.+++.|+.++. +..++.... .-...... +..... .++++. ++.+++.|+.+
T Consensus 227 ~~v~~v~~~p~~~~l~s~s~d~~------v~iwd~~~~-~~~~~~~~---~~~~~~v~~~~~s~~g~~l~~g~~d----- 291 (340)
T 1got_B 227 SDINAICFFPNGNAFATGSDDAT------CRLFDLRAD-QELMTYSH---DNIICGITSVSFSKSGRLLLAGYDD----- 291 (340)
T ss_dssp SCEEEEEECTTSSEEEEEETTSC------EEEEETTTT-EEEEEECC---TTCCSCEEEEEECTTSSEEEEEETT-----
T ss_pred CCEEEEEEcCCCCEEEEEcCCCc------EEEEECCCC-cEEEEEcc---CCcccceEEEEECCCCCEEEEECCC-----
Confidence 11222233346778888876543 223333222 11111111 111111 222232 56777777653
Q ss_pred cccCCcEEEEECCCCe
Q 002047 359 VEDSSSVAVLDTAAGV 374 (975)
Q Consensus 359 ~~~~~dv~~yD~~t~~ 374 (975)
..|.+||..+..
T Consensus 292 ----~~i~vwd~~~~~ 303 (340)
T 1got_B 292 ----FNCNVWDALKAD 303 (340)
T ss_dssp ----SEEEEEETTTCC
T ss_pred ----CeEEEEEcccCc
Confidence 348889987654
No 176
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=76.18 E-value=95 Score=33.95 Aligned_cols=103 Identities=10% Similarity=-0.059 Sum_probs=52.1
Q ss_pred cEEEEECCCCcEEEecCCCCCCCCccceEEEE-eCCEEEEEeccC---CCCCccccEEEEEcCCCCCcEEEEEecCC-CC
Q 002047 151 DVHCYDVLTNKWSRITPFGEPPTPRAAHVATA-VGTMVVIQGGIG---PAGLSAEDLHVLDLTQQRPRWHRVVVQGP-GP 225 (975)
Q Consensus 151 dv~~yD~~t~~W~~l~~~g~~P~pR~~hsa~~-~~~~iyv~GG~~---~~~~~~~dv~~yD~~t~~~~W~~v~~~g~-~P 225 (975)
.++.||+.+++-...- |.....+-+.. .+..+|+..-.. ..+...+.+.+||+.+.. ....++..+. .+
T Consensus 48 ~v~v~D~~t~~~~~~i-----~~g~~p~i~~spDg~~lyv~n~~~~~~~rg~~~~~v~viD~~t~~-~~~~i~~~~~~~~ 121 (373)
T 2mad_H 48 QQWVLDAGSGSILGHV-----NGGFLPNPVAAHSGSEFALASTSFSRIAKGKRTDYVEVFDPVTFL-PIADIELPDAPRF 121 (373)
T ss_pred EEEEEECCCCeEEEEe-----cCCCCCCeEECCCCCEEEEEeccccccccCCCCCeEEEEECCCCc-EEEEEECCCcccc
Confidence 7899999887643322 22222222222 244888875221 112234678899998753 2333332100 00
Q ss_pred -CCCcccEEEE-eCCcEEEEEcCCCCCCCCCcEEEEECCCC
Q 002047 226 -GPRYGHVMAL-VGQRYLMAIGGNDGKRPLADVWALDTAAK 264 (975)
Q Consensus 226 -~~R~~h~~~~-~~~~~lyV~GG~~g~~~~ndv~~yDl~s~ 264 (975)
....-+.+++ -++++||+..-. ..+.++++| .+.
T Consensus 122 ~~g~~p~~~~~spDG~~l~v~n~~----~~~~v~viD-~t~ 157 (373)
T 2mad_H 122 DVGPYSWMNANTPNNADLLFFQFA----AGPAVGLVV-QGG 157 (373)
T ss_pred ccCCCccceEECCCCCEEEEEecC----CCCeEEEEE-CCC
Confidence 0011122322 245578886321 136799999 887
No 177
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=75.80 E-value=51 Score=35.39 Aligned_cols=63 Identities=8% Similarity=0.036 Sum_probs=34.0
Q ss_pred EEEEEeccCCCCCccccEEEEEcCCCCCc-----EEEEEecCCCCC---CCcccEEEEe----CCcEE-EEEcCCCCCCC
Q 002047 186 MVVIQGGIGPAGLSAEDLHVLDLTQQRPR-----WHRVVVQGPGPG---PRYGHVMALV----GQRYL-MAIGGNDGKRP 252 (975)
Q Consensus 186 ~iyv~GG~~~~~~~~~dv~~yD~~t~~~~-----W~~v~~~g~~P~---~R~~h~~~~~----~~~~l-yV~GG~~g~~~ 252 (975)
.+++.|+. ...+.+||+.+.. . +..+. ..+. ...-.++... .++.+ ++.|+.++
T Consensus 82 ~~l~s~~~------dg~i~iw~~~~~~-~~~~~~~~~~~---~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~~dg--- 148 (397)
T 1sq9_A 82 CLVATTSF------SGDLLFYRITRED-ETKKVIFEKLD---LLDSDMKKHSFWALKWGASNDRLLSHRLVATDVKG--- 148 (397)
T ss_dssp EEEEEEET------TSCEEEEEEEECT-TTCCEEEEEEC---CSCTTGGGSCEEEEEEECCC----CEEEEEEETTS---
T ss_pred cEEEEEcC------CCCEEEEEccCCc-ccccccceeec---ccccccCCCcEEEEEEeeccCCCCceEEEEEeCCC---
Confidence 77777775 3568899987753 2 44443 1111 1222233334 23345 77777654
Q ss_pred CCcEEEEECCC
Q 002047 253 LADVWALDTAA 263 (975)
Q Consensus 253 ~ndv~~yDl~s 263 (975)
.+..||+.+
T Consensus 149 --~i~iwd~~~ 157 (397)
T 1sq9_A 149 --TTYIWKFHP 157 (397)
T ss_dssp --CEEEEEEES
T ss_pred --cEEEEeCCc
Confidence 577777765
No 178
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=75.71 E-value=75 Score=37.95 Aligned_cols=199 Identities=12% Similarity=0.049 Sum_probs=101.3
Q ss_pred CcEEEEECCCCcEEEecCCCCCCCCccceEEEEeCC-EEEEEeccCCC------CCccccEEEEEcCCCCCcEEEEEecC
Q 002047 150 ADVHCYDVLTNKWSRITPFGEPPTPRAAHVATAVGT-MVVIQGGIGPA------GLSAEDLHVLDLTQQRPRWHRVVVQG 222 (975)
Q Consensus 150 ~dv~~yD~~t~~W~~l~~~g~~P~pR~~hsa~~~~~-~iyv~GG~~~~------~~~~~dv~~yD~~t~~~~W~~v~~~g 222 (975)
.+++++|+.+++...... +..+....+.. ++ .||+.--.... ......+|++++.+...+=..+.
T Consensus 155 ~~i~v~dl~tg~~~~~~~----~~~k~~~~~Ws-Dg~~l~y~~~~~~~~~~~~~~~~~~~v~~~~lgt~~~~~~~v~--- 226 (693)
T 3iuj_A 155 REIHLMDVESKQPLETPL----KDVKFSGISWL-GNEGFFYSSYDKPDGSELSARTDQHKVYFHRLGTAQEDDRLVF--- 226 (693)
T ss_dssp EEEEEEETTTCSEEEEEE----EEEESCCCEEE-TTTEEEEEESSCCC-------CCCCEEEEEETTSCGGGCEEEE---
T ss_pred EEEEEEECCCCCCCcccc----CCceeccEEEe-CCCEEEEEEecCcccccccccCCCcEEEEEECCCCcccceEEE---
Confidence 479999999998766522 11222334445 55 55544322110 12345799999876531112332
Q ss_pred CCCC--CCcccEEEEe-CCcEEEEEcCCCCCCCCCcEEEEECCCCCcEEEEccCCCCCCCCcceeEEEEEeCCeEEEecC
Q 002047 223 PGPG--PRYGHVMALV-GQRYLMAIGGNDGKRPLADVWALDTAAKPYEWRKLEPEGEGPPPCMYATASARSDGLLLLCGG 299 (975)
Q Consensus 223 ~~P~--~R~~h~~~~~-~~~~lyV~GG~~g~~~~ndv~~yDl~s~~~~W~~v~~~~~~P~~r~~~~a~~~~~g~lyvfGG 299 (975)
..+. +........- ++++|++...... ..+++|.+|+.+..-.|..+..... .........+++||+...
T Consensus 227 ~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~--~~~~i~~~d~~~~~~~~~~l~~~~~-----~~~~~~~~~g~~l~~~t~ 299 (693)
T 3iuj_A 227 GAIPAQHHRYVGATVTEDDRFLLISAANST--SGNRLYVKDLSQENAPLLTVQGDLD-----ADVSLVDNKGSTLYLLTN 299 (693)
T ss_dssp SCSGGGCCSEEEEEECTTSCEEEEEEESSS--SCCEEEEEETTSTTCCCEEEECSSS-----SCEEEEEEETTEEEEEEC
T ss_pred ecCCCCCeEEEEEEEcCCCCEEEEEEccCC--CCcEEEEEECCCCCCceEEEeCCCC-----ceEEEEeccCCEEEEEEC
Confidence 1121 2222222222 3434444433222 1368999998765335777654322 112224456889998876
Q ss_pred CCCCCCCccceEEeecCCCC--eEEEEECCCCCCCCcceeeEEEeCCEEEEEcCcCCCCCccccCCcEEEEECCCCeEEE
Q 002047 300 RDASSVPLASAYGLAKHRDG--RWEWAIAPGVSPSPRYQHAAVFVNARLHVSGGALGGGRMVEDSSSVAVLDTAAGVWCD 377 (975)
Q Consensus 300 ~~~~~~~l~d~~~~~~~~~~--~W~w~~~~g~~P~~R~~hs~v~~~~~L~V~GG~~~~~~~~~~~~dv~~yD~~t~~W~~ 377 (975)
.+. ....++.++..... .|+-... .... .- +....+++|++..-.++ ...|+++|+.+.....
T Consensus 300 ~~~---~~~~l~~~d~~~~~~~~~~~l~~--~~~~--~~-~~s~~g~~lv~~~~~~g-------~~~l~~~d~~g~~~~~ 364 (693)
T 3iuj_A 300 RDA---PNRRLVTVDAANPGPAHWRDLIP--ERQQ--VL-TVHSGSGYLFAEYMVDA-------TARVEQFDYEGKRVRE 364 (693)
T ss_dssp TTC---TTCEEEEEETTSCCGGGCEEEEC--CCSS--CE-EEEEETTEEEEEEEETT-------EEEEEEECTTSCEEEE
T ss_pred CCC---CCCEEEEEeCCCCCccccEEEec--CCCC--EE-EEEEECCEEEEEEEECC-------eeEEEEEECCCCeeEE
Confidence 543 23456666554432 3553222 1111 12 55555777766543222 3468999998776555
Q ss_pred c
Q 002047 378 T 378 (975)
Q Consensus 378 v 378 (975)
+
T Consensus 365 l 365 (693)
T 3iuj_A 365 V 365 (693)
T ss_dssp E
T ss_pred e
Confidence 4
No 179
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=75.55 E-value=77 Score=32.93 Aligned_cols=92 Identities=11% Similarity=0.074 Sum_probs=46.8
Q ss_pred cEEEEECCCCcEEE-ecCCCCCCCCccceEEEEe-CCEEEEEeccCCCCCccccEEEEEcCCCCCcEEEEEecCCCCCCC
Q 002047 151 DVHCYDVLTNKWSR-ITPFGEPPTPRAAHVATAV-GTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGPR 228 (975)
Q Consensus 151 dv~~yD~~t~~W~~-l~~~g~~P~pR~~hsa~~~-~~~iyv~GG~~~~~~~~~dv~~yD~~t~~~~W~~v~~~g~~P~~R 228 (975)
.+..||+.+.+-.. +... ...-.+++.. ++.+++.|+. ...+.+||+.+. |...... ....
T Consensus 78 ~i~vwd~~~~~~~~~~~~h-----~~~v~~~~~~~~~~~l~sgs~------D~~v~lWd~~~~---~~~~~~~---~~h~ 140 (304)
T 2ynn_A 78 RIRVFNYNTGEKVVDFEAH-----PDYIRSIAVHPTKPYVLSGSD------DLTVKLWNWENN---WALEQTF---EGHE 140 (304)
T ss_dssp EEEEEETTTCCEEEEEECC-----SSCEEEEEECSSSSEEEEEET------TSCEEEEEGGGT---TEEEEEE---CCCC
T ss_pred EEEEEECCCCcEEEEEeCC-----CCcEEEEEEcCCCCEEEEECC------CCeEEEEECCCC---cchhhhh---cccC
Confidence 67788888765322 2111 1111222332 3456666664 356889998775 3332211 1111
Q ss_pred cccEEEEeC--CcEEEEEcCCCCCCCCCcEEEEECCCC
Q 002047 229 YGHVMALVG--QRYLMAIGGNDGKRPLADVWALDTAAK 264 (975)
Q Consensus 229 ~~h~~~~~~--~~~lyV~GG~~g~~~~ndv~~yDl~s~ 264 (975)
..-.++.+. ++.+++.|+.++ .+..||+.+.
T Consensus 141 ~~v~~v~~~p~~~~~l~sgs~D~-----~v~iwd~~~~ 173 (304)
T 2ynn_A 141 HFVMCVAFNPKDPSTFASGCLDR-----TVKVWSLGQS 173 (304)
T ss_dssp SCEEEEEECTTCTTEEEEEETTS-----EEEEEETTCS
T ss_pred CcEEEEEECCCCCCEEEEEeCCC-----eEEEEECCCC
Confidence 111222332 335777787765 6788888655
No 180
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=75.49 E-value=42 Score=36.58 Aligned_cols=93 Identities=18% Similarity=0.157 Sum_probs=47.6
Q ss_pred EEEEEeccCCCCCccccEEEEEcCCCCCcEEEEEecCCCCCCCcccEEEEeCCcEEEEEcCCCCCCCCCcEEEEECCCCC
Q 002047 186 MVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGPRYGHVMALVGQRYLMAIGGNDGKRPLADVWALDTAAKP 265 (975)
Q Consensus 186 ~iyv~GG~~~~~~~~~dv~~yD~~t~~~~W~~v~~~g~~P~~R~~h~~~~~~~~~lyV~GG~~g~~~~ndv~~yDl~s~~ 265 (975)
.+++.|+. ...+.+||+.+.. ....- ........-.+++...++.+++.|+.++ .+.+||+.+.
T Consensus 145 ~~l~s~~~------dg~i~iwd~~~~~--~~~~~--~~~~~~~~v~~~~~~~~~~~l~~~~~d~-----~i~iwd~~~~- 208 (402)
T 2aq5_A 145 NVLLSAGC------DNVILVWDVGTGA--AVLTL--GPDVHPDTIYSVDWSRDGALICTSCRDK-----RVRVIEPRKG- 208 (402)
T ss_dssp TEEEEEET------TSCEEEEETTTTE--EEEEE--CTTTCCSCEEEEEECTTSSCEEEEETTS-----EEEEEETTTT-
T ss_pred CEEEEEcC------CCEEEEEECCCCC--ccEEE--ecCCCCCceEEEEECCCCCEEEEEecCC-----cEEEEeCCCC-
Confidence 46777764 3469999998753 22211 0011111222333333445677776653 6899999887
Q ss_pred cEEEEcc-CCCCCCCCcceeEEEEEeCCeEEEec
Q 002047 266 YEWRKLE-PEGEGPPPCMYATASARSDGLLLLCG 298 (975)
Q Consensus 266 ~~W~~v~-~~~~~P~~r~~~~a~~~~~g~lyvfG 298 (975)
+-...- ..... ......+...++++++.|
T Consensus 209 -~~~~~~~~~~~~---~~~~~~~~~~~~~~l~~g 238 (402)
T 2aq5_A 209 -TVVAEKDRPHEG---TRPVHAVFVSEGKILTTG 238 (402)
T ss_dssp -EEEEEEECSSCS---SSCCEEEECSTTEEEEEE
T ss_pred -ceeeeeccCCCC---CcceEEEEcCCCcEEEEe
Confidence 432221 11111 112333444577877776
No 181
>1t71_A Phosphatase, conserved HYPO; crystal, X-RAY crystallography, structural GENO berkeley structural genomics center, BSGC, PSI; 2.10A {Mycoplasma pneumoniae M129} SCOP: d.159.1.9
Probab=74.79 E-value=1.7 Score=46.55 Aligned_cols=68 Identities=21% Similarity=0.242 Sum_probs=41.5
Q ss_pred cCCEEEEecCCCCHH--HHHHHHHHhCCC-CCCCCccceeEEEeccccCCC-CChHHHHHHHHHhhhcCCCCEEEEeccc
Q 002047 697 KAPIKIFGDLHGQFG--DLMRLFDEYGSP-STAGDIAYIDYLFLGDYVDRG-QHSLETITLLLALKVEYPNNVHLIRGNH 772 (975)
Q Consensus 697 ~~~i~vvGDiHG~~~--~L~~ll~~~g~~-~~~~~~~~~~~vfLGDyVDRG-~~s~evl~ll~~lk~~~P~~v~llrGNH 772 (975)
+++|.++|||||... .+...+..+.-. ..+ -+++.||-.--| ..+..+..+|..+.. .+ +-.|||
T Consensus 4 ~m~ilf~GDv~G~~G~~~l~~~l~~lr~~~~~d------~vi~Ngen~~gG~g~~~~~~~~ln~~G~----Da-~TlGNH 72 (281)
T 1t71_A 4 SIKFIFLGDVYGKAGRNIIKNNLAQLKSKYQAD------LVIVNAENTTHGKGLSLKHYEFLKEAGV----NY-ITMGNH 72 (281)
T ss_dssp CCEEEEECEEBHHHHHHHHHTTHHHHHHHHTCS------EEEEECTBTTTTSSCCHHHHHHHHHHTC----CE-EECCTT
T ss_pred eEEEEEECCcCChHHHHHHHHHHHHHHHhcCCC------EEEEcCCCCCCCCCcCHHHHHHHHhcCC----CE-EEEccC
Confidence 578999999999852 233344333210 011 456666666544 456788888888743 33 445999
Q ss_pred ccc
Q 002047 773 EAA 775 (975)
Q Consensus 773 E~~ 775 (975)
|.-
T Consensus 73 efD 75 (281)
T 1t71_A 73 TWF 75 (281)
T ss_dssp TTC
T ss_pred ccc
Confidence 984
No 182
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=74.53 E-value=78 Score=32.14 Aligned_cols=180 Identities=8% Similarity=-0.048 Sum_probs=89.5
Q ss_pred cEEEEECCCCcEEEecCCCCCCCCccceEEEEe-CCEEEEEeccCCCCCccccEEEEEcCCCCCcEEEEEecCCCCCCCc
Q 002047 151 DVHCYDVLTNKWSRITPFGEPPTPRAAHVATAV-GTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGPRY 229 (975)
Q Consensus 151 dv~~yD~~t~~W~~l~~~g~~P~pR~~hsa~~~-~~~iyv~GG~~~~~~~~~dv~~yD~~t~~~~W~~v~~~g~~P~~R~ 229 (975)
.+++||+. ..+..+... .....-++++.. ++.+|+.... ...+++||+ +. +........ ....
T Consensus 79 ~i~~~~~~-g~~~~~~~~---~~~~~~~~i~~~~~g~l~v~~~~------~~~i~~~d~-~g--~~~~~~~~~---~~~~ 142 (299)
T 2z2n_A 79 KIGRITKK-GIIKEYTLP---NPDSAPYGITEGPNGDIWFTEMN------GNRIGRITD-DG--KIREYELPN---KGSY 142 (299)
T ss_dssp EEEEECTT-SCEEEEECS---STTCCEEEEEECTTSCEEEEETT------TTEEEEECT-TC--CEEEEECSS---TTCC
T ss_pred eEEEECCC-CcEEEEeCC---CcCCCceeeEECCCCCEEEEecC------CceEEEECC-CC--CEEEecCCC---CCCC
Confidence 57888876 455554321 011223444444 3578876532 246889998 43 254443111 1222
Q ss_pred ccEEEEeCCcEEEEEcCCCCCCCCCcEEEEECCCCCcEEEEccCCCCCCCCcceeEEEEEeCCeEEEecCCCCCCCCccc
Q 002047 230 GHVMALVGQRYLMAIGGNDGKRPLADVWALDTAAKPYEWRKLEPEGEGPPPCMYATASARSDGLLLLCGGRDASSVPLAS 309 (975)
Q Consensus 230 ~h~~~~~~~~~lyV~GG~~g~~~~ndv~~yDl~s~~~~W~~v~~~~~~P~~r~~~~a~~~~~g~lyvfGG~~~~~~~l~d 309 (975)
-+.++...++.+|+.... .+.+++||+ +. +...+...... ..-...+...++.+|+.... .+.
T Consensus 143 ~~~i~~~~~g~l~v~~~~-----~~~i~~~~~-~g--~~~~~~~~~~~---~~~~~i~~~~~g~l~v~~~~------~~~ 205 (299)
T 2z2n_A 143 PSFITLGSDNALWFTENQ-----NNAIGRITE-SG--DITEFKIPTPA---SGPVGITKGNDDALWFVEII------GNK 205 (299)
T ss_dssp EEEEEECTTSCEEEEETT-----TTEEEEECT-TC--CEEEEECSSTT---CCEEEEEECTTSSEEEEETT------TTE
T ss_pred CceEEEcCCCCEEEEeCC-----CCEEEEEcC-CC--cEEEeeCCCCC---CcceeEEECCCCCEEEEccC------Cce
Confidence 344444445578886421 246999999 66 45443211110 11122223345788886432 234
Q ss_pred eEEeecCCCCeEEEEECCCCCCCCcceeeEEEe-CCEEEEEcCcCCCCCccccCCcEEEEECCCCeEEEc
Q 002047 310 AYGLAKHRDGRWEWAIAPGVSPSPRYQHAAVFV-NARLHVSGGALGGGRMVEDSSSVAVLDTAAGVWCDT 378 (975)
Q Consensus 310 ~~~~~~~~~~~W~w~~~~g~~P~~R~~hs~v~~-~~~L~V~GG~~~~~~~~~~~~dv~~yD~~t~~W~~v 378 (975)
++.++. ++.+.....+.. ...-.++++. ++.|||.... .+.|++||+ +.+...+
T Consensus 206 i~~~~~--~g~~~~~~~~~~---~~~~~~i~~~~~g~l~v~~~~---------~~~i~~~d~-~g~~~~~ 260 (299)
T 2z2n_A 206 IGRITT--SGEITEFKIPTP---NARPHAITAGAGIDLWFTEWG---------ANKIGRLTS-NNIIEEY 260 (299)
T ss_dssp EEEECT--TCCEEEEECSST---TCCEEEEEECSTTCEEEEETT---------TTEEEEEET-TTEEEEE
T ss_pred EEEECC--CCcEEEEECCCC---CCCceeEEECCCCCEEEeccC---------CceEEEECC-CCceEEE
Confidence 666766 344443322211 1112233333 4678876421 245899998 4554443
No 183
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=74.34 E-value=79 Score=32.10 Aligned_cols=181 Identities=9% Similarity=-0.020 Sum_probs=93.3
Q ss_pred CcEEEEECCCCcEEEecCCCCCCCCccceEEEEe-CCEEEEEeccCCCCCccccEEEEEcCCCCCcEEEEEecCCCCCCC
Q 002047 150 ADVHCYDVLTNKWSRITPFGEPPTPRAAHVATAV-GTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGPR 228 (975)
Q Consensus 150 ~dv~~yD~~t~~W~~l~~~g~~P~pR~~hsa~~~-~~~iyv~GG~~~~~~~~~dv~~yD~~t~~~~W~~v~~~g~~P~~R 228 (975)
+.+++||+. ..+....... ....-++++.. ++.+|+.... ...+++||+.. ++..+... ....
T Consensus 36 ~~v~~~d~~-~~~~~~~~~~---~~~~~~~i~~~~~g~l~v~~~~------~~~i~~~~~~g---~~~~~~~~---~~~~ 99 (299)
T 2z2n_A 36 NMISCINLD-GKITEYPLPT---PDAKVMCLTISSDGEVWFTENA------ANKIGRITKKG---IIKEYTLP---NPDS 99 (299)
T ss_dssp TEEEEECTT-CCEEEEECSS---TTCCEEEEEECTTSCEEEEETT------TTEEEEECTTS---CEEEEECS---STTC
T ss_pred CcEEEEcCC-CCeEEecCCc---ccCceeeEEECCCCCEEEeCCC------CCeEEEECCCC---cEEEEeCC---CcCC
Confidence 367889988 7777654221 11223344443 4577776432 23588998763 35554311 0122
Q ss_pred cccEEEEeCCcEEEEEcCCCCCCCCCcEEEEECCCCCcEEEEccCCCCCCCCcceeEEEEEeCCeEEEecCCCCCCCCcc
Q 002047 229 YGHVMALVGQRYLMAIGGNDGKRPLADVWALDTAAKPYEWRKLEPEGEGPPPCMYATASARSDGLLLLCGGRDASSVPLA 308 (975)
Q Consensus 229 ~~h~~~~~~~~~lyV~GG~~g~~~~ndv~~yDl~s~~~~W~~v~~~~~~P~~r~~~~a~~~~~g~lyvfGG~~~~~~~l~ 308 (975)
.-+.++...++.||+.... ...+++||+ +. +.......... ......+...++++|+.... ..
T Consensus 100 ~~~~i~~~~~g~l~v~~~~-----~~~i~~~d~-~g--~~~~~~~~~~~---~~~~~i~~~~~g~l~v~~~~------~~ 162 (299)
T 2z2n_A 100 APYGITEGPNGDIWFTEMN-----GNRIGRITD-DG--KIREYELPNKG---SYPSFITLGSDNALWFTENQ------NN 162 (299)
T ss_dssp CEEEEEECTTSCEEEEETT-----TTEEEEECT-TC--CEEEEECSSTT---CCEEEEEECTTSCEEEEETT------TT
T ss_pred CceeeEECCCCCEEEEecC-----CceEEEECC-CC--CEEEecCCCCC---CCCceEEEcCCCCEEEEeCC------CC
Confidence 3344544445578886532 246899999 55 34433211110 12222333346788886421 23
Q ss_pred ceEEeecCCCCeEEEEECCCCCCCCcceeeEEEe-CCEEEEEcCcCCCCCccccCCcEEEEECCCCeEEEc
Q 002047 309 SAYGLAKHRDGRWEWAIAPGVSPSPRYQHAAVFV-NARLHVSGGALGGGRMVEDSSSVAVLDTAAGVWCDT 378 (975)
Q Consensus 309 d~~~~~~~~~~~W~w~~~~g~~P~~R~~hs~v~~-~~~L~V~GG~~~~~~~~~~~~dv~~yD~~t~~W~~v 378 (975)
.++.++. ++.+.....+.. ...-.++++. ++.|||.... .+.|++||+ +.++..+
T Consensus 163 ~i~~~~~--~g~~~~~~~~~~---~~~~~~i~~~~~g~l~v~~~~---------~~~i~~~~~-~g~~~~~ 218 (299)
T 2z2n_A 163 AIGRITE--SGDITEFKIPTP---ASGPVGITKGNDDALWFVEII---------GNKIGRITT-SGEITEF 218 (299)
T ss_dssp EEEEECT--TCCEEEEECSST---TCCEEEEEECTTSSEEEEETT---------TTEEEEECT-TCCEEEE
T ss_pred EEEEEcC--CCcEEEeeCCCC---CCcceeEEECCCCCEEEEccC---------CceEEEECC-CCcEEEE
Confidence 4677766 445544333211 1112233333 4678876431 345899999 7776654
No 184
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=74.21 E-value=86 Score=32.91 Aligned_cols=191 Identities=13% Similarity=0.088 Sum_probs=89.6
Q ss_pred ccCcEEEEECCCCcEEEecCCCCCCCCccceEEEEeCC-EEEEEeccCCCCCccccEEEEEcCCCCCcEEEEEecCCCCC
Q 002047 148 ATADVHCYDVLTNKWSRITPFGEPPTPRAAHVATAVGT-MVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPG 226 (975)
Q Consensus 148 ~~~dv~~yD~~t~~W~~l~~~g~~P~pR~~hsa~~~~~-~iyv~GG~~~~~~~~~dv~~yD~~t~~~~W~~v~~~g~~P~ 226 (975)
....+|.+|+.+..-..+. ........-++ .|++...... .....+|++|+.+. +...+... +.
T Consensus 41 ~~~~l~~~d~~~~~~~~l~--------~~~~~~~SpDg~~la~~~~~~~--~~~~~l~~~~~~~g--~~~~l~~~---~~ 105 (347)
T 2gop_A 41 YENTIVIENLKNNARRFIE--------NATMPRISPDGKKIAFMRANEE--KKVSEIWVADLETL--SSKKILEA---KN 105 (347)
T ss_dssp EEEEEEEEETTTCCEEEEE--------SCEEEEECTTSSEEEEEEEETT--TTEEEEEEEETTTT--EEEEEEEE---SE
T ss_pred ccceEEEEeCCCCceEEcc--------cCCCeEECCCCCEEEEEEeccC--CCcceEEEEECCCC--ceEEEEcC---CC
Confidence 4568999999988766661 11111112133 4544432211 12356999998875 35555422 11
Q ss_pred CCcccEEEEe-CCcEEEEEcCC-----------------CCC----CCCCcEEEEECCCCCcEE-EEccCCCCCCCCcce
Q 002047 227 PRYGHVMALV-GQRYLMAIGGN-----------------DGK----RPLADVWALDTAAKPYEW-RKLEPEGEGPPPCMY 283 (975)
Q Consensus 227 ~R~~h~~~~~-~~~~lyV~GG~-----------------~g~----~~~ndv~~yDl~s~~~~W-~~v~~~~~~P~~r~~ 283 (975)
-...... +++.|++.... ++. .....++++|+.+. +. ..+.. . ..
T Consensus 106 ---~~~~~wspdg~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~--~~~~~l~~-~------~~ 173 (347)
T 2gop_A 106 ---IRSLEWNEDSRKLLIVGFKRREDEDFIFEDDVPAWFDDLGFFDGEKTTFWIFDTESE--EVIEEFEK-P------RF 173 (347)
T ss_dssp ---EEEEEECTTSSEEEEEEECCCC---------CCCC---------CEEEEEEEETTTT--EEEEEEEE-E------TT
T ss_pred ---ccceeECCCCCEEEEEEccCCCcCCcEEEcccceeecCcccccCccceEEEEECCCC--eEEeeecC-C------Cc
Confidence 1222222 34345444311 111 11357999999888 66 55543 1 11
Q ss_pred eEEEEEeCCeEEEecCCCCCCC--C-ccceEEeecCCCCeEEEEECCCCCCCCcceeeEEEeCCEEEEEcCcCCCCCccc
Q 002047 284 ATASARSDGLLLLCGGRDASSV--P-LASAYGLAKHRDGRWEWAIAPGVSPSPRYQHAAVFVNARLHVSGGALGGGRMVE 360 (975)
Q Consensus 284 ~~a~~~~~g~lyvfGG~~~~~~--~-l~d~~~~~~~~~~~W~w~~~~g~~P~~R~~hs~v~~~~~L~V~GG~~~~~~~~~ 360 (975)
.......++ +++.+..+.... . ...+|.++ .+.+...... .......-+++.+++++...... ..
T Consensus 174 ~~~~~spdg-~~~~~~~~~~~~~~~~~~~l~~~d---~~~~~~l~~~-------~~~~~~spdg~~l~~~~~~~~~~-~~ 241 (347)
T 2gop_A 174 SSGIWHRDK-IVVNVPHREIIPQYFKFWDIYIWE---DGKEEKMFEK-------VSFYAVDSDGERILLYGKPEKKY-MS 241 (347)
T ss_dssp CEEEEETTE-EEEEEECCCSSCCSSCCEEEEEEE---TTEEEEEEEE-------ESEEEEEECSSCEEEEECCSSSC-CC
T ss_pred ccccCCCCe-EEEEEecccccccccccccEEEeC---CCceEEeccC-------cceeeECCCCCEEEEEEccccCC-cc
Confidence 223334456 555554432211 1 45677776 3444332211 11122233555444444322110 01
Q ss_pred cCCcEEEEECCCCeEEEcc
Q 002047 361 DSSSVAVLDTAAGVWCDTK 379 (975)
Q Consensus 361 ~~~dv~~yD~~t~~W~~v~ 379 (975)
....||++| +.++..+.
T Consensus 242 ~~~~l~~~d--~~~~~~l~ 258 (347)
T 2gop_A 242 EHNKLYIYD--GKEVMGIL 258 (347)
T ss_dssp SSCEEEEEC--SSCEEESS
T ss_pred ccceEEEEC--CCceEecc
Confidence 245799999 66666553
No 185
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=74.15 E-value=97 Score=33.07 Aligned_cols=128 Identities=13% Similarity=0.028 Sum_probs=65.5
Q ss_pred cEEEEECCCCcEEEecCCCCCCCCccceEEEEeC--CEEEEEeccCCCCCccccEEEEEcCCCCCcEEEEEecCCCCCCC
Q 002047 151 DVHCYDVLTNKWSRITPFGEPPTPRAAHVATAVG--TMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGPR 228 (975)
Q Consensus 151 dv~~yD~~t~~W~~l~~~g~~P~pR~~hsa~~~~--~~iyv~GG~~~~~~~~~dv~~yD~~t~~~~W~~v~~~g~~P~~R 228 (975)
.+.+||+.+.......... .....-.+++... +.+++.|+. ...+.+||+.+. ....+... .....
T Consensus 97 ~i~iwd~~~~~~~~~~~~~--~h~~~v~~~~~~~~~~~~l~s~~~------d~~i~iwd~~~~--~~~~~~~~--~~~~~ 164 (383)
T 3ei3_B 97 DIILWDYDVQNKTSFIQGM--GPGDAITGMKFNQFNTNQLFVSSI------RGATTLRDFSGS--VIQVFAKT--DSWDY 164 (383)
T ss_dssp CEEEEETTSTTCEEEECCC--STTCBEEEEEEETTEEEEEEEEET------TTEEEEEETTSC--EEEEEECC--CCSSC
T ss_pred eEEEEeCCCcccceeeecC--CcCCceeEEEeCCCCCCEEEEEeC------CCEEEEEECCCC--ceEEEecc--CCCCC
Confidence 6788999887766554320 1112222333333 367777764 357889999864 34444311 11111
Q ss_pred cccEEEEeCCcEEEEEcCCCCCCCCCcEEEEECCCCCcEEEEccCCCCCCCCcceeEEEEEeCCe-EEEecCCCC
Q 002047 229 YGHVMALVGQRYLMAIGGNDGKRPLADVWALDTAAKPYEWRKLEPEGEGPPPCMYATASARSDGL-LLLCGGRDA 302 (975)
Q Consensus 229 ~~h~~~~~~~~~lyV~GG~~g~~~~ndv~~yDl~s~~~~W~~v~~~~~~P~~r~~~~a~~~~~g~-lyvfGG~~~ 302 (975)
.-.+++...++.+++.|+.++ .+..||+... .-..+..... .........++. +++.|+.++
T Consensus 165 ~v~~~~~~~~~~~l~~~~~d~-----~i~i~d~~~~--~~~~~~~h~~-----~v~~~~~~~~~~~~l~s~~~d~ 227 (383)
T 3ei3_B 165 WYCCVDVSVSRQMLATGDSTG-----RLLLLGLDGH--EIFKEKLHKA-----KVTHAEFNPRCDWLMATSSVDA 227 (383)
T ss_dssp CEEEEEEETTTTEEEEEETTS-----EEEEEETTSC--EEEEEECSSS-----CEEEEEECSSCTTEEEEEETTS
T ss_pred CeEEEEECCCCCEEEEECCCC-----CEEEEECCCC--EEEEeccCCC-----cEEEEEECCCCCCEEEEEeCCC
Confidence 122333334445777777654 7888998654 3333332111 122222333454 777777553
No 186
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=73.41 E-value=43 Score=36.17 Aligned_cols=67 Identities=10% Similarity=0.039 Sum_probs=35.0
Q ss_pred CEEEEEeccCCCCCccccEEEEEcCCCCCcEEEEEecCCCCC-----CCcccEEEEeCC-cEEEEEcCCCCCCCCCcEEE
Q 002047 185 TMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPG-----PRYGHVMALVGQ-RYLMAIGGNDGKRPLADVWA 258 (975)
Q Consensus 185 ~~iyv~GG~~~~~~~~~dv~~yD~~t~~~~W~~v~~~g~~P~-----~R~~h~~~~~~~-~~lyV~GG~~g~~~~ndv~~ 258 (975)
+.+++.|+. ...+.+||+.+.. ..... ..+. ...-.+++...+ ..+++.|+.++.. ..+..
T Consensus 178 ~~~l~~~~~------dg~v~iwd~~~~~--~~~~~---~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~~--~~i~~ 244 (416)
T 2pm9_A 178 AHVFASAGS------SNFASIWDLKAKK--EVIHL---SYTSPNSGIKQQLSVVEWHPKNSTRVATATGSDND--PSILI 244 (416)
T ss_dssp TTEEEEESS------SSCEEEEETTTTE--EEEEE---CCCCCSSCCCCCEEEEEECSSCTTEEEEEECCSSS--CCCCE
T ss_pred CcEEEEEcC------CCCEEEEECCCCC--cceEE---eccccccccCCceEEEEECCCCCCEEEEEECCCCC--ceEEE
Confidence 467777764 3569999998753 22211 1111 111222323322 2477777665421 25778
Q ss_pred EECCCC
Q 002047 259 LDTAAK 264 (975)
Q Consensus 259 yDl~s~ 264 (975)
||+.+.
T Consensus 245 ~d~~~~ 250 (416)
T 2pm9_A 245 WDLRNA 250 (416)
T ss_dssp EETTST
T ss_pred EeCCCC
Confidence 888764
No 187
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=72.62 E-value=1.1e+02 Score=33.44 Aligned_cols=64 Identities=13% Similarity=0.111 Sum_probs=34.8
Q ss_pred CCEEEEEeccCCCCCccccEEEEEcCCCCCcEEEEEecCCCCCCCcccEEEEeCCcEEEEEcCCCCCCCCCcEEEEECCC
Q 002047 184 GTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGPRYGHVMALVGQRYLMAIGGNDGKRPLADVWALDTAA 263 (975)
Q Consensus 184 ~~~iyv~GG~~~~~~~~~dv~~yD~~t~~~~W~~v~~~g~~P~~R~~h~~~~~~~~~lyV~GG~~g~~~~ndv~~yDl~s 263 (975)
++..++.|+. ...+.+||+.+.. .-..+. +. ...-..+....++.+++.|+.++ .+..||+.+
T Consensus 203 ~~~~l~s~s~------D~~i~~wd~~~~~-~~~~~~--~h---~~~v~~~~~~~~g~~l~s~s~D~-----~v~vwd~~~ 265 (410)
T 1vyh_C 203 NGDHIVSASR------DKTIKMWEVQTGY-CVKTFT--GH---REWVRMVRPNQDGTLIASCSNDQ-----TVRVWVVAT 265 (410)
T ss_dssp SSSEEEEEET------TSEEEEEETTTCC-EEEEEE--CC---SSCEEEEEECTTSSEEEEEETTS-----CEEEEETTT
T ss_pred CCCEEEEEeC------CCeEEEEECCCCc-EEEEEe--CC---CccEEEEEECCCCCEEEEEcCCC-----eEEEEECCC
Confidence 3455666664 3578999998763 122221 11 11111222233446777777664 577888876
Q ss_pred C
Q 002047 264 K 264 (975)
Q Consensus 264 ~ 264 (975)
.
T Consensus 266 ~ 266 (410)
T 1vyh_C 266 K 266 (410)
T ss_dssp C
T ss_pred C
Confidence 6
No 188
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=72.43 E-value=1.2e+02 Score=35.59 Aligned_cols=93 Identities=14% Similarity=0.168 Sum_probs=52.1
Q ss_pred cCcEEEEECCCCcEEEecCCCCCCCCccceEEEEe--CCEEEEEeccCCCCCccccEEEEEcC--CCCCcEEEEEecCCC
Q 002047 149 TADVHCYDVLTNKWSRITPFGEPPTPRAAHVATAV--GTMVVIQGGIGPAGLSAEDLHVLDLT--QQRPRWHRVVVQGPG 224 (975)
Q Consensus 149 ~~dv~~yD~~t~~W~~l~~~g~~P~pR~~hsa~~~--~~~iyv~GG~~~~~~~~~dv~~yD~~--t~~~~W~~v~~~g~~ 224 (975)
.+.+..+|..+++-...-..+ ..-|.++.. +..+|+.+. .+.+.+||+. +.. .-.++. .|.
T Consensus 176 ~~~V~viD~~t~~v~~~i~~g-----~~p~~v~~SpDGr~lyv~~~-------dg~V~viD~~~~t~~-~v~~i~-~G~- 240 (567)
T 1qks_A 176 AGQIALIDGSTYEIKTVLDTG-----YAVHISRLSASGRYLFVIGR-------DGKVNMIDLWMKEPT-TVAEIK-IGS- 240 (567)
T ss_dssp TTEEEEEETTTCCEEEEEECS-----SCEEEEEECTTSCEEEEEET-------TSEEEEEETTSSSCC-EEEEEE-CCS-
T ss_pred CCeEEEEECCCCeEEEEEeCC-----CCccceEECCCCCEEEEEcC-------CCeEEEEECCCCCCc-EeEEEe-cCC-
Confidence 458999999988654332222 233444443 347777642 3479999996 432 122333 122
Q ss_pred CCCCcccEEEEe-----CCcEEEEEcCCCCCCCCCcEEEEECCCCC
Q 002047 225 PGPRYGHVMALV-----GQRYLMAIGGNDGKRPLADVWALDTAAKP 265 (975)
Q Consensus 225 P~~R~~h~~~~~-----~~~~lyV~GG~~g~~~~ndv~~yDl~s~~ 265 (975)
.-..+++. +++++||..-. -+.+.+||..+..
T Consensus 241 ----~P~~ia~s~~~~pDGk~l~v~n~~-----~~~v~ViD~~t~~ 277 (567)
T 1qks_A 241 ----EARSIETSKMEGWEDKYAIAGAYW-----PPQYVIMDGETLE 277 (567)
T ss_dssp ----EEEEEEECCSTTCTTTEEEEEEEE-----TTEEEEEETTTCC
T ss_pred ----CCceeEEccccCCCCCEEEEEEcc-----CCeEEEEECCCCc
Confidence 11233333 45578876432 3578899987763
No 189
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=72.31 E-value=1.1e+02 Score=32.77 Aligned_cols=179 Identities=15% Similarity=0.152 Sum_probs=79.1
Q ss_pred cEEEEECCCCcEEEecCCCCCCCCccceEEEEe-CCEEEEEeccCCCCCccccEEEEEcCCCCC-----cEEEEEecCCC
Q 002047 151 DVHCYDVLTNKWSRITPFGEPPTPRAAHVATAV-GTMVVIQGGIGPAGLSAEDLHVLDLTQQRP-----RWHRVVVQGPG 224 (975)
Q Consensus 151 dv~~yD~~t~~W~~l~~~g~~P~pR~~hsa~~~-~~~iyv~GG~~~~~~~~~dv~~yD~~t~~~-----~W~~v~~~g~~ 224 (975)
.+..+|..+......... +... -.+++.. ++..++.||. ...+.+|++..... .-..+. +
T Consensus 87 ~v~vWd~~~~~~~~~~~~---~~~~-v~~~~~sp~g~~lasg~~------d~~i~v~~~~~~~~~~~~~~~~~~~--~-- 152 (354)
T 2pbi_B 87 KVIVWDSFTTNKEHAVTM---PCTW-VMACAYAPSGCAIACGGL------DNKCSVYPLTFDKNENMAAKKKSVA--M-- 152 (354)
T ss_dssp EEEEEETTTCCEEEEEEC---SSSC-CCEEEECTTSSEEEEEST------TSEEEEEECCCCTTCCSGGGCEEEE--E--
T ss_pred eEEEEECCCCCcceEEec---CCCC-EEEEEECCCCCEEEEeeC------CCCEEEEEEeccccccccccceeee--c--
Confidence 567788776654433222 1111 1222222 4467777775 35677887754310 001111 0
Q ss_pred CCCCcccEEEEeCCcEEEEEcCCCCCCCCCcEEEEECCCCCcEEEEc-cCCCCCCCCcceeEEEEEe-CCeEEEecCCCC
Q 002047 225 PGPRYGHVMALVGQRYLMAIGGNDGKRPLADVWALDTAAKPYEWRKL-EPEGEGPPPCMYATASARS-DGLLLLCGGRDA 302 (975)
Q Consensus 225 P~~R~~h~~~~~~~~~lyV~GG~~g~~~~ndv~~yDl~s~~~~W~~v-~~~~~~P~~r~~~~a~~~~-~g~lyvfGG~~~ 302 (975)
....-.++....++..++.|+.++ .+..||+.+. +-... ..... .....+.... ++.+++.|+.++
T Consensus 153 -h~~~v~~~~~~~~~~~l~t~s~D~-----~v~lwd~~~~--~~~~~~~~h~~----~v~~~~~~~~~~g~~l~sgs~Dg 220 (354)
T 2pbi_B 153 -HTNYLSACSFTNSDMQILTASGDG-----TCALWDVESG--QLLQSFHGHGA----DVLCLDLAPSETGNTFVSGGCDK 220 (354)
T ss_dssp -CSSCEEEEEECSSSSEEEEEETTS-----EEEEEETTTC--CEEEEEECCSS----CEEEEEECCCSSCCEEEEEETTS
T ss_pred -cCCcEEEEEEeCCCCEEEEEeCCC-----cEEEEeCCCC--eEEEEEcCCCC----CeEEEEEEeCCCCCEEEEEeCCC
Confidence 011111222223334555665553 6888898877 33221 11111 1111111111 456777777654
Q ss_pred CCCCccceEEeecCCCCeEEEEECCCCCCCCcceeeEEEe-CCEEEEEcCcCCCCCccccCCcEEEEECCCCeE
Q 002047 303 SSVPLASAYGLAKHRDGRWEWAIAPGVSPSPRYQHAAVFV-NARLHVSGGALGGGRMVEDSSSVAVLDTAAGVW 375 (975)
Q Consensus 303 ~~~~l~d~~~~~~~~~~~W~w~~~~g~~P~~R~~hs~v~~-~~~L~V~GG~~~~~~~~~~~~dv~~yD~~t~~W 375 (975)
. +..++.... ...... .+ ....-.++++. ++.+++.|+.++ .+.+||+.+..-
T Consensus 221 ~------v~~wd~~~~-~~~~~~-~~---h~~~v~~v~~~p~~~~l~s~s~D~---------~v~lwd~~~~~~ 274 (354)
T 2pbi_B 221 K------AMVWDMRSG-QCVQAF-ET---HESDVNSVRYYPSGDAFASGSDDA---------TCRLYDLRADRE 274 (354)
T ss_dssp C------EEEEETTTC-CEEEEE-CC---CSSCEEEEEECTTSSEEEEEETTS---------CEEEEETTTTEE
T ss_pred e------EEEEECCCC-cEEEEe-cC---CCCCeEEEEEeCCCCEEEEEeCCC---------eEEEEECCCCcE
Confidence 3 233333222 211111 11 11111223332 466778887543 378899988753
No 190
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=71.99 E-value=1e+02 Score=32.38 Aligned_cols=97 Identities=12% Similarity=0.089 Sum_probs=50.3
Q ss_pred cEEEEECCCCcEEEecCCCCCCCCccceEEEEe-CCEEEEEeccCCCCCccccEEEEEcCCCCCcEEEEEecCCCCCCCc
Q 002047 151 DVHCYDVLTNKWSRITPFGEPPTPRAAHVATAV-GTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGPRY 229 (975)
Q Consensus 151 dv~~yD~~t~~W~~l~~~g~~P~pR~~hsa~~~-~~~iyv~GG~~~~~~~~~dv~~yD~~t~~~~W~~v~~~g~~P~~R~ 229 (975)
.+..||+.+..+....... .....-.+++.. ++.+++.|+. ...+.+||+.... .|...... ..+....
T Consensus 75 ~i~vwd~~~~~~~~~~~~~--~~~~~v~~~~~~~~~~~l~~~~~------d~~v~i~d~~~~~-~~~~~~~~-~~~~~~~ 144 (372)
T 1k8k_C 75 NAYVWTLKGRTWKPTLVIL--RINRAARCVRWAPNEKKFAVGSG------SRVISICYFEQEN-DWWVCKHI-KKPIRST 144 (372)
T ss_dssp CEEEEEEETTEEEEEEECC--CCSSCEEEEEECTTSSEEEEEET------TSSEEEEEEETTT-TEEEEEEE-CTTCCSC
T ss_pred eEEEEECCCCeeeeeEEee--cCCCceeEEEECCCCCEEEEEeC------CCEEEEEEecCCC-cceeeeee-ecccCCC
Confidence 6788898888876554321 111112222222 3456666664 2468888887754 34433321 1111222
Q ss_pred ccEEEEeCCcEEEEEcCCCCCCCCCcEEEEECC
Q 002047 230 GHVMALVGQRYLMAIGGNDGKRPLADVWALDTA 262 (975)
Q Consensus 230 ~h~~~~~~~~~lyV~GG~~g~~~~ndv~~yDl~ 262 (975)
-.+++...++.+++.|+.++ .+..||+.
T Consensus 145 i~~~~~~~~~~~l~~~~~dg-----~i~~~d~~ 172 (372)
T 1k8k_C 145 VLSLDWHPNSVLLAAGSCDF-----KCRIFSAY 172 (372)
T ss_dssp EEEEEECTTSSEEEEEETTS-----CEEEEECC
T ss_pred eeEEEEcCCCCEEEEEcCCC-----CEEEEEcc
Confidence 22333333446777777654 57888854
No 191
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=71.97 E-value=1.3e+02 Score=34.81 Aligned_cols=194 Identities=11% Similarity=0.106 Sum_probs=90.1
Q ss_pred CcEEEEEC--CCCcEEEecCCCCCCCCccceEEEEe-----CC-EEEEEeccCCCCCccccEEEEEcCCCCCcEEEEEec
Q 002047 150 ADVHCYDV--LTNKWSRITPFGEPPTPRAAHVATAV-----GT-MVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQ 221 (975)
Q Consensus 150 ~dv~~yD~--~t~~W~~l~~~g~~P~pR~~hsa~~~-----~~-~iyv~GG~~~~~~~~~dv~~yD~~t~~~~W~~v~~~ 221 (975)
+.+..||+ .+.+-..--..+ ..-+.++.. ++ .+|+..-. .+.+.++|..+.. .-..+...
T Consensus 200 ~~V~v~D~~~~t~~~~~~i~~g-----~~p~~va~sp~~~~dg~~l~v~~~~------~~~v~v~D~~t~~-~~~~i~~~ 267 (543)
T 1nir_A 200 ARIDMIDLWAKEPTKVAEIKIG-----IEARSVESSKFKGYEDRYTIAGAYW------PPQFAIMDGETLE-PKQIVSTR 267 (543)
T ss_dssp SEEEEEETTSSSCEEEEEEECC-----SEEEEEEECCSTTCTTTEEEEEEEE------SSEEEEEETTTCC-EEEEEECC
T ss_pred CeEEEEECcCCCCcEEEEEecC-----CCcceEEeCCCcCCCCCEEEEEEcc------CCeEEEEeccccc-cceeeccc
Confidence 57889999 665432221122 122233333 34 55555422 3568899988764 22333321
Q ss_pred CC-------CCCCCcccEEEEeCCcEEEEEcCCCCCCCCCcEEEEECCCCCc-EEEEccCCCCCCCCcceeEEEEEeCCe
Q 002047 222 GP-------GPGPRYGHVMALVGQRYLMAIGGNDGKRPLADVWALDTAAKPY-EWRKLEPEGEGPPPCMYATASARSDGL 293 (975)
Q Consensus 222 g~-------~P~~R~~h~~~~~~~~~lyV~GG~~g~~~~ndv~~yDl~s~~~-~W~~v~~~~~~P~~r~~~~a~~~~~g~ 293 (975)
+. .|.+|..+......++.+|+.... .+.++.+|..+... +-..+. .+ +.-+......+++
T Consensus 268 g~~~~~~~~~~~~~v~~i~~s~~~~~~~vs~~~-----~g~i~vvd~~~~~~l~~~~i~-~~-----~~~~~~~~spdg~ 336 (543)
T 1nir_A 268 GMTVDTQTYHPEPRVAAIIASHEHPEFIVNVKE-----TGKVLLVNYKDIDNLTVTSIG-AA-----PFLHDGGWDSSHR 336 (543)
T ss_dssp EECSSSCCEESCCCEEEEEECSSSSEEEEEETT-----TTEEEEEECTTSSSCEEEEEE-CC-----SSCCCEEECTTSC
T ss_pred CcccCccccccCCceEEEEECCCCCEEEEEECC-----CCeEEEEEecCCCcceeEEec-cC-----cCccCceECCCCC
Confidence 11 122333333333334466665432 35799999876421 111222 11 1223333344555
Q ss_pred -EEEecCCCCCCCCccceEEeecCCCCeEEEEECCCCCCCCcceeeEEEe-CCEEEEEcCcCCCCCccccCCcEEEEECC
Q 002047 294 -LLLCGGRDASSVPLASAYGLAKHRDGRWEWAIAPGVSPSPRYQHAAVFV-NARLHVSGGALGGGRMVEDSSSVAVLDTA 371 (975)
Q Consensus 294 -lyvfGG~~~~~~~l~d~~~~~~~~~~~W~w~~~~g~~P~~R~~hs~v~~-~~~L~V~GG~~~~~~~~~~~~dv~~yD~~ 371 (975)
+|+.+..+ +.+..++.. +++.......+..|.+-.+...+.- ++.+|+.+... .+.|-++|+.
T Consensus 337 ~l~va~~~~------~~v~v~D~~-tg~l~~~i~~g~~ph~g~g~~~~~p~~g~~~~s~~~~--------d~~V~v~d~~ 401 (543)
T 1nir_A 337 YFMTAANNS------NKVAVIDSK-DRRLSALVDVGKTPHPGRGANFVHPKYGPVWSTSHLG--------DGSISLIGTD 401 (543)
T ss_dssp EEEEEEGGG------TEEEEEETT-TTEEEEEEECSSSBCCTTCEEEEETTTEEEEEEEBSS--------SSEEEEEECC
T ss_pred EEEEEecCC------CeEEEEECC-CCeEEEeeccCCCCCCCCCcccCCCCCccEEEeccCC--------CceEEEEEeC
Confidence 44443211 233444444 3343333222333444333332211 36788876421 2347788887
Q ss_pred CC-----eEEEcccC
Q 002047 372 AG-----VWCDTKSV 381 (975)
Q Consensus 372 t~-----~W~~v~~~ 381 (975)
+. .|..+..+
T Consensus 402 ~~~~~~~~~~~v~~l 416 (543)
T 1nir_A 402 PKNHPQYAWKKVAEL 416 (543)
T ss_dssp TTTCTTTBTSEEEEE
T ss_pred CCCCchhcCeEEEEE
Confidence 72 37766665
No 192
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=71.94 E-value=1.6e+02 Score=37.45 Aligned_cols=124 Identities=13% Similarity=0.017 Sum_probs=60.2
Q ss_pred cEEEEECCCCcEEEecCCCCCCCCccceEEEEe-CCEEEEEeccCCCCCccccEEEEEcCCCCCcEEEEEecCCCCCCCc
Q 002047 151 DVHCYDVLTNKWSRITPFGEPPTPRAAHVATAV-GTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGPRY 229 (975)
Q Consensus 151 dv~~yD~~t~~W~~l~~~g~~P~pR~~hsa~~~-~~~iyv~GG~~~~~~~~~dv~~yD~~t~~~~W~~v~~~g~~P~~R~ 229 (975)
.+..||..+..-...-.. .. ..-.+++.. ++.+++.|+. ...+.+||+.+.. .-..+. ....
T Consensus 638 ~i~vw~~~~~~~~~~~~~---h~-~~v~~~~~s~~~~~l~s~~~------d~~v~vwd~~~~~-~~~~~~------~~~~ 700 (1249)
T 3sfz_A 638 TLQVFKAETGEKLLDIKA---HE-DEVLCCAFSSDDSYIATCSA------DKKVKIWDSATGK-LVHTYD------EHSE 700 (1249)
T ss_dssp CEEEEETTTCCEEEEECC---CS-SCEEEEEECTTSSEEEEEET------TSEEEEEETTTCC-EEEEEE------CCSS
T ss_pred eEEEEECCCCCEEEEecc---CC-CCEEEEEEecCCCEEEEEeC------CCeEEEEECCCCc-eEEEEc------CCCC
Confidence 678899887764332111 11 111122222 4466666664 3469999998764 112221 1111
Q ss_pred ccEEEEe-C--CcEEEEEcCCCCCCCCCcEEEEECCCCCcEEEEccCCCCCCCCcceeEEEEEeCCeEEEecCCCC
Q 002047 230 GHVMALV-G--QRYLMAIGGNDGKRPLADVWALDTAAKPYEWRKLEPEGEGPPPCMYATASARSDGLLLLCGGRDA 302 (975)
Q Consensus 230 ~h~~~~~-~--~~~lyV~GG~~g~~~~ndv~~yDl~s~~~~W~~v~~~~~~P~~r~~~~a~~~~~g~lyvfGG~~~ 302 (975)
.-.++.+ . +..+++.|+.++ .+..||+.+. +....-.... ......+...++.+++.|+.++
T Consensus 701 ~v~~~~~~~~~~~~~l~sg~~d~-----~v~vwd~~~~--~~~~~~~~h~----~~v~~~~~sp~~~~l~s~s~dg 765 (1249)
T 3sfz_A 701 QVNCCHFTNKSNHLLLATGSNDF-----FLKLWDLNQK--ECRNTMFGHT----NSVNHCRFSPDDELLASCSADG 765 (1249)
T ss_dssp CEEEEEECSSSSCCEEEEEETTS-----CEEEEETTSS--SEEEEECCCS----SCEEEEEECSSTTEEEEEESSS
T ss_pred cEEEEEEecCCCceEEEEEeCCC-----eEEEEECCCc--chhheecCCC----CCEEEEEEecCCCEEEEEECCC
Confidence 2222333 2 334666666554 5888999877 3222111111 1122233344667777777553
No 193
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=71.81 E-value=86 Score=31.45 Aligned_cols=177 Identities=10% Similarity=-0.047 Sum_probs=83.0
Q ss_pred CcEEEEECCCCcEEEecCCCCCCCCccceEEEEe-CCEEEEEeccCCCCCccccEEEEEcCCCCCcEEEEEecCCCCCCC
Q 002047 150 ADVHCYDVLTNKWSRITPFGEPPTPRAAHVATAV-GTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGPR 228 (975)
Q Consensus 150 ~dv~~yD~~t~~W~~l~~~g~~P~pR~~hsa~~~-~~~iyv~GG~~~~~~~~~dv~~yD~~t~~~~W~~v~~~g~~P~~R 228 (975)
+.+++||..+......... ....-++++.. ++.+|+... ...+++||..... ...+. .....
T Consensus 46 ~~i~~~~~~~~~~~~~~~~----~~~~p~~i~~~~~g~l~v~~~-------~~~i~~~d~~~~~--~~~~~----~~~~~ 108 (270)
T 1rwi_B 46 GRVVKLATGSTGTTVLPFN----GLYQPQGLAVDGAGTVYVTDF-------NNRVVTLAAGSNN--QTVLP----FDGLN 108 (270)
T ss_dssp CEEEEECC-----EECCCC----SCCSCCCEEECTTCCEEEEET-------TTEEEEECTTCSC--CEECC----CCSCS
T ss_pred CcEEEecCCCcccceEeeC----CcCCcceeEECCCCCEEEEcC-------CCEEEEEeCCCce--Eeeee----cCCcC
Confidence 3677788776655444321 11122344444 347887754 1468899987753 22221 11112
Q ss_pred cccEEEEeCCcEEEEEcCCCCCCCCCcEEEEECCCCCcEEEEccCCCCCCCCcceeEEEEEeCCeEEEecCCCCCCCCcc
Q 002047 229 YGHVMALVGQRYLMAIGGNDGKRPLADVWALDTAAKPYEWRKLEPEGEGPPPCMYATASARSDGLLLLCGGRDASSVPLA 308 (975)
Q Consensus 229 ~~h~~~~~~~~~lyV~GG~~g~~~~ndv~~yDl~s~~~~W~~v~~~~~~P~~r~~~~a~~~~~g~lyvfGG~~~~~~~l~ 308 (975)
.-+.+++..++.||+.... .+.+++||..+. .......... ..-...+...++++|+.... ..
T Consensus 109 ~p~~i~~~~~g~l~v~~~~-----~~~i~~~~~~~~--~~~~~~~~~~----~~p~~i~~~~~g~l~v~~~~------~~ 171 (270)
T 1rwi_B 109 YPEGLAVDTQGAVYVADRG-----NNRVVKLAAGSK--TQTVLPFTGL----NDPDGVAVDNSGNVYVTDTD------NN 171 (270)
T ss_dssp SEEEEEECTTCCEEEEEGG-----GTEEEEECTTCC--SCEECCCCSC----CSCCCEEECTTCCEEEEEGG------GT
T ss_pred CCcceEECCCCCEEEEECC-----CCEEEEEECCCc--eeEeeccccC----CCceeEEEeCCCCEEEEECC------CC
Confidence 2334444444578887532 246888987665 3333221111 01112223336788886532 13
Q ss_pred ceEEeecCCCCeEEEEECCCCCCCCcceeeEEEe-CCEEEEEcCcCCCCCccccCCcEEEEECCCCe
Q 002047 309 SAYGLAKHRDGRWEWAIAPGVSPSPRYQHAAVFV-NARLHVSGGALGGGRMVEDSSSVAVLDTAAGV 374 (975)
Q Consensus 309 d~~~~~~~~~~~W~w~~~~g~~P~~R~~hs~v~~-~~~L~V~GG~~~~~~~~~~~~dv~~yD~~t~~ 374 (975)
.++.++........ ..... . ..-.++++. ++.|||.... .+.|++||+.+..
T Consensus 172 ~i~~~~~~~~~~~~--~~~~~--~-~~p~~i~~d~~g~l~v~~~~---------~~~v~~~~~~~~~ 224 (270)
T 1rwi_B 172 RVVKLEAESNNQVV--LPFTD--I-TAPWGIAVDEAGTVYVTEHN---------TNQVVKLLAGSTT 224 (270)
T ss_dssp EEEEECTTTCCEEE--CCCSS--C-CSEEEEEECTTCCEEEEETT---------TSCEEEECTTCSC
T ss_pred EEEEEecCCCceEe--ecccC--C-CCceEEEECCCCCEEEEECC---------CCcEEEEcCCCCc
Confidence 45666554432111 11111 1 122233443 3578886532 2348899987654
No 194
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=71.31 E-value=1e+02 Score=32.01 Aligned_cols=185 Identities=10% Similarity=0.002 Sum_probs=85.9
Q ss_pred CcEEEEECCCCcE--EEecCCCCCCCCccceEEEEe--CCEEEEEeccCCCCCccccEEEEEcCCCCCcEEEEEecCCCC
Q 002047 150 ADVHCYDVLTNKW--SRITPFGEPPTPRAAHVATAV--GTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGP 225 (975)
Q Consensus 150 ~dv~~yD~~t~~W--~~l~~~g~~P~pR~~hsa~~~--~~~iyv~GG~~~~~~~~~dv~~yD~~t~~~~W~~v~~~g~~P 225 (975)
+.++.||+.+.+. ..+... ..+ .++++.. ++.+| .+... .....+++||+.+.. .......+
T Consensus 62 ~~i~~~d~~~~~~~~~~~~~~---~~~--~~~~~~s~dg~~l~-~~~~~---~~~~~i~v~d~~~~~--~~~~~~~~--- 127 (331)
T 3u4y_A 62 QTLVQIETQLEPPKVVAIQEG---QSS--MADVDITPDDQFAV-TVTGL---NHPFNMQSYSFLKNK--FISTIPIP--- 127 (331)
T ss_dssp CEEEEEECSSSSCEEEEEEEC---SSC--CCCEEECTTSSEEE-ECCCS---SSSCEEEEEETTTTE--EEEEEECC---
T ss_pred CeEEEEECCCCceeEEecccC---CCC--ccceEECCCCCEEE-EecCC---CCcccEEEEECCCCC--eEEEEECC---
Confidence 3789999988774 223221 122 2213333 33666 33221 011379999998763 33222122
Q ss_pred CCCcccEEEEeCCc-EEEEEcCCCCCCCCCc-EEEEECCCCCcEE---EEccCCCCCCCCcceeEEEEEeCCe-EEEecC
Q 002047 226 GPRYGHVMALVGQR-YLMAIGGNDGKRPLAD-VWALDTAAKPYEW---RKLEPEGEGPPPCMYATASARSDGL-LLLCGG 299 (975)
Q Consensus 226 ~~R~~h~~~~~~~~-~lyV~GG~~g~~~~nd-v~~yDl~s~~~~W---~~v~~~~~~P~~r~~~~a~~~~~g~-lyvfGG 299 (975)
..-+.++...++ +||+.+..+ +. +++||+....... ......+. .-...+...+++ +|+.+.
T Consensus 128 --~~~~~~~~spdg~~l~~~~~~~-----~~~i~~~~~~~~g~~~~~~~~~~~~~~-----~~~~~~~spdg~~l~v~~~ 195 (331)
T 3u4y_A 128 --YDAVGIAISPNGNGLILIDRSS-----ANTVRRFKIDADGVLFDTGQEFISGGT-----RPFNITFTPDGNFAFVANL 195 (331)
T ss_dssp --TTEEEEEECTTSSCEEEEEETT-----TTEEEEEEECTTCCEEEEEEEEECSSS-----SEEEEEECTTSSEEEEEET
T ss_pred --CCccceEECCCCCEEEEEecCC-----CceEEEEEECCCCcEeecCCccccCCC-----CccceEECCCCCEEEEEeC
Confidence 122445444433 577775432 34 6777765431111 11111111 122333334554 777654
Q ss_pred CCCCCCCccceEEeecCCCCe---EEEEECCCCCCCCcceeeEEEe-CC-EEEEEcCcCCCCCccccCCcEEEEECCCCe
Q 002047 300 RDASSVPLASAYGLAKHRDGR---WEWAIAPGVSPSPRYQHAAVFV-NA-RLHVSGGALGGGRMVEDSSSVAVLDTAAGV 374 (975)
Q Consensus 300 ~~~~~~~l~d~~~~~~~~~~~---W~w~~~~g~~P~~R~~hs~v~~-~~-~L~V~GG~~~~~~~~~~~~dv~~yD~~t~~ 374 (975)
.+ +.+..++...... ...... + ..-..+++. ++ .||+.... .+.++++|+++.+
T Consensus 196 ~~------~~v~v~d~~~~~~~~~~~~~~~-~-----~~~~~~~~spdg~~l~v~~~~---------~~~i~~~d~~~~~ 254 (331)
T 3u4y_A 196 IG------NSIGILETQNPENITLLNAVGT-N-----NLPGTIVVSRDGSTVYVLTES---------TVDVFNFNQLSGT 254 (331)
T ss_dssp TT------TEEEEEECSSTTSCEEEEEEEC-S-----SCCCCEEECTTSSEEEEECSS---------EEEEEEEETTTTE
T ss_pred CC------CeEEEEECCCCcccceeeeccC-C-----CCCceEEECCCCCEEEEEEcC---------CCEEEEEECCCCc
Confidence 22 2355555443321 121221 1 111233333 34 47765431 2348999999998
Q ss_pred EEEcccC
Q 002047 375 WCDTKSV 381 (975)
Q Consensus 375 W~~v~~~ 381 (975)
...+...
T Consensus 255 ~~~~~~~ 261 (331)
T 3u4y_A 255 LSFVKSF 261 (331)
T ss_dssp EEEEEEE
T ss_pred eeeeccc
Confidence 8666544
No 195
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=71.05 E-value=1.7e+02 Score=34.65 Aligned_cols=211 Identities=10% Similarity=-0.025 Sum_probs=96.8
Q ss_pred cCcEEEEECCCCcEEEecCCCCCC-CCccceEEEEe--CCEEEEEeccCCCCCccccEEEEEcCCCCCcEEEEEecCCCC
Q 002047 149 TADVHCYDVLTNKWSRITPFGEPP-TPRAAHVATAV--GTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGP 225 (975)
Q Consensus 149 ~~dv~~yD~~t~~W~~l~~~g~~P-~pR~~hsa~~~--~~~iyv~GG~~~~~~~~~dv~~yD~~t~~~~W~~v~~~g~~P 225 (975)
...+|+.+.....|+.+-...... ..........+ +++.++++... .+.....++++|+.+.. .......+
T Consensus 97 ~~~l~~~~~~~~~~~~lld~~~l~~~~~~~~~~~~~SPDg~~la~~~~~-~G~~~~~i~v~d~~tg~--~~~~~~~~--- 170 (710)
T 2xdw_A 97 QRVLYVQDSLEGEARVFLDPNILSDDGTVALRGYAFSEDGEYFAYGLSA-SGSDWVTIKFMKVDGAK--ELPDVLER--- 170 (710)
T ss_dssp SCEEEEESSTTSCCEEEECGGGGCTTSCEEEEEEEECTTSSEEEEEEEE-TTCSCEEEEEEETTTTE--EEEEEEEE---
T ss_pred EEEEEEEcCCCCCcEEEECHHHhccCCCEEEEEEEECCCCCEEEEEEcC-CCCceEEEEEEECCCCC--CCcccccC---
Confidence 446788777777777653211000 01111122222 44444444321 12223489999998863 54432111
Q ss_pred CCCcccEEEEeCCcEEEEEcCCCCC-----------CCCCcEEEEECCCCCcEEEEccCCCCCCCCcceeEEEEEeCCeE
Q 002047 226 GPRYGHVMALVGQRYLMAIGGNDGK-----------RPLADVWALDTAAKPYEWRKLEPEGEGPPPCMYATASARSDGLL 294 (975)
Q Consensus 226 ~~R~~h~~~~~~~~~lyV~GG~~g~-----------~~~ndv~~yDl~s~~~~W~~v~~~~~~P~~r~~~~a~~~~~g~l 294 (975)
.. ....+...+++.++++..+.. .....||++++.+....-..+..... .+..........+++.
T Consensus 171 -~~-~~~~~wspDg~~l~~~~~~~~~~~~~~~~~~~~~~~~v~~~~l~t~~~~~~~v~~~~~--~~~~~~~~~~SpDg~~ 246 (710)
T 2xdw_A 171 -VK-FSCMAWTHDGKGMFYNAYPQQDGKSDGTETSTNLHQKLYYHVLGTDQSEDILCAEFPD--EPKWMGGAELSDDGRY 246 (710)
T ss_dssp -EC-SCCEEECTTSSEEEEEECCCCSSCCSSSCCCCCCCCEEEEEETTSCGGGCEEEECCTT--CTTCEEEEEECTTSCE
T ss_pred -cc-cceEEEEeCCCEEEEEEECCccccccccccccCCCCEEEEEECCCCcccceEEeccCC--CCeEEEEEEEcCCCCE
Confidence 11 122333323333344333322 23456999999876211112211111 1122333444556655
Q ss_pred EEecCCCCCCCCccceEEeecCC-------CCeEEEEECCCCCCCCcceeeEEEeCCEEEEEcCcCCCCCccccCCcEEE
Q 002047 295 LLCGGRDASSVPLASAYGLAKHR-------DGRWEWAIAPGVSPSPRYQHAAVFVNARLHVSGGALGGGRMVEDSSSVAV 367 (975)
Q Consensus 295 yvfGG~~~~~~~l~d~~~~~~~~-------~~~W~w~~~~g~~P~~R~~hs~v~~~~~L~V~GG~~~~~~~~~~~~dv~~ 367 (975)
+++....... ..+++|.++... ...+..+.... .. ........++.||+.+..+.. ...|++
T Consensus 247 l~~~~~~~~~-~~~~l~~~d~~~~~~~~~~~~~~~~l~~~~---~~-~~~~~s~dg~~l~~~s~~~~~------~~~l~~ 315 (710)
T 2xdw_A 247 VLLSIREGCD-PVNRLWYCDLQQESNGITGILKWVKLIDNF---EG-EYDYVTNEGTVFTFKTNRHSP------NYRLIN 315 (710)
T ss_dssp EEEEEECSSS-SCCEEEEEEGGGSSSSSCSSCCCEEEECSS---SS-CEEEEEEETTEEEEEECTTCT------TCEEEE
T ss_pred EEEEEEccCC-CccEEEEEECcccccccCCccceEEeeCCC---Cc-EEEEEeccCCEEEEEECCCCC------CCEEEE
Confidence 5554432211 135677766543 11344333221 11 112233346788888654321 356999
Q ss_pred EECCCC---eEEEccc
Q 002047 368 LDTAAG---VWCDTKS 380 (975)
Q Consensus 368 yD~~t~---~W~~v~~ 380 (975)
+|+.+. .|..+..
T Consensus 316 ~d~~~~~~~~~~~l~~ 331 (710)
T 2xdw_A 316 IDFTDPEESKWKVLVP 331 (710)
T ss_dssp EETTSCCGGGCEEEEC
T ss_pred EeCCCCCcccceeccC
Confidence 999876 4877643
No 196
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=70.78 E-value=96 Score=31.57 Aligned_cols=189 Identities=6% Similarity=0.049 Sum_probs=90.7
Q ss_pred CcEEEEECCCCcEEEecCCCCCCCC-ccceEEEEe--CCEEEEEeccCCCCCccccEEEEEcCCCCCcEEEEEecCCCCC
Q 002047 150 ADVHCYDVLTNKWSRITPFGEPPTP-RAAHVATAV--GTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPG 226 (975)
Q Consensus 150 ~dv~~yD~~t~~W~~l~~~g~~P~p-R~~hsa~~~--~~~iyv~GG~~~~~~~~~dv~~yD~~t~~~~W~~v~~~g~~P~ 226 (975)
..+++||+.......+...+..+.. ..-++++.. ++.+|+.+.. ....+++||.... ....+. . +.
T Consensus 51 ~~i~~~d~~g~~~~~~~~~~~~~~~~~~p~~i~~~~~~g~l~v~~~~-----~~~~i~~~d~~g~--~~~~~~---~-~~ 119 (286)
T 1q7f_A 51 HRIQIFDKEGRFKFQFGECGKRDSQLLYPNRVAVVRNSGDIIVTERS-----PTHQIQIYNQYGQ--FVRKFG---A-TI 119 (286)
T ss_dssp TEEEEECTTSCEEEEECCBSSSTTCBSSEEEEEEETTTTEEEEEECG-----GGCEEEEECTTSC--EEEEEC---T-TT
T ss_pred CEEEEECCCCcEEEEecccCCCcccccCceEEEEEcCCCeEEEEcCC-----CCCEEEEECCCCc--EEEEec---C-cc
Confidence 3678888875554444332211111 122344442 4688888632 1346889995443 122221 1 11
Q ss_pred CCcccEEEEeCCcEEEEEcCCCCCCCCCcEEEEECCCCCcEEEEccCCCCCCCCcceeEEEEEeCCeEEEecCCCCCCCC
Q 002047 227 PRYGHVMALVGQRYLMAIGGNDGKRPLADVWALDTAAKPYEWRKLEPEGEGPPPCMYATASARSDGLLLLCGGRDASSVP 306 (975)
Q Consensus 227 ~R~~h~~~~~~~~~lyV~GG~~g~~~~ndv~~yDl~s~~~~W~~v~~~~~~P~~r~~~~a~~~~~g~lyvfGG~~~~~~~ 306 (975)
...-+.+++..++.+||....+ +.+++||+... ....+...... ..-...+...++.+|+....
T Consensus 120 ~~~~~~i~~~~~g~l~v~~~~~-----~~i~~~~~~g~--~~~~~~~~~~~---~~p~~i~~~~~g~l~v~~~~------ 183 (286)
T 1q7f_A 120 LQHPRGVTVDNKGRIIVVECKV-----MRVIIFDQNGN--VLHKFGCSKHL---EFPNGVVVNDKQEIFISDNR------ 183 (286)
T ss_dssp CSCEEEEEECTTSCEEEEETTT-----TEEEEECTTSC--EEEEEECTTTC---SSEEEEEECSSSEEEEEEGG------
T ss_pred CCCceEEEEeCCCCEEEEECCC-----CEEEEEcCCCC--EEEEeCCCCcc---CCcEEEEECCCCCEEEEECC------
Confidence 1222344444445788875432 47899998655 33333221110 11122333346788887542
Q ss_pred ccceEEeecCCCCeEEEEEC-CCCCCCCcceeeEEEe-CCEEEEEcCcCCCCCccccCCcEEEEECCCCeEEEc
Q 002047 307 LASAYGLAKHRDGRWEWAIA-PGVSPSPRYQHAAVFV-NARLHVSGGALGGGRMVEDSSSVAVLDTAAGVWCDT 378 (975)
Q Consensus 307 l~d~~~~~~~~~~~W~w~~~-~g~~P~~R~~hs~v~~-~~~L~V~GG~~~~~~~~~~~~dv~~yD~~t~~W~~v 378 (975)
...++.|+... ...+... .+. ...-.++++- ++.|||....++ ..|.+||+....-..+
T Consensus 184 ~~~i~~~~~~g--~~~~~~~~~g~---~~~p~~i~~d~~G~l~v~~~~~~--------~~i~~~~~~g~~~~~~ 244 (286)
T 1q7f_A 184 AHCVKVFNYEG--QYLRQIGGEGI---TNYPIGVGINSNGEILIADNHNN--------FNLTIFTQDGQLISAL 244 (286)
T ss_dssp GTEEEEEETTC--CEEEEESCTTT---SCSEEEEEECTTCCEEEEECSSS--------CEEEEECTTSCEEEEE
T ss_pred CCEEEEEcCCC--CEEEEEccCCc---cCCCcEEEECCCCCEEEEeCCCC--------EEEEEECCCCCEEEEE
Confidence 23456665432 2222221 111 1112233333 568888754211 1588999766544333
No 197
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=70.78 E-value=1.1e+02 Score=32.02 Aligned_cols=99 Identities=13% Similarity=0.190 Sum_probs=53.3
Q ss_pred CcEEEEECCCCcEEEecCCCCCCCCccceEEEE--e-CCEEEEEeccCCCCCccccEEEEEcCCCCCcEEEEEecCCCCC
Q 002047 150 ADVHCYDVLTNKWSRITPFGEPPTPRAAHVATA--V-GTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPG 226 (975)
Q Consensus 150 ~dv~~yD~~t~~W~~l~~~g~~P~pR~~hsa~~--~-~~~iyv~GG~~~~~~~~~dv~~yD~~t~~~~W~~v~~~g~~P~ 226 (975)
..+.+||+.+.....+... ...-.+++. . ++.+++.|+. ...+.+||+.+..... .+. .+
T Consensus 108 g~v~iwd~~~~~~~~~~~~-----~~~v~~~~~~~~~~~~~l~~~~~------dg~i~vwd~~~~~~~~-~~~----~~- 170 (368)
T 3mmy_A 108 KTAKMWDLSSNQAIQIAQH-----DAPVKTIHWIKAPNYSCVMTGSW------DKTLKFWDTRSSNPMM-VLQ----LP- 170 (368)
T ss_dssp SEEEEEETTTTEEEEEEEC-----SSCEEEEEEEECSSCEEEEEEET------TSEEEEECSSCSSCSE-EEE----CS-
T ss_pred CcEEEEEcCCCCceeeccc-----cCceEEEEEEeCCCCCEEEEccC------CCcEEEEECCCCcEEE-EEe----cC-
Confidence 3688899998876665332 111222232 2 4477777775 3569999998764222 222 11
Q ss_pred CCcccEEEEeCCcEEEEEcCCCCCCCCCcEEEEECCCCCcEEEEccC
Q 002047 227 PRYGHVMALVGQRYLMAIGGNDGKRPLADVWALDTAAKPYEWRKLEP 273 (975)
Q Consensus 227 ~R~~h~~~~~~~~~lyV~GG~~g~~~~ndv~~yDl~s~~~~W~~v~~ 273 (975)
....+.....+ .+++.+ .+ ..+..||+......+..+..
T Consensus 171 -~~~~~~~~~~~-~~~~~~-~~-----~~i~~~~~~~~~~~~~~~~~ 209 (368)
T 3mmy_A 171 -ERCYCADVIYP-MAVVAT-AE-----RGLIVYQLENQPSEFRRIES 209 (368)
T ss_dssp -SCEEEEEEETT-EEEEEE-GG-----GCEEEEECSSSCEEEEECCC
T ss_pred -CCceEEEecCC-eeEEEe-CC-----CcEEEEEeccccchhhhccc
Confidence 12223333344 444433 22 35788888776545655543
No 198
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=70.34 E-value=1.1e+02 Score=35.81 Aligned_cols=206 Identities=13% Similarity=0.001 Sum_probs=95.0
Q ss_pred CcEEEEECC--C-CcEEEecCCCCC-CCCccceEEEEeCCEEEEEeccCC----CCCccccEEEEEcCC------CCCcE
Q 002047 150 ADVHCYDVL--T-NKWSRITPFGEP-PTPRAAHVATAVGTMVVIQGGIGP----AGLSAEDLHVLDLTQ------QRPRW 215 (975)
Q Consensus 150 ~dv~~yD~~--t-~~W~~l~~~g~~-P~pR~~hsa~~~~~~iyv~GG~~~----~~~~~~dv~~yD~~t------~~~~W 215 (975)
..+|.+|+. . .....+...... ...+....+..-+++.+++..... ......+++++|+.+ .. .
T Consensus 102 ~~l~~~~~~~~g~~~~~~l~~~~~~~~~~~~~~~~~spDg~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~--~ 179 (662)
T 3azo_A 102 QRLYAFEPDAPGGAVPRPLTPVSAVGGGLRWADPVLLPERGEVWCMAEEFTGEGPSDVRRFLAAVPLDGSAAADRSA--V 179 (662)
T ss_dssp CCEEEECTTSTTCCCCEECSCCCCSTTCEEEEEEEEETTTTEEEEEEEEECSSSTTCEEEEEEEEETTSTTTTCGGG--S
T ss_pred CeEEEEcCCCCCCCCCEeccCCccCCCCccccCcEECCCCCEEEEEEecccCCCCCCceeEEEEEECCCCccccCCc--e
Confidence 468888887 4 666666543100 011222222222444333433210 112346899999987 42 3
Q ss_pred EEEEecCCCCCCCcccEEEEeCCcEEEEEcCCCCCC--CCCcEEEEECC-CCCc-EEEEccCCCCCCCCcceeEEEEEeC
Q 002047 216 HRVVVQGPGPGPRYGHVMALVGQRYLMAIGGNDGKR--PLADVWALDTA-AKPY-EWRKLEPEGEGPPPCMYATASARSD 291 (975)
Q Consensus 216 ~~v~~~g~~P~~R~~h~~~~~~~~~lyV~GG~~g~~--~~ndv~~yDl~-s~~~-~W~~v~~~~~~P~~r~~~~a~~~~~ 291 (975)
..+...+ ..........-++++|++........ ...++|++|+. +... +...+..... ..........+
T Consensus 180 ~~l~~~~---~~~~~~~~~SpDG~~la~~~~~~~~~~~~~~~i~~~d~~~~g~~~~~~~l~~~~~----~~~~~~~~spd 252 (662)
T 3azo_A 180 RELSDDA---HRFVTGPRLSPDGRQAVWLAWDHPRMPWEGTELKTARVTEDGRFADTRTLLGGPE----EAIAQAEWAPD 252 (662)
T ss_dssp EESSCSC---SSEECCCEECTTSSEEEEEEECTTCCTTTCEEEEEEEECTTSCEEEEEEEEEETT----BCEEEEEECTT
T ss_pred eEEEecC---CCcccCceECCCCCEEEEEECCCCCCCCCCcEEEEEEECCCCcccccEEeCCCCC----ceEcceEECCC
Confidence 3332011 11111122222343444443222111 13589999998 4410 2333322111 12222333447
Q ss_pred CeEEEecCCCCCCCCccceEEeecCCCCeEEEEECCCCC-----CCCcc-eeeEEEe-CCEEEEEcCcCCCCCccccCCc
Q 002047 292 GLLLLCGGRDASSVPLASAYGLAKHRDGRWEWAIAPGVS-----PSPRY-QHAAVFV-NARLHVSGGALGGGRMVEDSSS 364 (975)
Q Consensus 292 g~lyvfGG~~~~~~~l~d~~~~~~~~~~~W~w~~~~g~~-----P~~R~-~hs~v~~-~~~L~V~GG~~~~~~~~~~~~d 364 (975)
+++|+.+..++ ...+|.++... +.+ ..+.... |.-.. ..+.++. ++++++.+.. + ...
T Consensus 253 g~l~~~~~~~~----~~~l~~~~~~~-~~~--~~l~~~~~~~~~p~w~~~~~~~~~~~~~~~~~~~~~-~-------~~~ 317 (662)
T 3azo_A 253 GSLIVATDRTG----WWNLHRVDPAT-GAA--TQLCRREEEFAGPLWTPGMRWFAPLANGLIAVVHGK-G-------AAV 317 (662)
T ss_dssp SCEEEEECTTS----SCEEEEECTTT-CCE--EESSCCSSBSSCCCCSTTCCSEEECTTSCEEEEEBS-S-------SCE
T ss_pred CeEEEEECCCC----CeEEEEEECCC-Cce--eecccccccccCccccccCceEeEeCCCEEEEEEEc-C-------ccE
Confidence 77777765543 23577776533 333 3332210 11110 1234444 6777777654 2 346
Q ss_pred EEEEECCCCeEEEcc
Q 002047 365 VAVLDTAAGVWCDTK 379 (975)
Q Consensus 365 v~~yD~~t~~W~~v~ 379 (975)
+|.+|+.+.....+.
T Consensus 318 l~~~d~~~~~~~~l~ 332 (662)
T 3azo_A 318 LGILDPESGELVDAA 332 (662)
T ss_dssp EEEEETTTTEEEECC
T ss_pred EEEEECCCCcEEEec
Confidence 999999988876654
No 199
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=70.14 E-value=6.9 Score=42.65 Aligned_cols=28 Identities=4% Similarity=0.003 Sum_probs=15.6
Q ss_pred CCEEEEEeccCCCCCccccEEEEEcCCC
Q 002047 184 GTMVVIQGGIGPAGLSAEDLHVLDLTQQ 211 (975)
Q Consensus 184 ~~~iyv~GG~~~~~~~~~dv~~yD~~t~ 211 (975)
++++++.|+..........+++|+..+.
T Consensus 53 DG~~las~s~d~~~~wd~~v~~~~~~~~ 80 (357)
T 4g56_B 53 DGALLLAASSLSSRTWGGSIWVFKDPEG 80 (357)
T ss_dssp SSCEEEEEECSSSSSCCEEEEEESSCC-
T ss_pred CCCEEEEEcCCCCccccCeEEEEECCCC
Confidence 5577777774322222345778876654
No 200
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=69.01 E-value=80 Score=32.46 Aligned_cols=66 Identities=12% Similarity=0.062 Sum_probs=36.1
Q ss_pred CEEEEEeccCCCCCccccEEEEEcCCCCCcEEEEEecCCCCCCCcccEEEEeC---CcEEEEEcCCCCCCCCCcEEEEEC
Q 002047 185 TMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGPRYGHVMALVG---QRYLMAIGGNDGKRPLADVWALDT 261 (975)
Q Consensus 185 ~~iyv~GG~~~~~~~~~dv~~yD~~t~~~~W~~v~~~g~~P~~R~~h~~~~~~---~~~lyV~GG~~g~~~~ndv~~yDl 261 (975)
+.+++.|+. ...+.+||+.+....|..+.. +......-.++.+. ++.+++.|+.++ .+..||+
T Consensus 23 ~~~l~~~~~------dg~i~iw~~~~~~~~~~~~~~---~~~~~~~v~~~~~~~~~d~~~l~s~~~dg-----~v~vwd~ 88 (351)
T 3f3f_A 23 GRHVATCSS------DQHIKVFKLDKDTSNWELSDS---WRAHDSSIVAIDWASPEYGRIIASASYDK-----TVKLWEE 88 (351)
T ss_dssp SSEEEEEET------TSEEEEEEECSSSCCEEEEEE---EECCSSCEEEEEECCGGGCSEEEEEETTS-----CEEEEEE
T ss_pred CCEEEEeeC------CCeEEEEECCCCCCcceecce---eccCCCcEEEEEEcCCCCCCEEEEEcCCC-----eEEEEec
Confidence 455666664 346888998865445655442 11122222333332 236777777764 4677777
Q ss_pred CCC
Q 002047 262 AAK 264 (975)
Q Consensus 262 ~s~ 264 (975)
.+.
T Consensus 89 ~~~ 91 (351)
T 3f3f_A 89 DPD 91 (351)
T ss_dssp CTT
T ss_pred CCC
Confidence 653
No 201
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=68.19 E-value=1.2e+02 Score=31.50 Aligned_cols=169 Identities=9% Similarity=0.148 Sum_probs=84.2
Q ss_pred CcEEEEECC-CCcEEEecCCCCCCCCccceEEEEe-CCEEEEEeccCCCCCccccEEEEEcCCCCCcEEEEEecCCCCCC
Q 002047 150 ADVHCYDVL-TNKWSRITPFGEPPTPRAAHVATAV-GTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGP 227 (975)
Q Consensus 150 ~dv~~yD~~-t~~W~~l~~~g~~P~pR~~hsa~~~-~~~iyv~GG~~~~~~~~~dv~~yD~~t~~~~W~~v~~~g~~P~~ 227 (975)
..+++||+. ...|...... + ...+.+.. ++.||+. .. ...+++||.. ....|.... +..
T Consensus 117 ~~l~~~d~~g~~~~~~~~~~---~---~~~~~~~~~~g~l~vg-t~------~~~l~~~d~~-g~~~~~~~~-----~~~ 177 (330)
T 3hxj_A 117 GHLYAINTDGTEKWRFKTKK---A---IYATPIVSEDGTIYVG-SN------DNYLYAINPD-GTEKWRFKT-----NDA 177 (330)
T ss_dssp SEEEEECTTSCEEEEEECSS---C---CCSCCEECTTSCEEEE-CT------TSEEEEECTT-SCEEEEEEC-----SSC
T ss_pred CEEEEEcCCCCEEEEEcCCC---c---eeeeeEEcCCCEEEEE-cC------CCEEEEECCC-CCEeEEEec-----CCC
Confidence 468889987 3457655322 1 12223444 4566663 21 2468999988 433565532 112
Q ss_pred CcccEEEEeCCcEEEEEcCCCCCCCCCcEEEEECCCCCcEEEEccCCCCCCCCcceeEEEEEeCCeEEEecCCCCCCCCc
Q 002047 228 RYGHVMALVGQRYLMAIGGNDGKRPLADVWALDTAAKPYEWRKLEPEGEGPPPCMYATASARSDGLLLLCGGRDASSVPL 307 (975)
Q Consensus 228 R~~h~~~~~~~~~lyV~GG~~g~~~~ndv~~yDl~s~~~~W~~v~~~~~~P~~r~~~~a~~~~~g~lyvfGG~~~~~~~l 307 (975)
. -.+.+...++.||+.. ..+++|| .+....|+...... ...+.+...++.||+..- -
T Consensus 178 ~-~~~~~~d~~g~l~v~t--------~~l~~~d-~~g~~~~~~~~~~~------~~~~~~~~~~g~l~v~t~-------~ 234 (330)
T 3hxj_A 178 I-TSAASIGKDGTIYFGS--------DKVYAIN-PDGTEKWNFYAGYW------TVTRPAISEDGTIYVTSL-------D 234 (330)
T ss_dssp C-CSCCEECTTCCEEEES--------SSEEEEC-TTSCEEEEECCSSC------CCSCCEECTTSCEEEEET-------T
T ss_pred c-eeeeEEcCCCEEEEEe--------CEEEEEC-CCCcEEEEEccCCc------ceeceEECCCCeEEEEcC-------C
Confidence 1 2233343344677754 4689999 45445787653321 112222333567887531 1
Q ss_pred cceEEeecCCCCeEEEEECCCCCCCCcceeeEEEe-CCEEEEEcCcCCCCCccccCCcEEEEECCCC-eEE
Q 002047 308 ASAYGLAKHRDGRWEWAIAPGVSPSPRYQHAAVFV-NARLHVSGGALGGGRMVEDSSSVAVLDTAAG-VWC 376 (975)
Q Consensus 308 ~d~~~~~~~~~~~W~w~~~~g~~P~~R~~hs~v~~-~~~L~V~GG~~~~~~~~~~~~dv~~yD~~t~-~W~ 376 (975)
..++.++......|....... . ..+.++. ++.|||.. . ...+++||+... .|.
T Consensus 235 ~gl~~~~~~g~~~~~~~~~~~-----~-~~~~~~~~~g~l~v~t-~---------~ggl~~~d~~g~~~~~ 289 (330)
T 3hxj_A 235 GHLYAINPDGTEKWRFKTGKR-----I-ESSPVIGNTDTIYFGS-Y---------DGHLYAINPDGTEKWN 289 (330)
T ss_dssp TEEEEECTTSCEEEEEECSSC-----C-CSCCEECTTSCEEEEC-T---------TCEEEEECTTSCEEEE
T ss_pred CeEEEECCCCCEeEEeeCCCC-----c-cccceEcCCCeEEEec-C---------CCCEEEECCCCcEEEE
Confidence 246666543332343322111 1 1123334 57777642 1 224889997433 454
No 202
>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A
Probab=67.74 E-value=2e+02 Score=34.37 Aligned_cols=192 Identities=10% Similarity=0.027 Sum_probs=92.8
Q ss_pred cCcEEEEECCCCcEEEecCCCCCC--CCccceEEEEe-CCEEEEEeccCCCCCccccEEEEEcCCC----CCcEE---EE
Q 002047 149 TADVHCYDVLTNKWSRITPFGEPP--TPRAAHVATAV-GTMVVIQGGIGPAGLSAEDLHVLDLTQQ----RPRWH---RV 218 (975)
Q Consensus 149 ~~dv~~yD~~t~~W~~l~~~g~~P--~pR~~hsa~~~-~~~iyv~GG~~~~~~~~~dv~~yD~~t~----~~~W~---~v 218 (975)
..-+++||+.+++++......... ....-++.+.. ++.|+|. ..+ .-+++||..+. ...+. ..
T Consensus 391 ~~GL~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~d~~g~lWig-T~~------~Gl~~~~~~~~~~~~~~~~~~~~~~ 463 (758)
T 3ott_A 391 DGSINRYDYATRQFIHYNIVDNTGTYNTNWTYYIFEDTAGQLWIS-TCL------GGIFVVDKHKLMQSTSGQYIAEQNY 463 (758)
T ss_dssp TTEEEEEETTTTEEEEEEEECCC--CBSSSEEEEEECTTSEEEEE-ESS------SCEEEEEHHHHHHCCSSEEECSEEE
T ss_pred CCcHhhcCcCCCcEEEeecCCCcCCCCCceEEEEEEcCCCCEEEE-ECC------CceEEEccccccccCCcceeccccc
Confidence 356889999999888764211101 11122333333 3477773 221 23778886531 00121 11
Q ss_pred EecCCCCCCCcccEEEEeCCcEEEEEcCCCCCCCCCcEEEEECCCCCcEEEEccCCCCCCCCcceeEEEEEeCCeEEEec
Q 002047 219 VVQGPGPGPRYGHVMALVGQRYLMAIGGNDGKRPLADVWALDTAAKPYEWRKLEPEGEGPPPCMYATASARSDGLLLLCG 298 (975)
Q Consensus 219 ~~~g~~P~~R~~h~~~~~~~~~lyV~GG~~g~~~~ndv~~yDl~s~~~~W~~v~~~~~~P~~r~~~~a~~~~~g~lyvfG 298 (975)
.....++.. .-.+++.-.++.||++||.. +-+++||+.+. +++.+..... .......+.+.-.+|.||+..
T Consensus 464 ~~~~~l~~~-~i~~i~~d~~g~lWi~~~t~-----~Gl~~~d~~~~--~~~~~~~~~~-~~~~~~~~i~~d~~g~lWigt 534 (758)
T 3ott_A 464 SVHNGLSGM-FINQIIPDNEGNVWVLLYNN-----KGIDKINPRTR--EVTKLFADEL-TGEKSPNYLLCDEDGLLWVGF 534 (758)
T ss_dssp CGGGTCSCS-CEEEEEECTTSCEEEEETTC-----SSEEEEETTTT--EEEEECTTTS-CGGGCEEEEEECTTSCEEEEE
T ss_pred ccccccccc-eeeeEEEcCCCCEEEEccCC-----CCcEEEeCCCC--ceEEecCCCc-CCCcccceEEECCCCCEEEEe
Confidence 111122221 12233333445799866653 34899999998 8877643211 111112222333467888743
Q ss_pred CCCCCCCCccceEEeecCCCCeEEEEECCCCCCCCcceeeEEEeCCEEEEEcCcCCCCCccccCCcEEEEECCCCeEEEc
Q 002047 299 GRDASSVPLASAYGLAKHRDGRWEWAIAPGVSPSPRYQHAAVFVNARLHVSGGALGGGRMVEDSSSVAVLDTAAGVWCDT 378 (975)
Q Consensus 299 G~~~~~~~l~d~~~~~~~~~~~W~w~~~~g~~P~~R~~hs~v~~~~~L~V~GG~~~~~~~~~~~~dv~~yD~~t~~W~~v 378 (975)
. .-++.|++... .++.....+. |. ..-.+++.-++.|++... +.+.+||+++.+....
T Consensus 535 ~--------~Gl~~~~~~~~-~~~~~~~~gl-~~-~~i~~i~~~~g~lWi~t~-----------~Gl~~~~~~~~~~~~~ 592 (758)
T 3ott_A 535 H--------GGVMRINPKDE-SQQSISFGSF-SN-NEILSMTCVKNSIWVSTT-----------NGLWIIDRKTMDARQQ 592 (758)
T ss_dssp T--------TEEEEECC--C-CCCBCCCCC-----CCEEEEEEETTEEEEEES-----------SCEEEEETTTCCEEEC
T ss_pred c--------CceEEEecCCC-ceEEecccCC-Cc-cceEEEEECCCCEEEECC-----------CCeEEEcCCCceeEEe
Confidence 1 12556655433 2221111122 21 223344445788887531 2388999999887654
No 203
>3gve_A YFKN protein; alpha-beta-BETA-alpha sandwich, structural genomics, PSI-2, structure initiative; HET: CIT; 1.25A {Bacillus subtilis subsp}
Probab=67.68 E-value=3.2 Score=45.74 Aligned_cols=68 Identities=21% Similarity=0.200 Sum_probs=39.3
Q ss_pred cCCEEEEecCCCCHH----------------HHHHHHHHhCCCCCCCCccceeEEEeccccCCCCChH------------
Q 002047 697 KAPIKIFGDLHGQFG----------------DLMRLFDEYGSPSTAGDIAYIDYLFLGDYVDRGQHSL------------ 748 (975)
Q Consensus 697 ~~~i~vvGDiHG~~~----------------~L~~ll~~~g~~~~~~~~~~~~~vfLGDyVDRG~~s~------------ 748 (975)
+-.|+.+.|+||++. .+..+++.+.-.... .-+|..||.+...+.+-
T Consensus 11 ~l~Il~tnD~Hg~~~~~~~~~~~~~~~gG~ar~at~i~~~r~~~~~-----~llld~GD~~qGs~~~~~~~~~~~~~g~~ 85 (341)
T 3gve_A 11 HLSILATTDIHANMMDYDYYSDKETADFGLARTAQLIQKHREQNPN-----TLLVDNGDLIQGNPLGEYAVKYQKDDIIS 85 (341)
T ss_dssp EEEEEEECCCTTCCSSEETTTTEECSSCCHHHHHHHHHHHHHHCSS-----EEEEECSCCSCSSHHHHHHHHHHHHHHHH
T ss_pred EEEEEEEeccCCCccCccccCCCccccCCHHHHHHHHHHHHhcCCC-----EEEEecCccCCCcHHHHHhhhcccccccc
Confidence 346889999999873 344555544211111 13556999997654321
Q ss_pred -----HHHHHHHHhhhcCCCCEEEEeccccc
Q 002047 749 -----ETITLLLALKVEYPNNVHLIRGNHEA 774 (975)
Q Consensus 749 -----evl~ll~~lk~~~P~~v~llrGNHE~ 774 (975)
.++.+|-.|.. . .+..||||.
T Consensus 86 ~g~~~~~~~~ln~lg~----D-a~tlGNHEf 111 (341)
T 3gve_A 86 GTKTHPIISVMNALKY----D-AGTLGNHEF 111 (341)
T ss_dssp TSSCCHHHHHHHHTTC----C-BEECCGGGG
T ss_pred cccccHHHHHHHhhCC----C-eeeccchhh
Confidence 24455555432 2 345799997
No 204
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=67.34 E-value=1.3e+02 Score=31.56 Aligned_cols=137 Identities=12% Similarity=0.018 Sum_probs=69.4
Q ss_pred CcEEEEECCCCcEEEecCCCCCCCCccceEEEEe-CC-EEEEEeccCC---------------CC-----CccccEEEEE
Q 002047 150 ADVHCYDVLTNKWSRITPFGEPPTPRAAHVATAV-GT-MVVIQGGIGP---------------AG-----LSAEDLHVLD 207 (975)
Q Consensus 150 ~dv~~yD~~t~~W~~l~~~g~~P~pR~~hsa~~~-~~-~iyv~GG~~~---------------~~-----~~~~dv~~yD 207 (975)
..+|.+|+.+++...+... +. ....+.. ++ .|++...... .+ .....++++|
T Consensus 85 ~~l~~~~~~~g~~~~l~~~---~~---~~~~~wspdg~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~d 158 (347)
T 2gop_A 85 SEIWVADLETLSSKKILEA---KN---IRSLEWNEDSRKLLIVGFKRREDEDFIFEDDVPAWFDDLGFFDGEKTTFWIFD 158 (347)
T ss_dssp EEEEEEETTTTEEEEEEEE---SE---EEEEEECTTSSEEEEEEECCCC---------CCCC---------CEEEEEEEE
T ss_pred ceEEEEECCCCceEEEEcC---CC---ccceeECCCCCEEEEEEccCCCcCCcEEEcccceeecCcccccCccceEEEEE
Confidence 4699999999888777543 11 1222222 34 4544432100 00 1135799999
Q ss_pred cCCCCCcE-EEEEecCCCCCCCcccEEEEeCCcEEEEEcCCCCCC---C-CCcEEEEECCCCCcEEEEccCCCCCCCCcc
Q 002047 208 LTQQRPRW-HRVVVQGPGPGPRYGHVMALVGQRYLMAIGGNDGKR---P-LADVWALDTAAKPYEWRKLEPEGEGPPPCM 282 (975)
Q Consensus 208 ~~t~~~~W-~~v~~~g~~P~~R~~h~~~~~~~~~lyV~GG~~g~~---~-~ndv~~yDl~s~~~~W~~v~~~~~~P~~r~ 282 (975)
+.+.. . ..+.. + .....+...++ +++.+..+... . ..++|.+| +. ++..+... . .
T Consensus 159 ~~~~~--~~~~l~~----~---~~~~~~~spdg-~~~~~~~~~~~~~~~~~~~l~~~d--~~--~~~~l~~~-~-----~ 218 (347)
T 2gop_A 159 TESEE--VIEEFEK----P---RFSSGIWHRDK-IVVNVPHREIIPQYFKFWDIYIWE--DG--KEEKMFEK-V-----S 218 (347)
T ss_dssp TTTTE--EEEEEEE----E---TTCEEEEETTE-EEEEEECCCSSCCSSCCEEEEEEE--TT--EEEEEEEE-E-----S
T ss_pred CCCCe--EEeeecC----C---CcccccCCCCe-EEEEEecccccccccccccEEEeC--CC--ceEEeccC-c-----c
Confidence 98753 4 44542 2 23344455665 55555443221 2 56899999 56 77766432 1 1
Q ss_pred eeEEEEEeCCeEEEecCCCCC--CCCccceEEee
Q 002047 283 YATASARSDGLLLLCGGRDAS--SVPLASAYGLA 314 (975)
Q Consensus 283 ~~~a~~~~~g~lyvfGG~~~~--~~~l~d~~~~~ 314 (975)
.... ..+++.+++.+.... ......+|.++
T Consensus 219 -~~~~-spdg~~l~~~~~~~~~~~~~~~~l~~~d 250 (347)
T 2gop_A 219 -FYAV-DSDGERILLYGKPEKKYMSEHNKLYIYD 250 (347)
T ss_dssp -EEEE-EECSSCEEEEECCSSSCCCSSCEEEEEC
T ss_pred -eeeE-CCCCCEEEEEEccccCCccccceEEEEC
Confidence 1222 446654444443221 11235677776
No 205
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=67.27 E-value=1.1e+02 Score=30.94 Aligned_cols=180 Identities=7% Similarity=-0.030 Sum_probs=91.1
Q ss_pred CcEEEEECCCCcEEEecCCCCCCCCccceEEEEe-CCEEEEEeccCCCCCccccEEEEEcCCCCCcEEEEEecCCCCCCC
Q 002047 150 ADVHCYDVLTNKWSRITPFGEPPTPRAAHVATAV-GTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGPR 228 (975)
Q Consensus 150 ~dv~~yD~~t~~W~~l~~~g~~P~pR~~hsa~~~-~~~iyv~GG~~~~~~~~~dv~~yD~~t~~~~W~~v~~~g~~P~~R 228 (975)
..+++||+. .++..+.... ....-++++.. ++.+|+.... ...+++||.. .. ........ ...
T Consensus 83 ~~v~~~d~~-g~~~~~~~~~---~~~~~~~i~~~~~g~l~v~~~~------~~~i~~~~~~-g~--~~~~~~~~---~~~ 146 (300)
T 2qc5_A 83 NKIGKLSKK-GGFTEYPLPQ---PDSGPYGITEGLNGDIWFTQLN------GDRIGKLTAD-GT--IYEYDLPN---KGS 146 (300)
T ss_dssp TEEEEECTT-SCEEEEECSS---TTCCEEEEEECSTTCEEEEETT------TTEEEEECTT-SC--EEEEECSS---TTC
T ss_pred CeEEEECCC-CCeEEecCCC---CCCCCccceECCCCCEEEEccC------CCeEEEECCC-CC--EEEccCCC---CCC
Confidence 368889988 6666554221 11223444444 4578876532 2468889887 32 44443111 112
Q ss_pred cccEEEEeCCcEEEEEcCCCCCCCCCcEEEEECCCCCcEEEEccCCCCCCCCcceeEEEEE-eCCeEEEecCCCCCCCCc
Q 002047 229 YGHVMALVGQRYLMAIGGNDGKRPLADVWALDTAAKPYEWRKLEPEGEGPPPCMYATASAR-SDGLLLLCGGRDASSVPL 307 (975)
Q Consensus 229 ~~h~~~~~~~~~lyV~GG~~g~~~~ndv~~yDl~s~~~~W~~v~~~~~~P~~r~~~~a~~~-~~g~lyvfGG~~~~~~~l 307 (975)
.-+.++.-.++.||+.... .+.+++||+ +. ++..+..... ...-.+.+. .++.||+.... .
T Consensus 147 ~~~~i~~d~~g~l~v~~~~-----~~~i~~~~~-~g--~~~~~~~~~~----~~~~~~i~~d~~g~l~v~~~~------~ 208 (300)
T 2qc5_A 147 YPAFITLGSDNALWFTENQ-----NNSIGRITN-TG--KLEEYPLPTN----AAAPVGITSGNDGALWFVEIM------G 208 (300)
T ss_dssp CEEEEEECTTSSEEEEETT-----TTEEEEECT-TC--CEEEEECSST----TCCEEEEEECTTSSEEEEETT------T
T ss_pred CceeEEECCCCCEEEEecC-----CCeEEEECC-CC--cEEEeeCCCC----CCCcceEEECCCCCEEEEccC------C
Confidence 2334444444468886532 246999999 55 4544322111 111222333 36788886432 1
Q ss_pred cceEEeecCCCCeEEEEECCCCCCCCcceeeEEEe-CCEEEEEcCcCCCCCccccCCcEEEEECCCCeEEEc
Q 002047 308 ASAYGLAKHRDGRWEWAIAPGVSPSPRYQHAAVFV-NARLHVSGGALGGGRMVEDSSSVAVLDTAAGVWCDT 378 (975)
Q Consensus 308 ~d~~~~~~~~~~~W~w~~~~g~~P~~R~~hs~v~~-~~~L~V~GG~~~~~~~~~~~~dv~~yD~~t~~W~~v 378 (975)
..++.++. ++.+.....+.. ...-.++++- ++.|||.... .+.|.+||+ +.+...+
T Consensus 209 ~~i~~~~~--~g~~~~~~~~~~---~~~~~~i~~d~~g~l~v~~~~---------~~~i~~~~~-~g~~~~~ 265 (300)
T 2qc5_A 209 NKIGRITT--TGEISEYDIPTP---NARPHAITAGKNSEIWFTEWG---------ANQIGRITN-DNTIQEY 265 (300)
T ss_dssp TEEEEECT--TCCEEEEECSST---TCCEEEEEECSTTCEEEEETT---------TTEEEEECT-TSCEEEE
T ss_pred CEEEEEcC--CCcEEEEECCCC---CCCceEEEECCCCCEEEeccC---------CCeEEEECC-CCcEEEE
Confidence 24666665 344544433211 1112233333 4678886421 345889998 4555543
No 206
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=67.23 E-value=1.2e+02 Score=31.31 Aligned_cols=125 Identities=14% Similarity=0.087 Sum_probs=57.7
Q ss_pred cEEEEECCCCcEEEecCCCCCCCCccceEEEEe-CCEEEEEeccCCCCCccccEEEEEcCCCCCcEEEEEecCCCCCCCc
Q 002047 151 DVHCYDVLTNKWSRITPFGEPPTPRAAHVATAV-GTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGPRY 229 (975)
Q Consensus 151 dv~~yD~~t~~W~~l~~~g~~P~pR~~hsa~~~-~~~iyv~GG~~~~~~~~~dv~~yD~~t~~~~W~~v~~~g~~P~~R~ 229 (975)
.+..++............ .. ......... .+..++.|+. ...+.+||+... ..... .......
T Consensus 109 ~i~~~~~~~~~~~~~~~~---~~-~~~~~~~~~~~~~~l~s~s~------d~~~~~~d~~~~---~~~~~---~~~~~~~ 172 (340)
T 4aow_A 109 TLRLWDLTTGTTTRRFVG---HT-KDVLSVAFSSDNRQIVSGSR------DKTIKLWNTLGV---CKYTV---QDESHSE 172 (340)
T ss_dssp EEEEEETTTTEEEEEEEC---CS-SCEEEEEECTTSSCEEEEET------TSCEEEECTTSC---EEEEE---CSSSCSS
T ss_pred cceEEeecccceeeeecC---CC-CceeEEEEeecCccceeecC------CCeEEEEEeCCC---ceEEE---EeccccC
Confidence 566777776665544332 11 111122222 3455566654 245778887654 22221 1111111
Q ss_pred ccEEEEe---CCcEEEEEcCCCCCCCCCcEEEEECCCCCcEEEEccCCCCCCCCcceeEEEEEeCCeEEEecCCCC
Q 002047 230 GHVMALV---GQRYLMAIGGNDGKRPLADVWALDTAAKPYEWRKLEPEGEGPPPCMYATASARSDGLLLLCGGRDA 302 (975)
Q Consensus 230 ~h~~~~~---~~~~lyV~GG~~g~~~~ndv~~yDl~s~~~~W~~v~~~~~~P~~r~~~~a~~~~~g~lyvfGG~~~ 302 (975)
....+.+ ....+++.|+.++ .+..||+.+. +....-.... ....+.+...++.+++.|+.++
T Consensus 173 ~v~~~~~~~~~~~~~~~s~~~d~-----~i~i~d~~~~--~~~~~~~~h~----~~v~~~~~s~~~~~l~s~s~Dg 237 (340)
T 4aow_A 173 WVSCVRFSPNSSNPIIVSCGWDK-----LVKVWNLANC--KLKTNHIGHT----GYLNTVTVSPDGSLCASGGKDG 237 (340)
T ss_dssp CEEEEEECSCSSSCEEEEEETTS-----CEEEEETTTT--EEEEEECCCS----SCEEEEEECTTSSEEEEEETTC
T ss_pred cccceEEccCCCCcEEEEEcCCC-----EEEEEECCCC--ceeeEecCCC----CcEEEEEECCCCCEEEEEeCCC
Confidence 1122222 2224666666554 5788999887 4333211111 1112223334677888887654
No 207
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=67.19 E-value=58 Score=39.38 Aligned_cols=98 Identities=11% Similarity=0.112 Sum_probs=52.7
Q ss_pred CEEEEEeccCCCCCccccEEEEEcCCCCCcEEEEEecCCCCCCCcccEEEEe-CC--cEEEEEcCCCCCCCCCcEEEEEC
Q 002047 185 TMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGPRYGHVMALV-GQ--RYLMAIGGNDGKRPLADVWALDT 261 (975)
Q Consensus 185 ~~iyv~GG~~~~~~~~~dv~~yD~~t~~~~W~~v~~~g~~P~~R~~h~~~~~-~~--~~lyV~GG~~g~~~~ndv~~yDl 261 (975)
+.+++.||. ...+.+||+.+.+ +..+.. +......-..+.+ .+ +.+++.|+.++ .+..||+
T Consensus 21 g~~latg~~------dg~I~vwd~~~~~--~~~~~~---l~~h~~~V~~l~~s~~~~~~~l~s~s~Dg-----~I~vwd~ 84 (753)
T 3jro_A 21 GKRLATCSS------DKTIKIFEVEGET--HKLIDT---LTGHEGPVWRVDWAHPKFGTILASCSYDG-----KVLIWKE 84 (753)
T ss_dssp SCCEEEEET------TTEEEEEEEETTE--EEEEEE---ECCCSSCEEEEEECCTTSCSEEEEEETTS-----CEEEEEE
T ss_pred CCeEEEEEC------CCcEEEEecCCCC--Ccccee---ccCCcCceEEEEecCCCCCCEEEEEeCCC-----eEEEEEC
Confidence 345566664 3468888887543 555542 2222222333333 22 35777777765 5888898
Q ss_pred CCCCcEEEEccCCCCCCCCcceeEEEEEeC--CeEEEecCCCC
Q 002047 262 AAKPYEWRKLEPEGEGPPPCMYATASARSD--GLLLLCGGRDA 302 (975)
Q Consensus 262 ~s~~~~W~~v~~~~~~P~~r~~~~a~~~~~--g~lyvfGG~~~ 302 (975)
.+. +|..+....... ..........+ +.++++|+.++
T Consensus 85 ~~~--~~~~~~~~~~h~--~~V~~v~~sp~~~~~~l~sgs~dg 123 (753)
T 3jro_A 85 ENG--RWSQIAVHAVHS--ASVNSVQWAPHEYGPLLLVASSDG 123 (753)
T ss_dssp ETT--EEEEEEEECCCS--SCEEEEEECCGGGCSEEEEEETTS
T ss_pred CCC--cccccccccCCC--CCeEEEEECCCCCCCEEEEEeCCC
Confidence 888 776664433211 11122222233 67777777654
No 208
>3c9f_A 5'-nucleotidase; 2',3'-cyclic phosphodiesterase, protein STR initiative, PSI-2, NEW YORK SGX research center for structu genomics, nysgxrc; 1.90A {Candida albicans} SCOP: d.114.1.1 d.159.1.2
Probab=67.08 E-value=2.6 Score=49.80 Aligned_cols=72 Identities=18% Similarity=0.205 Sum_probs=39.5
Q ss_pred cCCEEEEecCCCCHH-------------HHHHHHHHhCCCC-CCCCccceeEEEeccccCCCCC-------hHHHHHHHH
Q 002047 697 KAPIKIFGDLHGQFG-------------DLMRLFDEYGSPS-TAGDIAYIDYLFLGDYVDRGQH-------SLETITLLL 755 (975)
Q Consensus 697 ~~~i~vvGDiHG~~~-------------~L~~ll~~~g~~~-~~~~~~~~~~vfLGDyVDRG~~-------s~evl~ll~ 755 (975)
..+|+.++|+||.+. .+.++...+.-.. ..+ ...-+|..||+++..+. ...++.+|-
T Consensus 15 ~l~ILhtnD~Hg~~~~~~~~~~~~~~~Gg~a~l~~~i~~~~~~~~--~~~LlldaGD~~~Gs~~~~~~~~~g~~~~~~ln 92 (557)
T 3c9f_A 15 DINFVHTTDTHGWYSGHINQPLYHANWGDFISFTTHMRRIAHSRN--QDLLLIDSGDRHDGNGLSDITSPNGLKSTPIFI 92 (557)
T ss_dssp SEEEEEECCCTTCTTCCSSCGGGCCCHHHHHHHHHHHHHHHHHTT--CEEEEEECSCCCSSCHHHHSSSSTTTTTHHHHT
T ss_pred EEEEEEEcccccCccCcccccccccccchHHHHHHHHHHHHHhcC--CCEEEEecCCCCCCccchhhcccCCHHHHHHHH
Confidence 346899999999752 2444433221100 000 11135779999976432 223455555
Q ss_pred HhhhcCCCCEEEEecccccc
Q 002047 756 ALKVEYPNNVHLIRGNHEAA 775 (975)
Q Consensus 756 ~lk~~~P~~v~llrGNHE~~ 775 (975)
.|. --.+..||||.-
T Consensus 93 ~lg-----~Da~tlGNHEfD 107 (557)
T 3c9f_A 93 KQD-----YDLLTIGNHELY 107 (557)
T ss_dssp TSC-----CSEECCCGGGSS
T ss_pred hcC-----CCEEeecchhcc
Confidence 543 224567999984
No 209
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=66.84 E-value=99 Score=36.76 Aligned_cols=201 Identities=13% Similarity=0.079 Sum_probs=96.5
Q ss_pred CcEEEEECCCCcEEEecCCCCCCCCccceEEEEeCCEEEEEeccCCCC-------CccccEEEEEcCCCCCcEEEEEecC
Q 002047 150 ADVHCYDVLTNKWSRITPFGEPPTPRAAHVATAVGTMVVIQGGIGPAG-------LSAEDLHVLDLTQQRPRWHRVVVQG 222 (975)
Q Consensus 150 ~dv~~yD~~t~~W~~l~~~g~~P~pR~~hsa~~~~~~iyv~GG~~~~~-------~~~~dv~~yD~~t~~~~W~~v~~~g 222 (975)
..++++|+.+++....... +.......+..-+++.++++.....+ ....++|++++.+...+-..+.
T Consensus 147 ~~i~v~dl~tg~~~~~~~~---~~~~~~~~~wspDg~~l~~~~~d~~~~~~~~~~~~~~~v~~~~l~t~~~~~~lv~--- 220 (695)
T 2bkl_A 147 AVLHVIDVDSGEWSKVDVI---EGGKYATPKWTPDSKGFYYEWLPTDPSIKVDERPGYTTIRYHTLGTEPSKDTVVH--- 220 (695)
T ss_dssp CEEEEEETTTCCBCSSCCB---SCCTTCCCEECTTSSEEEEEECCCCTTSCGGGGGGGCEEEEEETTSCGGGCEEEE---
T ss_pred EEEEEEECCCCCCcCCccc---CcccccceEEecCCCEEEEEEecCCCCCccccCCCCCEEEEEECCCCchhceEEE---
Confidence 4899999999876311111 11111222222245555555442211 1245699999987531222332
Q ss_pred CCCC-CCcccEEEEeCCcEEEEEcCCCCCCCCCcEEEEECCCCCcEEEEccCCCCCCCCcceeEEEEEeCCeEEEecCCC
Q 002047 223 PGPG-PRYGHVMALVGQRYLMAIGGNDGKRPLADVWALDTAAKPYEWRKLEPEGEGPPPCMYATASARSDGLLLLCGGRD 301 (975)
Q Consensus 223 ~~P~-~R~~h~~~~~~~~~lyV~GG~~g~~~~ndv~~yDl~s~~~~W~~v~~~~~~P~~r~~~~a~~~~~g~lyvfGG~~ 301 (975)
..+. +........-.+++.++++..++. ..+++|.+|..+. .|..+..... .... . +..++.+|+....+
T Consensus 221 ~~~~~~~~~~~~~~SpDG~~l~~~~~~~~-~~~~l~~~~~~~~--~~~~l~~~~~----~~~~-~-~~~~g~l~~~s~~~ 291 (695)
T 2bkl_A 221 ERTGDPTTFLQSDLSRDGKYLFVYILRGW-SENDVYWKRPGEK--DFRLLVKGVG----AKYE-V-HAWKDRFYVLTDEG 291 (695)
T ss_dssp CCCCCTTCEEEEEECTTSCCEEEEEEETT-TEEEEEEECTTCS--SCEEEEECSS----CCEE-E-EEETTEEEEEECTT
T ss_pred ecCCCCEEEEEEEECCCCCEEEEEEeCCC-CceEEEEEcCCCC--ceEEeecCCC----ceEE-E-EecCCcEEEEECCC
Confidence 1121 122223333333333444333221 3468899988776 6777754322 1111 1 22455566664432
Q ss_pred CCCCCccceEEeecCCCC--eEEEEECCCCCCCCcceeeEEEeCCEEEEEcCcCCCCCccccCCcEEEEECCCCeEEEc
Q 002047 302 ASSVPLASAYGLAKHRDG--RWEWAIAPGVSPSPRYQHAAVFVNARLHVSGGALGGGRMVEDSSSVAVLDTAAGVWCDT 378 (975)
Q Consensus 302 ~~~~~l~d~~~~~~~~~~--~W~w~~~~g~~P~~R~~hs~v~~~~~L~V~GG~~~~~~~~~~~~dv~~yD~~t~~W~~v 378 (975)
. ....++.++..... .|+.+.... + ...-.+....+++|++....++ ...+|++|+....-..+
T Consensus 292 ~---~~~~l~~~d~~~~~~~~~~~l~~~~--~-~~~l~~~~~~~~~lv~~~~~dg-------~~~l~~~~~~g~~~~~l 357 (695)
T 2bkl_A 292 A---PRQRVFEVDPAKPARASWKEIVPED--S-SASLLSVSIVGGHLSLEYLKDA-------TSEVRVATLKGKPVRTV 357 (695)
T ss_dssp C---TTCEEEEEBTTBCSGGGCEEEECCC--S-SCEEEEEEEETTEEEEEEEETT-------EEEEEEEETTCCEEEEC
T ss_pred C---CCCEEEEEeCCCCCccCCeEEecCC--C-CCeEEEEEEECCEEEEEEEECC-------EEEEEEEeCCCCeeEEe
Confidence 1 23456666543332 255433221 1 1112234445888888765443 34589999865544333
No 210
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=65.36 E-value=84 Score=37.78 Aligned_cols=203 Identities=14% Similarity=0.067 Sum_probs=96.6
Q ss_pred CcEEEEECCCCcEEEecCCCCCCCCccceEEEEeCCEEEEEeccCCC--------CCccccEEEEEcCCCCCcEEEEEec
Q 002047 150 ADVHCYDVLTNKWSRITPFGEPPTPRAAHVATAVGTMVVIQGGIGPA--------GLSAEDLHVLDLTQQRPRWHRVVVQ 221 (975)
Q Consensus 150 ~dv~~yD~~t~~W~~l~~~g~~P~pR~~hsa~~~~~~iyv~GG~~~~--------~~~~~dv~~yD~~t~~~~W~~v~~~ 221 (975)
..++++|+.++++...... ..+....+..-+ +-++++..... ......+|++++.+...+-..+. .
T Consensus 189 ~~i~v~dl~tg~~~~~~~~----~~~~~~~~wspD-~~l~~~~~~~~~~~~~~~~~~~~~~v~~~~lgt~~~~~~lv~-~ 262 (741)
T 1yr2_A 189 RTVKFVGVADGKPLADELK----WVKFSGLAWLGN-DALLYSRFAEPKEGQAFQALNYNQTVWLHRLGTPQSADQPVF-A 262 (741)
T ss_dssp EEEEEEETTTCCEEEEEEE----EEESCCCEESTT-SEEEEEECCCC--------CCCCCEEEEEETTSCGGGCEEEE-C
T ss_pred EEEEEEECCCCCCCCccCC----CceeccEEEECC-CEEEEEEecCcccccccccCCCCCEEEEEECCCCchhCEEEe-c
Confidence 3699999999987654211 111111111123 33333332211 11245689999876521112222 1
Q ss_pred CCCCCCCcccEEEEeCCcEEEEEcCCCCCCCCCcEEEEECCCCCcE-EEEccCCCCCCCCcceeEEEEEeCCeEEEecCC
Q 002047 222 GPGPGPRYGHVMALVGQRYLMAIGGNDGKRPLADVWALDTAAKPYE-WRKLEPEGEGPPPCMYATASARSDGLLLLCGGR 300 (975)
Q Consensus 222 g~~P~~R~~h~~~~~~~~~lyV~GG~~g~~~~ndv~~yDl~s~~~~-W~~v~~~~~~P~~r~~~~a~~~~~g~lyvfGG~ 300 (975)
....+........-.+++.+++...++....+++|.+|+.+..-. |..+..... .... .+...++.||+....
T Consensus 263 -~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~----~~~~-~~~~dg~~l~~~s~~ 336 (741)
T 1yr2_A 263 -TPELPKRGHGASVSSDGRWVVITSSEGTDPVNTVHVARVTNGKIGPVTALIPDLK----AQWD-FVDGVGDQLWFVSGD 336 (741)
T ss_dssp -CTTCTTCEEEEEECTTSCEEEEEEECTTCSCCEEEEEEEETTEECCCEEEECSSS----SCEE-EEEEETTEEEEEECT
T ss_pred -cCCCCeEEEEEEECCCCCEEEEEEEccCCCcceEEEEECCCCCCcccEEecCCCC----ceEE-EEeccCCEEEEEECC
Confidence 111222222333333333333333333223578999999764213 666654322 1222 223456777776543
Q ss_pred CCCCCCccceEEeecCCC-CeEEEEECCCCCCCCcceeeEEEeCCEEEEEcCcCCCCCccccCCcEEEEECCCCeEEEc
Q 002047 301 DASSVPLASAYGLAKHRD-GRWEWAIAPGVSPSPRYQHAAVFVNARLHVSGGALGGGRMVEDSSSVAVLDTAAGVWCDT 378 (975)
Q Consensus 301 ~~~~~~l~d~~~~~~~~~-~~W~w~~~~g~~P~~R~~hs~v~~~~~L~V~GG~~~~~~~~~~~~dv~~yD~~t~~W~~v 378 (975)
+. ....++.++.... ..|+-+.. .... .-......+++|++....++ ...+|++|+....-..+
T Consensus 337 ~~---~~~~l~~~d~~~~~~~~~~l~~--~~~~--~l~~~~~~~~~lv~~~~~dg-------~~~l~~~~~~g~~~~~l 401 (741)
T 1yr2_A 337 GA---PLKKIVRVDLSGSTPRFDTVVP--ESKD--NLESVGIAGNRLFASYIHDA-------KSQVLAFDLDGKPAGAV 401 (741)
T ss_dssp TC---TTCEEEEEECSSSSCEEEEEEC--CCSS--EEEEEEEEBTEEEEEEEETT-------EEEEEEEETTSCEEEEC
T ss_pred CC---CCCEEEEEeCCCCccccEEEec--CCCC--eEEEEEEECCEEEEEEEECC-------EEEEEEEeCCCCceeec
Confidence 22 2345666665432 35553332 1111 12233445788887765433 34589999865544333
No 211
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=64.89 E-value=1.4e+02 Score=38.04 Aligned_cols=94 Identities=16% Similarity=0.155 Sum_probs=47.1
Q ss_pred CcEEEEECCCCcEEEecCCCCCCCCccceEEEEeC--C-EEEEEeccCCCCCccccEEEEEcCCCCCcEEEEEecCCCCC
Q 002047 150 ADVHCYDVLTNKWSRITPFGEPPTPRAAHVATAVG--T-MVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPG 226 (975)
Q Consensus 150 ~dv~~yD~~t~~W~~l~~~g~~P~pR~~hsa~~~~--~-~iyv~GG~~~~~~~~~dv~~yD~~t~~~~W~~v~~~g~~P~ 226 (975)
..+.+||+.+.+....-.. .. ..-.+++... + .+++.|+. ...+.+||+.+.. -.... .+ .
T Consensus 679 ~~v~vwd~~~~~~~~~~~~---~~-~~v~~~~~~~~~~~~~l~sg~~------d~~v~vwd~~~~~--~~~~~-~~---h 742 (1249)
T 3sfz_A 679 KKVKIWDSATGKLVHTYDE---HS-EQVNCCHFTNKSNHLLLATGSN------DFFLKLWDLNQKE--CRNTM-FG---H 742 (1249)
T ss_dssp SEEEEEETTTCCEEEEEEC---CS-SCEEEEEECSSSSCCEEEEEET------TSCEEEEETTSSS--EEEEE-CC---C
T ss_pred CeEEEEECCCCceEEEEcC---CC-CcEEEEEEecCCCceEEEEEeC------CCeEEEEECCCcc--hhhee-cC---C
Confidence 3688899888764433211 11 1111222222 3 45556654 3468999998763 22111 11 1
Q ss_pred CCcccEEEEeCCcEEEEEcCCCCCCCCCcEEEEECCCC
Q 002047 227 PRYGHVMALVGQRYLMAIGGNDGKRPLADVWALDTAAK 264 (975)
Q Consensus 227 ~R~~h~~~~~~~~~lyV~GG~~g~~~~ndv~~yDl~s~ 264 (975)
...-.+++...++.+++.|+.++ .+..||+.+.
T Consensus 743 ~~~v~~~~~sp~~~~l~s~s~dg-----~v~vwd~~~~ 775 (1249)
T 3sfz_A 743 TNSVNHCRFSPDDELLASCSADG-----TLRLWDVRSA 775 (1249)
T ss_dssp SSCEEEEEECSSTTEEEEEESSS-----EEEEEEGGGT
T ss_pred CCCEEEEEEecCCCEEEEEECCC-----eEEEEeCCCC
Confidence 11112223333335677776654 5788888766
No 212
>3jyf_A 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'- nucleotidase bifunctional periplasmic...; APC63187.2; HET: EPE TAM; 2.43A {Klebsiella pneumoniae subsp}
Probab=64.84 E-value=4.2 Score=44.76 Aligned_cols=68 Identities=18% Similarity=0.086 Sum_probs=38.5
Q ss_pred cCCEEEEecCCCCHH----------------HHHHHHHHhCCCCCCCCccceeEEEeccccCCCCChH------------
Q 002047 697 KAPIKIFGDLHGQFG----------------DLMRLFDEYGSPSTAGDIAYIDYLFLGDYVDRGQHSL------------ 748 (975)
Q Consensus 697 ~~~i~vvGDiHG~~~----------------~L~~ll~~~g~~~~~~~~~~~~~vfLGDyVDRG~~s~------------ 748 (975)
+-.|+-+.|+||++. .+..+++.+.-.... .-+|..||.+..-+.+-
T Consensus 8 ~l~Il~tnD~Hg~~~~~~~~~~~~~~~gG~ar~at~i~~~r~~~~n-----~llld~GD~~qGs~~~~~~~~~~~~~g~~ 82 (339)
T 3jyf_A 8 DLRIMETTDLHSNMMDFDYYKDAATEKFGLVRTASLIEQARAEVKN-----SVLVDNGDVIQGSPLGDYMAAKGLKEGDV 82 (339)
T ss_dssp EEEEEEECCCTTCCSSEETTTTEECSSCCHHHHHHHHHHHHHTCSC-----EEEEECSCCSSSSHHHHHHHHHCCCTTCC
T ss_pred eEEEEEEeeCCCCcccccccCCCccccCCHHHHHHHHHHHHhhCCC-----EEEEECCCCCCCchhHHhhhhcccccccc
Confidence 346888999999874 344455554321111 24566999997443221
Q ss_pred -HHHHHHHHhhhcCCCCEEEEeccccc
Q 002047 749 -ETITLLLALKVEYPNNVHLIRGNHEA 774 (975)
Q Consensus 749 -evl~ll~~lk~~~P~~v~llrGNHE~ 774 (975)
.++.+|-.|. -. .+..||||.
T Consensus 83 ~p~~~~mn~lg----~D-~~t~GNHEf 104 (339)
T 3jyf_A 83 HPVYKAMNTLN----YA-VGNLGNHEF 104 (339)
T ss_dssp CHHHHHHTTSC----CS-EEECCGGGG
T ss_pred hHHHHHHHhcC----CC-EEecchhhh
Confidence 2344444442 12 345699996
No 213
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=64.79 E-value=85 Score=32.74 Aligned_cols=65 Identities=9% Similarity=0.100 Sum_probs=33.8
Q ss_pred EEEEEeccCCCCCccccEEEEEcCCCCCcEEEEEecCCCCCCCcccEEEEe-CC---cEEEEEcCCCCCCCCCcEEEEEC
Q 002047 186 MVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGPRYGHVMALV-GQ---RYLMAIGGNDGKRPLADVWALDT 261 (975)
Q Consensus 186 ~iyv~GG~~~~~~~~~dv~~yD~~t~~~~W~~v~~~g~~P~~R~~h~~~~~-~~---~~lyV~GG~~g~~~~ndv~~yDl 261 (975)
.+++.|+... ....+.+||+.+.. .......+ .. ..-.++.+ .+ +.+++.|+.++ .+..||+
T Consensus 32 ~l~~~~s~~~---~d~~v~iw~~~~~~--~~~~~~~~---~~-~~v~~~~~~~~~~~~~~l~~~~~dg-----~i~iwd~ 97 (357)
T 3i2n_A 32 KFVTMGNFAR---GTGVIQLYEIQHGD--LKLLREIE---KA-KPIKCGTFGATSLQQRYLATGDFGG-----NLHIWNL 97 (357)
T ss_dssp EEEEEEC--C---CCEEEEEEEECSSS--EEEEEEEE---ES-SCEEEEECTTCCTTTCCEEEEETTS-----CEEEECT
T ss_pred eEEEecCccC---CCcEEEEEeCCCCc--ccceeeec---cc-CcEEEEEEcCCCCCCceEEEecCCC-----eEEEEeC
Confidence 6666765411 13578899988764 43332111 11 11122233 22 25667776654 5888888
Q ss_pred CCC
Q 002047 262 AAK 264 (975)
Q Consensus 262 ~s~ 264 (975)
.+.
T Consensus 98 ~~~ 100 (357)
T 3i2n_A 98 EAP 100 (357)
T ss_dssp TSC
T ss_pred CCC
Confidence 766
No 214
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=64.15 E-value=1.2e+02 Score=31.67 Aligned_cols=69 Identities=12% Similarity=0.224 Sum_probs=35.9
Q ss_pred CEEEEEeccCCCCCccccEEEEEcCCCCCcEEEEEecCCCCCCCcccEEEEe-CC--cEEEEEcCCCCCCCCCcEEEEEC
Q 002047 185 TMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGPRYGHVMALV-GQ--RYLMAIGGNDGKRPLADVWALDT 261 (975)
Q Consensus 185 ~~iyv~GG~~~~~~~~~dv~~yD~~t~~~~W~~v~~~g~~P~~R~~h~~~~~-~~--~~lyV~GG~~g~~~~ndv~~yDl 261 (975)
+.+++.|+. ...+.+||+.+.. |..+... ......-..+.+ .+ +.+++.|+.++ .+..||+
T Consensus 71 ~~~l~s~s~------D~~v~iWd~~~~~--~~~~~~~---~~h~~~V~~v~~~p~~~g~~lasgs~D~-----~i~lwd~ 134 (316)
T 3bg1_A 71 GNILASCSY------DRKVIIWREENGT--WEKSHEH---AGHDSSVNSVCWAPHDYGLILACGSSDG-----AISLLTY 134 (316)
T ss_dssp SSCEEEEET------TSCEEEECCSSSC--CCEEEEE---CCCSSCCCEEEECCTTTCSCEEEECSSS-----CEEEEEE
T ss_pred CCEEEEEEC------CCEEEEEECCCCc--ceEEEEc---cCCCCceEEEEECCCCCCcEEEEEcCCC-----CEEEEec
Confidence 456666664 3568899988753 5444321 111111222223 22 35777777765 4666776
Q ss_pred CCCCcEEEE
Q 002047 262 AAKPYEWRK 270 (975)
Q Consensus 262 ~s~~~~W~~ 270 (975)
.+.. .|..
T Consensus 135 ~~~~-~~~~ 142 (316)
T 3bg1_A 135 TGEG-QWEV 142 (316)
T ss_dssp CSSS-CEEE
T ss_pred CCCC-Ccce
Confidence 6531 4644
No 215
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=64.04 E-value=47 Score=35.66 Aligned_cols=112 Identities=15% Similarity=0.082 Sum_probs=56.4
Q ss_pred cCcEEEEECCCCcEEEecCCCCCCCCccceEEEEe-CCEEEEEeccCCCCCccccEEEEEcCCCCCcEEEEEecCCCCCC
Q 002047 149 TADVHCYDVLTNKWSRITPFGEPPTPRAAHVATAV-GTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGP 227 (975)
Q Consensus 149 ~~dv~~yD~~t~~W~~l~~~g~~P~pR~~hsa~~~-~~~iyv~GG~~~~~~~~~dv~~yD~~t~~~~W~~v~~~g~~P~~ 227 (975)
...++.+|+.+.+-+.+... ..+..+....- +++.+++............+|++|+.... ...+. .....
T Consensus 167 ~~~l~~~d~~~g~~~~l~~~----~~~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~--~~~l~---~~~~~ 237 (388)
T 3pe7_A 167 CCRLMRVDLKTGESTVILQE----NQWLGHPIYRPYDDSTVAFCHEGPHDLVDARMWLINEDGTN--MRKVK---THAEG 237 (388)
T ss_dssp CEEEEEEETTTCCEEEEEEE----SSCEEEEEEETTEEEEEEEEECSCTTTSSCSEEEEETTSCC--CEESC---CCCTT
T ss_pred cceEEEEECCCCceEEeecC----CccccccEECCCCCCEEEEEEecCCCCCcceEEEEeCCCCc--eEEee---eCCCC
Confidence 36899999999887776532 12233333333 44444443332222235689999987653 44443 11111
Q ss_pred CcccEEEEe-CCcEEEEEcCCCCCCCCCcEEEEECCCCCcEEEEcc
Q 002047 228 RYGHVMALV-GQRYLMAIGGNDGKRPLADVWALDTAAKPYEWRKLE 272 (975)
Q Consensus 228 R~~h~~~~~-~~~~lyV~GG~~g~~~~ndv~~yDl~s~~~~W~~v~ 272 (975)
..-.....- +++.|+......+ .....++++|+.+. +-+.+.
T Consensus 238 ~~~~~~~~spdg~~l~~~~~~~~-~~~~~l~~~d~~~g--~~~~l~ 280 (388)
T 3pe7_A 238 ESCTHEFWVPDGSALVYVSYLKG-SPDRFIYSADPETL--ENRQLT 280 (388)
T ss_dssp EEEEEEEECTTSSCEEEEEEETT-CCCEEEEEECTTTC--CEEEEE
T ss_pred cccccceECCCCCEEEEEecCCC-CCcceEEEEecCCC--ceEEEE
Confidence 111112222 3334544432222 11235999999988 555543
No 216
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=64.03 E-value=81 Score=33.61 Aligned_cols=100 Identities=7% Similarity=0.046 Sum_probs=47.7
Q ss_pred CcEEEEECCCCcEEEecCCCCCCCCccceEEEEeC--CEEEEEeccCCCCCccccEEEEEcCCCCCcEEEEEecC-----
Q 002047 150 ADVHCYDVLTNKWSRITPFGEPPTPRAAHVATAVG--TMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQG----- 222 (975)
Q Consensus 150 ~dv~~yD~~t~~W~~l~~~g~~P~pR~~hsa~~~~--~~iyv~GG~~~~~~~~~dv~~yD~~t~~~~W~~v~~~g----- 222 (975)
..+..||+.+..-...-.. ....-.+++... ..+++.|+. ...+.+||+.+.......+....
T Consensus 166 ~~v~~~d~~~~~~~~~~~~----~~~~v~~~~~~~~~~~ll~~~~~------dg~i~i~d~~~~~~~~~~~~~~~~~~~~ 235 (408)
T 4a11_B 166 PKVQLCDLKSGSCSHILQG----HRQEILAVSWSPRYDYILATASA------DSRVKLWDVRRASGCLITLDQHNGKKSQ 235 (408)
T ss_dssp SSEEEEESSSSCCCEEECC----CCSCEEEEEECSSCTTEEEEEET------TSCEEEEETTCSSCCSEECCTTTTCSCC
T ss_pred CeEEEEeCCCcceeeeecC----CCCcEEEEEECCCCCcEEEEEcC------CCcEEEEECCCCCcccccccccccccce
Confidence 4688889876542221111 111112222222 246777774 34688999876532223221000
Q ss_pred CC----CCCCcc-cEEEEeCCcEEEEEcCCCCCCCCCcEEEEECCCC
Q 002047 223 PG----PGPRYG-HVMALVGQRYLMAIGGNDGKRPLADVWALDTAAK 264 (975)
Q Consensus 223 ~~----P~~R~~-h~~~~~~~~~lyV~GG~~g~~~~ndv~~yDl~s~ 264 (975)
.. ...... .+++...++..++.|+.++ .+..||+.+.
T Consensus 236 ~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg-----~i~vwd~~~~ 277 (408)
T 4a11_B 236 AVESANTAHNGKVNGLCFTSDGLHLLTVGTDN-----RMRLWNSSNG 277 (408)
T ss_dssp CTTTSSCSCSSCEEEEEECTTSSEEEEEETTS-----CEEEEETTTC
T ss_pred eeccccccccCceeEEEEcCCCCEEEEecCCC-----eEEEEECCCC
Confidence 00 111111 2223333435666676654 5889998876
No 217
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=63.70 E-value=59 Score=37.69 Aligned_cols=100 Identities=13% Similarity=0.062 Sum_probs=51.8
Q ss_pred cCcEEEEECCCCcEEEecCCCCCCCCccceEEEEe-CC-EEEEEeccCCCCCccccEEEEEcCCCCCcEEEEEecCCCCC
Q 002047 149 TADVHCYDVLTNKWSRITPFGEPPTPRAAHVATAV-GT-MVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPG 226 (975)
Q Consensus 149 ~~dv~~yD~~t~~W~~l~~~g~~P~pR~~hsa~~~-~~-~iyv~GG~~~~~~~~~dv~~yD~~t~~~~W~~v~~~g~~P~ 226 (975)
.+.++.+|..+..-..+... +..+.-|..+.. ++ ++|+.+.. .+.+.++|+.+.. -...-..+..|.
T Consensus 301 ~g~i~vvd~~~~~~l~~~~i---~~~~~~~~~~~spdg~~l~va~~~------~~~v~v~D~~tg~--l~~~i~~g~~ph 369 (543)
T 1nir_A 301 TGKVLLVNYKDIDNLTVTSI---GAAPFLHDGGWDSSHRYFMTAANN------SNKVAVIDSKDRR--LSALVDVGKTPH 369 (543)
T ss_dssp TTEEEEEECTTSSSCEEEEE---ECCSSCCCEEECTTSCEEEEEEGG------GTEEEEEETTTTE--EEEEEECSSSBC
T ss_pred CCeEEEEEecCCCcceeEEe---ccCcCccCceECCCCCEEEEEecC------CCeEEEEECCCCe--EEEeeccCCCCC
Confidence 45788888876431111111 122333444443 23 56555432 4678999998863 333333455555
Q ss_pred CCcccEEEEeCCcEEEEEcCCCCCCCCCcEEEEECCC
Q 002047 227 PRYGHVMALVGQRYLMAIGGNDGKRPLADVWALDTAA 263 (975)
Q Consensus 227 ~R~~h~~~~~~~~~lyV~GG~~g~~~~ndv~~yDl~s 263 (975)
+-.+.....-+++.+|+.+... -+.|-++|+.+
T Consensus 370 ~g~g~~~~~p~~g~~~~s~~~~----d~~V~v~d~~~ 402 (543)
T 1nir_A 370 PGRGANFVHPKYGPVWSTSHLG----DGSISLIGTDP 402 (543)
T ss_dssp CTTCEEEEETTTEEEEEEEBSS----SSEEEEEECCT
T ss_pred CCCCcccCCCCCccEEEeccCC----CceEEEEEeCC
Confidence 4333332212335788876432 14688888876
No 218
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=63.49 E-value=1.6e+02 Score=31.55 Aligned_cols=134 Identities=13% Similarity=0.140 Sum_probs=64.7
Q ss_pred CcEEEEECCCCcEEEecCCCCCCCCcc-ceEEEEe---CCEEEEEeccCCCCCccccEEEEEcCCCCCcEEEEEecCCCC
Q 002047 150 ADVHCYDVLTNKWSRITPFGEPPTPRA-AHVATAV---GTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGP 225 (975)
Q Consensus 150 ~dv~~yD~~t~~W~~l~~~g~~P~pR~-~hsa~~~---~~~iyv~GG~~~~~~~~~dv~~yD~~t~~~~W~~v~~~g~~P 225 (975)
..+..||+.+..-...-... .+.... .-....+ ++.+++.|+. ...+.+||+.........+. +
T Consensus 180 ~~i~~wd~~~~~~~~~~~~~-~~~~h~~~v~~~~~~~~~~~~l~sgs~------D~~v~~wd~~~~~~~~~~~~--~--- 247 (380)
T 3iz6_a 180 QTCVLWDVTTGQRISIFGSE-FPSGHTADVLSLSINSLNANMFISGSC------DTTVRLWDLRITSRAVRTYH--G--- 247 (380)
T ss_dssp SCEEEECTTTCCEEEEECCC-SSSSCCSCEEEEEECSSSCCEEEEEET------TSCEEEEETTTTCCCCEEEC--C---
T ss_pred CcEEEEEcCCCcEEEEeecc-cCCCCccCeEEEEeecCCCCEEEEEEC------CCeEEEEECCCCCcceEEEC--C---
Confidence 46788898887654432110 011111 1111222 4577788875 35688999874321122221 1
Q ss_pred CCCcccEEEEeCCcEEEEEcCCCCCCCCCcEEEEECCCCCcEEEEccCCC-CC--CCCcceeEEEEEeCCeEEEecCCCC
Q 002047 226 GPRYGHVMALVGQRYLMAIGGNDGKRPLADVWALDTAAKPYEWRKLEPEG-EG--PPPCMYATASARSDGLLLLCGGRDA 302 (975)
Q Consensus 226 ~~R~~h~~~~~~~~~lyV~GG~~g~~~~ndv~~yDl~s~~~~W~~v~~~~-~~--P~~r~~~~a~~~~~g~lyvfGG~~~ 302 (975)
..-.-.+++...++..++.|+.++ .+..||+.+. +-...-... .. .........+...++.+++.|+.++
T Consensus 248 h~~~v~~v~~~p~~~~l~s~s~D~-----~i~lwd~~~~--~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~g~~dg 320 (380)
T 3iz6_a 248 HEGDINSVKFFPDGQRFGTGSDDG-----TCRLFDMRTG--HQLQVYNREPDRNDNELPIVTSVAFSISGRLLFAGYSNG 320 (380)
T ss_dssp CSSCCCEEEECTTSSEEEEECSSS-----CEEEEETTTT--EEEEEECCCCSSSCCSSCSCSEEEECSSSSEEEEECTTS
T ss_pred cCCCeEEEEEecCCCeEEEEcCCC-----eEEEEECCCC--cEEEEecccccccccccCceEEEEECCCCCEEEEEECCC
Confidence 011112333344446777887765 5888999876 433221111 00 0001122333445677777777543
No 219
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=62.96 E-value=1.6e+02 Score=31.14 Aligned_cols=100 Identities=13% Similarity=0.175 Sum_probs=46.3
Q ss_pred cEEEEECCCCcEEEecCCCCCCCCccceEEEEeCCEEEEEeccCCCCCccccEEEEEcCCCCCcE----EEEEecCCCCC
Q 002047 151 DVHCYDVLTNKWSRITPFGEPPTPRAAHVATAVGTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRW----HRVVVQGPGPG 226 (975)
Q Consensus 151 dv~~yD~~t~~W~~l~~~g~~P~pR~~hsa~~~~~~iyv~GG~~~~~~~~~dv~~yD~~t~~~~W----~~v~~~g~~P~ 226 (975)
.+|.+|..+...+.+.... .....-...+..++.||+.+.. ...+.+|++.... .. ......+..|.
T Consensus 78 ~~~~~~~~~g~~~~~~~~~--~~~~~p~~~~~dg~~l~~~~~~------~~~v~~~~~~~~g-~~~~~~~~~~~~g~~~~ 148 (361)
T 3scy_A 78 SAFAFDKEKGTLHLLNTQK--TMGADPCYLTTNGKNIVTANYS------GGSITVFPIGQDG-ALLPASDVIEFKGSGPD 148 (361)
T ss_dssp EEEEEETTTTEEEEEEEEE--CSSSCEEEEEECSSEEEEEETT------TTEEEEEEBCTTS-CBCSCSEEEECCCCCSC
T ss_pred EEEEEeCCCCcEEEeeEec--cCCCCcEEEEECCCEEEEEECC------CCEEEEEEeCCCC-cCcccceeEEccCCCCC
Confidence 3455666667777664331 0111222233334466665432 2568889886532 11 11121222221
Q ss_pred C-----CcccEEEEeCCc-EEEEEcCCCCCCCCCcEEEEECCCC
Q 002047 227 P-----RYGHVMALVGQR-YLMAIGGNDGKRPLADVWALDTAAK 264 (975)
Q Consensus 227 ~-----R~~h~~~~~~~~-~lyV~GG~~g~~~~ndv~~yDl~s~ 264 (975)
+ ..-|.+++-.++ +||+.+..+ +.+++|++...
T Consensus 149 ~~~~~~~~~~~~~~spdg~~l~~~~~~~-----~~v~v~~~~~~ 187 (361)
T 3scy_A 149 KERQTMPHLHCVRITPDGKYLLADDLGT-----DQIHKFNINPN 187 (361)
T ss_dssp TTTCSSCCEEEEEECTTSSEEEEEETTT-----TEEEEEEECTT
T ss_pred ccccCCCcceEEEECCCCCEEEEEeCCC-----CEEEEEEEcCC
Confidence 1 112444444333 577765322 46777776654
No 220
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=62.27 E-value=1.6e+02 Score=33.48 Aligned_cols=150 Identities=9% Similarity=-0.056 Sum_probs=70.8
Q ss_pred EEEEeccCCCCCccccEEEEEcCCCCCcEEEEEecCCCCCCC-cccEEEEeCC-cEEEEEcCCCCCCCCCcEEEEECCCC
Q 002047 187 VVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGPR-YGHVMALVGQ-RYLMAIGGNDGKRPLADVWALDTAAK 264 (975)
Q Consensus 187 iyv~GG~~~~~~~~~dv~~yD~~t~~~~W~~v~~~g~~P~~R-~~h~~~~~~~-~~lyV~GG~~g~~~~ndv~~yDl~s~ 264 (975)
+++.|+. ...+.+||+.+. ..+.......... .-.+++...+ +.+++.|+.++ .+.+||+.+.
T Consensus 175 ~l~~~~~------d~~v~vwd~~~~----~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg-----~i~vwd~~~~ 239 (615)
T 1pgu_A 175 RSMTVGD------DGSVVFYQGPPF----KFSASDRTHHKQGSFVRDVEFSPDSGEFVITVGSDR-----KISCFDGKSG 239 (615)
T ss_dssp EEEEEET------TTEEEEEETTTB----EEEEEECSSSCTTCCEEEEEECSTTCCEEEEEETTC-----CEEEEETTTC
T ss_pred EEEEEeC------CCcEEEEeCCCc----ceeeeecccCCCCceEEEEEECCCCCCEEEEEeCCC-----eEEEEECCCC
Confidence 6666664 357889998764 2332111111100 1223333333 45777777654 6889999877
Q ss_pred CcEEEEcc-C---CCCCCCCcceeEEEEEeCCeEEEecCCCCCCCCccceEEeecCCCCeEEEEECCCCCCCCcceeeEE
Q 002047 265 PYEWRKLE-P---EGEGPPPCMYATASARSDGLLLLCGGRDASSVPLASAYGLAKHRDGRWEWAIAPGVSPSPRYQHAAV 340 (975)
Q Consensus 265 ~~~W~~v~-~---~~~~P~~r~~~~a~~~~~g~lyvfGG~~~~~~~l~d~~~~~~~~~~~W~w~~~~g~~P~~R~~hs~v 340 (975)
+....- . ... ..-.++...++.+++.|+.++ .+..++.... ...........+......++.
T Consensus 240 --~~~~~~~~~~~~~~-----~~v~~~~~~~~~~l~~~~~d~------~i~~wd~~~~-~~~~~~~~~~~~~~~~~~~~~ 305 (615)
T 1pgu_A 240 --EFLKYIEDDQEPVQ-----GGIFALSWLDSQKFATVGADA------TIRVWDVTTS-KCVQKWTLDKQQLGNQQVGVV 305 (615)
T ss_dssp --CEEEECCBTTBCCC-----SCEEEEEESSSSEEEEEETTS------EEEEEETTTT-EEEEEEECCTTCGGGCEEEEE
T ss_pred --CEeEEecccccccC-----CceEEEEEcCCCEEEEEcCCC------cEEEEECCCC-cEEEEEcCCCCcccCceeEEE
Confidence 433222 1 111 111222222777777777543 2333433322 222221111111122223333
Q ss_pred EeCCEEEEEcCcCCCCCccccCCcEEEEECCCCe
Q 002047 341 FVNARLHVSGGALGGGRMVEDSSSVAVLDTAAGV 374 (975)
Q Consensus 341 ~~~~~L~V~GG~~~~~~~~~~~~dv~~yD~~t~~ 374 (975)
..++..++.|+.+ ..+.+||+.+.+
T Consensus 306 ~~~~~~l~~~~~~---------g~i~~~d~~~~~ 330 (615)
T 1pgu_A 306 ATGNGRIISLSLD---------GTLNFYELGHDE 330 (615)
T ss_dssp EEETTEEEEEETT---------SCEEEEETTEEE
T ss_pred eCCCCeEEEEECC---------CCEEEEECCCCc
Confidence 3366666777653 348899988743
No 221
>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}
Probab=62.22 E-value=1.6e+02 Score=31.15 Aligned_cols=176 Identities=10% Similarity=0.065 Sum_probs=83.5
Q ss_pred CCCcEEEecCCCCCCCCccceEEEEe-CCEEEEEeccCCCCCccccEEEEEcCCCCCcEEEEEecCCCCCCCcccEEEEe
Q 002047 158 LTNKWSRITPFGEPPTPRAAHVATAV-GTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGPRYGHVMALV 236 (975)
Q Consensus 158 ~t~~W~~l~~~g~~P~pR~~hsa~~~-~~~iyv~GG~~~~~~~~~dv~~yD~~t~~~~W~~v~~~g~~P~~R~~h~~~~~ 236 (975)
...+|+.+.. |....-.++... .+.+|++|-. ..+++- .... ..|+.+.... +.+......+.+
T Consensus 23 ~g~~W~~~~~----~~~~~~~~v~~~~~~~~~~~G~~-------g~i~~s-~DgG-~tW~~~~~~~--~~~~~~~~~i~~ 87 (327)
T 2xbg_A 23 DYNPWEAIQL----PTTATILDMSFIDRHHGWLVGVN-------ATLMET-RDGG-QTWEPRTLVL--DHSDYRFNSVSF 87 (327)
T ss_dssp SSCCEEEEEC----SCSSCEEEEEESSSSCEEEEETT-------TEEEEE-SSTT-SSCEECCCCC--SCCCCEEEEEEE
T ss_pred CCCCceEeec----CCCCcEEEEEECCCCcEEEEcCC-------CeEEEe-CCCC-CCCeECCCCC--CCCCccEEEEEe
Confidence 3467998863 222333344433 3477776532 124332 2221 2499875221 112222222233
Q ss_pred CCcEEEEEcCCCCCCCCCcEEEEECCCCCcEEEEccCCCCCCCCcceeEEEEEeCCeEEEecCCCCCCCCccceEEeecC
Q 002047 237 GQRYLMAIGGNDGKRPLADVWALDTAAKPYEWRKLEPEGEGPPPCMYATASARSDGLLLLCGGRDASSVPLASAYGLAKH 316 (975)
Q Consensus 237 ~~~~lyV~GG~~g~~~~ndv~~yDl~s~~~~W~~v~~~~~~P~~r~~~~a~~~~~g~lyvfGG~~~~~~~l~d~~~~~~~ 316 (975)
.++.+|++|- . ..+++-+-.-. +|+.+......|. .....+...++.+|+.|... .++.-.+.
T Consensus 88 ~~~~~~~~g~-~-----g~i~~S~DgG~--tW~~~~~~~~~~~--~~~~i~~~~~~~~~~~~~~g-------~v~~S~Dg 150 (327)
T 2xbg_A 88 QGNEGWIVGE-P-----PIMLHTTDGGQ--SWSQIPLDPKLPG--SPRLIKALGNGSAEMITNVG-------AIYRTKDS 150 (327)
T ss_dssp ETTEEEEEEE-T-----TEEEEESSTTS--SCEECCCCTTCSS--CEEEEEEEETTEEEEEETTC-------CEEEESST
T ss_pred cCCeEEEEEC-C-----CeEEEECCCCC--CceECccccCCCC--CeEEEEEECCCCEEEEeCCc-------cEEEEcCC
Confidence 3347888752 2 24555333334 8999865422221 12233344578888877421 23433232
Q ss_pred CCCeEEEEECCCCCCCCcceeeEEEe-CCEEEEEcCcCCCCCccccCCcEEEEECC-CCeEEEccc
Q 002047 317 RDGRWEWAIAPGVSPSPRYQHAAVFV-NARLHVSGGALGGGRMVEDSSSVAVLDTA-AGVWCDTKS 380 (975)
Q Consensus 317 ~~~~W~w~~~~g~~P~~R~~hs~v~~-~~~L~V~GG~~~~~~~~~~~~dv~~yD~~-t~~W~~v~~ 380 (975)
..+|+-.... .....+++++. ++.+|++|-. ..+++-+-. -.+|+.+..
T Consensus 151 -G~tW~~~~~~----~~~~~~~~~~~~~~~~~~~g~~----------G~~~~S~d~gG~tW~~~~~ 201 (327)
T 2xbg_A 151 -GKNWQALVQE----AIGVMRNLNRSPSGEYVAVSSR----------GSFYSTWEPGQTAWEPHNR 201 (327)
T ss_dssp -TSSEEEEECS----CCCCEEEEEECTTSCEEEEETT----------SSEEEEECTTCSSCEEEEC
T ss_pred -CCCCEEeecC----CCcceEEEEEcCCCcEEEEECC----------CcEEEEeCCCCCceeECCC
Confidence 2356654432 22233444444 4566666521 225555433 578988753
No 222
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=62.16 E-value=2.1e+02 Score=32.33 Aligned_cols=122 Identities=10% Similarity=0.077 Sum_probs=56.4
Q ss_pred cEEEEECCCCcEEEecCCCCCCCCccceEEEEe-CCEEEEEeccCCCCCccccEEEEEcCCCCCcEEEEEecCCCCCCCc
Q 002047 151 DVHCYDVLTNKWSRITPFGEPPTPRAAHVATAV-GTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGPRY 229 (975)
Q Consensus 151 dv~~yD~~t~~W~~l~~~g~~P~pR~~hsa~~~-~~~iyv~GG~~~~~~~~~dv~~yD~~t~~~~W~~v~~~g~~P~~R~ 229 (975)
.+..||.....-..+.... . . -.+++.. +++.++.|+. ...+.+||.... .-..+. + ....
T Consensus 367 ~v~~~~~~~~~~~~~~~~~---~-~-v~~~~~s~dg~~l~~~~~------d~~v~~~~~~~~--~~~~~~--~--~~~~- 428 (577)
T 2ymu_A 367 TVKLWNRNGQLLQTLTGHS---S-S-VRGVAFSPDGQTIASASD------DKTVKLWNRNGQ--LLQTLT--G--HSSS- 428 (577)
T ss_dssp EEEEEETTCCEEEEEECCS---S-C-EEEEEECTTSSCEEEEET------TSEEEEECTTCC--EEEEEE--C--CSSC-
T ss_pred EEEEEcCCCCEEEEecCCC---C-C-eEEEEECCCCCEEEEEeC------CCEEEEEeCCCC--EEEEec--C--CCCC-
Confidence 4667776555444443221 1 1 1112222 3456666664 246788885443 122222 1 1111
Q ss_pred ccEEEEeCCcEEEEEcCCCCCCCCCcEEEEECCCCCcEEEEccCCCCCCCCcceeEEEEEeCCeEEEecCCCC
Q 002047 230 GHVMALVGQRYLMAIGGNDGKRPLADVWALDTAAKPYEWRKLEPEGEGPPPCMYATASARSDGLLLLCGGRDA 302 (975)
Q Consensus 230 ~h~~~~~~~~~lyV~GG~~g~~~~ndv~~yDl~s~~~~W~~v~~~~~~P~~r~~~~a~~~~~g~lyvfGG~~~ 302 (975)
-.+++...++.+++.|+.++ .+..||.... .-..+..... .....+...++++++.|+.++
T Consensus 429 v~~~~~s~d~~~l~~~~~d~-----~v~~w~~~~~--~~~~~~~~~~-----~v~~~~~spd~~~las~~~d~ 489 (577)
T 2ymu_A 429 VWGVAFSPDDQTIASASDDK-----TVKLWNRNGQ--LLQTLTGHSS-----SVRGVAFSPDGQTIASASDDK 489 (577)
T ss_dssp EEEEEECTTSSEEEEEETTS-----EEEEEETTSC--EEEEEECCSS-----CEEEEEECTTSCEEEEEETTS
T ss_pred eEEEEECCCCCEEEEEcCCC-----EEEEEECCCC--EEEEEcCCCC-----CEEEEEEcCCCCEEEEEeCCC
Confidence 11222333445666676554 5777887655 3333332211 222333345777777776543
No 223
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=62.08 E-value=1.4e+02 Score=30.28 Aligned_cols=167 Identities=7% Similarity=0.035 Sum_probs=79.2
Q ss_pred CcEEEEECCCCcEEEecCCCCCCCCccceEEEEe-CCEEEEEeccCCCCCccccEEEEEcCCCCCcEEEEEecCCCCCCC
Q 002047 150 ADVHCYDVLTNKWSRITPFGEPPTPRAAHVATAV-GTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGPR 228 (975)
Q Consensus 150 ~dv~~yD~~t~~W~~l~~~g~~P~pR~~hsa~~~-~~~iyv~GG~~~~~~~~~dv~~yD~~t~~~~W~~v~~~g~~P~~R 228 (975)
..+++||.....-..+... ....-++++.. ++.+|+.... ...+++||..... ...+...+.+ .
T Consensus 100 ~~i~~~d~~g~~~~~~~~~----~~~~~~~i~~~~~g~l~v~~~~------~~~i~~~~~~g~~--~~~~~~~~~~---~ 164 (286)
T 1q7f_A 100 HQIQIYNQYGQFVRKFGAT----ILQHPRGVTVDNKGRIIVVECK------VMRVIIFDQNGNV--LHKFGCSKHL---E 164 (286)
T ss_dssp CEEEEECTTSCEEEEECTT----TCSCEEEEEECTTSCEEEEETT------TTEEEEECTTSCE--EEEEECTTTC---S
T ss_pred CEEEEECCCCcEEEEecCc----cCCCceEEEEeCCCCEEEEECC------CCEEEEEcCCCCE--EEEeCCCCcc---C
Confidence 4678888554444444221 11122344443 3578877542 2568999976531 2333211111 1
Q ss_pred cccEEEEeCCcEEEEEcCCCCCCCCCcEEEEECCCCCcEEEEccCCCCCCCCcceeEEEEEeCCeEEEecCCCCCCCCcc
Q 002047 229 YGHVMALVGQRYLMAIGGNDGKRPLADVWALDTAAKPYEWRKLEPEGEGPPPCMYATASARSDGLLLLCGGRDASSVPLA 308 (975)
Q Consensus 229 ~~h~~~~~~~~~lyV~GG~~g~~~~ndv~~yDl~s~~~~W~~v~~~~~~P~~r~~~~a~~~~~g~lyvfGG~~~~~~~l~ 308 (975)
.-..+++-.++.|||.... .+.|++||+... ....+...+.. ..-...+...++.+|+....++ .
T Consensus 165 ~p~~i~~~~~g~l~v~~~~-----~~~i~~~~~~g~--~~~~~~~~g~~---~~p~~i~~d~~G~l~v~~~~~~-----~ 229 (286)
T 1q7f_A 165 FPNGVVVNDKQEIFISDNR-----AHCVKVFNYEGQ--YLRQIGGEGIT---NYPIGVGINSNGEILIADNHNN-----F 229 (286)
T ss_dssp SEEEEEECSSSEEEEEEGG-----GTEEEEEETTCC--EEEEESCTTTS---CSEEEEEECTTCCEEEEECSSS-----C
T ss_pred CcEEEEECCCCCEEEEECC-----CCEEEEEcCCCC--EEEEEccCCcc---CCCcEEEECCCCCEEEEeCCCC-----E
Confidence 2234444444578887543 257999998665 44444332210 1112223334678888764321 1
Q ss_pred ceEEeecCCCCeEEEEECCCCCCCCcceeeEEEe-CCEEEEEc
Q 002047 309 SAYGLAKHRDGRWEWAIAPGVSPSPRYQHAAVFV-NARLHVSG 350 (975)
Q Consensus 309 d~~~~~~~~~~~W~w~~~~g~~P~~R~~hs~v~~-~~~L~V~G 350 (975)
.+..|+......+.+.... +.. .-+++++. +++|||..
T Consensus 230 ~i~~~~~~g~~~~~~~~~~---~~~-~~~~i~~~~~g~l~vs~ 268 (286)
T 1q7f_A 230 NLTIFTQDGQLISALESKV---KHA-QCFDVALMDDGSVVLAS 268 (286)
T ss_dssp EEEEECTTSCEEEEEEESS---CCS-CEEEEEEETTTEEEEEE
T ss_pred EEEEECCCCCEEEEEcccC---CCC-cceeEEECCCCcEEEEC
Confidence 4566654322122222211 111 12233443 67888873
No 224
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=61.86 E-value=1.5e+02 Score=30.53 Aligned_cols=119 Identities=13% Similarity=0.150 Sum_probs=52.6
Q ss_pred EEEEEcCCCCCCCCCcEEEEECCCCCcEEEEccCCCCCCCCcceeEEEEEe-C---CeEEEecCCCCCCCCccceEEeec
Q 002047 240 YLMAIGGNDGKRPLADVWALDTAAKPYEWRKLEPEGEGPPPCMYATASARS-D---GLLLLCGGRDASSVPLASAYGLAK 315 (975)
Q Consensus 240 ~lyV~GG~~g~~~~ndv~~yDl~s~~~~W~~v~~~~~~P~~r~~~~a~~~~-~---g~lyvfGG~~~~~~~l~d~~~~~~ 315 (975)
.+++.|+.++ .+..||+.+..-.|..+...... ...-.++... + +.+++.|+.++. -.+|.+..
T Consensus 171 ~~l~sgs~D~-----~v~lwd~~~~~~~~~~~~~l~~H---~~~V~~v~~sp~~~~~~~las~s~D~~----v~iWd~~~ 238 (297)
T 2pm7_B 171 RKFVTGGADN-----LVKIWKYNSDAQTYVLESTLEGH---SDWVRDVAWSPTVLLRSYMASVSQDRT----CIIWTQDN 238 (297)
T ss_dssp CEEEEEETTS-----CEEEEEEETTTTEEEEEEEECCC---SSCEEEEEECCCCSSSEEEEEEETTSC----EEEEEESS
T ss_pred ceEEEEcCCC-----cEEEEEEcCCCceEEEEEEecCC---CCceEEEEECCCCCCceEEEEEECCCc----EEEEEeCC
Confidence 4677777665 45666665432245443322110 0111222222 2 467777776543 23444432
Q ss_pred CCCCeEEEEECCCCCCCCcceeeEEEe-CCEEEEEcCcCCCCCccccCCcEEEEECC-CCeEEEcccC
Q 002047 316 HRDGRWEWAIAPGVSPSPRYQHAAVFV-NARLHVSGGALGGGRMVEDSSSVAVLDTA-AGVWCDTKSV 381 (975)
Q Consensus 316 ~~~~~W~w~~~~g~~P~~R~~hs~v~~-~~~L~V~GG~~~~~~~~~~~~dv~~yD~~-t~~W~~v~~~ 381 (975)
. ...|.-...... .....-.++++. ++.+++.||.++. |.+++.. .+.|..+..+
T Consensus 239 ~-~~~~~~~~~~~~-~~~~~v~~~~~s~~g~~las~~~D~~---------v~lw~~~~~g~w~~~~~~ 295 (297)
T 2pm7_B 239 E-QGPWKKTLLKEE-KFPDVLWRASWSLSGNVLALSGGDNK---------VTLWKENLEGKWEPAGEV 295 (297)
T ss_dssp T-TSCCEEEESSSS-CCSSCEEEEEECSSSCCEEEEETTSC---------EEEEEECTTSCEEEC---
T ss_pred C-CCccceeeeecc-cCCCcEEEEEECCCCCEEEEEcCCCc---------EEEEEECCCCcEEecccc
Confidence 2 123333232111 111122233333 5677788876432 4455544 4689877654
No 225
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=61.64 E-value=1.6e+02 Score=30.90 Aligned_cols=203 Identities=11% Similarity=0.024 Sum_probs=100.1
Q ss_pred CcEEEEECCCCcEEEecCCCCCCCCccceEEEEe-CCEEEEEeccCCCCCccccEEEEEcCCCCCcEEEEEec---CCCC
Q 002047 150 ADVHCYDVLTNKWSRITPFGEPPTPRAAHVATAV-GTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQ---GPGP 225 (975)
Q Consensus 150 ~dv~~yD~~t~~W~~l~~~g~~P~pR~~hsa~~~-~~~iyv~GG~~~~~~~~~dv~~yD~~t~~~~W~~v~~~---g~~P 225 (975)
+.++.+|+.+.+.......+ .. ..-+++++. ++.||+.... ...+++||+......-..+... |...
T Consensus 69 ~~i~~~d~~~g~~~~~~~~~--~~-~~p~gia~d~~g~l~v~d~~------~~~v~~~~~~g~~~~~~~~~~~~~~g~~~ 139 (329)
T 3fvz_A 69 DTILVIDPNNAEILQSSGKN--LF-YLPHGLSIDTDGNYWVTDVA------LHQVFKLDPHSKEGPLLILGRSMQPGSDQ 139 (329)
T ss_dssp CCEEEECTTTCCEEEEECTT--TC-SSEEEEEECTTSCEEEEETT------TTEEEEECTTCSSCCSEEESBTTBCCCST
T ss_pred CcEEEEECCCCeEEeccCCC--cc-CCceEEEECCCCCEEEEECC------CCEEEEEeCCCCeEEEEEecccCCCCCCc
Confidence 57999999887765443221 11 122344444 4578887643 3568999986541011222111 1001
Q ss_pred CCC-cccEEEEeC-CcEEEEEcCCCCCCCCCcEEEEECCCCCcEEEEccCCCCC----CCCcceeEEEEE-eC-CeEEEe
Q 002047 226 GPR-YGHVMALVG-QRYLMAIGGNDGKRPLADVWALDTAAKPYEWRKLEPEGEG----PPPCMYATASAR-SD-GLLLLC 297 (975)
Q Consensus 226 ~~R-~~h~~~~~~-~~~lyV~GG~~g~~~~ndv~~yDl~s~~~~W~~v~~~~~~----P~~r~~~~a~~~-~~-g~lyvf 297 (975)
... .-..+++.. ++.|||..+.. .+.|.+||.... .-..+...+.. +.....-..+++ .+ +.||+.
T Consensus 140 ~~~~~P~~ia~~~~~g~lyv~d~~~----~~~I~~~~~~g~--~~~~~~~~g~~~~~~~~~~~~p~gia~d~~~g~l~v~ 213 (329)
T 3fvz_A 140 NHFCQPTDVAVEPSTGAVFVSDGYC----NSRIVQFSPSGK--FVTQWGEESSGSSPRPGQFSVPHSLALVPHLDQLCVA 213 (329)
T ss_dssp TCCSSEEEEEECTTTCCEEEEECSS----CCEEEEECTTSC--EEEEECEECCSSSCCTTEESCEEEEEEETTTTEEEEE
T ss_pred cccCCCcEEEEeCCCCeEEEEeCCC----CCeEEEEcCCCC--EEEEeccCCCCCCCCCcccCCCcEEEEECCCCEEEEE
Confidence 111 122344443 55899987521 257899996544 22233221111 111111223333 34 899998
Q ss_pred cCCCCCCCCccceEEeecCCCCeEEEEECCCCCCCCcceeeEEEeCCEEEEEcCcCCCCCccccCCcEEEEECCCCeEEE
Q 002047 298 GGRDASSVPLASAYGLAKHRDGRWEWAIAPGVSPSPRYQHAAVFVNARLHVSGGALGGGRMVEDSSSVAVLDTAAGVWCD 377 (975)
Q Consensus 298 GG~~~~~~~l~d~~~~~~~~~~~W~w~~~~g~~P~~R~~hs~v~~~~~L~V~GG~~~~~~~~~~~~dv~~yD~~t~~W~~ 377 (975)
...+ ..+..|+.. ++++....... .....-.+.++..+.+|+..|...-.. .....+.++|+.+.+...
T Consensus 214 d~~~------~~I~~~~~~-~G~~~~~~~~~--~~~~~~~~~~~~pg~~~~~~g~~~v~~--~~~~~v~~~~~~~g~~~~ 282 (329)
T 3fvz_A 214 DREN------GRIQCFKTD-TKEFVREIKHA--SFGRNVFAISYIPGFLFAVNGKPYFGD--QEPVQGFVMNFSSGEIID 282 (329)
T ss_dssp ETTT------TEEEEEETT-TCCEEEEECCT--TTTTCEEEEEEETTEEEEEECCCCTTC--SCCCCEEEEETTTCCEEE
T ss_pred ECCC------CEEEEEECC-CCcEEEEEecc--ccCCCcceeeecCCEEEEeCCCEEecc--CCCcEEEEEEcCCCeEEE
Confidence 6432 345566554 33443333221 122222344555578888777532111 124579999998887655
Q ss_pred c
Q 002047 378 T 378 (975)
Q Consensus 378 v 378 (975)
.
T Consensus 283 ~ 283 (329)
T 3fvz_A 283 V 283 (329)
T ss_dssp E
T ss_pred E
Confidence 4
No 226
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=61.38 E-value=28 Score=38.60 Aligned_cols=66 Identities=9% Similarity=-0.031 Sum_probs=33.5
Q ss_pred EEEEeccCCCCCccccEEEEEcCCCCC-cEEEEEecCCC-CCCCcccEEEEeC-CcEEEEEcCCCCCCCCCcEEEEECCC
Q 002047 187 VVIQGGIGPAGLSAEDLHVLDLTQQRP-RWHRVVVQGPG-PGPRYGHVMALVG-QRYLMAIGGNDGKRPLADVWALDTAA 263 (975)
Q Consensus 187 iyv~GG~~~~~~~~~dv~~yD~~t~~~-~W~~v~~~g~~-P~~R~~h~~~~~~-~~~lyV~GG~~g~~~~ndv~~yDl~s 263 (975)
+++.|+. ...+.+||+.+... .+...... .. .....-++++... ++.+++.|+.++ .+.+||+.+
T Consensus 196 ~l~s~~~------dg~i~vwd~~~~~~~~~~~~~~~-~~~~h~~~v~~v~~~p~~~~~l~s~~~dg-----~i~i~d~~~ 263 (430)
T 2xyi_A 196 YLLSASD------DHTICLWDINATPKEHRVIDAKN-IFTGHTAVVEDVAWHLLHESLFGSVADDQ-----KLMIWDTRN 263 (430)
T ss_dssp EEEEECT------TSCEEEEETTSCCBGGGEEECSE-EECCCSSCEEEEEECSSCTTEEEEEETTS-----EEEEEETTC
T ss_pred eEEEEeC------CCeEEEEeCCCCCCCCceeccce-eecCCCCCEeeeEEeCCCCCEEEEEeCCC-----eEEEEECCC
Confidence 6666664 35689999987321 12211000 01 1111122333322 335777776553 688999976
Q ss_pred C
Q 002047 264 K 264 (975)
Q Consensus 264 ~ 264 (975)
.
T Consensus 264 ~ 264 (430)
T 2xyi_A 264 N 264 (430)
T ss_dssp S
T ss_pred C
Confidence 5
No 227
>1pex_A Collagenase-3, MMP-13; C-terminal hemopexin-like domain of matrix- metalloproteinase, metalloprotease; 2.70A {Homo sapiens} SCOP: b.66.1.1
Probab=60.25 E-value=1.4e+02 Score=29.83 Aligned_cols=156 Identities=13% Similarity=0.036 Sum_probs=81.1
Q ss_pred EEEEeCCEEEEEeccCCCCCccccEEEEEcCCCCCcEEEEEec---CCCCCCCcccEEEEeC-CcEEEEEcCCCCCCCCC
Q 002047 179 VATAVGTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQ---GPGPGPRYGHVMALVG-QRYLMAIGGNDGKRPLA 254 (975)
Q Consensus 179 sa~~~~~~iyv~GG~~~~~~~~~dv~~yD~~t~~~~W~~v~~~---g~~P~~R~~h~~~~~~-~~~lyV~GG~~g~~~~n 254 (975)
+++.+.+.+|+|=|. -+|+++..... +....+. ..+|. ... ++.... ++++|+|=| +
T Consensus 28 Ai~~~~g~~y~Fkg~--------~~wr~~~~~~~--~~p~~I~~~wp~Lp~-~iD-Aa~~~~~~~~iyfFkG-------~ 88 (207)
T 1pex_A 28 AITSLRGETMIFKDR--------FFWRLHPQQVD--AELFLTKSFWPELPN-RID-AAYEHPSHDLIFIFRG-------R 88 (207)
T ss_dssp EEEEETTEEEEEETT--------EEEEECSSSSC--CEEEEHHHHCTTSCS-SCC-EEEEETTTTEEEEEET-------T
T ss_pred EEEeCCCcEEEEECC--------EEEEEeCCCcC--CCceehhHhccCCCC-Ccc-EEEEeccCCcEEEEcc-------C
Confidence 455568899999663 57777755432 3322221 13442 222 222232 348999977 4
Q ss_pred cEEEEECCCCCcEE-EEccCCCCCCCCcceeEEEEEe-CCeEEEecCCCCCCCCccceEEeecCCCCeEEEEECCCCC--
Q 002047 255 DVWALDTAAKPYEW-RKLEPEGEGPPPCMYATASARS-DGLLLLCGGRDASSVPLASAYGLAKHRDGRWEWAIAPGVS-- 330 (975)
Q Consensus 255 dv~~yDl~s~~~~W-~~v~~~~~~P~~r~~~~a~~~~-~g~lyvfGG~~~~~~~l~d~~~~~~~~~~~W~w~~~~g~~-- 330 (975)
.+|+|+-.+....+ ..+...+-+..+..-.+|.... ++++|+|-| +..|.|+.... + . ..+.+
T Consensus 89 ~~w~~~~~~~~~gyPk~I~~~GlP~~~~~IDAA~~~~~~gk~yfFkG--------~~ywr~d~~~~---~-~-d~gyPr~ 155 (207)
T 1pex_A 89 KFWALNGYDILEGYPKKISELGLPKEVKKISAAVHFEDTGKTLLFSG--------NQVWRYDDTNH---I-M-DKDYPRL 155 (207)
T ss_dssp EEEEESTTCCCTTCSEESTTTTCCTTCCCCCEEEECTTTSEEEEEET--------TEEEEEETTTT---E-E-CSSCCCB
T ss_pred EEEEEeCCeeccCCceeccccCCCCCCccccEEEEeCCCCEEEEEeC--------CEEEEEeCcCc---c-c-cCCCCcc
Confidence 67888743320011 2343333322222344444443 489999976 34577765432 1 1 11110
Q ss_pred ------CCCcceeeEEEeCCEEEEEcCcCCCCCccccCCcEEEEECCCCeEEE
Q 002047 331 ------PSPRYQHAAVFVNARLHVSGGALGGGRMVEDSSSVAVLDTAAGVWCD 377 (975)
Q Consensus 331 ------P~~R~~hs~v~~~~~L~V~GG~~~~~~~~~~~~dv~~yD~~t~~W~~ 377 (975)
-.+..-.++...++++|+|-| +..|+||..+.+=..
T Consensus 156 i~~~~~Gip~~iDaAf~~~g~~YfFkg-----------~~y~rf~~~~~~v~~ 197 (207)
T 1pex_A 156 IEEDFPGIGDKVDAVYEKNGYIYFFNG-----------PIQFEYSIWSNRIVR 197 (207)
T ss_dssp HHHHSTTSCSCCSEEEEETTEEEEEET-----------TEEEEEETTTTEEEE
T ss_pred HHHcCCCCCCCccEEEEcCCcEEEEEC-----------CEEEEEeCCccEEec
Confidence 011223344456899999965 348899988876443
No 228
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=60.21 E-value=88 Score=33.24 Aligned_cols=98 Identities=16% Similarity=0.143 Sum_probs=40.4
Q ss_pred cEEEEECCCCc-EEEecCCCCCCCCccceEEEEe-CCEEEEEeccCCCCCccccEEEEEcCCCCCcEEEEEecCCCCCCC
Q 002047 151 DVHCYDVLTNK-WSRITPFGEPPTPRAAHVATAV-GTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGPR 228 (975)
Q Consensus 151 dv~~yD~~t~~-W~~l~~~g~~P~pR~~hsa~~~-~~~iyv~GG~~~~~~~~~dv~~yD~~t~~~~W~~v~~~g~~P~~R 228 (975)
.+.+||+.+.. |....... .....-.+++.. ++.+++.|+. ...+.+||+.+.. .|...... ..+...
T Consensus 78 ~v~vwd~~~~~~~~~~~~~~--~~~~~v~~~~~~~~~~~l~~~~~------d~~i~iwd~~~~~-~~~~~~~~-~~~h~~ 147 (377)
T 3dwl_C 78 NAYVYEKRPDGTWKQTLVLL--RLNRAATFVRWSPNEDKFAVGSG------ARVISVCYFEQEN-DWWVSKHL-KRPLRS 147 (377)
T ss_dssp SEEEC------CCCCEEECC--CCSSCEEEEECCTTSSCCEEEES------SSCEEECCC------CCCCEEE-CSSCCS
T ss_pred eEEEEEcCCCCceeeeeEec--ccCCceEEEEECCCCCEEEEEec------CCeEEEEEECCcc-cceeeeEe-ecccCC
Confidence 57778887765 44332221 111111222222 3456666664 3468888887753 23222211 111222
Q ss_pred cccEEEEeCCcEEEEEcCCCCCCCCCcEEEEECCC
Q 002047 229 YGHVMALVGQRYLMAIGGNDGKRPLADVWALDTAA 263 (975)
Q Consensus 229 ~~h~~~~~~~~~lyV~GG~~g~~~~ndv~~yDl~s 263 (975)
.-.+++...++.+++.|+.++ .+..||+.+
T Consensus 148 ~v~~~~~~~~~~~l~~~~~d~-----~i~iwd~~~ 177 (377)
T 3dwl_C 148 TILSLDWHPNNVLLAAGCADR-----KAYVLSAYV 177 (377)
T ss_dssp CEEEEEECTTSSEEEEEESSS-----CEEEEEECC
T ss_pred CeEEEEEcCCCCEEEEEeCCC-----EEEEEEEEe
Confidence 222333334446777777664 577788753
No 229
>1itv_A MMP9; adaptive molecular recognition, beta propeller, dimer, hydrolase; 1.95A {Homo sapiens} SCOP: b.66.1.1
Probab=60.03 E-value=1.4e+02 Score=29.60 Aligned_cols=157 Identities=14% Similarity=0.140 Sum_probs=81.7
Q ss_pred eEEEEeCCEEEEEeccCCCCCccccEEEEEcCCCCCcEEEEEec---CCCCCCCcccEEEEe-CCcEEEEEcCCCCCCCC
Q 002047 178 HVATAVGTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQ---GPGPGPRYGHVMALV-GQRYLMAIGGNDGKRPL 253 (975)
Q Consensus 178 hsa~~~~~~iyv~GG~~~~~~~~~dv~~yD~~t~~~~W~~v~~~---g~~P~~R~~h~~~~~-~~~~lyV~GG~~g~~~~ 253 (975)
=+++.+++++|+|=|. -+|+++............+. ..+|.. -. ++... .++++|+|-|
T Consensus 10 DAi~~~~g~~yfFkg~--------~~Wr~~~~~~~~~~~p~~Is~~w~glP~~-ID-Aa~~~~~~~~~yfFkG------- 72 (195)
T 1itv_A 10 DAIAEIGNQLYLFKDG--------KYWRFSEGRGSRPQGPFLIADKWPALPRK-LD-SVFEEPLSKKLFFFSG------- 72 (195)
T ss_dssp SEEEEETTEEEEEETT--------EEEEECCSSSCCCEEEEEHHHHCTTSCSS-CS-EEEECTTTCCEEEEET-------
T ss_pred CEEEEeCCEEEEEECC--------EEEEEECCccccCCCcEEhhhccCCCCCC-cc-EEEEECCCCeEEEEeC-------
Confidence 3455678899999763 57888765420112222221 134432 22 22233 2347999977
Q ss_pred CcEEEEECCCCCcEEEEccCCCCCCCCcceeEEEEEeCCeEEEecCCCCCCCCccceEEeecCCCC---eEEEEE---CC
Q 002047 254 ADVWALDTAAKPYEWRKLEPEGEGPPPCMYATASARSDGLLLLCGGRDASSVPLASAYGLAKHRDG---RWEWAI---AP 327 (975)
Q Consensus 254 ndv~~yDl~s~~~~W~~v~~~~~~P~~r~~~~a~~~~~g~lyvfGG~~~~~~~l~d~~~~~~~~~~---~W~w~~---~~ 327 (975)
+..|+|+..+.. .=+.+...+.+.......+|....++++|+|-| +..|.|+..+.. ..-+.. -+
T Consensus 73 ~~yw~~~~~~~~-~Pk~i~~~G~p~~~~~iDAA~~~~~g~~yfFkg--------~~ywr~d~~~~~~~~gyPr~i~~~w~ 143 (195)
T 1itv_A 73 RQVWVYTGASVL-GPRRLDKLGLGADVAQVTGALRSGRGKMLLFSG--------RRLWRFDVKAQMVDPRSASEVDRMFP 143 (195)
T ss_dssp TEEEEEETTEEE-EEEEGGGGTCCTTCCCCCEEEECSTTEEEEEET--------TEEEEEETTTTEECGGGCEEHHHHST
T ss_pred CEEEEEcCCccC-CCEEeeecccCCCccceeEEEEcCCCeEEEEeC--------CEEEEEeCCcccccCCCccChhhcCC
Confidence 568888864320 112233333221122344555555789999966 245777654320 000000 01
Q ss_pred CCCCCCcceeeEEEeCCEEEEEcCcCCCCCccccCCcEEEEECCCCe
Q 002047 328 GVSPSPRYQHAAVFVNARLHVSGGALGGGRMVEDSSSVAVLDTAAGV 374 (975)
Q Consensus 328 g~~P~~R~~hs~v~~~~~L~V~GG~~~~~~~~~~~~dv~~yD~~t~~ 374 (975)
+. +..-.++...++.+|.|-| +..|.||..+..
T Consensus 144 Gv---p~~idaa~~~~g~~Yffkg-----------~~y~~~~~~~~~ 176 (195)
T 1itv_A 144 GV---PLDTHDVFQFREKAYFCQD-----------RFYWRVSSRSEL 176 (195)
T ss_dssp TS---CSSCSEEEEETTEEEEEET-----------TEEEEEECCTTC
T ss_pred CC---CCCCCEEEEeCCeEEEEeC-----------CEEEEEECCccE
Confidence 22 2223455556799999865 237888887764
No 230
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=60.03 E-value=2.3e+02 Score=33.75 Aligned_cols=151 Identities=13% Similarity=0.085 Sum_probs=76.8
Q ss_pred cccEEEEEcCCCCCc-EEEEEecCCCCCCCcccEEEEeCCcEEEEEcCCCCCCCCCcEEEEECCC--CCcEEEEccCCCC
Q 002047 200 AEDLHVLDLTQQRPR-WHRVVVQGPGPGPRYGHVMALVGQRYLMAIGGNDGKRPLADVWALDTAA--KPYEWRKLEPEGE 276 (975)
Q Consensus 200 ~~dv~~yD~~t~~~~-W~~v~~~g~~P~~R~~h~~~~~~~~~lyV~GG~~g~~~~ndv~~yDl~s--~~~~W~~v~~~~~ 276 (975)
.+++|++|+.+...+ |..+... .... ...+.-.++.||+..-.+ .....++++|+.+ . .|+.+.+...
T Consensus 293 ~~~l~~~d~~~~~~~~~~~l~~~---~~~~--~~~~~~dg~~l~~~s~~~--~~~~~l~~~d~~~~~~--~~~~l~~~~~ 363 (741)
T 1yr2_A 293 VNTVHVARVTNGKIGPVTALIPD---LKAQ--WDFVDGVGDQLWFVSGDG--APLKKIVRVDLSGSTP--RFDTVVPESK 363 (741)
T ss_dssp CCEEEEEEEETTEECCCEEEECS---SSSC--EEEEEEETTEEEEEECTT--CTTCEEEEEECSSSSC--EEEEEECCCS
T ss_pred cceEEEEECCCCCCcccEEecCC---CCce--EEEEeccCCEEEEEECCC--CCCCEEEEEeCCCCcc--ccEEEecCCC
Confidence 568999998764224 7777521 1111 222223444777765432 2245799999987 5 7988865432
Q ss_pred CCCCcceeEEEEEeCCeEEEecCCCCCCCCccceEEeecCCCCeEEEEECCCCCCCCcceeeEEE-eCC-EEEEE-cCcC
Q 002047 277 GPPPCMYATASARSDGLLLLCGGRDASSVPLASAYGLAKHRDGRWEWAIAPGVSPSPRYQHAAVF-VNA-RLHVS-GGAL 353 (975)
Q Consensus 277 ~P~~r~~~~a~~~~~g~lyvfGG~~~~~~~l~d~~~~~~~~~~~W~w~~~~g~~P~~R~~hs~v~-~~~-~L~V~-GG~~ 353 (975)
. . -..+...++.+++....++ ...+|.++.... ....+. .|....-..... -++ .|++. .+..
T Consensus 364 ~----~-l~~~~~~~~~lv~~~~~dg----~~~l~~~~~~g~---~~~~l~--~~~~~~v~~~~~s~d~~~l~~~~ss~~ 429 (741)
T 1yr2_A 364 D----N-LESVGIAGNRLFASYIHDA----KSQVLAFDLDGK---PAGAVS--LPGIGSASGLSGRPGDRHAYLSFSSFT 429 (741)
T ss_dssp S----E-EEEEEEEBTEEEEEEEETT----EEEEEEEETTSC---EEEECB--CSSSCEEEEEECCBTCSCEEEEEEETT
T ss_pred C----e-EEEEEEECCEEEEEEEECC----EEEEEEEeCCCC---ceeecc--CCCCeEEEEeecCCCCCEEEEEEcCCC
Confidence 1 1 1223344778877765443 344666653221 112221 111111111111 122 33332 2211
Q ss_pred CCCCccccCCcEEEEECCCCeEEEccc
Q 002047 354 GGGRMVEDSSSVAVLDTAAGVWCDTKS 380 (975)
Q Consensus 354 ~~~~~~~~~~dv~~yD~~t~~W~~v~~ 380 (975)
....++.||+.+++.+.+..
T Consensus 430 -------~P~~i~~~d~~tg~~~~l~~ 449 (741)
T 1yr2_A 430 -------QPATVLALDPATAKTTPWEP 449 (741)
T ss_dssp -------EEEEEEEEETTTTEEEECSC
T ss_pred -------CCCEEEEEECCCCcEEEEec
Confidence 13569999999998776644
No 231
>2wdc_A SOXB, sulfur oxidation protein SOXB; sulfur-sulfur hydrolysis, sulfur oxidation pathway, Cys S-thiosulfonate, hydrolase; 1.50A {Thermus thermophilus} PDB: 2wdd_A* 2wde_A 2wdf_A
Probab=59.10 E-value=4.9 Score=47.46 Aligned_cols=36 Identities=14% Similarity=-0.026 Sum_probs=24.1
Q ss_pred eEEEeccccCCCCCh-----HHHHHHHHHhhhcCCCCEEEEeccccc
Q 002047 733 DYLFLGDYVDRGQHS-----LETITLLLALKVEYPNNVHLIRGNHEA 774 (975)
Q Consensus 733 ~~vfLGDyVDRG~~s-----~evl~ll~~lk~~~P~~v~llrGNHE~ 774 (975)
-+|..||++++.+.+ ..++.+|-.|. | .+ +. ||||.
T Consensus 126 Lll~~GD~~~gs~~~~~~~g~~~~~~ln~lg--~--d~-~~-GNHEf 166 (562)
T 2wdc_A 126 LVLDGGDTWTNSGLSLLTRGEAVVRWQNLVG--V--DH-MV-SHWEW 166 (562)
T ss_dssp EEEECSCCSSSSHHHHHHTTHHHHHHHHHHT--C--CE-EC-CSGGG
T ss_pred EEEeCCCCCCcchhhhhhCCHHHHHHHHhhC--C--cE-Ee-cchhc
Confidence 466799999976533 35566666654 2 24 46 99996
No 232
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=59.04 E-value=1.9e+02 Score=30.78 Aligned_cols=85 Identities=13% Similarity=0.080 Sum_probs=42.3
Q ss_pred cccEEEEEcCCCCCcEEEEEecCCCCCCCcccEEEEe--C-CcEEEEEcCCCCCCCCCcEEEEECCCCCcEEEEccCCCC
Q 002047 200 AEDLHVLDLTQQRPRWHRVVVQGPGPGPRYGHVMALV--G-QRYLMAIGGNDGKRPLADVWALDTAAKPYEWRKLEPEGE 276 (975)
Q Consensus 200 ~~dv~~yD~~t~~~~W~~v~~~g~~P~~R~~h~~~~~--~-~~~lyV~GG~~g~~~~ndv~~yDl~s~~~~W~~v~~~~~ 276 (975)
...+.+||+.+.. .-..+. +. ...-.++.+ . ++.+++.|+.++ .+..||+.+. +....-....
T Consensus 175 D~~v~lwd~~~~~-~~~~~~--~h----~~~v~~~~~~~~~~g~~l~sgs~Dg-----~v~~wd~~~~--~~~~~~~~h~ 240 (354)
T 2pbi_B 175 DGTCALWDVESGQ-LLQSFH--GH----GADVLCLDLAPSETGNTFVSGGCDK-----KAMVWDMRSG--QCVQAFETHE 240 (354)
T ss_dssp TSEEEEEETTTCC-EEEEEE--CC----SSCEEEEEECCCSSCCEEEEEETTS-----CEEEEETTTC--CEEEEECCCS
T ss_pred CCcEEEEeCCCCe-EEEEEc--CC----CCCeEEEEEEeCCCCCEEEEEeCCC-----eEEEEECCCC--cEEEEecCCC
Confidence 3578899998763 112221 11 011111222 1 225777787765 5888999887 4433211111
Q ss_pred CCCCcceeEEEEEeCCeEEEecCCCC
Q 002047 277 GPPPCMYATASARSDGLLLLCGGRDA 302 (975)
Q Consensus 277 ~P~~r~~~~a~~~~~g~lyvfGG~~~ 302 (975)
......+...++.+++.|+.++
T Consensus 241 ----~~v~~v~~~p~~~~l~s~s~D~ 262 (354)
T 2pbi_B 241 ----SDVNSVRYYPSGDAFASGSDDA 262 (354)
T ss_dssp ----SCEEEEEECTTSSEEEEEETTS
T ss_pred ----CCeEEEEEeCCCCEEEEEeCCC
Confidence 1112222334677778887654
No 233
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=58.92 E-value=3e+02 Score=33.09 Aligned_cols=190 Identities=11% Similarity=0.042 Sum_probs=94.9
Q ss_pred cEEEEECCCCcEEEecCCCCCC----CCccceEEEEe-CCE-EEEEeccCCCCCccccEEEEEcCCCCCcEEEEEecC-C
Q 002047 151 DVHCYDVLTNKWSRITPFGEPP----TPRAAHVATAV-GTM-VVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQG-P 223 (975)
Q Consensus 151 dv~~yD~~t~~W~~l~~~g~~P----~pR~~hsa~~~-~~~-iyv~GG~~~~~~~~~dv~~yD~~t~~~~W~~v~~~g-~ 223 (975)
-+++||..+..++........+ ....-++++.. ++. |+|. .. ..-+++||..+.. +....... .
T Consensus 378 Gl~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~i~~d~~g~~lWig-t~------~~Gl~~~d~~~~~--~~~~~~~~~~ 448 (795)
T 4a2l_A 378 GLNLYNPITQRFTSYTLQEDESARGIGSNNIKAVYVDEKKSLVYIG-TH------AGGLSILHRNSGQ--VENFNQRNSQ 448 (795)
T ss_dssp CEEEECTTTCCEEEECCC------CCSCSCEEEEEEETTTTEEEEE-ET------TTEEEEEETTTCC--EEEECTTTSC
T ss_pred CeEEEcCCCCcEEEEecCCCCcccCCCCccEEEEEEcCCCCEEEEE-eC------cCceeEEeCCCCc--EEEeecCCCC
Confidence 6888898888888775321001 11222344443 345 6653 22 1358899988764 66654211 1
Q ss_pred CCCCCcccEEEEeCCcEEEEEcCCCCCCCCCcEEEEECCCCCcEEEEccCCCCC--CCCcceeEEEEEeCCeEEEecCCC
Q 002047 224 GPGPRYGHVMALVGQRYLMAIGGNDGKRPLADVWALDTAAKPYEWRKLEPEGEG--PPPCMYATASARSDGLLLLCGGRD 301 (975)
Q Consensus 224 ~P~~R~~h~~~~~~~~~lyV~GG~~g~~~~ndv~~yDl~s~~~~W~~v~~~~~~--P~~r~~~~a~~~~~g~lyvfGG~~ 301 (975)
++.. .-.+++.-.++.||+... +.+++||+.+. +|+........ ...........-.++.||+...
T Consensus 449 l~~~-~v~~i~~d~~g~lwigt~-------~Gl~~~~~~~~--~~~~~~~~~~~~~~~~~~i~~i~~d~~g~lWigt~-- 516 (795)
T 4a2l_A 449 LVNE-NVYAILPDGEGNLWLGTL-------SALVRFNPEQR--SFTTIEKEKDGTPVVSKQITTLFRDSHKRLWIGGE-- 516 (795)
T ss_dssp CSCS-CEEEEEECSSSCEEEEES-------SCEEEEETTTT--EEEECCBCTTCCBCCCCCEEEEEECTTCCEEEEES--
T ss_pred cCCC-eeEEEEECCCCCEEEEec-------CceeEEeCCCC--eEEEccccccccccCCceEEEEEECCCCCEEEEeC--
Confidence 1211 112222233346777542 34899999998 88887543110 0001122223334678888543
Q ss_pred CCCCCccceEEeecCCCCeEEEEECC-CCCCCC-cceeeEEE-eCCEEEEEcCcCCCCCccccCCcEEEEECCCCeEEEc
Q 002047 302 ASSVPLASAYGLAKHRDGRWEWAIAP-GVSPSP-RYQHAAVF-VNARLHVSGGALGGGRMVEDSSSVAVLDTAAGVWCDT 378 (975)
Q Consensus 302 ~~~~~l~d~~~~~~~~~~~W~w~~~~-g~~P~~-R~~hs~v~-~~~~L~V~GG~~~~~~~~~~~~dv~~yD~~t~~W~~v 378 (975)
..++.++.... .+. .... .....+ ..-.+++. -++.|+|- .. ..+++||+.+.++...
T Consensus 517 ------~Gl~~~~~~~~-~~~-~~~~~~~~~l~~~~i~~i~~d~~g~lWig-T~----------~Gl~~~d~~~~~~~~~ 577 (795)
T 4a2l_A 517 ------EGLSVFKQEGL-DIQ-KASILPVSNVTKLFTNCIYEASNGIIWVG-TR----------EGFYCFNEKDKQIKRY 577 (795)
T ss_dssp ------SCEEEEEEETT-EEE-ECCCSCSCGGGGSCEEEEEECTTSCEEEE-ES----------SCEEEEETTTTEEEEE
T ss_pred ------CceEEEeCCCC-eEE-EecCCCCCCCCCCeeEEEEECCCCCEEEE-eC----------CCceeECCCCCcEEEe
Confidence 12566665544 331 1100 110011 11122222 24677763 21 1388999999998876
Q ss_pred cc
Q 002047 379 KS 380 (975)
Q Consensus 379 ~~ 380 (975)
..
T Consensus 578 ~~ 579 (795)
T 4a2l_A 578 NT 579 (795)
T ss_dssp CG
T ss_pred CC
Confidence 43
No 234
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=58.64 E-value=1.6e+02 Score=29.81 Aligned_cols=106 Identities=9% Similarity=0.019 Sum_probs=48.9
Q ss_pred EEEEEcCCCCCCCCCcEEEEECCCCCcEEEEccCCCCCCCCcceeEEEEEeCCeEEEecCCCCCCCCccceEEeecCCCC
Q 002047 240 YLMAIGGNDGKRPLADVWALDTAAKPYEWRKLEPEGEGPPPCMYATASARSDGLLLLCGGRDASSVPLASAYGLAKHRDG 319 (975)
Q Consensus 240 ~lyV~GG~~g~~~~ndv~~yDl~s~~~~W~~v~~~~~~P~~r~~~~a~~~~~g~lyvfGG~~~~~~~l~d~~~~~~~~~~ 319 (975)
.+++.|+.++ .+..||.... -..+..... ..........++. ++.|+.++ .+..++.....
T Consensus 156 ~~l~~~~~d~-----~i~i~d~~~~---~~~~~~~~~----~~i~~~~~~~~~~-~~~~~~dg------~i~i~d~~~~~ 216 (313)
T 3odt_A 156 NKFLTASADK-----TIKLWQNDKV---IKTFSGIHN----DVVRHLAVVDDGH-FISCSNDG------LIKLVDMHTGD 216 (313)
T ss_dssp TEEEEEETTS-----CEEEEETTEE---EEEECSSCS----SCEEEEEEEETTE-EEEEETTS------EEEEEETTTCC
T ss_pred CEEEEEECCC-----CEEEEecCce---EEEEeccCc----ccEEEEEEcCCCe-EEEccCCC------eEEEEECCchh
Confidence 4666666654 5778884332 222222111 1233334445667 66666443 23444433221
Q ss_pred eEEEEECCCCCCCCcceeeEEEeCCEEEEEcCcCCCCCccccCCcEEEEECCCCeEEEc
Q 002047 320 RWEWAIAPGVSPSPRYQHAAVFVNARLHVSGGALGGGRMVEDSSSVAVLDTAAGVWCDT 378 (975)
Q Consensus 320 ~W~w~~~~g~~P~~R~~hs~v~~~~~L~V~GG~~~~~~~~~~~~dv~~yD~~t~~W~~v 378 (975)
....... ....-.++++..+..++.|+.+ ..|.+||+.+.+....
T Consensus 217 ~~~~~~~-----~~~~i~~~~~~~~~~l~~~~~d---------g~v~iwd~~~~~~~~~ 261 (313)
T 3odt_A 217 VLRTYEG-----HESFVYCIKLLPNGDIVSCGED---------RTVRIWSKENGSLKQV 261 (313)
T ss_dssp EEEEEEC-----CSSCEEEEEECTTSCEEEEETT---------SEEEEECTTTCCEEEE
T ss_pred hhhhhhc-----CCceEEEEEEecCCCEEEEecC---------CEEEEEECCCCceeEE
Confidence 1111111 1111223344433245566642 3488999988865443
No 235
>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}
Probab=58.53 E-value=1.9e+02 Score=30.65 Aligned_cols=176 Identities=11% Similarity=0.140 Sum_probs=84.6
Q ss_pred CCcEEEecCCCCCCCCccceEEEEe-CCEEEEEeccCCCCCccccEEEEEcCCCCCcEEEEEecCCCCCCCcccEEEEeC
Q 002047 159 TNKWSRITPFGEPPTPRAAHVATAV-GTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGPRYGHVMALVG 237 (975)
Q Consensus 159 t~~W~~l~~~g~~P~pR~~hsa~~~-~~~iyv~GG~~~~~~~~~dv~~yD~~t~~~~W~~v~~~g~~P~~R~~h~~~~~~ 237 (975)
-.+|+.+......| -..+.++.. ++.+|+.|.. ..+++-+-.-. .|+.+.. +....-+.++...
T Consensus 108 G~tW~~~~~~~~~~--~~~~~i~~~~~~~~~~~~~~-------g~v~~S~DgG~--tW~~~~~----~~~~~~~~~~~~~ 172 (327)
T 2xbg_A 108 GQSWSQIPLDPKLP--GSPRLIKALGNGSAEMITNV-------GAIYRTKDSGK--NWQALVQ----EAIGVMRNLNRSP 172 (327)
T ss_dssp TSSCEECCCCTTCS--SCEEEEEEEETTEEEEEETT-------CCEEEESSTTS--SEEEEEC----SCCCCEEEEEECT
T ss_pred CCCceECccccCCC--CCeEEEEEECCCCEEEEeCC-------ccEEEEcCCCC--CCEEeec----CCCcceEEEEEcC
Confidence 46799886431112 122334433 5688887642 12443221222 4999862 2222334554444
Q ss_pred CcEEEEEcCCCCCCCCCcEEEEECC-CCCcEEEEccCCCCCCCCcceeEEEEEeCCeEEEecCCCCCCCCccceEEeecC
Q 002047 238 QRYLMAIGGNDGKRPLADVWALDTA-AKPYEWRKLEPEGEGPPPCMYATASARSDGLLLLCGGRDASSVPLASAYGLAKH 316 (975)
Q Consensus 238 ~~~lyV~GG~~g~~~~ndv~~yDl~-s~~~~W~~v~~~~~~P~~r~~~~a~~~~~g~lyvfGG~~~~~~~l~d~~~~~~~ 316 (975)
++.+|++|- .+ .+++-+-. -. .|+.+... .....+..+...++.+|+.+.. + .++...
T Consensus 173 ~~~~~~~g~-~G-----~~~~S~d~gG~--tW~~~~~~----~~~~~~~~~~~~~g~~~~~~~~---G----~~~~s~-- 231 (327)
T 2xbg_A 173 SGEYVAVSS-RG-----SFYSTWEPGQT--AWEPHNRT----TSRRLHNMGFTPDGRLWMIVNG---G----KIAFSD-- 231 (327)
T ss_dssp TSCEEEEET-TS-----SEEEEECTTCS--SCEEEECC----SSSCEEEEEECTTSCEEEEETT---T----EEEEEE--
T ss_pred CCcEEEEEC-CC-----cEEEEeCCCCC--ceeECCCC----CCCccceeEECCCCCEEEEeCC---c----eEEEec--
Confidence 546666652 22 35555432 35 89887432 1233444444457788887642 1 122221
Q ss_pred CCCeEEEEECCCC-CCCCcceeeEEEe-CCEEEEEcCcCCCCCccccCCcEEEEECCCCeEEEccc
Q 002047 317 RDGRWEWAIAPGV-SPSPRYQHAAVFV-NARLHVSGGALGGGRMVEDSSSVAVLDTAAGVWCDTKS 380 (975)
Q Consensus 317 ~~~~W~w~~~~g~-~P~~R~~hs~v~~-~~~L~V~GG~~~~~~~~~~~~dv~~yD~~t~~W~~v~~ 380 (975)
.++--+|...... .+.....++++.. ++.+|++|+. ..+++-.-.-.+|+.+..
T Consensus 232 ~D~G~tW~~~~~~~~~~~~~~~~v~~~~~~~~~~~g~~----------g~i~~S~DgG~tW~~~~~ 287 (327)
T 2xbg_A 232 PDNSENWGELLSPLRRNSVGFLDLAYRTPNEVWLAGGA----------GALLCSQDGGQTWQQDVD 287 (327)
T ss_dssp TTEEEEECCCBCTTSSCCSCEEEEEESSSSCEEEEEST----------TCEEEESSTTSSCEECGG
T ss_pred CCCCCeeEeccCCcccCCcceEEEEecCCCEEEEEeCC----------CeEEEeCCCCcccEEcCc
Confidence 1211245544321 1222223444444 5678888762 124443334578998764
No 236
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=57.66 E-value=2.2e+02 Score=31.13 Aligned_cols=147 Identities=13% Similarity=0.095 Sum_probs=71.9
Q ss_pred CEEEEEeccCCCCCccccEEEEEcCCCCCcEEEEEecCCCCCCCcccEEEEeCCcEEEEEcCCCCCCCCCcEEEEECCCC
Q 002047 185 TMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGPRYGHVMALVGQRYLMAIGGNDGKRPLADVWALDTAAK 264 (975)
Q Consensus 185 ~~iyv~GG~~~~~~~~~dv~~yD~~t~~~~W~~v~~~g~~P~~R~~h~~~~~~~~~lyV~GG~~g~~~~ndv~~yDl~s~ 264 (975)
+.+++.|+. ...+.+||+.+.. .+... . .....-.+++...++..++.|+.++ .+..||+.+.
T Consensus 280 ~~~l~~~~~------d~~i~vwd~~~~~----~~~~~-~-~~~~~v~~~~~~~~~~~l~sg~~dg-----~i~vwd~~~~ 342 (464)
T 3v7d_B 280 GNIVVSGSY------DNTLIVWDVAQMK----CLYIL-S-GHTDRIYSTIYDHERKRCISASMDT-----TIRIWDLENG 342 (464)
T ss_dssp TTEEEEEET------TSCEEEEETTTTE----EEEEE-C-CCSSCEEEEEEETTTTEEEEEETTS-----CEEEEETTTT
T ss_pred CCEEEEEeC------CCeEEEEECCCCc----EEEEe-c-CCCCCEEEEEEcCCCCEEEEEeCCC-----cEEEEECCCC
Confidence 445555554 3469999998753 22211 1 1111122333333335667777664 5889999877
Q ss_pred CcEEEEccCCCCCCCCcceeEEEEEeCCeEEEecCCCCCCCCccceEEeecCCCCeEEEEECCCCCCCCcceeeEEEeCC
Q 002047 265 PYEWRKLEPEGEGPPPCMYATASARSDGLLLLCGGRDASSVPLASAYGLAKHRDGRWEWAIAPGVSPSPRYQHAAVFVNA 344 (975)
Q Consensus 265 ~~~W~~v~~~~~~P~~r~~~~a~~~~~g~lyvfGG~~~~~~~l~d~~~~~~~~~~~W~w~~~~g~~P~~R~~hs~v~~~~ 344 (975)
+-...-.... ..-.++.. .+..++.|+.++. +..++.... .-.+.... .......+...++
T Consensus 343 --~~~~~~~~h~-----~~v~~~~~-~~~~l~s~s~dg~------v~vwd~~~~-~~~~~~~~----~~~~~~~~~~~~~ 403 (464)
T 3v7d_B 343 --ELMYTLQGHT-----ALVGLLRL-SDKFLVSAAADGS------IRGWDANDY-SRKFSYHH----TNLSAITTFYVSD 403 (464)
T ss_dssp --EEEEEECCCS-----SCEEEEEE-CSSEEEEEETTSE------EEEEETTTC-CEEEEEEC----TTCCCEEEEEECS
T ss_pred --cEEEEEeCCC-----CcEEEEEE-cCCEEEEEeCCCc------EEEEECCCC-ceeeeecC----CCCccEEEEEeCC
Confidence 3222111111 11122333 4666777775532 333333322 11222111 1122233444567
Q ss_pred EEEEEcCcCCCCCccccCCcEEEEECCCCeEEE
Q 002047 345 RLHVSGGALGGGRMVEDSSSVAVLDTAAGVWCD 377 (975)
Q Consensus 345 ~L~V~GG~~~~~~~~~~~~dv~~yD~~t~~W~~ 377 (975)
.+++.|+ + ..+.+||+++++-..
T Consensus 404 ~~l~~~~-d---------g~i~iwd~~~g~~~~ 426 (464)
T 3v7d_B 404 NILVSGS-E---------NQFNIYNLRSGKLVH 426 (464)
T ss_dssp SEEEEEE-T---------TEEEEEETTTCCEEE
T ss_pred CEEEEec-C---------CeEEEEECCCCcEEe
Confidence 7777776 2 238899999987554
No 237
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=56.91 E-value=1.6e+02 Score=30.48 Aligned_cols=128 Identities=12% Similarity=0.088 Sum_probs=63.9
Q ss_pred EEEEeCCcEEEEEcCCCCCCCCCcEEEEECCCCCcEEEEccCCCCCCCCcceeEEEEEeCCeEEEecCCCCCCCCccceE
Q 002047 232 VMALVGQRYLMAIGGNDGKRPLADVWALDTAAKPYEWRKLEPEGEGPPPCMYATASARSDGLLLLCGGRDASSVPLASAY 311 (975)
Q Consensus 232 ~~~~~~~~~lyV~GG~~g~~~~ndv~~yDl~s~~~~W~~v~~~~~~P~~r~~~~a~~~~~g~lyvfGG~~~~~~~l~d~~ 311 (975)
+.+.-.++.||+.+..+ ..+++||+.+. ++..+..... ..-...+...++++|+....+.. ....++
T Consensus 49 ~~~~~~~g~l~~~~~~~-----~~i~~~d~~~~--~~~~~~~~~~----~~~~~i~~~~dg~l~v~~~~~~~--~~~~i~ 115 (333)
T 2dg1_A 49 GLNFDRQGQLFLLDVFE-----GNIFKINPETK--EIKRPFVSHK----ANPAAIKIHKDGRLFVCYLGDFK--STGGIF 115 (333)
T ss_dssp EEEECTTSCEEEEETTT-----CEEEEECTTTC--CEEEEEECSS----SSEEEEEECTTSCEEEEECTTSS--SCCEEE
T ss_pred CcEECCCCCEEEEECCC-----CEEEEEeCCCC--cEEEEeeCCC----CCcceEEECCCCcEEEEeCCCCC--CCceEE
Confidence 34444455788876543 47999999888 6655432111 12222333357788887543211 123567
Q ss_pred EeecCCCCeEEEEECCCCCCCCcceeeEEEe-CCEEEEEcCcCCCCCccccCCcEEEEECCCCeEEEc
Q 002047 312 GLAKHRDGRWEWAIAPGVSPSPRYQHAAVFV-NARLHVSGGALGGGRMVEDSSSVAVLDTAAGVWCDT 378 (975)
Q Consensus 312 ~~~~~~~~~W~w~~~~g~~P~~R~~hs~v~~-~~~L~V~GG~~~~~~~~~~~~dv~~yD~~t~~W~~v 378 (975)
.++.... ........ . .....-..+++. ++++|+........ .....||+||+++.+...+
T Consensus 116 ~~d~~~~-~~~~~~~~-~-~~~~~~~~i~~d~~g~l~v~~~~~~~~---~~~~~l~~~~~~~~~~~~~ 177 (333)
T 2dg1_A 116 AATENGD-NLQDIIED-L-STAYCIDDMVFDSKGGFYFTDFRGYST---NPLGGVYYVSPDFRTVTPI 177 (333)
T ss_dssp EECTTSC-SCEEEECS-S-SSCCCEEEEEECTTSCEEEEECCCBTT---BCCEEEEEECTTSCCEEEE
T ss_pred EEeCCCC-EEEEEEcc-C-ccCCcccceEECCCCCEEEEecccccc---CCCceEEEEeCCCCEEEEe
Confidence 7765433 22211111 1 111122223333 56788754321110 1135699999988776554
No 238
>2z06_A Putative uncharacterized protein TTHA0625; metal binding protein, structural genomics, NPPSFA; 2.20A {Thermus thermophilus} SCOP: d.159.1.10 PDB: 2cv9_A
Probab=56.71 E-value=11 Score=39.53 Aligned_cols=67 Identities=12% Similarity=0.034 Sum_probs=44.3
Q ss_pred CCEEEEecCCCCH--HHHHHHHHHhCCCCCCCCccceeEEE-eccccCCCCChHHHHHHHHHhhhcCCCCEEEEeccccc
Q 002047 698 APIKIFGDLHGQF--GDLMRLFDEYGSPSTAGDIAYIDYLF-LGDYVDRGQHSLETITLLLALKVEYPNNVHLIRGNHEA 774 (975)
Q Consensus 698 ~~i~vvGDiHG~~--~~L~~ll~~~g~~~~~~~~~~~~~vf-LGDyVDRG~~s~evl~ll~~lk~~~P~~v~llrGNHE~ 774 (975)
++|.++|||=|.- ..+..+|..+.-.. + -+|+ -||....-..+.+....|..+.. .+. -.||||.
T Consensus 1 m~ilfiGDi~g~~G~~~v~~~l~~lr~~~-d------~vi~ngen~~~G~g~~~~~~~~l~~~G~----D~~-T~GNHef 68 (252)
T 2z06_A 1 MRVLFIGDVMAEPGLRAVGLHLPDIRDRY-D------LVIANGENAARGKGLDRRSYRLLREAGV----DLV-SLGNHAW 68 (252)
T ss_dssp CEEEEECCBCHHHHHHHHHHHHHHHGGGC-S------EEEEECTTTTTTSSCCHHHHHHHHHHTC----CEE-ECCTTTT
T ss_pred CEEEEEEecCCcccHHHHHHHHHHHHhhC-C------EEEEeCCCccCCCCcCHHHHHHHHhCCC----CEE-EeccEee
Confidence 5789999997764 56677777764322 1 3444 56665544467788888888753 444 5599998
Q ss_pred cc
Q 002047 775 AD 776 (975)
Q Consensus 775 ~~ 776 (975)
-.
T Consensus 69 D~ 70 (252)
T 2z06_A 69 DH 70 (252)
T ss_dssp SC
T ss_pred EC
Confidence 54
No 239
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=56.57 E-value=1.7e+02 Score=29.64 Aligned_cols=94 Identities=19% Similarity=0.186 Sum_probs=44.0
Q ss_pred CcEEEEECCCCcEEEecCCCCCCCCccceEEEEeCCEEEEEeccCCCCCccccEEEEEcCCCCCcEEEEEecCCCCCCCc
Q 002047 150 ADVHCYDVLTNKWSRITPFGEPPTPRAAHVATAVGTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGPRY 229 (975)
Q Consensus 150 ~dv~~yD~~t~~W~~l~~~g~~P~pR~~hsa~~~~~~iyv~GG~~~~~~~~~dv~~yD~~t~~~~W~~v~~~g~~P~~R~ 229 (975)
..+..+|..+++-...... ... ...+....+.+++.|+. ...+..++..... .......+ ....
T Consensus 89 g~v~iw~~~~~~~~~~~~~---h~~--~~~~~~~~~~~l~s~~~------~~~~~~~~~~~~~--~~~~~~~~---~~~~ 152 (318)
T 4ggc_A 89 AEVQLWDVQQQKRLRNMTS---HSA--RVGSLSWNSYILSSGSR------SGHIHHHDVRVAE--HHVATLSG---HSQE 152 (318)
T ss_dssp SEEEEEETTTTEEEEEEEC---CSS--CEEEEEEETTEEEEEET------TSEEEEEETTSSS--CEEEEEEC---CSSC
T ss_pred CcEEEeecCCceeEEEecC---ccc--eEEEeecCCCEEEEEec------CCceEeeecCCCc--eeEEEEcC---ccCc
Confidence 3677889888764333221 111 12233334455555553 2345666665542 11111111 1111
Q ss_pred ccEEEEeCCcEEEEEcCCCCCCCCCcEEEEECCCC
Q 002047 230 GHVMALVGQRYLMAIGGNDGKRPLADVWALDTAAK 264 (975)
Q Consensus 230 ~h~~~~~~~~~lyV~GG~~g~~~~ndv~~yDl~s~ 264 (975)
-.......++.+++.|+.++ .+..||+.+.
T Consensus 153 ~~~~~~~~~~~~l~s~~~d~-----~i~iwd~~~~ 182 (318)
T 4ggc_A 153 VCGLRWAPDGRHLASGGNDN-----LVNVWPSAPG 182 (318)
T ss_dssp EEEEEECTTSSEEEEEETTS-----CEEEEESSCB
T ss_pred eEEEEEcCCCCEEEEEecCc-----ceeEEECCCC
Confidence 22222333335666676654 5777888764
No 240
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=56.38 E-value=1.7e+02 Score=29.46 Aligned_cols=181 Identities=9% Similarity=-0.050 Sum_probs=90.6
Q ss_pred CcEEEEECCCCcEEEecCCCCCCCCccceEEEEe-CCEEEEEeccCCCCCccccEEEEEcCCCCCcEEEEEecCCCCCCC
Q 002047 150 ADVHCYDVLTNKWSRITPFGEPPTPRAAHVATAV-GTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGPR 228 (975)
Q Consensus 150 ~dv~~yD~~t~~W~~l~~~g~~P~pR~~hsa~~~-~~~iyv~GG~~~~~~~~~dv~~yD~~t~~~~W~~v~~~g~~P~~R 228 (975)
+.+.+||+. .+...+.... ....-++++.. ++.+|+.... ...+++||.. . ++......+ ...
T Consensus 41 ~~v~~~~~~-~~~~~~~~~~---~~~~~~~i~~~~~g~l~v~~~~------~~~v~~~d~~-g--~~~~~~~~~---~~~ 104 (300)
T 2qc5_A 41 NKISSLDQS-GRIKEFEVPT---PDAKVMCLIVSSLGDIWFTENG------ANKIGKLSKK-G--GFTEYPLPQ---PDS 104 (300)
T ss_dssp TEEEEECTT-SCEEEEECSS---TTCCEEEEEECTTSCEEEEETT------TTEEEEECTT-S--CEEEEECSS---TTC
T ss_pred CeEEEECCC-CceEEEECCC---CCCcceeEEECCCCCEEEEecC------CCeEEEECCC-C--CeEEecCCC---CCC
Confidence 367888888 6666543211 11223344444 3477776432 2468899987 3 365443211 112
Q ss_pred cccEEEEeCCcEEEEEcCCCCCCCCCcEEEEECCCCCcEEEEccCCCCCCCCcceeEEEEEeCCeEEEecCCCCCCCCcc
Q 002047 229 YGHVMALVGQRYLMAIGGNDGKRPLADVWALDTAAKPYEWRKLEPEGEGPPPCMYATASARSDGLLLLCGGRDASSVPLA 308 (975)
Q Consensus 229 ~~h~~~~~~~~~lyV~GG~~g~~~~ndv~~yDl~s~~~~W~~v~~~~~~P~~r~~~~a~~~~~g~lyvfGG~~~~~~~l~ 308 (975)
.-+.++.-.++.+|+....+ +.+++||+. . +......... ...-...+...++++|+.... ..
T Consensus 105 ~~~~i~~~~~g~l~v~~~~~-----~~i~~~~~~-g--~~~~~~~~~~---~~~~~~i~~d~~g~l~v~~~~------~~ 167 (300)
T 2qc5_A 105 GPYGITEGLNGDIWFTQLNG-----DRIGKLTAD-G--TIYEYDLPNK---GSYPAFITLGSDNALWFTENQ------NN 167 (300)
T ss_dssp CEEEEEECSTTCEEEEETTT-----TEEEEECTT-S--CEEEEECSST---TCCEEEEEECTTSSEEEEETT------TT
T ss_pred CCccceECCCCCEEEEccCC-----CeEEEECCC-C--CEEEccCCCC---CCCceeEEECCCCCEEEEecC------CC
Confidence 23444444445788865322 468999997 5 3433321111 011222223346778886431 13
Q ss_pred ceEEeecCCCCeEEEEECCCCCCCCcceeeEEEe-CCEEEEEcCcCCCCCccccCCcEEEEECCCCeEEEc
Q 002047 309 SAYGLAKHRDGRWEWAIAPGVSPSPRYQHAAVFV-NARLHVSGGALGGGRMVEDSSSVAVLDTAAGVWCDT 378 (975)
Q Consensus 309 d~~~~~~~~~~~W~w~~~~g~~P~~R~~hs~v~~-~~~L~V~GG~~~~~~~~~~~~dv~~yD~~t~~W~~v 378 (975)
.++.++. ++.+.....+.. ...-.++++. ++.|||.... .+.|++||+ +.++..+
T Consensus 168 ~i~~~~~--~g~~~~~~~~~~---~~~~~~i~~d~~g~l~v~~~~---------~~~i~~~~~-~g~~~~~ 223 (300)
T 2qc5_A 168 SIGRITN--TGKLEEYPLPTN---AAAPVGITSGNDGALWFVEIM---------GNKIGRITT-TGEISEY 223 (300)
T ss_dssp EEEEECT--TCCEEEEECSST---TCCEEEEEECTTSSEEEEETT---------TTEEEEECT-TCCEEEE
T ss_pred eEEEECC--CCcEEEeeCCCC---CCCcceEEECCCCCEEEEccC---------CCEEEEEcC-CCcEEEE
Confidence 4666765 344443333211 1112233333 4678876421 235899998 6666554
No 241
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=56.27 E-value=1.8e+02 Score=29.70 Aligned_cols=88 Identities=9% Similarity=0.041 Sum_probs=45.0
Q ss_pred ccEEEEEcCCCCCcEEEEEecCCCCCCCcccEEEEeCC-cEEEEEcCCCCCCCCCcEEEEECCCCCcEEEEc-cCCCCCC
Q 002047 201 EDLHVLDLTQQRPRWHRVVVQGPGPGPRYGHVMALVGQ-RYLMAIGGNDGKRPLADVWALDTAAKPYEWRKL-EPEGEGP 278 (975)
Q Consensus 201 ~dv~~yD~~t~~~~W~~v~~~g~~P~~R~~h~~~~~~~-~~lyV~GG~~g~~~~ndv~~yDl~s~~~~W~~v-~~~~~~P 278 (975)
..+++||+.+.. +..+...........-++++...+ +.|||.... +.+++||+. . +...+ .......
T Consensus 46 ~~i~~~d~~~g~--~~~~~~~~~~~~~~~~~~i~~~~~~g~l~v~~~~------~~l~~~d~~-g--~~~~~~~~~~~~~ 114 (314)
T 1pjx_A 46 GEILRIDLKTGK--KTVICKPEVNGYGGIPAGCQCDRDANQLFVADMR------LGLLVVQTD-G--TFEEIAKKDSEGR 114 (314)
T ss_dssp CEEEEECTTTCC--EEEEECCEETTEECCEEEEEECSSSSEEEEEETT------TEEEEEETT-S--CEEECCSBCTTSC
T ss_pred CEEEEEeCCCCc--EEEEEecccCCCCCCCceEEEecCCCcEEEEECC------CCEEEEeCC-C--CEEEEEeccCCCc
Confidence 468999987754 665542000001111234444344 578887642 369999998 6 55555 3221111
Q ss_pred CCcceeEEEEEeCCeEEEecC
Q 002047 279 PPCMYATASARSDGLLLLCGG 299 (975)
Q Consensus 279 ~~r~~~~a~~~~~g~lyvfGG 299 (975)
....-+..+...++++|+...
T Consensus 115 ~~~~~~~i~~d~~g~l~v~~~ 135 (314)
T 1pjx_A 115 RMQGCNDCAFDYEGNLWITAP 135 (314)
T ss_dssp BCBCCCEEEECTTSCEEEEEC
T ss_pred cccCCcCEEECCCCCEEEEec
Confidence 111222333445778888654
No 242
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=55.79 E-value=1.8e+02 Score=29.69 Aligned_cols=48 Identities=23% Similarity=0.203 Sum_probs=29.1
Q ss_pred CcEEEEECCCCcEEEecCCCCCCCCccceEEEEe-C-CEEEEEeccCCCCCccccEEEEEcCCC
Q 002047 150 ADVHCYDVLTNKWSRITPFGEPPTPRAAHVATAV-G-TMVVIQGGIGPAGLSAEDLHVLDLTQQ 211 (975)
Q Consensus 150 ~dv~~yD~~t~~W~~l~~~g~~P~pR~~hsa~~~-~-~~iyv~GG~~~~~~~~~dv~~yD~~t~ 211 (975)
+.++.||+.+.+....-..+ ..-+.++.. + +.||+.+ .++++||+.+.
T Consensus 115 ~~i~v~d~~~~~~~~~~~~~-----~~~~~~~~s~dg~~l~~~~---------~~i~~~d~~~~ 164 (337)
T 1pby_B 115 TRVALYDAETLSRRKAFEAP-----RQITMLAWARDGSKLYGLG---------RDLHVMDPEAG 164 (337)
T ss_dssp CEEEEEETTTTEEEEEEECC-----SSCCCEEECTTSSCEEEES---------SSEEEEETTTT
T ss_pred ceEEEEECCCCcEEEEEeCC-----CCcceeEECCCCCEEEEeC---------CeEEEEECCCC
Confidence 58999999887765443322 112233333 3 3566652 46999999875
No 243
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=55.66 E-value=2.3e+02 Score=33.35 Aligned_cols=97 Identities=13% Similarity=0.137 Sum_probs=47.4
Q ss_pred EEEEEeccCCCCCccccEEEEEcCCCCCcEEEE--EecCCCCCCCcccEEEEeCCcEEEEEcCCCCCCCCCcEEEEECCC
Q 002047 186 MVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRV--VVQGPGPGPRYGHVMALVGQRYLMAIGGNDGKRPLADVWALDTAA 263 (975)
Q Consensus 186 ~iyv~GG~~~~~~~~~dv~~yD~~t~~~~W~~v--~~~g~~P~~R~~h~~~~~~~~~lyV~GG~~g~~~~ndv~~yDl~s 263 (975)
.+++.|+. ...+.+||+.+....+... ...+ ....-.+++...++.+++.|+.++ .|.++|+.+
T Consensus 396 ~~l~s~s~------D~~i~~W~~~~~~~~~~~~~~~~~~---h~~~v~~v~~s~~g~~l~sgs~Dg-----~v~vwd~~~ 461 (694)
T 3dm0_A 396 DIIVSASR------DKSIILWKLTKDDKAYGVAQRRLTG---HSHFVEDVVLSSDGQFALSGSWDG-----ELRLWDLAA 461 (694)
T ss_dssp SEEEEEET------TSEEEEEECCCSTTCSCEEEEEEEC---CSSCEEEEEECTTSSEEEEEETTS-----EEEEEETTT
T ss_pred CEEEEEeC------CCcEEEEEccCCCcccccccceecC---CCCcEEEEEECCCCCEEEEEeCCC-----cEEEEECCC
Confidence 56677764 3568888887642122111 1111 111112233333446777777664 688899987
Q ss_pred CCcEEEEccCCCCCCCCcceeEEEEEeCCeEEEecCCCC
Q 002047 264 KPYEWRKLEPEGEGPPPCMYATASARSDGLLLLCGGRDA 302 (975)
Q Consensus 264 ~~~~W~~v~~~~~~P~~r~~~~a~~~~~g~lyvfGG~~~ 302 (975)
. +-...-.... ....+.+...++..++.|+.++
T Consensus 462 ~--~~~~~~~~h~----~~v~~~~~s~~~~~l~s~s~D~ 494 (694)
T 3dm0_A 462 G--VSTRRFVGHT----KDVLSVAFSLDNRQIVSASRDR 494 (694)
T ss_dssp T--EEEEEEECCS----SCEEEEEECTTSSCEEEEETTS
T ss_pred C--cceeEEeCCC----CCEEEEEEeCCCCEEEEEeCCC
Confidence 6 3322111111 1112222334666777777654
No 244
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=55.35 E-value=67 Score=38.89 Aligned_cols=129 Identities=10% Similarity=0.077 Sum_probs=72.1
Q ss_pred CcEEEEECCCCcEEEecCCCCCCCCccceEEEEe-CCEEEEEeccCCCCCccccE-EEEEcCCCCCcEEEEEecCCCCCC
Q 002047 150 ADVHCYDVLTNKWSRITPFGEPPTPRAAHVATAV-GTMVVIQGGIGPAGLSAEDL-HVLDLTQQRPRWHRVVVQGPGPGP 227 (975)
Q Consensus 150 ~dv~~yD~~t~~W~~l~~~g~~P~pR~~hsa~~~-~~~iyv~GG~~~~~~~~~dv-~~yD~~t~~~~W~~v~~~g~~P~~ 227 (975)
.-+++||+.+.+++........|... -.+++.. ++.|++... +-+ ++||..+.. +........+|..
T Consensus 515 ~Gl~~~~~~~~~~~~~~~~~~l~~~~-i~~i~~d~~g~lWi~T~--------~Glv~~~d~~~~~--~~~~~~~~gl~~~ 583 (781)
T 3v9f_A 515 GGVGIYTPDMQLVRKFNQYEGFCSNT-INQIYRSSKGQMWLATG--------EGLVCFPSARNFD--YQVFQRKEGLPNT 583 (781)
T ss_dssp SCEEEECTTCCEEEEECTTTTCSCSC-EEEEEECTTSCEEEEET--------TEEEEESCTTTCC--CEEECGGGTCSCC
T ss_pred CCEEEEeCCCCeEEEccCCCCCCCCe-eEEEEECCCCCEEEEEC--------CCceEEECCCCCc--EEEccccCCCCCc
Confidence 56889999999988876432122211 1222222 346666532 235 888887764 6666544445544
Q ss_pred CcccEEEEeCCcEEEEEcCCCCCCCCCcEEEEECCCCCcEEEEccCCCCCCCCcceeEEEE-EeCCeEEEecCC
Q 002047 228 RYGHVMALVGQRYLMAIGGNDGKRPLADVWALDTAAKPYEWRKLEPEGEGPPPCMYATASA-RSDGLLLLCGGR 300 (975)
Q Consensus 228 R~~h~~~~~~~~~lyV~GG~~g~~~~ndv~~yDl~s~~~~W~~v~~~~~~P~~r~~~~a~~-~~~g~lyvfGG~ 300 (975)
.. .+++.-.++.||+.+. +-+.+||+.+. ++.........+.......++. ..+|.||+ ||.
T Consensus 584 ~i-~~i~~d~~g~lW~~t~-------~Gl~~~~~~~~--~~~~~~~~dGl~~~~f~~~~~~~~~~G~l~~-g~~ 646 (781)
T 3v9f_A 584 HI-RAISEDKNGNIWASTN-------TGISCYITSKK--CFYTYDHSNNIPQGSFISGCVTKDHNGLIYF-GSI 646 (781)
T ss_dssp CC-CEEEECSSSCEEEECS-------SCEEEEETTTT--EEEEECGGGTCCSSCEEEEEEEECTTSCEEE-EET
T ss_pred eE-EEEEECCCCCEEEEcC-------CceEEEECCCC--ceEEecccCCccccccccCceEECCCCEEEE-ECC
Confidence 43 3454444557887652 34899999988 7777644332232223223333 34667666 443
No 245
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=54.52 E-value=37 Score=35.81 Aligned_cols=30 Identities=20% Similarity=0.355 Sum_probs=19.6
Q ss_pred CCEEEEEcCcCCCCCccccCCcEEEEECC-CCeEEEcccC
Q 002047 343 NARLHVSGGALGGGRMVEDSSSVAVLDTA-AGVWCDTKSV 381 (975)
Q Consensus 343 ~~~L~V~GG~~~~~~~~~~~~dv~~yD~~-t~~W~~v~~~ 381 (975)
++.+++.||.++. |.+|+.. ...|..+..+
T Consensus 273 ~g~~las~~~D~~---------v~lw~~~~~g~~~~~~~~ 303 (316)
T 3bg1_A 273 TANILAVSGGDNK---------VTLWKESVDGQWVCISDV 303 (316)
T ss_dssp TTCCEEEEESSSC---------EEEEEECTTSCEEEEEEC
T ss_pred CCCEEEEEcCCCe---------EEEEEECCCCcEEEeeec
Confidence 4677777776432 5556654 4689888776
No 246
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=54.37 E-value=2.3e+02 Score=30.32 Aligned_cols=147 Identities=7% Similarity=-0.031 Sum_probs=67.0
Q ss_pred cccEEEEEcCCCCCcEEEEEecCCCCCCCcccEEEEeCCcEEEEEcCCCCCCCCCcEEEEECCCCCcEEEEccCCCCCCC
Q 002047 200 AEDLHVLDLTQQRPRWHRVVVQGPGPGPRYGHVMALVGQRYLMAIGGNDGKRPLADVWALDTAAKPYEWRKLEPEGEGPP 279 (975)
Q Consensus 200 ~~dv~~yD~~t~~~~W~~v~~~g~~P~~R~~h~~~~~~~~~lyV~GG~~g~~~~ndv~~yDl~s~~~~W~~v~~~~~~P~ 279 (975)
...+.++|+.+... -..+... ..-.+++.-.++++++.|+. +.+.+++..+. .......... .
T Consensus 156 d~~i~iwd~~~~~~-~~~~~~~------~~V~~v~fspdg~~l~s~s~------~~~~~~~~~~~--~~~~~~~~~~--~ 218 (365)
T 4h5i_A 156 PAIMRIIDPSDLTE-KFEIETR------GEVKDLHFSTDGKVVAYITG------SSLEVISTVTG--SCIARKTDFD--K 218 (365)
T ss_dssp SCEEEEEETTTTEE-EEEEECS------SCCCEEEECTTSSEEEEECS------SCEEEEETTTC--CEEEEECCCC--T
T ss_pred CCEEEEeECCCCcE-EEEeCCC------CceEEEEEccCCceEEeccc------eeEEEEEeccC--cceeeeecCC--C
Confidence 35688999988631 1122211 11123333344456666542 34677777776 3322211111 0
Q ss_pred CcceeEEEEEeCCeEEEecCCCCCCCCccceEEeecCCCCeEEEEECCCCCCCCcceeeEEEe-CCEEEEEcCcCCCCCc
Q 002047 280 PCMYATASARSDGLLLLCGGRDASSVPLASAYGLAKHRDGRWEWAIAPGVSPSPRYQHAAVFV-NARLHVSGGALGGGRM 358 (975)
Q Consensus 280 ~r~~~~a~~~~~g~lyvfGG~~~~~~~l~d~~~~~~~~~~~W~w~~~~g~~P~~R~~hs~v~~-~~~L~V~GG~~~~~~~ 358 (975)
...........++..++.++.++... ..++.++.... .+..............-.++++. ++++++.|+.++
T Consensus 219 ~~~v~~v~fspdg~~l~~~s~d~~~~--~~i~~~~~~~~-~~~~~~~~~~~~~~~~V~~~~~Spdg~~lasgs~D~---- 291 (365)
T 4h5i_A 219 NWSLSKINFIADDTVLIAASLKKGKG--IVLTKISIKSG-NTSVLRSKQVTNRFKGITSMDVDMKGELAVLASNDN---- 291 (365)
T ss_dssp TEEEEEEEEEETTEEEEEEEESSSCC--EEEEEEEEETT-EEEEEEEEEEESSCSCEEEEEECTTSCEEEEEETTS----
T ss_pred CCCEEEEEEcCCCCEEEEEecCCcce--eEEeecccccc-eecceeeeeecCCCCCeEeEEECCCCCceEEEcCCC----
Confidence 01122333456788888777654432 12233322221 11111110000011111122222 678888888643
Q ss_pred cccCCcEEEEECCCCeE
Q 002047 359 VEDSSSVAVLDTAAGVW 375 (975)
Q Consensus 359 ~~~~~dv~~yD~~t~~W 375 (975)
.|.+||+.+.+-
T Consensus 292 -----~V~iwd~~~~~~ 303 (365)
T 4h5i_A 292 -----SIALVKLKDLSM 303 (365)
T ss_dssp -----CEEEEETTTTEE
T ss_pred -----EEEEEECCCCcE
Confidence 388999998764
No 247
>1t70_A Phosphatase; crystal, X-RAY crystallography, structural GENO berkeley structural genomics center, BSGC, PSI, protein STR initiative; 2.30A {Deinococcus radiodurans} SCOP: d.159.1.9
Probab=54.03 E-value=15 Score=38.48 Aligned_cols=66 Identities=15% Similarity=0.059 Sum_probs=42.8
Q ss_pred CCEEEEecCCCCH--HHHHHHHHHhCCCCCCCCccceeEEEeccccCCC-CChHHHHHHHHHhhhcCCCCEEEEeccccc
Q 002047 698 APIKIFGDLHGQF--GDLMRLFDEYGSPSTAGDIAYIDYLFLGDYVDRG-QHSLETITLLLALKVEYPNNVHLIRGNHEA 774 (975)
Q Consensus 698 ~~i~vvGDiHG~~--~~L~~ll~~~g~~~~~~~~~~~~~vfLGDyVDRG-~~s~evl~ll~~lk~~~P~~v~llrGNHE~ 774 (975)
++|.++|||=|.. ..+..++..+.-.. + -+|+-|+-.--| ..+.+....|..+.. .+.. .||||.
T Consensus 1 m~ilf~GDv~g~~G~~~~~~~l~~lr~~~-d------~vi~nge~~~~G~g~~~~~~~~l~~~G~----Da~T-lGNHef 68 (255)
T 1t70_A 1 MRVLFIGDVFGQPGRRVLQNHLPTIRPQF-D------FVIVNMENSAGGFGMHRDAARGALEAGA----GCLT-LGNHAW 68 (255)
T ss_dssp CEEEEECCBBHHHHHHHHHHHHHHHGGGC-S------EEEEECTBTTTTSSCCHHHHHHHHHHTC----SEEE-CCTTTT
T ss_pred CEEEEEeccCChHHHHHHHHHHHHHHhhC-C------EEEECCCCccCCcCCCHHHHHHHHhCCC----CEEE-eccccc
Confidence 5789999998876 45666777664221 1 455655555444 566778888887743 3444 499998
Q ss_pred c
Q 002047 775 A 775 (975)
Q Consensus 775 ~ 775 (975)
-
T Consensus 69 D 69 (255)
T 1t70_A 69 H 69 (255)
T ss_dssp S
T ss_pred c
Confidence 5
No 248
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=53.93 E-value=2.3e+02 Score=30.32 Aligned_cols=155 Identities=14% Similarity=0.050 Sum_probs=73.8
Q ss_pred CCEEEEEeccCCCCCccccEEEEEcCCCCCc------EEEEEecCCCCCCCcccEEEEeCCc-EEEEEcCCCCCCCCCcE
Q 002047 184 GTMVVIQGGIGPAGLSAEDLHVLDLTQQRPR------WHRVVVQGPGPGPRYGHVMALVGQR-YLMAIGGNDGKRPLADV 256 (975)
Q Consensus 184 ~~~iyv~GG~~~~~~~~~dv~~yD~~t~~~~------W~~v~~~g~~P~~R~~h~~~~~~~~-~lyV~GG~~g~~~~ndv 256 (975)
++.+++.|+. ...+.+||+.+.... -..+. + ....-.+++...++ .+++.|+.++ .+
T Consensus 93 ~~~~l~s~s~------dg~v~vw~~~~~~~~~~~~~~~~~~~--~---h~~~v~~~~~~p~~~~~l~s~~~dg-----~i 156 (402)
T 2aq5_A 93 NDNVIASGSE------DCTVMVWEIPDGGLVLPLREPVITLE--G---HTKRVGIVAWHPTAQNVLLSAGCDN-----VI 156 (402)
T ss_dssp CTTEEEEEET------TSEEEEEECCTTCCSSCBCSCSEEEE--C---CSSCEEEEEECSSBTTEEEEEETTS-----CE
T ss_pred CCCEEEEEeC------CCeEEEEEccCCCCccccCCceEEec--C---CCCeEEEEEECcCCCCEEEEEcCCC-----EE
Confidence 4567777764 356889998875210 11111 0 11111223333332 4777777664 58
Q ss_pred EEEECCCCCcEEEEcc--CCCCCCCCcceeEEEEEeCCeEEEecCCCCCCCCccceEEeecCCCCeEEEEECCCCCCCCc
Q 002047 257 WALDTAAKPYEWRKLE--PEGEGPPPCMYATASARSDGLLLLCGGRDASSVPLASAYGLAKHRDGRWEWAIAPGVSPSPR 334 (975)
Q Consensus 257 ~~yDl~s~~~~W~~v~--~~~~~P~~r~~~~a~~~~~g~lyvfGG~~~~~~~l~d~~~~~~~~~~~W~w~~~~g~~P~~R 334 (975)
..||+.+. +....- .... ..........++.+++.|+.++ .+..++.... .-......+. ...+
T Consensus 157 ~iwd~~~~--~~~~~~~~~~~~----~~v~~~~~~~~~~~l~~~~~d~------~i~iwd~~~~-~~~~~~~~~~-~~~~ 222 (402)
T 2aq5_A 157 LVWDVGTG--AAVLTLGPDVHP----DTIYSVDWSRDGALICTSCRDK------RVRVIEPRKG-TVVAEKDRPH-EGTR 222 (402)
T ss_dssp EEEETTTT--EEEEEECTTTCC----SCEEEEEECTTSSCEEEEETTS------EEEEEETTTT-EEEEEEECSS-CSSS
T ss_pred EEEECCCC--CccEEEecCCCC----CceEEEEECCCCCEEEEEecCC------cEEEEeCCCC-ceeeeeccCC-CCCc
Confidence 89999887 544332 1111 1222233334677777777543 2444443332 2222221111 1111
Q ss_pred ceeeEEEeCCEEEEEcCcCCCCCccccCCcEEEEECCCCe
Q 002047 335 YQHAAVFVNARLHVSGGALGGGRMVEDSSSVAVLDTAAGV 374 (975)
Q Consensus 335 ~~hs~v~~~~~L~V~GG~~~~~~~~~~~~dv~~yD~~t~~ 374 (975)
....+..-++.+++.|..... ...|.+||+.+..
T Consensus 223 ~~~~~~~~~~~~l~~g~~~~~------d~~i~iwd~~~~~ 256 (402)
T 2aq5_A 223 PVHAVFVSEGKILTTGFSRMS------ERQVALWDTKHLE 256 (402)
T ss_dssp CCEEEECSTTEEEEEEECTTC------CEEEEEEETTBCS
T ss_pred ceEEEEcCCCcEEEEeccCCC------CceEEEEcCcccc
Confidence 222222236777777631111 3458899988753
No 249
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=53.77 E-value=55 Score=37.79 Aligned_cols=183 Identities=14% Similarity=0.119 Sum_probs=86.9
Q ss_pred EEEEECCCCcEEEecCCCCCCCCccceEEEEeCCEEEEEeccCCCCCccccEEEEEcCCCCCcEEEEEecCCCCCCCccc
Q 002047 152 VHCYDVLTNKWSRITPFGEPPTPRAAHVATAVGTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGPRYGH 231 (975)
Q Consensus 152 v~~yD~~t~~W~~l~~~g~~P~pR~~hsa~~~~~~iyv~GG~~~~~~~~~dv~~yD~~t~~~~W~~v~~~g~~P~~R~~h 231 (975)
+..||+.+.+.+.+... +. ... +..-+++.+++++....+ ..++|++|+.+.. ++.+. ..+ ....
T Consensus 134 ~~l~d~~~g~~~~l~~~---~~--~~~-~~spDG~~la~~~~~~~~--~~~i~~~d~~~g~--~~~l~---~~~--~~~~ 198 (582)
T 3o4h_A 134 VALYALDGGGLRELARL---PG--FGF-VSDIRGDLIAGLGFFGGG--RVSLFTSNLSSGG--LRVFD---SGE--GSFS 198 (582)
T ss_dssp EEEEEEETTEEEEEEEE---SS--CEE-EEEEETTEEEEEEEEETT--EEEEEEEETTTCC--CEEEC---CSS--CEEE
T ss_pred ceEEEccCCcEEEeecC---CC--ceE-EECCCCCEEEEEEEcCCC--CeEEEEEcCCCCC--ceEee---cCC--Cccc
Confidence 34678888887777543 22 222 222244444444432111 2469999998764 66554 111 1112
Q ss_pred EEEEe-CCcEEEEEcCCCCCCCCCcEEEEECCCCCcEEEEccCCCCC---CCCcceeEEEEEeCCeEEEecCCCCCCCCc
Q 002047 232 VMALV-GQRYLMAIGGNDGKRPLADVWALDTAAKPYEWRKLEPEGEG---PPPCMYATASARSDGLLLLCGGRDASSVPL 307 (975)
Q Consensus 232 ~~~~~-~~~~lyV~GG~~g~~~~ndv~~yDl~s~~~~W~~v~~~~~~---P~~r~~~~a~~~~~g~lyvfGG~~~~~~~l 307 (975)
..+.- +++.|+ .+..++ ...++++|+.+. +...+...... +........+...++++|+.+..++.
T Consensus 199 ~~~~SpDG~~l~-~~~~~~---~~~i~~~d~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~~~~~~~~g~---- 268 (582)
T 3o4h_A 199 SASISPGMKVTA-GLETAR---EARLVTVDPRDG--SVEDLELPSKDFSSYRPTAITWLGYLPDGRLAVVARREGR---- 268 (582)
T ss_dssp EEEECTTSCEEE-EEECSS---CEEEEEECTTTC--CEEECCCSCSHHHHHCCSEEEEEEECTTSCEEEEEEETTE----
T ss_pred cceECCCCCEEE-EccCCC---eeEEEEEcCCCC--cEEEccCCCcChhhhhhccccceeEcCCCcEEEEEEcCCc----
Confidence 22233 343444 433332 257999999988 65533221110 00000001113446677776654432
Q ss_pred cceEEeecCCCCeEEEEECCCCCCCCcceeeEEEeCCEEEEEcCcCCCCCccccCCcEEEEECCCCeEEEc
Q 002047 308 ASAYGLAKHRDGRWEWAIAPGVSPSPRYQHAAVFVNARLHVSGGALGGGRMVEDSSSVAVLDTAAGVWCDT 378 (975)
Q Consensus 308 ~d~~~~~~~~~~~W~w~~~~g~~P~~R~~hs~v~~~~~L~V~GG~~~~~~~~~~~~dv~~yD~~t~~W~~v 378 (975)
..+|.+ ++. .. .+... -.+.++.++++++.++.... ...+|.+|+.+ +..++
T Consensus 269 ~~l~~~-----g~~--~~----~~~~~-v~~~~~sdg~~l~~~s~~~~------p~~l~~~d~~~-~~~~l 320 (582)
T 3o4h_A 269 SAVFID-----GER--VE----APQGN-HGRVVLWRGKLVTSHTSLST------PPRIVSLPSGE-PLLEG 320 (582)
T ss_dssp EEEEET-----TEE--EC----CCSSE-EEEEEEETTEEEEEEEETTE------EEEEEEETTCC-EEECC
T ss_pred EEEEEE-----CCe--ec----cCCCc-eEEEEecCCEEEEEEcCCCC------CCeEEEEcCCC-ceEEE
Confidence 223332 222 21 12221 22333338888777654322 35688998876 55544
No 250
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=53.41 E-value=3.3e+02 Score=31.91 Aligned_cols=182 Identities=12% Similarity=0.110 Sum_probs=82.3
Q ss_pred CcEEEEECCCCcEEEecCCCCCCCCccceEEEEe-CCEEEEEeccCCCCCccccEEEEEcCCCCCcEEEEEecCCCCCCC
Q 002047 150 ADVHCYDVLTNKWSRITPFGEPPTPRAAHVATAV-GTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGPR 228 (975)
Q Consensus 150 ~dv~~yD~~t~~W~~l~~~g~~P~pR~~hsa~~~-~~~iyv~GG~~~~~~~~~dv~~yD~~t~~~~W~~v~~~g~~P~~R 228 (975)
..+.++|+.+..-...-.. .. ..-.+++.. ++..++.|+. ...+.+||..... .+. +. ......+
T Consensus 452 g~v~vwd~~~~~~~~~~~~---h~-~~v~~~~~s~~~~~l~s~s~------D~~i~iwd~~~~~-~~~-~~--~~~~~h~ 517 (694)
T 3dm0_A 452 GELRLWDLAAGVSTRRFVG---HT-KDVLSVAFSLDNRQIVSASR------DRTIKLWNTLGEC-KYT-IS--EGGEGHR 517 (694)
T ss_dssp SEEEEEETTTTEEEEEEEC---CS-SCEEEEEECTTSSCEEEEET------TSCEEEECTTSCE-EEE-EC--SSTTSCS
T ss_pred CcEEEEECCCCcceeEEeC---CC-CCEEEEEEeCCCCEEEEEeC------CCEEEEEECCCCc-cee-ec--cCCCCCC
Confidence 4678888887653322111 01 111122222 3455666664 3568888876541 121 11 1111112
Q ss_pred cccEEEEeC-C--cEEEEEcCCCCCCCCCcEEEEECCCCCcEEEEccCCCCCCCCcceeEEEEEeCCeEEEecCCCCCCC
Q 002047 229 YGHVMALVG-Q--RYLMAIGGNDGKRPLADVWALDTAAKPYEWRKLEPEGEGPPPCMYATASARSDGLLLLCGGRDASSV 305 (975)
Q Consensus 229 ~~h~~~~~~-~--~~lyV~GG~~g~~~~ndv~~yDl~s~~~~W~~v~~~~~~P~~r~~~~a~~~~~g~lyvfGG~~~~~~ 305 (975)
..-.++.+. + ..+++.|+.++ .|.+||+.+. +-...-.... ....+.+...++.+++.||.++.-
T Consensus 518 ~~v~~~~~~~~~~~~~l~s~s~d~-----~v~vwd~~~~--~~~~~~~~h~----~~v~~v~~spdg~~l~sg~~Dg~i- 585 (694)
T 3dm0_A 518 DWVSCVRFSPNTLQPTIVSASWDK-----TVKVWNLSNC--KLRSTLAGHT----GYVSTVAVSPDGSLCASGGKDGVV- 585 (694)
T ss_dssp SCEEEEEECSCSSSCEEEEEETTS-----CEEEEETTTC--CEEEEECCCS----SCEEEEEECTTSSEEEEEETTSBC-
T ss_pred CcEEEEEEeCCCCcceEEEEeCCC-----eEEEEECCCC--cEEEEEcCCC----CCEEEEEEeCCCCEEEEEeCCCeE-
Confidence 222233332 2 13566676654 5888999876 3222111111 112223334467888888866432
Q ss_pred CccceEEeecCCCCeEEEEECCCCCCCCcceeeEEEeCCEEEEEcCcCCCCCccccCCcEEEEECCCCeEEE
Q 002047 306 PLASAYGLAKHRDGRWEWAIAPGVSPSPRYQHAAVFVNARLHVSGGALGGGRMVEDSSSVAVLDTAAGVWCD 377 (975)
Q Consensus 306 ~l~d~~~~~~~~~~~W~w~~~~g~~P~~R~~hs~v~~~~~L~V~GG~~~~~~~~~~~~dv~~yD~~t~~W~~ 377 (975)
..++.... . ...... ....-+++++..+..+++++. ...|.+||+++.+-..
T Consensus 586 -----~iwd~~~~-~--~~~~~~---~~~~v~~~~~sp~~~~l~~~~---------~~~i~iwd~~~~~~~~ 637 (694)
T 3dm0_A 586 -----LLWDLAEG-K--KLYSLE---ANSVIHALCFSPNRYWLCAAT---------EHGIKIWDLESKSIVE 637 (694)
T ss_dssp -----EEEETTTT-E--EEECCB---CSSCEEEEEECSSSSEEEEEE---------TTEEEEEETTTTEEEE
T ss_pred -----EEEECCCC-c--eEEEec---CCCcEEEEEEcCCCcEEEEEc---------CCCEEEEECCCCCChh
Confidence 22333222 1 111111 111234444544444444442 2338899998876543
No 251
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=53.14 E-value=1.3e+02 Score=31.20 Aligned_cols=96 Identities=9% Similarity=0.067 Sum_probs=47.5
Q ss_pred CEEEEEeccCCCCCccccEEEEEcCCCCCcEEEEEecCCCCCCCcccEEEEeCCcE-EEEEcCCCCCCCCCcEEEEEC-C
Q 002047 185 TMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGPRYGHVMALVGQRY-LMAIGGNDGKRPLADVWALDT-A 262 (975)
Q Consensus 185 ~~iyv~GG~~~~~~~~~dv~~yD~~t~~~~W~~v~~~g~~P~~R~~h~~~~~~~~~-lyV~GG~~g~~~~ndv~~yDl-~ 262 (975)
+.+++.|+. ...+.+||+.+........... .....-.+++...++. +++.|+.++ .+..||+ .
T Consensus 23 ~~~l~~~~~------d~~v~iw~~~~~~~~~~~~~~~---~~~~~v~~~~~~~~~~~~l~~~~~dg-----~i~~wd~~~ 88 (342)
T 1yfq_A 23 KSLLLITSW------DGSLTVYKFDIQAKNVDLLQSL---RYKHPLLCCNFIDNTDLQIYVGTVQG-----EILKVDLIG 88 (342)
T ss_dssp GTEEEEEET------TSEEEEEEEETTTTEEEEEEEE---ECSSCEEEEEEEESSSEEEEEEETTS-----CEEEECSSS
T ss_pred CCEEEEEcC------CCeEEEEEeCCCCccccceeee---ecCCceEEEEECCCCCcEEEEEcCCC-----eEEEEEecc
Confidence 445555553 3568888887653111111111 1111222333333346 677777654 6899999 8
Q ss_pred CCCcEEEEccC--CCCCCCCcceeEEEEEeCCeEEEecCCCC
Q 002047 263 AKPYEWRKLEP--EGEGPPPCMYATASARSDGLLLLCGGRDA 302 (975)
Q Consensus 263 s~~~~W~~v~~--~~~~P~~r~~~~a~~~~~g~lyvfGG~~~ 302 (975)
+. +...+.. ... ......... +.+++.|+.++
T Consensus 89 ~~--~~~~~~~~~~~~-----~v~~l~~~~-~~~l~s~~~d~ 122 (342)
T 1yfq_A 89 SP--SFQALTNNEANL-----GICRICKYG-DDKLIAASWDG 122 (342)
T ss_dssp SS--SEEECBSCCCCS-----CEEEEEEET-TTEEEEEETTS
T ss_pred CC--ceEeccccCCCC-----ceEEEEeCC-CCEEEEEcCCC
Confidence 77 5555543 211 112222223 66666666543
No 252
>3b7f_A Glycosyl hydrolase, BNR repeat; 7-bladed beta-propeller fold, structural genomics, joint CEN structural genomics, JCSG; 2.20A {Ralstonia eutropha}
Probab=51.04 E-value=2.7e+02 Score=30.15 Aligned_cols=195 Identities=11% Similarity=0.095 Sum_probs=94.3
Q ss_pred cEEEEECCC--CcEEEecCCCCCCCCccceEEEEe---CCEEEEEeccCCCCCccccEEEEEcCCCCCcEEEEEecCCCC
Q 002047 151 DVHCYDVLT--NKWSRITPFGEPPTPRAAHVATAV---GTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGP 225 (975)
Q Consensus 151 dv~~yD~~t--~~W~~l~~~g~~P~pR~~hsa~~~---~~~iyv~GG~~~~~~~~~dv~~yD~~t~~~~W~~v~~~g~~P 225 (975)
-+++|+... .+|+.+... +....-++++.. .+.||+.+..+..+ .-+++.+-... .|+.+......+
T Consensus 32 Gl~~~~~~~~g~~W~~~~~~---~~~~~v~~i~~dp~~~~~l~~g~~~g~~g---~gl~~s~D~G~--tW~~~~~~~~~~ 103 (394)
T 3b7f_A 32 GAWFLASDPARRTWELRGPV---FLGHTIHHIVQDPREPERMLMAARTGHLG---PTVFRSDDGGG--NWTEATRPPAFN 103 (394)
T ss_dssp EEEEEEECTTSCSEEEEEEE---STTSEEEEEEECSSSTTCEEEEEEC--CC---EEEEEESSTTS--CCEECSBCCCCC
T ss_pred ceEEEECCCCCCCceECCcc---CCCCceEEEEECCCCCCeEEEEecCCCCC---ccEEEeCCCCC--CceECCccccCC
Confidence 366777654 689987421 122334555554 35788765432111 24665543333 499875321122
Q ss_pred CC--C-----ccc--EEEEe--C-CcEEEEEcCCCCCCCCCcEEEEECCCCCcEEEEccCCCCCCC-------------C
Q 002047 226 GP--R-----YGH--VMALV--G-QRYLMAIGGNDGKRPLADVWALDTAAKPYEWRKLEPEGEGPP-------------P 280 (975)
Q Consensus 226 ~~--R-----~~h--~~~~~--~-~~~lyV~GG~~g~~~~ndv~~yDl~s~~~~W~~v~~~~~~P~-------------~ 280 (975)
.. + ..+ ++++. + .+.||+.+- ..-+++.+-... +|+.+......|. .
T Consensus 104 ~~~~~~~~~~~~~i~~l~~~~~~~~~~l~~g~~------~ggl~~S~DgG~--tW~~~~~~~~~p~~~~~~~~~~~g~~~ 175 (394)
T 3b7f_A 104 KAPEGETGRVVDHVFWLTPGHASEPGTWYAGTS------PQGLFRSTDHGA--SWEPVAGFNDHPMRRAWTGGEQDGTPD 175 (394)
T ss_dssp CCC----CCCCCEEEEEEECCTTSTTCEEEEEE------TTEEEEESSTTS--BCEECHHHHTCTTHHHHHCCC----CC
T ss_pred CcccccccccccceeEEEeCCCCCCCEEEEEec------CCcEEEEcCCCC--CeEECcCccCCccccccccccccCCCC
Confidence 11 1 112 22222 1 346777542 135888877777 8998853211110 0
Q ss_pred cceeEEEEEe---CCeEEEecCCCCCCCCccceEEeecCCCCeEEEEECCC---CCCCC-----cceeeEEEeC---CEE
Q 002047 281 CMYATASARS---DGLLLLCGGRDASSVPLASAYGLAKHRDGRWEWAIAPG---VSPSP-----RYQHAAVFVN---ARL 346 (975)
Q Consensus 281 r~~~~a~~~~---~g~lyvfGG~~~~~~~l~d~~~~~~~~~~~W~w~~~~g---~~P~~-----R~~hs~v~~~---~~L 346 (975)
.....++.+. .+.||+.... ..++...+.. .+|+-..... ..|.+ ...+.+++.. +.|
T Consensus 176 ~~~i~~i~~d~~~~~~l~vg~~~-------ggl~~s~DgG-~tW~~~~~~~~~~~~p~~~~~~g~~~~~i~~~~~~~~~l 247 (394)
T 3b7f_A 176 GPKMHSILVDPRDPKHLYIGMSS-------GGVFESTDAG-TDWKPLNRGCAANFLPDPNVEFGHDPHCVVQHPAAPDIL 247 (394)
T ss_dssp CCEEEEEEECTTCTTCEEEEEET-------BEEEEESSTT-SSCEECCTTCCCTTSSSSSSSSCBCEEEEEECSSSTTEE
T ss_pred CCceeEEEECCCCCCEEEEEECC-------CCEEEECCCC-CCceECCCCccccccCCCccccCcceeEEEECCCCCCEE
Confidence 1112233332 3577775331 1255554443 3554332110 11211 2234444442 567
Q ss_pred EEEcCcCCCCCccccCCcEEEEECCCCeEEEccc
Q 002047 347 HVSGGALGGGRMVEDSSSVAVLDTAAGVWCDTKS 380 (975)
Q Consensus 347 ~V~GG~~~~~~~~~~~~dv~~yD~~t~~W~~v~~ 380 (975)
|+.. ...|++++-...+|+.+..
T Consensus 248 ~vg~-----------~~gl~~s~D~G~tW~~~~~ 270 (394)
T 3b7f_A 248 YQQN-----------HCGIYRMDRREGVWKRIGD 270 (394)
T ss_dssp EEEE-----------TTEEEEEETTTTEEECGGG
T ss_pred EEEc-----------CCeEEEeCCCCCcceECCC
Confidence 7632 1338889888999998864
No 253
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=50.62 E-value=2.2e+02 Score=29.12 Aligned_cols=62 Identities=19% Similarity=0.274 Sum_probs=33.8
Q ss_pred EEEEEeccCCCCCccccEEEEEcCCCCCcEEEEEecCCCCCCCcccEEEEeCCcEEEEEcCCCCCCCCCcEEEEECCCC
Q 002047 186 MVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGPRYGHVMALVGQRYLMAIGGNDGKRPLADVWALDTAAK 264 (975)
Q Consensus 186 ~iyv~GG~~~~~~~~~dv~~yD~~t~~~~W~~v~~~g~~P~~R~~h~~~~~~~~~lyV~GG~~g~~~~ndv~~yDl~s~ 264 (975)
.+++.|+. ...+.+||+.+.. ..... .+ ....-.+++...++.+++.|+.++ .+..||+.+.
T Consensus 186 ~~~~s~~~------d~~i~i~d~~~~~--~~~~~-~~---h~~~v~~~~~s~~~~~l~s~s~Dg-----~i~iwd~~~~ 247 (340)
T 4aow_A 186 PIIVSCGW------DKLVKVWNLANCK--LKTNH-IG---HTGYLNTVTVSPDGSLCASGGKDG-----QAMLWDLNEG 247 (340)
T ss_dssp CEEEEEET------TSCEEEEETTTTE--EEEEE-CC---CSSCEEEEEECTTSSEEEEEETTC-----EEEEEETTTT
T ss_pred cEEEEEcC------CCEEEEEECCCCc--eeeEe-cC---CCCcEEEEEECCCCCEEEEEeCCC-----eEEEEEeccC
Confidence 45566654 3468899988752 21111 11 111112233333446777787765 5788898776
No 254
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=49.98 E-value=2.3e+02 Score=29.12 Aligned_cols=90 Identities=12% Similarity=-0.004 Sum_probs=50.3
Q ss_pred CEEEEEeccCCCCCccccEEEEEcCCCCCcEEEEEecCCCCCCCcccEEEEeCCcEEEEEcCCCCCCCCCcEEEEECCCC
Q 002047 185 TMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGPRYGHVMALVGQRYLMAIGGNDGKRPLADVWALDTAAK 264 (975)
Q Consensus 185 ~~iyv~GG~~~~~~~~~dv~~yD~~t~~~~W~~v~~~g~~P~~R~~h~~~~~~~~~lyV~GG~~g~~~~ndv~~yDl~s~ 264 (975)
+.+|+..-. ...+++||+.+.. ...+. .+ .+ -.+++...++.+|+.. .+.+++||+.+.
T Consensus 25 ~~l~~~d~~------~~~i~~~d~~~~~--~~~~~----~~-~~-~~~i~~~~dG~l~v~~-------~~~l~~~d~~~g 83 (297)
T 3g4e_A 25 NSLLFVDIP------AKKVCRWDSFTKQ--VQRVT----MD-AP-VSSVALRQSGGYVATI-------GTKFCALNWKEQ 83 (297)
T ss_dssp TEEEEEETT------TTEEEEEETTTCC--EEEEE----CS-SC-EEEEEEBTTSSEEEEE-------TTEEEEEETTTT
T ss_pred CEEEEEECC------CCEEEEEECCCCc--EEEEe----CC-Cc-eEEEEECCCCCEEEEE-------CCeEEEEECCCC
Confidence 578877643 3579999998763 33332 11 11 1233344444677653 147999999988
Q ss_pred CcEEEEccCCCCCCCCcceeEEEEEeCCeEEEe
Q 002047 265 PYEWRKLEPEGEGPPPCMYATASARSDGLLLLC 297 (975)
Q Consensus 265 ~~~W~~v~~~~~~P~~r~~~~a~~~~~g~lyvf 297 (975)
+++.+.......+..+....++-.++++|+.
T Consensus 84 --~~~~~~~~~~~~~~~~~~di~~d~dG~l~~~ 114 (297)
T 3g4e_A 84 --SAVVLATVDNDKKNNRFNDGKVDPAGRYFAG 114 (297)
T ss_dssp --EEEEEEECCTTCSSEEEEEEEECTTSCEEEE
T ss_pred --cEEEEEecCCCCCCCCCCCEEECCCCCEEEe
Confidence 7776654322111122233334457888874
No 255
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=49.52 E-value=2.3e+02 Score=28.98 Aligned_cols=64 Identities=9% Similarity=0.177 Sum_probs=33.4
Q ss_pred CEEEEEeccCCCCCccccEEEEEcCCCCCcEEEEEecCCCCCCCcccEEEEeC-C--cEEEEEcCCCCCCCCCcEEEEEC
Q 002047 185 TMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGPRYGHVMALVG-Q--RYLMAIGGNDGKRPLADVWALDT 261 (975)
Q Consensus 185 ~~iyv~GG~~~~~~~~~dv~~yD~~t~~~~W~~v~~~g~~P~~R~~h~~~~~~-~--~~lyV~GG~~g~~~~ndv~~yDl 261 (975)
+.+++.|+. ...+.+||+.+.. |..+... ......-..+.+. + +.+++.|+.++ .+..||+
T Consensus 67 g~~l~s~s~------D~~v~iWd~~~~~--~~~~~~~---~~h~~~v~~v~~~p~~~g~~l~s~s~d~-----~v~~wd~ 130 (297)
T 2pm7_B 67 GTILASCSY------DGKVMIWKEENGR--WSQIAVH---AVHSASVNSVQWAPHEYGPMLLVASSDG-----KVSVVEF 130 (297)
T ss_dssp CSEEEEEET------TTEEEEEEBSSSC--BCCCEEE---CCCSSCEEEEEECCGGGCSEEEEEETTS-----EEEEEEB
T ss_pred CCEEEEEcC------CCEEEEEEcCCCc--eEEEEEe---ecCCCceeEEEeCcCCCCcEEEEEECCC-----cEEEEEe
Confidence 456667764 3568899988653 5433311 1111112223332 1 24666776654 5677777
Q ss_pred CCC
Q 002047 262 AAK 264 (975)
Q Consensus 262 ~s~ 264 (975)
.+.
T Consensus 131 ~~~ 133 (297)
T 2pm7_B 131 KEN 133 (297)
T ss_dssp CSS
T ss_pred cCC
Confidence 654
No 256
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=49.11 E-value=2.4e+02 Score=29.07 Aligned_cols=192 Identities=10% Similarity=0.019 Sum_probs=86.4
Q ss_pred CcEEEEECCCCcEEEecCCCCCCCCccceEEEEe-CCEEEEEeccCCCCCccccEEEEEcCCCCCcEEEEEec-CCCCCC
Q 002047 150 ADVHCYDVLTNKWSRITPFGEPPTPRAAHVATAV-GTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQ-GPGPGP 227 (975)
Q Consensus 150 ~dv~~yD~~t~~W~~l~~~g~~P~pR~~hsa~~~-~~~iyv~GG~~~~~~~~~dv~~yD~~t~~~~W~~v~~~-g~~P~~ 227 (975)
+.+++|++ +.....+... .. ..++.+.. ++++|+.... ...+++||.. . +.+.+... ...+.
T Consensus 67 ~~i~~~~~-~g~~~~~~~~----~~-~~~gl~~d~dG~l~v~~~~------~~~v~~~~~~-g--~~~~~~~~~~~~~~- 130 (305)
T 3dr2_A 67 RRVLGWRE-DGTVDVLLDA----TA-FTNGNAVDAQQRLVHCEHG------RRAITRSDAD-G--QAHLLVGRYAGKRL- 130 (305)
T ss_dssp TEEEEEET-TSCEEEEEES----CS-CEEEEEECTTSCEEEEETT------TTEEEEECTT-S--CEEEEECEETTEEC-
T ss_pred CEEEEEeC-CCCEEEEeCC----CC-ccceeeECCCCCEEEEECC------CCEEEEECCC-C--CEEEEEeccCCCcc-
Confidence 46888888 4444444321 11 12333333 3577765321 2468888875 3 25554311 11111
Q ss_pred CcccEEEEeCCcEEEEE----cCCC---C-----CCCCCcEEEEECCCCCcEEEEccCCCCCCCCcceeEEEEEeCC-eE
Q 002047 228 RYGHVMALVGQRYLMAI----GGND---G-----KRPLADVWALDTAAKPYEWRKLEPEGEGPPPCMYATASARSDG-LL 294 (975)
Q Consensus 228 R~~h~~~~~~~~~lyV~----GG~~---g-----~~~~ndv~~yDl~s~~~~W~~v~~~~~~P~~r~~~~a~~~~~g-~l 294 (975)
..-..+++-.++.||+. |-.. + ......|++||+.+. +++.+. ... .-...+...++ .|
T Consensus 131 ~~~~~i~~d~dG~l~~td~~~g~~~~~~~~~~~~~~~~~~v~~~d~~~g--~~~~~~-~~~-----~p~gl~~spdg~~l 202 (305)
T 3dr2_A 131 NSPNDLIVARDGAIWFTDPPFGLRKPSQGCPADPELAHHSVYRLPPDGS--PLQRMA-DLD-----HPNGLAFSPDEQTL 202 (305)
T ss_dssp SCCCCEEECTTSCEEEECCSGGGSCGGGSCCCCCSSSCEEEEEECSSSC--CCEEEE-EES-----SEEEEEECTTSSEE
T ss_pred CCCCCEEECCCCCEEEeCcCCCccccccccccccccCCCeEEEEcCCCC--cEEEEe-cCC-----CCcceEEcCCCCEE
Confidence 11123444445578884 4321 0 112357999999877 555543 111 11222233344 57
Q ss_pred EEecCCCCCCCCccceEEeecCCCCeEEEEECCCCCCCCcceeeEEEe-CCEEEEEcCcCCCCCccccCCcEEEEECCCC
Q 002047 295 LLCGGRDASSVPLASAYGLAKHRDGRWEWAIAPGVSPSPRYQHAAVFV-NARLHVSGGALGGGRMVEDSSSVAVLDTAAG 373 (975)
Q Consensus 295 yvfGG~~~~~~~l~d~~~~~~~~~~~W~w~~~~g~~P~~R~~hs~v~~-~~~L~V~GG~~~~~~~~~~~~dv~~yD~~t~ 373 (975)
|+........ ....++.|+....+ ..-.......+.. .-.++++- ++.|||..+ ..|++||+...
T Consensus 203 yv~~~~~~~~-~~~~i~~~~~~~~~-l~~~~~~~~~~~~-~pdgi~~d~~G~lwv~~~-----------~gv~~~~~~g~ 268 (305)
T 3dr2_A 203 YVSQTPEQGH-GSVEITAFAWRDGA-LHDRRHFASVPDG-LPDGFCVDRGGWLWSSSG-----------TGVCVFDSDGQ 268 (305)
T ss_dssp EEEECCC----CCCEEEEEEEETTE-EEEEEEEECCSSS-CCCSEEECTTSCEEECCS-----------SEEEEECTTSC
T ss_pred EEEecCCcCC-CCCEEEEEEecCCC-ccCCeEEEECCCC-CCCeEEECCCCCEEEecC-----------CcEEEECCCCC
Confidence 7764321100 12456666554332 1111110000000 11122222 466776431 23899999766
Q ss_pred eEEEcc
Q 002047 374 VWCDTK 379 (975)
Q Consensus 374 ~W~~v~ 379 (975)
.-..+.
T Consensus 269 ~~~~~~ 274 (305)
T 3dr2_A 269 LLGHIP 274 (305)
T ss_dssp EEEEEE
T ss_pred EEEEEE
Confidence 554443
No 257
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=48.08 E-value=2.5e+02 Score=29.04 Aligned_cols=95 Identities=7% Similarity=0.042 Sum_probs=53.5
Q ss_pred CcEEEEECCCCcEEEecCCCCCCCCccceEEEEe-CCEEEEEeccCCCCCccccEEEEEcCCCCCcEEEEEecCCCCCCC
Q 002047 150 ADVHCYDVLTNKWSRITPFGEPPTPRAAHVATAV-GTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGPR 228 (975)
Q Consensus 150 ~dv~~yD~~t~~W~~l~~~g~~P~pR~~hsa~~~-~~~iyv~GG~~~~~~~~~dv~~yD~~t~~~~W~~v~~~g~~P~~R 228 (975)
..+++||+.... ...... +..-++++.. ++++|+...... ...+++||..+.. .+.+. ..+..+
T Consensus 53 ~~I~~~d~~g~~-~~~~~~-----~~~p~gia~~~dG~l~vad~~~~----~~~v~~~d~~~g~--~~~~~---~~~~~~ 117 (306)
T 2p4o_A 53 GEIVSITPDGNQ-QIHATV-----EGKVSGLAFTSNGDLVATGWNAD----SIPVVSLVKSDGT--VETLL---TLPDAI 117 (306)
T ss_dssp TEEEEECTTCCE-EEEEEC-----SSEEEEEEECTTSCEEEEEECTT----SCEEEEEECTTSC--EEEEE---ECTTCS
T ss_pred CeEEEECCCCce-EEEEeC-----CCCceeEEEcCCCcEEEEeccCC----cceEEEEcCCCCe--EEEEE---eCCCcc
Confidence 367889887643 332222 1223444444 357877653211 1248888877653 65554 234455
Q ss_pred cccEEEEeCCcEEEEEcCCCCCCCCCcEEEEECCCC
Q 002047 229 YGHVMALVGQRYLMAIGGNDGKRPLADVWALDTAAK 264 (975)
Q Consensus 229 ~~h~~~~~~~~~lyV~GG~~g~~~~ndv~~yDl~s~ 264 (975)
.....+...++.+|+.-- ....+|++|+.+.
T Consensus 118 ~~~g~~~~~~~~~~v~d~-----~~g~i~~~d~~~~ 148 (306)
T 2p4o_A 118 FLNGITPLSDTQYLTADS-----YRGAIWLIDVVQP 148 (306)
T ss_dssp CEEEEEESSSSEEEEEET-----TTTEEEEEETTTT
T ss_pred ccCcccccCCCcEEEEEC-----CCCeEEEEeCCCC
Confidence 555665565557777532 1347999999764
No 258
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=48.02 E-value=4.9e+02 Score=32.34 Aligned_cols=199 Identities=10% Similarity=-0.009 Sum_probs=94.6
Q ss_pred CcEEEEECCCCcEEEecCCCCCCCCccceEEEEeCCEEEEEeccCCCCCccccEEEEEcCCCCCcEEEEEecCCCCCCC-
Q 002047 150 ADVHCYDVLTNKWSRITPFGEPPTPRAAHVATAVGTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGPR- 228 (975)
Q Consensus 150 ~dv~~yD~~t~~W~~l~~~g~~P~pR~~hsa~~~~~~iyv~GG~~~~~~~~~dv~~yD~~t~~~~W~~v~~~g~~P~~R- 228 (975)
.++|.+|+.+.....+... .......+..-+++.+++...........++|++|+.+.. -..+...+.....|
T Consensus 33 ~~l~~~~~~gg~~~~lt~~----~~~v~~~~~SPDG~~la~~s~~~~~~~~~~i~~~d~~~g~--~~~lt~~~~~~~~~~ 106 (1045)
T 1k32_A 33 DDLWEHDLKSGSTRKIVSN----LGVINNARFFPDGRKIAIRVMRGSSLNTADLYFYNGENGE--IKRITYFSGKSTGRR 106 (1045)
T ss_dssp TEEEEEETTTCCEEEEECS----SSEEEEEEECTTSSEEEEEEEESTTCCEEEEEEEETTTTE--EEECCCCCEEEETTE
T ss_pred CcEEEEECCCCcEEEeeeC----CCcccCeEECCCCCEEEEEEeeccCCCCCeEEEEECCCCC--eEEcccCCCcccccc
Confidence 3789999988887777542 1111112222244444444321111123579999988752 33332100000001
Q ss_pred cccEEEEe-CCcEEEEEcCCCC-CCCCCcEEEEECCCCCcEEEEccCCCCCCCCcceeEEEEEeCCeEEEecCCCCC---
Q 002047 229 YGHVMALV-GQRYLMAIGGNDG-KRPLADVWALDTAAKPYEWRKLEPEGEGPPPCMYATASARSDGLLLLCGGRDAS--- 303 (975)
Q Consensus 229 ~~h~~~~~-~~~~lyV~GG~~g-~~~~ndv~~yDl~s~~~~W~~v~~~~~~P~~r~~~~a~~~~~g~lyvfGG~~~~--- 303 (975)
.....+.+ .++++++.+..+. ......+|.+|+.+. ....+..... .. ..... + +++.|..+..
T Consensus 107 ~~~~~~~~SpDg~ll~~~~~~~~~~~~~~l~~~~~~~g--~~~~l~~~~~------~~-~~~sp-G-~l~~~~~~~~~~~ 175 (1045)
T 1k32_A 107 MFTDVAGFDPDGNLIISTDAMQPFSSMTCLYRVENDGI--NFVPLNLGPA------TH-ILFAD-G-RRVIGRNTFELPH 175 (1045)
T ss_dssp ECSEEEEECTTCCEEEEECTTSSSTTCCEEEEEEGGGT--EEEECCSCSC------SE-EEEET-T-EEEEEESCSCCTT
T ss_pred cccccccCCCCCEEEEEECCcCCCcccceEEEEECCCC--CeEEecCCCc------ce-eeeCC-C-EEEEeccCCCccc
Confidence 11122333 3335655555432 223467999999887 6666554211 11 12223 5 5555432211
Q ss_pred -----CCCccceEEeecCCCCeEEEEECCCCCCCCcceeeEEEeCCEEEEEcCcCCCCCccccCCcEEEEECCCCeEEEc
Q 002047 304 -----SVPLASAYGLAKHRDGRWEWAIAPGVSPSPRYQHAAVFVNARLHVSGGALGGGRMVEDSSSVAVLDTAAGVWCDT 378 (975)
Q Consensus 304 -----~~~l~d~~~~~~~~~~~W~w~~~~g~~P~~R~~hs~v~~~~~L~V~GG~~~~~~~~~~~~dv~~yD~~t~~W~~v 378 (975)
+.....+|..... +..... .+ ......+.++.++.+++.+..++ ...+|.+|+.+..-..+
T Consensus 176 ~~~~~g~~~~~lw~~~~~--~~~~~l--~~---~~~~v~~~~~s~d~l~~~~~~dg-------~~~l~~~~~~g~~~~~l 241 (1045)
T 1k32_A 176 WKGYRGGTRGKIWIEVNS--GAFKKI--VD---MSTHVSSPVIVGHRIYFITDIDG-------FGQIYSTDLDGKDLRKH 241 (1045)
T ss_dssp STTCCSTTCCEEEEEEET--TEEEEE--EC---CSSCCEEEEEETTEEEEEECTTS-------SCEEEEEETTSCSCEEC
T ss_pred cccccCCCcCCEEEECCC--CCeEEC--cC---CCCcccceEEeCCEEEEEEeccC-------ceEEEEEeCCCCcceEe
Confidence 1123445554332 333322 21 22223345555777777765432 34589999877655544
Q ss_pred c
Q 002047 379 K 379 (975)
Q Consensus 379 ~ 379 (975)
.
T Consensus 242 ~ 242 (1045)
T 1k32_A 242 T 242 (1045)
T ss_dssp C
T ss_pred c
Confidence 3
No 259
>3oyo_A Hemopexin fold protein CP4; seeds, plant protein; 2.10A {Vigna unguiculata}
Probab=47.53 E-value=66 Score=32.86 Aligned_cols=109 Identities=10% Similarity=-0.012 Sum_probs=56.6
Q ss_pred eCCEEEEEeccCCCCCccccEEEEEcCCCCCcEEEEE---e-c---CCCCCC--CcccEEEEe--CCcEEEEEcCCCCCC
Q 002047 183 VGTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVV---V-Q---GPGPGP--RYGHVMALV--GQRYLMAIGGNDGKR 251 (975)
Q Consensus 183 ~~~~iyv~GG~~~~~~~~~dv~~yD~~t~~~~W~~v~---~-~---g~~P~~--R~~h~~~~~--~~~~lyV~GG~~g~~ 251 (975)
.++++|+|=| +.+|+||..+.+....... . . ..+|.. ...--+++. .++++|+|-|
T Consensus 69 ~~g~~~fFkg--------~~~W~~d~~~~t~~~~~~~gP~~I~~~wp~LP~~~~~~~IDAA~~~~~~gk~yfFkG----- 135 (225)
T 3oyo_A 69 EASEAYVFSG--------NHSAYIDYAPGTTNDKILVGPTTIAEMFPVLNNTVFEDSIDSAFRSTKGKEVYLFKG----- 135 (225)
T ss_dssp STTEEEEEET--------TEEEEEECCTTSSCCEEEEEEEEHHHHCGGGTTSTTTSCCCEEEECSSTTEEEEEET-----
T ss_pred CCCeEEEEcC--------CEEEEEecccccCCCceecCchhhhhcCCCCCCcccccccceEEEECCCCcEEEEeC-----
Confidence 4679999977 3689998754321122111 0 1 123321 002222222 3458999987
Q ss_pred CCCcEEEEECCCCCcEE--EEccCCCCCCC------CcceeEEEEE-eCCeEEEecCCCCCCCCccceEEeecC
Q 002047 252 PLADVWALDTAAKPYEW--RKLEPEGEGPP------PCMYATASAR-SDGLLLLCGGRDASSVPLASAYGLAKH 316 (975)
Q Consensus 252 ~~ndv~~yDl~s~~~~W--~~v~~~~~~P~------~r~~~~a~~~-~~g~lyvfGG~~~~~~~l~d~~~~~~~ 316 (975)
+..|+||.....+.. +.+.. ..|. +....+|... .++++|+|-| +..|.|+..
T Consensus 136 --~~yw~~d~~~~~~~~gPk~I~~--~fpg~~~~~f~~~iDAAf~~~~~g~~YfFkG--------~~ywr~d~~ 197 (225)
T 3oyo_A 136 --NKYVRIAYDSKQLVGNIRNIGD--GFPVLNGTEFESGIDACFASHKEPEAYLFKG--------QNYVRIDFT 197 (225)
T ss_dssp --TEEEEEETTTTEEEEEEEEHHH--HCGGGTTSTTTTCCSEEEECSSTTEEEEEET--------TEEEEEECC
T ss_pred --CeEEEEECCCCeecCCCcchhh--cCCCcccccCCCCcCEEEEeCCCCEEEEEEC--------CEEEEEeCC
Confidence 568999987762222 11211 1111 2233444443 5899999976 245666554
No 260
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=47.32 E-value=2.8e+02 Score=29.28 Aligned_cols=97 Identities=12% Similarity=0.075 Sum_probs=53.0
Q ss_pred EEEEEeccCCCCCccccEEEEEcCCCCCcEEEEEecCCCC-CCCcccEEEEeC-CcEEEEEcCCCCCCCCCcEEEEECCC
Q 002047 186 MVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGP-GPRYGHVMALVG-QRYLMAIGGNDGKRPLADVWALDTAA 263 (975)
Q Consensus 186 ~iyv~GG~~~~~~~~~dv~~yD~~t~~~~W~~v~~~g~~P-~~R~~h~~~~~~-~~~lyV~GG~~g~~~~ndv~~yDl~s 263 (975)
.+++.|+. ...+.+||+.+.. ..... ... ....-.+++... ++.+++.|+.++ .+..||+..
T Consensus 87 ~~l~s~~~------dg~i~iwd~~~~~--~~~~~---~~~~h~~~v~~~~~~~~~~~~l~s~~~d~-----~i~iwd~~~ 150 (383)
T 3ei3_B 87 TTVAVGSK------GGDIILWDYDVQN--KTSFI---QGMGPGDAITGMKFNQFNTNQLFVSSIRG-----ATTLRDFSG 150 (383)
T ss_dssp TEEEEEEB------TSCEEEEETTSTT--CEEEE---CCCSTTCBEEEEEEETTEEEEEEEEETTT-----EEEEEETTS
T ss_pred CEEEEEcC------CCeEEEEeCCCcc--cceee---ecCCcCCceeEEEeCCCCCCEEEEEeCCC-----EEEEEECCC
Confidence 56777764 3568999998764 44332 111 111222333333 336777776654 688899987
Q ss_pred CCcEEEEccCCCCCCCCcceeEEEEEeCCeEEEecCCCC
Q 002047 264 KPYEWRKLEPEGEGPPPCMYATASARSDGLLLLCGGRDA 302 (975)
Q Consensus 264 ~~~~W~~v~~~~~~P~~r~~~~a~~~~~g~lyvfGG~~~ 302 (975)
. ....+...... ...........++.+++.|+.++
T Consensus 151 ~--~~~~~~~~~~~--~~~v~~~~~~~~~~~l~~~~~d~ 185 (383)
T 3ei3_B 151 S--VIQVFAKTDSW--DYWYCCVDVSVSRQMLATGDSTG 185 (383)
T ss_dssp C--EEEEEECCCCS--SCCEEEEEEETTTTEEEEEETTS
T ss_pred C--ceEEEeccCCC--CCCeEEEEECCCCCEEEEECCCC
Confidence 6 66555433211 01223333445677777777553
No 261
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=46.31 E-value=1.4e+02 Score=32.80 Aligned_cols=21 Identities=0% Similarity=-0.013 Sum_probs=14.1
Q ss_pred cEEEEEcCCCCCCCCCcEEEEECCCC
Q 002047 239 RYLMAIGGNDGKRPLADVWALDTAAK 264 (975)
Q Consensus 239 ~~lyV~GG~~g~~~~ndv~~yDl~s~ 264 (975)
+..++.|+.++ .+..||+.+.
T Consensus 308 g~~l~s~~~D~-----~i~iwd~~~~ 328 (435)
T 4e54_B 308 GARLLTTDQKS-----EIRVYSASQW 328 (435)
T ss_dssp SSEEEEEESSS-----CEEEEESSSS
T ss_pred CCeeEEEcCCC-----EEEEEECCCC
Confidence 35666677664 5788888765
No 262
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=45.85 E-value=2.6e+02 Score=28.46 Aligned_cols=154 Identities=17% Similarity=0.125 Sum_probs=76.3
Q ss_pred CEEEEEeccCCCCCccccEEEEEcCCCCCcEEEEEecCCCCCCCcccEEEEeCCcEEEEEcCCCCCCCCCcEEEEECCCC
Q 002047 185 TMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGPRYGHVMALVGQRYLMAIGGNDGKRPLADVWALDTAAK 264 (975)
Q Consensus 185 ~~iyv~GG~~~~~~~~~dv~~yD~~t~~~~W~~v~~~g~~P~~R~~h~~~~~~~~~lyV~GG~~g~~~~ndv~~yDl~s~ 264 (975)
+.+|+.+.. ...+++||+.+. ...+.. +. ..-++++.-.++.||+.... ...+++||+.+.
T Consensus 40 ~~l~~~~~~------~~~i~~~~~~~~---~~~~~~----~~-~~~~~l~~~~dg~l~v~~~~-----~~~i~~~d~~~g 100 (296)
T 3e5z_A 40 SAVIFSDVR------QNRTWAWSDDGQ---LSPEMH----PS-HHQNGHCLNKQGHLIACSHG-----LRRLERQREPGG 100 (296)
T ss_dssp TEEEEEEGG------GTEEEEEETTSC---EEEEES----SC-SSEEEEEECTTCCEEEEETT-----TTEEEEECSTTC
T ss_pred CEEEEEeCC------CCEEEEEECCCC---eEEEEC----CC-CCcceeeECCCCcEEEEecC-----CCeEEEEcCCCC
Confidence 358887754 357899998874 444431 11 12234444444578876532 246999999887
Q ss_pred CcEEEEccCCCCCCCCcceeEEEEEeCCeEEEe----cCCC-------CCCCCccceEEeecCCCCeEEEEECCCCCCCC
Q 002047 265 PYEWRKLEPEGEGPPPCMYATASARSDGLLLLC----GGRD-------ASSVPLASAYGLAKHRDGRWEWAIAPGVSPSP 333 (975)
Q Consensus 265 ~~~W~~v~~~~~~P~~r~~~~a~~~~~g~lyvf----GG~~-------~~~~~l~d~~~~~~~~~~~W~w~~~~g~~P~~ 333 (975)
+.+.+...............+...+|++|+. |... ........+|.++.. +........ .
T Consensus 101 --~~~~~~~~~~~~~~~~~~~i~~d~~G~l~vtd~~~g~~~~~~~~~~~~~~~~~~l~~~~~~--g~~~~~~~~-~---- 171 (296)
T 3e5z_A 101 --EWESIADSFEGKKLNSPNDVCLAPDGSLWFSDPTYGIDKPEEGYGGEMELPGRWVFRLAPD--GTLSAPIRD-R---- 171 (296)
T ss_dssp --CEEEEECEETTEECCCCCCEEECTTSCEEEEECSHHHHCGGGSSCCCCCSSSCEEEEECTT--SCEEEEECC-C----
T ss_pred --cEEEEeeccCCCCCCCCCCEEECCCCCEEEECCccccccccccccccccCCCcEEEEECCC--CCEEEeecC-C----
Confidence 5554422111000011122334457889986 3311 011112467777655 333322211 1
Q ss_pred cceeeEEEe-CCEEEEEcCcCCCCCccccCCcEEEEECC-CCeE
Q 002047 334 RYQHAAVFV-NARLHVSGGALGGGRMVEDSSSVAVLDTA-AGVW 375 (975)
Q Consensus 334 R~~hs~v~~-~~~L~V~GG~~~~~~~~~~~~dv~~yD~~-t~~W 375 (975)
..-.+.++. ++++++.+.. ...|++||+. +.+.
T Consensus 172 ~~~~gi~~s~dg~~lv~~~~---------~~~i~~~~~~~~g~~ 206 (296)
T 3e5z_A 172 VKPNGLAFLPSGNLLVSDTG---------DNATHRYCLNARGET 206 (296)
T ss_dssp SSEEEEEECTTSCEEEEETT---------TTEEEEEEECSSSCE
T ss_pred CCCccEEECCCCCEEEEeCC---------CCeEEEEEECCCCcC
Confidence 111233333 4555554432 3458999986 5555
No 263
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=44.54 E-value=1.3e+02 Score=32.97 Aligned_cols=20 Identities=20% Similarity=0.257 Sum_probs=14.1
Q ss_pred cEEEEEcCCCCCCCCCcEEEEECCC
Q 002047 239 RYLMAIGGNDGKRPLADVWALDTAA 263 (975)
Q Consensus 239 ~~lyV~GG~~g~~~~ndv~~yDl~s 263 (975)
+.+++.|+.++ .|.+||+.+
T Consensus 141 ~~~lat~~~dg-----~V~vwd~~~ 160 (430)
T 2xyi_A 141 ACVIATKTPSS-----DVLVFDYTK 160 (430)
T ss_dssp EEEEEEECSSS-----CEEEEEGGG
T ss_pred CcEEEEECCCC-----cEEEEECCC
Confidence 46777777654 588888865
No 264
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=44.29 E-value=4.6e+02 Score=30.91 Aligned_cols=152 Identities=16% Similarity=0.108 Sum_probs=77.6
Q ss_pred ccEEEEEcCCCCCcEEEEEecCCCCCCCcccEEEEeCCcEEEEEcCCCCCCCCCcEEEEECCCCC-cEEEEccCCCCCCC
Q 002047 201 EDLHVLDLTQQRPRWHRVVVQGPGPGPRYGHVMALVGQRYLMAIGGNDGKRPLADVWALDTAAKP-YEWRKLEPEGEGPP 279 (975)
Q Consensus 201 ~dv~~yD~~t~~~~W~~v~~~g~~P~~R~~h~~~~~~~~~lyV~GG~~g~~~~ndv~~yDl~s~~-~~W~~v~~~~~~P~ 279 (975)
+++|++|+.+...+|..+. ... ..........++.||+....++ ....++.+|+.+.. -.|+.+.+....
T Consensus 259 ~~i~~~d~~~~~~~~~~l~---~~~--~~~~~~~~~~g~~l~~~t~~~~--~~~~l~~~d~~~~~~~~~~~l~~~~~~-- 329 (693)
T 3iuj_A 259 NRLYVKDLSQENAPLLTVQ---GDL--DADVSLVDNKGSTLYLLTNRDA--PNRRLVTVDAANPGPAHWRDLIPERQQ-- 329 (693)
T ss_dssp CEEEEEETTSTTCCCEEEE---CSS--SSCEEEEEEETTEEEEEECTTC--TTCEEEEEETTSCCGGGCEEEECCCSS--
T ss_pred cEEEEEECCCCCCceEEEe---CCC--CceEEEEeccCCEEEEEECCCC--CCCEEEEEeCCCCCccccEEEecCCCC--
Confidence 6899999977533588776 111 1112222333448888876543 34689999997742 148877654331
Q ss_pred CcceeEEEEEeCCeEEEecCCCCCCCCccceEEeecCCCCeEEEEECCCCCCCCcceeeEEE--eCCEEEEE-cCcCCCC
Q 002047 280 PCMYATASARSDGLLLLCGGRDASSVPLASAYGLAKHRDGRWEWAIAPGVSPSPRYQHAAVF--VNARLHVS-GGALGGG 356 (975)
Q Consensus 280 ~r~~~~a~~~~~g~lyvfGG~~~~~~~l~d~~~~~~~~~~~W~w~~~~g~~P~~R~~hs~v~--~~~~L~V~-GG~~~~~ 356 (975)
.. .....+++|++..-.++ ...++.++.. .+....+.. |.......... -++.|++. .+..
T Consensus 330 --~~--~~s~~g~~lv~~~~~~g----~~~l~~~d~~-g~~~~~l~~----p~~~~~~~~~~~~d~~~l~~~~ss~~--- 393 (693)
T 3iuj_A 330 --VL--TVHSGSGYLFAEYMVDA----TARVEQFDYE-GKRVREVAL----PGLGSVSGFNGKHDDPALYFGFENYA--- 393 (693)
T ss_dssp --CE--EEEEETTEEEEEEEETT----EEEEEEECTT-SCEEEEECC----SSSSEEEECCCCTTCSCEEEEEECSS---
T ss_pred --EE--EEEEECCEEEEEEEECC----eeEEEEEECC-CCeeEEeec----CCCceEEeeecCCCCCEEEEEecCCC---
Confidence 22 44455666665433222 2345555433 222222211 11111111111 12334433 2221
Q ss_pred CccccCCcEEEEECCCCeEEEcccC
Q 002047 357 RMVEDSSSVAVLDTAAGVWCDTKSV 381 (975)
Q Consensus 357 ~~~~~~~dv~~yD~~t~~W~~v~~~ 381 (975)
....++.||+.+.+++.+...
T Consensus 394 ----tP~~l~~~d~~~g~~~~l~~~ 414 (693)
T 3iuj_A 394 ----QPPTLYRFEPKSGAISLYRAS 414 (693)
T ss_dssp ----SCCEEEEECTTTCCEEEEECC
T ss_pred ----CCCEEEEEECCCCeEEEEEeC
Confidence 135699999999988877654
No 265
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=43.93 E-value=1.5e+02 Score=32.31 Aligned_cols=69 Identities=9% Similarity=-0.015 Sum_probs=39.8
Q ss_pred CCEEEEEeccCCC---CCccccEEEEEcCCCCCcEEEEEecCCCCCCCcccEEEEeCC-c-EEEEEcCCCCCCCCCcEEE
Q 002047 184 GTMVVIQGGIGPA---GLSAEDLHVLDLTQQRPRWHRVVVQGPGPGPRYGHVMALVGQ-R-YLMAIGGNDGKRPLADVWA 258 (975)
Q Consensus 184 ~~~iyv~GG~~~~---~~~~~dv~~yD~~t~~~~W~~v~~~g~~P~~R~~h~~~~~~~-~-~lyV~GG~~g~~~~ndv~~ 258 (975)
++++|+....... ....++++++|+.+.. .+. .++.+...+.+.+-.+ + .+|+..+. .+++.+
T Consensus 278 ~~~lyV~~~~~~~~~~~~~~~~V~VID~~t~~----vv~---~i~~g~~p~~i~~s~Dg~~~l~v~~~~-----~~~V~V 345 (373)
T 2mad_H 278 SDGIYLLTSEQSAWKLHAAAKEVTSVTGLVGQ----TSS---QISLGHDVDAISVAQDGGPDLYALSAG-----TEVLHI 345 (373)
T ss_pred CCEEEEEeccCCcccccCCCCeEEEEECCCCE----EEE---EEECCCCcCeEEECCCCCeEEEEEcCC-----CCeEEE
Confidence 4689987543211 1235789999998853 322 2233333455555443 3 45554322 268999
Q ss_pred EECCCC
Q 002047 259 LDTAAK 264 (975)
Q Consensus 259 yDl~s~ 264 (975)
||+.+.
T Consensus 346 iD~~t~ 351 (373)
T 2mad_H 346 YDAGAG 351 (373)
T ss_pred EECCCC
Confidence 999877
No 266
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=43.65 E-value=2.7e+02 Score=28.77 Aligned_cols=97 Identities=9% Similarity=0.002 Sum_probs=49.4
Q ss_pred CEEEEEeccCCCCCccccEEEEEcCCCCCcEEEEEecCCCCCCCcccEEEEeC-CcEEEEEcCCCCCCCCCcEEEEECCC
Q 002047 185 TMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGPRYGHVMALVG-QRYLMAIGGNDGKRPLADVWALDTAA 263 (975)
Q Consensus 185 ~~iyv~GG~~~~~~~~~dv~~yD~~t~~~~W~~v~~~g~~P~~R~~h~~~~~~-~~~lyV~GG~~g~~~~ndv~~yDl~s 263 (975)
+.+++.|+. ...+.+||+.+.. .-..+. + ....-.++.... ++.+++.|+.++ .+..||+.+
T Consensus 85 ~~~l~~~~~------dg~i~v~d~~~~~-~~~~~~--~---~~~~i~~~~~~~~~~~~l~s~~~dg-----~i~iwd~~~ 147 (366)
T 3k26_A 85 HPLLAVAGS------RGIIRIINPITMQ-CIKHYV--G---HGNAINELKFHPRDPNLLLSVSKDH-----ALRLWNIQT 147 (366)
T ss_dssp CEEEEEEET------TCEEEEECTTTCC-EEEEEE--S---CCSCEEEEEECSSCTTEEEEEETTS-----CEEEEETTT
T ss_pred CCEEEEecC------CCEEEEEEchhce-Eeeeec--C---CCCcEEEEEECCCCCCEEEEEeCCC-----eEEEEEeec
Confidence 467777775 3478999988753 122222 1 111122233332 346777777654 688999987
Q ss_pred CCcEEEEcc-CCCCCCCCcceeEEEEEeCCeEEEecCCCC
Q 002047 264 KPYEWRKLE-PEGEGPPPCMYATASARSDGLLLLCGGRDA 302 (975)
Q Consensus 264 ~~~~W~~v~-~~~~~P~~r~~~~a~~~~~g~lyvfGG~~~ 302 (975)
. +-...- .... ............++..++.|+.++
T Consensus 148 ~--~~~~~~~~~~~--~~~~v~~~~~~~~~~~l~~~~~dg 183 (366)
T 3k26_A 148 D--TLVAIFGGVEG--HRDEVLSADYDLLGEKIMSCGMDH 183 (366)
T ss_dssp T--EEEEEECSTTS--CSSCEEEEEECTTSSEEEEEETTS
T ss_pred C--eEEEEeccccc--ccCceeEEEECCCCCEEEEecCCC
Confidence 7 433321 1010 001222222334566777777553
No 267
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=43.11 E-value=3.1e+02 Score=28.57 Aligned_cols=30 Identities=13% Similarity=0.110 Sum_probs=20.8
Q ss_pred CCEEEEEcCcCCCCCccccCCcEEEEECCCCeEEEcccC
Q 002047 343 NARLHVSGGALGGGRMVEDSSSVAVLDTAAGVWCDTKSV 381 (975)
Q Consensus 343 ~~~L~V~GG~~~~~~~~~~~~dv~~yD~~t~~W~~v~~~ 381 (975)
++.+++.|+.++ .|.++|..+..|..+..+
T Consensus 164 ~~~~l~s~s~D~---------~i~iW~~~~~~~~~~~~~ 193 (330)
T 2hes_X 164 SEALLASSSYDD---------TVRIWKDYDDDWECVAVL 193 (330)
T ss_dssp SSSEEEEEETTS---------CEEEEEEETTEEEEEEEE
T ss_pred CCCEEEEEcCCC---------eEEEEECCCCCeeEEEEc
Confidence 466778887643 377788888888766554
No 268
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=42.43 E-value=4.1e+02 Score=29.86 Aligned_cols=154 Identities=11% Similarity=0.006 Sum_probs=70.5
Q ss_pred CCEEEEEeccCCCCCccccEEEEEcCCC----CCcEEEEEecCCCCCCCcc--cEEEEeC--CcEEEEEcCCCCCCCCCc
Q 002047 184 GTMVVIQGGIGPAGLSAEDLHVLDLTQQ----RPRWHRVVVQGPGPGPRYG--HVMALVG--QRYLMAIGGNDGKRPLAD 255 (975)
Q Consensus 184 ~~~iyv~GG~~~~~~~~~dv~~yD~~t~----~~~W~~v~~~g~~P~~R~~--h~~~~~~--~~~lyV~GG~~g~~~~nd 255 (975)
+++.+++|+ .+.+.+||+.+. . .-..+. ..... .+++... ++.+++.|+.++ .
T Consensus 29 dg~~l~~~~-------~~~v~v~~~~~~~~~~~-~~~~~~------~h~~~~v~~~~~sp~~~~~~l~s~~~dg-----~ 89 (615)
T 1pgu_A 29 TTNAIAYPC-------GKSAFVRCLDDGDSKVP-PVVQFT------GHGSSVVTTVKFSPIKGSQYLCSGDESG-----K 89 (615)
T ss_dssp TTTEEEEEE-------TTEEEEEECCSSCCSSC-SEEEEC------TTTTSCEEEEEECSSTTCCEEEEEETTS-----E
T ss_pred CCCEEEEec-------CCeEEEEECCCCCCccc-cceEEe------cCCCceEEEEEECcCCCCCEEEEecCCC-----E
Confidence 445566665 136899998864 2 122221 11222 2333334 446777777654 4
Q ss_pred EEEEECCCC----CcEEEEccCCCCCCCCcceeEEEEEeCCeEEEecCCCCCCCCccceEEeecCCCCeEEEEECCCCCC
Q 002047 256 VWALDTAAK----PYEWRKLEPEGEGPPPCMYATASARSDGLLLLCGGRDASSVPLASAYGLAKHRDGRWEWAIAPGVSP 331 (975)
Q Consensus 256 v~~yDl~s~----~~~W~~v~~~~~~P~~r~~~~a~~~~~g~lyvfGG~~~~~~~l~d~~~~~~~~~~~W~w~~~~g~~P 331 (975)
+.+||+.+. ......+...... ...........+++.++++|.+.+. ...++.++.. . ......+
T Consensus 90 v~vw~~~~~~~~~~~~~~~~~~~~~~--~~~v~~~~~s~~~~~l~~~~~~~~~--~~~v~~~d~~-~---~~~~~~~--- 158 (615)
T 1pgu_A 90 VIVWGWTFDKESNSVEVNVKSEFQVL--AGPISDISWDFEGRRLCVVGEGRDN--FGVFISWDSG-N---SLGEVSG--- 158 (615)
T ss_dssp EEEEEEEEEGGGTEEEEEEEEEEECC--SSCEEEEEECTTSSEEEEEECCSSC--SEEEEETTTC-C---EEEECCS---
T ss_pred EEEEeCCCCcccccccccccchhhcc--cccEEEEEEeCCCCEEEEeccCCCC--ccEEEEEECC-C---cceeeec---
Confidence 667776421 0001111111100 0122333344567777777754332 3445555421 1 1112221
Q ss_pred CCcceeeEEEe-CC-EEEEEcCcCCCCCccccCCcEEEEECCCCeEE
Q 002047 332 SPRYQHAAVFV-NA-RLHVSGGALGGGRMVEDSSSVAVLDTAAGVWC 376 (975)
Q Consensus 332 ~~R~~hs~v~~-~~-~L~V~GG~~~~~~~~~~~~dv~~yD~~t~~W~ 376 (975)
....-.++.+. ++ .+++.|+.+ ..+.+||+.+.+-.
T Consensus 159 ~~~~v~~~~~~~~~~~~l~~~~~d---------~~v~vwd~~~~~~~ 196 (615)
T 1pgu_A 159 HSQRINACHLKQSRPMRSMTVGDD---------GSVVFYQGPPFKFS 196 (615)
T ss_dssp CSSCEEEEEECSSSSCEEEEEETT---------TEEEEEETTTBEEE
T ss_pred CCccEEEEEECCCCCcEEEEEeCC---------CcEEEEeCCCccee
Confidence 11122233333 23 267777643 34888998876543
No 269
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=42.28 E-value=3e+02 Score=28.29 Aligned_cols=145 Identities=13% Similarity=0.026 Sum_probs=66.2
Q ss_pred ccEEEEEcCCCCCcEEEEEecCCCCCCCcccEEEEeCC----cEEEEEcCCCCCCCCCcEEEEECCCCCcEEEEccCCCC
Q 002047 201 EDLHVLDLTQQRPRWHRVVVQGPGPGPRYGHVMALVGQ----RYLMAIGGNDGKRPLADVWALDTAAKPYEWRKLEPEGE 276 (975)
Q Consensus 201 ~dv~~yD~~t~~~~W~~v~~~g~~P~~R~~h~~~~~~~----~~lyV~GG~~g~~~~ndv~~yDl~s~~~~W~~v~~~~~ 276 (975)
+.+.+||+.+.. ....+...........-.+++...+ +.+++.|+.++ .+..||+.+...... +.....
T Consensus 44 ~~v~vw~~~~~~-~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~~dg-----~i~v~d~~~~~~~~~-~~~~~~ 116 (366)
T 3k26_A 44 NRVTLYECHSQG-EIRLLQSYVDADADENFYTCAWTYDSNTSHPLLAVAGSRG-----IIRIINPITMQCIKH-YVGHGN 116 (366)
T ss_dssp TEEEEEEECGGG-CEEEEEEEECSCTTCCEEEEEEEECTTTCCEEEEEEETTC-----EEEEECTTTCCEEEE-EESCCS
T ss_pred CEEEEEEcCCCc-EEEeeeeccccCCCCcEEEEEeccCCCCCCCEEEEecCCC-----EEEEEEchhceEeee-ecCCCC
Confidence 358888887643 2333331111111111222222222 35777777664 688899887632222 211111
Q ss_pred CCCCcceeEEEEEe-CCeEEEecCCCCCCCCccceEEeecCCCCeEEEEECCCCCCCCcceeeEEEe-CCEEEEEcCcCC
Q 002047 277 GPPPCMYATASARS-DGLLLLCGGRDASSVPLASAYGLAKHRDGRWEWAIAPGVSPSPRYQHAAVFV-NARLHVSGGALG 354 (975)
Q Consensus 277 ~P~~r~~~~a~~~~-~g~lyvfGG~~~~~~~l~d~~~~~~~~~~~W~w~~~~g~~P~~R~~hs~v~~-~~~L~V~GG~~~ 354 (975)
......... ++.+++.|+.++. +..++.... ...... .........-.++++. ++..++.|+.++
T Consensus 117 -----~i~~~~~~~~~~~~l~s~~~dg~------i~iwd~~~~-~~~~~~-~~~~~~~~~v~~~~~~~~~~~l~~~~~dg 183 (366)
T 3k26_A 117 -----AINELKFHPRDPNLLLSVSKDHA------LRLWNIQTD-TLVAIF-GGVEGHRDEVLSADYDLLGEKIMSCGMDH 183 (366)
T ss_dssp -----CEEEEEECSSCTTEEEEEETTSC------EEEEETTTT-EEEEEE-CSTTSCSSCEEEEEECTTSSEEEEEETTS
T ss_pred -----cEEEEEECCCCCCEEEEEeCCCe------EEEEEeecC-eEEEEe-cccccccCceeEEEECCCCCEEEEecCCC
Confidence 112222223 6777888876542 334433332 222111 1111112222233333 456777777533
Q ss_pred CCCccccCCcEEEEECCCCe
Q 002047 355 GGRMVEDSSSVAVLDTAAGV 374 (975)
Q Consensus 355 ~~~~~~~~~dv~~yD~~t~~ 374 (975)
.+.+||+.+.+
T Consensus 184 ---------~i~i~d~~~~~ 194 (366)
T 3k26_A 184 ---------SLKLWRINSKR 194 (366)
T ss_dssp ---------CEEEEESCSHH
T ss_pred ---------CEEEEECCCCc
Confidence 38889988753
No 270
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=42.04 E-value=3e+02 Score=28.15 Aligned_cols=141 Identities=12% Similarity=0.226 Sum_probs=73.5
Q ss_pred EeCCEEEEEeccCCCCCccccEEEEEcCCCCCcEEEEEecCCCCCCCcccEEEEeCCcEEEEEcCCCCCCCCCcEEEEEC
Q 002047 182 AVGTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGPRYGHVMALVGQRYLMAIGGNDGKRPLADVWALDT 261 (975)
Q Consensus 182 ~~~~~iyv~GG~~~~~~~~~dv~~yD~~t~~~~W~~v~~~g~~P~~R~~h~~~~~~~~~lyV~GG~~g~~~~ndv~~yDl 261 (975)
+.++.||+... ...+++||.. ....|.... +.. .-.+.+...++.||+.. .+ ..+++||+
T Consensus 105 ~~~~~l~v~t~-------~~~l~~~d~~-g~~~~~~~~-----~~~-~~~~~~~~~~g~l~vgt-~~-----~~l~~~d~ 164 (330)
T 3hxj_A 105 IFEDILYVTSM-------DGHLYAINTD-GTEKWRFKT-----KKA-IYATPIVSEDGTIYVGS-ND-----NYLYAINP 164 (330)
T ss_dssp EETTEEEEECT-------TSEEEEECTT-SCEEEEEEC-----SSC-CCSCCEECTTSCEEEEC-TT-----SEEEEECT
T ss_pred EECCEEEEEec-------CCEEEEEcCC-CCEEEEEcC-----CCc-eeeeeEEcCCCEEEEEc-CC-----CEEEEECC
Confidence 34778877532 2468999988 434576543 111 12233344344677743 21 46999999
Q ss_pred CCCCcEEEEccCCCCCCCCcceeEEEEEeCCeEEEecCCCCCCCCccceEEeecCCCCeEEEEECCCCCCCCcceeeEEE
Q 002047 262 AAKPYEWRKLEPEGEGPPPCMYATASARSDGLLLLCGGRDASSVPLASAYGLAKHRDGRWEWAIAPGVSPSPRYQHAAVF 341 (975)
Q Consensus 262 ~s~~~~W~~v~~~~~~P~~r~~~~a~~~~~g~lyvfGG~~~~~~~l~d~~~~~~~~~~~W~w~~~~g~~P~~R~~hs~v~ 341 (975)
. ....|....... .....+...++.||+.. ..++.++ .++.-.|....+. ..-.+.+.
T Consensus 165 ~-g~~~~~~~~~~~------~~~~~~~d~~g~l~v~t---------~~l~~~d--~~g~~~~~~~~~~----~~~~~~~~ 222 (330)
T 3hxj_A 165 D-GTEKWRFKTNDA------ITSAASIGKDGTIYFGS---------DKVYAIN--PDGTEKWNFYAGY----WTVTRPAI 222 (330)
T ss_dssp T-SCEEEEEECSSC------CCSCCEECTTCCEEEES---------SSEEEEC--TTSCEEEEECCSS----CCCSCCEE
T ss_pred C-CCEeEEEecCCC------ceeeeEEcCCCEEEEEe---------CEEEEEC--CCCcEEEEEccCC----cceeceEE
Confidence 8 545676643211 11222233477888754 3467776 2333344444321 11223333
Q ss_pred e-CCEEEEEcCcCCCCCccccCCcEEEEECCCCe
Q 002047 342 V-NARLHVSGGALGGGRMVEDSSSVAVLDTAAGV 374 (975)
Q Consensus 342 ~-~~~L~V~GG~~~~~~~~~~~~dv~~yD~~t~~ 374 (975)
. ++.||+.. . ...+++||.....
T Consensus 223 ~~~g~l~v~t-~---------~~gl~~~~~~g~~ 246 (330)
T 3hxj_A 223 SEDGTIYVTS-L---------DGHLYAINPDGTE 246 (330)
T ss_dssp CTTSCEEEEE-T---------TTEEEEECTTSCE
T ss_pred CCCCeEEEEc-C---------CCeEEEECCCCCE
Confidence 4 34777742 1 2348888875554
No 271
>1itv_A MMP9; adaptive molecular recognition, beta propeller, dimer, hydrolase; 1.95A {Homo sapiens} SCOP: b.66.1.1
Probab=41.81 E-value=1.3e+02 Score=29.83 Aligned_cols=93 Identities=10% Similarity=0.083 Sum_probs=48.8
Q ss_pred CCEEEEEeccCCCCCccccEEEEEcCCCCCcEEEEEecC--CCCCC--CcccEEEEeCCcEEEEEcCCCCCCCCCcEEEE
Q 002047 184 GTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQG--PGPGP--RYGHVMALVGQRYLMAIGGNDGKRPLADVWAL 259 (975)
Q Consensus 184 ~~~iyv~GG~~~~~~~~~dv~~yD~~t~~~~W~~v~~~g--~~P~~--R~~h~~~~~~~~~lyV~GG~~g~~~~ndv~~y 259 (975)
++++|+|-| +..|+|+..+. ....... .+|.. .-..+.. ..++++|+|-| +..|+|
T Consensus 64 ~~~~yfFkG--------~~yw~~~~~~~----~~Pk~i~~~G~p~~~~~iDAA~~-~~~g~~yfFkg-------~~ywr~ 123 (195)
T 1itv_A 64 SKKLFFFSG--------RQVWVYTGASV----LGPRRLDKLGLGADVAQVTGALR-SGRGKMLLFSG-------RRLWRF 123 (195)
T ss_dssp TCCEEEEET--------TEEEEEETTEE----EEEEEGGGGTCCTTCCCCCEEEE-CSTTEEEEEET-------TEEEEE
T ss_pred CCeEEEEeC--------CEEEEEcCCcc----CCCEEeeecccCCCccceeEEEE-cCCCeEEEEeC-------CEEEEE
Confidence 568999977 36888885432 1111111 23332 2333333 44558999976 468999
Q ss_pred ECCCCCcE--E-EEcc-CCCCCCCCcceeEEEEEeCCeEEEecC
Q 002047 260 DTAAKPYE--W-RKLE-PEGEGPPPCMYATASARSDGLLLLCGG 299 (975)
Q Consensus 260 Dl~s~~~~--W-~~v~-~~~~~P~~r~~~~a~~~~~g~lyvfGG 299 (975)
|..++... . +.+. .-...| ....+|.. .++.+|+|-|
T Consensus 124 d~~~~~~~~gyPr~i~~~w~Gvp--~~idaa~~-~~g~~Yffkg 164 (195)
T 1itv_A 124 DVKAQMVDPRSASEVDRMFPGVP--LDTHDVFQ-FREKAYFCQD 164 (195)
T ss_dssp ETTTTEECGGGCEEHHHHSTTSC--SSCSEEEE-ETTEEEEEET
T ss_pred eCCcccccCCCccChhhcCCCCC--CCCCEEEE-eCCeEEEEeC
Confidence 99775100 0 0111 111111 22333443 4699999976
No 272
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=41.52 E-value=4.4e+02 Score=29.87 Aligned_cols=129 Identities=12% Similarity=0.094 Sum_probs=60.7
Q ss_pred CCEEEEEeccC-CCCCccccEEEEEcCCCCCcEEEEEecCCCCCCC--cccEEE-----------E--eCCcEEEEEcCC
Q 002047 184 GTMVVIQGGIG-PAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGPR--YGHVMA-----------L--VGQRYLMAIGGN 247 (975)
Q Consensus 184 ~~~iyv~GG~~-~~~~~~~dv~~yD~~t~~~~W~~v~~~g~~P~~R--~~h~~~-----------~--~~~~~lyV~GG~ 247 (975)
+..+|+.-+.. ..+..-+-+-+.|+...++...++-..-++|..- .+|..- . .+.++|||-|..
T Consensus 25 e~~~y~~~~~~~~~~~~~d~la~vDvdp~s~ty~~vi~~~~~p~~gde~HH~gwn~css~~~~~~~~~~~r~~l~v~~l~ 104 (462)
T 2ece_A 25 EDLAYVACLYTGTGINRADFIAVVDVNPKSETYSKIVHKVELPYINDELHHFGWNACSSALCPNGKPNIERRFLIVPGLR 104 (462)
T ss_dssp CSEEEEEEECTTTTCCCCCEEEEEECCTTSTTTTSEEEEEECSSSCCCBCCCEESCCGGGGSTTCCTTCCSCEEEEEBTT
T ss_pred ceEEEEEeeccCCCCCCCCeEEEEECCCCCCCcceEEEEEECCCCCCcccccchhhhhhhcccccCCCccCCEEEEccCC
Confidence 34667766543 2334456778888875332222221111222210 111110 2 345578887765
Q ss_pred CCCCCCCcEEEEECCCCCc--EEEEccC---CCCCCCCcceeEEEEEeCCeEEEecCCCCCCCCccceEEeecCCC
Q 002047 248 DGKRPLADVWALDTAAKPY--EWRKLEP---EGEGPPPCMYATASARSDGLLLLCGGRDASSVPLASAYGLAKHRD 318 (975)
Q Consensus 248 ~g~~~~ndv~~yDl~s~~~--~W~~v~~---~~~~P~~r~~~~a~~~~~g~lyvfGG~~~~~~~l~d~~~~~~~~~ 318 (975)
+ +.|+++|+.+++. +=.++-. ........+-|+..+..++ |||.---+..+..-..+..++..+.
T Consensus 105 s-----~~I~viD~~t~p~~p~~~k~ie~~~~~~~~g~s~Ph~~~~~pdG-i~Vs~~g~~~g~~~g~v~vlD~~T~ 174 (462)
T 2ece_A 105 S-----SRIYIIDTKPNPREPKIIKVIEPEEVKKVSGYSRLHTVHCGPDA-IYISALGNEEGEGPGGILMLDHYSF 174 (462)
T ss_dssp T-----CCEEEEECCSCTTSCEEEEEECHHHHHHHHCEEEEEEEEECSSC-EEEEEEEETTSCSCCEEEEECTTTC
T ss_pred C-----CeEEEEECCCCCCCceeeeeechhhcccccCCCcccceeECCCe-EEEEcCCCcCCCCCCeEEEEECCCC
Confidence 4 6899999987642 2222110 0000011234555566677 7763221222223466777766544
No 273
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=41.34 E-value=3e+02 Score=27.97 Aligned_cols=103 Identities=14% Similarity=0.062 Sum_probs=52.1
Q ss_pred CcEEEEECCCCcEEEecCCCCCCCCc-cceEEEEe-C-CEEEEEeccCCCCCccccEEEEEcCCCCCcEEEEEecCCCCC
Q 002047 150 ADVHCYDVLTNKWSRITPFGEPPTPR-AAHVATAV-G-TMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPG 226 (975)
Q Consensus 150 ~dv~~yD~~t~~W~~l~~~g~~P~pR-~~hsa~~~-~-~~iyv~GG~~~~~~~~~dv~~yD~~t~~~~W~~v~~~g~~P~ 226 (975)
+.++.+|+.+.+.......+ ... .-+.++.. + +.+|+.+.. ...+++||+.+....+ .+. .+. +.
T Consensus 11 ~~v~~~d~~~~~~~~~~~~~---~~~~~~~~~~~s~dg~~l~v~~~~------~~~v~~~d~~~~~~~~-~~~-~~~-~~ 78 (337)
T 1pby_B 11 DKLVVIDTEKMAVDKVITIA---DAGPTPMVPMVAPGGRIAYATVNK------SESLVKIDLVTGETLG-RID-LST-PE 78 (337)
T ss_dssp TEEEEEETTTTEEEEEEECT---TCTTCCCCEEECTTSSEEEEEETT------TTEEEEEETTTCCEEE-EEE-CCB-TT
T ss_pred CeEEEEECCCCcEEEEEEcC---CCCCCccceEEcCCCCEEEEEeCC------CCeEEEEECCCCCeEe-eEE-cCC-cc
Confidence 47889999887655433321 110 11223333 3 377777643 3579999998764112 222 111 00
Q ss_pred --CCcccEEEEe-CCcEEEEEcCCC---CCC---CCCcEEEEECCCC
Q 002047 227 --PRYGHVMALV-GQRYLMAIGGND---GKR---PLADVWALDTAAK 264 (975)
Q Consensus 227 --~R~~h~~~~~-~~~~lyV~GG~~---g~~---~~ndv~~yDl~s~ 264 (975)
...-+.+++. +++.||+..... ... .-+.+++||+.+.
T Consensus 79 ~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~i~v~d~~~~ 125 (337)
T 1pby_B 79 ERVKSLFGAALSPDGKTLAIYESPVRLELTHFEVQPTRVALYDAETL 125 (337)
T ss_dssp EEEECTTCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEETTTT
T ss_pred cccccccceEECCCCCEEEEEecccccccccccccCceEEEEECCCC
Confidence 0012233333 334677764210 011 1368999999887
No 274
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=40.48 E-value=3.7e+02 Score=31.14 Aligned_cols=208 Identities=13% Similarity=0.077 Sum_probs=96.9
Q ss_pred CcEEEEECCCCcEEEecCCCCCCCCccceEEEEeC--CEEEEEeccCCCCCccccEEEEEcCCCCCcEEEEEec-CCCCC
Q 002047 150 ADVHCYDVLTNKWSRITPFGEPPTPRAAHVATAVG--TMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQ-GPGPG 226 (975)
Q Consensus 150 ~dv~~yD~~t~~W~~l~~~g~~P~pR~~hsa~~~~--~~iyv~GG~~~~~~~~~dv~~yD~~t~~~~W~~v~~~-g~~P~ 226 (975)
+.++..|..+.....+... +..+.-|...... .++|+.-. ..+.+.++|+.+.. -...-.. |..|.
T Consensus 320 g~v~~vd~~~~~~~~v~~i---~~~~~~~d~~~~pdgr~~~va~~------~sn~V~ViD~~t~k--l~~~i~vgg~~Ph 388 (567)
T 1qks_A 320 GKILLVDYTDLNNLKTTEI---SAERFLHDGGLDGSHRYFITAAN------ARNKLVVIDTKEGK--LVAIEDTGGQTPH 388 (567)
T ss_dssp TEEEEEETTCSSEEEEEEE---ECCSSEEEEEECTTSCEEEEEEG------GGTEEEEEETTTTE--EEEEEECSSSSBC
T ss_pred CeEEEEecCCCccceeeee---eccccccCceECCCCCEEEEEeC------CCCeEEEEECCCCc--EEEEEeccCcCCC
Confidence 5666777666554444332 3455566555543 35555433 25789999999863 2222234 66676
Q ss_pred CCcccEEEEeCCcEEEEEcCCCCCCCCCcEEEEECCCCC---cEEEEccCCCCCCCCcceeEEEEEeCCeEEEecCCCCC
Q 002047 227 PRYGHVMALVGQRYLMAIGGNDGKRPLADVWALDTAAKP---YEWRKLEPEGEGPPPCMYATASARSDGLLLLCGGRDAS 303 (975)
Q Consensus 227 ~R~~h~~~~~~~~~lyV~GG~~g~~~~ndv~~yDl~s~~---~~W~~v~~~~~~P~~r~~~~a~~~~~g~lyvfGG~~~~ 303 (975)
+..+.....-+.+.+|+.+-.. -+.|.++|..+.. +.|+.+....... .........-.+..+|+---.+.+
T Consensus 389 pg~g~~~~~p~~g~v~~t~~~g----~~~Vsvid~~~~~~~~~~~kvv~~i~~~g-~g~~~i~~~p~~~~l~v~~~~~~~ 463 (567)
T 1qks_A 389 PGRGANFVHPTFGPVWATSHMG----DDSVALIGTDPEGHPDNAWKILDSFPALG-GGSLFIKTHPNSQYLYVDATLNPE 463 (567)
T ss_dssp CTTCEEEEETTTEEEEEEEBSS----SSEEEEEECCTTTCTTTBTSEEEEEECSC-SCCCCEECCTTCSEEEEECTTCSS
T ss_pred CccceeeECCCCCcEEEeCCCC----CCeEEEecCCCCCCccccCEEEEEEecCC-CCCEEEEeCCCCCeEEEecCCCCC
Confidence 6444333222234677765221 2468888887631 1365554332211 011111111223467774321111
Q ss_pred CCCccceEEeecCCC------CeEEEEECC---CCC-CCCcceeeEEEe-CCEEEEEcCcCCCCCccccCCcEEEEECCC
Q 002047 304 SVPLASAYGLAKHRD------GRWEWAIAP---GVS-PSPRYQHAAVFV-NARLHVSGGALGGGRMVEDSSSVAVLDTAA 372 (975)
Q Consensus 304 ~~~l~d~~~~~~~~~------~~W~w~~~~---g~~-P~~R~~hs~v~~-~~~L~V~GG~~~~~~~~~~~~dv~~yD~~t 372 (975)
....+.+..|+..+. ..+..+.+. +.. +..|..|-...- +..+|+.-+. +. ...+.|.+||.+|
T Consensus 464 ~~~~~~v~v~d~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~s~~~-~~----~~~~~i~v~D~~t 538 (567)
T 1qks_A 464 AEISGSVAVFDIKAMTGDGSDPEFKTLPIAEWAGITEGQPRVVQGEFNKDGTEVWFSVWN-GK----DQESALVVVDDKT 538 (567)
T ss_dssp HHHHTCEEEEEGGGCCCSSSCCCEEEECHHHHHTCCSSCCEEEEEEECTTSSEEEEEEEC-CT----TSCCEEEEEETTT
T ss_pred cccCceEEEEECCcccccccCCCcEEeccccccccCCCCcceEeeeECCCCCEEEEEeec-CC----CCCCcEEEEECCC
Confidence 001234455544322 112222211 111 123433332222 4578876221 11 1256799999999
Q ss_pred CeEEEc
Q 002047 373 GVWCDT 378 (975)
Q Consensus 373 ~~W~~v 378 (975)
.+=...
T Consensus 539 ~~~~~~ 544 (567)
T 1qks_A 539 LELKHV 544 (567)
T ss_dssp TEEEEE
T ss_pred ceEEEE
Confidence 875543
No 275
>2yeq_A Apased, PHOD, alkaline phosphatase D; hydrolase, phosphodiesterase; HET: PE5; 1.93A {Bacillus subtilis}
Probab=39.93 E-value=29 Score=40.39 Aligned_cols=24 Identities=17% Similarity=0.439 Sum_probs=18.1
Q ss_pred HHHHHHHHHHcCCe--EEEEeccccc
Q 002047 884 PDRVMEFCNNNDLQ--LIVRAHECVM 907 (975)
Q Consensus 884 ~~~~~~fl~~~~l~--~iiR~H~~~~ 907 (975)
.+.+..+|++++++ +++-||.-..
T Consensus 359 R~~Ll~~l~~~~v~n~vvLsGDvH~~ 384 (527)
T 2yeq_A 359 RERVINFIKSKNLNNVVVLTGDVHAS 384 (527)
T ss_dssp HHHHHHHHHHTTCCCEEEEECSSSSE
T ss_pred HHHHHHHHHHhCCCCEEEEEcchHHH
Confidence 45778889999985 8888886543
No 276
>4h1s_A 5'-nucleotidase; hydrolase; HET: NAG; 2.20A {Homo sapiens}
Probab=39.20 E-value=29 Score=40.40 Aligned_cols=66 Identities=21% Similarity=0.222 Sum_probs=39.5
Q ss_pred CEEEEecCCCCHH--------------------HHHHHHHHhCCCCCCCCccceeEEEeccccCCCCC-----hHHHHHH
Q 002047 699 PIKIFGDLHGQFG--------------------DLMRLFDEYGSPSTAGDIAYIDYLFLGDYVDRGQH-----SLETITL 753 (975)
Q Consensus 699 ~i~vvGDiHG~~~--------------------~L~~ll~~~g~~~~~~~~~~~~~vfLGDyVDRG~~-----s~evl~l 753 (975)
.|+-+-|+||++. .|..+++.+.-... ..-+|..||.+...+. ...++.+
T Consensus 5 tILhtnD~Hg~l~~~~~~~~~~~~~~~~~GG~arlat~i~~~r~~~~-----n~llldaGD~~qGs~~~~~~~g~~~i~~ 79 (530)
T 4h1s_A 5 TILHTNDVHSRLEQTSEDSSKCVNASRCMGGVARLFTKVQQIRRAEP-----NVLLLDAGDQYQGTIWFTVYKGAEVAHF 79 (530)
T ss_dssp EEEEECCCTTCCSCBCTTSSBCCSTTSCBCCHHHHHHHHHHHHHHCS-----SEEEEECSCCSCSSHHHHHHTTHHHHHH
T ss_pred EEEEEcccccCCcccCcccccccccccccCcHHHHHHHHHHHHhhCc-----CeEEEEeCCcccchHHHHHhCChHHHHH
Confidence 4677889999763 34444444321111 1245568999986542 3445566
Q ss_pred HHHhhhcCCCCEEEEeccccc
Q 002047 754 LLALKVEYPNNVHLIRGNHEA 774 (975)
Q Consensus 754 l~~lk~~~P~~v~llrGNHE~ 774 (975)
|-+|. -=.+..||||.
T Consensus 80 mN~lg-----yDa~~lGNHEF 95 (530)
T 4h1s_A 80 MNALR-----YDAMALGNHEF 95 (530)
T ss_dssp HHHTT-----CCEEECCGGGG
T ss_pred HhccC-----CCEEEEchhhh
Confidence 66653 33567899997
No 277
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=38.87 E-value=4.2e+02 Score=29.98 Aligned_cols=112 Identities=14% Similarity=0.061 Sum_probs=52.4
Q ss_pred ccCcEEEEECCCC----cEEEecCCCCC----CCCccceEEEEeCCEEEEEe-ccCCCCCccccEEEEEcCCCCCcEEEE
Q 002047 148 ATADVHCYDVLTN----KWSRITPFGEP----PTPRAAHVATAVGTMVVIQG-GIGPAGLSAEDLHVLDLTQQRPRWHRV 218 (975)
Q Consensus 148 ~~~dv~~yD~~t~----~W~~l~~~g~~----P~pR~~hsa~~~~~~iyv~G-G~~~~~~~~~dv~~yD~~t~~~~W~~v 218 (975)
..+.++++|..++ +-.+.....+. ...| -|+..+..+.|||-- |. ..+.....+.++|..+.. --.++
T Consensus 104 ~s~~I~viD~~t~p~~p~~~k~ie~~~~~~~~g~s~-Ph~~~~~pdGi~Vs~~g~-~~g~~~g~v~vlD~~T~~-v~~~~ 180 (462)
T 2ece_A 104 RSSRIYIIDTKPNPREPKIIKVIEPEEVKKVSGYSR-LHTVHCGPDAIYISALGN-EEGEGPGGILMLDHYSFE-PLGKW 180 (462)
T ss_dssp TTCCEEEEECCSCTTSCEEEEEECHHHHHHHHCEEE-EEEEEECSSCEEEEEEEE-TTSCSCCEEEEECTTTCC-EEEEC
T ss_pred CCCeEEEEECCCCCCCceeeeeechhhcccccCCCc-ccceeECCCeEEEEcCCC-cCCCCCCeEEEEECCCCe-EEEEE
Confidence 3468999999876 33332210000 1112 344444433255532 22 233345789999999863 11122
Q ss_pred EecCCCCCCCcccEEEEe-CCcEEEEEc---------CCCCC----CCCCcEEEEECCCC
Q 002047 219 VVQGPGPGPRYGHVMALV-GQRYLMAIG---------GNDGK----RPLADVWALDTAAK 264 (975)
Q Consensus 219 ~~~g~~P~~R~~h~~~~~-~~~~lyV~G---------G~~g~----~~~ndv~~yDl~s~ 264 (975)
+ .+..|. -+++..-+- ..+.+|+-- |.... .+.+.|.+||+.+.
T Consensus 181 ~-~~~~~~-~~~Yd~~~~p~~~~mvsS~wg~p~~~~~g~~~~~~~~~~~d~V~v~D~~~~ 238 (462)
T 2ece_A 181 E-IDRGDQ-YLAYDFWWNLPNEVLVSSEWAVPNTIEDGLKLEHLKDRYGNRIHFWDLRKR 238 (462)
T ss_dssp C-SBCTTC-CCCCCEEEETTTTEEEECBCCCHHHHTTCCCTTTHHHHSCCEEEEEETTTT
T ss_pred c-cCCCCc-cccceEEECCCCCEEEEccCcCccccccccchhhhhhccCCEEEEEECCCC
Confidence 1 111221 112222222 232444431 23222 35689999999876
No 278
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=37.65 E-value=4.5e+02 Score=32.73 Aligned_cols=105 Identities=10% Similarity=0.032 Sum_probs=55.4
Q ss_pred CcEE-EEECCCCcEEEecCCCCCCCCccceEEEEe-CCEEEEEeccCCCCCccccEEEEEcCCCCCcEEEEEecCCCCCC
Q 002047 150 ADVH-CYDVLTNKWSRITPFGEPPTPRAAHVATAV-GTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGP 227 (975)
Q Consensus 150 ~dv~-~yD~~t~~W~~l~~~g~~P~pR~~hsa~~~-~~~iyv~GG~~~~~~~~~dv~~yD~~t~~~~W~~v~~~g~~P~~ 227 (975)
..+| .||+.+.....+.. ..... +..+.. +++.++++.. ..+++++|+.+.. -..+... ...
T Consensus 358 ~~l~~~~d~~~~~~~~l~~----~~~~~-~~~~~SpDG~~la~~~~------~~~v~~~d~~tg~--~~~~~~~---~~~ 421 (1045)
T 1k32_A 358 GDFLGIYDYRTGKAEKFEE----NLGNV-FAMGVDRNGKFAVVAND------RFEIMTVDLETGK--PTVIERS---REA 421 (1045)
T ss_dssp EEEEEEEETTTCCEEECCC----CCCSE-EEEEECTTSSEEEEEET------TSEEEEEETTTCC--EEEEEEC---SSS
T ss_pred CceEEEEECCCCCceEecC----Cccce-eeeEECCCCCEEEEECC------CCeEEEEECCCCc--eEEeccC---CCC
Confidence 3677 78888877666641 11122 222222 4455555543 2489999998764 4444311 111
Q ss_pred CcccEEEEeCCcEEEEEcCCCC-----CCCCCcEEEEECCCCCcEEEEccC
Q 002047 228 RYGHVMALVGQRYLMAIGGNDG-----KRPLADVWALDTAAKPYEWRKLEP 273 (975)
Q Consensus 228 R~~h~~~~~~~~~lyV~GG~~g-----~~~~ndv~~yDl~s~~~~W~~v~~ 273 (975)
.. ...+.-.+++.+++++.++ ......++.+|+.+. +...+..
T Consensus 422 ~v-~~~~~SpDG~~la~~~~~~~~~~~~~~~~~i~l~d~~~g--~~~~l~~ 469 (1045)
T 1k32_A 422 MI-TDFTISDNSRFIAYGFPLKHGETDGYVMQAIHVYDMEGR--KIFAATT 469 (1045)
T ss_dssp CC-CCEEECTTSCEEEEEEEECSSTTCSCCEEEEEEEETTTT--EEEECSC
T ss_pred Cc-cceEECCCCCeEEEEecCccccccCCCCCeEEEEECCCC--cEEEeeC
Confidence 11 2233333334445554322 122468999999988 7665544
No 279
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=37.55 E-value=4.7e+02 Score=29.12 Aligned_cols=104 Identities=16% Similarity=0.112 Sum_probs=56.3
Q ss_pred CcEEEEECCCCcEEEecCCCCCCCCccceEEEEe--CCEEEEEecc---CCCCCccccEEEEEcCCCCCcEEEEEecCCC
Q 002047 150 ADVHCYDVLTNKWSRITPFGEPPTPRAAHVATAV--GTMVVIQGGI---GPAGLSAEDLHVLDLTQQRPRWHRVVVQGPG 224 (975)
Q Consensus 150 ~dv~~yD~~t~~W~~l~~~g~~P~pR~~hsa~~~--~~~iyv~GG~---~~~~~~~~dv~~yD~~t~~~~W~~v~~~g~~ 224 (975)
+.+..+|+.+++-..--+.| +.. .++.- +.++|+.--. ...+...+.+.++|+.+.. .-..+...+..
T Consensus 99 ~~VsVID~~t~~vv~~I~vG-----~~P-gia~SpDgk~lyVan~~~~~~~~G~~~~~VsviD~~t~~-vv~~I~v~g~~ 171 (426)
T 3c75_H 99 TQQFVIDGSTGRILGMTDGG-----FLP-HPVAAEDGSFFAQASTVFERIARGKRTDYVEVFDPVTFL-PIADIELPDAP 171 (426)
T ss_dssp EEEEEEETTTTEEEEEEEEC-----SSC-EEEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTCC-EEEEEEETTCC
T ss_pred CeEEEEECCCCEEEEEEECC-----CCC-ceEECCCCCEEEEEeccccccccCCCCCEEEEEECCCCc-EEEEEECCCcc
Confidence 68999999998755443333 222 23332 4478877411 0111124689999999874 22333321110
Q ss_pred C--CCCcccEEEE-eCCcEEEEEcCCCCCCCCCcEEEEECCCC
Q 002047 225 P--GPRYGHVMAL-VGQRYLMAIGGNDGKRPLADVWALDTAAK 264 (975)
Q Consensus 225 P--~~R~~h~~~~-~~~~~lyV~GG~~g~~~~ndv~~yDl~s~ 264 (975)
. ....-|.+.+ -+++++||..-. ..+.|.++|+.+.
T Consensus 172 r~~~g~~P~~~~~spDGk~lyV~n~~----~~~~VsVID~~t~ 210 (426)
T 3c75_H 172 RFLVGTYQWMNALTPDNKNLLFYQFS----PAPAVGVVDLEGK 210 (426)
T ss_dssp CCCBSCCGGGSEECTTSSEEEEEECS----SSCEEEEEETTTT
T ss_pred ccccCCCcceEEEcCCCCEEEEEecC----CCCeEEEEECCCC
Confidence 0 0112233333 345588886321 2467999999988
No 280
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=37.18 E-value=3.8e+02 Score=27.95 Aligned_cols=150 Identities=13% Similarity=0.093 Sum_probs=0.0
Q ss_pred CCEEEEEeccCCCCCccccEEEEEcCCCCCcEEEEEecCCCCCCCcccEEEEeCCcEEEEEcCCCCCCCCCcEEEEECCC
Q 002047 184 GTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGPRYGHVMALVGQRYLMAIGGNDGKRPLADVWALDTAA 263 (975)
Q Consensus 184 ~~~iyv~GG~~~~~~~~~dv~~yD~~t~~~~W~~v~~~g~~P~~R~~h~~~~~~~~~lyV~GG~~g~~~~ndv~~yDl~s 263 (975)
++.+|+.+.. ...+++||+.+. ..... ..+..-++++...++.+|+... ..+++||+.+
T Consensus 60 ~~~l~~~d~~------~~~i~~~d~~~~---~~~~~-----~~~~~v~~i~~~~dg~l~v~~~-------~gl~~~d~~~ 118 (326)
T 2ghs_A 60 SGTAWWFNIL------ERELHELHLASG---RKTVH-----ALPFMGSALAKISDSKQLIASD-------DGLFLRDTAT 118 (326)
T ss_dssp TTEEEEEEGG------GTEEEEEETTTT---EEEEE-----ECSSCEEEEEEEETTEEEEEET-------TEEEEEETTT
T ss_pred CCEEEEEECC------CCEEEEEECCCC---cEEEE-----ECCCcceEEEEeCCCeEEEEEC-------CCEEEEECCC
Q ss_pred CCcEEEEccCCCCCCCCcceeEEEEEeCCeEEEecCCCCCCCCccceEEeecCCCCeEEEEECCCCCCCCcceeeEEEe-
Q 002047 264 KPYEWRKLEPEGEGPPPCMYATASARSDGLLLLCGGRDASSVPLASAYGLAKHRDGRWEWAIAPGVSPSPRYQHAAVFV- 342 (975)
Q Consensus 264 ~~~~W~~v~~~~~~P~~r~~~~a~~~~~g~lyvfGG~~~~~~~l~d~~~~~~~~~~~W~w~~~~g~~P~~R~~hs~v~~- 342 (975)
. +++.+..........+....+.-.++++|+.............+|.++ ++...... .......+.++.
T Consensus 119 g--~~~~~~~~~~~~~~~~~~~i~~d~~G~l~v~~~~~~~~~~~~~l~~~~---~g~~~~~~-----~~~~~~~~i~~s~ 188 (326)
T 2ghs_A 119 G--VLTLHAELESDLPGNRSNDGRMHPSGALWIGTMGRKAETGAGSIYHVA---KGKVTKLF-----ADISIPNSICFSP 188 (326)
T ss_dssp C--CEEEEECSSTTCTTEEEEEEEECTTSCEEEEEEETTCCTTCEEEEEEE---TTEEEEEE-----EEESSEEEEEECT
T ss_pred C--cEEEEeeCCCCCCCCCCCCEEECCCCCEEEEeCCCcCCCCceEEEEEe---CCcEEEee-----CCCcccCCeEEcC
Q ss_pred -CCEEEEEcCcCCCCCccccCCcEEEEECC--CC
Q 002047 343 -NARLHVSGGALGGGRMVEDSSSVAVLDTA--AG 373 (975)
Q Consensus 343 -~~~L~V~GG~~~~~~~~~~~~dv~~yD~~--t~ 373 (975)
+..||+.... ...|++||+. +.
T Consensus 189 dg~~lyv~~~~---------~~~I~~~d~~~~~G 213 (326)
T 2ghs_A 189 DGTTGYFVDTK---------VNRLMRVPLDARTG 213 (326)
T ss_dssp TSCEEEEEETT---------TCEEEEEEBCTTTC
T ss_pred CCCEEEEEECC---------CCEEEEEEcccccC
No 281
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=36.36 E-value=5.7e+02 Score=29.72 Aligned_cols=62 Identities=10% Similarity=-0.099 Sum_probs=33.9
Q ss_pred ccCcEEEEECCCCcEEEecCCCCCCCCccceEEEEeCCEEEEEeccCCCCCccccEEEEEcCCCCCcEEEEE
Q 002047 148 ATADVHCYDVLTNKWSRITPFGEPPTPRAAHVATAVGTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVV 219 (975)
Q Consensus 148 ~~~dv~~yD~~t~~W~~l~~~g~~P~pR~~hsa~~~~~~iyv~GG~~~~~~~~~dv~~yD~~t~~~~W~~v~ 219 (975)
....++++|+.+.+-..+..... ...+....+..-+++.++++.. .+++++|+.+.. ...+.
T Consensus 89 ~~~~i~~~d~~~~~~~~l~~~~~-~~~~~~~~~~SPdG~~la~~~~-------~~i~~~~~~~g~--~~~~~ 150 (723)
T 1xfd_A 89 YTGYYVLSKIPHGDPQSLDPPEV-SNAKLQYAGWGPKGQQLIFIFE-------NNIYYCAHVGKQ--AIRVV 150 (723)
T ss_dssp CCSEEEEEESSSCCCEECCCTTC-CSCCCSBCCBCSSTTCEEEEET-------TEEEEESSSSSC--CEEEE
T ss_pred ceeeEEEEECCCCceEeccCCcc-ccccccccEECCCCCEEEEEEC-------CeEEEEECCCCc--eEEEe
Confidence 34789999999887666654311 1111122222224444444432 379999988753 44444
No 282
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=36.35 E-value=3.3e+02 Score=26.91 Aligned_cols=154 Identities=11% Similarity=0.014 Sum_probs=72.6
Q ss_pred EEEEe-CCEEEE-EeccCCCCCccccEEEEEcCCCCCcEEEEEecCCCCCCCcccEEEEeCCcEEEEEcCCCCCCCCCcE
Q 002047 179 VATAV-GTMVVI-QGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGPRYGHVMALVGQRYLMAIGGNDGKRPLADV 256 (975)
Q Consensus 179 sa~~~-~~~iyv-~GG~~~~~~~~~dv~~yD~~t~~~~W~~v~~~g~~P~~R~~h~~~~~~~~~lyV~GG~~g~~~~ndv 256 (975)
+++.. ++++|+ .... ...+++||..+.. ..... ......-+++++..++.|||... + +.+
T Consensus 28 ~i~~~~~g~l~v~~~~~------~~~i~~~~~~~~~--~~~~~----~~~~~~p~~i~~~~~g~l~v~~~-~-----~~i 89 (270)
T 1rwi_B 28 GVAVDSAGNVYVTSEGM------YGRVVKLATGSTG--TTVLP----FNGLYQPQGLAVDGAGTVYVTDF-N-----NRV 89 (270)
T ss_dssp EEEECTTCCEEEEECSS------SCEEEEECC-------EECC----CCSCCSCCCEEECTTCCEEEEET-T-----TEE
T ss_pred ceEECCCCCEEEEccCC------CCcEEEecCCCcc--cceEe----eCCcCCcceeEECCCCCEEEEcC-C-----CEE
Confidence 34433 347887 4222 3468888876642 22221 11112234455554446888764 2 469
Q ss_pred EEEECCCCCcEEEEccCCCCCCCCcceeEEEEEeCCeEEEecCCCCCCCCccceEEeecCCCCeEEEEECCCCCCCCcce
Q 002047 257 WALDTAAKPYEWRKLEPEGEGPPPCMYATASARSDGLLLLCGGRDASSVPLASAYGLAKHRDGRWEWAIAPGVSPSPRYQ 336 (975)
Q Consensus 257 ~~yDl~s~~~~W~~v~~~~~~P~~r~~~~a~~~~~g~lyvfGG~~~~~~~l~d~~~~~~~~~~~W~w~~~~g~~P~~R~~ 336 (975)
++||+... ....+..... ..-...+...++++|+.... ...++.++.... ........+ ...-
T Consensus 90 ~~~d~~~~--~~~~~~~~~~----~~p~~i~~~~~g~l~v~~~~------~~~i~~~~~~~~-~~~~~~~~~----~~~p 152 (270)
T 1rwi_B 90 VTLAAGSN--NQTVLPFDGL----NYPEGLAVDTQGAVYVADRG------NNRVVKLAAGSK-TQTVLPFTG----LNDP 152 (270)
T ss_dssp EEECTTCS--CCEECCCCSC----SSEEEEEECTTCCEEEEEGG------GTEEEEECTTCC-SCEECCCCS----CCSC
T ss_pred EEEeCCCc--eEeeeecCCc----CCCcceEECCCCCEEEEECC------CCEEEEEECCCc-eeEeecccc----CCCc
Confidence 99999876 3333322111 11122223346788886432 123555543322 222111111 1112
Q ss_pred eeEEEe-CCEEEEEcCcCCCCCccccCCcEEEEECCCCeEE
Q 002047 337 HAAVFV-NARLHVSGGALGGGRMVEDSSSVAVLDTAAGVWC 376 (975)
Q Consensus 337 hs~v~~-~~~L~V~GG~~~~~~~~~~~~dv~~yD~~t~~W~ 376 (975)
.++++. +++|||.... ...|++||+.+..-.
T Consensus 153 ~~i~~~~~g~l~v~~~~---------~~~i~~~~~~~~~~~ 184 (270)
T 1rwi_B 153 DGVAVDNSGNVYVTDTD---------NNRVVKLEAESNNQV 184 (270)
T ss_dssp CCEEECTTCCEEEEEGG---------GTEEEEECTTTCCEE
T ss_pred eeEEEeCCCCEEEEECC---------CCEEEEEecCCCceE
Confidence 234443 4678886532 245899999877543
No 283
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=36.21 E-value=4.2e+02 Score=28.19 Aligned_cols=105 Identities=14% Similarity=0.222 Sum_probs=54.8
Q ss_pred cCcEEEEECCCCcEEEecCCCCCCCCccceEEEEe--CCEEEEEeccC---CCCCccccEEEEEcCCCCCcEEEEEecCC
Q 002047 149 TADVHCYDVLTNKWSRITPFGEPPTPRAAHVATAV--GTMVVIQGGIG---PAGLSAEDLHVLDLTQQRPRWHRVVVQGP 223 (975)
Q Consensus 149 ~~dv~~yD~~t~~W~~l~~~g~~P~pR~~hsa~~~--~~~iyv~GG~~---~~~~~~~dv~~yD~~t~~~~W~~v~~~g~ 223 (975)
-+.++.||..+++-...-+.+ ... .++.. +..+|+..-.. ..+...+.+.+||+.+.. ....++....
T Consensus 30 d~~v~v~D~~t~~~~~~i~~g-----~~p-~i~~spdg~~lyv~~~~~~~~~~g~~~~~v~v~d~~t~~-~~~~i~~~~~ 102 (361)
T 2oiz_A 30 ESRVHVYDYTNGKFLGMVPTA-----FNG-HVQVSNDGKKIYTMTTYHERITRGKRSDVVEVWDADKLT-FEKEISLPPK 102 (361)
T ss_dssp GCEEEEEETTTCCEEEEEECC-----EEE-EEEECTTSSEEEEEEEEETTSSSSCEEEEEEEEETTTCC-EEEEEEECTT
T ss_pred cCeEEEEECCCCeEEEEecCC-----CCC-ceEECCCCCEEEEEEecccccccCCCCCEEEEEECcCCc-EEEEEEcCcc
Confidence 357889998887654332222 222 23333 34888875321 112234679999998753 2334432110
Q ss_pred CC-CCCcccEEEEe-CCcEEEEEcCCCCCCCCCcEEEEECCCC
Q 002047 224 GP-GPRYGHVMALV-GQRYLMAIGGNDGKRPLADVWALDTAAK 264 (975)
Q Consensus 224 ~P-~~R~~h~~~~~-~~~~lyV~GG~~g~~~~ndv~~yDl~s~ 264 (975)
.. ....-+.+++- ++++||+.... ..+.+.+||+.+.
T Consensus 103 ~~~~g~~p~~i~~spdg~~l~v~n~~----~~~~v~v~d~~~~ 141 (361)
T 2oiz_A 103 RVQGLNYDGLFRQTTDGKFIVLQNAS----PATSIGIVDVAKG 141 (361)
T ss_dssp BCCBCCCGGGEEECTTSSEEEEEEES----SSEEEEEEETTTT
T ss_pred ccccCCCcceEEECCCCCEEEEECCC----CCCeEEEEECCCC
Confidence 00 11122333332 45578886321 1367999999887
No 284
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=35.90 E-value=3.9e+02 Score=27.74 Aligned_cols=64 Identities=13% Similarity=-0.020 Sum_probs=38.6
Q ss_pred CEEEEEeccCCCCCccccEEEEEcCCCCCcEEEEEecCCCCCCCcccEEEEeCCcEEEEEcCCCCCCCCCcEEEEECCCC
Q 002047 185 TMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGPRYGHVMALVGQRYLMAIGGNDGKRPLADVWALDTAAK 264 (975)
Q Consensus 185 ~~iyv~GG~~~~~~~~~dv~~yD~~t~~~~W~~v~~~g~~P~~R~~h~~~~~~~~~lyV~GG~~g~~~~ndv~~yDl~s~ 264 (975)
+.+++.|+. ...+.+||+.+.. -.... .......-.+++...++.+++.|+.++ .+..||+.+.
T Consensus 139 ~~~l~s~s~------dg~i~~wd~~~~~--~~~~~---~~~~~~~i~~~~~~pdg~~lasg~~dg-----~i~iwd~~~~ 202 (343)
T 3lrv_A 139 TEYFIWADN------RGTIGFQSYEDDS--QYIVH---SAKSDVEYSSGVLHKDSLLLALYSPDG-----ILDVYNLSSP 202 (343)
T ss_dssp CCEEEEEET------TCCEEEEESSSSC--EEEEE---CCCSSCCCCEEEECTTSCEEEEECTTS-----CEEEEESSCT
T ss_pred CCEEEEEeC------CCcEEEEECCCCc--EEEEE---ecCCCCceEEEEECCCCCEEEEEcCCC-----EEEEEECCCC
Confidence 456666764 3568999998764 22222 111121233444444557888887665 6889999876
No 285
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=34.67 E-value=1.3e+02 Score=35.31 Aligned_cols=81 Identities=20% Similarity=0.291 Sum_probs=51.8
Q ss_pred cccEEEEEcCCCCCcEEEEEecCCCCCCCcccEEEEeCCcEEEEEcCCCCCCCCCcEEEEECCCCCcEEEEccCCCCCCC
Q 002047 200 AEDLHVLDLTQQRPRWHRVVVQGPGPGPRYGHVMALVGQRYLMAIGGNDGKRPLADVWALDTAAKPYEWRKLEPEGEGPP 279 (975)
Q Consensus 200 ~~dv~~yD~~t~~~~W~~v~~~g~~P~~R~~h~~~~~~~~~lyV~GG~~g~~~~ndv~~yDl~s~~~~W~~v~~~~~~P~ 279 (975)
...++.+|+.+....|+... +.+..+..++..++ .+|+ |..+ ..++.||.++....|+.-.+.+.
T Consensus 465 ~G~l~A~D~~tG~~~W~~~~-----~~~~~~g~~~tagg-lvf~-g~~d-----g~l~A~D~~tG~~lW~~~~~~g~--- 529 (582)
T 1flg_A 465 VGSLRAMDPVSGKVVWEHKE-----HLPLWAGVLATAGN-LVFT-GTGD-----GYFKAFDAKSGKELWKFQTGSGI--- 529 (582)
T ss_dssp SEEEEEECTTTCCEEEEEEE-----SSCCCSCCEEETTT-EEEE-ECTT-----SEEEEEETTTCCEEEEEECSSCC---
T ss_pred cceEEEEECCCCCEEEEecC-----CCCCcccceEeCCC-EEEE-ECCC-----CcEEEEECCCCCEEEEecCCCCc---
Confidence 35689999998877798754 23444444444444 5666 5433 47899999998888987654332
Q ss_pred CcceeEEEEEeCCeEEEe
Q 002047 280 PCMYATASARSDGLLLLC 297 (975)
Q Consensus 280 ~r~~~~a~~~~~g~lyvf 297 (975)
....++...+++.||.
T Consensus 530 --~a~P~~y~~~G~qYv~ 545 (582)
T 1flg_A 530 --VSPPITWEQDGEQYLG 545 (582)
T ss_dssp --CSCCEEEEETTEEEEE
T ss_pred --ccCceEEEECCEEEEE
Confidence 1222333468888876
No 286
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=34.34 E-value=4.1e+02 Score=28.69 Aligned_cols=147 Identities=16% Similarity=0.158 Sum_probs=73.8
Q ss_pred CCEEEEEeccCCCCCccccEEEEEcCCCCC-cEEEEEecCCCCCCCcccEEE-Ee-CCcEEEEEcCCCCCCCCCcEEEEE
Q 002047 184 GTMVVIQGGIGPAGLSAEDLHVLDLTQQRP-RWHRVVVQGPGPGPRYGHVMA-LV-GQRYLMAIGGNDGKRPLADVWALD 260 (975)
Q Consensus 184 ~~~iyv~GG~~~~~~~~~dv~~yD~~t~~~-~W~~v~~~g~~P~~R~~h~~~-~~-~~~~lyV~GG~~g~~~~ndv~~yD 260 (975)
++.+||.+... ...++++++..... -|-.-. +....|.+.... +. +++.|++..+ . ..+++||
T Consensus 147 ~GnaYVt~s~~-----~~~I~rV~pdG~~~~~~~~~~---~~~~~~~G~nGIv~~pdg~~Liv~~~-~-----g~L~~fD 212 (334)
T 2p9w_A 147 DGNSYVAFALG-----MPAIARVSADGKTVSTFAWES---GNGGQRPGYSGITFDPHSNKLIAFGG-P-----RALTAFD 212 (334)
T ss_dssp TSCEEEEEEES-----SCEEEEECTTSCCEEEEEECC---CCSSSCCSCSEEEEETTTTEEEEESS-S-----SSEEEEE
T ss_pred CCCEEEeCCCC-----CCeEEEEeCCCCEEeeeeecC---CCcccccCcceEEEeCCCCEEEEEcC-C-----CeEEEEc
Confidence 35899976642 14589999876421 143211 223345555444 44 2446777765 3 4799999
Q ss_pred CCCCCcEEEEccCC--CCC-CCCcceeEEEEEeCCeEEEecCCCCCCCCccceEEeecCCCCeEEEEECCCCCCC---Cc
Q 002047 261 TAAKPYEWRKLEPE--GEG-PPPCMYATASARSDGLLLLCGGRDASSVPLASAYGLAKHRDGRWEWAIAPGVSPS---PR 334 (975)
Q Consensus 261 l~s~~~~W~~v~~~--~~~-P~~r~~~~a~~~~~g~lyvfGG~~~~~~~l~d~~~~~~~~~~~W~w~~~~g~~P~---~R 334 (975)
+.+ +..| .+... +.. ...........-.+|+++++.-. .+..+.+... ++ |.-....+..|. ++
T Consensus 213 ~~~-pv~~-~v~~~~~G~~~~~~~~dgilp~~~~G~vllV~~~------~~~~~~l~S~-Dg-W~sa~~~g~~~~~~~~~ 282 (334)
T 2p9w_A 213 VSK-PYAW-PEPVKINGDFGTLSGTEKIVTVPVGNESVLVGAR------APYAISFRSW-DN-WKSANIKKTKRSELQNS 282 (334)
T ss_dssp CSS-SSCC-CEECEESSCCCCCTTEEEEEEEEETTEEEEEEEE------TTEEEEEECS-ST-TSEEEEEEEECGGGGSS
T ss_pred CCC-Ccce-eecccccCCcccccCcccccccccCCEEEEEEcC------CCCEEEEECC-CC-cceeEEeeeecCccccC
Confidence 984 3344 22211 110 00111111122357777554321 1334555333 33 765555544333 34
Q ss_pred ceeeEEE----eCCEEEEEcCcCC
Q 002047 335 YQHAAVF----VNARLHVSGGALG 354 (975)
Q Consensus 335 ~~hs~v~----~~~~L~V~GG~~~ 354 (975)
...+.++ .+++||++.++-.
T Consensus 283 g~tt~t~~~~~~~~~iYvv~~~f~ 306 (334)
T 2p9w_A 283 GFTAVADYYQGSEQGLYAVSAFFD 306 (334)
T ss_dssp CEEEEEEEEETTEEEEEEEECCGG
T ss_pred ceeEEEEeccccCCeEEEEeeecC
Confidence 3334444 5789999987643
No 287
>3of7_A Regulator of chromosome condensation; beta-propeller, guanine nucleotide exchange factor (GEF), GS histones, nucleus, cell cycle; 1.90A {Saccharomyces cerevisiae}
Probab=33.01 E-value=2e+02 Score=32.37 Aligned_cols=63 Identities=21% Similarity=0.202 Sum_probs=35.1
Q ss_pred cccEEEEeCCcEEEEEcCCCCCC----C-CCc-EEEEEC------CCCCcEEEEccCCCCCCCCcceeEEEEEeCCeEEE
Q 002047 229 YGHVMALVGQRYLMAIGGNDGKR----P-LAD-VWALDT------AAKPYEWRKLEPEGEGPPPCMYATASARSDGLLLL 296 (975)
Q Consensus 229 ~~h~~~~~~~~~lyV~GG~~g~~----~-~nd-v~~yDl------~s~~~~W~~v~~~~~~P~~r~~~~a~~~~~g~lyv 296 (975)
..|++++..++.+|.+|-..... . ..+ ....-+ ... .+..+.. ...|+++...++.+|.
T Consensus 266 ~~hs~alt~~G~v~~wG~n~~GqlG~~~~~~~~~~~~~P~~v~~~~~~--~i~~ia~-------G~~hs~~lt~~G~v~~ 336 (473)
T 3of7_A 266 ENHCFALTKDNKLVSWGLNQFGQCGVSEDVEDGALVTKPKRLALPDNV--VIRSIAA-------GEHHSLILSQDGDLYS 336 (473)
T ss_dssp SSEEEEEETTSCEEEEEECTTSTTCCCSCCCTTCEEEEEEECCCCTTC--CEEEEEE-------CSSEEEEEETTSCEEE
T ss_pred CCeEEEEecCCCEEEeCCCCCCCcCCCCcccCCceeeccccccccCCc--cEEEEEe-------CCCeEEEEeCCCeEEE
Confidence 57888888877999999542111 0 000 011111 111 2333332 2467777788899999
Q ss_pred ecCC
Q 002047 297 CGGR 300 (975)
Q Consensus 297 fGG~ 300 (975)
+|-.
T Consensus 337 wG~n 340 (473)
T 3of7_A 337 CGRL 340 (473)
T ss_dssp EEEC
T ss_pred EECC
Confidence 9854
No 288
>3kci_A Probable E3 ubiquitin-protein ligase HERC2; WD40, RCC1, structural genomics consortium, SGC, coiled coil, metal-binding, phosphoprotein; 1.80A {Homo sapiens}
Probab=32.81 E-value=5e+02 Score=28.06 Aligned_cols=19 Identities=16% Similarity=0.144 Sum_probs=15.4
Q ss_pred cccEEEEeCCcEEEEEcCC
Q 002047 229 YGHVMALVGQRYLMAIGGN 247 (975)
Q Consensus 229 ~~h~~~~~~~~~lyV~GG~ 247 (975)
..|++++..++.+|.+|-.
T Consensus 168 ~~hs~alt~~G~v~~wG~n 186 (389)
T 3kci_A 168 GAHSACVTAAGDLYTWGKG 186 (389)
T ss_dssp SSEEEEEETTSCEEEEECC
T ss_pred cCeEEEEeCCCeEEEeCCC
Confidence 5788888887799999954
No 289
>2cn3_A Xyloglucanase, beta-1,4-xyloglucan hydrolase; glycosylhydrolase, family GH74; HET: GLC BGC GAL; 1.95A {Clostridium thermocellum} PDB: 2cn2_A*
Probab=32.67 E-value=7e+02 Score=29.69 Aligned_cols=212 Identities=18% Similarity=0.236 Sum_probs=100.2
Q ss_pred cEEEEECCCCcEEEecCCCCCCCCc----c-ceEEEEe---CCEEEEEeccCCCCCccccEEEEEcCCCCCcEEEEEecC
Q 002047 151 DVHCYDVLTNKWSRITPFGEPPTPR----A-AHVATAV---GTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQG 222 (975)
Q Consensus 151 dv~~yD~~t~~W~~l~~~g~~P~pR----~-~hsa~~~---~~~iyv~GG~~~~~~~~~dv~~yD~~t~~~~W~~v~~~g 222 (975)
.+|+.+-...+|+.+... +..+ . -+++++. .+.||+..|............+|-....-..|+.+...-
T Consensus 46 gv~rS~D~G~tW~~i~~~---~~~~~~~~~~i~~i~~dp~~~~~v~v~~~~~~~~~~~~~~~l~~S~DgG~TW~~~~~~~ 122 (737)
T 2cn3_A 46 GAYRWDPSTETWIPLLDH---FQMDEYSYYGVESIATDPVDPNRVYIVAGMYTNDWLPNMGAILRSTDRGETWEKTILPF 122 (737)
T ss_dssp CEEEEETTTTEEEECCTT---CCGGGGGGGCEEEEEECSSSTTCEEEEECSCSSSSSCCCCEEEEESSSSSSCEEEECSS
T ss_pred cEEEeCCCCCCEEECcCc---cCcccccCCCcceEEeCCCCCCEEEEEecccccccccCCccEEEeCCCCCCcccCCCCc
Confidence 578888888999997653 1111 1 2233333 247888765321111011223343333223599886321
Q ss_pred ----CCCCCCcccEEEEe--CCcEEEEEcCCCCCCCCCcEEEEECCCCCcEEEEccCCCCCC-----CCc------ceeE
Q 002047 223 ----PGPGPRYGHVMALV--GQRYLMAIGGNDGKRPLADVWALDTAAKPYEWRKLEPEGEGP-----PPC------MYAT 285 (975)
Q Consensus 223 ----~~P~~R~~h~~~~~--~~~~lyV~GG~~g~~~~ndv~~yDl~s~~~~W~~v~~~~~~P-----~~r------~~~~ 285 (975)
.+|.....+.+++. +.+.||+... .+ ..+|+=+-.-. +|+++..++... +.+ ...+
T Consensus 123 ~~~~~~~g~~~~~~l~~~p~~~~~v~~g~~-~g----~gl~~S~DgG~--tW~~~~~~~~~~~~~~~p~~~~~~~~~g~~ 195 (737)
T 2cn3_A 123 KMGGNMPGRSMGERLAIDPNDNRILYLGTR-CG----NGLWRSTDYGV--TWSKVESFPNPGTYIYDPNFDYTKDIIGVV 195 (737)
T ss_dssp CCCTTSTTTTSCCCEEECSSCTTCEEEECS-TT----CCEEEESSTTS--SCEECTTCCCCCCCBSCTTSTTTCSBCCEE
T ss_pred ccCCCcCcccccceEEECCCCCCEEEEeec-cC----CcEEEeCCCCc--ceecccCCCCCcccccCcccccccCCCCEE
Confidence 12222123455443 2235666431 11 24555433344 899887543210 000 0111
Q ss_pred EEEEe---------CCeEEEecCCCCCCCCccceEEeecCCCCeEEEEECCCCCCCCcceeeEEEe-CCEEEEEcCcCCC
Q 002047 286 ASARS---------DGLLLLCGGRDASSVPLASAYGLAKHRDGRWEWAIAPGVSPSPRYQHAAVFV-NARLHVSGGALGG 355 (975)
Q Consensus 286 a~~~~---------~g~lyvfGG~~~~~~~l~d~~~~~~~~~~~W~w~~~~g~~P~~R~~hs~v~~-~~~L~V~GG~~~~ 355 (975)
.+.+. .+.||+.-+... ..+|+-.+... +|..+.+. |.....|.+++. ++.+|+..+....
T Consensus 196 ~v~~dp~~~~~~~~~~~v~~~~~~~~-----~~v~~S~DgG~---tW~~~~~~-p~~~~~~~~~~~~~~~l~~~~~d~~g 266 (737)
T 2cn3_A 196 WVVFDKSSSTPGNPTKTIYVGVADKN-----ESIYRSTDGGV---TWKAVPGQ-PKGLLPHHGVLASNGMLYITYGDTCG 266 (737)
T ss_dssp EEEECGGGSCTTSCCSCEEEEESCSS-----CCEEEESSTTS---CCEECTTC-CCSSEEEEEEECTTSEEEEEEESSCC
T ss_pred EEEcCCCCcccCCCCCEEEEEecCCC-----ccEEEEcCCCC---ceEECCCC-CCcccceEEEECCCCeEEEEecCCCC
Confidence 12221 126766422111 12444333323 45666644 444444544443 6788887543211
Q ss_pred CCccccCCcEEEEECCCCeEEEcccC
Q 002047 356 GRMVEDSSSVAVLDTAAGVWCDTKSV 381 (975)
Q Consensus 356 ~~~~~~~~dv~~yD~~t~~W~~v~~~ 381 (975)
.........||+++-...+|+.+...
T Consensus 267 ~y~~~~~g~v~~s~d~G~tW~~i~~~ 292 (737)
T 2cn3_A 267 PYDGNGKGQVWKFNTRTGEWIDITPI 292 (737)
T ss_dssp SSCCSCCEEEEEEETTTCCEEECCSS
T ss_pred ccccccCceEEEEeCCCCCEEEccCC
Confidence 10001245699999999999998765
No 290
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=32.36 E-value=5.3e+02 Score=28.14 Aligned_cols=194 Identities=13% Similarity=0.073 Sum_probs=94.0
Q ss_pred CcEEEEECCCCcEEEecCCCCCCCCccceEEEEe--CCEEEEEeccCCCCCccccEEEEEcCCCCCcEEEEEecCCCCCC
Q 002047 150 ADVHCYDVLTNKWSRITPFGEPPTPRAAHVATAV--GTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGP 227 (975)
Q Consensus 150 ~dv~~yD~~t~~W~~l~~~g~~P~pR~~hsa~~~--~~~iyv~GG~~~~~~~~~dv~~yD~~t~~~~W~~v~~~g~~P~~ 227 (975)
..+++||+.++.-..+...+ .. .+ .+.. ++.||+....+ ...++++|..... ....+..... +..
T Consensus 152 ~~I~~id~~~g~~~~~~~~~--~~---~~-ia~~~~g~~l~~~d~~~-----~~~I~~~d~~~~~-~~~~~g~~~~-~~~ 218 (409)
T 3hrp_A 152 PRVRLISVDDNKVTTVHPGF--KG---GK-PAVTKDKQRVYSIGWEG-----THTVYVYMKASGW-APTRIGQLGS-TFS 218 (409)
T ss_dssp TEEEEEETTTTEEEEEEETC--CB---CB-CEECTTSSEEEEEBSST-----TCEEEEEEGGGTT-CEEEEEECCT-TSC
T ss_pred CcEEEEECCCCEEEEeeccC--CC---Cc-eeEecCCCcEEEEecCC-----CceEEEEEcCCCc-eeEEeeeccc-hhc
Confidence 46788898887766654332 11 22 2332 34666665421 1279999987652 2233311111 012
Q ss_pred CcccEEEEeC-CcEEEEEcCCCCCCCCCcEEEEECCCCCcEEEEccCCCCCCCCcce--eEEEEEe-CCeEEEecCCCCC
Q 002047 228 RYGHVMALVG-QRYLMAIGGNDGKRPLADVWALDTAAKPYEWRKLEPEGEGPPPCMY--ATASARS-DGLLLLCGGRDAS 303 (975)
Q Consensus 228 R~~h~~~~~~-~~~lyV~GG~~g~~~~ndv~~yDl~s~~~~W~~v~~~~~~P~~r~~--~~a~~~~-~g~lyvfGG~~~~ 303 (975)
..-+.+++.. ++.||+.-. ...+++||+.+. ....+............ ...+... ++.||+....
T Consensus 219 ~~p~~iav~p~~g~lyv~d~------~~~I~~~d~~~~--~~~~~~~~~~~g~~~~~P~~~ia~~p~~g~lyv~d~~--- 287 (409)
T 3hrp_A 219 GKIGAVALDETEEWLYFVDS------NKNFGRFNVKTQ--EVTLIKQLELSGSLGTNPGPYLIYYFVDSNFYMSDQN--- 287 (409)
T ss_dssp SCCCBCEECTTSSEEEEECT------TCEEEEEETTTC--CEEEEEECCCCSCCCCSSCCEEEEETTTTEEEEEETT---
T ss_pred CCcEEEEEeCCCCeEEEEEC------CCcEEEEECCCC--CEEEEecccccCCCCCCccccEEEeCCCCEEEEEeCC---
Confidence 2224444444 558999432 247999999877 44443211111111111 1233333 6899997432
Q ss_pred CCCccceEEeecCCCCeEEEEECCC-CCCC-------C--cceeeEEEe-CCEEEEEcCcCCCCCccccCCcEEEEECCC
Q 002047 304 SVPLASAYGLAKHRDGRWEWAIAPG-VSPS-------P--RYQHAAVFV-NARLHVSGGALGGGRMVEDSSSVAVLDTAA 372 (975)
Q Consensus 304 ~~~l~d~~~~~~~~~~~W~w~~~~g-~~P~-------~--R~~hs~v~~-~~~L~V~GG~~~~~~~~~~~~dv~~yD~~t 372 (975)
.+.++.++.... .....-.+ .... . ..-.++++. ++.|||.-.. ....|.+||+.+
T Consensus 288 ---~~~I~~~~~~g~--~~~~~g~~~~~g~~dg~~~~~~~~~P~gia~d~dG~lyvad~~--------~~~~I~~~~~~~ 354 (409)
T 3hrp_A 288 ---LSSVYKITPDGE--CEWFCGSATQKTVQDGLREEALFAQPNGMTVDEDGNFYIVDGF--------KGYCLRKLDILD 354 (409)
T ss_dssp ---TTEEEEECTTCC--EEEEEECTTCCSCBCEEGGGCBCSSEEEEEECTTCCEEEEETT--------TTCEEEEEETTT
T ss_pred ---CCEEEEEecCCC--EEEEEeCCCCCCcCCCcccccEeCCCeEEEEeCCCCEEEEeCC--------CCCEEEEEECCC
Confidence 235666654322 22111111 0000 0 112233333 4678887430 134589999878
Q ss_pred CeEEEccc
Q 002047 373 GVWCDTKS 380 (975)
Q Consensus 373 ~~W~~v~~ 380 (975)
.....+..
T Consensus 355 G~v~~~~g 362 (409)
T 3hrp_A 355 GYVSTVAG 362 (409)
T ss_dssp TEEEEEEE
T ss_pred CEEEEEeC
Confidence 87665543
No 291
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=31.81 E-value=12 Score=41.22 Aligned_cols=143 Identities=10% Similarity=0.066 Sum_probs=0.0
Q ss_pred CceEEEEcccCCCCCCCccCCEEEEEcCCCCCCCCCCCCCCCCCCCCcccccccccCcEEEEECCCCc--EEEecCCCCC
Q 002047 94 GHTLTAVAAVGEEGTPGYIGPRLILFGGATALEGNSAASGTPSSAGSAGIRLAGATADVHCYDVLTNK--WSRITPFGEP 171 (975)
Q Consensus 94 ght~t~~~~~~~~~~~~~~~~~lyvfGG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dv~~yD~~t~~--W~~l~~~g~~ 171 (975)
|++.-++ .+..+++|+ ....++.+|..+++ |+.-. .
T Consensus 1 g~ssP~v------------~~~~v~~gs--------------------------~dg~v~a~d~~tG~~~W~~~~-~--- 38 (369)
T 2hz6_A 1 GSSTVTL------------PETLLFVST--------------------------LDGSLHAVSKRTGSIKWTLKE-D--- 38 (369)
T ss_dssp -------------------CTTEEEEEE--------------------------TTSEEEEEETTTCCEEEEEEC-C---
T ss_pred CCCCCee------------eCCEEEEEc--------------------------CCCEEEEEECCCCCEEEEecC-C---
Q ss_pred CCCccceEEEEeCCEEEEEeccCCCCCccccEEEEEcCCCCCcEEEEEecCCCCCCCcccEEEEeCCcEEEEEcCCCCCC
Q 002047 172 PTPRAAHVATAVGTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGPRYGHVMALVGQRYLMAIGGNDGKR 251 (975)
Q Consensus 172 P~pR~~hsa~~~~~~iyv~GG~~~~~~~~~dv~~yD~~t~~~~W~~v~~~g~~P~~R~~h~~~~~~~~~lyV~GG~~g~~ 251 (975)
....+.++.++.+|+.|+. ...++.+|..+....|..-. ..+.......+...++ .+++|+.++
T Consensus 39 ---~~~s~p~~~~g~~~v~~s~------dg~l~a~d~~tG~~~w~~~~---~~~~~~~~sp~~~~~~--~v~~g~~dg-- 102 (369)
T 2hz6_A 39 ---PVLQVPTHVEEPAFLPDPN------DGSLYTLGSKNNEGLTKLPF---TIPELVQASPCRSSDG--ILYMGKKQD-- 102 (369)
T ss_dssp ---CSCCCC-----CCEEECTT------TCCEEEC-----CCSEECSC---CHHHHHTTCSCC-------CCCCEEEE--
T ss_pred ---CceecceEcCCCEEEEeCC------CCEEEEEECCCCceeeeeec---cCccccccCceEecCC--EEEEEeCCC--
Q ss_pred CCCcEEEEECCCCCcEEEEccCCCCCCCCcceeEEEEEeCCeEEEe
Q 002047 252 PLADVWALDTAAKPYEWRKLEPEGEGPPPCMYATASARSDGLLLLC 297 (975)
Q Consensus 252 ~~ndv~~yDl~s~~~~W~~v~~~~~~P~~r~~~~a~~~~~g~lyvf 297 (975)
.++.||+.+....|+.-......-.+......+...++.|+++
T Consensus 103 ---~v~a~D~~tG~~~w~~~~~~~~~~~p~~~~v~~~~~dg~v~a~ 145 (369)
T 2hz6_A 103 ---IWYVIDLLTGEKQQTLSSAFADSLSPSTSLLYLGRTEYTITMY 145 (369)
T ss_dssp ---EEEEECCC----------------------EEEEEEEEEEECC
T ss_pred ---EEEEEECCCCcEEEEecCCCcccccccCCEEEEEecCCEEEEE
No 292
>1su3_A Interstitial collagenase; prodomain, hemopexin domain, exocite, structural proteomics in europe, spine, structural genomics, hydrolase; HET: EPE; 2.20A {Homo sapiens} SCOP: a.20.1.2 b.66.1.1 d.92.1.11 PDB: 2clt_A 1fbl_A*
Probab=31.68 E-value=3.7e+02 Score=30.34 Aligned_cols=106 Identities=8% Similarity=0.061 Sum_probs=53.6
Q ss_pred CCEEEEEeccCCCCCccccEEEEEcCCCCCcE-EEEE-ecCCCCC--CCcccEEEEeCCcEEEEEcCCCCCCCCCcEEEE
Q 002047 184 GTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRW-HRVV-VQGPGPG--PRYGHVMALVGQRYLMAIGGNDGKRPLADVWAL 259 (975)
Q Consensus 184 ~~~iyv~GG~~~~~~~~~dv~~yD~~t~~~~W-~~v~-~~g~~P~--~R~~h~~~~~~~~~lyV~GG~~g~~~~ndv~~y 259 (975)
++++|+|=| +.+|+|+-.+-...+ ..+. .. .+|. ..-..+...-.++++|+|-| +..|+|
T Consensus 318 ~g~~~fFKg--------~~~W~~~~~~~~~gyP~~i~~~~-g~P~~~~~IDAA~~~~~~~k~yfFkG-------~~yw~y 381 (450)
T 1su3_A 318 RDEVRFFKG--------NKYWAVQGQNVLHGYPKDIYSSF-GFPRTVKHIDAALSEENTGKTYFFVA-------NKYWRY 381 (450)
T ss_dssp GTEEEEEET--------TEEEEEETTEECTTCSEEHHHHH-CCCTTCCCCCEEEEETTTTEEEEEET-------TEEEEE
T ss_pred CCeEEEEeC--------CEEEEecCCcccCCCceeeehhh-cCCCCCCccceEEEEcCCCeEEEEeC-------CEEEEE
Confidence 579999976 367888743211011 1111 01 1332 12222322223458999976 579999
Q ss_pred ECCCCCcEE-----EEcc-CCCCCCCCcceeEEEEEeCCeEEEecCCCCCCCCccceEEeecCCC
Q 002047 260 DTAAKPYEW-----RKLE-PEGEGPPPCMYATASARSDGLLLLCGGRDASSVPLASAYGLAKHRD 318 (975)
Q Consensus 260 Dl~s~~~~W-----~~v~-~~~~~P~~r~~~~a~~~~~g~lyvfGG~~~~~~~l~d~~~~~~~~~ 318 (975)
|..+. +- +.+. ..+..| ....+|. ..++++|+|-| +..|+|+..+.
T Consensus 382 d~~~~--~~~~gYPk~I~~~fpgip--~~iDAA~-~~~g~~YFFkg--------~~ywr~d~~~~ 433 (450)
T 1su3_A 382 DEYKR--SMDPGYPKMIAHDFPGIG--HKVDAVF-MKDGFFYFFHG--------TRQYKFDPKTK 433 (450)
T ss_dssp ETTTT--EECSSCSEEHHHHSTTSC--SCCSEEE-EETTEEEEEET--------TEEEEEETTTT
T ss_pred eCCCc--cccCCCCcchhhcCCCCC--CCccEEE-EcCCeEEEEeC--------CEEEEEECCcc
Confidence 98754 21 1121 111111 2233333 46899999966 34577765543
No 293
>1pex_A Collagenase-3, MMP-13; C-terminal hemopexin-like domain of matrix- metalloproteinase, metalloprotease; 2.70A {Homo sapiens} SCOP: b.66.1.1
Probab=31.35 E-value=4e+02 Score=26.46 Aligned_cols=105 Identities=10% Similarity=0.150 Sum_probs=54.0
Q ss_pred CCEEEEEeccCCCCCccccEEEEEcCCCCCcE-EEEEecCCCCCC--CcccEEEEe-CCcEEEEEcCCCCCCCCCcEEEE
Q 002047 184 GTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRW-HRVVVQGPGPGP--RYGHVMALV-GQRYLMAIGGNDGKRPLADVWAL 259 (975)
Q Consensus 184 ~~~iyv~GG~~~~~~~~~dv~~yD~~t~~~~W-~~v~~~g~~P~~--R~~h~~~~~-~~~~lyV~GG~~g~~~~ndv~~y 259 (975)
++++|+|=| +.+|+|+-.+-...+ ..+... .+|.. .-. ++... .++++|+|-| +..|+|
T Consensus 79 ~~~iyfFkG--------~~~w~~~~~~~~~gyPk~I~~~-GlP~~~~~ID-AA~~~~~~gk~yfFkG-------~~ywr~ 141 (207)
T 1pex_A 79 HDLIFIFRG--------RKFWALNGYDILEGYPKKISEL-GLPKEVKKIS-AAVHFEDTGKTLLFSG-------NQVWRY 141 (207)
T ss_dssp TTEEEEEET--------TEEEEESTTCCCTTCSEESTTT-TCCTTCCCCC-EEEECTTTSEEEEEET-------TEEEEE
T ss_pred CCcEEEEcc--------CEEEEEeCCeeccCCceecccc-CCCCCCcccc-EEEEeCCCCEEEEEeC-------CEEEEE
Confidence 479999977 367888743221111 112111 13431 222 23233 3358999977 578999
Q ss_pred ECCCCCcEEE-----Ecc-CCCCCCCCcceeEEEEEeCCeEEEecCCCCCCCCccceEEeecCCC
Q 002047 260 DTAAKPYEWR-----KLE-PEGEGPPPCMYATASARSDGLLLLCGGRDASSVPLASAYGLAKHRD 318 (975)
Q Consensus 260 Dl~s~~~~W~-----~v~-~~~~~P~~r~~~~a~~~~~g~lyvfGG~~~~~~~l~d~~~~~~~~~ 318 (975)
|..++ +=. .+. .-...| ....+|. ..++++|+|-| +..|.|+....
T Consensus 142 d~~~~--~~d~gyPr~i~~~~~Gip--~~iDaAf-~~~g~~YfFkg--------~~y~rf~~~~~ 193 (207)
T 1pex_A 142 DDTNH--IMDKDYPRLIEEDFPGIG--DKVDAVY-EKNGYIYFFNG--------PIQFEYSIWSN 193 (207)
T ss_dssp ETTTT--EECSSCCCBHHHHSTTSC--SCCSEEE-EETTEEEEEET--------TEEEEEETTTT
T ss_pred eCcCc--cccCCCCccHHHcCCCCC--CCccEEE-EcCCcEEEEEC--------CEEEEEeCCcc
Confidence 99765 211 000 000111 2233333 45899999966 34566665443
No 294
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=30.72 E-value=6e+02 Score=28.70 Aligned_cols=107 Identities=14% Similarity=0.107 Sum_probs=52.7
Q ss_pred CCEEEEEeccCCCCCccccEEEEEcCCCCCcEEEEEecCCCCCCCcccEEEEeCCcEEEEEcCCCCCCCCCcEEEEECCC
Q 002047 184 GTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGPRYGHVMALVGQRYLMAIGGNDGKRPLADVWALDTAA 263 (975)
Q Consensus 184 ~~~iyv~GG~~~~~~~~~dv~~yD~~t~~~~W~~v~~~g~~P~~R~~h~~~~~~~~~lyV~GG~~g~~~~ndv~~yDl~s 263 (975)
++.+++..+.. +.+.+||+.+.. ...+... +. ......-++ +.+++++.+... ..++|++|+.+
T Consensus 121 g~~~~~~s~~~------~~~~l~d~~~g~--~~~l~~~---~~---~~~~~spDG-~~la~~~~~~~~-~~~i~~~d~~~ 184 (582)
T 3o4h_A 121 GEAVVFTGATE------DRVALYALDGGG--LRELARL---PG---FGFVSDIRG-DLIAGLGFFGGG-RVSLFTSNLSS 184 (582)
T ss_dssp SSCEEEEEECS------SCEEEEEEETTE--EEEEEEE---SS---CEEEEEEET-TEEEEEEEEETT-EEEEEEEETTT
T ss_pred CCeEEEEecCC------CCceEEEccCCc--EEEeecC---CC---ceEEECCCC-CEEEEEEEcCCC-CeEEEEEcCCC
Confidence 44555554431 334577887753 5555421 22 222222344 445544443221 24599999998
Q ss_pred CCcEEEEccCCCCCCCCcceeEEEEEeCCeEEEecCCCCCCCCccceEEeecCC
Q 002047 264 KPYEWRKLEPEGEGPPPCMYATASARSDGLLLLCGGRDASSVPLASAYGLAKHR 317 (975)
Q Consensus 264 ~~~~W~~v~~~~~~P~~r~~~~a~~~~~g~lyvfGG~~~~~~~l~d~~~~~~~~ 317 (975)
. +++.+..... .....+...+|+.++.+..++ ...++.++...
T Consensus 185 g--~~~~l~~~~~-----~~~~~~~SpDG~~l~~~~~~~----~~~i~~~d~~~ 227 (582)
T 3o4h_A 185 G--GLRVFDSGEG-----SFSSASISPGMKVTAGLETAR----EARLVTVDPRD 227 (582)
T ss_dssp C--CCEEECCSSC-----EEEEEEECTTSCEEEEEECSS----CEEEEEECTTT
T ss_pred C--CceEeecCCC-----ccccceECCCCCEEEEccCCC----eeEEEEEcCCC
Confidence 8 6776643321 223333444666555433222 24566665543
No 295
>3ba0_A Macrophage metalloelastase; FULL-length MMP-12, hemopexin domain, catalytic domain, domain interaction., calcium, extracellular matrix; 3.00A {Homo sapiens} PDB: 2jxy_A
Probab=30.41 E-value=5.6e+02 Score=27.84 Aligned_cols=160 Identities=9% Similarity=0.026 Sum_probs=80.1
Q ss_pred eEEEEeCCEEEEEeccCCCCCccccEEEEEcCCCCCcEEEEEec-CCCCCCCcccEEEEeCCcEEEEEcCCCCCCCCCcE
Q 002047 178 HVATAVGTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQ-GPGPGPRYGHVMALVGQRYLMAIGGNDGKRPLADV 256 (975)
Q Consensus 178 hsa~~~~~~iyv~GG~~~~~~~~~dv~~yD~~t~~~~W~~v~~~-g~~P~~R~~h~~~~~~~~~lyV~GG~~g~~~~ndv 256 (975)
-+++.+++++|+|=|. -+|+++.......=..+... ..+|. ....+.....++++|+|-| +.+
T Consensus 184 DAv~~~~g~~~fFkg~--------~~Wr~~~~~~~~~p~~I~~~wpgLP~-~iDAa~~~~~~g~~~fFkg-------~~y 247 (365)
T 3ba0_A 184 DAVTTVGNKIFFFKDR--------FFWLKVSERPKTSVNLISSLWPTLPS-GIEAAYEIEARNQVFLFKD-------DKY 247 (365)
T ss_dssp SCEEEETTEEEEEETT--------EEEECCSSCCCCCEEEHHHHCSSCCS-SCCEEEEEGGGTEEEEEET-------TEE
T ss_pred eeEEEcCCeEEEEeCC--------EEEEEcCCCccCCccchhhhccCCCC-CccEEEEecCCCEEEEEeC-------CEE
Confidence 3455678899999663 46666544321111111100 12342 2222222222348999976 457
Q ss_pred EEEECCCCCcEE-EEccCCCCCCCCcceeEEEEEe-CCeEEEecCCCCCCCCccceEEeecCCCCeEEEEECCCC-----
Q 002047 257 WALDTAAKPYEW-RKLEPEGEGPPPCMYATASARS-DGLLLLCGGRDASSVPLASAYGLAKHRDGRWEWAIAPGV----- 329 (975)
Q Consensus 257 ~~yDl~s~~~~W-~~v~~~~~~P~~r~~~~a~~~~-~g~lyvfGG~~~~~~~l~d~~~~~~~~~~~W~w~~~~g~----- 329 (975)
|+|+.......+ ..+...+-+..+..-.+|.... ++++|+|-| +..|.|+.... + ..++.
T Consensus 248 Wr~~~~~~~~gyPk~I~~~GlP~~~~~IDAA~~~~~~~~~yfFkG--------~~yw~yd~~~~---~--v~~gyPk~I~ 314 (365)
T 3ba0_A 248 WLISNLRPEPNYPKSIHSFGFPNFVKKIDAAVFNPRFYRTYFFVD--------NQYWRYDERRQ---M--MDPGYPKLIT 314 (365)
T ss_dssp EECSTTSCTTTCSEETTTTTCCTTCCCCCEEEEETTTTEEEEEET--------TEEEEEETTTT---E--ECSSCCCCHH
T ss_pred EEEcCCcccCCCCceeeeccCCCCCCCcCEEEEeCCCCEEEEEEC--------CEEEEEeCCcc---e--ecCCCCcchh
Confidence 888654321122 2333332221122344554443 589999966 34677765433 1 11111
Q ss_pred ---CCCCcceeeEEEe-CCEEEEEcCcCCCCCccccCCcEEEEECCCCeEEE
Q 002047 330 ---SPSPRYQHAAVFV-NARLHVSGGALGGGRMVEDSSSVAVLDTAAGVWCD 377 (975)
Q Consensus 330 ---~P~~R~~hs~v~~-~~~L~V~GG~~~~~~~~~~~~dv~~yD~~t~~W~~ 377 (975)
+..+..-.++... ++++|.|=| +..|+||..+.+-..
T Consensus 315 ~~f~g~p~~iDaA~~~~~g~~YfFkg-----------~~ywr~d~~~~~v~~ 355 (365)
T 3ba0_A 315 KNFQGIGPKIDAVFYSKNKYYYFFQG-----------SNQFEYDFLLQRITK 355 (365)
T ss_dssp HHSTTCCSSCSEEEEETTTEEEEEET-----------TEEEEEETTTTEEEE
T ss_pred hcCCCCCCccceeeEecCCcEEEEeC-----------CEEEEEECCccEEec
Confidence 1112223344444 788998855 348999998887655
No 296
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=29.75 E-value=6.6e+02 Score=29.14 Aligned_cols=109 Identities=6% Similarity=-0.134 Sum_probs=49.4
Q ss_pred cEEEEECCCCcEEEecCCCCCCCCccceEEEEe-CCEEEEEeccCCC---CCccccEEEEEcCCCCCcEEEEEecCCCCC
Q 002047 151 DVHCYDVLTNKWSRITPFGEPPTPRAAHVATAV-GTMVVIQGGIGPA---GLSAEDLHVLDLTQQRPRWHRVVVQGPGPG 226 (975)
Q Consensus 151 dv~~yD~~t~~W~~l~~~g~~P~pR~~hsa~~~-~~~iyv~GG~~~~---~~~~~dv~~yD~~t~~~~W~~v~~~g~~P~ 226 (975)
.++.+|+.+++-..+........-+. .+.+.- +++.++++..... .....+++++|+.+.. -..+.... ...
T Consensus 38 ~i~~~d~~~g~~~~~~~~~~~~~~~v-~~~~~SpDg~~l~~~~~~~~~~~~~~~~~i~~~d~~~~~--~~~l~~~~-~~~ 113 (723)
T 1xfd_A 38 TVRLWNVETNTSTVLIEGKKIESLRA-IRYEISPDREYALFSYNVEPIYQHSYTGYYVLSKIPHGD--PQSLDPPE-VSN 113 (723)
T ss_dssp CEEEBCGGGCCCEEEECTTTTTTTTC-SEEEECTTSSEEEEEESCCCCSSSCCCSEEEEEESSSCC--CEECCCTT-CCS
T ss_pred CEEEEECCCCcEEEEecccccccccc-ceEEECCCCCEEEEEecCccceeecceeeEEEEECCCCc--eEeccCCc-ccc
Confidence 67788887776554433211000011 222222 4454455432211 1234789999998864 33443111 000
Q ss_pred CCcccEEEEeCCcEEEEEcCCCCCCCCCcEEEEECCCCCcEEEEcc
Q 002047 227 PRYGHVMALVGQRYLMAIGGNDGKRPLADVWALDTAAKPYEWRKLE 272 (975)
Q Consensus 227 ~R~~h~~~~~~~~~lyV~GG~~g~~~~ndv~~yDl~s~~~~W~~v~ 272 (975)
.+..+.+..-++ +.++++.. .+++++|+.+. +..++.
T Consensus 114 ~~~~~~~~SPdG-~~la~~~~------~~i~~~~~~~g--~~~~~~ 150 (723)
T 1xfd_A 114 AKLQYAGWGPKG-QQLIFIFE------NNIYYCAHVGK--QAIRVV 150 (723)
T ss_dssp CCCSBCCBCSST-TCEEEEET------TEEEEESSSSS--CCEEEE
T ss_pred ccccccEECCCC-CEEEEEEC------CeEEEEECCCC--ceEEEe
Confidence 111111111133 33344332 37899998877 555543
No 297
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=27.82 E-value=6.4e+02 Score=27.66 Aligned_cols=105 Identities=13% Similarity=0.096 Sum_probs=58.1
Q ss_pred cCcEEEEECCCCcEEEecCCCCCCCCccceEEEEe--CCEEEEEeccCC---CCCccccEEEEEcCCCCCcEEEEEecC-
Q 002047 149 TADVHCYDVLTNKWSRITPFGEPPTPRAAHVATAV--GTMVVIQGGIGP---AGLSAEDLHVLDLTQQRPRWHRVVVQG- 222 (975)
Q Consensus 149 ~~dv~~yD~~t~~W~~l~~~g~~P~pR~~hsa~~~--~~~iyv~GG~~~---~~~~~~dv~~yD~~t~~~~W~~v~~~g- 222 (975)
.+.++.+|..+++-...-+.|.. .| +++. +..+|+...... .+...+.+.+||+.+.. .-..++..+
T Consensus 58 ~~~V~ViD~~t~~v~~~I~vG~~-----P~-va~spDG~~lyVan~~~~r~~~G~~~~~VsviD~~t~~-v~~~I~v~~g 130 (386)
T 3sjl_D 58 VTQQFVIDGEAGRVIGMIDGGFL-----PN-PVVADDGSFIAHASTVFSRIARGERTDYVEVFDPVTLL-PTADIELPDA 130 (386)
T ss_dssp SEEEEEEETTTTEEEEEEEECSS-----CE-EEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTCC-EEEEEEETTC
T ss_pred CCEEEEEECCCCeEEEEEECCCC-----Cc-EEECCCCCEEEEEcccccccccCCCCCEEEEEECCCCe-EEEEEECCCc
Confidence 46899999998875544333322 24 4443 347888753211 11124679999999874 223333211
Q ss_pred C-CCCCCcccEEEEe-CCcEEEEEcCCCCCCCCCcEEEEECCCC
Q 002047 223 P-GPGPRYGHVMALV-GQRYLMAIGGNDGKRPLADVWALDTAAK 264 (975)
Q Consensus 223 ~-~P~~R~~h~~~~~-~~~~lyV~GG~~g~~~~ndv~~yDl~s~ 264 (975)
. ......-+.+.+- +++++||.... ..+.|.++|+.+.
T Consensus 131 ~r~~~g~~P~~~a~spDGk~lyVan~~----~~~~VsVID~~t~ 170 (386)
T 3sjl_D 131 PRFLVGTYPWMTSLTPDGKTLLFYQFS----PAPAVGVVDLEGK 170 (386)
T ss_dssp CCCCBSCCGGGEEECTTSSEEEEEECS----SSCEEEEEETTTT
T ss_pred cccccCCCCceEEEcCCCCEEEEEEcC----CCCeEEEEECCCC
Confidence 0 0111233344343 55688886421 1368999999988
No 298
>3mvd_K Regulator of chromosome condensation; protein-DNA complex, nucleosome core particle (NCP), NCP-CHR factor complex; HET: DNA; 2.90A {Drosophila melanogaster}
Probab=26.51 E-value=6.5e+02 Score=27.36 Aligned_cols=19 Identities=16% Similarity=-0.032 Sum_probs=15.3
Q ss_pred ceeEEEEEeCCeEEEecCC
Q 002047 282 MYATASARSDGLLLLCGGR 300 (975)
Q Consensus 282 ~~~~a~~~~~g~lyvfGG~ 300 (975)
..|+++...++.+|.+|-.
T Consensus 303 ~~ht~alt~~G~v~~wG~n 321 (423)
T 3mvd_K 303 QHHTVILTTDLKCSVVGRP 321 (423)
T ss_dssp SSEEEEEETTCCEEEEECC
T ss_pred cCeEEEEeCCCcEEEEECC
Confidence 5677778889999999863
No 299
>1hxn_A Hemopexin, HPX; heme, binding protein; 1.80A {Oryctolagus cuniculus} SCOP: b.66.1.1
Probab=26.24 E-value=3.9e+02 Score=26.92 Aligned_cols=60 Identities=18% Similarity=0.299 Sum_probs=30.1
Q ss_pred CcEEEEEcCCCCCCCCCcEEEEECCCCCcEEEEccCC-CCCCCCcceeEEEEEeCCeEEEecCCCCCCCCccceEEeec
Q 002047 238 QRYLMAIGGNDGKRPLADVWALDTAAKPYEWRKLEPE-GEGPPPCMYATASARSDGLLLLCGGRDASSVPLASAYGLAK 315 (975)
Q Consensus 238 ~~~lyV~GG~~g~~~~ndv~~yDl~s~~~~W~~v~~~-~~~P~~r~~~~a~~~~~g~lyvfGG~~~~~~~l~d~~~~~~ 315 (975)
++.+|+|=| +-.|+++.......=..+... +..| ....+|.. .++++|+|-| +..|.|+.
T Consensus 28 ~g~~yfFkg-------~~~Wr~~~~~~~~~p~~Is~~wpgLP--~~IDAA~~-~~~~~yfFkG--------~~yw~~~~ 88 (219)
T 1hxn_A 28 HGATYVFSG-------SHYWRLDTNRDGWHSWPIAHQWPQGP--STVDAAFS-WEDKLYLIQD--------TKVYVFLT 88 (219)
T ss_dssp TSCEEEEET-------TEEEESSSSSCTTCCEEGGGTCTTSC--SSCSEEEE-ETTEEEEEET--------TEEEEEEC
T ss_pred CCcEEEEeC-------CEEEEEcCCCCCCCceEhhhhccCCC--CCccEEEE-ECCcEEEecC--------CEEEEEeC
Confidence 447999876 346776654321000122211 1112 22333433 3899999966 34566654
No 300
>3hx6_A Type 4 fimbrial biogenesis protein PILY1; beta propeller, pilus protein, cell adhesion; 2.10A {Pseudomonas aeruginosa}
Probab=25.55 E-value=8.4e+02 Score=28.30 Aligned_cols=106 Identities=17% Similarity=0.197 Sum_probs=50.4
Q ss_pred cEEEEECCC-----CcEEEecC-CCCCCCCccceEEEEeC--CEEEEEe-ccCCCCCccccEEEEEcCCCCCcEEEEEec
Q 002047 151 DVHCYDVLT-----NKWSRITP-FGEPPTPRAAHVATAVG--TMVVIQG-GIGPAGLSAEDLHVLDLTQQRPRWHRVVVQ 221 (975)
Q Consensus 151 dv~~yD~~t-----~~W~~l~~-~g~~P~pR~~hsa~~~~--~~iyv~G-G~~~~~~~~~dv~~yD~~t~~~~W~~v~~~ 221 (975)
.+|.+|+.. ..|+.-.. ..++..--....++.+. ..+.||| |++.. .....+|++|+.+....|+.-. .
T Consensus 165 ~~yALDVT~P~~p~~LWe~~~~~~~~LG~t~s~P~I~~~~~g~w~~vfG~GY~~~-~~~~~Lyv~d~~tG~li~~i~~-~ 242 (570)
T 3hx6_A 165 GLFALDVTDPANIKLLWEIGVDQEPDLGYSFPKPTVARLHNGKWAVVTGNGYSSM-NDKAALLIIDMETGAITRKLEV-T 242 (570)
T ss_dssp EEEEEECSSGGGCEEEEEEETTTCTTCCBCCSCCEEEECTTSSEEEEEECCBSCT-TCCEEEEEEETTTCCEEEEEEE-C
T ss_pred EEEEEECCCCCCCceeEEECCCCccccCccccCCEEEEecCCCEEEEEccccCCC-CCccEEEEEECCCCceEEEEec-C
Confidence 467777654 35665421 11111222233344443 3555555 55432 2245799999998764554332 2
Q ss_pred CCCCCCCccc-EEEEeC-C-----cEEEEEcCCCCCCCCCcEEEEECCCCC
Q 002047 222 GPGPGPRYGH-VMALVG-Q-----RYLMAIGGNDGKRPLADVWALDTAAKP 265 (975)
Q Consensus 222 g~~P~~R~~h-~~~~~~-~-----~~lyV~GG~~g~~~~ndv~~yDl~s~~ 265 (975)
+... .-.+. ..+.++ + ..+|+ | .....+|+||+....
T Consensus 243 ~~~~-~~~Gls~~~~~D~d~Dg~~D~~Ya-G-----Dl~GnlWRfDl~~~~ 286 (570)
T 3hx6_A 243 GRTG-VPNGLSSPRLADNNSDGVADYAYA-G-----DLQGNLWRFDLIAGK 286 (570)
T ss_dssp CSTT-SCCCEEEEEEECTTSSSBCCEEEE-E-----ETTSEEEEEECSCSS
T ss_pred CCCc-cCCccccceEEecCCCCceeEEEE-E-----eCCCcEEEEEcCCCC
Confidence 2111 11122 222232 1 14554 2 123579999998753
No 301
>1su3_A Interstitial collagenase; prodomain, hemopexin domain, exocite, structural proteomics in europe, spine, structural genomics, hydrolase; HET: EPE; 2.20A {Homo sapiens} SCOP: a.20.1.2 b.66.1.1 d.92.1.11 PDB: 2clt_A 1fbl_A*
Probab=25.49 E-value=7.5e+02 Score=27.71 Aligned_cols=156 Identities=9% Similarity=0.009 Sum_probs=78.4
Q ss_pred EEEEeCCEEEEEeccCCCCCccccEEEEEcCCCCCcEEEEEecC---CCCCCCcccEEEEeC-CcEEEEEcCCCCCCCCC
Q 002047 179 VATAVGTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQG---PGPGPRYGHVMALVG-QRYLMAIGGNDGKRPLA 254 (975)
Q Consensus 179 sa~~~~~~iyv~GG~~~~~~~~~dv~~yD~~t~~~~W~~v~~~g---~~P~~R~~h~~~~~~-~~~lyV~GG~~g~~~~n 254 (975)
+++.+.+++|+|=|. -+|+++.... .+....+.. .+|.. .. ++.... ++++|+|=| +
T Consensus 267 Ai~~~~ge~y~Fkg~--------~~wr~~~~~~--~~~p~~I~~~Wp~LP~~-iD-Aa~~~~~~g~~~fFKg-------~ 327 (450)
T 1su3_A 267 AITTIRGEVMFFKDR--------FYMRTNPFYP--EVELNFISVFWPQLPNG-LE-AAYEFADRDEVRFFKG-------N 327 (450)
T ss_dssp EEEEETTEEEEEETT--------EEEECCTTSS--SCEEEEGGGTCTTSCSS-CC-EEEEEGGGTEEEEEET-------T
T ss_pred eEEecCCeEEEEeCC--------EEEEEcCCCC--cccceehhHhccCCCCC-ee-EEEEEcCCCeEEEEeC-------C
Confidence 566678899999773 4566655432 233322222 23321 22 222222 348999876 4
Q ss_pred cEEEEECCCCCcEE-EEcc-CCCCCCCCcceeEEEEEe-CCeEEEecCCCCCCCCccceEEeecCCCCeEEEEECCCC--
Q 002047 255 DVWALDTAAKPYEW-RKLE-PEGEGPPPCMYATASARS-DGLLLLCGGRDASSVPLASAYGLAKHRDGRWEWAIAPGV-- 329 (975)
Q Consensus 255 dv~~yDl~s~~~~W-~~v~-~~~~~P~~r~~~~a~~~~-~g~lyvfGG~~~~~~~l~d~~~~~~~~~~~W~w~~~~g~-- 329 (975)
.+|+|+..+....+ ..+. ..+-+..+....+|.... ++++|+|-| +..|.|+.... + ..++.
T Consensus 328 ~~W~~~~~~~~~gyP~~i~~~~g~P~~~~~IDAA~~~~~~~k~yfFkG--------~~yw~yd~~~~---~--~~~gYPk 394 (450)
T 1su3_A 328 KYWAVQGQNVLHGYPKDIYSSFGFPRTVKHIDAALSEENTGKTYFFVA--------NKYWRYDEYKR---S--MDPGYPK 394 (450)
T ss_dssp EEEEEETTEECTTCSEEHHHHHCCCTTCCCCCEEEEETTTTEEEEEET--------TEEEEEETTTT---E--ECSSCSE
T ss_pred EEEEecCCcccCCCceeeehhhcCCCCCCccceEEEEcCCCeEEEEeC--------CEEEEEeCCCc---c--ccCCCCc
Confidence 57888743210000 1111 111111122334444443 689999966 34677754422 1 11111
Q ss_pred ------CCCCcceeeEEEeCCEEEEEcCcCCCCCccccCCcEEEEECCCCeEEE
Q 002047 330 ------SPSPRYQHAAVFVNARLHVSGGALGGGRMVEDSSSVAVLDTAAGVWCD 377 (975)
Q Consensus 330 ------~P~~R~~hs~v~~~~~L~V~GG~~~~~~~~~~~~dv~~yD~~t~~W~~ 377 (975)
+-.+..-.+++..++++|+|=| +..|+||..+.+=..
T Consensus 395 ~I~~~fpgip~~iDAA~~~~g~~YFFkg-----------~~ywr~d~~~~~v~~ 437 (450)
T 1su3_A 395 MIAHDFPGIGHKVDAVFMKDGFFYFFHG-----------TRQYKFDPKTKRILT 437 (450)
T ss_dssp EHHHHSTTSCSCCSEEEEETTEEEEEET-----------TEEEEEETTTTEEEE
T ss_pred chhhcCCCCCCCccEEEEcCCeEEEEeC-----------CEEEEEECCcceEec
Confidence 0112223345556889999865 347999998886544
No 302
>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A
Probab=24.36 E-value=4.6e+02 Score=31.16 Aligned_cols=98 Identities=7% Similarity=0.049 Sum_probs=51.3
Q ss_pred CcEEEEECCCCcEEEecCCCCCCCCccceEEEEe-CCEEEEEeccCCCCCccccEEEEEcCCCCCcEEEEEecCCCCCCC
Q 002047 150 ADVHCYDVLTNKWSRITPFGEPPTPRAAHVATAV-GTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGPR 228 (975)
Q Consensus 150 ~dv~~yD~~t~~W~~l~~~g~~P~pR~~hsa~~~-~~~iyv~GG~~~~~~~~~dv~~yD~~t~~~~W~~v~~~g~~P~~R 228 (975)
+-+++||+.+.+++.+...+ .+....-.+++.. ++.|++. .. +-+++||+.+.. +.... ...+|..
T Consensus 493 ~Gl~~~d~~~~~~~~~~~~~-~~~~~~~~~i~~d~~g~lWig-t~-------~Gl~~~~~~~~~--~~~~~-~~gl~~~- 559 (758)
T 3ott_A 493 KGIDKINPRTREVTKLFADE-LTGEKSPNYLLCDEDGLLWVG-FH-------GGVMRINPKDES--QQSIS-FGSFSNN- 559 (758)
T ss_dssp SSEEEEETTTTEEEEECTTT-SCGGGCEEEEEECTTSCEEEE-ET-------TEEEEECC--CC--CCBCC-CCC---C-
T ss_pred CCcEEEeCCCCceEEecCCC-cCCCcccceEEECCCCCEEEE-ec-------CceEEEecCCCc--eEEec-ccCCCcc-
Confidence 46889999999998874321 1111112233332 3477754 32 238889987764 44332 1233432
Q ss_pred cccEEEEeCCcEEEEEcCCCCCCCCCcEEEEECCCCCcEEEE
Q 002047 229 YGHVMALVGQRYLMAIGGNDGKRPLADVWALDTAAKPYEWRK 270 (975)
Q Consensus 229 ~~h~~~~~~~~~lyV~GG~~g~~~~ndv~~yDl~s~~~~W~~ 270 (975)
.-++++.- ++.||+... +-+.+||+.+. +...
T Consensus 560 ~i~~i~~~-~g~lWi~t~-------~Gl~~~~~~~~--~~~~ 591 (758)
T 3ott_A 560 EILSMTCV-KNSIWVSTT-------NGLWIIDRKTM--DARQ 591 (758)
T ss_dssp CEEEEEEE-TTEEEEEES-------SCEEEEETTTC--CEEE
T ss_pred ceEEEEEC-CCCEEEECC-------CCeEEEcCCCc--eeEE
Confidence 22333333 447887552 34899999988 5544
No 303
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=24.32 E-value=1.5e+02 Score=32.82 Aligned_cols=69 Identities=10% Similarity=0.019 Sum_probs=40.3
Q ss_pred CCEEEEEec---cCCCCCccccEEEEEcCCCCCcEEEEEecCCCCCCCcccEEEEe-CCc-EEEEEcCCCCCCCCCcEEE
Q 002047 184 GTMVVIQGG---IGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGPRYGHVMALV-GQR-YLMAIGGNDGKRPLADVWA 258 (975)
Q Consensus 184 ~~~iyv~GG---~~~~~~~~~dv~~yD~~t~~~~W~~v~~~g~~P~~R~~h~~~~~-~~~-~lyV~GG~~g~~~~ndv~~ 258 (975)
++++|+.-+ .+......+.++++|+.+.. .-.+++ .+..-+++.+- +++ .||+.-+. .++|.+
T Consensus 291 ~~~lyV~~~~~~~~~hk~~~~~V~viD~~t~k-v~~~i~------vg~~~~~lavs~D~~~~ly~tn~~-----~~~VsV 358 (386)
T 3sjl_D 291 LDRIYLLVDQRDEWRHKTASRFVVVLDAKTGE-RLAKFE------MGHEIDSINVSQDEKPLLYALSTG-----DKTLYI 358 (386)
T ss_dssp TTEEEEEEEECCTTCTTSCEEEEEEEETTTCC-EEEEEE------EEEEECEEEECSSSSCEEEEEETT-----TTEEEE
T ss_pred CCeEEEEeccccccccCCCCCEEEEEECCCCe-EEEEEE------CCCCcceEEECCCCCeEEEEEcCC-----CCeEEE
Confidence 569999643 22223335789999999864 222332 22233344443 332 57775332 468999
Q ss_pred EECCCC
Q 002047 259 LDTAAK 264 (975)
Q Consensus 259 yDl~s~ 264 (975)
||..+.
T Consensus 359 iD~~t~ 364 (386)
T 3sjl_D 359 HDAESG 364 (386)
T ss_dssp EETTTC
T ss_pred EECCCC
Confidence 999988
No 304
>3a0f_A Xyloglucanase; beta-propeller, hydrolase; 2.50A {Geotrichum SP}
Probab=23.44 E-value=1e+03 Score=28.47 Aligned_cols=211 Identities=12% Similarity=0.060 Sum_probs=96.8
Q ss_pred cEEEEECCCCcEEEecCCC---CCC----CCccceEEEEe---CCEEEEEeccCCCCCccccEEEEEcCCCCCcEEEEEe
Q 002047 151 DVHCYDVLTNKWSRITPFG---EPP----TPRAAHVATAV---GTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVV 220 (975)
Q Consensus 151 dv~~yD~~t~~W~~l~~~g---~~P----~pR~~hsa~~~---~~~iyv~GG~~~~~~~~~dv~~yD~~t~~~~W~~v~~ 220 (975)
-+|+-+-.-.+|+.+...- ..+ .....+++++. .+.+|+..|...... ....+|-....-..|+++..
T Consensus 44 gv~~S~DgG~tW~~~~~~~~~~~~~~~~~~~~~~~~ia~dp~~~~~~~~~~g~~~~~~--~~~~i~~S~DgG~TW~~~~~ 121 (763)
T 3a0f_A 44 GTYRWNAAKWEWEPITDFIINNALAGNGANLLGTESIALDPHNPDRLYLAQGDYVQWD--PWAAFLVSDDRGKTFKQYRS 121 (763)
T ss_dssp CEEEEETTTTEEEESCTTCBTTCSSSCCCCCCSEEEEECCTTCTTCEEEEECSCTTTC--SCCEEEEESSTTSSCEEEEC
T ss_pred cEEEECCCCCCeeECccCccccccCCCcccccceeEEEECCCCCCEEEEEecccccCC--CCceEEEECCCCCCceeccC
Confidence 4566666677899986520 001 11223333333 247888665311111 12233333322225999862
Q ss_pred cCCCC---CCCc-ccEEEEe--CCcEEEEEcCCCCCCCCCcEEEEECCCCCcEEEEccCCCCCCCCcceeEEEEEe---C
Q 002047 221 QGPGP---GPRY-GHVMALV--GQRYLMAIGGNDGKRPLADVWALDTAAKPYEWRKLEPEGEGPPPCMYATASARS---D 291 (975)
Q Consensus 221 ~g~~P---~~R~-~h~~~~~--~~~~lyV~GG~~g~~~~ndv~~yDl~s~~~~W~~v~~~~~~P~~r~~~~a~~~~---~ 291 (975)
.-..+ ..|. .+.+++. +.+.+|+.+. ...+|+=+-.-. +|+++...........+...+++. .
T Consensus 122 ~~~~~~~~~g~~~~~~l~v~p~~~~~v~a~~~------~~~l~~S~DgG~--TW~~~~~~~~~~~~~~~~~~i~~~p~~~ 193 (763)
T 3a0f_A 122 PVPMGANDMGRNGGERLAVNPHWTDELWFGSR------TQGLWRSTDRAQ--TWSRMNQLPDSSTYGIGIISVIFDPKNV 193 (763)
T ss_dssp SSCCCTTSTTTTSBCCEEECTTSTTCEEEECS------SSCEEEESSTTS--SCEECTTSCCCSCTTTCEEEEEECSSST
T ss_pred CcccCccccCccccceEEECCCCCCEEEEEeC------CCcEEEECCCCc--CccccccCcccCCCccceEEEEECCCCC
Confidence 11111 1232 2344443 2346777542 134554433344 899987543211111222233332 3
Q ss_pred CeEEEecCCCCCCCCccceEEeecCCCCeEEEEECCCCCC-------------------CCcceeeEEEe-CCEEEEEcC
Q 002047 292 GLLLLCGGRDASSVPLASAYGLAKHRDGRWEWAIAPGVSP-------------------SPRYQHAAVFV-NARLHVSGG 351 (975)
Q Consensus 292 g~lyvfGG~~~~~~~l~d~~~~~~~~~~~W~w~~~~g~~P-------------------~~R~~hs~v~~-~~~L~V~GG 351 (975)
+.+|+.....+ .++.-.+.-. + |..+.+.+. .++..+.+++. ++.||+...
T Consensus 194 ~~~~~~~~~~g------~v~~S~DgG~-t--W~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~g~l~~~~~ 264 (763)
T 3a0f_A 194 GTAYVASHAVG------GLWVTWDGGA-N--WSQVGGQPTQWSDWTKSIVAASGTAIQSSGPLPIKIALGKNGRLYITYS 264 (763)
T ss_dssp TCEEEEESSTT------CEEEESSSSS-S--CEECTTCCCSCCHHHHHHHHHHCCCCSSSSCEEEEEEECTTSCEEEEEE
T ss_pred CEEEEEEeCCC------eEEEECCCCC-C--ccccCCCccccccccccccccccccccCCCCcceeEEECCCCcEEEEec
Confidence 46777543211 2343333322 4 445543210 23344444443 577887742
Q ss_pred cCCCCCccccCCcEEEEECCCCeEEEcccC
Q 002047 352 ALGGGRMVEDSSSVAVLDTAAGVWCDTKSV 381 (975)
Q Consensus 352 ~~~~~~~~~~~~dv~~yD~~t~~W~~v~~~ 381 (975)
...... ......+++.+-...+|+.+...
T Consensus 265 ~~~~~~-~~~~g~v~rS~D~G~tW~~~~~~ 293 (763)
T 3a0f_A 265 DAPGPW-GVLYGEVWSYDPTNGNWKHITPS 293 (763)
T ss_dssp SSCSSS-CCCCEEEEEEETTTTEEEECCTT
T ss_pred cCCCCC-CCcceeEEEEeCCCCceEECCCC
Confidence 111000 01145699999999999998754
No 305
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=23.33 E-value=8e+02 Score=27.25 Aligned_cols=122 Identities=10% Similarity=0.075 Sum_probs=55.2
Q ss_pred CcEEEEECCCCcEEEecCCCCCCCCccceEEEEe-CCEEEEEeccCCCCCccccEEEEEcCCCCCcEEEEEecCCCCCCC
Q 002047 150 ADVHCYDVLTNKWSRITPFGEPPTPRAAHVATAV-GTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGPR 228 (975)
Q Consensus 150 ~dv~~yD~~t~~W~~l~~~g~~P~pR~~hsa~~~-~~~iyv~GG~~~~~~~~~dv~~yD~~t~~~~W~~v~~~g~~P~~R 228 (975)
..+..+|........+... . ..-.+++.. ++..++.|+. ...+.++|..... -..+. + . ..
T Consensus 284 ~~i~~w~~~~~~~~~~~~h----~-~~v~~~~~~~~~~~l~t~~~------d~~i~~w~~~~~~--~~~~~--~--~-~~ 345 (577)
T 2ymu_A 284 KTVKLWNRNGQLLQTLTGH----S-SSVWGVAFSPDGQTIASASD------DKTVKLWNRNGQH--LQTLT--G--H-SS 345 (577)
T ss_dssp SCEEEEETTSCEEEEECCC----S-SCEEEEEECTTSSEEEEEET------TSCEEEEETTSCE--EEEEC--C--C-SS
T ss_pred CEEEEEeCCCcEEEEEecC----C-CCeEEEEECCCCCEEEEEeC------CCeEEEEeCCCCe--eEEEe--C--C-CC
Confidence 3566777665544444321 1 111122222 3455555553 2457788876542 22221 1 1 11
Q ss_pred cccEEEEeCCcEEEEEcCCCCCCCCCcEEEEECCCCCcEEEEccCCCCCCCCcceeEEEEEeCCeEEEecCCC
Q 002047 229 YGHVMALVGQRYLMAIGGNDGKRPLADVWALDTAAKPYEWRKLEPEGEGPPPCMYATASARSDGLLLLCGGRD 301 (975)
Q Consensus 229 ~~h~~~~~~~~~lyV~GG~~g~~~~ndv~~yDl~s~~~~W~~v~~~~~~P~~r~~~~a~~~~~g~lyvfGG~~ 301 (975)
.-.+++...++..++.|+.++ .+..||.... .-..+..... .....+...+++.++.|+.+
T Consensus 346 ~v~~~~~s~~g~~l~~~~~dg-----~v~~~~~~~~--~~~~~~~~~~-----~v~~~~~s~dg~~l~~~~~d 406 (577)
T 2ymu_A 346 SVWGVAFSPDGQTIASASDDK-----TVKLWNRNGQ--LLQTLTGHSS-----SVRGVAFSPDGQTIASASDD 406 (577)
T ss_dssp CEEEEEECTTSSEEEEEETTS-----EEEEEETTCC--EEEEEECCSS-----CEEEEEECTTSSCEEEEETT
T ss_pred CEEEEEECCCCCEEEEEeCCC-----EEEEEcCCCC--EEEEecCCCC-----CeEEEEECCCCCEEEEEeCC
Confidence 112233333445667776554 4677786554 3333322211 11122233466667777654
No 306
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=23.25 E-value=6.9e+02 Score=26.49 Aligned_cols=95 Identities=14% Similarity=0.140 Sum_probs=49.1
Q ss_pred CCEEEEEeccCCCCCccccEEEEEcCCCCCcEEEEEecCCCCCCCcccEEEEeCCcEEEEEcCCCCCCCCCcEEEEECCC
Q 002047 184 GTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGPRYGHVMALVGQRYLMAIGGNDGKRPLADVWALDTAA 263 (975)
Q Consensus 184 ~~~iyv~GG~~~~~~~~~dv~~yD~~t~~~~W~~v~~~g~~P~~R~~h~~~~~~~~~lyV~GG~~g~~~~ndv~~yDl~s 263 (975)
+++.++.|+. ...+.+||+.+.. -.... .+ ....-.+++...++..++.|+.++ .+..||+.+
T Consensus 134 dg~~l~s~~~------d~~i~iwd~~~~~--~~~~~-~~---h~~~v~~~~~~p~~~~l~s~s~d~-----~v~iwd~~~ 196 (393)
T 1erj_A 134 DGKFLATGAE------DRLIRIWDIENRK--IVMIL-QG---HEQDIYSLDYFPSGDKLVSGSGDR-----TVRIWDLRT 196 (393)
T ss_dssp TSSEEEEEET------TSCEEEEETTTTE--EEEEE-CC---CSSCEEEEEECTTSSEEEEEETTS-----EEEEEETTT
T ss_pred CCCEEEEEcC------CCeEEEEECCCCc--EEEEE-cc---CCCCEEEEEEcCCCCEEEEecCCC-----cEEEEECCC
Confidence 4466777764 3578999998752 22211 11 111122333333335666676654 688899988
Q ss_pred CCcEEEEccCCCCCCCCcceeEEEEEe-CCeEEEecCCCC
Q 002047 264 KPYEWRKLEPEGEGPPPCMYATASARS-DGLLLLCGGRDA 302 (975)
Q Consensus 264 ~~~~W~~v~~~~~~P~~r~~~~a~~~~-~g~lyvfGG~~~ 302 (975)
. +....-.... .....+... ++++++.|+.++
T Consensus 197 ~--~~~~~~~~~~-----~v~~~~~~~~~~~~l~~~s~d~ 229 (393)
T 1erj_A 197 G--QCSLTLSIED-----GVTTVAVSPGDGKYIAAGSLDR 229 (393)
T ss_dssp T--EEEEEEECSS-----CEEEEEECSTTCCEEEEEETTS
T ss_pred C--eeEEEEEcCC-----CcEEEEEECCCCCEEEEEcCCC
Confidence 7 4433221111 111222222 678888887654
No 307
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=22.89 E-value=7.1e+02 Score=26.51 Aligned_cols=96 Identities=13% Similarity=0.030 Sum_probs=47.4
Q ss_pred CcEEEEECCCCcEEEecCCCCCCCCccceEEEEe-CCEEEEEeccCCCCCccccEEEEEcCCCCCcEEEEEecCCCCCCC
Q 002047 150 ADVHCYDVLTNKWSRITPFGEPPTPRAAHVATAV-GTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGPR 228 (975)
Q Consensus 150 ~dv~~yD~~t~~W~~l~~~g~~P~pR~~hsa~~~-~~~iyv~GG~~~~~~~~~dv~~yD~~t~~~~W~~v~~~g~~P~~R 228 (975)
..+..||+.+.+-...-.. .+....-.+++.. ++.+++.|+. ...+.+||+.+.. ....- ..+..
T Consensus 192 ~~i~iwd~~~~~~~~~~~~--~~h~~~v~~~~~s~~~~~l~s~~~------dg~i~iwd~~~~~--~~~~~---~~~~~- 257 (437)
T 3gre_A 192 SRVIIFDIRTLERLQIIEN--SPRHGAVSSICIDEECCVLILGTT------RGIIDIWDIRFNV--LIRSW---SFGDH- 257 (437)
T ss_dssp SEEEEEETTTCCEEEEEEC--CGGGCCEEEEEECTTSCEEEEEET------TSCEEEEETTTTE--EEEEE---BCTTC-
T ss_pred CeEEEEeCCCCeeeEEEcc--CCCCCceEEEEECCCCCEEEEEcC------CCeEEEEEcCCcc--EEEEE---ecCCC-
Confidence 4788899987654332211 0011111222222 4566777765 3569999998752 22211 11111
Q ss_pred cccEEE-Ee----CCcEEEEEcCCCCCCCCCcEEEEECCCC
Q 002047 229 YGHVMA-LV----GQRYLMAIGGNDGKRPLADVWALDTAAK 264 (975)
Q Consensus 229 ~~h~~~-~~----~~~~lyV~GG~~g~~~~ndv~~yDl~s~ 264 (975)
..-..+ .. .++.+++.|+.++ .+..||+.+.
T Consensus 258 ~~v~~~~~~~~~s~~~~~l~s~~~dg-----~i~iwd~~~~ 293 (437)
T 3gre_A 258 APITHVEVCQFYGKNSVIVVGGSSKT-----FLTIWNFVKG 293 (437)
T ss_dssp EEEEEEEECTTTCTTEEEEEEESTTE-----EEEEEETTTT
T ss_pred CceEEEEeccccCCCccEEEEEcCCC-----cEEEEEcCCC
Confidence 111111 11 2335666666554 6888999876
No 308
>1qhu_A Protein (hemopexin); beta propeller, HAEM binding and transport, iron metabolism, binding protein; HET: HEM; 2.30A {Oryctolagus cuniculus} SCOP: b.66.1.1 b.66.1.1 PDB: 1qjs_A*
Probab=22.77 E-value=8.5e+02 Score=27.38 Aligned_cols=59 Identities=8% Similarity=-0.035 Sum_probs=36.7
Q ss_pred CCEEEEEeccCCCCCccccEEEEEcCCCCCcEEEEEecCCCCCCCcccEEEEeCCcEEEEEcCCCCCCCCCcEEEEECCC
Q 002047 184 GTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGPRYGHVMALVGQRYLMAIGGNDGKRPLADVWALDTAA 263 (975)
Q Consensus 184 ~~~iyv~GG~~~~~~~~~dv~~yD~~t~~~~W~~v~~~g~~P~~R~~h~~~~~~~~~lyV~GG~~g~~~~ndv~~yDl~s 263 (975)
++++|+|-| +..|+||..+.+ ... ..-..+| .. -++....+ ++|+|-| +..|+||..+
T Consensus 158 ~~~~yfFkG--------~~yw~yd~~~~~--~~~-~~w~gi~--~i-DAA~~~~g-~~YfFkG-------~~y~rfd~~~ 215 (460)
T 1qhu_A 158 DEGILFFQG--------NRKWFWDLTTGT--KKE-RSWPAVG--NC-TSALRWLG-RYYCFQG-------NQFLRFNPVS 215 (460)
T ss_dssp SSEEEEEET--------TEEEEEETTTTE--EEE-ECCTTSC--CC-SEEEEETT-EEEEEET-------TEEEEECTTT
T ss_pred CCeEEEEec--------ccEEEEecccce--eec-ccCCCCC--cc-chheeeCC-ceEEEEC-------CEEEEEcCcc
Confidence 568899987 368999987753 221 1111223 22 34444555 8999987 4678888765
Q ss_pred C
Q 002047 264 K 264 (975)
Q Consensus 264 ~ 264 (975)
.
T Consensus 216 ~ 216 (460)
T 1qhu_A 216 G 216 (460)
T ss_dssp C
T ss_pred C
Confidence 4
No 309
>3mvd_K Regulator of chromosome condensation; protein-DNA complex, nucleosome core particle (NCP), NCP-CHR factor complex; HET: DNA; 2.90A {Drosophila melanogaster}
Probab=22.63 E-value=7.6e+02 Score=26.79 Aligned_cols=63 Identities=16% Similarity=0.205 Sum_probs=33.7
Q ss_pred ceEEEEeC-CEEEEEec-cCCCCC-----ccccEEEEEcCCCCCcEEEEEecCCCCCCCcccEEEEeCCcEEEEEcCC
Q 002047 177 AHVATAVG-TMVVIQGG-IGPAGL-----SAEDLHVLDLTQQRPRWHRVVVQGPGPGPRYGHVMALVGQRYLMAIGGN 247 (975)
Q Consensus 177 ~hsa~~~~-~~iyv~GG-~~~~~~-----~~~dv~~yD~~t~~~~W~~v~~~g~~P~~R~~h~~~~~~~~~lyV~GG~ 247 (975)
.|++++.. +.||.+|- .+..+. ..+...-..+... .++..+. .-..|++++..++.+|.+|-.
T Consensus 137 ~hs~al~~~G~v~~wG~~~n~~GqlG~~~~~~~~~p~~~~~~-~~i~~va-------~G~~hs~alt~~G~v~~wG~n 206 (423)
T 3mvd_K 137 SHSACLLEDGRVFAWGSFRDSHGNMGLTIDGNKRTPIDLMEG-TVCCSIA-------SGADHLVILTTAGKVFTVGCA 206 (423)
T ss_dssp SEEEEEETTSCEEEEECEECSSSEEESBTTBCEEEEEESSTT-CCEEEEE-------ECSSEEEEEETTSCEEEEECC
T ss_pred CeEEEEeCCCeEEEEeCCCCCCCCcCcCCCCCCceeeEecCC-CcEEEEe-------cCCCeEEEEecCCeEEEeeCC
Confidence 67777774 59999994 111111 0111111111111 1244443 224688888877799999944
No 310
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=21.77 E-value=7.4e+02 Score=26.34 Aligned_cols=65 Identities=8% Similarity=0.095 Sum_probs=37.2
Q ss_pred CEEEEEeccCCCCCccccEEEEEcCCCCCcEEEEEecCCCCCCCcccEEEEeCCcEEEEEcCCCCCCCCCcEEEEECCCC
Q 002047 185 TMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGPRYGHVMALVGQRYLMAIGGNDGKRPLADVWALDTAAK 264 (975)
Q Consensus 185 ~~iyv~GG~~~~~~~~~dv~~yD~~t~~~~W~~v~~~g~~P~~R~~h~~~~~~~~~lyV~GG~~g~~~~ndv~~yDl~s~ 264 (975)
+.+++.|+. ...+.+||+.+... -..+. + .+....-.+++...++.+++.|+.++ .+..||+.+.
T Consensus 182 ~~~l~~~~~------d~~i~iwd~~~~~~-~~~~~--~-~~h~~~v~~~~~s~~~~~l~s~~~dg-----~i~iwd~~~~ 246 (437)
T 3gre_A 182 KSLLVALTN------LSRVIIFDIRTLER-LQIIE--N-SPRHGAVSSICIDEECCVLILGTTRG-----IIDIWDIRFN 246 (437)
T ss_dssp CEEEEEEET------TSEEEEEETTTCCE-EEEEE--C-CGGGCCEEEEEECTTSCEEEEEETTS-----CEEEEETTTT
T ss_pred CCEEEEEeC------CCeEEEEeCCCCee-eEEEc--c-CCCCCceEEEEECCCCCEEEEEcCCC-----eEEEEEcCCc
Confidence 567777764 35799999987641 22222 1 01111222233333446777777664 5889999877
No 311
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=21.57 E-value=1e+03 Score=27.89 Aligned_cols=20 Identities=20% Similarity=0.139 Sum_probs=15.2
Q ss_pred ccCcEEEEECCCCcEEEecC
Q 002047 148 ATADVHCYDVLTNKWSRITP 167 (975)
Q Consensus 148 ~~~dv~~yD~~t~~W~~l~~ 167 (975)
...++|.||+.+++...+..
T Consensus 90 ~~~~~~~~d~~~~~~~~l~~ 109 (740)
T 4a5s_A 90 YTASYDIYDLNKRQLITEER 109 (740)
T ss_dssp EEEEEEEEETTTTEECCSSC
T ss_pred cceEEEEEECCCCcEEEccc
Confidence 34688999999998766543
No 312
>1gen_A Gelatinase A; hydrolase, hemopexin domain, metalloprotease, hydrolase (metalloprotease); 2.15A {Homo sapiens} SCOP: b.66.1.1 PDB: 1rtg_A
Probab=21.30 E-value=6.2e+02 Score=25.24 Aligned_cols=157 Identities=11% Similarity=0.099 Sum_probs=78.3
Q ss_pred ceEEEEeCCEEEEEeccCCCCCccccEEEEEcCCCCCcEEEEEecC---CCCCCCcccEEEEeCCcEEEEEcCCCCCCCC
Q 002047 177 AHVATAVGTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQG---PGPGPRYGHVMALVGQRYLMAIGGNDGKRPL 253 (975)
Q Consensus 177 ~hsa~~~~~~iyv~GG~~~~~~~~~dv~~yD~~t~~~~W~~v~~~g---~~P~~R~~h~~~~~~~~~lyV~GG~~g~~~~ 253 (975)
.-+++.+.+++|+|=|. .+|+++..... ......+.. .+|. .-..+.....++++|+|=|
T Consensus 33 ~DAi~~~~g~~~fFkg~--------~~Wr~~~~~~~-~~~P~~I~~~wp~lp~-~IDAA~~~~~~~k~yfFkG------- 95 (218)
T 1gen_A 33 FDGIAQIRGEIFFFKDR--------FIWRTVTPRDK-PMGPLLVATFWPELPE-KIDAVYEAPQEEKAVFFAG------- 95 (218)
T ss_dssp CSEEEEETTEEEEEETT--------EEEEESSTTSC-CEEEEEGGGTCTTSCS-CCSEEEEETTTTEEEEEET-------
T ss_pred EeEEEeCCCcEEEEECC--------EEEEEeCCCCc-cCCCEEHHHhcCCCCC-CccEEEEECCCCEEEEEeC-------
Confidence 34556678899999773 56776654321 122111111 2332 2232222223458999976
Q ss_pred CcEEEEECCCCCcEE-EEccCCCCCCCCcceeEEEEE-eCCeEEEecCCCCCCCCccceEEeecCCCCeEEEEECCCC--
Q 002047 254 ADVWALDTAAKPYEW-RKLEPEGEGPPPCMYATASAR-SDGLLLLCGGRDASSVPLASAYGLAKHRDGRWEWAIAPGV-- 329 (975)
Q Consensus 254 ndv~~yDl~s~~~~W-~~v~~~~~~P~~r~~~~a~~~-~~g~lyvfGG~~~~~~~l~d~~~~~~~~~~~W~w~~~~g~-- 329 (975)
+..|+||-.+..-.+ +.+...+.+.......+|... .++++|+|-| +..|.|+.... +- ..+.
T Consensus 96 ~~yW~y~~~~~~~gyPk~I~~~g~p~~~~~IDAAf~~~~~g~~YfFkG--------~~ywr~d~~~~---~v--~~gyPr 162 (218)
T 1gen_A 96 NEYWIYSASTLERGYPKPLTSLGLPPDVQRVDAAFNWSKNKKTYIFAG--------DKFWRYNEVKK---KM--DPGFPK 162 (218)
T ss_dssp TEEEEEETTEECTTCSEEGGGGTCCTTCCCCSEEEEETTTTEEEEEET--------TEEEEEETTTT---EE--CSSCCE
T ss_pred CEEEEEcCccccCCCCccHhhcCCCCCcCCccEEEEEcCCCeEEEEEC--------CEEEEEECccc---cc--cCCCCc
Confidence 568999853210000 123222222222234444443 5789999976 34566665433 10 1110
Q ss_pred ------CCCCcceeeEEEeC--CEEEEEcCcCCCCCccccCCcEEEEECCCCe
Q 002047 330 ------SPSPRYQHAAVFVN--ARLHVSGGALGGGRMVEDSSSVAVLDTAAGV 374 (975)
Q Consensus 330 ------~P~~R~~hs~v~~~--~~L~V~GG~~~~~~~~~~~~dv~~yD~~t~~ 374 (975)
+..+..-.++.... +.+|+|=| +..|.||..+..
T Consensus 163 ~i~~~w~g~p~~idaAf~~~~~g~~YfFkg-----------~~y~~~~~~~~~ 204 (218)
T 1gen_A 163 LIADAWNAIPDNLDAVVDLQGGGHSYFFKG-----------AYYLKLENQSLK 204 (218)
T ss_dssp EHHHHSSSCCSSCSEEEECTTTCEEEEEET-----------TEEEEEETTEEE
T ss_pred chhhccCCCCCCCCEEEEEcCCCcEEEEEC-----------CEEEEEECCcee
Confidence 01122233444444 78999855 237888886654
No 313
>3c0t_A Mediator of RNA polymerase II transcription subunit 18; beta barrel, channel, protein-protein complex, activator, nucleus; 2.40A {Schizosaccharomyces pombe}
Probab=20.72 E-value=73 Score=31.96 Aligned_cols=39 Identities=21% Similarity=0.448 Sum_probs=32.2
Q ss_pred eeCHHHHHHHHHHcCCeEEEEeccccccceEEecCCeEEEEe
Q 002047 881 TFGPDRVMEFCNNNDLQLIVRAHECVMDGFERFAQGHLITLF 922 (975)
Q Consensus 881 ~fg~~~~~~fl~~~~l~~iiR~H~~~~~G~~~~~~~~~iTvf 922 (975)
.+....+-+|++..|+++. ||++.+||.+..++-.|+|+
T Consensus 103 ~~~sgdv~~fl~~lG~~~~---~EYv~~G~~f~~g~~kI~l~ 141 (207)
T 3c0t_A 103 KLTNGSVTEFVEKMGYEFS---HEYIIQGLEYFFFDTTVRIY 141 (207)
T ss_dssp EECSSCHHHHHHHTTEEEE---EEEEEEEEEEEETTEEEEEE
T ss_pred cccCCCHHHHHHHhCcceE---EEEEEeeeEEEeCCEEEEEE
Confidence 3455568899999999964 99999999999999777764
Done!